BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005687
(683 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224138132|ref|XP_002326526.1| predicted protein [Populus trichocarpa]
gi|222833848|gb|EEE72325.1| predicted protein [Populus trichocarpa]
Length = 835
Score = 601 bits (1550), Expect = e-169, Method: Compositional matrix adjust.
Identities = 330/571 (57%), Positives = 401/571 (70%), Gaps = 16/571 (2%)
Query: 103 PTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHI 162
PTGVGA L N GNTC+INAILQCFTHT+PLVQALRS +H PC TEGFCV+C LRDHI
Sbjct: 270 PTGVGAALFNKGNTCYINAILQCFTHTVPLVQALRSCNHEMPC--ITEGFCVLCVLRDHI 327
Query: 163 ELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESL 222
ELSL+SSGK+L P KLV+NL ISS F+RYQQEDAHEFLQCLL+RLE CLDS D+S
Sbjct: 328 ELSLSSSGKILEPLKLVNNLENISSVFRRYQQEDAHEFLQCLLERLERHCLDSSLTDDSA 387
Query: 223 SSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEK 282
SS NIV+RVFGG L+SKL+CCNCG CSD YEPLIDLSLEIED SL SALESFTK+EK
Sbjct: 388 SSHDKNIVERVFGGRLVSKLRCCNCGHCSDKYEPLIDLSLEIEDADSLQSALESFTKVEK 447
Query: 283 IEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELD 342
IED ETKFTCE CKE+VS EKQLMLD+ PSVAA HLK FK DG+ V KI KHV+FPLELD
Sbjct: 448 IEDSETKFTCESCKEEVSREKQLMLDQAPSVAALHLKIFKIDGTSVEKIGKHVQFPLELD 507
Query: 343 LKPYTSGGQNSD-VELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEE 401
LKPYT+ ++SD V KY LYA+V H G S GHYF YIRSSPDTWH+L+D V++ +E
Sbjct: 508 LKPYTNDNEDSDEVGFKYQLYAVVVHKGDSLMSGHYFCYIRSSPDTWHKLDDPEVSKEQE 567
Query: 402 EFVLSQDAYILFYAKQGTEWVSSLLEAESIGMNADISNSSPKSVLDNVENDYTSRSGVAN 461
EFVLSQ AYILFYA++GT W SSL++ + + + SN+SPKSVLDNV + T GV N
Sbjct: 568 EFVLSQAAYILFYAREGTPWCSSLIKPQELCSDPSNSNTSPKSVLDNVNRECT---GVGN 624
Query: 462 AESCKANEPSASAGDSSTKFSCQLRSIDLEVNETRDTVKGMSACFTLASCRNAAEHETRD 521
+S + N + +ST + + E +E+R KG + A+ N +
Sbjct: 625 NKSSETNVIKDAIEATSTHIPFERK---FEESESRVETKGNFVQISPANRPNFHRIVSIG 681
Query: 522 NTPMIDDASRPLSASDFY-GVFCNEKVNKLTSLEEDNCNPGVEKVKIVDGFHPLTPPRSP 580
TPM+ D S PL SD++ GV +E + S+EEDNCN G EK++I H TP RSP
Sbjct: 682 ETPMV-DVSVPLGVSDYHDGVLHDEMLCFPPSVEEDNCNQGAEKIEINGDLHSPTPHRSP 740
Query: 581 SPDIHSGKPRETYQVPREHLKLESKGACKTQLERNGKDLERQEAVRCIKKTMTGERYMKL 640
+PD G P +++ R+H K E++ CK ++ KD + EA+RCIK+ T R MKL
Sbjct: 741 TPD--KGLPEARHRILRDHQKGENRVNCKRSSKKVTKDSQTAEALRCIKRMPTA-RGMKL 797
Query: 641 MAAVNDVSLNRKRRLKSSPCKRFSPTRARRK 671
MAA+ + N K R +SSPCKR SP +R K
Sbjct: 798 MAAM--LPRNDKIRPRSSPCKRASPPGSRCK 826
>gi|224126461|ref|XP_002329560.1| predicted protein [Populus trichocarpa]
gi|222870269|gb|EEF07400.1| predicted protein [Populus trichocarpa]
Length = 809
Score = 583 bits (1503), Expect = e-163, Method: Compositional matrix adjust.
Identities = 319/578 (55%), Positives = 394/578 (68%), Gaps = 27/578 (4%)
Query: 103 PTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHI 162
PTGVGAGL N GNTC+INA+LQCFTHT+PLVQALRS +H PC TEGFC +C +RDHI
Sbjct: 258 PTGVGAGLFNKGNTCYINAVLQCFTHTVPLVQALRSCNHAMPC--RTEGFCALCVIRDHI 315
Query: 163 ELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESL 222
ELSLASSGK+L P KLV+NL+ ISSFF+RYQQEDAHEFLQCLL+RLE CLDS D+
Sbjct: 316 ELSLASSGKILEPLKLVNNLDSISSFFRRYQQEDAHEFLQCLLERLERSCLDSSLTDDIS 375
Query: 223 SSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEK 282
SSQ NIV+RVFGG L+SKL+CCNCG SD YEPLIDLSLEIED +L ALESFT +EK
Sbjct: 376 SSQDKNIVERVFGGRLVSKLRCCNCGHFSDKYEPLIDLSLEIEDADTLQIALESFTNVEK 435
Query: 283 IEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELD 342
IED ETKFTCE CKE+VS EKQLMLDK PS+AA HLKRFK DG+ V KI KHVEFPLELD
Sbjct: 436 IEDSETKFTCENCKEEVSREKQLMLDKAPSIAALHLKRFKIDGTSVEKIGKHVEFPLELD 495
Query: 343 LKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEE 402
LKPY + ++DV KY LYA+V H G S T GHY YIRSSPDTWH+L+D V++ EE
Sbjct: 496 LKPYINDNDSNDVGFKYQLYAVVVHKGYSLTSGHYVCYIRSSPDTWHKLDDPEVSKEREE 555
Query: 403 FVLSQDAYILFYAKQGTEWVSSLLEAESIGMNADISNSSPKSVLDNVENDYTSRSGVANA 462
FVLSQ AYILFYA++GT W SSL++ + ++ SN+SPKSVLDN ++ S VA+
Sbjct: 556 FVLSQAAYILFYAREGTPWCSSLIKPQEFCLDRSNSNTSPKSVLDNANSECIS---VADK 612
Query: 463 ESCKANEPSASAGDSSTKFSCQLRSIDLEVNETRDTVKGMSACFTLASCRNAAEHETRDN 522
+S + + + +ST C+ + E +R +G+S F + SC N
Sbjct: 613 DSLETSVIKDAVEATSTHIPCER---EFEEIVSRGETEGIS--FQI-SCANMV------- 659
Query: 523 TPMIDDASRPLSASDFYGVFCNEKVNKLTSLEEDNCNPGVEKVKIVDGFHPLTPPRSPSP 582
D S P SD + ++++ +EED N EK+ P PPRSP+
Sbjct: 660 -----DVSLPHGVSDGHDGVLHDEMLCFPPVEEDYSNQCAEKIGRKGDLRPSAPPRSPTS 714
Query: 583 DIHSGK-PRETYQVPREHLKLESKGACKTQLERNGKDLERQEAVRCIKKTMTGERYMKLM 641
D++SG+ P +PREHLK+E+ CK ++ KD + EA+RCIK+ T R MKLM
Sbjct: 715 DVYSGELPEARRCIPREHLKVENHVNCKRSSKKGTKDSQTAEALRCIKRMPTA-RGMKLM 773
Query: 642 AAVNDVSLNRKRRLKSSPCKRFSPTRARRKHNHGSVMR 679
AA+ + N K R +SSPCKR SP +RRK +V+R
Sbjct: 774 AAL--LPRNDKTRPRSSPCKRASPPGSRRKPIRVAVIR 809
>gi|255573501|ref|XP_002527676.1| conserved hypothetical protein [Ricinus communis]
gi|223532981|gb|EEF34747.1| conserved hypothetical protein [Ricinus communis]
Length = 753
Score = 541 bits (1394), Expect = e-151, Method: Compositional matrix adjust.
Identities = 316/590 (53%), Positives = 389/590 (65%), Gaps = 41/590 (6%)
Query: 103 PTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHI 162
PTGV AGL NLGNTCFINA+LQ FTHT+PLV+ALRS +H PC EGFC +CALRDHI
Sbjct: 175 PTGVAAGLYNLGNTCFINAVLQSFTHTVPLVKALRSCNHVMPCQRGVEGFCAVCALRDHI 234
Query: 163 ELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESL 222
ELSL SSGK +SP K+VDNL ISS F++YQQEDAHEFLQCLLD+LE CCLD DE+
Sbjct: 235 ELSLTSSGKAVSPSKIVDNLKQISSCFEKYQQEDAHEFLQCLLDKLERCCLDPGLSDEAS 294
Query: 223 SSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEK 282
SS +NIV+RVFGG L+SKL+CCNCG CSD YEPLIDLSLEIEDVG+L SALESFTK+EK
Sbjct: 295 SSPENNIVERVFGGRLVSKLRCCNCGHCSDKYEPLIDLSLEIEDVGNLQSALESFTKVEK 354
Query: 283 IEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELD 342
IED ++KF C CKE+ S EKQLMLD+ PSV+A HLKRFKTDGS++ KIDKHVEFPLEL+
Sbjct: 355 IEDVDSKFICNHCKEEGSREKQLMLDQAPSVSALHLKRFKTDGSFIEKIDKHVEFPLELN 414
Query: 343 LKPYTSGGQNSD---VELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRV 399
LKPYT Q+ + V+LKY LYAIV H G SPT GHYF ++RSSP TWH+L+D RV +V
Sbjct: 415 LKPYTKSSQDCNKNQVDLKYQLYAIVVHNGLSPTSGHYFCFVRSSPSTWHKLDDCRVVKV 474
Query: 400 EEEFVLSQDAYILFYAKQGTEWVSSLLEAESIGMNADISNSSPKSVLDNVENDYTSRSGV 459
EEE VLSQ AYILFY + GT W SSL+E E + ISN+SPKSVLD + T+
Sbjct: 475 EEEEVLSQAAYILFYVRDGTPWFSSLIELEKDSSDPSISNTSPKSVLDRMVTGSTACPLW 534
Query: 460 ANAESCKA-----NEPSASAGD---SSTKFSCQLRSIDLEVNETRDTVKGMSACFTLASC 511
N + CKA ++ S S D +S FSC E+N + +G+SA S
Sbjct: 535 ENFDQCKAESLDHHKSSVSISDVEKTSNHFSCVTVVEKDEINAIGNGAEGISAQILCGSG 594
Query: 512 RNAAE--HETRDNTPMIDDASRPLSASDFYGVFCNEKVNKLTSLEEDNCNPGVEKVKIVD 569
+ + +E+ + D S L A++ + + +EK+ + G VD
Sbjct: 595 NSGPKLCYESSRADVSMTDVSVSLEATNSHEILHDEKLGQ---------GAGTSGRNDVD 645
Query: 570 GFHPLTPPRSPSPDIH-SGKPRETYQVPREHLKLESKGACK--TQLERNGKDLERQEAVR 626
PL PPRS SPD++ G P + R+HLK+E K + RN R+EA+R
Sbjct: 646 ---PLMPPRSSSPDLNFGGVPSAKKHIRRDHLKVERLIDFKKPKKAMRN----HREEALR 698
Query: 627 CIKKTMTGERYMKLMAAV---NDVSLNRKRRLK--SSPCKRFSPTRARRK 671
+ K M R KL+ A+ ND +KRRL+ SS CK+ SP AR K
Sbjct: 699 YVSKNMAASRRSKLIDAILPQND----KKRRLRSSSSSCKQASPPGARSK 744
>gi|297742094|emb|CBI33881.3| unnamed protein product [Vitis vinifera]
Length = 547
Score = 518 bits (1334), Expect = e-144, Method: Compositional matrix adjust.
Identities = 302/545 (55%), Positives = 372/545 (68%), Gaps = 40/545 (7%)
Query: 144 PCDGATEGFCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQC 203
PC EGFCV+C LRDHIELSLASSG+ + P KLVDNLN ISS QRYQQEDAHEFLQC
Sbjct: 2 PCHSFYEGFCVLCTLRDHIELSLASSGRAIMPLKLVDNLNNISSSLQRYQQEDAHEFLQC 61
Query: 204 LLDRLESCCLDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE 263
LLDRL+S L +D+ S DN+V+ VFGG LISKL+CCNCG SDTYEPLIDLSLE
Sbjct: 62 LLDRLDSFYL--MNQDKGSHSPDDNLVKHVFGGYLISKLRCCNCGHISDTYEPLIDLSLE 119
Query: 264 IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKT 323
IEDV +L ALESFTK+EKIEDPE KFTC+ CKE+VSVEKQL+LD+VP VAAFHLKRFKT
Sbjct: 120 IEDVDTLPCALESFTKVEKIEDPEMKFTCDNCKEEVSVEKQLLLDQVPLVAAFHLKRFKT 179
Query: 324 DGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRS 383
DG+YV KIDKHVEFPLELDL PYT ++ +VELKY LYAIVEH G S T GHYFSYIRS
Sbjct: 180 DGTYVEKIDKHVEFPLELDLLPYTKEREDDNVELKYELYAIVEHTGFSSTSGHYFSYIRS 239
Query: 384 SPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEWVSSLLEAESIGMNADISNSSPK 443
SPDTWHRL+DS+VT V E++VL Q+AYILFYA+QGT W SSL++ + ++ + S +SPK
Sbjct: 240 SPDTWHRLDDSKVTSVPEDYVLHQEAYILFYARQGTPWFSSLMQTQKPCLDPNTSGNSPK 299
Query: 444 SVLDNVENDYTSRSGVANAESCKANEPSASAGDSSTKFSCQLRSIDLEVNETRDTVKGMS 503
SVLDNV++ TS +AN S +A+E +A + ST S R ++V+E D +
Sbjct: 300 SVLDNVDSISTSLPTLANVYSHEASETVDAADEISTCLSGGGRGDVVQVHEDGDVPHRVD 359
Query: 504 ACFTLA--SCRNAAEHETRDNTPMIDDASRPLSASDFYGVFCNEKVNKLTSLEEDNCNPG 561
L SC + T D+T I S D G N+ +N +NC
Sbjct: 360 TPMPLGVTSCFDG----TLDHTQNISTTS---PCRDHDG---NQHIN-------ENC--- 399
Query: 562 VEKVKIVDGFHPLTPPRSPSPDIHSGKPRE-TYQVPREHLKLESKGACKTQLERNGKDLE 620
K KI HP TPPRSPSPDI++ +P E +Y +PR HL+ +++ ACK L + +D
Sbjct: 400 --KSKI----HPQTPPRSPSPDIYAEEPPEVSYNIPRGHLRQKNQVACKKPLNKALEDSR 453
Query: 621 RQEAVRCIKKTMTGERYMKLMAAV----NDVSLNR---KRRLKSSPCKRFSPTRARRKHN 673
++EA + + K M R M+LMAA+ ++ SL + KRR++SS S TRARRK N
Sbjct: 454 KREACK-LCKNMPASRSMRLMAAMKGSQSEGSLGKKKSKRRMESS-ANGESNTRARRKSN 511
Query: 674 HGSVM 678
VM
Sbjct: 512 PCPVM 516
>gi|449462061|ref|XP_004148760.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Cucumis
sativus]
Length = 676
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 286/612 (46%), Positives = 378/612 (61%), Gaps = 64/612 (10%)
Query: 84 WGSSLLSRPVEKHWPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPR 143
W +S + P + + GAGL NLGNTCFINAILQC THT P V+ LRS +H
Sbjct: 100 WSTSEEAFPENSVSAQETESLSAGAGLANLGNTCFINAILQCLTHTAPFVEGLRSANHDM 159
Query: 144 PCDG----ATEGFCVICALRDHI---ELSLA-SSGKVLSPRKLVDNLNY----------- 184
PC+ T F + D + EL + V + +KL +L+
Sbjct: 160 PCNSKITVTTNTFSLFLGSNDSVVDEELRICIHRNFVFASKKLHLDLSKSEIKITTLALD 219
Query: 185 ISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDNIVQRVFGGCLISKLQC 244
SSFF RYQQEDAHEF+QC LD+LE C + S+ KD +SS+ D++V +VFGG LIS L C
Sbjct: 220 FSSFFWRYQQEDAHEFMQCFLDKLERCMV-SEGKDR-VSSEDDDLVNKVFGGRLISNLCC 277
Query: 245 CNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQ 304
CNCG CS+T+EPL+DLSLEIE+V SL SALESFTK+E+I DPETKF CE CKE+V VEKQ
Sbjct: 278 CNCGHCSETHEPLVDLSLEIENVDSLSSALESFTKVERIGDPETKFKCENCKEEVWVEKQ 337
Query: 305 LMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAI 364
L L+K+P V FHLKRFK D S+V KI+KH+EFPLELDLKPYT GG++++VELKY LYAI
Sbjct: 338 LKLEKIPLVTTFHLKRFKADSSFVEKIEKHLEFPLELDLKPYTLGGKDAEVELKYELYAI 397
Query: 365 VEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEWVSS 424
VEH G S T GHYFS++RSSPDTWHR++DS VT V EE+VLS++AYIL Y ++GT W SS
Sbjct: 398 VEHTGFSSTSGHYFSFVRSSPDTWHRMDDSLVTSVTEEYVLSREAYILLYKRKGTSWFSS 457
Query: 425 LLEAESIGMNADISNSSPKSVLDNVENDYTSRSGVANAESCKANEPSASAGDSSTKFSCQ 484
L++ +N+D SN SPKSVL N+ +S + + AN P+ + S +FSC+
Sbjct: 458 LIQRSDPCLNSDSSNPSPKSVLQNIGTGCSSFAAESKVNHESANAPADTLQPSPARFSCE 517
Query: 485 LRSIDLEVNETRDTVKGMSACFTLASCRNAAEHETRDNTPMIDDASRPLSASDFYGVFCN 544
+ + D V++ + ++ N E T ++P++ ++ L +D
Sbjct: 518 MENQDTGVSDLENAT---------SANLNIVESATMKSSPIV---TKDLCLND------- 558
Query: 545 EKVNKLTSLEEDNCNPGVEKVKIVDGFHPLTPPRSPSPDIHSGKPRETYQVPREHLKLES 604
ED + +DGFHPL+P RSPSPD P Y++P +HLK E
Sbjct: 559 ----------ED---------ESIDGFHPLSPVRSPSPDNVFRTPEPQYRIPVDHLKTEK 599
Query: 605 KGACKTQLERNGKDLERQEAVRCIKKTMTGERYMKLMAAV-----NDVSLNRKRRLKSSP 659
+ L + +D ER+ A+R +KK M G R K++AA+ SLN+K+RL+S P
Sbjct: 600 CSTSGSPLNKGVEDSERKAAMRYVKKNMPGSRGSKMIAAILGSQSEGSSLNKKKRLRSLP 659
Query: 660 CKRFSPTRARRK 671
CKR SP RRK
Sbjct: 660 CKRSSPPNTRRK 671
>gi|449517900|ref|XP_004165982.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Cucumis
sativus]
Length = 621
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 286/612 (46%), Positives = 378/612 (61%), Gaps = 64/612 (10%)
Query: 84 WGSSLLSRPVEKHWPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPR 143
W +S + P + + GAGL NLGNTCFINAILQC THT P V+ LRS +H
Sbjct: 45 WSTSEEAFPENSVSAQETESLSAGAGLANLGNTCFINAILQCLTHTAPFVEGLRSANHDM 104
Query: 144 PCDG----ATEGFCVICALRDHI---ELSLA-SSGKVLSPRKLVDNLNY----------- 184
PC+ T F + D + EL + V + +KL +L+
Sbjct: 105 PCNSKITVTTNTFSLFLGSNDSVVDEELRICIHRNFVFASKKLHLDLSKSEIKITTLALD 164
Query: 185 ISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDNIVQRVFGGCLISKLQC 244
SSFF RYQQEDAHEF+QC LD+LE C + S+ KD +SS+ D++V +VFGG LIS L C
Sbjct: 165 FSSFFWRYQQEDAHEFMQCFLDKLERCMV-SEGKDR-VSSEDDDLVNKVFGGRLISNLCC 222
Query: 245 CNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQ 304
CNCG CS+T+EPL+DLSLEIE+V SL SALESFTK+E+I DPETKF CE CKE+V VEKQ
Sbjct: 223 CNCGHCSETHEPLVDLSLEIENVDSLSSALESFTKVERIGDPETKFKCENCKEEVWVEKQ 282
Query: 305 LMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAI 364
L L+K+P V FHLKRFK D S+V KI+KH+EFPLELDLKPYT GG++++VELKY LYAI
Sbjct: 283 LKLEKIPLVTTFHLKRFKADSSFVEKIEKHLEFPLELDLKPYTLGGKDAEVELKYELYAI 342
Query: 365 VEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEWVSS 424
VEH G S T GHYFS++RSSPDTWHR++DS VT V EE+VLS++AYIL Y ++GT W SS
Sbjct: 343 VEHTGFSSTSGHYFSFVRSSPDTWHRMDDSLVTSVTEEYVLSREAYILLYKRKGTSWFSS 402
Query: 425 LLEAESIGMNADISNSSPKSVLDNVENDYTSRSGVANAESCKANEPSASAGDSSTKFSCQ 484
L++ +N+D SN SPKSVL N+ +S + + AN P+ + S +FSC+
Sbjct: 403 LIQRSDPCLNSDSSNPSPKSVLQNIGTGCSSFAAESKVNHESANAPADTLQPSPARFSCE 462
Query: 485 LRSIDLEVNETRDTVKGMSACFTLASCRNAAEHETRDNTPMIDDASRPLSASDFYGVFCN 544
+ + D V++ + ++ N E T ++P++ ++ L +D
Sbjct: 463 MENQDTGVSDLENAT---------SANLNIVESATTKSSPIV---TKDLCLND------- 503
Query: 545 EKVNKLTSLEEDNCNPGVEKVKIVDGFHPLTPPRSPSPDIHSGKPRETYQVPREHLKLES 604
ED + +DGFHPL+P RSPSPD P Y++P +HLK E
Sbjct: 504 ----------ED---------ESIDGFHPLSPVRSPSPDNVFRTPEPQYRIPVDHLKTEK 544
Query: 605 KGACKTQLERNGKDLERQEAVRCIKKTMTGERYMKLMAAV-----NDVSLNRKRRLKSSP 659
+ L + +D ER+ A+R +KK M G R K++AA+ SLN+K+RL+S P
Sbjct: 545 CSTSGSPLNKGVEDSERKAAMRYVKKNMPGSRGSKMIAAILGSQSEGSSLNKKKRLRSLP 604
Query: 660 CKRFSPTRARRK 671
CKR SP RRK
Sbjct: 605 CKRSSPPNTRRK 616
>gi|356529718|ref|XP_003533435.1| PREDICTED: uncharacterized protein LOC100808015 [Glycine max]
Length = 730
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 234/413 (56%), Positives = 294/413 (71%), Gaps = 16/413 (3%)
Query: 103 PTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHI 162
P+ +GAGL NLGNTCF+NAILQCFTHT+PLVQ LRS H PC G +GFCVICALR H+
Sbjct: 119 PSKMGAGLLNLGNTCFLNAILQCFTHTVPLVQGLRSSTHLIPCSGHKDGFCVICALRIHV 178
Query: 163 ELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESL 222
E SL + G LSP K V+NLNY SS F+RYQQEDAHEF+QC LD+LE C LD K +L
Sbjct: 179 ERSLVAPGGTLSPLKFVNNLNYFSSDFRRYQQEDAHEFMQCALDKLERCFLD--LKKSNL 236
Query: 223 SSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEK 282
+ + DN+V++VFGG ISKLQC CG S+T+EPLID+SLEI++V SL SALESFTK+E
Sbjct: 237 NFEDDNLVEKVFGGRFISKLQCSTCGHTSNTFEPLIDMSLEIDNVDSLPSALESFTKVEN 296
Query: 283 IEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELD 342
I++ F C+ CKE+VS+EKQLMLD+ PSVAA HLKRFKT+G V KIDKH++FPLELD
Sbjct: 297 IDE---NFRCDNCKEEVSMEKQLMLDQTPSVAALHLKRFKTNGILVEKIDKHIDFPLELD 353
Query: 343 LKPYTSGGQ-----NSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVT 397
L+PYT +DV LKY LYAIV H G S T GHYF ++RS+PDTWH+L+DS VT
Sbjct: 354 LQPYTIKVMEDLVAENDVPLKYDLYAIVVHTGLSSTSGHYFCFVRSAPDTWHKLDDSMVT 413
Query: 398 RVEEEFVLSQDAYILFYAKQGTEWVSSLLEAESIGMNADISNSSPKSVLDNVENDYTSRS 457
+V + VLSQ+AYILFYA+QGT W SS++E ++ ++ +I +SPKSVLD +N S+S
Sbjct: 414 KVSVDSVLSQEAYILFYARQGTPWFSSIMEEKTQCLDPNIMTTSPKSVLDVGDN--MSKS 471
Query: 458 G---VANAESCKANEPSASAGDSSTKFSCQLRSIDLEVNETRDTVKGMSACFT 507
+ N E A + S + + CQ LE+N+T D G +
Sbjct: 472 NPILLPNIERGVA-DVSKEYSEPRFDYYCQEDHNFLEINDTEDATHGFGQLLS 523
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 570 GFHPLTPPRSPSPDIHSGKPRETYQVPREHLKLESKGACKTQLER-NGKDLERQEAVRCI 628
GFH LTPP SP PD S K + R +LK E+ +CK + G ER+EAV+ +
Sbjct: 622 GFHSLTPPNSP-PDDASDK----FHNSRGNLKRENLRSCKRSSNKLTGVSEERREAVKYL 676
Query: 629 KKTMTGERYMKLMAAVNDVSLNRKRRLKSSPCKRFSPTRARRKHNHGSVMRRVA 682
K + + N V +++++ SS CK ++ +K NH SV VA
Sbjct: 677 CKNRSRRGLLLKFVTSNKVLDKKRKKMDSSQCK-----KSTKKSNHTSVSPPVA 725
>gi|357485233|ref|XP_003612904.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
gi|355514239|gb|AES95862.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
Length = 715
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 260/591 (43%), Positives = 342/591 (57%), Gaps = 51/591 (8%)
Query: 103 PTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHI 162
P +GAGL NLGNTCF+N+I+QCFTHT+PLV+ L H P DG GFCVICA R +
Sbjct: 149 PLMIGAGLANLGNTCFLNSIMQCFTHTVPLVEGLLLSCH-SPNDGHN-GFCVICAFRYQM 206
Query: 163 ELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESL 222
+ SL S+G+V+SP VDNL SS F+R+QQEDAHEF+QC LD+LE+C + +
Sbjct: 207 KQSLESTGRVISPVVFVDNLKQFSSDFRRHQQEDAHEFMQCALDKLETCFSNFEE----- 261
Query: 223 SSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEK 282
DNI ++VFGG L+SKL+CCNC S T E LIDLSLEIE+V S+ SALESFT +E
Sbjct: 262 ----DNIAKKVFGGSLVSKLRCCNCSRSSITNEQLIDLSLEIENVDSISSALESFTMVEN 317
Query: 283 IEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVV-KIDKHVEFPLEL 341
I+ K CE C E+VSVEKQLMLD+ PS+AAFHLKRFKT G+ V KIDKH+ FPLEL
Sbjct: 318 ID---AKLKCEGCNEEVSVEKQLMLDQTPSIAAFHLKRFKTVGNNAVEKIDKHINFPLEL 374
Query: 342 DLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEE 401
DL+PYT ++ + LKY LYA+V H G+S GHYF ++R++PDTWH+L+DS VT+V E
Sbjct: 375 DLQPYTILNESDNASLKYDLYAVVVHNGTSSDSGHYFCFVRTAPDTWHKLDDSMVTKVSE 434
Query: 402 EFVLSQDAYILFYAKQGTEWVSSLLEAESIGMNADISNSSPKSVLD---------NVEND 452
VLSQ+AYILFYA+QGT W SS E+ +N N+SPKSVLD ++ N+
Sbjct: 435 GTVLSQEAYILFYARQGTPWFSSFAESTIPCLNLSRMNTSPKSVLDITDGQDKSFSISNE 494
Query: 453 YTSRSGVANAESCKANEPSASAGDSSTKFSCQLRSIDLEVNETRDTVKGMSAC---FTLA 509
RSGV +S K +E S + S KF D V S C F
Sbjct: 495 NIERSGV--GKSKKNSEKSDYSCQQSRKFP------------ENDDVIDASPCRKQFPAG 540
Query: 510 SCRNAAEHETRDNTPMIDDASRPLSASDFYGVFCNEKVNKLTSLEEDNCNPGVEKVKIV- 568
H + + I P++ + G+ + ++ D +E +
Sbjct: 541 PSNQKTLH--LNGSEDISAQVLPVNYASPTGIAKPGGSSYAENVAPDKSKCSLEANDFIE 598
Query: 569 -DGFHPLTPPRSPSPDIHSGKPRETYQVPREHLKLESKG-ACKTQLERNGKDLERQEAVR 626
D F+ LTPP SP S P +++Q+ R+HLK E +G + K D + +A R
Sbjct: 599 NDVFNALTPPNSPP----SQTPGKSFQISRDHLKKEKQGISGKRSSSGKSSDNPQNKAAR 654
Query: 627 CIKKTMTGERYMKLMAAVNDVSLNRKRRLKSSPCKRFSPTRARRKHNHGSV 677
+ M G R + + D S KR+ S + AR+K H SV
Sbjct: 655 AYVRNMPGSRRGAFLDLLGD-SPENKRKKTGSSHSDKDSSSARKKSGHASV 704
>gi|297791015|ref|XP_002863392.1| ubiquitin-specific protease 21 [Arabidopsis lyrata subsp. lyrata]
gi|297309227|gb|EFH39651.1| ubiquitin-specific protease 21 [Arabidopsis lyrata subsp. lyrata]
Length = 724
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 210/396 (53%), Positives = 268/396 (67%), Gaps = 21/396 (5%)
Query: 53 LDKDQNNDDDDDYEEIYRDTRPISSSYGRYNWGSSLLSRPVEKHWPIQIKPTGVGAGLEN 112
++ DDDD +I T+P+ S+ W +I+PTGVGAGL N
Sbjct: 105 IENSDGQSDDDDLNKI-EPTKPLQLSW-----------------WYPRIEPTGVGAGLYN 146
Query: 113 LGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLASSGKV 172
GNTCFI ++LQCFTHT+PL+++LRS+ + PC+ E FCV+ ALRDHIEL+L SSG
Sbjct: 147 SGNTCFIASVLQCFTHTVPLIESLRSYMYQNPCNCGNEKFCVMQALRDHIELALRSSGHG 206
Query: 173 LSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDNIVQR 232
++ + DNL + SS F QEDAHEFLQ LD+LE CCLD K + S+ SQ NIV
Sbjct: 207 INIDRFRDNLTHFSSDFMINHQEDAHEFLQSFLDKLERCCLDPKNEPGSILSQDMNIVDN 266
Query: 233 VFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIEDPETKFTC 292
VFGG L+S L CCNC S S+T+EP + SLEIEDV +L SALESFT++EK+ED + TC
Sbjct: 267 VFGGGLMSTLCCCNCNSVSNTFEPSLGWSLEIEDVDNLWSALESFTRVEKLED---QLTC 323
Query: 293 EKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPYTSGGQN 352
+ CKE+V+ EKQL D++P VA FHLKRFK DG + KI +HVEFPLELDL P+ S QN
Sbjct: 324 DNCKEKVTKEKQLKFDQLPPVATFHLKRFKNDGVTMEKIFEHVEFPLELDLLPFMSSNQN 383
Query: 353 SDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYIL 412
+V KYHLYA VEH+G T GHY +Y+RS+P+TWH +DS+VTR+ E+ VLS+ AYIL
Sbjct: 384 PEVSTKYHLYAFVEHIGIGATFGHYSTYVRSAPETWHNFDDSKVTRISEDRVLSRPAYIL 443
Query: 413 FYAKQGTEWVSSLLEAESIGMNADISNSSPKSVLDN 448
FYA++GT W SS E A + SP SVL+N
Sbjct: 444 FYAREGTRWFSSTFEQLKAVFEATPLHFSPNSVLEN 479
>gi|11993482|gb|AAG42759.1|AF302669_1 ubiquitin-specific protease 21 [Arabidopsis thaliana]
Length = 737
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 203/352 (57%), Positives = 249/352 (70%), Gaps = 3/352 (0%)
Query: 97 WPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVIC 156
W +I+PTGVGAGL N GNTCFI ++LQCFTHT+PL+ +LRSF + PC+ E FCV+
Sbjct: 152 WYPRIEPTGVGAGLYNSGNTCFIASVLQCFTHTVPLIDSLRSFMYGNPCNCGNEKFCVMQ 211
Query: 157 ALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSK 216
ALRDHIEL+L SSG ++ + DNL Y SS F QEDAHEFLQ LD+LE CCLD K
Sbjct: 212 ALRDHIELALRSSGYGINIDRFRDNLTYFSSDFMINHQEDAHEFLQSFLDKLERCCLDPK 271
Query: 217 TKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALES 276
+ S+SSQ NIV VFGG L+S L CCNC S S+T+EP + SLEIEDV +L ALES
Sbjct: 272 NQLGSVSSQDLNIVDNVFGGGLMSTLCCCNCNSVSNTFEPSLGWSLEIEDVNTLWKALES 331
Query: 277 FTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVE 336
FT +EK+ED + TC+ CKE+V+ EKQL DK+P VA FHLKRF DG + KI H+E
Sbjct: 332 FTCVEKLED---QLTCDNCKEKVTKEKQLRFDKLPPVATFHLKRFTNDGVTMEKIFDHIE 388
Query: 337 FPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRV 396
FPLELDL P+ S + +V +YHLYA VEH+G T GHY SY+RS+P+TWH +DS+V
Sbjct: 389 FPLELDLSPFMSSNHDPEVSTRYHLYAFVEHIGIRATFGHYSSYVRSAPETWHNFDDSKV 448
Query: 397 TRVEEEFVLSQDAYILFYAKQGTEWVSSLLEAESIGMNADISNSSPKSVLDN 448
TR+ EE VLS+ AYILFYA++GT W SS E A + SP SVLDN
Sbjct: 449 TRISEERVLSRPAYILFYAREGTPWFSSTFEQLKTVFEATPLHFSPVSVLDN 500
>gi|18422708|ref|NP_568667.1| ubiquitin carboxyl-terminal hydrolase 21 [Arabidopsis thaliana]
gi|75262521|sp|Q9FIQ1.1|UBP21_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 21; AltName:
Full=Deubiquitinating enzyme 21; Short=AtUBP21; AltName:
Full=Ubiquitin thioesterase 21; AltName:
Full=Ubiquitin-specific-processing protease 21
gi|9758510|dbj|BAB08918.1| unnamed protein product [Arabidopsis thaliana]
gi|332008037|gb|AED95420.1| ubiquitin carboxyl-terminal hydrolase 21 [Arabidopsis thaliana]
Length = 732
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 203/352 (57%), Positives = 249/352 (70%), Gaps = 3/352 (0%)
Query: 97 WPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVIC 156
W +I+PTGVGAGL N GNTCFI ++LQCFTHT+PL+ +LRSF + PC+ E FCV+
Sbjct: 152 WYPRIEPTGVGAGLYNSGNTCFIASVLQCFTHTVPLIDSLRSFMYGNPCNCGNEKFCVMQ 211
Query: 157 ALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSK 216
ALRDHIEL+L SSG ++ + DNL Y SS F QEDAHEFLQ LD+LE CCLD K
Sbjct: 212 ALRDHIELALRSSGYGINIDRFRDNLTYFSSDFMINHQEDAHEFLQSFLDKLERCCLDPK 271
Query: 217 TKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALES 276
+ S+SSQ NIV VFGG L+S L CCNC S S+T+EP + SLEIEDV +L ALES
Sbjct: 272 NQLGSVSSQDLNIVDNVFGGGLMSTLCCCNCNSVSNTFEPSLGWSLEIEDVNTLWKALES 331
Query: 277 FTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVE 336
FT +EK+ED + TC+ CKE+V+ EKQL DK+P VA FHLKRF DG + KI H+E
Sbjct: 332 FTCVEKLED---QLTCDNCKEKVTKEKQLRFDKLPPVATFHLKRFTNDGVTMEKIFDHIE 388
Query: 337 FPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRV 396
FPLELDL P+ S + +V +YHLYA VEH+G T GHY SY+RS+P+TWH +DS+V
Sbjct: 389 FPLELDLSPFMSSNHDPEVSTRYHLYAFVEHIGIRATFGHYSSYVRSAPETWHNFDDSKV 448
Query: 397 TRVEEEFVLSQDAYILFYAKQGTEWVSSLLEAESIGMNADISNSSPKSVLDN 448
TR+ EE VLS+ AYILFYA++GT W SS E A + SP SVLDN
Sbjct: 449 TRISEERVLSRPAYILFYAREGTPWFSSTFEQLKTVFEATPLHFSPVSVLDN 500
>gi|357485235|ref|XP_003612905.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
gi|355514240|gb|AES95863.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
Length = 739
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 260/615 (42%), Positives = 343/615 (55%), Gaps = 75/615 (12%)
Query: 103 PTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHI 162
P +GAGL NLGNTCF+N+I+QCFTHT+PLV+ L H P DG GFCVICA R +
Sbjct: 149 PLMIGAGLANLGNTCFLNSIMQCFTHTVPLVEGLLLSCH-SPNDGHN-GFCVICAFRYQM 206
Query: 163 ELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESL 222
+ SL S+G+V+SP VDNL SS F+R+QQEDAHEF+QC LD+LE+C + +
Sbjct: 207 KQSLESTGRVISPVVFVDNLKQFSSDFRRHQQEDAHEFMQCALDKLETCFSNFEE----- 261
Query: 223 SSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEK 282
DNI ++VFGG L+SKL+CCNC S T E LIDLSLEIE+V S+ SALESFT +E
Sbjct: 262 ----DNIAKKVFGGSLVSKLRCCNCSRSSITNEQLIDLSLEIENVDSISSALESFTMVEN 317
Query: 283 IEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVV-KIDKHVEFPLEL 341
I+ K CE C E+VSVEKQLMLD+ PS+AAFHLKRFKT G+ V KIDKH+ FPLEL
Sbjct: 318 ID---AKLKCEGCNEEVSVEKQLMLDQTPSIAAFHLKRFKTVGNNAVEKIDKHINFPLEL 374
Query: 342 DLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDS------- 394
DL+PYT ++ + LKY LYA+V H G+S GHYF ++R++PDTWH+L+DS
Sbjct: 375 DLQPYTILNESDNASLKYDLYAVVVHNGTSSDSGHYFCFVRTAPDTWHKLDDSMVASAIL 434
Query: 395 -----------------RVTRVEEEFVLSQDAYILFYAKQGTEWVSSLLEAESIGMNADI 437
+VT+V E VLSQ+AYILFYA+QGT W SS E+ +N
Sbjct: 435 VPLGRDLIVLQITCLMIKVTKVSEGTVLSQEAYILFYARQGTPWFSSFAESTIPCLNLSR 494
Query: 438 SNSSPKSVLD---------NVENDYTSRSGVANAESCKANEPSASAGDSSTKFSCQLRSI 488
N+SPKSVLD ++ N+ RSGV +S K +E S + S KF
Sbjct: 495 MNTSPKSVLDITDGQDKSFSISNENIERSGV--GKSKKNSEKSDYSCQQSRKFP------ 546
Query: 489 DLEVNETRDTVKGMSAC---FTLASCRNAAEHETRDNTPMIDDASRPLSASDFYGVFCNE 545
D V S C F H + + I P++ + G+
Sbjct: 547 ------ENDDVIDASPCRKQFPAGPSNQKTLH--LNGSEDISAQVLPVNYASPTGIAKPG 598
Query: 546 KVNKLTSLEEDNCNPGVEKVKIV--DGFHPLTPPRSPSPDIHSGKPRETYQVPREHLKLE 603
+ ++ D +E + D F+ LTPP SP S P +++Q+ R+HLK E
Sbjct: 599 GSSYAENVAPDKSKCSLEANDFIENDVFNALTPPNSPP----SQTPGKSFQISRDHLKKE 654
Query: 604 SKG-ACKTQLERNGKDLERQEAVRCIKKTMTGERYMKLMAAVNDVSLNRKRRLKSSPCKR 662
+G + K D + +A R + M G R + + D S KR+ S
Sbjct: 655 KQGISGKRSSSGKSSDNPQNKAARAYVRNMPGSRRGAFLDLLGD-SPENKRKKTGSSHSD 713
Query: 663 FSPTRARRKHNHGSV 677
+ AR+K H SV
Sbjct: 714 KDSSSARKKSGHASV 728
>gi|297804390|ref|XP_002870079.1| hypothetical protein ARALYDRAFT_329738 [Arabidopsis lyrata subsp.
lyrata]
gi|297315915|gb|EFH46338.1| hypothetical protein ARALYDRAFT_329738 [Arabidopsis lyrata subsp.
lyrata]
Length = 1082
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 233/517 (45%), Positives = 317/517 (61%), Gaps = 38/517 (7%)
Query: 63 DDYEEIYRDTRP-ISSSYGRYNWGSSLLSRPVEKH---WPIQIKP-TGVGAGLENLGNTC 117
DD E +R P +S +G + + + + K +P + +P TGVGAGL NLGNTC
Sbjct: 511 DDLREAHRPWTPNVSPGFGSDDDDDNSKTESLRKSLFGFPQEPEPVTGVGAGLWNLGNTC 570
Query: 118 FINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLASSGKVLSPRK 177
F+N++ QCFTHT+PL+++LR++ + PC E FCVI ALR HIE +L ++P
Sbjct: 571 FLNSVFQCFTHTVPLIESLRAYKYEVPCHCGNEFFCVIRALRYHIEAALRPERCPIAPYY 630
Query: 178 LVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDNIVQRVFGGC 237
++NLNY S FQRYQQEDAHEFLQ L++LE C D ++ ++SSQ VF G
Sbjct: 631 FLNNLNYFSPDFQRYQQEDAHEFLQAFLEKLERCGSDRRSFHGNISSQD------VFAGR 684
Query: 238 LISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIEDPETKFTCEKCKE 297
LIS L+CCNC S S+T+E + LSLEIED +LGSALESFT++EK+++ + TC+ C E
Sbjct: 685 LISGLRCCNCNSVSETFEKSVGLSLEIEDADTLGSALESFTRVEKLDE---QLTCDTCNE 741
Query: 298 QVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVEL 357
+VS EKQ++LDK+P VA FHLKRFKT+G ++ KI KHV+ PLE+DL+PY Q ++V
Sbjct: 742 KVSKEKQMLLDKLPLVATFHLKRFKTNGFFMEKIFKHVKIPLEIDLQPYMRNSQENEVST 801
Query: 358 KYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQ 417
KYHLYA+VEH+G S GHY SY+RS+P WH +DS+VTR++E+ VLSQD+YILFYA++
Sbjct: 802 KYHLYALVEHLGYSVAYGHYSSYVRSAPKIWHHFDDSKVTRIDEDRVLSQDSYILFYARE 861
Query: 418 GTEWVSSLLEAESIGMNADISNSSPKSVLDNVENDYTSRSGVANAESCKANEPSASAGDS 477
GT W SS E + A + NSSPKSVLD+ N C +E S GD
Sbjct: 862 GTPWFSSAYEELQPLLEASLLNSSPKSVLDSSTNG-----------EC-LSEISYENGDK 909
Query: 478 STKFSCQLRSIDLEVNETRDTVKGMSACFTLASCRNAAEHETRDNTPMIDDASRPLSASD 537
S+K C + E +T++ +S T +A D+T + + PL D
Sbjct: 910 SSK-PCDSAGVSNEHVKTKEDFVSLSNELTEDVFLSAESSSGEDST--MGELLDPLETVD 966
Query: 538 FYGVFCNEKVNKLTSLEEDNCNPGVEKVKIVDGFHPL 574
Y C E E D+C +E+ VD F PL
Sbjct: 967 SYSP-CTEN-------EPDSC-LAIERATTVDDFFPL 994
>gi|2894598|emb|CAA17132.1| putative protein [Arabidopsis thaliana]
gi|7268541|emb|CAB78791.1| putative protein [Arabidopsis thaliana]
Length = 1082
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/372 (54%), Positives = 259/372 (69%), Gaps = 10/372 (2%)
Query: 104 TGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIE 163
TGVGAGL NLGN+CF+N++ QCFTHT+PL+++L SF + PC E FCVI A+R HIE
Sbjct: 559 TGVGAGLWNLGNSCFLNSVFQCFTHTVPLIESLLSFRYEVPCHCGNEFFCVIRAIRYHIE 618
Query: 164 LSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLS 223
+L ++P DNLNY S FQRYQQEDAHEFLQ L++LE C D S
Sbjct: 619 AALRPERCPIAPYFFFDNLNYFSPDFQRYQQEDAHEFLQAFLEKLEICGSDRT------S 672
Query: 224 SQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKI 283
+GD Q VF G LIS L+CCNC S+TYE + LSLEIEDV +LGSALESFT++EK+
Sbjct: 673 FRGDITSQDVFSGRLISGLRCCNCDYVSETYEKSVGLSLEIEDVDTLGSALESFTRVEKL 732
Query: 284 EDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDL 343
++ + TC+ C E+VS EKQL+LDK+P VA FHLKRFK +G Y+ KI KHV+ PLE+DL
Sbjct: 733 DE---QLTCDNCNEKVSKEKQLLLDKLPLVATFHLKRFKNNGLYMEKIYKHVKIPLEIDL 789
Query: 344 KPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
+PY Q ++V KYHLYA+VEH G S GHY SY+RS+P WH +DS+VTR++E+
Sbjct: 790 QPYMRNIQENEVSTKYHLYALVEHFGYSVAYGHYSSYVRSAPKIWHHFDDSKVTRIDEDM 849
Query: 404 VLSQDAYILFYAKQGTEWVSSLLEAESIGMNADISNSSPKSVLDNVENDYTSRSGVANAE 463
VLSQD+YILFYA++GT W SS+ E + A + NSSPKSVLD+ N S ++
Sbjct: 850 VLSQDSYILFYAREGTRWFSSVYEEMQPLVEASLLNSSPKSVLDSSTNG-ECLSEISYEN 908
Query: 464 SCKANEPSASAG 475
KA++P SAG
Sbjct: 909 GDKASKPCDSAG 920
>gi|18414985|ref|NP_567544.1| ubiquitin carboxyl-terminal hydrolase 20 [Arabidopsis thaliana]
gi|75262803|sp|Q9FPS7.1|UBP20_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 20; AltName:
Full=Deubiquitinating enzyme 20; Short=AtUBP20; AltName:
Full=Ubiquitin thioesterase 20; AltName:
Full=Ubiquitin-specific-processing protease 20
gi|11993480|gb|AAG42758.1|AF302668_1 ubiquitin-specific protease 20 [Arabidopsis thaliana]
gi|332658563|gb|AEE83963.1| ubiquitin carboxyl-terminal hydrolase 20 [Arabidopsis thaliana]
Length = 695
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 203/372 (54%), Positives = 259/372 (69%), Gaps = 10/372 (2%)
Query: 104 TGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIE 163
TGVGAGL NLGN+CF+N++ QCFTHT+PL+++L SF + PC E FCVI A+R HIE
Sbjct: 172 TGVGAGLWNLGNSCFLNSVFQCFTHTVPLIESLLSFRYEVPCHCGNEFFCVIRAIRYHIE 231
Query: 164 LSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLS 223
+L ++P DNLNY S FQRYQQEDAHEFLQ L++LE C D S
Sbjct: 232 AALRPERCPIAPYFFFDNLNYFSPDFQRYQQEDAHEFLQAFLEKLEICGSDRT------S 285
Query: 224 SQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKI 283
+GD Q VF G LIS L+CCNC S+TYE + LSLEIEDV +LGSALESFT++EK+
Sbjct: 286 FRGDITSQDVFSGRLISGLRCCNCDYVSETYEKSVGLSLEIEDVDTLGSALESFTRVEKL 345
Query: 284 EDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDL 343
++ + TC+ C E+VS EKQL+LDK+P VA FHLKRFK +G Y+ KI KHV+ PLE+DL
Sbjct: 346 DE---QLTCDNCNEKVSKEKQLLLDKLPLVATFHLKRFKNNGLYMEKIYKHVKIPLEIDL 402
Query: 344 KPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
+PY Q ++V KYHLYA+VEH G S GHY SY+RS+P WH +DS+VTR++E+
Sbjct: 403 QPYMRNIQENEVSTKYHLYALVEHFGYSVAYGHYSSYVRSAPKIWHHFDDSKVTRIDEDM 462
Query: 404 VLSQDAYILFYAKQGTEWVSSLLEAESIGMNADISNSSPKSVLDNVENDYTSRSGVANAE 463
VLSQD+YILFYA++GT W SS+ E + A + NSSPKSVLD+ N S ++
Sbjct: 463 VLSQDSYILFYAREGTRWFSSVYEEMQPLVEASLLNSSPKSVLDSSTNG-ECLSEISYEN 521
Query: 464 SCKANEPSASAG 475
KA++P SAG
Sbjct: 522 GDKASKPCDSAG 533
>gi|357143206|ref|XP_003572840.1| PREDICTED: uncharacterized protein LOC100831961 [Brachypodium
distachyon]
Length = 712
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 196/369 (53%), Positives = 248/369 (67%), Gaps = 6/369 (1%)
Query: 102 KPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDH 161
+P VGAGL N+GNTCF+NA LQC THT+PL + LRS DHP PC +GFC CAL++H
Sbjct: 164 RPQSVGAGLRNMGNTCFLNATLQCITHTVPLFKKLRSTDHPTPCSYDEDGFCSFCALKEH 223
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES 221
IE S+ SG VL P + DNL I +F+ QQEDAHEFL+CLLD L C LD K+K +
Sbjct: 224 IEESIRRSGSVLMPARFKDNLRSIL-YFRPGQQEDAHEFLRCLLDNLHKCTLDPKSKGKP 282
Query: 222 LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLE 281
S ++IV+RVFGG L S+L C CG CS+T EP +DLSLEI+ V L +ALESFTK+E
Sbjct: 283 SSFDEESIVKRVFGGQLKSQLTCRECGHCSETSEPFLDLSLEIDQVDDLVAALESFTKVE 342
Query: 282 KIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLEL 341
+I D E K TCE C QV K+L+LDK P V AF LKRF T + KIDKHV +P EL
Sbjct: 343 EIGDAENKLTCESCNVQVCKGKRLLLDKTPDVIAFQLKRFTTLDHSIEKIDKHVAYPSEL 402
Query: 342 DLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEE 401
DLKP+ S S+ ELKY LY +VEH G P GHY IRSSP TWH +NDS+V + E
Sbjct: 403 DLKPFHS-NPVSEEELKYDLYGVVEHSG-LPNYGHYVCAIRSSPSTWHLMNDSQVDSITE 460
Query: 402 EFVLSQDAYILFYAKQGT-EWVSSLLEAESIGMNADISNSSPKSVLDNVENDYTSRSGVA 460
L Q+AYILFY +QG W SSLLE E++ S +SP SVL++++ D ++ S ++
Sbjct: 461 TSALHQEAYILFYVRQGIFPWFSSLLE-EALHTET-TSGASPVSVLEDIDADCSTSSNIS 518
Query: 461 NAESCKANE 469
+ + + +E
Sbjct: 519 SGDKFEKDE 527
>gi|357517045|ref|XP_003628811.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
gi|355522833|gb|AET03287.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
Length = 737
Score = 362 bits (929), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 179/325 (55%), Positives = 230/325 (70%), Gaps = 16/325 (4%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAG+ N+GNTCF++AILQCFTHT+ + LR H CD EGFCVICA RDH++ +
Sbjct: 210 VGAGITNMGNTCFMSAILQCFTHTVQMFLGLRYCTHASSCD--VEGFCVICAFRDHLDDA 267
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
L S + PR+LV NLNY S+ F QEDAHEF+Q L++L+
Sbjct: 268 LERSRSPIVPRELVKNLNYFSAGFVIGNQEDAHEFMQYALNKLK----------RGFPVG 317
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+N++ ++FGG L+SKL+CC CG SD +EPLID+SLEIE V ++ ALESFTK+EK++
Sbjct: 318 EENLIDQIFGGRLVSKLRCCCCGHSSDKFEPLIDMSLEIEHVSTIQQALESFTKVEKMDG 377
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
KF C C ++V++EKQLMLDK PSVAAFHLKRF DG V KIDK+V+F ELDLKP
Sbjct: 378 ---KFICSDCNQEVTMEKQLMLDKAPSVAAFHLKRFLKDGDSVKKIDKYVDFSKELDLKP 434
Query: 346 YTSGGQNSD-VELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFV 404
YT G + D V LKY LYA+VEH G SP GHYFS++RS+PD W+ ++D +V+ V EE V
Sbjct: 435 YTCGSSSGDNVLLKYELYAVVEHRGPSPNSGHYFSFVRSAPDKWYLMDDDKVSSVSEEEV 494
Query: 405 LSQDAYILFYAKQGTEWVSSLLEAE 429
L++ AYILFYA+QGT W SS++E E
Sbjct: 495 LNRKAYILFYAQQGTPWFSSIVENE 519
>gi|413923519|gb|AFW63451.1| putative ubiquitin carboxyl-terminal hydrolase superfamily protein
[Zea mays]
Length = 591
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 189/365 (51%), Positives = 234/365 (64%), Gaps = 17/365 (4%)
Query: 96 HWPIQI----KPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEG 151
H P+ +P VGAGL N+GNTCF+NA LQC THT+PL LRS DH PC +G
Sbjct: 28 HSPLSFSYRSQPKSVGAGLSNMGNTCFLNATLQCITHTVPLFLKLRSTDHSTPCSYNKDG 87
Query: 152 FCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESC 211
FC CAL++H++ S+ SG V++P K DNL +SS F QQEDAHEFL+CLLD L C
Sbjct: 88 FCSFCALKEHVDESIQRSGSVIAPAKFRDNLRKLSSDFWPGQQEDAHEFLRCLLDNLHKC 147
Query: 212 CLDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLG 271
LD +K + S ++IV +FGG L S L CC CG S+T+EP +DLSLEI+ V L
Sbjct: 148 TLDPMSKGKGSSFDEESIVNEIFGGQLKSHLSCCECGHSSETFEPFLDLSLEIDQVDHLV 207
Query: 272 SALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKI 331
AL+SFTK+E+I D E K TCE C QVS KQL L + P V AFHLKRF T + V KI
Sbjct: 208 DALQSFTKVEQIGDSENKLTCESCNAQVSKNKQLTLHRAPDVIAFHLKRFTTLDNSVEKI 267
Query: 332 DKHVEFPLELDLKPY-----TSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPD 386
DKHV +PLE+DLKP+ T GG LKY LY +VEH G P GHY IRSSP
Sbjct: 268 DKHVVYPLEVDLKPFHSNPDTVGG------LKYDLYGVVEHSG-LPNYGHYTCTIRSSPS 320
Query: 387 TWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGT-EWVSSLLEAESIGMNADISNSSPKSV 445
TW+ +NDS+V + L+Q+AYILFY +QG W SSLLE + + SSP SV
Sbjct: 321 TWYFMNDSKVDSCTDSSALNQEAYILFYVRQGKFPWFSSLLEGKDALQAENTCGSSPVSV 380
Query: 446 LDNVE 450
L+N++
Sbjct: 381 LENID 385
>gi|222623479|gb|EEE57611.1| hypothetical protein OsJ_08002 [Oryza sativa Japonica Group]
Length = 672
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 184/360 (51%), Positives = 229/360 (63%), Gaps = 25/360 (6%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VG+GL N+GNTCF+N+ILQC THT+PL LRS DH PC +GFC CAL++HI+ S
Sbjct: 157 VGSGLGNMGNTCFLNSILQCVTHTVPLFLRLRSTDHCAPCSYDKDGFCSFCALKEHIDES 216
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
+ G QQEDAHEFL+CLLD L+ C D K KD+ S
Sbjct: 217 IRRPG----------------------QQEDAHEFLRCLLDNLDKCTTDPKPKDKPSSFD 254
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
++IV++VFGG L SKL CC CG CS+TYEP +DLSLEI+ +L ALESFTKLE+I D
Sbjct: 255 EESIVKQVFGGRLKSKLTCCECGHCSETYEPFLDLSLEIDQADNLIDALESFTKLERIGD 314
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E K CE C +V KQLMLD+ P V A HLKRF + V KIDKHV +PLELDLKP
Sbjct: 315 AEDKLNCEHCNAKVCKNKQLMLDRSPDVVAIHLKRFTSLDRSVEKIDKHVVYPLELDLKP 374
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
+ + + ELKY LY +VEH G SP+ GHY +RSSP TWH +NDS V + E L
Sbjct: 375 FHC-DPDINKELKYDLYGVVEHSG-SPSYGHYVCSVRSSPSTWHLMNDSHVDLISEASAL 432
Query: 406 SQDAYILFYAKQGT-EWVSSLLEAESIGMNADISNSSPKSVLDNVENDYTSRSGVANAES 464
+Q+ YILFY +QG +W SSLLE + + S +SP SVL+N++ D + SG A S
Sbjct: 433 NQEGYILFYIRQGKFQWFSSLLEQKDDLHPENTSGASPVSVLENIDVDCPTSSGEATNSS 492
>gi|218191394|gb|EEC73821.1| hypothetical protein OsI_08545 [Oryza sativa Indica Group]
Length = 672
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 184/360 (51%), Positives = 229/360 (63%), Gaps = 25/360 (6%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VG+GL N+GNTCF+N+ILQC THT+PL LRS DH PC +GFC CAL++HI+ S
Sbjct: 157 VGSGLGNMGNTCFLNSILQCVTHTVPLFLRLRSTDHCAPCSYDKDGFCSFCALKEHIDES 216
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
+ G QQEDAHEFL+CLLD L+ C D K KD+ S
Sbjct: 217 IRRPG----------------------QQEDAHEFLRCLLDNLDKCTTDPKPKDKPSSFD 254
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
++IV++VFGG L SKL CC CG CS+TYEP +DLSLEI+ +L ALESFTKLE+I D
Sbjct: 255 EESIVKQVFGGRLKSKLTCCECGHCSETYEPFLDLSLEIDQADNLIDALESFTKLERIGD 314
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E K CE C +V KQLMLD+ P V A HLKRF + V KIDKHV +PLELDLKP
Sbjct: 315 AEDKLNCEHCNAKVCKNKQLMLDRSPDVVAIHLKRFTSLDRSVEKIDKHVVYPLELDLKP 374
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
+ + + ELKY LY +VEH G SP+ GHY +RSSP TWH +NDS V + E L
Sbjct: 375 FHC-DPDINKELKYDLYGVVEHSG-SPSYGHYVCSVRSSPSTWHLMNDSHVDLISEASAL 432
Query: 406 SQDAYILFYAKQGT-EWVSSLLEAESIGMNADISNSSPKSVLDNVENDYTSRSGVANAES 464
+Q+ YILFY +QG +W SSLLE + + S +SP SVL+N++ D + SG A S
Sbjct: 433 NQEGYILFYIRQGKFQWFSSLLEQKDDLHPENTSGASPVSVLENIDVDCPTSSGEATNSS 492
>gi|413938346|gb|AFW72897.1| putative ubiquitin carboxyl-terminal hydrolase superfamily protein
[Zea mays]
Length = 531
Score = 323 bits (827), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 167/332 (50%), Positives = 217/332 (65%), Gaps = 3/332 (0%)
Query: 120 NAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLASSGKVLSPRKLV 179
NA LQC THT+PL L S DH PC +GFC CAL++H++ S+ SG V++P K
Sbjct: 5 NATLQCITHTVPLFLKLCSNDHFTPCSYNEDGFCSFCALKEHVDESIRRSGSVIAPTKFR 64
Query: 180 DNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDNIVQRVFGGCLI 239
D+L +S F QQEDAHEFL+CLLD L C LD K+K + S + ++IV+ +FGG L
Sbjct: 65 DSLRKLSLDFTPGQQEDAHEFLRCLLDNLHECTLDPKSKSKGSSFEEESIVKEIFGGQLK 124
Query: 240 SKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQV 299
S L CC CG S+T+EP +DLSLEI+ V L AL+SFTK+E++ D E K TCE C +V
Sbjct: 125 SHLSCCECGHSSETFEPFLDLSLEIDQVDHLVDALQSFTKVEQVGDSENKLTCESCNARV 184
Query: 300 SVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKY 359
KQL L + P V AFHLKRF T + V KIDK+V +PLE+DLKP+ S + ELKY
Sbjct: 185 CKNKQLTLYRAPDVIAFHLKRFTTLDNSVKKIDKYVAYPLEVDLKPFHSNPETVG-ELKY 243
Query: 360 HLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGT 419
LY +VEH G P GHY IRSSP TW+ +NDS V + + L+Q+AYILFY +QG
Sbjct: 244 DLYGVVEHSG-LPNYGHYVCTIRSSPSTWYLMNDSNVDSITDSSALNQEAYILFYVRQGK 302
Query: 420 -EWVSSLLEAESIGMNADISNSSPKSVLDNVE 450
W SSLLE + + + +SP SVL+N++
Sbjct: 303 FPWFSSLLEGKVVLQAENTCGTSPVSVLENID 334
>gi|413938345|gb|AFW72896.1| putative ubiquitin carboxyl-terminal hydrolase superfamily protein
[Zea mays]
Length = 463
Score = 321 bits (822), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 167/332 (50%), Positives = 217/332 (65%), Gaps = 3/332 (0%)
Query: 120 NAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLASSGKVLSPRKLV 179
NA LQC THT+PL L S DH PC +GFC CAL++H++ S+ SG V++P K
Sbjct: 5 NATLQCITHTVPLFLKLCSNDHFTPCSYNEDGFCSFCALKEHVDESIRRSGSVIAPTKFR 64
Query: 180 DNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDNIVQRVFGGCLI 239
D+L +S F QQEDAHEFL+CLLD L C LD K+K + S + ++IV+ +FGG L
Sbjct: 65 DSLRKLSLDFTPGQQEDAHEFLRCLLDNLHECTLDPKSKSKGSSFEEESIVKEIFGGQLK 124
Query: 240 SKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQV 299
S L CC CG S+T+EP +DLSLEI+ V L AL+SFTK+E++ D E K TCE C +V
Sbjct: 125 SHLSCCECGHSSETFEPFLDLSLEIDQVDHLVDALQSFTKVEQVGDSENKLTCESCNARV 184
Query: 300 SVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKY 359
KQL L + P V AFHLKRF T + V KIDK+V +PLE+DLKP+ S + ELKY
Sbjct: 185 CKNKQLTLYRAPDVIAFHLKRFTTLDNSVKKIDKYVAYPLEVDLKPFHSNPETVG-ELKY 243
Query: 360 HLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGT 419
LY +VEH G P GHY IRSSP TW+ +NDS V + + L+Q+AYILFY +QG
Sbjct: 244 DLYGVVEHSG-LPNYGHYVCTIRSSPSTWYLMNDSNVDSITDSSALNQEAYILFYVRQGK 302
Query: 420 -EWVSSLLEAESIGMNADISNSSPKSVLDNVE 450
W SSLLE + + + +SP SVL+N++
Sbjct: 303 FPWFSSLLEGKVVLQAENTCGTSPVSVLENID 334
>gi|168015744|ref|XP_001760410.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688424|gb|EDQ74801.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 312
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 147/309 (47%), Positives = 199/309 (64%), Gaps = 4/309 (1%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N++LQC T+T PL L S H C A GFC +CAL++H+ +LAS
Sbjct: 1 GLSNLGNTCFLNSVLQCLTYTPPLAGYLDSGQHKATCRAA--GFCAMCALQEHVRQALAS 58
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDN 228
SG +SP LV NL IS F+ ++QEDAHE+L+CL++ L +CCL K S SQ +
Sbjct: 59 SGGAVSPSTLVKNLRCISKSFRMWRQEDAHEYLRCLIEGLHNCCLPPGVKSNSAVSQERS 118
Query: 229 IVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIEDPET 288
++ ++FGG L S+++C C +CS+TY+PL+DLSLEI SL AL FT +E +E +
Sbjct: 119 LIHKIFGGRLRSQVKCTVCLTCSNTYDPLLDLSLEIVRADSLTKALNRFTAVEALEG-DN 177
Query: 289 KFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPYTS 348
K+ C C ++V KQ +DK P++ KRF + GS KIDK +EF LDLKPY S
Sbjct: 178 KYHCSHCNKKVRALKQFTIDKPPNILTIQFKRFSSTGSSGGKIDKKIEFGRTLDLKPYIS 237
Query: 349 GGQ-NSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQ 407
Q S + KY LYA++ H G S GHY+ ++R+ D WH L+DSRV +V E+ VL Q
Sbjct: 238 NPQVCSATDAKYSLYAVLVHAGWSTHSGHYYCFVRTKGDMWHALDDSRVKQVSEKSVLDQ 297
Query: 408 DAYILFYAK 416
AYILFY +
Sbjct: 298 KAYILFYIR 306
>gi|359495422|ref|XP_003634989.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 23-like [Vitis
vinifera]
Length = 997
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 156/391 (39%), Positives = 226/391 (57%), Gaps = 29/391 (7%)
Query: 72 TRPISSSYGRYNWGSSLLSRPVEKHWPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLP 131
T P +SS G+ GS + ++ I I +GAGLENLGNTCF+N++LQC T+T P
Sbjct: 72 TGPAASS-GKKQDGSDHVENGLDPELSIGITVRRIGAGLENLGNTCFLNSVLQCLTYTEP 130
Query: 132 LVQALRSFDHPRPCDGATEGFCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQR 191
L L+S H C A GFC +CA++ H+ +L S+G++L+P+ LV NL IS F+
Sbjct: 131 LAAYLQSGKHQNSCHIA--GFCALCAIQKHVSRALQSTGRILAPKDLVSNLRCISRNFRN 188
Query: 192 YQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCS 251
+QEDAHE++ LL+ + CCL S ES S+ ++V ++FGG L S+++C C CS
Sbjct: 189 ARQEDAHEYMVNLLETMHKCCLPSGVPSESPSAYEKSLVHKIFGGLLRSQVKCMQCSYCS 248
Query: 252 DTYEPLIDLSLEIEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVP 311
+ ++P +DLSLEI SL AL FT E+++ E ++ C++CK++V KQL + K P
Sbjct: 249 NKFDPFLDLSLEIFKADSLHKALMHFTATEQLDGGERQYQCQRCKQKVKALKQLTVHKAP 308
Query: 312 SVAAFHLKRFKTDGSY--VVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMG 369
V HLKRF G++ KIDK V F +DLKP+ SG + LKY LY ++ H G
Sbjct: 309 YVLTIHLKRF---GAHDPGQKIDKKVHFGPTMDLKPFVSGSYEEN--LKYTLYGVLVHAG 363
Query: 370 SSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEWVSSLLEAE 429
S GHY+ ++R+S W+ L+D+RV +V E VL Q AY+LFY +
Sbjct: 364 WSTHSGHYYCFVRTSTGMWYSLDDNRVVQVSERTVLDQKAYMLFYVR------------- 410
Query: 430 SIGMNADISNSSPKSVLDNVENDYTSRSGVA 460
D N +PK +D V+ S +A
Sbjct: 411 ------DRKNFTPKKSIDVVQKQNLVASAIA 435
>gi|357143373|ref|XP_003572898.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 23-like
[Brachypodium distachyon]
Length = 1051
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 134/311 (43%), Positives = 205/311 (65%), Gaps = 5/311 (1%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
+GAGL+NLGNTC++N++LQC T+T P V L+S H C T GFC +CAL++H+ +
Sbjct: 80 IGAGLQNLGNTCYLNSVLQCLTYTEPFVAYLQSGKHKSSC--RTAGFCALCALQNHVRCA 137
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
L S+GK+L+P + V NL IS F+ Y+QEDAHE + LL+ + CCL S +S S+
Sbjct: 138 LQSTGKILTPMQFVKNLRCISRSFRNYRQEDAHELMVNLLESMHKCCLPSGMPSQSPSAY 197
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
++V R+FGG L S+++C +C CS ++P +DLSLEI + +L AL++FT+ E ++D
Sbjct: 198 EKSLVHRIFGGRLRSQVKCVSCSHCSSKFDPFLDLSLEIANAATLVKALQNFTEEELLDD 257
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E ++ C+ C+++V+ +K+ +DK P V HLKRF KIDK V+F LDLKP
Sbjct: 258 GEKQYNCQHCRQKVAAKKRFTIDKAPDVLTIHLKRFSPFNPR-HKIDKKVDFQPTLDLKP 316
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
+ S + D++ +Y+LY ++ H G + GHY+ ++R+S WH L+D++V +V E VL
Sbjct: 317 FVSNSE--DMDFRYNLYGVLVHAGWNTQAGHYYCFVRTSSGMWHNLDDNQVHQVREADVL 374
Query: 406 SQDAYILFYAK 416
Q AY+LFY +
Sbjct: 375 RQKAYMLFYVR 385
>gi|296088835|emb|CBI38293.3| unnamed protein product [Vitis vinifera]
Length = 520
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 155/389 (39%), Positives = 223/389 (57%), Gaps = 25/389 (6%)
Query: 72 TRPISSSYGRYNWGSSLLSRPVEKHWPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLP 131
T P +SS G+ GS + ++ I I +GAGLENLGNTCF+N++LQC T+T P
Sbjct: 72 TGPAASS-GKKQDGSDHVENGLDPELSIGITVRRIGAGLENLGNTCFLNSVLQCLTYTEP 130
Query: 132 LVQALRSFDHPRPCDGATEGFCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQR 191
L L+S H C A GFC +CA++ H+ +L S+G++L+P+ LV NL IS F+
Sbjct: 131 LAAYLQSGKHQNSCHIA--GFCALCAIQKHVSRALQSTGRILAPKDLVSNLRCISRNFRN 188
Query: 192 YQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCS 251
+QEDAHE++ LL+ + CCL S ES S+ ++V ++FGG L S+++C C CS
Sbjct: 189 ARQEDAHEYMVNLLETMHKCCLPSGVPSESPSAYEKSLVHKIFGGLLRSQVKCMQCSYCS 248
Query: 252 DTYEPLIDLSLEIEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVP 311
+ ++P +DLSLEI SL AL FT E+++ E ++ C++CK++V KQL + K P
Sbjct: 249 NKFDPFLDLSLEIFKADSLHKALMHFTATEQLDGGERQYQCQRCKQKVKALKQLTVHKAP 308
Query: 312 SVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSS 371
V HLKRF KIDK V F +DLKP+ SG + LKY LY ++ H G S
Sbjct: 309 YVLTIHLKRFGAHDP-GQKIDKKVHFGPTMDLKPFVSGSYEEN--LKYTLYGVLVHAGWS 365
Query: 372 PTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEWVSSLLEAESI 431
GHY+ ++R+S W+ L+D+RV +V E VL Q AY+LFY +
Sbjct: 366 THSGHYYCFVRTSTGMWYSLDDNRVVQVSERTVLDQKAYMLFYVR--------------- 410
Query: 432 GMNADISNSSPKSVLDNVENDYTSRSGVA 460
D N +PK +D V+ S +A
Sbjct: 411 ----DRKNFTPKKSIDVVQKQNLVASAIA 435
>gi|302142802|emb|CBI20097.3| unnamed protein product [Vitis vinifera]
Length = 915
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 155/391 (39%), Positives = 225/391 (57%), Gaps = 29/391 (7%)
Query: 72 TRPISSSYGRYNWGSSLLSRPVEKHWPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLP 131
T P +SS G+ GS + ++ I I +GAGLENLGNTC++N++LQC T+T P
Sbjct: 73 TGPAASS-GKKQDGSDHVENGLDPELSIGITFRRIGAGLENLGNTCYLNSVLQCLTYTEP 131
Query: 132 LVQALRSFDHPRPCDGATEGFCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQR 191
L L+S H C A GFC +CA++ H+ +L S+G++L P+ LV NL IS F+
Sbjct: 132 LAAYLQSGKHQNSCRIA--GFCALCAIQKHVSRALQSTGRILVPKDLVSNLRCISRNFRN 189
Query: 192 YQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCS 251
+QEDAHE++ LL+ + CCL S ES S+ ++V ++FGG L S+++C C CS
Sbjct: 190 ARQEDAHEYMVHLLETMHKCCLPSGVPSESPSAYEKSLVHKIFGGLLRSQVKCMQCSYCS 249
Query: 252 DTYEPLIDLSLEIEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVP 311
+ ++P +DLSLEI SL AL FT E+++ E ++ C++CK++V KQL + K P
Sbjct: 250 NKFDPFLDLSLEIFKADSLHKALVHFTATEQLDGGERQYQCQRCKQKVKALKQLTVHKAP 309
Query: 312 SVAAFHLKRFKTDGSY--VVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMG 369
V HLKRF G++ KIDK V F +DLKP+ SG + LKY LY ++ H G
Sbjct: 310 YVLTIHLKRF---GAHDPGQKIDKKVHFGPTMDLKPFVSGSYEEN--LKYTLYGVLVHAG 364
Query: 370 SSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEWVSSLLEAE 429
S GHY+ ++R+S W+ L+D+RV +V E VL Q AY+LFY +
Sbjct: 365 WSTHSGHYYCFVRTSTGMWYSLDDNRVVQVSERTVLDQKAYMLFYVR------------- 411
Query: 430 SIGMNADISNSSPKSVLDNVENDYTSRSGVA 460
D N +PK +D V+ S +A
Sbjct: 412 ------DRKNFTPKKSIDVVQKQNLVVSAIA 436
>gi|225461822|ref|XP_002283705.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 23-like [Vitis
vinifera]
Length = 955
Score = 285 bits (728), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 147/347 (42%), Positives = 213/347 (61%), Gaps = 10/347 (2%)
Query: 72 TRPISSSYGRYNWGSSLLSRPVEKHWPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLP 131
T P +SS G+ GS + ++ I I +GAGLENLGNTC++N++LQC T+T P
Sbjct: 73 TGPAASS-GKKQDGSDHVENGLDPELSIGITFRRIGAGLENLGNTCYLNSVLQCLTYTEP 131
Query: 132 LVQALRSFDHPRPCDGATEGFCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQR 191
L L+S H C A GFC +CA++ H+ +L S+G++L P+ LV NL IS F+
Sbjct: 132 LAAYLQSGKHQNSCRIA--GFCALCAIQKHVSRALQSTGRILVPKDLVSNLRCISRNFRN 189
Query: 192 YQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCS 251
+QEDAHE++ LL+ + CCL S ES S+ ++V ++FGG L S+++C C CS
Sbjct: 190 ARQEDAHEYMVHLLETMHKCCLPSGVPSESPSAYEKSLVHKIFGGLLRSQVKCMQCSYCS 249
Query: 252 DTYEPLIDLSLEIEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVP 311
+ ++P +DLSLEI SL AL FT E+++ E ++ C++CK++V KQL + K P
Sbjct: 250 NKFDPFLDLSLEIFKADSLHKALVHFTATEQLDGGERQYQCQRCKQKVKALKQLTVHKAP 309
Query: 312 SVAAFHLKRFKTDGSY--VVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMG 369
V HLKRF G++ KIDK V F +DLKP+ SG + LKY LY ++ H G
Sbjct: 310 YVLTIHLKRF---GAHDPGQKIDKKVHFGPTMDLKPFVSGSYEEN--LKYTLYGVLVHAG 364
Query: 370 SSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAK 416
S GHY+ ++R+S W+ L+D+RV +V E VL Q AY+LFY +
Sbjct: 365 WSTHSGHYYCFVRTSTGMWYSLDDNRVVQVSERTVLDQKAYMLFYVR 411
>gi|413952907|gb|AFW85556.1| putative ubiquitin carboxyl-terminal hydrolase superfamily protein
[Zea mays]
Length = 903
Score = 285 bits (728), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 136/311 (43%), Positives = 203/311 (65%), Gaps = 5/311 (1%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
+GAGLENLGNTC++N++LQC T+T P L+S H C T GFC +CAL+ H++ +
Sbjct: 88 IGAGLENLGNTCYLNSVLQCLTYTEPFAAYLQSGKHTSSCR--TSGFCALCALQIHVKTA 145
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
L S+GK+++P ++V NL IS F+ +QEDAHE + LL+ + CCL S ES S+
Sbjct: 146 LESTGKIVTPFRIVKNLRCISRTFRNSRQEDAHELMVNLLESMHKCCLPSGVSTESQSAY 205
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
++V ++FGG L S+++C C CS+ ++P +DLSLEI +L ALE+FT+ E +++
Sbjct: 206 DKSLVHKIFGGRLRSQVKCTRCLHCSNKFDPFLDLSLEIAKATTLVRALENFTEDELLDE 265
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
+ ++ CE+C+++V +K+L +DK P+V HLKRF + + KIDK V+F LDLKP
Sbjct: 266 GQKEYECERCRQKVVAKKRLTIDKAPNVLTIHLKRF-SPFNPREKIDKKVDFQSILDLKP 324
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
+ S + +D KY LY ++ H G S GHY+ Y+R+S WH L+D V +V E VL
Sbjct: 325 FVSDSKGTD--FKYSLYGVLVHTGWSTQSGHYYCYVRTSSGMWHNLDDKEVRQVREADVL 382
Query: 406 SQDAYILFYAK 416
Q AY+LFY +
Sbjct: 383 KQKAYMLFYVR 393
>gi|356564905|ref|XP_003550687.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 23-like [Glycine
max]
Length = 903
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 139/311 (44%), Positives = 199/311 (63%), Gaps = 5/311 (1%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
+GAGL NLGNTCF+N++LQC T+T PL L+S H C A GFC +CA+++H+ +
Sbjct: 96 IGAGLRNLGNTCFLNSVLQCLTYTEPLAAYLQSGKHKTSCHVA--GFCALCAIQNHVSRA 153
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
L S+G++L+P LV NL IS F+ +QEDAHE++ LL+ + CCL S ES +
Sbjct: 154 LQSTGRILAPEDLVGNLRCISRNFRNARQEDAHEYMVNLLECMHKCCLPSGIPSESPGAY 213
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+ V ++FGG L S+++C C CS+ ++P +DLSLEI SL AL +FT E ++
Sbjct: 214 EKSFVHKIFGGRLRSQVKCHQCSYCSNKFDPFLDLSLEIFKADSLQKALSNFTAAEWLDG 273
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E ++ C++CK++V KQL + K P V HLKRF + KI K V+F LDLKP
Sbjct: 274 GEKEYHCQRCKQKVKALKQLTIHKAPYVLTIHLKRFHAHDT-GQKIKKKVQFGCALDLKP 332
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
+ SG + DV KY LY ++ H GSS GHY+ Y+R+S + W+ L+D+RV+ V E VL
Sbjct: 333 FVSGSNDGDV--KYSLYGVLVHAGSSTHSGHYYCYVRTSNNMWYTLDDNRVSHVSEREVL 390
Query: 406 SQDAYILFYAK 416
+Q AY+LFY +
Sbjct: 391 NQQAYMLFYVR 401
>gi|242094960|ref|XP_002437970.1| hypothetical protein SORBIDRAFT_10g005680 [Sorghum bicolor]
gi|241916193|gb|EER89337.1| hypothetical protein SORBIDRAFT_10g005680 [Sorghum bicolor]
Length = 917
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 131/311 (42%), Positives = 204/311 (65%), Gaps = 5/311 (1%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
+GAGLENLGNTC++N++LQC T+T P L+S H C + GFC +CAL++H++ +
Sbjct: 88 IGAGLENLGNTCYLNSVLQCLTYTEPFAAYLQSGKHKSSCRAS--GFCALCALQNHVKTA 145
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
L S+GK+++P ++V NL IS F+ +QEDAHE + LL+ + CCL S ES S+
Sbjct: 146 LESTGKIVTPFRIVKNLRCISRTFRNSRQEDAHELMVNLLESMHKCCLPSGVPSESQSAY 205
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
++V ++FGG L S+++C C CS+ ++P +DLSL+I +L ALE+FT+ E ++
Sbjct: 206 DKSLVHKIFGGRLRSQVKCTRCSHCSNKFDPFLDLSLDIAKATTLVRALENFTEDELLDG 265
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
+ ++ CE+C+++V +K+ +DK P+V HLKRF + + KIDK V+F LDLKP
Sbjct: 266 GQKQYQCERCRQKVVAKKRFTIDKAPNVLTIHLKRF-SPFNPREKIDKKVDFQPSLDLKP 324
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
+ S + +D KY LY ++ H G + GHY+ ++R+S WH L+D++V +V E VL
Sbjct: 325 FVSDSKGTD--FKYSLYGVLVHTGWNTQSGHYYCFVRTSSGMWHNLDDNKVRQVREADVL 382
Query: 406 SQDAYILFYAK 416
Q AY+LFY +
Sbjct: 383 KQKAYMLFYVR 393
>gi|357125023|ref|XP_003564195.1| PREDICTED: uncharacterized protein LOC100826635 [Brachypodium
distachyon]
Length = 895
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 132/311 (42%), Positives = 205/311 (65%), Gaps = 5/311 (1%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
+GAGL+NLGNTC++N++LQC T+T P L+S H C T GFC +CAL++H++ +
Sbjct: 51 IGAGLQNLGNTCYLNSVLQCLTYTEPFAAYLQSGRHKSSC--RTAGFCALCALQNHVKTA 108
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
L S+GK+++P ++V NL IS F+ +QEDAHE + LL+ + CCL S ES S+
Sbjct: 109 LQSTGKIVTPSQIVKNLRCISRSFRNSRQEDAHELMVNLLESMHKCCLPSGVPSESPSAY 168
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
++V R+FGG L S+++C C CS+ ++P +DLSL+I +L AL++FT+ E ++
Sbjct: 169 EKSLVHRIFGGRLRSQVKCTRCSHCSNKFDPFLDLSLDIAKASNLVRALQNFTEDELLDG 228
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
+ ++ CE+C+++V +K+ +D+ P+V HLKRF + + KIDK V+F LDLKP
Sbjct: 229 GQKQYQCERCRQKVVAKKRFTIDRAPNVLTIHLKRF-SPFNPRDKIDKKVDFQPVLDLKP 287
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
+ S + SD KY LY ++ H G + CGHY+ ++R+S WH L+D++V +V E VL
Sbjct: 288 FVSDSKVSD--YKYSLYGVLVHAGWNTQCGHYYCFVRTSSGMWHNLDDNQVRQVREADVL 345
Query: 406 SQDAYILFYAK 416
Q AY+LFY +
Sbjct: 346 KQKAYMLFYVR 356
>gi|356498762|ref|XP_003518218.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 23-like [Glycine
max]
Length = 879
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 139/311 (44%), Positives = 198/311 (63%), Gaps = 5/311 (1%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
+GAGL NLGNTCF+N++LQC T+T PL L+S H C A GFC +CA+++H+ +
Sbjct: 93 IGAGLRNLGNTCFLNSVLQCLTYTEPLAAYLQSGKHKTSCHVA--GFCALCAIQNHVSRA 150
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
L S+G++LSP LV NL IS F+ +QEDAHE++ LL+ + CCL S ES +
Sbjct: 151 LQSTGRILSPEDLVGNLRCISRNFRNARQEDAHEYMVNLLECMHKCCLPSGIPSESPGAY 210
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+ V ++FGG L S+++C C CS+ ++P +DLSLEI SL AL +FT E ++
Sbjct: 211 EKSFVHKIFGGRLRSQVKCHQCSYCSNKFDPFLDLSLEIFKADSLQKALSNFTAAEWLDG 270
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E ++ C++CK++V KQL + K P V HLKRF KI K ++F LDLKP
Sbjct: 271 GEKEYHCQRCKQKVRALKQLTIHKAPYVLTIHLKRFHAHDP-GQKIKKKIQFGCALDLKP 329
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
+ SG + DV KY LY ++ H GSS GHY+ Y+R+S + W+ L+D+RV+ V E VL
Sbjct: 330 FVSGSYDGDV--KYSLYGVLVHAGSSTHSGHYYCYVRTSNNMWYTLDDNRVSHVSEREVL 387
Query: 406 SQDAYILFYAK 416
+Q AY+LFY +
Sbjct: 388 NQQAYMLFYVR 398
>gi|255584453|ref|XP_002532957.1| conserved hypothetical protein [Ricinus communis]
gi|223527267|gb|EEF29423.1| conserved hypothetical protein [Ricinus communis]
Length = 834
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 146/359 (40%), Positives = 213/359 (59%), Gaps = 11/359 (3%)
Query: 107 GAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSL 166
GAGLENLGNTCF+N++LQC T+T PL L+S H C A GFC +CA++ H+ +L
Sbjct: 6 GAGLENLGNTCFLNSVLQCLTYTEPLAAYLQSGKHQTSCHIA--GFCALCAIQKHVSRAL 63
Query: 167 ASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQG 226
S+G+ L P+ LV NL IS F+ +QEDAHE++ LL+ + CCL S ES ++
Sbjct: 64 QSTGRSLVPKDLVSNLRCISRNFRNARQEDAHEYMVNLLESMHKCCLPSGVPSESPAAYE 123
Query: 227 DNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIEDP 286
++V ++FGG L S+++C C CS+ ++P +DLSLEI +L AL +FT E ++
Sbjct: 124 KSLVHKIFGGRLRSQVECQQCSYCSNKFDPFLDLSLEIVKADTLPVALRNFTAAELLDGG 183
Query: 287 ETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPY 346
E + C+KCK++V +K+L + P+V HLKRF K+DK V F LD+KP+
Sbjct: 184 EKHYQCQKCKQKVRAKKRLTVHNAPNVLTIHLKRFHAHDPG-RKVDKKVLFDHSLDMKPF 242
Query: 347 TSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLS 406
SG D LKY LY ++ H G S GHY +IR+S WH LND+ V V E+ VL
Sbjct: 243 VSGSYEGD--LKYSLYGVLVHFGHSTHSGHYVCFIRTSSGIWHLLNDNEVRPVSEKVVLD 300
Query: 407 QDAYILFYAK----QGTEWVSSLLEAESIGMNADISNSSPKSVLDNVENDYTSRSGVAN 461
Q AY+LFY + T+ + ++ E++ A IS++ P VL + ++ + N
Sbjct: 301 QKAYMLFYVRDRKANATKRPADVVRKENV--KASISSNLPNLVLKQMSKEHIDNGLIGN 357
>gi|115449203|ref|NP_001048381.1| Os02g0795000 [Oryza sativa Japonica Group]
gi|47497222|dbj|BAD19267.1| putative hematopoietic-specific IL-2 deubiquitinating enzyme [Oryza
sativa Japonica Group]
gi|113537912|dbj|BAF10295.1| Os02g0795000 [Oryza sativa Japonica Group]
Length = 1185
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 138/333 (41%), Positives = 211/333 (63%), Gaps = 7/333 (2%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
+GAGL+N GNTC++N++LQC T+T P V L+S +H C T GFC +CAL+ H+ +
Sbjct: 84 IGAGLQNFGNTCYLNSVLQCLTYTEPFVAYLQSGEHMSSCR--TIGFCALCALQRHVNSA 141
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
L S+GK+L P +V NL IS F+ +QEDAHE + LL+ + CCL S S S+
Sbjct: 142 LQSTGKILRPVHIVRNLRCISRSFRISRQEDAHELMVSLLESMHKCCLPSGVPSGSPSAY 201
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
++V R+FGG L S+++C C CS+ ++P +DLSLEI + +L AL+ FT E ++
Sbjct: 202 EKSLVHRIFGGLLRSQVRCTTCSHCSNKFDPFLDLSLEIANAATLVKALQHFTAEELLDG 261
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E ++ CE C+++V +K+ M++K PSV HLKRF + + KIDK V+F L+LKP
Sbjct: 262 GEKQYNCEHCRQKVVAKKRFMIEKAPSVLTIHLKRF-SPFNPRHKIDKKVQFQPTLNLKP 320
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
Y S + +E KY LY ++ H G + GHY+ ++R+S WH L+D++V +V E VL
Sbjct: 321 YVSNPEG--MEFKYSLYGVLVHAGWNTQSGHYYCFVRTSSGIWHNLDDNKVYQVREADVL 378
Query: 406 SQDAYILFYAKQGTEWVSSLLEAESIGMNADIS 438
Q AY+LFY + T SS++ +++ +N ++
Sbjct: 379 RQKAYMLFYVRDRTR--SSVMYSDNCTVNLSVN 409
>gi|115466786|ref|NP_001056992.1| Os06g0184300 [Oryza sativa Japonica Group]
gi|55773912|dbj|BAD72517.1| putative ubiquitin-specific protease 23 [Oryza sativa Japonica
Group]
gi|113595032|dbj|BAF18906.1| Os06g0184300 [Oryza sativa Japonica Group]
Length = 899
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 131/311 (42%), Positives = 202/311 (64%), Gaps = 5/311 (1%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
+GAGL+NLGNTC++N++LQC T+T P L+S H C T GFC +CAL++H++ +
Sbjct: 57 IGAGLQNLGNTCYLNSVLQCLTYTEPFAAYLQSGKHKSSC--RTAGFCALCALQNHVKTA 114
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
L S+GK+++P ++V NL IS F+ +QEDAHE + LL+ + CCL S ES S+
Sbjct: 115 LQSTGKIVTPSQIVKNLRCISRSFRNSRQEDAHELMVNLLESMHKCCLPSGVPSESPSAY 174
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
++V ++FGG L S+++C C CS+ ++P +DLSL+I SL AL++FT E ++
Sbjct: 175 EKSLVHKIFGGRLRSQVKCTQCSHCSNKFDPFLDLSLDIGKATSLVRALQNFTAEELLDG 234
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E ++ C++C+++V +K+ +DK P V HLKRF + + KIDK V+F LDLKP
Sbjct: 235 GEKQYQCQRCRKKVVAKKKFTIDKAPYVLTIHLKRF-SPFNPREKIDKKVDFQPMLDLKP 293
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
+ S + +D KY LY ++ H G + GHY+ ++R+S WH L+D++V +V E VL
Sbjct: 294 FISDSKGAD--FKYSLYGVLVHAGWNTQSGHYYCFVRTSSGMWHNLDDNQVRQVREADVL 351
Query: 406 SQDAYILFYAK 416
Q AY+LFY +
Sbjct: 352 RQKAYMLFYVR 362
>gi|222635089|gb|EEE65221.1| hypothetical protein OsJ_20367 [Oryza sativa Japonica Group]
Length = 940
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 131/311 (42%), Positives = 202/311 (64%), Gaps = 5/311 (1%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
+GAGL+NLGNTC++N++LQC T+T P L+S H C T GFC +CAL++H++ +
Sbjct: 98 IGAGLQNLGNTCYLNSVLQCLTYTEPFAAYLQSGKHKSSCR--TAGFCALCALQNHVKTA 155
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
L S+GK+++P ++V NL IS F+ +QEDAHE + LL+ + CCL S ES S+
Sbjct: 156 LQSTGKIVTPSQIVKNLRCISRSFRNSRQEDAHELMVNLLESMHKCCLPSGVPSESPSAY 215
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
++V ++FGG L S+++C C CS+ ++P +DLSL+I SL AL++FT E ++
Sbjct: 216 EKSLVHKIFGGRLRSQVKCTQCSHCSNKFDPFLDLSLDIGKATSLVRALQNFTAEELLDG 275
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E ++ C++C+++V +K+ +DK P V HLKRF + + KIDK V+F LDLKP
Sbjct: 276 GEKQYQCQRCRKKVVAKKKFTIDKAPYVLTIHLKRF-SPFNPREKIDKKVDFQPMLDLKP 334
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
+ S + +D KY LY ++ H G + GHY+ ++R+S WH L+D++V +V E VL
Sbjct: 335 FISDSKGAD--FKYSLYGVLVHAGWNTQSGHYYCFVRTSSGMWHNLDDNQVRQVREADVL 392
Query: 406 SQDAYILFYAK 416
Q AY+LFY +
Sbjct: 393 RQKAYMLFYVR 403
>gi|218197715|gb|EEC80142.1| hypothetical protein OsI_21934 [Oryza sativa Indica Group]
Length = 940
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 131/311 (42%), Positives = 202/311 (64%), Gaps = 5/311 (1%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
+GAGL+NLGNTC++N++LQC T+T P L+S H C T GFC +CAL++H++ +
Sbjct: 98 IGAGLQNLGNTCYLNSVLQCLTYTEPFAAYLQSGKHKSSCR--TAGFCALCALQNHVKTA 155
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
L S+GK+++P ++V NL IS F+ +QEDAHE + LL+ + CCL S ES S+
Sbjct: 156 LQSTGKIVTPSQIVKNLRCISRSFRNSRQEDAHELMVNLLESMHKCCLPSGVPSESPSAY 215
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
++V ++FGG L S+++C C CS+ ++P +DLSL+I SL AL++FT E ++
Sbjct: 216 EKSLVHKIFGGRLRSQVKCTQCSHCSNKFDPFLDLSLDIGKATSLVRALQNFTAEELLDG 275
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E ++ C++C+++V +K+ +DK P V HLKRF + + KIDK V+F LDLKP
Sbjct: 276 GEKQYQCQRCRKKVVAKKKFTIDKAPYVLTIHLKRF-SPFNPREKIDKKVDFQPMLDLKP 334
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
+ S + +D KY LY ++ H G + GHY+ ++R+S WH L+D++V +V E VL
Sbjct: 335 FISDSKGAD--FKYSLYGVLVHAGWNTQSGHYYCFVRTSSGMWHNLDDNQVRQVREADVL 392
Query: 406 SQDAYILFYAK 416
Q AY+LFY +
Sbjct: 393 RQKAYMLFYVR 403
>gi|55773913|dbj|BAD72518.1| putative ubiquitin-specific protease 23 [Oryza sativa Japonica
Group]
Length = 874
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 131/311 (42%), Positives = 202/311 (64%), Gaps = 5/311 (1%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
+GAGL+NLGNTC++N++LQC T+T P L+S H C T GFC +CAL++H++ +
Sbjct: 57 IGAGLQNLGNTCYLNSVLQCLTYTEPFAAYLQSGKHKSSC--RTAGFCALCALQNHVKTA 114
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
L S+GK+++P ++V NL IS F+ +QEDAHE + LL+ + CCL S ES S+
Sbjct: 115 LQSTGKIVTPSQIVKNLRCISRSFRNSRQEDAHELMVNLLESMHKCCLPSGVPSESPSAY 174
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
++V ++FGG L S+++C C CS+ ++P +DLSL+I SL AL++FT E ++
Sbjct: 175 EKSLVHKIFGGRLRSQVKCTQCSHCSNKFDPFLDLSLDIGKATSLVRALQNFTAEELLDG 234
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E ++ C++C+++V +K+ +DK P V HLKRF + + KIDK V+F LDLKP
Sbjct: 235 GEKQYQCQRCRKKVVAKKKFTIDKAPYVLTIHLKRF-SPFNPREKIDKKVDFQPMLDLKP 293
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
+ S + +D KY LY ++ H G + GHY+ ++R+S WH L+D++V +V E VL
Sbjct: 294 FISDSKGAD--FKYSLYGVLVHAGWNTQSGHYYCFVRTSSGMWHNLDDNQVRQVREADVL 351
Query: 406 SQDAYILFYAK 416
Q AY+LFY +
Sbjct: 352 RQKAYMLFYVR 362
>gi|357480083|ref|XP_003610327.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
gi|355511382|gb|AES92524.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
Length = 855
Score = 278 bits (711), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 135/311 (43%), Positives = 201/311 (64%), Gaps = 5/311 (1%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
+GAGL NLGNTCF+N++LQC T+T PL L+S H C A GFC +CA+++H+ +
Sbjct: 90 IGAGLWNLGNTCFLNSVLQCLTYTEPLAAYLQSGKHKSSCHIA--GFCALCAIQNHVSCA 147
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
L ++G+++SP+ +V NL IS F++ +QEDAHE++ LL+ + CCL S ES +
Sbjct: 148 LQATGRIVSPQDMVGNLRCISRNFRKARQEDAHEYMVNLLESMHKCCLPSGVPSESPGAF 207
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
++V ++FGG L S+++C C S+ ++P +DLSLEI SL AL +FT E ++
Sbjct: 208 EKSLVHKIFGGRLRSQVKCRQCSYSSNKFDPFLDLSLEILKADSLQKALANFTAAELLDG 267
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E ++ C++CK++V KQL + K P V A HLKRF +KI K V F L+LKP
Sbjct: 268 GEKQYHCQRCKQKVQAVKQLTIHKAPYVLAIHLKRFYAHDPN-IKIKKKVRFDSALNLKP 326
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
+ SG + DV KY LY ++ H G S GHY+ Y+R+S + W+ L+D+RV+ V E+ VL
Sbjct: 327 FVSGSSDGDV--KYSLYGVLVHSGFSTHSGHYYCYVRTSNNMWYTLDDTRVSHVGEQEVL 384
Query: 406 SQDAYILFYAK 416
+Q AY+LFY +
Sbjct: 385 NQQAYMLFYVR 395
>gi|218191741|gb|EEC74168.1| hypothetical protein OsI_09271 [Oryza sativa Indica Group]
Length = 1156
Score = 278 bits (711), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 138/333 (41%), Positives = 210/333 (63%), Gaps = 7/333 (2%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
+GAGL+N GNTC++N++LQC T+T P V L+S +H C T GFC +CAL+ H+ +
Sbjct: 83 IGAGLQNFGNTCYLNSVLQCLTYTEPFVAYLQSGEHMSSCR--TIGFCALCALQRHVNSA 140
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
L S+GK+L P +V NL IS F+ +QEDAHE + LL+ + CCL S S S+
Sbjct: 141 LQSTGKILRPVHIVRNLRCISRSFRISRQEDAHELMVRLLESMHKCCLPSGVPSGSPSAY 200
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
++V R+FGG L S+++C C CS+ ++P +DLSLEI + +L AL+ FT E ++
Sbjct: 201 EKSLVHRIFGGLLRSQVRCTTCSHCSNKFDPFLDLSLEIANAATLVKALQHFTAEELLDG 260
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E ++ CE C+++V +K+ M++K PSV HLKRF + + KIDK V+F L+LKP
Sbjct: 261 GEKQYNCEHCRQKVVAKKRFMIEKAPSVLTIHLKRF-SPFNPCHKIDKKVQFQPTLNLKP 319
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
Y S + +E KY LY ++ H G + GHY+ ++R+S WH L+D+ V +V E VL
Sbjct: 320 YVSNPEG--MEFKYSLYGVLVHAGWNTQSGHYYCFVRTSSGIWHNLDDNEVYQVREADVL 377
Query: 406 SQDAYILFYAKQGTEWVSSLLEAESIGMNADIS 438
Q AY+LFY + T SS++ +++ +N ++
Sbjct: 378 RQKAYMLFYVRDRTR--SSVMYSDNCTVNLSVN 408
>gi|29367503|gb|AAO72607.1| putative ubiquitin-specific protease [Oryza sativa Japonica Group]
Length = 842
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 132/310 (42%), Positives = 202/310 (65%), Gaps = 5/310 (1%)
Query: 107 GAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSL 166
GAGL+NLGNTC++N++LQC T+T P L+S H C T GFC +CAL++H++ +L
Sbjct: 1 GAGLQNLGNTCYLNSVLQCLTYTEPFAAYLQSGKHKSSC--RTAGFCALCALQNHVKTAL 58
Query: 167 ASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQG 226
S+GK+++P ++V NL IS F+ +QEDAHE + LL+ + CCL S ES S+
Sbjct: 59 QSTGKIVTPSQIVKNLRCISRSFRNSRQEDAHELMVNLLESMHKCCLPSGVPSESPSAYE 118
Query: 227 DNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIEDP 286
++V ++FGG L S+++C C CS+ ++P +DLSL+I SL AL++FT E ++
Sbjct: 119 KSLVHKIFGGRLRSQVKCTQCSHCSNKFDPFLDLSLDIGKATSLVRALQNFTAEELLDGG 178
Query: 287 ETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPY 346
E ++ C++C+++V +K+ +DK P V HLKRF + + KIDK V+F LDLKP+
Sbjct: 179 EKQYQCQRCRKKVVAKKKFTIDKAPYVLTIHLKRF-SPFNPREKIDKKVDFQPMLDLKPF 237
Query: 347 TSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLS 406
S + S+ LKY LY ++ H G + GHY+ ++R+S WH L+D++V +V E VL
Sbjct: 238 ISDSKVSN--LKYSLYGVLVHAGWNTQSGHYYCFVRTSSGMWHNLDDNQVRQVREADVLR 295
Query: 407 QDAYILFYAK 416
Q AY+LFY +
Sbjct: 296 QKAYMLFYVR 305
>gi|224143963|ref|XP_002325138.1| predicted protein [Populus trichocarpa]
gi|222866572|gb|EEF03703.1| predicted protein [Populus trichocarpa]
Length = 436
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 138/332 (41%), Positives = 205/332 (61%), Gaps = 5/332 (1%)
Query: 85 GSSLLSRPVEKHWPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRP 144
GS + ++ I +GAGLENLGNTCF+N+++QC T+T PL L+S H
Sbjct: 86 GSDFVENGLDPELCFGISFRKIGAGLENLGNTCFLNSVVQCLTYTEPLAAYLQSGKHQNS 145
Query: 145 CDGATEGFCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCL 204
C A GFC +CA++ H+ +L SSG+ L P+ LV NL IS F+ +QEDAHE++ L
Sbjct: 146 CHVA--GFCALCAIQKHVSRALQSSGRSLVPKDLVSNLRCISRNFRNARQEDAHEYMVNL 203
Query: 205 LDRLESCCLDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEI 264
L+ + CCL S ES ++ ++V ++FGG L S+++C C CS+ ++P +DLSLEI
Sbjct: 204 LESMHKCCLPSGVPSESPAAYEKSLVHKIFGGHLRSQVECQQCSYCSNKFDPFLDLSLEI 263
Query: 265 EDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTD 324
+L AL +FT E ++ E ++ C++CK++V +K+L + K P V HLKRF
Sbjct: 264 AKADTLPVALRNFTAAEVLDGGEKQYQCQRCKQKVRAKKRLTVHKAPHVLTIHLKRFHAH 323
Query: 325 GSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSS 384
K+DK V F LD+KP+ SG + + ELKY LY ++ H G + GHY ++R+S
Sbjct: 324 DP-GRKVDKKVIFDRSLDIKPFVSG--SYEGELKYSLYGVLVHYGHNTHSGHYVCFVRTS 380
Query: 385 PDTWHRLNDSRVTRVEEEFVLSQDAYILFYAK 416
+ WH LND++V +V E+ VL Q AY+LFY +
Sbjct: 381 SNMWHLLNDNQVRQVSEKTVLEQKAYMLFYVR 412
>gi|297796717|ref|XP_002866243.1| ubiquitin-specific protease 23 [Arabidopsis lyrata subsp. lyrata]
gi|297312078|gb|EFH42502.1| ubiquitin-specific protease 23 [Arabidopsis lyrata subsp. lyrata]
Length = 863
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 134/332 (40%), Positives = 201/332 (60%), Gaps = 6/332 (1%)
Query: 85 GSSLLSRPVEKHWPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRP 144
GS L + I +GAGL+NLGNTCF+N++LQC T+T PL L++ H +
Sbjct: 84 GSDLKEHGFDPELTFSITFRKIGAGLQNLGNTCFLNSVLQCLTYTEPLAATLQTAAHQKY 143
Query: 145 CDGATEGFCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCL 204
C A GFC +CA++ H+ + ++G++L+P+ LV NL IS F+ +QEDAHE++ L
Sbjct: 144 CHVA--GFCALCAIQKHVRTARQATGRILAPKDLVSNLRCISRNFRNCRQEDAHEYMINL 201
Query: 205 LDRLESCCLDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEI 264
L+ + C L S ES + ++V +FGG L S+++C C CS+ ++P +DLSL+I
Sbjct: 202 LECMHKCSLPSGVPSESSDAYRRSLVHNIFGGSLRSQVKCEQCSHCSNKFDPFLDLSLDI 261
Query: 265 EDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTD 324
SL AL FT +E ++D + CE+CK++V KQL + K P V HLKRF+
Sbjct: 262 SKADSLQRALSRFTAVELLDDGSKVYQCERCKQKVKARKQLTVSKAPYVLTIHLKRFEAH 321
Query: 325 GSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSS 384
S KID+ V+F +D+KP+ SG + LKY LY ++ H G S GHY ++R+S
Sbjct: 322 RSE--KIDRKVDFASAIDMKPFVSGPHEGN--LKYTLYGVLVHYGRSSHSGHYACFVRTS 377
Query: 385 PDTWHRLNDSRVTRVEEEFVLSQDAYILFYAK 416
W+ L+D+RV +V E+ V +Q AY+LFY +
Sbjct: 378 SGMWYSLDDNRVLQVSEKTVFNQKAYMLFYVR 409
>gi|11993486|gb|AAG42761.1|AF302671_1 ubiquitin-specific protease 23 [Arabidopsis thaliana]
Length = 859
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 136/346 (39%), Positives = 209/346 (60%), Gaps = 6/346 (1%)
Query: 71 DTRPISSSYGRYNWGSSLLSRPVEKHWPIQIKPTGVGAGLENLGNTCFINAILQCFTHTL 130
+ R +S+ + S LL E I +GAGL+NLGNTCF+N++LQC T+T
Sbjct: 70 NQRLLSAPSAKKPDSSDLLEHGFEPDLTFSITFRKIGAGLQNLGNTCFLNSVLQCLTYTE 129
Query: 131 PLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQ 190
PL L++ H + C A GFC +CA++ H+ + ++G++L+P+ LV NL IS F+
Sbjct: 130 PLAATLQTAAHQKYCHVA--GFCALCAIQKHVRTARQANGRILAPKDLVSNLRCISRNFR 187
Query: 191 RYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSC 250
+QEDAHE++ LL+ + C L S ES + ++V ++FGG L S+++C C C
Sbjct: 188 NCRQEDAHEYMINLLECMHKCSLPSGVPSESSDAYRRSLVHKIFGGSLRSQVKCEQCSHC 247
Query: 251 SDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKV 310
S+ ++P +DLSL+I SL AL FT +E +++ + CE+CK++V +KQL + K
Sbjct: 248 SNKFDPFLDLSLDISKADSLQRALSRFTAVELLDNGAKVYQCERCKQKVKAKKQLTVSKA 307
Query: 311 PSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGS 370
P V HLKRF+ S KID+ V+F +D+KP+ SG + LKY LY ++ H G
Sbjct: 308 PYVLTVHLKRFEAHRSE--KIDRKVDFTSAIDMKPFVSGPHEGN--LKYTLYGVLVHYGR 363
Query: 371 SPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAK 416
S GHY ++R+S W+ L+D+RV +V E+ V +Q AY+LFY +
Sbjct: 364 SSHSGHYACFVRTSSGMWYSLDDNRVVQVSEKTVFNQKAYMLFYVR 409
>gi|18424054|ref|NP_568873.1| ubiquitin carboxyl-terminal hydrolase 23 [Arabidopsis thaliana]
gi|166201350|sp|Q9FPS4.2|UBP23_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 23; AltName:
Full=Deubiquitinating enzyme 23; Short=AtUBP23; AltName:
Full=Ubiquitin thioesterase 23; AltName:
Full=Ubiquitin-specific-processing protease 23
gi|332009599|gb|AED96982.1| ubiquitin carboxyl-terminal hydrolase 23 [Arabidopsis thaliana]
Length = 859
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 136/346 (39%), Positives = 209/346 (60%), Gaps = 6/346 (1%)
Query: 71 DTRPISSSYGRYNWGSSLLSRPVEKHWPIQIKPTGVGAGLENLGNTCFINAILQCFTHTL 130
+ R +S+ + S LL E I +GAGL+NLGNTCF+N++LQC T+T
Sbjct: 70 NQRLLSAPSAKKPDSSDLLEHGFEPDLTFSITFRKIGAGLQNLGNTCFLNSVLQCLTYTE 129
Query: 131 PLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQ 190
PL L++ H + C A GFC +CA++ H+ + ++G++L+P+ LV NL IS F+
Sbjct: 130 PLAATLQTAAHQKYCHVA--GFCALCAIQKHVRTARQANGRILAPKDLVSNLRCISRNFR 187
Query: 191 RYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSC 250
+QEDAHE++ LL+ + C L S ES + ++V ++FGG L S+++C C C
Sbjct: 188 NCRQEDAHEYMINLLECMHKCSLPSGVPSESSDAYRRSLVHKIFGGSLRSQVKCEQCSHC 247
Query: 251 SDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKV 310
S+ ++P +DLSL+I SL AL FT +E +++ + CE+CK++V +KQL + K
Sbjct: 248 SNKFDPFLDLSLDISKADSLQRALSRFTAVELLDNGAKVYQCERCKQKVKAKKQLTVSKA 307
Query: 311 PSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGS 370
P V HLKRF+ S KID+ V+F +D+KP+ SG + LKY LY ++ H G
Sbjct: 308 PYVLTVHLKRFEAHRSE--KIDRKVDFTSAIDMKPFVSGPHEGN--LKYTLYGVLVHYGR 363
Query: 371 SPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAK 416
S GHY ++R+S W+ L+D+RV +V E+ V +Q AY+LFY +
Sbjct: 364 SSHSGHYACFVRTSSGMWYSLDDNRVVQVSEKTVFNQKAYMLFYVR 409
>gi|302765142|ref|XP_002965992.1| hypothetical protein SELMODRAFT_1903 [Selaginella moellendorffii]
gi|300166806|gb|EFJ33412.1| hypothetical protein SELMODRAFT_1903 [Selaginella moellendorffii]
Length = 309
Score = 268 bits (685), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 139/315 (44%), Positives = 200/315 (63%), Gaps = 11/315 (3%)
Query: 107 GAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSL 166
GAGL NLGNTCF+N++LQC T+T PL + L+S H C + GFC +CAL H++ +L
Sbjct: 1 GAGLTNLGNTCFLNSVLQCLTYTQPLAEFLKSGQHKLLCK--SSGFCAMCALEGHVKNAL 58
Query: 167 ASSGKVLSPRKLVDNLNY----ISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESL 222
S GKV++P ++ +NY IS FQ ++QEDAHEFL+ L++ L+ CL SKT S
Sbjct: 59 QSWGKVIAPNHMISRVNYSNAGISRAFQPWRQEDAHEFLRYLMEALQKDCLPSKTPMNS- 117
Query: 223 SSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEK 282
Q ++ ++FGG L S+++C NC S+T +P +DLSL+I SLG AL FT E
Sbjct: 118 PEQEKTLLYKIFGGRLRSQVKCSNCLERSETVDPFLDLSLDITRADSLGKALAWFTANE- 176
Query: 283 IEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELD 342
I D + K+ CEKCK++V K+ ++ P+V KRF + G + KIDK V F +LD
Sbjct: 177 ILDGDNKYHCEKCKKKVRAIKRFTIETAPNVLTVQFKRFSSTGLHGQKIDKKVHFGRKLD 236
Query: 343 LKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEE 402
+ P+ S ++ V Y LY ++ H G S GHY+ ++R+S D WH L+DSRV ++ E+
Sbjct: 237 ITPFMSNARDGAV---YDLYGVLVHAGWSTRSGHYYCFVRTSSDMWHVLDDSRVQQLSEQ 293
Query: 403 FVLSQDAYILFYAKQ 417
VL+Q AYILFY ++
Sbjct: 294 TVLNQKAYILFYIRK 308
>gi|302815104|ref|XP_002989234.1| hypothetical protein SELMODRAFT_1651 [Selaginella moellendorffii]
gi|300142977|gb|EFJ09672.1| hypothetical protein SELMODRAFT_1651 [Selaginella moellendorffii]
Length = 309
Score = 268 bits (684), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 139/315 (44%), Positives = 199/315 (63%), Gaps = 11/315 (3%)
Query: 107 GAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSL 166
GAGL NLGNTCF+N++LQC T+T PL + L+S H C + GFC +CAL H+ +L
Sbjct: 1 GAGLTNLGNTCFLNSVLQCLTYTQPLAEFLKSGQHKLLCK--SSGFCAMCALEGHVRNAL 58
Query: 167 ASSGKVLSPRKLVDNLNY----ISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESL 222
S GKV++P ++ +NY IS FQ ++QEDAHEFL+ L++ L+ CL SKT S
Sbjct: 59 QSWGKVIAPNHMISRVNYSNAGISRAFQPWRQEDAHEFLRYLMEALQKDCLPSKTPMNS- 117
Query: 223 SSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEK 282
Q ++ ++FGG L S+++C NC S+T +P +DLSL+I SLG AL FT E
Sbjct: 118 PEQEKTLLYKIFGGRLRSQVKCSNCLERSETVDPFLDLSLDITRADSLGKALAWFTANE- 176
Query: 283 IEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELD 342
I D + K+ CEKCK++V K+ ++ P+V KRF + G + KIDK V F +LD
Sbjct: 177 ILDGDNKYHCEKCKKKVRAIKRFTIETAPNVLTVQFKRFSSTGLHGQKIDKKVHFGRKLD 236
Query: 343 LKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEE 402
+ P+ S ++ V Y LY ++ H G S GHY+ ++R+S D WH L+DSRV ++ E+
Sbjct: 237 ITPFMSNARDGAV---YDLYGVLVHAGWSTRSGHYYCFVRTSSDMWHVLDDSRVQQLSEQ 293
Query: 403 FVLSQDAYILFYAKQ 417
VL+Q AYILFY ++
Sbjct: 294 TVLNQKAYILFYIRK 308
>gi|242040109|ref|XP_002467449.1| hypothetical protein SORBIDRAFT_01g028253 [Sorghum bicolor]
gi|241921303|gb|EER94447.1| hypothetical protein SORBIDRAFT_01g028253 [Sorghum bicolor]
Length = 306
Score = 262 bits (670), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 136/313 (43%), Positives = 192/313 (61%), Gaps = 9/313 (2%)
Query: 116 TCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLASSGKVLSP 175
TCF+N ILQC HT+PLV LR DHP PC A+ GFC C+L+ H+ S+ SG P
Sbjct: 1 TCFLNCILQCMVHTVPLVLKLRKTDHPDPCPRASIGFCCYCSLKQHVNESIRLSGSSFYP 60
Query: 176 RKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDNIVQRVFG 235
++ L ISS F+ Q+DA EFL+CLLD+L+ + ++ +ES +++ ++V+ +F
Sbjct: 61 EIFINRLKSISSDFKSGVQQDAQEFLRCLLDKLDEDSIAPRSSEESSTTKEGSVVKEIFR 120
Query: 236 GCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIEDPETKFTCEKC 295
GCL S+L+C C CSD EP +DLSL++ V +L AL+SFT E I+D F C+ C
Sbjct: 121 GCLKSQLRCPECDRCSDKSEPFLDLSLDLNMVETLMDALQSFTNTELIKD----FMCDGC 176
Query: 296 KEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV 355
K +VS+EK +++ P V HLKRF S KI V++PLELD+ + S +
Sbjct: 177 KSRVSMEKHFKIEQAPEVLVIHLKRFTNSES---KIWDKVKYPLELDINSFMSSSDDVSC 233
Query: 356 ELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYA 415
KY LY +VEH+G+ + GHY YIRSS W++ ND +V + + L AY+LFY
Sbjct: 234 SFKYDLYGVVEHLGAYGS-GHYVCYIRSSEADWYKFNDDKVYQCSVDSALENAAYLLFYV 292
Query: 416 KQGTE-WVSSLLE 427
KQG+ W S+LLE
Sbjct: 293 KQGSSPWFSTLLE 305
>gi|449453974|ref|XP_004144731.1| PREDICTED: uncharacterized protein LOC101219654 [Cucumis sativus]
Length = 933
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 138/334 (41%), Positives = 206/334 (61%), Gaps = 8/334 (2%)
Query: 85 GSSLLSRPVEKHWPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRP 144
GS LL ++ +I +GAGL+NLGNTCF+N++LQC T+T PL L+S H
Sbjct: 78 GSELLENGLDPELSFEITFRRIGAGLQNLGNTCFLNSVLQCLTYTEPLAAYLQSGKHQNS 137
Query: 145 CDGATEGFCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCL 204
C A GFC +CA++ H+ +L SSG++L+P+ LV NL IS F+ +QEDAHE++ L
Sbjct: 138 CHVA--GFCALCAIQKHVSRALQSSGRILAPKDLVSNLRCISRNFRNARQEDAHEYMVNL 195
Query: 205 LDRLESCCLDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEI 264
L+ + CCL ES S+ ++V ++FGG L S+++C C CS+ ++P +DLSL+I
Sbjct: 196 LESMHKCCLPLGLPSESPSAYEKSLVHKIFGGRLRSQVKCMQCSFCSNKFDPFLDLSLDI 255
Query: 265 EDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTD 324
S+ A ++FT E ++ E ++ C++CK++V KQ + K P V HLKRF+
Sbjct: 256 VKADSIYKAFKNFTTPELLDGGERQYQCQQCKQKVKALKQFTVHKAPYVLTIHLKRFQ-- 313
Query: 325 GSYVV--KIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIR 382
SY + KI K + F LDL P+ SG +D +LKY LY ++ H G S GHY+ Y+R
Sbjct: 314 -SYNLEEKIHKKIHFGPTLDLAPFVSGSY-ADGDLKYTLYGVLVHHGGSTRSGHYYCYVR 371
Query: 383 SSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAK 416
+S W+ L+D+RV+ V + V Q AY+LFY +
Sbjct: 372 TSSAMWYALDDNRVSHVGDRTVYEQQAYMLFYVR 405
>gi|449490903|ref|XP_004158744.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 23-like [Cucumis sativus]
Length = 898
Score = 259 bits (662), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 137/334 (41%), Positives = 204/334 (61%), Gaps = 9/334 (2%)
Query: 85 GSSLLSRPVEKHWPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRP 144
GS LL ++ +I +GAGL+NLGNTCF+N++LQC T+T PL L+S H
Sbjct: 78 GSELLENGLDPELSFEITFRRIGAGLQNLGNTCFLNSVLQCLTYTEPLAAYLQSGKHQNS 137
Query: 145 CDGATEGFCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCL 204
C A GFC +CA++ H+ +L SSG++L+P+ LV NL IS F+ +QEDAHE++ L
Sbjct: 138 CHVA--GFCALCAIQKHVSRALQSSGRILAPKDLVSNLRCISRNFRNARQEDAHEYMVNL 195
Query: 205 LDRLESCCLDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEI 264
L+ + CCL ES S+ ++V ++FGG L S+++C C CS+ ++P +DLSL+I
Sbjct: 196 LESMHKCCLPLGLPSESPSAYEKSLVHKIFGGRLRSQVKCMQCSXCSNKFDPFLDLSLDI 255
Query: 265 EDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTD 324
S+ A ++FT E ++ ++ C++CK++V KQ + K P V HLKRF+
Sbjct: 256 VKADSIYKAFKNFTTPELLDGGXRQYQCQQCKQKVKALKQFTVHKAPYVLTIHLKRFQ-- 313
Query: 325 GSYVV--KIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIR 382
SY + KI K + F LDL P+ SG + D LKY LY ++ H G S GHY+ Y+R
Sbjct: 314 -SYNLEEKIHKKIHFGPTLDLAPFVSGSYDGD--LKYTLYGVLVHHGGSTRSGHYYCYVR 370
Query: 383 SSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAK 416
+S W+ L+D+RV+ V + V Q AY+LFY +
Sbjct: 371 TSSAMWYALDDNRVSHVGDRTVYEQQAYMLFYVR 404
>gi|242066312|ref|XP_002454445.1| hypothetical protein SORBIDRAFT_04g031200 [Sorghum bicolor]
gi|241934276|gb|EES07421.1| hypothetical protein SORBIDRAFT_04g031200 [Sorghum bicolor]
Length = 697
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 147/310 (47%), Positives = 189/310 (60%), Gaps = 8/310 (2%)
Query: 145 CDGATEGFCVICALRDHIELSLASSGKVLS-PRK--LVDNLNYISSFFQRYQQEDAHEFL 201
CD + + R + + G VLS P K L++ +SS F+ QQEDAHEFL
Sbjct: 180 CDAEDMHIPLSVSYRRQPKSVIIRMGSVLSVPLKNMLMNQFEELSSDFRPGQQEDAHEFL 239
Query: 202 QCLLDRLESCCLDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLS 261
+CLLD L C LD K+K + S ++IV+ +FGG L S L CC CG S+T+EP +DLS
Sbjct: 240 RCLLDNLHKCTLDPKSKGKDSSFDEESIVKEIFGGQLRSHLSCCECGHSSETFEPFLDLS 299
Query: 262 LEIEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRF 321
LEI+ V L AL+SFTK+E I D E K TCE C QV KQL L + P V AFHLKRF
Sbjct: 300 LEIDQVDHLVDALQSFTKVEHIGDSENKLTCESCNAQVCKNKQLTLHRAPDVIAFHLKRF 359
Query: 322 KTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYI 381
T + V KIDKHV +PLE+DLKP+ S ++ ELKY LY +VEH G P GHY I
Sbjct: 360 TTLDNSVEKIDKHVVYPLEVDLKPFYS-NPDAAGELKYDLYGVVEHSG-LPNYGHYVCAI 417
Query: 382 RSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGT-EWVSSLLEAESIGMNADISNS 440
RSSP TW + +V + + L+Q+AYILFY +QG W SSLLE + + +
Sbjct: 418 RSSPSTWQDI--LQVDSITDSSALNQEAYILFYVRQGKFPWFSSLLEGKDALQVENTRGT 475
Query: 441 SPKSVLDNVE 450
SP SVL+N++
Sbjct: 476 SPVSVLENID 485
>gi|351704980|gb|EHB07899.1| Ubiquitin carboxyl-terminal hydrolase 42, partial [Heterocephalus
glaber]
Length = 1272
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 133/326 (40%), Positives = 197/326 (60%), Gaps = 10/326 (3%)
Query: 92 PVEKHWPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEG 151
P EK + K VGAGL+NLGNTCF NA LQC T+T PL + S +H R C +G
Sbjct: 78 PSEKIYLKWQKTQRVGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSRTCH--VKG 135
Query: 152 FCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESC 211
FC++C ++ HI +L+ G VL P +++ + +++ F QEDAHEFLQ ++D ++
Sbjct: 136 FCMMCTMQAHITQALSHPGDVLKPMSIINEMEDVATHFHFGSQEDAHEFLQYIVDGMQKA 195
Query: 212 CLDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLG 271
CL+ K + +Q +V ++FGG L S+++C NC SDT+EP +D++LEI+ S+
Sbjct: 196 CLNGSNKLDR-HTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFEPFLDITLEIKASPSVN 254
Query: 272 SALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRF-KTDGSYVVK 330
ALE F K E++ D E + C KCK+ V K+ + + +V LKRF T G K
Sbjct: 255 KALEQFVKPEQL-DGENAYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANTTGG---K 310
Query: 331 IDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHR 390
I K V++P LD++PY S Q + + Y LYA++ H G + GHYF YI++S W++
Sbjct: 311 IAKDVKYPEYLDIRPYMS--QQNGEPIIYVLYAVLVHAGFNCHSGHYFCYIKASNGLWYQ 368
Query: 391 LNDSRVTRVEEEFVLSQDAYILFYAK 416
+NDS V+ + VLSQ AY+LFY +
Sbjct: 369 MNDSIVSTSDIRSVLSQQAYVLFYIR 394
>gi|327285944|ref|XP_003227691.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42-like [Anolis
carolinensis]
Length = 1283
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 133/347 (38%), Positives = 206/347 (59%), Gaps = 22/347 (6%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL+NLGNTCF+N+ LQC T+T PL + S +H + C +GFC++C ++ HI +
Sbjct: 109 VGAGLQNLGNTCFLNSALQCLTYTPPLANYMLSHEHSKTCH--EQGFCMMCTMQSHITQA 166
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
L++SG V+ P ++++L I+ F+ QEDAHEFL+ +D ++ CL+ K + +Q
Sbjct: 167 LSNSGNVIKPMPVINDLRRIAKHFRFGNQEDAHEFLRYTVDAMQKACLNGSNKLD-RHTQ 225
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+ ++FGG L S+++C NC SDT++P +D++LEI+ S+ ALE F K E++ D
Sbjct: 226 ATTFIHQIFGGYLRSRVKCMNCKGVSDTFDPYLDITLEIKSAQSINKALEQFVKPEQL-D 284
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E + C KCK+ V K+ + + +V LKRF KI K V++P LD++P
Sbjct: 285 GENAYKCSKCKKMVPASKRFTVHRASNVLTLSLKRFANFSG--GKITKEVKYPEYLDIRP 342
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
Y S Q + + Y LYA++ H G S GHY+ YI++S W+++NDS V+ + VL
Sbjct: 343 YMS--QPNGEPIIYALYAVLVHTGFSCHAGHYYCYIKASNGQWYQMNDSTVSNSDIRTVL 400
Query: 406 SQDAYILFY-----AKQGTEWVSSLLEAESIGMNADISNSSPKSVLD 447
+Q AY+LFY K G E + S A + G SSP+ V++
Sbjct: 401 NQQAYVLFYIRSHDMKNGGEHIHS---AHTPGQ------SSPRPVIN 438
>gi|348568324|ref|XP_003469948.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 42-like [Cavia porcellus]
Length = 1224
Score = 249 bits (637), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 131/323 (40%), Positives = 195/323 (60%), Gaps = 13/323 (4%)
Query: 105 GVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIEL 164
GVGAGL+NLGNTCF NA LQC T+T PL + S +H C EGFC++C ++DHI
Sbjct: 104 GVGAGLQNLGNTCFANAALQCLTYTAPLANYMLSHEHSETCH--AEGFCMMCIMQDHITQ 161
Query: 165 SLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSS 224
+L + G V+ P +++ + I+S FQ +QEDAHEFLQ +D ++ CL S + + +
Sbjct: 162 ALNNPGDVIKPMFVINEMQRIASHFQIGEQEDAHEFLQHTVDAMQEACL-SGSNELDRHT 220
Query: 225 QGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIE 284
Q ++ +VFGG L S++QC NC SDT++P +D++LEI+ ++ AL F K E++
Sbjct: 221 QATTLICQVFGGYLRSRVQCLNCKGVSDTFDPYLDITLEIKGARTINEALAQFVKPEQL- 279
Query: 285 DPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLK 344
D E + C KCK V K + + +V LKRF S KI K V++P LD++
Sbjct: 280 DGENCYQCSKCKIMVPASKNFTIHQSSNVLILSLKRFSN--STGGKIAKDVKYPEYLDIR 337
Query: 345 PYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFV 404
PY S Q + + Y LYA++ H G + GHY ++++S W+++NDS+V+ + E V
Sbjct: 338 PYMS--QPNGEPIVYTLYAVLIHAGYNCRVGHYLCHVKASNGLWYQMNDSKVSPSDTESV 395
Query: 405 LSQDAYILFY-----AKQGTEWV 422
LSQ AY+LFY K G+E+
Sbjct: 396 LSQQAYVLFYIRTNDVKSGSEFA 418
>gi|432100061|gb|ELK28954.1| Ubiquitin carboxyl-terminal hydrolase 42 [Myotis davidii]
Length = 1175
Score = 249 bits (637), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 143/361 (39%), Positives = 210/361 (58%), Gaps = 27/361 (7%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL+NLGNTCF NA LQC T+T PL + S +H + C EGFC++C ++ HI +
Sbjct: 109 VGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCH--AEGFCMMCTMQAHITQA 166
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
L++ G V+ P +++ + I+ F+ QEDAHEFLQ +D ++ CL+ K + +Q
Sbjct: 167 LSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDR-HTQ 225
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C NC SDT++P +D++LEI+ S+ ALE F K E++ D
Sbjct: 226 ATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQL-D 284
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK--TDGSYVVKIDKHVEFPLELDL 343
E + C KCK+ V K+ + + +V LKRF T G KI K V++P LD+
Sbjct: 285 GENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG----KIAKDVKYPEYLDI 340
Query: 344 KPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
+PY S Q + + Y LYA++ H G + GHYF YI++S W+++NDS V+ +
Sbjct: 341 RPYMS--QPNGEPIIYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRS 398
Query: 404 VLSQDAYILFY-----AKQGTEWVSSLLEAESIGMNADISNSSPKSVLDN-VENDYTSRS 457
VLSQ AY+LFY K G E S A S G SSP+ V+ V N+ + S
Sbjct: 399 VLSQQAYVLFYIRSHDVKNGGELTHS---AHSPGQ------SSPRPVISQRVVNNKQATS 449
Query: 458 G 458
G
Sbjct: 450 G 450
>gi|431918189|gb|ELK17417.1| Ubiquitin carboxyl-terminal hydrolase 42 [Pteropus alecto]
Length = 1361
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 139/348 (39%), Positives = 204/348 (58%), Gaps = 26/348 (7%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL+NLGNTCF NA LQC T+T PL + S +H + C EGFC++C ++ HI +
Sbjct: 109 VGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCH--AEGFCMMCTMQAHITQA 166
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
L++ G V+ P +++ + I+ F+ QEDAHEFLQ +D ++ CL+ K + +Q
Sbjct: 167 LSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDR-HTQ 225
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C NC SDT++P +D++LEI+ S+ ALE F K E++ D
Sbjct: 226 ATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQL-D 284
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK--TDGSYVVKIDKHVEFPLELDL 343
E + C KCK+ V K+ + + +V LKRF T G KI K V++P LD+
Sbjct: 285 GENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG----KIAKDVKYPEYLDI 340
Query: 344 KPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
+PY S Q + + Y LYA++ H G + GHYF YI++S W+++NDS V+ +
Sbjct: 341 RPYMS--QPNGEPIIYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRS 398
Query: 404 VLSQDAYILFY-----AKQGTEWVSSLLEAESIGMNADISNSSPKSVL 446
VLSQ AY+LFY K G E S A S G SSP+ V+
Sbjct: 399 VLSQQAYVLFYIRSHDVKNGGELTHS---AHSPGQ------SSPRPVI 437
>gi|380791957|gb|AFE67854.1| ubiquitin carboxyl-terminal hydrolase 42, partial [Macaca mulatta]
Length = 743
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 128/313 (40%), Positives = 192/313 (61%), Gaps = 12/313 (3%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL+NLGNTCF NA LQC T+T PL + S +H + C EGFC++C ++ HI +
Sbjct: 109 VGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHA--EGFCMMCTMQAHITQA 166
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
L++ G V+ P +++ + I+ F+ QEDAHEFLQ +D ++ CL+ K + +Q
Sbjct: 167 LSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDR-HTQ 225
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C NC SDT++P +D++LEI+ S+ ALE F K E++ D
Sbjct: 226 ATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQL-D 284
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK--TDGSYVVKIDKHVEFPLELDL 343
E + C KCK+ V K+ + + +V LKRF T G KI K V++P LD+
Sbjct: 285 GENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG----KIAKDVKYPEYLDI 340
Query: 344 KPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
+PY S Q + + Y LYA++ H G + GHYF YI++S W+++NDS V+ +
Sbjct: 341 RPYMS--QPNGEPIVYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRS 398
Query: 404 VLSQDAYILFYAK 416
VLSQ AY+LFY +
Sbjct: 399 VLSQQAYVLFYIR 411
>gi|440899908|gb|ELR51150.1| Ubiquitin carboxyl-terminal hydrolase 42, partial [Bos grunniens
mutus]
Length = 1304
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 143/361 (39%), Positives = 209/361 (57%), Gaps = 27/361 (7%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL+NLGNTCF NA LQC T+T PL + S +H + C EGFC++C ++ HI +
Sbjct: 109 VGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCH--AEGFCMMCTMQAHITQA 166
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
L++ G V+ P +++ + I+ F+ QEDAHEFLQ +D ++ CL+ K + +Q
Sbjct: 167 LSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDR-HTQ 225
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C NC SDT++P +D++LEI+ S+ ALE F K E++ D
Sbjct: 226 ATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQL-D 284
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK--TDGSYVVKIDKHVEFPLELDL 343
E + C KCK+ V K+ + + +V LKRF T G KI K V++P LD+
Sbjct: 285 GENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG----KIAKDVKYPEYLDI 340
Query: 344 KPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
+PY S Q + + Y LYA++ H G + GHYF YI++S W+++NDS V+ +
Sbjct: 341 RPYMS--QPNGEPIIYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRS 398
Query: 404 VLSQDAYILFY-----AKQGTEWVSSLLEAESIGMNADISNSSPKSVLDN-VENDYTSRS 457
VLSQ AY+LFY K G E S A S G SSP+ V+ V N + S
Sbjct: 399 VLSQQAYVLFYIRSHDVKNGGELTHS---AHSPGQ------SSPRPVISQRVVNSKQAAS 449
Query: 458 G 458
G
Sbjct: 450 G 450
>gi|194218707|ref|XP_001493909.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Equus
caballus]
Length = 1393
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 128/313 (40%), Positives = 192/313 (61%), Gaps = 12/313 (3%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL+NLGNTCF NA LQC T+T PL + S +H + C EGFC++C ++ HI +
Sbjct: 109 VGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCH--AEGFCMMCTMQAHITQA 166
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
L++ G V+ P +++ + I+ F+ QEDAHEFLQ +D ++ CL+ K + +Q
Sbjct: 167 LSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDR-HTQ 225
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C NC SDT++P +D++LEI+ S+ ALE F K E++ D
Sbjct: 226 ATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQL-D 284
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK--TDGSYVVKIDKHVEFPLELDL 343
E + C KCK+ V K+ + + +V LKRF T G KI K V++P LD+
Sbjct: 285 GENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG----KIAKDVKYPEYLDI 340
Query: 344 KPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
+PY S Q + + Y LYA++ H G + GHYF YI++S W+++NDS V+ +
Sbjct: 341 RPYMS--QPNGEPIIYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRS 398
Query: 404 VLSQDAYILFYAK 416
VLSQ AY+LFY +
Sbjct: 399 VLSQQAYVLFYIR 411
>gi|71052117|gb|AAH60846.2| USP42 protein, partial [Homo sapiens]
Length = 1202
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 128/313 (40%), Positives = 192/313 (61%), Gaps = 12/313 (3%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL+NLGNTCF NA LQC T+T PL + S +H + C EGFC++C ++ HI +
Sbjct: 109 VGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCH--AEGFCMMCTMQAHITQA 166
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
L++ G V+ P +++ + I+ F+ QEDAHEFLQ +D ++ CL+ K + +Q
Sbjct: 167 LSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDR-HTQ 225
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C NC SDT++P +D++LEI+ S+ ALE F K E++ D
Sbjct: 226 ATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQL-D 284
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK--TDGSYVVKIDKHVEFPLELDL 343
E + C KCK+ V K+ + + +V LKRF T G KI K V++P LD+
Sbjct: 285 GENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG----KIAKDVKYPEYLDI 340
Query: 344 KPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
+PY S Q + + Y LYA++ H G + GHYF YI++S W+++NDS V+ +
Sbjct: 341 RPYMS--QPNGEPIVYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRS 398
Query: 404 VLSQDAYILFYAK 416
VLSQ AY+LFY +
Sbjct: 399 VLSQQAYVLFYIR 411
>gi|10434352|dbj|BAB14232.1| unnamed protein product [Homo sapiens]
Length = 1198
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 128/313 (40%), Positives = 192/313 (61%), Gaps = 12/313 (3%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL+NLGNTCF NA LQC T+T PL + S +H + C EGFC++C ++ HI +
Sbjct: 109 VGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCH--AEGFCMMCTMQAHITQA 166
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
L++ G V+ P +++ + I+ F+ QEDAHEFLQ +D ++ CL+ K + +Q
Sbjct: 167 LSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDR-HTQ 225
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C NC SDT++P +D++LEI+ S+ ALE F K E++ D
Sbjct: 226 ATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQL-D 284
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK--TDGSYVVKIDKHVEFPLELDL 343
E + C KCK+ V K+ + + +V LKRF T G KI K V++P LD+
Sbjct: 285 GENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG----KIAKDVKYPEYLDI 340
Query: 344 KPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
+PY S Q + + Y LYA++ H G + GHYF YI++S W+++NDS V+ +
Sbjct: 341 RPYMS--QPNGEPIVYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRS 398
Query: 404 VLSQDAYILFYAK 416
VLSQ AY+LFY +
Sbjct: 399 VLSQQAYVLFYIR 411
>gi|348568306|ref|XP_003469939.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42-like [Cavia
porcellus]
Length = 1328
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 127/311 (40%), Positives = 191/311 (61%), Gaps = 8/311 (2%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL+NLGNTCF NA LQC T+T PL + S +H + C EGFC++C ++ HI +
Sbjct: 107 VGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHA--EGFCMMCTMQAHITQA 164
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
L++ G V+ P +++ + I+ F+ QEDAHEFLQ +D ++ CL+ K + +Q
Sbjct: 165 LSNPGDVIKPMFVINEMQRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDR-HTQ 223
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C NC SDT++P +D++LEI+ S+ ALE F K E++ D
Sbjct: 224 ATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAPSVNKALEQFVKPEQL-D 282
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E + C KCK+ V K+ + + +V LKRF S KI K V++P LD++P
Sbjct: 283 GENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFAN--STGGKIAKDVKYPEYLDIRP 340
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
Y S Q + + Y LYA++ H G + GHYF YI++S W+++NDS V+ + VL
Sbjct: 341 YMS--QPNGEPIIYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVL 398
Query: 406 SQDAYILFYAK 416
SQ AY+LFY +
Sbjct: 399 SQQAYVLFYIR 409
>gi|402862840|ref|XP_003895748.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Papio anubis]
Length = 1316
Score = 249 bits (635), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 128/313 (40%), Positives = 192/313 (61%), Gaps = 12/313 (3%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL+NLGNTCF NA LQC T+T PL + S +H + C EGFC++C ++ HI +
Sbjct: 109 VGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCH--AEGFCMMCTMQAHITQA 166
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
L++ G V+ P +++ + I+ F+ QEDAHEFLQ +D ++ CL+ K + +Q
Sbjct: 167 LSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDR-HTQ 225
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C NC SDT++P +D++LEI+ S+ ALE F K E++ D
Sbjct: 226 ATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQL-D 284
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK--TDGSYVVKIDKHVEFPLELDL 343
E + C KCK+ V K+ + + +V LKRF T G KI K V++P LD+
Sbjct: 285 GENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG----KIAKDVKYPEYLDI 340
Query: 344 KPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
+PY S Q + + Y LYA++ H G + GHYF YI++S W+++NDS V+ +
Sbjct: 341 RPYMS--QPNGEPIVYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRS 398
Query: 404 VLSQDAYILFYAK 416
VLSQ AY+LFY +
Sbjct: 399 VLSQQAYVLFYIR 411
>gi|322967638|sp|E1B9W9.1|UBP42_BOVIN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 42; AltName:
Full=Deubiquitinating enzyme 42; AltName: Full=Ubiquitin
thioesterase 42; AltName:
Full=Ubiquitin-specific-processing protease 42
Length = 1333
Score = 249 bits (635), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 143/361 (39%), Positives = 209/361 (57%), Gaps = 27/361 (7%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL+NLGNTCF NA LQC T+T PL + S +H + C EGFC++C ++ HI +
Sbjct: 109 VGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCH--AEGFCMMCTMQAHITQA 166
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
L++ G V+ P +++ + I+ F+ QEDAHEFLQ +D ++ CL+ K + +Q
Sbjct: 167 LSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDR-HTQ 225
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C NC SDT++P +D++LEI+ S+ ALE F K E++ D
Sbjct: 226 ATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQL-D 284
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK--TDGSYVVKIDKHVEFPLELDL 343
E + C KCK+ V K+ + + +V LKRF T G KI K V++P LD+
Sbjct: 285 GENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG----KIAKDVKYPEYLDI 340
Query: 344 KPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
+PY S Q + + Y LYA++ H G + GHYF YI++S W+++NDS V+ +
Sbjct: 341 RPYMS--QPNGEPIIYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRS 398
Query: 404 VLSQDAYILFY-----AKQGTEWVSSLLEAESIGMNADISNSSPKSVLDN-VENDYTSRS 457
VLSQ AY+LFY K G E S A S G SSP+ V+ V N + S
Sbjct: 399 VLSQQAYVLFYIRSHDVKNGGELTHS---AHSPGQ------SSPRPVISQRVVNSKQAAS 449
Query: 458 G 458
G
Sbjct: 450 G 450
>gi|331284138|ref|NP_001193568.1| ubiquitin carboxyl-terminal hydrolase 42 [Bos taurus]
gi|296473096|tpg|DAA15211.1| TPA: ubiquitin specific protease 42-like [Bos taurus]
Length = 1325
Score = 249 bits (635), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 143/361 (39%), Positives = 209/361 (57%), Gaps = 27/361 (7%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL+NLGNTCF NA LQC T+T PL + S +H + C EGFC++C ++ HI +
Sbjct: 109 VGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCH--AEGFCMMCTMQAHITQA 166
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
L++ G V+ P +++ + I+ F+ QEDAHEFLQ +D ++ CL+ K + +Q
Sbjct: 167 LSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDR-HTQ 225
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C NC SDT++P +D++LEI+ S+ ALE F K E++ D
Sbjct: 226 ATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQL-D 284
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK--TDGSYVVKIDKHVEFPLELDL 343
E + C KCK+ V K+ + + +V LKRF T G KI K V++P LD+
Sbjct: 285 GENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG----KIAKDVKYPEYLDI 340
Query: 344 KPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
+PY S Q + + Y LYA++ H G + GHYF YI++S W+++NDS V+ +
Sbjct: 341 RPYMS--QPNGEPIIYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRS 398
Query: 404 VLSQDAYILFY-----AKQGTEWVSSLLEAESIGMNADISNSSPKSVLDN-VENDYTSRS 457
VLSQ AY+LFY K G E S A S G SSP+ V+ V N + S
Sbjct: 399 VLSQQAYVLFYIRSHDVKNGGELTHS---AHSPGQ------SSPRPVISQRVVNSKQAAS 449
Query: 458 G 458
G
Sbjct: 450 G 450
>gi|119575449|gb|EAW55047.1| ubiquitin specific peptidase 42, isoform CRA_a [Homo sapiens]
Length = 1234
Score = 249 bits (635), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 128/313 (40%), Positives = 192/313 (61%), Gaps = 12/313 (3%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL+NLGNTCF NA LQC T+T PL + S +H + C EGFC++C ++ HI +
Sbjct: 109 VGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCH--AEGFCMMCTMQAHITQA 166
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
L++ G V+ P +++ + I+ F+ QEDAHEFLQ +D ++ CL+ K + +Q
Sbjct: 167 LSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDR-HTQ 225
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C NC SDT++P +D++LEI+ S+ ALE F K E++ D
Sbjct: 226 ATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQL-D 284
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK--TDGSYVVKIDKHVEFPLELDL 343
E + C KCK+ V K+ + + +V LKRF T G KI K V++P LD+
Sbjct: 285 GENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG----KIAKDVKYPEYLDI 340
Query: 344 KPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
+PY S Q + + Y LYA++ H G + GHYF YI++S W+++NDS V+ +
Sbjct: 341 RPYMS--QPNGEPIVYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRS 398
Query: 404 VLSQDAYILFYAK 416
VLSQ AY+LFY +
Sbjct: 399 VLSQQAYVLFYIR 411
>gi|332265913|ref|XP_003281959.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Nomascus
leucogenys]
Length = 1315
Score = 249 bits (635), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 128/313 (40%), Positives = 192/313 (61%), Gaps = 12/313 (3%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL+NLGNTCF NA LQC T+T PL + S +H + C EGFC++C ++ HI +
Sbjct: 109 VGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCH--AEGFCMMCTMQAHITQA 166
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
L++ G V+ P +++ + I+ F+ QEDAHEFLQ +D ++ CL+ K + +Q
Sbjct: 167 LSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDR-HTQ 225
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C NC SDT++P +D++LEI+ S+ ALE F K E++ D
Sbjct: 226 ATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQL-D 284
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK--TDGSYVVKIDKHVEFPLELDL 343
E + C KCK+ V K+ + + +V LKRF T G KI K V++P LD+
Sbjct: 285 GENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG----KIAKDVKYPEYLDI 340
Query: 344 KPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
+PY S Q + + Y LYA++ H G + GHYF YI++S W+++NDS V+ +
Sbjct: 341 RPYMS--QPNGEPIVYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRS 398
Query: 404 VLSQDAYILFYAK 416
VLSQ AY+LFY +
Sbjct: 399 VLSQQAYVLFYIR 411
>gi|79750944|ref|NP_115548.1| ubiquitin carboxyl-terminal hydrolase 42 [Homo sapiens]
gi|124376914|gb|AAI32863.1| Ubiquitin specific peptidase 42 [Homo sapiens]
Length = 1316
Score = 248 bits (634), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 128/313 (40%), Positives = 192/313 (61%), Gaps = 12/313 (3%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL+NLGNTCF NA LQC T+T PL + S +H + C EGFC++C ++ HI +
Sbjct: 109 VGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCH--AEGFCMMCTMQAHITQA 166
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
L++ G V+ P +++ + I+ F+ QEDAHEFLQ +D ++ CL+ K + +Q
Sbjct: 167 LSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDR-HTQ 225
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C NC SDT++P +D++LEI+ S+ ALE F K E++ D
Sbjct: 226 ATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQL-D 284
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK--TDGSYVVKIDKHVEFPLELDL 343
E + C KCK+ V K+ + + +V LKRF T G KI K V++P LD+
Sbjct: 285 GENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG----KIAKDVKYPEYLDI 340
Query: 344 KPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
+PY S Q + + Y LYA++ H G + GHYF YI++S W+++NDS V+ +
Sbjct: 341 RPYMS--QPNGEPIVYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRS 398
Query: 404 VLSQDAYILFYAK 416
VLSQ AY+LFY +
Sbjct: 399 VLSQQAYVLFYIR 411
>gi|51094456|gb|EAL23715.1| ubiquitin specific protease 42 [Homo sapiens]
Length = 1350
Score = 248 bits (634), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 128/313 (40%), Positives = 192/313 (61%), Gaps = 12/313 (3%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL+NLGNTCF NA LQC T+T PL + S +H + C EGFC++C ++ HI +
Sbjct: 109 VGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCH--AEGFCMMCTMQAHITQA 166
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
L++ G V+ P +++ + I+ F+ QEDAHEFLQ +D ++ CL+ K + +Q
Sbjct: 167 LSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDR-HTQ 225
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C NC SDT++P +D++LEI+ S+ ALE F K E++ D
Sbjct: 226 ATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQL-D 284
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK--TDGSYVVKIDKHVEFPLELDL 343
E + C KCK+ V K+ + + +V LKRF T G KI K V++P LD+
Sbjct: 285 GENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG----KIAKDVKYPEYLDI 340
Query: 344 KPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
+PY S Q + + Y LYA++ H G + GHYF YI++S W+++NDS V+ +
Sbjct: 341 RPYMS--QPNGEPIVYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRS 398
Query: 404 VLSQDAYILFYAK 416
VLSQ AY+LFY +
Sbjct: 399 VLSQQAYVLFYIR 411
>gi|322510098|sp|Q9H9J4.3|UBP42_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 42; AltName:
Full=Deubiquitinating enzyme 42; AltName: Full=Ubiquitin
thioesterase 42; AltName:
Full=Ubiquitin-specific-processing protease 42
Length = 1324
Score = 248 bits (634), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 128/313 (40%), Positives = 192/313 (61%), Gaps = 12/313 (3%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL+NLGNTCF NA LQC T+T PL + S +H + C EGFC++C ++ HI +
Sbjct: 109 VGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCH--AEGFCMMCTMQAHITQA 166
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
L++ G V+ P +++ + I+ F+ QEDAHEFLQ +D ++ CL+ K + +Q
Sbjct: 167 LSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDR-HTQ 225
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C NC SDT++P +D++LEI+ S+ ALE F K E++ D
Sbjct: 226 ATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQL-D 284
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK--TDGSYVVKIDKHVEFPLELDL 343
E + C KCK+ V K+ + + +V LKRF T G KI K V++P LD+
Sbjct: 285 GENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG----KIAKDVKYPEYLDI 340
Query: 344 KPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
+PY S Q + + Y LYA++ H G + GHYF YI++S W+++NDS V+ +
Sbjct: 341 RPYMS--QPNGEPIVYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRS 398
Query: 404 VLSQDAYILFYAK 416
VLSQ AY+LFY +
Sbjct: 399 VLSQQAYVLFYIR 411
>gi|78057011|emb|CAE53097.1| ubiquitin-specific protease 42 [Homo sapiens]
Length = 1325
Score = 248 bits (634), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 128/313 (40%), Positives = 192/313 (61%), Gaps = 12/313 (3%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL+NLGNTCF NA LQC T+T PL + S +H + C EGFC++C ++ HI +
Sbjct: 109 VGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCH--AEGFCMMCTMQAHITQA 166
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
L++ G V+ P +++ + I+ F+ QEDAHEFLQ +D ++ CL+ K + +Q
Sbjct: 167 LSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDR-HTQ 225
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C NC SDT++P +D++LEI+ S+ ALE F K E++ D
Sbjct: 226 ATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQL-D 284
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK--TDGSYVVKIDKHVEFPLELDL 343
E + C KCK+ V K+ + + +V LKRF T G KI K V++P LD+
Sbjct: 285 GENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG----KIAKDVKYPEYLDI 340
Query: 344 KPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
+PY S Q + + Y LYA++ H G + GHYF YI++S W+++NDS V+ +
Sbjct: 341 RPYMS--QPNGEPIVYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRS 398
Query: 404 VLSQDAYILFYAK 416
VLSQ AY+LFY +
Sbjct: 399 VLSQQAYVLFYIR 411
>gi|114612043|ref|XP_527662.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Pan
troglodytes]
gi|410215148|gb|JAA04793.1| ubiquitin specific peptidase 42 [Pan troglodytes]
gi|410304720|gb|JAA30960.1| ubiquitin specific peptidase 42 [Pan troglodytes]
Length = 1316
Score = 248 bits (634), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 128/313 (40%), Positives = 192/313 (61%), Gaps = 12/313 (3%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL+NLGNTCF NA LQC T+T PL + S +H + C EGFC++C ++ HI +
Sbjct: 109 VGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCH--AEGFCMMCTMQAHITQA 166
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
L++ G V+ P +++ + I+ F+ QEDAHEFLQ +D ++ CL+ K + +Q
Sbjct: 167 LSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDR-HTQ 225
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C NC SDT++P +D++LEI+ S+ ALE F K E++ D
Sbjct: 226 ATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQL-D 284
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK--TDGSYVVKIDKHVEFPLELDL 343
E + C KCK+ V K+ + + +V LKRF T G KI K V++P LD+
Sbjct: 285 GENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG----KIAKDVKYPEYLDI 340
Query: 344 KPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
+PY S Q + + Y LYA++ H G + GHYF YI++S W+++NDS V+ +
Sbjct: 341 RPYMS--QPNGEPIVYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRS 398
Query: 404 VLSQDAYILFYAK 416
VLSQ AY+LFY +
Sbjct: 399 VLSQQAYVLFYIR 411
>gi|109065910|ref|XP_001090104.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Macaca
mulatta]
Length = 1317
Score = 248 bits (634), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 128/313 (40%), Positives = 192/313 (61%), Gaps = 12/313 (3%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL+NLGNTCF NA LQC T+T PL + S +H + C EGFC++C ++ HI +
Sbjct: 109 VGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCH--AEGFCMMCTMQAHITQA 166
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
L++ G V+ P +++ + I+ F+ QEDAHEFLQ +D ++ CL+ K + +Q
Sbjct: 167 LSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDR-HTQ 225
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C NC SDT++P +D++LEI+ S+ ALE F K E++ D
Sbjct: 226 ATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQL-D 284
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK--TDGSYVVKIDKHVEFPLELDL 343
E + C KCK+ V K+ + + +V LKRF T G KI K V++P LD+
Sbjct: 285 GENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG----KIAKDVKYPEYLDI 340
Query: 344 KPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
+PY S Q + + Y LYA++ H G + GHYF YI++S W+++NDS V+ +
Sbjct: 341 RPYMS--QPNGEPIVYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRS 398
Query: 404 VLSQDAYILFYAK 416
VLSQ AY+LFY +
Sbjct: 399 VLSQQAYVLFYIR 411
>gi|426255424|ref|XP_004021348.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 42 [Ovis aries]
Length = 1264
Score = 248 bits (634), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 143/361 (39%), Positives = 209/361 (57%), Gaps = 27/361 (7%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL+NLGNTCF NA LQC T+T PL + S +H + C EGFC++C ++ HI +
Sbjct: 108 VGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCH--AEGFCMMCTMQAHITQA 165
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
L++ G V+ P +++ + I+ F+ QEDAHEFLQ +D ++ CL+ K + +Q
Sbjct: 166 LSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDR-HTQ 224
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C NC SDT++P +D++LEI+ S+ ALE F K E++ D
Sbjct: 225 ATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQL-D 283
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK--TDGSYVVKIDKHVEFPLELDL 343
E + C KCK+ V K+ + + +V LKRF T G KI K V++P LD+
Sbjct: 284 GENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG----KIAKDVKYPEYLDI 339
Query: 344 KPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
+PY S Q + + Y LYA++ H G + GHYF YI++S W+++NDS V+ +
Sbjct: 340 RPYMS--QPNGEPIIYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRS 397
Query: 404 VLSQDAYILFY-----AKQGTEWVSSLLEAESIGMNADISNSSPKSVLDN-VENDYTSRS 457
VLSQ AY+LFY K G E S A S G SSP+ V+ V N + S
Sbjct: 398 VLSQQAYVLFYIRSHDVKNGGELTHS---AHSPGQ------SSPRPVIGQRVVNSKQAAS 448
Query: 458 G 458
G
Sbjct: 449 G 449
>gi|397526145|ref|XP_003832997.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Pan paniscus]
Length = 1316
Score = 248 bits (634), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 128/313 (40%), Positives = 192/313 (61%), Gaps = 12/313 (3%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL+NLGNTCF NA LQC T+T PL + S +H + C EGFC++C ++ HI +
Sbjct: 109 VGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCH--AEGFCMMCTMQAHITQA 166
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
L++ G V+ P +++ + I+ F+ QEDAHEFLQ +D ++ CL+ K + +Q
Sbjct: 167 LSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDR-HTQ 225
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C NC SDT++P +D++LEI+ S+ ALE F K E++ D
Sbjct: 226 ATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQL-D 284
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK--TDGSYVVKIDKHVEFPLELDL 343
E + C KCK+ V K+ + + +V LKRF T G KI K V++P LD+
Sbjct: 285 GENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG----KIAKDVKYPEYLDI 340
Query: 344 KPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
+PY S Q + + Y LYA++ H G + GHYF YI++S W+++NDS V+ +
Sbjct: 341 RPYMS--QPNGEPIVYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRS 398
Query: 404 VLSQDAYILFYAK 416
VLSQ AY+LFY +
Sbjct: 399 VLSQQAYVLFYIR 411
>gi|410266774|gb|JAA21353.1| ubiquitin specific peptidase 42 [Pan troglodytes]
Length = 1316
Score = 248 bits (634), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 128/313 (40%), Positives = 192/313 (61%), Gaps = 12/313 (3%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL+NLGNTCF NA LQC T+T PL + S +H + C EGFC++C ++ HI +
Sbjct: 109 VGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCH--AEGFCMMCTMQAHITQA 166
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
L++ G V+ P +++ + I+ F+ QEDAHEFLQ +D ++ CL+ K + +Q
Sbjct: 167 LSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDR-HTQ 225
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C NC SDT++P +D++LEI+ S+ ALE F K E++ D
Sbjct: 226 ATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQL-D 284
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK--TDGSYVVKIDKHVEFPLELDL 343
E + C KCK+ V K+ + + +V LKRF T G KI K V++P LD+
Sbjct: 285 GENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG----KIAKDVKYPEYLDI 340
Query: 344 KPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
+PY S Q + + Y LYA++ H G + GHYF YI++S W+++NDS V+ +
Sbjct: 341 RPYMS--QPNGEPIVYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRS 398
Query: 404 VLSQDAYILFYAK 416
VLSQ AY+LFY +
Sbjct: 399 VLSQQAYVLFYIR 411
>gi|49616863|gb|AAT67238.1| ubiquitin specific protease 42 [Homo sapiens]
Length = 1324
Score = 248 bits (634), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 128/313 (40%), Positives = 192/313 (61%), Gaps = 12/313 (3%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL+NLGNTCF NA LQC T+T PL + S +H + C EGFC++C ++ HI +
Sbjct: 109 VGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCH--AEGFCMMCTMQAHITQA 166
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
L++ G V+ P +++ + I+ F+ QEDAHEFLQ +D ++ CL+ K + +Q
Sbjct: 167 LSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDR-HTQ 225
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C NC SDT++P +D++LEI+ S+ ALE F K E++ D
Sbjct: 226 ATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQL-D 284
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK--TDGSYVVKIDKHVEFPLELDL 343
E + C KCK+ V K+ + + +V LKRF T G KI K V++P LD+
Sbjct: 285 GENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG----KIAKDVKYPEYLDI 340
Query: 344 KPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
+PY S Q + + Y LYA++ H G + GHYF YI++S W+++NDS V+ +
Sbjct: 341 RPYMS--QPNGEPIVYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRS 398
Query: 404 VLSQDAYILFYAK 416
VLSQ AY+LFY +
Sbjct: 399 VLSQQAYVLFYIR 411
>gi|383422111|gb|AFH34269.1| ubiquitin carboxyl-terminal hydrolase 42 [Macaca mulatta]
Length = 1317
Score = 248 bits (634), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 128/313 (40%), Positives = 192/313 (61%), Gaps = 12/313 (3%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL+NLGNTCF NA LQC T+T PL + S +H + C EGFC++C ++ HI +
Sbjct: 109 VGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCH--AEGFCMMCTMQAHITQA 166
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
L++ G V+ P +++ + I+ F+ QEDAHEFLQ +D ++ CL+ K + +Q
Sbjct: 167 LSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDR-HTQ 225
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C NC SDT++P +D++LEI+ S+ ALE F K E++ D
Sbjct: 226 ATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQL-D 284
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK--TDGSYVVKIDKHVEFPLELDL 343
E + C KCK+ V K+ + + +V LKRF T G KI K V++P LD+
Sbjct: 285 GENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG----KIAKDVKYPEYLDI 340
Query: 344 KPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
+PY S Q + + Y LYA++ H G + GHYF YI++S W+++NDS V+ +
Sbjct: 341 RPYMS--QPNGEPIVYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRS 398
Query: 404 VLSQDAYILFYAK 416
VLSQ AY+LFY +
Sbjct: 399 VLSQQAYVLFYIR 411
>gi|334332968|ref|XP_001377522.2| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 42 [Monodelphis domestica]
Length = 1371
Score = 248 bits (634), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 130/325 (40%), Positives = 195/325 (60%), Gaps = 13/325 (4%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL+NLGNTCF+NA LQC T+T PL + S +H + C +GFC++C ++ HI +
Sbjct: 109 VGAGLQNLGNTCFVNAALQCLTYTPPLANYMLSHEHSKICH--EQGFCMMCTMQAHITQA 166
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
L + G V+ P ++++L I+ F+ QEDAHEFL+ +D ++ CL+ TK + SQ
Sbjct: 167 LNNPGNVIKPMPVINDLRRIAKHFRFGNQEDAHEFLRYTVDAMQKACLNGSTKLDR-HSQ 225
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C NC SDT++P +D+ LEI+ S+ ALE F K E++ D
Sbjct: 226 ATTLVCQIFGGYLRSRVKCMNCKGVSDTFDPYLDIPLEIKAAQSVNKALEQFVKPEQL-D 284
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E + C KCK+ V K+ + + +V LKRF KI K V++P LD++P
Sbjct: 285 GENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFSG--GKIAKDVKYPEYLDIRP 342
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
Y S Q + + Y LYA++ H G S GHY+ YI++S W+++NDS V+ + VL
Sbjct: 343 YMS--QPNGEPIIYVLYAVLVHTGFSCHAGHYYCYIKASNGQWYQMNDSIVSTSDIRSVL 400
Query: 406 SQDAYILFY-----AKQGTEWVSSL 425
+Q AY+LFY K G E S+
Sbjct: 401 NQQAYVLFYIRSHDVKNGGEHTHSI 425
>gi|73958002|ref|XP_536882.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 isoform 1
[Canis lupus familiaris]
Length = 1331
Score = 248 bits (634), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 128/313 (40%), Positives = 192/313 (61%), Gaps = 12/313 (3%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL+NLGNTCF NA LQC T+T PL + S +H + C EGFC++C ++ HI +
Sbjct: 109 VGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHA--EGFCMMCTMQAHITQA 166
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
L++ G V+ P +++ + I+ F+ QEDAHEFLQ +D ++ CL+ K + +Q
Sbjct: 167 LSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDR-HTQ 225
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C NC SDT++P +D++LEI+ S+ ALE F K E++ D
Sbjct: 226 ATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQL-D 284
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK--TDGSYVVKIDKHVEFPLELDL 343
E + C KCK+ V K+ + + +V LKRF T G KI K V++P LD+
Sbjct: 285 GENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG----KIAKDVKYPEYLDI 340
Query: 344 KPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
+PY S Q + + Y LYA++ H G + GHYF YI++S W+++NDS V+ +
Sbjct: 341 RPYMS--QPNGEPIIYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRS 398
Query: 404 VLSQDAYILFYAK 416
VLSQ AY+LFY +
Sbjct: 399 VLSQQAYVLFYIR 411
>gi|395514662|ref|XP_003761533.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Sarcophilus
harrisii]
Length = 1358
Score = 248 bits (633), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 130/325 (40%), Positives = 195/325 (60%), Gaps = 13/325 (4%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL+NLGNTCF+NA LQC T+T PL + S +H + C +GFC++C ++ HI +
Sbjct: 109 VGAGLQNLGNTCFVNAALQCLTYTPPLANYMLSHEHSKICH--EQGFCMMCTMQAHITQA 166
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
L + G V+ P ++++L I+ F+ QEDAHEFL+ +D ++ CL+ TK + SQ
Sbjct: 167 LNNPGNVIKPMPVINDLRRIAKHFRFGNQEDAHEFLRYTVDAMQKACLNGSTKLDR-HSQ 225
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C NC SDT++P +D+ LEI+ S+ ALE F K E++ D
Sbjct: 226 ATTLVCQIFGGYLRSRVKCMNCKGVSDTFDPYLDIPLEIKAAQSVNKALEQFVKPEQL-D 284
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E + C KCK+ V K+ + + +V LKRF KI K V++P LD++P
Sbjct: 285 GENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFSG--GKIAKDVKYPEYLDIRP 342
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
Y S Q + + Y LYA++ H G S GHY+ YI++S W+++NDS V+ + VL
Sbjct: 343 YMS--QPNGEPIIYVLYAVLVHTGFSCHAGHYYCYIKASNGQWYQMNDSIVSTSDIRSVL 400
Query: 406 SQDAYILFY-----AKQGTEWVSSL 425
+Q AY+LFY K G E S+
Sbjct: 401 NQQAYVLFYIRSHDVKNGGEHTHSI 425
>gi|403285988|ref|XP_003934290.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Saimiri
boliviensis boliviensis]
Length = 1319
Score = 248 bits (633), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 128/313 (40%), Positives = 192/313 (61%), Gaps = 12/313 (3%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL+NLGNTCF NA LQC T+T PL + S +H + C EGFC++C ++ HI +
Sbjct: 109 VGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCH--AEGFCMMCTMQAHITQA 166
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
L++ G V+ P +++ + I+ F+ QEDAHEFLQ +D ++ CL+ K + +Q
Sbjct: 167 LSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDR-HTQ 225
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C NC SDT++P +D++LEI+ S+ ALE F K E++ D
Sbjct: 226 ATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQL-D 284
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK--TDGSYVVKIDKHVEFPLELDL 343
E + C KCK+ V K+ + + +V LKRF T G KI K V++P LD+
Sbjct: 285 GENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG----KIAKDVKYPEYLDI 340
Query: 344 KPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
+PY S Q + + Y LYA++ H G + GHYF YI++S W+++NDS V+ +
Sbjct: 341 RPYMS--QPNGEPIVYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRS 398
Query: 404 VLSQDAYILFYAK 416
VLSQ AY+LFY +
Sbjct: 399 VLSQQAYVLFYIR 411
>gi|432921873|ref|XP_004080264.1| PREDICTED: uncharacterized protein LOC101169567 [Oryzias latipes]
Length = 1080
Score = 248 bits (633), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 126/313 (40%), Positives = 191/313 (61%), Gaps = 13/313 (4%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
+GAGL+N+GNTCF+N+ LQC T+T PL + S +H + C GFC++C +++HI
Sbjct: 111 IGAGLQNMGNTCFLNSALQCLTYTPPLANHMLSREHSKTCQ--EPGFCMMCTMQNHIIQV 168
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
A+SG V+ P +++ L I+ F+ QEDAHEFL+ +D ++ CL D +Q
Sbjct: 169 FANSGNVIKPIGVLNELKRIAKHFRYGSQEDAHEFLRYTVDAMQKSCLPGTKLDRQ--TQ 226
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+ +VFGG L S+++C +C + SDT++P +D++LEI+ S+ ALE F K E++ D
Sbjct: 227 ATTFIHQVFGGYLRSRVKCLSCKAVSDTFDPFLDITLEIKMAPSVSKALEQFVKPEQL-D 285
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK--TDGSYVVKIDKHVEFPLELDL 343
E + C KCK+ V+ K+ + + P+V LKRF T G KI K V++P LDL
Sbjct: 286 GENAYKCTKCKKMVTASKRFTIHRSPNVLTLSLKRFANFTGG----KITKDVKYPESLDL 341
Query: 344 KPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
+P+ S Q+ Y LYA++ H G S GHYF YI++S W+++NDS V+ +
Sbjct: 342 RPFMS--QSQGEPQNYGLYAVLVHSGFSCHAGHYFCYIKASNGQWYQMNDSSVSVSDIRS 399
Query: 404 VLSQDAYILFYAK 416
VL+Q AY+LFY K
Sbjct: 400 VLNQQAYVLFYIK 412
>gi|344289865|ref|XP_003416661.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Loxodonta
africana]
Length = 1431
Score = 248 bits (633), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 128/313 (40%), Positives = 192/313 (61%), Gaps = 12/313 (3%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL+NLGNTCF NA LQC T+T PL + S +H + C EGFC++C ++ HI +
Sbjct: 109 VGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHA--EGFCMMCTMQAHITQA 166
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
L++ G V+ P +++ + I+ F+ QEDAHEFLQ +D ++ CL+ K + +Q
Sbjct: 167 LSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQHTVDAMQKACLNGSNKLDR-HTQ 225
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C NC SDT++P +D++LEI+ S+ ALE F K E++ D
Sbjct: 226 ATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQL-D 284
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK--TDGSYVVKIDKHVEFPLELDL 343
E + C KCK+ V K+ + + +V LKRF T G KI K V++P LD+
Sbjct: 285 GENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG----KIAKDVKYPEYLDI 340
Query: 344 KPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
+PY S Q + + Y LYA++ H G + GHYF YI++S W+++NDS V+ +
Sbjct: 341 RPYMS--QPNGEPIIYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRS 398
Query: 404 VLSQDAYILFYAK 416
VLSQ AY+LFY +
Sbjct: 399 VLSQQAYVLFYIR 411
>gi|395852854|ref|XP_003798945.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Otolemur
garnettii]
Length = 1330
Score = 248 bits (633), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 131/326 (40%), Positives = 196/326 (60%), Gaps = 17/326 (5%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL+NLGNTCF NA LQC T+T PL + S +H + C EGFC++C ++ HI +
Sbjct: 109 VGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHA--EGFCMMCIMQAHITQA 166
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
L++ G V+ P +++ + I+ F+ QEDAHEFLQ +D ++ CL+ K + +Q
Sbjct: 167 LSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDR-HTQ 225
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
V ++FGG L S+++C NC SDT++P +D++LEI+ ++ ALE F K E++ D
Sbjct: 226 ATTFVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQTVNKALEQFVKPEQL-D 284
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK--TDGSYVVKIDKHVEFPLELDL 343
E + C KCK+ V+ K+ + + +V LKRF T G KI K V++P LD+
Sbjct: 285 GENAYKCSKCKKMVTASKRFTIHRSSNVLTLSLKRFANFTGG----KIAKDVKYPEYLDI 340
Query: 344 KPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
+PY S Q + + Y LYA++ H G + GHYF YI++S W+++NDS V+ +
Sbjct: 341 RPYMS--QPNGEPIIYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRS 398
Query: 404 VLSQDAYILFY-----AKQGTEWVSS 424
VLSQ AY+LFY K G+E S
Sbjct: 399 VLSQQAYVLFYIRSHDVKNGSELAHS 424
>gi|410984363|ref|XP_003998498.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Felis catus]
Length = 1304
Score = 248 bits (632), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 128/313 (40%), Positives = 192/313 (61%), Gaps = 12/313 (3%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL+NLGNTCF NA LQC T+T PL + S +H + C EGFC++C ++ HI +
Sbjct: 109 VGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCH--AEGFCMMCTMQAHITQA 166
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
L++ G V+ P +++ + I+ F+ QEDAHEFLQ +D ++ CL+ K + +Q
Sbjct: 167 LSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDR-HTQ 225
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C NC SDT++P +D++LEI+ S+ ALE F K E++ D
Sbjct: 226 ATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQL-D 284
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK--TDGSYVVKIDKHVEFPLELDL 343
E + C KCK+ V K+ + + +V LKRF T G KI K V++P LD+
Sbjct: 285 GENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG----KIAKDVKYPEYLDI 340
Query: 344 KPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
+PY S Q + + Y LYA++ H G + GHYF YI++S W+++NDS V+ +
Sbjct: 341 RPYMS--QPNGEPIIYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRS 398
Query: 404 VLSQDAYILFYAK 416
VLSQ AY+LFY +
Sbjct: 399 VLSQQAYVLFYIR 411
>gi|157786872|ref|NP_001099379.1| ubiquitin carboxyl-terminal hydrolase 42 [Rattus norvegicus]
gi|322967640|sp|D3ZU96.1|UBP42_RAT RecName: Full=Ubiquitin carboxyl-terminal hydrolase 42; AltName:
Full=Deubiquitinating enzyme 42; AltName: Full=Ubiquitin
thioesterase 42; AltName:
Full=Ubiquitin-specific-processing protease 42
gi|149034935|gb|EDL89655.1| ubiquitin specific protease 42 (predicted) [Rattus norvegicus]
Length = 1325
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 127/313 (40%), Positives = 192/313 (61%), Gaps = 12/313 (3%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL+NLGNTCF NA LQC T+T PL + S +H + C EGFC++C ++ HI +
Sbjct: 108 VGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHA--EGFCMMCTMQTHITQA 165
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
L++ G V+ P +++ + I+ F+ QEDAHEFLQ +D ++ CL+ K + +Q
Sbjct: 166 LSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDR-HTQ 224
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C NC SDT++P +D++LEI+ S+ ALE F K E++ D
Sbjct: 225 ATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVTKALEQFVKPEQL-D 283
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK--TDGSYVVKIDKHVEFPLELDL 343
E + C KCK+ V K+ + + +V LKRF T G KI K V++P LD+
Sbjct: 284 GENSYKCSKCKKMVPASKRFTIHRSSNVLTISLKRFANFTGG----KIAKDVKYPEYLDI 339
Query: 344 KPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
+PY S Q + + Y LYA++ H G + GHYF YI++S W+++NDS V+ +
Sbjct: 340 RPYMS--QPNGEPIIYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRS 397
Query: 404 VLSQDAYILFYAK 416
VL+Q AY+LFY +
Sbjct: 398 VLNQQAYVLFYIR 410
>gi|37722101|gb|AAR01977.1| DUB1 [Mus musculus]
Length = 729
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 127/313 (40%), Positives = 192/313 (61%), Gaps = 12/313 (3%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL+NLGNTCF NA LQC T+T PL + S +H + C EGFC++C ++ HI +
Sbjct: 108 VGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHA--EGFCMMCTMQTHITQA 165
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
L++ G V+ P +++ + I+ F+ QEDAHEFLQ +D ++ CL+ K + +Q
Sbjct: 166 LSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDR-HTQ 224
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C NC SDT++P +D++LEI+ S+ ALE F K E++ D
Sbjct: 225 ATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVTKALEQFVKPEQL-D 283
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK--TDGSYVVKIDKHVEFPLELDL 343
E + C KCK+ V K+ + + +V LKRF T G KI K V++P LD+
Sbjct: 284 GENSYKCSKCKKMVPASKRFTIHRSSNVLTISLKRFANFTGG----KIAKDVKYPEYLDI 339
Query: 344 KPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
+PY S Q + + Y LYA++ H G + GHYF YI++S W+++NDS V+ +
Sbjct: 340 RPYMS--QPNGEPIIYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRA 397
Query: 404 VLSQDAYILFYAK 416
VL+Q AY+LFY +
Sbjct: 398 VLNQQAYVLFYIR 410
>gi|443717815|gb|ELU08703.1| hypothetical protein CAPTEDRAFT_136598 [Capitella teleta]
Length = 442
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 117/324 (36%), Positives = 197/324 (60%), Gaps = 12/324 (3%)
Query: 93 VEKHWPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGF 152
V+ WP + +GAGL NLGNTCF+N++LQC T+T PLV L S +H C GF
Sbjct: 114 VKLQWPAVRR---IGAGLTNLGNTCFLNSVLQCLTYTPPLVNYLSSSEHAHTCKQV--GF 168
Query: 153 CVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCC 212
C++C L+ H + G+ + P ++ + I+ +QEDAHEFL+ ++D ++ C
Sbjct: 169 CMVCELQRHFRRCYENGGQAIKPHAILQKIKLIAKHMHWGRQEDAHEFLRYVIDAMQKSC 228
Query: 213 LDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGS 272
L+ TK + +S + ++ ++FGG L S++ C C + S+TY+P +D+S+++++V ++
Sbjct: 229 LNGNTKLDRISKE-TTVINQIFGGFLRSQVVCLKCKAKSNTYDPFLDISVDVKNVPNIQK 287
Query: 273 ALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKID 332
A E F + E++ D + + C KCK++V+ +K+ + K +V LKR+ G K+
Sbjct: 288 AFEKFVQPEQL-DLDNAYNCTKCKQKVAAQKRFTIHKPSNVLTIQLKRYGVMGG---KVT 343
Query: 333 KHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLN 392
+H+ FP +L+++PY S Q + + Y LYA++ HMG S GHY+ Y+RSS W+ +N
Sbjct: 344 RHISFPEKLNIRPYMSVSQGAAIT--YQLYAVLVHMGHSTNSGHYYCYVRSSNQAWYCMN 401
Query: 393 DSRVTRVEEEFVLSQDAYILFYAK 416
DS V + + VL+ +AY+LFY +
Sbjct: 402 DSMVQQTSQGRVLNSEAYMLFYIR 425
>gi|116686116|ref|NP_084025.2| ubiquitin carboxyl-terminal hydrolase 42 [Mus musculus]
gi|322967639|sp|B2RQC2.1|UBP42_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 42; AltName:
Full=Deubiquitinating enzyme 42; AltName: Full=Ubiquitin
thioesterase 42; AltName:
Full=Ubiquitin-specific-processing protease 42
gi|148687090|gb|EDL19037.1| ubiquitin specific peptidase 42 [Mus musculus]
gi|187953717|gb|AAI37853.1| Ubiquitin specific peptidase 42 [Mus musculus]
Length = 1324
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 127/313 (40%), Positives = 192/313 (61%), Gaps = 12/313 (3%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL+NLGNTCF NA LQC T+T PL + S +H + C EGFC++C ++ HI +
Sbjct: 108 VGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHA--EGFCMMCTMQTHITQA 165
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
L++ G V+ P +++ + I+ F+ QEDAHEFLQ +D ++ CL+ K + +Q
Sbjct: 166 LSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDR-HTQ 224
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C NC SDT++P +D++LEI+ S+ ALE F K E++ D
Sbjct: 225 ATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVTKALEQFVKPEQL-D 283
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK--TDGSYVVKIDKHVEFPLELDL 343
E + C KCK+ V K+ + + +V LKRF T G KI K V++P LD+
Sbjct: 284 GENSYKCSKCKKMVPASKRFTIHRSSNVLTISLKRFANFTGG----KIAKDVKYPEYLDI 339
Query: 344 KPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
+PY S Q + + Y LYA++ H G + GHYF YI++S W+++NDS V+ +
Sbjct: 340 RPYMS--QPNGEPIIYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRA 397
Query: 404 VLSQDAYILFYAK 416
VL+Q AY+LFY +
Sbjct: 398 VLNQQAYVLFYIR 410
>gi|354467793|ref|XP_003496353.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42-like
[Cricetulus griseus]
Length = 1285
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 127/313 (40%), Positives = 192/313 (61%), Gaps = 12/313 (3%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL+NLGNTCF NA LQC T+T PL + S +H + C EGFC++C ++ HI +
Sbjct: 108 VGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHA--EGFCMMCIMQTHITQA 165
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
L++ G V+ P +++ + I+ F+ QEDAHEFLQ +D ++ CL+ K + +Q
Sbjct: 166 LSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDR-HTQ 224
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C NC SDT++P +D++LEI+ S+ ALE F K E++ D
Sbjct: 225 ATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVTKALEQFVKPEQL-D 283
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK--TDGSYVVKIDKHVEFPLELDL 343
E + C KCK+ V K+ + + +V LKRF T G KI K V++P LD+
Sbjct: 284 GENSYKCSKCKKMVPASKRFTIHRSSNVLTISLKRFANFTGG----KIAKDVKYPEYLDI 339
Query: 344 KPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
+PY S Q + + Y LYA++ H G + GHYF YI++S W+++NDS V+ +
Sbjct: 340 RPYMS--QPNGEPIIYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRS 397
Query: 404 VLSQDAYILFYAK 416
VL+Q AY+LFY +
Sbjct: 398 VLNQQAYVLFYIR 410
>gi|390459112|ref|XP_002744123.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Callithrix
jacchus]
Length = 1319
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 128/313 (40%), Positives = 191/313 (61%), Gaps = 12/313 (3%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL+NLGNTCF NA LQC T+T PL + S +H + C EGFC++C ++ HI +
Sbjct: 109 VGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCH--AEGFCMMCTMQAHITQA 166
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
L++ G V+ P +++ + I+ F+ QEDAHEFLQ +D ++ CL+ K + +Q
Sbjct: 167 LSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDR-HTQ 225
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C NC SDT++P +D++LEI+ S+ ALE F K E++ D
Sbjct: 226 ATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQL-D 284
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK--TDGSYVVKIDKHVEFPLELDL 343
E + C KCK+ V K+ + + +V LKRF T G KI K V++P LD+
Sbjct: 285 GENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG----KIAKDVKYPEYLDI 340
Query: 344 KPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
+PY S Q + + Y LYA++ H G + GHYF YI++ W+++NDS V+ +
Sbjct: 341 RPYMS--QPNGEPIVYVLYAVLVHTGFNCHAGHYFCYIKAINGLWYQMNDSIVSTSDIRS 398
Query: 404 VLSQDAYILFYAK 416
VLSQ AY+LFY K
Sbjct: 399 VLSQQAYVLFYIK 411
>gi|413955111|gb|AFW87760.1| putative ubiquitin carboxyl-terminal hydrolase superfamily protein
[Zea mays]
Length = 813
Score = 245 bits (626), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 149/380 (39%), Positives = 212/380 (55%), Gaps = 31/380 (8%)
Query: 63 DDYEEIYRDTRPISSSYGRYNWGSSLLSRPVEKHWP-----IQIKPTGVGAGLENLG-NT 116
DDY + P RYN GS WP + + V AGL N T
Sbjct: 90 DDYWSPWPSPEP-DQRMERYNSGSCW-------SWPSPEPDCEKERYTVAAGLSNPHLWT 141
Query: 117 CFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLASSGKVLSPR 176
CF+N +LQC HT+PL+ LR DHP PC + GFC C+L+ H++ + SG P
Sbjct: 142 CFLNCVLQCMVHTVPLLLKLRKADHPDPCPRVSIGFCCYCSLKHHVDECMRLSGSSFYPE 201
Query: 177 KLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSK------TKDESLSSQGDNIV 230
V++L ISS F+ Q+DA EFL+CLLD+L+ + + + +ES S++ ++V
Sbjct: 202 IFVNHLKSISSNFRSGVQQDAQEFLRCLLDKLDEDSIAPRFSEESSSSEESSSTEEGSVV 261
Query: 231 QRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIEDPETKF 290
+ +F GCL S+L+C C SD EP +DLSL++ V +L AL+SFT E I+D F
Sbjct: 262 KEIFSGCLKSQLRCPECNHYSDKSEPFLDLSLDLNMVETLMDALQSFTNTELIKD----F 317
Query: 291 TCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPYTSGG 350
C+ CK +V++EK +++ P V HLKRF ++ KI V+FP+ELD+ + S
Sbjct: 318 MCDGCKSRVNLEKHFKIEQAPEVLVIHLKRFT---NFESKIRDKVKFPIELDINSFMS-- 372
Query: 351 QNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAY 410
+ D KY LY +VEH+G+ + GHY YIRSS W++ ND +V + L AY
Sbjct: 373 SSDDTLQKYDLYGVVEHLGAYGS-GHYVCYIRSSEADWYKFNDDKVCKCSVASALDSAAY 431
Query: 411 ILFYAKQGTE-WVSSLLEAE 429
+LFY KQG+ W S+LLE E
Sbjct: 432 LLFYVKQGSSPWFSTLLEKE 451
>gi|335302607|ref|XP_003359505.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Sus scrofa]
Length = 517
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 138/353 (39%), Positives = 202/353 (57%), Gaps = 31/353 (8%)
Query: 92 PVEKHWPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEG 151
PV P+ +P+ VGAGL+NLGNTC++NA+LQC THT PL +L + H R C +
Sbjct: 64 PVPTKGPLSWRPSVVGAGLQNLGNTCYVNAVLQCLTHTPPLAISLLNGQHQRACQ--KQP 121
Query: 152 FCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESC 211
FC++CA+R H+ +L G V+ PRK + ++S F R++QEDAHEFL LD ++ C
Sbjct: 122 FCMLCAVRAHVTRALLHPGDVIQPRK-----DLVAS-FHRHRQEDAHEFLMFALDAMQRC 175
Query: 212 CLDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLG 271
+ D ++Q++FGGC S++QC C SDT++P +D++L+I S+
Sbjct: 176 PSE------------DTLIQQIFGGCWRSQIQCLRCLGVSDTFDPYLDVTLDITAAQSVE 223
Query: 272 SALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKI 331
AL K EK+ D E + C C + K+L L + V LKRF TD + K+
Sbjct: 224 QALRELVKAEKL-DGENAYHCGVCLRKGPATKRLTLHRASKVLILVLKRF-TDVTG-DKM 280
Query: 332 DKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRL 391
DK V +P LDL+PY S + L Y L+A++ H G + GHYF YIR+ W+R+
Sbjct: 281 DKKVRYPEHLDLQPYLSVQKAG--ALDYELFAVLVHSGWTCHQGHYFCYIRAGNGWWYRM 338
Query: 392 NDSRVTRVEEEFVLSQDAYILFYAKQGTEWVSSLLEAESIGMNADISNSSPKS 444
+DS+VT + LSQ AY+LFY ++G LE + G +AD + SP +
Sbjct: 339 DDSKVTACDTASALSQSAYVLFYIQRGE------LERATGGASADRAPRSPGA 385
>gi|348502126|ref|XP_003438620.1| PREDICTED: hypothetical protein LOC100709216 [Oreochromis
niloticus]
Length = 1174
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 130/342 (38%), Positives = 204/342 (59%), Gaps = 12/342 (3%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
+GAGL+N+GNTCF+N+ LQC T+T PL + + +H + C GFC++C +++H+
Sbjct: 82 IGAGLQNMGNTCFLNSALQCLTYTPPLANYMLTREHSKTCH--EPGFCMMCTMQNHVIQV 139
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
A+SG V+ P +++ L I+ F+ QEDAHEFL+ +D ++ CL D +Q
Sbjct: 140 FANSGNVIKPIGVLNELKRIAKHFRYGSQEDAHEFLRYTVDAMQKSCLPGTKLDRQ--TQ 197
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+ + +VFGG L S+++C NC + SDT++P +D++LEI+ ++ ALE F K E++ D
Sbjct: 198 ATSFIHQVFGGYLRSRVKCLNCKAVSDTFDPFLDITLEIKTAPNVSKALEQFVKPEQL-D 256
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E + C KCK+ V+ K+ + + +V LKRF KI K V++ LDL+P
Sbjct: 257 GENAYKCTKCKKMVTASKRFTIHRSANVLTLSLKRFANFSG--GKITKDVKYLEHLDLRP 314
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
+ S Q + +L Y LYA++ H G S GHYF YI++S W+++NDS V+ + VL
Sbjct: 315 FMSQSQ-GEPQL-YGLYAVLVHSGFSCHAGHYFCYIKASNGQWYQMNDSSVSVSDIRTVL 372
Query: 406 SQDAYILFYAKQGTEWVSSLLEAESIGMNADISN-SSPKSVL 446
+Q AY+LFY K + V + + NA IS SSP+ V+
Sbjct: 373 NQQAYVLFYIK--STDVKKSGDYSHLNHNAGISGQSSPRPVV 412
>gi|449476389|ref|XP_002192172.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42, partial
[Taeniopygia guttata]
Length = 1282
Score = 242 bits (617), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 127/314 (40%), Positives = 187/314 (59%), Gaps = 12/314 (3%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VG GL+NLGNTCF+N+ LQC T+T PL + S +H + C EGFC++C + HI
Sbjct: 105 VGVGLQNLGNTCFLNSTLQCLTYTPPLANYMLSLEHTKSCH--VEGFCMMCTMESHINQV 162
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
L S + P +++ L I F QEDAHEFL +D L+ CL+ TK + SSQ
Sbjct: 163 LCCSNNAIKPTSVINGLKRIGKHFHFGSQEDAHEFLCFTVDALQKACLNGSTKLDR-SSQ 221
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
++ ++FGG L S+++C NC + SDTYEP +D++L+I+ V S+ ALE F K E++ D
Sbjct: 222 ATTLIYQIFGGYLRSRVKCLNCKAVSDTYEPFLDVTLDIKAVTSVTRALEQFVKPEQL-D 280
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK--TDGSYVVKIDKHVEFPLELDL 343
E + C KCK+ V K+ + + +V LKRF T G KI+K V++P LDL
Sbjct: 281 GENSYKCSKCKKMVPASKRYTIHRSSNVLTISLKRFANFTGG----KINKDVKYPEYLDL 336
Query: 344 KPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
+ Y S Q+ L Y LYA++ H G + GHY +I++ W+R+ND+ V + +
Sbjct: 337 RAYMS--QSIGEPLIYALYAVLVHSGFNCNAGHYLCFIKAGNGLWYRMNDASVELSDIKT 394
Query: 404 VLSQDAYILFYAKQ 417
VL+Q AY+LFY ++
Sbjct: 395 VLNQQAYVLFYIRR 408
>gi|410896095|ref|XP_003961535.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42-like [Takifugu
rubripes]
Length = 1162
Score = 242 bits (617), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 122/311 (39%), Positives = 186/311 (59%), Gaps = 9/311 (2%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
+GAGL+N+GNTCF+N+ LQC T+T P + + +H + C GFC++C +++HI
Sbjct: 81 IGAGLQNMGNTCFLNSALQCLTYTAPFSNYMLTREHSKTCH--EPGFCMMCTMQNHIIQV 138
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
A+SG V+ P +++ L I+ F+ QEDAHEFL+ +D ++ CL D +Q
Sbjct: 139 FANSGNVIKPIGVLNELKRIAKHFRYGSQEDAHEFLRYTVDAMQKSCLPGTKLDRQ--TQ 196
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+ +VFGG L S+++C NC + SDT++P +D+ LEI+ S+ ALE F K E++ D
Sbjct: 197 ATTFIHQVFGGYLRSRVKCLNCKAVSDTFDPFLDIPLEIKTAPSVSKALEQFVKPEQL-D 255
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E + C KCK+ V+ K+ + + +V LKRF KI K V++P LDL+P
Sbjct: 256 GENAYKCTKCKKMVTASKRFTIHRSANVLTLALKRFANFSG--GKITKDVKYPEYLDLRP 313
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
+ S Q+ Y LYA++ H G S GHYF YI++S W+++NDS V+ + VL
Sbjct: 314 FMS--QSQGEPQVYGLYAVLVHSGFSCHAGHYFCYIKASNGQWYQMNDSSVSISDIRSVL 371
Query: 406 SQDAYILFYAK 416
+Q AY+LFY K
Sbjct: 372 NQQAYVLFYIK 382
>gi|342321481|gb|EGU13414.1| Ubiquitin carboxyl-terminal hydrolase [Rhodotorula glutinis ATCC
204091]
Length = 656
Score = 242 bits (617), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 139/370 (37%), Positives = 206/370 (55%), Gaps = 23/370 (6%)
Query: 72 TRPISSSYGRYNWGSSLLSRPVEKH--WPIQIKPTGVGAGLENLGNTCFINAILQCFTHT 129
T P +S++GR GSSL P++ + WP KP VGAGL NLGNTCF+N+ LQ HT
Sbjct: 102 TAPAASTFGR---GSSLFP-PIDTNTSWP---KPFPVGAGLNNLGNTCFLNSALQVLLHT 154
Query: 130 LPLVQALRSFDHPRPCD---GATEGFCVICALRDHIELSLASSGKVLSPRKLVDNLNYIS 186
PL++ L S HP + + FC+IC +R +S + SP +V NL I+
Sbjct: 155 PPLLRYLESSQHPSENNCKCKQQKDFCMICTMRACARVSFTGRQRSYSPNPVVRNLKKIA 214
Query: 187 SFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCN 246
+ +QED+HEFL+ +D +++ L K+ + V ++FGG L S++ C
Sbjct: 215 KHMRLGRQEDSHEFLRFSIDAMQAAALYGKSPKLEQKIKETTFVHQIFGGRLRSRVHCLA 274
Query: 247 CGSCSDTYEPLIDLSLEIED-VGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQL 305
CG SDT++ ++DLSL++ + +L AL++F +++K+ + K+ CEKCK+ V+ EK
Sbjct: 275 CGHNSDTFDSILDLSLDLGNRANTLKDALDNFVRIDKLSG-QNKYKCEKCKKLVNAEKYF 333
Query: 306 MLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIV 365
++ P V HLKRF G KI + +P L L PY S N V+ Y LY I+
Sbjct: 334 AIEDAPLVLTVHLKRFSPTGR---KITGQLRYPETLHLGPYMS---NPKVDPSYRLYGII 387
Query: 366 EHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEWVSSL 425
H G P GHY SY+RSS WH +ND V+ + + +DAY+LFY ++ E SL
Sbjct: 388 LHSGGGPHSGHYTSYVRSSSGKWHDMNDDYVSSLSHPPLSDRDAYVLFYVREKGE---SL 444
Query: 426 LEAESIGMNA 435
EA G+ +
Sbjct: 445 KEAIYGGLKS 454
>gi|327264744|ref|XP_003217171.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like [Anolis
carolinensis]
Length = 1114
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 122/311 (39%), Positives = 186/311 (59%), Gaps = 8/311 (2%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL NLGNTCF+N+ LQC T+T PL L S +H R C GFC++C +++H+ +
Sbjct: 118 VGAGLHNLGNTCFLNSTLQCLTYTPPLANYLLSKEHSRSCHQG--GFCMMCIMQNHMIQA 175
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
A+SG + P + +L I+ F+ QEDAHEFL+ +D ++ CL+ TK + +Q
Sbjct: 176 FANSGNAIKPVSFIRDLKKIARHFRFGSQEDAHEFLRYTIDAMQKACLNGYTKLDR-QTQ 234
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C C S SDTY+P +D++LEI ++ ALE F K + +
Sbjct: 235 ATTLVHQIFGGYLRSRVKCSMCKSVSDTYDPFLDVALEIRQAANIVRALELFVKADVLSG 294
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E + C KCK++V K+ + + +V LKRF KI K V +P L+++P
Sbjct: 295 -ENAYMCAKCKKKVPASKRFTIHRASNVLTISLKRFANFSGG--KITKDVGYPEFLNIRP 351
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
Y S Q+S + Y LYA++ H G S GHY+ Y+++S W+++NDS V + VL
Sbjct: 352 YMS--QSSGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNIKVVL 409
Query: 406 SQDAYILFYAK 416
+Q AY+LFY +
Sbjct: 410 NQQAYVLFYLR 420
>gi|380790487|gb|AFE67119.1| ubiquitin carboxyl-terminal hydrolase 36 [Macaca mulatta]
gi|383411117|gb|AFH28772.1| ubiquitin carboxyl-terminal hydrolase 36 [Macaca mulatta]
Length = 1123
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 121/311 (38%), Positives = 185/311 (59%), Gaps = 8/311 (2%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL NLGNTCF+NA +QC T+T PL L S +H R C + FC++C +++HI +
Sbjct: 120 VGAGLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGS--FCMLCVMQNHIVQA 177
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
A+SG + P + +L I+ F+ QEDAHEFL+ +D ++ CL+ K + +Q
Sbjct: 178 FANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDR-QTQ 236
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C C S SDTY+P +D++LEI ++ ALE F K + +
Sbjct: 237 ATTLVHQIFGGYLRSRVKCSMCKSVSDTYDPYLDVALEIRQAANIVRALELFVKADVLSG 296
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E + C KCK++V K+ + + +V LKRF KI K V +P L+++P
Sbjct: 297 -ENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGG--KITKDVGYPEFLNIRP 353
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
Y S QN+ + Y LYA++ H G S GHY+ Y+++S W+++NDS V + VL
Sbjct: 354 YMS--QNNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVL 411
Query: 406 SQDAYILFYAK 416
+Q AY+LFY +
Sbjct: 412 NQQAYVLFYLR 422
>gi|116284123|gb|AAH16487.1| USP36 protein [Homo sapiens]
Length = 963
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 121/311 (38%), Positives = 185/311 (59%), Gaps = 8/311 (2%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL NLGNTCF+NA +QC T+T PL L S +H R C + FC++C +++HI +
Sbjct: 120 VGAGLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGS--FCMLCVMQNHIVQA 177
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
A+SG + P + +L I+ F+ QEDAHEFL+ +D ++ CL+ K + +Q
Sbjct: 178 FANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDR-QTQ 236
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C C S SDTY+P +D++LEI ++ ALE F K + +
Sbjct: 237 ATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDIALEIRQAANIVRALELFVKADVLSG 296
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E + C KCK++V K+ + + +V LKRF KI K V +P L+++P
Sbjct: 297 -ENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGG--KITKDVGYPEFLNIRP 353
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
Y S QN+ + Y LYA++ H G S GHY+ Y+++S W+++NDS V + VL
Sbjct: 354 YMS--QNNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVL 411
Query: 406 SQDAYILFYAK 416
+Q AY+LFY +
Sbjct: 412 NQQAYVLFYLR 422
>gi|47226066|emb|CAG04440.1| unnamed protein product [Tetraodon nigroviridis]
Length = 535
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 121/311 (38%), Positives = 186/311 (59%), Gaps = 9/311 (2%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
+G+GL+N+GNTCF+N+ LQC T+T P + + +H + C GFC++C +++HI
Sbjct: 27 IGSGLQNMGNTCFLNSALQCLTYTAPFANYMLTREHSKTCH--EPGFCMMCTMQNHIIQV 84
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
A++G V+ P +++ L I+ F+ QEDAHEFL+ +D ++ CL D +Q
Sbjct: 85 FANTGNVIKPIGVLNELKRIAKHFRYGSQEDAHEFLRYTVDAMQKSCLPGTKLDRQ--TQ 142
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+ +VFGG L S+++C NC + SDT++P +D+ LEI+ S+ ALE F K E++ D
Sbjct: 143 ATTFIHQVFGGYLRSRVKCLNCKAVSDTFDPFLDIPLEIKTAPSVSKALEQFVKPEQL-D 201
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E + C KCK+ V+ K+ + + +V LKRF KI K V++P LDL+P
Sbjct: 202 GENAYKCTKCKKMVTASKRFTIHRSANVLTLALKRFANFSG--GKITKDVKYPEYLDLRP 259
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
+ S Q+ Y LYA++ H G S GHYF YI++S W+++NDS V+ + VL
Sbjct: 260 FMS--QSQGEPQVYGLYAVLVHSGFSCHAGHYFCYIKASNGQWYQMNDSSVSISDIRSVL 317
Query: 406 SQDAYILFYAK 416
SQ AY+LFY K
Sbjct: 318 SQQAYVLFYIK 328
>gi|426346503|ref|XP_004040916.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Gorilla
gorilla gorilla]
Length = 1123
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 121/311 (38%), Positives = 185/311 (59%), Gaps = 8/311 (2%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL NLGNTCF+NA +QC T+T PL L S +H R C + FC++C +++HI +
Sbjct: 120 VGAGLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGS--FCMLCVMQNHIVQA 177
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
A+SG + P + +L I+ F+ QEDAHEFL+ +D ++ CL+ K + +Q
Sbjct: 178 FANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDR-QTQ 236
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C C S SDTY+P +D++LEI ++ ALE F K + +
Sbjct: 237 ATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIRQAANIVRALELFVKADVLSG 296
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E + C KCK++V K+ + + +V LKRF KI K V +P L+++P
Sbjct: 297 -ENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGG--KITKDVGYPEFLNIRP 353
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
Y S QN+ + Y LYA++ H G S GHY+ Y+++S W+++NDS V + VL
Sbjct: 354 YMS--QNNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVL 411
Query: 406 SQDAYILFYAK 416
+Q AY+LFY +
Sbjct: 412 NQQAYVLFYLR 422
>gi|384941532|gb|AFI34371.1| ubiquitin carboxyl-terminal hydrolase 36 [Macaca mulatta]
Length = 1123
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 121/311 (38%), Positives = 185/311 (59%), Gaps = 8/311 (2%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL NLGNTCF+NA +QC T+T PL L S +H R C + FC++C +++HI +
Sbjct: 120 VGAGLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGS--FCMLCVMQNHIVQA 177
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
A+SG + P + +L I+ F+ QEDAHEFL+ +D ++ CL+ K + +Q
Sbjct: 178 FANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDR-QTQ 236
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C C S SDTY+P +D++LEI ++ ALE F K + +
Sbjct: 237 ATTLVHQIFGGYLRSRVKCSMCKSVSDTYDPYLDVALEIRQAANIVRALELFVKADVLSG 296
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E + C KCK++V K+ + + +V LKRF KI K V +P L+++P
Sbjct: 297 -ENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGG--KITKDVGYPEFLNIRP 353
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
Y S QN+ + Y LYA++ H G S GHY+ Y+++S W+++NDS V + VL
Sbjct: 354 YMS--QNNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVL 411
Query: 406 SQDAYILFYAK 416
+Q AY+LFY +
Sbjct: 412 NQQAYVLFYLR 422
>gi|402901257|ref|XP_003913570.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Papio anubis]
Length = 1123
Score = 239 bits (610), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 121/311 (38%), Positives = 185/311 (59%), Gaps = 8/311 (2%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL NLGNTCF+NA +QC T+T PL L S +H R C + FC++C +++HI +
Sbjct: 120 VGAGLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGS--FCMLCVMQNHIVQA 177
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
A+SG + P + +L I+ F+ QEDAHEFL+ +D ++ CL+ K + +Q
Sbjct: 178 FANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDR-QTQ 236
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C C S SDTY+P +D++LEI ++ ALE F K + +
Sbjct: 237 ATTLVHQIFGGYLRSRVKCSMCKSVSDTYDPYLDVALEIRQAANIVRALELFVKADVLSG 296
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E + C KCK++V K+ + + +V LKRF KI K V +P L+++P
Sbjct: 297 -ENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGG--KITKDVGYPEFLNIRP 353
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
Y S QN+ + Y LYA++ H G S GHY+ Y+++S W+++NDS V + VL
Sbjct: 354 YMS--QNNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVL 411
Query: 406 SQDAYILFYAK 416
+Q AY+LFY +
Sbjct: 412 NQQAYVLFYLR 422
>gi|297701928|ref|XP_002827948.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Pongo abelii]
Length = 1124
Score = 239 bits (610), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 121/311 (38%), Positives = 185/311 (59%), Gaps = 8/311 (2%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL NLGNTCF+NA +QC T+T PL L S +H R C + FC++C +++HI +
Sbjct: 121 VGAGLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGS--FCMLCVMQNHIVQA 178
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
A+SG + P + +L I+ F+ QEDAHEFL+ +D ++ CL+ K + +Q
Sbjct: 179 FANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDR-QTQ 237
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C C S SDTY+P +D++LEI ++ ALE F K + +
Sbjct: 238 ATTLVHQIFGGYLRSRVKCSMCKSVSDTYDPYLDVALEIRQAANIVRALELFVKADVLSG 297
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E + C KCK++V K+ + + +V LKRF KI K V +P L+++P
Sbjct: 298 -ENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGG--KITKDVGYPEFLNIRP 354
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
Y S QN+ + Y LYA++ H G S GHY+ Y+++S W+++NDS V + VL
Sbjct: 355 YMS--QNNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVL 412
Query: 406 SQDAYILFYAK 416
+Q AY+LFY +
Sbjct: 413 NQQAYVLFYLR 423
>gi|410052277|ref|XP_001146571.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Pan
troglodytes]
Length = 1037
Score = 239 bits (610), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 121/311 (38%), Positives = 185/311 (59%), Gaps = 8/311 (2%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL NLGNTCF+NA +QC T+T PL L S +H R C + FC++C +++HI +
Sbjct: 120 VGAGLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGS--FCMLCVMQNHIVQA 177
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
A+SG + P + +L I+ F+ QEDAHEFL+ +D ++ CL+ K + +Q
Sbjct: 178 FANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDR-QTQ 236
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C C S SDTY+P +D++LEI ++ ALE F K + +
Sbjct: 237 ATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIRQAANIVRALELFVKADVLSG 296
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E + C KCK++V K+ + + +V LKRF KI K V +P L+++P
Sbjct: 297 -ENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGG--KITKDVGYPEFLNIRP 353
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
Y S QN+ + Y LYA++ H G S GHY+ Y+++S W+++NDS V + VL
Sbjct: 354 YMS--QNNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVL 411
Query: 406 SQDAYILFYAK 416
+Q AY+LFY +
Sbjct: 412 NQQAYVLFYLR 422
>gi|47940448|gb|AAH71582.1| USP36 protein [Homo sapiens]
Length = 1123
Score = 239 bits (610), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 121/311 (38%), Positives = 185/311 (59%), Gaps = 8/311 (2%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL NLGNTCF+NA +QC T+T PL L S +H R C + FC++C +++HI +
Sbjct: 120 VGAGLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGS--FCMLCVMQNHIVQA 177
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
A+SG + P + +L I+ F+ QEDAHEFL+ +D ++ CL+ K + +Q
Sbjct: 178 FANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDR-QTQ 236
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C C S SDTY+P +D++LEI ++ ALE F K + +
Sbjct: 237 ATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIRQAANIVRALELFVKADVLSG 296
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E + C KCK++V K+ + + +V LKRF KI K V +P L+++P
Sbjct: 297 -ENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGG--KITKDVGYPEFLNIRP 353
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
Y S QN+ + Y LYA++ H G S GHY+ Y+++S W+++NDS V + VL
Sbjct: 354 YMS--QNNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVL 411
Query: 406 SQDAYILFYAK 416
+Q AY+LFY +
Sbjct: 412 NQQAYVLFYLR 422
>gi|410222778|gb|JAA08608.1| ubiquitin specific peptidase 36 [Pan troglodytes]
gi|410266542|gb|JAA21237.1| ubiquitin specific peptidase 36 [Pan troglodytes]
gi|410297248|gb|JAA27224.1| ubiquitin specific peptidase 36 [Pan troglodytes]
gi|410340693|gb|JAA39293.1| ubiquitin specific peptidase 36 [Pan troglodytes]
Length = 1123
Score = 239 bits (610), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 121/311 (38%), Positives = 185/311 (59%), Gaps = 8/311 (2%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL NLGNTCF+NA +QC T+T PL L S +H R C + FC++C +++HI +
Sbjct: 120 VGAGLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGS--FCMLCVMQNHIVQA 177
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
A+SG + P + +L I+ F+ QEDAHEFL+ +D ++ CL+ K + +Q
Sbjct: 178 FANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDR-QTQ 236
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C C S SDTY+P +D++LEI ++ ALE F K + +
Sbjct: 237 ATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIRQAANIVRALELFVKADVLSG 296
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E + C KCK++V K+ + + +V LKRF KI K V +P L+++P
Sbjct: 297 -ENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGG--KITKDVGYPEFLNIRP 353
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
Y S QN+ + Y LYA++ H G S GHY+ Y+++S W+++NDS V + VL
Sbjct: 354 YMS--QNNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVL 411
Query: 406 SQDAYILFYAK 416
+Q AY+LFY +
Sbjct: 412 NQQAYVLFYLR 422
>gi|122114651|ref|NP_079366.3| ubiquitin carboxyl-terminal hydrolase 36 [Homo sapiens]
gi|119609940|gb|EAW89534.1| ubiquitin specific peptidase 36, isoform CRA_b [Homo sapiens]
gi|119609941|gb|EAW89535.1| ubiquitin specific peptidase 36, isoform CRA_b [Homo sapiens]
gi|119609942|gb|EAW89536.1| ubiquitin specific peptidase 36, isoform CRA_b [Homo sapiens]
Length = 1123
Score = 239 bits (610), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 121/311 (38%), Positives = 185/311 (59%), Gaps = 8/311 (2%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL NLGNTCF+NA +QC T+T PL L S +H R C + FC++C +++HI +
Sbjct: 120 VGAGLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGS--FCMLCVMQNHIVQA 177
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
A+SG + P + +L I+ F+ QEDAHEFL+ +D ++ CL+ K + +Q
Sbjct: 178 FANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDR-QTQ 236
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C C S SDTY+P +D++LEI ++ ALE F K + +
Sbjct: 237 ATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIRQAANIVRALELFVKADVLSG 296
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E + C KCK++V K+ + + +V LKRF KI K V +P L+++P
Sbjct: 297 -ENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGG--KITKDVGYPEFLNIRP 353
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
Y S QN+ + Y LYA++ H G S GHY+ Y+++S W+++NDS V + VL
Sbjct: 354 YMS--QNNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVL 411
Query: 406 SQDAYILFYAK 416
+Q AY+LFY +
Sbjct: 412 NQQAYVLFYLR 422
>gi|397494913|ref|XP_003818312.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 36 [Pan paniscus]
Length = 1122
Score = 239 bits (610), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 121/311 (38%), Positives = 185/311 (59%), Gaps = 8/311 (2%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL NLGNTCF+NA +QC T+T PL L S +H R C + FC++C +++HI +
Sbjct: 120 VGAGLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGS--FCMLCVMQNHIVQA 177
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
A+SG + P + +L I+ F+ QEDAHEFL+ +D ++ CL+ K + +Q
Sbjct: 178 FANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDR-QTQ 236
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C C S SDTY+P +D++LEI ++ ALE F K + +
Sbjct: 237 ATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIRQAANIVRALELFVKADVLSG 296
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E + C KCK++V K+ + + +V LKRF KI K V +P L+++P
Sbjct: 297 -ENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGG--KITKDVGYPEFLNIRP 353
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
Y S QN+ + Y LYA++ H G S GHY+ Y+++S W+++NDS V + VL
Sbjct: 354 YMS--QNNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVL 411
Query: 406 SQDAYILFYAK 416
+Q AY+LFY +
Sbjct: 412 NQQAYVLFYLR 422
>gi|432118123|gb|ELK38013.1| Ubiquitin carboxyl-terminal hydrolase 36 [Myotis davidii]
Length = 889
Score = 239 bits (610), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 119/309 (38%), Positives = 184/309 (59%), Gaps = 8/309 (2%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL NLGNTCF+N+ +QC T+T PL L S +H R C + FC++C +++H+ +
Sbjct: 68 VGAGLHNLGNTCFLNSTVQCLTYTPPLANYLLSREHARSCPQGS--FCMLCVMQNHLVQA 125
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
A+SG + P + +L I+ F+ QEDAHEFL+ +D ++ CL K + +Q
Sbjct: 126 FANSGNAIKPVSFIRDLRKIARHFRFGNQEDAHEFLRYTIDAMQKACLSGYAKLDR-QTQ 184
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGGCL S+++C C S SDTY+P +D++LEI ++ ALE F K + +
Sbjct: 185 ATTLVHQIFGGCLRSRVKCSVCKSVSDTYDPYLDVALEIRQAANIVRALELFVKPDALSG 244
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E + C +CK++V K+ + + +V LKRF KI K V +P L+++P
Sbjct: 245 -ENAYMCARCKKKVPASKRFTIHRASNVLTLSLKRFANFSGG--KITKDVGYPEFLNIRP 301
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
Y S Q+S + Y LYA++ H G S GHY+ Y+++S W+++NDS V + VL
Sbjct: 302 YMS--QSSGEPVVYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNIKVVL 359
Query: 406 SQDAYILFY 414
+Q AY+LFY
Sbjct: 360 NQQAYVLFY 368
>gi|168270556|dbj|BAG10071.1| ubiquitin carboxyl-terminal hydrolase 36 [synthetic construct]
Length = 1121
Score = 239 bits (610), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 121/311 (38%), Positives = 185/311 (59%), Gaps = 8/311 (2%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL NLGNTCF+NA +QC T+T PL L S +H R C + FC++C +++HI +
Sbjct: 120 VGAGLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGS--FCMLCVMQNHIVQA 177
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
A+SG + P + +L I+ F+ QEDAHEFL+ +D ++ CL+ K + +Q
Sbjct: 178 FANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDR-QTQ 236
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C C S SDTY+P +D++LEI ++ ALE F K + +
Sbjct: 237 ATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIRQAANIVRALELFVKADVLSG 296
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E + C KCK++V K+ + + +V LKRF KI K V +P L+++P
Sbjct: 297 -ENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGG--KITKDVGYPEFLNIRP 353
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
Y S QN+ + Y LYA++ H G S GHY+ Y+++S W+++NDS V + VL
Sbjct: 354 YMS--QNNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVL 411
Query: 406 SQDAYILFYAK 416
+Q AY+LFY +
Sbjct: 412 NQQAYVLFYLR 422
>gi|395825848|ref|XP_003786132.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Otolemur
garnettii]
Length = 1120
Score = 239 bits (610), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 121/311 (38%), Positives = 185/311 (59%), Gaps = 8/311 (2%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL NLGNTCF+N+ +QC T+T PL L S +H R C + FC++C +++HI +
Sbjct: 119 VGAGLHNLGNTCFLNSTIQCLTYTPPLANYLLSREHARSCHQGS--FCMLCVMQNHIVQA 176
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
A+SG + P + +L I+ F+ QEDAHEFL+ +D ++ CL+ K + +Q
Sbjct: 177 FANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGYAKLDR-QTQ 235
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C C S SDTY+P +D++LEI ++ ALE F K + +
Sbjct: 236 ATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDIALEIRQAANIVRALELFVKPDVLSG 295
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E + C KCK++V K+ + + +V LKRF KI K V +P L+++P
Sbjct: 296 -ENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSG--GKITKDVGYPEFLNIRP 352
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
Y S QNS + Y LYA++ H G S GHY+ Y+++S W++++DS V + VL
Sbjct: 353 YMS--QNSGEPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMDDSLVHPSSGKAVL 410
Query: 406 SQDAYILFYAK 416
SQ AY+LFY +
Sbjct: 411 SQQAYVLFYLR 421
>gi|395533332|ref|XP_003768714.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Sarcophilus
harrisii]
Length = 1142
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 120/311 (38%), Positives = 187/311 (60%), Gaps = 8/311 (2%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL NLGNTCF+N+ +QC T+T PL L S +H R C GFC++C +++H+ +
Sbjct: 120 VGAGLHNLGNTCFLNSTIQCLTYTPPLANYLLSKEHTRNCHQG--GFCMLCVMQNHMIQA 177
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
A+SG + P + +L I+ F+ QEDAHEFL+ ++D ++ CL+ TK + +Q
Sbjct: 178 FANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYIIDAMQKACLNGYTKLDR-QTQ 236
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C C S SDTY+P +D++LEI ++ ALE F K + +
Sbjct: 237 ATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIRQAANIVRALELFVKPDVLSG 296
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E + C KCK++V K+ + + +V LKRF KI K V +P L+++P
Sbjct: 297 -ENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSG--GKITKDVGYPEFLNIRP 353
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
Y S Q++ + Y LYA++ H G S GHY+ Y+++S W+++NDS V + VL
Sbjct: 354 YMS--QSNGDPIMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNIKVVL 411
Query: 406 SQDAYILFYAK 416
+Q AY+LFY +
Sbjct: 412 NQQAYVLFYLR 422
>gi|124056592|sp|Q9P275.3|UBP36_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 36; AltName:
Full=Deubiquitinating enzyme 36; AltName: Full=Ubiquitin
thioesterase 36; AltName:
Full=Ubiquitin-specific-processing protease 36
Length = 1121
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 121/311 (38%), Positives = 185/311 (59%), Gaps = 8/311 (2%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL NLGNTCF+NA +QC T+T PL L S +H R C + FC++C +++HI +
Sbjct: 120 VGAGLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGS--FCMLCVMQNHIVQA 177
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
A+SG + P + +L I+ F+ QEDAHEFL+ +D ++ CL+ K + +Q
Sbjct: 178 FANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDR-QTQ 236
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C C S SDTY+P +D++LEI ++ ALE F K + +
Sbjct: 237 ATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIRQAANIVRALELFVKADVLSG 296
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E + C KCK++V K+ + + +V LKRF KI K V +P L+++P
Sbjct: 297 -ENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGG--KITKDVGYPEFLNIRP 353
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
Y S QN+ + Y LYA++ H G S GHY+ Y+++S W+++NDS V + VL
Sbjct: 354 YMS--QNNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVL 411
Query: 406 SQDAYILFYAK 416
+Q AY+LFY +
Sbjct: 412 NQQAYVLFYLR 422
>gi|7959165|dbj|BAA95977.1| KIAA1453 protein [Homo sapiens]
Length = 1123
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 121/311 (38%), Positives = 185/311 (59%), Gaps = 8/311 (2%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL NLGNTCF+NA +QC T+T PL L S +H R C + FC++C +++HI +
Sbjct: 122 VGAGLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGS--FCMLCVMQNHIVQA 179
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
A+SG + P + +L I+ F+ QEDAHEFL+ +D ++ CL+ K + +Q
Sbjct: 180 FANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDR-QTQ 238
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C C S SDTY+P +D++LEI ++ ALE F K + +
Sbjct: 239 ATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIRQAANIVRALELFVKADVLSG 298
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E + C KCK++V K+ + + +V LKRF KI K V +P L+++P
Sbjct: 299 -ENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGG--KITKDVGYPEFLNIRP 355
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
Y S QN+ + Y LYA++ H G S GHY+ Y+++S W+++NDS V + VL
Sbjct: 356 YMS--QNNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVL 413
Query: 406 SQDAYILFYAK 416
+Q AY+LFY +
Sbjct: 414 NQQAYVLFYLR 424
>gi|116283676|gb|AAH27992.1| USP36 protein [Homo sapiens]
Length = 959
Score = 239 bits (609), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 121/311 (38%), Positives = 185/311 (59%), Gaps = 8/311 (2%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL NLGNTCF+NA +QC T+T PL L S +H R C + FC++C +++HI +
Sbjct: 120 VGAGLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGS--FCMLCVMQNHIVQA 177
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
A+SG + P + +L I+ F+ QEDAHEFL+ +D ++ CL+ K + +Q
Sbjct: 178 FANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDR-QTQ 236
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C C S SDTY+P +D++LEI ++ ALE F K + +
Sbjct: 237 ATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIRQAANIVRALELFVKADVLSG 296
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E + C KCK++V K+ + + +V LKRF KI K V +P L+++P
Sbjct: 297 -ENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGG--KITKDVGYPEFLNIRP 353
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
Y S QN+ + Y LYA++ H G S GHY+ Y+++S W+++NDS V + VL
Sbjct: 354 YMS--QNNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVL 411
Query: 406 SQDAYILFYAK 416
+Q AY+LFY +
Sbjct: 412 NQQAYVLFYLR 422
>gi|119609939|gb|EAW89533.1| ubiquitin specific peptidase 36, isoform CRA_a [Homo sapiens]
Length = 1075
Score = 239 bits (609), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 121/311 (38%), Positives = 185/311 (59%), Gaps = 8/311 (2%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL NLGNTCF+NA +QC T+T PL L S +H R C + FC++C +++HI +
Sbjct: 120 VGAGLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGS--FCMLCVMQNHIVQA 177
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
A+SG + P + +L I+ F+ QEDAHEFL+ +D ++ CL+ K + +Q
Sbjct: 178 FANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDR-QTQ 236
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C C S SDTY+P +D++LEI ++ ALE F K + +
Sbjct: 237 ATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIRQAANIVRALELFVKADVLSG 296
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E + C KCK++V K+ + + +V LKRF KI K V +P L+++P
Sbjct: 297 -ENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGG--KITKDVGYPEFLNIRP 353
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
Y S QN+ + Y LYA++ H G S GHY+ Y+++S W+++NDS V + VL
Sbjct: 354 YMS--QNNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVL 411
Query: 406 SQDAYILFYAK 416
+Q AY+LFY +
Sbjct: 412 NQQAYVLFYLR 422
>gi|7023072|dbj|BAA91825.1| unnamed protein product [Homo sapiens]
Length = 954
Score = 239 bits (609), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 121/311 (38%), Positives = 185/311 (59%), Gaps = 8/311 (2%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL NLGNTCF+NA +QC T+T PL L S +H R C + FC++C +++HI +
Sbjct: 120 VGAGLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGS--FCMLCVMQNHIVQA 177
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
A+SG + P + +L I+ F+ QEDAHEFL+ +D ++ CL+ K + +Q
Sbjct: 178 FANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDR-QTQ 236
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C C S SDTY+P +D++LEI ++ ALE F K + +
Sbjct: 237 ATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIRQAANIVRALELFVKADVLSG 296
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E + C KCK++V K+ + + +V LKRF KI K V +P L+++P
Sbjct: 297 -ENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGG--KITKDVGYPEFLNIRP 353
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
Y S QN+ + Y LYA++ H G S GHY+ Y+++S W+++NDS V + VL
Sbjct: 354 YMS--QNNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVL 411
Query: 406 SQDAYILFYAK 416
+Q AY+LFY +
Sbjct: 412 NQQAYVLFYLR 422
>gi|390463858|ref|XP_003733115.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 36 [Callithrix jacchus]
Length = 1124
Score = 239 bits (609), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 121/311 (38%), Positives = 184/311 (59%), Gaps = 8/311 (2%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL NLGNTCF NA +QC T+T PL L S +H R C + FC++C +++HI +
Sbjct: 119 VGAGLHNLGNTCFFNATIQCLTYTPPLANYLLSKEHARSCHQGS--FCMLCVMQNHIVQA 176
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
A+SG + P + +L I+ F+ QEDAHEFL+ +D ++ CL+ K + +Q
Sbjct: 177 FANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDR-QTQ 235
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C C S SDTY+P +D++LEI ++ ALE F K + +
Sbjct: 236 ATTLVHQIFGGYLRSRVKCSMCKSVSDTYDPYLDIALEIRQAANIVRALELFVKADVLSG 295
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E + C KCK++V K+ + + +V LKRF KI K V +P L+++P
Sbjct: 296 -ENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGG--KITKDVGYPEFLNMRP 352
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
Y S QN+ + Y LYA++ H G S GHY+ Y+++S W+++NDS V + VL
Sbjct: 353 YMS--QNNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVL 410
Query: 406 SQDAYILFYAK 416
+Q AY+LFY +
Sbjct: 411 NQQAYVLFYLR 421
>gi|393246455|gb|EJD53964.1| cysteine proteinase [Auricularia delicata TFB-10046 SS5]
Length = 662
Score = 239 bits (609), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 120/349 (34%), Positives = 193/349 (55%), Gaps = 22/349 (6%)
Query: 96 HWPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVI 155
HWP I+ +G+GL N GNTCF+N+ LQC HT PL+ A+ +HPR C +GFC+
Sbjct: 99 HWPRDIR---IGSGLYNQGNTCFLNSALQCLLHTPPLLHAV--LNHPRDCPAQDDGFCIT 153
Query: 156 CALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDS 215
C+ R + S G SP ++ NL+ I+ +R +QEDAHEFL+ L+D ++ CL
Sbjct: 154 CSFRRVAQDSFKVKGNAFSPSPILHNLHKIAKSLRRGRQEDAHEFLRFLIDAMQKACLHG 213
Query: 216 KTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALE 275
+ K + V RVFGG L S+++CC+C SDT++ ++DLSL+I++ S+ AL+
Sbjct: 214 QPKKVDPAVAEATWVSRVFGGKLRSRVRCCSCNHPSDTFDSILDLSLDIQNASSVHQALK 273
Query: 276 SFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDG---SYVVKID 332
F ++ + + K+ CEKCK+ V+ EKQ +D P HLKRF G ++VV+
Sbjct: 274 HFVAIDHLRGAD-KYKCEKCKKPVNAEKQFTIDSAPLALTVHLKRFTPFGRKLAHVVQYK 332
Query: 333 KHVEFPLELDLKPYTSGGQNSDVE---LKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWH 389
+H+ +G + D + +Y LY ++ H GS P GHY+++ + W+
Sbjct: 333 EHLSL----------AGAMSKDAKEQSPQYKLYGVICHAGSGPNSGHYYAFTKGPNGRWY 382
Query: 390 RLNDSRVTRVEEEFVLSQDAYILFYAKQGTEWVSSLLEAESIGMNADIS 438
+ND V+ + + AY+LFY + ++ ++ ++ G D S
Sbjct: 383 EMNDDAVSLQTRPPLDLKSAYMLFYLRDEASALNDIIATDAKGKGPDRS 431
>gi|432869264|ref|XP_004071701.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like [Oryzias
latipes]
Length = 1055
Score = 239 bits (609), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 121/309 (39%), Positives = 185/309 (59%), Gaps = 8/309 (2%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL NLGNTCF+N+ +QC T+T PL L S +H R C + GFC+IC +++HI +
Sbjct: 120 VGAGLHNLGNTCFLNSTVQCLTYTPPLANYLLSKEHSRTCHQS--GFCMICVMQNHIIQT 177
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
A++G + P + +L I+ F+ QEDAHEFL+ +D ++ CL+ K + +Q
Sbjct: 178 FANTGNAIKPVSFIRDLKKIARHFRFGSQEDAHEFLRYTIDAMQKACLNGYPKLDR-QTQ 236
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C C S SDTY+P +D+++EI ++ ALE F K + +
Sbjct: 237 ATTLVHQIFGGYLRSRVKCSICKSVSDTYDPYLDIAVEIRQTANIVRALELFVKPDVLSG 296
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E + C KCK++V K+ + + +V LKRF KI K V +P L+++P
Sbjct: 297 -ENAYMCAKCKKKVPATKRFTVHRTSNVLTLSLKRFANFSGG--KITKDVGYPEFLNIRP 353
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
Y S Q+S + Y LYA++ H G S GHY+ YI++S W+++NDS V + VL
Sbjct: 354 YMS--QSSGDPVMYGLYAVLVHSGYSCHAGHYYCYIKASNGQWYQMNDSMVQSSNIKVVL 411
Query: 406 SQDAYILFY 414
+Q AY+LFY
Sbjct: 412 NQQAYVLFY 420
>gi|149723495|ref|XP_001491180.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Equus
caballus]
Length = 1122
Score = 238 bits (608), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 122/311 (39%), Positives = 184/311 (59%), Gaps = 8/311 (2%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL NLGNTCF+N+ +QC T+T PL L S +H R C GFC++C +++HI +
Sbjct: 120 VGAGLHNLGNTCFLNSTVQCLTYTPPLANYLLSREHARSCHQG--GFCMLCVMQNHIVQA 177
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
A+SG + P + +L I+ F+ QEDAHEFL+ +D ++ CL K + +Q
Sbjct: 178 FANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLSGCAKLDR-QTQ 236
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C C S SDTY+P +D++LEI ++ ALE F K + +
Sbjct: 237 ATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIRQAANIVRALELFVKPDVLSG 296
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E + C KCK++V K+ + + SV LKRF KI K V +P L+++P
Sbjct: 297 -ENAYMCAKCKKKVPASKRFTIHRTSSVLTLSLKRFANFSGG--KITKDVGYPEFLNIRP 353
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
Y S Q+S + Y LYA++ H G S GHY+ Y+++S W+++NDS V + VL
Sbjct: 354 YMS--QSSGEPVVYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNIKVVL 411
Query: 406 SQDAYILFYAK 416
+Q AY+LFY +
Sbjct: 412 NQQAYVLFYLR 422
>gi|344291363|ref|XP_003417405.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Loxodonta
africana]
Length = 1132
Score = 238 bits (607), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 123/313 (39%), Positives = 186/313 (59%), Gaps = 12/313 (3%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL NLGNTCF+N+ +QC T+T PL L S +H R C GFC++C +++HI +
Sbjct: 120 VGAGLHNLGNTCFLNSTVQCLTYTPPLANYLLSKEHARSCHQG--GFCMLCVMQNHIIQA 177
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
A+SG + P + +L I+ F+ QEDAHEFL+ +D ++ CL+ K + +Q
Sbjct: 178 FANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGYAKLDR-QTQ 236
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C C S SDTY+P +D++LEI ++ ALE F K + +
Sbjct: 237 ATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDIALEIRQAANIVRALEVFVKPDVLSG 296
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK--TDGSYVVKIDKHVEFPLELDL 343
E + C KCK++V K+ + + SV LKRF T G KI K V +P L++
Sbjct: 297 -ENAYMCAKCKKKVPASKRFSIHRASSVLTLSLKRFANFTGG----KITKDVGYPEFLNI 351
Query: 344 KPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
+PY S Q++ + Y LYA++ H G S GHY+ Y++ S W+++NDS V +
Sbjct: 352 RPYMS--QSNGEPVMYGLYAVLVHSGYSCHAGHYYCYVKVSNGQWYQMNDSLVHLSNIKV 409
Query: 404 VLSQDAYILFYAK 416
VL+Q AY+LFY +
Sbjct: 410 VLNQQAYVLFYLR 422
>gi|66820851|ref|XP_643982.1| peptidase C19 family protein [Dictyostelium discoideum AX4]
gi|60472353|gb|EAL70306.1| peptidase C19 family protein [Dictyostelium discoideum AX4]
Length = 919
Score = 238 bits (607), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 114/317 (35%), Positives = 191/317 (60%), Gaps = 9/317 (2%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
+G+GL N+GNTCF+N++LQC T+T+PL + S +H R C + GFC+ C+L + S
Sbjct: 232 IGSGLNNVGNTCFMNSVLQCLTYTVPLANFMMSREHSRQCQAS--GFCIFCSLETQVLQS 289
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
GK ++P+++ N+ I+ F+ +QED+HEF++ +++ L+ L SK S++ +
Sbjct: 290 HKCGGKSITPKEIASNIRKIAPTFRIGRQEDSHEFIRFMIESLQKVSL-SKYPKGSINHR 348
Query: 226 G--DNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKI 283
++ +FGG L S+++C C S+TY+P +DL ++I SL L +F K E +
Sbjct: 349 DAMTTVIGSIFGGYLRSQVKCSQCQYESNTYDPFMDLCVDINQADSLTKGLTNFVKSE-L 407
Query: 284 EDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDL 343
D K+ C KCK+ V +K+L + P + +KRF GSY KI++ ++F L+L
Sbjct: 408 LDGSNKYKCSKCKKLVKAQKRLQIHIAPPILTCQIKRFSFLGSYGGKINRQIQFDQSLNL 467
Query: 344 KPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
P+ + N + Y LYA++ H+G S + GHY+ Y++ S W+ ++DS V++V
Sbjct: 468 SPFMTQSNNHSI---YDLYAVLVHLGGSTSSGHYYCYVKGSNGIWYNMDDSSVSQVSLNT 524
Query: 404 VLSQDAYILFYAKQGTE 420
VLSQ AY+LFY+K+ +
Sbjct: 525 VLSQKAYMLFYSKRNID 541
>gi|345319072|ref|XP_001520693.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36
[Ornithorhynchus anatinus]
Length = 989
Score = 238 bits (607), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 122/311 (39%), Positives = 186/311 (59%), Gaps = 12/311 (3%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL NLGNTCF+N+ +QC T+T PL L S +H R C A GFC++C +++H+ +
Sbjct: 122 VGAGLHNLGNTCFLNSTIQCLTYTPPLANYLLSKEHSRSC--APGGFCMLCVMQNHMIQT 179
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
A+SG + P + +L I+ F+ QEDAHEFL+ +D ++ CL+ K + +Q
Sbjct: 180 FANSGNAIKPFSFIRDLKKIARHFRFGSQEDAHEFLRYTIDAMQKACLNGHAKLDR-QTQ 238
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C C S SDTY+P +D++LEI ++ ALE F K + +
Sbjct: 239 ATTLVHQIFGGYLRSRVKCSLCKSVSDTYDPYLDVALEIRQTANIVRALELFVKPDVLSG 298
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKT--DGSYVVKIDKHVEFPLELDL 343
E + C KCK++V K+ + + +V LKRF G KI K V +P L++
Sbjct: 299 -ENAYMCAKCKKKVPASKRFSIHRASNVLTLSLKRFANFCGG----KITKDVGYPEFLNI 353
Query: 344 KPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
+PY S Q+S + Y LYA++ H G S GHY+ Y+++S W+++NDS V +
Sbjct: 354 RPYMS--QSSGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSSVHSSNIKV 411
Query: 404 VLSQDAYILFY 414
VL+Q AY+LFY
Sbjct: 412 VLNQQAYVLFY 422
>gi|334323020|ref|XP_001371102.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Monodelphis
domestica]
Length = 1133
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 120/311 (38%), Positives = 187/311 (60%), Gaps = 8/311 (2%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL NLGNTCF+N+ +QC T+T PL L S +H R C GFC++C +++H+ +
Sbjct: 120 VGAGLHNLGNTCFLNSTIQCLTYTPPLANYLLSKEHTRNCHQG--GFCMLCVMQNHMIQA 177
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
A+SG + P + +L I+ F+ QEDAHEFL+ ++D ++ CL+ TK + +Q
Sbjct: 178 FANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYIIDAMQKACLNGYTKLDR-QTQ 236
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C C S SDTY+P +D++LEI ++ ALE F K + +
Sbjct: 237 ATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIRQAANIVRALELFVKPDVLSG 296
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E + C KCK++V K+ + + +V LKRF KI K V +P L+++P
Sbjct: 297 -ENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSG--GKITKDVGYPEFLNIRP 353
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
Y S Q++ + Y LYA++ H G S GHY+ Y+++S W+++NDS V + VL
Sbjct: 354 YMS--QSNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNIKVVL 411
Query: 406 SQDAYILFYAK 416
+Q AY+LFY +
Sbjct: 412 NQQAYVLFYLR 422
>gi|10434580|dbj|BAB14306.1| unnamed protein product [Homo sapiens]
gi|37727299|gb|AAO34133.1| deubiquitinating enzyme 1 [Homo sapiens]
Length = 548
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 121/311 (38%), Positives = 185/311 (59%), Gaps = 8/311 (2%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL NLGNTCF+NA +QC T+T PL L S +H R C + FC++C +++HI +
Sbjct: 120 VGAGLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGS--FCMLCVMQNHIVQA 177
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
A+SG + P + +L I+ F+ QEDAHEFL+ +D ++ CL+ K + +Q
Sbjct: 178 FANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDR-QTQ 236
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C C S SDTY+P +D++LEI ++ ALE F K + +
Sbjct: 237 ATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIRQAANIVRALELFVKADVLSG 296
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E + C KCK++V K+ + + +V LKRF KI K V +P L+++P
Sbjct: 297 -ENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSG--GKITKDVGYPEFLNIRP 353
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
Y S QN+ + Y LYA++ H G S GHY+ Y+++S W+++NDS V + VL
Sbjct: 354 YMS--QNNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVL 411
Query: 406 SQDAYILFYAK 416
+Q AY+LFY +
Sbjct: 412 NQQAYVLFYLR 422
>gi|226442882|ref|NP_001028700.1| ubiquitin carboxyl-terminal hydrolase 36 [Mus musculus]
gi|251765139|sp|B1AQJ2.1|UBP36_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 36; AltName:
Full=Deubiquitinating enzyme 36; AltName: Full=Ubiquitin
thioesterase 36; AltName:
Full=Ubiquitin-specific-processing protease 36
Length = 1098
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 120/311 (38%), Positives = 185/311 (59%), Gaps = 8/311 (2%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL NLGNTCF+N+ +QC T+T PL L S +H R C GFC++C +++H+ +
Sbjct: 120 VGAGLHNLGNTCFLNSTIQCLTYTPPLANYLLSKEHARSCHQG--GFCMLCLMQNHMVQA 177
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
A+SG + P + +L I+ F+ QEDAHEFL+ +D ++ CL+ K + +Q
Sbjct: 178 FANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGYAKLDR-QTQ 236
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C C S SDTY+P +D++LEI ++ ALE F K + +
Sbjct: 237 ATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDIALEIRQAANIVRALELFVKSDVLSG 296
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E + C KCK++V K+ + + +V LKRF KI K V +P L+++P
Sbjct: 297 -ENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGG--KITKDVGYPEFLNIRP 353
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
Y S Q+S + Y LYA++ H G S GHY+ Y+++S W+++NDS V + VL
Sbjct: 354 YMS--QSSGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVL 411
Query: 406 SQDAYILFYAK 416
+Q AY+LFY +
Sbjct: 412 NQQAYVLFYLR 422
>gi|148702707|gb|EDL34654.1| mCG13907, isoform CRA_a [Mus musculus]
Length = 1008
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 120/311 (38%), Positives = 185/311 (59%), Gaps = 8/311 (2%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL NLGNTCF+N+ +QC T+T PL L S +H R C GFC++C +++H+ +
Sbjct: 120 VGAGLHNLGNTCFLNSTIQCLTYTPPLANYLLSKEHARSCHQG--GFCMLCLMQNHMVQA 177
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
A+SG + P + +L I+ F+ QEDAHEFL+ +D ++ CL+ K + +Q
Sbjct: 178 FANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGYAKLDR-QTQ 236
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C C S SDTY+P +D++LEI ++ ALE F K + +
Sbjct: 237 ATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDIALEIRQAANIVRALELFVKSDVLSG 296
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E + C KCK++V K+ + + +V LKRF KI K V +P L+++P
Sbjct: 297 -ENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGG--KITKDVGYPEFLNIRP 353
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
Y S Q+S + Y LYA++ H G S GHY+ Y+++S W+++NDS V + VL
Sbjct: 354 YMS--QSSGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVL 411
Query: 406 SQDAYILFYAK 416
+Q AY+LFY +
Sbjct: 412 NQQAYVLFYLR 422
>gi|37360390|dbj|BAC98173.1| mKIAA1453 protein [Mus musculus]
Length = 974
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 120/311 (38%), Positives = 185/311 (59%), Gaps = 8/311 (2%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL NLGNTCF+N+ +QC T+T PL L S +H R C GFC++C +++H+ +
Sbjct: 157 VGAGLHNLGNTCFLNSTIQCLTYTPPLANYLLSKEHARSCHQG--GFCMLCLMQNHMVQA 214
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
A+SG + P + +L I+ F+ QEDAHEFL+ +D ++ CL+ K + +Q
Sbjct: 215 FANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGYAKLDR-QTQ 273
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C C S SDTY+P +D++LEI ++ ALE F K + +
Sbjct: 274 ATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDIALEIRQAANIVRALELFVKSDVLSG 333
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E + C KCK++V K+ + + +V LKRF KI K V +P L+++P
Sbjct: 334 -ENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGG--KITKDVGYPEFLNIRP 390
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
Y S Q+S + Y LYA++ H G S GHY+ Y+++S W+++NDS V + VL
Sbjct: 391 YMS--QSSGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVL 448
Query: 406 SQDAYILFYAK 416
+Q AY+LFY +
Sbjct: 449 NQQAYVLFYLR 459
>gi|34785787|gb|AAH57482.1| Usp42 protein [Danio rerio]
Length = 985
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 121/312 (38%), Positives = 185/312 (59%), Gaps = 11/312 (3%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
+GAGL NLGNTCF+N+ LQC T+T PL + + +H + C GFC++C +++HI
Sbjct: 81 IGAGLHNLGNTCFLNSTLQCLTYTAPLANYMLTREHSKTCH--EPGFCMMCTMQNHIIQV 138
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
A+SG V+ P +++ L I F+ QEDAHEFL+ +D ++ CL D +Q
Sbjct: 139 FANSGNVIKPISVLNELKRIGKHFRFGSQEDAHEFLRYTVDAMQKSCLPGNKLDRQ--TQ 196
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
V ++FGG L S+++C NC + SDT++P +D+SLEI+ +L A E F K E++ D
Sbjct: 197 ATTFVHQIFGGYLRSRVKCLNCKAVSDTFDPYLDISLEIKTAQTLSKAFEQFVKPEQL-D 255
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKT-DGSYVVKIDKHVEFPLELDLK 344
+ + C KCK+ V+ K+ + + +V LKRF +G KI K V + LDL+
Sbjct: 256 GDNAYKCSKCKKMVTASKRFTVHRSSNVLTISLKRFTNFNGG---KITKDVRYAEHLDLR 312
Query: 345 PYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFV 404
P+ S Q+ Y LYA++ H G S GHY+ YI++S W+++NDS V+ + V
Sbjct: 313 PFMS--QSHGEPQIYALYAVLVHSGFSCHAGHYYCYIKASNGQWYQMNDSSVSLSDIRTV 370
Query: 405 LSQDAYILFYAK 416
L+Q AY+LFY +
Sbjct: 371 LNQQAYLLFYIR 382
>gi|148702708|gb|EDL34655.1| mCG13907, isoform CRA_b [Mus musculus]
Length = 1037
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 120/311 (38%), Positives = 185/311 (59%), Gaps = 8/311 (2%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL NLGNTCF+N+ +QC T+T PL L S +H R C GFC++C +++H+ +
Sbjct: 102 VGAGLHNLGNTCFLNSTIQCLTYTPPLANYLLSKEHARSCHQG--GFCMLCLMQNHMVQA 159
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
A+SG + P + +L I+ F+ QEDAHEFL+ +D ++ CL+ K + +Q
Sbjct: 160 FANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGYAKLDR-QTQ 218
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C C S SDTY+P +D++LEI ++ ALE F K + +
Sbjct: 219 ATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDIALEIRQAANIVRALELFVKSDVLSG 278
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E + C KCK++V K+ + + +V LKRF KI K V +P L+++P
Sbjct: 279 -ENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGG--KITKDVGYPEFLNIRP 335
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
Y S Q+S + Y LYA++ H G S GHY+ Y+++S W+++NDS V + VL
Sbjct: 336 YMS--QSSGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVL 393
Query: 406 SQDAYILFYAK 416
+Q AY+LFY +
Sbjct: 394 NQQAYVLFYLR 404
>gi|291415162|ref|XP_002723823.1| PREDICTED: ubiquitin specific peptidase 36 [Oryctolagus cuniculus]
Length = 1054
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 121/309 (39%), Positives = 184/309 (59%), Gaps = 8/309 (2%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL NLGNTCF+N+ +QC T+T PL L S +H R C GFC++C +++HI +
Sbjct: 120 VGAGLHNLGNTCFLNSTVQCLTYTPPLANYLLSQEHARNCHQG--GFCMLCVMQNHIIQA 177
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
A+SG + P + +L I+ F+ QEDAHEFL+ +D ++ CL+ K + +Q
Sbjct: 178 FANSGNAIKPVSFIRDLRKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDR-QTQ 236
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C C S SDTY+P +D++LEI ++ ALE F K + +
Sbjct: 237 ATTLVHQIFGGYLRSRVKCSLCKSVSDTYDPYLDIALEIRQAANIVRALELFVKPDVLSG 296
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E + C KCK++V K+ + + +V LKRF KI K V +P L+++P
Sbjct: 297 -ENAYLCAKCKKKVPASKRFSIHRTSNVLTLSLKRFANFSGG--KITKDVGYPEFLNIRP 353
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
Y S Q+S + Y LYA++ H G S GHY+ Y+++S W+++NDS V + VL
Sbjct: 354 YMS--QSSGEPVTYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVL 411
Query: 406 SQDAYILFY 414
+Q AY+LFY
Sbjct: 412 NQQAYVLFY 420
>gi|148702709|gb|EDL34656.1| mCG13907, isoform CRA_c [Mus musculus]
Length = 1092
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 120/311 (38%), Positives = 185/311 (59%), Gaps = 8/311 (2%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL NLGNTCF+N+ +QC T+T PL L S +H R C GFC++C +++H+ +
Sbjct: 157 VGAGLHNLGNTCFLNSTIQCLTYTPPLANYLLSKEHARSCHQG--GFCMLCLMQNHMVQA 214
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
A+SG + P + +L I+ F+ QEDAHEFL+ +D ++ CL+ K + +Q
Sbjct: 215 FANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGYAKLDR-QTQ 273
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C C S SDTY+P +D++LEI ++ ALE F K + +
Sbjct: 274 ATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDIALEIRQAANIVRALELFVKSDVLSG 333
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E + C KCK++V K+ + + +V LKRF KI K V +P L+++P
Sbjct: 334 -ENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGG--KITKDVGYPEFLNIRP 390
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
Y S Q+S + Y LYA++ H G S GHY+ Y+++S W+++NDS V + VL
Sbjct: 391 YMS--QSSGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVL 448
Query: 406 SQDAYILFYAK 416
+Q AY+LFY +
Sbjct: 449 NQQAYVLFYLR 459
>gi|28502773|gb|AAH47168.1| Usp42 protein [Danio rerio]
Length = 1016
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 121/312 (38%), Positives = 185/312 (59%), Gaps = 11/312 (3%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
+GAGL NLGNTCF+N+ LQC T+T PL + + +H + C GFC++C +++HI
Sbjct: 81 IGAGLHNLGNTCFLNSTLQCLTYTAPLANYMLTREHSKTCH--EPGFCMMCTMQNHIIQV 138
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
A+SG V+ P +++ L I F+ QEDAHEFL+ +D ++ CL D +Q
Sbjct: 139 FANSGNVIKPISVLNELKRIGKHFRFGSQEDAHEFLRYTVDAMQKSCLPGNKLDRQ--TQ 196
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
V ++FGG L S+++C NC + SDT++P +D+SLEI+ +L A E F K E++ D
Sbjct: 197 ATTFVHQIFGGYLRSRVKCLNCKAVSDTFDPYLDISLEIKTAQTLSKAFEQFVKPEQL-D 255
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKT-DGSYVVKIDKHVEFPLELDLK 344
+ + C KCK+ V+ K+ + + +V LKRF +G KI K V + LDL+
Sbjct: 256 GDNAYKCSKCKKMVTASKRFTVHRSSNVLTISLKRFTNFNGG---KITKDVRYAEHLDLR 312
Query: 345 PYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFV 404
P+ S Q+ Y LYA++ H G S GHY+ YI++S W+++NDS V+ + V
Sbjct: 313 PFMS--QSHGEPQIYALYAVLVHSGFSCHAGHYYCYIKASNGQWYQMNDSSVSLSDIRTV 370
Query: 405 LSQDAYILFYAK 416
L+Q AY+LFY +
Sbjct: 371 LNQQAYLLFYIR 382
>gi|348525234|ref|XP_003450127.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Oreochromis
niloticus]
Length = 1149
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 120/309 (38%), Positives = 185/309 (59%), Gaps = 8/309 (2%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL NLGNTCF+N+ +QC T+T PL L S +H R C + GFC+IC +++HI +
Sbjct: 120 VGAGLHNLGNTCFLNSTVQCLTYTPPLANYLLSKEHSRVCHQS--GFCMICVMQNHIIQA 177
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
A++G + P + +L I+ F+ QEDAHEFL+ +D ++ CL+ K + +Q
Sbjct: 178 FANTGNAIKPVSFIRDLKKIARHFRFGSQEDAHEFLRYTIDAMQKACLNGYPKLDR-QTQ 236
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C C S SDTY+P +D+++EI ++ ALE F K + +
Sbjct: 237 ATTLVHQIFGGYLRSRVKCSICKSVSDTYDPYLDIAVEIRQAANIVRALELFVKPDVLSG 296
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E + C KCK++V K+ + + +V LKRF KI K V +P L+++P
Sbjct: 297 -ENAYMCAKCKKKVPATKRFTVHRTSNVLTLSLKRFANFSGG--KITKDVGYPEFLNIRP 353
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
Y S Q+S + Y LYA++ H G S GHY+ Y+++S W+++NDS V + VL
Sbjct: 354 YMS--QSSGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSMVHSSNIKVVL 411
Query: 406 SQDAYILFY 414
+Q AY+LFY
Sbjct: 412 NQQAYVLFY 420
>gi|441643579|ref|XP_003278478.2| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 36 [Nomascus leucogenys]
Length = 1122
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 120/311 (38%), Positives = 185/311 (59%), Gaps = 9/311 (2%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL NLGNTCF+NA +QC T+T PL L S +H R C + FC++C +++HI +
Sbjct: 120 VGAGLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGS--FCMLCVMQNHIVQA 177
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
A+SG + P + +L I+ F+ QEDAHEFL+ +D ++ CL+ K + +Q
Sbjct: 178 FANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDR-QTQ 236
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C C S SDTY+P +D++LEI ++ ALE F K + +
Sbjct: 237 ATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIRQAANIVRALELFVKADVLSG 296
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E + C KCK++V K+ + + +V LKR + KI K V +P L+++P
Sbjct: 297 -ENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRCQLQRG---KITKDVGYPEFLNIRP 352
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
Y S QN+ + Y LYA++ H G S GHY+ Y+++S W+++NDS V + VL
Sbjct: 353 YMS--QNNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVL 410
Query: 406 SQDAYILFYAK 416
+Q AY+LFY +
Sbjct: 411 NQQAYVLFYLR 421
>gi|157820619|ref|NP_001100539.1| ubiquitin carboxyl-terminal hydrolase 36 [Rattus norvegicus]
gi|149054934|gb|EDM06751.1| ubiquitin specific protease 36 (predicted) [Rattus norvegicus]
Length = 1005
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 120/311 (38%), Positives = 185/311 (59%), Gaps = 8/311 (2%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL NLGNTCF+N+ +QC T+T PL L S +H R C + FC++C +++H+ +
Sbjct: 120 VGAGLHNLGNTCFLNSTIQCLTYTPPLANYLLSKEHARSCHQGS--FCMLCVMQNHMVQA 177
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
A+SG + P + +L I+ F+ QEDAHEFL+ +D ++ CL+ K + +Q
Sbjct: 178 FANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGYAKLDR-QTQ 236
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C C S SDTY+P +D++LEI ++ ALE F K + +
Sbjct: 237 ATTLVHQIFGGYLRSRVKCSVCRSVSDTYDPYLDIALEIRQAANIVRALELFVKSDVLSG 296
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E + C KCK++V K+ + + +V LKRF KI K V +P L+++P
Sbjct: 297 -ENAYMCAKCKKKVPASKRFSIHRTSNVLTLSLKRFANFSGG--KITKDVGYPEFLNIRP 353
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
Y S Q+S + Y LYA++ H G S GHY+ Y+++S W+++NDS V + VL
Sbjct: 354 YMS--QSSGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVL 411
Query: 406 SQDAYILFYAK 416
SQ AY+LFY +
Sbjct: 412 SQQAYVLFYLR 422
>gi|405973690|gb|EKC38387.1| Ubiquitin carboxyl-terminal hydrolase 36 [Crassostrea gigas]
Length = 1002
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 120/317 (37%), Positives = 188/317 (59%), Gaps = 10/317 (3%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
+G+GL N+GNTCF+N+ LQC +T PLV S +H + C GFC++C L+ HI+
Sbjct: 97 IGSGLVNMGNTCFLNSTLQCLAYTAPLVNYCFSGEHNQTC--KQPGFCMMCELQRHIKRC 154
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
+SG + P+ ++ L I+ +QEDAHEFL+ ++D ++ L+ K + S +
Sbjct: 155 YENSGSNIKPQAILQKLKMIAKHMHWGRQEDAHEFLRYVVDSMQKSILNGHAKLDKFSKE 214
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S++QC C S+TY+P +D+SL+I+ V SL A E + EK+ D
Sbjct: 215 -TTVVNQIFGGYLRSQVQCLRCKEKSNTYDPFLDISLDIKTVPSLEKAFEKYVLPEKL-D 272
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
+ + C +CK++V K+ + K P+V LKRF KI +HV FP +L+L+P
Sbjct: 273 CDNAYMCNRCKQKVPALKRFSVHKPPNVLTVSLKRFDYSKMVQGKIGRHVHFPEKLNLRP 332
Query: 346 YTS--GGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
Y S GG+ + +HL A++ H G + GHY+ Y+++S +W+ +NDS V +V
Sbjct: 333 YMSNRGGE----PILFHLNAVLVHSGYTANSGHYYCYVKASSGSWYCMNDSNVQQVSVNR 388
Query: 404 VLSQDAYILFYAKQGTE 420
VL +AY+LFY K TE
Sbjct: 389 VLGAEAYVLFYTKAFTE 405
>gi|224075485|ref|XP_002187464.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Taeniopygia
guttata]
Length = 1079
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 122/320 (38%), Positives = 191/320 (59%), Gaps = 7/320 (2%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL NLGNTCF+N+ LQC T+T PL L S +H R C A FC++C +++H+ +
Sbjct: 120 VGAGLSNLGNTCFLNSALQCLTYTPPLTNYLLSREHGRTC--AHGSFCMMCTMQNHMIQT 177
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
A+SG + P ++ +L IS + +QEDAHEFL+ +D ++ CL+ TK + +Q
Sbjct: 178 FANSGNAIKPLSIIRDLKKISHNLRFGRQEDAHEFLRYTIDAMQKACLNGYTKLDR-QTQ 236
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C C + SDTY+P +D++LE+E ++ ALE F K E++
Sbjct: 237 ATTLVHQIFGGYLRSRVKCLECKTVSDTYDPYLDVTLEVERAANIVRALELFVKPEQLGG 296
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKT-DGSYVVKIDKHVEFPLELDLK 344
+ + C C+++V K+ + + +V LKRF + S KI K V +P LD++
Sbjct: 297 -DNAYRCSMCRKKVLASKRFTIHRASNVLTISLKRFGSCSSSGGRKITKDVGYPEFLDIR 355
Query: 345 PYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFV 404
P+ S + + Y LYA++ H G S GHYF Y+++S W+R+ND V + V
Sbjct: 356 PFMSEPKGDPIT--YGLYAVLVHSGYSCNAGHYFCYVKASNGQWYRMNDHEVHPSNIKVV 413
Query: 405 LSQDAYILFYAKQGTEWVSS 424
L+Q AY+LFY + G+ SS
Sbjct: 414 LNQQAYVLFYLRLGSPRKSS 433
>gi|330802246|ref|XP_003289130.1| hypothetical protein DICPUDRAFT_15497 [Dictyostelium purpureum]
gi|325080797|gb|EGC34337.1| hypothetical protein DICPUDRAFT_15497 [Dictyostelium purpureum]
Length = 810
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 113/319 (35%), Positives = 194/319 (60%), Gaps = 9/319 (2%)
Query: 104 TGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIE 163
T +GAGL N+GNTCF+N++LQC T++ L + S +H + C + FC+ C+L +HI
Sbjct: 178 TKIGAGLNNIGNTCFMNSVLQCLTYSPTLANYMISREHSKNC--TNKSFCIFCSLEEHII 235
Query: 164 LSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLS 223
S ++G+ ++P+++ N+ ++ F+ +QED+HEF++ +++ L+ CL SK S+S
Sbjct: 236 ASHKATGRSITPKEIAANIRKVAPTFRIGRQEDSHEFIRFVIESLQKVCL-SKFPKGSIS 294
Query: 224 SQGD--NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLE 281
+ ++ +FGG L S+++C C S+T++P +DL ++I SL L++F K E
Sbjct: 295 HRDSMTTVIGSIFGGYLRSQVKCSVCQYESNTFDPFMDLCVDINQADSLTKGLQNFVKSE 354
Query: 282 KIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLEL 341
I D ++ C KCK+ V K+L + P + +KRF GSY K++KH++F L
Sbjct: 355 -ILDGSNRYKCSKCKKLVKAAKRLQIHISPPILTVQIKRFSFLGSYGGKVNKHIQFEQTL 413
Query: 342 DLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEE 401
+L PY + + + Y LYA++ H+G S GHY+ Y++ + W+ ++DS V++V
Sbjct: 414 NLSPYMTQANDHSI---YDLYAVLVHLGGSTNSGHYYCYVKGTNGIWYNMDDSMVSQVSL 470
Query: 402 EFVLSQDAYILFYAKQGTE 420
+ VL AY+LFY+K+ TE
Sbjct: 471 QTVLGSKAYMLFYSKRDTE 489
>gi|34784440|gb|AAH57470.1| Usp36 protein [Danio rerio]
Length = 758
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 120/311 (38%), Positives = 185/311 (59%), Gaps = 8/311 (2%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL NLGNTCF+N+ +QC T+T PL L S +H R C + GFC+IC +++HI +
Sbjct: 120 VGAGLHNLGNTCFLNSTVQCLTYTPPLANYLLSKEHSRSCHQS--GFCMICVMQNHIIQA 177
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
A++ + P + +L I+ F+ QEDAHEFL+ +D ++ CL+ K + +Q
Sbjct: 178 FANTANAIKPVSFIRDLKKIARHFRFGSQEDAHEFLRYTIDAMQKACLNGYPKLDR-QTQ 236
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C C S SDTY+P +D++LEI ++ ALE F K + +
Sbjct: 237 ATTLVHQIFGGYLRSRVKCSICKSVSDTYDPYLDIALEIRQAANIVRALELFVKPDVLSG 296
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E + C KCK++V K+ + + +V LKRF KI K V +P L+++P
Sbjct: 297 -ENAYMCAKCKKKVPATKRFTVHRTSNVLTLSLKRFANFSG--GKITKDVGYPEFLNIRP 353
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
Y S Q+S + Y LYA++ H G S GHY+ Y+++S W+++NDS V + VL
Sbjct: 354 YMS--QSSGDPVMYGLYAVLVHPGYSCHAGHYYCYVKASNGQWYQMNDSMVHSSNIKVVL 411
Query: 406 SQDAYILFYAK 416
+Q AY+LFY +
Sbjct: 412 NQQAYVLFYLR 422
>gi|351698096|gb|EHB01015.1| Ubiquitin carboxyl-terminal hydrolase 36 [Heterocephalus glaber]
Length = 1107
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 120/311 (38%), Positives = 184/311 (59%), Gaps = 8/311 (2%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL NLGNTCF+NA +QC T+T PL L S +H R C + FC++C +++HI +
Sbjct: 122 VGAGLHNLGNTCFLNATVQCLTYTPPLANYLLSREHSRSCHQGS--FCMLCVMQNHIVQA 179
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
A+SG + P + +L I+ F+ QEDAHEFL+ +D ++ CL K + +Q
Sbjct: 180 FANSGNAIKPISFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLSGYAKLDR-QTQ 238
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C C S SDTY+P +D++LEI ++ ALE F K + +
Sbjct: 239 ATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIRQAANIVRALELFVKPDVLSG 298
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E + C KCK++V K+ + + +V LKRF KI K V +P L+++P
Sbjct: 299 -ENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGG--KITKDVGYPEFLNIRP 355
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
Y S Q++ + Y LYA++ H G S GHY+ Y+++S W+++NDS V + VL
Sbjct: 356 YMS--QSNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVL 413
Query: 406 SQDAYILFYAK 416
+Q AY+LFY +
Sbjct: 414 NQQAYVLFYLR 424
>gi|410902504|ref|XP_003964734.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like [Takifugu
rubripes]
Length = 1050
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 120/309 (38%), Positives = 183/309 (59%), Gaps = 8/309 (2%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL NLGNTCF+N+ +QC T+T PL L S +H R C GFC+IC +++HI +
Sbjct: 120 VGAGLHNLGNTCFLNSTVQCLTYTPPLANYLLSKEHSRTCH--QSGFCMICVMQNHIIQA 177
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
A++G + P + +L I+ F+ QEDAHEFL+ +D ++ CL K + +Q
Sbjct: 178 FANTGNAIKPVSFIRDLKKIARHFRFGSQEDAHEFLRYTIDAMQKACLSGYPKLDR-QTQ 236
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C C S SDTY+P +D+++EI ++ ALE F K + +
Sbjct: 237 ATTLVHQIFGGYLRSRVKCSICKSVSDTYDPYLDIAVEIRQAANIVRALELFVKPDVLSG 296
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E + C KCK++V K+ + + +V LKRF KI K V +P L+++P
Sbjct: 297 -ENAYMCAKCKKKVPATKRFTVHRTSNVLTVSLKRFANFSGG--KITKDVGYPEFLNIRP 353
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
Y S Q+S + Y LYA++ H G S GHY+ Y+++S W+++NDS V + VL
Sbjct: 354 YMS--QSSGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNIKVVL 411
Query: 406 SQDAYILFY 414
+Q AY+LFY
Sbjct: 412 NQQAYVLFY 420
>gi|47219080|emb|CAG00219.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1113
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 120/309 (38%), Positives = 183/309 (59%), Gaps = 8/309 (2%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL NLGNTCF+N+ +QC T+T PL L S +H R C GFC+IC +++HI +
Sbjct: 121 VGAGLHNLGNTCFLNSTVQCLTYTPPLANYLLSKEHSRTCH--QSGFCMICVMQNHIIQA 178
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
A++G + P + +L I+ F+ QEDAHEFL+ +D ++ CL K + +Q
Sbjct: 179 FANTGNAIKPVSFIRDLKKIARHFRFGSQEDAHEFLRYTIDAMQKACLSGYPKLDR-QTQ 237
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C C S SDTY+P +D+++EI ++ ALE F K + +
Sbjct: 238 ATTLVHQIFGGYLRSRVKCSICKSVSDTYDPYLDIAVEIRQAANIVRALELFVKPDVLSG 297
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E + C KCK++V K+ + + +V LKRF KI K V +P L+++P
Sbjct: 298 -ENAYMCAKCKKKVPATKRFTVHRTSNVLTVSLKRFANFSGG--KITKDVGYPEFLNIRP 354
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
Y S Q+S + Y LYA++ H G S GHY+ Y+++S W+++NDS V + VL
Sbjct: 355 YMS--QSSGEPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNIKVVL 412
Query: 406 SQDAYILFY 414
+Q AY+LFY
Sbjct: 413 NQQAYVLFY 421
>gi|354473286|ref|XP_003498867.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Cricetulus
griseus]
gi|344241778|gb|EGV97881.1| Ubiquitin carboxyl-terminal hydrolase 36 [Cricetulus griseus]
Length = 1104
Score = 236 bits (601), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 119/311 (38%), Positives = 185/311 (59%), Gaps = 8/311 (2%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL NLGNTCF+N+ +QC T+T PL L S +H R C + FC++C +++H+ +
Sbjct: 120 VGAGLHNLGNTCFLNSTIQCLTYTPPLANYLLSKEHARSCHQGS--FCMLCVMQNHMVQA 177
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
A+SG + P + +L I+ F+ QEDAHEFL+ +D ++ CL+ K + +Q
Sbjct: 178 FANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDR-QTQ 236
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C C S SDTY+P +D++LEI ++ ALE F K + +
Sbjct: 237 ATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDIALEIRQAANIVRALELFVKPDVLSG 296
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E + C KCK++V K+ + + +V LKRF KI K V +P L+++P
Sbjct: 297 -ENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGG--KITKDVGYPEFLNIRP 353
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
Y S Q+S + Y LYA++ H G S GHY+ Y+++S W+++NDS V + VL
Sbjct: 354 YMS--QSSGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVL 411
Query: 406 SQDAYILFYAK 416
+Q AY+LFY +
Sbjct: 412 NQQAYVLFYLR 422
>gi|68533556|gb|AAH98528.1| Usp36 protein [Danio rerio]
Length = 914
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 120/311 (38%), Positives = 185/311 (59%), Gaps = 8/311 (2%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL NLGNTCF+N+ +QC T+T PL L S +H R C + GFC+IC +++HI +
Sbjct: 120 VGAGLHNLGNTCFLNSTVQCLTYTPPLANYLLSKEHSRSCHQS--GFCMICVMQNHIIQA 177
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
A++ + P + +L I+ F+ QEDAHEFL+ +D ++ CL+ K + +Q
Sbjct: 178 FANTANAIKPVSFIRDLKKIARHFRFGSQEDAHEFLRYTIDAMQKACLNGYPKLDR-QTQ 236
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C C S SDTY+P +D++LEI ++ ALE F K + +
Sbjct: 237 ATTLVHQIFGGYLRSRVKCSICKSVSDTYDPYLDIALEIRQAANIVRALELFVKPDVLSG 296
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E + C KCK++V K+ + + +V LKRF KI K V +P L+++P
Sbjct: 297 -ENAYMCAKCKKKVPATKRFTVHRTSNVLTLSLKRFANFSGG--KITKDVGYPEFLNIRP 353
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
Y S Q+S + Y LYA++ H G S GHY+ Y+++S W+++NDS V + VL
Sbjct: 354 YMS--QSSGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSMVHSSNIKVVL 411
Query: 406 SQDAYILFYAK 416
+Q AY+LFY +
Sbjct: 412 NQQAYVLFYLR 422
>gi|189517356|ref|XP_688241.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Danio rerio]
Length = 1104
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 120/311 (38%), Positives = 185/311 (59%), Gaps = 8/311 (2%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL NLGNTCF+N+ +QC T+T PL L S +H R C + GFC+IC +++HI +
Sbjct: 120 VGAGLHNLGNTCFLNSTVQCLTYTPPLANYLLSKEHSRSCHQS--GFCMICVMQNHIIQA 177
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
A++ + P + +L I+ F+ QEDAHEFL+ +D ++ CL+ K + +Q
Sbjct: 178 FANTANAIKPVSFIRDLKKIARHFRFGSQEDAHEFLRYTIDAMQKACLNGYPKLDR-QTQ 236
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C C S SDTY+P +D++LEI ++ ALE F K + +
Sbjct: 237 ATTLVHQIFGGYLRSRVKCSICKSVSDTYDPYLDIALEIRQAANIVRALELFVKPDVLSG 296
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E + C KCK++V K+ + + +V LKRF KI K V +P L+++P
Sbjct: 297 -ENAYMCAKCKKKVPATKRFTVHRTSNVLTLSLKRFANFSGG--KITKDVGYPEFLNIRP 353
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
Y S Q+S + Y LYA++ H G S GHY+ Y+++S W+++NDS V + VL
Sbjct: 354 YMS--QSSGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSMVHSSNIKVVL 411
Query: 406 SQDAYILFYAK 416
+Q AY+LFY +
Sbjct: 412 NQQAYVLFYLR 422
>gi|348558248|ref|XP_003464930.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like [Cavia
porcellus]
Length = 1102
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 119/311 (38%), Positives = 185/311 (59%), Gaps = 8/311 (2%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL NLGNTCF+NA +QC T+T PL L S +H R C + FC++C +++HI +
Sbjct: 120 VGAGLHNLGNTCFLNATVQCLTYTPPLANYLLSREHARSCHQGS--FCMLCVMQNHIVQA 177
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
A+SG + P + +L I+ F+ QEDAHEFL+ +D ++ CL+ K + +Q
Sbjct: 178 FANSGNAIKPISFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGYAKLDR-QTQ 236
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C C S SDTY+P +D++LEI ++ ALE F K + +
Sbjct: 237 ATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIRQATNIVRALELFVKPDVLSG 296
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E + C KC+++V K+ + + +V LKRF KI K V +P L+++P
Sbjct: 297 -ENAYMCAKCRKKVPASKRFTIHRTSNVLTLSLKRFANLSGG--KITKDVGYPEFLNIRP 353
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
Y S Q++ + Y LYA++ H G S GHY+ Y+++S W+++NDS V + VL
Sbjct: 354 YMS--QSNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHASNVKVVL 411
Query: 406 SQDAYILFYAK 416
+Q AY+LFY +
Sbjct: 412 NQQAYVLFYLR 422
>gi|426239211|ref|XP_004013519.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 36 [Ovis aries]
Length = 1080
Score = 234 bits (598), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 120/311 (38%), Positives = 183/311 (58%), Gaps = 8/311 (2%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL NLGNTCF+N+ +QC T+T PL L S +H R C + FC++C +++HI +
Sbjct: 120 VGAGLHNLGNTCFLNSTVQCLTYTPPLANYLLSKEHTRGCHQGS--FCMLCVMQNHIIQA 177
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
A+SG + P + +L I+ F+ QEDAHEFL+ +D ++ CL K + +Q
Sbjct: 178 FANSGNAIKPVSFIRDLRKIARHFRFGNQEDAHEFLRYTIDAMQKACLSGCAKLDR-QTQ 236
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C C S SDTY+P +D++LEI ++ ALE F K + +
Sbjct: 237 ATTLVHQIFGGYLRSRVKCSMCKSVSDTYDPYLDVALEIRQAANIVRALELFVKPDVLSG 296
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E + C KCK +V K+ + + +V LKRF KI K V +P L+++P
Sbjct: 297 -ENAYMCAKCKRKVPASKRFTIHRTSNVLTLSLKRFANFSGG--KITKDVGYPEFLNIRP 353
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
Y S Q+S + Y LYA++ H G S GHY+ Y+++S W+++NDS V + VL
Sbjct: 354 YMS--QSSGEPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSSVHASNIKVVL 411
Query: 406 SQDAYILFYAK 416
+Q AY+LFY +
Sbjct: 412 NQQAYVLFYLR 422
>gi|301616377|ref|XP_002937632.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like [Xenopus
(Silurana) tropicalis]
Length = 809
Score = 234 bits (598), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 121/311 (38%), Positives = 188/311 (60%), Gaps = 8/311 (2%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL+NLGNTCF+NA +QC T+T PL L S +H R C + GFC++C +++H+
Sbjct: 118 VGAGLQNLGNTCFLNATVQCLTYTPPLANYLLSKEHSRNCQQS--GFCMLCIMQNHLIQV 175
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
A+SG + P + +L I+ F+ QEDAHEFL+ +D ++ CL+ + + SQ
Sbjct: 176 FANSGNNVKPVSFIRDLKKIARHFRFGSQEDAHEFLRYTIDAMQKACLNGYARLDR-HSQ 234
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
++V ++FGG L S++ C C + SDTY+P +D++LEI +V ++ ALE F K + +
Sbjct: 235 ATSLVHQIFGGYLRSRVTCSVCKNVSDTYDPYLDIALEIRNVPNIVCALEMFVKSDVLSG 294
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E + C +CK++V K+ + + +V LKRF KI K V +P L+L+P
Sbjct: 295 -ENAYMCARCKKKVPACKRFSVHRESNVLTLSLKRFANSSG--GKITKEVGYPEFLNLRP 351
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
Y S Q + V + Y LYA++ H G S GHY+ Y+++S W+++NDS V + VL
Sbjct: 352 YMS--QRNGVPVMYALYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHASNIKVVL 409
Query: 406 SQDAYILFYAK 416
+Q AY+LFY +
Sbjct: 410 NQQAYVLFYLR 420
>gi|431908709|gb|ELK12301.1| Ubiquitin carboxyl-terminal hydrolase 36 [Pteropus alecto]
Length = 1007
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 120/309 (38%), Positives = 183/309 (59%), Gaps = 8/309 (2%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL NLGNTCF+N+ +QC T+T PL L S +H R C + FC++C +++HI +
Sbjct: 120 VGAGLHNLGNTCFLNSTVQCLTYTPPLAGYLLSKEHSRSCRQGS--FCMLCLMQNHIVQA 177
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
A+SG + P + +L I+ F+ QEDAHEFL+ +D ++ CL K + +Q
Sbjct: 178 FANSGNAIKPVSFIRDLKKIARHFRFGSQEDAHEFLRYTIDAMQKACLSGCAKLDR-QTQ 236
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C C S SDTY+P +D++LEI ++ ALE F K + +
Sbjct: 237 ATTLVHQIFGGYLRSRVKCSVCRSVSDTYDPYLDVALEIRQAANIVRALELFVKPDVLSG 296
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E + C KCK++V K+ + + +V LKRF KI K V +P L+++P
Sbjct: 297 -ENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGG--KITKDVGYPEFLNIRP 353
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
Y S Q+S + Y LYA++ H G S GHY+ Y+++S W+++NDS V + VL
Sbjct: 354 YMS--QSSGEPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVNSSNIKVVL 411
Query: 406 SQDAYILFY 414
+Q AY+LFY
Sbjct: 412 NQQAYVLFY 420
>gi|297487366|ref|XP_002696201.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Bos taurus]
gi|296476002|tpg|DAA18117.1| TPA: deubiquitinating enzyme 1-like [Bos taurus]
Length = 1101
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 120/311 (38%), Positives = 184/311 (59%), Gaps = 8/311 (2%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL NLGNTCF+N+ +QC T+T PL L S +H R C + FC++C +++HI +
Sbjct: 120 VGAGLHNLGNTCFLNSTVQCLTYTPPLANYLLSKEHTRGCHQGS--FCMLCVMQNHIIQA 177
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
A+SG + P + +L I+ F+ QEDAHEFL+ +D ++ CL K + +Q
Sbjct: 178 FANSGNAIKPVSFIRDLRKIARHFRFGNQEDAHEFLRYTIDAMQKACLSGCAKLDR-QTQ 236
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C C S SDTY+P +D++LEI ++ ALE F K + +
Sbjct: 237 ATTLVHQIFGGYLRSRVKCSMCKSVSDTYDPYLDVALEIRQAANIVRALELFVKPDVLSG 296
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E + C KCK++V K+ + + +V LKRF KI K V +P L+++P
Sbjct: 297 -ENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGG--KITKDVGYPEFLNIRP 353
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
Y S Q+S + Y LYA++ H G S GHY+ Y+++S W+++NDS V + VL
Sbjct: 354 YMS--QSSGEPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHASNIKVVL 411
Query: 406 SQDAYILFYAK 416
+Q AY+LFY +
Sbjct: 412 NQQAYVLFYLR 422
>gi|147832340|emb|CAN75517.1| hypothetical protein VITISV_033021 [Vitis vinifera]
Length = 918
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 131/347 (37%), Positives = 188/347 (54%), Gaps = 47/347 (13%)
Query: 72 TRPISSSYGRYNWGSSLLSRPVEKHWPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLP 131
T P +SS G+ GS + ++ I I +GAGLENLGNTC++N++LQC T+T P
Sbjct: 73 TGPAASS-GKKQDGSDHVENGLDPELSIGITFRRIGAGLENLGNTCYLNSVLQCLTYTEP 131
Query: 132 LVQALRSFDHPRPCDGATEGFCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQR 191
L L+S H C IS F+
Sbjct: 132 LAAYLQSGKHQNSC---------------------------------------ISRNFRN 152
Query: 192 YQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCS 251
+QEDAHE++ LL+ + CCL S ES S+ ++V ++FGG L S+++C C CS
Sbjct: 153 ARQEDAHEYMVHLLETMHKCCLPSGVPSESPSAYEKSLVHKIFGGLLRSQVKCMQCSYCS 212
Query: 252 DTYEPLIDLSLEIEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVP 311
+ ++P +DLSLEI SL AL FT E+++ E ++ C++CK++V KQL + K P
Sbjct: 213 NKFDPFLDLSLEIFKADSLHKALVHFTATEQLDGGERQYQCQRCKQKVKALKQLTVHKAP 272
Query: 312 SVAAFHLKRFKTDGSY--VVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMG 369
V HLKRF G++ KIDK V F +DLKP+ SG + LKY LY ++ H G
Sbjct: 273 YVLTIHLKRF---GAHDPGQKIDKKVHFGPTMDLKPFVSGSYEEN--LKYTLYGVLVHAG 327
Query: 370 SSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAK 416
S GHY+ ++R+S W+ L+D+RV +V E VL Q AY+LFY +
Sbjct: 328 WSTHSGHYYCFVRTSTGMWYSLDDNRVVQVSERTVLDQKAYMLFYVR 374
>gi|440892473|gb|ELR45652.1| Ubiquitin carboxyl-terminal hydrolase 36 [Bos grunniens mutus]
Length = 1098
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 120/311 (38%), Positives = 184/311 (59%), Gaps = 8/311 (2%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL NLGNTCF+N+ +QC T+T PL L S +H R C + FC++C +++HI +
Sbjct: 118 VGAGLHNLGNTCFLNSTVQCLTYTPPLANYLLSKEHTRGCHQGS--FCMLCVMQNHIIQA 175
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
A+SG + P + +L I+ F+ QEDAHEFL+ +D ++ CL K + +Q
Sbjct: 176 FANSGNAIKPVSFIRDLRKIARHFRFGNQEDAHEFLRYTIDAMQKACLSGCAKLDR-QTQ 234
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C C S SDTY+P +D++LEI ++ ALE F K + +
Sbjct: 235 ATTLVHQIFGGYLRSRVKCSMCKSVSDTYDPYLDVALEIRQAANIVRALELFVKPDVLSG 294
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E + C KCK++V K+ + + +V LKRF KI K V +P L+++P
Sbjct: 295 -ENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGG--KITKDVGYPEFLNIRP 351
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
Y S Q+S + Y LYA++ H G S GHY+ Y+++S W+++NDS V + VL
Sbjct: 352 YMS--QSSGEPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHASNIKVVL 409
Query: 406 SQDAYILFYAK 416
+Q AY+LFY +
Sbjct: 410 NQQAYVLFYLR 420
>gi|449275065|gb|EMC84050.1| Ubiquitin carboxyl-terminal hydrolase 36, partial [Columba livia]
Length = 349
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 118/311 (37%), Positives = 184/311 (59%), Gaps = 8/311 (2%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL NLGNTCF+NA LQC T+T PL L S +H R C GFC++C +++H+ +
Sbjct: 47 VGAGLLNLGNTCFLNATLQCLTYTPPLANYLLSKEHSRTCH--QSGFCMMCVMQNHVTQA 104
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
A+SG + P V NL I+ + +QEDAHEFL+ +D ++ CL + + +Q
Sbjct: 105 FANSGNAIKPVSFVRNLKRIAPHIRFGRQEDAHEFLRFTIDAMQKACLRDHARSDR-QTQ 163
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
++ ++FGG L S+++C C SDT++P +D++LEI ++ ALE F + + +
Sbjct: 164 ATTLIHQIFGGYLQSRVKCSVCRGVSDTFDPCLDVALEITQAANIVRALELFVRPDLLGG 223
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
+ C +CK++VS K+ + + P+V LKRF G KI K V +P L+++P
Sbjct: 224 ANA-YMCARCKKKVSATKRFTIHRAPNVLTLALKRFA--GFTGGKITKDVGYPELLNIRP 280
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
Y S Q S + Y LYA++ H G S GHY+ Y+++S W+++ND+ V + VL
Sbjct: 281 YMS--QTSGDPVMYGLYAVLVHSGYSSHAGHYYCYVKASNGQWYQMNDNVVRPSNVKVVL 338
Query: 406 SQDAYILFYAK 416
+Q AY+LFY +
Sbjct: 339 NQQAYVLFYVR 349
>gi|311266703|ref|XP_003131212.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Sus scrofa]
Length = 1140
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 119/309 (38%), Positives = 183/309 (59%), Gaps = 8/309 (2%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL NLGNTCF+N+ +QC T+T PL L S +H R C + FC++C +++HI +
Sbjct: 116 VGAGLHNLGNTCFLNSTVQCLTYTPPLANYLLSREHTRGCHQGS--FCMLCVMQNHIVQA 173
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
A+SG + P + +L I+ F+ QEDAHEFL+ +D ++ CL K + +Q
Sbjct: 174 FANSGNAIKPVSFIRDLRKIARHFRFGNQEDAHEFLRYTIDAMQKACLSGCAKLDR-QTQ 232
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C C S SDTY+P +D++LEI ++ ALE F K + +
Sbjct: 233 ATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIRQAANIVRALELFVKPDVLSG 292
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E + C KCK++V K+ + + +V LKRF KI K V +P L+++P
Sbjct: 293 -ENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGG--KITKEVGYPEFLNIRP 349
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
Y S Q++ + Y LYA++ H G S GHY+ Y+++S W+++NDS V + VL
Sbjct: 350 YMS--QSNGEPVLYGLYAVLVHSGYSCHAGHYYCYVKASSGQWYQMNDSLVHASNIKVVL 407
Query: 406 SQDAYILFY 414
+Q AY+LFY
Sbjct: 408 NQQAYVLFY 416
>gi|301766030|ref|XP_002918424.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like
[Ailuropoda melanoleuca]
Length = 1116
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 118/309 (38%), Positives = 184/309 (59%), Gaps = 8/309 (2%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL NLGNTCF+N+ +QC T+T PL L S +H R C + FC++C +++H+ +
Sbjct: 120 VGAGLHNLGNTCFLNSTIQCLTYTPPLANYLLSKEHTRNCHQGS--FCMLCLMQNHMVQA 177
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
A+SG + P + +L I+ F+ QEDAHEFL+ +D ++ CL+ K + +Q
Sbjct: 178 FANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDR-QTQ 236
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C C S SDTY+P +D++LEI ++ ALE F K + +
Sbjct: 237 ATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIRQAANIVRALELFVKPDVLSG 296
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E + C KCK++V K+ + + +V LKRF KI K V +P L+++P
Sbjct: 297 -ENAYMCAKCKKKVPASKRFTIHRASNVLTLSLKRFANFSGG--KITKDVGYPEFLNIRP 353
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
Y S Q++ + Y LYA++ H G S GHY+ Y+++S W+++NDS V + VL
Sbjct: 354 YMS--QSNGEPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNIKVVL 411
Query: 406 SQDAYILFY 414
+Q AY+LFY
Sbjct: 412 NQQAYVLFY 420
>gi|281342803|gb|EFB18387.1| hypothetical protein PANDA_006891 [Ailuropoda melanoleuca]
Length = 1117
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 118/309 (38%), Positives = 184/309 (59%), Gaps = 8/309 (2%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL NLGNTCF+N+ +QC T+T PL L S +H R C + FC++C +++H+ +
Sbjct: 120 VGAGLHNLGNTCFLNSTIQCLTYTPPLANYLLSKEHTRNCHQGS--FCMLCLMQNHMVQA 177
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
A+SG + P + +L I+ F+ QEDAHEFL+ +D ++ CL+ K + +Q
Sbjct: 178 FANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDR-QTQ 236
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C C S SDTY+P +D++LEI ++ ALE F K + +
Sbjct: 237 ATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIRQAANIVRALELFVKPDVLSG 296
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E + C KCK++V K+ + + +V LKRF KI K V +P L+++P
Sbjct: 297 -ENAYMCAKCKKKVPASKRFTIHRASNVLTLSLKRFANFSGG--KITKDVGYPEFLNIRP 353
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
Y S Q++ + Y LYA++ H G S GHY+ Y+++S W+++NDS V + VL
Sbjct: 354 YMS--QSNGEPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNIKVVL 411
Query: 406 SQDAYILFY 414
+Q AY+LFY
Sbjct: 412 NQQAYVLFY 420
>gi|345804557|ref|XP_540463.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Canis lupus
familiaris]
Length = 1116
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 118/311 (37%), Positives = 185/311 (59%), Gaps = 8/311 (2%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL NLGNTCF+N+ +QC T+T PL L S +H R C + FC++C +++H+ +
Sbjct: 120 VGAGLHNLGNTCFLNSTIQCLTYTPPLANYLLSKEHTRNCHQGS--FCMLCVMQNHMVQA 177
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
A+SG + P + +L I+ F+ QEDAHEFL+ +D ++ CL+ K + +Q
Sbjct: 178 FANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDR-QTQ 236
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C C S SDTY+P +D++LEI ++ ALE F K + +
Sbjct: 237 ATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIRQAANIVRALELFVKPDVLSG 296
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E + C KCK++V K+ + + +V LKRF KI K V +P L+++P
Sbjct: 297 -ENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGG--KITKDVGYPEFLNIRP 353
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
Y S Q++ + Y LYA++ H G S GHY+ Y+++S W+++NDS V + VL
Sbjct: 354 YMS--QSNGEPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNIKVVL 411
Query: 406 SQDAYILFYAK 416
+Q AY+LFY +
Sbjct: 412 NQQAYLLFYLR 422
>gi|363739509|ref|XP_414742.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Gallus gallus]
Length = 1323
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 125/314 (39%), Positives = 185/314 (58%), Gaps = 12/314 (3%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VG GL NLGNTCFIN+ LQC T+T PL + S +H + C+ +GFC++C + HI
Sbjct: 104 VGVGLFNLGNTCFINSALQCLTYTPPLANYMLSLEHTQSCN--YQGFCMMCTMETHINRV 161
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
L + + P +V L I F+ QEDAHEFL+ +D ++ CL T + SSQ
Sbjct: 162 LCCAHDAIKPAFVVHELKRIGKHFRFGAQEDAHEFLRFTVDAMQQACLHGCTILDR-SSQ 220
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
I+ ++FGG L S+++C NC + SDTYE +D+ L+I+ V S+ ALE F K E++ D
Sbjct: 221 ATTIIHQIFGGFLRSRVKCLNCKAVSDTYEAFLDIPLDIKTVSSVTKALEQFVKPEQL-D 279
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK--TDGSYVVKIDKHVEFPLELDL 343
E + C KCK+ V K+ + + +V LKRF T G KI+K V++P LDL
Sbjct: 280 GENCYKCSKCKKMVPASKRFTIHRSSNVLTISLKRFANFTGG----KINKEVKYPEYLDL 335
Query: 344 KPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
+ Y S Q+ L Y LYA++ H G + GHYF +I+++ W+++ND+ V + +
Sbjct: 336 RAYMS--QSIGEPLIYALYAVLVHSGVNSHAGHYFCFIKAADGLWYQMNDASVVQSNIKT 393
Query: 404 VLSQDAYILFYAKQ 417
VL Q AY+LFY ++
Sbjct: 394 VLGQQAYLLFYIRR 407
>gi|392568498|gb|EIW61672.1| cysteine proteinase [Trametes versicolor FP-101664 SS1]
Length = 664
Score = 232 bits (592), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 119/331 (35%), Positives = 177/331 (53%), Gaps = 11/331 (3%)
Query: 87 SLLSRPVEKHWPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCD 146
+LL PVE WP +G GL N+GNTCF+N+ LQC HT PL+ L PC
Sbjct: 95 TLLDIPVETAWPSG---ATIGCGLNNIGNTCFLNSALQCLLHTPPLLHVLLKHSKGEPCR 151
Query: 147 GATEGFCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLD 206
+C ICALR + + S ++P + L I+ +R +QED+HEFL+ L+D
Sbjct: 152 APKNSYCTICALR-QVMTEIFSKSHPVTPYPITTKLQVIAKQMRRGRQEDSHEFLRYLVD 210
Query: 207 RLESCCLDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIED 266
L+ L V ++FGG L S++ C +C SDTY+ ++DLS++I
Sbjct: 211 ALQKSSLAGLPGKVDPKVAEKTWVYKIFGGLLRSRVNCLSCDYNSDTYDRMLDLSVDIAG 270
Query: 267 VGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGS 326
V +L AL F ++++ + K+ CEKCK+ V+ +K+ +D+ P V HLKRF G
Sbjct: 271 VATLKDALRKFVAVDRLRGAD-KYKCEKCKKPVNADKRFTIDEAPVVLTLHLKRFSPMGR 329
Query: 327 YVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPD 386
KI V +P L L+PY S G+ Y LYA++ H GS P GHY+++++
Sbjct: 330 ---KIPHPVSYPERLTLQPYMSDGKFGP---SYSLYAVISHAGSGPNSGHYYAHVKGGNG 383
Query: 387 TWHRLNDSRVTRVEEEFVLSQDAYILFYAKQ 417
TW+ +ND V R + AY+LFY ++
Sbjct: 384 TWYEMNDESVMRQSSAPTNMRSAYMLFYIRE 414
>gi|307103899|gb|EFN52156.1| hypothetical protein CHLNCDRAFT_139325 [Chlorella variabilis]
Length = 799
Score = 231 bits (590), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 129/313 (41%), Positives = 181/313 (57%), Gaps = 5/313 (1%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
GAGL+NLGNTCF+N++LQ HT PL + L S R +GA GF I R+ + S
Sbjct: 36 AGAGLQNLGNTCFMNSVLQLLVHTPPLAELLLSGGFGRVHNGAVNGFYPIQLARELVSRS 95
Query: 166 LASSGKV-LSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSS 224
LA + + L+P K +L IS F+ +QEDAHEFL LLD + + T S
Sbjct: 96 LAQTTRSPLAPMKFAKSLRRISRSFRLGRQEDAHEFLIALLDAMHEASIAGITPKPSPEL 155
Query: 225 QGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIE 284
+ + R+FGG + S+++C CG S+TY+P IDLSLEI S+ ALE FTK E +
Sbjct: 156 AQTSFIYRIFGGRMRSQVKCSECGYESNTYDPCIDLSLEITRASSVKRALEHFTKGE-VL 214
Query: 285 DPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLK 344
D K+ C + ++ V K++ +D P+V LKRF+ S KI K ++F LELDL
Sbjct: 215 DGGNKYKCPRQQKAVRAVKRMTVDSAPNVLMIQLKRFEFSFSG-HKISKKIDFDLELDLG 273
Query: 345 PYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFV 404
P+ S + V Y LYA++ H G S GHY++Y+R+ WH +D+ V +V E V
Sbjct: 274 PFMS--EAPLVPALYDLYAVLVHSGHSVHSGHYYAYVRAPNGIWHICDDTHVAQVAERQV 331
Query: 405 LSQDAYILFYAKQ 417
++Q AYILFY K+
Sbjct: 332 MAQKAYILFYLKR 344
>gi|9758368|dbj|BAB08869.1| unnamed protein product [Arabidopsis thaliana]
Length = 829
Score = 231 bits (589), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 124/346 (35%), Positives = 190/346 (54%), Gaps = 36/346 (10%)
Query: 71 DTRPISSSYGRYNWGSSLLSRPVEKHWPIQIKPTGVGAGLENLGNTCFINAILQCFTHTL 130
+ R +S+ + S LL E I +GAGL+NLGNTCF+N++LQC T+T
Sbjct: 70 NQRLLSAPSAKKPDSSDLLEHGFEPDLTFSITFRKIGAGLQNLGNTCFLNSVLQCLTYTE 129
Query: 131 PLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQ 190
PL L++ H + C A GFC +CA++ H+ + ++G++L+P+ LV NL IS F+
Sbjct: 130 PLAATLQTAAHQKYCHVA--GFCALCAIQKHVRTARQANGRILAPKDLVSNLRCISRNFR 187
Query: 191 RYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSC 250
+QEDAHE++ LL+ + C L S ES + ++V ++FGG L S+
Sbjct: 188 NCRQEDAHEYMINLLECMHKCSLPSGVPSESSDAYRRSLVHKIFGGSLRSQ--------- 238
Query: 251 SDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKV 310
AL FT +E +++ + CE+CK++V +KQL + K
Sbjct: 239 ---------------------RALSRFTAVELLDNGAKVYQCERCKQKVKAKKQLTVSKA 277
Query: 311 PSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGS 370
P V HLKRF+ S KID+ V+F +D+KP+ SG + LKY LY ++ H G
Sbjct: 278 PYVLTVHLKRFEAHRSE--KIDRKVDFTSAIDMKPFVSGPHEGN--LKYTLYGVLVHYGR 333
Query: 371 SPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAK 416
S GHY ++R+S W+ L+D+RV +V E+ V +Q AY+LFY +
Sbjct: 334 SSHSGHYACFVRTSSGMWYSLDDNRVVQVSEKTVFNQKAYMLFYVR 379
>gi|440896875|gb|ELR48685.1| Ubiquitin carboxyl-terminal hydrolase 17, partial [Bos grunniens
mutus]
Length = 468
Score = 231 bits (589), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 126/315 (40%), Positives = 183/315 (58%), Gaps = 14/315 (4%)
Query: 103 PTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHI 162
P GVGAGL+NLGNTC++NA LQC +HT PL + S H C + C +CA+R H+
Sbjct: 22 PWGVGAGLQNLGNTCYVNAALQCLSHTPPLASWMVSQQHATLCPARSA--CTLCAMRAHV 79
Query: 163 ELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESL 222
+L +G+V+ PRK D L + F R+QQEDAHEFL L+ ++ CL S ++
Sbjct: 80 TRALLHAGEVIRPRK--DLL----AGFHRHQQEDAHEFLMFTLNAMQQGCL-SASQPSGH 132
Query: 223 SSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEK 282
+S+ I++++FGG S++QC C SDT++P +D+SL+I S+ AL K EK
Sbjct: 133 ASEDTTIIRQIFGGTWRSQIQCLRCLGVSDTFDPYLDISLDITAAQSVEQALRELVKPEK 192
Query: 283 IEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELD 342
+ D + + C C +V K+L L V LKRF K + V +P LD
Sbjct: 193 L-DADNAYDCGVCLRKVPATKRLALHSTSQVLVLVLKRFTPVSG--AKRAQEVRYPQCLD 249
Query: 343 LKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEE 402
L+PYTS + L Y LYA++ H G S GHYF Y+R+ W++++D++VT +E
Sbjct: 250 LQPYTS--ERKAGPLGYVLYAVLVHSGWSCERGHYFCYVRAGNGQWYKMDDAKVTACDET 307
Query: 403 FVLSQDAYILFYAKQ 417
LSQ AY+LFYA++
Sbjct: 308 AALSQSAYVLFYARE 322
>gi|297468710|ref|XP_002706267.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Bos
taurus]
Length = 763
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 125/315 (39%), Positives = 183/315 (58%), Gaps = 14/315 (4%)
Query: 103 PTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHI 162
P GVGAGL+NLGNTC++NA LQC +HT PL + S H C + C +CA+R H+
Sbjct: 87 PWGVGAGLQNLGNTCYVNAALQCLSHTPPLASWMVSQQHATLCPARSA--CTLCAMRAHV 144
Query: 163 ELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESL 222
+L +G+V+ PRK D L + F R+QQEDAHEFL L+ ++ CL S ++
Sbjct: 145 TRALLHAGEVIRPRK--DLL----AGFHRHQQEDAHEFLMFTLNAMQQGCL-SASQPSGH 197
Query: 223 SSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEK 282
+S+ +++++FGG S++QC C SDT++P +D+SL+I S+ AL K EK
Sbjct: 198 ASEDTTVIRQIFGGTWRSQIQCLRCLGVSDTFDPYLDISLDITAAQSVEQALRELVKPEK 257
Query: 283 IEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELD 342
+ D + + C C +V K+L L V LKRF K + V +P LD
Sbjct: 258 L-DADNAYDCGVCLRKVPATKRLTLHSTSQVLVLVLKRFTPVSG--AKRAQEVRYPQCLD 314
Query: 343 LKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEE 402
L+PYTS + L Y LYA++ H G S GHYF Y+R+ W++++D++VT +E
Sbjct: 315 LQPYTS--ERKAGPLGYVLYAVLVHSGWSCERGHYFCYVRAGNGQWYKMDDAKVTACDET 372
Query: 403 FVLSQDAYILFYAKQ 417
LSQ AY+LFYA++
Sbjct: 373 AALSQSAYVLFYARE 387
>gi|119929781|ref|XP_874913.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Bos
taurus]
Length = 558
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 125/315 (39%), Positives = 183/315 (58%), Gaps = 14/315 (4%)
Query: 103 PTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHI 162
P GVGAGL+NLGNTC++NA LQC +HT PL + S H C + C +CA+R H+
Sbjct: 112 PWGVGAGLQNLGNTCYVNAALQCLSHTPPLASWMVSQQHATLCPARSA--CTLCAMRAHV 169
Query: 163 ELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESL 222
+L +G+V+ PRK D L + F R+QQEDAHEFL L+ ++ CL S ++
Sbjct: 170 TRALLHAGEVIRPRK--DLL----AGFHRHQQEDAHEFLMFTLNAMQQGCL-SASQPSGH 222
Query: 223 SSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEK 282
+S+ +++++FGG S++QC C SDT++P +D+SL+I S+ AL K EK
Sbjct: 223 ASEDTTVIRQIFGGTWRSQIQCLRCLGVSDTFDPYLDISLDITAAQSVEQALRELVKPEK 282
Query: 283 IEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELD 342
+ D + + C C +V K+L L V LKRF K + V +P LD
Sbjct: 283 L-DADNAYDCGVCLRKVPATKRLTLHSTSQVLVLVLKRFTPVSG--AKRAQEVRYPQCLD 339
Query: 343 LKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEE 402
L+PYTS + L Y LYA++ H G S GHYF Y+R+ W++++D++VT +E
Sbjct: 340 LQPYTS--ERKAGPLGYVLYAVLVHSGWSCERGHYFCYVRAGNGQWYKMDDAKVTACDET 397
Query: 403 FVLSQDAYILFYAKQ 417
LSQ AY+LFYA++
Sbjct: 398 AALSQSAYVLFYARE 412
>gi|426259087|ref|XP_004023133.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Ovis aries]
Length = 533
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 127/315 (40%), Positives = 183/315 (58%), Gaps = 14/315 (4%)
Query: 103 PTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHI 162
P GVGAGL+NLGNTC++NA LQC +HT PL L S H C G C +CA+R H+
Sbjct: 87 PWGVGAGLQNLGNTCYVNAALQCLSHTPPLASWLVSRQHATLCPAG--GSCTLCAMRAHV 144
Query: 163 ELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESL 222
+L +G+V+ P + D L + F R+QQEDAHEFL L ++ CL S ++
Sbjct: 145 TRALLHAGEVIRPHR--DLL----AGFHRHQQEDAHEFLMFTLSGMQQGCL-SASQPSGH 197
Query: 223 SSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEK 282
+S+ ++V+++FGG S++QC +C SDT++P +D+SL+I S+ AL K EK
Sbjct: 198 ASEDTSVVRQIFGGTWRSQIQCLHCLGVSDTFDPYLDISLDITAAQSVEQALRELVKPEK 257
Query: 283 IEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELD 342
+E E + C C +V K+L L V LKRF K + V +P LD
Sbjct: 258 LEA-ENAYDCGVCLRKVPATKRLTLHSTSQVLVLVLKRFTQLSG--AKRAQEVRYPQCLD 314
Query: 343 LKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEE 402
++PYTS + L Y LYA++ H G S GHYF Y+R+ W++++D++VT +E
Sbjct: 315 VQPYTS--ERKAGPLGYVLYAVLVHSGWSCERGHYFCYVRAGNGQWYKMDDAKVTACDET 372
Query: 403 FVLSQDAYILFYAKQ 417
LSQ AYILFYA++
Sbjct: 373 AALSQSAYILFYARE 387
>gi|196000410|ref|XP_002110073.1| hypothetical protein TRIADDRAFT_53651 [Trichoplax adhaerens]
gi|190588197|gb|EDV28239.1| hypothetical protein TRIADDRAFT_53651 [Trichoplax adhaerens]
Length = 870
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 123/315 (39%), Positives = 183/315 (58%), Gaps = 7/315 (2%)
Query: 100 QIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALR 159
+IKP +GAGL NLGNTC++N++LQC +T PL + H + C GFCV+C L+
Sbjct: 99 KIKP--IGAGLVNLGNTCYLNSVLQCLCYTPPLANYALAEQHKKDCRKI--GFCVLCELQ 154
Query: 160 DHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKD 219
+ L S+G + P +V+ L I+S Q +QEDAHEFL+ L+D ++S CL + K+
Sbjct: 155 SLMVRCLKSNGSSVKPWPIVNKLKNIASHIQFGRQEDAHEFLRYLVDGIQSSCLAAYPKN 214
Query: 220 ESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTK 279
S+ ++ R+FGG L S +QC C S Y+P++DLSL+I D+ +L + L F +
Sbjct: 215 LDQYSKDTTMIYRIFGGYLRSLVQCAQCKYKSIKYDPMLDLSLDIADLNTLSAMLRKFIE 274
Query: 280 LEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPL 339
E I +TC KCK +V K+ + + P V +KRF + K + ++F
Sbjct: 275 PE-ILSGRDMYTCSKCKVKVKAMKKFTIHRAPVVLTIPIKRFNKFSLFGGKNSRKIKFTE 333
Query: 340 ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRV 399
LDL+PY + S L Y+LY ++ H G S GHY+ Y++SS + W+ +NDS VT+
Sbjct: 334 TLDLRPYMTSKTGS--PLLYNLYGVLVHSGGSCNSGHYYCYVKSSNNQWYCMNDSHVTKS 391
Query: 400 EEEFVLSQDAYILFY 414
VL Q+AYILFY
Sbjct: 392 NINAVLLQEAYILFY 406
>gi|119924425|ref|XP_001250435.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Bos taurus]
Length = 533
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 125/315 (39%), Positives = 183/315 (58%), Gaps = 14/315 (4%)
Query: 103 PTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHI 162
P GVGAGL+NLGNTC++NA LQC +HT PL + S H C + C +CA+R H+
Sbjct: 87 PWGVGAGLQNLGNTCYVNAALQCLSHTPPLASWMVSQQHATLCPARSA--CTLCAMRAHV 144
Query: 163 ELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESL 222
+L +G+V+ PRK D L + F R+QQEDAHEFL L+ ++ CL S ++
Sbjct: 145 TRALLHAGEVIRPRK--DLL----AGFHRHQQEDAHEFLMFTLNAMQQGCL-SASQPSGH 197
Query: 223 SSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEK 282
+S+ +++++FGG S++QC C SDT++P +D+SL+I S+ AL K EK
Sbjct: 198 ASEDTTVIRQIFGGTWRSQIQCLRCLGVSDTFDPYLDISLDITAAQSVEQALRELVKPEK 257
Query: 283 IEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELD 342
+ D + + C C +V K+L L V LKRF K + V +P LD
Sbjct: 258 L-DADNAYDCGVCLRKVPATKRLTLHSTSQVLVLVLKRFTPVSG--AKRAQEVRYPQCLD 314
Query: 343 LKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEE 402
L+PYTS + L Y LYA++ H G S GHYF Y+R+ W++++D++VT +E
Sbjct: 315 LQPYTS--ERKAGPLGYVLYAVLVHSGWSCERGHYFYYVRAGNGQWYKMDDAKVTACDET 372
Query: 403 FVLSQDAYILFYAKQ 417
LSQ AY+LFYA++
Sbjct: 373 AALSQSAYVLFYARE 387
>gi|119914980|ref|XP_001256113.1| PREDICTED: ubiquitin specific peptidase 17-like 2-like [Bos taurus]
Length = 533
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 125/315 (39%), Positives = 183/315 (58%), Gaps = 14/315 (4%)
Query: 103 PTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHI 162
P GVGAGL+NLGNTC++NA LQC +HT PL + S H C + C +CA+R H+
Sbjct: 87 PWGVGAGLQNLGNTCYVNAALQCLSHTPPLASWMVSQQHATLCPARSA--CTLCAMRAHV 144
Query: 163 ELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESL 222
+L +G+V+ PRK D L + F R+QQEDAHEFL L+ ++ CL S ++
Sbjct: 145 TRALLHAGEVIRPRK--DLL----AGFHRHQQEDAHEFLMFTLNAMQQGCL-SASQPSGH 197
Query: 223 SSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEK 282
+S+ +++++FGG S++QC C SDT++P +D+SL+I S+ AL K EK
Sbjct: 198 ASEDTTVIRQIFGGTWRSQIQCLRCLGVSDTFDPYLDISLDITAAQSVEQALRELVKPEK 257
Query: 283 IEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELD 342
+ D + + C C +V K+L L V LKRF K + V +P LD
Sbjct: 258 L-DADNAYDCGVCLRKVPATKRLTLHSTSQVLVLVLKRFTPVSG--AKRAQEVRYPQCLD 314
Query: 343 LKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEE 402
L+PYTS + L Y LYA++ H G S GHYF Y+R+ W++++D++VT +E
Sbjct: 315 LQPYTS--ERKAGPLGYVLYAVLVHSGWSCERGHYFCYVRAGNGQWYKMDDAKVTACDET 372
Query: 403 FVLSQDAYILFYAKQ 417
LSQ AY+LFYA++
Sbjct: 373 AALSQSAYVLFYARE 387
>gi|427793029|gb|JAA61966.1| Putative ubiquitin carboxyl-terminal hydrolase, partial
[Rhipicephalus pulchellus]
Length = 1076
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 121/318 (38%), Positives = 186/318 (58%), Gaps = 8/318 (2%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQ-ALRSFDHPRPCDGATEGFCVICALRDHIEL 164
+GAGL N+GNTCF+N ++QC T+ PL L DH C T FC++C L+ H++
Sbjct: 166 IGAGLVNMGNTCFMNTVIQCLTYCPPLANYLLHQDDHCTKCK--TLNFCMMCELQRHMKR 223
Query: 165 SLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESL-- 222
+L SG + P + L I+ FQ QQEDAHEFL+ ++D L L + L
Sbjct: 224 ALEKSGDSIKPVYIYQRLKAIAKHFQFGQQEDAHEFLRYVIDNLWKAALANYDGGVKLDP 283
Query: 223 SSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEK 282
+S+ +V +FGG S++ C C S+TY+ +DL L+I++ SL +ALE F + E
Sbjct: 284 ASKETTVVNEIFGGYHRSQVTCMKCKEKSNTYDHFMDLILDIKNASSLETALEKFVEPEL 343
Query: 283 IEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELD 342
+++ + + C +C +V +K+ + + P+VA F LKRF + + KI KHV +P L+
Sbjct: 344 LQN-DNAYKCPRCNIKVMAQKRFTVHRAPNVATFQLKRFDANRMFGGKITKHVSYPEHLE 402
Query: 343 LKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEE 402
L+PY S V Y L A++ H+G+S GHYF Y+R+S +W+ ++DSRV +V
Sbjct: 403 LRPYMSDKHGDPV--TYRLNAVLVHLGASCNSGHYFCYVRNSNGSWYCMDDSRVHQVSMG 460
Query: 403 FVLSQDAYILFYAKQGTE 420
VL+Q AY+LFY + +E
Sbjct: 461 QVLNQQAYVLFYVRTPSE 478
>gi|119929526|ref|XP_001251337.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Bos taurus]
Length = 533
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 125/315 (39%), Positives = 183/315 (58%), Gaps = 14/315 (4%)
Query: 103 PTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHI 162
P GVGAGL+NLGNTC++NA LQC +HT PL + S H C + C +CA+R H+
Sbjct: 87 PWGVGAGLQNLGNTCYVNAALQCLSHTPPLASWMVSQQHATLCPARSA--CTLCAMRAHV 144
Query: 163 ELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESL 222
+L +G+V+ PRK D L + F R+QQEDAHEFL L+ ++ CL S ++
Sbjct: 145 TRALLHAGEVIRPRK--DLL----AGFHRHQQEDAHEFLMFTLNAMQQGCL-SASQPSGH 197
Query: 223 SSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEK 282
+S+ +++++FGG S++QC C SDT++P +D+SL+I S+ AL K EK
Sbjct: 198 ASEDTTVIRQIFGGTWRSQIQCLRCLGVSDTFDPYLDISLDITAAQSVEQALRELVKPEK 257
Query: 283 IEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELD 342
+ D + + C C +V K+L L V LKRF K + V +P LD
Sbjct: 258 L-DADNAYDCGVCLRKVPATKRLTLHSTSQVLVLVLKRFTPVSG--AKRAQEVRYPQCLD 314
Query: 343 LKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEE 402
L+PYTS + L Y LYA++ H G S GHYF Y+R+ W++++D++VT +E
Sbjct: 315 LQPYTS--ERKAGPLGYVLYAVLVHSGWSCERGHYFCYVRAGNGQWYKMDDAKVTACDET 372
Query: 403 FVLSQDAYILFYAKQ 417
LSQ AY+LFYA++
Sbjct: 373 AALSQSAYVLFYARE 387
>gi|340368667|ref|XP_003382872.1| PREDICTED: hypothetical protein LOC100636480 [Amphimedon
queenslandica]
Length = 1097
Score = 229 bits (584), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 120/312 (38%), Positives = 182/312 (58%), Gaps = 7/312 (2%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
+G+GL N+GNTCF+N++LQC ++T PLV + S H C +GFC +C H+
Sbjct: 121 IGSGLSNMGNTCFLNSVLQCLSYTPPLVNYILSGHHKNKC--THQGFCAMCEYHSHLVRV 178
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDE-SLSS 224
S+G V+ P +V NL + F+ QEDAHEFL+ +D L+ L + + S
Sbjct: 179 RKSTG-VVKPIPIVHNLRVFAKHFRNGHQEDAHEFLRYFIDSLQRISLIGHQPSKLDVFS 237
Query: 225 QGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIE 284
+ ++ ++FGG S+++C C S+TY+PL+D+SL+I+ SL AL S K + +
Sbjct: 238 KHTTVIHQIFGGYHRSQVKCLKCKRFSNTYDPLLDISLDIKGCPSLQKALFSSIKPDLL- 296
Query: 285 DPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLK 344
D E K+ C CKE +KQL + +P V LKRF+ + + KI+K V++P LD++
Sbjct: 297 DEENKYACPFCKELTRAKKQLTVHVLPKVLTIQLKRFEFNTMFGGKINKTVQYPEHLDMR 356
Query: 345 PYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFV 404
P+ S + Y LYA++ H G S GHY+ Y+R+S W+ +NDS V +V + V
Sbjct: 357 PFMSDKEGP--HEWYRLYAVLVHYGYSCHSGHYYCYVRNSNGVWYSMNDSMVNQVSKATV 414
Query: 405 LSQDAYILFYAK 416
LSQ AY+LFY K
Sbjct: 415 LSQQAYLLFYIK 426
>gi|358422719|ref|XP_001252302.4| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Bos
taurus]
Length = 759
Score = 229 bits (583), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 124/315 (39%), Positives = 184/315 (58%), Gaps = 14/315 (4%)
Query: 103 PTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHI 162
P GVGAGL+NLGNTC++NA LQC +HT PL + S H C + C +CA+R H+
Sbjct: 87 PWGVGAGLQNLGNTCYVNAALQCLSHTPPLASWMVSQQHATLCPARSA--CTLCAMRAHV 144
Query: 163 ELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESL 222
+L +G+V+ PR+ D L + F R+Q+EDAHEFL L+ ++ CL S ++
Sbjct: 145 TRALLHAGEVIRPRE--DLL----AGFHRHQKEDAHEFLMFTLNAVQQGCL-SASQPSGH 197
Query: 223 SSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEK 282
+S+ +++++FGG S++QC C S SDT++P +D+SL+I S+ AL K EK
Sbjct: 198 ASEDTTVIRQIFGGTWRSQIQCLRCLSVSDTFDPYLDISLDITAAQSVEQALRELVKPEK 257
Query: 283 IEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELD 342
+ D + + C C +V K+L L V LKRF K + V +P LD
Sbjct: 258 L-DADNAYDCGVCLRKVPATKRLTLHSTSQVLVLVLKRFTLVSG--AKRAQEVRYPQCLD 314
Query: 343 LKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEE 402
L+PYTS + L Y LYA++ H G S GHYF Y+R+ W++++D++VT +E
Sbjct: 315 LQPYTS--ERKAGPLGYVLYAVLVHSGWSCERGHYFCYVRAGNGQWYKMDDAKVTACDET 372
Query: 403 FVLSQDAYILFYAKQ 417
LSQ AY+LFYA++
Sbjct: 373 AALSQSAYVLFYARE 387
>gi|147857493|emb|CAN82847.1| hypothetical protein VITISV_000504 [Vitis vinifera]
Length = 1142
Score = 229 bits (583), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 123/341 (36%), Positives = 189/341 (55%), Gaps = 33/341 (9%)
Query: 146 DGATEGFCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLL 205
+G GFC +CA++ H+ +L S+G++L+P+ LV NL + +QEDAHE++ LL
Sbjct: 334 EGHIAGFCALCAIQKHVSRALQSTGRILAPKDLVSNL-------RNARQEDAHEYMVNLL 386
Query: 206 DRLESCCLDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE 265
+ + CCL S ES S+ ++V ++FGG L S+++C C CS+ ++P +DLSLEI
Sbjct: 387 ETMHKCCLPSGVPSESPSAYEKSLVHKIFGGLLRSQVKCMQCSYCSNKFDPFLDLSLEIF 446
Query: 266 DVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDG 325
SL AL FT E+++ E ++ C++CK++V KQL + K P V HLKRF G
Sbjct: 447 KADSLHKALMHFTATEQLDGGERQYQCQRCKQKVKALKQLTVHKAPYVLTIHLKRF---G 503
Query: 326 SY--VVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRS 383
++ KIDK V F +DLKP+ SG + LKY LY ++ H G S GHY+ ++R+
Sbjct: 504 AHDPGQKIDKKVHFGPTMDLKPFVSGSYEEN--LKYTLYGVLVHAGWSTHSGHYYCFVRT 561
Query: 384 SPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEWVSSLLEAESIGMNADISNSSPK 443
S W+ L+D+RV +V E VL Q AY+LFY + D N +PK
Sbjct: 562 STGMWYSLDDNRVVQVSERTVLDQKAYMLFYVR-------------------DRKNFTPK 602
Query: 444 SVLDNVENDYTSRSGVANAESCKANEPSASAGDSSTKFSCQ 484
+D V+ S +A + ++ S++FS +
Sbjct: 603 KSIDVVQKQNLVASAIAKKTYSSESLSKEASAPKSSRFSSE 643
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 72 TRPISSSYGRYNWGSSLLSRPVEKHWPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLP 131
T P +SS G+ GS + ++ I I +GAGLENLGNTCF+N++LQC T+T P
Sbjct: 72 TGPAASS-GKKQDGSDHVENGLDPELSIGITVRRIGAGLENLGNTCFLNSVLQCLTYTEP 130
Query: 132 LVQALRSFDH 141
L L+S H
Sbjct: 131 LAAYLQSGKH 140
>gi|38014646|gb|AAH60390.1| Usp36 protein [Xenopus laevis]
Length = 715
Score = 229 bits (583), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 120/311 (38%), Positives = 184/311 (59%), Gaps = 8/311 (2%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL+NLGNTCF+NA +QC T+T PL L S +H C + GFC++C +++H+
Sbjct: 118 VGAGLQNLGNTCFLNATVQCLTYTPPLANYLLSKEHTSNCQQS--GFCMLCIMQNHLIQV 175
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
A+SG + P + L I+ F+ QEDAHEFL+ +D ++ CL+ + + SQ
Sbjct: 176 FANSGNNVKPVSFIRELKRIARHFRFGSQEDAHEFLRYTIDAMQKACLNGYARLDR-HSQ 234
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
++V ++FGG L S++ C C + SDTY+P +D++LEI +V ++ ALE F K + I
Sbjct: 235 ATSLVHQIFGGYLRSRVTCSICKNVSDTYDPYLDIALEIRNVPNIVCALEMFVKSD-ILS 293
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E + C +CK++V K+ + + +V LKRF KI K V +P L+L+P
Sbjct: 294 GENAYMCARCKKKVPASKRFSVHRDSNVLTLSLKRFANSSG--GKITKEVGYPEFLNLRP 351
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
Y S Q + + Y LYA++ H G S GHY+ Y+++S W ++NDS V + VL
Sbjct: 352 YMS--QRNGNPVMYALYAVLVHSGYSCHAGHYYCYVKASNGQWFQMNDSLVHASNIKVVL 409
Query: 406 SQDAYILFYAK 416
+Q AY+LFY +
Sbjct: 410 NQQAYVLFYLR 420
>gi|119929778|ref|XP_001255627.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Bos
taurus]
Length = 533
Score = 228 bits (581), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 124/315 (39%), Positives = 182/315 (57%), Gaps = 14/315 (4%)
Query: 103 PTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHI 162
P GVGAGL+NLGNTC++NA LQC +HT PL + S H C + C +CA+R H+
Sbjct: 87 PWGVGAGLQNLGNTCYVNAALQCLSHTPPLASWMVSQQHATLCPARSA--CTLCAMRAHV 144
Query: 163 ELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESL 222
+L +G+V+ PRK D L + F R+QQEDAHEFL L+ ++ CL S ++
Sbjct: 145 TRALLHAGEVIRPRK--DLL----AGFHRHQQEDAHEFLMFTLNAMQQGCL-SASQPSGH 197
Query: 223 SSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEK 282
+S+ +++++FGG S++QC C SDT++P +D+SL+I S+ AL K EK
Sbjct: 198 ASEDTTVIRQIFGGTWRSQIQCLRCLGVSDTFDPYLDISLDITAAQSVEQALRELVKPEK 257
Query: 283 IEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELD 342
+ D + + C C +V K+L L V LKRF K + +P LD
Sbjct: 258 L-DADNAYDCGVCLRKVPATKRLTLHSTSQVLVLVLKRFTPVSG--AKRAQEARYPQCLD 314
Query: 343 LKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEE 402
L+PYTS + L Y LYA++ H G S GHYF Y+R+ W++++D++VT +E
Sbjct: 315 LQPYTS--ERKAGPLGYVLYAVLVHSGWSCERGHYFCYVRAGNGQWYKMDDAKVTACDET 372
Query: 403 FVLSQDAYILFYAKQ 417
LSQ AY+LFYA++
Sbjct: 373 AALSQSAYVLFYARE 387
>gi|119922838|ref|XP_001254514.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Bos
taurus]
Length = 480
Score = 228 bits (581), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 124/313 (39%), Positives = 182/313 (58%), Gaps = 14/313 (4%)
Query: 105 GVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIEL 164
GVGAGL+NLGNTC++NA LQC +HT PL + S H C + C +CA+R H+
Sbjct: 36 GVGAGLQNLGNTCYVNAALQCLSHTPPLASWMVSQQHATLCPARSA--CTLCAMRAHVTR 93
Query: 165 SLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSS 224
+L +G+V+ PRK D L + F R+QQEDAHEFL L+ ++ CL S ++ +S
Sbjct: 94 ALLHAGEVIRPRK--DLL----AGFHRHQQEDAHEFLMFTLNAMQQGCL-SASQPSGHAS 146
Query: 225 QGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIE 284
+ +++++FGG S++QC C SDT++P +D+SL+I S+ AL K EK+
Sbjct: 147 EDTTVIRQIFGGTWRSQIQCLRCLGVSDTFDPYLDISLDITAAQSVEQALRELVKPEKL- 205
Query: 285 DPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLK 344
D + + C C +V K+L L V LKRF K + V +P LDL+
Sbjct: 206 DADNAYDCGVCLRKVPATKRLTLHSTSQVLVLVLKRFTLVSG--AKRAQEVRYPQCLDLQ 263
Query: 345 PYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFV 404
PYTS + L Y LYA++ H G S GHYF Y+R+ W++++D++VT +E
Sbjct: 264 PYTS--ERKAGPLGYVLYAVLVHSGWSCERGHYFCYVRAGNGQWYKMDDAKVTACDETAA 321
Query: 405 LSQDAYILFYAKQ 417
LSQ AY+LFYA++
Sbjct: 322 LSQSAYVLFYARE 334
>gi|348550615|ref|XP_003461127.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42-like [Cavia
porcellus]
Length = 391
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 126/312 (40%), Positives = 184/312 (58%), Gaps = 16/312 (5%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL+NLGNTCF+NA LQC T+T PL + S +H + C GFCV+C ++ HI +
Sbjct: 95 VGAGLQNLGNTCFVNAALQCLTYTPPLANYMLSREHTKTCHAG--GFCVMCIMQAHIIQA 152
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
L+ G + P + I+S F+ QEDAHEFLQ LD ++ CL + + +Q
Sbjct: 153 LSHPGDAIKP------IAVITSHFRFGNQEDAHEFLQYTLDAMQKACLQGSYELDR-HTQ 205
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
++ ++FGG L S+++C NC SDT++ +D++LEI+DV S+ AL F K E++E
Sbjct: 206 ATTLIYQIFGGYLRSRVKCLNCRGVSDTFDLYLDVTLEIQDVRSVNEALAQFVKPEQLEG 265
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKT-DGSYVVKIDKHVEFPLELDLK 344
E + C KC V K L + + +V LK F GS KI K V++P L+++
Sbjct: 266 -ENCYKCSKCNSMVPASKSLSIHRPSNVLTLTLKGFSNCTGS---KIAKIVKYPEHLNIR 321
Query: 345 PYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFV 404
Y S Q S ++Y LYA++ H GS GHYFSY+++S W+++ND V+ + V
Sbjct: 322 AYMS--QPSGEAMQYSLYAVLVHTGSKCCVGHYFSYVKASNGLWYQMNDFMVSPSDISSV 379
Query: 405 LSQDAYILFYAK 416
LSQ AYILFY +
Sbjct: 380 LSQQAYILFYIR 391
>gi|330822504|ref|XP_003291691.1| hypothetical protein DICPUDRAFT_156310 [Dictyostelium purpureum]
gi|325078127|gb|EGC31796.1| hypothetical protein DICPUDRAFT_156310 [Dictyostelium purpureum]
Length = 536
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 121/335 (36%), Positives = 197/335 (58%), Gaps = 10/335 (2%)
Query: 88 LLSRPVEKHWPIQIKP-TGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCD 146
++ +P E H ++ K T +GAGL N+GNTCF+N+I+QC T++ L + S +H + C
Sbjct: 93 VIFKPEELHPLMKWKSITNIGAGLYNIGNTCFMNSIIQCLTYSSTLANYMISREHSKNC- 151
Query: 147 GATEGFCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLD 206
+ FC+ C+L DHI +S +GK ++P + N+ ++ F+ +QED+HEF ++D
Sbjct: 152 -TNKSFCIFCSLEDHIIISHRETGKSITPIVIAKNIEKVAPTFRIGRQEDSHEFFCFVID 210
Query: 207 RLESCCLDSKTKDESLSSQGD--NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEI 264
L+ CL SK ++S + I+ +FGG L S+L+C C S+ ++ +DLS++I
Sbjct: 211 SLQKVCL-SKFPKGTISPRDSMTTIIGSIFGGYLRSQLKCSVCQYESNKFDEFMDLSIDI 269
Query: 265 EDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTD 324
SL L++F K E I D E + C KCK+ V EK L ++ P + +KRF
Sbjct: 270 NQADSLTKGLQNFVKPE-ILDGENGYKCAKCKKLVKAEKSLQIEISPPILTVQIKRFSFL 328
Query: 325 GSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSS 384
SY K +KH++F LDL PY + + + Y LYA++ H+G S GHY+ Y++ +
Sbjct: 329 DSYGGKDNKHIQFGQTLDLSPYMTQTNDHSI---YDLYAVLVHLGDSTNSGHYYCYVKGT 385
Query: 385 PDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGT 419
W++++DS V++V + VL AY+LFY+K+ T
Sbjct: 386 NGVWYKMDDSMVSQVSLKSVLRSKAYMLFYSKRDT 420
>gi|194680862|ref|XP_001255688.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Bos
taurus]
Length = 575
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 124/315 (39%), Positives = 184/315 (58%), Gaps = 14/315 (4%)
Query: 103 PTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHI 162
P GVGAGL+NLGNTC++NA LQC +HT PL + S H C + C +CA+R H+
Sbjct: 87 PWGVGAGLQNLGNTCYVNAALQCLSHTPPLASWMVSQQHATLCPARSA--CTLCAMRAHV 144
Query: 163 ELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESL 222
+L +G+V+ PR+ D L + F R+Q+EDAHEFL L+ ++ CL S ++
Sbjct: 145 TRALLHAGEVIRPRE--DLL----AGFHRHQKEDAHEFLMFTLNAVQQGCL-SASQPSGH 197
Query: 223 SSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEK 282
+S+ +++++FGG S++QC C S SDT++P +D+SL+I S+ AL K EK
Sbjct: 198 ASEDTTVIRQIFGGTWRSQIQCLRCLSVSDTFDPYLDISLDITAAQSVEQALRELVKPEK 257
Query: 283 IEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELD 342
+ D + + C C +V K+L L V LKRF K + V +P LD
Sbjct: 258 L-DADNAYDCGVCLRKVPATKRLTLHSTSQVLVLVLKRFTPVSG--AKRAQEVRYPQCLD 314
Query: 343 LKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEE 402
L+PYTS + L Y LYA++ H G S GHYF Y+R+ W++++D++VT +E
Sbjct: 315 LQPYTS--ERKAGPLGYVLYAVLVHSGWSCERGHYFCYVRAGNGQWYKMDDAKVTACDET 372
Query: 403 FVLSQDAYILFYAKQ 417
LSQ AY+LFYA++
Sbjct: 373 AALSQSAYVLFYARE 387
>gi|308808989|ref|XP_003081804.1| putative ubiquitin-specific protease (ISS) [Ostreococcus tauri]
gi|116060271|emb|CAL55607.1| putative ubiquitin-specific protease (ISS) [Ostreococcus tauri]
Length = 688
Score = 224 bits (572), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 123/321 (38%), Positives = 185/321 (57%), Gaps = 12/321 (3%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
GAGL NLGNTCF+N++LQC THT L S +H + + F + + +H+ +
Sbjct: 121 AGAGLANLGNTCFLNSVLQCLTHTPALAHFALSGEHKKYKTSGS--FNAMYEIGEHVARA 178
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLD-SKTKDESLSS 224
L SSG+ ++P +V N+ +S F++ +QEDAHE +CLLD + C++ K K S+
Sbjct: 179 LNSSGRTIAPTAVVKNMRALSKTFRKGRQEDAHELARCLLDAMHKKCVELVKPKISPNSA 238
Query: 225 QGD-NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKI 283
+G+ + V +VFGG L S++ C CG S+T++P +DLSLE+ S+ A + FT E I
Sbjct: 239 RGETSFVWKVFGGKLRSRVNCKTCGRNSETFDPFLDLSLEVGRAKSVLGAFKLFTHTE-I 297
Query: 284 EDPETKFTCEKCKEQVS------VEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEF 337
D + K+ CE S KQ +D+ P+V A LKRF K+ VE+
Sbjct: 298 LDGDNKYKCEGKNPGQSKPHFTKASKQFTVDQAPNVLAVQLKRFAYVPFGRGKLSHFVEY 357
Query: 338 PLELDLKPYTSG-GQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRV 396
PL LD+ PY S +NS Y LY ++ H GSS GHY+ +++++ TW ++D V
Sbjct: 358 PLVLDVTPYLSDEDRNSKNRAVYDLYGVLVHAGSSSNSGHYYCFVKTATGTWCEMDDESV 417
Query: 397 TRVEEEFVLSQDAYILFYAKQ 417
+ V E+ VL Q AY+LFYA++
Sbjct: 418 SSVSEKTVLKQQAYLLFYARR 438
>gi|393216033|gb|EJD01524.1| cysteine proteinase [Fomitiporia mediterranea MF3/22]
Length = 775
Score = 224 bits (572), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 121/343 (35%), Positives = 188/343 (54%), Gaps = 14/343 (4%)
Query: 87 SLLSRPVEKHWPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCD 146
SL +R ++ WP I G+GL N GNTCF+N+ LQC HT PL++ L H +
Sbjct: 161 SLYTRSIDLSWPAGIV---HGSGLFNQGNTCFLNSALQCLLHTPPLLRIL--MAHTKAEC 215
Query: 147 GATEGFCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLD 206
GFC+ CA+++ S G+ +P + NLN I+ ++ +QEDAHEFL+ +D
Sbjct: 216 RVKSGFCMSCAMQEVSSDSF-KKGRAFTPLPITRNLNSIAKHLRKGRQEDAHEFLRYAID 274
Query: 207 RLESCCLDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIED 266
L+ CL V ++FGG L S++ C CG SDT++ ++DLS++I +
Sbjct: 275 SLQKSCLAGYPPKIDHKLAETTWVHKIFGGQLRSRVTCQQCGYNSDTFDSILDLSIDIYN 334
Query: 267 VGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGS 326
+ L AL+ FT + ++ + K+ CEKCK V+ EKQ + + P+V HLKRF G
Sbjct: 335 ISGLKEALKKFTAKDYLKGAD-KYKCEKCKRPVNAEKQFTIHEAPAVLTVHLKRFTPMGR 393
Query: 327 YVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPD 386
K+ + + L L+P S GQ+ Y LY ++ HMG P GHYF+++R
Sbjct: 394 ---KLQHPIRYDEVLSLQPAMSEGQHGPT---YKLYGVISHMGGGPNSGHYFAHVRGGDG 447
Query: 387 TWHRLNDSRVTRVEEEFVLS-QDAYILFYAKQGTEWVSSLLEA 428
W+ +ND V RV + L+ ++AY+LFY +Q E +++ +
Sbjct: 448 QWYEMNDDSVERVHKPEPLNMKNAYMLFYIRQKGEALAAAVHG 490
>gi|358055232|dbj|GAA99001.1| hypothetical protein E5Q_05690 [Mixia osmundae IAM 14324]
Length = 601
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 127/384 (33%), Positives = 201/384 (52%), Gaps = 27/384 (7%)
Query: 89 LSRPVEKHWPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRS--FDHPRPC- 145
++R + WP +++ VG G N+GNTCF+N+ LQ HT PLV AL + R C
Sbjct: 159 IARGISLSWPRRVR---VGPGFNNVGNTCFLNSALQVLVHTAPLVSALTGTHWHSERTCY 215
Query: 146 -DGATEGFCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCL 204
G ++ FC++C ++D I S L+PR DNL I+ F+ +QED+HE L+ +
Sbjct: 216 LTGRSQ-FCLVCVMQDLINRCFGQSRSPLTPRGFTDNLKRIAKHFRLGRQEDSHELLRFV 274
Query: 205 LDRLESCCLDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEI 264
+D ++ L D + + ++ R+FGG L S++ C CG SDT+E +DLSL+I
Sbjct: 275 IDGMQQHELAGVPPDALKARRDTTMIHRIFGGKLRSRVLCNKCGHASDTFESFLDLSLDI 334
Query: 265 EDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTD 324
+ + L AL F + + + + K+ CE C V KQ + P V HLKRF
Sbjct: 335 QGLDHLRDALRRFFQPDDLRG-QNKYKCEACTRMVEATKQYTIQSPPQVLTLHLKRFTPL 393
Query: 325 GSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSS 384
G KI + + F +L+L +TS ++ L+Y LY IV H G P GHY +++R S
Sbjct: 394 GK---KIGRSIGFDEDLNLGRHTS--EDHGKGLRYRLYGIVHHAGGGPQSGHYIAHVRDS 448
Query: 385 PDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEWVSSLLEAESIGMNADISNSSPKS 444
+W+R++DS V+ E S AY+LFYA+ + ++A I+ +SP S
Sbjct: 449 VGSWNRMDDSHVSPSERMPRQSSTAYVLFYARD-------------VSLSAAINGASPSS 495
Query: 445 VLDNVENDYTSRSGVANAESCKAN 468
+V + + +++A S +
Sbjct: 496 GTPSVASHAGTSRNMSHAGSSNGH 519
>gi|339245907|ref|XP_003374587.1| ubiquitin carboxyl- hydrolase family protein [Trichinella spiralis]
gi|316972184|gb|EFV55872.1| ubiquitin carboxyl- hydrolase family protein [Trichinella spiralis]
Length = 918
Score = 222 bits (566), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 115/320 (35%), Positives = 180/320 (56%), Gaps = 11/320 (3%)
Query: 104 TGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIE 163
+ G GL+NLGNTCF+N++LQ T+T P+ L S +H R T GFC ICALR H++
Sbjct: 163 SSTGVGLQNLGNTCFMNSVLQVLTNTPPMANYLTSGEHGRQLCPGTNGFCAICALRSHVK 222
Query: 164 LSLA---SSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKD 219
A S+ SP + ++ + +QEDAHEFL+ +D +++ L + ++
Sbjct: 223 RVFAAAKSNSGSFSPTHIAQHIRCVMKSHSHGRQEDAHEFLRYFVDAMQNAALFPYRGRN 282
Query: 220 ESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTK 279
+ +Q +I+ R+FGG S++ C NC S Y+P +DLSLEI+ ++ A+ +TK
Sbjct: 283 LDIFTQETSIISRIFGGFHRSQIVCNNCQYVSVIYDPFLDLSLEIKQWNTVEHAMAHYTK 342
Query: 280 LEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPL 339
+E + + + + C +CK +VS K L + P+V HLKRF G KID+H+ +
Sbjct: 343 METLSNDDA-YNCPRCKRRVSARKILTIHSAPNVLTIHLKRFDHFG----KIDRHIGYSD 397
Query: 340 ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRV 399
++L+P+ + Q V Y LY +V H G S GHY++++ + WH ++DSRV V
Sbjct: 398 RMNLRPFMTEKQGPPVN--YRLYGVVIHNGRSTNSGHYYAFVCNPLGQWHLMDDSRVCPV 455
Query: 400 EEEFVLSQDAYILFYAKQGT 419
E L AY+LFY + T
Sbjct: 456 SSESALKASAYVLFYVRVTT 475
>gi|344297599|ref|XP_003420484.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Loxodonta
africana]
Length = 529
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 117/317 (36%), Positives = 179/317 (56%), Gaps = 16/317 (5%)
Query: 102 KPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDH 161
+ +GVGAGL N+G+TC++NA LQC T+T PL + S +H C +G+CV+CA++DH
Sbjct: 70 RSSGVGAGLRNMGDTCYVNAALQCLTYTPPLADYMLSREHAASC--GQQGYCVLCAMQDH 127
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES 221
I +L+ G V+ P + ++ R+QQEDAHEFL LD ++ CL S
Sbjct: 128 ITRALSHPGDVMEPS------HALARGLHRHQQEDAHEFLMSTLDAVQKACLRSHRHLRG 181
Query: 222 LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLE 281
LS + +++R+FGG S++QCC+C SDT++P +D++L+I+ S+ ALE +E
Sbjct: 182 LS-EDTTLIRRIFGGYWRSRIQCCHCQGVSDTFDPYLDITLDIQAAQSVNQALEQLVTVE 240
Query: 282 KIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK-TDGSYVVKIDKHVEFPLE 340
++ D E + C C+ ++ K L L P LKRF G K K V +P
Sbjct: 241 EL-DGENSYQCRICQRKMPASKTLTLHTCPEALVLVLKRFSDLSGD---KNAKQVRYPAS 296
Query: 341 LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVE 400
LD+ S + Y LYA++ H+G + GHY SY+++ W+R++D+ V+ +
Sbjct: 297 LDVSRCLS--RQDGGPAAYRLYAVLVHVGWTCHTGHYLSYVKAGNGKWYRMDDAEVSACD 354
Query: 401 EEFVLSQDAYILFYAKQ 417
VLSQ AY LFY Q
Sbjct: 355 VTCVLSQQAYALFYIHQ 371
>gi|145351758|ref|XP_001420231.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580465|gb|ABO98524.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 316
Score = 221 bits (564), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 126/320 (39%), Positives = 191/320 (59%), Gaps = 13/320 (4%)
Query: 107 GAGLENLGNTCFINAILQCFTHTLPLVQ-ALRSFDHPRPCDGATEGFCVICALRDHIELS 165
GAGL NLGNTCF+N++LQC THT L ALR +H + G + F + + +H+ +
Sbjct: 1 GAGLANLGNTCFLNSVLQCLTHTPALANFALRG-EHKKYKTGGS--FNALYEIGEHVARA 57
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDS-KTKDESLSS 224
L SSG+ ++P LV NL +S F++ +QEDAHE +CLLD + C++ K K S+
Sbjct: 58 LNSSGRTIAPTALVKNLRALSKTFRKGRQEDAHELARCLLDAMHKKCVEVVKPKISPNSA 117
Query: 225 QGD-NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKI 283
+ + + V +VFGG L S++ C CG S+T++P +DLSLE+ S+ A + FT E +
Sbjct: 118 RAETSFVWKVFGGRLRSQVNCKTCGRNSETFDPFLDLSLEVGRAKSVLGAFKMFTHTE-V 176
Query: 284 EDPETKFTCE----KCKEQVS-VEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFP 338
D + K+ CE K ++ KQ +++ P+V A LKRF K++ VE+P
Sbjct: 177 LDGDNKYRCEGKSANSKSHLTKASKQFTVNQAPNVLALQLKRFAYVPFGRGKLNHFVEYP 236
Query: 339 LELDLKPYTSG-GQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVT 397
LELD+ PYTS G S + Y LY ++ H G+S GHY+ +++ + TW ++D +T
Sbjct: 237 LELDITPYTSDEGLTSRGKAVYDLYGVLVHAGNSSNSGHYYCFVKVATGTWCLMDDDEIT 296
Query: 398 RVEEEFVLSQDAYILFYAKQ 417
V E+ VL Q AY+LFYA++
Sbjct: 297 SVSEKVVLKQQAYLLFYARR 316
>gi|409049827|gb|EKM59304.1| hypothetical protein PHACADRAFT_88204 [Phanerochaete carnosa
HHB-10118-sp]
Length = 667
Score = 221 bits (564), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 116/345 (33%), Positives = 193/345 (55%), Gaps = 19/345 (5%)
Query: 88 LLSRPVEKHWPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPR--PC 145
L S+ ++ WP Q K G+GL N GNTCF+N+ LQC HT PL++ L F H R PC
Sbjct: 109 LYSKAIDMSWPPQTK---RGSGLINTGNTCFLNSALQCLLHTPPLLRVL--FQHGRGEPC 163
Query: 146 DGATEGFCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLL 205
+ FC+ C +R+ S ++ + P + L +I+ +R +QED+HEFL+ +
Sbjct: 164 EVPKNSFCMSCNMRELAADSF-TAKHAMVPYTITRALQHIAKTMRRGRQEDSHEFLRYAV 222
Query: 206 DRLESCCLDSKTKDESLSSQGD----NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLS 261
D L+ CL + + +S + V ++FGG L S+++C +CG SDT++ ++DLS
Sbjct: 223 DALQKSCLAGQPQPQSRKVEPKLAETTWVHKIFGGRLRSRVKCLSCGHNSDTFDSMLDLS 282
Query: 262 LEIEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRF 321
++I V +L AL F ++++ + K+ CEKCK+ V+ +KQ + P V HLKRF
Sbjct: 283 IDIFGVSNLRDALRKFVAVDQLRG-QNKYKCEKCKKHVAADKQFTVHDAPMVLTIHLKRF 341
Query: 322 KTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYI 381
G KI V + + L+P S GQ+ Y L+ ++ H G P+ GHY++++
Sbjct: 342 SPMGR---KIPHLVGYDERISLQPVMSEGQHGPT---YTLFGVISHAGGGPSSGHYYAHV 395
Query: 382 RSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEWVSSLL 426
+ + WH +ND V+R + ++AYILFY ++ + + +++
Sbjct: 396 KDAAGQWHEMNDDTVSRQSGAPLGMKNAYILFYIREKGQALEAVV 440
>gi|222623836|gb|EEE57968.1| hypothetical protein OsJ_08707 [Oryza sativa Japonica Group]
Length = 1142
Score = 221 bits (563), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 122/333 (36%), Positives = 184/333 (55%), Gaps = 49/333 (14%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
+GAGL+N GNTC++N++LQC T+T P V L+S +H C T GFC +CAL+ H+ +
Sbjct: 83 IGAGLQNFGNTCYLNSVLQCLTYTEPFVAYLQSGEHMSSCR--TIGFCALCALQRHVNSA 140
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
L S+GK+L P +V NL IS F+ +QEDAHE + LL+ + CCL S S S+
Sbjct: 141 LQSTGKILRPVHIVRNLRCISRSFRISRQEDAHELMVSLLESMHKCCLPSGVPSGSPSAY 200
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
++V R+FGG L S+++C C CS+ ++P +DLSLEI + +L AL+ FT E ++
Sbjct: 201 EKSLVHRIFGGLLRSQVRCTTCSHCSNKFDPFLDLSLEIANAATLVKALQHFTAEELLDG 260
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E ++ CE C+++V +K+ M++K PSV HLKRF + + KIDK V+F L+LKP
Sbjct: 261 GEKQYNCEHCRQKVVAKKRFMIEKAPSVLTIHLKRF-SPFNPRHKIDKKVQFQPTLNLKP 319
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
Y S + V +V E VL
Sbjct: 320 YVS--------------------------------------------NPEVYQVREADVL 335
Query: 406 SQDAYILFYAKQGTEWVSSLLEAESIGMNADIS 438
Q AY+LFY + T SS++ +++ +N ++
Sbjct: 336 RQKAYMLFYVRDRTR--SSVMYSDNCTVNLSVN 366
>gi|344297595|ref|XP_003420482.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Loxodonta
africana]
gi|344297601|ref|XP_003420485.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Loxodonta
africana]
Length = 529
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 117/317 (36%), Positives = 178/317 (56%), Gaps = 16/317 (5%)
Query: 102 KPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDH 161
+ +GVGAGL N+G+TC++NA LQC T+T PL + S +H C +G+CV+CA++DH
Sbjct: 70 RSSGVGAGLRNMGDTCYVNAALQCLTYTPPLADYMLSREHAASC--GQQGYCVLCAMQDH 127
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES 221
I +L+ G V+ P + ++ R+QQEDAHEFL LD ++ CL S
Sbjct: 128 ITRALSHPGDVMEPS------HALARGLHRHQQEDAHEFLMSTLDAVQKACLRSHRHLRG 181
Query: 222 LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLE 281
LS + +++R+FGG S++QCC+C SDT++P +D++L+I+ S+ ALE E
Sbjct: 182 LS-EDTTLIRRIFGGYWRSRIQCCHCQGVSDTFDPYLDITLDIQAAQSVNQALEQLVTAE 240
Query: 282 KIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK-TDGSYVVKIDKHVEFPLE 340
++ D E + C C+ ++ K L L P LKRF G K K V +P
Sbjct: 241 EL-DGENSYQCRICQRKMPASKTLTLHTCPEALVLVLKRFSDLSGD---KNAKQVRYPAS 296
Query: 341 LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVE 400
LD+ S + Y LYA++ H+G + GHY SY+++ W+R++D+ V+ +
Sbjct: 297 LDVSRCLS--RQDGGPAAYRLYAVLVHVGWTCHTGHYLSYVKAGNGKWYRMDDAEVSACD 354
Query: 401 EEFVLSQDAYILFYAKQ 417
VLSQ AY LFY Q
Sbjct: 355 VTCVLSQQAYALFYIHQ 371
>gi|301789131|ref|XP_002929987.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Ailuropoda melanoleuca]
Length = 531
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 127/334 (38%), Positives = 187/334 (55%), Gaps = 16/334 (4%)
Query: 102 KPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDH 161
+P+ VGAGL+NLGNTC++NA+LQC T+T PL ++ S H + C T FC++CAL+ H
Sbjct: 74 RPSVVGAGLQNLGNTCYVNAVLQCLTYTPPLASSMLSQQHQQTCGKQT--FCMLCALQAH 131
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES 221
+ +L G V+ P L + + F +QQEDAHEFL L ++ CL + K
Sbjct: 132 MTRALCHPGDVIRP------LPRLLAAFHTHQQEDAHEFLMFTLGAMQQACL-PEDKPSD 184
Query: 222 LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLE 281
S+ +++++FGG S++ C +C S T +P +D+SL+IE S+ ALE K E
Sbjct: 185 PQSEDATLIRQIFGGYWRSQIHCLHCQGISSTMDPYLDISLDIEAAQSVSQALEQLVKPE 244
Query: 282 KIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLEL 341
K+ D E + C C +V K L L V LKRF K+ K V +P L
Sbjct: 245 KL-DGENAYHCNTCLGKVPASKMLTLHTPSKVLILVLKRFSDFTGN--KMAKDVHYPEHL 301
Query: 342 DLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEE 401
D++PY + L Y LYA++ H G S GHYF ++++ W++++DS+VT +
Sbjct: 302 DMQPYLC--EQRAGPLVYVLYAVLVHAGWSCHSGHYFCFVKAGNGQWYKMDDSKVTARDA 359
Query: 402 EFVLSQDAYILFYAKQGTEWVSSLLEAESIGMNA 435
LSQ AY+LFY Q TEW L+ +ES+G A
Sbjct: 360 TCALSQHAYVLFYI-QKTEWERELV-SESLGGEA 391
>gi|194676314|ref|XP_580726.4| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Bos taurus]
Length = 1106
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 116/315 (36%), Positives = 177/315 (56%), Gaps = 11/315 (3%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL NLGNTCF+N+ +QC T+T PL L S +H R C + FC++C +++HI +
Sbjct: 120 VGAGLHNLGNTCFLNSTVQCLTYTPPLANYLLSKEHTRGCHQGS--FCMLCVMQNHIIQA 177
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESL--- 222
A+SG + P + +L I+ F+ QEDAHEFL+ +
Sbjct: 178 FANSGNAIKPVSFIRDLRKIARHFRFGNQEDAHEFLRYTIXXXXXXXXXXXXXXXXXKLD 237
Query: 223 -SSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLE 281
+Q +V ++FGG L S+++C C S SDTY+P +D++LEI ++ ALE F K +
Sbjct: 238 RQTQATTLVHQIFGGYLRSRVKCSMCKSVSDTYDPYLDVALEIRQAANIVRALELFVKPD 297
Query: 282 KIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLEL 341
+ E + C KCK++V K+ + + +V LKRF KI K V +P L
Sbjct: 298 VLSG-ENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGG--KITKDVGYPEFL 354
Query: 342 DLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEE 401
+++PY S Q+S + Y LYA++ H G S GHY+ Y+++S W+++NDS V
Sbjct: 355 NIRPYMS--QSSGEPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHASNI 412
Query: 402 EFVLSQDAYILFYAK 416
+ VL+Q AY+LFY +
Sbjct: 413 KVVLNQQAYVLFYLR 427
>gi|328868712|gb|EGG17090.1| peptidase C19 family protein [Dictyostelium fasciculatum]
Length = 857
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 119/319 (37%), Positives = 190/319 (59%), Gaps = 20/319 (6%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
+G GLENLGNTCF+NA+LQC T+T PL + S +H + C T+GFC+ C+L HI S
Sbjct: 284 IGPGLENLGNTCFMNAVLQCLTYTPPLYNYMVSHEHTKTCK--TQGFCIFCSLERHIVRS 341
Query: 166 LASSG--KVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLD-----SKTK 218
SG + ++P+++ NL + F+ +QED+HEF++ +L+ + CL S T
Sbjct: 342 HEPSGVGRAITPKEIAINLKKFAPGFRLGRQEDSHEFIRFILEGCQKVCLSKYAKGSVTP 401
Query: 219 DESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFT 278
+S+++ ++ +FGG L S+++C C S+T++P +DLS++I S+ A++ F
Sbjct: 402 RDSMTT----VIGSIFGGYLQSQVKCTQCSYESNTFDPFMDLSVDIHTSDSITKAMQQFV 457
Query: 279 KLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFP 338
K E + D K+ C KCK+ V K++ + PS+ LKRF +GS K ++ +++
Sbjct: 458 KAEYL-DGANKYKCCKCKKLVRASKRMTVHVAPSILTIQLKRFNYNGS---KSNRQIQYE 513
Query: 339 LELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTR 398
LDL PY S NS + Y LY ++ H G S GHY+ Y++ S + WH +ND+ V+
Sbjct: 514 STLDLSPYMS---NSTKDAVYDLYGVLVHSGGSTNSGHYYCYVKGSTNLWHNMNDNFVSS 570
Query: 399 VEEEFVLSQDAYILFYAKQ 417
V + L Q AYILFY+++
Sbjct: 571 VNQPTALGQRAYILFYSRR 589
>gi|344297597|ref|XP_003420483.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Loxodonta africana]
Length = 529
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 117/317 (36%), Positives = 177/317 (55%), Gaps = 16/317 (5%)
Query: 102 KPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDH 161
+ +GVGAGL N+G+TC+ NA LQC T+T PL + S +H C +G+CV+CA++DH
Sbjct: 70 RSSGVGAGLRNMGDTCYGNAALQCLTYTPPLADYMLSREHAASC--GQQGYCVLCAMQDH 127
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES 221
I +L+ G V+ P + ++ R+QQEDAHEFL LD ++ CL S
Sbjct: 128 ITRALSHPGDVMEPS------HALARGLHRHQQEDAHEFLMSALDAVQKACLRSHRHLRG 181
Query: 222 LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLE 281
LS + +++R+FGG S++QCC+C SDT++P +D++L+I+ S+ ALE E
Sbjct: 182 LS-EDTTLIRRIFGGYWRSRIQCCHCQGVSDTFDPYLDITLDIQAAQSVNQALEQLVTAE 240
Query: 282 KIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK-TDGSYVVKIDKHVEFPLE 340
++ D E + C C+ ++ K L L P LKRF G K K V +P
Sbjct: 241 EL-DGENSYQCRICQRKMPASKTLTLHTCPEALVLVLKRFSDLSGD---KNAKQVRYPAS 296
Query: 341 LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVE 400
LD+ S + Y LYA++ H+G + GHY SY+++ W+R++D+ V+ +
Sbjct: 297 LDVSRCLS--RQDGGPAAYRLYAVLVHVGWTCHTGHYLSYVKAGNGKWYRMDDAEVSACD 354
Query: 401 EEFVLSQDAYILFYAKQ 417
VLSQ AY LFY Q
Sbjct: 355 VTCVLSQQAYALFYIHQ 371
>gi|320165971|gb|EFW42870.1| DUB1 [Capsaspora owczarzaki ATCC 30864]
Length = 495
Score = 219 bits (557), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 113/294 (38%), Positives = 175/294 (59%), Gaps = 9/294 (3%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
+G+GL N+GNTCF+N++LQC T+T PL S H + C C+ C L HI +
Sbjct: 203 IGSGLSNMGNTCFLNSVLQCLTYTPPLASYALSGAHSQACR--LPEICMCCELEQHIRRA 260
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSS- 224
L G + +P+ ++ L I SF + QEDAHEFL+CL++ ++ L S ++ ++
Sbjct: 261 LVHRGNI-APKPIIRQLRKIGSF-RLGHQEDAHEFLRCLMESVQQSILKSFGGEKRIAHR 318
Query: 225 -QGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKI 283
Q +V ++ GG S++ C NC + SDTYE +DLSL+I + S+ AL +T +E++
Sbjct: 319 VQETTLVHQMLGGYSNSRVHCTNCKANSDTYEAFLDLSLDIGNCASVADALAKYTVIERL 378
Query: 284 EDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDL 343
E + + CEKCK +V+ KQ + + P+V + HLKRF S+ KI++ + F ELDL
Sbjct: 379 E--KNAYNCEKCKRKVTATKQTSIHRAPNVLSLHLKRFDFLRSHNAKINRPIRFDEELDL 436
Query: 344 KPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVT 397
P+ S G L+Y LYA++ H G S GHY+ Y+R+S + W+ +NDS V+
Sbjct: 437 SPFMSKGLPQQ-NLRYRLYAVLVHAGHSCHSGHYYCYVRNSDNQWYEMNDSHVS 489
>gi|149742816|ref|XP_001494472.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Equus
caballus]
Length = 535
Score = 218 bits (555), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 137/391 (35%), Positives = 210/391 (53%), Gaps = 28/391 (7%)
Query: 92 PVEKHWPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEG 151
P +K +P VGAGL+N+GNTC++NA LQC T+T PL + S H + C +
Sbjct: 65 PAKKRLLSWKRPYVVGAGLQNMGNTCYVNAALQCLTYTPPLASYMLSQQHSKTCQ--NQR 122
Query: 152 FCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESC 211
FC +CA++ HI +L G V+ P L + + F R +QEDAHEFL LD ++
Sbjct: 123 FCTLCAMQVHITRALYHPGDVIQP------LPELVTGFHRRRQEDAHEFLMFTLDAMQQA 176
Query: 212 CLDSKTKDESLSSQGDN-IVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSL 270
CL ++ + + DN +V+++FGG S++QC +C SDT++P +D++L+I+ S+
Sbjct: 177 CL---SEYKQVDGHSDNTLVRQIFGGYWRSQIQCLHCHGVSDTFDPYLDVTLDIKAALSV 233
Query: 271 GSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKT-DGSYVV 329
ALE K EK+ D E + C C ++V K L L V LKRF GS
Sbjct: 234 NQALEQLVKPEKL-DGENSYHCSMCLKKVPASKTLTLHTSSKVLMLLLKRFSNFTGS--- 289
Query: 330 KIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWH 389
K+ K V++P LD++ Y S Q + L Y LYA++ H G S GHYF YI++ W+
Sbjct: 290 KMPKDVQYPEYLDMQQYMS--QQNSGPLLYVLYAVLVHAGWSCHNGHYFCYIKAGNGQWY 347
Query: 390 RLNDSRVTRVEEEFVLSQDAYILFYAKQGTEWVSSLLEAESIGMNADISNSSPKSVLDNV 449
+++D++VT + LSQ AY+LFY ++ S LE +S + D P+S++ +
Sbjct: 348 KMDDAKVTACDVTSALSQCAYVLFYIQK------SELERDSGSVFID---GKPRSLVADH 398
Query: 450 ENDYTSRSGVANAESCKANEPSASAGDSSTK 480
++ S + E GD+S K
Sbjct: 399 PTMVAAKWEPERDSSVRVPESEKHMGDTSVK 429
>gi|403413958|emb|CCM00658.1| predicted protein [Fibroporia radiculosa]
Length = 1268
Score = 218 bits (555), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 116/342 (33%), Positives = 181/342 (52%), Gaps = 11/342 (3%)
Query: 97 WPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVIC 156
WP T VG+GL N GNTCF+N+ LQC HT PL+ L + PC +C+ C
Sbjct: 687 WPSG---TTVGSGLYNTGNTCFLNSALQCLLHTPPLLHVLIAHSKVDPCQVRKGAYCMAC 743
Query: 157 ALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSK 216
LR + + SP ++ N++ I+ +R +QED+HEFL+ +D L+ CL
Sbjct: 744 GLRS-VMFDSHQKHRQFSPSQITSNMHVIAKHMRRGRQEDSHEFLRYAIDALQKACLAGY 802
Query: 217 TKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALES 276
V ++FGG L S++ C +CG SDT++ ++DLS++I L AL
Sbjct: 803 PPKLDPKLAETTWVHKIFGGRLRSRVTCLDCGHNSDTFDSVLDLSIDILGSSGLKEALRK 862
Query: 277 FTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVE 336
FT ++ ++ + K+ CEKCK+ V+ +KQ + P V HLKRF G KI + V+
Sbjct: 863 FTAVDHLKGAD-KYKCEKCKKAVTADKQFTVHDAPLVLTIHLKRFSPIGG---KIGQPVK 918
Query: 337 FPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRV 396
+ L L+ S GQ+ Y LYA++ H G P GHY+++++ S W+ +ND V
Sbjct: 919 YDERLSLQSVMSSGQHGP---SYVLYAVISHAGGGPNSGHYYAHVKGSNGQWYEMNDDSV 975
Query: 397 TRVEEEFVLSQDAYILFYAKQGTEWVSSLLEAESIGMNADIS 438
TR ++AYILFY + + + + + A + +N D +
Sbjct: 976 TRHPGAPTGMKNAYILFYIRDKGQALEAAVNAPAKILNRDTT 1017
>gi|348552570|ref|XP_003462100.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Cavia
porcellus]
Length = 491
Score = 218 bits (555), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 127/336 (37%), Positives = 186/336 (55%), Gaps = 32/336 (9%)
Query: 103 PTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHI 162
P GVGAGL NLGNTC++NA LQC T+T PL + + C G + C+ CA+R HI
Sbjct: 49 PYGVGAGLRNLGNTCYVNATLQCLTYTPPLANHMLALGLRLSCPG--KRICMWCAIRCHI 106
Query: 163 ELSLASSGKVLSP-RKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES 221
+L G+V+ P R L+ + F R QEDAHEFL ++D ++
Sbjct: 107 TQALRHPGRVIQPSRALLAD-------FHRENQEDAHEFLMFIVDAMQKV---------D 150
Query: 222 LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLE 281
L S+ ++V+ +FGG S+++C CGS SDT++P +D+ L+I+ S+ AL + E
Sbjct: 151 LHSENRSLVREIFGGYWRSQIKCLQCGSTSDTFDPYLDIPLDIKSTRSVKQALARSVQPE 210
Query: 282 KIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK-TDGSYVVKIDKHVEFPLE 340
++ E + C C +++ K L L V LKRF G KI KHV++
Sbjct: 211 ELSG-ENAYHCSICLQKMPASKTLTLHTASKVLIILLKRFSDVTGK---KIAKHVQYSEC 266
Query: 341 LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVE 400
LD++PY S N L Y LYA++ H G + GHYFSY+R+ W+++ND++VT +
Sbjct: 267 LDMQPYMSEQNNK--PLLYTLYAVLVHAGFTSHSGHYFSYVRAGDGHWYKMNDNKVTACD 324
Query: 401 EEFVLSQDAYILFYAKQGTEWVSSLLEAESIGMNAD 436
L QDAY+LFY ++ S LE +S GM+AD
Sbjct: 325 RTSALIQDAYVLFYVQR------SNLETDSSGMSAD 354
>gi|198414888|ref|XP_002127053.1| PREDICTED: similar to ubiquitin specific protease 36 [Ciona
intestinalis]
Length = 768
Score = 218 bits (555), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 129/381 (33%), Positives = 204/381 (53%), Gaps = 21/381 (5%)
Query: 92 PVEKHWPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEG 151
P EK + K VGAGL NLGNTCF+N+ LQC T+T PL L S H C
Sbjct: 91 PPEKLELLWRKSGRVGAGLVNLGNTCFLNSALQCLTYTPPLANYLMSNQHRAQCR-VNGQ 149
Query: 152 FCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESC 211
FC++C+L+ H S + GK + P ++ NL I+ Q +QEDAHEF++ +D ++
Sbjct: 150 FCMLCSLQHHQSASFGNGGKSIRPMNILKNLRIIAKHLQFGRQEDAHEFIRYSVDAMQRS 209
Query: 212 CLDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEI--EDVGS 269
CL + ++ +V ++FGG L S+++C C + SDT++P +DLSL+I ++
Sbjct: 210 CLFGLPSKLDIHTKTTTLVYQIFGGYLRSRVKCRQCRAVSDTFDPFLDLSLDINKQESND 269
Query: 270 LGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVV 329
L LE+F K E + + + C +CK+ V K + + P+V LKRF S++
Sbjct: 270 LRKCLENFVKPELLHG-DNLYKCYQCKKSVPASKTFSIHRPPNVLTVQLKRF---SSFMG 325
Query: 330 -KIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTW 388
KI++ + +P +L+L PYTS +N Y LYA++ H G S GHY++Y +++ W
Sbjct: 326 NKINRDITYPSKLNLGPYTSSDRNEGP--IYDLYAVLVHSGFSCNSGHYYAYAKAANGQW 383
Query: 389 HRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEWVSSLLEAESIGMNADISNSSPKSVLDN 448
+ NDS V +V L+Q AY+LFY + + E + + + ++ +V+ N
Sbjct: 384 YCFNDSSVNQVSSHQALNQQAYLLFYHR--------VAETKHVKLKQKLNQREAAAVVKN 435
Query: 449 -VENDYTSRSGVANAESCKAN 468
V N + +G N K N
Sbjct: 436 HVNNRFVDFNG--NPTKIKGN 454
>gi|426355440|ref|XP_004045130.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Gorilla
gorilla gorilla]
Length = 1237
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 122/313 (38%), Positives = 178/313 (56%), Gaps = 27/313 (8%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL+NLGNTCF NA LQC T+T PL + S +H + C + C++C
Sbjct: 45 VGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCKCSV--LCLLC--------- 93
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
V+ L N I+ F+ QEDAHEFLQ +D ++ CL+ K + +Q
Sbjct: 94 ------VMIKPCLYQNFTGIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDR-HTQ 146
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C NC SDT++P +D++LEI+ S+ ALE F K E++ D
Sbjct: 147 ATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQL-D 205
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK--TDGSYVVKIDKHVEFPLELDL 343
E + C KCK+ V K+ + + +V LKRF T G KI K V++P LD+
Sbjct: 206 GENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG----KIAKDVKYPEYLDI 261
Query: 344 KPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
+PY S Q + + Y LYA++ H G + GHYF YI++S W+++NDS V+ +
Sbjct: 262 RPYMS--QPNGEPIVYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRS 319
Query: 404 VLSQDAYILFYAK 416
VLSQ AY+LFY +
Sbjct: 320 VLSQQAYVLFYIR 332
>gi|413943501|gb|AFW76150.1| putative ubiquitin carboxyl-terminal hydrolase superfamily protein
[Zea mays]
Length = 944
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 132/364 (36%), Positives = 201/364 (55%), Gaps = 17/364 (4%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
V GL N GN+CF N +LQC + T PLV L DH R C E +C +C L+ HI+ +
Sbjct: 190 VPCGLMNCGNSCFANVVLQCLSCTRPLVAYLLGKDHSRECSVRHEDWCFLCELQCHIQRA 249
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES--LS 223
+ S +P ++ +L I +QEDAHEF++ +D+++S CLD +++ LS
Sbjct: 250 -SGSLHPFAPTNILSHLPNIGGNLGVGRQEDAHEFMRFAIDKMQSACLDEYGGEKAVDLS 308
Query: 224 SQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE-DVGSLGSALESFTKLEK 282
Q I+Q +FGG L S++QC CG S+ Y+ ++DL++EI+ D SL L+ FT +E
Sbjct: 309 IQETTIIQHIFGGRLQSQVQCTTCGMVSNRYDNMMDLTVEIQGDAESLERCLDQFTAVEW 368
Query: 283 IEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELD 342
+ D + K+ C+ C + V K L + + P++ LKRF+T K++K V FP+ELD
Sbjct: 369 L-DGDNKYKCDGCNDYVKARKHLSVQQAPNILTITLKRFQT--GRFGKLNKRVTFPMELD 425
Query: 343 LKPYTSGGQNSDVELKYHLYAIVEH--MGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVE 400
L PY S SD+ Y LYA+V H M ++ GHY YI+ W++++D +V V+
Sbjct: 426 LTPYMSCTDGSDL---YDLYAVVVHLDMLNASFFGHYICYIKGYQGRWYKIDDCKVMVVD 482
Query: 401 EEFVLSQDAYILFYAKQGTEWVSSLLEAESIGMNADISNSSPKSVLDNVENDYTSRSGVA 460
EE V +Q AY+L Y+++ S L ES+ KS+L N ++
Sbjct: 483 EEEVHAQGAYMLLYSRRTARPRSLLTVDESVKQQQQC-----KSLLSNGQSHMILADTTL 537
Query: 461 NAES 464
N ES
Sbjct: 538 NCES 541
>gi|281345036|gb|EFB20620.1| hypothetical protein PANDA_020318 [Ailuropoda melanoleuca]
Length = 411
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 128/335 (38%), Positives = 189/335 (56%), Gaps = 18/335 (5%)
Query: 102 KPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDH 161
+P+ VGAGL+NLGNTC++NA+LQC T+T PL ++ S H + C T FC++CAL+ H
Sbjct: 74 RPSVVGAGLQNLGNTCYVNAVLQCLTYTPPLASSMLSQQHQQTCGKQT--FCMLCALQAH 131
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES 221
+ +L G V+ P L + + F +QQEDAHEFL L ++ CL + K
Sbjct: 132 MTRALCHPGDVIRP------LPRLLAAFHTHQQEDAHEFLMFTLGAMQQACL-PEDKPSD 184
Query: 222 LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLE 281
S+ +++++FGG S++ C +C S T +P +D+SL+IE S+ ALE K E
Sbjct: 185 PQSEDATLIRQIFGGYWRSQIHCLHCQGISSTMDPYLDISLDIEAAQSVSQALEQLVKPE 244
Query: 282 KIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK-TDGSYVVKIDKHVEFPLE 340
K+ D E + C C +V K L L V LKRF G+ K+ K V +P
Sbjct: 245 KL-DGENAYHCNTCLGKVPASKMLTLHTPSKVLILVLKRFSDFTGN---KMAKDVHYPEH 300
Query: 341 LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVE 400
LD++PY + L Y LYA++ H G S GHYF ++++ W++++DS+VT +
Sbjct: 301 LDMQPYLC--EQRAGPLVYVLYAVLVHAGWSCHSGHYFCFVKAGNGQWYKMDDSKVTARD 358
Query: 401 EEFVLSQDAYILFYAKQGTEWVSSLLEAESIGMNA 435
LSQ AY+LFY Q TEW L+ +ES+G A
Sbjct: 359 ATCALSQHAYVLFYI-QKTEWERELV-SESLGGEA 391
>gi|242096572|ref|XP_002438776.1| hypothetical protein SORBIDRAFT_10g026010 [Sorghum bicolor]
gi|241916999|gb|EER90143.1| hypothetical protein SORBIDRAFT_10g026010 [Sorghum bicolor]
Length = 979
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 121/317 (38%), Positives = 187/317 (58%), Gaps = 12/317 (3%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
V GL N GN+CF N +LQC + T PLV L DH R C E +C +C L+ HI +
Sbjct: 184 VPCGLMNCGNSCFANVVLQCLSCTRPLVSYLLGKDHSRECSMRHEDWCFLCELQCHIHRA 243
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES--LS 223
+ S +P ++ +L I +QEDAHEF++ +D+++S CLD +++ LS
Sbjct: 244 -SGSLHPFAPTNILSHLPNIGGNLGFGRQEDAHEFMRFAIDKMQSACLDEYGGEKAVDLS 302
Query: 224 SQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE-DVGSLGSALESFTKLEK 282
+Q I+Q +FGG L S++QC CG S+ Y+ ++DL++EI+ D SL L+ FT +E
Sbjct: 303 TQETTIIQHIFGGRLQSQVQCTACGMVSNRYDNMMDLTVEIQGDAESLEKCLDQFTAIEW 362
Query: 283 IEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELD 342
+ D + K+ C+ C + V K L + + P++ LKRF++ K++K V FP+ELD
Sbjct: 363 L-DGDNKYKCDGCNDYVKARKHLSVHQAPNILTITLKRFQS--GRFGKLNKRVTFPMELD 419
Query: 343 LKPYTSGGQNSDVELKYHLYAIVEH--MGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVE 400
L PYTS SD+ Y LYA+V H M ++ GHY YI+ W++++D +V V+
Sbjct: 420 LTPYTSCTDGSDL---YDLYAVVVHLDMLNASFFGHYICYIKGYQGRWYKIDDCKVMVVD 476
Query: 401 EEFVLSQDAYILFYAKQ 417
EE V +Q AY+L Y+++
Sbjct: 477 EEEVHAQGAYMLLYSRR 493
>gi|390353834|ref|XP_001179436.2| PREDICTED: uncharacterized protein LOC754104 [Strongylocentrotus
purpuratus]
Length = 1340
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 106/312 (33%), Positives = 180/312 (57%), Gaps = 5/312 (1%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VG+GL N+GNTCF+N+ LQC T+T PL L S H C + GFC++C L HI+ +
Sbjct: 132 VGSGLINMGNTCFLNSTLQCLTYTAPLANYLLSHQHKEEC--RSYGFCILCDLYTHIQRA 189
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
+ + P ++ L I+ +QEDAHEFL+ +++ ++ CL S+
Sbjct: 190 FQHPNQAIRPMNMIHKLKSIAKHMHIGRQEDAHEFLRYVIEAMQKSCLSGYDNKLDRYSK 249
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+ V ++FGG S++ C C S SDT++P +D+SL+I+ S+ AL + E + D
Sbjct: 250 ETSPVHQIFGGYYRSRVICAACQSKSDTFDPFLDISLDIKHAPSVHKALNRLIQSEML-D 308
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
+ + C++C +V +K+ + + P++ LKRF+ + + KI+K V + L+L+P
Sbjct: 309 GDNAYQCKRCNRKVLAQKRFTIHRCPNILTLCLKRFEFNRFSMGKINKEVSYSEYLNLRP 368
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
+ S + + Y LYA+++H G S GHY+ Y+R+ +W+ +NDS V++ VL
Sbjct: 369 FMS--ETKGPAVGYQLYAVLKHEGGSCNSGHYYCYVRAPNQSWYCMNDSYVSQCSLNRVL 426
Query: 406 SQDAYILFYAKQ 417
+Q+AY+LFY ++
Sbjct: 427 NQNAYVLFYIRK 438
>gi|119922836|ref|XP_001254468.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Bos taurus]
Length = 691
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 116/308 (37%), Positives = 175/308 (56%), Gaps = 14/308 (4%)
Query: 110 LENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLASS 169
L+NLGNTC++NA LQC +HT PL + S H C + C +CA+R H+ +L +
Sbjct: 108 LQNLGNTCYVNAALQCLSHTPPLASWMVSQQHATLCPARSA--CTLCAMRAHVTRALLHA 165
Query: 170 GKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDNI 229
G+V+ PRK + + F R+QQEDAHEFL L+ ++ CL S ++ +S+ +
Sbjct: 166 GEVIRPRK------DLLAGFHRHQQEDAHEFLMFTLNAMQQGCL-SASQPSGHASEDTTV 218
Query: 230 VQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIEDPETK 289
++++FGG S++QC C SDT++P +D+SL+I S+ AL K EK+ D +
Sbjct: 219 IRQIFGGTWRSQIQCLRCLGVSDTFDPYLDISLDITAAQSVEQALRELVKPEKL-DADNA 277
Query: 290 FTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPYTSG 349
+ C C +V K+L L V LKRF K + +P LDL+PYTS
Sbjct: 278 YDCGVCLRKVPATKRLTLHSTSQVLVLVLKRFTPVSG--AKRAQEARYPQCLDLQPYTS- 334
Query: 350 GQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDA 409
+ L Y LYA++ H G S GHYF Y+R+ W++++D++VT +E LSQ A
Sbjct: 335 -ERKAGPLGYVLYAVLVHSGWSCERGHYFCYVRAGNGQWYKMDDAKVTACDETAALSQSA 393
Query: 410 YILFYAKQ 417
Y+LFYA++
Sbjct: 394 YVLFYARE 401
>gi|388580255|gb|EIM20571.1| cysteine proteinase [Wallemia sebi CBS 633.66]
Length = 515
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 140/414 (33%), Positives = 215/414 (51%), Gaps = 23/414 (5%)
Query: 24 EKTLDPSWSSPETLHDHLHPSNHPLTLTDLDKDQNNDDDDDYEEIYRDTRPISSSY--GR 81
EK L+ S+P + HP++ L + + K N D +E T+ +SS G
Sbjct: 23 EKALESLLSAPIIFQEASHPASKGLGIPNGYKAINEDAKTAKKEGKSPTQNANSSAVNGT 82
Query: 82 YNWGSSLLSRPVEKH---WPIQIK-PTGV---GAGLENLGNTCFINAILQCFTHTLPLVQ 134
++L ++P K WPI P GV G GL NLGNTCF+N+ LQC HT L+
Sbjct: 83 TTTANALPAKPTAKDIYPWPIAPAFPKGVNNVGKGLRNLGNTCFLNSTLQCLLHTPSLMN 142
Query: 135 ALRSFDHPRPCDGATEGFCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQ 194
L+S H + + FC+I ALR + + + SG +P +V NL I+ +Q
Sbjct: 143 FLQS-QHAK--GRSDNKFCMIEALRTCAKTTFSGSGGSFAPAPVVRNLKAIARHMTVGRQ 199
Query: 195 EDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTY 254
EDA EFL+ +D L++ L + K N + ++FGG L S++ C N SDT+
Sbjct: 200 EDAQEFLRYAVDALQASYLSNYPKTVKEKHSESNPIHKIFGGKLRSRVLCQNSKHASDTF 259
Query: 255 EPLIDLSLEIEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVA 314
+ +DLS+ ++ ++ + +SFT L+++E K+ CE CK+ V+ KQ + + P
Sbjct: 260 DTFLDLSVNVKGCSNIQESFKSFTALDRLEG-ANKYKCENCKKPVAATKQFTVHEAPQCL 318
Query: 315 AFHLKRFKTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTC 374
HLKRF G K++ + F LD++ Y S GQ S KY LY +V H G S
Sbjct: 319 TVHLKRFSPLGQ---KLNGSLSFDENLDIQKYMSKGQQSP---KYRLYGVVSHYGGSARS 372
Query: 375 GHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEWVSSLLEA 428
GHY +++++ W+ +ND V+ + F S++AY+LFY K E SSL +A
Sbjct: 373 GHYIAHVKAPNGRWYEMNDDLVSPSKPPFG-SKNAYVLFYEK---ERSSSLKDA 422
>gi|156359561|ref|XP_001624836.1| predicted protein [Nematostella vectensis]
gi|156211638|gb|EDO32736.1| predicted protein [Nematostella vectensis]
Length = 406
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 118/373 (31%), Positives = 203/373 (54%), Gaps = 23/373 (6%)
Query: 62 DDDYEEIYRDTRPISSSYGRYNWGSSLLSR-----------------PVEKHWPIQIKPT 104
D+ YE++ + +P++S S+LL+ P++K +
Sbjct: 28 DEQYEKLKQKYKPLNSGSNYGQIKSNLLTNGKVDASDSIPSPKFVLYPIDKINTQWTRVR 87
Query: 105 GVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIEL 164
+G GL NLGNTCF+N+++Q T+T PLV L + +H R C GFC++C L+ HI
Sbjct: 88 RMGPGLSNLGNTCFLNSVVQVLTYTAPLVNYLATQEHTRECQMV--GFCMMCELQRHILR 145
Query: 165 SL-ASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLS 223
+ + + P ++ L I+ + QEDAHEFL+ ++D ++ CL + +
Sbjct: 146 TFNHQQNESIKPLCIIQRLRSIAKHLRFGHQEDAHEFLRYVIDGMQKSCLAGQPEKMDRY 205
Query: 224 SQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKI 283
S+ IV +FGG S++QC C + S+T++PL+++ ++I+ S+ A++ K E +
Sbjct: 206 SKETTIVHGIFGGYYRSQVQCLKCHNTSNTFDPLMEIMVDIKHSPSVVRAIQRMCKAE-L 264
Query: 284 EDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDL 343
D + + C +CK++V KQ+++ + P++ LKRF + K+ K + + LDL
Sbjct: 265 LDGDNLYQCPRCKKKVPAHKQVLIHRPPNILTIQLKRFDYHHMFGGKVSKEITYTEHLDL 324
Query: 344 KPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
+P+ + + LKY LY ++ H G S GHY+ Y+R S D W+ +NDS V +V
Sbjct: 325 RPFMTNPKGP--PLKYKLYGVLVHSGYSCNSGHYYCYVRGSNDCWYNMNDSMVRQVGLNT 382
Query: 404 VLSQDAYILFYAK 416
VL+Q AY+LFY++
Sbjct: 383 VLAQQAYLLFYSR 395
>gi|384252944|gb|EIE26419.1| cysteine proteinase [Coccomyxa subellipsoidea C-169]
Length = 840
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 123/315 (39%), Positives = 172/315 (54%), Gaps = 28/315 (8%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATE-GFCVICALRDHIEL 164
GAGLENLGNTCF+N++LQC THT PL + L S RP A E F + L H+
Sbjct: 38 TGAGLENLGNTCFLNSVLQCLTHTPPLAEVLLSN---RPLGSAAEWDFLRLTQL--HVMR 92
Query: 165 SLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSS 224
+L + +V+SPR + L I F+R +QEDAHE+L LLD + L S
Sbjct: 93 ALHNRSRVISPRPHANGLRRICRSFRRGRQEDAHEYLVALLDAMHEAALAGYNPKPS--- 149
Query: 225 QGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIE 284
+++CC CG S+T E +D+ L+I GSL ALE +TK E +
Sbjct: 150 ---------------REVKCCECGYESNTMESFMDICLDIGRAGSLAHALERYTKPEML- 193
Query: 285 DPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLK 344
D E K+ C K V K + +++VP+V F LKRF+ Y KI K V+F LD+
Sbjct: 194 DRENKYKCPKQGRLVRARKTITIERVPNVLVFQLKRFEYS-MYGSKIGKKVDFYTHLDMA 252
Query: 345 PYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFV 404
PY S + + ++ Y L+ ++ H G S GHYF ++R+ WHR++D +V++V E V
Sbjct: 253 PYMSN-RRAGPQM-YELFGVLVHAGHSVHSGHYFCFVRAPNGLWHRMDDVQVSQVSERVV 310
Query: 405 LSQDAYILFYAKQGT 419
L Q AYILFY + T
Sbjct: 311 LGQKAYILFYIRSAT 325
>gi|153792150|ref|NP_958804.2| ubiquitin carboxyl-terminal hydrolase 17 [Homo sapiens]
gi|187663988|sp|Q6R6M4.2|U17L2_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17;
Short=USP17; AltName: Full=Deubiquitinating enzyme
17-like protein 2; AltName: Full=Deubiquitinating
protein 3; Short=DUB-3; AltName: Full=Ubiquitin
carboxyl-terminal hydrolase 17-like protein 2; AltName:
Full=Ubiquitin thioesterase 17-like protein 2; AltName:
Full=Ubiquitin-specific-processing protease 17-like
protein 2
Length = 530
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 119/321 (37%), Positives = 185/321 (57%), Gaps = 17/321 (5%)
Query: 102 KPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDH 161
+P VGAGL+N+GNTC+ NA LQC T+T PL + S +H + C C++C ++ H
Sbjct: 74 RPAAVGAGLQNMGNTCYENASLQCLTYTPPLANYMLSREHSQTCQ--RPKCCMLCTMQAH 131
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES 221
I +L S G V+ P + +++ F R +QEDAHEFL +D ++ CL K
Sbjct: 132 ITWALHSPGHVIQPSQA------LAAGFHRGKQEDAHEFLMFTVDAMKKACLPGH-KQVD 184
Query: 222 LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLE 281
S+ ++ ++FGGC S+++C +C SDT++P +D++L+I+ S+ ALE K E
Sbjct: 185 HHSKDTTLIHQIFGGCWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVKQALEQLVKPE 244
Query: 282 KIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK-TDGSYVVKIDKHVEFPLE 340
++ + E + C C ++ K L L V LKRF G+ K+ K+V++P
Sbjct: 245 EL-NGENAYHCGLCLQRAPASKTLTLHTSAKVLILVLKRFSDVTGN---KLAKNVQYPEC 300
Query: 341 LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVE 400
LD++PY S Q + L Y LYA++ H G S GHYFSY+++ W++++D++VT
Sbjct: 301 LDMQPYMS--QQNTGPLVYVLYAVLVHAGWSCHDGHYFSYVKAQEGQWYKMDDAKVTACS 358
Query: 401 EEFVLSQDAYILFYAKQGTEW 421
VLSQ AY+LFY Q +EW
Sbjct: 359 ITSVLSQQAYVLFYI-QKSEW 378
>gi|344297603|ref|XP_003420486.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Loxodonta
africana]
Length = 621
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 116/317 (36%), Positives = 177/317 (55%), Gaps = 16/317 (5%)
Query: 102 KPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDH 161
+ +GVGAGL N+G+TC++NA LQC T+T PL + S +H C +G+CV+CA++DH
Sbjct: 70 RSSGVGAGLRNMGDTCYVNAALQCLTYTPPLADYMLSREHAASC--GQQGYCVLCAMQDH 127
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES 221
I +L+ G V+ P + ++ R+QQEDAHEFL LD ++ CL S
Sbjct: 128 ITRALSHPGDVMEPS------HALARGLHRHQQEDAHEFLMSTLDAVQKACLRSYRHLRG 181
Query: 222 LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLE 281
LS + +++R+FGG S++QC +C SDT++P +D++L+I+ S+ ALE E
Sbjct: 182 LS-EDTTLIRRIFGGYWRSRIQCRHCQGVSDTFDPYLDITLDIQAAQSVNQALEQLVTAE 240
Query: 282 KIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK-TDGSYVVKIDKHVEFPLE 340
++ D E + C C+ ++ K L L P LKRF G K K V +P
Sbjct: 241 EL-DGENSYQCRICQRKMPASKTLTLHTCPEALVLVLKRFSDLSGD---KNAKQVRYPAS 296
Query: 341 LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVE 400
LD+ S + Y LYA++ H+G + GHY SY+++ W+R++D+ V+ +
Sbjct: 297 LDVSRCLS--RQDGGPAAYRLYAVLVHVGWTCHTGHYLSYVKAGNGKWYRMDDAEVSACD 354
Query: 401 EEFVLSQDAYILFYAKQ 417
VLSQ AY LFY Q
Sbjct: 355 VTCVLSQQAYALFYIHQ 371
>gi|326524007|dbj|BAJ97014.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1026
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 147/472 (31%), Positives = 238/472 (50%), Gaps = 22/472 (4%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL N GN+CF N +LQC ++T PLV L DH R C E +C +C L+ HI+ ++ S
Sbjct: 135 GLVNCGNSCFANVVLQCLSYTRPLVAYLLEKDHTRQCTIRHEDWCFLCELQSHIQKAIDS 194
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESL--SSQG 226
+P ++ L I +QEDAHEF++ +D+++S CLD ++ + S+Q
Sbjct: 195 V-HAFAPMNILSRLRNIGGNLGFGRQEDAHEFMRFAIDKMQSACLDEYGGEKVVDHSTQE 253
Query: 227 DNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE-DVGSLGSALESFTKLEKIED 285
++Q +FGG L S++QC CG S+ YE ++DL++EI D SL L+ FT +E + D
Sbjct: 254 TTVIQHIFGGRLQSQVQCTACGMVSNRYENMMDLTVEIHGDAESLEKCLDQFTAVEWL-D 312
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
+ K+ C+ C + V K L + + P++ LKRF++ K++K V FP LDL P
Sbjct: 313 GDNKYKCDGCNDYVKARKHLTVHQAPNILTITLKRFQS--GRFGKLNKKVTFPTTLDLTP 370
Query: 346 YTSGGQNSDVELKYHLYAIVEH--MGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
Y S +D +Y LYA+V H M ++ GHY YI+ W +++D +V V+EE
Sbjct: 371 YMSTTDGTD---QYDLYAVVVHLDMLNASFFGHYICYIKHHRGCWLKIDDCKVMAVDEEE 427
Query: 404 VLSQDAYILFYAKQGTEWVSSLLEAESIGMNADISNSSPKSVLDNVENDYTSRSGVANAE 463
V +Q AY+L Y+++ V L E I + D + +
Sbjct: 428 VHAQGAYMLLYSRRTPRPVPLLAVKEPIKHEKQCKVPPLNGQNHLIPEDVPLKCESFSKP 487
Query: 464 SCKANEPSASAGDSSTKFSC--QLRSIDLEVNETRDT-VKGMSACFTLASCRNAAEHETR 520
S E S S+ DS + Q+ +DL +N RD + + ++S + E +TR
Sbjct: 488 SEDLREGSESSNDSVHRMDTVEQVSDLDLHMNIERDKLITNGNMHQPISSALHVLEEDTR 547
Query: 521 DNTPMIDDASRPLSASDFYGVFCNEKVNKLTSLEEDNCN---PGVEKVKIVD 569
D ++ + + + A + C + L + E+ C PG++ V +D
Sbjct: 548 DPGSLL-EGNNTMRADQYGNSACE---SSLVNSSEEECKEPAPGIDSVDYMD 595
>gi|119929524|ref|XP_001251224.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Bos
taurus]
Length = 490
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 118/308 (38%), Positives = 176/308 (57%), Gaps = 14/308 (4%)
Query: 110 LENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLASS 169
L+NLGNTC++NA LQC +HT PL + S H C + C +CA+R H+ +L +
Sbjct: 51 LQNLGNTCYVNAALQCLSHTPPLASWMVSQQHATLCPARSA--CTLCAMRAHVTRALLHA 108
Query: 170 GKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDNI 229
G+V+ PRK D L + F R+QQEDAHEFL L+ ++ CL S ++ +S+ +
Sbjct: 109 GEVIRPRK--DLL----AGFHRHQQEDAHEFLMFTLNAMQQGCL-SASQPSGHASEDTTV 161
Query: 230 VQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIEDPETK 289
++++FGG S++QC C SDT++P +D+SL+I S+ AL K EK+ D +
Sbjct: 162 IRQIFGGTWRSQIQCLRCLGVSDTFDPYLDISLDITAAQSVEQALRELVKPEKL-DADNA 220
Query: 290 FTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPYTSG 349
+ C C +V K+L L V LKRF K + +P LDL+PYTS
Sbjct: 221 YDCGVCLRKVPATKRLTLHSTSQVLVLVLKRFTPVSG--AKRAQEARYPQCLDLQPYTS- 277
Query: 350 GQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDA 409
+ L Y LYA++ H G S GHYF Y+R+ W++++D++VT +E LSQ A
Sbjct: 278 -ERKAGPLGYVLYAVLVHSGWSCERGHYFCYVRAGNGQWYKMDDAKVTACDETAALSQSA 336
Query: 410 YILFYAKQ 417
Y+LFYA++
Sbjct: 337 YVLFYARE 344
>gi|33333160|gb|AAQ11741.1| deubiquitinating enzyme DUB1 [Homo sapiens]
Length = 530
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 119/321 (37%), Positives = 185/321 (57%), Gaps = 17/321 (5%)
Query: 102 KPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDH 161
+P VGAGL+N+GNTC++NA LQC T+T PL + S +H + C C++C ++ H
Sbjct: 74 RPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCH--RHKGCMLCTMQAH 131
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES 221
I +L + G V+ P + +++ F R +QEDAHEFL +D ++ CL K
Sbjct: 132 ITRALHNPGHVIQPSQA------LAAGFHRGKQEDAHEFLMFTVDAMKKACLPGH-KQVD 184
Query: 222 LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLE 281
S+ ++ ++FGG S+++C +C SDT++P +D++L+I+ S+ ALE K E
Sbjct: 185 HHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPE 244
Query: 282 KIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK-TDGSYVVKIDKHVEFPLE 340
++ + E + C C ++ S K L L V LKRF G+ KI K+V++P
Sbjct: 245 EL-NGENAYHCGVCLQRASASKTLTLHTSAKVLILVLKRFSDVTGN---KIAKNVQYPEC 300
Query: 341 LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVE 400
LD++PY S Q + L Y LYA++ H G S GHYFSY+++ W++++D+ VT
Sbjct: 301 LDMQPYMS--QQNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASS 358
Query: 401 EEFVLSQDAYILFYAKQGTEW 421
VLSQ AY+LFY Q +EW
Sbjct: 359 ITSVLSQQAYVLFYI-QKSEW 378
>gi|354501314|ref|XP_003512737.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Cricetulus griseus]
gi|344238609|gb|EGV94712.1| Ubiquitin carboxyl-terminal hydrolase DUB-1 [Cricetulus griseus]
Length = 482
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 115/317 (36%), Positives = 184/317 (58%), Gaps = 16/317 (5%)
Query: 102 KPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDH 161
+P VGAGLEN GN+C++NA+LQC THT PLV + S +H + C +G C+ICA+ H
Sbjct: 105 RPHDVGAGLENTGNSCYMNAVLQCLTHTPPLVNYMLSREHSQNC--CHQGDCMICAMEAH 162
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES 221
+ SL SG V+ P + +++ F +++QEDAHEFL L+ + + CL +K
Sbjct: 163 VTRSLLYSGDVIQPSE------KLTAAFHKHRQEDAHEFLLFTLNAMHTSCLPG-SKLLG 215
Query: 222 LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLE 281
+S+ +++ +FGG S+++C +C +D EP +D++L+I+ S+ ALE+ E
Sbjct: 216 CTSEQSSLIHEIFGGSWKSQIKCLHCNETTDLLEPFLDITLDIQTAQSVNQALENLVMEE 275
Query: 282 KIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRF-KTDGSYVVKIDKHVEFPLE 340
++ E + C+ C+++ K L + P V L RF + G K D+ V +P
Sbjct: 276 QLCG-ENAYHCDNCRQKTMASKTLTVKDAPKVLLLVLNRFSEFTGD---KKDRKVSYPES 331
Query: 341 LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVE 400
D +PY S Q+ L Y LYA++ H G + GHYF Y+++ W++++DS VTR +
Sbjct: 332 FDFQPYIS--QSHRQPLFYSLYAVLVHDGVTCHSGHYFCYVKAGNGHWYKMDDSSVTRCD 389
Query: 401 EEFVLSQDAYILFYAKQ 417
VLS+ AY+LFY +Q
Sbjct: 390 VNSVLSEPAYVLFYVQQ 406
>gi|379030631|ref|NP_001243800.1| ubiquitin carboxyl-terminal hydrolase 17-like protein 3 [Homo
sapiens]
gi|187653918|sp|A6NCW0.1|U17L3_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
3; AltName: Full=Deubiquitinating enzyme 17-like protein
3; AltName: Full=Ubiquitin thioesterase 17-like protein
3; AltName: Full=Ubiquitin-specific-processing protease
17-like protein 3
Length = 530
Score = 215 bits (547), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 118/320 (36%), Positives = 181/320 (56%), Gaps = 15/320 (4%)
Query: 102 KPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDH 161
+P VGAGL+N+GNTC+ NA LQC T+TLPL + S +H + C C++C ++ H
Sbjct: 74 RPAAVGAGLQNMGNTCYENASLQCLTYTLPLANYMLSREHSQTCQ--RPKCCMLCTMQAH 131
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES 221
I +L S G V+ P + ++S F R +QED HEFL +D ++ CL K
Sbjct: 132 ITWALHSPGHVIQPSQA------LASGFHRGKQEDVHEFLMFTVDAMKKACLPGH-KQVD 184
Query: 222 LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLE 281
S+ ++ ++FGGC S+++C +C SDT++P +D++L+I+ S+ ALE K E
Sbjct: 185 HHSKDTTLIHQIFGGCWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVKQALEQLVKPE 244
Query: 282 KIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLEL 341
++ + E + C C ++ L L V LKRF K+ K+V++P L
Sbjct: 245 EL-NGENAYHCGLCLQRAPASNTLTLHTSAKVLILVLKRFSDVAGN--KLAKNVQYPECL 301
Query: 342 DLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEE 401
D++PY S Q + L Y LYA++ H G S GHYFSY+++ W++++D+ VT
Sbjct: 302 DMQPYMS--QQNTGPLVYVLYAVLVHAGWSCHDGHYFSYVKAQEGQWYKMDDAEVTVCSI 359
Query: 402 EFVLSQDAYILFYAKQGTEW 421
VLSQ AY+LFY Q +EW
Sbjct: 360 TSVLSQQAYVLFYI-QKSEW 378
>gi|114598756|ref|XP_001139436.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Pan
troglodytes]
Length = 530
Score = 214 bits (546), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 118/321 (36%), Positives = 184/321 (57%), Gaps = 17/321 (5%)
Query: 102 KPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDH 161
+P VGAGL+N+GNTC++NA LQC T+T PL + S +H + C C++C ++ H
Sbjct: 74 RPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCH--RHKGCMLCTMQAH 131
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES 221
I +L G V+ P + +++ F R +QEDAHEFL +D +E CL + E
Sbjct: 132 ITRALHIPGHVIQPSQA------LAAGFHRGKQEDAHEFLMFTVDAMEKACLPGHKQVEH 185
Query: 222 LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLE 281
S+ ++ ++FGG S+++C +C SDT++P +D++L+I+ S+ ALE K E
Sbjct: 186 -HSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPE 244
Query: 282 KIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK-TDGSYVVKIDKHVEFPLE 340
++ + E + C C ++ K L L V LKRF G+ K+ K+V++P
Sbjct: 245 EL-NGENAYHCGLCLQRAPASKTLTLHTSAKVLILVLKRFSDVTGN---KLAKNVQYPEC 300
Query: 341 LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVE 400
LD++PY S Q + L Y LYA++ H G S GHYFSY+++ W++++D+ VT
Sbjct: 301 LDMQPYMS--QQNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASS 358
Query: 401 EEFVLSQDAYILFYAKQGTEW 421
VLSQ AY+LFY Q +EW
Sbjct: 359 ITSVLSQQAYVLFYI-QKSEW 378
>gi|378925638|ref|NP_001243786.1| ubiquitin carboxyl-terminal hydrolase 17-like protein 17 [Homo
sapiens]
gi|449061957|sp|D6RBQ6.1|U17LH_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
17
Length = 530
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 118/321 (36%), Positives = 184/321 (57%), Gaps = 17/321 (5%)
Query: 102 KPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDH 161
+P VGAGL+N+GNTC++NA LQC T+T PL + S +H + C C++C ++ H
Sbjct: 74 RPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCH--RHKGCMLCTMQAH 131
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES 221
I +L + G V+ P + +++ F R +QEDAHEFL +D ++ CL K
Sbjct: 132 ITRALHNPGHVIQPSQA------LAAGFHRGKQEDAHEFLMFTVDAMKKACLPGH-KQVD 184
Query: 222 LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLE 281
S+ ++ ++FGG S+++C +C SDT++P +D++L+I+ S+ ALE K E
Sbjct: 185 HHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPE 244
Query: 282 KIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK-TDGSYVVKIDKHVEFPLE 340
++ + E + C C ++ K L L V LKRF G+ KI K+V++P
Sbjct: 245 EL-NGENAYHCGVCLQRAPASKTLTLHTSAKVLILVLKRFSDVTGN---KIAKNVQYPEC 300
Query: 341 LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVE 400
LD++PY S Q + L Y LYA++ H G S GHYFSY+++ W++++D+ VT
Sbjct: 301 LDMQPYMS--QQNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTAAS 358
Query: 401 EEFVLSQDAYILFYAKQGTEW 421
VLSQ AY+LFY Q +EW
Sbjct: 359 ITSVLSQQAYVLFYI-QKSEW 378
>gi|378925636|ref|NP_001243784.1| ubiquitin carboxyl-terminal hydrolase 17-like protein 13 [Homo
sapiens]
gi|449061955|sp|C9JLJ4.1|U17LD_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
13
Length = 530
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 118/321 (36%), Positives = 184/321 (57%), Gaps = 17/321 (5%)
Query: 102 KPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDH 161
+P VGAGL+N+GNTC++NA LQC T+T PL + S +H + C C++C ++ H
Sbjct: 74 RPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCH--RHKGCMLCTMQAH 131
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES 221
I +L + G V+ P + +++ F R +QEDAHEFL +D ++ CL K
Sbjct: 132 ITRALHNPGHVIQPSQA------LAAGFHRGKQEDAHEFLMFTVDAMKKACLPGH-KQVD 184
Query: 222 LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLE 281
S+ ++ ++FGG S+++C +C SDT++P +D++L+I+ S+ ALE K E
Sbjct: 185 HPSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPE 244
Query: 282 KIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK-TDGSYVVKIDKHVEFPLE 340
++ + E + C C ++ K L L V LKRF G+ KI K+V++P
Sbjct: 245 EL-NGENAYHCGVCLQRAPASKTLTLHTSAKVLILVLKRFSDVTGN---KIAKNVQYPEC 300
Query: 341 LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVE 400
LD++PY S Q + L Y LYA++ H G S GHYFSY+++ W++++D+ VT
Sbjct: 301 LDMQPYMS--QQNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTAAS 358
Query: 401 EEFVLSQDAYILFYAKQGTEW 421
VLSQ AY+LFY Q +EW
Sbjct: 359 ITSVLSQQAYVLFYI-QKSEW 378
>gi|125556320|gb|EAZ01926.1| hypothetical protein OsI_23952 [Oryza sativa Indica Group]
Length = 1079
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 116/314 (36%), Positives = 188/314 (59%), Gaps = 12/314 (3%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL N GN+CF N +LQC + T PL L DH R C E +C +C L+ HI+ + +
Sbjct: 215 GLLNCGNSCFANVVLQCLSCTRPLAAYLLGMDHSRECYKRHEDWCFLCELQCHIQRA-SE 273
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESL--SSQG 226
S +P+ ++ +L I +QEDAHEF++ +D+++S CLD ++++ S+Q
Sbjct: 274 SMHPFAPKNILSHLPNIGGNLGFGRQEDAHEFMRFAIDKMQSACLDEFGGEKAVDPSTQE 333
Query: 227 DNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE-DVGSLGSALESFTKLEKIED 285
++Q +FGG L S++QC CG S+ YE ++DL++EI D SL L+ FT +E + D
Sbjct: 334 TTLIQHIFGGRLQSQVQCTACGMVSNRYENMMDLTVEIHGDADSLEECLDKFTAVEWL-D 392
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
+ K+ C+ C + V +K+L + + P++ LKRF++ K++K V FP++LDL P
Sbjct: 393 GDNKYKCDGCSDYVKAQKRLTVYQAPNILTITLKRFQS--GRFGKLNKRVTFPMKLDLTP 450
Query: 346 YTSGGQNSDVELKYHLYAIVEH--MGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
Y S SD +Y LYA+V H M ++ GHY YI++ W++++D +V V+EE
Sbjct: 451 YMSSTDGSD---QYDLYAVVVHLDMLNASFFGHYICYIKNYRGRWYKIDDCKVMAVDEEE 507
Query: 404 VLSQDAYILFYAKQ 417
V +Q AY+L Y+++
Sbjct: 508 VHAQGAYMLLYSRR 521
>gi|115469288|ref|NP_001058243.1| Os06g0654000 [Oryza sativa Japonica Group]
gi|113596283|dbj|BAF20157.1| Os06g0654000, partial [Oryza sativa Japonica Group]
Length = 944
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 116/314 (36%), Positives = 188/314 (59%), Gaps = 12/314 (3%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL N GN+CF N +LQC + T PL L DH R C E +C +C L+ HI+ + +
Sbjct: 80 GLLNCGNSCFANVVLQCLSCTRPLAAYLLGMDHSRECYKRHEDWCFLCELQCHIQRA-SE 138
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESL--SSQG 226
S +P+ ++ +L I +QEDAHEF++ +D+++S CLD ++++ S+Q
Sbjct: 139 SMHPFAPKNILSHLPNIGGNLGFGRQEDAHEFMRFAIDKMQSACLDEFGGEKAVDPSTQE 198
Query: 227 DNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE-DVGSLGSALESFTKLEKIED 285
++Q +FGG L S++QC CG S+ YE ++DL++EI D SL L+ FT +E + D
Sbjct: 199 TTLIQHIFGGRLQSQVQCTACGMVSNRYENMMDLTVEIHGDADSLEECLDKFTAVEWL-D 257
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
+ K+ C+ C + V +K+L + + P++ LKRF++ K++K V FP++LDL P
Sbjct: 258 GDNKYKCDGCSDYVKAQKRLTVYQAPNILTITLKRFQS--GRFGKLNKRVTFPMKLDLTP 315
Query: 346 YTSGGQNSDVELKYHLYAIVEH--MGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
Y S SD +Y LYA+V H M ++ GHY YI++ W++++D +V V+EE
Sbjct: 316 YMSSTDGSD---QYDLYAVVVHLDMLNASFFGHYICYIKNYRGRWYKIDDCKVMAVDEEE 372
Query: 404 VLSQDAYILFYAKQ 417
V +Q AY+L Y+++
Sbjct: 373 VHAQGAYMLLYSRR 386
>gi|51535049|dbj|BAD37420.1| putative ubiquitin-specific protease 15 [Oryza sativa Japonica
Group]
gi|51535599|dbj|BAD37542.1| putative ubiquitin-specific protease 15 [Oryza sativa Japonica
Group]
Length = 1069
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 116/314 (36%), Positives = 188/314 (59%), Gaps = 12/314 (3%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL N GN+CF N +LQC + T PL L DH R C E +C +C L+ HI+ + +
Sbjct: 205 GLLNCGNSCFANVVLQCLSCTRPLAAYLLGMDHSRECYKRHEDWCFLCELQCHIQRA-SE 263
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESL--SSQG 226
S +P+ ++ +L I +QEDAHEF++ +D+++S CLD ++++ S+Q
Sbjct: 264 SMHPFAPKNILSHLPNIGGNLGFGRQEDAHEFMRFAIDKMQSACLDEFGGEKAVDPSTQE 323
Query: 227 DNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE-DVGSLGSALESFTKLEKIED 285
++Q +FGG L S++QC CG S+ YE ++DL++EI D SL L+ FT +E + D
Sbjct: 324 TTLIQHIFGGRLQSQVQCTACGMVSNRYENMMDLTVEIHGDADSLEECLDKFTAVEWL-D 382
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
+ K+ C+ C + V +K+L + + P++ LKRF++ K++K V FP++LDL P
Sbjct: 383 GDNKYKCDGCSDYVKAQKRLTVYQAPNILTITLKRFQS--GRFGKLNKRVTFPMKLDLTP 440
Query: 346 YTSGGQNSDVELKYHLYAIVEH--MGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
Y S SD +Y LYA+V H M ++ GHY YI++ W++++D +V V+EE
Sbjct: 441 YMSSTDGSD---QYDLYAVVVHLDMLNASFFGHYICYIKNYRGRWYKIDDCKVMAVDEEE 497
Query: 404 VLSQDAYILFYAKQ 417
V +Q AY+L Y+++
Sbjct: 498 VHAQGAYMLLYSRR 511
>gi|125598076|gb|EAZ37856.1| hypothetical protein OsJ_22202 [Oryza sativa Japonica Group]
Length = 995
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 116/314 (36%), Positives = 188/314 (59%), Gaps = 12/314 (3%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL N GN+CF N +LQC + T PL L DH R C E +C +C L+ HI+ + +
Sbjct: 131 GLLNCGNSCFANVVLQCLSCTRPLAAYLLGMDHSRECYKRHEDWCFLCELQCHIQRA-SE 189
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESL--SSQG 226
S +P+ ++ +L I +QEDAHEF++ +D+++S CLD ++++ S+Q
Sbjct: 190 SMHPFAPKNILSHLPNIGGNLGFGRQEDAHEFMRFAIDKMQSACLDEFGGEKAVDPSTQE 249
Query: 227 DNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE-DVGSLGSALESFTKLEKIED 285
++Q +FGG L S++QC CG S+ YE ++DL++EI D SL L+ FT +E + D
Sbjct: 250 TTLIQHIFGGRLQSQVQCTACGMVSNRYENMMDLTVEIHGDADSLEECLDKFTAVEWL-D 308
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
+ K+ C+ C + V +K+L + + P++ LKRF++ K++K V FP++LDL P
Sbjct: 309 GDNKYKCDGCSDYVKAQKRLTVYQAPNILTITLKRFQS--GRFGKLNKRVTFPMKLDLTP 366
Query: 346 YTSGGQNSDVELKYHLYAIVEH--MGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
Y S SD +Y LYA+V H M ++ GHY YI++ W++++D +V V+EE
Sbjct: 367 YMSSTDGSD---QYDLYAVVVHLDMLNASFFGHYICYIKNYRGRWYKIDDCKVMAVDEEE 423
Query: 404 VLSQDAYILFYAKQ 417
V +Q AY+L Y+++
Sbjct: 424 VHAQGAYMLLYSRR 437
>gi|379643059|ref|NP_001243823.1| ubiquitin carboxyl-terminal hydrolase 17-like protein 15 [Homo
sapiens]
Length = 559
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 119/321 (37%), Positives = 184/321 (57%), Gaps = 17/321 (5%)
Query: 102 KPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDH 161
+P VGAGL+N+GNTC++NA LQC T+T PL + S +H + C C++C ++ H
Sbjct: 74 RPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCH--RHKGCMLCTMQAH 131
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES 221
I +L + G V+ P + +++ F R +QEDAHEFL +D ++ CL K
Sbjct: 132 ITRALHNPGHVIQPSQA------LAAGFHRGKQEDAHEFLMFTVDAMKKACLPGH-KQVD 184
Query: 222 LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLE 281
S+ ++ ++FGG S+++C +C SDT++P +D++L+I+ S+ ALE K E
Sbjct: 185 HHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPE 244
Query: 282 KIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK-TDGSYVVKIDKHVEFPLE 340
++ + E + C C ++ K L L V LKRF G+ KIDK+V++P
Sbjct: 245 EL-NGENAYHCGVCLQRAPASKTLTLHTSAKVLILVLKRFSDVTGN---KIDKNVQYPEC 300
Query: 341 LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVE 400
LD+K Y S Q + L Y LYA++ H G S GHYFSY+++ W++++D+ VT
Sbjct: 301 LDMKLYMS--QTNSGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASS 358
Query: 401 EEFVLSQDAYILFYAKQGTEW 421
VLSQ AY+LFY Q +EW
Sbjct: 359 ITSVLSQQAYVLFYI-QKSEW 378
>gi|378925634|ref|NP_001243783.1| ubiquitin carboxyl-terminal hydrolase 17-like protein 11 [Homo
sapiens]
gi|449061954|sp|C9JVI0.1|U17LB_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
11
Length = 530
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 118/321 (36%), Positives = 184/321 (57%), Gaps = 17/321 (5%)
Query: 102 KPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDH 161
+P VGAGL+N+GNTC++NA LQC T+T PL + S +H + C C++C ++ H
Sbjct: 74 RPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCH--RHKGCMLCTMQAH 131
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES 221
I +L + G V+ P + +++ F R +QEDAHEFL +D ++ CL K
Sbjct: 132 ITRALHNPGHVIQPSQA------LAAGFHRGKQEDAHEFLMFTVDAMKKACLPGH-KQVD 184
Query: 222 LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLE 281
S+ ++ ++FGG S+++C +C SDT++P +D++L+I+ S+ ALE K E
Sbjct: 185 HHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPE 244
Query: 282 KIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK-TDGSYVVKIDKHVEFPLE 340
++ + E + C C ++ K L L V LKRF G+ KI K+V++P
Sbjct: 245 EL-NGENAYHCGVCLQRAPASKTLTLHTSAKVLILVLKRFSDVTGN---KIAKNVQYPEC 300
Query: 341 LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVE 400
LD++PY S Q + L Y LYA++ H G S GHYFSY+++ W++++D+ VT
Sbjct: 301 LDMQPYMS--QTNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASS 358
Query: 401 EEFVLSQDAYILFYAKQGTEW 421
VLSQ AY+LFY Q +EW
Sbjct: 359 ITSVLSQQAYVLFYI-QKSEW 378
>gi|40804411|gb|AAR91701.1| deubiquitinating enzyme 3 [Homo sapiens]
gi|162317638|gb|AAI56291.1| Deubiquitinating enzyme 3 [synthetic construct]
gi|162319434|gb|AAI57074.1| Deubiquitinating enzyme 3 [synthetic construct]
Length = 530
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 118/321 (36%), Positives = 183/321 (57%), Gaps = 17/321 (5%)
Query: 102 KPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDH 161
+P VGAGL+N+GNTC+ NA LQC T+T PL + S +H + C C++C ++ H
Sbjct: 74 RPAAVGAGLQNMGNTCYENASLQCLTYTPPLANYMLSREHSQTCQ--RPKCCMLCTMQAH 131
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES 221
I +L S G V+ P + +++ F R +QEDAHEFL +D ++ CL K
Sbjct: 132 ITWALHSPGHVIQPSQA------LAAGFHRGKQEDAHEFLMFTVDAMKKACLPGH-KQVD 184
Query: 222 LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLE 281
S+ ++ ++FGGC S+++C +C DT++P +D++L+I+ S+ ALE K E
Sbjct: 185 HHSKDTTLIHQIFGGCWRSQIKCLHCHGIPDTFDPYLDIALDIQAAQSVKQALEQLVKPE 244
Query: 282 KIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK-TDGSYVVKIDKHVEFPLE 340
++ + E + C C ++ K L L V LKRF G+ K+ K+V++P
Sbjct: 245 EL-NGENAYHCGLCLQRAPASKTLTLHTSAKVLILVLKRFSDVTGN---KLAKNVQYPEC 300
Query: 341 LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVE 400
LD++PY S Q + L Y LYA++ H G S GHYFSY+++ W++++D+ VT
Sbjct: 301 LDMQPYMS--QQNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASS 358
Query: 401 EEFVLSQDAYILFYAKQGTEW 421
VLSQ AY+LFY Q +EW
Sbjct: 359 ITSVLSQQAYVLFYI-QKSEW 378
>gi|379030599|ref|NP_001243788.1| ubiquitin carboxyl-terminal hydrolase 17-like protein 18 [Homo
sapiens]
gi|449061958|sp|D6R9N7.1|U17LI_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
18
Length = 530
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 118/321 (36%), Positives = 184/321 (57%), Gaps = 17/321 (5%)
Query: 102 KPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDH 161
+P VGAGL+N+GNTC++NA LQC T+T PL + S +H + C C++C ++ H
Sbjct: 74 RPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCH--RHKGCMLCTMQAH 131
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES 221
I +L + G V+ P + +++ F R +QEDAHEFL +D ++ CL K
Sbjct: 132 ITRALHNPGHVIQPSQA------LAAGFHRGKQEDAHEFLMFTVDAMKKACLPGH-KQVD 184
Query: 222 LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLE 281
S+ ++ ++FGG S+++C +C SDT++P +D++L+I+ S+ ALE K E
Sbjct: 185 HHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPE 244
Query: 282 KIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK-TDGSYVVKIDKHVEFPLE 340
++ + E + C C ++ K L L V LKRF G+ KI K+V++P
Sbjct: 245 EL-NGENAYHCGVCLQRAPASKTLTLHTSAKVLILVLKRFSDVTGN---KIAKNVQYPEC 300
Query: 341 LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVE 400
LD++PY S Q + L Y LYA++ H G S GHYFSY+++ W++++D+ VT
Sbjct: 301 LDMQPYMS--QTNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASS 358
Query: 401 EEFVLSQDAYILFYAKQGTEW 421
VLSQ AY+LFY Q +EW
Sbjct: 359 ITSVLSQQAYVLFYI-QKSEW 378
>gi|449061956|sp|C9J2P7.1|U17LF_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
15
Length = 530
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 119/321 (37%), Positives = 184/321 (57%), Gaps = 17/321 (5%)
Query: 102 KPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDH 161
+P VGAGL+N+GNTC++NA LQC T+T PL + S +H + C C++C ++ H
Sbjct: 74 RPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCH--RHKGCMLCTMQAH 131
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES 221
I +L + G V+ P + +++ F R +QEDAHEFL +D ++ CL K
Sbjct: 132 ITRALHNPGHVIQPSQA------LAAGFHRGKQEDAHEFLMFTVDAMKKACLPGH-KQVD 184
Query: 222 LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLE 281
S+ ++ ++FGG S+++C +C SDT++P +D++L+I+ S+ ALE K E
Sbjct: 185 HHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPE 244
Query: 282 KIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK-TDGSYVVKIDKHVEFPLE 340
++ + E + C C ++ K L L V LKRF G+ KIDK+V++P
Sbjct: 245 EL-NGENAYHCGVCLQRAPASKTLTLHTSAKVLILVLKRFSDVTGN---KIDKNVQYPEC 300
Query: 341 LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVE 400
LD+K Y S Q + L Y LYA++ H G S GHYFSY+++ W++++D+ VT
Sbjct: 301 LDMKLYMS--QTNSGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASS 358
Query: 401 EEFVLSQDAYILFYAKQGTEW 421
VLSQ AY+LFY Q +EW
Sbjct: 359 ITSVLSQQAYVLFYI-QKSEW 378
>gi|379030602|ref|NP_001243789.1| ubiquitin carboxyl-terminal hydrolase 17-like protein 19 [Homo
sapiens]
gi|449061959|sp|D6RCP7.1|U17LJ_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
19
Length = 530
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 118/321 (36%), Positives = 184/321 (57%), Gaps = 17/321 (5%)
Query: 102 KPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDH 161
+P VGAGL+N+GNTC++NA LQC T+T PL + S +H + C C++C ++ H
Sbjct: 74 RPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCH--RHKGCMLCTMQAH 131
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES 221
I +L + G V+ P + +++ F R +QEDAHEFL +D ++ CL K
Sbjct: 132 ITRALHNPGHVIQPSQA------LAAGFHRGKQEDAHEFLMFTVDAMKKACLPGH-KQVD 184
Query: 222 LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLE 281
S+ ++ ++FGG S+++C +C SDT++P +D++L+I+ S+ ALE K E
Sbjct: 185 HHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPE 244
Query: 282 KIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK-TDGSYVVKIDKHVEFPLE 340
++ + E + C C ++ K L L V LKRF G+ KI K+V++P
Sbjct: 245 EL-NGENAYHCGVCLQRAPASKTLTLHTSAKVLILVLKRFSDVTGN---KIAKNVQYPEC 300
Query: 341 LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVE 400
LD++PY S Q + L Y LYA++ H G S GHYFSY+++ W++++D+ VT
Sbjct: 301 LDMQPYMS--QTNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASS 358
Query: 401 EEFVLSQDAYILFYAKQGTEW 421
VLSQ AY+LFY Q +EW
Sbjct: 359 ITSVLSQQAYVLFYI-QKSEW 378
>gi|379030610|ref|NP_001243792.1| ubiquitin carboxyl-terminal hydrolase 17-like protein 22 [Homo
sapiens]
gi|449061962|sp|D6RA61.1|U17LM_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
22
Length = 530
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 118/321 (36%), Positives = 184/321 (57%), Gaps = 17/321 (5%)
Query: 102 KPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDH 161
+P VGAGL+N+GNTC++NA LQC T+T PL + S +H + C C++C ++ H
Sbjct: 74 RPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCH--RHKGCMLCTMQAH 131
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES 221
I +L + G V+ P + +++ F R +QEDAHEFL +D ++ CL K
Sbjct: 132 ITRALHNPGHVIQPSQA------LAAGFHRGKQEDAHEFLMFTVDAMKKACLPGH-KQVD 184
Query: 222 LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLE 281
S+ ++ ++FGG S+++C +C SDT++P +D++L+I+ S+ ALE K E
Sbjct: 185 HHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPE 244
Query: 282 KIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK-TDGSYVVKIDKHVEFPLE 340
++ + E + C C ++ K L L V LKRF G+ KI K+V++P
Sbjct: 245 EL-NGENAYHCGVCLQRAPASKTLTLHTSAKVLILVLKRFSDVTGN---KIAKNVQYPEC 300
Query: 341 LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVE 400
LD++PY S Q + L Y LYA++ H G S GHYFSY+++ W++++D+ VT
Sbjct: 301 LDMQPYMS--QQNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASS 358
Query: 401 EEFVLSQDAYILFYAKQGTEW 421
VLSQ AY+LFY Q +EW
Sbjct: 359 ITSVLSQQAYVLFYI-QKSEW 378
>gi|403280795|ref|XP_003931895.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Saimiri
boliviensis boliviensis]
Length = 1119
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 116/312 (37%), Positives = 176/312 (56%), Gaps = 17/312 (5%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL NLGNTCF+NA +QC T+T PL L S +H R C + FC++C +++HI +
Sbjct: 120 VGAGLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGS--FCMLCVMQNHIVQA 177
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
A+SG + P + +L I+ F+ QEDAHEFL+ +D ++ CL+ K + +Q
Sbjct: 178 FANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDR-QTQ 236
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C C S SDTY+P +D++LEI ++ ALE F K + +
Sbjct: 237 ATTLVHQIFGGYLRSRVKCSMCKSVSDTYDPYLDIALEIRQAANIVRALELFVKADVLSG 296
Query: 286 PETKFTCEKCKEQVS-VEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLK 344
E + C K +S V L P+ A K D V +P L+++
Sbjct: 297 -ENAYMCAKIMAVLSRVSSVLSWCAQPTAAMPAAITAKND----------VGYPEFLNIR 345
Query: 345 PYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFV 404
PY S QN+ + Y LYA++ H G S GHY+ Y+++S W+++NDS V + V
Sbjct: 346 PYMS--QNNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVV 403
Query: 405 LSQDAYILFYAK 416
L+Q AY+LFY +
Sbjct: 404 LNQQAYVLFYLR 415
>gi|379030633|ref|NP_001243801.1| inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 8
[Homo sapiens]
gi|187653909|sp|P0C7I0.1|U17L8_HUMAN RecName: Full=Inactive ubiquitin carboxyl-terminal hydrolase
17-like protein 8
Length = 530
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 117/321 (36%), Positives = 184/321 (57%), Gaps = 17/321 (5%)
Query: 102 KPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDH 161
+P VGAGL+N+GNTC++NA LQC T+T PL + S +H + C C++C ++ H
Sbjct: 74 RPAAVGAGLQNMGNTCYLNASLQCLTYTPPLANYMLSREHSQTCQRPK--CCMLCTMQAH 131
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES 221
I +L S G V+ P + +++ F R +QEDAHEFL +D ++ CL K
Sbjct: 132 ITWALHSPGHVIQPSQA------LAAGFHRGKQEDAHEFLMFTVDAMKKACLPGH-KQVD 184
Query: 222 LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLE 281
S+ ++ ++FGGC S+++C +C SDT++P +D++L+I+ S+ ALE K E
Sbjct: 185 HHSKDTTLIHQIFGGCWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVKQALEQLVKPE 244
Query: 282 KIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRF-KTDGSYVVKIDKHVEFPLE 340
++ + E + C C ++ L L V LKRF G+ K+ K+V++P
Sbjct: 245 EL-NGENAYPCGLCLQRAPASNTLTLHTSAKVLILVLKRFCDVTGN---KLAKNVQYPEC 300
Query: 341 LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVE 400
LD++PY S Q + L Y LYA++ H G S G+YFSY+++ W++++D+ VT
Sbjct: 301 LDMQPYMS--QQNTGPLVYVLYAVLVHAGWSCHNGYYFSYVKAQEGQWYKMDDAEVTACS 358
Query: 401 EEFVLSQDAYILFYAKQGTEW 421
VLSQ AY+LFY Q +EW
Sbjct: 359 ITSVLSQQAYVLFYI-QKSEW 378
>gi|187663985|sp|Q6QN14.2|U17L6_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
6; AltName: Full=Deubiquitinating enzyme 17-like protein
6; AltName: Full=Ubiquitin thioesterase 17-like protein
6; AltName: Full=Ubiquitin-specific-processing protease
17-like protein 6
Length = 398
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 118/321 (36%), Positives = 184/321 (57%), Gaps = 17/321 (5%)
Query: 102 KPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDH 161
+P VGAGL+N+GNTC++NA LQC T+T PL + S +H + C C++C ++ H
Sbjct: 74 RPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCH--RHKGCMLCTMQAH 131
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES 221
I +L + G V+ P + +++ F R +QEDAHEFL +D ++ CL K
Sbjct: 132 ITRALHNPGHVIQPSQA------LAAGFHRGKQEDAHEFLMFTVDAMKKACLPGH-KQVD 184
Query: 222 LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLE 281
S+ ++ ++FGG S+++C +C SDT++P +D++L+I+ S+ ALE K E
Sbjct: 185 HHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPE 244
Query: 282 KIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK-TDGSYVVKIDKHVEFPLE 340
++ + E + C C ++ K L L V LKRF G+ KI K+V++P
Sbjct: 245 EL-NGENAYHCGVCLQRAPASKTLTLHTSAKVLILVLKRFSDVTGN---KIAKNVQYPEC 300
Query: 341 LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVE 400
LD++PY S Q + L Y LYA++ H G S GHYFSY+++ W++++D+ VT
Sbjct: 301 LDMQPYMS--QQNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASS 358
Query: 401 EEFVLSQDAYILFYAKQGTEW 421
VLSQ AY+LFY Q +EW
Sbjct: 359 ITSVLSQQAYVLFYI-QKSEW 378
>gi|33333162|gb|AAQ11742.1| deubiquitinating enzyme DUB2 [Homo sapiens]
Length = 530
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 122/341 (35%), Positives = 191/341 (56%), Gaps = 23/341 (6%)
Query: 102 KPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDH 161
+P VGAGL+N+GNTC++NA LQC T+T PL + S +H + C C++C ++ H
Sbjct: 74 RPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCH--RHKGCMLCTMQAH 131
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES 221
I +L + G V+ P + +++ F R +QEDAHEFL +D ++ CL K
Sbjct: 132 ITRALHNPGHVIQPSQA------LAAGFHRGKQEDAHEFLMFTVDAMKKACLPGH-KQVD 184
Query: 222 LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLE 281
S+ ++ ++FGG S+++C +C SDT++P +D++L+I+ S+ ALE K E
Sbjct: 185 HHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPE 244
Query: 282 KIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK-TDGSYVVKIDKHVEFPLE 340
++ + E + C C ++ K L L V LKRF G+ KI K+V++P
Sbjct: 245 EL-NGENAYHCGVCLQRAPASKTLTLHTSAKVLILVLKRFSDVTGN---KIAKNVQYPEC 300
Query: 341 LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVE 400
LD++PY S Q + L Y LYA++ H G S GHYFSY+++ W++++D+ VT
Sbjct: 301 LDMQPYMS--QQNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASS 358
Query: 401 EEFVLSQDAYILFYAKQGTEW------VSSLLEAESIGMNA 435
VL+Q AY+LFY Q +EW VS E ++G A
Sbjct: 359 ITPVLTQQAYVLFYI-QKSEWERHSESVSRGREPRALGAEA 398
>gi|379030604|ref|NP_001243790.1| ubiquitin carboxyl-terminal hydrolase 17-like protein 20 [Homo
sapiens]
gi|449061960|sp|D6RJB6.1|U17LK_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
20
Length = 530
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 118/321 (36%), Positives = 184/321 (57%), Gaps = 17/321 (5%)
Query: 102 KPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDH 161
+P VGAGL+N+GNTC++NA LQC T+T PL + S +H + C C++C ++ H
Sbjct: 74 RPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCH--RHKGCMLCTMQAH 131
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES 221
I +L + G V+ P + +++ F R +QEDAHEFL +D ++ CL K
Sbjct: 132 ITRALHNPGHVIQPSQA------LAAGFHRGKQEDAHEFLMFTVDAMKKACLPGH-KQVD 184
Query: 222 LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLE 281
S+ ++ ++FGG S+++C +C SDT++P +D++L+I+ S+ ALE K E
Sbjct: 185 HHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPE 244
Query: 282 KIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK-TDGSYVVKIDKHVEFPLE 340
++ + E + C C ++ K L L V LKRF G+ KI K+V++P
Sbjct: 245 EL-NGENAYHCGVCLQRAPASKTLTLHTSAKVLILVLKRFSDVTGN---KIAKNVQYPEC 300
Query: 341 LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVE 400
LD++PY S Q + L Y LYA++ H G S GHYFSY+++ W++++D+ VT
Sbjct: 301 LDMQPYMS--QPNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASS 358
Query: 401 EEFVLSQDAYILFYAKQGTEW 421
VLSQ AY+LFY Q +EW
Sbjct: 359 ITSVLSQQAYVLFYI-QKSEW 378
>gi|334191675|ref|NP_001229255.1| ubiquitin specific peptidase 17-like family member 25 [Homo
sapiens]
gi|334191677|ref|NP_001229257.1| ubiquitin specific peptidase 17-like family member 26 [Homo
sapiens]
gi|334191681|ref|NP_001229259.1| ubiquitin specific peptidase 17-like family member 27 [Homo
sapiens]
gi|334191683|ref|NP_001229260.1| ubiquitin specific peptidase 17-like family member 28 [Homo
sapiens]
gi|334191685|ref|NP_001229261.1| ubiquitin specific peptidase 17-like family member 29 [Homo
sapiens]
gi|337756779|ref|NP_001229256.1| ubiquitin specific peptidase 17-like family member 24 [Homo
sapiens]
gi|379030622|ref|NP_001243796.1| ubiquitin specific peptidase 17-like family member 30 [Homo
sapiens]
gi|187663978|sp|Q0WX57.2|U17LO_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
24; AltName: Full=Deubiquitinating enzyme 17; AltName:
Full=Ubiquitin thioesterase 17; AltName:
Full=Ubiquitin-specific-processing protease 17
Length = 530
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 118/321 (36%), Positives = 184/321 (57%), Gaps = 17/321 (5%)
Query: 102 KPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDH 161
+P VGAGL+N+GNTC++NA LQC T+T PL + S +H + C C++C ++ H
Sbjct: 74 RPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCH--RHKGCMLCTMQAH 131
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES 221
I +L + G V+ P + +++ F R +QEDAHEFL +D ++ CL K
Sbjct: 132 ITRALHNPGHVIQPSQA------LAAGFHRGKQEDAHEFLMFTVDAMKKACLPGH-KQVD 184
Query: 222 LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLE 281
S+ ++ ++FGG S+++C +C SDT++P +D++L+I+ S+ ALE K E
Sbjct: 185 HHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPE 244
Query: 282 KIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK-TDGSYVVKIDKHVEFPLE 340
++ + E + C C ++ K L L V LKRF G+ KI K+V++P
Sbjct: 245 EL-NGENAYHCGVCLQRAPASKTLTLHTSAKVLILVLKRFSDVTGN---KIAKNVQYPEC 300
Query: 341 LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVE 400
LD++PY S Q + L Y LYA++ H G S GHYFSY+++ W++++D+ VT
Sbjct: 301 LDMQPYMS--QPNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASS 358
Query: 401 EEFVLSQDAYILFYAKQGTEW 421
VLSQ AY+LFY Q +EW
Sbjct: 359 ITSVLSQQAYVLFYI-QKSEW 378
>gi|118388360|ref|XP_001027278.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila]
gi|89309048|gb|EAS07036.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila SB210]
Length = 778
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 114/312 (36%), Positives = 181/312 (58%), Gaps = 11/312 (3%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
+G GL NLGNTCF N++LQC T+T PL L S +H + C E FC IC L HIE
Sbjct: 53 IGPGLANLGNTCFFNSVLQCLTYTPPLANYLLSGEHKKTC-PRKESFCAICLLEQHIEQC 111
Query: 166 LASSGK-VLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSS 224
+ + V+ PRK++ N+ YI+ F+ +Q+D+HE L+ LL+ ++ LD K K +
Sbjct: 112 FSQNRPPVVQPRKIIQNMRYINKKFKLGRQDDSHELLRLLLESMQKSALDFKPKVDQKIE 171
Query: 225 QGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIE 284
+ I ++F G L S+++C C S+ E DLSLE ++ S+ + E F + EK+E
Sbjct: 172 EATPIY-KMFAGKLKSQVECSVCNYRSENIEAFYDLSLECKE--SVQKSFELFFRKEKLE 228
Query: 285 DPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLK 344
K+ C KCK+ V +K ++ ++P+V +KRF ++++KI+ H +FP E+D+
Sbjct: 229 G-NNKYRCSKCKKLVEAQKGYVIHQLPNVLTLQIKRF---NNFMMKINTHTQFPAEIDIS 284
Query: 345 PYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFV 404
Y N E+ Y LY ++ H+G GHY+ Y+++S D W+ +NDS V++ + V
Sbjct: 285 KYVQQA-NKKPEI-YDLYGVLIHIGGGLHFGHYYCYVKNSNDMWYCMNDSSVSQRSFQEV 342
Query: 405 LSQDAYILFYAK 416
+ Y+LFY K
Sbjct: 343 SKERPYLLFYVK 354
>gi|334191679|ref|NP_001229258.1| ubiquitin carboxyl-terminal hydrolase 17-like protein 5 [Homo
sapiens]
gi|187663984|sp|A8MUK1.2|U17L5_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
5; AltName: Full=Deubiquitinating enzyme 17-like protein
5; AltName: Full=Ubiquitin thioesterase 17-like protein
5; AltName: Full=Ubiquitin-specific-processing protease
17-like protein 5
Length = 530
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 118/321 (36%), Positives = 184/321 (57%), Gaps = 17/321 (5%)
Query: 102 KPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDH 161
+P VGAGL+N+GNTC++NA LQC T+T PL + S +H + C C++C ++ H
Sbjct: 74 RPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCH--RHKGCMLCTMQAH 131
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES 221
I +L + G V+ P + +++ F R +QEDAHEFL +D ++ CL K
Sbjct: 132 ITRALHNPGHVIQPSQA------LAAGFHRGKQEDAHEFLMFTVDAMKKACLPGH-KQVD 184
Query: 222 LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLE 281
S+ ++ ++FGG S+++C +C SDT++P +D++L+I+ S+ ALE K E
Sbjct: 185 HHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLAKPE 244
Query: 282 KIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK-TDGSYVVKIDKHVEFPLE 340
++ + E + C C ++ K L L V LKRF G+ KI K+V++P
Sbjct: 245 EL-NGENAYHCGVCLQRAPASKTLTLHTSAKVLILVLKRFSDVTGN---KIAKNVQYPEC 300
Query: 341 LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVE 400
LD++PY S Q + L Y LYA++ H G S GHYFSY+++ W++++D+ VT
Sbjct: 301 LDMQPYMS--QPNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASS 358
Query: 401 EEFVLSQDAYILFYAKQGTEW 421
VLSQ AY+LFY Q +EW
Sbjct: 359 ITSVLSQQAYVLFYI-QKSEW 378
>gi|351702295|gb|EHB05214.1| Ubiquitin carboxyl-terminal hydrolase 17 [Heterocephalus glaber]
Length = 491
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 120/349 (34%), Positives = 197/349 (56%), Gaps = 27/349 (7%)
Query: 102 KPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDH 161
+P GVGAGL NLGNTC++NA LQC T+T PL + S +H C T C++CAL+ H
Sbjct: 41 RPHGVGAGLWNLGNTCYVNATLQCLTYTPPLANYMLSREHKPTCPSLTG--CMLCALQRH 98
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES 221
+ +L G+V+ P L+ + + F R +QEDAHEFL ++D ++ L S+ ++
Sbjct: 99 VTHALRHPGRVIQP------LHTLIAAFHRQKQEDAHEFLMFIVDAMQQAELHSEDRE-- 150
Query: 222 LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLE 281
++ +FGG S+++C +CGS SDT++P +D++L+I+ S+ AL E
Sbjct: 151 -------LMHHIFGGYWRSQIKCLHCGSTSDTFDPYLDITLDIKAAQSVKQALTRSIAPE 203
Query: 282 KIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLEL 341
++ + + C C +++ K + L V LKRF K KHV++ L
Sbjct: 204 ELSG-DNAYHCSVCLQKMPATKTMSLHTSSEVLILVLKRFSDFTGE--KFAKHVQYSECL 260
Query: 342 DLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEE 401
D++PY S + + L Y LYA++ H GS+ GHYFSY+++ W+++ND++VT +
Sbjct: 261 DMQPYMS--EQNRGPLLYTLYAVLIHAGSTCHSGHYFSYVKAGDGRWYQMNDNKVTACDT 318
Query: 402 EFVLSQDAYILFYAKQG-----TEWVSSLLEAESIGMNADISNSSPKSV 445
VL+QDAY+LFY ++ + + EA+ +G A+ +SP+ +
Sbjct: 319 RCVLAQDAYVLFYVRKTNLPKDSGAPPAGTEAKPLGSEAEHRRASPREL 367
>gi|378925632|ref|NP_001243782.1| ubiquitin carboxyl-terminal hydrolase 17-like protein 12 [Homo
sapiens]
gi|449061964|sp|C9JPN9.1|UL17C_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
12
Length = 530
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 118/321 (36%), Positives = 184/321 (57%), Gaps = 17/321 (5%)
Query: 102 KPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDH 161
+P VGAGL+N+GNTC++NA LQC T+T PL + S +H + C C++C ++ H
Sbjct: 74 RPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCH--RHKGCMLCTMQAH 131
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES 221
I +L + G V+ P + +++ F R +QEDAHEFL +D ++ CL K
Sbjct: 132 ITRALHNPGHVIQPSQA------LAAGFHRGKQEDAHEFLMFTVDAMKKACLPGH-KQVD 184
Query: 222 LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLE 281
S+ ++ ++FGG S+++C +C SDT++P +D++L+I+ S+ ALE K E
Sbjct: 185 HHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPE 244
Query: 282 KIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK-TDGSYVVKIDKHVEFPLE 340
++ + E + C C ++ K L L V LKRF G+ KI K+V++P
Sbjct: 245 EL-NGENAYHCGVCLQRAPASKMLTLLTSAKVLILVLKRFSDVTGN---KIAKNVQYPEC 300
Query: 341 LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVE 400
LD++PY S Q + L Y LYA++ H G S GHYFSY+++ W++++D+ VT
Sbjct: 301 LDMQPYMS--QPNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASS 358
Query: 401 EEFVLSQDAYILFYAKQGTEW 421
VLSQ AY+LFY Q +EW
Sbjct: 359 ITSVLSQQAYVLFYI-QKSEW 378
>gi|167526008|ref|XP_001747338.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774173|gb|EDQ87805.1| predicted protein [Monosiga brevicollis MX1]
Length = 1125
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 116/316 (36%), Positives = 185/316 (58%), Gaps = 10/316 (3%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
+G GL N+GNTCF+NA+LQC T+T L Q L S D R +G + L H+ +
Sbjct: 200 IGPGLVNMGNTCFLNAVLQCLTYTPALAQFLLSDDCTRMSR--NKGPDALHNLATHVRRA 257
Query: 166 LASS-GKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTK-DESLS 223
L+SS G ++P+ +V L I F+ +QEDAHEF++ L++ L+ + + + DE
Sbjct: 258 LSSSAGPSITPQAIVSKLRTIYKRFRLGRQEDAHEFMRFLIEALQKSAVSTVGQLDER-- 315
Query: 224 SQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKI 283
S+ +++ +FGG L S+++C +C S+TY+P +DLSLEI +L AL F EK+
Sbjct: 316 SKTTSVIHGIFGGYLRSQVRCLSCKYESNTYDPFLDLSLEIGKCQTLDKALRHFFSPEKL 375
Query: 284 EDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDL 343
E ++ C+ C++ V KQ +P+V LKRF + K+ + V++P LD+
Sbjct: 376 LR-ENQYRCDGCRKYVDALKQFSCHHLPNVLTVQLKRFSFISMFGSKVGQFVQYPEILDM 434
Query: 344 KPYTSGGQNS---DVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVE 400
PY + Q + D +Y LYA++ H G S GHY+ Y+R+S + W+R++D+RV+
Sbjct: 435 APYVNKTQQASMTDRGTRYRLYAVLVHAGHSLQSGHYYCYVRNSNNIWYRMDDARVSTAS 494
Query: 401 EEFVLSQDAYILFYAK 416
++ V+ Q AYILFY +
Sbjct: 495 QQEVMRQQAYILFYTR 510
>gi|379030606|ref|NP_001243791.1| ubiquitin carboxyl-terminal hydrolase 17-like protein 21 [Homo
sapiens]
gi|449061961|sp|D6R901.1|U17LL_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
21
Length = 530
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 118/321 (36%), Positives = 184/321 (57%), Gaps = 17/321 (5%)
Query: 102 KPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDH 161
+P VGAGL+N+GNTC++NA LQC T+T PL + S +H + C C++C ++ H
Sbjct: 74 RPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCH--RHKGCMLCTMQAH 131
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES 221
I +L + G V+ P + +++ F R +QEDAHEFL +D ++ CL K
Sbjct: 132 ITRALHNPGHVIQPSQA------LAAGFHRGKQEDAHEFLMFTVDAMKKACLPGH-KQVD 184
Query: 222 LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLE 281
S+ ++ ++FGG S+++C +C SDT++P +D++L+I+ S+ ALE K E
Sbjct: 185 HHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPE 244
Query: 282 KIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK-TDGSYVVKIDKHVEFPLE 340
++ + E + C C ++ K L L V LKRF G+ KI K+V++P
Sbjct: 245 EL-NGENAYHCGVCLQRAPASKMLTLLTSAKVLILVLKRFSDVTGN---KIAKNVQYPEC 300
Query: 341 LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVE 400
LD++PY S Q + L Y LYA++ H G S GHYFSY+++ W++++D+ VT
Sbjct: 301 LDMQPYMS--QPNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASS 358
Query: 401 EEFVLSQDAYILFYAKQGTEW 421
VLSQ AY+LFY Q +EW
Sbjct: 359 ITSVLSQQAYVLFYI-QKSEW 378
>gi|37778800|gb|AAO38845.1| deubiquitinating enzyme 3 [Homo sapiens]
Length = 530
Score = 212 bits (539), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 118/321 (36%), Positives = 184/321 (57%), Gaps = 17/321 (5%)
Query: 102 KPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDH 161
+P VGAGL+N+GNTC++NA LQC T+T PL + S +H + C C++C ++ H
Sbjct: 74 RPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCH--RHKGCMLCTMQAH 131
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES 221
I +L + G V+ P + +++ F R +QEDAHEFL +D ++ CL K
Sbjct: 132 ITRALHNPGHVIQPSQA------LAAGFHRGKQEDAHEFLMFTVDAMKKACLPGH-KQVD 184
Query: 222 LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLE 281
S+ ++ ++FGG S+++C +C SDT++P +D++L+I+ S+ ALE K E
Sbjct: 185 HHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPE 244
Query: 282 KIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK-TDGSYVVKIDKHVEFPLE 340
++ + E + C C ++ K L L V LKRF G+ KI K+V++P
Sbjct: 245 EL-NGENAYHCGVCLQRAPASKTLTLHTSAKVLILVLKRFSDVTGN---KIAKNVQYPEC 300
Query: 341 LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVE 400
LD++PY S Q + L Y LYA++ H G S GHYFSY+++ W++++D+ VT
Sbjct: 301 LDMQPYMS--QPNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASS 358
Query: 401 EEFVLSQDAYILFYAKQGTEW 421
VLSQ AY+LFY Q +EW
Sbjct: 359 IISVLSQQAYVLFYI-QKSEW 378
>gi|15088628|gb|AAK84135.1|AF393637_1 deubiquitinating enzyme 2A [Mus musculus]
Length = 545
Score = 212 bits (539), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 116/317 (36%), Positives = 185/317 (58%), Gaps = 16/317 (5%)
Query: 103 PTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHI 162
P G G GL+N GN+C++NA LQC THT PL + S ++ + C + EG C +CA+ H+
Sbjct: 46 PQGPGCGLQNTGNSCYLNAALQCLTHTPPLADYMLSQEYSQTC-CSPEG-CKMCAMEAHV 103
Query: 163 ELSL--ASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDE 220
SL + SG V+ P ++ ++S F ++QQEDAHEFL L+ + CL + E
Sbjct: 104 TQSLLHSHSGDVMKPSQI------LTSAFHKHQQEDAHEFLMFTLETMHESCLQVHRQSE 157
Query: 221 SLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKL 280
+S+ + + +FGG S+++C +C SDTY+ +D+ L+I S+ AL K
Sbjct: 158 P-TSEDSSPIHDIFGGLWRSQIKCLHCQGTSDTYDRFLDVPLDISSAQSVNQALWDTEKS 216
Query: 281 EKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE 340
E++ E + C +C++++ K L + P V LKRF S K+D+ V +P
Sbjct: 217 EELRG-ENAYYCGRCRQKMPASKTLHIHSAPKVLLLVLKRF--SASMGNKLDRKVSYPEF 273
Query: 341 LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVE 400
LDLKPY S Q + L Y LYA++ H G++ GHYFSY+++ W++++D++VT +
Sbjct: 274 LDLKPYLS--QPTGGPLPYALYAVLVHEGATCHSGHYFSYVKAGHGKWYKMDDTKVTSCD 331
Query: 401 EEFVLSQDAYILFYAKQ 417
VL+++AY+LFY +Q
Sbjct: 332 VTSVLNENAYVLFYVQQ 348
>gi|379030637|ref|NP_001243803.1| inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 4
[Homo sapiens]
gi|187663999|sp|A6NCW7.3|U17L4_HUMAN RecName: Full=Inactive ubiquitin carboxyl-terminal hydrolase
17-like protein 4
Length = 530
Score = 212 bits (539), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 116/320 (36%), Positives = 181/320 (56%), Gaps = 15/320 (4%)
Query: 102 KPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDH 161
+P VGAGL+N+GNTC+ NA LQC T+TLPL + S +H + C C++C ++ H
Sbjct: 74 RPAAVGAGLQNMGNTCYENASLQCLTYTLPLANYMLSREHSQTCQRPK--CCMLCTMQAH 131
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES 221
I +L S G V+ P + +++ F R +QED HEFL +D ++ CL K
Sbjct: 132 ITWALHSPGHVIQPSQA------LAAGFHRGKQEDVHEFLMFTVDAMKKACLPGH-KQVD 184
Query: 222 LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLE 281
S+ ++ ++FGGC S+++C +C SDT++P +D++L+I+ S+ ALE K E
Sbjct: 185 HHSKDTTLIHQIFGGCWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVKQALEQLVKPE 244
Query: 282 KIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLEL 341
++ + E + C C ++ L L V LKRF K+ K+V++P L
Sbjct: 245 EL-NGENAYHCGLCLQRAPASNTLTLHTSAKVLILVLKRFSDVAGN--KLAKNVQYPECL 301
Query: 342 DLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEE 401
D++PY S Q + L Y LYA++ H G S G+YFSY+++ W++++D+ VT
Sbjct: 302 DMQPYMS--QQNTGPLVYVLYAVLVHAGWSCHDGYYFSYVKAQEGQWYKMDDAEVTVCSI 359
Query: 402 EFVLSQDAYILFYAKQGTEW 421
VLSQ AY+LFY Q +EW
Sbjct: 360 TSVLSQQAYVLFYI-QKSEW 378
>gi|431904918|gb|ELK10055.1| Ubiquitin carboxyl-terminal hydrolase 17-like protein 2 [Pteropus
alecto]
Length = 492
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 120/317 (37%), Positives = 176/317 (55%), Gaps = 18/317 (5%)
Query: 103 PTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHI 162
P VGAGL NLGNTC+ NA LQC T+T PL + L S H C CV+CA+R H+
Sbjct: 39 PLAVGAGLRNLGNTCYANAALQCLTYTAPLARCLLSRRHAEACQRPAS--CVLCAMRAHV 96
Query: 163 ELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESL 222
+ G+V+ P + + F R++QEDAHEFL +D ++ CL + +
Sbjct: 97 ARARRCRGEVIQP------ATGLIAGFHRHKQEDAHEFLMFTVDAMQQACL--REPERRG 148
Query: 223 SSQGDNI-VQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLE 281
GD+ ++R+FGG S+++C C SDT +P +D++L+I+ S+ ALE K E
Sbjct: 149 RRCGDSTPIRRIFGGYWRSQVKCLRCHGVSDTLDPYLDITLDIQAAQSVTQALELLVKPE 208
Query: 282 KIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKT-DGSYVVKIDKHVEFPLE 340
K+ D + + C C E+V K L L V LKRF GS K+ K V++P
Sbjct: 209 KL-DGDNSYHCGVCLEKVPASKTLTLHAPSEVLILVLKRFSDFTGS---KLAKEVQYPEH 264
Query: 341 LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVE 400
LD++ Y S Q L+Y LYA++ H G + GHYF YI++ W +++D++VT +
Sbjct: 265 LDMRQYLS--QQDAGPLEYELYAVLVHAGGTCRSGHYFCYIKAGNGQWFKMDDAKVTACD 322
Query: 401 EEFVLSQDAYILFYAKQ 417
LSQDAY+LFY ++
Sbjct: 323 VSSALSQDAYVLFYIQK 339
>gi|45386059|gb|AAS59847.1| deubiquitinating enzyme DUB4 [Homo sapiens]
Length = 398
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 117/321 (36%), Positives = 184/321 (57%), Gaps = 17/321 (5%)
Query: 102 KPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDH 161
+P VGAGL+N+GNTC++NA LQC T+T PL + S +H + C C++C ++ H
Sbjct: 74 RPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCH--RHKGCMLCTMQAH 131
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES 221
I +L + G V+ P + +++ F R +QEDAHEFL +D ++ CL K
Sbjct: 132 ITRALHNPGHVIQPSQA------LAAGFHRGKQEDAHEFLMFTVDAMKKACLPGH-KQVD 184
Query: 222 LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLE 281
S+ ++ ++FGG S+++C +C SDT++P +D++L+I+ S+ ALE K E
Sbjct: 185 HHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPE 244
Query: 282 KIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK-TDGSYVVKIDKHVEFPLE 340
++ + E + C C ++ K L L V LKRF G+ KI K+V++P
Sbjct: 245 EL-NGENAYHCGVCLQRAPASKTLTLHTSAKVLILVLKRFSDVTGN---KIAKNVQYPEC 300
Query: 341 LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVE 400
LD++PY S Q + L Y LYA++ H G S GHYFSY+++ W++++D+ VT
Sbjct: 301 LDMQPYMS--QQNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASS 358
Query: 401 EEFVLSQDAYILFYAKQGTEW 421
VL+Q AY+LFY Q +EW
Sbjct: 359 ITSVLTQQAYVLFYI-QKSEW 378
>gi|109133433|ref|XP_001082678.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Macaca
mulatta]
Length = 530
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 118/321 (36%), Positives = 182/321 (56%), Gaps = 17/321 (5%)
Query: 102 KPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDH 161
+P VGAGL+N+GNTC++NA LQC T+T PL + S +H C C++C ++ H
Sbjct: 74 RPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSPTCH--RHKGCMLCTMQAH 131
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES 221
I +L G+V+ P + +++ F R +QEDAHEFL +D ++ CL K
Sbjct: 132 ITRALHIPGRVIQPSQA------LAADFHRGKQEDAHEFLMFTVDAMKKACLPGH-KQVD 184
Query: 222 LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLE 281
S+ ++ ++FGG S+++C +C SDT++P +D++L+I+ S+ ALE K E
Sbjct: 185 HHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVKQALEQLVKPE 244
Query: 282 KIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK-TDGSYVVKIDKHVEFPLE 340
++ + E + C C ++ K L L V LKRF GS K+ K+V +P
Sbjct: 245 EL-NGENAYHCGLCLQRAPASKTLTLHTSAKVLILVLKRFSDVTGS---KLAKNVHYPEC 300
Query: 341 LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVE 400
LD++PY S Q + L Y LYA++ H G S GHYFSY+++ W++++D+ VT
Sbjct: 301 LDMQPYMS--QQNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASS 358
Query: 401 EEFVLSQDAYILFYAKQGTEW 421
VLSQ AY+LFY Q +EW
Sbjct: 359 ITSVLSQQAYVLFYI-QKSEW 378
>gi|168051663|ref|XP_001778273.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670370|gb|EDQ56940.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 375
Score = 211 bits (538), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 124/334 (37%), Positives = 188/334 (56%), Gaps = 29/334 (8%)
Query: 155 ICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLD 214
+CAL++HI +LAS G V+SP +V NL IS F+ ++QEDAHE+++ L++ L++ C
Sbjct: 1 MCALQEHIRQALASPGGVISPTYIVKNLRCISKSFRPWRQEDAHEYMRYLIESLDNSCTS 60
Query: 215 SKTKDESLSSQGD--------------NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDL 260
+ + + G +++Q++FGG L S+++C C +CS+TY+PL+DL
Sbjct: 61 AGRGERGVRGAGAQSSSSSSSSSPQHPSLIQQMFGGQLRSQVKCTVCSTCSNTYDPLLDL 120
Query: 261 SLEIEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKR 320
SLEI SL AL FT +E +E + ++ C CK++V KQ +DK P V KR
Sbjct: 121 SLEIVRADSLTKALNRFTAVEALEG-DNQYHCATCKQKVCALKQFTIDKSPIVLTIQFKR 179
Query: 321 FKTDGSYVV-KIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFS 379
F GS KIDK ++F L ++PY S ++SD Y LYA++ H G S GHY+
Sbjct: 180 FSASGSSSGGKIDKKIDFGRTLAMRPYISNPEDSDAN--YSLYAVLVHAGWSTHSGHYYC 237
Query: 380 YIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEWVSSLLEAESIGMN----- 434
++R+S WH L+DSRV +V E+ VL Q AYILFY + E S+ L A+ +
Sbjct: 238 FVRTSGGLWHNLDDSRVRQVSEKTVLEQKAYILFYIRDPPE--SAALSADPPSSSSPTTR 295
Query: 435 ---ADISNSSPKSVLDNVENDYTSRSGVANAESC 465
+D +N P ++ VE ++ S S C
Sbjct: 296 SWLSDGANGDPDRIVGGVE-EFPSSSSCTRPSDC 328
>gi|389744531|gb|EIM85714.1| cysteine proteinase [Stereum hirsutum FP-91666 SS1]
Length = 766
Score = 211 bits (537), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 125/405 (30%), Positives = 205/405 (50%), Gaps = 33/405 (8%)
Query: 97 WPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVIC 156
WP + T +GAGL N GNTCF+N+ LQC HT L+ L + PC +GFC+ C
Sbjct: 131 WPKGV--THIGAGLHNTGNTCFLNSALQCLLHTPGLLHILLAHTKTDPCR--AKGFCMSC 186
Query: 157 ALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSK 216
LR + S + + +P ++ +NL+ I+ +R +QED+HEFL+ +D L+ CL
Sbjct: 187 CLRGVLLNSHFTRQRSFTPAQVTNNLSAIAKHLRRGRQEDSHEFLRYAIDALQKSCLAGY 246
Query: 217 TKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALES 276
V ++FGG L S++ C +CG SDT++ ++DLS++I S+ AL+
Sbjct: 247 PPKLDPKLAETTWVHKLFGGKLRSRVTCQSCGHNSDTFDNILDLSIDIFGASSVQQALKK 306
Query: 277 FTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVE 336
F ++ ++ + K+ C+ CK +V EK+ + + P V HLKRF G KI ++
Sbjct: 307 FVAIDSLKGAD-KYKCDACKRRVVAEKRFTIHEAPVVLTIHLKRFSPLGR---KIGHAIK 362
Query: 337 FPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRV 396
+ +L L PY S GQ Y LY ++ H G P GHY++++R +W+ +ND V
Sbjct: 363 YDEKLTLAPYMSEGQ---FGPSYALYGVISHAGGGPNSGHYYAHVRGPNGSWYEMNDETV 419
Query: 397 TRV---EEEFVLSQDAYILFYAKQGTEWVSSLLEAESIGMNADISNSSPKSVLDNVENDY 453
T E + AY+LFY + + + + ++GMN + V N ++
Sbjct: 420 TPAGMGGEAPTGLRSAYMLFYVMEKGQALQA-----AVGMNGAGA-----YVNGNAHSNG 469
Query: 454 TSRSGVANAESCKANEPSASAGDSSTKFSCQLRSIDLEVNETRDT 498
++G N + K+ + + +SID E+ E + T
Sbjct: 470 HGQNGAVNGRNTKS---------VIGAMNGKRKSIDREMEEEKTT 505
>gi|291408075|ref|XP_002720394.1| PREDICTED: deubiquitinating enzyme 3-like [Oryctolagus cuniculus]
Length = 503
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 120/325 (36%), Positives = 184/325 (56%), Gaps = 26/325 (8%)
Query: 99 IQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICAL 158
I +P G+GAGL+N+GNTC++NA LQC T+T PL + S H + C GFC++CA+
Sbjct: 47 IWKRPYGIGAGLQNMGNTCYMNATLQCLTYTPPLANYMLSQAHSQTCR--PSGFCMLCAV 104
Query: 159 RDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDS--- 215
H +L S G V+ P +++ F R +QEDAHEFL +D L++ L
Sbjct: 105 ETHFLWALHSPGDVIQP------CQALAAAFHRNRQEDAHEFLVFTVDALKAAGLPGLMN 158
Query: 216 ---KTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGS 272
+D+SLS Q +FGG S+++C C SDT +P +D++L+I+ S+
Sbjct: 159 VVGPKEDKSLSHQ-------IFGGYWKSQIKCLQCQGVSDTLDPYLDIALDIKTADSVQQ 211
Query: 273 ALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKID 332
ALE K E++ D E + C C ++ + K L+L +V F LKRF KI
Sbjct: 212 ALEQLVKPEEL-DGENAYECGICLKKTAASKTLVLQSSGNVLIFVLKRFSDFTGE--KIA 268
Query: 333 KHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLN 392
+ V++P LD++PY S Q S L+Y LYA + H+G GHYF Y+++ W++++
Sbjct: 269 RQVQYPECLDMRPYMS--QQSGRPLEYVLYAALVHVGLRCQKGHYFCYVKAGNGHWYKMD 326
Query: 393 DSRVTRVEEEFVLSQDAYILFYAKQ 417
D++VT + VL+Q AY+LFY ++
Sbjct: 327 DAKVTACDITSVLNQSAYVLFYVQK 351
>gi|74206968|dbj|BAE33280.1| unnamed protein product [Mus musculus]
gi|187952153|gb|AAI39143.1| Ubiquitin specific peptidase, pseudogene (USP17 homolog) [Mus
musculus]
Length = 541
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 116/317 (36%), Positives = 183/317 (57%), Gaps = 16/317 (5%)
Query: 103 PTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHI 162
P G+G GL+N GN+C++NA LQC THT PL + S +H + C + EG C +CA+ H+
Sbjct: 80 PQGLGCGLQNTGNSCYLNAALQCLTHTPPLADYMLSQEHSQTC-CSPEG-CKMCAMEAHV 137
Query: 163 ELSL--ASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDE 220
SL SG ++ P ++ ++S F +YQQEDAHEFL L+ + CL + E
Sbjct: 138 TQSLLHTHSGDIMKPSQI------LTSAFHKYQQEDAHEFLMFTLETMHESCLQVHRQSE 191
Query: 221 SLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKL 280
+S+ + + +FGG S+++C C SDTY+P +D+ L+I S+ AL K
Sbjct: 192 P-TSEDSSPIHDIFGGWWRSQIKCLLCQGTSDTYDPFLDVPLDISSAQSVNQALWDTEKS 250
Query: 281 EKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE 340
E++ E + C +C++++ K L + P V LKRF K+D+ V +P
Sbjct: 251 EELHG-ENAYYCGRCRQKMPASKTLHVHIAPKVLLLVLKRFSAFTGN--KLDRKVSYPEF 307
Query: 341 LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVE 400
LDLKPY S Q + L Y LYA++ H G++ GHYF +++ W++++D++VTR +
Sbjct: 308 LDLKPYLS--QPTAGPLPYALYAVLVHDGATCHSGHYFCCVKAGHGKWYKMDDTKVTRCD 365
Query: 401 EEFVLSQDAYILFYAKQ 417
VL+++AY+LFY +Q
Sbjct: 366 VTSVLNENAYVLFYVQQ 382
>gi|379030635|ref|NP_001243802.1| putative ubiquitin carboxyl-terminal hydrolase 17-like protein 1
[Homo sapiens]
gi|74723224|sp|Q7RTZ2.1|U17L1_HUMAN RecName: Full=Putative ubiquitin carboxyl-terminal hydrolase
17-like protein 1; AltName: Full=Deubiquitinating enzyme
17-like protein 1; AltName: Full=Ubiquitin thioesterase
17-like protein 1; AltName:
Full=Ubiquitin-specific-processing protease 17-like
protein 1
gi|33186790|tpe|CAD66056.1| TPA: ubiquitin-specific protease 17-like protein [Homo sapiens]
Length = 530
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 119/326 (36%), Positives = 182/326 (55%), Gaps = 27/326 (8%)
Query: 102 KPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDH 161
+P VGAGL+N+GNTC+ NA LQC T+TLPL + S +H + C C++C ++ H
Sbjct: 74 RPAAVGAGLQNMGNTCYENASLQCLTYTLPLANYMLSREHSQTCQ--RPKCCMLCTMQAH 131
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL------DS 215
I +L S G V+ P + +++ F R +QED HEFL +D ++ CL D
Sbjct: 132 ITWALHSPGHVIQPSQA------LAAGFHRGKQEDVHEFLMFTVDAMKKACLPGHKQVDH 185
Query: 216 KTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALE 275
KD +L + ++FGGC S+++C +C SDT++P +D++L+I+ S+ ALE
Sbjct: 186 HCKDTTL-------IHQIFGGCWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVKQALE 238
Query: 276 SFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHV 335
K E++ + E + C C ++ L L V LKRF K+ K+V
Sbjct: 239 QLVKPEEL-NGENAYHCGLCLQRAPASNTLTLHTSAKVLILVLKRFSDVAGN--KLAKNV 295
Query: 336 EFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSR 395
++P LD++PY S Q + L Y LYA++ H G S GHYFSY+++ W++++D+
Sbjct: 296 QYPECLDMQPYMS--QQNTGPLVYVLYAVLVHAGWSCHDGHYFSYVKAQEVQWYKMDDAE 353
Query: 396 VTRVEEEFVLSQDAYILFYAKQGTEW 421
VT VLSQ AY+LFY Q +EW
Sbjct: 354 VTVCSIISVLSQQAYVLFYI-QKSEW 378
>gi|219841872|gb|AAI45563.1| Usp-ps protein [Mus musculus]
Length = 540
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 116/317 (36%), Positives = 183/317 (57%), Gaps = 16/317 (5%)
Query: 103 PTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHI 162
P G+G GL+N GN+C++NA LQC THT PL + S +H + C + EG C +CA+ H+
Sbjct: 79 PQGLGCGLQNTGNSCYLNAALQCLTHTPPLADYMLSQEHSQTC-CSPEG-CKMCAMEAHV 136
Query: 163 ELSL--ASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDE 220
SL SG ++ P ++ ++S F +YQQEDAHEFL L+ + CL + E
Sbjct: 137 TQSLLHTHSGDIMKPSQI------LTSAFHKYQQEDAHEFLMFTLETMHESCLQVHRQSE 190
Query: 221 SLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKL 280
+S+ + + +FGG S+++C C SDTY+P +D+ L+I S+ AL K
Sbjct: 191 P-TSEDSSPIHDIFGGWWRSQIKCLLCQGTSDTYDPFLDVPLDISSAQSVNQALWDTEKS 249
Query: 281 EKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE 340
E++ E + C +C++++ K L + P V LKRF K+D+ V +P
Sbjct: 250 EELHG-ENAYYCGRCRQKMPASKTLHVHIAPKVLLLVLKRFSAFTGN--KLDRKVSYPEF 306
Query: 341 LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVE 400
LDLKPY S Q + L Y LYA++ H G++ GHYF +++ W++++D++VTR +
Sbjct: 307 LDLKPYLS--QPTAGPLPYALYAVLVHDGATCHSGHYFCCVKAGHGKWYKMDDTKVTRCD 364
Query: 401 EEFVLSQDAYILFYAKQ 417
VL+++AY+LFY +Q
Sbjct: 365 VTSVLNENAYVLFYVQQ 381
>gi|326432192|gb|EGD77762.1| hypothetical protein PTSG_08851 [Salpingoeca sp. ATCC 50818]
Length = 1156
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 111/318 (34%), Positives = 178/318 (55%), Gaps = 6/318 (1%)
Query: 102 KPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDH 161
KP +GAGL NLGNTCF+NA LQC +T L S + R GF + + H
Sbjct: 106 KPRPMGAGLGNLGNTCFLNATLQCLAYTPALANFCLSGQYQR-THTPQPGFDAMKLVELH 164
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES 221
+ SL S + + P+ ++++L I+ F+ YQQ+DAHEF CLLD +++ L K+
Sbjct: 165 VHRSLTSPKRTVLPKGIINHLRQINKAFRHYQQQDAHEFFICLLDAMQTALL-GDYKNLD 223
Query: 222 LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLE 281
L Q ++ +FGG L S++QC C CS+T+E DLS++I+ SL AL+ F E
Sbjct: 224 LRVQETTVLHHIFGGYLRSQIQCVRCKHCSNTFESFFDLSIDIKAANSLTRALQQFVTKE 283
Query: 282 KIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLEL 341
+ + ++C CK +V KQL + ++P+V LKRF + K+ V +P++L
Sbjct: 284 LLFKTNS-YSCSGCKNKVPATKQLTIHRLPNVLCIQLKRFSFMSHFGSKLRHKVSYPMQL 342
Query: 342 DLKPYTSGGQNSDVEL---KYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTR 398
++ + S S + +Y LY ++ H+G++ + GHY +Y+R++ W+ +D V
Sbjct: 343 NVHEFLSRSIRSRISRGACRYELYGVLVHLGATLSSGHYIAYVRAANGMWYCADDDDVRF 402
Query: 399 VEEEFVLSQDAYILFYAK 416
+E VL+Q AY+LFY +
Sbjct: 403 SKENEVLNQAAYMLFYTR 420
>gi|444727772|gb|ELW68250.1| Ubiquitin carboxyl-terminal hydrolase 36 [Tupaia chinensis]
Length = 2413
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 123/372 (33%), Positives = 186/372 (50%), Gaps = 67/372 (18%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL NLGNTCF+N+ +QC T+T PL L S +H R C + FC++C +++HI +
Sbjct: 367 VGAGLHNLGNTCFLNSTVQCLTYTPPLANYLLSKEHARSCHQGS--FCMLCVMQNHITQA 424
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
A+SG + P + +L I+ F+ QEDAHEFL+ +D ++ CL+ K + +Q
Sbjct: 425 FANSGNAIKPVSFIRDLKKIARHFRFGSQEDAHEFLRYTIDAMQKACLNGCAKLDR-QTQ 483
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C C S SDTY+P +D++LEI ++ ALE F K + +
Sbjct: 484 ATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDIALEIRQAANIVRALELFVKPDVLSG 543
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKT-DGSYVVK-------------- 330
E + C +CK++V K+ + + +V LKRF G + K
Sbjct: 544 -ENAYMCARCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKVSVPIAVWSVQNQG 602
Query: 331 --IDKHVEFP-------------------------LELDLKPYT--SGG----------- 350
I HV P L L LK + SGG
Sbjct: 603 CFIQVHVPGPAQSWRGCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEF 662
Query: 351 --------QNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEE 402
Q+S + Y LYA++ H G S GHY+ Y+++S W+++NDS V +
Sbjct: 663 LNIRPYMSQSSGEPVMYGLYAVLVHSGYSCHAGHYYCYVKASSGQWYQMNDSLVHSSNVK 722
Query: 403 FVLSQDAYILFY 414
VL+Q AY+LFY
Sbjct: 723 VVLNQQAYVLFY 734
>gi|74140773|dbj|BAC40791.2| unnamed protein product [Mus musculus]
Length = 467
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 116/317 (36%), Positives = 183/317 (57%), Gaps = 16/317 (5%)
Query: 103 PTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHI 162
P G+G GL+N GN+C++NA LQC THT PL + S +H + C + EG C +CA+ H+
Sbjct: 46 PQGLGCGLQNTGNSCYLNAALQCLTHTPPLADYMLSQEHSQTC-CSPEG-CKMCAMEAHV 103
Query: 163 ELSL--ASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDE 220
SL SG ++ P ++ ++S F +YQQEDAHEFL L+ + CL + E
Sbjct: 104 TQSLLHTHSGDIMKPSQI------LTSAFHKYQQEDAHEFLMFTLETMHESCLQVHRQSE 157
Query: 221 SLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKL 280
+S+ + + +FGG S+++C C SDTY+P +D+ L+I S+ AL K
Sbjct: 158 P-TSEDSSPIHDIFGGWWRSQIKCLLCQGTSDTYDPFLDVPLDISSAQSVNQALWDTEKS 216
Query: 281 EKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE 340
E++ E + C +C++++ K L + P V LKRF K+D+ V +P
Sbjct: 217 EELHG-ENAYYCGRCRQKMPASKTLHVHIAPKVLLLVLKRFSAFTGN--KLDRKVSYPEF 273
Query: 341 LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVE 400
LDLKPY S Q + L Y LYA++ H G++ GHYF +++ W++++D++VTR +
Sbjct: 274 LDLKPYLS--QPTAGPLPYALYAVLVHDGATCHSGHYFCCVKAGHGKWYKMDDTKVTRCD 331
Query: 401 EEFVLSQDAYILFYAKQ 417
VL+++AY+LFY +Q
Sbjct: 332 VTSVLNENAYVLFYVQQ 348
>gi|395330004|gb|EJF62389.1| cysteine proteinase [Dichomitus squalens LYAD-421 SS1]
Length = 691
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 120/373 (32%), Positives = 193/373 (51%), Gaps = 28/373 (7%)
Query: 70 RDTRPISSSYGRYNWGSSLLSRPVEKHWPIQIKPTGVGAGLENLGNTCFINAILQCFTHT 129
+ T+P S S + + + + P+E WP KP VG GL N GNTCF+N+ LQC HT
Sbjct: 92 KATKPTSESPNHHKF---IYTGPIETSWPNVSKP--VGCGLGNTGNTCFLNSALQCLLHT 146
Query: 130 LPLVQALRSFDHPRPCDG--ATEGFCVICALRDHIELSLASSGKVLSPRKLVDNLNYISS 187
PL+ L HP C + C+IC LR ++ + P ++ L+ I+
Sbjct: 147 PPLLHILS--KHPESCHSPKSNNASCMICVLRQVMQDVFTKPHSTI-PYPVITKLHVIAK 203
Query: 188 FFQRYQQEDAHEFLQCLLDRLESCCLDS---------KTKDESLSSQGDNIVQRVFGGCL 238
+R +QED+HEFL+ +D L+ L + D L+ + V ++FGG L
Sbjct: 204 HMRRGRQEDSHEFLRYFVDALQRSALAGAPPRAEHRHRKVDPKLAEK--TWVYKIFGGLL 261
Query: 239 ISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQ 298
S++ C +CG SDT++ ++DLS++I V SL AL F ++ + + K+ CEKCK+
Sbjct: 262 RSRVSCLSCGYNSDTFDRMLDLSVDIAGVASLRDALRKFVAVDHLRGAD-KYKCEKCKKP 320
Query: 299 VSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELK 358
V+ +KQ + + P+V HLKRF G KI + + L L+P+ S G
Sbjct: 321 VNADKQFTIHEAPAVLTVHLKRFSPMGR---KIAIPIRYDERLSLEPFMSEGSFGP---N 374
Query: 359 YHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQG 418
Y LY ++ H G+ P GHY+++++ + WH +ND V + ++AYILFY +
Sbjct: 375 YTLYGVISHAGNGPNSGHYYAHVKGANGRWHEMNDDYVAPLSGVPTSLKNAYILFYILEK 434
Query: 419 TEWVSSLLEAESI 431
+ + + L ++
Sbjct: 435 GQALEAALAPRAV 447
>gi|426358757|ref|XP_004046661.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Gorilla
gorilla gorilla]
Length = 530
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 116/321 (36%), Positives = 182/321 (56%), Gaps = 17/321 (5%)
Query: 102 KPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDH 161
+P VGAGL+N+GNTC++NA LQC T+T PL + S +H + C C++C ++ H
Sbjct: 74 RPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCH--RHKGCMLCTMQAH 131
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES 221
I +L G V+ P + +++ F R +QEDAHEFL +D ++ CL K
Sbjct: 132 ITRALYRPGHVIQPSQA------LAAGFHRGKQEDAHEFLMFTVDAMKKACLPGH-KQVD 184
Query: 222 LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLE 281
S+ ++ ++FGG S+++C +C SDT++P +D++L+I+ S+ ALE K E
Sbjct: 185 HHSKDTTLIHQIFGGYWRSEIKCLHCHGMSDTFDPYLDIALDIQAAQSVKQALEQLVKPE 244
Query: 282 KIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK-TDGSYVVKIDKHVEFPLE 340
++ + E + C C ++ K L L V LKRF G+ K+ K+V++P
Sbjct: 245 EL-NGENAYHCALCLQKAPASKTLTLHTSAKVLILVLKRFSDVTGN---KLAKNVQYPEC 300
Query: 341 LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVE 400
LD++PY S Q + L Y LYA++ H G S GHYFSY+++ W++++D+ VT
Sbjct: 301 LDMQPYMS--QQNTGPLVYVLYAVLVHTGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASG 358
Query: 401 EEFVLSQDAYILFYAKQGTEW 421
LSQ AY+LFY Q +EW
Sbjct: 359 ITSALSQQAYVLFYI-QKSEW 378
>gi|357117231|ref|XP_003560376.1| PREDICTED: uncharacterized protein LOC100846465 [Brachypodium
distachyon]
Length = 1046
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 122/314 (38%), Positives = 181/314 (57%), Gaps = 12/314 (3%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL N GN+CF N +LQC + T PLV L DH R C E +C +C L+ HI+ +
Sbjct: 204 GLVNCGNSCFANVVLQCLSCTRPLVAYLLWKDHARECSRRHEDWCFLCELQSHIQKA-TD 262
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLD--SKTKDESLSSQG 226
S +P K++ +L I +QEDAHEF++ +D+++S CLD K LS Q
Sbjct: 263 SLHPFAPMKILSHLPNIGGNLGFGKQEDAHEFMRFAIDKMQSACLDEFGGEKVVDLSIQE 322
Query: 227 DNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE-DVGSLGSALESFTKLEKIED 285
I+Q +FGG L S++QC CG S+ YE ++DL++EI D SL L FT +E + D
Sbjct: 323 TTIIQHIFGGRLRSQVQCTACGMVSNRYENMMDLTVEIHGDAESLEECLNQFTAVEWL-D 381
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
+ K+ C+ C + V +K L + + P++ LKRF++ G Y K++K V FP +LDL
Sbjct: 382 GDNKYRCDGCSDYVKAQKHLTVHQAPNILTITLKRFQS-GRY-GKLNKRVTFPTKLDLTR 439
Query: 346 YTSGGQNSDVELKYHLYAIVEH--MGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
Y S SD +Y LYA+V H M ++ GHY YI+ W +++D +V V+EE
Sbjct: 440 YMSTTDGSD---QYDLYAVVVHLDMMNASYFGHYICYIKDFRGRWRKVDDCKVMIVDEEE 496
Query: 404 VLSQDAYILFYAKQ 417
V +Q AY+L Y+++
Sbjct: 497 VHAQGAYMLLYSRR 510
>gi|440897206|gb|ELR48950.1| Ubiquitin carboxyl-terminal hydrolase 17-like protein 6, partial
[Bos grunniens mutus]
Length = 334
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 117/305 (38%), Positives = 174/305 (57%), Gaps = 14/305 (4%)
Query: 113 LGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLASSGKV 172
LGNTC++NA LQC +HT PL + S H C + C +CA+R H+ +L +G+V
Sbjct: 1 LGNTCYVNAGLQCLSHTPPLASWMVSQQHATLCPARSA--CTLCAMRAHVTRALLHAGEV 58
Query: 173 LSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDNIVQR 232
+ PRK D L + F R+QQEDAHEFL L+ ++ CL S ++ +S+ ++++
Sbjct: 59 IRPRK--DLL----AGFHRHQQEDAHEFLMFTLNAMQQGCL-SASQPSGHASEDTTVIRQ 111
Query: 233 VFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIEDPETKFTC 292
+FGG S++QC C SDT++P +D+SL+I S+ AL K EK+ D + + C
Sbjct: 112 IFGGTWRSQIQCLRCLGVSDTFDPYLDISLDITAAQSVEQALRELVKPEKL-DADNAYDC 170
Query: 293 EKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPYTSGGQN 352
C +V K+L L V LKRF K + V +P LDL+PYTS +
Sbjct: 171 GVCLRKVPATKRLTLHSTSQVLVLVLKRFTPVSG--AKRAQEVRYPQCLDLQPYTS--ER 226
Query: 353 SDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYIL 412
L Y LYA++ H G S GHYF Y+R+ W++++D++VT +E LSQ AY+L
Sbjct: 227 KAGPLGYVLYAVLVHSGWSCERGHYFCYVRAGNGQWYKMDDAKVTACDETAALSQSAYVL 286
Query: 413 FYAKQ 417
FYA++
Sbjct: 287 FYARE 291
>gi|112983634|ref|NP_001001559.2| deubiquitinating enzyme 2a [Mus musculus]
gi|148684706|gb|EDL16653.1| mCG124600 [Mus musculus]
gi|148922521|gb|AAI46299.1| Deubiquitinating enzyme 2a [synthetic construct]
gi|151555365|gb|AAI48744.1| Deubiquitinating enzyme 2a [synthetic construct]
Length = 545
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 115/317 (36%), Positives = 184/317 (58%), Gaps = 16/317 (5%)
Query: 103 PTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHI 162
P G G GL+N GN+C++NA LQC THT PL + S ++ + C + EG C +CA+ H+
Sbjct: 46 PQGPGCGLQNTGNSCYLNAALQCLTHTPPLADYMLSQEYSQTC-CSPEG-CKMCAMEAHV 103
Query: 163 ELSL--ASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDE 220
SL + SG V+ P ++ ++S F ++QQEDAHEFL L+ + CL + E
Sbjct: 104 TQSLLHSHSGDVMKPSQI------LTSAFHKHQQEDAHEFLMFTLETMHESCLQVHRQSE 157
Query: 221 SLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKL 280
+S+ + + +FGG S+++C +C SDTY+ +D+ L+I S+ AL K
Sbjct: 158 P-TSEDSSPIHDIFGGLWRSQIKCLHCQGTSDTYDRFLDVPLDISSAQSVNQALWDTEKS 216
Query: 281 EKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE 340
E++ E + C +C++++ K L + P V LKRF K+D+ V +P
Sbjct: 217 EELRG-ENAYYCGRCRQKMPASKTLHIHSAPKVLLLVLKRF--SAFMGNKLDRKVSYPEF 273
Query: 341 LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVE 400
LDLKPY S Q + L Y LYA++ H G++ GHYFSY+++ W++++D++VT +
Sbjct: 274 LDLKPYLS--QPTGGPLPYALYAVLVHEGATCHSGHYFSYVKAGHGKWYKMDDTKVTSCD 331
Query: 401 EEFVLSQDAYILFYAKQ 417
VL+++AY+LFY +Q
Sbjct: 332 VTSVLNENAYVLFYVQQ 348
>gi|14994718|gb|AAK77003.1| deubiquitinating enzyme 2A [Mus musculus]
Length = 545
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 115/317 (36%), Positives = 184/317 (58%), Gaps = 16/317 (5%)
Query: 103 PTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHI 162
P G G GL+N GN+C++NA LQC THT PL + S ++ + C + EG C +CA+ H+
Sbjct: 46 PQGPGCGLQNTGNSCYLNAALQCLTHTPPLADYMLSQEYSQTC-CSPEG-CKMCAMEAHV 103
Query: 163 ELSL--ASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDE 220
SL + SG V+ P ++ ++S F ++QQEDAHEFL L+ + CL + E
Sbjct: 104 TQSLLHSHSGDVMKPSQI------LTSAFHKHQQEDAHEFLMFTLETMHESCLQVHRQSE 157
Query: 221 SLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKL 280
+S+ + + +FGG S+++C +C SDTY+ +D+ L+I S+ AL K
Sbjct: 158 P-TSEDSSPIHDIFGGLWRSQIKCLHCQGTSDTYDRFLDVPLDISSAQSVNQALWDTEKS 216
Query: 281 EKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE 340
E++ E + C +C++++ K L + P V LKRF K+D+ V +P
Sbjct: 217 EELRG-ENAYYCGRCRQKMPASKTLHIHSAPKVLLLVLKRF--SAFMGNKLDRKVSYPEF 273
Query: 341 LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVE 400
LDLKPY S Q + L Y LYA++ H G++ GHYFSY+++ W++++D++VT +
Sbjct: 274 LDLKPYLS--QPTGGPLPYALYAVLVHEGATCHSGHYFSYVKAGHGKWYKMDDTKVTSCD 331
Query: 401 EEFVLSQDAYILFYAKQ 417
VL+++AY+LFY +Q
Sbjct: 332 VTSVLNENAYVLFYVQQ 348
>gi|255086819|ref|XP_002509376.1| predicted protein [Micromonas sp. RCC299]
gi|226524654|gb|ACO70634.1| predicted protein [Micromonas sp. RCC299]
Length = 383
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 123/338 (36%), Positives = 184/338 (54%), Gaps = 16/338 (4%)
Query: 93 VEKHWPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDH----PRPCDGA 148
+ WP K VG+GL NLGNTCF+NA++QC THT L +H P+ +G
Sbjct: 51 IRMEWPTVRK---VGSGLANLGNTCFMNAVMQCLTHTPALAAFCLDGEHRRFRPKGGNGG 107
Query: 149 TEGFCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRL 208
F I + +H+ +LA +V+SP V NL IS F++ +QEDAHEF +CLLD +
Sbjct: 108 GGSFSAIYEMGEHVCRALAGERRVVSPSAFVKNLRSISKTFRKGRQEDAHEFARCLLDAM 167
Query: 209 -ESCCLDSKTKDESLSSQGDN-IVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIED 266
E C ++ K S + + V +VFGG L S++ C CG SDT++ +DLSL+I
Sbjct: 168 HEKCVEHARPKPPKNSPRAETTFVFQVFGGRLRSQVTCKTCGRKSDTFDSFMDLSLDIAK 227
Query: 267 VGSLGSALESFTKLEKIEDPETKFTCEKCKEQ---VSVEKQLMLDKVPSVAAFHLKRFKT 323
S+ +AL+ + +E + D K+ CE + KQ +D P V LKRF+
Sbjct: 228 AKSVEAALKRYVAVE-VLDGSNKYKCEMGGGKPHMTRATKQFTIDAAPLVLTVQLKRFEY 286
Query: 324 DGSYVVKIDKHVEFPLELDLKPYTSGG--QNSDVELKYHLYAIVEHMGSSPTCGHYFSYI 381
K+ + VE+P LD+ S + VE KY L+A++ H G S GHY+ Y+
Sbjct: 287 VPFGRGKLTQFVEYPTSLDITGAMSDANPKARGVE-KYSLFAVLVHAGGSMHSGHYYCYV 345
Query: 382 RSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGT 419
+++ W+ ++D V+ E L+Q AY+LFYA++GT
Sbjct: 346 KAATGVWYEMDDEGVSATSERTALNQKAYLLFYAREGT 383
>gi|2739431|gb|AAB95194.1| hematopoietic-specific IL-2 deubiquitinating enzyme [Mus musculus]
Length = 545
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 115/317 (36%), Positives = 184/317 (58%), Gaps = 16/317 (5%)
Query: 103 PTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHI 162
P G G GL+N GN+C++NA LQC THT PL + S ++ + C + EG C +CA+ H+
Sbjct: 46 PQGPGCGLQNTGNSCYLNAALQCLTHTPPLADYMLSQEYSQTC-CSPEG-CKMCAMEAHV 103
Query: 163 ELSL--ASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDE 220
SL + SG V+ P ++ ++S F ++QQEDAHEFL L+ + CL + E
Sbjct: 104 TQSLLHSHSGDVMKPSQI------LTSAFHKHQQEDAHEFLMFTLETMHESCLQVHRQSE 157
Query: 221 SLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKL 280
+S+ + + +FGG S+++C +C SDTY+ +D+ L+I S+ AL K
Sbjct: 158 P-TSEDSSPIHDIFGGLWRSQIKCLHCQGTSDTYDRFLDVPLDISSAQSVNQALWDTEKS 216
Query: 281 EKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE 340
E++ E + C +C++++ K L + P V LKRF K+D+ V +P
Sbjct: 217 EELRG-ENAYYCGRCRQKMPASKTLHIHSAPKVLLLVLKRF--SAFMGNKLDRKVSYPEF 273
Query: 341 LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVE 400
LDLKPY S Q + L Y LYA++ H G++ GHYFSY+++ W++++D++VT +
Sbjct: 274 LDLKPYLS--QPTGGPLPYALYAVLVHEGATCHSGHYFSYVKARHGAWYKMDDTKVTSCD 331
Query: 401 EEFVLSQDAYILFYAKQ 417
VL+++AY+LFY +Q
Sbjct: 332 VTSVLNENAYVLFYVQQ 348
>gi|2739433|gb|AAB94636.1| hematopoietic-specific IL-2 deubiquitinating enzyme [Mus musculus]
Length = 545
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 115/317 (36%), Positives = 184/317 (58%), Gaps = 16/317 (5%)
Query: 103 PTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHI 162
P G G GL+N GN+C++NA LQC THT PL + S ++ + C + EG C +CA+ H+
Sbjct: 46 PQGPGCGLQNTGNSCYLNAALQCLTHTPPLADYMLSQEYSQTC-CSPEG-CKMCAMEAHV 103
Query: 163 ELSL--ASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDE 220
SL + SG V+ P ++ ++S F ++QQEDAHEFL L+ + CL + E
Sbjct: 104 TQSLLHSHSGDVMKPSQI------LTSAFHKHQQEDAHEFLMFTLETMHESCLQVHRQSE 157
Query: 221 SLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKL 280
+S+ + + +FGG S+++C +C SDTY+ +D+ L+I S+ AL K
Sbjct: 158 P-TSEDSSPIHDIFGGLWRSQIKCLHCQGTSDTYDRFLDVPLDISSAQSVNQALWDTEKS 216
Query: 281 EKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE 340
E++ E + C +C++++ K L + P V LKRF K+D+ V +P
Sbjct: 217 EELRG-ENAYYCGRCRQKMPASKTLHIHSAPKVLLLVLKRF--SAFMGNKLDRKVSYPEF 273
Query: 341 LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVE 400
LDLKPY S Q + L Y LYA++ H G++ GHYFSY+++ W++++D++VT +
Sbjct: 274 LDLKPYLS--QPTGGPLPYALYAVLVHEGATCHSGHYFSYVKARHGAWYKMDDTKVTSCD 331
Query: 401 EEFVLSQDAYILFYAKQ 417
VL+++AY+LFY +Q
Sbjct: 332 VTSVLNENAYVLFYVQQ 348
>gi|426358866|ref|XP_004046711.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Gorilla
gorilla gorilla]
Length = 530
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 115/321 (35%), Positives = 181/321 (56%), Gaps = 17/321 (5%)
Query: 102 KPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDH 161
+P VGAGL+N+GNTC++NA LQC T+T PL + S +H + C C++C ++ H
Sbjct: 74 RPAAVGAGLQNMGNTCYVNASLQCLTYTPPLASYMLSPEHSQTCH--RHKGCMLCTMQAH 131
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES 221
+ +L G V+ P + +++ F R +QEDAHEFL +D ++ CL K
Sbjct: 132 VTRALYRPGHVIQPSQA------LAAGFHRGKQEDAHEFLMFAVDAMKKACLPGH-KQVD 184
Query: 222 LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLE 281
S ++ ++FGG S+++C +C SDT++P +D++L+I+ S+ ALE K E
Sbjct: 185 HHSNDTTLIHQIFGGYWRSQIRCLHCHGISDTFDPYLDIALDIQAAQSVKQALEQLVKPE 244
Query: 282 KIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK-TDGSYVVKIDKHVEFPLE 340
++ + E + C C ++ K L L V LKRF G+ K+ K+V++P
Sbjct: 245 EL-NGENAYQCGLCLQKAPASKTLTLHTSAKVLILVLKRFSDVTGN---KLAKNVQYPEC 300
Query: 341 LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVE 400
LD++PY S Q + L Y LYA++ H G S GHY SY+++ W++++D+ VT
Sbjct: 301 LDMQPYMS--QQNTGPLVYVLYAVLVHAGWSCHSGHYLSYVKAQEGQWYKMDDAEVTASG 358
Query: 401 EEFVLSQDAYILFYAKQGTEW 421
VLSQ AY+LFY Q +EW
Sbjct: 359 ITSVLSQQAYVLFYI-QKSEW 378
>gi|119964688|ref|NP_034219.3| deubiquitinating enzyme 2 [Mus musculus]
gi|148684713|gb|EDL16660.1| mCG122921 [Mus musculus]
gi|157169780|gb|AAI52900.1| Deubiquitinating enzyme 2 [synthetic construct]
Length = 545
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 115/317 (36%), Positives = 184/317 (58%), Gaps = 16/317 (5%)
Query: 103 PTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHI 162
P G G GL+N GN+C++NA LQC THT PL + S ++ + C + EG C +CA+ H+
Sbjct: 46 PQGPGCGLQNTGNSCYLNAALQCLTHTPPLADYMLSQEYSQTC-CSPEG-CKMCAMEAHV 103
Query: 163 ELSL--ASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDE 220
SL + SG V+ P ++ ++S F ++QQEDAHEFL L+ + CL + E
Sbjct: 104 TQSLLHSHSGDVMKPSQI------LTSAFHKHQQEDAHEFLMFTLETMHESCLQVHRQSE 157
Query: 221 SLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKL 280
+S+ + + +FGG S+++C +C SDTY+ +D+ L+I S+ AL K
Sbjct: 158 P-TSEDSSPIHDIFGGLWRSQIKCLHCQGTSDTYDRFLDVPLDISSAQSVNQALWDTEKS 216
Query: 281 EKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE 340
E++ E + C +C++++ K L + P V LKRF K+D+ V +P
Sbjct: 217 EELRG-ENAYYCGRCRQKMPASKTLHIHSAPKVLLLVLKRF--SAFMGNKLDRKVSYPEF 273
Query: 341 LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVE 400
LDLKPY S Q + L Y LYA++ H G++ GHYFSY+++ W++++D++VT +
Sbjct: 274 LDLKPYLS--QPTGGPLPYALYAVLVHEGATCHSGHYFSYVKARHGAWYKMDDTKVTSCD 331
Query: 401 EEFVLSQDAYILFYAKQ 417
VL+++AY+LFY +Q
Sbjct: 332 VTSVLNENAYVLFYVQQ 348
>gi|297273759|ref|XP_001108648.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like [Macaca
mulatta]
Length = 1122
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 115/322 (35%), Positives = 175/322 (54%), Gaps = 31/322 (9%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL NLGNTCF+NA +QC T+T PL L S +H R C + FC++C +++HI +
Sbjct: 120 VGAGLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGS--FCMLCVMQNHIVQA 177
Query: 166 LASSGKVLSPRKLVDNLN-----------YISSFFQRYQQEDAHEFLQCLLDRLESCCLD 214
A+SG + P + +L ++ + Y Q H + LL LD
Sbjct: 178 FANSGNAIKPVSFIRDLKNDGGVVGVVWILAATITRSYPQFSVHTEIPSLL------VLD 231
Query: 215 SKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSAL 274
+T Q +V ++FGG L S+++C C S SDTY+P +D++LEI ++ AL
Sbjct: 232 RQT-------QATTLVHQIFGGYLRSRVKCSMCKSVSDTYDPYLDVALEIRQAANIVRAL 284
Query: 275 ESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKH 334
E F K + + E + C KCK++V K+ + + +V LKRF KI K
Sbjct: 285 ELFVKADVLSG-ENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGG--KITKD 341
Query: 335 VEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDS 394
V +P L+++PY S QN+ + Y LYA++ H G S GHY+ Y+++S W+++NDS
Sbjct: 342 VGYPEFLNIRPYMS--QNNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDS 399
Query: 395 RVTRVEEEFVLSQDAYILFYAK 416
V + VL+Q AY+LFY +
Sbjct: 400 LVHSSNVKVVLNQQAYVLFYLR 421
>gi|332244679|ref|XP_003271501.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like isoform 1 [Nomascus leucogenys]
gi|332267671|ref|XP_003282805.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Nomascus leucogenys]
gi|441611210|ref|XP_004088001.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like isoform 2 [Nomascus leucogenys]
Length = 529
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 119/336 (35%), Positives = 187/336 (55%), Gaps = 21/336 (6%)
Query: 103 PTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHI 162
P VGAGL+N+GNTC++NA LQC T+T PL + S +H + C C++C ++ HI
Sbjct: 75 PAAVGAGLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCH--RHKCCMLCTMQAHI 132
Query: 163 ELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESL 222
+L G V+ P + +++ F R +QEDAHEFL +D + CL K
Sbjct: 133 TRALHRPGHVIQPSQA------LAAGFHRGKQEDAHEFLMFTVDAMRKACLPGH-KQVDP 185
Query: 223 SSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEK 282
S+ ++ ++FGG S+++C +C SDT++P +D++L+I+ S+ ALE K E+
Sbjct: 186 HSKDTTLIHQIFGGYWRSQIKCLHCQGISDTFDPYLDIALDIQAAQSVKQALEQLVKPEE 245
Query: 283 IEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK-TDGSYVVKIDKHVEFPLEL 341
+ + E + C C ++ K L L V LKRF G+ K+ K+V++P L
Sbjct: 246 L-NGENAYHCGLCLQKAPASKTLTLHTSAKVLILVLKRFSDVTGN---KLAKNVQYPECL 301
Query: 342 DLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEE 401
D++PY S Q + L Y LYA++ H G S GHYFSY+++ W++++D+ VT
Sbjct: 302 DMQPYMS--QQNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASGI 359
Query: 402 EFVLSQDAYILFYAKQG-----TEWVSSLLEAESIG 432
VLSQ AY+LFY ++ +E VS E ++G
Sbjct: 360 TSVLSQQAYVLFYIQKSELERHSEGVSRGREPRALG 395
>gi|402912553|ref|XP_003918821.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Papio anubis]
Length = 529
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 113/317 (35%), Positives = 180/317 (56%), Gaps = 16/317 (5%)
Query: 102 KPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDH 161
+P VGAGL+N+GNTC++NA LQC T+T PL + S +H + C C++C + H
Sbjct: 74 RPAAVGAGLQNMGNTCYMNASLQCLTYTPPLANYMLSQEHSQLCH--RHKCCMLCTMEAH 131
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES 221
I +L G V+ P + +++ F R +QEDAHEFL ++D ++ CL K
Sbjct: 132 ITRALHCPGHVIQPSQA------LAAGFHRGKQEDAHEFLMFIVDAMKKACLPGH-KQAD 184
Query: 222 LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLE 281
S+ ++ ++FGGC S+++C +C SDT++P +D++L+I+ S+ ALE K E
Sbjct: 185 HDSEDTTLIHQIFGGCWRSQIKCLHCQGVSDTFDPYLDIALDIQAAQSVKQALEQVVKPE 244
Query: 282 KIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK-TDGSYVVKIDKHVEFPLE 340
++ + E + C C ++ K L V LKRF G+ K+ K+V++P
Sbjct: 245 EL-NGENAYHCGLCLQKAPASKTFTLHTSAKVLILVLKRFSDVTGN---KLAKNVQYPEC 300
Query: 341 LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVE 400
LD++PY S Q + L Y LYA++ H G S GHY SY+++ W++++D+ VT
Sbjct: 301 LDIQPYMS--QQNTGPLVYVLYAVLVHAGWSCHNGHYLSYVKAPGGQWYKMDDAEVTACS 358
Query: 401 EEFVLSQDAYILFYAKQ 417
VLSQ AY+LFY ++
Sbjct: 359 IASVLSQQAYVLFYIQK 375
>gi|332244521|ref|XP_003271421.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Nomascus leucogenys]
Length = 529
Score = 208 bits (530), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 119/336 (35%), Positives = 187/336 (55%), Gaps = 21/336 (6%)
Query: 103 PTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHI 162
P VGAGL+N+GNTC++NA LQC T+T PL + S +H + C C++C ++ HI
Sbjct: 75 PAAVGAGLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCH--RHKCCMLCTMQAHI 132
Query: 163 ELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESL 222
+L G V+ P + +++ F R +QEDAHEFL +D + CL K
Sbjct: 133 TRALHRPGDVIQPSQA------LAAGFHRGKQEDAHEFLMFTVDAMRKACLPGH-KQVDP 185
Query: 223 SSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEK 282
S+ ++ ++FGG S+++C +C SDT++P +D++L+I+ S+ ALE K E+
Sbjct: 186 HSKDTTLIHQIFGGYWRSQIKCLHCQGISDTFDPYLDIALDIQAAQSVKQALEQLVKPEE 245
Query: 283 IEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK-TDGSYVVKIDKHVEFPLEL 341
+ + E + C C ++ K L L V LKRF G+ K+ K+V++P L
Sbjct: 246 L-NGENAYHCGLCLQKAPASKTLTLHTSAKVLILVLKRFSDVTGN---KLAKNVQYPECL 301
Query: 342 DLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEE 401
D++PY S Q + L Y LYA++ H G S GHYFSY+++ W++++D+ VT
Sbjct: 302 DMQPYMS--QQNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASGI 359
Query: 402 EFVLSQDAYILFYAKQG-----TEWVSSLLEAESIG 432
VLSQ AY+LFY ++ +E VS E ++G
Sbjct: 360 TSVLSQQAYVLFYIQKSELERHSEGVSRGREPRALG 395
>gi|402912282|ref|XP_003918703.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Papio anubis]
gi|402912555|ref|XP_003918822.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Papio anubis]
Length = 529
Score = 208 bits (530), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 113/317 (35%), Positives = 180/317 (56%), Gaps = 16/317 (5%)
Query: 102 KPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDH 161
+P VGAGL+N+GNTC++NA LQC T+T PL + S +H + C C++C + H
Sbjct: 74 RPAAVGAGLQNMGNTCYMNASLQCLTYTPPLANYMLSQEHSQLCH--RHKCCMLCTMEAH 131
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES 221
I +L G V+ P + +++ F R +QEDAHEFL ++D ++ CL K
Sbjct: 132 ITRALHCPGHVIQPSQA------LAAGFHRGKQEDAHEFLMFIVDAMKKACLPGH-KQVD 184
Query: 222 LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLE 281
S+ ++ ++FGGC S+++C +C SDT++P +D++L+I+ S+ ALE K E
Sbjct: 185 HDSEDTTLIHQIFGGCWRSQIKCLHCQGVSDTFDPYLDIALDIQAAQSVKQALEQVVKPE 244
Query: 282 KIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK-TDGSYVVKIDKHVEFPLE 340
++ + E + C C ++ K L V LKRF G+ K+ K+V++P
Sbjct: 245 EL-NGENAYHCGLCLQKAPASKTFTLHTSAKVLILVLKRFSDVTGN---KLAKNVQYPEC 300
Query: 341 LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVE 400
LD++PY S Q + L Y LYA++ H G S GHY SY+++ W++++D+ VT
Sbjct: 301 LDIQPYMS--QQNTGPLVYVLYAVLVHAGWSCHNGHYLSYVKAPGGQWYKMDDAEVTACS 358
Query: 401 EEFVLSQDAYILFYAKQ 417
VLSQ AY+LFY ++
Sbjct: 359 IASVLSQQAYVLFYIQK 375
>gi|343427156|emb|CBQ70684.1| related to ubiquitin carboxyl-terminal hydrolase 36 [Sporisorium
reilianum SRZ2]
Length = 761
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 140/471 (29%), Positives = 227/471 (48%), Gaps = 45/471 (9%)
Query: 93 VEKHWPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFD----HPRPCDGA 148
V +P +++ GV GL N GNTC++N+++Q HT PL AL + D H
Sbjct: 185 VSLRFPGKVR--GVATGLANYGNTCYMNSVMQSLIHTPPLAFALLTQDLDALHGELGGKP 242
Query: 149 TEGFCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRL 208
F + A+ SL S +P++ NL + ++ +QEDAHE+L+ LL+ L
Sbjct: 243 NATFDAVTAMHAFTRASLMGSKPTNAPKEFNRNLKAFAKPLRQGRQEDAHEYLRFLLEAL 302
Query: 209 ESCCLDSKTK----DESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEI 264
+ CL +K D+ + + VQ++FGG L S++ C +CG SDT++P +DLSLE+
Sbjct: 303 QQSCLARASKSLKPDDPI--RRTTFVQKMFGGKLRSRVTCHSCGHNSDTFDPFMDLSLEV 360
Query: 265 -EDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKT 323
+ + SL A +F + + E K+ C+KCK +V KQ ++ P HLKRF
Sbjct: 361 RKGITSLTDAFRAFVAKDHLTGSE-KYKCDKCKRKVDATKQFTIEAAPPALTVHLKRFTA 419
Query: 324 DGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRS 383
G K+ + + F L++ PY S + +Y LYA+V H GS P GHY + +RS
Sbjct: 420 FGG---KVSRQINFDESLNIAPYLSVNRG---PARYKLYAVVHHYGSGPNSGHYVASVRS 473
Query: 384 SPDTWHRLNDSRVTRVEEEFVLS-QDAYILFYAKQGTEWVSSLLEAESIGMNADISNSSP 442
W R++DS V+ + L+ Q AYILFY K+ E + + A + + + + +SP
Sbjct: 474 PSGKWTRMDDSLVSEMGRSGPLNDQSAYILFYMKEKDEALDKAI-AAATSVKSPMVKASP 532
Query: 443 KSVLDNVENDYTSRSGVANAESCKANEPSASAGDSSTKFSCQLRSIDLEVNETRDTVKGM 502
S + D ++ + + +A R+I +K
Sbjct: 533 ASPASQLVGDKKRKAVSESESDSDSVGGDDAADADGFDDDAAYRAI----------LKRR 582
Query: 503 SACFTLASCRNAAEHETRDNTP-------MIDD--ASRPLSASDFYGVFCN 544
A A+ +N E E+ ++P +D +S+P S++ FYG N
Sbjct: 583 KA----AAAKNTGEEESDSDSPPPRTPGQKLDQMLSSKPKSSASFYGARSN 629
>gi|330840214|ref|XP_003292114.1| hypothetical protein DICPUDRAFT_156792 [Dictyostelium purpureum]
gi|325077668|gb|EGC31366.1| hypothetical protein DICPUDRAFT_156792 [Dictyostelium purpureum]
Length = 413
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 115/335 (34%), Positives = 189/335 (56%), Gaps = 22/335 (6%)
Query: 104 TGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIE 163
T +GAGL N+GNTCF+N++LQC T++ L + S +H + C + FC+ C++ HI
Sbjct: 7 TNIGAGLYNIGNTCFMNSVLQCLTYSPALANYMISGEHSKNC--TNKSFCIFCSIEIHII 64
Query: 164 LSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLS 223
S ++GK +P + N+ ++ F+ +QED+HEF ++D L+ CL SK S+S
Sbjct: 65 ASHKATGKATTPLVIAKNIEKVAPTFRIGRQEDSHEFFCFVIDSLQKVCL-SKFPKGSIS 123
Query: 224 SQGD--NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLE 281
+ ++ +FGG L S+++C C S+T++ +DL +EI SL L++F K E
Sbjct: 124 PRDSMTTVIGSIFGGYLRSQVKCTVCQYESNTFDEFMDLCVEINQANSLTKGLQNFVKPE 183
Query: 282 KIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLEL 341
I D E + C+KC + V EK L ++ P V +KRF SY K +KH++F L
Sbjct: 184 -ILDGENGYKCKKCNKLVKAEKSLQIEISPPVLTVQIKRFSFLNSYGGKDNKHIQFGQTL 242
Query: 342 DLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEE 401
DL PY + Q +D + Y L +++ H+G S GHY+ Y++ S W++++DS V++
Sbjct: 243 DLSPYMT--QKNDYSI-YDLNSVLVHLGDSANSGHYYCYVKGSNGVWYKMDDSMVSQ--- 296
Query: 402 EFVLSQDAYILFYAKQGTEW---VSSLLEAESIGM 433
AY +FY K TE +S++ ++G+
Sbjct: 297 -------AYNVFYTKGYTERSINTNSVIPKNTLGL 324
>gi|71005508|ref|XP_757420.1| hypothetical protein UM01273.1 [Ustilago maydis 521]
gi|46096903|gb|EAK82136.1| hypothetical protein UM01273.1 [Ustilago maydis 521]
Length = 756
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 118/342 (34%), Positives = 183/342 (53%), Gaps = 21/342 (6%)
Query: 97 WPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFD----HPRPCDGATEGF 152
+P +++ GV GL N GNTC++N+++Q HT PL AL + D H F
Sbjct: 191 FPGKVR--GVATGLSNYGNTCYMNSVMQSLIHTPPLAFALLTQDLDALHGELGGKPNVAF 248
Query: 153 CVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCC 212
+ A++ + SL S +PR NL + ++ +QEDAHE+L+ LL+ L+ C
Sbjct: 249 DAVAAMQTFAKGSLMGSKPTNAPRDFNRNLKAFARPLRQGRQEDAHEYLRFLLEALQQGC 308
Query: 213 LDSKTK----DESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEI-EDV 267
L +K D+ + + + VQ++FGG L S++ C CG SDT++P +DLSL++ + +
Sbjct: 309 LSRASKSLKPDDPI--RATSFVQKIFGGKLRSRVTCHKCGHNSDTFDPFMDLSLDVRKGI 366
Query: 268 GSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSY 327
SL A +F +++ E K+ C+KCK +V KQ ++ P HLKRF G
Sbjct: 367 NSLTDAFRAFVAKDQLTGSE-KYKCDKCKRKVDATKQFTIETAPPALTVHLKRFSPFGG- 424
Query: 328 VVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDT 387
KI + V F +L++ PY S ++Y LYA+V H GS P GHY + +RS
Sbjct: 425 --KISRQVAFDEKLNIAPYLSVNHG---PVRYKLYAVVHHYGSGPNSGHYVASVRSPFGK 479
Query: 388 WHRLNDSRVTRVEEEFVLS-QDAYILFYAKQGTEWVSSLLEA 428
W R++DS V+ + L Q AYILFY K+ + + + A
Sbjct: 480 WTRMDDSHVSEMGSSGPLGDQSAYILFYLKEKDDALEKAIAA 521
>gi|353234548|emb|CCA66572.1| related to ubiquitin carboxyl-terminal hydrolase 36 [Piriformospora
indica DSM 11827]
Length = 701
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 117/329 (35%), Positives = 184/329 (55%), Gaps = 14/329 (4%)
Query: 93 VEKHWPIQIKP-TGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEG 151
+ + W I+ P + + GL NLGN+CF+N+ LQ HT PL+ L S H C A +G
Sbjct: 119 LSQEWKIEKVPISALDCGLHNLGNSCFMNSTLQILLHTAPLLNVLLSHRHDS-CKLALDG 177
Query: 152 -FCVICALRD-HIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLE 209
+C C LR +++ S + SP + NL IS ++Y+QEDAHEFL+ +D L+
Sbjct: 178 SYCFTCQLRKLALDILCRKSRQARSPEDIFRNLKRISPTLRQYRQEDAHEFLRFSIDALQ 237
Query: 210 SCCLDS-KTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVG 268
+ K+ E L++ + V R+FGG S++ C +CG SDT++ L+DLS++I
Sbjct: 238 LSAQNGVKSVPEKLAAT--SWVYRLFGGQFRSRVTCGSCGHNSDTFDTLLDLSVDIAKCD 295
Query: 269 SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYV 328
+L AL F+ +E++E K+ CEKCK+ V+ +KQ+ + K P LKRF G
Sbjct: 296 TLKQALRMFSAIERLEG-SNKYKCEKCKKPVNAKKQITVHKAPMALCIQLKRFSPWGR-- 352
Query: 329 VKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTW 388
KI +++P L L S Q S + Y LY ++ H GS P GHY++++++ W
Sbjct: 353 -KITNMIDYPETLSLNEILSDNQTSPM---YQLYGVIVHAGSGPNSGHYYTFVKNYAGKW 408
Query: 389 HRLNDSRVTRVEEEFVLSQDAYILFYAKQ 417
R+ND V + + S++AY+LFY ++
Sbjct: 409 LRINDDEVDTIPRAPLGSKNAYMLFYMRR 437
>gi|426343802|ref|XP_004038475.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
6-like, partial [Gorilla gorilla gorilla]
Length = 387
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 115/321 (35%), Positives = 180/321 (56%), Gaps = 17/321 (5%)
Query: 102 KPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDH 161
+P VGAGL+N+GNTC++NA LQC T+T PL + S +H + C C++C ++ H
Sbjct: 74 RPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCH--RHKGCMLCTMQAH 131
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES 221
+ +L G V+ P + +++ F R +QEDAHEFL +D ++ CL K
Sbjct: 132 VTRALYRPGHVIQPSQA------LAAGFHRGKQEDAHEFLMFAVDAMKKACLPGH-KQVD 184
Query: 222 LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLE 281
S ++ ++FGG S+++C +C SDT++P +D++L+I+ S+ ALE K E
Sbjct: 185 HHSNDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVKQALEQLVKPE 244
Query: 282 KIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK-TDGSYVVKIDKHVEFPLE 340
++ + E + C C ++ K L L V LKRF G+ K+ K+V++P
Sbjct: 245 EL-NGENAYHCALCLQKAPASKTLTLHTSAKVLILVLKRFSDVTGN---KLVKNVQYPEC 300
Query: 341 LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVE 400
LD++PY S Q L Y LYA++ H G S GHYFSY+++ W++++D+ VT
Sbjct: 301 LDMQPYMS--QQITGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASG 358
Query: 401 EEFVLSQDAYILFYAKQGTEW 421
LSQ AY+LFY Q +EW
Sbjct: 359 ITSALSQQAYVLFYI-QKSEW 378
>gi|402912765|ref|XP_003918915.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like, partial [Papio anubis]
Length = 400
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 113/317 (35%), Positives = 180/317 (56%), Gaps = 16/317 (5%)
Query: 102 KPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDH 161
+P VGAGL+N+GNTC++NA LQC T+T PL + S +H + C C++C + H
Sbjct: 74 RPAAVGAGLQNMGNTCYMNASLQCLTYTPPLANYMLSQEHSQLCH--RHKCCMLCTMEAH 131
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES 221
I +L G V+ P + +++ F R +QEDAHEFL ++D ++ CL K
Sbjct: 132 ITRALHCPGHVIQPSQA------LAAGFHRGKQEDAHEFLMFIVDAMKKACLPGH-KQVD 184
Query: 222 LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLE 281
S+ ++ ++FGGC S+++C +C SDT++P +D++L+I+ S+ ALE K E
Sbjct: 185 HDSEDTTLIHQIFGGCWRSQIKCLHCQGVSDTFDPYLDIALDIQAAQSVKQALEQVVKPE 244
Query: 282 KIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK-TDGSYVVKIDKHVEFPLE 340
++ + E + C C ++ K L V LKRF G+ K+ K+V++P
Sbjct: 245 EL-NGENAYHCGLCLQKAPASKTFTLHTSAKVLILVLKRFSDVTGN---KLAKNVQYPEC 300
Query: 341 LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVE 400
LD++PY S Q + L Y LYA++ H G S GHY SY+++ W++++D+ VT
Sbjct: 301 LDVQPYMS--QQNTGPLVYVLYAVLVHAGWSCHNGHYLSYVKAPGGQWYKMDDAEVTACS 358
Query: 401 EEFVLSQDAYILFYAKQ 417
VLSQ AY+LFY ++
Sbjct: 359 IASVLSQQAYVLFYIQK 375
>gi|402913327|ref|XP_003919158.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like, partial [Papio anubis]
Length = 392
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 113/317 (35%), Positives = 180/317 (56%), Gaps = 16/317 (5%)
Query: 102 KPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDH 161
+P VGAGL+N+GNTC++NA LQC T+T PL + S +H + C C++C + H
Sbjct: 74 RPAAVGAGLQNMGNTCYMNASLQCLTYTPPLANYMLSQEHSQLCH--RHKCCMLCTMEAH 131
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES 221
I +L G V+ P + +++ F R +QEDAHEFL ++D ++ CL K
Sbjct: 132 ITRALHCPGHVIQPSQA------LAAGFHRGKQEDAHEFLMFIVDAMKKACLPGH-KQVD 184
Query: 222 LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLE 281
S+ ++ ++FGGC S+++C +C SDT++P +D++L+I+ S+ ALE K E
Sbjct: 185 HDSEDTTLIHQIFGGCWRSQIKCLHCQGVSDTFDPYLDIALDIQAAQSVKQALEQVVKPE 244
Query: 282 KIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK-TDGSYVVKIDKHVEFPLE 340
++ + E + C C ++ K L V LKRF G+ K+ K+V++P
Sbjct: 245 EL-NGENAYHCGLCLQKAPASKTFTLHTSAKVLILVLKRFSDVTGN---KLAKNVQYPEC 300
Query: 341 LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVE 400
LD++PY S Q + L Y LYA++ H G S GHY SY+++ W++++D+ VT
Sbjct: 301 LDIQPYMS--QQNTGPLVYVLYAVLVHAGWSCHNGHYLSYVKAPGGQWYKMDDAEVTACS 358
Query: 401 EEFVLSQDAYILFYAKQ 417
VLSQ AY+LFY ++
Sbjct: 359 IASVLSQQAYVLFYIQK 375
>gi|299470395|emb|CBN80156.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 782
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 126/348 (36%), Positives = 190/348 (54%), Gaps = 43/348 (12%)
Query: 97 WPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDH-----------PRPC 145
WP QI G GLEN+GNTC++N+ILQC ++ PL Q L + + P
Sbjct: 128 WPCQI-----GVGLENMGNTCYLNSILQCLSYVPPLAQHLLNGSYSQGSHATCSESPFSF 182
Query: 146 DGATEGFC---VICALRD-----HIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDA 197
+G+T+ FC ++ A++ H S ++ + + PR DNL I F+R +QEDA
Sbjct: 183 NGSTD-FCEDDILGAMQKLVGQIHQTKSGSAEQQAIRPRTFSDNLRKIGEKFRRGRQEDA 241
Query: 198 HEFLQCLLDRLESCCLDSKTKDESLSSQ--GDNIVQRVFGGCLISKLQCCNCGSCSDTYE 255
HEFL+ L+D++ L+ + D ++ + RVFGG L S+L+C CG CSDT++
Sbjct: 242 HEFLRHLVDKMAGSYLERRGVDPFAPNRLAETTPIHRVFGGYLRSQLKCSECGFCSDTFD 301
Query: 256 PLIDLSLEIEDVGSLGSALESFT---KLEKIEDPET-----KFTCEKCKEQVSVEKQLML 307
P +DL++ +E V S G A+ + L + PET ++ C C + V EK L +
Sbjct: 302 PFMDLAMNVEKVDSSGVAMNERSLQAALRRFTAPETLGAGNEWKCGGCNKLVEAEKNLSV 361
Query: 308 DKVPSVAAFHLKRFK-TDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVE 366
K P+ F LKRF T+G K+ H+ F +L+L+ SG + Y L +V
Sbjct: 362 FKPPNALVFQLKRFGFTNGPR--KVKDHISFGDKLNLE--VSG---PERWANYDLTGVVV 414
Query: 367 HMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFY 414
H G + + GHY++Y+RSS +W R+NDS VT+V + VL AY+LFY
Sbjct: 415 HSGKTMSSGHYYAYVRSSAGSWARMNDSVVTKVTLDTVLRDKAYVLFY 462
>gi|168037578|ref|XP_001771280.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677369|gb|EDQ63840.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 336
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 122/315 (38%), Positives = 178/315 (56%), Gaps = 13/315 (4%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL N GN+CF+NA+LQCFT+T PLV L S DH R C +C ICAL++H ++
Sbjct: 24 GLLNCGNSCFVNAVLQCFTYTQPLVAYLLSGDHGRKCKCKKTDWCFICALQEH---AVKV 80
Query: 169 SGKV-LSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSS--Q 225
++ SP ++ +L I+ QEDAHEF+ + ++S CLD ++ + S Q
Sbjct: 81 KQRIPFSPSGILSHLRSIARGLNYGNQEDAHEFMSSAIHLMQSICLDEAGGEKGVDSCTQ 140
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEI-EDVGSLGSALESFTKLEKIE 284
+FGG L S+++C C S+ YE ++DL++EI +V SL AL FT E I
Sbjct: 141 QTTFTHHIFGGLLQSQVKCNQCHLQSNRYEVMMDLAVEIPGNVRSLEDALGVFTAPE-IL 199
Query: 285 DPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKT-DGSYVVKIDKHVEFPLELDL 343
D E K+ C +C V KQL + + P++ LKRFK+ G K+ +V FP LD+
Sbjct: 200 DGENKYKCNRCDAYVDAYKQLTVHEAPNILVVTLKRFKSLQGGRYGKLTNYVAFPEVLDM 259
Query: 344 KPYTSGGQNSDVELKYHLYAIVEHMGSSPTC--GHYFSYIRSSPDTWHRLNDSRVTRVEE 401
PY SG N + Y+LYA+V H S GHYF +++ W+R +D++VT V
Sbjct: 260 GPYMSG--NRGLTPVYNLYAVVVHASVSNAAHNGHYFCLVKNPNGYWYRADDAKVTEVGV 317
Query: 402 EFVLSQDAYILFYAK 416
++V SQ+AYIL Y +
Sbjct: 318 DWVTSQEAYILLYKR 332
>gi|109085555|ref|XP_001084204.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Macaca mulatta]
Length = 529
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 111/317 (35%), Positives = 180/317 (56%), Gaps = 16/317 (5%)
Query: 102 KPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDH 161
+P VGAGL+N+G+TC++NA LQC T+T PL + S +H + C C++C + H
Sbjct: 74 RPAAVGAGLQNMGDTCYVNASLQCLTYTPPLANYMLSREHSQLCH--CHKSCMLCTMEAH 131
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES 221
I +L G V+ P + +++ F R +QEDAHEFL ++D ++ CL K
Sbjct: 132 ITWALHCPGHVIQPSQT------LAAGFHRGKQEDAHEFLMFIVDAMKKACLPGH-KQVD 184
Query: 222 LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLE 281
S+ ++ ++FGGC S+++C +C SDT++P +D++L+I S+ ALE K E
Sbjct: 185 HDSEDTTLIHQIFGGCWRSQIKCLHCQGVSDTFDPYLDIALDIRAAQSVKQALEQVVKPE 244
Query: 282 KIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK-TDGSYVVKIDKHVEFPLE 340
++ + E + C C ++ K L V LKRF G+ K+ K+V++P
Sbjct: 245 EL-NGENAYHCGLCLQKAPASKTFTLHTSAKVLILVLKRFSDVTGN---KLAKNVQYPEC 300
Query: 341 LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVE 400
LD++PY S Q + L Y LYA++ H G S GHY S++++ W++++D++VT
Sbjct: 301 LDMQPYMS--QQNTGPLVYVLYAVLVHAGWSCHNGHYLSFVKAPGGQWYKMDDAKVTACS 358
Query: 401 EEFVLSQDAYILFYAKQ 417
VLSQ AY+LFY ++
Sbjct: 359 IASVLSQQAYVLFYIQK 375
>gi|219519282|gb|AAI45059.1| Dub1a protein [Mus musculus]
gi|223460645|gb|AAI37943.1| Dub1a protein [Mus musculus]
Length = 467
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 116/317 (36%), Positives = 183/317 (57%), Gaps = 16/317 (5%)
Query: 103 PTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHI 162
P G G GL+N GN+C++NA LQC THT PL + S +H + C + EG C +CA+ H+
Sbjct: 45 PQGPGCGLQNTGNSCYLNAALQCLTHTPPLADYMLSQEHSQTC-CSPEG-CKMCAMEAHV 102
Query: 163 ELSL--ASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDE 220
SL SG V+ P ++ ++S F + +QEDAHEFL L+ + CL + E
Sbjct: 103 TQSLLHTHSGDVMKPSQI------LTSAFHKRKQEDAHEFLMFTLETMHESCLQVHRQSE 156
Query: 221 SLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKL 280
+S+ + + +FGG S+++C +C S +Y+P +D+ L+I V S+ AL+ K
Sbjct: 157 P-TSEDSSPIHDIFGGWWRSQIKCHHCQGTSYSYDPFLDIPLDISSVQSVKQALQDTEKA 215
Query: 281 EKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE 340
E++ E + C +C+++ K L L P V LKRF GS K+D+ V +P
Sbjct: 216 EELCG-ENSYYCGRCRQKKPASKTLKLYSAPKVLMLVLKRF--SGSMGKKLDRKVSYPEF 272
Query: 341 LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVE 400
LDLKPY S Q + L Y LYA++ H G++ GHYF +++ W++++D++VT +
Sbjct: 273 LDLKPYLS--QPTGGPLPYALYAVLVHEGATCHSGHYFCCVKAGHGKWYKMDDTKVTSCD 330
Query: 401 EEFVLSQDAYILFYAKQ 417
VL+++AY+LFY +Q
Sbjct: 331 VTSVLNENAYVLFYVQQ 347
>gi|402912993|ref|XP_003919017.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Papio anubis]
Length = 529
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 111/317 (35%), Positives = 179/317 (56%), Gaps = 16/317 (5%)
Query: 102 KPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDH 161
+P VGAGL+N+GNTC++NA LQC T+T PL + S +H + C C++C + H
Sbjct: 74 RPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQLCQ--RHKCCMLCTMEAH 131
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES 221
I ++ G V+ P + +++ F R +QEDAHEFL ++D ++ CL K
Sbjct: 132 ITRAVHCPGHVIQPSQA------LAAGFHRGKQEDAHEFLMFIVDAMKKACLPGH-KQVD 184
Query: 222 LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLE 281
S+ ++ ++FGGC S+++C +C SDT++P +D++L+I+ S+ ALE K E
Sbjct: 185 HDSEDTTLIHQIFGGCWRSQIKCLHCQGVSDTFDPYLDIALDIQAAQSVKQALEQVVKPE 244
Query: 282 KIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK-TDGSYVVKIDKHVEFPLE 340
++ + E + C C ++ K L V LKRF G+ K+ K+V++P
Sbjct: 245 EL-NGENAYHCGLCLQKAPASKTFTLHTSAKVLILVLKRFSDVTGN---KLAKNVQYPEC 300
Query: 341 LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVE 400
LD++PY S Q + L Y LYA++ H G GHY SY+++ W++++D+ VT
Sbjct: 301 LDMQPYMS--QQNTGPLVYVLYAVLVHAGWCCHNGHYLSYVKAPGGQWYKMDDAEVTACS 358
Query: 401 EEFVLSQDAYILFYAKQ 417
VLSQ AY+LFY ++
Sbjct: 359 IASVLSQQAYVLFYIQK 375
>gi|302696891|ref|XP_003038124.1| hypothetical protein SCHCODRAFT_37924 [Schizophyllum commune H4-8]
gi|300111821|gb|EFJ03222.1| hypothetical protein SCHCODRAFT_37924, partial [Schizophyllum
commune H4-8]
Length = 314
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 115/326 (35%), Positives = 181/326 (55%), Gaps = 14/326 (4%)
Query: 92 PVEKHWPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPR-PCDGATE 150
P++ WP + GVGAGL N GNTCF+N+ LQC HT PL++ L + H + C +
Sbjct: 2 PIDISWPDNV--NGVGAGLFNTGNTCFMNSALQCLFHTPPLLRLLSA--HSKDTCK--SS 55
Query: 151 GFCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLES 210
GFC+ C ++ S +S+ +P + NL + + +QED+HEFL+ ++ L+
Sbjct: 56 GFCMTCCMKYTAMRSQSSNKSAFNPDGITRNLKAFAKSLRYGRQEDSHEFLRHAIEGLQR 115
Query: 211 CCLDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSL 270
CL + + + V ++FGG L S++ C CG SDTY+ ++DLSL+I SL
Sbjct: 116 SCLAGQPQKVDPKLAETSWVHQLFGGQLRSRVHCKGCGHNSDTYDSILDLSLDIHRTSSL 175
Query: 271 GSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVK 330
AL+SF + ++ + K+ C+ CK+ V+ EK+ ++K P V HLKRF GS K
Sbjct: 176 KDALKSFVAPDYLKGSD-KYKCDHCKKYVNAEKRFTINKAPLVLTIHLKRFSPFGS---K 231
Query: 331 IDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHR 390
+ + + + LKPY S G +Y LY ++ H GS P GHYFS+++S W+
Sbjct: 232 LTNLLHYDEHITLKPYMSEGSFGP---RYSLYGVICHSGSGPNSGHYFSFVKSKQGRWYE 288
Query: 391 LNDSRVTRVEEEFVLSQDAYILFYAK 416
+ND VT + + + + AY+L Y +
Sbjct: 289 MNDESVTPCSKPYPMLKTAYMLMYIQ 314
>gi|363740969|ref|XP_424101.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36, partial
[Gallus gallus]
Length = 884
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 170/294 (57%), Gaps = 8/294 (2%)
Query: 121 AILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLASSGKVLSPRKLVD 180
A LQC T+T PL L S +H R C GFC++C +++H+ + A+SG + P +
Sbjct: 1 ATLQCLTYTPPLACYLLSKEHSRACHQG--GFCMMCVMQNHMIQAFANSGNAIKPVSFIR 58
Query: 181 NLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDNIVQRVFGGCLIS 240
+L I+ F+ QEDAHEFL+ +D ++ CL T+ + +Q +V ++FGG L S
Sbjct: 59 DLKKIARHFRFGSQEDAHEFLRYTIDAMQKACLSGCTRLDR-QTQATTLVHQIFGGYLRS 117
Query: 241 KLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVS 300
+++C C S SDTY+P +D+SLEI ++ ALE F K + + + + C +CK++V
Sbjct: 118 RVKCSVCKSVSDTYDPYLDVSLEIRQAANIVRALELFVKSDVLSG-DNAYMCARCKKKVP 176
Query: 301 VEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYH 360
K+ + + +V LKRF KI K V +P L+++PY S QNS + Y
Sbjct: 177 ASKRFTIHRASNVLTLSLKRFANFSG--GKITKDVGYPEFLNIRPYMS--QNSGDPVMYG 232
Query: 361 LYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFY 414
LYA++ H G S GHY+ Y+++S W+++NDS V + VL+Q AY+LFY
Sbjct: 233 LYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHCSNIKVVLNQQAYVLFY 286
>gi|119575450|gb|EAW55048.1| ubiquitin specific peptidase 42, isoform CRA_b [Homo sapiens]
Length = 1176
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 117/313 (37%), Positives = 169/313 (53%), Gaps = 49/313 (15%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL+NLGNTCF NA LQC T+T PL + S +H + C
Sbjct: 109 VGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTC-------------------- 148
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
I+ F+ QEDAHEFLQ +D ++ CL+ K + +Q
Sbjct: 149 -------------------IARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDR-HTQ 188
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C NC SDT++P +D++LEI+ S+ ALE F K E++ D
Sbjct: 189 ATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQL-D 247
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK--TDGSYVVKIDKHVEFPLELDL 343
E + C KCK+ V K+ + + +V LKRF T G KI K V++P LD+
Sbjct: 248 GENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG----KIAKDVKYPEYLDI 303
Query: 344 KPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
+PY S Q + + Y LYA++ H G + GHYF YI++S W+++NDS V+ +
Sbjct: 304 RPYMS--QPNGEPIVYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRS 361
Query: 404 VLSQDAYILFYAK 416
VLSQ AY+LFY +
Sbjct: 362 VLSQQAYVLFYIR 374
>gi|51094457|gb|EAL23716.1| ubiquitin specific protease 42 [Homo sapiens]
Length = 1246
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 117/313 (37%), Positives = 169/313 (53%), Gaps = 49/313 (15%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL+NLGNTCF NA LQC T+T PL + S +H + C
Sbjct: 109 VGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTC-------------------- 148
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
I+ F+ QEDAHEFLQ +D ++ CL+ K + +Q
Sbjct: 149 -------------------IARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDR-HTQ 188
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C NC SDT++P +D++LEI+ S+ ALE F K E++ D
Sbjct: 189 ATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQL-D 247
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK--TDGSYVVKIDKHVEFPLELDL 343
E + C KCK+ V K+ + + +V LKRF T G KI K V++P LD+
Sbjct: 248 GENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG----KIAKDVKYPEYLDI 303
Query: 344 KPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
+PY S Q + + Y LYA++ H G + GHYF YI++S W+++NDS V+ +
Sbjct: 304 RPYMS--QPNGEPIVYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRS 361
Query: 404 VLSQDAYILFYAK 416
VLSQ AY+LFY +
Sbjct: 362 VLSQQAYVLFYIR 374
>gi|402912436|ref|XP_003918772.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Papio anubis]
Length = 529
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 111/317 (35%), Positives = 179/317 (56%), Gaps = 16/317 (5%)
Query: 102 KPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDH 161
+P VGAGL+N+GNTC++NA LQC T+T PL + S +H + C C++C + H
Sbjct: 74 RPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQLCQ--RHKCCMLCTMEAH 131
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES 221
I ++ G V+ P + +++ F R +QEDAHEFL ++D ++ CL K
Sbjct: 132 ITRAVHCPGHVIQPSQA------LAAGFHRGKQEDAHEFLMFIVDAMKKACLPGH-KQVD 184
Query: 222 LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLE 281
S+ ++ ++FGGC S+++C +C SDT++P +D++L+I+ S+ ALE K E
Sbjct: 185 HDSEDTTLIHQIFGGCWRSQIKCLHCQGVSDTFDPYLDIALDIQAAQSVKQALEQVMKPE 244
Query: 282 KIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK-TDGSYVVKIDKHVEFPLE 340
++ + E + C C ++ K L V LKRF G+ K+ K+V++P
Sbjct: 245 EL-NGENAYHCGLCLQKAPASKTFTLHTSAKVLILVLKRFSDVTGN---KLAKNVQYPEC 300
Query: 341 LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVE 400
LD++PY S Q + L Y LYA++ H G GHY SY+++ W++++D+ VT
Sbjct: 301 LDMQPYMS--QQNTGPLVYVLYAVLVHAGWCCHNGHYLSYVKAPGGQWYKMDDAEVTACS 358
Query: 401 EEFVLSQDAYILFYAKQ 417
VLSQ AY+LFY ++
Sbjct: 359 IASVLSQQAYVLFYIQK 375
>gi|355568976|gb|EHH25257.1| hypothetical protein EGK_09045 [Macaca mulatta]
Length = 1126
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 114/316 (36%), Positives = 176/316 (55%), Gaps = 15/316 (4%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL NLGNTCF+NA +QC T+T PL L S +H R C + FC++C +++HI +
Sbjct: 120 VGAGLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGS--FCMLCVMQNHIVQA 177
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQ---RYQQEDAHEFLQCLLD--RLESCCLDSKTKDE 220
A+SG + P + +L + R +E + LL L+ C L + +
Sbjct: 178 FANSGNAIKPVSFIRDLKSKHQSIEVGGRMDEEWFCSYTGHLLQPPSLKGCGLLFRLDRQ 237
Query: 221 SLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKL 280
+ Q +V ++FGG L S+++C C S SDTY+P +D++LEI ++ ALE F K
Sbjct: 238 T---QATTLVHQIFGGYLRSRVKCSMCKSVSDTYDPYLDVALEIRQAANIVRALELFVKA 294
Query: 281 EKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE 340
+ + E + C KCK++V K+ + + +V LKRF KI K V +P
Sbjct: 295 DVLSG-ENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGG--KITKDVGYPEF 351
Query: 341 LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVE 400
L+++PY S QN+ + Y LYA++ H G S GHY+ Y+++S W+++NDS V
Sbjct: 352 LNIRPYMS--QNNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSN 409
Query: 401 EEFVLSQDAYILFYAK 416
+ VL+Q AY+LFY +
Sbjct: 410 VKVVLNQQAYVLFYLR 425
>gi|260801080|ref|XP_002595424.1| hypothetical protein BRAFLDRAFT_69255 [Branchiostoma floridae]
gi|229280670|gb|EEN51436.1| hypothetical protein BRAFLDRAFT_69255 [Branchiostoma floridae]
Length = 965
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 110/316 (34%), Positives = 179/316 (56%), Gaps = 16/316 (5%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VG GL+N+GNTCF+N+++QC ++T PLV L S +H + C +C++C L H+
Sbjct: 134 VGVGLDNMGNTCFLNSVIQCLSYTAPLVNHLMS-EHQQSCR--VSDWCMMCELGRHLHRV 190
Query: 166 LASS-GKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDS----KTKDE 220
+S + P +++ L I+ Q +QEDAHEF +++ ++ CL + K+
Sbjct: 191 FNNSNAHSIRPMTIINRLKSIAKTMQFGRQEDAHEFFMSVVNAMQRACLMNCNINPNKNV 250
Query: 221 SLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKL 280
S+ IV +VF G S+++CC C + S+T++P +DL L+I S+ LE + +
Sbjct: 251 DTSTANTTIVYQVFSGYCRSQVRCCRCSNLSNTFDPFLDLPLDIRG-SSVQQCLERYVRA 309
Query: 281 EKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE 340
E++ D E ++CEKCK + K+L + + P+V LKRF G +K+ K V++
Sbjct: 310 EQMSD-ENAYSCEKCKRKCQAVKKLSIHRAPNVLTISLKRFNNMG---LKVTKEVQYSET 365
Query: 341 LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVE 400
++L+ Y S + Y LYA++ H G S GHY+ +I++ WH +NDS V +V
Sbjct: 366 MNLRAYMS---QEGPPVIYKLYAVLVHQGFSCHGGHYYCFIKAPNGVWHMMNDSLVRQVG 422
Query: 401 EEFVLSQDAYILFYAK 416
VLSQ AY+LFY +
Sbjct: 423 LNTVLSQQAYLLFYIR 438
>gi|355754426|gb|EHH58391.1| hypothetical protein EGM_08229 [Macaca fascicularis]
Length = 1130
Score = 205 bits (522), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 114/316 (36%), Positives = 176/316 (55%), Gaps = 15/316 (4%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL NLGNTCF+NA +QC T+T PL L S +H R C + FC++C +++HI +
Sbjct: 120 VGAGLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGS--FCMLCVMQNHIVQA 177
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQ---RYQQEDAHEFLQCLLD--RLESCCLDSKTKDE 220
A+SG + P + +L + R +E + LL L+ C L + +
Sbjct: 178 FANSGNAIKPVSFIRDLKSKHQSIEVGGRMDEEWFCSYTGHLLQPPSLKGCGLLFRLDRQ 237
Query: 221 SLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKL 280
+ Q +V ++FGG L S+++C C S SDTY+P +D++LEI ++ ALE F K
Sbjct: 238 T---QATTLVHQIFGGYLRSRVKCSMCKSVSDTYDPYLDVALEIRQAANIVRALELFVKA 294
Query: 281 EKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE 340
+ + E + C KCK++V K+ + + +V LKRF KI K V +P
Sbjct: 295 DVLSG-ENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGG--KITKDVGYPEF 351
Query: 341 LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVE 400
L+++PY S QN+ + Y LYA++ H G S GHY+ Y+++S W+++NDS V
Sbjct: 352 LNIRPYMS--QNNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSN 409
Query: 401 EEFVLSQDAYILFYAK 416
+ VL+Q AY+LFY +
Sbjct: 410 VKVVLNQQAYVLFYLR 425
>gi|115299771|ref|NP_958811.2| deubiquitinating enzyme 1a [Mus musculus]
Length = 468
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 118/317 (37%), Positives = 183/317 (57%), Gaps = 16/317 (5%)
Query: 103 PTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHI 162
P G G GL+N GN+C++NA LQC THT PL + S +H + C + EG C +CA+ H+
Sbjct: 46 PQGPGCGLQNTGNSCYLNAALQCLTHTPPLADYMLSQEHSQTC-CSPEG-CKMCAMEAHV 103
Query: 163 ELSL--ASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDE 220
SL SG V+ P + N S+F +R +QEDAHEFL L+ + CL + E
Sbjct: 104 TQSLLHTHSGDVMKPSQ-----NLTSAFHKR-KQEDAHEFLMFTLETMHESCLQVHRQSE 157
Query: 221 SLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKL 280
+S+ + + +FGG S+++C +C S +Y+P +D+ L+I V S+ AL+ K
Sbjct: 158 P-TSEDSSPIHDIFGGWWRSQIKCHHCQGTSYSYDPFLDIPLDISSVQSVKQALQDTEKA 216
Query: 281 EKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE 340
E++ E + C +C+++ K L L P V LKRF GS K+D+ V +P
Sbjct: 217 EELCG-ENSYYCGRCRQKKPASKTLKLYSAPKVLMLVLKRF--SGSMGKKLDRKVSYPEF 273
Query: 341 LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVE 400
LDLKPY S Q + L Y LYA++ H G++ GHYF +++ W++++D++VT +
Sbjct: 274 LDLKPYLS--QPTGGPLPYALYAVLVHEGATCHSGHYFCCVKAGHGKWYKMDDTKVTSCD 331
Query: 401 EEFVLSQDAYILFYAKQ 417
VL+++AY+LFY +Q
Sbjct: 332 VTSVLNENAYVLFYVQQ 348
>gi|170091622|ref|XP_001877033.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164648526|gb|EDR12769.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 312
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 116/327 (35%), Positives = 172/327 (52%), Gaps = 15/327 (4%)
Query: 90 SRPVEKHWPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGAT 149
S ++ WP AGL N GNTCF+N+ LQC HT PL++ + S R
Sbjct: 1 SDAIDMTWPASCNS---AAGLFNSGNTCFLNSALQCLLHTPPLLRIIISHKTCR----MD 53
Query: 150 EGFCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLE 209
+GFC+ C LR+ I + S G V+ P + + L I+ ++ +QED HEFL+ +D L+
Sbjct: 54 KGFCMSCNLREVIVKAYGSKGPVV-PSSITNRLQTIAKHMRKGRQEDTHEFLRYAIDALQ 112
Query: 210 SCCLDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGS 269
CL + V +VFGG L S++ C +CG SDT++ ++DLSL+I S
Sbjct: 113 KSCLAGHSPKIDPKIAETTWVHKVFGGRLRSRVTCRDCGHNSDTFDSILDLSLDIHKSES 172
Query: 270 LGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVV 329
L AL +F ++ + + K+ CEKCK+ V EK+ + + P V H KRF G
Sbjct: 173 LRDALRTFVAIDYLRGAD-KYKCEKCKKHVVAEKRFTIHEAPLVLTVHFKRFSPMGR--- 228
Query: 330 KIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWH 389
KI H+ F L LKP+ S GQ+ Y LY I+ H G P GHY++++++ W
Sbjct: 229 KIGHHINFEEHLSLKPFMSEGQHGP---SYSLYGIICHAGGGPNSGHYYAFVKAKDGQWW 285
Query: 390 RLNDSRVTRVEEEFVLSQDAYILFYAK 416
+ND +RV + AY+LFY +
Sbjct: 286 EMNDEMRSRVGSAPTNKKTAYMLFYIR 312
>gi|378925630|ref|NP_001243781.1| ubiquitin specific peptidase 17-like family member 10 [Homo
sapiens]
gi|449061953|sp|C9JJH3.1|U17LA_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
10
Length = 530
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 115/321 (35%), Positives = 179/321 (55%), Gaps = 17/321 (5%)
Query: 102 KPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDH 161
+P VGAGL+N+GNTC++NA LQC T+ PL + +H + C C++C ++ H
Sbjct: 74 RPAAVGAGLQNMGNTCYVNASLQCLTYKPPLANYMLFREHSQTCH--RHKGCMLCTMQAH 131
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES 221
I +L G V+ P + +++ F R +QEDAHEFL +D + CL K
Sbjct: 132 ITRALHIPGHVIQPSQA------LAAGFHRGKQEDAHEFLMFTVDAMRKACLPGH-KQVD 184
Query: 222 LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLE 281
S+ ++ ++FGG S+++C +C SDT++P +D++L+I+ S+ ALE K E
Sbjct: 185 RHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPE 244
Query: 282 KIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK-TDGSYVVKIDKHVEFPLE 340
++ + E + C C ++ K L L V LKRF G+ KI K+V++P
Sbjct: 245 EL-NGENAYHCGVCLQRAPASKTLTLHNSAKVLILVLKRFPDVTGN---KIAKNVQYPEC 300
Query: 341 LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVE 400
LD++PY S Q + L Y LYA++ H G S GHY SY+++ W++++D+ VT
Sbjct: 301 LDMQPYMS--QQNTGPLVYVLYAVLVHAGWSCHNGHYSSYVKAQEGQWYKMDDAEVTASS 358
Query: 401 EEFVLSQDAYILFYAKQGTEW 421
VLSQ AY+LFY Q +EW
Sbjct: 359 ITSVLSQQAYVLFYI-QKSEW 378
>gi|19075305|ref|NP_587805.1| ubiquitin C-terminal hydrolase Ubp16 [Schizosaccharomyces pombe
972h-]
gi|74626856|sp|O74442.1|UBP16_SCHPO RecName: Full=Probable ubiquitin carboxyl-terminal hydrolase 16;
AltName: Full=Deubiquitinating enzyme 16; AltName:
Full=Ubiquitin thioesterase 16; AltName:
Full=Ubiquitin-specific-processing protease 16
gi|3560166|emb|CAA20678.1| ubiquitin C-terminal hydrolase Ubp16 [Schizosaccharomyces pombe]
Length = 457
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 113/315 (35%), Positives = 171/315 (54%), Gaps = 13/315 (4%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N++LQ T T PLVQ L S H C CV+C + H+ + +
Sbjct: 126 GLVNLGNTCFMNSVLQLMTQTPPLVQYLLSGQHSLSCRMNA---CVLCRMEQHVARAYPN 182
Query: 169 SG----KVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSS 224
G P + L ISS F+ Y+QEDAHEF++ L+D + CL + K+ S
Sbjct: 183 KGTKRASAFKPSGIQSMLKVISSHFRPYRQEDAHEFMRYLVDAWQKSCLQNH-KNLDHPS 241
Query: 225 QGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIE 284
+ ++V R+FGG L ++ C C S+TY+ L+DLS++ + SL +L+ F EK+
Sbjct: 242 RETSVVHRIFGGYLRQQILCSVCKKPSNTYQALLDLSVDAKG-SSLADSLKHFVHAEKLT 300
Query: 285 DPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLK 344
+ K+ CE CK+ V KQ+ + + P++ H KRF +G KI K + +P +L
Sbjct: 301 K-QNKYRCENCKQLVDASKQMTIYRAPNILTIHFKRFTFNGFQSSKISKQISYPESFNLG 359
Query: 345 PYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFV 404
PY S + + Y L ++ H G S GHY+S+ +SS W + +D V+ + V
Sbjct: 360 PYMS---DPNCSCWYELIGVLVHAGGSTRSGHYYSFCKSSNGVWLKFDDDFVSNSSIDRV 416
Query: 405 LSQDAYILFYAKQGT 419
L+Q AYIL Y ++ T
Sbjct: 417 LNQQAYILQYKRKST 431
>gi|348673035|gb|EGZ12854.1| hypothetical protein PHYSODRAFT_511733 [Phytophthora sojae]
Length = 742
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 117/342 (34%), Positives = 182/342 (53%), Gaps = 39/342 (11%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQAL------RSFD----------------HPR 143
+G G NLGNTC++N++LQC T+T Q L SF+ +
Sbjct: 108 IGPGFANLGNTCYLNSVLQCLTYTPCFAQYLLDKEVFASFNGGMLPASGKNGNKFGKNGF 167
Query: 144 PCDGATEGFCVICALRDHIE-LSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQ 202
G GFC + A+ ++ + ++ KVL P++LV N+ +IS F+ +QED+HEF +
Sbjct: 168 NTSGGGNGFCSVRAMSRLLQSVHGNNAAKVLQPKELVMNVRHISKSFRIGRQEDSHEFFR 227
Query: 203 CLLDRLESCCL-DSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLS 261
LLD ++ CL + K E+ S+ V R+FGG L + L+C CG S+ ++ +DLS
Sbjct: 228 LLLDSMQRSCLRKANIKSETHSAASTTFVHRIFGGMLKNYLKCAKCGYVSERFDDFLDLS 287
Query: 262 LEI-EDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKR 320
LEI V ++ AL FT +E ++D + C C + EK L + + P+V LKR
Sbjct: 288 LEIAHGVNTVKGALNHFTAIETLDD-RNAWKCTSCGKPSRAEKGLTIAECPNVLMIQLKR 346
Query: 321 FKTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVE------LKYHLYAIVEHMGSSPTC 374
F KI +H+EFP LD+ + G + + E KY L+A++ H G S C
Sbjct: 347 FDL---MFGKIKRHIEFPRMLDI----ASGMSKNCEDRRRGRTKYELHAVLVHAGFSTDC 399
Query: 375 GHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAK 416
GHY+++++ S W+ +ND V V + VL Q AY+LFY++
Sbjct: 400 GHYYAFVKGSSGQWYEMNDDTVRWVSIDMVLQQKAYMLFYSR 441
>gi|51971603|dbj|BAD44466.1| unknown protein [Arabidopsis thaliana]
Length = 631
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 123/333 (36%), Positives = 181/333 (54%), Gaps = 15/333 (4%)
Query: 103 PTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHI 162
P GL N GN+CF N ILQC + T PLV L H R C +C +C + H+
Sbjct: 163 PELAPCGLMNCGNSCFANVILQCLSWTRPLVAYLLEKGHKREC--MRNDWCFLCEFQTHV 220
Query: 163 ELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESL 222
E + + S SP ++ L I +QEDAHEF++ +D ++S CLD ++ +
Sbjct: 221 ERA-SQSRFPFSPMNIISRLTNIGGTLGYGRQEDAHEFMRYAIDMMQSVCLDEFGGEKIV 279
Query: 223 --SSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE-DVGSLGSALESFTK 279
SQ ++Q +FGG L S++QC C SD YE ++DL +E+ D GSL L+ FT
Sbjct: 280 PPRSQETTLIQYIFGGLLQSQVQCTVCNHVSDQYENMMDLIVEMHGDAGSLEECLDQFTA 339
Query: 280 LEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPL 339
E + + + C++C + V K+L + + P++ LKR++ G K++K + FP
Sbjct: 340 EEWLHG-DNMYKCDRCSDYVKACKRLTIRRAPNILTIALKRYQ--GGRYGKLNKRISFPE 396
Query: 340 ELDLKPYTS-GGQNSDVELKYHLYAIVEH--MGSSPTCGHYFSYIRSSPDTWHRLNDSRV 396
LDL PY S GG SDV Y LYA++ H M ++ GHY YI+ W+R++DS +
Sbjct: 397 TLDLNPYMSEGGDGSDV---YKLYAVIVHLDMLNASFFGHYICYIKDFCGNWYRIDDSEI 453
Query: 397 TRVEEEFVLSQDAYILFYAKQGTEWVSSLLEAE 429
VE E VLSQ AY+L Y++ SS L +E
Sbjct: 454 ESVELEDVLSQRAYMLLYSRIQARSSSSCLRSE 486
>gi|15236036|ref|NP_194895.1| ubiquitin carboxyl-terminal hydrolase 18 [Arabidopsis thaliana]
gi|166201351|sp|Q67XW5.2|UBP18_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 18; AltName:
Full=Deubiquitinating enzyme 18; Short=AtUBP18; AltName:
Full=Ubiquitin thioesterase 18; AltName:
Full=Ubiquitin-specific-processing protease 18
gi|3281861|emb|CAA19756.1| putative protein [Arabidopsis thaliana]
gi|7270070|emb|CAB79885.1| putative protein [Arabidopsis thaliana]
gi|23296513|gb|AAN13075.1| unknown protein [Arabidopsis thaliana]
gi|332660543|gb|AEE85943.1| ubiquitin carboxyl-terminal hydrolase 18 [Arabidopsis thaliana]
Length = 631
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 123/333 (36%), Positives = 181/333 (54%), Gaps = 15/333 (4%)
Query: 103 PTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHI 162
P GL N GN+CF N ILQC + T PLV L H R C +C +C + H+
Sbjct: 163 PELAPCGLMNCGNSCFANVILQCLSWTRPLVAYLLEKGHKREC--MRNDWCFLCEFQTHV 220
Query: 163 ELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESL 222
E + + S SP ++ L I +QEDAHEF++ +D ++S CLD ++ +
Sbjct: 221 ERA-SQSRFPFSPMNIISRLTNIGGTLGYGRQEDAHEFMRYAIDMMQSVCLDEFGGEKIV 279
Query: 223 --SSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE-DVGSLGSALESFTK 279
SQ ++Q +FGG L S++QC C SD YE ++DL +E+ D GSL L+ FT
Sbjct: 280 PPRSQETTLIQYIFGGLLQSQVQCTVCNHVSDQYENMMDLIVEMHGDAGSLEECLDQFTA 339
Query: 280 LEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPL 339
E + + + C++C + V K+L + + P++ LKR++ G K++K + FP
Sbjct: 340 EEWLHG-DNMYKCDRCSDYVKACKRLTIRRAPNILTIALKRYQ--GGRYGKLNKRISFPE 396
Query: 340 ELDLKPYTS-GGQNSDVELKYHLYAIVEH--MGSSPTCGHYFSYIRSSPDTWHRLNDSRV 396
LDL PY S GG SDV Y LYA++ H M ++ GHY YI+ W+R++DS +
Sbjct: 397 TLDLNPYMSEGGDGSDV---YKLYAVIVHLDMLNASFFGHYICYIKDFCGNWYRIDDSEI 453
Query: 397 TRVEEEFVLSQDAYILFYAKQGTEWVSSLLEAE 429
VE E VLSQ AY+L Y++ SS L +E
Sbjct: 454 ESVELEDVLSQRAYMLLYSRIQARSSSSCLRSE 486
>gi|255548628|ref|XP_002515370.1| cysteine-type endopeptidase, putative [Ricinus communis]
gi|223545314|gb|EEF46819.1| cysteine-type endopeptidase, putative [Ricinus communis]
Length = 632
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 147/446 (32%), Positives = 226/446 (50%), Gaps = 41/446 (9%)
Query: 83 NWGSSLLSRPVEKHWP----IQIKPTGVGA----GLENLGNTCFINAILQCFTHTLPLVQ 134
N + L+ +P E +P I++ GA GL N GN+CF N +LQC T T PLV
Sbjct: 142 NGITKLIKKPTEVLFPYDKFIKLYNWNKGAFPPCGLLNCGNSCFANVVLQCLTFTRPLVA 201
Query: 135 ALRSFDHPRPCDGATEGFCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQ 194
L H R C +C +C + H+E + SS SP ++ L I +Q
Sbjct: 202 YLLEEGHQREC--RRNDWCFLCEFQVHVERASKSS-HPFSPMSILSRLPNIGGNLGYGKQ 258
Query: 195 EDAHEFLQCLLDRLESCCLDSKTKDESL--SSQGDNIVQRVFGGCLISKLQCCNCGSCSD 252
EDAHEF++ +D ++S CLD ++++ + Q ++Q +FGG L S++ C C S+
Sbjct: 259 EDAHEFMRFAIDTMQSVCLDEYGGEKAVDPAFQETTLIQHIFGGHLQSQVICTKCNKISN 318
Query: 253 TYEPLIDLSLEIE-DVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVP 311
E ++DL++EI D GSL LE FT E++ E + C+ C + V K+L + + P
Sbjct: 319 QLENMMDLTVEIHGDSGSLEDCLEQFTDREQLHG-ENMYRCDGCNDYVKAWKRLTIRRAP 377
Query: 312 SVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPYTS-GGQNSDVELKYHLYAIVEH--M 368
++ LKRF++ K++K V FP LDL PYTS GG +DV Y LYA+V H M
Sbjct: 378 NILTIALKRFQS--GRFGKLNKRVAFPESLDLSPYTSEGGDGTDV---YRLYAVVVHVDM 432
Query: 369 GSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAK--------QGTE 420
++ GHY YI+ W+R++D +V VE E VLSQ AY+L Y++ + E
Sbjct: 433 LNASFFGHYICYIKDFCGNWYRVDDCKVRSVELEEVLSQGAYMLLYSRISARPSCLRTVE 492
Query: 421 WVSSLLEAESIGMNADISNSSPKSVLDNVENDYTSRSGVANAESCKANEPSASAGDSSTK 480
L E++G+ + +N + VE SGV + + A E AS +S
Sbjct: 493 PAKELQPTENVGLGS-CTNVKIECTNGRVE----CFSGVESINNTSATESLASERNSGIV 547
Query: 481 FSCQLR-----SIDLEVNETRDTVKG 501
C + +D+++ T D ++
Sbjct: 548 DDCDVELSSAVPMDMDITRTSDLLEA 573
>gi|41019553|tpe|CAD66057.1| TPA: mouse deubiquitinating enzyme 6 [Mus musculus]
Length = 505
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 112/317 (35%), Positives = 182/317 (57%), Gaps = 16/317 (5%)
Query: 103 PTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHI 162
P G G GL+N GN+C++NA LQC THT PL + S +H + C + EG C +CA+ H+
Sbjct: 45 PQGPGCGLQNTGNSCYLNAALQCLTHTPPLADYMLSQEHSQTC-CSPEG-CKMCAMEAHV 102
Query: 163 ELSL--ASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDE 220
SL + SG V+ P ++ ++S F ++QQEDAHEFL L+ + CL + +
Sbjct: 103 TQSLLHSHSGDVMKPSQI------LTSAFHKHQQEDAHEFLMFTLETMHESCLQVHRQSD 156
Query: 221 SLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKL 280
+ Q + + +FGG S+++C +C S T++P +D+ L+I S+ AL K
Sbjct: 157 P-TPQDTSPIHDIFGGWWRSQIKCLHCQGTSHTFDPFLDVPLDISSAQSVNQALWDTGKS 215
Query: 281 EKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE 340
E++ E + C +C++++ K L + P V LKRF K+D+ V +P
Sbjct: 216 EELLG-ENAYYCGRCRQKMPASKTLHVHIAPKVLLLVLKRFSAFTGN--KLDRKVSYPEF 272
Query: 341 LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVE 400
LDLKPY S + + L Y LYA++ H G++ GHYF +++ W++++D++VTR +
Sbjct: 273 LDLKPYLS--EPTGGPLPYALYAVLVHDGATSNSGHYFCCVKAGHGKWYKMDDTKVTRCD 330
Query: 401 EEFVLSQDAYILFYAKQ 417
VL+++AY+LFY +Q
Sbjct: 331 VTSVLNENAYVLFYVQQ 347
>gi|300681222|sp|Q7M764.2|U17L2_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17;
Short=USP17; AltName: Full=Deubiquitinating enzyme
17-like protein 2; AltName: Full=Deubiquitinating
protein 3; Short=DUB-3; AltName: Full=Deubiquitinating
protein 6; AltName: Full=Ubiquitin carboxyl-terminal
hydrolase 17-like protein 2; AltName: Full=Ubiquitin
thioesterase 17-like protein 2; AltName:
Full=Ubiquitin-specific-processing protease 17-like
protein 2
Length = 540
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 112/317 (35%), Positives = 182/317 (57%), Gaps = 16/317 (5%)
Query: 103 PTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHI 162
P G G GL+N GN+C++NA LQC THT PL + S +H + C + EG C +CA+ H+
Sbjct: 80 PQGPGCGLQNTGNSCYLNAALQCLTHTPPLADYMLSQEHSQTC-CSPEG-CKMCAMEAHV 137
Query: 163 ELSL--ASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDE 220
SL + SG V+ P ++ ++S F ++QQEDAHEFL L+ + CL + +
Sbjct: 138 TQSLLHSHSGDVMKPSQI------LTSAFHKHQQEDAHEFLMFTLETMHESCLQVHRQSD 191
Query: 221 SLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKL 280
+ Q + + +FGG S+++C +C S T++P +D+ L+I S+ AL K
Sbjct: 192 P-TPQDTSPIHDIFGGWWRSQIKCLHCQGTSHTFDPFLDVPLDISSAQSVNQALWDTGKS 250
Query: 281 EKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE 340
E++ E + C +C++++ K L + P V LKRF K+D+ V +P
Sbjct: 251 EELLG-ENAYYCGRCRQKMPASKTLHVHIAPKVLLLVLKRFSAFTGN--KLDRKVSYPEF 307
Query: 341 LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVE 400
LDLKPY S + + L Y LYA++ H G++ GHYF +++ W++++D++VTR +
Sbjct: 308 LDLKPYLS--EPTGGPLPYALYAVLVHDGATSNSGHYFCCVKAGHGKWYKMDDTKVTRCD 365
Query: 401 EEFVLSQDAYILFYAKQ 417
VL+++AY+LFY +Q
Sbjct: 366 VTSVLNENAYVLFYVQQ 382
>gi|379698859|ref|NP_001243902.1| ubiquitin carboxyl-terminal hydrolase 17 [Mus musculus]
Length = 540
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 112/317 (35%), Positives = 182/317 (57%), Gaps = 16/317 (5%)
Query: 103 PTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHI 162
P G G GL+N GN+C++NA LQC THT PL + S +H + C + EG C +CA+ H+
Sbjct: 80 PQGPGCGLQNTGNSCYLNAALQCLTHTPPLADYMLSQEHSQTC-CSPEG-CKMCAMEAHV 137
Query: 163 ELSL--ASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDE 220
SL + SG V+ P ++ ++S F ++QQEDAHEFL L+ + CL + +
Sbjct: 138 TQSLLHSHSGDVMKPSQI------LTSAFHKHQQEDAHEFLMFTLETMHESCLQVHRQSD 191
Query: 221 SLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKL 280
+ Q + + +FGG S+++C +C S T++P +D+ L+I S+ AL K
Sbjct: 192 P-TPQDTSPIHDIFGGWWRSQIKCLHCQGTSHTFDPFLDVPLDISSAQSVNQALWDTGKS 250
Query: 281 EKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE 340
E++ E + C +C++++ K L + P V LKRF K+D+ V +P
Sbjct: 251 EELLG-ENAYYCGRCRQKMPASKTLHVHIAPKVLLLVLKRFSAFTGN--KLDRKVSYPEF 307
Query: 341 LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVE 400
LDLKPY S + + L Y LYA++ H G++ GHYF +++ W++++D++VTR +
Sbjct: 308 LDLKPYLS--EPTGGPLPYALYAVLVHDGATSNSGHYFCCVKAGHGKWYKMDDTKVTRCD 365
Query: 401 EEFVLSQDAYILFYAKQ 417
VL+++AY+LFY +Q
Sbjct: 366 VTSVLNENAYVLFYVQQ 382
>gi|330822492|ref|XP_003291685.1| hypothetical protein DICPUDRAFT_6348 [Dictyostelium purpureum]
gi|325078121|gb|EGC31790.1| hypothetical protein DICPUDRAFT_6348 [Dictyostelium purpureum]
Length = 328
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 120/332 (36%), Positives = 194/332 (58%), Gaps = 10/332 (3%)
Query: 88 LLSRPVEKHWPIQIKPTG-VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCD 146
++ +P E H ++ K +GAGL N+GNTCF+N++LQC T++ L + S +H + C
Sbjct: 4 VIFKPEELHPLMKWKSIANIGAGLYNIGNTCFMNSVLQCLTYSSALANYMISGEHSKNC- 62
Query: 147 GATEGFCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLD 206
+ FCV C+L HI S ++GK ++P + N+ ++ F+ +QED+HEF ++D
Sbjct: 63 -TNKSFCVFCSLEIHIIASHQATGKSITPLVIAKNIEKVAPTFRIGRQEDSHEFFCFVID 121
Query: 207 RLESCCLDSKTKDESLSSQGD--NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEI 264
L+ CL +K S+S + ++ +FGG L S+++C C S+T++ +DL +EI
Sbjct: 122 SLQKVCL-AKFPKGSISPRDSMTTVIGSIFGGYLRSQVKCTVCQYESNTFDEFMDLCVEI 180
Query: 265 EDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTD 324
SL L++F K E I D E + C+KCK+ V EK L ++ P V +KRF
Sbjct: 181 NQANSLTKGLQNFVKPE-ILDGENGYKCKKCKKLVKAEKSLQIEISPPVLTVQIKRFSFL 239
Query: 325 GSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSS 384
SY K +KH++F LDL PY + Q +D + Y L +++ H+G S GHY+ Y++ S
Sbjct: 240 NSYGGKDNKHIQFCQTLDLSPYMT--QTNDHSI-YDLNSVLVHLGDSTNSGHYYCYVKGS 296
Query: 385 PDTWHRLNDSRVTRVEEEFVLSQDAYILFYAK 416
W++++DS V++V + VL AY+LFY K
Sbjct: 297 NGVWYKMDDSMVSQVSLQTVLRSKAYMLFYTK 328
>gi|392337921|ref|XP_001074389.3| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase DUB-1 [Rattus norvegicus]
Length = 549
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 113/313 (36%), Positives = 187/313 (59%), Gaps = 16/313 (5%)
Query: 107 GAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSL 166
G+GL+N+GN+C++NA+LQC THT PL + S +H + C EG C +CA+ H+ SL
Sbjct: 95 GSGLQNIGNSCYLNAVLQCLTHTPPLADYMLSQEHSQRC-CYPEG-CKMCAMEAHVTQSL 152
Query: 167 --ASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSS 224
+ SG V+ P ++ ++S F +++QEDAHEFL L+ + CL + E+ SS
Sbjct: 153 LHSHSGGVMKPSEI------LTSTFHKHRQEDAHEFLMFTLNAMHESCLRGCKQSET-SS 205
Query: 225 QGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIE 284
+ +++ +FGG + S+++C +C D+Y+P ++L L+I S+ ALE KLE+++
Sbjct: 206 KDSSLIYDIFGGQMRSQIKCHHCQGTLDSYDPFLNLFLDICSAQSVKQALEDLVKLEELQ 265
Query: 285 DPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLK 344
+ + C +C+E++ K + V L R G K+++ V +P LDL+
Sbjct: 266 G-DNAYYCGRCREKMPASKTTKVQTASKVLLLVLNRSYDFGG--DKLNRVVSYPEYLDLQ 322
Query: 345 PYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFV 404
PY S Q + L Y LYA++ H G + + GHYF Y+++S W++++DS+VTR + V
Sbjct: 323 PYLS--QPTAGPLPYALYAVLVHDGVTCSSGHYFCYVKASHGKWYKMDDSKVTRCDVSSV 380
Query: 405 LSQDAYILFYAKQ 417
LS+ AY+LFY +Q
Sbjct: 381 LSEPAYLLFYVQQ 393
>gi|384495371|gb|EIE85862.1| hypothetical protein RO3G_10572 [Rhizopus delemar RA 99-880]
Length = 493
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 124/350 (35%), Positives = 182/350 (52%), Gaps = 35/350 (10%)
Query: 74 PISSSYGRYNWGSSLLSRPVEKHWPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLV 133
P S RY+W S +G GL N NTCF+NA+L C T+T PL
Sbjct: 59 PFDRSQLRYSWSFS----------------RNLGPGLVNAFNTCFLNAVLCCLTYTAPLT 102
Query: 134 QALRSFDHPRPCDGATEGFCVICALRDHIELSLASSGKVL-----SPRKLVDNLNYISSF 188
Q L + +H + C GFC +CA+ +H+ ++ ++ SP NL ISS
Sbjct: 103 QYLLTDNHKKNC--TIHGFCGLCAMSEHVNKCFTTAKSLMRFSAISPNYFTSNLKKISSN 160
Query: 189 FQRYQQEDAHEFLQCLLDRLESCC--LDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCN 246
+QEDAHEF LLD L+SK + + +V +FGG L S++ C N
Sbjct: 161 LLLGRQEDAHEFFMFLLDAFTKSYTPLNSKLTPQE---EDAGLVHTIFGGKLQSQVTCNN 217
Query: 247 CGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLM 306
C + S++Y+ +DLS++I S+ +AL F + + I+ + C+ CK++V KQ+
Sbjct: 218 CKANSNSYDRFLDLSVQINGEKSIQNALSRFIEADTIDG----YNCDACKQKVRAYKQMT 273
Query: 307 LDKVPSVAAFHLKRFKTD--GSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAI 364
++VP HLKRF+ D + + KI K V+FP LD+ PY S + +Y LYA+
Sbjct: 274 ANEVPHNLVIHLKRFEYDMYSNGMRKIHKSVKFPETLDMAPYISKEKKVQAA-EYKLYAV 332
Query: 365 VEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFY 414
+ H GSS GHYF+Y+++ W +ND V V VLSQ AY+LFY
Sbjct: 333 LVHAGSSCDAGHYFAYVKNPQGGWLLINDETVHPVSINEVLSQRAYMLFY 382
>gi|359321530|ref|XP_851647.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Canis lupus familiaris]
Length = 535
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 116/313 (37%), Positives = 174/313 (55%), Gaps = 15/313 (4%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL+N+GNTC++NA LQC T+T PL + S H C T C++C L+ H+
Sbjct: 78 VGAGLQNMGNTCYVNATLQCLTYTEPLASYMLSQQHGTTCRRQTS--CMLCTLQAHLTRV 135
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
L G+V + L + + F R++QEDAHE+L +LD ++ CL + Q
Sbjct: 136 LCHPGRV------LRPLPLLLAAFHRHKQEDAHEYLMFILDAMQQACLPEDKLSDPERPQ 189
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
++Q++FGG S++QC +C S T EP +D+SL+I D S+ ALE K E +E
Sbjct: 190 DSTLIQQLFGGYWRSQIQCLHCQGISSTLEPYLDISLDIGDAHSVSQALEQLVKPELLEG 249
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKT-DGSYVVKIDKHVEFPLELDLK 344
E + C KC E+V K L L P V L+RF G+ K+ K V++P LDL+
Sbjct: 250 -ENAYHCSKCLEKVPASKVLTLHTSPKVLILVLRRFSNLTGN---KMTKEVQYPERLDLQ 305
Query: 345 PYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFV 404
Y S + L Y LYA++ H G S GHYF +I++ W++++D++V+ +
Sbjct: 306 HYLS--EQRAGPLVYVLYAVLVHAGRSCHSGHYFCFIKAGNGQWYKMDDAKVSSCDVICA 363
Query: 405 LSQDAYILFYAKQ 417
L Q AY+LFY ++
Sbjct: 364 LRQPAYVLFYMQK 376
>gi|32402146|gb|AAP81046.1| deubiquitinating enzyme 1A [Mus musculus]
Length = 465
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 117/317 (36%), Positives = 182/317 (57%), Gaps = 17/317 (5%)
Query: 103 PTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHI 162
P G G GL+N GN+C++NA LQC THT PL + S +H + C + EG C +CA+ H+
Sbjct: 46 PQGPGCGLQNTGNSCYLNAALQCLTHTPPLADYMLSQEHSQTC-CSPEG-CKMCAMEAHV 103
Query: 163 ELSL--ASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDE 220
SL SG V+ P + N S+F +R +EDAHEFL L+ + CL + E
Sbjct: 104 TQSLLHTHSGDVMKPSQ-----NLTSAFHKR--KEDAHEFLMFTLETMHESCLQVHRQSE 156
Query: 221 SLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKL 280
+S+ + + +FGG S+++C +C S +Y+P +D+ L+I V S+ AL+ K
Sbjct: 157 P-TSEDSSPIHDIFGGWWRSQIKCHHCQGTSYSYDPFLDIPLDISSVQSVKQALQDTEKA 215
Query: 281 EKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE 340
E++ E + C +C+++ K L L P V LKRF GS K+D+ V +P
Sbjct: 216 EELCG-ENSYYCGRCRQKKPASKTLKLYSAPKVLMLVLKRF--SGSMGKKLDRKVSYPEF 272
Query: 341 LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVE 400
LDLKPY S Q + L Y LYA++ H G++ GHYF +++ W++++D++VT +
Sbjct: 273 LDLKPYLS--QPTGGPLPYALYAVLVHEGATCHSGHYFCCVKAGHGKWYKMDDTKVTSCD 330
Query: 401 EEFVLSQDAYILFYAKQ 417
VL+++AY+LFY +Q
Sbjct: 331 VTSVLNENAYVLFYVQQ 347
>gi|392344528|ref|XP_001071809.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein 2
[Rattus norvegicus]
Length = 832
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 113/313 (36%), Positives = 187/313 (59%), Gaps = 16/313 (5%)
Query: 107 GAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSL 166
G+GL+N+GN+C++NA+LQC THT PL + S +H + C EG C +CA+ H+ SL
Sbjct: 378 GSGLQNIGNSCYLNAVLQCLTHTPPLADYMLSQEHSQRC-CYPEG-CKMCAMEAHVTQSL 435
Query: 167 --ASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSS 224
+ SG V+ P ++ ++S F +++QEDAHEFL L+ + CL + E+ SS
Sbjct: 436 LHSHSGGVMKPSEI------LTSTFHKHRQEDAHEFLMFTLNAMHESCLRGCKQSET-SS 488
Query: 225 QGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIE 284
+ +++ +FGG + S+++C +C D+Y+P ++L L+I S+ ALE KLE+++
Sbjct: 489 KDSSLIYDIFGGQMRSQIKCHHCQGTLDSYDPFLNLFLDICSAQSVKQALEDLVKLEELQ 548
Query: 285 DPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLK 344
+ + C +C+E++ K + V L R G K+++ V +P LDL+
Sbjct: 549 G-DNAYYCGRCREKMPASKTTKVQTASKVLLLVLNRSYDFGG--DKLNRVVSYPEYLDLQ 605
Query: 345 PYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFV 404
PY S Q + L Y LYA++ H G + + GHYF Y+++S W++++DS+VTR + V
Sbjct: 606 PYLS--QPTAGPLPYALYAVLVHDGVTCSSGHYFCYVKASHGKWYKMDDSKVTRCDVSSV 663
Query: 405 LSQDAYILFYAKQ 417
LS+ AY+LFY +Q
Sbjct: 664 LSEPAYLLFYVQQ 676
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 111/185 (60%), Gaps = 14/185 (7%)
Query: 107 GAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSL 166
G+GL+N+GN+C++NA+LQC THT PL + S +H + C EG C +CA+ H+ SL
Sbjct: 50 GSGLQNIGNSCYLNAVLQCLTHTPPLADYMLSQEHSQRC-CYPEG-CKMCAMEAHVTQSL 107
Query: 167 --ASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSS 224
+ SG V+ P ++ ++S F +++QED+HEFL L+ + CL + E+ SS
Sbjct: 108 LHSHSGGVMKPSEI------LTSTFHKHRQEDSHEFLMFTLNAMHESCLRGCKQSET-SS 160
Query: 225 QGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSAL---ESFTKLE 281
+ +++ +FGG + S+++C +C D+Y+P ++L L+I S+ AL + LE
Sbjct: 161 KDSSLIYDIFGGQMRSQIKCHHCQGTLDSYDPFLNLFLDICSAQSVKQALNINQYGIHLE 220
Query: 282 KIEDP 286
+ DP
Sbjct: 221 EYTDP 225
>gi|359324297|ref|XP_003640330.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Canis lupus familiaris]
Length = 645
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 132/391 (33%), Positives = 199/391 (50%), Gaps = 32/391 (8%)
Query: 40 HLHPSNHPLTLTDLDKDQNNDDDDDYEEIYRDTRPISSSYGRYNWGSSLLSRPVEKHWPI 99
HLHPS P + K Q+ E++ S R + S LS P + P
Sbjct: 115 HLHPSEEP-QFSASPKPQSYWSRRGGAEVHGG----PSVPERTSPASKTLSSPTDPLAPA 169
Query: 100 Q--IKPTG----------VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDG 147
+ PT VGAGL+N+GNTC++NA LQC T+T PL + S H C
Sbjct: 170 SAGLPPTKTPLSWKSLSQVGAGLQNMGNTCYVNATLQCLTYTEPLASYMLSQQHGTTCRR 229
Query: 148 ATEGFCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDR 207
T C++C L+ H+ L G+V + L + + F R++QEDAHE+L +LD
Sbjct: 230 QTS--CMLCTLQTHLMRVLCHPGRV------LRPLPLLLAAFHRHKQEDAHEYLMFILDA 281
Query: 208 LESCCLDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDV 267
++ CL + Q ++Q++FGG S++QC +C S T EP +D+SL+I D
Sbjct: 282 MQQACLPEDKLSDPECPQDSTLIQQLFGGYWRSQIQCLHCQGISSTLEPYLDISLDIGDA 341
Query: 268 GSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK-TDGS 326
S+ ALE K E +E E + C KC E+V K L L P V L+RF G+
Sbjct: 342 HSVSQALEQLVKPELLEG-ENAYHCSKCLEKVPASKVLTLHTSPKVLILVLRRFSDLTGN 400
Query: 327 YVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPD 386
K+ K V++P LD++ Y S + L Y LYA++ H G S GHYF ++++
Sbjct: 401 ---KMTKEVQYPERLDMQHYLS--EQRAGPLVYVLYAVLVHAGRSCHSGHYFCFVKAGNG 455
Query: 387 TWHRLNDSRVTRVEEEFVLSQDAYILFYAKQ 417
W++++D++V+ + L Q AY+LFY ++
Sbjct: 456 QWYKMDDAKVSACDVTCALRQPAYVLFYMQK 486
>gi|299470394|emb|CBN80155.1| Ubiquitin-specific protease 16 [Ectocarpus siliculosus]
Length = 1055
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 121/332 (36%), Positives = 178/332 (53%), Gaps = 28/332 (8%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQ-ALRSF----------DHPRPCDGATEGFC- 153
+G GL NLGNTCF+NA LQC ++ PL Q L+ F PRP G E F
Sbjct: 67 MGPGLRNLGNTCFLNATLQCLSYLPPLAQHLLKGFYGQGPQGIASRGPRPMGGFRE-FTK 125
Query: 154 --VICALRDH---IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRL 208
++ A+ H + + +SP+ LV NL I F++ +QEDAHEFL+ LLD++
Sbjct: 126 VEILAAMEQHTKQVHQGQFTGLGAISPKVLVQNLRMIGRQFRQGRQEDAHEFLRHLLDKM 185
Query: 209 ESCCLDSKTKDESLSSQ--GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEI-E 265
C L + S ++ + R+FGG L S+L+C CG CSDT++P +DLS+++
Sbjct: 186 VDCYLKRRGVKSSAPNRLAETTPINRIFGGYLRSRLKCTKCGHCSDTFDPFMDLSMDLSR 245
Query: 266 DVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDG 325
V S+ AL F E++ ++ C CK+ V EK L + K P+ LKRF
Sbjct: 246 GVRSIDVALRRFVATERLGS-GNEWRCGGCKKPVQAEKSLSVFKPPNALVLQLKRFVFT- 303
Query: 326 SYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSP 385
KI H++F L+L SG + S + Y L +V H G S + GHY++Y+RS
Sbjct: 304 RKASKIKDHIQFADVLNLS--VSGPERSAL---YDLTGVVVHAGGSMSSGHYYAYVRSCA 358
Query: 386 DTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQ 417
W R++D V++V+ E VL AY+LFY ++
Sbjct: 359 GMWSRMDDCSVSKVKRETVLRDQAYVLFYTRR 390
>gi|301762222|ref|XP_002916532.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42-like
[Ailuropoda melanoleuca]
Length = 1186
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 105/272 (38%), Positives = 164/272 (60%), Gaps = 10/272 (3%)
Query: 147 GATEGFCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLD 206
G EGFC++C ++ HI +L++ G V+ P +++ + I+ F+ QEDAHEFLQ +D
Sbjct: 6 GHAEGFCMMCTMQAHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVD 65
Query: 207 RLESCCLDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIED 266
++ CL+ K + +Q +V ++FGG L S+++C NC SDT++P +D++LEI+
Sbjct: 66 AMQKACLNGSNKLDR-HTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKA 124
Query: 267 VGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK--TD 324
S+ ALE F K E++ D E + C KCK+ V K+ + + +V LKRF T
Sbjct: 125 AQSVNKALEQFVKPEQL-DGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTG 183
Query: 325 GSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSS 384
G KI K V++P LD++PY S Q + + Y LYA++ H G + GHYF YI++S
Sbjct: 184 G----KIAKDVKYPEYLDIRPYMS--QPNGEPIIYVLYAVLVHTGFNCHAGHYFCYIKAS 237
Query: 385 PDTWHRLNDSRVTRVEEEFVLSQDAYILFYAK 416
W+++NDS V+ + VLSQ AY+LFY +
Sbjct: 238 NGLWYQMNDSIVSTSDIRSVLSQQAYVLFYIR 269
>gi|336373694|gb|EGO02032.1| hypothetical protein SERLA73DRAFT_49755 [Serpula lacrymans var.
lacrymans S7.3]
Length = 337
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 111/316 (35%), Positives = 168/316 (53%), Gaps = 11/316 (3%)
Query: 103 PTG--VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRD 160
P+G VG+GL N GNTCF+N+ LQC HT PL+ + + PC T GFC+ C LR
Sbjct: 31 PSGCSVGSGLHNTGNTCFLNSALQCLLHTPPLLHIISAHSKADPCRVKT-GFCMSCNLRQ 89
Query: 161 HIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDE 220
+ + ++ + P + L I+ +R +QED+HEFL+ +D L+ CL
Sbjct: 90 -VAVEAHATKRAFVPYPITTKLQTIAKHMKRGRQEDSHEFLRYAIDALQKSCLAGYPPKL 148
Query: 221 SLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKL 280
V R+FGG L S++ C C SDT++ ++DLSL+I V S+ AL F +
Sbjct: 149 DPKVAETTWVHRIFGGHLRSRVTCRECQHNSDTFDSILDLSLDIYGVASIKEALRKFVAV 208
Query: 281 EKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE 340
+ ++ + K+ CEKCK+ V EK+ + P V HLKRF G KI +V++
Sbjct: 209 DYLKGSD-KYKCEKCKKAVIAEKRFTVHDAPVVLTVHLKRFSPLGR---KIGHYVKYDDR 264
Query: 341 LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVE 400
L L+P S GQ Y LY ++ H G P GHY+++++ W+ +ND V+
Sbjct: 265 LGLQPIMSEGQFGP---SYSLYGVICHAGGGPNSGHYYAHVKGGNGQWYEMNDGMVSSQR 321
Query: 401 EEFVLSQDAYILFYAK 416
V ++AY+LFY +
Sbjct: 322 NSPVGMKNAYMLFYIR 337
>gi|325190752|emb|CCA25244.1| ubiquitinspecific protease putative [Albugo laibachii Nc14]
Length = 699
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 119/329 (36%), Positives = 177/329 (53%), Gaps = 23/329 (6%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICAL-----RD 160
+G G NLGNTC++N++LQC +T LVQ L + FC + ++ R
Sbjct: 98 IGPGFSNLGNTCYLNSVLQCLCYTPCLVQYLLQNRNTISKKKQVNSFCALQSIVNLFARV 157
Query: 161 HIELSLASS-----------GKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLE 209
H+E+ S KV+ PR V N+ +S F+ +QEDAHEF + LLD ++
Sbjct: 158 HLEVKSVQSQNAFHNKSLQHAKVMQPRDFVMNVRLLSKHFRIGRQEDAHEFFRSLLDSIQ 217
Query: 210 SCCLDS-KTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIED-V 267
L + + +S ++ R+FGG L S L+C C S+ E DLSLEI + +
Sbjct: 218 KSSLQAARFASDSDPLASTTMIPRIFGGKLKSSLKCVKCSYVSEHLEDFQDLSLEIHNGI 277
Query: 268 GSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSY 327
++ A++ FT +EK+ D + C KC+ EK L + + P+V LKRF DG
Sbjct: 278 QTITEAIDHFTAVEKL-DETNAWKCTKCRLFNRAEKGLTIAEYPNVLVIQLKRF--DGFL 334
Query: 328 VVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDT 387
K+ KH+ FPLEL L P T ++ + KY LYAI+ H G S CGHY+++++ S
Sbjct: 335 GGKLKKHISFPLELAL-PNTCKSKSQN-RTKYTLYAILVHAGHSTDCGHYYAFVKGSSRQ 392
Query: 388 WHRLNDSRVTRVEEEFVLSQDAYILFYAK 416
W+ +ND V V + VLSQ AY+LFY++
Sbjct: 393 WYEMNDDSVRWVSADTVLSQRAYMLFYSR 421
>gi|359324293|ref|XP_003640328.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Canis lupus familiaris]
Length = 535
Score = 202 bits (513), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 133/391 (34%), Positives = 199/391 (50%), Gaps = 32/391 (8%)
Query: 40 HLHPSNHPLTLTDLDKDQNNDDDDDYEEIYRDTRPISSSYGRYNWGSSLLSRPVEKHWPI 99
HLHPS P + K Q+ E++ S R + S LS P + P
Sbjct: 5 HLHPSEEP-QFSASPKPQSYWSRRGGAEVHGG----PSVPERTSPASKTLSSPTDPLAPA 59
Query: 100 Q--IKPTG----------VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDG 147
+ PT VGAGL+N+GNTC++NA LQC T+T PL + S H C
Sbjct: 60 SAGLPPTKTPLSWKSLSQVGAGLQNMGNTCYVNATLQCLTYTEPLASYMLSQQHGTTCRR 119
Query: 148 ATEGFCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDR 207
T C++C L+ H+ L G+VL L + + F R++QEDAHE+L +LD
Sbjct: 120 QTS--CMLCTLQAHLMRVLCHPGRVLR------PLPLLLAAFHRHKQEDAHEYLMFILDA 171
Query: 208 LESCCLDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDV 267
++ CL + Q ++Q++FGG S++QC +C S T EP +D+SL+I D
Sbjct: 172 MQQACLPEDKLSDPECPQDSTLIQQLFGGYWRSQIQCLHCQGISSTLEPYLDISLDIGDA 231
Query: 268 GSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK-TDGS 326
S+ ALE K E +E E + C KC E+V K L L P V L+RF G+
Sbjct: 232 HSVSQALEQLVKPELLEG-ENAYHCSKCLEKVPASKVLTLHTSPKVLILVLRRFSDLTGN 290
Query: 327 YVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPD 386
K+ K V++P LD++ Y S + L Y LYA++ H G S GHYF ++++
Sbjct: 291 ---KMTKEVQYPERLDMQHYLS--EQRAGPLVYVLYAVLVHAGRSCHSGHYFCFVKAGNG 345
Query: 387 TWHRLNDSRVTRVEEEFVLSQDAYILFYAKQ 417
W++++D++V+ + L Q AY+LFY ++
Sbjct: 346 QWYKMDDAKVSACDVTCALRQPAYVLFYMQK 376
>gi|328766417|gb|EGF76471.1| hypothetical protein BATDEDRAFT_28405 [Batrachochytrium
dendrobatidis JAM81]
Length = 525
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 115/313 (36%), Positives = 177/313 (56%), Gaps = 14/313 (4%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
+G GL N+GNTCF+N++LQC T+T PL + L H C T+ FC +C + H++
Sbjct: 88 IGPGLVNMGNTCFLNSVLQCMTYTPPLAEFLLRGVHSSSCR--TKSFCAMCVMESHVKHC 145
Query: 166 L-ASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSS 224
L SS K + PR V+NL IS + +QEDAHEF + L++ L++ D +T + +L+
Sbjct: 146 LQTSSEKPIQPRLFVENLRKISRHIRLGRQEDAHEFTRFLIEGLKNGEGD-RTPEATLA- 203
Query: 225 QGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIE 284
+F G L S++ C C S S+T +PL+D+SL+I+ S+ AL FT E +
Sbjct: 204 ------HAIFSGKLQSQITCLKCKSTSNTLDPLMDISLDIQKCASVEDALARFTTSELLH 257
Query: 285 DPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLK 344
+ ++ C KC KQ+ + + P V LKRF KI V F L+L
Sbjct: 258 K-QNQYRCSKCNALRDAYKQITVLEPPVVLTVQLKRFGFGHRVGSKISSPVLFKTVLNLY 316
Query: 345 PYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFV 404
P+ S Q++ + YHL+A++ H G S GHY+ ++++ W+ +NDS V +V E+ V
Sbjct: 317 PFMS--QSTKQNVLYHLFAVLVHSGGSCHSGHYYCFVKAPDGCWYLMNDSLVQQVSEKTV 374
Query: 405 LSQDAYILFYAKQ 417
L+Q AY+LFY +Q
Sbjct: 375 LAQSAYMLFYVRQ 387
>gi|51969076|dbj|BAD43230.1| unknown protein [Arabidopsis thaliana]
Length = 631
Score = 201 bits (512), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 122/333 (36%), Positives = 180/333 (54%), Gaps = 15/333 (4%)
Query: 103 PTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHI 162
P GL N GN+CF N ILQC + T PLV L H R C +C +C + H+
Sbjct: 163 PELAPCGLMNCGNSCFANVILQCLSWTRPLVAYLLEKGHKREC--MRNDWCFLCEFQTHV 220
Query: 163 ELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESL 222
E + + S SP ++ L I +QEDAHEF++ +D ++S CLD ++ +
Sbjct: 221 ERA-SQSRFPFSPMNIISRLTNIGGTLGYGRQEDAHEFMRYAIDMMQSVCLDEFGGEKIV 279
Query: 223 --SSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE-DVGSLGSALESFTK 279
SQ ++Q +FGG L S++QC C SD YE ++DL +E+ D GSL L+ FT
Sbjct: 280 PPRSQETTLIQYIFGGLLQSQVQCTVCNHVSDQYENMMDLIVEMHGDAGSLEECLDQFTA 339
Query: 280 LEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPL 339
E + + + C++C + V K+L + + P++ LKR++ G K++K + FP
Sbjct: 340 EEWLHG-DNMYKCDRCSDYVKACKRLTIRRAPNILTIALKRYQ--GGRYGKLNKRISFPE 396
Query: 340 ELDLKPYTS-GGQNSDVELKYHLYAIVEH--MGSSPTCGHYFSYIRSSPDTWHRLNDSRV 396
LDL PY S GG SDV Y LYA++ H M ++ HY YI+ W+R++DS +
Sbjct: 397 TLDLNPYMSEGGDGSDV---YKLYAVIVHLDMLNASFFSHYICYIKDFCGNWYRIDDSEI 453
Query: 397 TRVEEEFVLSQDAYILFYAKQGTEWVSSLLEAE 429
VE E VLSQ AY+L Y++ SS L +E
Sbjct: 454 ESVELEDVLSQRAYMLLYSRIQARSSSSCLRSE 486
>gi|356554161|ref|XP_003545417.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Glycine
max]
Length = 729
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 122/350 (34%), Positives = 188/350 (53%), Gaps = 27/350 (7%)
Query: 85 GSSLLSRPVEKHWPIQI------------KPTGVGAGLENLGNTCFINAILQCFTHTLPL 132
G+ +SRP+++ + KP GL N GN+CF N +LQC + T PL
Sbjct: 148 GAGAISRPIKQAKDVLFSYDEFVKFFNWDKPGFPPCGLLNCGNSCFANVVLQCLSFTKPL 207
Query: 133 VQALRSFDHPRPCDGATEGFCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRY 192
V L H R C + +C +C +H+E + SS + SP ++ L I
Sbjct: 208 VAYLLEKGHRREC--SCNDWCFLCEFENHVERTRLSS-QAFSPMNILSRLPNIGGTLGYG 264
Query: 193 QQEDAHEFLQCLLDRLESCCLDSKTKDESL--SSQGDNIVQRVFGGCLISKLQCCNCGSC 250
+QEDAHEF++ +D ++S CLD ++++ + Q ++Q +FGG L S++ C C
Sbjct: 265 RQEDAHEFMRFSIDTMQSVCLDEFGGEKAVPPNLQETTLIQHIFGGRLQSEVICTKCNKI 324
Query: 251 SDTYEPLIDLSLEIE-DVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDK 309
S+ YE ++DL++EI D SL L+ FT E++ D E + CE CK+ V K+L +
Sbjct: 325 SNQYENMMDLTVEIHGDAASLEECLDQFTARERL-DGENMYKCEGCKDYVKAWKRLTVKC 383
Query: 310 VPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPYTS-GGQNSDVELKYHLYAIVEH- 367
P++ LKRF++ K++K + FP L+L PY S G SD+ Y LY +V H
Sbjct: 384 APNILTIALKRFQS--GRFGKLNKRISFPETLNLSPYMSEAGDGSDI---YKLYGVVVHI 438
Query: 368 -MGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAK 416
M ++ GHY YI+ W+R++D +V VE E VLSQ AY+L Y++
Sbjct: 439 DMLNASFFGHYICYIKDFQGNWYRIDDWKVMTVEVEEVLSQGAYMLLYSR 488
>gi|359321516|ref|XP_853986.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Canis lupus familiaris]
Length = 573
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 115/313 (36%), Positives = 174/313 (55%), Gaps = 15/313 (4%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL+N+GNTC++NA LQC T+T PL + S H C T C++C L+ H+
Sbjct: 78 VGAGLQNMGNTCYVNATLQCLTYTEPLASYMLSQQHGTTCRRQTS--CMLCTLQTHLMRV 135
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
L G+VL L + + F R++QEDAHE+L +LD ++ CL + Q
Sbjct: 136 LCHPGRVLR------PLPLLLAAFHRHKQEDAHEYLMFILDAMQQACLPEDKLSDPECPQ 189
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
++Q++FGG S++QC +C S T EP +D+SL+I D S+ ALE K E +E
Sbjct: 190 DSTLIQQLFGGYWRSQIQCLHCQGISSTLEPYLDISLDIGDAHSVSQALEQLVKPELLEG 249
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK-TDGSYVVKIDKHVEFPLELDLK 344
E + C KC E+V K L L P V L+RF G+ K+ K V++P LD++
Sbjct: 250 -ENAYHCSKCLEKVPASKVLTLHTSPKVLILVLRRFSDLTGN---KMTKEVQYPERLDMQ 305
Query: 345 PYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFV 404
Y S + L Y LYA++ H G S GHYF ++++ W++++D++V+ +
Sbjct: 306 HYLS--EQRAGPLVYVLYAVLVHAGRSCHSGHYFCFVKAGNGQWYKMDDAKVSACDVTCA 363
Query: 405 LSQDAYILFYAKQ 417
L Q AY+LFY ++
Sbjct: 364 LRQPAYVLFYMQK 376
>gi|297679837|ref|XP_002817723.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Pongo abelii]
Length = 1176
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 104/270 (38%), Positives = 163/270 (60%), Gaps = 10/270 (3%)
Query: 149 TEGFCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRL 208
EGFC++C ++ HI +L++ G V+ P +++ + I+ F+ QEDAHEFLQ +D +
Sbjct: 9 AEGFCMMCTMQAHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAM 68
Query: 209 ESCCLDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVG 268
+ CL+ K + +Q +V ++FGG L S+++C NC SDT++P +D++LEI+
Sbjct: 69 QKACLNGSNKLDR-HTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQ 127
Query: 269 SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK--TDGS 326
S+ ALE F K E++ D E + C KCK+ V K+ + + +V LKRF T G
Sbjct: 128 SVNKALEQFVKPEQL-DGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG- 185
Query: 327 YVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPD 386
KI K V++P LD++PY S Q + + Y LYA++ H G + GHYF YI++S
Sbjct: 186 ---KIAKDVKYPEYLDIRPYMS--QPNGEPIVYVLYAVLVHTGFNCHAGHYFCYIKASNG 240
Query: 387 TWHRLNDSRVTRVEEEFVLSQDAYILFYAK 416
W+++NDS V+ + VLSQ AY+LFY +
Sbjct: 241 LWYQMNDSIVSTSDIRSVLSQQAYVLFYIR 270
>gi|109462598|ref|XP_001074163.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase DUB-1-like [Rattus
norvegicus]
Length = 504
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 112/316 (35%), Positives = 188/316 (59%), Gaps = 22/316 (6%)
Query: 107 GAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSL 166
G+GL+N+GN+C++NA+LQC THT PL + S +H + C EG C +CA+ H+ SL
Sbjct: 50 GSGLQNIGNSCYLNAVLQCLTHTPPLADYMLSQEHSQRC-CYPEG-CNMCAMEAHVTQSL 107
Query: 167 --ASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSS 224
+ SG V+ P ++ ++S F +++QEDAHEFL L+ + CL + E+ +S
Sbjct: 108 LHSHSGGVMKPSEI------LTSTFHKHRQEDAHEFLMFTLNTMHESCLRGCKQSET-TS 160
Query: 225 QGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIE 284
+ +++ +FGG + S+++C +C D+Y+P ++L L+I S+ ALE K+E+++
Sbjct: 161 KDSSLIYDIFGGQMRSQIKCHHCQGTLDSYDPFLNLFLDICSAQSVKQALEDLVKVEELQ 220
Query: 285 DPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKR---FKTDGSYVVKIDKHVEFPLEL 341
+ + C +C+E++ K + V L R F D K+++ V +P L
Sbjct: 221 G-DNAYYCGRCREKMPASKTTKVQTASKVLLLVLNRSYDFGGD-----KLNRVVSYPEYL 274
Query: 342 DLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEE 401
DL+PY S Q + L Y LYA++ H G + + GHYF Y+++S W++++DS+VTR +
Sbjct: 275 DLQPYLS--QPTAGPLPYALYAVLVHDGVTCSSGHYFCYVKASHGKWYKMDDSKVTRCDV 332
Query: 402 EFVLSQDAYILFYAKQ 417
VLS+ AY+LFY +Q
Sbjct: 333 SSVLSEPAYLLFYVQQ 348
>gi|109459181|ref|XP_219062.4| PREDICTED: ubiquitin carboxyl-terminal hydrolase DUB-1-like [Rattus
norvegicus]
Length = 504
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 112/316 (35%), Positives = 188/316 (59%), Gaps = 22/316 (6%)
Query: 107 GAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSL 166
G+GL+N+GN+C++NA+LQC THT PL + S +H + C EG C +CA+ H+ SL
Sbjct: 50 GSGLQNIGNSCYLNAVLQCLTHTPPLADYMLSQEHSQRC-CYPEG-CNMCAMEAHVTQSL 107
Query: 167 --ASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSS 224
+ SG V+ P ++ ++S F +++QEDAHEFL L+ + CL + E+ +S
Sbjct: 108 LHSHSGGVMKPSEI------LTSTFHKHRQEDAHEFLMFTLNTMHESCLRGCKQSET-TS 160
Query: 225 QGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIE 284
+ +++ +FGG + S+++C +C D+Y+P ++L L+I S+ ALE K+E+++
Sbjct: 161 KDSSLIYDIFGGQMRSQIKCHHCQGTLDSYDPFLNLFLDICSAQSVKQALEDLVKVEELQ 220
Query: 285 DPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKR---FKTDGSYVVKIDKHVEFPLEL 341
+ + C +C+E++ K + V L R F D K+++ V +P L
Sbjct: 221 G-DNAYYCGRCREKMPASKTTKVQTASKVLLLVLNRSYDFGGD-----KLNRVVSYPEYL 274
Query: 342 DLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEE 401
DL+PY S Q + L Y LYA++ H G + + GHYF Y+++S W++++DS+VTR +
Sbjct: 275 DLQPYLS--QPTAGPLPYALYAVLVHDGVTCSSGHYFCYVKASHGKWYKMDDSKVTRCDV 332
Query: 402 EFVLSQDAYILFYAKQ 417
VLS+ AY+LFY +Q
Sbjct: 333 SSVLSEPAYLLFYVQQ 348
>gi|332244569|ref|XP_003271445.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
6-like [Nomascus leucogenys]
Length = 399
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 113/315 (35%), Positives = 176/315 (55%), Gaps = 16/315 (5%)
Query: 103 PTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHI 162
P VGAGL+N+GNTC++NA LQC T+T PL + S +H + C C++C ++ HI
Sbjct: 75 PAAVGAGLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCH--RHKCCMLCTMQAHI 132
Query: 163 ELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESL 222
+L G V+ P + +++ F R +QEDAHEFL +D + CL K
Sbjct: 133 TRALHRPGHVIQPSQA------LAAGFHRGKQEDAHEFLMFTVDAMRKACLPG-YKQVDP 185
Query: 223 SSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEK 282
S+ ++ ++FGG S+++C +C SDT++P +D++L+I+ S+ ALE K E+
Sbjct: 186 HSKDTTLIHQIFGGYWRSQIKCLHCQGISDTFDPYLDIALDIQAAQSVKQALEQLVKPEE 245
Query: 283 IEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK-TDGSYVVKIDKHVEFPLEL 341
+ + E + C C ++ K L L V LKRF G+ K+ K+V++P L
Sbjct: 246 L-NGENAYHCGLCLQKAPASKTLTLHTSAKVLILVLKRFSDVTGN---KLAKNVQYPECL 301
Query: 342 DLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEE 401
D++PY S Q + L Y LYA++ H G S GHYFSY+++ W++++ +VT
Sbjct: 302 DMQPYMS--QQNTGPLVYVLYAVLVHAGWSGHNGHYFSYVKAQEGQWYKMDGDQVTASGI 359
Query: 402 EFVLSQDAYILFYAK 416
VLSQ AY LFY +
Sbjct: 360 TSVLSQQAYDLFYIQ 374
>gi|302774793|ref|XP_002970813.1| hypothetical protein SELMODRAFT_171601 [Selaginella moellendorffii]
gi|300161524|gb|EFJ28139.1| hypothetical protein SELMODRAFT_171601 [Selaginella moellendorffii]
Length = 419
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 117/316 (37%), Positives = 179/316 (56%), Gaps = 13/316 (4%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
V GL N GN+C+ N +LQC T PL L H C EG+C +C L DH++ +
Sbjct: 112 VPCGLINCGNSCYANVVLQCLASTRPLAAYLLHGMHQEACQ--REGWCFMCELEDHVQKA 169
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSS- 224
++ SP K++ L I + +QEDAHEF++ +D ++ CLD + +L +
Sbjct: 170 F-NNQMPFSPIKILSRLRSIGNSLGYGRQEDAHEFMRLAVDCMQKICLDEAGGETTLDAR 228
Query: 225 -QGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE-DVGSLGSALESFTKLEK 282
Q ++Q +FGG L S++ CC C S+ YE ++DLS+ I+ +V SL AL+ FT E
Sbjct: 229 TQETTLIQHIFGGYLQSQVVCCQCQQRSNLYENMLDLSVGIQGNVESLEDALKQFTSPEW 288
Query: 283 IEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELD 342
+ D + K+ C++C V +K+L + + P++ LKRF+ G KI+K V FP ELD
Sbjct: 289 L-DGDNKYRCDRCNAYVRAKKRLSVHEAPNILTIALKRFQ--GGKFGKINKKVTFPEELD 345
Query: 343 LKPYTSGGQNSDVELKYHLYAIVEH--MGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVE 400
+ PY SG D Y LYA+V H M ++ GHY Y+R+ W +++DS+V V+
Sbjct: 346 MVPYMSG--TVDTPPAYKLYAVVVHVDMLNASYFGHYVCYVRAGNGAWFKVDDSKVKEVD 403
Query: 401 EEFVLSQDAYILFYAK 416
+ V+SQ AY+L Y +
Sbjct: 404 QIRVMSQKAYMLLYRR 419
>gi|169861600|ref|XP_001837434.1| Usp36 protein [Coprinopsis cinerea okayama7#130]
gi|116501455|gb|EAU84350.1| Usp36 protein [Coprinopsis cinerea okayama7#130]
Length = 637
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 114/349 (32%), Positives = 182/349 (52%), Gaps = 17/349 (4%)
Query: 87 SLLSRPVEKHWPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCD 146
SL ++ WP +G+GL N GNTCF+N+ LQC HT PL++ L H +
Sbjct: 104 SLYPTGIDTSWPPNCN---IGSGLHNTGNTCFLNSALQCLLHTPPLLRVLS--HHKQESC 158
Query: 147 GATEGFCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLD 206
GFC+ CALR S SS +P ++ L I+ ++ +QED HEFL+ +D
Sbjct: 159 KVDRGFCMACALRQVAAKSF-SSRSPFAPSQITGRLQTIAKHMRKGRQEDTHEFLRYAID 217
Query: 207 RLESCCLDSKTK--DESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEI 264
L+ CL D+ L+ V ++FGG L S++ C +CG SDT++ ++DLSL+I
Sbjct: 218 ALQKSCLAGYPPKIDQKLAET--TWVHKIFGGRLRSRVTCRDCGYNSDTFDRILDLSLDI 275
Query: 265 EDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTD 324
++ AL F ++ ++ + K+ CEKCK+ V+ EK+ + P V HLKRF
Sbjct: 276 LKSDTIKDALRKFVAIDYLKGAD-KYKCEKCKKPVTAEKRFTIHDAPLVLTVHLKRFSPL 334
Query: 325 GSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSS 384
G KI V + L L+P+ S G Y LY ++ H G P GHY+++++S
Sbjct: 335 GR---KIGHPVTYDDHLSLQPFMSEGSFGPT---YSLYGVICHAGGGPHSGHYYAFVKSR 388
Query: 385 PDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEWVSSLLEAESIGM 433
W +ND V+ + + + AY+LFY + + + ++++ G+
Sbjct: 389 DGKWWEMNDEMVSPINGPPLSKKSAYVLFYMRAKGQGLEGAVKSQINGV 437
>gi|356563968|ref|XP_003550229.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Glycine
max]
Length = 735
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 122/350 (34%), Positives = 187/350 (53%), Gaps = 27/350 (7%)
Query: 85 GSSLLSRPVEKHWPIQI------------KPTGVGAGLENLGNTCFINAILQCFTHTLPL 132
G +SRP+++ + KP GL N GN+CF N +LQC + T PL
Sbjct: 149 GDGAISRPIKQAKDVLFPYDEFVKFFNWDKPGFPPCGLLNCGNSCFANVVLQCLSFTKPL 208
Query: 133 VQALRSFDHPRPCDGATEGFCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRY 192
V L H R C + +C +C +H+E + SS + SP ++ L I
Sbjct: 209 VAYLLEKGHRREC--SCNDWCFLCEFENHVERTRLSS-QAFSPMNILSRLPNIGGTLGYG 265
Query: 193 QQEDAHEFLQCLLDRLESCCLDSKTKDESL--SSQGDNIVQRVFGGCLISKLQCCNCGSC 250
+QEDAHEF++ +D ++S CLD ++++ + Q ++Q +FGG L S++ C C
Sbjct: 266 KQEDAHEFMRFSIDTMQSVCLDEFGGEKAVPPNLQETTLIQHIFGGRLQSEVICTKCDKI 325
Query: 251 SDTYEPLIDLSLEIE-DVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDK 309
S+ YE ++DL++EI D SL L+ FT E++ D E + CE CK+ V K+L +
Sbjct: 326 SNQYENMMDLTVEIHGDAASLEECLDQFTAKERL-DGENMYKCEGCKDYVKAWKRLTVKC 384
Query: 310 VPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPYTS-GGQNSDVELKYHLYAIVEH- 367
P++ LKRF++ K++K + FP L+L PY S G SD+ Y LY +V H
Sbjct: 385 APNILTIALKRFQS--GRFGKLNKRIAFPETLNLSPYMSEAGDGSDI---YKLYGVVVHI 439
Query: 368 -MGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAK 416
M ++ GHY YI+ W+R++D +V VE E VLSQ AY+L Y++
Sbjct: 440 DMLNASFFGHYICYIKDFQGNWYRIDDWKVMTVEVEEVLSQGAYMLLYSR 489
>gi|345781818|ref|XP_851591.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Canis lupus familiaris]
Length = 535
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 113/313 (36%), Positives = 173/313 (55%), Gaps = 15/313 (4%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL+N+GNTC++NA LQC T+T PL + S H C T C++C L+ H+
Sbjct: 78 VGAGLQNMGNTCYVNATLQCLTYTEPLASYMLSQQHGTTCRRQTS--CMLCTLQAHLTRV 135
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
L G+V + L + + F R++QEDAHE+L +LD ++ CL + Q
Sbjct: 136 LCHPGRV------LRPLPLLLAAFHRHKQEDAHEYLMFILDAMQQACLPEDKLSDPECPQ 189
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
++Q++FGG S++QC +C S T EP +D+SL+I S+ ALE K E +E
Sbjct: 190 DSTLIQQLFGGYWRSQIQCLHCQGISSTLEPYLDISLDIGAAHSISQALEQLMKPELLEG 249
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK-TDGSYVVKIDKHVEFPLELDLK 344
E + C KC E+V K L L P V L+RF G+ K+ K V++P LD++
Sbjct: 250 -ENAYHCSKCLEKVPASKVLTLHTSPKVLILVLRRFSDLTGN---KMTKEVQYPERLDMQ 305
Query: 345 PYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFV 404
Y S + L Y LYA++ H G S GHYF ++++ W++++D++V+ +
Sbjct: 306 HYLS--EQRAGPLVYVLYAVLVHAGRSCHSGHYFCFVKAGNGQWYKMDDAKVSACDVTCA 363
Query: 405 LSQDAYILFYAKQ 417
L Q AY+LFY ++
Sbjct: 364 LRQPAYVLFYMQK 376
>gi|348560035|ref|XP_003465820.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42-like [Cavia
porcellus]
Length = 435
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 116/312 (37%), Positives = 168/312 (53%), Gaps = 47/312 (15%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL+NLGNTCF+NA LQC T+T PL + S +H + C
Sbjct: 95 VGAGLQNLGNTCFVNAALQCLTYTPPLANYMLSREHTKTC-------------------- 134
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
I+S F+ QEDAHEFLQ LD ++ CL + + +Q
Sbjct: 135 -------------------IASHFRFGNQEDAHEFLQYTLDAMQEACLQGSYELDR-HTQ 174
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
++ ++FGG L S+++C NC SDT++ +D++LEI+DV S+ AL F K E++E
Sbjct: 175 ATTLIYQIFGGYLRSRVKCLNCRGVSDTFDLYLDVTLEIQDVRSVNEALAQFVKPEQLEG 234
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKT-DGSYVVKIDKHVEFPLELDLK 344
E + C KC V K L + + +V LKRF GS + KI V++P L+++
Sbjct: 235 -ENCYKCSKCNSMVPASKSLSIHRPSNVLTLSLKRFSNCTGSKIAKI---VKYPEHLNIR 290
Query: 345 PYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFV 404
Y S Q S ++Y LYA++ H GS GHYFSY+++S W+++ND V+ + V
Sbjct: 291 AYMS--QPSGEAMQYSLYAVLVHTGSKCCVGHYFSYVKASNGLWYQMNDFMVSPSDISSV 348
Query: 405 LSQDAYILFYAK 416
LSQ AYILFY +
Sbjct: 349 LSQQAYILFYIR 360
>gi|187954679|gb|AAI40989.1| Deubiquitinating enzyme 1 [Mus musculus]
Length = 526
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 113/318 (35%), Positives = 180/318 (56%), Gaps = 16/318 (5%)
Query: 103 PTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHI 162
P G G GL+N GN+C++NA LQC THT PL + S +H + C + EG C +CA+ H+
Sbjct: 46 PQGPGCGLQNTGNSCYLNAALQCLTHTPPLADYMLSQEHSQTC-CSPEG-CKMCAMEAHV 103
Query: 163 ELSL--ASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDE 220
SL + SG V+ P + ++S F ++QQEDAHEFL L+ + CL + +
Sbjct: 104 TQSLLHSHSGDVMKPSHI------LTSAFHKHQQEDAHEFLMFTLETMHESCLQVHRQSK 157
Query: 221 SLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKL 280
+S+ + + +FGG S+++C C SDTY+ +D+ L+I S+ AL K
Sbjct: 158 P-TSEDSSPIHDIFGGWWRSQIKCLLCQGTSDTYDCFLDIPLDISSAQSVKQALWDTEKS 216
Query: 281 EKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE 340
E++ + + C KC+E++ K L + P V L RF K+D+ V +P
Sbjct: 217 EELCG-DNAYYCGKCREKMPASKTLHVHIAPKVLMVVLNRFSAFTGN--KLDRKVSYPEF 273
Query: 341 LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVE 400
LDLKPY S + + L Y LYA++ H G++ GHYF +++ W++++D++VTR +
Sbjct: 274 LDLKPYLS--EPTGGPLPYALYAVLVHDGATSHSGHYFCCVKAGHGKWYKMDDTKVTRCD 331
Query: 401 EEFVLSQDAYILFYAKQG 418
VL+++AY+LFY +Q
Sbjct: 332 VTSVLNENAYVLFYVQQA 349
>gi|224089481|ref|XP_002308728.1| predicted protein [Populus trichocarpa]
gi|222854704|gb|EEE92251.1| predicted protein [Populus trichocarpa]
Length = 489
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 119/321 (37%), Positives = 178/321 (55%), Gaps = 15/321 (4%)
Query: 102 KPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDH 161
KP GL N GN+CF N +LQC T+T PLV L H C +C +C + H
Sbjct: 175 KPEFSPCGLLNCGNSCFANVVLQCLTYTRPLVAYLLKKGHQTECK--HNDWCFLCEFQSH 232
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES 221
+E + + S SP ++ L I +QEDAHEF++ +D ++S CLD +++
Sbjct: 233 VERA-SQSTLPFSPINIISRLPNIGGNLGYGRQEDAHEFMRLAIDTMQSVCLDEFGGEKA 291
Query: 222 L--SSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE-DVGSLGSALESFT 278
+ +SQ I+Q +FGG L S++ C C S+ +E ++DL++EI D SL L+ FT
Sbjct: 292 VEPASQETTIIQHIFGGRLQSQVICTKCNKISNQFENMMDLTVEIHGDAASLEECLDQFT 351
Query: 279 KLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFP 338
E + E + C++C + V K+L + + P+V LKRF++ K++K V FP
Sbjct: 352 DKEWLHG-ENMYKCDRCNDYVKAWKRLTIQRAPNVLTIALKRFQS--GRFGKLNKRVTFP 408
Query: 339 LELDLKPYTS-GGQNSDVELKYHLYAIVEH--MGSSPTCGHYFSYIRSSPDTWHRLNDSR 395
LDL PY S GG +DV Y LYA+V H M ++ GHY Y + WHR++D +
Sbjct: 409 EMLDLSPYMSEGGDGTDV---YKLYAVVVHVDMLNASFFGHYICYTKDFHGNWHRIDDCK 465
Query: 396 VTRVEEEFVLSQDAYILFYAK 416
V+ VE + VLSQ AY+L Y++
Sbjct: 466 VSSVELDEVLSQGAYMLVYSR 486
>gi|345781712|ref|XP_854129.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Canis lupus familiaris]
Length = 535
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 114/313 (36%), Positives = 173/313 (55%), Gaps = 15/313 (4%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL+N+GNTC++NA LQC T+T PL + S H C T C++C L+ H+
Sbjct: 78 VGAGLQNMGNTCYVNATLQCLTYTEPLASYMLSQQHGTTCRRQTS--CMLCTLQAHLTRV 135
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
L G+VL L + + F R++QEDAHE+L +LD ++ CL + Q
Sbjct: 136 LCHPGRVLR------PLPLLLAAFHRHKQEDAHEYLMFILDAMQQACLPEDKLSDPERPQ 189
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
++Q++F G S++QC +C S T EP +D+SL+I D S+ ALE K E +E
Sbjct: 190 DSTLIQQLFEGYWRSQIQCLHCQGISSTLEPYLDISLDIGDAHSVSQALEQLVKPELLEG 249
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK-TDGSYVVKIDKHVEFPLELDLK 344
E + C KC E+V K L L P V L+RF G+ K+ K V++P LD++
Sbjct: 250 -ENAYHCRKCLEKVPASKVLTLHTSPKVLILVLRRFSDLTGN---KMTKEVQYPERLDMQ 305
Query: 345 PYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFV 404
Y S + L Y LYA++ H G S GHYF ++++ W++++D++V+ +
Sbjct: 306 HYLS--EQRAGPLVYVLYAVLVHAGRSCHSGHYFCFVKAGNGQWYKMDDAKVSACDVTCA 363
Query: 405 LSQDAYILFYAKQ 417
L Q AY+LFY ++
Sbjct: 364 LRQPAYVLFYMQK 376
>gi|301102127|ref|XP_002900151.1| ubiquitin-specific protease, putative [Phytophthora infestans
T30-4]
gi|262102303|gb|EEY60355.1| ubiquitin-specific protease, putative [Phytophthora infestans
T30-4]
Length = 739
Score = 198 bits (504), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 122/346 (35%), Positives = 181/346 (52%), Gaps = 43/346 (12%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQAL------RSFDH-PRPCDG-------ATEG 151
+G G NLGNTC++N++LQC T+T Q L SF+ P G G
Sbjct: 120 IGPGFANLGNTCYLNSVLQCLTYTPCFAQFLLDKEVFASFNSGALPSTGNKFNKKFGKNG 179
Query: 152 FCV---------ICALRDHIELSLASSG----KVLSPRKLVDNLNYISSFFQRYQQEDAH 198
F C++R L + G +VL P++LV N+ +IS F+ +QED+H
Sbjct: 180 FSGNSGNAGGNGFCSVRAMSRLLQSVHGNNAVRVLQPKELVMNVRHISKSFRIGRQEDSH 239
Query: 199 EFLQCLLDRLESCCL-DSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPL 257
EF + LLD ++ CL + K ES S+ V R+FGG L + L+C CG S+ ++
Sbjct: 240 EFFRLLLDSMQRSCLRKAHIKSESHSAASTTFVYRMFGGKLKNHLKCAKCGFVSERFDDF 299
Query: 258 IDLSLEIED-VGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAF 316
+DLSLEI + V S+ AL FT +EK+ D + C C + EK L + + P+V
Sbjct: 300 LDLSLEISNGVHSVKGALRHFTAIEKL-DERNAWKCSSCGKPSRAEKGLSIAECPNVLMI 358
Query: 317 HLKRFKTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVE------LKYHLYAIVEHMGS 370
LKRF KI +H+EFP LD+ + G + + E KY L+A++ H G
Sbjct: 359 QLKRFDL---MFGKIKRHIEFPRSLDI----ASGMSKNCEDRRRGRTKYELHAVLVHAGF 411
Query: 371 SPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAK 416
S CGHY+++++ S W+ +ND V V + VL Q AY+LFY++
Sbjct: 412 STDCGHYYAFVKGSSGQWYEMNDDSVRWVSLDTVLQQKAYMLFYSR 457
>gi|297798806|ref|XP_002867287.1| ubiquitin carboxyl-terminal hydrolase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297313123|gb|EFH43546.1| ubiquitin carboxyl-terminal hydrolase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 618
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 121/333 (36%), Positives = 179/333 (53%), Gaps = 15/333 (4%)
Query: 103 PTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHI 162
P GL N GN+CF N ILQC + T PLV L H R C +C C + H+
Sbjct: 163 PELAPCGLMNCGNSCFANVILQCLSWTRPLVAYLLEKGHKREC--MHNDWCFFCEFQTHV 220
Query: 163 ELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESL 222
E + + S SP ++ L I +QEDAHEF++ +D ++S CL+ ++ +
Sbjct: 221 ERA-SQSRFPFSPMNIISRLTNIGGTLGYGRQEDAHEFMRYAIDMMQSVCLEEFGGEKIV 279
Query: 223 --SSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE-DVGSLGSALESFTK 279
SQ ++Q +FGG L S++QC C SD YE ++DL +E+ D SL L+ FT
Sbjct: 280 PPRSQETTLIQYIFGGLLQSQVQCTVCNHVSDQYENMMDLIVEMHGDAVSLEECLDQFTA 339
Query: 280 LEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPL 339
E + + + C++C + V K+L + + P++ LKR++ G K++K + FP
Sbjct: 340 EEWLHG-DNMYKCDRCSDYVKACKRLTIWRAPNILTIALKRYQ--GGRYGKLNKRISFPA 396
Query: 340 ELDLKPYTS-GGQNSDVELKYHLYAIVEH--MGSSPTCGHYFSYIRSSPDTWHRLNDSRV 396
LDL PY S GG SDV Y LYA++ H M ++ GHY YI+ W+R++DS +
Sbjct: 397 TLDLNPYMSEGGDGSDV---YKLYAVIVHLDMLNASFFGHYICYIKDFCGNWYRIDDSEI 453
Query: 397 TRVEEEFVLSQDAYILFYAKQGTEWVSSLLEAE 429
VE E VLSQ AY+L Y++ SS L +E
Sbjct: 454 ESVELEDVLSQRAYMLLYSRIQARSSSSCLRSE 486
>gi|313234290|emb|CBY10357.1| unnamed protein product [Oikopleura dioica]
Length = 742
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 129/336 (38%), Positives = 177/336 (52%), Gaps = 22/336 (6%)
Query: 92 PVEK---HW-PIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQAL-RSFDHPRPCD 146
PVEK W Q+K G GL NLGNTC++N+ LQC HT PLV L +S +HP
Sbjct: 122 PVEKIGLKWNQQQMKLLG---GLCNLGNTCYLNSSLQCLMHTAPLVNILSQSQNHP---- 174
Query: 147 GATEGFCVICALRDHIE-LSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLL 205
AT GFC + AL I L P+++V NL I+S F +QE AHEF + +
Sbjct: 175 -ATNGFCPLKALSRLIRTLQNIGPRSASRPQEIVQNLRKIASHFSYGRQECAHEFTRLFM 233
Query: 206 DRLESCCLDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE 265
D L C K + + I RVFGG L S++ C NC SDT+E +D++LE++
Sbjct: 234 DALLRSCTRMNGKVDKYE-ETTTIPHRVFGGWLRSRVSCSNCKHNSDTFESFLDINLEMK 292
Query: 266 DVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDG 325
SL + FT E I D + C+KCK+ K+ + + P+V A LKRF G
Sbjct: 293 GCDSLQDCMRHFTMTE-ILDNGNMYKCDKCKKATRAAKRFTIHRPPNVLAISLKRFNMMG 351
Query: 326 SYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSP 385
+ K + + F +LD+ Y S S ++ Y LYAI+ H G + GHY+SY R+S
Sbjct: 352 N---KNGREIRFSSKLDISKYCS---YSKMDNNYELYAILVHAGFTVNSGHYYSYCRTSK 405
Query: 386 DTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
TW R +DS VT E VL Q Y+L+Y + T +
Sbjct: 406 GTWSRFDDSCVTPTSLENVLRQQPYMLYYVRTDTPF 441
>gi|73979654|ref|XP_854031.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Canis
lupus familiaris]
Length = 535
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 114/313 (36%), Positives = 173/313 (55%), Gaps = 15/313 (4%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL+N+GNTC++NA LQC T+T PL + S H C T C++C L+ H+
Sbjct: 78 VGAGLQNMGNTCYVNATLQCLTYTEPLASYMLSQQHGTTCRRQTS--CMLCTLQAHLTRV 135
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
L G+VL L + + F R++QEDAHE+L +LD ++ CL + Q
Sbjct: 136 LCHPGRVLR------PLPLLLAAFHRHKQEDAHEYLMFILDAMQQACLPEDKLSDPECPQ 189
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
++Q++FGG S++QC +C S T EP +D+SL+I D S+ ALE K E +E
Sbjct: 190 DSTLIQQLFGGYWRSQIQCLHCQGISSTLEPYLDISLDIGDAHSVSQALEQLMKPELLEG 249
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK-TDGSYVVKIDKHVEFPLELDLK 344
E + C KC E+V K L L P V L+RF G+ K+ K V++P LD++
Sbjct: 250 -ENAYHCSKCLEKVPASKVLTLHTSPKVLILVLRRFSDLTGN---KMTKEVQYPERLDMQ 305
Query: 345 PYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFV 404
S + L Y LYA++ H G S GHYF ++++ W++++D++V+ +
Sbjct: 306 HCLS--EQRAGPLVYVLYAVLVHTGRSCHSGHYFCFVKAGNGQWYKMDDAKVSACDVTCA 363
Query: 405 LSQDAYILFYAKQ 417
L Q AY+LFY ++
Sbjct: 364 LRQPAYVLFYMQK 376
>gi|18400597|ref|NP_565576.1| ubiquitin carboxyl-terminal hydrolase 19 [Arabidopsis thaliana]
gi|75265927|sp|Q9SJA1.2|UBP19_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 19; AltName:
Full=Deubiquitinating enzyme 19; Short=AtUBP19; AltName:
Full=Ubiquitin thioesterase 19; AltName:
Full=Ubiquitin-specific-processing protease 19
gi|13430806|gb|AAK26025.1|AF360315_1 putative ubiquitin carboxyl terminal hydrolase [Arabidopsis
thaliana]
gi|15810655|gb|AAL07252.1| putative ubiquitin carboxyl terminal hydrolase [Arabidopsis
thaliana]
gi|20197976|gb|AAD23896.2| putative ubiquitin carboxyl terminal hydrolase [Arabidopsis
thaliana]
gi|330252513|gb|AEC07607.1| ubiquitin carboxyl-terminal hydrolase 19 [Arabidopsis thaliana]
Length = 672
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 115/321 (35%), Positives = 177/321 (55%), Gaps = 15/321 (4%)
Query: 102 KPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDH 161
+P GL N GN+CF N +LQC + T PLV L H R C +C +C +H
Sbjct: 168 RPIMAPCGLTNCGNSCFANVVLQCLSWTRPLVAYLLERGHKREC--RRNDWCFLCEFENH 225
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES 221
++ + S SP ++ L I +QEDAHE ++ +D ++S CLD ++
Sbjct: 226 LDRANYSRFP-FSPMNIISRLPNIGGNLGYGRQEDAHELMRFAIDMMQSVCLDEFGGEKV 284
Query: 222 L--SSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE-DVGSLGSALESFT 278
+ +Q ++Q +FGG L S++QC C + SD YE ++DL++EI D SL L+ FT
Sbjct: 285 VPPRAQETTLIQYIFGGLLQSQVQCTACSNVSDQYENMMDLTVEIHGDAVSLEECLDQFT 344
Query: 279 KLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFP 338
E ++ + + C++C + V K+L + P++ LKRF+ G K++K + FP
Sbjct: 345 AKEWLQG-DNLYKCDRCDDYVKACKRLSIRCAPNILTIALKRFQ--GGRFGKLNKRISFP 401
Query: 339 LELDLKPYTSGG-QNSDVELKYHLYAIVEH--MGSSPTCGHYFSYIRSSPDTWHRLNDSR 395
DL PY SGG + SDV Y LYA++ H M ++ GHY Y++ W+R++DS
Sbjct: 402 ETFDLGPYMSGGGEGSDV---YKLYAVIVHLDMLNASFFGHYICYVKDFRGNWYRIDDSE 458
Query: 396 VTRVEEEFVLSQDAYILFYAK 416
V +VE E VLSQ AY+L Y++
Sbjct: 459 VEKVELEDVLSQRAYMLLYSR 479
>gi|356556906|ref|XP_003546761.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15-like [Glycine
max]
Length = 989
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 118/313 (37%), Positives = 176/313 (56%), Gaps = 13/313 (4%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL N GN+C+ NA+LQC T T PLV L H + C + +C++C L HI + L
Sbjct: 470 GLLNCGNSCYANAVLQCLTSTKPLVIYLLYRSHSKAC--CAKDWCLMCELEQHIMI-LRE 526
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSS--QG 226
+G LSP +++ ++ I+ QEDAHEFL+ L+ ++S CL+ ++ + Q
Sbjct: 527 NGAPLSPSRILWHMRSINCHMGEGSQEDAHEFLRLLIASMQSICLEGLGGEKKVDPRIQE 586
Query: 227 DNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIED-VGSLGSALESFTKLEKIED 285
+Q FGG L SK++C NC S+ YE ++DL+LEI V SL AL FT E + D
Sbjct: 587 TTFIQHTFGGRLQSKVKCLNCNHESERYENIMDLTLEILGWVESLEDALTQFTSPEDL-D 645
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E + C +C V KQL + + P++ LKRF+ +G Y KI+K + FP LD+ P
Sbjct: 646 GENMYRCGRCTSYVRARKQLSIHEAPNILTIVLKRFQ-EGRY-GKINKCITFPEMLDMIP 703
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGS--SPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
+ +G D+ Y LYA+V H+ + + GHY SY++ W R++D+ V V
Sbjct: 704 FMTG--TGDIPPLYMLYAVVVHLDTLNASFSGHYVSYVKDLQGNWFRIDDAEVQPVLINQ 761
Query: 404 VLSQDAYILFYAK 416
V+S+ AYILFY +
Sbjct: 762 VMSEGAYILFYMR 774
>gi|357465295|ref|XP_003602929.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
gi|355491977|gb|AES73180.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
Length = 1116
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 116/312 (37%), Positives = 179/312 (57%), Gaps = 12/312 (3%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL N+GN+C+ NA+LQC T PL L H + C T +C IC + +
Sbjct: 585 GLINIGNSCYANAVLQCLAFTPPLSAYLVQGLHSKSCSNKT--WCFICEF-ERLIFKSKD 641
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDN 228
+ LSP ++ L I S ++EDAHEFL+ +D ++S CL + S SS+ D
Sbjct: 642 TKSPLSPTGILSQLQSIGSQLGNGKEEDAHEFLRHAIDTMQSVCLMEAGINASGSSEEDT 701
Query: 229 -IVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE-DVGSLGSALESFTKLEKIEDP 286
++ + FGG L SK++C CG S+ E ++DL++EIE ++ +L AL FT E + D
Sbjct: 702 TLMGQTFGGYLRSKIKCMKCGGKSERQERMMDLTVEIEGEISTLAEALRRFTSTETL-DG 760
Query: 287 ETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPY 346
E K+ C +CK +K+L + + P++ LKRF++ G + K++K V+FP LDL P+
Sbjct: 761 ENKYHCVRCKSYQKAKKKLTVSEAPNILTVALKRFQS-GKFG-KLNKPVQFPEILDLAPF 818
Query: 347 TSGGQNSDVELKYHLYAIVEHMG--SSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFV 404
SG SD Y LY +V H+ ++ GHY Y+++ + W +++DS VT VE E V
Sbjct: 819 VSG--TSDKTPIYRLYGVVVHLDVMNASFSGHYVCYLKNIQNKWFKVDDSVVTAVELERV 876
Query: 405 LSQDAYILFYAK 416
L++ AY+LFYA+
Sbjct: 877 LTKGAYMLFYAR 888
>gi|412989987|emb|CCO20629.1| predicted protein [Bathycoccus prasinos]
Length = 706
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 121/377 (32%), Positives = 188/377 (49%), Gaps = 59/377 (15%)
Query: 93 VEKHWPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGF 152
++ W K +G+GL+NLGNTCF+NA+LQC T+T L + +H + + + GF
Sbjct: 72 IQMEWQTVSK---IGSGLQNLGNTCFLNAVLQCLTYTPALANFFLNNEHQKHKN-LSSGF 127
Query: 153 CVICALRDHIELSLASSGK---VLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRL- 208
+ + + ++ +L S + P V N+ +S F++ +QED+HEF +CLLD +
Sbjct: 128 NSLFEMGNLVKNTLIHSKNKHHAVPPTAFVKNIRALSKTFKKGRQEDSHEFARCLLDSMH 187
Query: 209 ESCCLDSKTKDESLSSQGDN------------------IVQRVFGGCLISKLQCCNCGSC 250
+ CC+ + D S S+ + + RVFGG L S + C +CG
Sbjct: 188 KRCCMLGRVDDGSSSNTRNGKKLTANAIDPESKEAETTFIWRVFGGQLRSCVTCQSCGRE 247
Query: 251 SDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKV 310
S +P +D+SLE V SL AL+ FT++E + D + K+ CE CK+ +KQ +DK
Sbjct: 248 SAKLDPCMDMSLECAKVKSLEQALKLFTRVE-VLDGDNKYRCEGCKKLSRAKKQFSVDKA 306
Query: 311 PSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPY------TSGGQNSDVELK------ 358
P+V LKRF+ K+ + +E+PL LDL Y +GG+ K
Sbjct: 307 PNVLQIQLKRFEFVPFGRGKLSQFIEYPLVLDLTSYLTSILKINGGRRGKKRSKSANNAV 366
Query: 359 --------------------YHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTR 398
Y L ++ H GSS GHY+SY+++ W ++D VT
Sbjct: 367 LDDIMGGSSTEKAFSSSSSVYDLIGVLVHAGSSMNSGHYYSYVKAQNGFWFEMDDESVTN 426
Query: 399 VEEEFVLSQDAYILFYA 415
V E+ VL Q AY+LFY+
Sbjct: 427 VSEKTVLRQKAYLLFYS 443
>gi|449486818|ref|XP_004157412.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Cucumis
sativus]
Length = 711
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 118/330 (35%), Positives = 184/330 (55%), Gaps = 16/330 (4%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL N GN+CF N +LQC + T PL L H C + +C C + H+E + +
Sbjct: 189 GLLNCGNSCFANVVLQCLSFTRPLFAFLLEKGHRNEC--VRDDWCFFCEFQTHVERA-SQ 245
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLS--SQG 226
+ + SP ++ L I +QEDAHEF++ +DR++ CLD ++++ S+
Sbjct: 246 NAQPFSPNNIILRLPNIGGNLGYGRQEDAHEFMRFAIDRMQLACLDEFGGEKAVCAHSRE 305
Query: 227 DNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE-DVGSLGSALESFTKLEKIED 285
I+Q +FGG L S++ C NC + S+ +E ++DL++EI D SL L+ FTK+E +
Sbjct: 306 TTIIQHIFGGQLQSQVICTNCNNVSNQHENMMDLTVEIHGDAASLEECLDQFTKIEWLH- 364
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
+ K+ C+ C + V K+L + + P++ LKRF++ K++K V FP LDL P
Sbjct: 365 GDNKYKCDGCNDYVKASKRLTIKQAPNILTIALKRFQS--GRFGKLNKKVAFPETLDLSP 422
Query: 346 YTS-GGQNSDVELKYHLYAIVEH--MGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEE 402
Y S G DV Y LYA+V H M ++ GHY YI+ W+R++D +V +V+ E
Sbjct: 423 YMSEAGDRKDV---YRLYAVVVHVDMLNASFFGHYICYIKDFSGNWYRIDDCKVFKVDLE 479
Query: 403 FVLSQDAYILFYAKQGTEWVSSLLEAESIG 432
VLSQ AY++ Y++ SSL ES+G
Sbjct: 480 EVLSQGAYMILYSRVRPR-SSSLQTIESMG 508
>gi|356502067|ref|XP_003519843.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Glycine
max]
Length = 938
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 118/315 (37%), Positives = 179/315 (56%), Gaps = 16/315 (5%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL N GN+C+ NA+LQC +T PL L H + C +G+C C I+ A
Sbjct: 415 GLTNCGNSCYANAVLQCLAYTRPLTSYLFQGFHSKRCQ--KKGWCFTCEFEYLIQK--AK 470
Query: 169 SG-KVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGD 227
G LSP ++ ++ I S R ++EDAHEFL+C++D ++S CL L+ +
Sbjct: 471 EGISPLSPIGILSKIHKIGSHLGRGREEDAHEFLRCVVDTMQSICLKEVGVSSPLAEE-T 529
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE-DVGSLGSALESFTKLEKIEDP 286
+V FGG L SK++C C S+ YE ++DL++EI+ D+G+L AL FT E I D
Sbjct: 530 TLVSYTFGGYLRSKIKCLRCLGKSERYERMMDLTVEIDGDIGTLEEALGQFTAPE-ILDK 588
Query: 287 ETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPY 346
+ K+ C +CK V K+L + + P++ LKRF++ G++ K++K V+FP L++ PY
Sbjct: 589 DNKYNCSRCKTYVKARKKLTVLEAPNILTIVLKRFQS-GNFE-KLNKSVQFPEVLNMAPY 646
Query: 347 TSGGQNSDVELKYHLYAIVEHMG----SSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEE 402
SG + D Y LYA+V H+ ++ GHY Y+++ W R +DSRV VE
Sbjct: 647 MSGTK--DKSPLYSLYAVVVHLDLDIMNAAFSGHYVCYVKNIQGEWFRTDDSRVEPVELS 704
Query: 403 FVLSQDAYILFYAKQ 417
VLS+ AY+L YA+
Sbjct: 705 RVLSERAYMLLYARH 719
>gi|449447371|ref|XP_004141442.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Cucumis
sativus]
Length = 711
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 118/330 (35%), Positives = 184/330 (55%), Gaps = 16/330 (4%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL N GN+CF N +LQC + T PL L H C + +C C + H+E + +
Sbjct: 189 GLLNCGNSCFANVVLQCLSFTRPLFAFLLEKGHRNEC--VRDDWCFFCEFQTHVERA-SQ 245
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLS--SQG 226
+ + SP ++ L I +QEDAHEF++ +DR++ CLD ++++ S+
Sbjct: 246 NAQPFSPNNIILRLPNIGGNLGYGRQEDAHEFMRFAIDRMQLACLDEFGGEKAVCAHSRE 305
Query: 227 DNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE-DVGSLGSALESFTKLEKIED 285
I+Q +FGG L S++ C NC + S+ +E ++DL++EI D SL L+ FTK+E +
Sbjct: 306 TTIIQHIFGGQLQSQVICTNCNNVSNQHENMMDLTVEIHGDAASLEECLDQFTKIEWLH- 364
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
+ K+ C+ C + V K+L + + P++ LKRF++ K++K V FP LDL P
Sbjct: 365 GDNKYKCDGCNDYVKASKRLTIKQAPNILTIALKRFQS--GRFGKLNKKVAFPETLDLSP 422
Query: 346 YTS-GGQNSDVELKYHLYAIVEH--MGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEE 402
Y S G DV Y LYA+V H M ++ GHY YI+ W+R++D +V +V+ E
Sbjct: 423 YMSEAGDRKDV---YRLYAVVVHVDMLNASFFGHYICYIKDFSGNWYRIDDCKVFKVDLE 479
Query: 403 FVLSQDAYILFYAKQGTEWVSSLLEAESIG 432
VLSQ AY++ Y++ SSL ES+G
Sbjct: 480 EVLSQGAYMILYSRVRPR-SSSLQTIESMG 508
>gi|443897312|dbj|GAC74653.1| ubiquitin carboxyl-terminal hydrolase [Pseudozyma antarctica T-34]
Length = 744
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 124/379 (32%), Positives = 190/379 (50%), Gaps = 31/379 (8%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFD----HPRPCDGATEGFCVICALRDH 161
AGL N GNTC++N+++Q HT PL AL + + H F + A+
Sbjct: 193 AAAGLSNYGNTCYMNSVMQALVHTPPLAFALLTQELDVLHGEWGGKPNAAFDAVTAMHSF 252
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES 221
+ SL + +P++ NL + ++ +QEDAHE+L+ LL+ L+ CL K S
Sbjct: 253 AKRSLQGTRPTNAPQEFNRNLKAFAKPLRQGRQEDAHEYLRFLLEALQQSCLARAPK--S 310
Query: 222 LS----SQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEI-EDVGSLGSALES 276
L ++ V + FGG L S++ C +CG SDT++P +DLSL++ + + SL AL +
Sbjct: 311 LKPDDPARRTTFVHKTFGGKLRSRVMCHSCGHNSDTFDPFMDLSLDVRKGINSLTDALRA 370
Query: 277 FTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVE 336
F + + E K+ C+KCK +V KQ +D P HLKRF G K+ + +
Sbjct: 371 FVAKDHLTGAE-KYKCDKCKRKVDATKQFTIDAAPPALTVHLKRFTVFGG---KVSRQIA 426
Query: 337 FPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRV 396
F L++ PY S ++ +Y LYA V H GS P GHY + +RS W R++DS V
Sbjct: 427 FDDMLNIAPYLS---VNNGPARYRLYATVHHYGSGPNSGHYVASVRSPSGKWMRMDDSHV 483
Query: 397 TRVEEEFVLS-QDAYILFYAKQGTEWVSSLLEAESIGMNADISNSSPKSVLDNVENDYTS 455
+ + Q AYILFY ++ E + + L A + PKS ++E
Sbjct: 484 AEMGRSGPTNDQSAYILFYLREKDEALETALAAV----------APPKSAPTSLEAKKRK 533
Query: 456 RSGVANAESCKANEPSASA 474
++ V ES +E ASA
Sbjct: 534 KAAV--QESVSESESDASA 550
>gi|291411123|ref|XP_002721842.1| PREDICTED: deubiquitinating enzyme 3-like [Oryctolagus cuniculus]
Length = 530
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 108/316 (34%), Positives = 176/316 (55%), Gaps = 14/316 (4%)
Query: 102 KPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDH 161
+P G+GAGL+N GNTC++NA LQC T+T PL + S H + C + C++CA+ H
Sbjct: 76 RPYGIGAGLQNTGNTCYLNAALQCLTYTPPLANYMLSQVHSQSCRRSDR--CILCAVETH 133
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES 221
+L S G V+ P ++ +++ F +QEDAHEFL LD L++ L T D
Sbjct: 134 FLWALHSPGDVIQPCQV------LAAGFHTNRQEDAHEFLMFALDVLKAAGLPGLT-DGV 186
Query: 222 LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLE 281
+ + Q++ GG S++QC C S+T +P ++++L+I+ S+ AL+ + E
Sbjct: 187 GPQEDQSPSQQIVGGHWRSQIQCLQCQGISETLDPYLEIALDIKTADSVEQALQHLVQPE 246
Query: 282 KIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLEL 341
++ E + C C+++ + K L L V F LKRF K+ V +P L
Sbjct: 247 ELAG-ENAYHCATCRQKTAASKTLTLQSAGKVLLFVLKRFSEFTGE--KLGGQVHYPECL 303
Query: 342 DLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEE 401
D++PY S Q + L Y LYA++ H+G GHYF Y+++ W++++D++VT +
Sbjct: 304 DMRPYMS--QQNGRPLDYVLYAVLVHVGLRCQSGHYFCYVKAGSGHWYKMDDAKVTACDT 361
Query: 402 EFVLSQDAYILFYAKQ 417
VL+Q AY+LFY ++
Sbjct: 362 TCVLNQSAYVLFYVRK 377
>gi|296083782|emb|CBI23999.3| unnamed protein product [Vitis vinifera]
Length = 892
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 119/321 (37%), Positives = 176/321 (54%), Gaps = 15/321 (4%)
Query: 102 KPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDH 161
KP GL N GN+CF N +LQC +T PLV L H R C +C +C + H
Sbjct: 114 KPGFPPCGLINCGNSCFANVVLQCLAYTRPLVAYLLEKGHRRQC--RRNDWCFLCEFQVH 171
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES 221
+E + + S + SP ++ L I +QEDAHEF++ +D ++S CLD ++S
Sbjct: 172 VERA-SHSPQPFSPINILSRLPSIGGNLGYGKQEDAHEFMRFAIDTMQSVCLDEFGGEKS 230
Query: 222 L--SSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE-DVGSLGSALESFT 278
+ SSQ ++Q +FGG L S++ C C S+ YE ++DL++EI D SL L+ FT
Sbjct: 231 VHPSSQETTLIQHIFGGHLQSQVICTKCSKISNQYENMMDLTVEIHGDAASLEECLDQFT 290
Query: 279 KLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFP 338
E + E + C+ C + V K+L + P++ LKRF++ K++K V FP
Sbjct: 291 VTEWLHG-ENMYKCDGCNDYVKASKRLTVRHAPNILTIALKRFQS--GRFGKLNKRVTFP 347
Query: 339 LELDLKPYTSGGQ-NSDVELKYHLYAIVEH--MGSSPTCGHYFSYIRSSPDTWHRLNDSR 395
LDL PY S +DV Y LYA+V H M ++ GHY Y + W+R++D +
Sbjct: 348 ETLDLSPYMSKAVVGTDV---YKLYAVVVHLDMLNASFFGHYVCYTKDFGGNWYRIDDCK 404
Query: 396 VTRVEEEFVLSQDAYILFYAK 416
VTRVE + VLSQ AY+L Y++
Sbjct: 405 VTRVELDDVLSQGAYMLLYSR 425
>gi|291411125|ref|XP_002721843.1| PREDICTED: deubiquitinating enzyme 3-like [Oryctolagus cuniculus]
Length = 500
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 108/316 (34%), Positives = 176/316 (55%), Gaps = 14/316 (4%)
Query: 102 KPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDH 161
+P G+GAGL+N GNTC++NA LQC T+T PL + S H + C + C++CA+ H
Sbjct: 46 RPYGIGAGLQNTGNTCYLNAALQCLTYTPPLANYMLSQVHSQSCRRSDR--CILCAVETH 103
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES 221
+L S G V+ P ++ +++ F +QEDAHEFL LD L++ L T D
Sbjct: 104 FLWALHSPGDVIQPCQV------LAAGFHTNRQEDAHEFLMFALDVLKAAGLPGLT-DGV 156
Query: 222 LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLE 281
+ + Q++ GG S++QC C S+T +P ++++L+I+ S+ AL+ + E
Sbjct: 157 GPQEDQSPSQQIVGGHWRSQIQCLQCQGISETLDPYLEIALDIKTADSVEQALQHLVQPE 216
Query: 282 KIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLEL 341
++ E + C C+++ + K L L V F LKRF K+ V +P L
Sbjct: 217 ELAG-ENAYHCATCRQKTAASKTLTLQSAGKVLLFVLKRFSEFTGE--KLGGQVHYPECL 273
Query: 342 DLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEE 401
D++PY S Q + L Y LYA++ H+G GHYF Y+++ W++++D++VT +
Sbjct: 274 DMRPYMS--QQNGRPLDYVLYAVLVHVGLRCQSGHYFCYVKAGSGHWYKMDDAKVTACDT 331
Query: 402 EFVLSQDAYILFYAKQ 417
VL+Q AY+LFY ++
Sbjct: 332 TCVLNQSAYVLFYVRK 347
>gi|303284199|ref|XP_003061390.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456720|gb|EEH54020.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 308
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 116/327 (35%), Positives = 175/327 (53%), Gaps = 30/327 (9%)
Query: 97 WPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVIC 156
WP K +GAGL NLGNTCF+NA++QC THT PL Q + +H +
Sbjct: 3 WPEARK---IGAGLANLGNTCFMNAVMQCLTHTPPLAQFCLAGEHRN----------ALY 49
Query: 157 ALRDHIELSLASSGK--VLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLD 214
+ +H+ +L G+ ++P V NL +S F++ +QEDAHEF +CLLD + C+D
Sbjct: 50 EMGEHVSRALGREGRRHTIAPATFVKNLRALSKTFRKGRQEDAHEFARCLLDAMHKRCVD 109
Query: 215 S---KTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLG 271
+ K K+ S S+ + V +VFGG L S++ C CG SDT++ +DLSL++ S+
Sbjct: 110 AARPKPKEGSARSE-TSFVWQVFGGRLRSRVACKTCGKMSDTFDSFMDLSLDVARSRSVQ 168
Query: 272 SALESFTKLEKIEDPETKFTCEKCK---EQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYV 328
SAL+S+T +E + D K+ CE KQ +D P V RF
Sbjct: 169 SALKSYTAVE-VLDGANKYKCEMGPGKPHMTRATKQFTIDAAPKVLTIQ-ARFTRR---- 222
Query: 329 VKIDKHVEFPLELDLKPYTS-GGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDT 387
K+++ VE+P LD+ S + +Y L+ ++ H G S GHY+ Y++ S
Sbjct: 223 -KLNQFVEYPTRLDVSEAMSDASPRARGRERYSLFGVLVHSGGSMHSGHYYCYVKGSTGH 281
Query: 388 WHRLNDSRVTRVEEEFVLSQDAYILFY 414
W+ ++D V+ V E+ LSQ AY+LFY
Sbjct: 282 WYEMDDEGVSPVSEKTALSQRAYLLFY 308
>gi|334184421|ref|NP_001189593.1| ubiquitin carboxyl-terminal hydrolase 19 [Arabidopsis thaliana]
gi|227206324|dbj|BAH57217.1| AT2G24640 [Arabidopsis thaliana]
gi|330252514|gb|AEC07608.1| ubiquitin carboxyl-terminal hydrolase 19 [Arabidopsis thaliana]
Length = 502
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 114/314 (36%), Positives = 175/314 (55%), Gaps = 15/314 (4%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL N GN+CF N +LQC + T PLV L H R C +C +C +H++ + S
Sbjct: 5 GLTNCGNSCFANVVLQCLSWTRPLVAYLLERGHKREC--RRNDWCFLCEFENHLDRANYS 62
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESL--SSQG 226
SP ++ L I +QEDAHE ++ +D ++S CLD ++ + +Q
Sbjct: 63 RFP-FSPMNIISRLPNIGGNLGYGRQEDAHELMRFAIDMMQSVCLDEFGGEKVVPPRAQE 121
Query: 227 DNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE-DVGSLGSALESFTKLEKIED 285
++Q +FGG L S++QC C + SD YE ++DL++EI D SL L+ FT E ++
Sbjct: 122 TTLIQYIFGGLLQSQVQCTACSNVSDQYENMMDLTVEIHGDAVSLEECLDQFTAKEWLQG 181
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
+ + C++C + V K+L + P++ LKRF+ G K++K + FP DL P
Sbjct: 182 -DNLYKCDRCDDYVKACKRLSIRCAPNILTIALKRFQ--GGRFGKLNKRISFPETFDLGP 238
Query: 346 YTSGG-QNSDVELKYHLYAIVEH--MGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEE 402
Y SGG + SDV Y LYA++ H M ++ GHY Y++ W+R++DS V +VE E
Sbjct: 239 YMSGGGEGSDV---YKLYAVIVHLDMLNASFFGHYICYVKDFRGNWYRIDDSEVEKVELE 295
Query: 403 FVLSQDAYILFYAK 416
VLSQ AY+L Y++
Sbjct: 296 DVLSQRAYMLLYSR 309
>gi|359476454|ref|XP_002271840.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Vitis
vinifera]
Length = 940
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 119/321 (37%), Positives = 176/321 (54%), Gaps = 15/321 (4%)
Query: 102 KPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDH 161
KP GL N GN+CF N +LQC +T PLV L H R C +C +C + H
Sbjct: 190 KPGFPPCGLINCGNSCFANVVLQCLAYTRPLVAYLLEKGHRRQC--RRNDWCFLCEFQVH 247
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES 221
+E + + S + SP ++ L I +QEDAHEF++ +D ++S CLD ++S
Sbjct: 248 VERA-SHSPQPFSPINILSRLPSIGGNLGYGKQEDAHEFMRFAIDTMQSVCLDEFGGEKS 306
Query: 222 L--SSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE-DVGSLGSALESFT 278
+ SSQ ++Q +FGG L S++ C C S+ YE ++DL++EI D SL L+ FT
Sbjct: 307 VHPSSQETTLIQHIFGGHLQSQVICTKCSKISNQYENMMDLTVEIHGDAASLEECLDQFT 366
Query: 279 KLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFP 338
E + E + C+ C + V K+L + P++ LKRF++ K++K V FP
Sbjct: 367 VTEWLHG-ENMYKCDGCNDYVKASKRLTVRHAPNILTIALKRFQS--GRFGKLNKRVTFP 423
Query: 339 LELDLKPYTSGGQ-NSDVELKYHLYAIVEH--MGSSPTCGHYFSYIRSSPDTWHRLNDSR 395
LDL PY S +DV Y LYA+V H M ++ GHY Y + W+R++D +
Sbjct: 424 ETLDLSPYMSKAVVGTDV---YKLYAVVVHLDMLNASFFGHYVCYTKDFGGNWYRIDDCK 480
Query: 396 VTRVEEEFVLSQDAYILFYAK 416
VTRVE + VLSQ AY+L Y++
Sbjct: 481 VTRVELDDVLSQGAYMLLYSR 501
>gi|224142061|ref|XP_002324377.1| predicted protein [Populus trichocarpa]
gi|222865811|gb|EEF02942.1| predicted protein [Populus trichocarpa]
Length = 489
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 120/321 (37%), Positives = 178/321 (55%), Gaps = 15/321 (4%)
Query: 102 KPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDH 161
KP GL N GN+CF N +LQC T+T PLV L H C +C +C + H
Sbjct: 175 KPRFPPCGLLNCGNSCFANVVLQCLTYTRPLVAYLLEKGHQTECK--HNDWCFLCEFQSH 232
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES 221
+E + + S SP ++ L I +QEDAHEF++ +D ++S CLD +++
Sbjct: 233 VERA-SQSALPFSPMNILSRLRNIGGNLGYGRQEDAHEFMRFAIDTMQSVCLDEFGGEKA 291
Query: 222 L--SSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE-DVGSLGSALESFT 278
+ +SQ I+Q +FGG L S++ C C S+ +E ++DL++EI D SL L FT
Sbjct: 292 VEPASQETTIIQHIFGGRLQSQVICTKCNKISNQFENMMDLTVEIHGDAESLEECLNQFT 351
Query: 279 KLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFP 338
E + E + C+ C + V K+L + + P+V LKRF++ G + K++K V FP
Sbjct: 352 DKEWLHG-ENMYKCDGCNDYVKAWKRLTIQRAPNVLTIALKRFQS-GRFG-KLNKRVTFP 408
Query: 339 LELDLKPYTS-GGQNSDVELKYHLYAIVEH--MGSSPTCGHYFSYIRSSPDTWHRLNDSR 395
LDL PY S G +DV Y LYA+V H M ++ GHY Y + WHR++DS+
Sbjct: 409 ETLDLSPYMSEKGDGADV---YKLYAVVVHVDMLNASFFGHYICYTKDFHGNWHRIDDSK 465
Query: 396 VTRVEEEFVLSQDAYILFYAK 416
V+ VE + VLSQ AY+L Y++
Sbjct: 466 VSSVELDEVLSQGAYMLLYSR 486
>gi|297850108|ref|XP_002892935.1| ubiquitin-specific protease 15 [Arabidopsis lyrata subsp. lyrata]
gi|297338777|gb|EFH69194.1| ubiquitin-specific protease 15 [Arabidopsis lyrata subsp. lyrata]
Length = 926
Score = 195 bits (496), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 116/313 (37%), Positives = 178/313 (56%), Gaps = 13/313 (4%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL N GN+C+ NA+LQ T T PLV L H R C G + +C++C L H+ + L
Sbjct: 443 GLVNCGNSCYANAVLQSLTCTKPLVAYLLRRSHSRSCSG--KDWCLMCELEQHV-MMLRE 499
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSS--QG 226
SG LS +++ ++ I+ QEDAHEFL+ L+ ++S CL+ + + Q
Sbjct: 500 SGGPLSASRILSHMRSINCQIGDGSQEDAHEFLRLLVASMQSICLERLGGETKVDPRLQE 559
Query: 227 DNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIED-VGSLGSALESFTKLEKIED 285
+VQ +FGG L SK++C C S+ YE ++DL+LEI V SL AL FT+ E + D
Sbjct: 560 TTLVQHMFGGRLRSKVKCLRCDHESERYENIMDLTLEIYGWVESLQDALTQFTRPEDL-D 618
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E + C +C V K+L + + P++ LKRF+ +G Y KI+K + FP LD+ P
Sbjct: 619 GENMYRCSRCAGYVRARKELSIHEAPNILTIVLKRFQ-EGRYG-KINKCISFPEMLDMIP 676
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGS--SPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
+ + + DV Y LYA++ H+ + + GHY SY++ W+R++DS + RV
Sbjct: 677 FMT--RTGDVPPLYMLYAVIVHLDTLNASFSGHYISYVKDLRGNWYRIDDSEIHRVPMTQ 734
Query: 404 VLSQDAYILFYAK 416
V+S+ AY+LFY +
Sbjct: 735 VMSEGAYMLFYMR 747
>gi|119613077|gb|EAW92671.1| hCG1807742 [Homo sapiens]
Length = 314
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 111/310 (35%), Positives = 175/310 (56%), Gaps = 17/310 (5%)
Query: 113 LGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLASSGKV 172
+GNTC++NA LQC T+T PL + S +H + C C++C ++ HI +L + G V
Sbjct: 1 MGNTCYVNASLQCLTYTPPLANYMLSREHSQTCH--RHKGCMLCTMQAHITRALHNPGHV 58
Query: 173 LSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDNIVQR 232
+ P + +++ F R +QEDAHEFL +D ++ CL K S+ ++ +
Sbjct: 59 IQPSQA------LAAGFHRGKQEDAHEFLMFTVDAMKKACLPGH-KQVDHHSKDTTLIHQ 111
Query: 233 VFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIEDPETKFTC 292
+FGG S+++C +C SDT++P +D++L+I+ S+ ALE K E++ + E + C
Sbjct: 112 IFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEEL-NGENAYHC 170
Query: 293 EKCKEQVSVEKQLMLDKVPSVAAFHLKRFK-TDGSYVVKIDKHVEFPLELDLKPYTSGGQ 351
C ++ K L L V LKRF G+ KI K+V++P LD++PY S Q
Sbjct: 171 GVCLQRAPASKTLTLHTSAKVLILVLKRFSDVTGN---KIAKNVQYPECLDMQPYMS--Q 225
Query: 352 NSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYI 411
+ L Y LYA++ H G S GHYFSY+++ W++++D+ VT VLSQ AY+
Sbjct: 226 QNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYV 285
Query: 412 LFYAKQGTEW 421
LFY Q +EW
Sbjct: 286 LFYI-QKSEW 294
>gi|296086860|emb|CBI33027.3| unnamed protein product [Vitis vinifera]
Length = 894
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 118/313 (37%), Positives = 174/313 (55%), Gaps = 13/313 (4%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL N GN+C+ NA+LQC T T PL+ L H R C +C++C L H+ + L
Sbjct: 409 GLLNCGNSCYANAVLQCLTCTKPLIIYLLQRSHSRTC--CVTNWCLMCELEKHV-MMLRE 465
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSS--QG 226
SG LSP +++ ++ I+ QEDAHEFL+ L+ ++S CL+ + + + Q
Sbjct: 466 SGGPLSPSRILSHMRSINCQIGDGSQEDAHEFLRLLVTSMQSICLEKLGGEREVDARLQE 525
Query: 227 DNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIED-VGSLGSALESFTKLEKIED 285
+Q FGG L SK++C C S+ YE ++DL+LEI V SL AL FT E + D
Sbjct: 526 TTFIQHTFGGRLRSKVKCLRCHLESERYENIMDLTLEIFGWVESLEDALTQFTTPEDL-D 584
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E + C +C V KQL + + P++ LKRF+ +G Y KI+K + FP LD+ P
Sbjct: 585 GENMYRCRRCTTYVRARKQLSIHEAPNILTIVLKRFQ-EGRY-GKINKCITFPDMLDMIP 642
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGS--SPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
+ +G DV Y LYA+V HM + + GHY +Y++ W R++D+ V V
Sbjct: 643 FMTG--TYDVPPLYMLYAVVVHMDTLNASFSGHYVAYVKDLQGNWFRVDDAEVQPVSTNQ 700
Query: 404 VLSQDAYILFYAK 416
V+S+ AYILFY +
Sbjct: 701 VMSEGAYILFYMR 713
>gi|359494410|ref|XP_002266179.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15-like [Vitis
vinifera]
Length = 906
Score = 195 bits (495), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 118/313 (37%), Positives = 174/313 (55%), Gaps = 13/313 (4%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL N GN+C+ NA+LQC T T PL+ L H R C +C++C L H+ + L
Sbjct: 380 GLLNCGNSCYANAVLQCLTCTKPLIIYLLQRSHSRTC--CVTNWCLMCELEKHV-MMLRE 436
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSS--QG 226
SG LSP +++ ++ I+ QEDAHEFL+ L+ ++S CL+ + + + Q
Sbjct: 437 SGGPLSPSRILSHMRSINCQIGDGSQEDAHEFLRLLVTSMQSICLEKLGGEREVDARLQE 496
Query: 227 DNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIED-VGSLGSALESFTKLEKIED 285
+Q FGG L SK++C C S+ YE ++DL+LEI V SL AL FT E + D
Sbjct: 497 TTFIQHTFGGRLRSKVKCLRCHLESERYENIMDLTLEIFGWVESLEDALTQFTTPEDL-D 555
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E + C +C V KQL + + P++ LKRF+ +G Y KI+K + FP LD+ P
Sbjct: 556 GENMYRCRRCTTYVRARKQLSIHEAPNILTIVLKRFQ-EGRY-GKINKCITFPDMLDMIP 613
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGS--SPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
+ +G DV Y LYA+V HM + + GHY +Y++ W R++D+ V V
Sbjct: 614 FMTG--TYDVPPLYMLYAVVVHMDTLNASFSGHYVAYVKDLQGNWFRVDDAEVQPVSTNQ 671
Query: 404 VLSQDAYILFYAK 416
V+S+ AYILFY +
Sbjct: 672 VMSEGAYILFYMR 684
>gi|168011115|ref|XP_001758249.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690705|gb|EDQ77071.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 430
Score = 195 bits (495), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 116/313 (37%), Positives = 173/313 (55%), Gaps = 12/313 (3%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL N GN+CF NA+LQC THT PLV L DH R C + +C +CAL+ H +
Sbjct: 97 GLVNCGNSCFANAVLQCLTHTQPLVAYLLGGDHGRHCKCISVDWCFMCALQQHAVKVIQQ 156
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESL--SSQG 226
+ SP ++ +L+ I QEDAHEF+ + ++S CLD + ++ ++
Sbjct: 157 --RPFSPSNILSHLSNIGRGLDFGNQEDAHEFMISAIHLMQSICLDGAGGENAVDACTEE 214
Query: 227 DNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEI-EDVGSLGSALESFTKLEKIED 285
++ +FGG L S++ C C S++YE ++DL++EI +V SL AL F+ E +
Sbjct: 215 TTLIHHIFGGLLQSQVTCKQCRHQSNSYEIMMDLTVEINRNVRSLEDALAQFSAHEFLHG 274
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E K+ C++C V K++ + + P+V LKRFK G K+ K V FP LDL P
Sbjct: 275 -ENKYKCDRCDAYVDAYKRIAVHEAPNVLVVTLKRFK--GGRYEKLTKEVVFPEILDLTP 331
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTC--GHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
Y S +N D Y+LYA+V H+ S GHYF + + W+R++D +VT V +
Sbjct: 332 YMS--ENGDRPPHYNLYAVVVHVNESNASHYGHYFCLVMNPSSHWYRVDDMKVTEVSVNW 389
Query: 404 VLSQDAYILFYAK 416
V SQ+AYIL Y +
Sbjct: 390 VTSQEAYILLYKR 402
>gi|326930828|ref|XP_003211542.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like [Meleagris
gallopavo]
Length = 874
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 109/332 (32%), Positives = 177/332 (53%), Gaps = 17/332 (5%)
Query: 144 PCDGATEGFCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQC 203
P D GFC++C +++H+ + A+SG + P + +L I+ F+ QEDAHEFL+
Sbjct: 11 PGDSHQGGFCMMCVMQNHMIQAFANSGNAIKPVSFIRDLKKIARHFRFGSQEDAHEFLRY 70
Query: 204 LLDRLESCCLDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE 263
+D ++ CL T+ + +Q +V ++FGG L S+++C C S SDTY+P +D+SLE
Sbjct: 71 TIDAMQKACLSGCTRLDR-QTQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVSLE 129
Query: 264 IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKT 323
I ++ ALE F K + + E + C +CK++V K+ + + +V LKRF
Sbjct: 130 IRQAANIVRALELFVKSDVLSG-ENAYMCARCKKKVPASKRFTIHRASNVLTLSLKRFAN 188
Query: 324 DGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRS 383
KI K V +P L+++PY S QN+ + Y LYA++ H G S GHY+ Y+++
Sbjct: 189 FSGG--KITKDVGYPEFLNIRPYMS--QNTGDPVMYGLYAVLVHSGYSCHAGHYYCYVKA 244
Query: 384 SPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEWVSSLLEAESIGMNADISNSSPK 443
S W+++NDS V + VL+Q AY+LFY + + G I+ +SP
Sbjct: 245 SNGQWYQMNDSLVHCSNIKVVLNQQAYVLFYLR---------IPGPRKGSEGPIAKASPS 295
Query: 444 SVLDNVENDYTSRSGVANAESCKANEPSASAG 475
V +D T R+ + A+ P + G
Sbjct: 296 H--SPVVSDQTKRTATNGPPAVTASGPGEAEG 325
>gi|225462100|ref|XP_002271760.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 25-like [Vitis
vinifera]
Length = 631
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 119/343 (34%), Positives = 186/343 (54%), Gaps = 27/343 (7%)
Query: 84 WGSSLLSRPVEKHWPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPR 143
W SLL Q + G GL+NLGN+C++N++LQC T+T PL + H
Sbjct: 3 WQPSLLH---------QKRKNGPPLGLKNLGNSCYLNSVLQCLTYTPPLANFCLNHLHSS 53
Query: 144 PCDGATEGF--CVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFL 201
CD A + C C L I SL+ +P K+ L + F+ +QEDAHEFL
Sbjct: 54 LCDSAVDRKRECPFCILEKRIVRSLSMDLTQDAPSKIQSCLRIFAEHFRLGRQEDAHEFL 113
Query: 202 QCLLDRLESCCLDSKTKDESLSSQGDN--------IVQRVFGGCLISKLQCCNCGSCSDT 253
+ ++D + CL K L +G+N +V+ +FGG L S+++C +CG+ S+
Sbjct: 114 RYVIDACHNTCLRLK----KLRRKGNNDNGPSTTSVVKDIFGGALQSQVKCLSCGAESNK 169
Query: 254 YEPLIDLSLEIEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSV 313
+ ++D+SL++ SL AL++F + E + D K+ C+ CK+ VS KQ+ + + P+V
Sbjct: 170 TDEIMDISLDVLHFNSLKQALQNFFQPE-VLDGNNKYKCDNCKKLVSARKQMSILQAPNV 228
Query: 314 AAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPT 373
LKRF +G Y KIDK + F L L Y + + D +Y+L+A + H G SP
Sbjct: 229 LVIQLKRF--EGLYGGKIDKLIAFEEVLVLSSYMNKA-SQDSHPEYNLFATIVHSGYSPE 285
Query: 374 CGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAK 416
GHY++YI+ + W+ NDS V+ + VLS+ YILF+++
Sbjct: 286 SGHYYAYIKDAMGRWYCCNDSYVSLSTLQGVLSEKVYILFFSR 328
>gi|444520452|gb|ELV13004.1| Ubiquitin carboxyl-terminal hydrolase 17-like protein 2 [Tupaia
chinensis]
Length = 442
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 110/305 (36%), Positives = 171/305 (56%), Gaps = 14/305 (4%)
Query: 113 LGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLASSGKV 172
+GNTC++NA LQC T+T P+ + S +H + C +GFC++C ++ HI L G +
Sbjct: 1 MGNTCYMNAALQCLTYTPPIANYMLSQEHSQTCH--HQGFCMLCIMQAHITWVLQHPGSI 58
Query: 173 LSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDNIVQR 232
+ P +++ F R +QEDAHEFL L+ ++ L S K S+ +++
Sbjct: 59 IQPSYA------LAASFHRNEQEDAHEFLMFTLEAMQEASL-SGQKHFDHPSEDSTLIRA 111
Query: 233 VFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIEDPETKFTC 292
+FGG S+++C +C S SDT++P +D+SL+I+ S+ ALE K E++ D E + C
Sbjct: 112 IFGGYWRSQIKCLHCHSVSDTFDPYLDISLDIKTAQSVSQALEELVKPEEL-DGENAYHC 170
Query: 293 EKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPYTSGGQN 352
C E+ K L L V LKRF K K V++P LD++ YTS +
Sbjct: 171 SVCLERRLASKTLTLHASSKVLILVLKRFSDFTG--EKTTKAVQYPECLDMQTYTS--EQ 226
Query: 353 SDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYIL 412
+ L Y LYA++ H GSS GHYF YI++ W++++D+ VT + VLSQ AY+L
Sbjct: 227 NRGPLIYGLYAVLVHAGSSCHNGHYFCYIKAGNGQWYKMDDAEVTACDVTVVLSQPAYVL 286
Query: 413 FYAKQ 417
FY ++
Sbjct: 287 FYVQK 291
>gi|345806352|ref|XP_851787.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Canis lupus familiaris]
Length = 535
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 113/313 (36%), Positives = 173/313 (55%), Gaps = 15/313 (4%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL+N+GNTC++NA LQC T+T PL + S H C T C++C L+ H+
Sbjct: 78 VGAGLQNMGNTCYVNATLQCLTYTEPLASYMLSQQHGTTCRRQTS--CMLCTLQAHLTRV 135
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
L G+V + L + + F R++QEDAHE+L +LD ++ CL + Q
Sbjct: 136 LCHPGRV------LRPLPLLLAAFHRHKQEDAHEYLMFILDAMQQACLPEDKLSDPECPQ 189
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
++Q++FGG S++QC +C S T EP +D+SL+I S+ ALE K E +E
Sbjct: 190 DSTLIQQLFGGYWRSQIQCLHCQGISSTLEPYLDISLDIGAAHSVSQALEQLVKPELLEG 249
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK-TDGSYVVKIDKHVEFPLELDLK 344
E + C KC E+V K L L P V L+RF G+ K+ K V +P LD++
Sbjct: 250 -ENAYHCSKCLEKVPASKVLTLHTSPKVLILVLRRFSDLTGN---KMTKEVRYPERLDMQ 305
Query: 345 PYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFV 404
+ Q + + L Y LYA++ H G S GHYF ++++ W++++D++V+ +
Sbjct: 306 -HCLSEQRAGL-LVYVLYAVLVHAGRSCHSGHYFCFVKAGNGQWYKMDDAKVSACDVTCA 363
Query: 405 LSQDAYILFYAKQ 417
L Q AYILFY ++
Sbjct: 364 LHQPAYILFYMQK 376
>gi|296086774|emb|CBI32923.3| unnamed protein product [Vitis vinifera]
Length = 635
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 119/343 (34%), Positives = 186/343 (54%), Gaps = 27/343 (7%)
Query: 84 WGSSLLSRPVEKHWPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPR 143
W SLL Q + G GL+NLGN+C++N++LQC T+T PL + H
Sbjct: 7 WQPSLLH---------QKRKNGPPLGLKNLGNSCYLNSVLQCLTYTPPLANFCLNHLHSS 57
Query: 144 PCDGATEGF--CVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFL 201
CD A + C C L I SL+ +P K+ L + F+ +QEDAHEFL
Sbjct: 58 LCDSAVDRKRECPFCILEKRIVRSLSMDLTQDAPSKIQSCLRIFAEHFRLGRQEDAHEFL 117
Query: 202 QCLLDRLESCCLDSKTKDESLSSQGDN--------IVQRVFGGCLISKLQCCNCGSCSDT 253
+ ++D + CL K L +G+N +V+ +FGG L S+++C +CG+ S+
Sbjct: 118 RYVIDACHNTCLRLK----KLRRKGNNDNGPSTTSVVKDIFGGALQSQVKCLSCGAESNK 173
Query: 254 YEPLIDLSLEIEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSV 313
+ ++D+SL++ SL AL++F + E + D K+ C+ CK+ VS KQ+ + + P+V
Sbjct: 174 TDEIMDISLDVLHFNSLKQALQNFFQPE-VLDGNNKYKCDNCKKLVSARKQMSILQAPNV 232
Query: 314 AAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPT 373
LKRF +G Y KIDK + F L L Y + + D +Y+L+A + H G SP
Sbjct: 233 LVIQLKRF--EGLYGGKIDKLIAFEEVLVLSSYMNKA-SQDSHPEYNLFATIVHSGYSPE 289
Query: 374 CGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAK 416
GHY++YI+ + W+ NDS V+ + VLS+ YILF+++
Sbjct: 290 SGHYYAYIKDAMGRWYCCNDSYVSLSTLQGVLSEKVYILFFSR 332
>gi|6681237|ref|NP_031913.1| ubiquitin carboxyl-terminal hydrolase DUB-1 [Mus musculus]
gi|2501457|sp|Q61068.1|UBPW_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase DUB-1; AltName:
Full=Deubiquitinating enzyme 1; AltName: Full=Ubiquitin
thioesterase DUB-1; AltName:
Full=Ubiquitin-specific-processing protease DUB-1
gi|1302630|gb|AAC52532.1| DUB-1 [Mus musculus]
gi|148684794|gb|EDL16741.1| mCG66629 [Mus musculus]
Length = 526
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 111/318 (34%), Positives = 179/318 (56%), Gaps = 16/318 (5%)
Query: 103 PTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHI 162
P G G GL+N GN+C++NA LQC THT PL + S +H + C + EG C +CA+ +
Sbjct: 46 PQGPGCGLQNTGNSCYLNAALQCLTHTPPLADYMLSQEHSQTC-CSPEG-CKLCAMEALV 103
Query: 163 ELSL--ASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDE 220
SL + SG V+ P + ++S F ++QQEDAHEFL L+ + CL + +
Sbjct: 104 TQSLLHSHSGDVMKPSHI------LTSAFHKHQQEDAHEFLMFTLETMHESCLQVHRQSK 157
Query: 221 SLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKL 280
+S+ + + +FGG S+++C C SDTY+ +D+ L+I S+ AL K
Sbjct: 158 P-TSEDSSPIHDIFGGWWRSQIKCLLCQGTSDTYDRFLDIPLDISSAQSVKQALWDTEKS 216
Query: 281 EKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE 340
E++ + + C KC++++ K L + P V L RF K+D+ V +P
Sbjct: 217 EELCG-DNAYYCGKCRQKMPASKTLHVHIAPKVLMVVLNRFSAFTGN--KLDRKVSYPEF 273
Query: 341 LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVE 400
LDLKPY S + + L Y LYA++ H G++ GHYF +++ W++++D++VTR +
Sbjct: 274 LDLKPYLS--EPTGGPLPYALYAVLVHDGATSHSGHYFCCVKAGHGKWYKMDDTKVTRCD 331
Query: 401 EEFVLSQDAYILFYAKQG 418
VL+++AY+LFY +Q
Sbjct: 332 VTSVLNENAYVLFYVQQA 349
>gi|414869933|tpg|DAA48490.1| TPA: putative ubiquitin carboxyl-terminal hydrolase superfamily
protein [Zea mays]
Length = 973
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 119/330 (36%), Positives = 184/330 (55%), Gaps = 19/330 (5%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGN+C+ NA+ QC T PL L H + C + G+C +C L
Sbjct: 461 GLHNLGNSCYANAVFQCLMFTRPLTTYLLEGLHSKNC--SQNGWCFMCEFEK-----LIV 513
Query: 169 SGK----VLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESL-S 223
GK LSP ++ +LN I S F +QEDAHEFL+ +D ++S C+ K L S
Sbjct: 514 EGKRRKIALSPTGILSHLNDIGSSFGPGKQEDAHEFLRYAIDAMQSVCMKEARKGGVLQS 573
Query: 224 SQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE-DVGSLGSALESFTKLEK 282
++ +VQ +FGG L SK++C C S+ EP++DL++EI+ D+ SLG AL FT E
Sbjct: 574 AEETTLVQLIFGGYLRSKIKCSRCHVSSEQCEPMLDLTVEIDGDISSLGEALVRFTSTE- 632
Query: 283 IEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELD 342
+ D E K+ C +CK +K+L +++ P++ LKR+++ G + KI K + FP L+
Sbjct: 633 VLDGENKYHCSRCKSYERAKKKLTIEEAPNILTIALKRYQS-GKF-GKISKAIRFPETLN 690
Query: 343 LKPYTSGGQNSDVELKYHLYAIVEH--MGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVE 400
L Y + + D+ Y LYA+V H + ++ GHY Y++ + W + +DS+V V
Sbjct: 691 LARYMNPDTD-DISPVYSLYAVVVHHDVMNAAFSGHYVCYVKDTQGKWFKADDSQVKPVS 749
Query: 401 EEFVLSQDAYILFYAKQGTEWVSSLLEAES 430
+ V+S+ AY+L YA+ SS+ +A S
Sbjct: 750 LDNVMSKCAYMLLYARCSPRAPSSVRQAMS 779
>gi|356546765|ref|XP_003541793.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15-like [Glycine
max]
Length = 990
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 117/313 (37%), Positives = 175/313 (55%), Gaps = 13/313 (4%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL N GN+C+ NA+LQC T T PLV L H + C + +C++C L HI + L
Sbjct: 472 GLLNCGNSCYANAVLQCLTSTKPLVVYLLYRSHSKAC--CAKDWCLMCELEKHI-MVLRE 528
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSS--QG 226
+G LSP +++ ++ I+ QEDAHEFL+ L+ ++S CL++ ++ + Q
Sbjct: 529 NGDPLSPSRILWHMRSINCHMGEGNQEDAHEFLRLLIASMQSICLEALGGEKKVDPRLQE 588
Query: 227 DNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIED-VGSLGSALESFTKLEKIED 285
+Q FGG L SK++C C S+ YE ++DL+LEI V SL AL FT E + D
Sbjct: 589 TTFIQHTFGGRLQSKVKCLKCNHESERYENIMDLTLEILGWVESLEDALTQFTSPEDL-D 647
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E + C +C V KQL + + P++ LKRF+ +G Y KI+K + FP LD+ P
Sbjct: 648 GENMYRCGRCTSYVRARKQLSIHEAPNILTIVLKRFQ-EGRY-GKINKCITFPEMLDMIP 705
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGS--SPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
+ +G D+ Y LYA+V H+ + + GHY SY++ W R++D V V
Sbjct: 706 FMTG--TGDIPPLYMLYAVVVHLDTLNASFSGHYVSYVKDLQGNWFRIDDIEVQPVLVNQ 763
Query: 404 VLSQDAYILFYAK 416
V+S+ AYILFY +
Sbjct: 764 VMSEGAYILFYMR 776
>gi|297825441|ref|XP_002880603.1| ubiquitin carboxyl-terminal hydrolase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297326442|gb|EFH56862.1| ubiquitin carboxyl-terminal hydrolase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 650
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 114/321 (35%), Positives = 175/321 (54%), Gaps = 15/321 (4%)
Query: 102 KPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDH 161
+P GL N GN+CF N +LQC + T PLV L H R C +C C +H
Sbjct: 168 RPIMAPCGLTNCGNSCFANVVLQCLSWTRPLVAYLLERGHKREC--RRNDWCFFCEFENH 225
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES 221
++ + S SP ++ L I +QEDAHE ++ +D ++S CLD ++
Sbjct: 226 LDRANHSRFP-FSPMNIISRLPNIGGNLGYGRQEDAHELMRSAIDMMQSVCLDEFGGEKV 284
Query: 222 L--SSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE-DVGSLGSALESFT 278
+ +Q ++Q +FGG L S++QC C + SD YE ++DL++EI D SL L+ FT
Sbjct: 285 VPPRAQETTLIQYIFGGLLQSQVQCTACSNVSDQYENMMDLTVEIHGDAVSLEECLDQFT 344
Query: 279 KLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFP 338
E ++ + + C++C + V K+L + P++ LKRF+ G K++K + FP
Sbjct: 345 AKEWLQG-DNLYKCDRCDDYVKACKRLSIRCAPNILTIALKRFQ--GGRFGKLNKRISFP 401
Query: 339 LELDLKPYTSGG-QNSDVELKYHLYAIVEH--MGSSPTCGHYFSYIRSSPDTWHRLNDSR 395
DL PY S G + SDV Y LYA++ H M ++ GHY Y++ W+R++DS
Sbjct: 402 ETFDLGPYMSSGVEGSDV---YKLYAVIVHLDMLNASFFGHYICYVKDFRGNWYRIDDSE 458
Query: 396 VTRVEEEFVLSQDAYILFYAK 416
V +VE E VLSQ AY+L Y++
Sbjct: 459 VEKVELEDVLSQRAYMLLYSR 479
>gi|291411127|ref|XP_002721844.1| PREDICTED: deubiquitinating enzyme 3-like [Oryctolagus cuniculus]
Length = 530
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 108/316 (34%), Positives = 175/316 (55%), Gaps = 14/316 (4%)
Query: 102 KPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDH 161
+P G+GAGL+N GNTC++NA LQC T+T PL + S H + C + C++CA+ H
Sbjct: 76 RPYGIGAGLQNTGNTCYLNAALQCLTYTPPLANYMLSQVHSQSCRRSDR--CILCAVETH 133
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES 221
+L S G V+ P ++ +++ F +QEDAHEFL LD L++ L T D
Sbjct: 134 FLWALHSPGDVIQPCQV------LAAGFHTNRQEDAHEFLMFALDVLKAVGLPGLT-DGV 186
Query: 222 LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLE 281
+ + Q++ GG S++QC C S+T +P ++++L+I+ S+ AL+ + E
Sbjct: 187 GPQEDQSPSQQIVGGHWRSQIQCLQCQGISETLDPYLEIALDIKTADSVEQALQHLVQPE 246
Query: 282 KIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLEL 341
++ E + C C ++ + K L L V F LKRF K+ V +P L
Sbjct: 247 ELAG-ENAYHCATCLQKTAASKTLTLQSAGKVLLFVLKRFSEFTGE--KLGGQVHYPECL 303
Query: 342 DLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEE 401
D++PY S Q + L Y LYA++ H+G GHYF Y+++ W++++D++VT +
Sbjct: 304 DMRPYMS--QQNGRPLDYVLYAVLVHVGLRCQSGHYFCYVKAGNGHWYKMDDAKVTACDT 361
Query: 402 EFVLSQDAYILFYAKQ 417
VL+Q AY+LFY ++
Sbjct: 362 TCVLNQSAYVLFYVRK 377
>gi|379030626|ref|NP_001243798.1| inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 7
[Homo sapiens]
gi|187653908|sp|P0C7H9.1|U17L7_HUMAN RecName: Full=Inactive ubiquitin carboxyl-terminal hydrolase
17-like protein 7
Length = 530
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 111/321 (34%), Positives = 178/321 (55%), Gaps = 17/321 (5%)
Query: 102 KPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDH 161
+P VGAGL+ +GNT ++N LQC T+TLPL + S + + C C+ C ++ H
Sbjct: 74 RPAAVGAGLQKIGNTFYVNVSLQCLTYTLPLSNYMLSREDSQTCH--LHKCCMFCTMQAH 131
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES 221
I +L S G V+ P ++ +++ F R +QEDAHEFL +D ++ CL K
Sbjct: 132 ITWALHSPGHVIQPSQV------LAAGFHRGEQEDAHEFLMFTVDAMKKACLPGH-KQLD 184
Query: 222 LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLE 281
S+ ++ ++FG S+++ +C SDT++P +D++L+I+ S+ ALE K +
Sbjct: 185 HHSKDTTLIHQIFGAYWRSQIKYLHCHGVSDTFDPYLDIALDIQAAQSVKQALEQLVKPK 244
Query: 282 KIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK-TDGSYVVKIDKHVEFPLE 340
++ + E + C C ++ K L L V LKRF G+ K+ K+V++P
Sbjct: 245 EL-NGENAYHCGLCLQKAPASKTLTLPTSAKVLILVLKRFSDVTGN---KLAKNVQYPKC 300
Query: 341 LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVE 400
D++PY S Q + L Y LYA++ H G S GHYFSY+++ W++++D+ VT
Sbjct: 301 RDMQPYMS--QQNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASG 358
Query: 401 EEFVLSQDAYILFYAKQGTEW 421
VLSQ AY+LFY Q +EW
Sbjct: 359 ITSVLSQQAYVLFYI-QKSEW 378
>gi|356497712|ref|XP_003517703.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Glycine
max]
Length = 927
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 117/313 (37%), Positives = 177/313 (56%), Gaps = 14/313 (4%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL N GN+C+ NA+LQC +T PL L H + C +G+C C I+ A
Sbjct: 413 GLTNCGNSCYANAVLQCLAYTRPLTSYLFQGFHSKRCQ--KKGWCFTCEFEYLIQK--AK 468
Query: 169 SG-KVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGD 227
G LSP ++ ++ I S R ++EDAHEFL+C +D ++S CL L+ +
Sbjct: 469 EGISPLSPIGILSKIHKIGSHLGRGKEEDAHEFLRCAVDTMQSVCLKEVGVSSPLAEE-T 527
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE-DVGSLGSALESFTKLEKIEDP 286
+V FGG L SK++C C S+ YE ++DL++EI+ D+G+L AL FT E I D
Sbjct: 528 TLVGYTFGGYLRSKIKCLRCLGKSERYERMMDLTVEIDGDIGTLEEALGQFTAPE-ILDK 586
Query: 287 ETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPY 346
+ K+ C +CK K+L + + P++ LKRF++ G++ K++K V+FP L++ PY
Sbjct: 587 DNKYNCSRCKTYEKARKKLTVLEAPNILTIVLKRFQS-GNFE-KLNKSVQFPEVLNMAPY 644
Query: 347 TSGGQNSDVELKYHLYAIVEHMG--SSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFV 404
SG + D Y LYA+V H+ ++ GHY Y+++ W R +DSRV VE V
Sbjct: 645 MSGTK--DKSPLYSLYAVVVHLDIMNAAFSGHYVCYVKNIQGEWFRTDDSRVEPVELSRV 702
Query: 405 LSQDAYILFYAKQ 417
LS+ AY+L YA+
Sbjct: 703 LSERAYMLLYARH 715
>gi|449479063|ref|XP_002187377.2| PREDICTED: uncharacterized protein LOC100225609 [Taeniopygia
guttata]
Length = 819
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 118/320 (36%), Positives = 184/320 (57%), Gaps = 11/320 (3%)
Query: 107 GAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSL 166
GAGL NLGNTC+INAILQC T+T PL L S++H C +GFC++C + H+ L
Sbjct: 127 GAGLFNLGNTCYINAILQCLTYTPPLANYLLSYEHSLSCQ--QQGFCMMCTMEAHVRKVL 184
Query: 167 ASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQG 226
+SS + P ++ +L +I F+ +QE+A++FL+ LD + CL + +SSQ
Sbjct: 185 SSSASAILPGAVLRDLKFIGEEFEYDRQENAYKFLRRTLDAMHRACLSC---NLDVSSQE 241
Query: 227 DNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIEDP 286
IV ++F G + S++ C +C + D+Y+ +D+SL+I+ SL + LE +++ D
Sbjct: 242 TTIVHQIFRGFMKSRVTCLSCQAVVDSYKAFLDVSLDIKAASSLTTVLEDCVTPKQL-DQ 300
Query: 287 ETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPY 346
+ F C KCK++ + K++ + + P V L+R D KI+K VE+P LDL+PY
Sbjct: 301 KGCFRCSKCKKKAAASKKVTVHRAPRVLTLCLER--ADQWTGTKINKFVEYPEYLDLRPY 358
Query: 347 TSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLS 406
S + L LYAIV H G + GH+ Y+++S W+R++D V + VL
Sbjct: 359 MS--DTAGEPLLCSLYAIVIHSGDTCLEGHFLCYVKASNGLWYRMDDESVDNCDIHTVLG 416
Query: 407 QDAYILFYAKQ-GTEWVSSL 425
Q AY+LFYA+ G W +L
Sbjct: 417 QQAYLLFYARAPGQHWPHAL 436
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 107 GAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSL 166
GAGL NLGNTC+INAILQC T+T PL L S++H C +GFC++C + H+ L
Sbjct: 24 GAGLFNLGNTCYINAILQCLTYTPPLANYLLSYEHSLSCQ--QQGFCMMCTMEAHVRKVL 81
Query: 167 ASSGKVLSPRKLVDNLNYIS 186
+SS + P ++ +L YIS
Sbjct: 82 SSSASAILPGAVLRDLKYIS 101
>gi|331232103|ref|XP_003328714.1| hypothetical protein PGTG_10673 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309307704|gb|EFP84295.1| hypothetical protein PGTG_10673 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 690
Score = 193 bits (491), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 118/359 (32%), Positives = 188/359 (52%), Gaps = 22/359 (6%)
Query: 93 VEKHWPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDH--PRPCDGA-T 149
V +W I+P +G G N GNTCF+NA LQ HT L L D P CD A
Sbjct: 168 VATYW---IRPQPIGPGFYNTGNTCFLNATLQALVHTPALAIGLMDRDEHSPESCDLARA 224
Query: 150 EGFCVICALRDHIELSL--ASSGK-VLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLD 206
+ FC +C + + + AS G + P + L+ + + +QEDAHEFL+ L++
Sbjct: 225 KKFCALCRMYRLVNMCFDKASYGSHAIEPSPINRALSKFAPTMRGGRQEDAHEFLRLLVE 284
Query: 207 RLESCCLDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIED 266
+++ L + + + V R+FGG L S++ C +C + SDT++ +DLSL+I
Sbjct: 285 AMQNGALQGRAEKAKQKQKESTFVHRMFGGKLRSRVVCEHCNTPSDTFDNFLDLSLDISQ 344
Query: 267 VGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGS 326
S+ SAL+++ K +++ ++ C+KCK +K + + P + HLKRF G
Sbjct: 345 ANSVSSALKAYHKFDRLRG-ANQYKCDKCKCLRDAKKSMSVFSAPPILTLHLKRFNFRGR 403
Query: 327 YVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPD 386
KI+K V F LDLKP S SD+ Y LYA+V H G S GHY++++++S
Sbjct: 404 ---KINKRVNFEDSLDLKPAMSN--ESDI-TGYKLYAVVCHRGQSNKSGHYYAHVKASNG 457
Query: 387 TWHRLNDSRVTRVEEE--FVLSQDAYILFYAKQGTEWVSSLL----EAESIGMNADISN 439
W+ +DS V + + + ++ AYILFYA+ +S+ + ++ S N+D N
Sbjct: 458 KWYVADDSTVESISDSRTVLANEHAYILFYARDRESLLSAAIAGNRQSTSTTTNSDGGN 516
>gi|34324152|gb|AAN10252.1| deubiquitinating enzyme [Mus musculus]
Length = 526
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 111/318 (34%), Positives = 178/318 (55%), Gaps = 16/318 (5%)
Query: 103 PTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHI 162
P G G GL+N GN+C++NA LQC THT PL + S +H + C + EG C +CA+ H+
Sbjct: 46 PQGPGCGLQNTGNSCYLNAALQCLTHTPPLADYMLSQEHSQTC-CSPEG-CKMCAMEAHV 103
Query: 163 ELSL--ASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDE 220
SL + SG V+ P + ++S F ++QQEDAHEFL L+ + CL + +
Sbjct: 104 TQSLLHSHSGDVMKPSHI------LTSAFHKHQQEDAHEFLMFTLETMHESCLQVHRQSK 157
Query: 221 SLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKL 280
+S+ + +FGG S+++C C SDTY+ +D+ L+I S+ AL K
Sbjct: 158 P-TSEDSLPIHDIFGGWWRSQIKCLLCQGTSDTYDRFLDIPLDISSAQSVKQALWDTEKS 216
Query: 281 EKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE 340
E++ + + C KC++++ K L + P V L RF K+D+ V +P
Sbjct: 217 EELCG-DNAYYCGKCRQKMPASKTLHVHIAPKVLMVVLNRFSAFTGN--KLDRKVSYPEF 273
Query: 341 LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVE 400
LDLKPY S + + L Y LYA++ H G++ GHYF +++ W++++D++VTR +
Sbjct: 274 LDLKPYLS--EPTGGPLPYTLYAVLVHDGATSHSGHYFCCVKAGHGKWYKMDDTKVTRCD 331
Query: 401 EEFVLSQDAYILFYAKQG 418
VL+++AY+L Y +Q
Sbjct: 332 VTSVLNENAYVLSYVQQA 349
>gi|255577279|ref|XP_002529521.1| cysteine-type endopeptidase, putative [Ricinus communis]
gi|223531005|gb|EEF32859.1| cysteine-type endopeptidase, putative [Ricinus communis]
Length = 644
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 117/355 (32%), Positives = 187/355 (52%), Gaps = 32/355 (9%)
Query: 81 RYNWGSSLLSRPVEKHWPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFD 140
+ +W SLLS+ + P+ GL NLGN+C++N++LQC T+T PL
Sbjct: 6 QMSWQPSLLSQKRKNRPPL---------GLRNLGNSCYLNSVLQCLTYTPPLANFCLRLQ 56
Query: 141 HPRPCDGATEGF----CVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQED 196
H CD + G C C L I SL+ + +P K+ L + F+ QQED
Sbjct: 57 HSSLCDSVSNGERKRECPFCILEKRIVRSLSLDLTLDAPAKIQSCLKIFAEHFKGGQQED 116
Query: 197 AHEFLQCLLDRLESCCLD-SKTKDESLSSQGDN--------------IVQRVFGGCLISK 241
AHEFL+ ++D + CL K + + ++S N +V+ +FGG L S+
Sbjct: 117 AHEFLRYVIDACHNTCLRLMKLRRKGINSNNKNYDNDTTTSTSTSTSVVKEIFGGTLQSQ 176
Query: 242 LQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSV 301
++C +C S S+ + ++D+SL++ SL A++ F + E I D K+ CE CK+ V+
Sbjct: 177 VKCLSCHSESNKVDEIMDISLDVLHSNSLREAMQKFFQPE-ILDGNNKYRCESCKKLVAA 235
Query: 302 EKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHL 361
KQ+ + + P++ LKRF +G + KIDK + F L L + G + D +Y+L
Sbjct: 236 RKQMSILQAPNILVIQLKRF--EGIFGGKIDKAIAFEEVLVLSSFMCKG-SQDPRPEYNL 292
Query: 362 YAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAK 416
+ + H G SP GHY++YI+ + W+ NDS VT + VLS+ YILF+++
Sbjct: 293 FGTIVHSGYSPESGHYYAYIKDATGRWYCCNDSYVTLSTMQDVLSEKVYILFFSR 347
>gi|115445271|ref|NP_001046415.1| Os02g0244300 [Oryza sativa Japonica Group]
gi|113535946|dbj|BAF08329.1| Os02g0244300 [Oryza sativa Japonica Group]
Length = 975
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 120/313 (38%), Positives = 177/313 (56%), Gaps = 13/313 (4%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL N GN+C+ NA+LQC T PL+ L H + C ++ +C++C L + +L
Sbjct: 442 GLFNCGNSCYANAVLQCLMCTKPLMIYLLLRLHSKDC--CSKNWCLMCELEQYAS-TLRE 498
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESL--SSQG 226
SG +SP +++ NL I QEDAHEFL+ L+ ++ CLD ++ + S Q
Sbjct: 499 SGGPVSPSRILSNLRNIGCRLGGGSQEDAHEFLRHLVMSMQGACLDGLGGEKQVEASLQE 558
Query: 227 DNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIED-VGSLGSALESFTKLEKIED 285
++Q++FGG L SK++C C S+ YE ++DL+LEI V SL AL FT E + D
Sbjct: 559 TTLIQQMFGGRLKSKVKCLRCYHESERYENIMDLTLEIHGWVESLQDALTQFTAPEDL-D 617
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E + C +C V KQL + +VP++ LKRF+T G Y KI+K V FP LD+ P
Sbjct: 618 GENMYKCGRCSAYVKARKQLSVHEVPNILTVVLKRFQT-GKYG-KINKCVTFPDMLDMVP 675
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGS--SPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
+ +G D Y LYA+V H+ + + GHY SY++ TW R++DS V V
Sbjct: 676 FVTGA--GDNPPLYFLYAVVVHVDTENASFSGHYISYVKDMQGTWLRIDDSEVQAVSLNQ 733
Query: 404 VLSQDAYILFYAK 416
V+S+ AY+LFY +
Sbjct: 734 VMSEGAYMLFYMR 746
>gi|218190388|gb|EEC72815.1| hypothetical protein OsI_06524 [Oryza sativa Indica Group]
Length = 808
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 120/313 (38%), Positives = 177/313 (56%), Gaps = 13/313 (4%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL N GN+C+ NA+LQC T PL+ L H + C ++ +C++C L + +L
Sbjct: 275 GLFNCGNSCYANAVLQCLMCTKPLMIYLLLRLHSKDC--CSKNWCLMCELEQYAS-TLRE 331
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESL--SSQG 226
SG +SP +++ NL I QEDAHEFL+ L+ ++ CLD ++ + S Q
Sbjct: 332 SGGPVSPSRILSNLRNIGCRLGGGSQEDAHEFLRHLVMSMQGACLDGLGGEKQVEASLQE 391
Query: 227 DNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIED-VGSLGSALESFTKLEKIED 285
++Q++FGG L SK++C C S+ YE ++DL+LEI V SL AL FT E + D
Sbjct: 392 TTLIQQMFGGRLKSKVKCLRCYHESERYENIMDLTLEIHGWVESLQDALTQFTAPEDL-D 450
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E + C +C V KQL + +VP++ LKRF+T G Y KI+K V FP LD+ P
Sbjct: 451 GENMYKCGRCSAYVKARKQLSVHEVPNILTVVLKRFQT-GKYG-KINKCVTFPDMLDMVP 508
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGS--SPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
+ +G D Y LYA+V H+ + + GHY SY++ TW R++DS V V
Sbjct: 509 FVTGA--GDNPPLYFLYAVVVHVDTENASFSGHYISYVKDMQGTWLRIDDSEVQAVSLNQ 566
Query: 404 VLSQDAYILFYAK 416
V+S+ AY+LFY +
Sbjct: 567 VMSEGAYMLFYMR 579
>gi|409079510|gb|EKM79871.1| hypothetical protein AGABI1DRAFT_23476, partial [Agaricus bisporus
var. burnettii JB137-S8]
gi|426192538|gb|EKV42474.1| hypothetical protein AGABI2DRAFT_53097, partial [Agaricus bisporus
var. bisporus H97]
Length = 309
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 110/308 (35%), Positives = 165/308 (53%), Gaps = 13/308 (4%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL N GNTCF+N+ LQC HT PL++ + S + + + FC++CA R + +
Sbjct: 15 GLYNTGNTCFLNSALQCLLHTPPLLRQVFSHNKEK-----CKPFCMVCAFRQ-VTVQAHK 68
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDN 228
SP + L I+ +R +QED+HEFL+ +D ++ CL
Sbjct: 69 GSSPFSPSPVSGRLQTIAKHMRRGRQEDSHEFLRYAIDAMQKSCLAGFPPKAEAKLGEAT 128
Query: 229 IVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIEDPET 288
V ++FGG L S++ C NC SDT++ ++DLSL+I SL AL SF + ++ +
Sbjct: 129 WVHKIFGGRLRSRVSCQNCDHNSDTFDRILDLSLDIMRADSLKEALRSFISPDFLKGAD- 187
Query: 289 KFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPYTS 348
K+ CEKCK+ V+ EK+ + + PSV HLKRF G KI HV + L+L+PY S
Sbjct: 188 KYKCEKCKKHVNAEKRFTIHEAPSVLTVHLKRFSPLGR---KIGHHVIYDEHLNLQPYMS 244
Query: 349 GGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQD 408
GQ Y LY ++ H G P GHYF++++S W+ +ND + + V +
Sbjct: 245 KGQYG---FTYSLYGVICHAGGGPNSGHYFAFVKSRSGRWYEMNDEMASPISGPPVSKKT 301
Query: 409 AYILFYAK 416
AYILFY +
Sbjct: 302 AYILFYMR 309
>gi|50252264|dbj|BAD28270.1| putative ubiquitin-specific protease [Oryza sativa Japonica Group]
Length = 919
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 120/313 (38%), Positives = 177/313 (56%), Gaps = 13/313 (4%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL N GN+C+ NA+LQC T PL+ L H + C ++ +C++C L + +L
Sbjct: 386 GLFNCGNSCYANAVLQCLMCTKPLMIYLLLRLHSKDC--CSKNWCLMCELEQYAS-TLRE 442
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESL--SSQG 226
SG +SP +++ NL I QEDAHEFL+ L+ ++ CLD ++ + S Q
Sbjct: 443 SGGPVSPSRILSNLRNIGCRLGGGSQEDAHEFLRHLVMSMQGACLDGLGGEKQVEASLQE 502
Query: 227 DNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIED-VGSLGSALESFTKLEKIED 285
++Q++FGG L SK++C C S+ YE ++DL+LEI V SL AL FT E + D
Sbjct: 503 TTLIQQMFGGRLKSKVKCLRCYHESERYENIMDLTLEIHGWVESLQDALTQFTAPEDL-D 561
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E + C +C V KQL + +VP++ LKRF+T G Y KI+K V FP LD+ P
Sbjct: 562 GENMYKCGRCSAYVKARKQLSVHEVPNILTVVLKRFQT-GKYG-KINKCVTFPDMLDMVP 619
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGS--SPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
+ +G D Y LYA+V H+ + + GHY SY++ TW R++DS V V
Sbjct: 620 FVTGA--GDNPPLYFLYAVVVHVDTENASFSGHYISYVKDMQGTWLRIDDSEVQAVSLNQ 677
Query: 404 VLSQDAYILFYAK 416
V+S+ AY+LFY +
Sbjct: 678 VMSEGAYMLFYMR 690
>gi|18394440|ref|NP_564014.1| ubiquitin carboxyl-terminal hydrolase 15 [Arabidopsis thaliana]
gi|166201354|sp|Q9FPS9.2|UBP15_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 15; AltName:
Full=Deubiquitinating enzyme 15; Short=AtUBP15; AltName:
Full=Ubiquitin thioesterase 15; AltName:
Full=Ubiquitin-specific-processing protease 15
gi|332191421|gb|AEE29542.1| ubiquitin carboxyl-terminal hydrolase 15 [Arabidopsis thaliana]
Length = 924
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 115/313 (36%), Positives = 177/313 (56%), Gaps = 13/313 (4%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL N GN+C+ NA+LQ T T PLV L H R C G + +C++C L H+ + L
Sbjct: 439 GLVNCGNSCYANAVLQSLTCTKPLVAYLLRRSHSRSCSG--KDWCLMCELEQHV-MMLRE 495
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSS--QG 226
SG LS +++ ++ I+ QEDAHEFL+ L+ ++S CL+ + + Q
Sbjct: 496 SGGPLSASRILSHMRSINCQIGDGSQEDAHEFLRLLVASMQSICLERLGGETKVDPRLQE 555
Query: 227 DNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIED-VGSLGSALESFTKLEKIED 285
+VQ +FGG L SK++C C S+ YE ++DL+LEI V SL AL FT+ E + D
Sbjct: 556 TTLVQHMFGGRLRSKVKCLRCDHESERYENIMDLTLEIYGWVESLQDALTQFTRPEDL-D 614
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E + C +C V K+L + + P++ LKRF+ +G Y KI+K + FP LD+ P
Sbjct: 615 GENMYRCSRCAGYVRARKELSIHEAPNILTIVLKRFQ-EGRYG-KINKCISFPEMLDMIP 672
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGS--SPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
+ + + DV Y LYA++ H+ + + GHY SY++ W+R++DS + V
Sbjct: 673 FMT--RTGDVPPLYMLYAVIVHLDTLNASFSGHYISYVKDLRGNWYRIDDSEIHPVPMTQ 730
Query: 404 VLSQDAYILFYAK 416
V+S+ AY+LFY +
Sbjct: 731 VMSEGAYMLFYMR 743
>gi|388851883|emb|CCF54477.1| related to ubiquitin carboxyl-terminal hydrolase 36 [Ustilago
hordei]
Length = 749
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 111/343 (32%), Positives = 180/343 (52%), Gaps = 21/343 (6%)
Query: 85 GSSLLSRPVEKHWPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFD---- 140
G L + + +P +++ + GL N GNTC++N+++Q HT PL AL + D
Sbjct: 181 GGDLYPQKISLRFPGKVR--SIATGLSNYGNTCYMNSVMQSLIHTPPLAFALLTQDLETL 238
Query: 141 HPRPCDGATEGFCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEF 200
H F + A+++ + SL + +P++ NL + ++ +QEDAHE+
Sbjct: 239 HGEWGGKPNVNFDAVIAMQNFAKRSLQGTRPTNAPQEFNRNLKAFAKPLRQGRQEDAHEY 298
Query: 201 LQCLLDRLESCCLDSKTK----DESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEP 256
L+ LL+ L+ CL K D+ + + VQ++FGG L S++ C NC SDT++P
Sbjct: 299 LRFLLEALQQACLSRAPKSLKPDDPI--RRTTFVQKMFGGKLRSRVTCHNCSHNSDTFDP 356
Query: 257 LIDLSLEI-EDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAA 315
+DLSL++ + + SL A +F + + E K+ C+KCK +V KQ ++ P
Sbjct: 357 FMDLSLDVRKGINSLTDAFRAFVAKDHLTGSE-KYKCDKCKRKVDATKQFTIESCPPALT 415
Query: 316 FHLKRFKTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCG 375
HLKRF G KI + + F L++ PY S + ++Y LYA V H GS P G
Sbjct: 416 VHLKRFTAFGG---KISRQISFDESLNIAPYLSENRGP---VRYKLYAAVHHYGSGPNSG 469
Query: 376 HYFSYIRSSPDTWHRLNDSRVTRVEEEF-VLSQDAYILFYAKQ 417
HY + +++ W R++DS V+ + V Q AYILFY ++
Sbjct: 470 HYVASVKAPCGKWTRMDDSHVSEIGRGGPVNDQSAYILFYLRE 512
>gi|168013682|ref|XP_001759420.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689350|gb|EDQ75722.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 304
Score = 192 bits (488), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 109/309 (35%), Positives = 171/309 (55%), Gaps = 10/309 (3%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL+NLGNTC++N++LQC T+T PL S H C C C L I+ SL
Sbjct: 1 GLKNLGNTCYLNSVLQCLTYTPPLANFCMSNLHSILCTSPNNSNCPFCFLELRIQRSLTF 60
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLD-SKTKDESLSSQGD 227
G + +P K+ + L Y + F+ +QEDAHE L+ ++ C+ K + +
Sbjct: 61 EGPIDAPIKIHNRLQYFAKHFRNGRQEDAHELLRYAIEACNHVCVQLHKIVQVGSKEEPN 120
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIEDPE 287
+V+ +FGG L S+++C +C + S+ + ++DL+L+I + SL AL F + E + D E
Sbjct: 121 TVVKEIFGGLLQSQVKCLSCSTESNKLDEIMDLTLDIVRLSSLSEALCRFFQPE-VLDGE 179
Query: 288 TKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPYT 347
K+ C++CK+ KQ+ + + P+V +KRF + Y KID+HV F L L Y
Sbjct: 180 NKYRCDQCKKLSPARKQMSVYRAPNVLVIQMKRF--EDIYGGKIDRHVHFEERLCLAGYM 237
Query: 348 SGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQ 407
KY LY +V H GSS GHY+SY++ S W+ +D+RV++V + VL++
Sbjct: 238 CRAG------KYSLYGVVVHAGSSQDSGHYYSYVKESSGKWYCCDDARVSQVNAQTVLAE 291
Query: 408 DAYILFYAK 416
AY+LFY +
Sbjct: 292 KAYMLFYVR 300
>gi|164660262|ref|XP_001731254.1| hypothetical protein MGL_1437 [Malassezia globosa CBS 7966]
gi|159105154|gb|EDP44040.1| hypothetical protein MGL_1437 [Malassezia globosa CBS 7966]
Length = 574
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 115/343 (33%), Positives = 180/343 (52%), Gaps = 42/343 (12%)
Query: 107 GAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHP------------RPCDGATEGFCV 154
AGL N GNTC++N+++Q HT PL AL + P + A F
Sbjct: 125 AAGLHNRGNTCYMNSVMQSLLHTPPLATALLTQSAPTLLGRYGVPRTQKQAVKAANSFNA 184
Query: 155 ICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL- 213
+ ++D + S +SP V NL + + +QEDAHE+L+ LL+ L+ C
Sbjct: 185 LTEMKDFFAHAY-SGASAVSPTAFVSNLRKFARPLRPGRQEDAHEYLRLLLEALQQACTC 243
Query: 214 ----DSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEI-EDVG 268
D K D LS+ ++QR+FGG L S++ C +C SDTY+P++DLSL++ + +
Sbjct: 244 FAGKDIKPNDPILST---TLIQRIFGGRLRSRVTCYSCRHNSDTYDPMLDLSLDVRKGIH 300
Query: 269 SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYV 328
++ AL++FT E + D K+ C+ C+ +V K+ +D+ P V HLKRF G +
Sbjct: 301 TVKQALDAFTAAEALAD---KYQCDHCQRRVEATKRFSIDQAPMVLTVHLKRF---GIFG 354
Query: 329 VKIDKHVEFPLELDLKPYTS---GGQNSDVE-----------LKYHLYAIVEHMGSSPTC 374
KI+K + + L L Y S G +DVE +Y L+AIV H GS P
Sbjct: 355 NKINKPISYSDRLHLGRYMSERDKGLGADVEDEPDLGTLGAAQQYRLFAIVHHYGSGPNV 414
Query: 375 GHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQ 417
GHY + +RS+ W R++DS V+++ + + AY+LFY ++
Sbjct: 415 GHYVASVRSADGQWLRMDDSFVSKLPQCPLDDPSAYLLFYLRE 457
>gi|5734755|gb|AAD50020.1|AC007651_15 Unknown protein [Arabidopsis thaliana]
Length = 891
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 115/313 (36%), Positives = 177/313 (56%), Gaps = 13/313 (4%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL N GN+C+ NA+LQ T T PLV L H R C G + +C++C L H+ + L
Sbjct: 406 GLVNCGNSCYANAVLQSLTCTKPLVAYLLRRSHSRSCSG--KDWCLMCELEQHV-MMLRE 462
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSS--QG 226
SG LS +++ ++ I+ QEDAHEFL+ L+ ++S CL+ + + Q
Sbjct: 463 SGGPLSASRILSHMRSINCQIGDGSQEDAHEFLRLLVASMQSICLERLGGETKVDPRLQE 522
Query: 227 DNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIED-VGSLGSALESFTKLEKIED 285
+VQ +FGG L SK++C C S+ YE ++DL+LEI V SL AL FT+ E + D
Sbjct: 523 TTLVQHMFGGRLRSKVKCLRCDHESERYENIMDLTLEIYGWVESLQDALTQFTRPEDL-D 581
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E + C +C V K+L + + P++ LKRF+ +G Y KI+K + FP LD+ P
Sbjct: 582 GENMYRCSRCAGYVRARKELSIHEAPNILTIVLKRFQ-EGRYG-KINKCISFPEMLDMIP 639
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGS--SPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
+ + + DV Y LYA++ H+ + + GHY SY++ W+R++DS + V
Sbjct: 640 FMT--RTGDVPPLYMLYAVIVHLDTLNASFSGHYISYVKDLRGNWYRIDDSEIHPVPMTQ 697
Query: 404 VLSQDAYILFYAK 416
V+S+ AY+LFY +
Sbjct: 698 VMSEGAYMLFYMR 710
>gi|334182643|ref|NP_001185019.1| ubiquitin carboxyl-terminal hydrolase 15 [Arabidopsis thaliana]
gi|332191422|gb|AEE29543.1| ubiquitin carboxyl-terminal hydrolase 15 [Arabidopsis thaliana]
Length = 928
Score = 192 bits (487), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 115/313 (36%), Positives = 177/313 (56%), Gaps = 13/313 (4%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL N GN+C+ NA+LQ T T PLV L H R C G + +C++C L H+ + L
Sbjct: 443 GLVNCGNSCYANAVLQSLTCTKPLVAYLLRRSHSRSCSG--KDWCLMCELEQHV-MMLRE 499
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSS--QG 226
SG LS +++ ++ I+ QEDAHEFL+ L+ ++S CL+ + + Q
Sbjct: 500 SGGPLSASRILSHMRSINCQIGDGSQEDAHEFLRLLVASMQSICLERLGGETKVDPRLQE 559
Query: 227 DNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIED-VGSLGSALESFTKLEKIED 285
+VQ +FGG L SK++C C S+ YE ++DL+LEI V SL AL FT+ E + D
Sbjct: 560 TTLVQHMFGGRLRSKVKCLRCDHESERYENIMDLTLEIYGWVESLQDALTQFTRPEDL-D 618
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E + C +C V K+L + + P++ LKRF+ +G Y KI+K + FP LD+ P
Sbjct: 619 GENMYRCSRCAGYVRARKELSIHEAPNILTIVLKRFQ-EGRYG-KINKCISFPEMLDMIP 676
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGS--SPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
+ + + DV Y LYA++ H+ + + GHY SY++ W+R++DS + V
Sbjct: 677 FMT--RTGDVPPLYMLYAVIVHLDTLNASFSGHYISYVKDLRGNWYRIDDSEIHPVPMTQ 734
Query: 404 VLSQDAYILFYAK 416
V+S+ AY+LFY +
Sbjct: 735 VMSEGAYMLFYMR 747
>gi|18400378|ref|NP_566486.1| ubiquitin carboxyl-terminal hydrolase 25 [Arabidopsis thaliana]
gi|75262798|sp|Q9FPS2.1|UBP25_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 25; AltName:
Full=Deubiquitinating enzyme 25; Short=AtUBP25; AltName:
Full=Ubiquitin thioesterase 25; AltName:
Full=Ubiquitin-specific-processing protease 25
gi|11993490|gb|AAG42763.1|AF302673_1 ubiquitin-specific protease 25 [Arabidopsis thaliana]
gi|60543331|gb|AAX22263.1| At3g14400 [Arabidopsis thaliana]
gi|332641992|gb|AEE75513.1| ubiquitin carboxyl-terminal hydrolase 25 [Arabidopsis thaliana]
Length = 661
Score = 192 bits (487), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 117/344 (34%), Positives = 186/344 (54%), Gaps = 23/344 (6%)
Query: 81 RYNWGSSLLSRPVEKHWPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFD 140
+ +W SLLS Q + G GL NLGNTC++N++LQC T T PL +
Sbjct: 6 QMSWMPSLLS---------QKRRNGPPLGLRNLGNTCYLNSVLQCLTFTPPLANFCLTHK 56
Query: 141 HPRPCDGATEGF----CVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQED 196
H CD +G C C + I SL+ +P K+ L + F+ +QED
Sbjct: 57 HSSHCDTYVDGERKRDCPFCIVEKRIARSLSVDLTTDAPNKISSCLKIFAEHFKLGRQED 116
Query: 197 AHEFLQCLLDRLESCCLDSK----TKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSD 252
AHEFL+ ++D + L K +E + G+++V+ +FGG L S+++C +CG+ S+
Sbjct: 117 AHEFLRYVIDACHNTSLRLKKLRYNGNEPFN--GNSVVKEIFGGALQSQVKCLSCGAESN 174
Query: 253 TYEPLIDLSLEIEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPS 312
+ ++D+SLEI S+ +L+ F + E I D K+ CE C++ V+ KQ+ + + P+
Sbjct: 175 KADEIMDISLEILQSSSVKESLQKFFQSE-ILDGNNKYRCESCEKLVTARKQMSILQAPN 233
Query: 313 VAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSP 372
+ LKRF G + KIDK + F L L + S + D + +Y L+ I+ H G SP
Sbjct: 234 ILVIQLKRF--GGIFGGKIDKAISFGEILVLSNFMSKA-SKDPQPEYKLFGIIVHSGFSP 290
Query: 373 TCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAK 416
GHY++Y++ S W+ NDS V+ + VLS+ AYILF+++
Sbjct: 291 ESGHYYAYVKDSLGRWYCCNDSFVSLSTLQEVLSEKAYILFFSR 334
>gi|242064616|ref|XP_002453597.1| hypothetical protein SORBIDRAFT_04g008750 [Sorghum bicolor]
gi|241933428|gb|EES06573.1| hypothetical protein SORBIDRAFT_04g008750 [Sorghum bicolor]
Length = 966
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 119/313 (38%), Positives = 180/313 (57%), Gaps = 13/313 (4%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL N GN+C+ NA+LQC T PL+ L H + C +++ +C++C L + +L
Sbjct: 438 GLFNCGNSCYANAVLQCLMCTKPLMIYLLLRLHSKDC--SSKNWCLMCELEQYAS-TLRE 494
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESL--SSQG 226
SG LSP +++ NL I QEDAHEFL+ L+ +++ CLD ++ + S Q
Sbjct: 495 SGGPLSPSRILSNLRNIGCRLGGGTQEDAHEFLRHLVMSMQAACLDGLGGEKHVEPSLQE 554
Query: 227 DNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIED-VGSLGSALESFTKLEKIED 285
++Q++FGG L SK++C C S+ YE ++DL+LEI V SL AL FT E + D
Sbjct: 555 TTLIQQMFGGRLKSKVKCLRCYHESERYENIMDLTLEIHGWVESLQDALTQFTAPEDL-D 613
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
+ + C +C V KQL + +VP++ LKRF++ G Y KI+K V FP LD+ P
Sbjct: 614 GDNMYKCGRCSAYVKARKQLSVHEVPNILTLVLKRFQS-GKYG-KINKCVTFPDMLDMVP 671
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGS--SPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
+ +G + D Y LYA+V H+ + + GHY SY++ TW R++DS V V
Sbjct: 672 FVTG--SGDNPPLYFLYAVVVHVDTENASFSGHYISYVKDMQGTWLRIDDSEVQVVSVNQ 729
Query: 404 VLSQDAYILFYAK 416
V+S+ AY+LFY +
Sbjct: 730 VMSEGAYMLFYLR 742
>gi|356509862|ref|XP_003523663.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Glycine
max]
Length = 742
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 118/321 (36%), Positives = 177/321 (55%), Gaps = 15/321 (4%)
Query: 102 KPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDH 161
KP GL N GN+CF N +LQC + T PL+ L H R C +C +C H
Sbjct: 172 KPGFPPCGLLNCGNSCFANVVLQCLSFTRPLIAFLLEKGHHREC--CHNDWCFLCEFETH 229
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES 221
+E + S + SP ++ L IS +QEDAHEF++ +D ++S CLD ++
Sbjct: 230 VE-KVRLSSQAFSPMNILSRLPNISGTLGYGRQEDAHEFMRFSIDAMQSVCLDEFGGEKV 288
Query: 222 L--SSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE-DVGSLGSALESFT 278
+ +Q ++Q +FGG L S++ C C S+ YE ++DL++EI D SL L+ FT
Sbjct: 289 VPPRNQETTLIQHIFGGHLQSEVICTECEKNSNQYENMMDLTVEIHGDAASLEECLDQFT 348
Query: 279 KLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFP 338
E + + + C+ CK V K+L + + P++ LKRF++ G + K++K V FP
Sbjct: 349 AKEWLHG-DNMYKCDGCKGYVKAWKRLTVKQAPNILTIALKRFQS-GRFG-KLNKRVTFP 405
Query: 339 LELDLKPYTSG-GQNSDVELKYHLYAIVEH--MGSSPTCGHYFSYIRSSPDTWHRLNDSR 395
LDL PY S G SD+ Y LYA+V H M ++ GHY YI+ W+R++D +
Sbjct: 406 ETLDLSPYMSEVGDGSDI---YKLYAVVVHIDMLNASFFGHYICYIKDFCGNWYRIDDWK 462
Query: 396 VTRVEEEFVLSQDAYILFYAK 416
V+ VE E VLSQ AY+L Y++
Sbjct: 463 VSSVELEEVLSQGAYMLLYSR 483
>gi|449460062|ref|XP_004147765.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 25-like [Cucumis
sativus]
gi|449519156|ref|XP_004166601.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 25-like [Cucumis
sativus]
Length = 646
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 123/375 (32%), Positives = 192/375 (51%), Gaps = 24/375 (6%)
Query: 81 RYNWGSSLLSRPVEKHWPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFD 140
+ +W SLLS Q + G GL+NLGNTC++N++LQC T+T PL
Sbjct: 6 QMSWQPSLLS---------QKRRNGPPLGLKNLGNTCYLNSVLQCLTYTPPLANFCLRNQ 56
Query: 141 HPRPCDGATEGF-----CVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQE 195
H CD A+ C C L I SL+ + SP + L + F+ +QE
Sbjct: 57 HSSLCDFASSDADRKRECPFCILERRIVRSLSLDLTLDSPLNVQSCLRIFAEHFRLGRQE 116
Query: 196 DAHEFLQCLLDRLESCCLDSKTKDESLSSQG------DNIVQRVFGGCLISKLQCCNCGS 249
DAHEFL+ ++D + CL K + S G +V+ +FGG L S+++C +CG+
Sbjct: 117 DAHEFLRYVIDACHNTCLRLKKLRRNGSYNGGATTGSSTVVKEIFGGALQSQVKCLSCGN 176
Query: 250 CSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDK 309
S+ + ++D+SL++ SL AL+ F +LE I D K+ C+ CK+ V KQ+ + +
Sbjct: 177 DSNKVDEIMDISLDVLHSSSLKEALQKFFQLE-ILDGSNKYKCDNCKKLVVARKQMSILQ 235
Query: 310 VPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMG 369
P++ LKRF +G + KIDK + + L L + G + D +Y L+ + H G
Sbjct: 236 APNILVIQLKRF--EGIFGGKIDKAIAYEESLQLSNFMCKG-SQDSRPEYKLFGTIVHSG 292
Query: 370 SSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEWVSSLLEAE 429
S GHY++YI+ + W+ NDS VT + VLS+ YILF+++ V++
Sbjct: 293 FSAESGHYYAYIKDASGRWYCCNDSYVTVSTLQEVLSEKVYILFFSRTNQRPVTASTALA 352
Query: 430 SIGMNADISNSSPKS 444
S G+ + N S S
Sbjct: 353 SNGVKSHECNRSDGS 367
>gi|357489973|ref|XP_003615274.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
gi|355516609|gb|AES98232.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
Length = 1050
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 118/314 (37%), Positives = 181/314 (57%), Gaps = 15/314 (4%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL N GN+C+ NA+LQC T PL L H + C A++ +C C I L
Sbjct: 543 GLTNCGNSCYANAVLQCLVFTPPLTAYLLQGLHSKSC--ASKKWCFTCEFESLI-LKSKD 599
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLS-SQGD 227
+ LSP ++ L I S ++EDAHEFL+ +++ ++S CL D S + +
Sbjct: 600 TKFPLSPIGILSQLQSIGSQLGNGREEDAHEFLRHVVETMQSVCLMECGVDASDALKEQT 659
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE-DVGSLGSALESFTKLEKIEDP 286
N+V FGG L SK+QC CG S+ E ++DL++EIE ++ SL AL+ FT E + D
Sbjct: 660 NLVGLTFGGYLRSKIQCMKCGGKSERQERMMDLTVEIEGEITSLEEALKQFTSTETL-DG 718
Query: 287 ETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPY 346
E K+ C +CK +KQ+ + + P+V LKRF++ G + K++K + FP LDL P+
Sbjct: 719 ENKYHCGRCKSYEKAKKQMAVSEAPNVLTIALKRFRS-GKF-GKLNKSIRFPEILDLAPF 776
Query: 347 TSGGQNSDVELKYHLYAIVEHMGS--SPTCGHYFSYIRSSPDTWHRLNDS--RVTRVEEE 402
SG SD+ + Y LY +V H+ + + GHY Y+++ ++W +++DS RVT VE E
Sbjct: 777 MSG--TSDLAI-YRLYGVVVHLDTMNAAFSGHYVGYVKNFQNSWFKVDDSVVRVTPVELE 833
Query: 403 FVLSQDAYILFYAK 416
VL++ AY+L YA+
Sbjct: 834 TVLTKGAYMLLYAR 847
>gi|194376936|dbj|BAG63029.1| unnamed protein product [Homo sapiens]
Length = 1044
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 100/265 (37%), Positives = 159/265 (60%), Gaps = 10/265 (3%)
Query: 154 VICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL 213
++C ++ HI +L++ G V+ P +++ + I+ F+ QEDAHEFLQ +D ++ CL
Sbjct: 1 MMCTMQAHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL 60
Query: 214 DSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSA 273
+ K + +Q +V ++FGG L S+++C NC SDT++P +D++LEI+ S+ A
Sbjct: 61 NGSNKLDR-HTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKA 119
Query: 274 LESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK--TDGSYVVKI 331
LE F K E++ D E + C KCK+ V K+ + + +V LKRF T G KI
Sbjct: 120 LEQFVKPEQL-DGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG----KI 174
Query: 332 DKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRL 391
K V++P LD++PY S Q + + Y LYA++ H G + GHYF YI++S W+++
Sbjct: 175 AKDVKYPEYLDIRPYMS--QPNGEPIVYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQM 232
Query: 392 NDSRVTRVEEEFVLSQDAYILFYAK 416
NDS V+ + VLSQ AY+LFY +
Sbjct: 233 NDSIVSTSDIRSVLSQQAYVLFYIR 257
>gi|428166280|gb|EKX35258.1| hypothetical protein GUITHDRAFT_79938, partial [Guillardia theta
CCMP2712]
Length = 347
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 113/316 (35%), Positives = 172/316 (54%), Gaps = 7/316 (2%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEG-FCVICALRDHIEL 164
+G GL N+GNTCF NA+LQC T+T PL ++ +H + +G F + + HI
Sbjct: 35 IGPGLLNVGNTCFCNAVLQCLTYTPPLANLCKAQEHSKRITRDGQGKFDALKEVERHIIT 94
Query: 165 SLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSS 224
S + VL P +V++ I + + +QEDAHEF + L++ + L + ES S
Sbjct: 95 SSRCTQGVLKPSNIVNSFRKIGARLRLGRQEDAHEFTRLLMEAMHLADLAACRFTESPYS 154
Query: 225 QG--DNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEK 282
+ +V +FGG L S+++C C S+TY+ +DLSLEI+ ++ AL FTK E
Sbjct: 155 RAAQTGLVHGIFGGHLRSQVRCETCRYNSNTYDAFLDLSLEIKKADNITDALRLFTKPE- 213
Query: 283 IEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGS-YVVKIDKHVEFPLEL 341
I D K+ C C + K+ + + P V HLKRF+T S K+ KHV F L
Sbjct: 214 ILDGNNKYKCSHCGCKTRATKRFSVHRAPLVLQLHLKRFETSWSGNSCKLSKHVMFEQTL 273
Query: 342 DLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEE 401
L PY S G+ + +Y+LY +V H G S GHY++++++S W+ ++D V +V
Sbjct: 274 QLDPYMSEGEKAGS--RYNLYGVVVHSGHSMKSGHYYAFVKNSNGVWYEMDDDSVRQVSY 331
Query: 402 EFVLSQDAYILFYAKQ 417
V Q AY+LFY +Q
Sbjct: 332 SAVARQQAYMLFYVQQ 347
>gi|168040440|ref|XP_001772702.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675927|gb|EDQ62416.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 428
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 113/314 (35%), Positives = 181/314 (57%), Gaps = 14/314 (4%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL N GN+CF N +LQC T+T PL L + H C +C +C L+ H+ +
Sbjct: 123 GLVNCGNSCFANVVLQCLTYTRPLTAYLLNDSHREVCK--RNDWCFMCELQSHVR-KVRE 179
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESL--SSQG 226
+ SP +++ + I S +QEDAHEF++ +D ++S CLD ++++ ++Q
Sbjct: 180 TQNPFSPIRILSRIRSIGSHLGYGKQEDAHEFMRFAIDSMQSTCLDEFGGEKAVDPATQE 239
Query: 227 DNIVQRVFGGCLISKL-QCCNCGSCSDTYEPLIDLSLEIEDV-GSLGSALESFTKLEKIE 284
++ +FGG L S++ +C C S+ YE ++DL++EI V SL A+ FT E +
Sbjct: 240 TTLIHHIFGGHLQSQVVKCMECHHESNRYESMMDLAVEIHGVVESLEDAIAQFTAAEML- 298
Query: 285 DPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLK 344
D + K+ C++C V K+L + + P++ LKRF++ G + K++K V FP LD+
Sbjct: 299 DGDNKYKCDRCNAYVRAGKRLTVHEAPNILTIALKRFQS-GKFG-KLNKRVTFPKTLDMS 356
Query: 345 PYTSGGQNSDVELKYHLYAIVEHMG--SSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEE 402
PY SG N D L Y LYA+V H+ ++ GHY Y++ S W++++DS+V VE E
Sbjct: 357 PYMSG-TNDDSPL-YGLYAVVVHVDLLNASFFGHYICYVKDSNGVWYKIDDSKVKEVELE 414
Query: 403 FVLSQDAYILFYAK 416
VL+Q AY+LFY +
Sbjct: 415 KVLAQKAYMLFYTR 428
>gi|356510092|ref|XP_003523774.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like [Glycine
max]
Length = 1063
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 112/312 (35%), Positives = 179/312 (57%), Gaps = 12/312 (3%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL N GN+C+ NA+LQC T PL L H + C A + +C C I L
Sbjct: 604 GLINCGNSCYANAVLQCLAFTPPLTAYLLQGSHSKSC--ANKKWCFTCEFERLI-LKSKD 660
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDN 228
+ +SP ++ +L I S ++EDAHEFL+ ++D ++S CL + S + D
Sbjct: 661 TKSAVSPMGIISHLQNIGSQLANGREEDAHEFLRHVIDTMQSVCLMEAGVNALGSLEEDT 720
Query: 229 -IVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE-DVGSLGSALESFTKLEKIEDP 286
++ + FGG L+SK++C CG S+ E ++DL++EIE ++ +L AL FT E + D
Sbjct: 721 TLMGQTFGGYLLSKIKCMRCGGKSERQERMMDLTVEIEGEITTLVEALRRFTSTETL-DG 779
Query: 287 ETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPY 346
E K+ C +CK +K+L + + P+V LKRF++ G + K++K ++FP L+L P+
Sbjct: 780 ENKYHCVRCKSYEKAKKKLTVSEAPNVLTVALKRFQS-GKFG-KLNKPIQFPEILNLAPF 837
Query: 347 TSGGQNSDVELKYHLYAIVEHMG--SSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFV 404
SG SD Y LY +V H+ ++ GHY Y+++ + W +++DS VT VE + V
Sbjct: 838 MSG--TSDKSPIYRLYGVVVHLDIMNAAFSGHYVCYVKNIQNKWFKVDDSVVTAVELDRV 895
Query: 405 LSQDAYILFYAK 416
L++ AY+LFYA+
Sbjct: 896 LTKGAYMLFYAR 907
>gi|302781702|ref|XP_002972625.1| hypothetical protein SELMODRAFT_2140 [Selaginella moellendorffii]
gi|300160092|gb|EFJ26711.1| hypothetical protein SELMODRAFT_2140 [Selaginella moellendorffii]
Length = 303
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 113/309 (36%), Positives = 169/309 (54%), Gaps = 9/309 (2%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
G +NLGNTC++N++LQC T+T PL H + CDGA C C L + I S
Sbjct: 1 GFKNLGNTCYLNSVLQCLTYTPPLANYCLRGQHSKQCDGANSA-CPFCMLENRISRSFDI 59
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDN 228
V +P+++ L + F+ +QEDAHE L+ +D +S C ++ + S
Sbjct: 60 EVPVDAPQRIYKYLQTFAKHFRAGRQEDAHELLRYAIDACDSAC--ARLQKRGSKSSDQT 117
Query: 229 IVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIEDPET 288
+++ +FGG L S++ C +C + S + ++DLSL+I +L A+ +F + E + D
Sbjct: 118 VMKEIFGGFLQSQIWCLSCNAVSSKLDSVMDLSLDIVRTKTLKEAICNFFQPE-VLDGNN 176
Query: 289 KFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPYTS 348
K+ CEKCK+ KQL + + P+V LKRF + KID HVEF EL L+ + S
Sbjct: 177 KYQCEKCKKLSVARKQLSIYQSPNVLVIQLKRF--ENFLGGKIDAHVEFEEELKLRSHMS 234
Query: 349 GGQNS-DVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQ 407
+NS DV Y LYA+V H G S GHY++Y++ W+ NDS V+ VLS+
Sbjct: 235 --KNSPDVHPDYSLYAVVVHSGFSQYGGHYYAYVKDPRGQWYCCNDSFVSAASSATVLSE 292
Query: 408 DAYILFYAK 416
YILFY +
Sbjct: 293 RVYILFYVR 301
>gi|297834320|ref|XP_002885042.1| ubiquitin-specific protease 25 [Arabidopsis lyrata subsp. lyrata]
gi|297330882|gb|EFH61301.1| ubiquitin-specific protease 25 [Arabidopsis lyrata subsp. lyrata]
Length = 662
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 116/344 (33%), Positives = 185/344 (53%), Gaps = 23/344 (6%)
Query: 81 RYNWGSSLLSRPVEKHWPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFD 140
+ +W SLLS Q + G GL NLGNTC++N++LQC T T PL +
Sbjct: 6 QMSWMPSLLS---------QKRRNGPPLGLRNLGNTCYLNSVLQCLTFTPPLANFCLTHK 56
Query: 141 HPRPCDGATEGF----CVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQED 196
H CD +G C C + I SL+ +P K+ L + F+ +QED
Sbjct: 57 HSSHCDSYVDGERKRDCPFCIVEKRIARSLSVDLTTDAPNKISSCLKIFAEHFKLGRQED 116
Query: 197 AHEFLQCLLDRLESCCLDSKT----KDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSD 252
AHEFL+ ++D + L K +E + G+ +V+ +FGG L S+++C +CG+ S+
Sbjct: 117 AHEFLRYVIDACHNTSLRLKKLRIKGNEPFN--GNTVVKEIFGGALQSQVKCLSCGAESN 174
Query: 253 TYEPLIDLSLEIEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPS 312
+ ++D+SLEI S+ +++ F + E I D K+ CE C++ V+ KQ+ + + P+
Sbjct: 175 KADEIMDISLEILHSSSVKESMQKFFQSE-ILDGNNKYKCETCEKLVTARKQMSILQAPN 233
Query: 313 VAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSP 372
+ LKRF G + KIDK + F L L + S + D + +Y L+ I+ H G SP
Sbjct: 234 ILVIQLKRF--GGIFGGKIDKAISFGEILVLSNFMSKA-SKDPQPEYKLFGIIVHSGFSP 290
Query: 373 TCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAK 416
GHY++Y++ S W+ NDS V+ + VLS+ AYILF+++
Sbjct: 291 ESGHYYAYVKDSLGRWYCCNDSFVSLSTLQEVLSEKAYILFFSR 334
>gi|356518408|ref|XP_003527871.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like [Glycine
max]
Length = 1125
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 114/312 (36%), Positives = 179/312 (57%), Gaps = 12/312 (3%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL N GN+C+ NA+LQC T PL L H + C A + +C C I L
Sbjct: 601 GLVNCGNSCYANAVLQCLAFTPPLTAYLLQGLHLKSC--ANKKWCFTCEFERLI-LKSKD 657
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDN 228
+ +SP ++ +L I S ++EDAHEFL+ ++D ++S CL + S S + D
Sbjct: 658 TKSAVSPMGIISHLQNIGSQLGNGREEDAHEFLRHVIDTMQSVCLTEAGVNASGSLEEDT 717
Query: 229 -IVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE-DVGSLGSALESFTKLEKIEDP 286
++ + FGG L SK++C CG S+ E ++DL++EIE ++ +L AL FT E + D
Sbjct: 718 TLMGQTFGGYLRSKIKCMRCGGKSEHQERMMDLTVEIEGEITTLVEALRRFTSTETL-DG 776
Query: 287 ETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPY 346
E K+ C +CK +K+L + + P+V LKRF++ G + K++K ++FP L+L P+
Sbjct: 777 ENKYHCVRCKSYEKAKKKLTVSEAPNVLTVALKRFQS-GKFG-KLNKPIQFPEILNLAPF 834
Query: 347 TSGGQNSDVELKYHLYAIVEHMG--SSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFV 404
SG SD Y LY +V H+ ++ GHY Y+++ + W +++DS VT VE + V
Sbjct: 835 MSG--TSDKSPIYRLYGVVVHLDVMNASFSGHYVCYVKNIQNKWSKVDDSVVTAVELDRV 892
Query: 405 LSQDAYILFYAK 416
L++ AYILFYA+
Sbjct: 893 LTKGAYILFYAR 904
>gi|302780611|ref|XP_002972080.1| hypothetical protein SELMODRAFT_2133 [Selaginella moellendorffii]
gi|300160379|gb|EFJ26997.1| hypothetical protein SELMODRAFT_2133 [Selaginella moellendorffii]
Length = 303
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 113/309 (36%), Positives = 169/309 (54%), Gaps = 9/309 (2%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
G +NLGNTC++N++LQC T+T PL H + CDGA C C L + I S
Sbjct: 1 GFKNLGNTCYLNSVLQCLTYTPPLANYCLRGQHSKQCDGANSA-CPFCMLENRISRSFDI 59
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDN 228
V +P+++ L + F+ +QEDAHE L+ +D +S C ++ + S
Sbjct: 60 EVPVDAPQRIYKYLQTFAKHFRAGRQEDAHELLRYAIDACDSAC--ARLQKRGSKSSDQT 117
Query: 229 IVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIEDPET 288
+++ +FGG L S++ C +C + S + ++DLSL+I +L A+ +F + E + D
Sbjct: 118 VMKEIFGGFLQSQIWCLSCNAVSSKLDSVMDLSLDIVRTKTLKEAICNFFQPE-VLDGNN 176
Query: 289 KFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPYTS 348
K+ CEKCK+ KQL + + P+V LKRF + KID HVEF EL L+ + S
Sbjct: 177 KYQCEKCKKLSVARKQLSIYQSPNVLVIQLKRF--ENFLGGKIDTHVEFEEELKLRSHMS 234
Query: 349 GGQNS-DVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQ 407
+NS DV Y LYA+V H G S GHY++Y++ W+ NDS V+ VLS+
Sbjct: 235 --KNSPDVHPDYSLYAVVVHSGFSQYGGHYYAYVKDPRGQWYCCNDSFVSAASSATVLSE 292
Query: 408 DAYILFYAK 416
YILFY +
Sbjct: 293 RVYILFYVR 301
>gi|18086363|gb|AAL57643.1| AT3g14400/MLN21_18 [Arabidopsis thaliana]
Length = 661
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 115/342 (33%), Positives = 185/342 (54%), Gaps = 19/342 (5%)
Query: 81 RYNWGSSLLSRPVEKHWPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFD 140
+ +W SLLS Q + G GL NLGNTC++N++LQC T T PL +
Sbjct: 6 QMSWMPSLLS---------QKRRNGPPLGLRNLGNTCYLNSVLQCLTFTPPLANFCLTHK 56
Query: 141 HPRPCDGATEGF----CVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQED 196
H CD +G C C + I SL+ +P K+ L + F+ ++ED
Sbjct: 57 HSSHCDTYVDGERKRDCPFCIVEKRIARSLSVDLTTDAPNKISSCLKIFAEHFKLGREED 116
Query: 197 AHEFLQCLLDRLESCCLDSKT--KDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTY 254
AHEFL+ ++D + L K + + G+++V+ +FGG L S+++C +CG+ S+
Sbjct: 117 AHEFLRYVIDACHNTSLRLKKLRYNGNEPFNGNSVVKEIFGGALQSQVKCLSCGAESNKA 176
Query: 255 EPLIDLSLEIEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVA 314
+ ++D+SLEI S+ +L+ F + E I D K+ CE C++ V+ KQ+ + + P++
Sbjct: 177 DEIMDISLEILQSSSVKESLQKFFQSE-ILDGNNKYRCESCEKLVTARKQMSILQAPNIL 235
Query: 315 AFHLKRFKTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTC 374
LKRF G + KIDK + F L L + S + D + +Y L+ I+ H G SP
Sbjct: 236 VIQLKRF--GGIFGGKIDKAISFGEILVLSNFMSKA-SKDPQPEYKLFGIIVHSGFSPES 292
Query: 375 GHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAK 416
GHY++Y++ S W+ NDS V+ + VLS+ AYILF+++
Sbjct: 293 GHYYAYVKDSLGRWYCCNDSFVSLSTLQEVLSEKAYILFFSR 334
>gi|356518197|ref|XP_003527768.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Glycine
max]
Length = 734
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 116/321 (36%), Positives = 176/321 (54%), Gaps = 15/321 (4%)
Query: 102 KPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDH 161
KP GL+N GN+CF N +LQC + T PL+ L H C +C +C H
Sbjct: 164 KPGFPPCGLKNCGNSCFANVVLQCLSFTRPLIAFLLEKGHHGEC--CHSDWCFLCEFETH 221
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES 221
+E + S + SP ++ L IS +QEDAHEF++ +D ++S CLD ++
Sbjct: 222 VE-KVRLSSQAFSPMNILSRLPNISGTLGYGRQEDAHEFIRFAIDAMQSVCLDEFGGEKV 280
Query: 222 L--SSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE-DVGSLGSALESFT 278
+ Q ++Q +FGG L S++ C C S+ YE ++DL++EI D SL L+ FT
Sbjct: 281 VPPKHQETTLIQHIFGGHLQSEVICTECEKNSNQYENMMDLNVEIHGDAASLEECLDQFT 340
Query: 279 KLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFP 338
E + + + C+ CK V K+L + + P++ LKRF++ G + K++K V FP
Sbjct: 341 AKEWLHG-DNMYKCDGCKGYVKAWKRLTVKRAPNILTIALKRFQS-GRFG-KLNKRVTFP 397
Query: 339 LELDLKPYTS-GGQNSDVELKYHLYAIVEH--MGSSPTCGHYFSYIRSSPDTWHRLNDSR 395
LDL PY S G SD+ Y LYA+V H M ++ GHY +I+ W+R++D +
Sbjct: 398 ETLDLSPYMSEAGDGSDI---YKLYAVVVHIDMLNASFFGHYICFIKDLCGNWYRIDDWK 454
Query: 396 VTRVEEEFVLSQDAYILFYAK 416
V+ VE E VLSQ AY+L Y++
Sbjct: 455 VSSVELEEVLSQGAYMLLYSR 475
>gi|358421676|ref|XP_003585072.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42-like [Bos
taurus]
Length = 326
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 115/313 (36%), Positives = 176/313 (56%), Gaps = 25/313 (7%)
Query: 154 VICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL 213
++C ++ HI +L++ G V+ P +++ + I+ F+ QEDAHEFLQ +D ++ CL
Sbjct: 1 MMCTMQAHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL 60
Query: 214 DSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSA 273
+ K + +Q +V ++FGG L S+++C NC SDT++P +D++LEI+ S+ A
Sbjct: 61 NGSNKLDR-HTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKA 119
Query: 274 LESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK--TDGSYVVKI 331
LE F K E++ D E + C KCK+ V K+ + + +V LKRF T G KI
Sbjct: 120 LEQFVKPEQL-DGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG----KI 174
Query: 332 DKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRL 391
K V++P LD++PY S Q + + Y LYA++ H G + GHYF YI++S W+++
Sbjct: 175 AKDVKYPEYLDIRPYMS--QPNGEPIIYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQM 232
Query: 392 NDSRVTRVEEEFVLSQDAYILFY-----AKQGTEWVSSLLEAESIGMNADISNSSPKSVL 446
NDS V+ + VLSQ AY+LFY K G E S A S G SSP+ V+
Sbjct: 233 NDSIVSTSDIRSVLSQQAYVLFYIRSHDVKNGGELTHS---AHSPG------QSSPRPVI 283
Query: 447 DN-VENDYTSRSG 458
V N + SG
Sbjct: 284 SQRVVNSKQAASG 296
>gi|326510035|dbj|BAJ87234.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 979
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 119/313 (38%), Positives = 178/313 (56%), Gaps = 13/313 (4%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL N GN+C+ NA+LQC T PL+ L H + C ++ +C++C L + +L
Sbjct: 444 GLFNCGNSCYANAVLQCLMCTKPLMIHLLLRLHSKDC--CSKNWCLMCELEQYAS-TLRE 500
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESL--SSQG 226
SG +SP +++ NL I QEDAHEFL+ L+ +++ CLD ++ + S Q
Sbjct: 501 SGGPVSPSRILSNLRNIGCRLGGGSQEDAHEFLRHLVMSMQAACLDGLGGEKQVEQSLQE 560
Query: 227 DNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIED-VGSLGSALESFTKLEKIED 285
++Q++FGG L SK++C C S+ YE ++DL+LEI V SL AL FT E + D
Sbjct: 561 TTLIQQMFGGRLKSKVKCLRCHHESERYENIMDLTLEIHGWVESLQDALTQFTAPEDL-D 619
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
+ + C +C V KQL + +VP++ LKRF+T G Y KI+K V FP LD+ P
Sbjct: 620 GDNMYKCGRCCAYVKARKQLSVHEVPNILTVVLKRFQT-GKYG-KINKCVTFPDMLDMVP 677
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGS--SPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
+ +G D Y LYA+V H+ + + GHY SY++ TW R++DS V V
Sbjct: 678 FVTGA--GDHPPLYFLYAVVVHVDTENASFSGHYISYVKDMQGTWLRIDDSEVKAVSLNQ 735
Query: 404 VLSQDAYILFYAK 416
V+S+ AY+LFY +
Sbjct: 736 VMSEGAYMLFYLR 748
>gi|357140850|ref|XP_003571975.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15-like
[Brachypodium distachyon]
Length = 971
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 120/313 (38%), Positives = 177/313 (56%), Gaps = 14/313 (4%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL N GN+C+ NA+LQC T PL+ L H + C ++ C++C L + +L
Sbjct: 437 GLFNCGNSCYANAVLQCLMCTKPLMIYLLLRLHSKDC---SKNGCLMCELEQYAS-TLRE 492
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESL--SSQG 226
SG +SP +++ NL I QEDAHEFL+ L+ +++ CLD ++ + S Q
Sbjct: 493 SGGPVSPSRILSNLRNIGCRLGGGSQEDAHEFLRHLVMSMQAACLDGLGGEKHVEPSLQE 552
Query: 227 DNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIED-VGSLGSALESFTKLEKIED 285
++Q++FGG L SK++C C S+ YE ++DL+LEI V SL AL FT E + D
Sbjct: 553 TTLIQQMFGGRLKSKVKCLRCLHESERYENIMDLTLEIHGWVESLQDALTQFTAPEDL-D 611
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E + C +C V KQL + +VP++ LKRF+T G Y KI+K V FP LD+ P
Sbjct: 612 GENMYKCGRCCAYVKARKQLSVHEVPNILTVVLKRFQT-GKYG-KINKCVTFPEMLDMVP 669
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGS--SPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
+ +G D Y LYA+V H+ + + GHY SY++ TW R++DS V V
Sbjct: 670 FVTGA--GDHPPLYFLYAVVVHVDTENASFSGHYISYVKDMQGTWLRIDDSEVKAVSPNQ 727
Query: 404 VLSQDAYILFYAK 416
V+S+ AY+LFY +
Sbjct: 728 VMSEGAYMLFYLR 740
>gi|355728036|gb|AES09395.1| ubiquitin specific peptidase 36 [Mustela putorius furo]
Length = 270
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 102/266 (38%), Positives = 157/266 (59%), Gaps = 8/266 (3%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL NLGNTCF+N+ LQC T+T PL L S +H R C + FC++C +++H+ +
Sbjct: 10 VGAGLHNLGNTCFLNSTLQCLTYTPPLASYLLSKEHTRNCHQGS--FCMLCLMQNHMVQA 67
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
A+SG + P + +L I+ F+ QEDAHEFL+ ++D ++ CL+ K + +Q
Sbjct: 68 FANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYIVDAMQKACLNGCAKLDR-QTQ 126
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG L S+++C C S SDTY+P +D++LEI ++ ALE F K + +
Sbjct: 127 ATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIRQAANIVRALELFVKPD-VLS 185
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E + C KCK++V K+ + + +V LKRF KI K V +P L+++P
Sbjct: 186 GENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSG--GKITKDVGYPEFLNIRP 243
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSS 371
Y S Q+S + Y LYA++ H G S
Sbjct: 244 YMS--QSSGEPVMYGLYAVLVHSGYS 267
>gi|224056573|ref|XP_002298917.1| predicted protein [Populus trichocarpa]
gi|222846175|gb|EEE83722.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 189 bits (481), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 116/316 (36%), Positives = 177/316 (56%), Gaps = 13/316 (4%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL N GN+C+ NA+LQC T T PL+ L H R C G + +C++C L H+ + L
Sbjct: 352 GLVNCGNSCYANAVLQCLTCTKPLIIFLLRRSHSRACCG--KDWCLMCELEQHV-MMLRE 408
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSS--QG 226
G LSP +++ ++ I+ QEDAHEFL+ L+ ++S CL+ ++ + Q
Sbjct: 409 CGGPLSPSRILLHMRKINCQIGDGSQEDAHEFLRLLIASMQSICLERLGGEDKVDPRLQE 468
Query: 227 DNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIED-VGSLGSALESFTKLEKIED 285
+Q FGG L SK++C C S+ YE ++DL+LEI V SL AL FT E++ D
Sbjct: 469 TTFIQHTFGGLLRSKVKCLRCHHESERYENIMDLTLEIFGWVESLEDALTQFTTPEEL-D 527
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E + C +C V KQL + + P++ LKRF+ +G Y KI+K + FP LD+ P
Sbjct: 528 GENMYRCGRCAAYVRARKQLSIHEAPNILTIVLKRFQ-EGKY-GKINKCITFPDMLDMIP 585
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGS--SPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
+ +G DV Y LYA+V H+ + + GHY +Y++ +W +++D+ V V
Sbjct: 586 FMTG--MGDVPPLYMLYAVVVHLDTLNASFSGHYVAYVKDLRGSWFKIDDTEVHPVSMSQ 643
Query: 404 VLSQDAYILFYAKQGT 419
V+ + AYILFY + T
Sbjct: 644 VMLEGAYILFYKRSCT 659
>gi|357477637|ref|XP_003609104.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
gi|355510159|gb|AES91301.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
Length = 346
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 116/314 (36%), Positives = 169/314 (53%), Gaps = 29/314 (9%)
Query: 108 AGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLA 167
AG+ N+ N+CF+NAI Q F HT L L +F H RPC + GFC +CA +D +L+
Sbjct: 5 AGIRNMHNSCFMNAIFQAFIHTPHLYHGLGNFQH-RPC--SHNGFCFMCAFQDLFIEALS 61
Query: 168 SSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGD 227
S ++ P KL +NL S F + ED HEF+Q L L +
Sbjct: 62 PSRSIVIPSKLFENLKRFRSTFVKGHHEDPHEFMQSALYHLRK-----------YFPNFN 110
Query: 228 NIVQRVFGGCLISKLQC-CNCGSCSDTYEPLIDLSLEI---EDVGSLGSALESFTKLEKI 283
N++ ++FG ++KLQC C C + D + +LSL I + + ++ AL ++
Sbjct: 111 NLINQIFGVVFVNKLQCHCGCFA-DDKFGTEFELSLNITVPDRIENIQMALNNY-----F 164
Query: 284 EDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDL 343
E K C CK+ +K L+L + P VA HLKRF G+ KI K V F +ELDL
Sbjct: 165 EKVRVKRYCSFCKKYNFSDKWLLLTEPPLVAIIHLKRF---GNNEWKIAKPVSFSMELDL 221
Query: 344 KPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
KPY++G N V KY LYA+V H G GH+ Y+RS W+ ++D+ V + +E
Sbjct: 222 KPYSTGSDN--VSWKYDLYAMVHHKGDVIAEGHFVCYVRSDTGQWYLMDDAVVIKADEAE 279
Query: 404 VLSQDAYILFYAKQ 417
VLS++AY+LFY ++
Sbjct: 280 VLSKEAYLLFYLRK 293
>gi|302772254|ref|XP_002969545.1| hypothetical protein SELMODRAFT_91996 [Selaginella moellendorffii]
gi|300163021|gb|EFJ29633.1| hypothetical protein SELMODRAFT_91996 [Selaginella moellendorffii]
Length = 374
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 110/298 (36%), Positives = 169/298 (56%), Gaps = 13/298 (4%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
V GL N GN+C+ N +LQC T PL L H C+ EG+C +C L DH++ +
Sbjct: 81 VPCGLINCGNSCYANVVLQCLASTRPLAAYLLHGMHQEACE--REGWCFMCELEDHVQKA 138
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSS- 224
++ SP K++ L I + +QEDAHEF++ +D ++ CLD + +L +
Sbjct: 139 F-NNQMPFSPIKILSRLRSIGNSLGYGRQEDAHEFMRLAVDCMQKICLDEAGGETTLDAR 197
Query: 225 -QGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE-DVGSLGSALESFTKLEK 282
Q ++Q +FGG L S++ CC C S+ YE ++DLS+ I+ +V SL AL+ FT E
Sbjct: 198 TQETTLIQHIFGGYLQSQVVCCQCQQRSNLYENMLDLSVGIQGNVESLEDALKQFTSPEW 257
Query: 283 IEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELD 342
+ D + K+ C++C V +K+L + + P++ LKRF+ G KI+K V FP ELD
Sbjct: 258 L-DGDNKYRCDRCNAYVRAKKRLSVHEAPNILTIALKRFQ--GGKFGKINKKVTFPEELD 314
Query: 343 LKPYTSGGQNSDVELKYHLYAIVEH--MGSSPTCGHYFSYIRSSPDTWHRLNDSRVTR 398
+ PY SG D Y LYA+V H M ++ GHY Y+R+ W +++DS+V+R
Sbjct: 315 MVPYMSG--TVDTPPAYELYAVVVHVDMLNASYFGHYVCYVRAGNGAWFKVDDSKVSR 370
>gi|224121556|ref|XP_002330730.1| predicted protein [Populus trichocarpa]
gi|222872506|gb|EEF09637.1| predicted protein [Populus trichocarpa]
Length = 621
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 117/348 (33%), Positives = 191/348 (54%), Gaps = 20/348 (5%)
Query: 83 NWGSSLLSRPVEKHWPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHP 142
+W +LLS+ K+ P+ GL+NLGN+C++N++LQC T+T PL H
Sbjct: 2 SWQPNLLSQQ-RKNGPL---------GLKNLGNSCYLNSVLQCLTYTPPLANFCLRLQHS 51
Query: 143 RPCDGATEGF----CVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAH 198
C+ G C C L I SL+S P K+ L + F+ +QEDAH
Sbjct: 52 SLCNSLASGDRKRDCPFCILEKQIVRSLSSDLAHDVPSKIRSCLKIFAEHFRCGRQEDAH 111
Query: 199 EFLQCLLDRLESCCLD-SKTKDESLSSQGD-NIVQRVFGGCLISKLQCCNCGSCSDTYEP 256
EFL+ ++D + CL K + + + GD ++V+++FGG L S+++C C S+ +
Sbjct: 112 EFLRYVIDACHNTCLRLKKLSWKGIENGGDGSVVKKIFGGALQSQVKCLCCNCESNKVDE 171
Query: 257 LIDLSLEIEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAF 316
++D+SL++ + S+ A++ F + E + D K+ CE CK+ V+ KQ+ + + P+V
Sbjct: 172 IMDISLDVLNSNSVRDAMQKFFQPE-VLDGNNKYKCENCKKLVAARKQMSVLQAPNVLVI 230
Query: 317 HLKRFKTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGH 376
LKRF +G + KIDK + F L L + S + D + KY+L+ I+ H G S GH
Sbjct: 231 QLKRF--EGIFGGKIDKAIAFEEVLVLSSFMSK-TSQDPQPKYNLFGIIVHSGYSLEAGH 287
Query: 377 YFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEWVSS 424
Y++YI+ + W+ NDS VT + V+S+ AYILF+++ VS+
Sbjct: 288 YYAYIKDAIGQWYCCNDSYVTLSTLQEVMSEKAYILFFSRTNQRPVSA 335
>gi|242081757|ref|XP_002445647.1| hypothetical protein SORBIDRAFT_07g023330 [Sorghum bicolor]
gi|241941997|gb|EES15142.1| hypothetical protein SORBIDRAFT_07g023330 [Sorghum bicolor]
Length = 998
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 113/324 (34%), Positives = 183/324 (56%), Gaps = 11/324 (3%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL N+GN+C+ NA+LQC T PL L H + C + +G+C +C I +
Sbjct: 466 GLHNVGNSCYANAVLQCLMFTRPLTTYLLEGLHSKNC--SQKGWCFMCEFEKLI-VEGKR 522
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDN 228
LSP ++ +L+ I S +QEDAHEFL+ +D ++S C+ +K + S +
Sbjct: 523 RKTALSPTGILSHLHDIGSSLGPGKQEDAHEFLRYAIDAMQSVCMKEASKGGVIQSMEET 582
Query: 229 -IVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE-DVGSLGSALESFTKLEKIEDP 286
+VQ +FGG L SK++C C S+ EP++DL++EI+ D+ SL ALE FT E + D
Sbjct: 583 TLVQLIFGGYLRSKIKCSRCHVSSEQCEPMLDLTVEIDGDISSLDEALERFTSTE-VLDG 641
Query: 287 ETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPY 346
E K+ C +CK +K+L +++ P+V LKR+++ G + KI K + FP L++ Y
Sbjct: 642 ENKYHCSRCKSYERAKKKLTIEEAPNVLTIALKRYQS-GKF-GKISKAIRFPDTLNMGHY 699
Query: 347 TSGGQNSDVELKYHLYAIVEH--MGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFV 404
+ + D+ Y LYA+V H + ++ GHY Y++ + W + +DS+V V + V
Sbjct: 700 MNPDTD-DISPVYSLYAVVVHHDVMNAAFSGHYVCYVKDTQGKWFKADDSQVKPVSLDNV 758
Query: 405 LSQDAYILFYAKQGTEWVSSLLEA 428
+S+ AY+L YA+ SS+ +A
Sbjct: 759 MSKCAYMLLYARCSPRAPSSVRQA 782
>gi|340508861|gb|EGR34476.1| hypothetical protein IMG5_010250 [Ichthyophthirius multifiliis]
Length = 347
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 107/313 (34%), Positives = 176/313 (56%), Gaps = 18/313 (5%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
+G GL NLGNTCF+N++LQC THT LV L S H C C+IC ++ H++
Sbjct: 23 IGPGLRNLGNTCFMNSVLQCITHTPLLVNYLLSNLHA--CQKKQ---CIICVVQKHVKQC 77
Query: 166 LAS-SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSS 224
++ S +++P ++++N+ YI+ F+ +Q D+HEFL+ LL+ ++ K + L
Sbjct: 78 FSNNSNNIIAPSEIINNMKYINKNFRLGKQHDSHEFLRFLLEAMQKSYFIDIKKQKILEE 137
Query: 225 QGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIE 284
Q + +FGG LIS++QC +C S E DL LE + ++ + ESF K E I
Sbjct: 138 QTP--IFNIFGGKLISQIQCFSCKQISQNIETFYDLLLECKQ--NIDQSFESFFKKE-IL 192
Query: 285 DPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLK 344
K+ C CK V K ++ K P++ LKRF ++++K++KH +F ++LK
Sbjct: 193 SGNNKYRCSFCKNLVDCSKGYVIQKFPNILTIQLKRF---NNFMMKVNKHTQFAPTINLK 249
Query: 345 PYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFV 404
Y++ ++ Y LY I+ H+G GHY+ Y +S W+ +NDS V +V + V
Sbjct: 250 KYSTNQKDQI----YDLYGILIHVGHDLNYGHYYCYTKSPNKQWYCMNDSSVNQVSFQEV 305
Query: 405 LSQDAYILFYAKQ 417
++ A++LFY+K+
Sbjct: 306 QNEKAFLLFYSKR 318
>gi|147776521|emb|CAN74012.1| hypothetical protein VITISV_003549 [Vitis vinifera]
Length = 1225
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 113/322 (35%), Positives = 178/322 (55%), Gaps = 16/322 (4%)
Query: 99 IQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICAL 158
++++P GL N GN+C+ NA+LQC T PL H + C + +C C
Sbjct: 656 VELRP----CGLMNCGNSCYANAVLQCLAFTPPLTSYFLQGLHSKSC--LKKEWCFTCEF 709
Query: 159 RDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTK 218
I L LSP ++ + I S ++EDAHEFL+ +D ++S CL
Sbjct: 710 ESLI-LKAKEGNSPLSPLGILSQIRNIGSHLGNGKEEDAHEFLRYAIDAMQSVCLKEAGV 768
Query: 219 DESLSSQGD-NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE-DVGSLGSALES 276
+ S S + + +++ FGG L SK++C C S+ +E ++DL++EIE D+G+L AL
Sbjct: 769 NASGSLEEETSLIGLTFGGYLRSKIKCMKCHGKSERHERMMDLTVEIEGDIGTLEEALHK 828
Query: 277 FTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVE 336
FT E I D E K+ C +CK +K+L + + P++ LKRF++ G + K++K +
Sbjct: 829 FTSTE-ILDGENKYQCSRCKSYEKAKKKLTVSEAPNILTIALKRFQS-GKFG-KLNKSIR 885
Query: 337 FPLELDLKPYTSGGQNSDVELKYHLYAIVEHMG--SSPTCGHYFSYIRSSPDTWHRLNDS 394
FP LDL P+ SG SD Y LYA+V H+ ++ GHY Y+++ + W +++DS
Sbjct: 886 FPEILDLAPFMSG--TSDKSPIYRLYAVVVHLDIMNAAFSGHYVCYVKNIQNKWFKIDDS 943
Query: 395 RVTRVEEEFVLSQDAYILFYAK 416
V VE E VL++ AY+L YA+
Sbjct: 944 TVKPVELERVLTKGAYMLLYAR 965
>gi|225459111|ref|XP_002283885.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like [Vitis
vinifera]
Length = 1213
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 113/322 (35%), Positives = 178/322 (55%), Gaps = 16/322 (4%)
Query: 99 IQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICAL 158
++++P GL N GN+C+ NA+LQC T PL H + C + +C C
Sbjct: 644 VELRP----CGLMNCGNSCYANAVLQCLAFTPPLTSYFLQGLHSKSC--LKKEWCFTCEF 697
Query: 159 RDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTK 218
I L LSP ++ + I S ++EDAHEFL+ +D ++S CL
Sbjct: 698 ESLI-LKAKEGNSPLSPLGILSQIRNIGSHLGNGKEEDAHEFLRYAIDAMQSVCLKEAGV 756
Query: 219 DESLSSQGD-NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE-DVGSLGSALES 276
+ S S + + +++ FGG L SK++C C S+ +E ++DL++EIE D+G+L AL
Sbjct: 757 NASGSLEEETSLIGLTFGGYLRSKIKCMKCHGKSERHERMMDLTVEIEGDIGTLEEALHK 816
Query: 277 FTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVE 336
FT E I D E K+ C +CK +K+L + + P++ LKRF++ G + K++K +
Sbjct: 817 FTSTE-ILDGENKYQCSRCKSYEKAKKKLTVSEAPNILTIALKRFQS-GKFG-KLNKSIR 873
Query: 337 FPLELDLKPYTSGGQNSDVELKYHLYAIVEHMG--SSPTCGHYFSYIRSSPDTWHRLNDS 394
FP LDL P+ SG SD Y LYA+V H+ ++ GHY Y+++ + W +++DS
Sbjct: 874 FPEILDLAPFMSG--TSDKSPIYRLYAVVVHLDIMNAAFSGHYVCYVKNIQNKWFKIDDS 931
Query: 395 RVTRVEEEFVLSQDAYILFYAK 416
V VE E VL++ AY+L YA+
Sbjct: 932 TVKPVELERVLTKGAYMLLYAR 953
>gi|224116680|ref|XP_002317364.1| predicted protein [Populus trichocarpa]
gi|222860429|gb|EEE97976.1| predicted protein [Populus trichocarpa]
Length = 777
Score = 188 bits (478), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 122/342 (35%), Positives = 186/342 (54%), Gaps = 14/342 (4%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL N GN+C+ NA+LQC T T PL+ L H R C +C++C L H+ + L
Sbjct: 382 GLVNCGNSCYANAVLQCLTCTKPLIVFLLHRSHSRAC--CEIDWCLMCELEQHV-MMLRE 438
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSS--QG 226
G LSP +++ ++ I+ QEDAHEFL+ L+ ++S CL+ ++ + Q
Sbjct: 439 CGGPLSPSRILLHMRNINHQIGDGSQEDAHEFLRLLIASMQSICLEKLGGEDKVDPRLQE 498
Query: 227 DNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIED-VGSLGSALESFTKLEKIED 285
+Q FGG L SK++C C S+ YE ++DL+LEI V SL AL FT E++ D
Sbjct: 499 TTFIQHTFGGRLRSKVKCLRCHHESERYENIMDLTLEIFGWVKSLEDALTQFTTPEEL-D 557
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E + C +C V KQL + + P++ LKRF+ +G Y KI+K + FP LD+ P
Sbjct: 558 GENMYRCGRCAAYVRARKQLSIHEAPNILTIVLKRFQ-EGKY-GKINKCITFPDMLDMIP 615
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGS--SPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
+ +G DV Y LYA+V H+ + + GHY +Y++ +W R++D+ V V
Sbjct: 616 FMTG--TGDVPPLYMLYAVVVHLDTLNASFSGHYVAYVKDLQGSWFRIDDTEVHPVSMSQ 673
Query: 404 VLSQDAYILFYAKQGTEWVSSL-LEAESIGMNADISNSSPKS 444
V+ + AYILFY +SL ++ E+ A +N P+S
Sbjct: 674 VMLEGAYILFYTSHFVGPEASLDVKPENGSSLASYANGIPRS 715
>gi|359495665|ref|XP_003635052.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Vitis
vinifera]
Length = 942
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 115/312 (36%), Positives = 172/312 (55%), Gaps = 12/312 (3%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL N GN+C+ NA+LQC T T PL L H + C E +C IC I L
Sbjct: 398 GLMNCGNSCYANAVLQCLTFTRPLASYLLQGLHSKAC--PKEDWCFICEFECLI-LEARE 454
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDN 228
LSP ++ + I S ++EDAHEFL+ +D ++S CL L+ +
Sbjct: 455 GKSPLSPMGILSQIQRIGSHLGHGREEDAHEFLRYAVDTMQSVCLKDTGVVGPLA-EDTT 513
Query: 229 IVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE-DVGSLGSALESFTKLEKIEDPE 287
+V FGG L+SK++C C S+ E ++DL++EI+ D+G+L AL FT E I D E
Sbjct: 514 LVGLTFGGYLLSKIKCMKCQGKSERCERMMDLTVEIDGDIGTLEEALAQFTATE-ILDGE 572
Query: 288 TKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPYT 347
K+ C +C+ +K+LM+ + P++ LKRF++ S K++K V FP L+L PY
Sbjct: 573 NKYQCGRCRSYEKAKKKLMVLEAPNILTIVLKRFQS--SNFGKLNKSVRFPETLNLTPYM 630
Query: 348 SGGQNSDVELKYHLYAIVEHMG--SSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
SG D Y LYA+V H+ ++ GHY ++++ W R++DS VT VE + VL
Sbjct: 631 SG--TDDRYPVYSLYAVVVHLDIMNAAFSGHYVCFVKNFLGDWFRIDDSTVTPVELDRVL 688
Query: 406 SQDAYILFYAKQ 417
+ AY+L YA++
Sbjct: 689 LEGAYMLLYARR 700
>gi|302142049|emb|CBI19252.3| unnamed protein product [Vitis vinifera]
Length = 841
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 113/322 (35%), Positives = 178/322 (55%), Gaps = 16/322 (4%)
Query: 99 IQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICAL 158
++++P GL N GN+C+ NA+LQC T PL H + C + +C C
Sbjct: 466 VELRP----CGLMNCGNSCYANAVLQCLAFTPPLTSYFLQGLHSKSC--LKKEWCFTCEF 519
Query: 159 RDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTK 218
I L LSP ++ + I S ++EDAHEFL+ +D ++S CL
Sbjct: 520 ESLI-LKAKEGNSPLSPLGILSQIRNIGSHLGNGKEEDAHEFLRYAIDAMQSVCLKEAGV 578
Query: 219 DESLSSQGD-NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE-DVGSLGSALES 276
+ S S + + +++ FGG L SK++C C S+ +E ++DL++EIE D+G+L AL
Sbjct: 579 NASGSLEEETSLIGLTFGGYLRSKIKCMKCHGKSERHERMMDLTVEIEGDIGTLEEALHK 638
Query: 277 FTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVE 336
FT E I D E K+ C +CK +K+L + + P++ LKRF++ G + K++K +
Sbjct: 639 FTSTE-ILDGENKYQCSRCKSYEKAKKKLTVSEAPNILTIALKRFQS-GKFG-KLNKSIR 695
Query: 337 FPLELDLKPYTSGGQNSDVELKYHLYAIVEHMG--SSPTCGHYFSYIRSSPDTWHRLNDS 394
FP LDL P+ SG SD Y LYA+V H+ ++ GHY Y+++ + W +++DS
Sbjct: 696 FPEILDLAPFMSG--TSDKSPIYRLYAVVVHLDIMNAAFSGHYVCYVKNIQNKWFKIDDS 753
Query: 395 RVTRVEEEFVLSQDAYILFYAK 416
V VE E VL++ AY+L YA+
Sbjct: 754 TVKPVELERVLTKGAYMLLYAR 775
>gi|297794145|ref|XP_002864957.1| hypothetical protein ARALYDRAFT_332761 [Arabidopsis lyrata subsp.
lyrata]
gi|297310792|gb|EFH41216.1| hypothetical protein ARALYDRAFT_332761 [Arabidopsis lyrata subsp.
lyrata]
Length = 731
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 113/318 (35%), Positives = 175/318 (55%), Gaps = 11/318 (3%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGN+C+ N++LQC T PL+ L H + C + +C +C +H+ L
Sbjct: 330 GLVNLGNSCYANSVLQCLAFTRPLMSYLIRGLHSKTC--RKKSWCFVCEF-EHLILKARG 386
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDN 228
LSP K++ L I ++EDAHEFL+C ++ ++S L + + +
Sbjct: 387 GESPLSPIKILSKLQKIGKHLGPGKEEDAHEFLRCAVETMQSVFLKEASAAGPFAEE-TT 445
Query: 229 IVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE-DVGSLGSALESFTKLEKIEDPE 287
+V FGG L SK++C C S+ E ++DL++EI+ D+GSL AL FT E + D E
Sbjct: 446 LVGLTFGGYLHSKIKCMKCLHKSEQSELMMDLTVEIDGDIGSLEEALAQFTAYE-VLDGE 504
Query: 288 TKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPYT 347
++ C +CK +K+LM+ + P++ LKRF++D K+ K + FP LD+ PY
Sbjct: 505 NRYFCGRCKSYQKAKKKLMILEGPNILTVVLKRFQSDN--FGKLSKPIHFPELLDIGPYM 562
Query: 348 SGGQNSDVELKYHLYAIVEHMGSSPTC--GHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
S + D + Y LYA+V H+ + T GHY YI++ W +++DS V RV+ E VL
Sbjct: 563 SDPNHGDHPV-YSLYAVVVHLDAMSTSFSGHYVCYIKTLHGDWFKIDDSNVFRVQLETVL 621
Query: 406 SQDAYILFYAKQGTEWVS 423
+ AY+L YA+ VS
Sbjct: 622 LEGAYMLLYARNSPRPVS 639
>gi|115476910|ref|NP_001062051.1| Os08g0478500 [Oryza sativa Japonica Group]
gi|42407867|dbj|BAD09009.1| putative ubiquitin-specific protease [Oryza sativa Japonica Group]
gi|113624020|dbj|BAF23965.1| Os08g0478500 [Oryza sativa Japonica Group]
Length = 978
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 111/313 (35%), Positives = 179/313 (57%), Gaps = 13/313 (4%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGN+C+ NA+LQC T PL L H + C + + +C +C +
Sbjct: 451 GLHNLGNSCYANAVLQCLMFTRPLTSYLLGGLHSKNC--SKKEWCFMCEFEKLV--GEGR 506
Query: 169 SGKV-LSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLS-SQG 226
GK+ LSP ++ +L I S F +QEDAHEFL+ +D ++S C+ K + +
Sbjct: 507 QGKIALSPTGILSHLPDIGSSFGPGKQEDAHEFLRYAIDAMQSVCMKEARKSGTHRLHEE 566
Query: 227 DNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE-DVGSLGSALESFTKLEKIED 285
++Q +FGG L SK++C C + S+ +E ++DL++EI+ D+ SL ALE FT E + D
Sbjct: 567 TTLMQLIFGGYLRSKIRCTRCDATSEQHERILDLTVEIDGDISSLEGALERFTSTE-VLD 625
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
+ K+ C +CK +K+L + + P+V LKR+++ G + KI+K + FP L+L+
Sbjct: 626 GDNKYKCSRCKSHERAKKKLTISEAPNVLTIALKRYQS-GKF-GKINKAIRFPETLNLQR 683
Query: 346 YTSGGQNSDVELKYHLYAIVEH--MGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
Y S + D Y LYA+V H + ++ GHY Y++ + W++ +DS+V V E
Sbjct: 684 YMS-PKADDTSPVYSLYAVVVHHDIMNAAFSGHYVCYVKDTHGKWYKTDDSQVKPVSLEN 742
Query: 404 VLSQDAYILFYAK 416
V+S+ AY+L YA+
Sbjct: 743 VMSKCAYMLLYAR 755
>gi|224114846|ref|XP_002316872.1| predicted protein [Populus trichocarpa]
gi|222859937|gb|EEE97484.1| predicted protein [Populus trichocarpa]
Length = 657
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 114/344 (33%), Positives = 185/344 (53%), Gaps = 21/344 (6%)
Query: 81 RYNWGSSLLSRPVEKHWPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFD 140
+ +W SLLS Q + G GL+NLGN+C++N++LQC T+T PL
Sbjct: 10 QMSWQPSLLS---------QKRKNGPPLGLKNLGNSCYLNSVLQCLTYTPPLANFCLRLQ 60
Query: 141 HPRPCDGATEGF----CVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQED 196
H CD G C C L I SL+ + +P K+ L + F+ +QED
Sbjct: 61 HSSLCDSVANGDRKRDCPFCILEKRIVRSLSLDLTLDAPAKIQSCLKIFAEHFRCGRQED 120
Query: 197 AHEFLQCLLDRLESCCLDSKT----KDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSD 252
AHEFL+ ++D + CL K E+ G ++V+ +FGG L S+++C C S+
Sbjct: 121 AHEFLRYVIDACHNTCLRLKKLRRKGIENGGGGGVSVVKEIFGGALQSQVKCLCCNYESN 180
Query: 253 TYEPLIDLSLEIEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPS 312
+ ++D+SL++ + S+ A++ F + E + D K+ CEKC++ V+ KQ+ + + P+
Sbjct: 181 KVDEIMDISLDVLNSYSVRDAMQKFFQPE-VLDGNNKYKCEKCQKLVAARKQMSILQAPN 239
Query: 313 VAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSP 372
V LKRF +G + KIDK + F L L + S + D + +Y+L+ + H G SP
Sbjct: 240 VLVIQLKRF--EGIFGAKIDKAIAFEEVLVLSSFMSK-TSQDPQPEYNLFGTIVHSGYSP 296
Query: 373 TCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAK 416
GHY++YI+ + W+ NDS VT + VLS+ Y+LF+++
Sbjct: 297 ESGHYYAYIKDAMGRWYCCNDSYVTLSTLQEVLSEKVYVLFFSR 340
>gi|222640740|gb|EEE68872.1| hypothetical protein OsJ_27681 [Oryza sativa Japonica Group]
Length = 897
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 111/313 (35%), Positives = 179/313 (57%), Gaps = 13/313 (4%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGN+C+ NA+LQC T PL L H + C + + +C +C +
Sbjct: 370 GLHNLGNSCYANAVLQCLMFTRPLTSYLLGGLHSKNC--SKKEWCFMCEFEKLV--GEGR 425
Query: 169 SGKV-LSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLS-SQG 226
GK+ LSP ++ +L I S F +QEDAHEFL+ +D ++S C+ K + +
Sbjct: 426 QGKIALSPTGILSHLPDIGSSFGPGKQEDAHEFLRYAIDAMQSVCMKEARKSGTHRLHEE 485
Query: 227 DNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE-DVGSLGSALESFTKLEKIED 285
++Q +FGG L SK++C C + S+ +E ++DL++EI+ D+ SL ALE FT E + D
Sbjct: 486 TTLMQLIFGGYLRSKIRCTRCDATSEQHERILDLTVEIDGDISSLEGALERFTSTE-VLD 544
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
+ K+ C +CK +K+L + + P+V LKR+++ G + KI+K + FP L+L+
Sbjct: 545 GDNKYKCSRCKSHERAKKKLTISEAPNVLTIALKRYQS-GKF-GKINKAIRFPETLNLQR 602
Query: 346 YTSGGQNSDVELKYHLYAIVEH--MGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
Y S + D Y LYA+V H + ++ GHY Y++ + W++ +DS+V V E
Sbjct: 603 YMS-PKADDTSPVYSLYAVVVHHDIMNAAFSGHYVCYVKDTHGKWYKTDDSQVKPVSLEN 661
Query: 404 VLSQDAYILFYAK 416
V+S+ AY+L YA+
Sbjct: 662 VMSKCAYMLLYAR 674
>gi|356551761|ref|XP_003544242.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like [Glycine
max]
Length = 1045
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 113/312 (36%), Positives = 177/312 (56%), Gaps = 13/312 (4%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL N GN+C+ NA+LQC T PL L H + C A + +C C I L
Sbjct: 508 GLINCGNSCYANAVLQCLAFTPPLTAYLLQGLHSKSC--ANKKWCFTCEFESLI-LKSKD 564
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLS-SQGD 227
+ +SP ++ L I S ++EDAHEFL+ ++ ++S CL + S S +
Sbjct: 565 TNSPISPVGILSQLQNIGSQLGNGREEDAHEFLRLAVETMQSVCLMESGDNMSDSLKEET 624
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE-DVGSLGSALESFTKLEKIEDP 286
N++ FGG L SK++C CG S+ E ++DL++EIE ++ +L AL+ FT E + D
Sbjct: 625 NLMGLTFGGYLQSKIKCMKCGGKSECQERMMDLTVEIEGEITTLEEALQQFTSAETL-DG 683
Query: 287 ETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPY 346
E K+ C +CK +K++ + + P+V LKRF++ G + K++K + FP LDL P+
Sbjct: 684 ENKYHCVRCKSYEKAKKKMTVSEAPNVLTIALKRFQS-GKFG-KLNKPIRFPEILDLAPF 741
Query: 347 TSGGQNSDVELKYHLYAIVEHMG--SSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFV 404
SG SD+ + Y LY +V H+ ++ GHY Y+++ W +++DS VT VE E V
Sbjct: 742 MSG--TSDLPI-YRLYGVVVHLDIMNAAFSGHYVCYVKNFQSRWFKVDDSVVTAVELESV 798
Query: 405 LSQDAYILFYAK 416
L++ AY+LFYA+
Sbjct: 799 LAKGAYMLFYAR 810
>gi|11993475|gb|AAG42756.1|AF302665_1 ubiquitin-specific protease 15 [Arabidopsis thaliana]
Length = 924
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 113/313 (36%), Positives = 174/313 (55%), Gaps = 13/313 (4%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL N GN+C+ NA+LQ T T PLV L H R C G + +C++C L H+ + L
Sbjct: 439 GLVNCGNSCYANAVLQSLTCTKPLVAYLLRRSHSRSCSG--KDWCLMCELEQHV-MMLRE 495
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSS--QG 226
SG LS +++ ++ I+ QEDAHEFL+ L+ + S CL+ + + Q
Sbjct: 496 SGGPLSASRILSHMRSINCQIGDGSQEDAHEFLRLLVASMPSICLERLGGETKVDPRLQE 555
Query: 227 DNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIED-VGSLGSALESFTKLEKIED 285
+VQ +FGG L SK++C C S+ YE ++DL+LEI V AL FT+ E + D
Sbjct: 556 TTLVQHMFGGRLHSKVKCLRCDHESERYENIMDLTLEIYGWVEFFQDALIQFTRPEDL-D 614
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E + C +C V K+L + + P++ LKRF+ +G Y KI+K + FP LD+ P
Sbjct: 615 GENMYRCSRCAGYVRARKELSIHEAPNILTIVLKRFQ-EGRYG-KINKCISFPEMLDMIP 672
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGS--SPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
+ + + DV Y LYA++ H+ + + GHY SY++ W+R++DS + V
Sbjct: 673 FMT--RTGDVPPLYMLYAVIVHLDTLNASFSGHYISYVKDLRGNWYRIDDSEIHPVPMTQ 730
Query: 404 VLSQDAYILFYAK 416
V+S+ AY+LFY +
Sbjct: 731 VMSEGAYMLFYMR 743
>gi|15238468|ref|NP_201348.1| ubiquitin carboxyl-terminal hydrolase 17 [Arabidopsis thaliana]
gi|75262625|sp|Q9FKP5.1|UBP17_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17; AltName:
Full=Deubiquitinating enzyme 17; Short=AtUBP17; AltName:
Full=Ubiquitin thioesterase 17; AltName:
Full=Ubiquitin-specific-processing protease 17
gi|9759625|dbj|BAB11567.1| unnamed protein product [Arabidopsis thaliana]
gi|332010675|gb|AED98058.1| ubiquitin carboxyl-terminal hydrolase 17 [Arabidopsis thaliana]
Length = 731
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 114/318 (35%), Positives = 173/318 (54%), Gaps = 11/318 (3%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGN+C+ NA+LQC T PL+ L H + C + +C +C +H+ L
Sbjct: 330 GLVNLGNSCYANAVLQCLAFTRPLISYLIRGLHSKTC--RKKSWCFVCEF-EHLILKARG 386
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDN 228
LSP K++ L I ++EDAHEFL+C +D ++S L + +
Sbjct: 387 GESPLSPIKILSKLQKIGKHLGPGKEEDAHEFLRCAVDTMQSVFLKEAPAAGPFAEE-TT 445
Query: 229 IVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE-DVGSLGSALESFTKLEKIEDPE 287
+V FGG L SK++C C S+ E ++DL++EI+ D+GSL AL FT E + D E
Sbjct: 446 LVGLTFGGYLHSKIKCMACLHKSERPELMMDLTVEIDGDIGSLEEALAQFTAYE-VLDGE 504
Query: 288 TKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPYT 347
++ C +CK +K+LM+ + P++ LKRF++D K+ K + FP LD+ PY
Sbjct: 505 NRYFCGRCKSYQKAKKKLMILEGPNILTVVLKRFQSDN--FGKLSKPIHFPELLDISPYM 562
Query: 348 SGGQNSDVELKYHLYAIVEHMGSSPTC--GHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
S + D + Y LYA+V H+ + T GHY YI++ W +++DS V V+ E VL
Sbjct: 563 SDPNHGDHPV-YSLYAVVVHLDAMSTLFSGHYVCYIKTLDGDWFKIDDSNVFPVQLETVL 621
Query: 406 SQDAYILFYAKQGTEWVS 423
+ AY+L YA+ VS
Sbjct: 622 LEGAYMLLYARDSPRPVS 639
>gi|345806341|ref|XP_003435418.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like, partial
[Canis lupus familiaris]
Length = 597
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 107/312 (34%), Positives = 166/312 (53%), Gaps = 13/312 (4%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL+N+GNTC++NA LQC T+T PL + S H C T C++C L+ H+
Sbjct: 78 VGAGLQNMGNTCYVNATLQCLTYTEPLASYVLSQKHGTACRKQTS--CMLCTLQAHMTRV 135
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
L P +++ L + + F ++QEDAHE+L +LD ++ CL +S +Q
Sbjct: 136 LCH------PGRVLRPLPLLLAAFHTHKQEDAHEYLMFILDAMQQACLPEDKPSDSQHAQ 189
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
++Q +FGG S++QC +C S T EP +D+SL+I S+ ALE K E +E
Sbjct: 190 DSTLIQHIFGGYWRSQIQCLHCQGISSTLEPYLDISLDIGAAQSVSQALEQLVKPEMLEG 249
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E + C KC E+V K L V LKRF K+ K +++P LD++
Sbjct: 250 -ENAYHCSKCLEKVPASKVLTWHSCAKVLILVLKRFSDFTGN--KMTKEMQYPECLDMQH 306
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
S + L Y LYA++ H G S G YF ++++ WH+++D++++ L
Sbjct: 307 SLS--ERRAGPLVYVLYAVLVHAGWSCHSGRYFCFVKAGNGQWHKMDDAKISACVVTCAL 364
Query: 406 SQDAYILFYAKQ 417
Q AY+LFY ++
Sbjct: 365 RQLAYVLFYMQK 376
>gi|158285526|ref|XP_001237068.2| AGAP007521-PB [Anopheles gambiae str. PEST]
gi|157020034|gb|EAU77612.2| AGAP007521-PB [Anopheles gambiae str. PEST]
Length = 1053
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 112/327 (34%), Positives = 172/327 (52%), Gaps = 11/327 (3%)
Query: 93 VEKHWPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFD-HPRPCD-GATE 150
V+ W + VGAG+ N+GNTC++N+ LQ H + L S + H CD G +
Sbjct: 158 VQIGWKTTGRKWLVGAGMMNMGNTCYLNSTLQALFHVPAIANWLLSDEPHRAKCDDGGSG 217
Query: 151 GFCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLES 210
G C+ICA+ + L S+ P + L + +QEDAHEFL+ L++ +E
Sbjct: 218 GSCIICAMAKTL-LESQSNQTAFRPYLVYSKLRLVCKHLVPGRQEDAHEFLRYLVEAMEK 276
Query: 211 CCLDSKTKDESLS--SQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVG 268
+ + L S+ + ++ GG L S+++C +C S T++ DL L+I
Sbjct: 277 SYIGRTKNSKELDQYSKETTPLNQILGGYLRSEVKCLSCQHVSTTFQHFEDLLLDIRKAN 336
Query: 269 SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYV 328
S+ ALE + E++E E + CE CK +V+ KQ L++ P V LKRF G+
Sbjct: 337 SIDEALELYFARERLE--EMGYKCEACKRRVAATKQFSLERAPFVLCVQLKRFSMLGA-- 392
Query: 329 VKIDKHVEFPLELDLKPYTSGGQNSDV-ELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDT 387
KI+KHVE +LDL PY+S S+ +L Y L ++V H+GS+ CGHY + +
Sbjct: 393 -KINKHVELRSKLDLTPYSSPAMRSNGGKLTYRLTSMVTHLGSTQHCGHYTAIGHTDAGG 451
Query: 388 WHRLNDSRVTRVEEEFVLSQDAYILFY 414
+H +DS V + V+S +AYILFY
Sbjct: 452 YHVFDDSSVRPIGIHNVMSTNAYILFY 478
>gi|158285524|ref|XP_001687904.1| AGAP007521-PA [Anopheles gambiae str. PEST]
gi|157020033|gb|EDO64553.1| AGAP007521-PA [Anopheles gambiae str. PEST]
Length = 1219
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 112/327 (34%), Positives = 172/327 (52%), Gaps = 11/327 (3%)
Query: 93 VEKHWPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFD-HPRPCD-GATE 150
V+ W + VGAG+ N+GNTC++N+ LQ H + L S + H CD G +
Sbjct: 204 VQIGWKTTGRKWLVGAGMMNMGNTCYLNSTLQALFHVPAIANWLLSDEPHRAKCDDGGSG 263
Query: 151 GFCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLES 210
G C+ICA+ + L S+ P + L + +QEDAHEFL+ L++ +E
Sbjct: 264 GSCIICAMAKTL-LESQSNQTAFRPYLVYSKLRLVCKHLVPGRQEDAHEFLRYLVEAMEK 322
Query: 211 CCLDSKTKDESLS--SQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVG 268
+ + L S+ + ++ GG L S+++C +C S T++ DL L+I
Sbjct: 323 SYIGRTKNSKELDQYSKETTPLNQILGGYLRSEVKCLSCQHVSTTFQHFEDLLLDIRKAN 382
Query: 269 SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYV 328
S+ ALE + E++E E + CE CK +V+ KQ L++ P V LKRF G+
Sbjct: 383 SIDEALELYFARERLE--EMGYKCEACKRRVAATKQFSLERAPFVLCVQLKRFSMLGA-- 438
Query: 329 VKIDKHVEFPLELDLKPYTSGGQNSDV-ELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDT 387
KI+KHVE +LDL PY+S S+ +L Y L ++V H+GS+ CGHY + +
Sbjct: 439 -KINKHVELRSKLDLTPYSSPAMRSNGGKLTYRLTSMVTHLGSTQHCGHYTAIGHTDAGG 497
Query: 388 WHRLNDSRVTRVEEEFVLSQDAYILFY 414
+H +DS V + V+S +AYILFY
Sbjct: 498 YHVFDDSSVRPIGIHNVMSTNAYILFY 524
>gi|328854662|gb|EGG03793.1| hypothetical protein MELLADRAFT_78495 [Melampsora larici-populina
98AG31]
Length = 717
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 112/359 (31%), Positives = 191/359 (53%), Gaps = 18/359 (5%)
Query: 75 ISSSYGRYNWGSSLLSRPVEKHWPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPL-V 133
+ G + S +++P+ WP K +G G N GNTCF+NA LQ +T L V
Sbjct: 197 LRGQLGSVSKASLSVTKPIATIWP---KLQRMGPGFRNAGNTCFLNATLQALVYTPALAV 253
Query: 134 QALRSFDHPR-PCD-GATEGFCVICALRDHIELSLA--SSGKVLSPRKLVDNLNYISSFF 189
L +H R C + FC +C++R+ I + L + +V+ P + ++L I+
Sbjct: 254 GLLDRQEHTRDSCRLSHIKNFCALCSMRNLISMCLEPNKTARVIEPTPITNSLTKIAPRM 313
Query: 190 QRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGS 249
+ +QEDAHEFL+ L++ +++ L + + + R+F G S++ C +C
Sbjct: 314 RGGRQEDAHEFLRLLIEAMQNGALGGQEAQAKQKDKEATFIHRMFAGKFRSRVTCQHCEG 373
Query: 250 CSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDK 309
SDT++ +DLSL+I + ++ +AL KL+ ++ ++ CEKCK +K+L + +
Sbjct: 374 TSDTFDTFLDLSLDIGEANNVPNALRKLRKLDLLKG-ANQYKCEKCKRLRDAKKELSVHE 432
Query: 310 VPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-ELKYHLYAIVEHM 368
P + H+KRF G KI+K ++F LDL + + D +Y+LYA+V H
Sbjct: 433 APPILTLHIKRFNFRGK---KINKRIQFSDSLDL----NAAMDKDAPHTRYNLYAVVCHQ 485
Query: 369 GSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQD-AYILFYAKQGTEWVSSLL 426
G S T GHY+SYI++S W+R +D + RV+ V D AYI FY++ +++ + +
Sbjct: 486 GPSNTSGHYYSYIKTSDRQWYRADDCSIDRVDRGQVFRNDEAYIFFYSRDPEDFLDAAI 544
>gi|359322364|ref|XP_003639838.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Canis
lupus familiaris]
Length = 533
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 112/313 (35%), Positives = 169/313 (53%), Gaps = 15/313 (4%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL+N+GNTC++NA LQC T+T PL + S H C T C++C L+ H+
Sbjct: 78 VGAGLQNMGNTCYVNATLQCLTYTEPLASYVLSQKHGTACRKQTS--CMLCTLQAHMTRV 135
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
L G+VL L + + F ++QEDAHE+L +LD ++ CL +S +Q
Sbjct: 136 LCHPGRVLR------PLPLLLAAFHTHKQEDAHEYLMFILDAMQQACLPEDKPSDSQHAQ 189
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
++Q +FGG S++QC +C S S T EP +D+SL+I S+ ALE K E +E
Sbjct: 190 DSTLIQHIFGGYWRSQIQCLHCQSISSTLEPYLDISLDIGAAQSVSQALEQLVKPEMLEG 249
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKT-DGSYVVKIDKHVEFPLELDLK 344
E + C KC E+V K L L V LK F G+ K+ K +++P LD++
Sbjct: 250 -ENAYHCCKCLEKVPASKVLTLHSCAKVLILVLKGFSDFTGN---KMTKEMQYPECLDMQ 305
Query: 345 PYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFV 404
S + L Y LYA++ H G S G YF ++++ WH+++D++V+
Sbjct: 306 HSLS--EQRAGPLVYVLYAVLVHAGWSCHSGRYFCFVKAGNGQWHKMDDAKVSACVVTCA 363
Query: 405 LSQDAYILFYAKQ 417
L Q AY+LFY ++
Sbjct: 364 LRQLAYVLFYMQK 376
>gi|422295802|gb|EKU23101.1| hypothetical protein NGA_0518320 [Nannochloropsis gaditana CCMP526]
Length = 526
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 122/348 (35%), Positives = 177/348 (50%), Gaps = 44/348 (12%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATE--------------- 150
VG GL NLGNTCF+NA LQC + PL Q S
Sbjct: 134 VGPGLYNLGNTCFLNATLQCLAYLPPLAQYFLSKKEEERVPSVLSPGAGQGHRGGGQARG 193
Query: 151 GFCVICALRDHIE----------------LSLASSGKV-LSPRKLVDNLNYISSFFQRYQ 193
G+ + +RD I L+ G+ +SP+ +V NL ++ F+ +
Sbjct: 194 GWLGL--VRDLIANMHTGSGAGGGDRGDGLARREGGRSPISPKAIVGNLKALNRHFRVGR 251
Query: 194 QEDAHEFLQCLLDRLESCCLDS-KTKDESLSSQGDN-IVQRVFGGCLISKLQCCNCGSCS 251
QEDAHEFL+ LLD L+S CL + + K + + V R+FGG L S+++C CG CS
Sbjct: 252 QEDAHEFLRHLLDALQSGCLQAARVKSNAPGRLAETTFVHRIFGGYLRSQVRCTQCGHCS 311
Query: 252 DTYEPLIDLSLEIED-VGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKV 310
+TY+ +DLSLEI VG L AL FT +E + D ++ C C + V +K+L
Sbjct: 312 NTYDNFLDLSLEIHGKVGRLEEALARFTAVETL-DRANRWRCPACSQLVCAQKRLSFHTA 370
Query: 311 PSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGS 370
P+V LKRF GS K+ K+V +P L L SG + S +Y L ++ H G+
Sbjct: 371 PNVCTVQLKRF-MFGSRSSKLSKNVAYPESLRLS--LSGPEGSA---RYRLAGVLVHAGA 424
Query: 371 SPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQG 418
S GHY+S ++++ W+ ++D++V +V VL Q AY+LFY K G
Sbjct: 425 SVNMGHYYSLVKAANGCWYEMDDAQVRQVGLPTVLHQHAYLLFYVKVG 472
>gi|359496742|ref|XP_003635320.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like [Vitis
vinifera]
Length = 860
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 115/312 (36%), Positives = 173/312 (55%), Gaps = 13/312 (4%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL N GN+C+ NA+LQC T T PL L H + C E +C IC I L
Sbjct: 397 GLMNCGNSCYANAVLQCLTFTRPLASYLLQGLHSKAC--PKEDWCFICEFECLI-LEARE 453
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDN 228
LSP ++ + I S ++EDAHEFL+ +D ++S CL L ++
Sbjct: 454 GKSPLSPMGILSQIQRIGSHLGHGREEDAHEFLRYAVDTMQSVCLKDTGVVGPL-AEDTT 512
Query: 229 IVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE-DVGSLGSALESFTKLEKIEDPE 287
+V FGG L+SK++C C S+ E ++DL++EI+ D+G+L AL FT E I D E
Sbjct: 513 LVGLTFGGYLLSKIKCMKCRGKSERCERMMDLTVEIDGDIGTLEEALAQFTATE-ILDGE 571
Query: 288 TKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPYT 347
K+ C +C+ +K+LM+ + P++ LKRF++ S K++K V FP L++ PY
Sbjct: 572 NKYQCGRCRSYEKAKKKLMVLEAPNILTIVLKRFQS--SNFGKLNKSVRFPETLNMTPYM 629
Query: 348 SGGQNSDVELKYHLYAIVEHMG--SSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
SG D Y LYA+V H+ ++ GHY ++++ D W R++DS VT VE + VL
Sbjct: 630 SG--TDDRYPVYSLYAVVVHLDIMNAAFSGHYVCFVKNLGD-WFRIDDSTVTPVELDRVL 686
Query: 406 SQDAYILFYAKQ 417
+ AY+L YA++
Sbjct: 687 LEGAYMLLYARR 698
>gi|356498842|ref|XP_003518257.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like [Glycine
max]
Length = 1036
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 112/312 (35%), Positives = 178/312 (57%), Gaps = 13/312 (4%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL N GN+C+ NA+LQC T PL L H + C A + +C C I L
Sbjct: 507 GLINCGNSCYANAVLQCLAVTPPLTAYLLQGLHSKSC--ANKKWCFTCEFESLI-LKSKD 563
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGD- 227
+ +SP ++ L I S ++EDAHEFL+ +++ ++S CL + S S + +
Sbjct: 564 TNSPMSPLGILSQLQNIGSQLGNGREEDAHEFLRLVVETMQSVCLMESGDNMSDSLKEET 623
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE-DVGSLGSALESFTKLEKIEDP 286
N++ FGG L SK++C CG S+ E ++DL++EIE ++ +L AL FT E + D
Sbjct: 624 NLMGLTFGGYLQSKIKCMKCGGKSERQERMMDLTVEIEGEIATLEEALRQFTSAETL-DG 682
Query: 287 ETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPY 346
E K+ C +CK +K++ + + P+V LKRF++ G + K++K + FP LDL P+
Sbjct: 683 ENKYRCVRCKSYEKAKKKMTVLEAPNVLTIALKRFQS-GKFG-KLNKPIRFPEILDLAPF 740
Query: 347 TSGGQNSDVELKYHLYAIVEHMG--SSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFV 404
SG SD+ + Y LY +V H+ ++ GHY Y+++ W +++DS VT VE E V
Sbjct: 741 MSG--TSDLPI-YRLYGVVVHLDIMNAAFSGHYVCYVKNFQSRWFKVDDSVVTAVELESV 797
Query: 405 LSQDAYILFYAK 416
L++ AY+LFY++
Sbjct: 798 LAKGAYMLFYSR 809
>gi|18416380|ref|NP_567705.1| ubiquitin carboxyl-terminal hydrolase 16 [Arabidopsis thaliana]
gi|75265551|sp|Q9SB51.1|UBP16_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 16; AltName:
Full=Deubiquitinating enzyme 16; Short=AtUBP16; AltName:
Full=Ubiquitin thioesterase 16; AltName:
Full=Ubiquitin-specific-processing protease 16
gi|4220534|emb|CAA23007.1| putative protein [Arabidopsis thaliana]
gi|7269306|emb|CAB79366.1| putative protein [Arabidopsis thaliana]
gi|332659526|gb|AEE84926.1| ubiquitin carboxyl-terminal hydrolase 16 [Arabidopsis thaliana]
Length = 1008
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 112/325 (34%), Positives = 177/325 (54%), Gaps = 18/325 (5%)
Query: 97 WPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVIC 156
+ I+ +P GL N+GN+CF N + QC T PL H R C + C C
Sbjct: 535 YKIEFQP----CGLINVGNSCFANVVFQCLMFTPPLTTYFLQQFHSRACTKKEQ--CFTC 588
Query: 157 ALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSK 216
+ + + LSP L+ L I F ++EDAHEFL+ ++D ++S C+ +
Sbjct: 589 GF-EKLVVKAKEEKSPLSPNGLLSQLQNIGIFLGNGKEEDAHEFLRFVVDTMQSVCIKAS 647
Query: 217 TKDESLSSQGDN--IVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE-DVGSLGSA 273
D + SS+ ++ ++ FGG L SK++C C S+ E ++DL++EI+ D+ +L A
Sbjct: 648 EYDMTKSSKLEDTTLIGLTFGGYLRSKIKCMKCQVKSELREKMMDLTVEIDGDISTLDDA 707
Query: 274 LESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDK 333
L FT+ E I D E K+ C CK +K+L + + P+V LKRF+ G + K++K
Sbjct: 708 LRRFTRTE-ILDGENKYRCGSCKSYERAKKKLKITEPPNVLTIALKRFQA-GKF-GKLNK 764
Query: 334 HVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMG--SSPTCGHYFSYIRSSPDTWHRL 391
+ FP LDL PY SGG S+ Y LY ++ H+ ++ GHY YIR+ + W++
Sbjct: 765 LIRFPETLDLAPYVSGG--SEKSHDYKLYGVIVHLDVMNAAFSGHYVCYIRNQ-NKWYKA 821
Query: 392 NDSRVTRVEEEFVLSQDAYILFYAK 416
+DS V + E +L++ AY+LFYA+
Sbjct: 822 DDSTVVTSDVERILTKGAYMLFYAR 846
>gi|11993477|gb|AAG42757.1|AF302666_1 ubiquitin-specific protease 16 [Arabidopsis thaliana]
Length = 1008
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 112/325 (34%), Positives = 177/325 (54%), Gaps = 18/325 (5%)
Query: 97 WPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVIC 156
+ I+ +P GL N+GN+CF N + QC T PL H R C + C C
Sbjct: 535 YKIEFQP----CGLINVGNSCFANVVFQCLMFTPPLTTYFLQQFHSRACTKKEQ--CFTC 588
Query: 157 ALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSK 216
+ + + LSP L+ L I F ++EDAHEFL+ ++D ++S C+ +
Sbjct: 589 GF-EKLVVKAKEEKSPLSPNGLLSQLQNIGIFLGNGKEEDAHEFLRFVVDTMQSVCIKAS 647
Query: 217 TKDESLSSQGDN--IVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE-DVGSLGSA 273
D + SS+ ++ ++ FGG L SK++C C S+ E ++DL++EI+ D+ +L A
Sbjct: 648 EYDMTKSSKLEDTTLIGLTFGGYLRSKIKCMKCQVKSELREKMMDLTVEIDGDISTLDDA 707
Query: 274 LESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDK 333
L FT+ E I D E K+ C CK +K+L + + P+V LKRF+ G + K++K
Sbjct: 708 LRRFTRTE-ILDGENKYRCGSCKSYERAKKKLKITEPPNVLTIALKRFQA-GKF-GKLNK 764
Query: 334 HVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMG--SSPTCGHYFSYIRSSPDTWHRL 391
+ FP LDL PY SGG S+ Y LY ++ H+ ++ GHY YIR+ + W++
Sbjct: 765 LIRFPETLDLAPYVSGG--SEKSHDYKLYGVIVHLDVMNAAFSGHYVCYIRNQ-NKWYKA 821
Query: 392 NDSRVTRVEEEFVLSQDAYILFYAK 416
+DS V + E +L++ AY+LFYA+
Sbjct: 822 DDSTVVTSDVERILTKGAYMLFYAR 846
>gi|312379746|gb|EFR25927.1| hypothetical protein AND_08313 [Anopheles darlingi]
Length = 1237
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 113/336 (33%), Positives = 174/336 (51%), Gaps = 20/336 (5%)
Query: 93 VEKHWPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRS-FDHPRPCD-GATE 150
V+ W + VGAG+ N+GNTC++N+ LQ H + L S H CD G +
Sbjct: 274 VQVGWKTTGRKWQVGAGMINMGNTCYLNSTLQALFHVPAIANWLVSDVQHRARCDDGGSG 333
Query: 151 GFCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLES 210
G C+ICA+ + L S+ + P + L + +QEDAHEFL+ L++ +E
Sbjct: 334 GSCIICAMAKTL-LDSQSNQSAIKPHLVYSKLRLVCKHLVPGRQEDAHEFLRYLVEAMEK 392
Query: 211 CCLDSKTKDESLS--SQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVG 268
L + L S+ + ++ GG L S+++C +C S T++ DL L+I
Sbjct: 393 SFLGRYKNSKELDQYSKETTPLNQILGGYLRSEVKCLSCHHISTTFQHFEDLLLDIRRAN 452
Query: 269 SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYV 328
S+ AL+ + E++E E + CE CK++V+ KQ L++VP V LKRF +G+
Sbjct: 453 SIDEALKLYFDRERLE--ELSYNCEACKKRVAATKQFSLERVPFVLCVQLKRFTINGT-- 508
Query: 329 VKIDKHVEFPLELDLKPYTSGGQNSDV----------ELKYHLYAIVEHMGSSPTCGHYF 378
KI+KHVE +LDL PY+S +L Y L ++V H+G+S CGHY
Sbjct: 509 -KINKHVELRSQLDLTPYSSSSSQQQQQRTSGSSSAGKLTYRLTSMVTHLGTSQHCGHYT 567
Query: 379 SYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFY 414
+ ++ +H +DS V V V+S +AYILFY
Sbjct: 568 AIGQTEGGAYHVFDDSSVRPVGMHNVMSTNAYILFY 603
>gi|357477609|ref|XP_003609090.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
gi|355510145|gb|AES91287.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
Length = 353
Score = 182 bits (462), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 113/327 (34%), Positives = 179/327 (54%), Gaps = 25/327 (7%)
Query: 108 AGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPR--PCDGATEG-FCVICALRDHIEL 164
AGL N+ NTCF+NA+LQ FTH LPL + L D C A E FC++CALR+H+
Sbjct: 23 AGLRNINNTCFMNAVLQAFTHILPLHRGLLLLDLKLHSSCPRADENKFCILCALRNHLTE 82
Query: 165 SLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSS 224
+ S ++P +L + L + + +D HEF+ L L+ C L+
Sbjct: 83 AGHPSRDTVNPSELYNGLQSFMPEYTTGKHQDPHEFMIKALTALKGCLLEY--------- 133
Query: 225 QGDNIVQRVFGGCLISKLQCCNCGSCSD-TYEPLIDLSLEIEDVGSLGSALESFTKLEKI 283
+N++ F G ++ +L+CC+C + + + + DL+L I++ +AL+ + + KI
Sbjct: 134 --NNLIDLTFRGAVVKQLRCCSCKASDEPVHLEVFDLTLNIDNASDTQTALDIYFNISKI 191
Query: 284 EDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKR--FKTD----GSYVVKIDKHVEF 337
+ C C + E++ L + PSV HL R F+ D + K +K+V F
Sbjct: 192 DGA----ACSFCNKVGFCEEKRWLLEAPSVVVIHLNRLVFEFDPHSRKGHTRKENKNVGF 247
Query: 338 PLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVT 397
+++DL+PY + KY LYAIVEH+G+S GHY Y+R D W+ ++D+ VT
Sbjct: 248 KMDIDLEPYALSPTEKEGYWKYDLYAIVEHVGASVNSGHYICYVRCVGDQWYSMSDTVVT 307
Query: 398 RVEEEFVLSQDAYILFYAKQGTEWVSS 424
+V EE V+S++AY+LFY ++GT W SS
Sbjct: 308 KVSEEAVMSKEAYLLFYLRKGTPWFSS 334
>gi|157131284|ref|XP_001662174.1| hypothetical protein AaeL_AAEL002698 [Aedes aegypti]
gi|108881830|gb|EAT46055.1| AAEL002698-PA [Aedes aegypti]
Length = 1100
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 111/328 (33%), Positives = 171/328 (52%), Gaps = 13/328 (3%)
Query: 93 VEKHWPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRS-FDHPRPCDGATEG 151
V+ W GAG N+GNTC++N+ LQ H + L S H C+ G
Sbjct: 182 VQLGWKATGHKWNTGAGFTNVGNTCYLNSTLQALFHVPAIANWLLSDKAHRERCEDNVNG 241
Query: 152 -FCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLES 210
C+ICA+ + S SS + P +V L + +QEDAHEFL+ L++ +E
Sbjct: 242 QGCIICAMAKTLMASQNSSQGSIKPYLVVSKLQLVCKHLVPGRQEDAHEFLRYLVEAMEK 301
Query: 211 CCL----DSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIED 266
L +SK D+ S+ + ++ GG L S+++C +C S T++ DL L+I
Sbjct: 302 SYLARFKNSKELDQY--SKETTPLNQILGGYLRSEVKCLSCHHVSTTFQHFEDLLLDIRK 359
Query: 267 VGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGS 326
V S+ AL + E++E E ++ CE CK++V+ KQ L++ P LKRF G+
Sbjct: 360 VNSIEEALTMYFARERLE--EMQYKCEACKKKVAATKQFSLERAPFALCIQLKRFSMMGN 417
Query: 327 YVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPD 386
KI+KHVE LDL P++S S+ L Y L ++V H+GS+ CGHY + +
Sbjct: 418 ---KINKHVELKTRLDLTPFSSKSAVSNCRLTYKLVSMVTHLGSTQHCGHYTAIGGTESG 474
Query: 387 TWHRLNDSRVTRVEEEFVLSQDAYILFY 414
T++ +DS V + + V S +AYI+FY
Sbjct: 475 TYYVFDDSLVRPISLQNVTSTNAYIIFY 502
>gi|297735922|emb|CBI18698.3| unnamed protein product [Vitis vinifera]
Length = 669
Score = 182 bits (461), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 115/318 (36%), Positives = 171/318 (53%), Gaps = 17/318 (5%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDG-------ATEGFCVICALRDH 161
GL N GN+C+ NA+LQC T T PL L H + C E +C IC
Sbjct: 359 GLMNCGNSCYANAVLQCLTFTRPLASYLLQGLHSKACKFLFMTPLCPKEDWCFICEFECL 418
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES 221
I L LSP ++ + I S ++EDAHEFL+ +D ++S CL
Sbjct: 419 I-LEAREGKSPLSPMGILSQIQRIGSHLGHGREEDAHEFLRYAVDTMQSVCLKDTGVVGP 477
Query: 222 LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE-DVGSLGSALESFTKL 280
L ++ +V FGG L+SK++C C S+ E ++DL++EI+ D+G+L AL FT
Sbjct: 478 L-AEDTTLVGLTFGGYLLSKIKCMKCQGKSERCERMMDLTVEIDGDIGTLEEALAQFTAT 536
Query: 281 EKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE 340
E I D E K+ C +C+ +K+LM+ + P++ LKRF++ S K++K V FP
Sbjct: 537 E-ILDGENKYQCGRCRSYEKAKKKLMVLEAPNILTIVLKRFQS--SNFGKLNKSVRFPET 593
Query: 341 LDLKPYTSGGQNSDVELKYHLYAIVEHMG--SSPTCGHYFSYIRSSPDTWHRLNDSRVTR 398
L+L PY SG D Y LYA+V H+ ++ GHY ++++ W R++DS VT
Sbjct: 594 LNLTPYMSG--TDDRYPVYSLYAVVVHLDIMNAAFSGHYVCFVKNFLGDWFRIDDSTVTP 651
Query: 399 VEEEFVLSQDAYILFYAK 416
VE + VL + AY+L YA+
Sbjct: 652 VELDRVLLEGAYMLLYAR 669
>gi|168044470|ref|XP_001774704.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674004|gb|EDQ60519.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 411
Score = 182 bits (461), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 106/299 (35%), Positives = 169/299 (56%), Gaps = 13/299 (4%)
Query: 105 GVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIEL 164
GV GL N GN+CF N +LQC T+T PL L + H C +C +C L+ H+
Sbjct: 114 GVPCGLLNCGNSCFANVVLQCLTYTRPLTAYLLNGSHEEDCK--RNDWCFMCELQSHVH- 170
Query: 165 SLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLD--SKTKDESL 222
++ + SP +++ + I + +QEDAHEF++ +D ++S CLD KD
Sbjct: 171 NVRQNRNPFSPIRILSRIRNIGNHLGYGRQEDAHEFMRFAIDSMQSICLDEFGGEKDVDP 230
Query: 223 SSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDV-GSLGSALESFTKLE 281
++Q ++ +FGG L S+++C C S+ YE ++DL++EI V SL A+ FT +E
Sbjct: 231 ATQETTLIHHIFGGHLQSQVKCMQCHHESNRYESMMDLAVEIHGVVDSLEDAIAQFTTIE 290
Query: 282 KIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLEL 341
+ D + K+ C++C V KQL + + P+V LKRF++ G + K++K V FP L
Sbjct: 291 ML-DGDNKYKCDRCNAYVRARKQLTVYEAPNVLTIALKRFQS-GKFG-KLNKRVTFPEVL 347
Query: 342 DLKPYTSGGQNSDVELKYHLYAIVEH--MGSSPTCGHYFSYIRSSPDTWHRLNDSRVTR 398
D+ PY SG +D L Y LYA+V H M ++ GHY +++ S W++++D +V R
Sbjct: 348 DMSPYMSGA--NDHPLLYRLYAVVVHVDMLNASFFGHYICFVKDSNGVWYKIDDRKVQR 404
>gi|255545936|ref|XP_002514028.1| conserved hypothetical protein [Ricinus communis]
gi|223547114|gb|EEF48611.1| conserved hypothetical protein [Ricinus communis]
Length = 1060
Score = 182 bits (461), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 113/326 (34%), Positives = 178/326 (54%), Gaps = 24/326 (7%)
Query: 99 IQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICAL 158
++++P GL N GN+C+ NA+LQC T PL H + C + +C C
Sbjct: 518 VEMRP----CGLINCGNSCYANAVLQCLAFTPPLTAYFVQGLHSKEC--VNKEWCFTCEF 571
Query: 159 RDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTK 218
+ + L LSP ++ L I+S ++EDAHEFL+ +D ++S CL K
Sbjct: 572 -ESLMLKAKEGKSPLSPIGILSQLQNIASQLGTGREEDAHEFLRYAIDTMQSVCL----K 626
Query: 219 DESLSSQGD-----NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE-DVGSLGS 272
+ +++ G ++ FGG L SK++C C S+ +E ++DL++EIE D+ L
Sbjct: 627 EAGVNALGSFEEETTLIGLTFGGYLRSKIKCMKCHYKSERHERMMDLTVEIEGDIEKLED 686
Query: 273 ALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKID 332
AL FT E I D + K+ C +CK +K+L + + P+V LKRF++ G + K++
Sbjct: 687 ALRRFTGTE-ILDGDNKYQCGRCKSYEKAKKKLTILEAPNVLTIALKRFQS-GKFG-KLN 743
Query: 333 KHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMG--SSPTCGHYFSYIRSSPDTWHR 390
K + FP LDL PY SG SD Y LY +V H+ ++ GHY Y+++ + W +
Sbjct: 744 KSIRFPEILDLAPYMSG--TSDKSPIYRLYGVVVHLDIMNASFSGHYVCYVKNVQNKWFK 801
Query: 391 LNDSRVTRVEEEFVLSQDAYILFYAK 416
++DS VT VE E VL++ AY+L YA+
Sbjct: 802 IDDSTVTAVELERVLTKGAYMLLYAR 827
>gi|440803342|gb|ELR24249.1| Ubiquitin carboxylterminal hydrolase [Acanthamoeba castellanii str.
Neff]
Length = 916
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 102/315 (32%), Positives = 150/315 (47%), Gaps = 49/315 (15%)
Query: 102 KPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDH 161
KP+ +GAGL N+GNTCF+N+ LQC T+ PL +S H + C GFC +C + H
Sbjct: 6 KPSTIGAGLHNVGNTCFLNSTLQCLTYCPPLANYFQSRQHSKACRKV--GFCAMCVMERH 63
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES 221
+ +L ++ + P+++V L I F+ +QEDA EFL LL + L K E+
Sbjct: 64 VVAALKATSGAIVPKEIVSQLRAIVKHFRLGRQEDAQEFLCYLLSGMHKSSLPQGEKLEA 123
Query: 222 LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLE 281
Q ++V R+FGG L S L+C
Sbjct: 124 RIEQ-TSVVHRIFGGHLQSSLECT------------------------------------ 146
Query: 282 KIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLEL 341
C ++ +KQL + + P+V A LKRF + KI K + +P +L
Sbjct: 147 ---------AMRLCAKRSRAKKQLSIHEAPNVLAIQLKRFSYRSMFGGKISKFISYPAKL 197
Query: 342 DLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEE 401
LKP+ S Q D Y LY ++ H G GHY+ YI++S WH +NDS +V +
Sbjct: 198 SLKPFMSKNQ-YDSNPCYDLYGVLVHSGYDTRAGHYYCYIKNSNGIWHEMNDSTRRQVSQ 256
Query: 402 EFVLSQDAYILFYAK 416
E V+ Q AY+LFY +
Sbjct: 257 EQVMKQQAYLLFYVR 271
>gi|449511450|ref|XP_004163959.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 16-like, partial [Cucumis sativus]
Length = 1115
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 110/339 (32%), Positives = 182/339 (53%), Gaps = 28/339 (8%)
Query: 82 YNWGSSLLSRPVEKHWPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDH 141
YNW ++++P+G L N GN+C+ N +LQC T T PL H
Sbjct: 588 YNWNK------------VELQPSG----LVNCGNSCYANVVLQCLTFTPPLTAYFLQGLH 631
Query: 142 PRPCDGATEGFCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFL 201
+ C A E +C C I L LSP +++ L I S ++EDAHEFL
Sbjct: 632 SKAC--AKERWCFTCEFESLI-LEAKEGKSPLSPFRIISQLRKIGSQLVNGKEEDAHEFL 688
Query: 202 QCLLDRLESCC-LDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDL 260
+C +D ++S C ++++ + ++ FGG L+SK++C C + S+ E ++DL
Sbjct: 689 RCAIDTMQSICFMEAQASRSGPVEEETTLIGLTFGGYLLSKIKCTRCENKSERIERILDL 748
Query: 261 SLEIE-DVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLK 319
++EI D+ ++ AL+ +T E I D + ++ C +C V K+L + + P++ LK
Sbjct: 749 TVEISGDIETIEEALQQYTSPE-ILDGDNRYHCTRCNSYVKARKRLSILEAPNILTIALK 807
Query: 320 RFKTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMG--SSPTCGHY 377
RF++ G + K++K V F LDL PY S SD Y LY ++ H+ ++ GHY
Sbjct: 808 RFQS-GKFG-KLNKPVIFSEILDLAPYMS--SRSDKSPVYRLYGVIVHLDVMNAAFSGHY 863
Query: 378 FSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAK 416
YIR++ + W +++DS VT ++ + VL++ AY+LFYA+
Sbjct: 864 VCYIRNNQNKWFKVDDSTVTAMDVKNVLTRGAYMLFYAR 902
>gi|452824642|gb|EME31643.1| ubiquitin carboxyl-terminal hydrolase 36/42 [Galdieria sulphuraria]
Length = 605
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 111/305 (36%), Positives = 160/305 (52%), Gaps = 13/305 (4%)
Query: 107 GAGLENLGNTCFINAILQCFTHTLPLVQAL--RSFDHPRPCDGATEGFCVICALRDHIE- 163
G GL NLGNTCF+NA LQ H P AL + F C + G+C ICA+ +
Sbjct: 94 GKGLRNLGNTCFLNAALQSLLHCPPFATALLEKIFSAASNCPSHS-GYCSICAVEKTAQN 152
Query: 164 -LSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESL 222
S +S + SP LV NL +S F +Q DAHE+++ LLD + L
Sbjct: 153 VFSSDTSFQSYSPVDLVRNLKVLSRNFTPGRQADAHEYIRFLLDDMNRILLGIPRGKLCH 212
Query: 223 SSQGD--NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKL 280
Q + +V +FGGC SK+ C NCGS SDT EP +D+SL++E V +L AL+ FT
Sbjct: 213 DRQQEMHTLVHEIFGGCYESKVSCQNCGSSSDTVEPFLDVSLDLEGVSTLAKALKGFTTP 272
Query: 281 EKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE 340
E++ P F C +CK++ K ++P+V FHLKRF+ K +K V +
Sbjct: 273 ERLFGPNRYF-CSQCKQRTDASKVFQFRRIPNVFIFHLKRFRLSK----KENKFVSYDET 327
Query: 341 LDLKPYTSGGQNSDVE-LKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRV 399
D P+ NS + + Y L A++ H G S GHY++Y+R+S W+ +D +RV
Sbjct: 328 FDFSPFIPLKGNSIRKPVYYRLCAVIVHEGFSIHGGHYYAYVRNSNGIWYLKDDECTSRV 387
Query: 400 EEEFV 404
++ V
Sbjct: 388 VQQKV 392
>gi|47226065|emb|CAG04439.1| unnamed protein product [Tetraodon nigroviridis]
Length = 269
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 109/324 (33%), Positives = 164/324 (50%), Gaps = 61/324 (18%)
Query: 93 VEKHWPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGF 152
+ +W Q K VGAGLEN+GNTC++N+ LQC T+T P + S +H C GF
Sbjct: 7 IHLNWTQQFK---VGAGLENVGNTCYLNSALQCLTYTPPFANYMLSQEHSATCKKL--GF 61
Query: 153 CVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCC 212
C++C ++ HI S F+R+ +E
Sbjct: 62 CMMCTMQAHI-----------------------SKVFKRFDRE----------------- 81
Query: 213 LDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGS 272
+Q + +VFGG L S+++C NC + SDT+E +++ LEI+ V + +
Sbjct: 82 -----------TQETTFIHQVFGGQLRSRIKCLNCQAVSDTFETFLNILLEIKTVSDVST 130
Query: 273 ALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKID 332
ALE F + E + P+ ++C CK+ V+ K L + + +V LKRF D KI+
Sbjct: 131 ALEQFVRPEILGGPDA-YSCSSCKKMVTAIKSLTIHRSTNVLTLVLKRF--DICAGEKIN 187
Query: 333 KHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLN 392
K V +P LDL P+ S Q L Y LYA++ H G S GHYF YI++S W+R+N
Sbjct: 188 KDVRYPEYLDLYPFMSETQEKP--LVYRLYAVLVHYGRSSHSGHYFCYIKASDGQWYRMN 245
Query: 393 DSRVTRVEEEFVLSQDAYILFYAK 416
D+ V + + VL++ AY+LFY K
Sbjct: 246 DNSVIITDIQSVLAKQAYVLFYIK 269
>gi|218202292|gb|EEC84719.1| hypothetical protein OsI_31685 [Oryza sativa Indica Group]
Length = 927
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 111/312 (35%), Positives = 174/312 (55%), Gaps = 12/312 (3%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGN+C+ NA+LQC T PL L H R C + + +C +C I L
Sbjct: 383 GLVNLGNSCYANAVLQCLAFTRPLTAYLTEGLHSRNC--SKKEWCFMCEFEKLI-LEGRR 439
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLS-SQGD 227
LSP ++ +L I S F ++EDAHEFL+ +D ++S + K+ +
Sbjct: 440 GKSHLSPTGILSHLRDIGSSFGPGREEDAHEFLRYAIDTMQSASMKEAKKNGVYGLPEET 499
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE-DVGSLGSALESFTKLEKIEDP 286
+VQ +FGG L SK++C C S+ E ++DL++EI+ D+ +L AL FT E I D
Sbjct: 500 TLVQLIFGGYLRSKIKCTMCQGSSEQCERILDLTVEIDGDINTLEEALHRFTSTE-ILDG 558
Query: 287 ETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPY 346
+ ++ C +CK +K+L + + P++ LKR+++ G++ KI+K V F L+L Y
Sbjct: 559 DNRYNCSRCKSYERAKKKLTISEAPNILTIALKRYQS-GNFG-KINKAVRFTEYLNLSNY 616
Query: 347 TSGGQNSDVELKYHLYAIVEH--MGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFV 404
S D+ Y LYA+V H + ++ GHY Y++ + WH+++DS+V V E V
Sbjct: 617 MSTAD--DISPVYQLYAVVVHHDVMNAAFSGHYVCYVKDTQGKWHKMDDSQVKPVSLEKV 674
Query: 405 LSQDAYILFYAK 416
LS+ AY+LFYA+
Sbjct: 675 LSKCAYMLFYAR 686
>gi|449461409|ref|XP_004148434.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like [Cucumis
sativus]
Length = 1113
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 110/339 (32%), Positives = 182/339 (53%), Gaps = 28/339 (8%)
Query: 82 YNWGSSLLSRPVEKHWPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDH 141
YNW ++++P+G L N GN+C+ N +LQC T T PL H
Sbjct: 586 YNWNK------------VELQPSG----LVNCGNSCYANVVLQCLTFTPPLTAYFLQGLH 629
Query: 142 PRPCDGATEGFCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFL 201
+ C A E +C C I L LSP +++ L I S ++EDAHEFL
Sbjct: 630 SKAC--AKERWCFTCEFESLI-LEAKEGKSPLSPFRIISQLRKIGSQLVNGKEEDAHEFL 686
Query: 202 QCLLDRLESCC-LDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDL 260
+C +D ++S C ++++ + ++ FGG L+SK++C C + S+ E ++DL
Sbjct: 687 RCAIDTMQSICFMEAQASRSGPVEEETTLIGLTFGGYLLSKIKCTRCENKSERIERILDL 746
Query: 261 SLEIE-DVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLK 319
++EI D+ ++ AL+ +T E I D + ++ C +C V K+L + + P++ LK
Sbjct: 747 TVEISGDIETIEEALQQYTSPE-ILDGDNRYHCTRCNSYVKARKRLSILEAPNILTIALK 805
Query: 320 RFKTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMG--SSPTCGHY 377
RF++ G + K++K V F LDL PY S SD Y LY ++ H+ ++ GHY
Sbjct: 806 RFQS-GKFG-KLNKPVIFSEILDLAPYMS--SRSDKSPVYRLYGVIVHLDVMNAAFSGHY 861
Query: 378 FSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAK 416
YIR++ + W +++DS VT ++ + VL++ AY+LFYA+
Sbjct: 862 VCYIRNNQNKWFKVDDSTVTAMDVKNVLTRGAYMLFYAR 900
>gi|440804615|gb|ELR25492.1| ubiquitin specific protease, putative [Acanthamoeba castellanii
str. Neff]
Length = 695
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 110/335 (32%), Positives = 170/335 (50%), Gaps = 30/335 (8%)
Query: 83 NWGSSLLSRPVEKHWPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHP 142
N SL S P + + +P +G GL N GNTC+IN++LQCF+HT PL L S +H
Sbjct: 61 NAAPSLFS-PTQLSNLLSTRPQELGVGLVNRGNTCYINSVLQCFSHTAPLRAYLASSEHS 119
Query: 143 RPCDGATEGFCVICALRDHI-ELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFL 201
R C T GFC++CAL +H +L + V+ + SS Q Y+ + +
Sbjct: 120 RSCKVRTHGFCLLCALEEHTKQLFREFASSVM--------MGMQSSILQNYRAQHPN--- 168
Query: 202 QCLLDRLESCCLDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLS 261
+ + ++V ++FGG S+++C C + YEP +DL+
Sbjct: 169 --------------GPPNLGPGFEETSLVYQLFGGRSRSRVRCGACSAIVTNYEPFLDLN 214
Query: 262 LEIEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRF 321
LE+ SL AL+S+T +E D T + C +C + V+ +KQL +D+ P + LKRF
Sbjct: 215 LELSAGASLEEALDSYTTIEHF-DLSTGYKCGRCNKVVTAQKQLTVDRAPPILVVQLKRF 273
Query: 322 KTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYI 381
S KI+K V F +LD+ S + + + Y LY + H G + GHY S+I
Sbjct: 274 DV-MSGGGKINKTVTFREQLDIAKVMSEDKKEEGGVLYELYGTIVHYGRTMFSGHYVSFI 332
Query: 382 RSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAK 416
+S+ WH +D +V V VL Q+AY+LF+ +
Sbjct: 333 KSN-GLWHLFDDDQVVEVNNAIVLKQNAYMLFFQR 366
>gi|297799550|ref|XP_002867659.1| ubiquitin-specific protease 16 [Arabidopsis lyrata subsp. lyrata]
gi|297313495|gb|EFH43918.1| ubiquitin-specific protease 16 [Arabidopsis lyrata subsp. lyrata]
Length = 1007
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 109/313 (34%), Positives = 170/313 (54%), Gaps = 14/313 (4%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL N+GN+CF N + QC T PL H R C + C C + + L
Sbjct: 541 GLINVGNSCFANVVFQCLMFTPPLTTYFLQQLHSRACTKKEQ--CFTCGF-EKLVLKAKE 597
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDN 228
LSP L+ L I F ++EDAHEFL+ ++D ++S C+ + D SS+ ++
Sbjct: 598 GKSPLSPNGLLSQLQNIGIFLGNGKEEDAHEFLRFVVDTMQSVCIKASEYDMPKSSKLED 657
Query: 229 --IVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE-DVGSLGSALESFTKLEKIED 285
++ FGG L SK++C C S+ E ++DL++EI+ D+ +L AL FT+ E I D
Sbjct: 658 TTLIGLTFGGYLRSKIKCMKCQVKSELREKMMDLTVEIDGDISTLDDALRRFTRTE-ILD 716
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
+ K+ C CK +K+L + P+V LKRF+ G + K++K + FP LDL P
Sbjct: 717 GDNKYRCGSCKSYERAKKKLKITDPPNVLTIALKRFQA-GKF-GKLNKLIRFPETLDLAP 774
Query: 346 YTSGGQNSDVELKYHLYAIVEHMG--SSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
Y SGG S+ Y LY ++ H+ ++ GHY YIR+ + W++ +DS V + E
Sbjct: 775 YVSGG--SEKSHDYKLYGVIVHLDIMNAAFSGHYVCYIRNQ-NKWYKADDSTVVTSDVER 831
Query: 404 VLSQDAYILFYAK 416
++++ AY+LFYA+
Sbjct: 832 IMTKGAYMLFYAR 844
>gi|357133052|ref|XP_003568142.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 25-like
[Brachypodium distachyon]
Length = 641
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 105/320 (32%), Positives = 172/320 (53%), Gaps = 20/320 (6%)
Query: 111 ENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGA---TEGFCVICAL-RDHIELSL 166
+NLGNTC++N++LQC T PL + H C + C C L R + +
Sbjct: 25 KNLGNTCYLNSVLQCLASTPPLANFCLNSRHSNLCQKVFPNRDKECAFCVLERQIVRMLR 84
Query: 167 ASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQG 226
A +G + SP K++ L + F+ +QEDAHEFL+ ++D + CL + + + S+ G
Sbjct: 85 AEAGALDSPGKIIRCLPLFAEHFRWGRQEDAHEFLRYVIDACHTACLRVRKRLPAASANG 144
Query: 227 D------------NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSAL 274
D +++ FGG L+S+++C C S+ + ++D+SL++ S+G AL
Sbjct: 145 DCGQEEGRGQGNCMLMRETFGGALLSQVKCLVCKGESNKTDEIMDISLDLLGSSSVGDAL 204
Query: 275 ESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKH 334
F + E +E K++CE+CK+ S KQ+ + + P V LKRF +G KI+++
Sbjct: 205 ACFFRPELLEGA-NKYSCERCKKLTSARKQMFILRAPKVLVIQLKRF--EGINGGKINRN 261
Query: 335 VEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDS 394
+ F L L + +N D + Y+L+A + H G SP GHY++Y++ S W+ NDS
Sbjct: 262 IGFKESLILSDFMYN-KNQDSQPVYNLFASIVHSGFSPESGHYYAYVKDSIGRWYCCNDS 320
Query: 395 RVTRVEEEFVLSQDAYILFY 414
V+ + VLS+ YILFY
Sbjct: 321 HVSLSSSQDVLSEKVYILFY 340
>gi|50725209|dbj|BAD33960.1| putative ubiquitin-specific protease [Oryza sativa Japonica Group]
gi|222641732|gb|EEE69864.1| hypothetical protein OsJ_29670 [Oryza sativa Japonica Group]
Length = 940
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 112/323 (34%), Positives = 176/323 (54%), Gaps = 21/323 (6%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCD-----------GATEGFCVICA 157
GL NLGN+C+ NA+LQC T PL L H R C+ G+ + +C +C
Sbjct: 383 GLVNLGNSCYANAVLQCLAFTRPLTAYLTEGLHSRNCNLILSQNCVTYHGSKKEWCFMCE 442
Query: 158 LRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKT 217
I L LSP ++ +L I S F ++EDAHEFL+ +D ++S +
Sbjct: 443 FEKLI-LEGRRGKSHLSPTGILSHLRDIGSSFGPGREEDAHEFLRYAIDTMQSASMKEAK 501
Query: 218 KDESLS-SQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE-DVGSLGSALE 275
K+ + +VQ +FGG L SK++C C S+ E ++DL++EI+ D+ +L AL
Sbjct: 502 KNGVYGLPEETTLVQLIFGGYLRSKIKCTMCQGSSEQCERILDLTVEIDGDINTLEEALH 561
Query: 276 SFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHV 335
FT E I D + ++ C +CK +K+L + + P++ LKR+++ G++ KI+K V
Sbjct: 562 RFTSTE-ILDGDNRYNCSRCKSYERAKKKLTISEAPNILTIALKRYQS-GNFG-KINKAV 618
Query: 336 EFPLELDLKPYTSGGQNSDVELKYHLYAIVEH--MGSSPTCGHYFSYIRSSPDTWHRLND 393
F L+L Y S D+ Y LYA+V H + ++ GHY Y++ + WH+++D
Sbjct: 619 RFTEYLNLSNYMSTAD--DISPVYQLYAVVVHHDVMNAAFSGHYVCYVKDTQGKWHKMDD 676
Query: 394 SRVTRVEEEFVLSQDAYILFYAK 416
S+V V E VLS+ AY+LFYA+
Sbjct: 677 SQVKPVSLEKVLSKCAYMLFYAR 699
>gi|297609602|ref|NP_001063411.2| Os09g0464400 [Oryza sativa Japonica Group]
gi|255678959|dbj|BAF25325.2| Os09g0464400 [Oryza sativa Japonica Group]
Length = 918
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 112/323 (34%), Positives = 176/323 (54%), Gaps = 21/323 (6%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCD-----------GATEGFCVICA 157
GL NLGN+C+ NA+LQC T PL L H R C+ G+ + +C +C
Sbjct: 383 GLVNLGNSCYANAVLQCLAFTRPLTAYLTEGLHSRNCNLILSQNCVTYHGSKKEWCFMCE 442
Query: 158 LRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKT 217
I L LSP ++ +L I S F ++EDAHEFL+ +D ++S +
Sbjct: 443 FEKLI-LEGRRGKSHLSPTGILSHLRDIGSSFGPGREEDAHEFLRYAIDTMQSASMKEAK 501
Query: 218 KDESLS-SQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE-DVGSLGSALE 275
K+ + +VQ +FGG L SK++C C S+ E ++DL++EI+ D+ +L AL
Sbjct: 502 KNGVYGLPEETTLVQLIFGGYLRSKIKCTMCQGSSEQCERILDLTVEIDGDINTLEEALH 561
Query: 276 SFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHV 335
FT E I D + ++ C +CK +K+L + + P++ LKR+++ G++ KI+K V
Sbjct: 562 RFTSTE-ILDGDNRYNCSRCKSYERAKKKLTISEAPNILTIALKRYQS-GNFG-KINKAV 618
Query: 336 EFPLELDLKPYTSGGQNSDVELKYHLYAIVEH--MGSSPTCGHYFSYIRSSPDTWHRLND 393
F L+L Y S D+ Y LYA+V H + ++ GHY Y++ + WH+++D
Sbjct: 619 RFTEYLNLSNYMSTAD--DISPVYQLYAVVVHHDVMNAAFSGHYVCYVKDTQGKWHKMDD 676
Query: 394 SRVTRVEEEFVLSQDAYILFYAK 416
S+V V E VLS+ AY+LFYA+
Sbjct: 677 SQVKPVSLEKVLSKCAYMLFYAR 699
>gi|357619275|gb|EHJ71919.1| hypothetical protein KGM_06054 [Danaus plexippus]
Length = 880
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 110/344 (31%), Positives = 173/344 (50%), Gaps = 17/344 (4%)
Query: 85 GSSLLSRPVEKHWPIQIKPTG------VGAGLENLGNTCFINAILQCFTHTLPLVQALRS 138
G L +P +P++ G GAG++N+GNTC++N+ LQ H L S
Sbjct: 95 GDEGLPKPKRVFFPVEKVQLGWQSAWAAGAGMQNVGNTCYLNSTLQALFHVPAFANWLVS 154
Query: 139 -FDHPRPCDGATEGFCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDA 197
H C+ E CVIC +R + + S G + P ++ L I +QEDA
Sbjct: 155 DCTHAEKCN--QEEACVICGMRATLMATQKSGGAAIKPWQVYSKLRLICKHLTPGRQEDA 212
Query: 198 HEFLQCLLDRLESCCLDSKTKDESLS--SQGDNIVQRVFGGCLISKLQCCNCGSCSDTYE 255
HEFL+ L++ +E C L + L S+ + ++ GG L S ++C C S TY+
Sbjct: 213 HEFLRYLVEAMEKCYLSRLINADKLDQYSKETTPLNQILGGYLRSTVRCLACHHLSTTYQ 272
Query: 256 PLIDLSLEIEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAA 315
DL L+I +L AL+SF E++ED + CE C ++VS KQ +++ P V
Sbjct: 273 HFQDLLLDIRKHSTLDEALDSFFSRERLED--LGYKCEACNKKVSATKQFFIERAPMVLC 330
Query: 316 FHLKRFKTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCG 375
LKRF G K+ KHV+F +++L Y +N+ +L Y L ++V H+G S G
Sbjct: 331 IALKRFSLAGG---KLSKHVQFRKKINLNKYIYN-KNNPHQLSYKLVSLVTHLGPSQNSG 386
Query: 376 HYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGT 419
HY + ++ +++ +DS V + VL +AYI+F+ K T
Sbjct: 387 HYTAIGQAPNSNYYQFDDSCVRPIPLSAVLGTNAYIMFFEKDNT 430
>gi|224063313|ref|XP_002301091.1| predicted protein [Populus trichocarpa]
gi|222842817|gb|EEE80364.1| predicted protein [Populus trichocarpa]
Length = 1095
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 111/322 (34%), Positives = 174/322 (54%), Gaps = 16/322 (4%)
Query: 99 IQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICAL 158
++++P GL N GN+C+ NA+LQC T PL H + C + C C
Sbjct: 553 VEMRP----CGLINCGNSCYANAVLQCLAFTPPLTSYFVQGLHSKAC--VKKERCFSCEF 606
Query: 159 RDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKT 217
+ + L LSP ++ L I S ++EDAHEFL+ +D ++S CL +++
Sbjct: 607 -EKVILKAKEGKSPLSPIGILSQLQNIGSQLGNGREEDAHEFLRYAIDAMQSVCLKEARV 665
Query: 218 KDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE-DVGSLGSALES 276
+ ++ FGG L SK++C C S+ E ++DL++EIE D+G L AL
Sbjct: 666 NAVDSFEEEATLIGLTFGGYLRSKIKCMKCHYKSEWQERMMDLTVEIEGDIGKLEDALRR 725
Query: 277 FTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVE 336
FT E I D + K+ C +C+ +K+L + + P+V LKRF++ G + K++K +
Sbjct: 726 FTGTE-ILDGDNKYQCGRCRSYEKAKKKLTILEAPNVLTIALKRFQS-GKFG-KLNKSIR 782
Query: 337 FPLELDLKPYTSGGQNSDVELKYHLYAIVEHMG--SSPTCGHYFSYIRSSPDTWHRLNDS 394
FP LDL PY SG SD Y LY ++ H+ ++ GHY Y+++ + W +++DS
Sbjct: 783 FPEILDLAPYMSG--TSDKSPIYRLYGVIVHLDVMNAAFSGHYVCYVKNIQNKWFKIDDS 840
Query: 395 RVTRVEEEFVLSQDAYILFYAK 416
VT VE E VLS+ AY+L YA+
Sbjct: 841 TVTAVELERVLSKGAYMLLYAR 862
>gi|357148128|ref|XP_003574640.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like
[Brachypodium distachyon]
Length = 970
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 111/317 (35%), Positives = 174/317 (54%), Gaps = 22/317 (6%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGN+C+ NA+LQC T PL H + C + + +C +C L
Sbjct: 453 GLHNLGNSCYANAVLQCLMFTRPLTAYFLGGLHSKNC--SNKEWCFMCEFEK-----LVV 505
Query: 169 SGK----VLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLS- 223
GK LSP ++ +L+ I S F +QEDAHEFL+ +D ++S C+ K +
Sbjct: 506 EGKHGKTALSPTGILSHLHEIGSSFGPGKQEDAHEFLRHSIDAMQSVCMKEARKSGAHRL 565
Query: 224 SQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE-DVGSLGSALESFTKLEK 282
++ +VQ +FGG L SK++C C S+ E ++DL++EI+ D+ SL AL+ FT E
Sbjct: 566 AEETTLVQLIFGGYLRSKIKCTRCHGSSEQSERMLDLTVEIDGDISSLEEALQRFTSTE- 624
Query: 283 IEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELD 342
+ D ++ C +CK +K+L + + P+V LKR+++ G + KI K + FP L+
Sbjct: 625 VLDGNNRYQCTRCKSYERAKKKLTISEAPNVLTIALKRYQS-GKFG-KISKAIRFPETLN 682
Query: 343 LKPYTSGGQ-NSDVELKYHLYAIVEH--MGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRV 399
L Y S NS V Y LY +V H + ++ GHY Y++ + W++ +DS+V V
Sbjct: 683 LSSYMSTTDDNSPV---YSLYGVVVHHDVMNAAFSGHYVCYVKDTHGKWYKTDDSQVKSV 739
Query: 400 EEEFVLSQDAYILFYAK 416
E V+S+ AY+L YA+
Sbjct: 740 SLENVMSKCAYMLLYAR 756
>gi|115464817|ref|NP_001056008.1| Os05g0510300 [Oryza sativa Japonica Group]
gi|113579559|dbj|BAF17922.1| Os05g0510300 [Oryza sativa Japonica Group]
gi|215767681|dbj|BAG99909.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 644
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 107/321 (33%), Positives = 171/321 (53%), Gaps = 20/321 (6%)
Query: 110 LENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGA---TEGFCVICALRDHIELSL 166
L+NLGNTC++N++LQC T PL SF H C + CV C + I L
Sbjct: 25 LKNLGNTCYLNSVLQCLASTPPLATFCLSFRHSNLCKKVLPNKDKECVFCVVERQISRLL 84
Query: 167 AS-SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLD-----------RLESCCLD 214
+ +G + SP K++ L + F+ +QEDAHEFL+ ++D RL + +
Sbjct: 85 RTEAGALDSPAKIIRCLPLFAEHFRWGRQEDAHEFLRYIIDACHTAGLRIRKRLPASNAN 144
Query: 215 SKTKDESLSSQGDNIVQR-VFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSA 273
+E + QG +V + FGG L+S+++C C S+ + ++D+SL++ S+ A
Sbjct: 145 GDAGEEEVRVQGPYMVMKETFGGALLSQVKCLTCKGESNKTDEIMDISLDLPGSNSVADA 204
Query: 274 LESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDK 333
L F + E +E K++CE+CK+ S KQL + + P V LKRF +G KI++
Sbjct: 205 LARFFQPEILEG-SNKYSCERCKKLTSARKQLFVLRAPKVLVIQLKRF--EGINGGKINR 261
Query: 334 HVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLND 393
++EF L L + +N D Y+L+ + H G SP GHY++Y++ + W+ ND
Sbjct: 262 NIEFKETLFLSDFMYN-KNQDSLPVYNLFGSIVHSGFSPDSGHYYAYVKDAIGRWYCCND 320
Query: 394 SRVTRVEEEFVLSQDAYILFY 414
S ++ + VLS+ YILFY
Sbjct: 321 SHISPSSSQDVLSEKVYILFY 341
>gi|170041357|ref|XP_001848432.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167864941|gb|EDS28324.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 1034
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 116/369 (31%), Positives = 186/369 (50%), Gaps = 29/369 (7%)
Query: 54 DKDQNNDDDDDYEEIYRDTRPISSS--YGRYNWGSSLLSRPVEKHWPIQIKPTGVGAGLE 111
D + + DDD + +D P+ Y R N V+ W + GAG+
Sbjct: 87 DVEGEDSDDDGQQSAGKDQLPVPKRVLYARDN---------VQIGWKATGRKWQTGAGMT 137
Query: 112 NLGNTCFINAILQCFTHTLPLVQALRS-FDHPRPCDGAT-EGFCVICALRDHIELSLASS 169
N+GNTC++N+ LQ H + L S H CD + +G C+ICA+ + S + +
Sbjct: 138 NVGNTCYLNSTLQALFHVPAIANWLISDVTHRERCDDSNGQGGCIICAMAKTLLASQSQN 197
Query: 170 GKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL----DSKTKDESLSSQ 225
+ P + L + +QEDAHEFL+ L++ +E L +SK D+ L+ +
Sbjct: 198 QGAIKPYLVYSKLRLVCKHLVLGRQEDAHEFLRYLVEAMEKSYLARFKNSKEFDQ-LTKE 256
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+ Q + GG L S+++C +C S T++ DL L+I S+ AL+ + E++E
Sbjct: 257 TTPLNQ-ILGGYLRSEVKCLSCQHISTTFQHFEDLLLDIRKANSIEDALDVYFARERLE- 314
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E ++ CE CK++V+ KQ L++ P LKRF G KI+KHVE LDL P
Sbjct: 315 -ENQYKCEACKKRVAATKQFSLERAPFALCIQLKRFSMMGG---KINKHVELRNRLDLSP 370
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
Y G+ L Y L ++V H+G++ CGHY + + +++ +DS V + + V
Sbjct: 371 YCKTGK-----LTYRLVSMVTHLGNTQHCGHYTAIGGTESGSYYVFDDSSVRPISMQNVT 425
Query: 406 SQDAYILFY 414
S +AYI+FY
Sbjct: 426 STNAYIIFY 434
>gi|91078882|ref|XP_972954.1| PREDICTED: similar to Ubiquitin-specific protease 36 CG5505-PA
[Tribolium castaneum]
gi|270003709|gb|EFA00157.1| hypothetical protein TcasGA2_TC002978 [Tribolium castaneum]
Length = 739
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 116/364 (31%), Positives = 180/364 (49%), Gaps = 40/364 (10%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRS-FDHPRPCDGATEGFCVICALRDHIEL 164
VGAG+ N+GNTC++N+ LQ H LV L S +H C + G C+ICA+R ++
Sbjct: 109 VGAGMINMGNTCYLNSTLQALFHVPALVNWLISDKEHTAECQDSG-GLCIICAMRKTLQD 167
Query: 165 SLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL---------DS 215
S + + P + + L + +QEDAHEFL+ L++ +E L DS
Sbjct: 168 SQQRNTNTIRPLLIYNKLRLVCRNLIPGRQEDAHEFLRYLVEAMEKSYLSRFKNHSEFDS 227
Query: 216 KTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALE 275
K K+ + +Q + GG L S ++C CG S T++ DL L+I +L ALE
Sbjct: 228 KVKETTPLNQ-------ILGGYLRSAVRCLKCGHVSTTFQHFQDLLLDIRKAQTLDEALE 280
Query: 276 SFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHV 335
+ EK++D + C+ C+++V KQ L++ P V LKRF + KI KH+
Sbjct: 281 GYFSREKLDD--DSYHCQSCQKKVPATKQFSLERAPMVLCIQLKRFSVSNN---KITKHI 335
Query: 336 EFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSR 395
F LDL Y V L Y L A+V HMG + CGHY + ++ +++ +DS
Sbjct: 336 HFRQRLDLTRYAR--HRPSVPLIYRLVALVTHMGPTVNCGHYTAVAQAPSGNFYQFDDSM 393
Query: 396 VTRVEEEFVLSQDAYILFYAKQGTEWVSSLLEAESIGMN----------ADISNSSPKSV 445
V + + V + +AYI+ Y E SS + G N A+ SN++ K+
Sbjct: 394 VRVISHQAVFNTNAYIMLY-----ELESSPFTKSNNGTNNKIKPPLSPEANTSNNTSKAS 448
Query: 446 LDNV 449
L+ +
Sbjct: 449 LNGI 452
>gi|302797124|ref|XP_002980323.1| hypothetical protein SELMODRAFT_420048 [Selaginella moellendorffii]
gi|300151939|gb|EFJ18583.1| hypothetical protein SELMODRAFT_420048 [Selaginella moellendorffii]
Length = 924
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 113/317 (35%), Positives = 176/317 (55%), Gaps = 22/317 (6%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL N GN+CF N ILQC ++T PL L H C +C +C L+DH L + +
Sbjct: 229 GLINCGNSCFANVILQCLSYTRPLAAYLLEGSHRAECR--RNDWCFMCELQDHA-LRVFN 285
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESL--SSQG 226
S SP +++ L I + +QEDAHEF++ +D ++S CLD ++ + SQ
Sbjct: 286 SEVPFSPFRILSRLRDIGNHLGYGRQEDAHEFMRFAVDSMQSICLDQFGGEKQVDSRSQE 345
Query: 227 DNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIED-VGSLGSALESFTKLEKIED 285
++Q +FGG L S+++C CG S+ YE ++DL++EI+ V SL L FT E + D
Sbjct: 346 TTLIQYIFGGHLQSQVKCMQCGHESNRYENMMDLAVEIQGAVESLEDGLAQFTAPEWL-D 404
Query: 286 PETKFTCEKCKEQVSVE----KQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLEL 341
E K+ C++ + ++ K+L + + P++ LKRF++ G + K++K V FP L
Sbjct: 405 GENKYKCDRWCDVWAIPLFSCKRLSVYEAPNILTIALKRFQS-GKF-GKLNKRVTFPEAL 462
Query: 342 DLKPYTSGGQNSDVELKYHLYAIVEH--MGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRV 399
++ PY SG D Y LYA+V H M ++ GHY Y+R TW+ +V V
Sbjct: 463 NISPYMSG--EGDKPPLYRLYAVVVHVDMLNASFFGHYICYVRDMTGTWY-----KVKEV 515
Query: 400 EEEFVLSQDAYILFYAK 416
+ E V+SQ AY+L Y++
Sbjct: 516 DTEKVMSQKAYMLMYSR 532
>gi|218197083|gb|EEC79510.1| hypothetical protein OsI_20578 [Oryza sativa Indica Group]
Length = 644
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 107/321 (33%), Positives = 171/321 (53%), Gaps = 20/321 (6%)
Query: 110 LENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGA---TEGFCVICALRDHIELSL 166
L+NLGNTC++N++LQC T PL SF H C + CV C + I L
Sbjct: 25 LKNLGNTCYLNSVLQCLASTPPLATFCLSFRHSNLCKKVLPNKDKECVFCVVERQISRLL 84
Query: 167 AS-SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLD-----------RLESCCLD 214
+ +G + SP K++ L + F+ +QEDAHEFL+ ++D RL + +
Sbjct: 85 RTEAGALDSPAKIIRCLPLFAEHFRWGRQEDAHEFLRYIIDACHTAGLRIRKRLPASNAN 144
Query: 215 SKTKDESLSSQGDNIVQR-VFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSA 273
+E + QG +V + FGG L+S+++C C S+ + ++D+SL++ S+ A
Sbjct: 145 GDAGEEEVWVQGPCMVMKETFGGALLSQVKCLTCKGESNKTDEIMDISLDLPGSNSVADA 204
Query: 274 LESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDK 333
L F + E +E K++CE+CK+ S KQL + + P V LKRF +G KI++
Sbjct: 205 LARFFQPEILEG-SNKYSCERCKKLTSARKQLFVLRAPKVLVIQLKRF--EGINGGKINR 261
Query: 334 HVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLND 393
++EF L L + +N D Y+L+ + H G SP GHY++Y++ + W+ ND
Sbjct: 262 NIEFKETLFLSDFMYN-KNQDSLPVYNLFGSIVHSGFSPDSGHYYAYVKDAIGRWYCCND 320
Query: 394 SRVTRVEEEFVLSQDAYILFY 414
S ++ + VLS+ YILFY
Sbjct: 321 SHISPSSSQDVLSEKVYILFY 341
>gi|449679016|ref|XP_002157785.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like, partial
[Hydra magnipapillata]
Length = 372
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 99/293 (33%), Positives = 166/293 (56%), Gaps = 10/293 (3%)
Query: 93 VEKHWPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGF 152
VE W K VG GL NLGNTCF+N++LQ T+T PL + S H + C T GF
Sbjct: 88 VENKWKAIQK---VGPGLANLGNTCFLNSVLQVLTYTPPLFNYIMSEYHKQKC--GTVGF 142
Query: 153 CVICALRDHI-ELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESC 211
C+ C L +H ++ ++ + P ++ L +I F+ +QEDAHEFL+ +++ ++
Sbjct: 143 CMQCELTNHFTKVFRGNTNGAIKPMSIIQKLQFIGKSFRFGRQEDAHEFLRYVVEGIQKS 202
Query: 212 CLDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLG 271
K + S + ++ +FGG S+++C C S+T+E ++D++L+++D ++
Sbjct: 203 DYVGKPNLDKFSKE-TSVANAIFGGLYRSQVKCLKCNFDSNTFETMMDINLDVKDCSTVI 261
Query: 272 SALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKI 331
AL+ +++E + K+ CE+C+ + +K+ + K P+V LKRF + KI
Sbjct: 262 QALQRSVCADRLEG-DNKYYCERCRMKTVAQKRNSIYKEPNVLTLQLKRFDFTNMFGGKI 320
Query: 332 DKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSS 384
K+V FP ELD++P+ S QN L Y LYA++ H G S GHY+ Y+++S
Sbjct: 321 SKNVVFPEELDIRPFMSVAQN--YPLLYKLYAVLVHSGFSCNSGHYYCYVKAS 371
>gi|156547946|ref|XP_001604800.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like isoform 1
[Nasonia vitripennis]
Length = 881
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 112/318 (35%), Positives = 167/318 (52%), Gaps = 19/318 (5%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRS-FDHPRPC---DGATEGFCVICALRDH 161
VGAG+ N+GNTC++N+ LQ H LV L S H C DGA E C+ CA+
Sbjct: 123 VGAGMYNVGNTCYLNSTLQALFHVPALVNWLLSDAHHESKCEQNDGAGE--CLTCAVSKT 180
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL--DSKTKD 219
++ S SG+ + P + + L I QQEDAHEFL+ LL+ +E L K
Sbjct: 181 LQFSHQKSGEAIKPFYVYNKLKLICRTMVPGQQEDAHEFLRYLLEGMEKAYLARHKALKL 240
Query: 220 ESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTK 279
+S S + I Q +FGG + ++++C C S T++ DL L+I G+L AL +
Sbjct: 241 DSYSKETTPINQ-IFGGYIRTEVKCLQCKHVSTTFQHFQDLLLDIRKAGTLDEALAGYFS 299
Query: 280 LEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPL 339
E +++ + + CE CK +V KQ +L++ P V LKRF G KI +H+ F
Sbjct: 300 QEHLDNND--YKCEACKRRVPATKQFILERPPKVLCVQLKRFSVLGG---KISRHIGFKQ 354
Query: 340 ELDLKPYTS---GGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRV 396
+D+ PY G Q S +L Y L ++V HMG S CGHY + + S ++ +DS V
Sbjct: 355 TVDMGPYVRRQPGEQPS--KLIYRLASMVTHMGPSVNCGHYTAIAQVSSGKFYSFDDSSV 412
Query: 397 TRVEEEFVLSQDAYILFY 414
+ V+S +AYI+ +
Sbjct: 413 RPISLNNVVSTNAYIMIF 430
>gi|307193249|gb|EFN76140.1| Ubiquitin carboxyl-terminal hydrolase 36 [Harpegnathos saltator]
Length = 874
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 117/355 (32%), Positives = 182/355 (51%), Gaps = 25/355 (7%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRP----CDGATEGFCVICALRDH 161
VGAG+ N+GNTC++N+ LQ H LV L S H DG+TE C+ CA+
Sbjct: 122 VGAGMLNIGNTCYLNSTLQALFHVPALVNWLLSDPHHNSKYEQSDGSTE--CLTCAVAKT 179
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLD--SKTKD 219
++ S SG + P + + L I QQEDAHEFL+ LL+ +E L TK
Sbjct: 180 LQFSHLKSGGAIKPFHIYNKLKSICRTMMHGQQEDAHEFLRYLLEGMERAYLTRHKATKL 239
Query: 220 ESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTK 279
+S S + I Q +FGG + ++++C C S T++ DL ++I +L AL +
Sbjct: 240 DSYSKETTPINQ-IFGGYIRTEVKCLQCQHVSTTFQHFQDLLVDIRKANTLDEALNGYFS 298
Query: 280 LEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPL 339
E++++ + + CE CK +V KQ L++ P V LKRF G KI +H+ F
Sbjct: 299 REQLDNND--YKCEACKRRVPATKQFTLERPPKVLCVQLKRFSVGGG---KISRHIGFKQ 353
Query: 340 ELDLKPY--TSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVT 397
+D+ Y G+ S +L Y L ++V HMG S CGHY + + S ++ +D+ V
Sbjct: 354 TIDMSRYLWREPGE-SPKQLTYKLMSVVTHMGPSVNCGHYTAIAQVSSGQYYTFDDACVR 412
Query: 398 RVEEEFVLSQDAYILFY------AKQGTEWVSSLLEAESIGMNADISNSSPKSVL 446
+ VLS +AYI+ + Q T V+ A+S+ + + +S+ KSV+
Sbjct: 413 PISLNNVLSTNAYIMIFEMNSSSQNQQTAKVNGTTSAKSV--STPLPSSTNKSVV 465
>gi|328777507|ref|XP_001120426.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like [Apis
mellifera]
Length = 884
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 119/365 (32%), Positives = 181/365 (49%), Gaps = 33/365 (9%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRS-FDHPRPC---DGATEGFCVICALRDH 161
VGAG+ N+GNTC++N+ LQ H LV L S H C DG E C+ CA+
Sbjct: 122 VGAGMYNVGNTCYLNSTLQALFHVPALVNWLLSDSHHTSKCEQNDGGGE--CLTCAVAKT 179
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES 221
++ S SG + P + + L I QQEDAHEFL+ LL+ +E L ++ K
Sbjct: 180 LQFSHQKSGCAIKPFYIYNKLKLICRTMVPGQQEDAHEFLRYLLEGMEKAYL-ARHKASK 238
Query: 222 LSSQGDNI--VQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTK 279
L S + ++FGG + ++++C C S T++ DL ++I +L AL S+
Sbjct: 239 LDSYSKETTPINQIFGGYIRTEVKCLQCRHVSTTFQHFQDLLVDIRKASTLDEALSSYFS 298
Query: 280 LEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPL 339
E++++ + + CE CK +V KQ L++ P V LKRF G KI KH+ F
Sbjct: 299 REQLDNND--YKCEACKRRVPATKQFSLERPPKVLCVQLKRFSVLGG---KISKHIGFKQ 353
Query: 340 ELDLKPY--TSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVT 397
+D+ PY G++S L Y L +IV HMG S CGHY + + S ++ +DS V
Sbjct: 354 TIDMGPYLWKEPGESSQ-SLTYKLMSIVTHMGPSVNCGHYTAVAKVSTGQYYSFDDSCVR 412
Query: 398 RVEEEFVLSQDAYILFYAKQ----------------GTEWVSSLLEAESIGMNADISNSS 441
+ VLS +AYI+ + + GT V++ L + MN +I+ +
Sbjct: 413 PLSLSNVLSTNAYIMIFEMEQQTQSQIQAQQTLKLNGTMTVNNTLSSSGSSMNKNIAPKA 472
Query: 442 PKSVL 446
S L
Sbjct: 473 STSGL 477
>gi|215736860|dbj|BAG95789.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 750
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 85/213 (39%), Positives = 133/213 (62%), Gaps = 3/213 (1%)
Query: 204 LLDRLESCCLDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE 263
LL+ + CCL S ES S+ ++V ++FGG L S+++C C CS+ ++P +DLSL+
Sbjct: 4 LLESMHKCCLPSGVPSESPSAYEKSLVHKIFGGRLRSQVKCTQCSHCSNKFDPFLDLSLD 63
Query: 264 IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKT 323
I SL AL++FT E ++ E ++ C++C+++V +K+ +DK P V HLKRF +
Sbjct: 64 IGKATSLVRALQNFTAEELLDGGEKQYQCQRCRKKVVAKKKFTIDKAPYVLTIHLKRF-S 122
Query: 324 DGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRS 383
+ KIDK V+F LDLKP+ S + +D KY LY ++ H G + GHY+ ++R+
Sbjct: 123 PFNPREKIDKKVDFQPMLDLKPFISDSKGAD--FKYSLYGVLVHAGWNTQSGHYYCFVRT 180
Query: 384 SPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAK 416
S WH L+D++V +V E VL Q AY+LFY +
Sbjct: 181 SSGMWHNLDDNQVRQVREADVLRQKAYMLFYVR 213
>gi|356525831|ref|XP_003531525.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 25-like [Glycine
max]
Length = 641
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 115/354 (32%), Positives = 182/354 (51%), Gaps = 24/354 (6%)
Query: 81 RYNWGSSLLSRPVEKHWPIQIKPTGVGA--GLENLGNTCFINAILQCFTHTLPLVQALRS 138
+ W SLLS Q + TG G GL NLGN+C++N++LQC T+T PL
Sbjct: 4 QMTWQPSLLS---------QKRKTGTGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLR 54
Query: 139 FDHPRPCDGATEGFCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAH 198
H ++ C C L I SL +P K+ + + F+ +QEDAH
Sbjct: 55 LQHSSL-CDSSGSSCPFCILEKQIARSLRLDLTHDAPSKIQSCIRIFAENFRCGRQEDAH 113
Query: 199 EFLQCLLDRLESCCLDSKT---KDESLSSQGD-----NIVQRVFGGCLISKLQCCNCGSC 250
EFL+ ++D + CL K K + GD +V+ +FGG L S+++C CG
Sbjct: 114 EFLRYVIDACHNTCLRLKKLRRKGAEANGGGDEAGGSTVVKEIFGGALQSQVKCLCCGYE 173
Query: 251 SDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKV 310
S+ + ++D+SL++ SL +++ F + E + D K+ C+ CK+ V+ +KQ+ + +
Sbjct: 174 SNKVDEIMDISLDVFHSNSLKDSMQKFFQPE-VLDGNNKYKCDSCKKLVAAKKQMSILQA 232
Query: 311 PSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGS 370
P++ LKRF +G KIDK V F L L + + D + +Y L+ + H G
Sbjct: 233 PNILVIQLKRF--EGILGGKIDKAVAFEEVLVLSSFMCKA-SQDPQPEYKLFGTIVHSGY 289
Query: 371 SPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEWVSS 424
SP GHY++YI+ + W+ +DS VT + VLS+ YILF+++ VSS
Sbjct: 290 SPESGHYYAYIKDAMGRWYCCDDSCVTVATLQEVLSEKVYILFFSRTNQRPVSS 343
>gi|125561915|gb|EAZ07363.1| hypothetical protein OsI_29613 [Oryza sativa Indica Group]
Length = 978
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 105/312 (33%), Positives = 175/312 (56%), Gaps = 11/312 (3%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGN+C+ NA+LQC T PL L H + C + + +C +C +
Sbjct: 451 GLHNLGNSCYANAVLQCLMFTRPLTSYLLGGLHSKNC--SKKEWCFMCEFEKLV--GEGR 506
Query: 169 SGKV-LSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLS-SQG 226
GK+ LSP ++ +L I S F +QEDAHEFL+ +D ++S C+ K + +
Sbjct: 507 QGKIALSPTGILSHLPDIGSSFGPGKQEDAHEFLRYAIDAMQSVCMKEARKSGTHRLHEE 566
Query: 227 DNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE-DVGSLGSALESFTKLEKIED 285
++Q +FGG L SK++C C + S+ +E ++DL++EI+ D+ SL ALE FT E + D
Sbjct: 567 TTLMQLIFGGYLRSKIRCTRCDATSEQHERILDLTVEIDGDISSLEGALERFTSTE-VLD 625
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
+ K+ C +CK +K+L + + P+V LKR+++ G + KI+K + FP L+L+
Sbjct: 626 GDNKYKCSRCKSHERAKKKLTISEAPNVLTIALKRYQS-GKF-GKINKAIRFPETLNLQR 683
Query: 346 YTS-GGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFV 404
Y S ++ L+ + + ++ GHY Y++ + W++ +DS+V V E V
Sbjct: 684 YMSPKADDTSPGLQPVCSGVHHDIMNAAFSGHYVCYVKDTHGKWYKTDDSQVKPVSLENV 743
Query: 405 LSQDAYILFYAK 416
+S+ AY+L YA+
Sbjct: 744 MSKCAYMLLYAR 755
>gi|345485737|ref|XP_003425327.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like isoform 2
[Nasonia vitripennis]
Length = 888
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 112/325 (34%), Positives = 167/325 (51%), Gaps = 26/325 (8%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRS-FDHPRPC----------DGATEGFCV 154
VGAG+ N+GNTC++N+ LQ H LV L S H C DGA E C+
Sbjct: 123 VGAGMYNVGNTCYLNSTLQALFHVPALVNWLLSDAHHESKCEQNVRHHYFSDGAGE--CL 180
Query: 155 ICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL- 213
CA+ ++ S SG+ + P + + L I QQEDAHEFL+ LL+ +E L
Sbjct: 181 TCAVSKTLQFSHQKSGEAIKPFYVYNKLKLICRTMVPGQQEDAHEFLRYLLEGMEKAYLA 240
Query: 214 -DSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGS 272
K +S S + I Q +FGG + ++++C C S T++ DL L+I G+L
Sbjct: 241 RHKALKLDSYSKETTPINQ-IFGGYIRTEVKCLQCKHVSTTFQHFQDLLLDIRKAGTLDE 299
Query: 273 ALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKID 332
AL + E +++ + + CE CK +V KQ +L++ P V LKRF G KI
Sbjct: 300 ALAGYFSQEHLDNND--YKCEACKRRVPATKQFILERPPKVLCVQLKRFSVLGG---KIS 354
Query: 333 KHVEFPLELDLKPYTS---GGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWH 389
+H+ F +D+ PY G Q S +L Y L ++V HMG S CGHY + + S ++
Sbjct: 355 RHIGFKQTVDMGPYVRRQPGEQPS--KLIYRLASMVTHMGPSVNCGHYTAIAQVSSGKFY 412
Query: 390 RLNDSRVTRVEEEFVLSQDAYILFY 414
+DS V + V+S +AYI+ +
Sbjct: 413 SFDDSSVRPISLNNVVSTNAYIMIF 437
>gi|383858607|ref|XP_003704791.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like [Megachile
rotundata]
Length = 880
Score = 175 bits (444), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 118/365 (32%), Positives = 185/365 (50%), Gaps = 20/365 (5%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRS-FDHPRPC---DGATEGFCVICALRDH 161
VGAG+ N+GNTC++N+ LQ H LV L S H C DG G C+ CA+
Sbjct: 122 VGAGMYNVGNTCYLNSTLQALFHIPALVNWLLSDSHHTSKCEQNDGG--GECLTCAVAKT 179
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLD--SKTKD 219
++ S SG + P + + L I QQEDAHEFL+ LL+ +E L +K
Sbjct: 180 LQFSHQKSGCAIKPFYIYNKLKLICRTMVPGQQEDAHEFLRYLLEGMEKAYLTRHKASKL 239
Query: 220 ESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTK 279
+S S + I Q +FGG + ++++C C S T++ DL ++I +L AL S+
Sbjct: 240 DSYSKETTPINQ-IFGGYIRTEVKCLQCRHVSTTFQHFQDLLVDIRKASTLDEALTSYFS 298
Query: 280 LEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPL 339
E++++ + + CE CK++V KQ L++ P V LKRF G KI KH+ F
Sbjct: 299 REQLDNND--YKCEACKKRVPATKQFSLERPPKVLCVQLKRFSVLGG---KISKHIGFKQ 353
Query: 340 ELDLKPYTSGGQNSDVE-LKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTR 398
+D+ PY ++ L Y L +IV HMG S CGHY + + S ++ +DS V
Sbjct: 354 SIDMGPYLWREPGEPIQPLTYKLMSIVTHMGPSVNCGHYTAVAKVSTGQYYSFDDSCVRP 413
Query: 399 VEEEFVLSQDAYILFYAKQGTEWVSSLLEAESIGMNADISN----SSPKSVLDNVENDYT 454
+ +LS +AYI+ + + + S + +++ +N ++ SSP S +
Sbjct: 414 ISLSNMLSTNAYIMIFEME-QQTPSQVQTQQTVKLNGTVTVNNTISSPGSPKNKTVTPKP 472
Query: 455 SRSGV 459
S SG+
Sbjct: 473 STSGI 477
>gi|345485740|ref|XP_003425328.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like isoform 3
[Nasonia vitripennis]
Length = 895
Score = 175 bits (444), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 112/325 (34%), Positives = 167/325 (51%), Gaps = 26/325 (8%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRS-FDHPRPC----------DGATEGFCV 154
VGAG+ N+GNTC++N+ LQ H LV L S H C DGA E C+
Sbjct: 123 VGAGMYNVGNTCYLNSTLQALFHVPALVNWLLSDAHHESKCEQNVRHHYFSDGAGE--CL 180
Query: 155 ICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL- 213
CA+ ++ S SG+ + P + + L I QQEDAHEFL+ LL+ +E L
Sbjct: 181 TCAVSKTLQFSHQKSGEAIKPFYVYNKLKLICRTMVPGQQEDAHEFLRYLLEGMEKAYLA 240
Query: 214 -DSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGS 272
K +S S + I Q +FGG + ++++C C S T++ DL L+I G+L
Sbjct: 241 RHKALKLDSYSKETTPINQ-IFGGYIRTEVKCLQCKHVSTTFQHFQDLLLDIRKAGTLDE 299
Query: 273 ALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKID 332
AL + E +++ + + CE CK +V KQ +L++ P V LKRF G KI
Sbjct: 300 ALAGYFSQEHLDNND--YKCEACKRRVPATKQFILERPPKVLCVQLKRFSVLGG---KIS 354
Query: 333 KHVEFPLELDLKPYTS---GGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWH 389
+H+ F +D+ PY G Q S +L Y L ++V HMG S CGHY + + S ++
Sbjct: 355 RHIGFKQTVDMGPYVRRQPGEQPS--KLIYRLASMVTHMGPSVNCGHYTAIAQVSSGKFY 412
Query: 390 RLNDSRVTRVEEEFVLSQDAYILFY 414
+DS V + V+S +AYI+ +
Sbjct: 413 SFDDSSVRPISLNNVVSTNAYIMIF 437
>gi|357451869|ref|XP_003596211.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
gi|355485259|gb|AES66462.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
Length = 983
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 117/347 (33%), Positives = 174/347 (50%), Gaps = 46/347 (13%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL N GN+C+ NA+LQC T T PLV L H C + +C++C L H+ + L
Sbjct: 465 GLLNCGNSCYANAVLQCLTSTKPLVVYLLYGSHSESC--CAKDWCLMCELEQHMMI-LRE 521
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSS--QG 226
G LSP +++ ++ I+ QEDAHEFL+ L+ ++S CL+ + + Q
Sbjct: 522 IGAPLSPSRILWHMRSINCNMGDGSQEDAHEFLRLLVASMQSICLEGLGGERKVDPRLQE 581
Query: 227 DNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIED-VGSLGSALESFTKLEKIED 285
+Q FGG L SK++C NC S+ YE ++DL+LEI V SL AL FT E + D
Sbjct: 582 TTFIQHTFGGRLQSKVKCLNCSHESERYENIMDLTLEILGWVESLEDALTQFTSPEDL-D 640
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKT---------------------- 323
E + C +C V KQL + + P++ LKRF+
Sbjct: 641 GENMYRCGRCTAYVRARKQLSIHEAPNILTIVLKRFQIPNNVLNFIIFFILTLRNISCFV 700
Query: 324 ----DGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGS--SPTCGHY 377
+G Y KI+K + FP LD+ P+ +G D+ Y LYA+V H+ + + GHY
Sbjct: 701 LCHQEGRYG-KINKCITFPEMLDMIPFMTG--TGDIPPLYVLYAVVVHLDTLNASFSGHY 757
Query: 378 FSYIRSSPDTWHRLNDS--------RVTRVEEEFVLSQDAYILFYAK 416
SY++ W R++D+ +V V V+S+ AYILFY +
Sbjct: 758 VSYVKDLQGNWFRIDDTEVMLLPCLQVQPVLVNQVMSEGAYILFYTR 804
>gi|380012929|ref|XP_003690525.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like [Apis
florea]
Length = 884
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 112/317 (35%), Positives = 165/317 (52%), Gaps = 17/317 (5%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRS-FDHPRPC---DGATEGFCVICALRDH 161
VGAG+ N+GNTC++N+ LQ H LV L S H C DG E C+ CA+
Sbjct: 122 VGAGMYNVGNTCYLNSTLQALFHVPALVNWLLSDSHHTSKCEQNDGGGE--CLTCAVAKT 179
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL--DSKTKD 219
++ S SG + P + + L I QQEDAHEFL+ LL+ +E L +K
Sbjct: 180 LQFSHQKSGCAIKPFYIYNKLKLICRTMVPGQQEDAHEFLRYLLEGMEKAYLARHKASKL 239
Query: 220 ESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTK 279
+S S + I Q +FGG + ++++C C S T++ DL ++I +L AL S+
Sbjct: 240 DSYSKETTPINQ-IFGGYIRTEVKCLQCRHVSTTFQHFQDLLVDIRKASTLDEALSSYFS 298
Query: 280 LEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPL 339
E++++ + + CE CK +V KQ L++ P V LKRF G KI KH+ F
Sbjct: 299 REQLDNND--YKCEACKRRVPATKQFSLERPPKVLCVQLKRFSVLGG---KISKHIGFKQ 353
Query: 340 ELDLKPY--TSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVT 397
+D+ PY G+ S L Y L +IV HMG S CGHY + + S ++ +DS V
Sbjct: 354 TIDMGPYLWKEPGEPSQ-SLTYKLMSIVTHMGPSVNCGHYTAVAKVSTGQYYSFDDSCVR 412
Query: 398 RVEEEFVLSQDAYILFY 414
+ VLS +AYI+ +
Sbjct: 413 PLSLSNVLSTNAYIMIF 429
>gi|402912939|ref|XP_003918993.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like, partial [Papio anubis]
Length = 340
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 99/282 (35%), Positives = 157/282 (55%), Gaps = 16/282 (5%)
Query: 102 KPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDH 161
+P VGAGL+N+GNTC++NA LQC T+T PL + S +H + C C++C + H
Sbjct: 74 RPAAVGAGLQNMGNTCYMNASLQCLTYTPPLANYMLSQEHSQLCH--RHKCCMLCTMEAH 131
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES 221
I +L G V+ P + +++ F R +QEDAHEF ++D ++ CL K
Sbjct: 132 ITRALHCPGHVIQPSQA------LAAGFHRGKQEDAHEFPMFIVDAMKKACLPGH-KQVD 184
Query: 222 LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLE 281
S+ ++ ++FGGC S+++C +C SDT++P +D++L+I+ S+ ALE K E
Sbjct: 185 HDSEDTTLIHQIFGGCWRSQIKCLHCQGVSDTFDPYLDIALDIQAAQSVKQALEQVVKPE 244
Query: 282 KIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK-TDGSYVVKIDKHVEFPLE 340
++ + E + C C ++ K L V LKRF G+ K+ K+V++P
Sbjct: 245 EL-NGENAYHCGLCLQKAPASKTFTLHTSAKVLILVLKRFSDVTGN---KLAKNVQYPEC 300
Query: 341 LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIR 382
LD++PY S Q + L Y LYA++ H G S GHY SY++
Sbjct: 301 LDIQPYMS--QQNTGPLVYVLYAVLVHAGWSCHNGHYLSYVK 340
>gi|313234636|emb|CBY10591.1| unnamed protein product [Oikopleura dioica]
Length = 482
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 112/328 (34%), Positives = 177/328 (53%), Gaps = 20/328 (6%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL N GNTCF+N ++Q TH+ L HPR C + C++C + ++
Sbjct: 160 GLVNQGNTCFMNVVIQALTHSPVLRDYFLMEKHPR-CSPSEISSCIVCEFSQIFQEFFSN 218
Query: 169 -SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGD 227
+ ++P +L+ + S + Y+Q+DAHEFL +LD + L + + S+ G
Sbjct: 219 ENSNPMTPYRLLLLVWRNSEYLAGYEQQDAHEFLIAVLDMIHER-LQPRIEGGSIDLTGH 277
Query: 228 ---NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDV--GSLGSALESFTKLEK 282
+I+ +VF G + S + C CG+ S T +PL D+SL+I V SL L FTK E+
Sbjct: 278 AERSIIDQVFTGYMQSNVVCNQCGNISQTIDPLRDISLDIPQVPSASLMDCLSKFTKKEQ 337
Query: 283 IEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRF-KTDGSYVVKIDKHVEFPLEL 341
+ + +K C+KC ++ KQL + ++P VA HLKRF +T K+ V FP L
Sbjct: 338 LGNA-SKINCKKCGKRQESSKQLTISRLPVVACLHLKRFEQTATGSRSKVATPVSFPKTL 396
Query: 342 DLKPYTSGGQNSDV--------ELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLND 393
D+ P+ S +N+ + KY L+A+V HMG+ + GHY S+IR + +W R +D
Sbjct: 397 DMGPFMSSARNTSLSPEFCDSAHYKYELFAVVNHMGNLQS-GHYTSFIRQT-SSWFRCDD 454
Query: 394 SRVTRVEEEFVLSQDAYILFYAKQGTEW 421
S +T+ E VL+ +AY+LFY K+ +
Sbjct: 455 SLITKASIEQVLNSEAYLLFYHKKSIRF 482
>gi|67594014|ref|XP_665769.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54656592|gb|EAL35536.1| hypothetical protein Chro.80498, partial [Cryptosporidium hominis]
Length = 671
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 118/386 (30%), Positives = 199/386 (51%), Gaps = 34/386 (8%)
Query: 100 QIKPTGVGAGLENLG-NTCFINAILQCFTHTLPL-VQALRSFDHPRPCDGATEGF-CVIC 156
Q +P G GL N G NTC+ N+ILQ T+ L + LR +H + C E C++C
Sbjct: 103 QFRP--YGRGLANPGWNTCYFNSILQALTYAPYLSIDCLRR-NHQKICKHMKEHLVCIMC 159
Query: 157 ALRDHIELSLASSGKVLSPRKLVDNLNYISSF--------FQRYQ---QEDAHEFLQCLL 205
DH+ + L ++ K + ++ +SSF ++R++ DA EFL+ L
Sbjct: 160 MFEDHVNIMLDNTSK----SNIKNDQPVVSSFIKCAQKLIWKRFRIGMMHDAQEFLRYFL 215
Query: 206 DRLESCCLDSKTK-DESLS-----SQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLID 259
+ L CL + D++ + + ++F G +S++ C NC S+TY+P +D
Sbjct: 216 EALHKSCLPKNLQTDQTFRKIHPIAASTTYIGQLFCGFFLSRIVCHNCQYTSNTYDPFMD 275
Query: 260 LSLEIEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLK 319
+ L+I V +L +AL+ FTK+E ++ E ++ C KC ++ KQL+++K+P + LK
Sbjct: 276 VPLDIMGVSNLENALKLFTKIEYLKG-ENRYMCPKCNQRSDASKQLLIEKLPPLLTIQLK 334
Query: 320 RFKTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFS 379
RF G K +K + F LDL+PY S S+ Y L+A+V H G++ +CGHY++
Sbjct: 335 RFSYVGHGSRKPNKAINFSDVLDLQPYISSKTYSESSYIYKLWAVVCHSGNTLSCGHYYT 394
Query: 380 YIRSSPDTWHRLNDSRV--TRVEEEFVLSQDAYILFYAKQGTEWVSSL----LEAESIGM 433
+ +S + W+ ND V TR+E + AY+LFY + L + ES+
Sbjct: 395 HAKSIDNKWYCFNDDYVKPTRIENVLNENHKAYLLFYYRSDFNKYDLLKDSGVSIESLEK 454
Query: 434 NADISNSSPKSVLDNVENDYTSRSGV 459
+ I+ +P+ N++ S+S V
Sbjct: 455 SQIITPLAPEISFINLQLKSNSKSSV 480
>gi|226506140|ref|NP_001147905.1| UBP25 [Zea mays]
gi|195614492|gb|ACG29076.1| UBP25 [Zea mays]
Length = 644
Score = 173 bits (439), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 117/367 (31%), Positives = 185/367 (50%), Gaps = 26/367 (7%)
Query: 98 PIQIKP-TGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGAT---EGFC 153
P Q +P TG GL+NL NTC++N +LQC T PL + H C + + C
Sbjct: 11 PPQRRPRTGPPPGLKNLSNTCYLNCVLQCLASTPPLATFCLASGHSDICKKVSPNRDKEC 70
Query: 154 VICALRDHI-ELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCC 212
C L I L A +G + SP K++ + + F+ +QEDAHEFL+ ++D +
Sbjct: 71 AFCVLERQIARLLRADAGALDSPAKVIRCMPLFAEHFRWGRQEDAHEFLRYVVDACHTAG 130
Query: 213 LDSKTK----------DESLSSQGDNIVQR-VFGGCLISKLQCCNCGSCSDTYEPLIDLS 261
L ++ E QG +V R FGG L+S+++C C S+ + ++D+S
Sbjct: 131 LRTRKLLLAKGANGNCGEDGRGQGACLVMRETFGGALLSQVKCLVCNRESNKTDEIMDIS 190
Query: 262 LEIEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRF 321
L++ S+ AL F K E +E K++CE+CK S +KQ+ + + P V LKRF
Sbjct: 191 LDLPGSSSVADALARFFKPEILEG-ANKYSCERCKTLTSAQKQMFMLRAPKVLVIQLKRF 249
Query: 322 KTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYI 381
+G KI++++EF L + ++ D + Y+L+ + H G SP GHY++Y+
Sbjct: 250 --EGINGGKINRNIEFKETLGISDCMYN-KSQDPQPVYNLFGCIVHSGLSPESGHYYAYV 306
Query: 382 RSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFY-----AKQGTEWVSSLLEAESIGMNA- 435
+ W NDS V+ + VLS+ YILFY ++ + S A+ N
Sbjct: 307 KDPSGQWFCCNDSHVSLSSSQNVLSEKVYILFYILNSKTQKSSTNGYSFTAAKPFSTNVI 366
Query: 436 DISNSSP 442
DIS++SP
Sbjct: 367 DISSTSP 373
>gi|426358875|ref|XP_004046715.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
6-like [Gorilla gorilla gorilla]
Length = 346
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 99/283 (34%), Positives = 158/283 (55%), Gaps = 16/283 (5%)
Query: 102 KPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDH 161
+P VGAGL+N+GNTC++NA LQC T+T PL + S +H + C C++C ++ H
Sbjct: 74 RPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCH--RHKGCMLCTMQAH 131
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES 221
I +L G V+ P + +++ F +QEDAHEFL +D ++ CL K
Sbjct: 132 ITRALYRPGHVIQPSQA------LAAGFHIGKQEDAHEFLMFTVDAMKKACLPGH-KQVD 184
Query: 222 LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLE 281
S+ ++ ++FGG S+++C +C SDT++P +D++L+I+ S+ ALE K E
Sbjct: 185 HHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVKQALEQLVKPE 244
Query: 282 KIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK-TDGSYVVKIDKHVEFPLE 340
++ + E + C C ++ K L L V LKRF G+ K+ K+V++P
Sbjct: 245 EL-NGENAYHCGLCLQKAPASKTLTLHTSAKVLILVLKRFSDVTGN---KLAKNVQYPEC 300
Query: 341 LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRS 383
LD++PY S Q + L Y LYA++ H G S GHY SY+++
Sbjct: 301 LDMQPYMS--QQNTGPLVYVLYAVLVHAGWSCHNGHYLSYVKA 341
>gi|344239651|gb|EGV95754.1| Ubiquitin carboxyl-terminal hydrolase 42 [Cricetulus griseus]
Length = 838
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 92/241 (38%), Positives = 144/241 (59%), Gaps = 10/241 (4%)
Query: 178 LVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDNIVQRVFGGC 237
+++ + I+ F+ QEDAHEFLQ +D ++ CL+ K + +Q +V ++FGG
Sbjct: 3 VINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDR-HTQATTLVCQIFGGY 61
Query: 238 LISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIEDPETKFTCEKCKE 297
L S+++C NC SDT++P +D++LEI+ S+ ALE F K E++ D E + C KCK+
Sbjct: 62 LRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVTKALEQFVKPEQL-DGENSYKCSKCKK 120
Query: 298 QVSVEKQLMLDKVPSVAAFHLKRFK--TDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV 355
V K+ + + +V LKRF T G KI K V++P LD++PY S Q +
Sbjct: 121 MVPASKRFTIHRSSNVLTISLKRFANFTGG----KIAKDVKYPEYLDIRPYMS--QPNGE 174
Query: 356 ELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYA 415
+ Y LYA++ H G + GHYF YI++S W+++NDS V+ + VL+Q AY+LFY
Sbjct: 175 PIIYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLNQQAYVLFYI 234
Query: 416 K 416
+
Sbjct: 235 R 235
>gi|356556930|ref|XP_003546773.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 25-like [Glycine
max]
Length = 652
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 114/364 (31%), Positives = 183/364 (50%), Gaps = 25/364 (6%)
Query: 81 RYNWGSSLLSRPVEKHWPIQIKPTGVGA--GLENLGNTCFINAILQCFTHTLPLVQALRS 138
+ W SLLS Q + TG G GL NLGN+C++N++LQC T+T PL
Sbjct: 4 QMTWQPSLLS---------QKRKTGTGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLR 54
Query: 139 FDHPRPCDGATEGFCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAH 198
H ++ C C L I SL +P K+ + + F+ +QEDAH
Sbjct: 55 LQHSSL-CDSSASSCPFCILEKQIARSLRLDLTYDAPSKIQSCIRIFAENFRCGRQEDAH 113
Query: 199 EFLQCLLDRLESCCLDSK---------TKDESLSSQGDNIVQRVFGGCLISKLQCCNCGS 249
EFL+ ++D + CL K + G +V+ +FGG L S+++C CG
Sbjct: 114 EFLRYVIDACHNTCLRLKKLRRKGAEANGGGGGDTGGGTVVKEIFGGALQSQVKCLCCGY 173
Query: 250 CSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDK 309
S+ + ++D+SL++ SL +++ F + E + D K+ C+ CK+ V+ +KQ+ + +
Sbjct: 174 ESNKVDEIMDISLDVFHSNSLKDSMQKFFQPE-VLDGNNKYKCDSCKKLVAAKKQMSILQ 232
Query: 310 VPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMG 369
P++ LKRF +G KIDK V F L L + + D + +Y L+ + H G
Sbjct: 233 APNILVIQLKRF--EGILGGKIDKAVAFEEVLVLSSFMCKA-SQDPQPEYKLFGTIVHSG 289
Query: 370 SSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEWVSSLLEAE 429
SP GHY++YI+ + W+ +DS VT + VLS+ YILF+++ V+S
Sbjct: 290 YSPESGHYYAYIKDAMGRWYCCDDSCVTVATLQEVLSEKVYILFFSRTNQRPVASCNSLA 349
Query: 430 SIGM 433
S G+
Sbjct: 350 SNGV 353
>gi|224088268|ref|XP_002308398.1| predicted protein [Populus trichocarpa]
gi|222854374|gb|EEE91921.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 83/213 (38%), Positives = 127/213 (59%), Gaps = 3/213 (1%)
Query: 204 LLDRLESCCLDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE 263
LL+ + CCL S ES ++ ++V ++FGG L S+++C C CS+ ++P +DLSLE
Sbjct: 4 LLESMHKCCLPSGVPSESPAAYETSLVHKIFGGSLCSQVECQQCSYCSNKFDPFLDLSLE 63
Query: 264 IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKT 323
I +L + L +FT + ++ E + C++CK++V +K L + K P V HLKRF
Sbjct: 64 IAKADTLPALLRNFTAADMLDGGEKHYQCQRCKQKVRAKKWLTVHKAPHVLTIHLKRFHA 123
Query: 324 DGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRS 383
K+D+ V F LD+KP+ SG D LKY LY ++ H G + GHY ++R+
Sbjct: 124 HDPG-RKVDRKVIFDRSLDMKPFVSGSYEGD--LKYSLYGVLVHYGHNTHSGHYVCFVRT 180
Query: 384 SPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAK 416
S WH LND++V +V E+ VL Q AY+LFY +
Sbjct: 181 SSGIWHLLNDNQVRQVSEKAVLEQKAYMLFYVR 213
>gi|321249377|ref|XP_003191439.1| hypothetical protein CGB_A4490C [Cryptococcus gattii WM276]
gi|317457906|gb|ADV19652.1| conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 643
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 106/329 (32%), Positives = 167/329 (50%), Gaps = 13/329 (3%)
Query: 97 WPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVIC 156
WP I AGL N C+ NA LQ HT P+++ + D + FC++C
Sbjct: 136 WPETIATAKRAAGLHNPSMACYANATLQILLHTPPVLRIALTHDEGNCLQIKKKNFCMLC 195
Query: 157 ALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSK 216
+L+ E S S K +P + +L+ I F + +QED HEF + + D L++ L
Sbjct: 196 SLKHMAEGSHWSGRKAYAP-GIHRHLSQIKKGFSKNRQEDTHEFFRFVTDALQNTALAKL 254
Query: 217 TKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVG--SLGSAL 274
KD + + V RV+GG + S++ C C + SDT++ +DLSL++ G S+ L
Sbjct: 255 PKDTPEKIKHTSWVYRVWGGRVRSRVVCSRCNNPSDTFDSFLDLSLDVNKQGKKSVLGML 314
Query: 275 ESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTD------GSYV 328
FTK +K+E + K+ CEKCK + + K +D+ P V HLKRF + +
Sbjct: 315 AGFTKEDKLEG-DNKYHCEKCKCKANATKSFKVDQAPPVLTLHLKRFSVNYNPYSGRARA 373
Query: 329 VKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTW 388
K ++ ++F LD+ PY ++ KY L+ + H G+ GHY SY+RS W
Sbjct: 374 EKFNQPIKFEQNLDMAPYMVDPKSPGS--KYRLFGVTCHRGTELRFGHYTSYVRSPSGQW 431
Query: 389 HRLNDSRVTRVEEEFVLS-QDAYILFYAK 416
+D V+ V+ E VL+ + AY+L Y +
Sbjct: 432 FHADDDDVSPVQLEQVLNDKTAYLLSYIR 460
>gi|224084576|ref|XP_002307344.1| predicted protein [Populus trichocarpa]
gi|222856793|gb|EEE94340.1| predicted protein [Populus trichocarpa]
Length = 325
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 111/312 (35%), Positives = 168/312 (53%), Gaps = 12/312 (3%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL N GN+C+ NA+LQC T PL H + C C C + I L
Sbjct: 22 GLINCGNSCYANAVLQCLAFTPPLTSFFVQGLHSKSC--LNRECCFSCEF-ESIILKAKE 78
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLS-SQGD 227
LSP ++ L I S ++EDAHEFL+ +D ++S CL + S ++
Sbjct: 79 GKSPLSPLGILSQLQNIGSQLGNGREEDAHEFLRYAIDAMQSVCLKEAGVNAMDSFAEET 138
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE-DVGSLGSALESFTKLEKIEDP 286
++ FGG L SK++C C S+ E ++DL++EIE ++G L AL FT E I D
Sbjct: 139 TLIGLTFGGYLHSKIKCMKCHYKSERQERMMDLTVEIEGNIGKLEDALRRFTSAE-ILDG 197
Query: 287 ETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPY 346
+ K+ C +CK +K++ + + P+V LKRF++ G + K++K + FP LDL PY
Sbjct: 198 DNKYQCGRCKSYEKAKKKMTILEAPNVLTIALKRFQS-GKFG-KLNKSIRFPEILDLAPY 255
Query: 347 TSGGQNSDVELKYHLYAIVEHMG--SSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFV 404
SG SD Y LY ++ H+ ++ GHY Y+++ + W +++DS VT VE E V
Sbjct: 256 MSG--TSDKSPIYRLYGVIVHLDVMNAAFSGHYVCYVKNIQNKWFKIDDSTVTAVELERV 313
Query: 405 LSQDAYILFYAK 416
LS+ AY+L YA+
Sbjct: 314 LSKGAYMLLYAR 325
>gi|149758441|ref|XP_001487991.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 51 [Equus
caballus]
Length = 727
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 113/354 (31%), Positives = 172/354 (48%), Gaps = 51/354 (14%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q TH +PL++ D + C + C++C + +
Sbjct: 381 GLINLGNTCFMNCIVQALTH-IPLLKDFFLSDKHK-CIMTSPSLCLVCEMSSLFHAMYSG 438
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDN 228
S P KL+ + + Y+Q+DAHEFL +LD L +KD+S+ + +N
Sbjct: 439 SRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLHR-----HSKDDSVGQEANN 493
Query: 229 ------IVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE------------------- 263
I+ ++F G L S + C C S S T +P D+SL+
Sbjct: 494 PNCCNCIIDQIFTGGLQSDVTCQACHSVSTTIDPCWDISLDLPGSYATFGSQSPERADST 553
Query: 264 ------IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFH 317
+ + SL L+ FT+ E + K C C+ KQL + K+P VA FH
Sbjct: 554 VSRDDHVPGIPSLTDCLQWFTRPEHL-GSSAKIKCSSCQSYQESTKQLTMKKLPIVACFH 612
Query: 318 LKRFKTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVEL-----------KYHLYAIVE 366
LKRF+ G KI+ + FPLELD+ P+ + ++S +E KY L+A++
Sbjct: 613 LKRFEHVGKQRRKINTFISFPLELDMTPFLASTKDSRMEGQLPTDCAPNENKYSLFAVIN 672
Query: 367 HMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTE 420
H G+ + GHY S+IR D W +D+ +T+ E +L + Y+LFY KQG E
Sbjct: 673 HHGTLES-GHYTSFIRQQKDQWFSCDDAVITKATIEDLLYSEGYLLFYHKQGVE 725
>gi|350421826|ref|XP_003492969.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like [Bombus
impatiens]
Length = 875
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 107/316 (33%), Positives = 161/316 (50%), Gaps = 15/316 (4%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRS-FDHPRPC---DGATEGFCVICALRDH 161
VGAG+ N+GNTC++N+ LQ H LV L S H C DG E C+ CA+
Sbjct: 122 VGAGMYNVGNTCYLNSTLQALFHVPALVNWLLSDSHHTSKCEQNDGGGE--CLTCAVAKT 179
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES 221
++ S SG + P + + L I QQEDAHEFL+ LL+ +E L ++ K
Sbjct: 180 LQSSHQKSGCAIKPFYIYNKLKLICRTMVPGQQEDAHEFLRYLLEGMEKAYL-ARHKASK 238
Query: 222 LSSQGDNI--VQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTK 279
L S + ++FGG + ++++C C S T++ DL ++I +L AL S+
Sbjct: 239 LDSYSKETTPINQIFGGYIRTEVKCLQCRHVSTTFQHFQDLLVDIRKASTLDEALSSYFS 298
Query: 280 LEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPL 339
E++++ + + CE CK +V KQ L++ P V LKRF G KI KH+ F
Sbjct: 299 REQLDNND--YKCEACKRRVPATKQFSLERPPKVLCVQLKRFSVLGG---KISKHIGFKQ 353
Query: 340 ELDLKPYTSGGQNSDVE-LKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTR 398
+D+ PY + L Y L +IV HMG S CGHY + + S ++ +DS V
Sbjct: 354 TIDMGPYLWKEPGEPTQSLTYKLMSIVTHMGPSVNCGHYTAVAKVSTGQYYSFDDSCVRP 413
Query: 399 VEEEFVLSQDAYILFY 414
+ V S +AYI+ +
Sbjct: 414 LSLSNVFSTNAYIMIF 429
>gi|255086105|ref|XP_002509019.1| predicted protein [Micromonas sp. RCC299]
gi|226524297|gb|ACO70277.1| predicted protein [Micromonas sp. RCC299]
Length = 374
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 116/324 (35%), Positives = 164/324 (50%), Gaps = 21/324 (6%)
Query: 108 AGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATE-GFCVICALRDHIELSL 166
AGL N GNTCF + LQC HT L D P P D GFCV C + H+ +L
Sbjct: 57 AGLCNSGNTCFAASALQCLYHTRLLTAHFA--DEPHPHDSCKNPGFCVTCEYQKHVLKAL 114
Query: 167 -ASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-----DSKTKDE 220
A S KL + + I+ F R +QED+HE+++ LLD + L + K+
Sbjct: 115 DAEPRGSFSIGKLTNAIGSIAKHFVRGRQEDSHEYIRGLLDGIHVQALKEFAGEKAEKEL 174
Query: 221 SLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLG--SALESFT 278
+Q IV +FGG +++C CG S Y+ +ID+ +E+ S G ++L+S
Sbjct: 175 DARTQETTIVHHIFGGYTCGQVECIQCGHVSRNYQSMIDIPVEVTAKSSSGIEASLKSNF 234
Query: 279 KLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFP 338
+I D K+ C +C+ V EK + P+V LKR+ T G + KI K VEFP
Sbjct: 235 LDTEILDGSNKYKCARCRAYVRAEKGGKIHVSPNVLVVPLKRY-TMGRFS-KITKFVEFP 292
Query: 339 LELDLKPYTSGGQNSDVELK----YHLYAIVEHM--GSSPTCGHYFSYIRSSPDTWHRLN 392
LDL PY S +++ E K Y LY +V H+ G S GHY SY+R W + +
Sbjct: 293 ATLDLTPYMS--RDAPYEGKSPPTYTLYGVVVHLDWGGSAHSGHYVSYVRLLDGRWCKCD 350
Query: 393 DSRVTRVEEEFVLSQDAYILFYAK 416
D R+ +E VL Q AY+LFY +
Sbjct: 351 DGRIEETDEATVLKQKAYLLFYER 374
>gi|340716721|ref|XP_003396843.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like [Bombus
terrestris]
Length = 875
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 109/316 (34%), Positives = 162/316 (51%), Gaps = 15/316 (4%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRS-FDHPRPC---DGATEGFCVICALRDH 161
VGAG+ N+GNTC++N+ LQ H LV L S H C DG E C+ CA+
Sbjct: 122 VGAGMYNVGNTCYLNSTLQALFHVPALVNWLLSDSHHTSKCEQNDGGGE--CLTCAVAKT 179
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL--DSKTKD 219
++ S SG + P + + L I QQEDAHEFL+ LL+ +E L +K
Sbjct: 180 LQSSHQKSGCAIKPFYIYNKLKLICRTMVPGQQEDAHEFLRYLLEGMEKAYLARHKASKL 239
Query: 220 ESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTK 279
+S S + I Q +FGG + ++++C C S T++ DL ++I +L AL S+
Sbjct: 240 DSYSKETTPINQ-IFGGYIRTEVKCLQCRHVSTTFQHFQDLLVDIRKASTLDEALSSYFS 298
Query: 280 LEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPL 339
E++++ + + CE CK +V KQ L++ P V LKRF G KI KH+ F
Sbjct: 299 REQLDNND--YKCEACKRRVPATKQFSLERPPKVLCVQLKRFSVLGG---KISKHIGFKQ 353
Query: 340 ELDLKPYTSGGQNSDVE-LKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTR 398
+D+ PY + L Y L +IV HMG S CGHY + + S ++ +DS V
Sbjct: 354 TIDMGPYLWKEPGEPTQSLTYKLMSIVTHMGPSVNCGHYTAVAKVSTGQYYSFDDSCVRP 413
Query: 399 VEEEFVLSQDAYILFY 414
+ V S +AYI+ +
Sbjct: 414 LSLSNVFSTNAYIMIF 429
>gi|410988678|ref|XP_004000607.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 51-like [Felis catus]
Length = 667
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 114/355 (32%), Positives = 172/355 (48%), Gaps = 52/355 (14%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q TH +PL++ D + C + C++C + +
Sbjct: 320 GLINLGNTCFMNCIVQALTH-IPLLKDFFLSDKHK-CVMTSPSLCLVCEMSSLFHAMYSG 377
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDN 228
S P KL+ + + Y+Q+DAHEFL +LD L +KD+S+ + +N
Sbjct: 378 SRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLHR-----HSKDDSVGQEANN 432
Query: 229 ------IVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE------------------- 263
I+ ++F G L S + C C S S T +P D+SL+
Sbjct: 433 PNCCNCIIDQIFTGGLQSDVTCQACHSVSTTIDPCWDISLDLPGSCATFSSQSPEGADST 492
Query: 264 ------IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFH 317
I + SL L+ FT+ E + K C C+ KQL + K+P VA FH
Sbjct: 493 VSRDDHIPGIPSLTDCLQWFTRPEYL-GSSAKIKCSSCQSYQESTKQLTMKKLPIVACFH 551
Query: 318 LKRFKTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV------------ELKYHLYAIV 365
LKRF+ G KI+ + FPLELD+ P+ + ++S + E KY L+A++
Sbjct: 552 LKRFEHVGKQRRKINTFISFPLELDMTPFLASTKDSRMKEDQPPTDCTPNENKYSLFAVI 611
Query: 366 EHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTE 420
H G+ + GHY S+IR D W +D+ +T+ E +L + Y+LFY KQG E
Sbjct: 612 NHHGTLES-GHYTSFIRQQKDQWFSCDDAIITKATIEDLLYSEGYLLFYHKQGLE 665
>gi|301792557|ref|XP_002931245.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 51-like
[Ailuropoda melanoleuca]
gi|281352689|gb|EFB28273.1| hypothetical protein PANDA_022094 [Ailuropoda melanoleuca]
Length = 703
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 114/355 (32%), Positives = 172/355 (48%), Gaps = 52/355 (14%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q TH +PL++ D + C + C++C + +
Sbjct: 356 GLINLGNTCFMNCIVQALTH-IPLLKDFFLSDKHK-CIMTSPSLCLVCEMSSLFNAMYSG 413
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDN 228
S P KL+ + + Y+Q+DAHEFL +LD L +KD+S+ + +N
Sbjct: 414 SRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLHR-----HSKDDSIGQEANN 468
Query: 229 ------IVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE------------------- 263
I+ ++F G L S + C C S S T +P D+SL+
Sbjct: 469 PNCCNCIIDQIFTGGLQSDVTCQACHSVSTTIDPCWDISLDLPGSCATFSSQSPERADST 528
Query: 264 ------IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFH 317
I + SL L+ FT+ E + +K C C+ KQL + K+P VA FH
Sbjct: 529 VSRDDHIPGIPSLTDCLQWFTRPEYL-GSNSKIKCSSCQSYQESIKQLTMKKLPVVACFH 587
Query: 318 LKRFKTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV------------ELKYHLYAIV 365
LKRF+ G KI+ + FPLELD+ P+ + + S + E KY L+A++
Sbjct: 588 LKRFEHVGKQRRKINTFISFPLELDMTPFLASTKESRMKEGQPQTDCTSNENKYSLFAVI 647
Query: 366 EHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTE 420
H G+ + GHY S+IR D W +D+ +T+ E +L + Y+LFY KQG E
Sbjct: 648 NHHGTLES-GHYTSFIRQQKDQWFSCDDAIITKATIEDLLYSEGYLLFYHKQGLE 701
>gi|5823525|gb|AAD53181.1|AF179590_1 ubiquitin-specific protease nonstop [Drosophila melanogaster]
Length = 735
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 164/341 (48%), Gaps = 32/341 (9%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLG TCF+N I+Q HT L S H C + C++C + + +
Sbjct: 398 GLLNLGATCFMNCIVQALVHTPLLSDYFMSDRHD--CGSKSSHKCLVCEVSRLFQEFYSG 455
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLS----- 223
S LS +L+ + + Y+Q+DAHEF LD L C+ +K + ES S
Sbjct: 456 SRSPLSLHRLLHLIWNHAKHLAGYEQQDAHEFFIATLDVLHRHCVKAKAEHESKSNSSGS 515
Query: 224 ---------------SQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVG 268
Q + I+ ++F G L S + C C S TY+P D+SL++ +
Sbjct: 516 GSGTNSSNSSSSHCYGQCNCIIDQIFTGMLQSDVVCQACNGVSTTYDPFWDISLDLGETT 575
Query: 269 SLGSA--------LESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKR 320
+ G LE +T+ E + K C CK KQ L +PSV +FHLKR
Sbjct: 576 THGGVTPKTLIDCLERYTRAEHL-GSAAKIKCSTCKSYQESTKQFSLRTLPSVVSFHLKR 634
Query: 321 FKTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSY 380
F+ KI ++FP+E D+ P+ S +N+ + ++ LYA+V H+G+ T GHY +Y
Sbjct: 635 FEHSALIDRKISSFIQFPVEFDMTPFMSEKKNAYGDFRFSLYAVVNHVGTIDT-GHYTAY 693
Query: 381 IRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
+R DTW + +D +T + VL + Y+LFY K E+
Sbjct: 694 VRHQKDTWVKCDDHVITMASLKQVLDSEGYLLFYHKNVLEY 734
>gi|332027218|gb|EGI67307.1| Ubiquitin carboxyl-terminal hydrolase 36 [Acromyrmex echinatior]
Length = 874
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 120/377 (31%), Positives = 185/377 (49%), Gaps = 25/377 (6%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRP------CDGATEGFCVICALR 159
VGAG+ N+GNTC++N+ LQ H LV L S H DG E C+ CA+
Sbjct: 119 VGAGMYNVGNTCYLNSTLQALFHVPALVNWLLSDPHHNSKCEQNILDGGGE--CLTCAVA 176
Query: 160 DHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDS--KT 217
++ S SG + P + + L I QQEDAHEFL+ LL+ +E L T
Sbjct: 177 KTLQFSHQKSGGAIKPFYVYNKLKLICRTMVPGQQEDAHEFLRYLLEGMERAYLTKHKAT 236
Query: 218 KDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESF 277
K ++ S + I Q +FGG + ++++C C S T++ DL ++I +L AL S+
Sbjct: 237 KLDNYSKETTPINQ-IFGGYIRTEVKCLQCQHVSTTFQHFQDLLVDIRKANTLDEALNSY 295
Query: 278 TKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEF 337
E++++ + + CE CK +V KQ L++ P V LKRF G KI +H+ F
Sbjct: 296 FSREQLDNND--YKCEACKRRVPATKQFTLERPPKVLCVQLKRFSYLGG---KISRHIGF 350
Query: 338 PLELDLKPYT--SGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSR 395
+D+ Y G+ S +L Y L ++V HMG S CGHY + + S ++ +DS
Sbjct: 351 KQTIDMGQYLWREPGE-SPKQLTYKLMSMVTHMGPSVNCGHYTAIAQVSSGQYYSFDDSC 409
Query: 396 VTRVEEEFVLSQDAYILFYAKQGTEWVSSLLEAESIGMNADISNSSPKSVLDNVENDYTS 455
V + VLS +AYI+ + E + ++ MN S + + L N N +
Sbjct: 410 VRPISLNNVLSTNAYIMIF-----EMENDSQTQQTAKMNGTTSAKNMPTSLSNSTNKSSV 464
Query: 456 RSGVANAESCKANEPSA 472
+ +A C AN S+
Sbjct: 465 SKALISA-GCFANGSSS 480
>gi|119613630|gb|EAW93224.1| hCG201263, isoform CRA_b [Homo sapiens]
Length = 584
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 114/355 (32%), Positives = 170/355 (47%), Gaps = 52/355 (14%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q TH +PL++ D + C + C++C + +
Sbjct: 237 GLINLGNTCFMNCIVQALTH-IPLLKDFFLSDKHK-CIMTSPSLCLVCEMSSLFHAMYSG 294
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDN 228
S P KL+ + + Y+Q+DAHEFL +LD L +KD+S + +N
Sbjct: 295 SRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILD-----VLHRHSKDDSGGQEANN 349
Query: 229 ------IVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE------------------- 263
I+ ++F G L S + C C S S T +P D+SL+
Sbjct: 350 PNCCNCIIDQIFTGGLQSDVTCQACHSVSTTIDPCWDISLDLPGSCATFDSQNPERADST 409
Query: 264 ------IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFH 317
I + SL L+ FT+ E + K C C+ KQL + K+P VA FH
Sbjct: 410 VSRDDHIPGIPSLTDCLQWFTRPEHL-GSSAKIKCNSCQSYQESTKQLTMKKLPIVACFH 468
Query: 318 LKRFKTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV------------ELKYHLYAIV 365
LKRF+ G KI+ + FPLELD+ P+ + + S + E KY L+A++
Sbjct: 469 LKRFEHVGKQRRKINTFISFPLELDMTPFLASTKESRMKEGQPPTDCVPNENKYSLFAVI 528
Query: 366 EHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTE 420
H G+ + GHY S+IR D W +D+ +T+ E +L + Y+LFY KQG E
Sbjct: 529 NHHGTLES-GHYTSFIRQQKDQWFSCDDAIITKATIEDLLYSEGYLLFYHKQGLE 582
>gi|75027604|sp|Q9VVR1.3|NOT_DROME RecName: Full=Ubiquitin carboxyl-terminal hydrolase nonstop;
AltName: Full=Deubiquitinating enzyme nonstop; AltName:
Full=Ubiquitin thioesterase nonstop; AltName:
Full=Ubiquitin-specific-processing protease nonstop
Length = 735
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 164/341 (48%), Gaps = 32/341 (9%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLG TCF+N I+Q HT L S H C + C++C + + +
Sbjct: 398 GLLNLGATCFMNCIVQALVHTPLLSDYFMSDRHD--CGSKSSHKCLVCEVSRLFQEFYSG 455
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLS----- 223
S LS +L+ + + Y+Q+DAHEF LD L C+ +K + ES S
Sbjct: 456 SRSPLSLHRLLHLIWNHAKHLAGYEQQDAHEFFIATLDVLHRHCVKAKAEHESKSNSSGS 515
Query: 224 ---------------SQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVG 268
Q + I+ ++F G L S + C C S TY+P D+SL++ +
Sbjct: 516 GSGTNSSNSSSSHCYGQCNCIIDQIFTGMLQSDVVCQACNGVSTTYDPFWDISLDLGETT 575
Query: 269 SLGSA--------LESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKR 320
+ G LE +T+ E + K C CK KQ L +PSV +FHLKR
Sbjct: 576 THGGVTPKTLIDCLERYTRAEHL-GSAAKIKCSTCKSYQESTKQFSLRTLPSVVSFHLKR 634
Query: 321 FKTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSY 380
F+ KI ++FP+E D+ P+ S +N+ + ++ LYA+V H+G+ T GHY +Y
Sbjct: 635 FEHSALIDRKISSFIQFPVEFDMTPFMSEKKNAYGDFRFSLYAVVNHVGTIDT-GHYTAY 693
Query: 381 IRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
+R DTW + +D +T + VL + Y+LFY K E+
Sbjct: 694 VRHQKDTWVKCDDHVITMASLKQVLDSEGYLLFYHKNVLEY 734
>gi|291407536|ref|XP_002720078.1| PREDICTED: ubiquitin thiolesterase 3-like [Oryctolagus cuniculus]
Length = 706
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 114/350 (32%), Positives = 167/350 (47%), Gaps = 42/350 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q TH +PL++ + C + C++C + +
Sbjct: 359 GLINLGNTCFMNCIVQALTH-IPLLKDFF-LSNKHKCIMTSPSLCLVCEMSSLFHAMYSG 416
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDN 228
S P KL+ + + Y+Q+DAHEFL +LD L D ES +S N
Sbjct: 417 SRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLHRHSKDDSVGQESSNSNCCN 476
Query: 229 -IVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE------------------------ 263
I+ ++F G L S + C C S S T +P D+SL+
Sbjct: 477 CIIDQIFTGGLQSDVTCQACHSVSTTIDPCWDISLDLPGSCATFSPQNTEMADSTMSRAD 536
Query: 264 -IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK 322
I + SL L+ FT+ E + K C C+ KQL + K+P VA FHLKRF+
Sbjct: 537 HIPGIPSLTDCLQWFTRPEDL-GSSAKIKCSSCQSYQESTKQLTMKKLPMVACFHLKRFE 595
Query: 323 TDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV------------ELKYHLYAIVEHMGS 370
G KI+ + FPLELD+ P+ + + S + E KY L+A++ H G+
Sbjct: 596 HVGKQRRKINTFISFPLELDMTPFLASTKESRMKECQPSTDCVSNENKYSLFAVINHHGT 655
Query: 371 SPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTE 420
+ GHY S+IR D W +D+ +T+ E +L + Y+LFY KQG E
Sbjct: 656 LES-GHYTSFIRQQKDQWFSCDDAIITKATIEDLLYSEGYLLFYHKQGLE 704
>gi|16198231|gb|AAL13936.1| LD43147p [Drosophila melanogaster]
Length = 703
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 164/341 (48%), Gaps = 32/341 (9%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLG TCF+N I+Q HT L S H C + C++C + + +
Sbjct: 366 GLLNLGATCFMNCIVQALVHTPLLSDYFMSDRHD--CGSKSSHKCLVCEVSRLFQEFYSG 423
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLS----- 223
S LS +L+ + + Y+Q+DAHEF LD L C+ +K + ES S
Sbjct: 424 SRSPLSLHRLLHLIWNHAKHLAGYEQQDAHEFFIATLDVLHRHCVKAKAEHESKSNSSGS 483
Query: 224 ---------------SQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVG 268
Q + I+ ++F G L S + C C S TY+P D+SL++ +
Sbjct: 484 GSGTNSSNSSSSHCYGQCNCIIDQIFTGMLQSDVVCQACNGVSTTYDPFWDISLDLGETT 543
Query: 269 SLGSA--------LESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKR 320
+ G LE +T+ E + K C CK KQ L +PSV +FHLKR
Sbjct: 544 THGGVTPKTLIDCLERYTRAEHL-GSAAKIKCSTCKSYQESTKQFSLRTLPSVVSFHLKR 602
Query: 321 FKTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSY 380
F+ KI ++FP+E D+ P+ S +N+ + ++ LYA+V H+G+ T GHY +Y
Sbjct: 603 FEHSALIDRKISSFIQFPVEFDMTPFMSEKKNAYGDFRFSLYAVVNHVGTIDT-GHYTAY 661
Query: 381 IRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
+R DTW + +D +T + VL + Y+LFY K E+
Sbjct: 662 VRHQKDTWVKCDDHVITMASLKQVLDSEGYLLFYHKNVLEY 702
>gi|159469257|ref|XP_001692784.1| predicted protein [Chlamydomonas reinhardtii]
gi|158278037|gb|EDP03803.1| predicted protein [Chlamydomonas reinhardtii]
Length = 263
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 107/313 (34%), Positives = 147/313 (46%), Gaps = 55/313 (17%)
Query: 107 GAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSL 166
GAGL NLGNTCF+N++LQ +L +
Sbjct: 3 GAGLHNLGNTCFMNSVLQ--------------------------------SLHPPPTAAS 30
Query: 167 ASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDS-KTKDESLSSQ 225
++ +LSP ED+HEFL+CLLD + CL +
Sbjct: 31 PAALPILSP-----------------SCEDSHEFLRCLLDAMHEACLRRFRPAKPPPELA 73
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
V R+FGG L S+++C S T++P +DLSLEI SL AL +FT E +
Sbjct: 74 ATTFVYRIFGGRLKSQIECDGVDYVSRTFDPFLDLSLEINRAASLERALAAFTAAEVLTA 133
Query: 286 PETKFT--CEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDL 343
P T C C V K++ ++ P+V HLKRF+ G + KI+KHV F EL+L
Sbjct: 134 PTTSHGRRCGSCASWVRATKRISIEDAPNVLTVHLKRFEY-GGFGAKINKHVAFGTELNL 192
Query: 344 KPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
+PY S + L Y LY ++ H G S GHY Y++++ WH +D RV V E
Sbjct: 193 RPYMSATKGP--ALMYDLYGVLVHHGYSVNSGHYICYVKAANGLWHVCDDHRVAAVGERT 250
Query: 404 VLSQDAYILFYAK 416
VL Q AYILFY +
Sbjct: 251 VLDQRAYILFYIR 263
>gi|332266327|ref|XP_003282162.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 51 [Nomascus
leucogenys]
Length = 711
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 114/355 (32%), Positives = 171/355 (48%), Gaps = 52/355 (14%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q TH +PL++ D + C + C++C + +
Sbjct: 364 GLINLGNTCFMNCIVQALTH-IPLLKDFFLSDKHK-CIMTSPSLCLVCEMSSLFHAMYSG 421
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDN 228
S P KL+ + + Y+Q+DAHEFL +LD L +KD+S + +N
Sbjct: 422 SRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLHR-----HSKDDSGGQEANN 476
Query: 229 ------IVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE------------------- 263
I+ ++F G L S + C C S S T +P D+SL+
Sbjct: 477 PNCCNCIIDQIFTGGLQSDVTCQACHSVSTTIDPCWDISLDLPGSCATFDSQNPERADST 536
Query: 264 ------IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFH 317
I + SL L+ FT+ E + K C C+ KQL + K+P VA FH
Sbjct: 537 VSRDDHIPGIPSLTDCLQWFTRPEHL-GSSAKIKCNSCQSYQESTKQLTMKKLPIVACFH 595
Query: 318 LKRFKTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV------------ELKYHLYAIV 365
LKRF+ G KI+ + FPLELD+ P+ + ++S + E KY L+A++
Sbjct: 596 LKRFEHVGKQRRKINTFISFPLELDMTPFLASTKDSRMKEGQPPTDCVPNENKYSLFAVI 655
Query: 366 EHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTE 420
H G+ + GHY S+IR D W +D+ +T+ E +L + Y+LFY KQG E
Sbjct: 656 NHHGTLES-GHYTSFIRQQKDQWFSCDDAIITKATIEDLLYSEGYLLFYHKQGLE 709
>gi|66501571|ref|XP_392160.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Apis
mellifera]
Length = 541
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 135/418 (32%), Positives = 202/418 (48%), Gaps = 47/418 (11%)
Query: 43 PSNHPLTLTDLDKDQNNDDDDDYEEIYRDTRPISSSYGRYNW-GSSLLSRPVEKHWPIQI 101
PS P + + +D + D E + R+ RP ++ ++ G+S +RP K +I
Sbjct: 120 PSTTPSSRRENSEDNDADALWKAEVVVRNLRPRTARKRLHSLDGTSGDNRPATKRRSSKI 179
Query: 102 KPTGVGAGLENLGNTCFINAILQCFTHT---------LPLVQALRSFDHPRPCDG--ATE 150
GL NLGNTCF+N +LQ F + +P ++ + FD P G T
Sbjct: 180 TKEKKVVGLRNLGNTCFMNVVLQSFNNISHFCEYLTQMPCLEGI-PFDEPPTHRGRIVTP 238
Query: 151 G----FCVICALRDHIELSL------ASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEF 200
G F L + + L S+G+ +SP L + + F+ YQQ+DAHEF
Sbjct: 239 GRAKEFMSDALLAEELRKVLLGLNLGGSNGQAISPECLFLVIWKVVPRFRGYQQQDAHEF 298
Query: 201 LQCLLDRLESCCLD--SKTKDESLSSQG-DNIVQRVFGGCLISKLQCCNCGSCSDTYEPL 257
L +LDRL + L + E L +G +IV VFGG L+S + C NC + S T+EP
Sbjct: 299 LTYMLDRLHTELLQLLPRLGHEPLGLRGKQSIVTAVFGGTLLSVVHCMNCRTDSKTHEPF 358
Query: 258 IDLSLEI-----------EDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLM 306
DLSL+I E+V SL +L F K+E++ D E F C+ C + K+
Sbjct: 359 QDLSLDIPDRLQRRTKEQEEVCSLTYSLTRFFKVEELADSELYF-CDNCMGKQRSTKRFW 417
Query: 307 LDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE-LDLKPYTSGGQN------SDVELKY 359
+ ++P+V H+KRF+ SY K+D V+FP++ LD+ +T G N S+ L Y
Sbjct: 418 IHRLPNVLCLHIKRFRWCNSYRSKVDTQVDFPMKSLDMSAFTVRGVNGTKLGASNSHL-Y 476
Query: 360 HLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQ 417
L A++ H GS GHY ++ W NDS V + V YILFY ++
Sbjct: 477 DLAAVIVHHGSGAGTGHYTAFAVHD-GQWFHFNDSSVRPATTDAVAKCKPYILFYVRK 533
>gi|357162360|ref|XP_003579384.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like
[Brachypodium distachyon]
Length = 563
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 113/368 (30%), Positives = 173/368 (47%), Gaps = 62/368 (16%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPR-PCDGAT-----------EGFCVIC 156
GL NLGNTCF+N++LQ H PL H R C T + C+ C
Sbjct: 186 GLNNLGNTCFMNSVLQALLHAPPLRNYFLGDRHNRFLCPRRTPMRHRAAGADAKAACLAC 245
Query: 157 ALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSK 216
L + + + SP K + + +S Y+Q+DAHEF +LD + D +
Sbjct: 246 DLDEIYSATFSGERTPYSPAKFLYSWWQHASNLASYEQQDAHEFFISILDHIHENIKDEQ 305
Query: 217 TKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE----------- 265
K I RVF G L S + C NCG S T+EP +D+SL+++
Sbjct: 306 HKSHEQGHGDCCIAHRVFSGILRSDVICTNCGFSSTTFEPCVDISLDLDAGSNNSLANPK 365
Query: 266 ---------------DVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKV 310
V +L LE FT+ E++ D E KF CE+CKE+ KQ+ + ++
Sbjct: 366 LHARNGERNLAGTNSKVSTLMRCLERFTRAERL-DAEQKFFCERCKERQESLKQMSIRRL 424
Query: 311 PSVAAFHLKRFKTDGSYVV--KIDKHVEFPLELDLKPYTSGG------------------ 350
P V+ FH+KRF+ + K+D ++FP LD+ PY S
Sbjct: 425 PLVSCFHIKRFEHSSVKKMSRKVDHSLQFPFSLDMAPYLSSSVLRSRYGNRIFPSEASDS 484
Query: 351 -QNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDA 409
S++ ++ ++A++ H G GHY +Y+R + + W+R +D+ VTRVEE V + A
Sbjct: 485 DAVSELSSEFEIFAVITHSGKLDA-GHYVTYLRLN-NLWYRCDDAWVTRVEEHTVRTSQA 542
Query: 410 YILFYAKQ 417
Y+LFY ++
Sbjct: 543 YMLFYVQK 550
>gi|357626409|gb|EHJ76510.1| putative Ubiquitin carboxyl-terminal hydrolase 22 [Danaus
plexippus]
Length = 487
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 106/327 (32%), Positives = 163/327 (49%), Gaps = 18/327 (5%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL+NLG+TCF+N I+Q HT PL++ C G C++C + + +
Sbjct: 159 GLQNLGSTCFMNCIVQTLIHT-PLLRDY-FLGEKHKCKTQGSGKCLVCEVSKLFQEFYSG 216
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDN 228
+ L+ +L+ + + Y+Q+DAHEF LD L C++ E + N
Sbjct: 217 AKTPLTLHRLLHLIWTHARHLAGYEQQDAHEFFIATLDVLHRHCMNGVEDTEKKENGRCN 276
Query: 229 -IVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIEDPE 287
I+ ++F G L S + C +C S T +P D+SL++ GSL + LE FT+ E +
Sbjct: 277 CIIDQIFTGGLQSDVVCTSCSGVSTTIDPFWDISLDVAGPGSLQACLERFTRAEHL-GSA 335
Query: 288 TKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPYT 347
K C C+ KQL L+ +P VA+FHLKRF+ KI V FP ELD+ P+
Sbjct: 336 AKIKCSNCRAYRESTKQLTLETLPIVASFHLKRFEHSSQIDRKISAFVSFPAELDMTPFM 395
Query: 348 S-------GGQNSDV------ELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDS 394
S N++ + +Y L+A+V H+GS GHY +Y+R +W + +D
Sbjct: 396 STHRRAVEAADNNNAPEGVFEDNRYSLFAVVNHLGSLDA-GHYTAYVRQMKGSWFKCDDH 454
Query: 395 RVTRVEEEFVLSQDAYILFYAKQGTEW 421
+TR VL + Y+LFY K E+
Sbjct: 455 MITRASLREVLDSEGYLLFYHKTVLEY 481
>gi|91084663|ref|XP_967750.1| PREDICTED: similar to ubiquitin specific protease 41 [Tribolium
castaneum]
gi|270008628|gb|EFA05076.1| hypothetical protein TcasGA2_TC015173 [Tribolium castaneum]
Length = 764
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 118/349 (33%), Positives = 180/349 (51%), Gaps = 38/349 (10%)
Query: 101 IKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGF--CVICAL 158
IK G+ GL+N+GNTCF+N+++QC ++T L++ L + + T +I A
Sbjct: 418 IKTQGLN-GLKNIGNTCFMNSVIQCLSNTKTLLEYLLQDHYVNDINTTTSAMKGSLIKAF 476
Query: 159 RDHIE--LSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCC---- 212
+ I+ S +S +V++ L + + F Y Q+DA EFL+ LL+ L
Sbjct: 477 AEVIKKLWSQDASDRVVNTSSLKSQIQRFAPRFIGYAQQDAQEFLRYLLEGLHEDVNRVK 536
Query: 213 ---------LDSKTKDESLSSQGDNIVQRV--------FGGCLISKLQCCNCGSCSDTYE 255
+D K D S++ N R+ F G L S L+C +CG CS T++
Sbjct: 537 EKPKPIITEIDEKLTDSEKSAESWNRYLRMDNSKIVDYFVGQLKSTLKCTHCGHCSVTFD 596
Query: 256 PLIDLSLEIEDVGS---LGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPS 312
P DLSL I L L+SFT+ E + D + K TC KCKE+ K + K P
Sbjct: 597 PFWDLSLPIPQRAGQVRLAQCLDSFTREETL-DGDEKPTCSKCKERRKCTKSFTIQKFPK 655
Query: 313 VAAFHLKRFKTDGSYVVKIDKHVEFPLE-LDLKPYTSGGQNSDVELKYHLYAIVEHMGSS 371
+ HLKRF + K+ V+FPLE LD+ Y + ++ +Y+LYAI H G++
Sbjct: 656 ILVIHLKRFSLAERFRGKLSVTVDFPLEGLDMSNYAA---DNITPCRYNLYAISNHSGTT 712
Query: 372 PTCGHYFSYIRSSPDT--WHRLNDSRVTRVEEEFVLSQDAYILFYAKQG 418
+ GHY +Y R P T WH NDSRV+ + + ++S +AY+LFY ++G
Sbjct: 713 YS-GHYTAYCR-HPYTKAWHEYNDSRVSSISSKAIVSGEAYVLFYEQEG 759
>gi|242004654|ref|XP_002423195.1| ubiquitin carboxyl-terminal hydrolase DUB-1, putative [Pediculus
humanus corporis]
gi|212506160|gb|EEB10457.1| ubiquitin carboxyl-terminal hydrolase DUB-1, putative [Pediculus
humanus corporis]
Length = 479
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 100/316 (31%), Positives = 167/316 (52%), Gaps = 12/316 (3%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPC----DGATEGFCVICALRDH 161
VG+G+ N+GNTC++N+ LQ H LV L S + C D + C++
Sbjct: 115 VGSGMSNMGNTCYLNSTLQALFHVPALVNWLLSETSHQNCVQNSDYQMHPDDITCSVIKT 174
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES 221
++ S +G + P + L I QEDAHEF++ LL+ LE L ++ +
Sbjct: 175 LKCSQQKTGNCMKPISVYSKLKAICKHLSHGSQEDAHEFMRYLLESLEKNYL-TRFQGHK 233
Query: 222 L--SSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTK 279
L +S+ + ++FGG + +++ C +C + S T++ DL L+I +L AL + +
Sbjct: 234 LDSTSKETTPINQIFGGYIRTEVVCLSCRAVSTTFQHFQDLPLDIRKASTLNDALAGYFE 293
Query: 280 LEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK-TDGSYVVKIDKHVEFP 338
E++ D E + CEKC +VSV K+ ++K P+V LKRF T+G KI K V+ P
Sbjct: 294 RERLPDGEDAYNCEKCNRKVSVYKKFTIEKPPNVLCVQLKRFSMTNG----KITKQVQLP 349
Query: 339 LELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTR 398
LD+ + S + +KY L +++ HMG S CGHY + ++ ++++ +DS V +
Sbjct: 350 QYLDITRFISTSIHPRHPVKYKLVSMITHMGQSVNCGHYTAIALAANGSYYQFDDSSVRQ 409
Query: 399 VEEEFVLSQDAYILFY 414
+ VLS AY++ Y
Sbjct: 410 IPLSTVLSMSAYLILY 425
>gi|297710131|ref|XP_002831758.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 51 [Pongo abelii]
Length = 711
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 114/355 (32%), Positives = 170/355 (47%), Gaps = 52/355 (14%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q TH +PL++ D + C + C++C + +
Sbjct: 364 GLINLGNTCFMNCIVQALTH-IPLLKDFFLSDKHK-CIMTSPSLCLVCEMSSLFHAMYSG 421
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDN 228
S P KL+ + + Y+Q+DAHEFL +LD L +KD+S + +N
Sbjct: 422 SRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLHR-----HSKDDSGGQEANN 476
Query: 229 ------IVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE------------------- 263
I+ ++F G L S + C C S S T +P D+SL+
Sbjct: 477 PNCCNCIIDQIFTGGLQSDVTCQACHSVSTTIDPCWDISLDLPGSCATFDSQNPERADST 536
Query: 264 ------IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFH 317
I + SL L+ FT+ E + K C C+ KQL + K+P VA FH
Sbjct: 537 VSRDDHIPGIPSLTDCLQWFTRPEHL-GSSAKIKCNSCQSYQESTKQLTMKKLPIVACFH 595
Query: 318 LKRFKTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV------------ELKYHLYAIV 365
LKRF+ G KI+ + FPLELD+ P+ + + S + E KY L+A++
Sbjct: 596 LKRFEHVGKQRRKINTFISFPLELDMTPFLASTKESRMKEGQPPTDCVPNENKYSLFAVI 655
Query: 366 EHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTE 420
H G+ + GHY S+IR D W +D+ +T+ E +L + Y+LFY KQG E
Sbjct: 656 NHHGTLES-GHYTSFIRQQKDQWFSCDDAIITKATIEDLLYSEGYLLFYHKQGLE 709
>gi|397465305|ref|XP_003804442.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 51 [Pan paniscus]
Length = 687
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 114/355 (32%), Positives = 170/355 (47%), Gaps = 52/355 (14%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q TH +PL++ D + C + C++C + +
Sbjct: 340 GLINLGNTCFMNCIVQALTH-IPLLKDFFLSDKHK-CIMTSPSLCLVCEMSSLFHAMYSG 397
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDN 228
S P KL+ + + Y+Q+DAHEFL +LD L +KD+S + +N
Sbjct: 398 SRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLHR-----HSKDDSGGQEANN 452
Query: 229 ------IVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE------------------- 263
I+ ++F G L S + C C S S T +P D+SL+
Sbjct: 453 PNCCNCIIDQIFTGGLQSDVTCQACHSVSTTIDPCWDISLDLPGSCATFDSQNPERADSA 512
Query: 264 ------IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFH 317
I + SL L+ FT+ E + K C C+ KQL + K+P VA FH
Sbjct: 513 VSRDDHIPGIPSLTDCLQWFTRPEHL-GSSAKIKCNSCQSYQESTKQLTMKKLPIVACFH 571
Query: 318 LKRFKTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV------------ELKYHLYAIV 365
LKRF+ G KI+ + FPLELD+ P+ + + S + E KY L+A++
Sbjct: 572 LKRFEHVGKQRRKINTFISFPLELDMTPFLASTKESRMKEGQPPTDCVPNENKYSLFAVI 631
Query: 366 EHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTE 420
H G+ + GHY S+IR D W +D+ +T+ E +L + Y+LFY KQG E
Sbjct: 632 NHHGTLES-GHYTSFIRQQKDQWFSCDDAIITKATIEDLLYSEGYLLFYHKQGLE 685
>gi|195128351|ref|XP_002008627.1| GI11709 [Drosophila mojavensis]
gi|193920236|gb|EDW19103.1| GI11709 [Drosophila mojavensis]
Length = 710
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 109/343 (31%), Positives = 167/343 (48%), Gaps = 35/343 (10%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLG TCF+N I+Q HT PL+ F R G + C++C + + +
Sbjct: 372 GLLNLGATCFMNCIVQALVHT-PLLSDY--FMSDRHDCGKSSHKCLVCEVSRLFQEFYSG 428
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSS---- 224
S LS +L+ + + Y+Q+DAHEF LD L C+ +K++ ES S+
Sbjct: 429 SRTPLSLHRLLHLIWNHAKHLAGYEQQDAHEFFIATLDVLHRHCVKAKSEHESKSNSSSA 488
Query: 225 ------------------QGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIED 266
Q + I+ ++F G L S + C C S T++P D+SL++ +
Sbjct: 489 TGGNSSSSANATATHSYGQCNCIIDQIFTGMLQSDVVCQACKGVSTTFDPFWDISLDLGE 548
Query: 267 VGSLGSA--------LESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHL 318
S G LE +T+ E + K C CK KQ L +PSV +FHL
Sbjct: 549 TTSHGGVTPKTLIDCLERYTRAEHL-GSAAKIKCSTCKSYQESTKQFSLRTLPSVVSFHL 607
Query: 319 KRFKTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYF 378
KRF+ KI ++FP+E D+ P+ S N+ + ++ LYA+V H+G+ T GHY
Sbjct: 608 KRFEHSALIDRKISSFIQFPVEFDMTPFMSEKNNAYGDFRFSLYAVVNHVGTIDT-GHYT 666
Query: 379 SYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
+Y+R DTW + +D +T + VL + Y+LFY K E+
Sbjct: 667 AYVRHQKDTWVKCDDHVITMASLKQVLDSEGYLLFYHKNVLEY 709
>gi|41152235|ref|NP_958443.1| ubiquitin carboxyl-terminal hydrolase 51 [Homo sapiens]
gi|52000873|sp|Q70EK9.1|UBP51_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 51; AltName:
Full=Deubiquitinating enzyme 51; AltName: Full=Ubiquitin
thioesterase 51; AltName:
Full=Ubiquitin-specific-processing protease 51
gi|40788183|emb|CAE47750.2| ubiquitin specific proteinase 51 [Homo sapiens]
gi|47174857|tpe|CAE48396.2| TPA: ubiquitin specific protease-51 [Homo sapiens]
gi|225000462|gb|AAI72281.1| Ubiquitin specific peptidase 51 [synthetic construct]
Length = 711
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 114/355 (32%), Positives = 170/355 (47%), Gaps = 52/355 (14%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q TH +PL++ D + C + C++C + +
Sbjct: 364 GLINLGNTCFMNCIVQALTH-IPLLKDFFLSDKHK-CIMTSPSLCLVCEMSSLFHAMYSG 421
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDN 228
S P KL+ + + Y+Q+DAHEFL +LD L +KD+S + +N
Sbjct: 422 SRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLHR-----HSKDDSGGQEANN 476
Query: 229 ------IVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE------------------- 263
I+ ++F G L S + C C S S T +P D+SL+
Sbjct: 477 PNCCNCIIDQIFTGGLQSDVTCQACHSVSTTIDPCWDISLDLPGSCATFDSQNPERADST 536
Query: 264 ------IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFH 317
I + SL L+ FT+ E + K C C+ KQL + K+P VA FH
Sbjct: 537 VSRDDHIPGIPSLTDCLQWFTRPEHL-GSSAKIKCNSCQSYQESTKQLTMKKLPIVACFH 595
Query: 318 LKRFKTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV------------ELKYHLYAIV 365
LKRF+ G KI+ + FPLELD+ P+ + + S + E KY L+A++
Sbjct: 596 LKRFEHVGKQRRKINTFISFPLELDMTPFLASTKESRMKEGQPPTDCVPNENKYSLFAVI 655
Query: 366 EHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTE 420
H G+ + GHY S+IR D W +D+ +T+ E +L + Y+LFY KQG E
Sbjct: 656 NHHGTLES-GHYTSFIRQQKDQWFSCDDAIITKATIEDLLYSEGYLLFYHKQGLE 709
>gi|114688817|ref|XP_521085.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 51 isoform 2 [Pan
troglodytes]
Length = 711
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 114/355 (32%), Positives = 170/355 (47%), Gaps = 52/355 (14%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q TH +PL++ D + C + C++C + +
Sbjct: 364 GLINLGNTCFMNCIVQALTH-IPLLKDFFLSDKHK-CIMTSPSLCLVCEMSSLFHAMYSG 421
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDN 228
S P KL+ + + Y+Q+DAHEFL +LD L +KD+S + +N
Sbjct: 422 SRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLHR-----HSKDDSGGQEANN 476
Query: 229 ------IVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE------------------- 263
I+ ++F G L S + C C S S T +P D+SL+
Sbjct: 477 PNCCNCIIDQIFTGGLQSDVTCQACHSVSTTIDPCWDISLDLPGSCATFDSQNPERADSA 536
Query: 264 ------IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFH 317
I + SL L+ FT+ E + K C C+ KQL + K+P VA FH
Sbjct: 537 VSRDDHIPGIPSLTDCLQWFTRPEHL-GSSAKIKCNSCQSYQESTKQLTMKKLPIVACFH 595
Query: 318 LKRFKTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV------------ELKYHLYAIV 365
LKRF+ G KI+ + FPLELD+ P+ + + S + E KY L+A++
Sbjct: 596 LKRFEHVGKQRRKINTFISFPLELDMTPFLASTKESRMKEGQPPTDCVPNENKYSLFAVI 655
Query: 366 EHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTE 420
H G+ + GHY S+IR D W +D+ +T+ E +L + Y+LFY KQG E
Sbjct: 656 NHHGTLES-GHYTSFIRQQKDQWFSCDDAIITKATIEDLLYSEGYLLFYHKQGLE 709
>gi|403307110|ref|XP_003944051.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 51 [Saimiri
boliviensis boliviensis]
Length = 674
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 114/355 (32%), Positives = 170/355 (47%), Gaps = 52/355 (14%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q TH +PL++ D + C + C++C + +
Sbjct: 327 GLINLGNTCFMNCIVQALTH-IPLLKDFFLSDKHK-CIMTSPSLCLVCEMSSLFHAMYSG 384
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDN 228
S P KL+ + + Y+Q+DAHEFL +LD L +KD+S + +N
Sbjct: 385 SRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLHR-----HSKDDSGGQETNN 439
Query: 229 ------IVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE------------------- 263
I+ ++F G L S + C C S S T +P D+SL+
Sbjct: 440 PNCCNCIIDQIFTGGLQSDVTCQTCHSVSTTIDPCWDISLDLPGSCATFDSQNPERAGST 499
Query: 264 ------IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFH 317
I + SL L+ FT+ E + K C C+ KQL + K+P VA FH
Sbjct: 500 VSRDDHIPGIPSLTDCLQWFTRPEHL-GSSAKIKCNSCQSYQESTKQLTMKKLPIVACFH 558
Query: 318 LKRFKTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV------------ELKYHLYAIV 365
LKRF+ G KI+ + FPLELD+ P+ + + S + E KY L+A++
Sbjct: 559 LKRFEHVGKQRRKINTFISFPLELDMTPFLASTKESRMKEGQPPTDCVPNENKYSLFAVI 618
Query: 366 EHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTE 420
H G+ + GHY S+IR D W +D+ +T+ E +L + Y+LFY KQG E
Sbjct: 619 NHHGTLES-GHYTSFIRQQKDQWFSCDDAIITKATIEDLLYSEGYLLFYHKQGLE 672
>gi|426396116|ref|XP_004064301.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 51 [Gorilla
gorilla gorilla]
Length = 648
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 114/355 (32%), Positives = 170/355 (47%), Gaps = 52/355 (14%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q TH +PL++ D + C + C++C + +
Sbjct: 301 GLINLGNTCFMNCIVQALTH-IPLLKDFFLSDKHK-CIMTSPSLCLVCEMSSLFHAMYSG 358
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDN 228
S P KL+ + + Y+Q+DAHEFL +LD L +KD+S + +N
Sbjct: 359 SRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLHR-----HSKDDSGGQEANN 413
Query: 229 ------IVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE------------------- 263
I+ ++F G L S + C C S S T +P D+SL+
Sbjct: 414 PNCCNCIIDQIFTGGLQSDVTCQACHSVSTTIDPCWDISLDLPGSCATFDSQNPERADST 473
Query: 264 ------IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFH 317
I + SL L+ FT+ E + K C C+ KQL + K+P VA FH
Sbjct: 474 VSRDDHIPGIPSLTDCLQWFTRPEHL-GSSAKIKCNSCQSYQESTKQLTMKKLPIVACFH 532
Query: 318 LKRFKTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV------------ELKYHLYAIV 365
LKRF+ G KI+ + FPLELD+ P+ + + S + E KY L+A++
Sbjct: 533 LKRFEHVGKQRRKINTFISFPLELDMTPFLASTKESRMKEGQPPTDCVPNENKYSLFAVI 592
Query: 366 EHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTE 420
H G+ + GHY S+IR D W +D+ +T+ E +L + Y+LFY KQG E
Sbjct: 593 NHHGTLES-GHYTSFIRQQKDQWFSCDDAIITKATIEDLLYSEGYLLFYHKQGLE 646
>gi|194751819|ref|XP_001958221.1| GF10813 [Drosophila ananassae]
gi|190625503|gb|EDV41027.1| GF10813 [Drosophila ananassae]
Length = 668
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 105/341 (30%), Positives = 163/341 (47%), Gaps = 32/341 (9%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLG TCF+N I+Q HT L S H C + C++C + + +
Sbjct: 331 GLLNLGATCFMNCIVQALVHTPLLSDYFMSDRHD--CGSKSSHKCLVCEVSRLFQEFYSG 388
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES------- 221
S LS +L+ + + Y+Q+DAHEF LD L C+ +K + E+
Sbjct: 389 SRSPLSLHRLLHLIWNHAKHLAGYEQQDAHEFFIATLDVLHRHCVKAKAEHENKSNSSSS 448
Query: 222 -------------LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVG 268
Q + I+ ++F G L S + C C S T++P D+SL++ +
Sbjct: 449 GSGTNSSSSSSSHCYGQCNCIIDQIFTGMLQSDVVCQACNGVSTTFDPFWDISLDLGETT 508
Query: 269 SLGSA--------LESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKR 320
+ G LE +T+ E + K C CK KQ L +PSV +FHLKR
Sbjct: 509 THGGVTPKTLIDCLERYTRAEHL-GSAAKIKCSTCKSYQESTKQFSLRTLPSVVSFHLKR 567
Query: 321 FKTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSY 380
F+ KI ++FP+E D+ P+ S +N+ + ++ LYA+V H+G+ T GHY +Y
Sbjct: 568 FEHSALIDRKISSFIQFPVEFDMTPFMSEKKNAYGDFRFSLYAVVNHVGTIDT-GHYTAY 626
Query: 381 IRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
+R DTW + +D +T + VL + Y+LFY K E+
Sbjct: 627 VRHQKDTWVKCDDHVITMASLKQVLDSEGYLLFYHKNVLEY 667
>gi|195379222|ref|XP_002048379.1| GJ11383 [Drosophila virilis]
gi|194155537|gb|EDW70721.1| GJ11383 [Drosophila virilis]
Length = 704
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 106/343 (30%), Positives = 162/343 (47%), Gaps = 34/343 (9%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLG TCF+N I+Q HT L S H C C++C + + +
Sbjct: 365 GLLNLGATCFMNCIVQALVHTPLLSDYFMSDRHD--CGSKATHKCLVCEVSRLFQEFYSG 422
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES------- 221
S LS +L+ + + Y+Q+DAHEF LD L C+ +K++ ES
Sbjct: 423 SRSPLSLHRLLHLIWNHAKHLAGYEQQDAHEFFIATLDVLHRHCVKAKSEHESKSNSSSA 482
Query: 222 ---------------LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIED 266
Q + I+ ++F G L S + C C S T++P D+SL++ +
Sbjct: 483 SGGNSSSGGNATATHCYGQCNCIIDQIFTGMLQSDVVCQACNGVSTTFDPFWDISLDLGE 542
Query: 267 VGSLGSA--------LESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHL 318
+ G LE +T+ E + K C CK KQ L +PSV +FHL
Sbjct: 543 TTTHGGVTPKTLIDCLERYTRAEHL-GSAAKIKCSTCKSYQESTKQFSLRTLPSVVSFHL 601
Query: 319 KRFKTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYF 378
KRF+ KI ++FP+E D+ P+ S N+ + ++ LYA+V H+G+ T GHY
Sbjct: 602 KRFEHSALIDRKISSFIQFPVEFDMTPFMSEKNNAYGDFRFSLYAVVNHVGTIDT-GHYT 660
Query: 379 SYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
+Y+R DTW + +D +T + VL + Y+LFY K E+
Sbjct: 661 AYVRHQKDTWVKCDDHVITMASLKQVLDSEGYLLFYHKNVLEY 703
>gi|222622509|gb|EEE56641.1| hypothetical protein OsJ_06049 [Oryza sativa Japonica Group]
Length = 897
Score = 169 bits (427), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 106/280 (37%), Positives = 158/280 (56%), Gaps = 14/280 (5%)
Query: 142 PRPCDGATEGFCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFL 201
PR C ++ +C++C L + +L SG +SP +++ NL I QEDAHEFL
Sbjct: 384 PRGC---SKNWCLMCELEQYAS-TLRESGGPVSPSRILSNLRNIGCRLGGGSQEDAHEFL 439
Query: 202 QCLLDRLESCCLDSKTKDESL--SSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLID 259
+ L+ ++ CLD ++ + S Q ++Q++FGG L SK++C C S+ YE ++D
Sbjct: 440 RHLVMSMQGACLDGLGGEKQVEASLQETTLIQQMFGGRLKSKVKCLRCYHESERYENIMD 499
Query: 260 LSLEIED-VGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHL 318
L+LEI V SL AL FT E + D E + C +C V KQL + +VP++ L
Sbjct: 500 LTLEIHGWVESLQDALTQFTAPEDL-DGENMYKCGRCSAYVKARKQLSVHEVPNILTVVL 558
Query: 319 KRFKTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGS--SPTCGH 376
KRF+T G Y KI+K V FP LD+ P+ +G D Y LYA+V H+ + + GH
Sbjct: 559 KRFQT-GKYG-KINKCVTFPDMLDMVPFVTGA--GDNPPLYFLYAVVVHVDTENASFSGH 614
Query: 377 YFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAK 416
Y SY++ TW R++DS V V V+S+ AY+LFY +
Sbjct: 615 YISYVKDMQGTWLRIDDSEVQAVSLNQVMSEGAYMLFYMR 654
>gi|195494556|ref|XP_002094888.1| GE22066 [Drosophila yakuba]
gi|194180989|gb|EDW94600.1| GE22066 [Drosophila yakuba]
Length = 679
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 107/341 (31%), Positives = 164/341 (48%), Gaps = 32/341 (9%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLG TCF+N I+Q HT L S H C + C++C + + +
Sbjct: 342 GLLNLGATCFMNCIVQALVHTPLLSDYFMSDRHD--CGSKSSPKCLVCEVSRLFQEFYSG 399
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLS----- 223
S LS +L+ + + Y+Q+DAHEF LD L C+ +K + +S S
Sbjct: 400 SRSPLSLHRLLHLIWNHAKHLAGYEQQDAHEFFIATLDVLHRHCVKAKAEHDSKSNSSGS 459
Query: 224 ---------------SQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVG 268
Q + I+ ++F G L S + C C S TY+P D+SL++ +
Sbjct: 460 GSGTNSSNSSSSHCYGQCNCIIDQIFTGMLQSDVVCQACNGVSTTYDPFWDISLDLGETT 519
Query: 269 SLGSA--------LESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKR 320
+ G LE +T+ E + K C CK KQ L +PSV +FHLKR
Sbjct: 520 THGGVTPKTLIDCLERYTRAEHL-GSAAKIKCSTCKSYQESTKQFSLRTLPSVVSFHLKR 578
Query: 321 FKTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSY 380
F+ KI ++FP+E D+ P+ S +N+ + ++ LYA+V H+G+ T GHY +Y
Sbjct: 579 FEHSALIDRKISSFIQFPVEFDMTPFMSEKKNAYGDFRFSLYAVVNHVGTIDT-GHYTAY 637
Query: 381 IRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
+R DTW + +D +T + VL + Y+LFY K E+
Sbjct: 638 VRHQKDTWVKCDDHVITMASLKQVLDSEGYLLFYHKNVLEY 678
>gi|402914074|ref|XP_003919460.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 51-like [Papio
anubis]
Length = 756
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 114/355 (32%), Positives = 170/355 (47%), Gaps = 52/355 (14%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q TH +PL++ D + C + C++C + +
Sbjct: 409 GLINLGNTCFMNCIVQALTH-IPLLKDFFLSDKHK-CIMTSPSLCLVCEMSSLFHAMYSG 466
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDN 228
S P KL+ + + Y+Q+DAHEFL +LD L +KD+S + +N
Sbjct: 467 SRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLHR-----HSKDDSGVQEANN 521
Query: 229 ------IVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE------------------- 263
I+ ++F G L S + C C S S T +P D+SL+
Sbjct: 522 PNCCNCIIDQIFTGGLQSDVTCQACHSVSTTIDPCWDISLDLPGSCATFDSQNPERADGT 581
Query: 264 ------IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFH 317
I + SL L+ FT+ E + K C C+ KQL + K+P VA FH
Sbjct: 582 VSRDHHIPGIPSLTDCLQWFTRPEHL-GSSAKIKCNSCQSYQESTKQLTMKKLPIVACFH 640
Query: 318 LKRFKTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV------------ELKYHLYAIV 365
LKRF+ G KI+ + FPLELD+ P+ + + S + E KY L+A++
Sbjct: 641 LKRFEHVGKQRRKINTFISFPLELDMTPFLASTKESRMKEGQPPADCVPNENKYSLFAVI 700
Query: 366 EHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTE 420
H G+ + GHY S+IR D W +D+ +T+ E +L + Y+LFY KQG E
Sbjct: 701 NHHGTLES-GHYTSFIRQQKDQWFSCDDAIITKATIEDLLYSEGYLLFYHKQGLE 754
>gi|109132984|ref|XP_001100790.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 51 isoform 1
[Macaca mulatta]
gi|109132986|ref|XP_001100883.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 51 isoform 2
[Macaca mulatta]
Length = 710
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 114/355 (32%), Positives = 170/355 (47%), Gaps = 52/355 (14%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q TH +PL++ D + C + C++C + +
Sbjct: 363 GLINLGNTCFMNCIVQALTH-IPLLKDFFLSDKHK-CIMTSPSLCLVCEMSSLFHAMYSG 420
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDN 228
S P KL+ + + Y+Q+DAHEFL +LD L +KD+S + +N
Sbjct: 421 SRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLHR-----HSKDDSGVQEANN 475
Query: 229 ------IVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE------------------- 263
I+ ++F G L S + C C S S T +P D+SL+
Sbjct: 476 PNCCNCIIDQIFTGGLQSDVTCQACHSVSTTIDPCWDISLDLPGSCATFDSQNPERADGT 535
Query: 264 ------IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFH 317
I + SL L+ FT+ E + K C C+ KQL + K+P VA FH
Sbjct: 536 VSRDDHIPGIPSLTDCLQWFTRPEHL-GSSAKIKCNSCQSYQESTKQLTMKKLPIVACFH 594
Query: 318 LKRFKTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV------------ELKYHLYAIV 365
LKRF+ G KI+ + FPLELD+ P+ + + S + E KY L+A++
Sbjct: 595 LKRFEHVGKQRRKINTFISFPLELDMTPFLASTKESRMKEGQPPADCVPNENKYSLFAVI 654
Query: 366 EHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTE 420
H G+ + GHY S+IR D W +D+ +T+ E +L + Y+LFY KQG E
Sbjct: 655 NHHGTLES-GHYTSFIRQQKDQWFSCDDAIITKATIEDLLYSEGYLLFYHKQGLE 708
>gi|340721026|ref|XP_003398928.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Bombus
terrestris]
Length = 541
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 133/413 (32%), Positives = 200/413 (48%), Gaps = 56/413 (13%)
Query: 55 KDQNNDDDD-----DYEEIYRDTRPISSSYGRYNW-GSSLLSRPVEKHWPIQIKPTGVGA 108
+ +N+DD+D E + R+ RP ++ ++ G+S +RP K +I
Sbjct: 127 RRENSDDNDADALWKAEVVVRNLRPRTARKRLHSLDGTSGDNRPATKRRSSKITKEKKVV 186
Query: 109 GLENLGNTCFINAILQCFTHT---------LPLVQALRSFDHPRPCDG--ATEG----FC 153
GL NLGNTCF+N +LQ F + +P ++ + FD P G T G F
Sbjct: 187 GLRNLGNTCFMNVVLQSFNNISHFCEYLTQMPCLEGI-PFDEPPTHRGRIVTPGRAKEFM 245
Query: 154 VICALRDHIELSL------ASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDR 207
L + + L S+G+ +SP L + + F+ YQQ+DAHEFL +LDR
Sbjct: 246 SDALLAEELRKVLLGLNLGGSNGQAISPECLFLVIWKVVPRFRGYQQQDAHEFLTYMLDR 305
Query: 208 LESCCLD--SKTKDESLSSQG-DNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEI 264
L + L + E L +G +IV VFGG L+S + C NC + S T+EP DLSL+I
Sbjct: 306 LHTELLQLLPRLGHEPLGLRGKQSIVTAVFGGTLLSVVHCMNCRTDSKTHEPFQDLSLDI 365
Query: 265 -----------EDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSV 313
E+V SL +L F K+E++ D E F C+ C + K+ + ++P+V
Sbjct: 366 PDRLQRRTKEQEEVCSLTYSLTRFFKVEELADSELYF-CDNCMGKQRSTKRFWIHRLPNV 424
Query: 314 AAFHLKRFKTDGSYVVKIDKHVEFPLE-LDLKPYTS--------GGQNSDVELKYHLYAI 364
H+KRF+ SY K+D V+FP++ LD+ +T G NS + Y L A+
Sbjct: 425 LCLHIKRFRWCNSYRSKVDTQVDFPMKSLDMSAFTVRGVSGTKLGASNSHL---YDLAAV 481
Query: 365 VEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQ 417
+ H GS GHY ++ W NDS V + V YILFY ++
Sbjct: 482 IVHHGSGAGTGHYTAFAVHD-GQWFHFNDSSVRPATTDAVAKCKPYILFYVRK 533
>gi|321479440|gb|EFX90396.1| hypothetical protein DAPPUDRAFT_39928 [Daphnia pulex]
Length = 447
Score = 168 bits (426), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 96/313 (30%), Positives = 160/313 (51%), Gaps = 7/313 (2%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAG+ N+GNTC++N+ LQ H L L S + CD CV+C + ++ +
Sbjct: 132 VGAGMINMGNTCYMNSTLQALFHVPSLSNWLSSVRQCKNCDPNGSQLCVVCIIAKTLQST 191
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDS--KTKDESLS 223
SG V+ P + + L I +QEDAHEF++ L++ +E L S TK +S S
Sbjct: 192 HDKSGSVIKPILVYNRLKLICKHLVHGRQEDAHEFMRYLMEAMEKAYLQSVGGTKLDSRS 251
Query: 224 SQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKI 283
+ N + ++FGG + +++ C C S T++ D+ L+I+ +L AL + + E++
Sbjct: 252 KE-TNPLGQIFGGYIRTEVTCLKCKHTSTTFQHFQDIPLDIQHASTLDDALGHYFRRERL 310
Query: 284 EDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDL 343
E + + CEKCK +V K+ +++ P+V LKRF G K+ KH++F L+L
Sbjct: 311 EG-DNAYKCEKCKSKVPATKKFSIERAPNVLCIQLKRFGLMGG---KMSKHIQFSRNLNL 366
Query: 344 KPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
+ + + Y +++ HMG S CGHY + +S + +D V +
Sbjct: 367 NRFLFHQSSGGPCVTYKFVSLINHMGPSQHCGHYTAIAEASNGQLYLFDDCSVRLISLNV 426
Query: 404 VLSQDAYILFYAK 416
+S AY+L Y K
Sbjct: 427 AMSTGAYVLIYEK 439
>gi|350404719|ref|XP_003487196.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Bombus
impatiens]
Length = 541
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 133/413 (32%), Positives = 200/413 (48%), Gaps = 56/413 (13%)
Query: 55 KDQNNDDDD-----DYEEIYRDTRPISSSYGRYNW-GSSLLSRPVEKHWPIQIKPTGVGA 108
+ +N+DD+D E + R+ RP ++ ++ G+S +RP K +I
Sbjct: 127 RRENSDDNDADALWKAEVVVRNLRPRTARKRLHSLDGTSGDNRPTTKRRSSKITKEKKVV 186
Query: 109 GLENLGNTCFINAILQCFTHT---------LPLVQALRSFDHPRPCDG--ATEG----FC 153
GL NLGNTCF+N +LQ F + +P ++ + FD P G T G F
Sbjct: 187 GLRNLGNTCFMNVVLQSFNNISHFCEYLTQMPCLEGI-PFDEPPTHRGRIVTPGRAKEFM 245
Query: 154 VICALRDHIELSL------ASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDR 207
L + + L S+G+ +SP L + + F+ YQQ+DAHEFL +LDR
Sbjct: 246 SDALLAEELRKVLLGLNLGGSNGQAISPECLFLVIWKVVPRFRGYQQQDAHEFLTYMLDR 305
Query: 208 LESCCLD--SKTKDESLSSQG-DNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEI 264
L + L + E L +G +IV VFGG L+S + C NC + S T+EP DLSL+I
Sbjct: 306 LHTELLQLLPRLGHEPLGLRGKQSIVTAVFGGTLLSVVHCMNCRTDSKTHEPFQDLSLDI 365
Query: 265 -----------EDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSV 313
E+V SL +L F K+E++ D E F C+ C + K+ + ++P+V
Sbjct: 366 PDRLQRRTKEQEEVCSLTYSLTRFFKVEELADSELYF-CDNCMGKQRSTKRFWIHRLPNV 424
Query: 314 AAFHLKRFKTDGSYVVKIDKHVEFPLE-LDLKPYTS--------GGQNSDVELKYHLYAI 364
H+KRF+ SY K+D V+FP++ LD+ +T G NS + Y L A+
Sbjct: 425 LCLHIKRFRWCNSYRSKVDTQVDFPMKSLDMSAFTVRGVSGTKLGASNSHL---YDLAAV 481
Query: 365 VEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQ 417
+ H GS GHY ++ W NDS V + V YILFY ++
Sbjct: 482 IVHHGSGAGTGHYTAFAVHD-GQWFHFNDSSVRPATTDAVAKCKPYILFYVRK 533
>gi|297603462|ref|NP_001054070.2| Os04g0647300 [Oryza sativa Japonica Group]
gi|255675832|dbj|BAF15984.2| Os04g0647300, partial [Oryza sativa Japonica Group]
Length = 591
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 109/370 (29%), Positives = 172/370 (46%), Gaps = 64/370 (17%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDH------------PRPCDGATEGFCVIC 156
GL NLGNTCF+N++LQ H PL H R + + C+ C
Sbjct: 212 GLNNLGNTCFMNSVLQALLHAPPLRNYFLGDRHNRYLCPRQTPMRRRSAEANDKAACLAC 271
Query: 157 ALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSK 216
L + + + SP K + + +S Y+Q+DAHEF +LD + D +
Sbjct: 272 DLDEIYSAAFSGERTPYSPAKFLYSWWQHASNLASYEQQDAHEFFISILDHIHENIKDDQ 331
Query: 217 TKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE----------- 265
K + I RVF G L S + C +CG S T+EP +D+SL+++
Sbjct: 332 HKSLAQGHGDCCIAHRVFSGILRSDVTCTHCGFTSTTFEPCMDISLDLDAGYNNSLGVAN 391
Query: 266 -----------------DVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLD 308
V +L LE FT+ E++ D E KF CE+CKE+ KQ+ +
Sbjct: 392 PKVHVRNGERSSGGTNTKVSTLMRCLERFTRAERL-DAEQKFFCERCKERQESLKQMSIR 450
Query: 309 KVPSVAAFHLKRFKTDGSYVV--KIDKHVEFPLELDLKPYTSGG---------------- 350
++P V+ FH+KRF+ + K+D ++FP LD+ PY S
Sbjct: 451 RLPLVSCFHIKRFEHSSVKKMSRKVDHCLQFPFSLDMAPYLSSSILRSRFGNRIFPSEAS 510
Query: 351 ---QNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQ 407
S+ ++ ++A++ H G GHY +Y+R + + W++ +D+ VTRVEE V +
Sbjct: 511 DADSVSEFSSEFEIFAVIMHSGKL-EAGHYVTYLRLN-NHWYKCDDAWVTRVEEHTVRTS 568
Query: 408 DAYILFYAKQ 417
AY+LFY ++
Sbjct: 569 QAYMLFYVQK 578
>gi|383854138|ref|XP_003702579.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Megachile
rotundata]
Length = 542
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 132/412 (32%), Positives = 201/412 (48%), Gaps = 57/412 (13%)
Query: 57 QNNDDDDDYEEIY------RDTRPISSSYGRYNW-GSSLLSRPVEKHWPIQIKPTGVGAG 109
+N+D+D+D + ++ R+ RP ++ ++ G+S +RP K +I G
Sbjct: 129 ENSDNDNDADALWKAEVVVRNLRPRTARKRLHSLDGTSGDNRPATKRRSSKITKEKKVVG 188
Query: 110 LENLGNTCFINAILQCFTHT---------LPLVQALRSFDHPRPCDG--ATEG----FCV 154
L NLGNTCF+N +LQ F + +P ++ + FD P G T G F
Sbjct: 189 LRNLGNTCFMNVVLQSFNNISHFCEYLTQMPCLEGI-PFDEPPTHRGRIVTPGRAKEFMN 247
Query: 155 ICALRDHIELSL------ASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRL 208
L + + L S+G+ +SP L + + F+ YQQ+DAHEFL +LDRL
Sbjct: 248 DALLAEELRKVLLGLNLGGSNGQAISPECLFLVIWKVVPRFRGYQQQDAHEFLTYMLDRL 307
Query: 209 ESCCLD--SKTKDESLSSQG-DNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEI- 264
+ L + E L +G +IV VFGG L+S + C NC + S T+EP DLSL+I
Sbjct: 308 HTELLQLLPRLGHEPLGLRGKQSIVTAVFGGTLLSVVHCMNCRTDSKTHEPFQDLSLDIP 367
Query: 265 ----------EDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVA 314
E+V SL +L F K+E++ D E F C+ C + K+ + ++P+V
Sbjct: 368 DRLQRRTKEQEEVCSLTYSLSRFFKVEELADSELYF-CDNCMGKQRSTKRFWIHRLPNVL 426
Query: 315 AFHLKRFKTDGSYVVKIDKHVEFPLE-LDLKPYTS--------GGQNSDVELKYHLYAIV 365
H+KRF+ SY K+D V+FP++ LD+ +T G NS + Y L A++
Sbjct: 427 CLHIKRFRWCNSYRSKVDTQVDFPMKSLDMSAFTVRGMTGTKLGASNSHL---YDLAAVI 483
Query: 366 EHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQ 417
H GS GHY ++ W NDS V + V YILFY ++
Sbjct: 484 VHHGSGAGTGHYTAFA-VHDGQWFHFNDSSVRPATTDAVAKCKPYILFYVRK 534
>gi|355570597|gb|EHH25672.1| hypothetical protein EGK_21141 [Macaca mulatta]
Length = 635
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 114/355 (32%), Positives = 170/355 (47%), Gaps = 52/355 (14%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q TH +PL++ D + C + C++C + +
Sbjct: 288 GLINLGNTCFMNCIVQALTH-IPLLKDFFLSDKHK-CIMTSPSLCLVCEMSSLFHAMYSG 345
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDN 228
S P KL+ + + Y+Q+DAHEFL +LD L +KD+S + +N
Sbjct: 346 SRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLHR-----HSKDDSGVQEANN 400
Query: 229 ------IVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE------------------- 263
I+ ++F G L S + C C S S T +P D+SL+
Sbjct: 401 PNCCNCIIDQIFTGGLQSDVTCQACHSVSTTIDPCWDISLDLPGSCATFDSQNPERADGT 460
Query: 264 ------IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFH 317
I + SL L+ FT+ E + K C C+ KQL + K+P VA FH
Sbjct: 461 VSRDDHIPGIPSLTDCLQWFTRPEHL-GSSAKIKCNSCQSYQESTKQLTMKKLPIVACFH 519
Query: 318 LKRFKTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV------------ELKYHLYAIV 365
LKRF+ G KI+ + FPLELD+ P+ + + S + E KY L+A++
Sbjct: 520 LKRFEHVGKQRRKINTFISFPLELDMTPFLASTKESRMKEGQPPADCVPNENKYSLFAVI 579
Query: 366 EHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTE 420
H G+ + GHY S+IR D W +D+ +T+ E +L + Y+LFY KQG E
Sbjct: 580 NHHGTLES-GHYTSFIRQQKDQWFSCDDAIITKATIEDLLYSEGYLLFYHKQGLE 633
>gi|302854895|ref|XP_002958951.1| hypothetical protein VOLCADRAFT_70119 [Volvox carteri f.
nagariensis]
gi|300255697|gb|EFJ39986.1| hypothetical protein VOLCADRAFT_70119 [Volvox carteri f.
nagariensis]
Length = 252
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 106/310 (34%), Positives = 149/310 (48%), Gaps = 58/310 (18%)
Query: 107 GAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSL 166
GAG NLGNTCF+N++ L++ H P L
Sbjct: 1 GAGYHNLGNTCFMNSV-------------LQALAHTPP---------------------L 26
Query: 167 ASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQG 226
A F+ +QED+HEFL+CLLD + CL
Sbjct: 27 AE--------------------FRLGRQEDSHEFLRCLLDAMHEACLKRFKPKPPPELAA 66
Query: 227 DNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIEDP 286
V R+FGG L S+++C S TY+P +DLSLEI SL AL +FT E ++ P
Sbjct: 67 TTFVYRIFGGRLRSQIECEGVDYVSRTYDPFLDLSLEINRAQSLERALSAFTAPEVLDGP 126
Query: 287 ETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPY 346
K+ C K + V K++ +++ P+V H KRF+ G + KI+K V+F +LDL+PY
Sbjct: 127 -NKYRCPKNNKLVRAVKRISVEEAPNVLTVHFKRFEY-GGFGAKINKKVDFGTQLDLRPY 184
Query: 347 TSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLS 406
S + + Y LY ++ H G S GHY Y++++ WH +D RVT V E VL
Sbjct: 185 MSNVKGP--QQLYELYGVLVHHGYSVNSGHYICYVKAANGLWHVCDDHRVTAVGERTVLD 242
Query: 407 QDAYILFYAK 416
Q AYILFY +
Sbjct: 243 QRAYILFYVR 252
>gi|221512822|ref|NP_524140.2| non-stop [Drosophila melanogaster]
gi|220902639|gb|AAF49249.2| non-stop [Drosophila melanogaster]
Length = 496
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 164/341 (48%), Gaps = 32/341 (9%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLG TCF+N I+Q HT L S H C + C++C + + +
Sbjct: 159 GLLNLGATCFMNCIVQALVHTPLLSDYFMSDRHD--CGSKSSHKCLVCEVSRLFQEFYSG 216
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLS----- 223
S LS +L+ + + Y+Q+DAHEF LD L C+ +K + ES S
Sbjct: 217 SRSPLSLHRLLHLIWNHAKHLAGYEQQDAHEFFIATLDVLHRHCVKAKAEHESKSNSSGS 276
Query: 224 ---------------SQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVG 268
Q + I+ ++F G L S + C C S TY+P D+SL++ +
Sbjct: 277 GSGTNSSNSSSSHCYGQCNCIIDQIFTGMLQSDVVCQACNGVSTTYDPFWDISLDLGETT 336
Query: 269 SLGSA--------LESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKR 320
+ G LE +T+ E + K C CK KQ L +PSV +FHLKR
Sbjct: 337 THGGVTPKTLIDCLERYTRAEHL-GSAAKIKCSTCKSYQESTKQFSLRTLPSVVSFHLKR 395
Query: 321 FKTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSY 380
F+ KI ++FP+E D+ P+ S +N+ + ++ LYA+V H+G+ T GHY +Y
Sbjct: 396 FEHSALIDRKISSFIQFPVEFDMTPFMSEKKNAYGDFRFSLYAVVNHVGTIDT-GHYTAY 454
Query: 381 IRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
+R DTW + +D +T + VL + Y+LFY K E+
Sbjct: 455 VRHQKDTWVKCDDHVITMASLKQVLDSEGYLLFYHKNVLEY 495
>gi|443706691|gb|ELU02606.1| hypothetical protein CAPTEDRAFT_165719 [Capitella teleta]
Length = 515
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 116/352 (32%), Positives = 168/352 (47%), Gaps = 45/352 (12%)
Query: 108 AGLENLGNTCFINAILQCFTHTLPL---VQALRSFDHP--------RPCDGATEGFCVIC 156
+GL NLGNTCF+NA+LQ ++ +Q L S + R C + F V+
Sbjct: 152 SGLRNLGNTCFMNAVLQSLSNIQTFCGYIQQLPSLEQKMSKKKITTRSCTEGNDVF-VVE 210
Query: 157 ALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSK 216
LR + S +SP L + + F+ YQQ+DAHEF++ LLDRL + +
Sbjct: 211 ELRKTLVALWQGSKAAISPESLFSVIWKVVPRFRGYQQQDAHEFMRYLLDRLHTELMTLI 270
Query: 217 TKDESLSSQG---------DNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEI--- 264
+ ++ ++V +FGG L S++ C CG S ++P +D+SL+I
Sbjct: 271 PYNATVRPNSPYVGSPLGKSSVVTAIFGGILQSEVNCLICGMESKKHDPFLDISLDIPSK 330
Query: 265 -----------EDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSV 313
E V L L SFT +E++ED E + C CK + K+ + ++P+V
Sbjct: 331 FTCKTPNPKNGEIVCDLSDCLSSFTDVEELEDTEL-YMCANCKCRQRSTKKFWIRRLPNV 389
Query: 314 AAFHLKRFKTDGSYVVKIDKHVEFPLE--------LDLKPYTSGGQNSDVELKYHLYAIV 365
HLKRF+ VK+D H+ FPL LD T S + KY L A+V
Sbjct: 390 LCLHLKRFRWSTYLRVKVDTHINFPLRGLEMNHFMLDNLHETRNSSASGSQSKYDLAAVV 449
Query: 366 EHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQ 417
H GS GHY SY W+ NDS VT+ +EE V AYILFY ++
Sbjct: 450 VHHGSGAGSGHYTSYA-VHEGGWYHFNDSSVTQCDEETVAKCKAYILFYVRR 500
>gi|196001277|ref|XP_002110506.1| hypothetical protein TRIADDRAFT_22897 [Trichoplax adhaerens]
gi|190586457|gb|EDV26510.1| hypothetical protein TRIADDRAFT_22897 [Trichoplax adhaerens]
Length = 477
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 114/338 (33%), Positives = 169/338 (50%), Gaps = 32/338 (9%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSF-----------DHPRPCDGATEGFCVICA 157
GL+NLGNTC++NAILQ ++ P + ++F H + C++
Sbjct: 142 GLKNLGNTCYLNAILQSLSNIDPFCRYFKTFRSLTDSDPRKEKHAHNTRAQGDNVCIVDE 201
Query: 158 LRDHIE-LSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSK 216
LR ++ L SS SP + + + F+ Y Q+DAHEF++ LLDRL + +
Sbjct: 202 LRKVLDGLGEISSSSYYSPNSFLTAICKLIPRFRGYHQQDAHEFMRYLLDRLHTELGRMR 261
Query: 217 TKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEI---------EDV 267
+ IV +F G L++++ C C S + +DLSL+I + +
Sbjct: 262 APYYGNKQVSNTIVTTLFRGSLLNEVNCLVCDINSRKTDSFLDLSLDIPSEFISRRNKSI 321
Query: 268 G-------SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKR 320
G L L SFT+LEK+ED E + C C ++ KQL + +P V HLKR
Sbjct: 322 GDNDISICKLTDCLSSFTELEKLEDSEL-YYCSSCTKKQLSTKQLRIKTLPRVLCLHLKR 380
Query: 321 FKTDGSYVVKIDKHVEFPL-ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFS 379
F+ K+D +VEFP+ LD+KPY + Q S+ Y L A+VEH GS GHY +
Sbjct: 381 FRWSSCIRKKLDIYVEFPMIGLDMKPYLTLKQTSNGRSMYDLIAVVEHHGSGYGSGHYTA 440
Query: 380 YIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQ 417
Y + D W+ NDS V+ EE V+ AYILFY ++
Sbjct: 441 Y--AYKDGWYHFNDSTVSVAMEEHVIKCKAYILFYVQR 476
>gi|242049526|ref|XP_002462507.1| hypothetical protein SORBIDRAFT_02g026980 [Sorghum bicolor]
gi|241925884|gb|EER99028.1| hypothetical protein SORBIDRAFT_02g026980 [Sorghum bicolor]
Length = 867
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 101/313 (32%), Positives = 171/313 (54%), Gaps = 14/313 (4%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGN+C+ N +LQC T PL L H + C + +C +C L + + +
Sbjct: 355 GLYNLGNSCYANVVLQCLAFTRPLTAYLLEGHHSQNC--SKNEWCFMCEL-EKVLIEGKH 411
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKD--ESLSSQG 226
++SP ++ +LN I F +EDAHEFL+ +D+++S + K+ + L+ +
Sbjct: 412 GKSLVSPTGILCHLNEIGVSFGHGAEEDAHEFLRYAIDKMQSASIKEAKKNGIQQLAEE- 470
Query: 227 DNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE-DVGSLGSALESFTKLEKIED 285
+V +FGG L SK++C C S E ++DL++EI+ D+ +L AL FT E + D
Sbjct: 471 TTLVHFIFGGYLRSKIKCTKCQVSSKQSERILDLTVEIDGDINTLDGALRRFTSSE-VLD 529
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
+ ++ C +C +K+L + + P++ LKR+++ + + K V+FP L+L
Sbjct: 530 GDNRYHCSRCNSYERAQKKLTILEAPNILTIALKRYQS--GVLGETSKVVKFPEHLNLSQ 587
Query: 346 YTSGGQNSDVELKYHLYAIVEH--MGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
Y S + D Y LYA+V H + ++ GHY Y++ S WH ++D++V V +
Sbjct: 588 YMS--RTDDSSPVYTLYAVVVHHNVSNATVSGHYVCYVKDSQGKWHEMDDNKVKPVSIQK 645
Query: 404 VLSQDAYILFYAK 416
VLS+ AY+L YA+
Sbjct: 646 VLSKCAYMLLYAR 658
>gi|194871335|ref|XP_001972828.1| GG15734 [Drosophila erecta]
gi|190654611|gb|EDV51854.1| GG15734 [Drosophila erecta]
Length = 496
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/341 (31%), Positives = 163/341 (47%), Gaps = 32/341 (9%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLG TCF+N I+Q HT L S H C + C++C + + +
Sbjct: 159 GLLNLGATCFMNCIVQALVHTPLLSDYFMSDRHD--CGSKSSPKCLVCEVSRLFQEFYSG 216
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES------- 221
S LS +L+ + + Y+Q+DAHEF LD L C+ +K + +S
Sbjct: 217 SRSPLSLHRLLHLIWNHAKHLAGYEQQDAHEFFIATLDVLHRHCVKAKAEHDSKSNSSGT 276
Query: 222 -------------LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVG 268
Q + I+ ++F G L S + C C S TY+P D+SL++ +
Sbjct: 277 GSGTNSSNSSSSHCYGQCNCIIDQIFTGMLQSDVVCQACNGVSTTYDPFWDISLDLGETT 336
Query: 269 SLGSA--------LESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKR 320
+ G LE +T+ E + K C CK KQ L +PSV +FHLKR
Sbjct: 337 THGGVTPKTLIDCLERYTRAEHL-GSAAKIKCSTCKSYQESTKQFSLRTLPSVVSFHLKR 395
Query: 321 FKTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSY 380
F+ KI ++FP+E D+ P+ S +N+ + ++ LYA+V H+G+ T GHY +Y
Sbjct: 396 FEHSALIDRKISSFIQFPVEFDMTPFMSEKKNAYGDFRFSLYAVVNHVGTIDT-GHYTAY 454
Query: 381 IRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
+R DTW + +D +T + VL + Y+LFY K E+
Sbjct: 455 VRHQKDTWVKCDDHVITMASLKQVLDSEGYLLFYHKNVLEY 495
>gi|426396114|ref|XP_004064300.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 51-like [Gorilla
gorilla gorilla]
Length = 469
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 114/355 (32%), Positives = 170/355 (47%), Gaps = 52/355 (14%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q TH +PL++ D + C + C++C + +
Sbjct: 122 GLINLGNTCFMNCIVQALTH-IPLLKDFFLSDKHK-CIMTSPSLCLVCEMSSLFHAMYSG 179
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDN 228
S P KL+ + + Y+Q+DAHEFL +LD L +KD+S + +N
Sbjct: 180 SRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLHR-----HSKDDSGGQEANN 234
Query: 229 ------IVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE------------------- 263
I+ ++F G L S + C C S S T +P D+SL+
Sbjct: 235 PNCCNCIIDQIFTGGLQSDVTCQACHSVSTTIDPCWDISLDLPGSCATFDSQNPERADST 294
Query: 264 ------IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFH 317
I + SL L+ FT+ E + K C C+ KQL + K+P VA FH
Sbjct: 295 VSRDDHIPGIPSLTDCLQWFTRPEHL-GSSAKIKCNSCQSYQESTKQLTMKKLPIVACFH 353
Query: 318 LKRFKTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV------------ELKYHLYAIV 365
LKRF+ G KI+ + FPLELD+ P+ + + S + E KY L+A++
Sbjct: 354 LKRFEHVGKQRRKINTFISFPLELDMTPFLASTKESRMKEGQPPTDCVPNENKYSLFAVI 413
Query: 366 EHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTE 420
H G+ + GHY S+IR D W +D+ +T+ E +L + Y+LFY KQG E
Sbjct: 414 NHHGTLES-GHYTSFIRQQKDQWFSCDDAIITKATIEDLLYSEGYLLFYHKQGLE 467
>gi|357153956|ref|XP_003576621.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like
[Brachypodium distachyon]
Length = 959
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/325 (32%), Positives = 172/325 (52%), Gaps = 23/325 (7%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCD-------------GATEGFCVI 155
GL NLGN+C++NA+LQC T PL L H + C + + +C +
Sbjct: 408 GLCNLGNSCYVNAVLQCLAFTRPLTAYLFEGLHSKKCKLMLNFYSMCYTAFCSKKEWCFL 467
Query: 156 CALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDS 215
C I A LSP ++ +L+ I S F ++EDAHEFL+ +D ++ +
Sbjct: 468 CEFEKLIVEGKAGKSP-LSPTGILSHLHDIGSSFGLGKEEDAHEFLRYAIDTIQRASMKE 526
Query: 216 KTKDE-SLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE-DVGSLGSA 273
K+ ++ ++Q +FGG + S+++C C S E ++DL++EI+ D+ +L A
Sbjct: 527 AEKNGVGKLAEETTLMQLMFGGFVRSQIKCTKCQVSSGQCERILDLTVEIDGDISTLEEA 586
Query: 274 LESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDK 333
L FT E + D + K+ C +C +K+L + + P++ LKR++T S KI+K
Sbjct: 587 LHQFTSTE-VLDGDNKYHCSRCNSYERAKKKLTIYEAPNILTIALKRYQTGSS--GKINK 643
Query: 334 HVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEH--MGSSPTCGHYFSYIRSSPDTWHRL 391
+ FP L+L Y S +D Y LYA+V H + ++ GHY Y++ S + WH +
Sbjct: 644 AISFPECLNLSSYMS--TTNDYSPVYRLYAVVVHHDVQNAAFSGHYVCYVKDSHEKWHEM 701
Query: 392 NDSRVTRVEEEFVLSQDAYILFYAK 416
+D +V V E VL++ AY+LFYA+
Sbjct: 702 DDRQVKSVSLEKVLTKCAYMLFYAR 726
>gi|390363573|ref|XP_781718.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3
[Strongylocentrotus purpuratus]
Length = 503
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/339 (32%), Positives = 172/339 (50%), Gaps = 34/339 (10%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVI---------CALR 159
GL NLGNTCF+NA+LQ ++ + G T G + +L
Sbjct: 146 GLRNLGNTCFMNAVLQSLSNINQFCGYFKDLPAVELRSGKTAGKRIYNTRNMKHDDVSLV 205
Query: 160 DHIELSLASSGK----VLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDS 215
+ I +L + + +SP L + I F+ YQQ+DAHEF++ LLDRL + S
Sbjct: 206 EEIRKTLCALWQGDQTAISPDSLFTVMWKIFPRFRGYQQQDAHEFMRYLLDRLHTELQGS 265
Query: 216 K--TKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIED------- 266
T + ++ IV +FGG L+S++ C CGS +P +D+SL+I +
Sbjct: 266 TWPTTPKKQTNGHATIVSVIFGGLLLSEVTCRPCGSLYKKIDPFLDVSLDIPERFRPRSK 325
Query: 267 ------VGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKR 320
V L ++SF +E++E+ E ++ C KC+++ K+ L +P+V HLKR
Sbjct: 326 NKDGSQVCRLQDCMQSFIAVEELEETE-QYMCPKCQQRQPSTKKFWLKAIPNVLCIHLKR 384
Query: 321 FKTDGSYVVKIDKHVEFPLE-LDLKPYTSGGQNSDVELK---YHLYAIVEHMGSSPTCGH 376
F G KID +V+FP++ LD++P+ G + D + Y L A++ H GS GH
Sbjct: 385 FTWSGFLRTKIDTYVQFPMKGLDIQPFMLGPECQDENVSTTVYDLAAVIVHQGSGAGAGH 444
Query: 377 YFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYA 415
Y ++ ++ W+ NDS VT VEE+ + AYILFY
Sbjct: 445 YIAFAVNN-GQWYCFNDSTVTPVEEKVITRCKAYILFYV 482
>gi|90399346|emb|CAH68425.1| H0811D08.10 [Oryza sativa Indica Group]
Length = 562
Score = 167 bits (422), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 109/370 (29%), Positives = 172/370 (46%), Gaps = 64/370 (17%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDH------------PRPCDGATEGFCVIC 156
GL NLGNTCF+N++LQ H PL H R + + C+ C
Sbjct: 183 GLNNLGNTCFMNSVLQALLHAPPLRNYFLGDRHNRYLCPRQTPMRRRSAEANDKAACLAC 242
Query: 157 ALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSK 216
L + + + SP K + + +S Y+Q+DAHEF +LD + D +
Sbjct: 243 DLDEIYSAAFSGERTPYSPAKFLYSWWQHASNLASYEQQDAHEFFISILDHIHENIKDDQ 302
Query: 217 TKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE----------- 265
K + I RVF G L S + C +CG S T+EP +D+SL+++
Sbjct: 303 HKSHAQGHGDCCIAHRVFSGILRSDVTCTHCGFTSTTFEPCMDISLDLDAGYNNSLGVAN 362
Query: 266 -----------------DVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLD 308
V +L LE FT+ E++ D E KF CE+CKE+ KQ+ +
Sbjct: 363 PKVHVRNGERSSGGTNTKVSTLMRCLERFTRAERL-DAEQKFFCERCKERQESLKQMSIR 421
Query: 309 KVPSVAAFHLKRFKTDGSYVV--KIDKHVEFPLELDLKPYTSGG---------------- 350
++P V+ FH+KRF+ + K+D ++FP LD+ PY S
Sbjct: 422 RLPLVSCFHIKRFEHSSVKKMSRKVDHCLQFPFSLDMAPYLSSSILRSRFGNRIFPSEAS 481
Query: 351 ---QNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQ 407
S+ ++ ++A++ H G GHY +Y+R + + W++ +D+ VTRVEE V +
Sbjct: 482 DADSVSEFSSEFEIFAVIMHSGKLEA-GHYVTYLRLN-NHWYKCDDAWVTRVEEHTVRTS 539
Query: 408 DAYILFYAKQ 417
AY+LFY ++
Sbjct: 540 QAYMLFYVQK 549
>gi|355704804|gb|EHH30729.1| hypothetical protein EGK_20499, partial [Macaca mulatta]
gi|355757363|gb|EHH60888.1| hypothetical protein EGM_18779, partial [Macaca fascicularis]
Length = 331
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 111/332 (33%), Positives = 165/332 (49%), Gaps = 27/332 (8%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT P+++ D R C+ + C++C + +
Sbjct: 1 GLINLGNTCFMNCIVQALTHT-PILRDFFLSDRHR-CEMPSPELCLVCEMSSLFRELYSG 58
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
+ P KL+ + + Y+Q+DAHEFL LD L C D K + + +
Sbjct: 59 NPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDDVGKAANNPNHCN 118
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE--------------IEDVGSLGSA 273
I+ ++F G L S + C C S T +P D+SL+ I + +L
Sbjct: 119 CIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGSWESSVNGESHIPGITTLTDC 178
Query: 274 LESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDK 333
L FT+ E + K C C+ KQL ++K+P VA FH KRF+ KI
Sbjct: 179 LRRFTRPEHL-GSSAKIKCGSCQSYQESTKQLTMNKLPVVACFHFKRFEHSAKQRRKITT 237
Query: 334 HVEFPLELDLKPY-----TSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTW 388
++ FPLELD+ P+ T+ G N E KY L+A+V H G+ + GHY S+IR D W
Sbjct: 238 YISFPLELDMTPFMASMPTNSGNN---ENKYSLFAVVNHQGTLES-GHYTSFIRHHKDQW 293
Query: 389 HRLNDSRVTRVEEEFVLSQDAYILFYAKQGTE 420
+ +D+ +T+ + VL + Y+LFY KQ E
Sbjct: 294 FKCDDAVITKASIKDVLDSEGYLLFYHKQVLE 325
>gi|332819099|ref|XP_001175011.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17 [Pan
troglodytes]
Length = 354
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 95/270 (35%), Positives = 152/270 (56%), Gaps = 15/270 (5%)
Query: 153 CVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCC 212
C++C ++ HI +L G V+ P + +++ F R +QEDAHEFL +D +E C
Sbjct: 16 CMLCTMQAHITRALHIPGHVIQPSQA------LAAGFHRGKQEDAHEFLMFTVDAMEKAC 69
Query: 213 LDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGS 272
L + E S+ ++ ++FGG S+++C +C SDT++P +D++L+I+ S+
Sbjct: 70 LPGHKQVEH-HSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQ 128
Query: 273 ALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK-TDGSYVVKI 331
ALE K E++ + E + C C ++ K L L V LKRF G+ K+
Sbjct: 129 ALEQLVKPEEL-NGENAYHCGLCLQRAPASKTLTLHTSAKVLILVLKRFSDVTGN---KL 184
Query: 332 DKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRL 391
K+V++P LD++PY S Q + L Y LYA++ H G S GHYFSY+++ W+++
Sbjct: 185 AKNVQYPECLDMQPYMS--QQNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKM 242
Query: 392 NDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
+D+ VT VLSQ AY+LFY Q +EW
Sbjct: 243 DDAEVTASSVTSVLSQQAYVLFYI-QKSEW 271
>gi|426358873|ref|XP_004046714.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Gorilla gorilla gorilla]
Length = 362
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 96/292 (32%), Positives = 161/292 (55%), Gaps = 16/292 (5%)
Query: 102 KPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDH 161
+P VGAGL+N+ NTC++NA LQC T+T PL + S +H + C C+IC ++ H
Sbjct: 74 RPAVVGAGLQNMENTCYVNASLQCLTYTPPLDNCMLSREHSQTCQ--RHKCCMICTMQAH 131
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES 221
I +L S G V+ P + +++ F+R QE+A EFL +D ++ L K
Sbjct: 132 ITWALHSLGHVIQPSQA------LAAGFRRGNQENAREFLMFTVDAMKKAFLPGH-KQVD 184
Query: 222 LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLE 281
S+ ++ ++FGG S+++C +C S+T++P +D++L+I+ S+ AL K E
Sbjct: 185 HHSKDTTLIHQIFGGYWRSQIKCLHCHGISETFDPYLDIALDIQAAQSVKQALGQLVKPE 244
Query: 282 KIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK-TDGSYVVKIDKHVEFPLE 340
++ + E + C C ++ K L L V LKRF G+ K+ K+V++P
Sbjct: 245 EL-NGENDYHCGLCLQRAPASKMLTLHTSAKVLILVLKRFSDVTGN---KLAKNVQYPEC 300
Query: 341 LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLN 392
+D++PY Q + L Y LYA++ H G S GHYFSY+++ W++++
Sbjct: 301 VDMQPYVY--QQNTGPLVYVLYAVLVHAGWSCHYGHYFSYVKAQEGQWYKMD 350
>gi|195591308|ref|XP_002085384.1| GD12336 [Drosophila simulans]
gi|194197393|gb|EDX10969.1| GD12336 [Drosophila simulans]
Length = 496
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 107/341 (31%), Positives = 164/341 (48%), Gaps = 32/341 (9%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLG TCF+N I+Q HT L S H C + C++C + + +
Sbjct: 159 GLLNLGATCFMNCIVQALVHTPLLSDYFMSDRHD--CGSKSSHKCLVCEVSRLFQEFYSG 216
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLS----- 223
S LS +L+ + + Y+Q+DAHEF LD L C+ +K + +S S
Sbjct: 217 SRSPLSLHRLLHLIWNHAKHLAGYEQQDAHEFFIATLDVLHRHCVKAKAEHDSKSNSSGS 276
Query: 224 ---------------SQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVG 268
Q + I+ ++F G L S + C C S TY+P D+SL++ +
Sbjct: 277 GSGTNSSNSSSSHCYGQCNCIIDQIFTGMLQSDVVCQACNGVSTTYDPFWDISLDLGETT 336
Query: 269 SLGSA--------LESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKR 320
+ G LE +T+ E + K C CK KQ L +PSV +FHLKR
Sbjct: 337 THGGVTPKTLIDCLERYTRAEHL-GSAAKIKCSTCKSYQESTKQFSLRTLPSVVSFHLKR 395
Query: 321 FKTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSY 380
F+ KI ++FP+E D+ P+ S +N+ + ++ LYA+V H+G+ T GHY +Y
Sbjct: 396 FEHSALIDRKISSFIQFPVEFDMTPFMSEKKNAYGDFRFSLYAVVNHVGTIDT-GHYTAY 454
Query: 381 IRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
+R DTW + +D +T + VL + Y+LFY K E+
Sbjct: 455 VRHQKDTWVKCDDHVITMASLKQVLDSEGYLLFYHKNVLEY 495
>gi|380013085|ref|XP_003690600.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Apis
florea]
Length = 542
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 137/420 (32%), Positives = 204/420 (48%), Gaps = 50/420 (11%)
Query: 43 PSNHPLTLTDLDKDQNNDDDDDYEEIYRDTRPISSSYGRYNW-GSSLLSRPVEKHWPIQI 101
PS P + + +D + D E + R+ RP ++ ++ G+S +RP K +I
Sbjct: 120 PSTTPSSRRENSEDNDADALWKAEVVVRNLRPRTARKRLHSLDGTSGDNRPATKRRSSKI 179
Query: 102 --KPTGVGAGLENLGNTCFINAILQCFTHT---------LPLVQALRSFDHPRPCDG--A 148
K V GL NLGNTCF+N +LQ F + +P ++ + FD P G
Sbjct: 180 TSKEKKV-VGLRNLGNTCFMNVVLQSFNNISHFCEYLTQMPCLEGI-PFDEPPTHRGRIV 237
Query: 149 TEG----FCVICALRDHIELSL------ASSGKVLSPRKLVDNLNYISSFFQRYQQEDAH 198
T G F L + + L S+G+ +SP L + + F+ YQQ+DAH
Sbjct: 238 TPGRAKEFMSDALLAEELRKVLLGLNLGGSNGQAISPECLFLVIWKVVPRFRGYQQQDAH 297
Query: 199 EFLQCLLDRLESCCLD--SKTKDESLSSQG-DNIVQRVFGGCLISKLQCCNCGSCSDTYE 255
EFL +LDRL + L + E L +G +IV VFGG L+S + C NC + S T+E
Sbjct: 298 EFLTYMLDRLHTELLQLLPRLGHEPLGLRGKQSIVTAVFGGTLLSVVHCMNCRTDSKTHE 357
Query: 256 PLIDLSLEI-----------EDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQ 304
P DLSL+I E+V SL +L F K+E++ D E F C+ C + K+
Sbjct: 358 PFQDLSLDIPDRLQRRTKEQEEVCSLTYSLTRFFKVEELADSELYF-CDNCMGKQRSTKR 416
Query: 305 LMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE-LDLKPYTSGGQN------SDVEL 357
+ ++P+V H+KRF+ SY K+D V+FP++ LD+ +T G N S+ L
Sbjct: 417 FWIHRLPNVLCLHIKRFRWCNSYRSKVDTQVDFPMKSLDMSAFTVRGVNGTKLGASNSHL 476
Query: 358 KYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQ 417
Y L A++ H GS GHY ++ W NDS V + V YILFY ++
Sbjct: 477 -YDLAAVIVHHGSGAGTGHYTAFAVHD-GQWFHFNDSSVRPATTDAVAKCKPYILFYVRK 534
>gi|198466407|ref|XP_001353988.2| GA18001 [Drosophila pseudoobscura pseudoobscura]
gi|198150586|gb|EAL29724.2| GA18001 [Drosophila pseudoobscura pseudoobscura]
Length = 494
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 107/340 (31%), Positives = 165/340 (48%), Gaps = 32/340 (9%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLG TCF+N I+Q HT PL+ F R G + C++C + + +
Sbjct: 159 GLLNLGATCFMNCIVQALVHT-PLLSDY--FMSDRHDCGKSSHKCLVCEVSRLFQEFYSG 215
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES------- 221
S LS +L+ + + Y+Q+DAHEF LD L C+ +K + ES
Sbjct: 216 SRSPLSLHRLLHLIWNHAKHLAGYEQQDAHEFFIATLDVLHRHCVKAKAEHESKSNSSSS 275
Query: 222 ------------LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGS 269
Q + I+ ++F G L S + C C S T++P D+SL++ + +
Sbjct: 276 GSGTNSTSSSTSSYGQCNCIIDQIFTGMLQSDVVCQACKGVSTTFDPFWDISLDLGETTT 335
Query: 270 LGSA--------LESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRF 321
G LE +T+ E + K C CK KQ L +PSV +FHLKRF
Sbjct: 336 HGGVTPKTLIDCLERYTRAEHL-GSAAKIKCSTCKSYQESTKQFSLRTLPSVVSFHLKRF 394
Query: 322 KTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYI 381
+ KI ++FP+E D+ P+ S +N+ + ++ LYA+V H+G+ T GHY +Y+
Sbjct: 395 EHSALIDRKISSFIQFPVEFDMTPFMSEKKNAYGDFRFSLYAVVNHVGTIDT-GHYTAYV 453
Query: 382 RSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
R DTW + +D +T + VL + Y+LFY K E+
Sbjct: 454 RHQKDTWVKCDDHVITMASLKQVLDSEGYLLFYHKNVLEY 493
>gi|255083302|ref|XP_002504637.1| predicted protein [Micromonas sp. RCC299]
gi|226519905|gb|ACO65895.1| predicted protein [Micromonas sp. RCC299]
Length = 368
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 114/367 (31%), Positives = 174/367 (47%), Gaps = 58/367 (15%)
Query: 92 PVEKHWPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPC--DGAT 149
PV+ W + VG GL NLGN+CF+N+ILQ THT PL + + H C A
Sbjct: 15 PVDLRWTVGDDVPPVGRGLRNLGNSCFLNSILQALTHTAPLAKLCLARRHTANCALTNAR 74
Query: 150 EGFCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLE 209
E C C + H ++P ++ NL ++ F R +QEDAHE L+ L+ ++
Sbjct: 75 EP-CAFCIIERH----------AIAPEEVFGNLRLLARHFVRGRQEDAHELLRLSLEAMD 123
Query: 210 SCCLDSKTKDESLSS--QGDN----------------IVQRVFGGCLISKLQCCNCGSCS 251
CL + + + +G + V+R+F G + ++C CG S
Sbjct: 124 DSCLANCGRPSARRGGHRGQSSVVFDPETGARLAPPTAVERIFQGKFRNLVRCARCGHES 183
Query: 252 DTYEPLIDLSLEI---ED-------------------VGSLGSALESFTKLEKIEDPETK 289
TY+P +D+SLE+ ED GS+ SAL++FT+ E++E E
Sbjct: 184 KTYDPFLDVSLELPGREDRSSHGGGYGPGYLRGSGSARGSVESALKNFTEEERLEG-ENA 242
Query: 290 FTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPYTSG 349
+ CE+CK+ K+L + + P++ HLKRF Y KI+ V+F L L + S
Sbjct: 243 YRCERCKDLCPATKRLTIHEAPAILVVHLKRFD---HYGGKINSPVDFTERLTLGGHMS- 298
Query: 350 GQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDA 409
+ Y LYA+V H G+ Y + +S D W+ +DS V RV V + A
Sbjct: 299 EDAEEAGPAYRLYAMVTHSGNDAIASFYGAATNASDDEWYLCDDSSVRRVNRADVFDEQA 358
Query: 410 YILFYAK 416
Y+LFY +
Sbjct: 359 YVLFYER 365
>gi|307204808|gb|EFN83366.1| Ubiquitin carboxyl-terminal hydrolase 3 [Harpegnathos saltator]
Length = 550
Score = 166 bits (419), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 140/428 (32%), Positives = 203/428 (47%), Gaps = 60/428 (14%)
Query: 43 PSNHPLTLTDLDKDQNNDDDDDY---EEIYRDTRPISSSYGRYNW-GSSLLSRPVEKHWP 98
PS P + D D +NDD D E + R+ RP ++ + SS +RP K
Sbjct: 122 PSTTPSSRRD-DVGHDNDDPDALWKAEVVVRNLRPRTARKRLHALDASSADNRPATKRRS 180
Query: 99 IQIKPTGVGAGLENLGNTCFINAILQCFTHT---------LPLVQALRSFDH----PRPC 145
+ GL NLGNTCF+N +LQ F + +P ++ + +FD P
Sbjct: 181 SKSTKEKKVVGLRNLGNTCFMNVVLQSFNNISHFCEYLTQMPCLEGI-AFDEASLEPPTH 239
Query: 146 DG--ATEGFCVICALRDHI----------ELSLA-SSGKVLSPRKLVDNLNYISSFFQRY 192
G T G ++ D + LSL S+G+ +SP L + + F+ Y
Sbjct: 240 RGRIVTPGRAKEMSMSDALLAEELRKVLLGLSLGGSNGQAISPECLFLAIWKVVPRFRGY 299
Query: 193 QQEDAHEFLQCLLDRLESCCLD--SKTKDESLSSQG-DNIVQRVFGGCLISKLQCCNCGS 249
QQ+DAHEFL +LDRL + L + E +G +IV VFGG L+S + C NC +
Sbjct: 300 QQQDAHEFLTYMLDRLHTELLQLLPRLGHEPPGLRGKQSIVTAVFGGTLLSVVHCMNCRT 359
Query: 250 CSDTYEPLIDLSLEI-----------EDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQ 298
S T+EP DLSL+I E+V SL +L F K+E++ D E F C+ C +
Sbjct: 360 DSKTHEPFQDLSLDIPDRLQRRTKEQEEVCSLTYSLTRFFKVEELADSELYF-CDNCMGK 418
Query: 299 VSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE-LDLKPYTS--------G 349
K+ + ++P+V H+KRF+ SY K+D V+FP+E LD+ +T G
Sbjct: 419 QRSTKRFWIHRLPNVLCLHIKRFRWCNSYRSKVDTQVDFPMESLDMSAFTVRGMTGTRLG 478
Query: 350 GQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDA 409
QNS + Y L A++ H GS GHY ++ W NDS V E V
Sbjct: 479 AQNSHL---YDLAAVIVHHGSGAGTGHYTAFAVHD-GQWFHFNDSSVRPASTESVAKCKP 534
Query: 410 YILFYAKQ 417
YILFY ++
Sbjct: 535 YILFYVRK 542
>gi|449019625|dbj|BAM83027.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 500
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 103/326 (31%), Positives = 158/326 (48%), Gaps = 28/326 (8%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFD----HPRPCDGATEGFCVICALRDHIEL 164
GL NLGNTC+ NA++Q HT PLV L++ P G + L + +
Sbjct: 132 GLRNLGNTCYANAVIQALLHTPPLV--LKALSDGCASATPHTGFFDAMAAFVRLCRQLLV 189
Query: 165 SLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSS 224
S ++P +++ NL I ++ +QEDAHEFL+ LL+ + C S+ + L S
Sbjct: 190 VRPSGTNAVAPTEIIRNLPAICRRYRVGRQEDAHEFLRFLLESIARSC--SRRGERRLPS 247
Query: 225 Q--------------GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSL 270
Q G + R+FGG L S++ C C S E +DLSL+ S+
Sbjct: 248 QQVSSDELVASDCNHGTGWITRIFGGLLRSRVICRTCQHKSYRTERFLDLSLDFRQSASI 307
Query: 271 GSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVK 330
LE F E + ++ C C EKQ+ + + P V HLKRF + K
Sbjct: 308 SKCLEHFAATELLAG-RNRYDCAACHGYSDAEKQIRIRQAPVVLTLHLKRFHA----LRK 362
Query: 331 IDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHR 390
+ V F LDL+PY + + + Y L+A++ H G S + GHY++++RS+ W R
Sbjct: 363 LSGVVRFSEWLDLRPYMAE-EFVAGPVMYRLFAVIVHEGHSLSSGHYYAFVRSASGAWLR 421
Query: 391 LNDSRVTRVEEEFVLSQDAYILFYAK 416
+D ++RV V +Q AY+LFY +
Sbjct: 422 CDDEHLSRVGIGSVFAQQAYLLFYLR 447
>gi|414585137|tpg|DAA35708.1| TPA: hypothetical protein ZEAMMB73_275507 [Zea mays]
Length = 563
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 115/375 (30%), Positives = 174/375 (46%), Gaps = 64/375 (17%)
Query: 103 PTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPR-----------PCDGATEG 151
P G+ GL NLGNTCF+N++LQ H PL H R A
Sbjct: 180 PAGL-RGLNNLGNTCFMNSVLQALLHAPPLRNYFLGDRHNRFLCPRRTPVRHRASDADRV 238
Query: 152 FCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESC 211
C+ C L + + + SP K + + +S Y+Q+DAHEF +LD +
Sbjct: 239 ACLACDLDEIYSAAFSGDRTPYSPAKFLYSWWQHASNLASYEQQDAHEFFISILDHIHEN 298
Query: 212 CLDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE--DVGS 269
D + K + I RVF G L S + C +CG S T+EP +D+SL+++ D S
Sbjct: 299 IKDDQQKSYAQGHGDCCIAHRVFSGILRSDVTCTSCGFTSTTFEPCMDISLDMDAGDNSS 358
Query: 270 LGSA--------------------------LESFTKLEKIEDPETKFTCEKCKEQVSVEK 303
G A LE FT+ E++ D E KF CE C E+ K
Sbjct: 359 FGVANTKSHVRNGERGLAGVNSKVLTLMRCLERFTRSERL-DAEQKFFCEHCNERQESLK 417
Query: 304 QLMLDKVPSVAAFHLKRFKTDGSYVV--KIDKHVEFPLELDLKPYTSGG----------- 350
Q+ + ++P V+ FH+KRF+ V K+D ++FP LD+ PY S
Sbjct: 418 QMSIRRLPLVSCFHIKRFEHSSVKKVSRKVDHCLQFPFSLDMAPYLSSSILRSRYGNRIF 477
Query: 351 --------QNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEE 402
S+V ++ ++A++ H G GHY +Y+R + + W++ +D+ VTRVEE
Sbjct: 478 PAEASDADAVSEVSSEFEIFAVITHSGKLEA-GHYVTYLRLN-NHWYKCDDAWVTRVEEH 535
Query: 403 FVLSQDAYILFYAKQ 417
V + AY+LFY ++
Sbjct: 536 TVRTSQAYMLFYVQK 550
>gi|125591848|gb|EAZ32198.1| hypothetical protein OsJ_16406 [Oryza sativa Japonica Group]
Length = 562
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 109/370 (29%), Positives = 172/370 (46%), Gaps = 64/370 (17%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDH------------PRPCDGATEGFCVIC 156
GL NLGNTCF+N++LQ H PL H R + + C+ C
Sbjct: 183 GLNNLGNTCFMNSVLQALLHAPPLRNYFLGDRHNRYLCPRQTPMRRRSAEANDKAACLAC 242
Query: 157 ALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSK 216
L + + + SP K + + +S Y+Q+DAHEF +LD + D +
Sbjct: 243 DLDEIYSAAFSGERTPYSPAKFLYSWWQHASNLASYEQQDAHEFFISILDHIHENIKDDQ 302
Query: 217 TKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE----------- 265
K + I RVF G L S + C +CG S T+EP +D+SL+++
Sbjct: 303 HKSLAQGHGDCCIAHRVFSGILRSDVTCTHCGFTSTTFEPCMDISLDLDAGYNNSLGVAN 362
Query: 266 -----------------DVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLD 308
V +L LE FT+ E++ D E KF CE+CKE+ KQ+ +
Sbjct: 363 PKVHVRNGERSSGGTNTKVSTLMRCLERFTRAERL-DAEQKFFCERCKERQESLKQMSIR 421
Query: 309 KVPSVAAFHLKRFKTDGSYVV--KIDKHVEFPLELDLKPYTSGG---------------- 350
++P V+ FH+KRF+ + K+D ++FP LD+ PY S
Sbjct: 422 RLPLVSCFHIKRFEHSSVKKMSRKVDHCLQFPFSLDMAPYLSSSILRSRFGNRIFPSEAS 481
Query: 351 ---QNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQ 407
S+ ++ ++A++ H G GHY +Y+R + + W++ +D+ VTRVEE V +
Sbjct: 482 DADSVSEFSSEFEIFAVIMHSGKLEA-GHYVTYLRLN-NHWYKCDDAWVTRVEEHTVRTS 539
Query: 408 DAYILFYAKQ 417
AY+LFY ++
Sbjct: 540 QAYMLFYVQK 549
>gi|157818203|ref|NP_001101722.1| ubiquitin carboxyl-terminal hydrolase 51 [Rattus norvegicus]
gi|149031357|gb|EDL86355.1| rCG38961 [Rattus norvegicus]
Length = 696
Score = 165 bits (417), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 107/338 (31%), Positives = 165/338 (48%), Gaps = 30/338 (8%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q T +PL++ D + C + C++C + + +
Sbjct: 361 GLINLGNTCFMNCIVQALTR-IPLLKEFFLSDKHK-CMMTSPSLCLVCEMSSLFQAMYSG 418
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDN 228
+ P KL+ + + Y+Q+DAHEFL +LD L D + E + +
Sbjct: 419 NQSPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLHRHSRDDGIEQEGNLNHCNC 478
Query: 229 IVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE---------------DVGSLGSA 273
I+ +F G L S + C C S T +P D+SL++ V SL
Sbjct: 479 IIDYIFTGGLQSDVTCQVCHGVSTTIDPCWDISLDLPVSYTPGRAGSTGQKPRVISLTDC 538
Query: 274 LESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDK 333
L+ FT+ E + K C +C+ KQL + K+P VA FHLKRF+ G KI+
Sbjct: 539 LKWFTRPEDL-GSSAKIKCSRCQSYQQSTKQLTMKKLPIVACFHLKRFEHLGKQRRKINT 597
Query: 334 HVEFPLELDLKPYTSGGQNS-----------DVELKYHLYAIVEHMGSSPTCGHYFSYIR 382
+ FPLELD+ P+ + + S +E KY L+A++ H G+ + GHY S++R
Sbjct: 598 FISFPLELDMTPFLASTKESIMKGQPLTECVPIENKYSLFAVINHHGTLES-GHYTSFVR 656
Query: 383 SSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTE 420
D W +D+ VT+ E +L + Y+LFY +Q E
Sbjct: 657 QEKDQWFSCDDAVVTKATMEELLYSEGYLLFYHRQDIE 694
>gi|315468039|ref|NP_001186800.1| ubiquitin specific peptidase 3 [Danio rerio]
Length = 524
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 127/359 (35%), Positives = 166/359 (46%), Gaps = 53/359 (14%)
Query: 107 GAGLENLGNTCFINAILQ---------CFTHTLPLVQALRS-------FDHPRPCDGATE 150
GL NLGNTCF+NAILQ C+ LP V ALRS H R
Sbjct: 162 ATGLRNLGNTCFMNAILQSLSNIQVFSCYFKELPSV-ALRSGKTAGRRMYHTR--SQGDS 218
Query: 151 GFCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLES 210
++ R + S SP L + I F+ YQQ+DAHEFL+ LLD L
Sbjct: 219 SVSLVEEFRKTLCSLWQGSQTAFSPDALFYVIWKIMPSFRGYQQQDAHEFLRYLLDHLHR 278
Query: 211 CCLDSKTKDESLSSQGD----------------NIVQRVFGGCLISKLQCCNCGSCSDTY 254
+K S D IV VFGG L +++ C CG+ S +
Sbjct: 279 EMQGNKNGSPSPPVTSDEPNHASESKCFINGTSTIVTSVFGGVLQNEVYCLICGTESRKF 338
Query: 255 EPLIDLSLEIED--------------VGSLGSALESFTKLEKIEDPETKFTCEKCKEQVS 300
+P +DLSL+I + +L L SFT LE++++ E + C KCK++
Sbjct: 339 DPFLDLSLDIPNQFRIKTTKDQEPGPTCTLSDCLRSFTDLEELDETEL-YMCHKCKKRQK 397
Query: 301 VEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPL-ELDLKPYTSGGQNSDVE-LK 358
K+ + K+P V HLKRF K+D +VEFP+ LD+K Y +NS E
Sbjct: 398 STKKFWIQKLPKVLCLHLKRFHWTAFLRNKVDTYVEFPMCGLDMKSYLLEPENSLPERCL 457
Query: 359 YHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQ 417
Y L A+V H GS GHY +Y R W+ NDS VT V EE VL AYILFY +
Sbjct: 458 YDLAAVVVHHGSGIGSGHYTAYGRHE-GQWYHFNDSTVTLVSEEAVLKAKAYILFYTEH 515
>gi|66361578|ref|XP_627322.1| ubiquitin carboxyl-terminal hydrolase of the cysteine proteinase
fold [Cryptosporidium parvum Iowa II]
gi|46228703|gb|EAK89573.1| ubiquitin carboxyl-terminal hydrolase of the cysteine proteinase
fold [Cryptosporidium parvum Iowa II]
Length = 765
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 117/386 (30%), Positives = 192/386 (49%), Gaps = 37/386 (9%)
Query: 107 GAGLENLG-NTCFINAILQCFTHTLPL-VQALRSFDHPRPCDGATEGF-CVICALRDHIE 163
G GL N G NTC+ N+ILQ T+ L + LR +H + C + C++C DH+
Sbjct: 108 GRGLANPGWNTCYFNSILQALTYAPYLSIDCLRR-NHQKICKHMKDHLVCIMCMFEDHVN 166
Query: 164 LSLASSGK---------VLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLD 214
+ L ++ K V S K L I F+ DA EFL+ L+ L CL
Sbjct: 167 IMLDNTSKSNTKNDQPVVSSFIKCAQKL--IWKRFRIGMMHDAQEFLRYFLEALHKSCLP 224
Query: 215 SKTK-DESLS-----SQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVG 268
+ D++ + + ++F G +S++ C NC S+TY+P +D+ L+I V
Sbjct: 225 KNLQTDQTFRKIHPIAASTTYIGQLFCGFFLSRIVCHNCQYTSNTYDPFMDVPLDIMGVS 284
Query: 269 SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYV 328
+L +AL+ FTK+E ++ E ++ C KC ++ KQL+++K+P + LKRF G
Sbjct: 285 NLENALKLFTKIEYLKG-ENRYMCPKCNQRSDASKQLLIEKLPPLLTIQLKRFSYVGHGS 343
Query: 329 VKIDKHVEFPLELDLKPYTSGG---------QNSDVELKYHLYAIVEHMGSSPTCGHYFS 379
K +K + F LDL+PY S S+ Y L+A+V H G++ +CGHY++
Sbjct: 344 RKPNKAINFSDVLDLQPYMSSKTYSESKVSSSKSESSYIYKLWAVVCHSGNTLSCGHYYT 403
Query: 380 YIRSSPDTWHRLNDSRV--TRVEEEFVLSQDAYILFYAKQGTEWVSSL----LEAESIGM 433
+ +S + W+ ND V TR+E + AY+LFY + L + ES+G
Sbjct: 404 HAKSIDNKWYCFNDDYVKPTRIENVLNENHKAYLLFYYRSDFNKYDLLKDSGVSIESLGK 463
Query: 434 NADISNSSPKSVLDNVENDYTSRSGV 459
+ I+ +P+ N++ S+S +
Sbjct: 464 SQIITPLAPEISFINLQLKSNSKSSI 489
>gi|54038146|gb|AAH84261.1| Usp36 protein [Xenopus laevis]
Length = 345
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/227 (37%), Positives = 135/227 (59%), Gaps = 5/227 (2%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL+NLGNTCF+NA +QC T+T PL L S +H C + GFC++C +++H+
Sbjct: 118 VGAGLQNLGNTCFLNATVQCLTYTPPLANYLLSKEHTSNCQQS--GFCMLCIMQNHLIQV 175
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
A+SG + P + L I+ F+ QEDAHEFL+ +D ++ CL+ + + SQ
Sbjct: 176 FANSGNNVKPVSFIRELKRIARHFRFGSQEDAHEFLRYTIDAMQKACLNGYARLDR-HSQ 234
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
++V ++FGG L S++ C C + SDTY+P +D++LEI +V ++ ALE F K I
Sbjct: 235 ATSLVHQIFGGYLRSRVTCSICKNVSDTYDPYLDIALEIRNVPNIVCALEMFVK-SDILS 293
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRF-KTDGSYVVKI 331
E + C +CK++V K+ + + +V LKRF + G + K+
Sbjct: 294 GENAYMCARCKKKVPASKRFSVHRDSNVLTLSLKRFANSSGGKITKL 340
>gi|303284907|ref|XP_003061744.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457074|gb|EEH54374.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 390
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 161/326 (49%), Gaps = 19/326 (5%)
Query: 108 AGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEG--FCVICALRDHIELS 165
AGL N GNTCF + LQC HT + H GA G FCV C + H+ +
Sbjct: 63 AGLRNSGNTCFAASALQCLYHTRLFTAHFATETHDAESCGAARGGTFCVTCEYQAHVRKA 122
Query: 166 L-ASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES--- 221
L A S KL ++ ++ F R +QED+HE+++ LLD + L +++
Sbjct: 123 LDADPADAFSIGKLTSSIGKVAKHFVRGRQEDSHEYIRGLLDAMHVRWLKEHAGEDAEKT 182
Query: 222 --LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVG--SLGSALES- 276
+Q + VFGG ++ C +CG S Y+ +ID+ +E+ G S+ ++ ++
Sbjct: 183 LDQRTQETTMTYHVFGGYTCGEVVCGDCGHHSRNYQSMIDVPVEVSARGAPSIEASFKAN 242
Query: 277 FTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVE 336
F +E + D K+ C +C V K + P+V LKRF+ KI K VE
Sbjct: 243 FVDVETL-DGNNKYKCGRCDAYVRATKGSKIHVSPNVLVVPLKRFQI--GRFSKITKWVE 299
Query: 337 FPLELDLKPYTSGGQ--NSDVELKYHLYAIVEHMG--SSPTCGHYFSYIRSSPD-TWHRL 391
FP+ LDL PY S D Y LY +V H+ S GHY S+++ + D TW +
Sbjct: 300 FPVHLDLSPYMSSDAPLEGDAPPTYALYGVVVHLDFCGSAHSGHYVSFVKLNDDVTWCKC 359
Query: 392 NDSRVTRVEEEFVLSQDAYILFYAKQ 417
+D RVT +E VL Q AY+LFY ++
Sbjct: 360 DDGRVTETDEATVLKQKAYLLFYERE 385
>gi|219110875|ref|XP_002177189.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411724|gb|EEC51652.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 1003
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 141/454 (31%), Positives = 204/454 (44%), Gaps = 71/454 (15%)
Query: 28 DPSWSSPETLHDHLHPSN--HPLTLTDLD------KDQNNDDDDDYEEIYRDT---RPIS 76
D S SP+ LH H +N L +LD + Q E+ RD RP +
Sbjct: 147 DSSQKSPKILHGEHHTNNVVKELRQKNLDVQSLSGQSQGQLSGMSVEDAVRDKLGCRPRA 206
Query: 77 SSY-GRYNWGSSLLSRPVEKHWPIQIKPTGVG----AGLENLGNTCFINAILQCFTHTLP 131
+S G N L + + PT V G NLGNTCF+N+ +QC + P
Sbjct: 207 NSTDGELNLPQRGLCDERKVLESFKWIPTNVNLSYPKGFVNLGNTCFLNSTVQCLAYLPP 266
Query: 132 LVQALRSFDHPRPCDG----ATEGFCVICALRD------HIELSLASSGKVLSPRKLVDN 181
Q+L S G ++G V LR I+ SG L+PR +V
Sbjct: 267 FCQSLLSILSHESKHGEKRKTSQGRKVTFILRSLFSQVHGIDGGTTHSGSSLAPRAIVQA 326
Query: 182 LNYISS-------FFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDNI----- 229
+ + S F+ +QEDAHEFL LLD + L +++ S D +
Sbjct: 327 VPTLGSCGSRKGYKFRPGRQEDAHEFLVHLLDAMNDGELKEAGINQNASGWRDRLPIPRL 386
Query: 230 -----VQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEI--EDVGSLGSALESFTKLEK 282
+ R+FGG S+++C +C + S+TY+PL++LSLE+ + S+ AL FT+ E
Sbjct: 387 DETTFIHRIFGGYFRSQVRCTSCNNRSNTYDPLLNLSLEVSRKACNSVAQALHEFTRKET 446
Query: 283 IEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVV------------- 329
+ D + ++ C CK+ V KQL + + P LKRF G
Sbjct: 447 L-DSQNQWKCSGCKKYVCATKQLTVFRPPLSLCIQLKRFTYSGRLKFSVGFGSFGNGGGG 505
Query: 330 -KIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIR----SS 384
KI K +EFP +L L P + G Y L IV H+G S + GHY +Y+R S
Sbjct: 506 QKISKSIEFPAQLKL-PLSDG-----RSCGYSLTGIVIHVGGSASSGHYTAYVRKPGGGS 559
Query: 385 PDTWHRLNDSRVTRVEEEFVLSQ-DAYILFYAKQ 417
W ++DS V V E+ VL Q DAY+LFY ++
Sbjct: 560 KSQWFHMDDSFVEAVSEQTVLRQRDAYLLFYCRE 593
>gi|311276366|ref|XP_003135158.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 51-like [Sus
scrofa]
Length = 710
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 111/355 (31%), Positives = 168/355 (47%), Gaps = 52/355 (14%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q TH +PL++ D + C + C++C + +
Sbjct: 363 GLINLGNTCFMNCIVQALTH-IPLLKDFFLSDKHK-CIMTSPSLCLVCEMSSLFHAMYSG 420
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDN 228
+ P KL+ + + Y+Q+DAHEFL +LD L +K++S+ + N
Sbjct: 421 NRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLHR-----HSKEDSVGQEASN 475
Query: 229 ------IVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE------------------- 263
I+ +F G L S + C C + S T +P D+SL+
Sbjct: 476 PNCCNCIIDHIFTGGLQSDVTCQVCHTVSTTIDPCWDISLDLPGSCATFSCQNPERADGT 535
Query: 264 ------IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFH 317
I SL L+ FT+ E + K C C+ KQL + K+P VA FH
Sbjct: 536 VSRDERIPGNPSLTDCLQWFTRREHL-GSSAKIKCSSCQSYQESTKQLTMKKLPIVACFH 594
Query: 318 LKRFKTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSD------------VELKYHLYAIV 365
+KRF+ G KI+ + FPLELD+ P+ S + S +E KY L+A++
Sbjct: 595 IKRFEHVGKQRRKINTFISFPLELDMTPFLSSTKESKMKERQPQTDYAPIENKYSLFAVI 654
Query: 366 EHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTE 420
H G+ + GHY S+IR D W +D+ +T+ E +L + Y+LFY KQG E
Sbjct: 655 NHHGTLES-GHYTSFIRQQKDQWFSCDDAVITKATIEDLLYSEGYLLFYHKQGLE 708
>gi|432956682|ref|XP_004085735.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like, partial
[Oryzias latipes]
Length = 421
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 114/351 (32%), Positives = 168/351 (47%), Gaps = 43/351 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT PL++ D + C+ A+ C++C + + +
Sbjct: 75 GLINLGNTCFMNCIVQALTHT-PLLRDFFLSDRHK-CEMASSS-CLVCEMSQLFQEFYSG 131
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDN 228
P +L+ + + Y+Q+DAHEFL LD L C D K S + +
Sbjct: 132 HRSPHVPFRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKDDSGKRTSNPNHCNC 191
Query: 229 IVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEI---------------------EDV 267
I+ ++F G L S + C C S T +P D+SL++ E
Sbjct: 192 IIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPEGEVSALNRETP 251
Query: 268 GSLGSAL----ESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKT 323
GS +AL FT+ E + K C C KQL + K+P VA FHLKRF+
Sbjct: 252 GSGATALTDCLRRFTRPEHL-GSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEH 310
Query: 324 DGSYVVKIDKHVEFPLELDLKPYTS-------GGQNSDV------ELKYHLYAIVEHMGS 370
KI +V FPLELD+ P+ + GQN + +Y L+A+V H G+
Sbjct: 311 SAKLRRKITTYVSFPLELDMTPFMASSKEKRMNGQNQQTADAFSSDNRYSLFAVVNHQGT 370
Query: 371 SPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
+ GHY ++IR D W + +D+ +T+ E VL + Y+LFY KQ E+
Sbjct: 371 LES-GHYTTFIRQHKDQWFKCDDAVITKASLEEVLDSEGYLLFYHKQFLEY 420
>gi|328699875|ref|XP_001952323.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like
[Acyrthosiphon pisum]
Length = 765
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/335 (30%), Positives = 170/335 (50%), Gaps = 19/335 (5%)
Query: 93 VEKHWPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRS-FDHPRPCDGATEG 151
V+ W Q K VG+GL+N G C+IN+ LQ H L S H + C T G
Sbjct: 68 VQLGW--QDKKMSVGSGLDNPGVICYINSTLQALFHIPAFTNWLMSDGQHQKTCQKKT-G 124
Query: 152 F---CVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRL 208
F C++C + + +LS +G + + L+ I Y+QEDAHEFL+ L++ +
Sbjct: 125 FQKDCIVCMVCNTFKLSKKLTGSSFKASIITNRLSLICKHLSTYRQEDAHEFLRYLIESM 184
Query: 209 ESCCLDS---KTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE 265
E C L + K S+ + ++FGG + +++ C CG S T++ DL L+I
Sbjct: 185 EQCYLSAFGPAAKSLDNYSKETTPINQIFGGYMRTEVMCGKCGHISTTFQHFQDLILDIR 244
Query: 266 DVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKT-- 323
++ AL+++ K E +++ + CE C+ QV+ +K+ +++ P+V LKR+
Sbjct: 245 HSDNVNDALDNYFKKEPLDE---SYLCEICQRQVAADKKFSIERAPNVLCIQLKRYSIGM 301
Query: 324 DGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVE---LKYHLYAIVEHMGSSPTCGHYFSY 380
DG K K ++ LDL Y ++ L+YHL +++ H GSS CGHY +
Sbjct: 302 DGYSGNKNSKAIQINERLDLSSYQFDHHTFKIDVRPLRYHLVSMIIHYGSSLHCGHYTTL 361
Query: 381 IRSSPDTWHRLNDSRVTRVE-EEFVLSQDAYILFY 414
+ +++ NDS V R + + S D+YI+FY
Sbjct: 362 GLTPSGSYYCFNDSNVYRTNFKNYSTSNDSYIIFY 396
>gi|194697876|gb|ACF83022.1| unknown [Zea mays]
Length = 495
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/310 (34%), Positives = 167/310 (53%), Gaps = 19/310 (6%)
Query: 129 TLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLASSGK----VLSPRKLVDNLNY 184
T PL L H + C + G+C +C L GK LSP ++ +LN
Sbjct: 3 TRPLTTYLLEGLHSKNC--SQNGWCFMCEFE-----KLIVEGKRRKIALSPTGILSHLND 55
Query: 185 ISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESL-SSQGDNIVQRVFGGCLISKLQ 243
I S F +QEDAHEFL+ +D ++S C+ K L S++ +VQ +FGG L SK++
Sbjct: 56 IGSSFGPGKQEDAHEFLRYAIDAMQSVCMKEARKGGVLQSAEETTLVQLIFGGYLRSKIK 115
Query: 244 CCNCGSCSDTYEPLIDLSLEIE-DVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVE 302
C C S+ EP++DL++EI+ D+ SLG AL FT E + D E K+ C +CK +
Sbjct: 116 CSRCHVSSEQCEPMLDLTVEIDGDISSLGEALVRFTSTE-VLDGENKYHCSRCKSYERAK 174
Query: 303 KQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLY 362
K+L +++ P++ LKR+++ KI K + FP L+L Y + D+ Y LY
Sbjct: 175 KKLTIEEAPNILTIALKRYQS--GKFGKISKAIRFPETLNLARYMN-PDTDDISPVYSLY 231
Query: 363 AIVEH--MGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTE 420
A+V H + ++ GHY Y++ + W + +DS+V V + V+S+ AY+L YA+
Sbjct: 232 AVVVHHDVMNAAFSGHYVCYVKDTQGKWFKADDSQVKPVSLDNVMSKCAYMLLYARCSPR 291
Query: 421 WVSSLLEAES 430
SS+ +A S
Sbjct: 292 APSSVRQAMS 301
>gi|212275975|ref|NP_001131019.1| ubiquitin specific protease 51 [Mus musculus]
Length = 661
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/343 (31%), Positives = 165/343 (48%), Gaps = 35/343 (10%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q TH +PL++ + C + C++C + + +
Sbjct: 321 GLINLGNTCFMNCIVQVLTH-IPLLKEF-FLSNKHKCMMTSPSLCLVCEMSLLFQAMYSG 378
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDN 228
+ P KL+ + + Y+Q+DA EFL +LD L D E S+ +
Sbjct: 379 NQSPHIPYKLLHLIWIHAEHLAGYRQQDAQEFLIAILDVLHRHSRDDGIDQEGNSNCCNC 438
Query: 229 IVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIED--------------------VG 268
I+ +F G L S L C C S T +P D+SL++ V
Sbjct: 439 IIDHIFTGSLQSDLTCQVCHGVSTTIDPCWDISLDLPGPYTPGRASSSTSSRDGQKPRVI 498
Query: 269 SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYV 328
SL L+ FT+ E + K C +C+ KQL + K+P VA FHLKRF+ G
Sbjct: 499 SLTDCLKWFTRPEDL-GSSAKIKCSQCQSYQESTKQLTMKKLPIVACFHLKRFEHLGKQR 557
Query: 329 VKIDKHVEFPLELDLKPYTSGGQNSDV-----------ELKYHLYAIVEHMGSSPTCGHY 377
KI+ + FPLELD+ P+ + + S + E KY L+A++ H G+ + GHY
Sbjct: 558 RKINSFISFPLELDMTPFLASTKESIMKGQPLTECVPSENKYSLFAVINHHGTLES-GHY 616
Query: 378 FSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTE 420
S++R D W +D+ VT+ E +L+ + Y+LFY +Q E
Sbjct: 617 TSFVRQEKDQWFSCDDAVVTKATMEELLNSEGYLLFYHRQDIE 659
>gi|195064512|ref|XP_001996580.1| GH18640 [Drosophila grimshawi]
gi|193895400|gb|EDV94266.1| GH18640 [Drosophila grimshawi]
Length = 717
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/352 (30%), Positives = 162/352 (46%), Gaps = 43/352 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLG TCF+N I+Q HT L S H C C++C + + +
Sbjct: 369 GLLNLGATCFMNCIVQALVHTPLLSDYFMSDRHD--CGSKLTHKCLVCEVSRLFQEFYSG 426
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLS----- 223
S LS +L+ + + Y+Q+DAHEF LD L C+ +KT+ E S
Sbjct: 427 SRSPLSLHRLLHLIWNHAKHLAGYEQQDAHEFFIATLDVLHRHCVKAKTEREHESKSNSA 486
Query: 224 --------------------------SQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPL 257
Q + I+ ++F G L S + C C S T++P
Sbjct: 487 SSGTGGGGTNSSSSSSSANANASHCYGQCNCIIDQIFTGMLQSDVVCQACNGVSTTFDPF 546
Query: 258 IDLSLEIEDVGSLGSA--------LESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDK 309
D+SL++ + + G LE +T+ E + K C CK KQ L
Sbjct: 547 WDISLDLGETTTHGGVTPKTLIDCLERYTRAEHL-GSAAKIKCSTCKSYQESTKQFSLRT 605
Query: 310 VPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMG 369
+PSV +FHLKRF+ KI ++FP+E D+ P+ S +N+ + ++ LYA+V H+G
Sbjct: 606 LPSVVSFHLKRFEHSALIDRKISSFIQFPVEFDMTPFMSEKKNAYGDFRFSLYAVVNHVG 665
Query: 370 SSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
+ T GHY +++R DTW + +D +T VL + Y+LFY K E+
Sbjct: 666 TIDT-GHYTAFVRHQKDTWVKCDDHVITMASLNQVLESEGYLLFYHKNILEY 716
>gi|156373862|ref|XP_001629529.1| predicted protein [Nematostella vectensis]
gi|156216531|gb|EDO37466.1| predicted protein [Nematostella vectensis]
Length = 452
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 115/343 (33%), Positives = 168/343 (48%), Gaps = 45/343 (13%)
Query: 109 GLENLGNTCFINAILQ---------CFTHTLPLVQALRS---------FDHPRPCDGATE 150
GL NLGNTCF+NA+LQ C+ LP + LR+ F R D
Sbjct: 109 GLRNLGNTCFMNAVLQSLSNIQTFSCYFKDLPAFE-LRTDTSCEKNPYFTRSRKSDDG-- 165
Query: 151 GFCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLES 210
C++ LR + + SP L + + F+ YQQ+DAHEF+ L+DRL +
Sbjct: 166 --CLVEELRKVLCALWQGNCVSHSPEALFSTVWKVVPRFRGYQQQDAHEFMHYLMDRLHT 223
Query: 211 CCLDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEI------ 264
L S+ ++ Q D IV +FGG L S++ C C + S +P +DLSLEI
Sbjct: 224 ELLLSQ---KACFGQ-DTIVTGIFGGILQSEVTCLTCMTESRKLDPFLDLSLEIPPEFQT 279
Query: 265 -------EDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFH 317
L ++ F LEK+ + E + C KCK++ K+ + ++P+V H
Sbjct: 280 RKAKSRENPFCQLEDCMKHFVALEKLAESEL-YMCLKCKKKEQSTKKFWIQRLPNVLCLH 338
Query: 318 LKRFKTDGSYVVKIDKHVEFPLE-LDLKPYTSGGQ--NSDVELKYHLYAIVEHMGSSPTC 374
LKRF+ KID +V+FP+ LD+ PYT GQ + Y L A+V H GS +
Sbjct: 339 LKRFRFQAFLRSKIDTYVQFPIRGLDMSPYTLKGQEKGETKPVLYDLAAVVVHHGSGVSA 398
Query: 375 GHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQ 417
GHY ++ W+ NDS V+R++EE V YI FY ++
Sbjct: 399 GHYTTFAFHD-GAWYNFNDSSVSRIDEEMVAKCKGYIFFYTRR 440
>gi|148699415|gb|EDL31362.1| mCG1344 [Mus musculus]
Length = 629
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 108/343 (31%), Positives = 165/343 (48%), Gaps = 35/343 (10%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q TH +PL++ + C + C++C + + +
Sbjct: 289 GLINLGNTCFMNCIVQVLTH-IPLLKEF-FLSNKHKCMMTSPSLCLVCEMSLLFQAMYSG 346
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDN 228
+ P KL+ + + Y+Q+DA EFL +LD L D E S+ +
Sbjct: 347 NQSPHIPYKLLHLIWIHAEHLAGYRQQDAQEFLIAILDVLHRHSRDDGIDQEGNSNCCNC 406
Query: 229 IVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIED--------------------VG 268
I+ +F G L S L C C S T +P D+SL++ V
Sbjct: 407 IIDHIFTGSLQSDLTCQVCHGVSTTIDPCWDISLDLPGPYTPGRASSSTSSRDGQKPRVI 466
Query: 269 SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYV 328
SL L+ FT+ E + K C +C+ KQL + K+P VA FHLKRF+ G
Sbjct: 467 SLTDCLKWFTRPEDL-GSSAKIKCSQCQSYQESTKQLTMKKLPIVACFHLKRFEHLGKQR 525
Query: 329 VKIDKHVEFPLELDLKPYTSGGQNSDV-----------ELKYHLYAIVEHMGSSPTCGHY 377
KI+ + FPLELD+ P+ + + S + E KY L+A++ H G+ + GHY
Sbjct: 526 RKINSFISFPLELDMTPFLASTKESIMKGQPLTECVPSENKYSLFAVINHHGTLES-GHY 584
Query: 378 FSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTE 420
S++R D W +D+ VT+ E +L+ + Y+LFY +Q E
Sbjct: 585 TSFVRQEKDQWFSCDDAVVTKATMEELLNSEGYLLFYHRQDIE 627
>gi|256079377|ref|XP_002575964.1| ubiquitin-specific peptidase 42 (C19 family) [Schistosoma mansoni]
gi|353233379|emb|CCD80734.1| ubiquitin-specific peptidase 42 (C19 family) [Schistosoma mansoni]
Length = 799
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 114/366 (31%), Positives = 177/366 (48%), Gaps = 28/366 (7%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEG------------FCVIC 156
G N GNTC++N++LQC T PL+ A + H P FCV+C
Sbjct: 170 GFGNSGNTCYLNSVLQCILATGPLL-AYINHKHSNPGSCIINSGRSSIPSLNKSRFCVLC 228
Query: 157 ALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSK 216
L I + +G+ + P V N+ I + YQQEDAHEFL LL R+E L
Sbjct: 229 GLSRLINEHHSQNGRTI-PSYFVTNVRAICPSLRPYQQEDAHEFLLGLLSRMEDSSLAGL 287
Query: 217 TKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALES 276
K S+ N+++R+FGG + S++ C +C S E +LS++I SL L +
Sbjct: 288 GKVSRKLSE-TNVIRRIFGGVIRSEVTCHSCLKVSARDEQCFNLSMDITCARSLQQCLCN 346
Query: 277 FTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVE 336
+ + E++ + + CE C + + ++ + + P + L RF S K+D V+
Sbjct: 347 YVRSEELSG-QNAYKCENCHQLRAAMRKCTIYRAPPILIIQLNRF----SRHQKLDIRVD 401
Query: 337 FPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRV 396
FP +L+P+ + Q+ + + Y LYAIV H G S GHY S+ W LNDS V
Sbjct: 402 FPSSFNLRPFMT--QSKGLPILYKLYAIVNHEGYSCRSGHYVSFTLRH-GQWLSLNDSFV 458
Query: 397 TRVEEEFVLSQDAYILFYAKQGTEWVSSLLEAESIGMNADISNSSP---KSVLDNVENDY 453
+ + VL Q Y+LFY + + S ++ + SI + S S P KS+ D +E+
Sbjct: 459 STTNTDHVLRQSPYLLFY--EAVSYASPIVPSTSISTGLNNSMSLPSKNKSIQDIIESGK 516
Query: 454 TSRSGV 459
S +
Sbjct: 517 NHHSNI 522
>gi|344292651|ref|XP_003418039.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A-like
[Loxodonta africana]
Length = 914
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 165/350 (47%), Gaps = 42/350 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT P+++ D R C+ + C++C + +
Sbjct: 555 GLINLGNTCFMNCIVQALTHT-PILRDFFLSDRHR-CEMPSPELCLVCEMSSLFRELYSG 612
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
+ P KL+ + + Y+Q+DAHEFL LD L C D K S + +
Sbjct: 613 NPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDDVGKAASNPNHCN 672
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE------------------------ 263
I+ ++F G L S + C C S T +P D+SL+
Sbjct: 673 CIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGSCTSFWPVSPGRESSVNGESH 732
Query: 264 IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKT 323
I + +L L FT+ E + K C C+ KQL ++K+P VA FH KRF+
Sbjct: 733 IPGITTLTDCLRRFTRPEHLGS-NAKIKCGSCQSYQESTKQLTMNKLPVVACFHFKRFEH 791
Query: 324 DGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMGS 370
KI ++ FPLELD+ P+ + + S + E KY L+A+V H G+
Sbjct: 792 SAKQRRKITTYISFPLELDMTPFMASSKESRMNGQLQLPTSSGNNENKYSLFAVVNHQGT 851
Query: 371 SPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTE 420
+ GHY S+IR D W + +D+ +T+ + VL + Y+LFY KQ E
Sbjct: 852 LES-GHYTSFIRHHKDQWFKCDDAVITKASIKDVLDSEGYLLFYHKQVLE 900
>gi|242077396|ref|XP_002448634.1| hypothetical protein SORBIDRAFT_06g030580 [Sorghum bicolor]
gi|241939817|gb|EES12962.1| hypothetical protein SORBIDRAFT_06g030580 [Sorghum bicolor]
Length = 565
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 113/374 (30%), Positives = 174/374 (46%), Gaps = 69/374 (18%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDH------------PRPCDG-ATEGFCVI 155
GL NLGNTCF+N++LQ H PL H R D A C+
Sbjct: 183 GLNNLGNTCFMNSVLQALLHAPPLRNYFLGDRHNRFLCPRRTPVRHRATDADAARVACLA 242
Query: 156 CALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDS 215
C L + + + SP K + + +S Y+Q+DAHEF +LD + D
Sbjct: 243 CDLDEIYSAAFSGERMPYSPAKFLYSWWQHASNLASYEQQDAHEFFISILDHIHENIKDD 302
Query: 216 KTKDESLSSQGDN---IVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE------- 265
+ K + +QG I RVF G L S + C +CG S T+EP +D+SL+++
Sbjct: 303 QQKSHA-QAQGHGDCCIAHRVFSGILRSDVTCTSCGFTSTTFEPCMDISLDMDAGDNSSF 361
Query: 266 ---------------------DVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQ 304
V +L LE FT+ E++ D E KF CE C E+ KQ
Sbjct: 362 GVANTKPHVRNGERGLAGMNSKVSTLMRCLERFTRSERL-DAEQKFFCEHCNERQESLKQ 420
Query: 305 LMLDKVPSVAAFHLKRFKTDGSYVV--KIDKHVEFPLELDLKPYTSGG------------ 350
+ + ++P V+ FH+KRF+ V K+D ++FP LD+ PY S
Sbjct: 421 MSIRRLPLVSCFHIKRFEHSSVKKVSRKVDHCLQFPFSLDMAPYLSSSILRSRYGNRIFP 480
Query: 351 -------QNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
S++ ++ ++A++ H G GHY +Y+R + + W++ +D+ VTRVEE
Sbjct: 481 AEASDADAVSEMSSEFEIFAVITHSGKLEA-GHYVTYLRLN-NHWYKCDDAWVTRVEEHT 538
Query: 404 VLSQDAYILFYAKQ 417
V + AY+LFY ++
Sbjct: 539 VRTSQAYMLFYVQK 552
>gi|223005912|ref|NP_001138547.1| ubiquitin carboxyl-terminal hydrolase 27 [Bos taurus]
gi|296470746|tpg|DAA12861.1| TPA: ubiquitin carboxyl-terminal hydrolase 27 [Bos taurus]
Length = 438
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 165/350 (47%), Gaps = 42/350 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT P+++ D R C+ + C++C + +
Sbjct: 79 GLINLGNTCFMNCIVQALTHT-PILRDFFLSDRHR-CEMPSPELCLVCEMSSLFRELYSG 136
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
+ P KL+ + + Y+Q+DAHEFL LD L C D K S + +
Sbjct: 137 NPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDDAGKAASNPNHCN 196
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE------------------------ 263
I+ ++F G L S + C C S T +P D+SL+
Sbjct: 197 CIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGSCTSFWPMSPGRESSVNGESH 256
Query: 264 IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKT 323
I + +L L FT+ E + K C C+ KQL ++K+P VA FH KRF+
Sbjct: 257 IPGITTLTDCLRRFTRPEHL-GSSAKIKCGSCQSYQESTKQLTMNKLPVVACFHFKRFEH 315
Query: 324 DGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMGS 370
KI ++ FPLELD+ P+ + + S + E KY L+A+V H G+
Sbjct: 316 SAKQRRKITTYISFPLELDMTPFMASSKESRMNGQLQLPTNSGNDENKYSLFAVVNHQGT 375
Query: 371 SPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTE 420
+ GHY S+IR D W + +D+ +T+ + VL + Y+LFY KQ E
Sbjct: 376 LES-GHYTSFIRHHKDQWFKCDDAVITKASIKDVLDSEGYLLFYHKQVLE 424
>gi|322800426|gb|EFZ21430.1| hypothetical protein SINV_08883 [Solenopsis invicta]
Length = 604
Score = 163 bits (412), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 132/402 (32%), Positives = 196/402 (48%), Gaps = 57/402 (14%)
Query: 66 EEIYRDTRPISSSYGRYNW-GSSLLSRPVEKHWPIQIKPTGVGAGLENLGNTCFINAILQ 124
E + R+ RP ++ ++ SS +RP ++ K V GL NLGNTCF+N +LQ
Sbjct: 202 EVVVRNLRPRTARKRLHSLDASSADNRPAKRRSSKSTKEKKV-VGLRNLGNTCFMNVVLQ 260
Query: 125 CFTHT---------LPLVQALRSFDH---PRPCDG--ATEGFCVICALRDHI-------- 162
F + +P ++ + +FD P G T G ++ D +
Sbjct: 261 SFNNISHFCEYLTQMPCLEGI-AFDESTGPPTHRGRIVTPGRAKEMSMSDALLAEELRKV 319
Query: 163 --ELSLA-SSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLD--SKT 217
LSL S+G+ +SP L + + F+ YQQ+DAHEFL +LDRL + L +
Sbjct: 320 LLGLSLGGSNGQAISPECLFLAIWKVVPRFRGYQQQDAHEFLTYMLDRLHTELLQLLPRL 379
Query: 218 KDESLSSQG-DNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEI------------ 264
E L +G +IV VFGG L+S + C NC + S T+EP DLSL+I
Sbjct: 380 GHEPLGLRGKQSIVTAVFGGTLLSVVHCMNCRTDSKTHEPFQDLSLDIPDRLQRSRTKEQ 439
Query: 265 EDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTD 324
E+V SL +L F K+E++ D E F C+ C + K+ + ++P+V H+KRF+
Sbjct: 440 EEVCSLTYSLTRFFKVEELADSELYF-CDNCMGKQRSTKRFWIHRLPNVLCLHIKRFRWC 498
Query: 325 GSYVVKIDKHVEFPLE-LDLKPYTS--------GGQNSDVELKYHLYAIVEHMGSSPTCG 375
SY K+D V+FP+E LD+ +T G QNS + Y L A++ H GS G
Sbjct: 499 NSYRSKVDTQVDFPMESLDMSAFTVRGVTGTRLGAQNSHL---YDLAAVIVHHGSGAGTG 555
Query: 376 HYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQ 417
HY ++ W NDS V + V YILFY ++
Sbjct: 556 HYTAFA-VHDGQWFHFNDSSVRPATTDAVAKCKPYILFYVRR 596
>gi|339254984|ref|XP_003371133.1| ubiquitin carboxyl- hydrolase 36 [Trichinella spiralis]
gi|316960713|gb|EFV48060.1| ubiquitin carboxyl- hydrolase 36 [Trichinella spiralis]
Length = 247
Score = 163 bits (412), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 85/252 (33%), Positives = 140/252 (55%), Gaps = 11/252 (4%)
Query: 148 ATEGFCVICALRDHIELSLA---SSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCL 204
T GFC ICALR H++ A S+ SP + ++ + +QEDAHEFL+
Sbjct: 3 GTNGFCAICALRSHVKRVFAAAKSNSGSFSPTHIAQHIRCVMKSHSHGRQEDAHEFLRYF 62
Query: 205 LDRLESCCL-DSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE 263
+D +++ L + ++ + +Q +I+ R+FGG S++ C NC S Y+P +DLSLE
Sbjct: 63 VDAMQNAALFPYRGRNLDIFTQETSIISRIFGGFHRSQIVCNNCQYVSVIYDPFLDLSLE 122
Query: 264 IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKT 323
I+ ++ A+ +TK+E + + + + C +CK +VS K L + P+V HLKRF
Sbjct: 123 IKQWNTVEHAMAHYTKMETLSNDDA-YNCPRCKRRVSARKILTIHSAPNVLTIHLKRFDH 181
Query: 324 DGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRS 383
G KID+H+ + ++L+P+ + Q V Y LY +V H G S GHY++++ +
Sbjct: 182 FG----KIDRHIGYSDRMNLRPFMTEKQGPPVN--YRLYGVVIHNGRSTNSGHYYAFVCN 235
Query: 384 SPDTWHRLNDSR 395
WH ++DSR
Sbjct: 236 PLGQWHLMDDSR 247
>gi|303288592|ref|XP_003063584.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454652|gb|EEH51957.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 294
Score = 163 bits (412), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 109/325 (33%), Positives = 157/325 (48%), Gaps = 54/325 (16%)
Query: 113 LGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLASSGKV 172
LGN+CF+NAILQ THT PL++ R H R CALR +
Sbjct: 1 LGNSCFLNAILQALTHTTPLLELCRVGAHGRS-----------CALRR----------VL 39
Query: 173 LSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDNIVQR 232
L+P + NL+ ++ F R +QEDAHE L+ L+ ++ CL + + +V+R
Sbjct: 40 LTPVPVFGNLHLLARHFTRGRQEDAHELLRLCLESMDESCLLNAGRAPP------TVVER 93
Query: 233 VFGGCLISKLQCCNCGSCSDTYEPLIDLSLEI-EDVGSLGSALESFTKLEKIEDPETKFT 291
+F G ++++C CG+ S+ Y+P +D+SLE+ V + ALE FTK E +E E +
Sbjct: 94 IFQGAFRNQVKCGACGAKSNAYDPFLDVSLELPRRVHRVRDALELFTKEETLEG-ENAYK 152
Query: 292 CEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPYTSGGQ 351
CE C K+L + + P+V HLKRF G KI + V F ++L + S
Sbjct: 153 CEACDALRPATKRLTIHEAPAVLVIHLKRFDLFGG---KISRPVAFDDVVELSGHMSDTA 209
Query: 352 NSDVELKYHLYAIVEHMGSSPTCGHY----------------------FSYIRSSPDTWH 389
+Y LYA+V H GSS CGHY F RSS D W+
Sbjct: 210 VESRGPRYRLYAMVVHAGSSVGCGHYYAYARASGGGGGGGGAAAEEDSFYGTRSSGDDWY 269
Query: 390 RLNDSRVTRVEEEFVLSQDAYILFY 414
+D+ V V V +AY+LFY
Sbjct: 270 LFDDAVVRPVSAREVFDDEAYVLFY 294
>gi|395854546|ref|XP_003799748.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A-like
[Otolemur garnettii]
Length = 888
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 108/347 (31%), Positives = 164/347 (47%), Gaps = 42/347 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT P+++ D R C+ + C++C + +
Sbjct: 529 GLINLGNTCFMNCIVQALTHT-PILRDFFLSDRHR-CEMPSPELCLVCEMSSLFRELYSG 586
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
+ P KL+ + + Y+Q+DAHEFL LD L C D K + + +
Sbjct: 587 NPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDDVGKAANNPNHCN 646
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE------------------------ 263
I+ ++F G L S + C C S T +P D+SL+
Sbjct: 647 CIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGSCTSFWPMSPGRESSVNGESH 706
Query: 264 IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKT 323
I + +L L FT+ E + K C C+ KQL ++K+P VA FH KRF+
Sbjct: 707 ISGITTLTDCLRRFTRPEHLGS-SAKIKCGSCQSYQESTKQLTMNKLPVVACFHFKRFEH 765
Query: 324 DGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMGS 370
KI ++ FPLELD+ P+ + + S + E KY L+A+V H G+
Sbjct: 766 SAKQRRKITTYISFPLELDMTPFMASSKESRMNGQLQLPTNSGNNENKYSLFAVVNHQGT 825
Query: 371 SPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQ 417
+ GHY S+IR D W + +D+ +T+ + VL + Y+LFY KQ
Sbjct: 826 LES-GHYTSFIRHHKDQWFKCDDAVITKASIKDVLDSEGYLLFYHKQ 871
>gi|326429193|gb|EGD74763.1| hypothetical protein PTSG_07000 [Salpingoeca sp. ATCC 50818]
Length = 614
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 114/342 (33%), Positives = 171/342 (50%), Gaps = 19/342 (5%)
Query: 86 SSLLSRPVEKHWPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPC 145
S +L+ P + ++P GL N+GNTC+INA+LQC T +AL S
Sbjct: 64 SGVLNDPSVIAGSVDVRPLPTTLGLANVGNTCYINAVLQCINATTIFQRALASLP----- 118
Query: 146 DGATEGFCVICALRDHIELS------LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHE 199
+ EG V L ELS ++ ++P +V +L +SS F +QED+HE
Sbjct: 119 NKDEEGTLVHKMLALMGELSGSDAEADQAAPAAVNPVHVVQHLLTLSSDFVFGRQEDSHE 178
Query: 200 FLQCLLDRLESCCLDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLID 259
Q LL L + + Q V ++FGG + S+L C C S +YE +D
Sbjct: 179 LYQTLLRGLAK-DMTPAGHHLPVCDQETTFVHQLFGGTIASQLMCPKCQYTSTSYESCLD 237
Query: 260 LSLEI--EDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFH 317
L LEI E +L LE+FT EK+ + K+ CE C V KQL + K P++
Sbjct: 238 LQLEIKEEITDTLEEMLEAFTCPEKLA-ADNKWKCESCNSHVRALKQLSVYKAPNILCIQ 296
Query: 318 LKRFKTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEH--MGSSPTCG 375
LKRF+ K++KH+ FP +L+LK + + G L+Y LYAI+ H M + + G
Sbjct: 297 LKRFRL--GVFGKVNKHIAFPHQLNLKNFMTPGTRDTDGLEYDLYAILIHLDMYNLTSFG 354
Query: 376 HYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQ 417
HY + I+ S W +DS+V VE + + + Y+LFY ++
Sbjct: 355 HYVALIKGSDGVWRLYDDSKVQEVERNVIPNVNPYMLFYKRR 396
>gi|335306036|ref|XP_003135145.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A-like [Sus
scrofa]
Length = 904
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 165/350 (47%), Gaps = 42/350 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT P+++ D R C+ + C++C + +
Sbjct: 545 GLINLGNTCFMNCIVQALTHT-PILRDFFLSDRHR-CEMPSPELCLVCEMSSLFRELYSG 602
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
+ P KL+ + + Y+Q+DAHEFL LD L C D K + + +
Sbjct: 603 NPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDDAGKAANNPNHCN 662
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE------------------------ 263
I+ ++F G L S + C C S T +P D+SL+
Sbjct: 663 CIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGSCTSFWPMSPGRESSVNGESH 722
Query: 264 IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKT 323
I + +L L FT+ E + K C C+ KQL ++K+P VA FH KRF+
Sbjct: 723 IPGITTLTDCLRRFTRPEHLGS-SAKIKCGSCQSYQESTKQLTMNKLPVVACFHFKRFEH 781
Query: 324 DGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMGS 370
KI ++ FPLELD+ P+ + + S + E KY L+A+V H G+
Sbjct: 782 SAKQRRKITTYISFPLELDMTPFMASSKESRMNGQLQLPTNSGNDENKYSLFAVVNHQGT 841
Query: 371 SPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTE 420
+ GHY S+IR D W + +D+ +T+ + VL + Y+LFY KQ E
Sbjct: 842 LES-GHYTSFIRHHKDQWFKCDDAVITKASIKDVLDSEGYLLFYHKQVLE 890
>gi|297303872|ref|XP_002806289.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 27-like [Macaca
mulatta]
Length = 487
Score = 162 bits (411), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 165/350 (47%), Gaps = 42/350 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT P+++ D R C+ + C++C + +
Sbjct: 128 GLINLGNTCFMNCIVQALTHT-PILRDFFLSDRHR-CEMPSPELCLVCEMSSLFRELYSG 185
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
+ P KL+ + + Y+Q+DAHEFL LD L C D K + + +
Sbjct: 186 NPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDDVGKAANNPNHCN 245
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE------------------------ 263
I+ ++F G L S + C C S T +P D+SL+
Sbjct: 246 CIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGSCTSFWPMSPGRESSVNGESH 305
Query: 264 IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKT 323
I + +L L FT+ E + K C C+ KQL ++K+P VA FH KRF+
Sbjct: 306 IPGITTLTDCLRRFTRPEHLGS-SAKIKCGSCQSYQESTKQLTMNKLPVVACFHFKRFEH 364
Query: 324 DGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMGS 370
KI ++ FPLELD+ P+ + + S + E KY L+A+V H G+
Sbjct: 365 SAKQRRKITTYISFPLELDMTPFMASSKESRMNGQLQLPTNSGNNENKYSLFAVVNHQGT 424
Query: 371 SPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTE 420
+ GHY S+IR D W + +D+ +T+ + VL + Y+LFY KQ E
Sbjct: 425 LES-GHYTSFIRHHKDQWFKCDDAVITKASIKDVLDSEGYLLFYHKQVLE 473
>gi|395856749|ref|XP_003800781.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 22 [Otolemur garnettii]
Length = 725
Score = 162 bits (411), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 113/352 (32%), Positives = 166/352 (47%), Gaps = 43/352 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT PL++ D R C+ + C++C + + +
Sbjct: 377 GLINLGNTCFMNCIVQALTHT-PLLRDFFLSDRHR-CEMQSPSSCLVCEMSSLFQEFYSG 434
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
P KL+ + + Y+Q+DAHEFL LD L C D K + + +
Sbjct: 435 HRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHCN 494
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDV---------GSLGSA----- 273
I+ ++F G L S + C C S T +P D+SL++ GS GS
Sbjct: 495 CIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGSVVNGES 554
Query: 274 -----------LESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK 322
L FT+ E + K C C KQL + K+P VA FHLKRF+
Sbjct: 555 HVSGTTTLTDCLRRFTRPEHLGS-SAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFE 613
Query: 323 TDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMG 369
KI +V FPLELD+ P+ + + S + + KY L+A+V H G
Sbjct: 614 HSAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPVDSLSSDNKYSLFAVVNHQG 673
Query: 370 SSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
+ + GHY S+IR D W + +D+ +T+ + VL + Y+LFY KQ E+
Sbjct: 674 TLES-GHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHKQFLEY 724
>gi|194227923|ref|XP_001494487.2| PREDICTED: hypothetical protein LOC100063066 [Equus caballus]
Length = 1112
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 108/350 (30%), Positives = 165/350 (47%), Gaps = 42/350 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT P+++ D R C+ + C++C + +
Sbjct: 753 GLINLGNTCFMNCIVQALTHT-PILRDFFLSDRHR-CEMPSPELCLVCEMSSLFRELYSG 810
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
+ P KL+ + + Y+Q+DAHEFL LD L C D K + + +
Sbjct: 811 NPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDDAGKAANNPNHCN 870
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE------------------------ 263
I+ ++F G + S + C C S T +P D+SL+
Sbjct: 871 CIIDQIFTGGMQSDVTCQACHGVSTTIDPCWDISLDLPGSCTSFWPMSPGRESSVNGESH 930
Query: 264 IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKT 323
I + +L L FT+ E + K C C+ KQL ++K+P VA FH KRF+
Sbjct: 931 IPGITTLTDCLRRFTRPEHLGS-SAKIKCGSCQSYQESTKQLTMNKLPVVACFHFKRFEH 989
Query: 324 DGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMGS 370
KI ++ FPLELD+ P+ + + S + E KY L+A+V H G+
Sbjct: 990 SAKQRRKITTYISFPLELDMTPFMASSKESRMNGQLQLPTNSGNDENKYSLFAVVNHQGT 1049
Query: 371 SPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTE 420
+ GHY S+IR D W + +D+ +T+ + VL + Y+LFY KQ E
Sbjct: 1050 LES-GHYTSFIRHHKDQWFKCDDAVITKASIKDVLDSEGYLLFYHKQVLE 1098
>gi|410908263|ref|XP_003967610.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Takifugu
rubripes]
Length = 612
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 134/414 (32%), Positives = 191/414 (46%), Gaps = 58/414 (14%)
Query: 105 GVGA-GLENLGNTCFINAILQ---------CFTHTLPLVQ------ALRSFDHPRPCDGA 148
VGA GL NLGNTCF+NAILQ C+ LP V A R H R
Sbjct: 156 AVGATGLRNLGNTCFMNAILQSLSNIEQFSCYFKELPAVSLRSGKTAGRRMYHTR--SQG 213
Query: 149 TEGFCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRL 208
++ R + S SP L + I F+ YQQ+DAHEF++ LLD L
Sbjct: 214 DSSVSLVEEFRKTLCSLWQGSQTAFSPDSLFYTIWKIMPSFRGYQQQDAHEFMRYLLDHL 273
Query: 209 ESCCLDSKTKDESLSSQGD-----------------NIVQRVFGGCLISKLQCCNCGSCS 251
+ +S D ++V +FGG L +++ C CG+ S
Sbjct: 274 HRELQYGRNGASHAASPQDGVRLSAADGKCCINGTASVVTSIFGGILQNEVNCLICGTES 333
Query: 252 DTYEPLIDLSLEI-----------EDVG---SLGSALESFTKLEKIEDPETKFTCEKCKE 297
++P +DLSL+I ++ G +L L SFT LE++++ E F C KCK+
Sbjct: 334 RKFDPFLDLSLDIPSQFRQKRSKDQEPGPTCTLSDCLRSFTDLEELDETELYF-CHKCKK 392
Query: 298 QVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE-LDLKPYTSGGQNSDVE 356
+ K+ + K+P V HLKRF KID +VEFPL+ LD++ Y +NS E
Sbjct: 393 RQKSTKKFWVQKLPKVLCLHLKRFHWTAFLRNKIDTYVEFPLKGLDMRGYLLEPENSLPE 452
Query: 357 -LKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYA 415
Y L A+V H GS GHY +Y S W+ NDS VT E+ V AYILFY
Sbjct: 453 SCVYDLVAVVVHHGSGVGSGHYTAY-GSHEGCWYHFNDSTVTLTNEDAVRKAKAYILFYV 511
Query: 416 KQGTEWVSSLLEA----ESIGMNADISNSSPKSV-LDNVENDYTSRSGVANAES 464
++ + S A + + + P + L N+E+ ++ S VA A++
Sbjct: 512 ERAEQAASDDPAATRPPAEVTQDTTAGDKDPTGLALMNMESPHSDASDVAVADT 565
>gi|290998513|ref|XP_002681825.1| ubiquitin specific protease [Naegleria gruberi]
gi|284095450|gb|EFC49081.1| ubiquitin specific protease [Naegleria gruberi]
Length = 868
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 175/326 (53%), Gaps = 33/326 (10%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICAL----RDH 161
+G GL+NLGNTCF+NA LQC +T ALR+F R ++ F + A+ R+
Sbjct: 197 IGPGLQNLGNTCFMNAALQCLMYT----PALRNFLLSRKIGEQSKKFNALDAMSLLAREM 252
Query: 162 IELSLASSGK-----VLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSK 216
+ SSG+ V+SP + +L I F YQ EDAHEF+ LLD++E+ +
Sbjct: 253 FLGNETSSGRSSRSNVVSPGFIAKHLKGIGGFVLGYQ-EDAHEFIVQLLDKMENAIV--- 308
Query: 217 TKDESLSSQGDNIV------QRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSL 270
E + DNIV +VFGG L S+++ S+ Y+ ID+ L++ + S+
Sbjct: 309 ---EKYKGKMDNIVLETNPVHQVFGGYLRSQIKTMETNYISNKYDAFIDIELQLNNCTSV 365
Query: 271 GSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVK 330
+ +++ +++ D + K+ C K V+ K+L + + P LKRF G K
Sbjct: 366 EKSFQNYITPDRL-DGKNKYKCPKTNTYVTASKKLTIHEAPINLILQLKRFNIFGK---K 421
Query: 331 IDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHR 390
+ K + + LD+ PY S N + +Y LY ++ H G S + GHY+S++++S W+R
Sbjct: 422 VSKKISYEDTLDISPYMS---NKNTVARYSLYGVLVHSGGSSSSGHYYSFVKNSNGIWYR 478
Query: 391 LNDSRVTRVEEEFVLSQDAYILFYAK 416
++DS VT+V + L Q AY+LFY++
Sbjct: 479 MDDSSVTQVSQNTALGQQAYMLFYSR 504
>gi|301787135|ref|XP_002928982.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like
[Ailuropoda melanoleuca]
Length = 523
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 115/352 (32%), Positives = 166/352 (47%), Gaps = 43/352 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT PL++ D R C+ + C++C + + +
Sbjct: 175 GLINLGNTCFMNCIVQALTHT-PLLRDFFLSDRHR-CEMQSPSSCLVCEMSSLFQEFYSG 232
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
P KL+ + + Y+Q+DAHEFL LD L C D K + + +
Sbjct: 233 HRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHCN 292
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDV---------GSLGSA----- 273
I+ ++F G L S + C C S T +P D+SL++ GS GS
Sbjct: 293 CIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGSVVNGES 352
Query: 274 -----------LESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK 322
L FT+ E + K C C KQL + KVP VA FHLKRF+
Sbjct: 353 HVAGTTTLTDCLRRFTRPEHL-GSGAKIKCSGCHSYQESTKQLTMKKVPIVACFHLKRFE 411
Query: 323 TDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMG 369
KI +V FPLELD+ P+ + + S + + KY L+A+V H G
Sbjct: 412 HSAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQLTDSLNNDNKYSLFAVVNHQG 471
Query: 370 SSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
+ + GHY S+IR D W + +D+ +T+ E VL + Y+LFY KQ E+
Sbjct: 472 TLES-GHYTSFIRQHKDQWFKCDDAIITKASIEDVLDSEGYLLFYHKQFLEY 522
>gi|297303100|ref|XP_002806114.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like, partial
[Macaca mulatta]
Length = 347
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 155/288 (53%), Gaps = 16/288 (5%)
Query: 131 PLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQ 190
PL + S +H + C C++C + HI +L G V+ P + + + F
Sbjct: 2 PLANYMLSREHSQLCH--HHKCCMLCTMEAHITRALHRPGHVIQPSQA------LVAGFH 53
Query: 191 RYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSC 250
R +QEDAHEFL ++D ++ CL K S+ ++ ++FGGC S+++C +C
Sbjct: 54 RGKQEDAHEFLMFIVDAMKRACLPGH-KQVDHDSEDTTLIHQIFGGCWRSQIKCLHCQGV 112
Query: 251 SDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKV 310
SDT++P +D++L+I+ S+ ALE K E++ + E + C C ++ K L
Sbjct: 113 SDTFDPYLDIALDIQAAQSVKQALEQVVKPEEL-NGENAYHCGLCLQKAPASKTFTLHTS 171
Query: 311 PSVAAFHLKRFK-TDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMG 369
V LKRF G+ K+ K+V++P LD++PY S Q + L Y LYA++ H G
Sbjct: 172 AKVLILVLKRFSDVTGN---KLAKNVQYPECLDMQPYMS--QQNTGPLVYVLYAVLVHAG 226
Query: 370 SSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQ 417
S GHY SY+++ W++++D+ VT VLSQ AY+LFY ++
Sbjct: 227 WSCHNGHYLSYVKAPGGQWYKMDDAEVTACSIASVLSQQAYVLFYIQK 274
>gi|345806939|ref|XP_003435526.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A-like [Canis
lupus familiaris]
Length = 809
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 165/350 (47%), Gaps = 42/350 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT P+++ D R C+ + C++C + +
Sbjct: 450 GLINLGNTCFMNCIVQALTHT-PILRDFFLSDRHR-CEMPSPELCLVCEMSSLFRELYSG 507
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
+ P KL+ + + Y+Q+DAHEFL LD L C D K + + +
Sbjct: 508 NPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDDAGKAANNPNHCN 567
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE------------------------ 263
I+ ++F G L S + C C S T +P D+SL+
Sbjct: 568 CIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGSCTSFWPMSPGRESSVNGESH 627
Query: 264 IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKT 323
I + +L L FT+ E + K C C+ KQL ++K+P VA FH KRF+
Sbjct: 628 IPGITTLTDCLRRFTRPEHL-GSSAKIKCGSCQSYQESTKQLTMNKLPVVACFHFKRFEH 686
Query: 324 DGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMGS 370
KI ++ FPLELD+ P+ + + S + E KY L+A+V H G+
Sbjct: 687 SAKQRRKITTYISFPLELDMTPFMASSKESRMNGQLQLPTNSGNDENKYSLFAVVNHQGT 746
Query: 371 SPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTE 420
+ GHY S+IR D W + +D+ +T+ + VL + Y+LFY KQ E
Sbjct: 747 LES-GHYTSFIRHHKDQWFKCDDAVITKASIKDVLDSEGYLLFYHKQVLE 795
>gi|354491289|ref|XP_003507788.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 51-like
[Cricetulus griseus]
Length = 709
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 107/339 (31%), Positives = 165/339 (48%), Gaps = 34/339 (10%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q T +PL++ D + C + C++C + + +
Sbjct: 370 GLINLGNTCFMNCIVQALTR-IPLLKDFFLSDKHK-CTMTSPSLCLVCEMSSLFQAMYSG 427
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDN 228
+ P KL+ + + Y+Q+DAHEFL +LD L D + E + +
Sbjct: 428 NQSPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLHRHSRDDSIEQEGNPNSCNC 487
Query: 229 IVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEI-----------------EDVG--S 269
I+ ++F G L S L C C S T +P D+SL++ G S
Sbjct: 488 IIDQIFTGGLQSDLTCQVCHGVSTTIDPCWDISLDLPGSYTSERASGTVSRDGSKAGGPS 547
Query: 270 LGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVV 329
L L+ FT+ E + K C +C+ KQL + K+P VA FHLKRF+ G
Sbjct: 548 LTDCLQWFTRPEDL-GSSAKIKCSRCQSYQESTKQLTMKKLPIVACFHLKRFEHLGKQRR 606
Query: 330 KIDKHVEFPLELDLKPYTSGGQNSDV-----------ELKYHLYAIVEHMGSSPTCGHYF 378
KI+ + FPLELD+ P+ + + S + E KY L+A++ H G+ + GHY
Sbjct: 607 KINTFISFPLELDMTPFLASTKESIMKGQPLADCVPSENKYSLFAVINHHGTLES-GHYT 665
Query: 379 SYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQ 417
S++R D W +D+ VT+ E +L + Y+LFY +Q
Sbjct: 666 SFVRQQKDQWFSCDDAIVTKATMEELLYSEGYLLFYHRQ 704
>gi|410988611|ref|XP_004000577.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A-like [Felis
catus]
Length = 752
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 165/350 (47%), Gaps = 42/350 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT P+++ D R C+ + C++C + +
Sbjct: 393 GLINLGNTCFMNCIVQALTHT-PILRDFFLSDRHR-CEMPSPELCLVCEMSSLFRELYSG 450
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
+ P KL+ + + Y+Q+DAHEFL LD L C D K + + +
Sbjct: 451 NPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDDAGKAANNPNHCN 510
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE------------------------ 263
I+ ++F G L S + C C S T +P D+SL+
Sbjct: 511 CIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGSCTSFWPMSPGRESSVNGESH 570
Query: 264 IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKT 323
I + +L L FT+ E + K C C+ KQL ++K+P VA FH KRF+
Sbjct: 571 IPGITTLTDCLRRFTRPEHLGS-SAKIKCGSCQSYQESTKQLTMNKLPVVACFHFKRFEH 629
Query: 324 DGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMGS 370
KI ++ FPLELD+ P+ + + S + E KY L+A+V H G+
Sbjct: 630 SAKQRRKITTYISFPLELDMTPFMASSKESRMNGQLQLPTNSGNDENKYSLFAVVNHQGT 689
Query: 371 SPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTE 420
+ GHY S+IR D W + +D+ +T+ + VL + Y+LFY KQ E
Sbjct: 690 LES-GHYTSFIRHHKDQWFKCDDAVITKASIKDVLDSEGYLLFYHKQVLE 738
>gi|390481017|ref|XP_003736056.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 22-like [Callithrix jacchus]
Length = 697
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 112/352 (31%), Positives = 166/352 (47%), Gaps = 43/352 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT PL++ D R C+ + C++C + + +
Sbjct: 349 GLINLGNTCFMNCIVQALTHT-PLLRDFFLSDRHR-CEMQSPSSCLVCEMSSLFQEFYSG 406
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
P KL+ + + Y+Q+DAHEFL LD L C D K + + +
Sbjct: 407 HRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHCN 466
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDV---------GSLGSA----- 273
I+ ++F G L S + C C S T +P D+SL++ GS G+
Sbjct: 467 CIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGNVVNGES 526
Query: 274 -----------LESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK 322
L FT+ E + K C C KQL + K+P VA FHLKRF+
Sbjct: 527 HMAGTTTLTDCLRRFTRPEHLGS-SAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFE 585
Query: 323 TDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMG 369
KI +V FPLELD+ P+ + + S + + KY L+A+V H G
Sbjct: 586 HSAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG 645
Query: 370 SSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
+ + GHY S+IR D W + +D+ +T+ + VL + Y+LFY KQ E+
Sbjct: 646 TLES-GHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHKQFLEY 696
>gi|254566709|ref|XP_002490465.1| Ubiquitin-specific protease [Komagataella pastoris GS115]
gi|238030261|emb|CAY68184.1| Ubiquitin-specific protease [Komagataella pastoris GS115]
gi|328350857|emb|CCA37257.1| ubiquitin carboxyl-terminal hydrolase 22/27/51 [Komagataella
pastoris CBS 7435]
Length = 502
Score = 162 bits (409), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 106/336 (31%), Positives = 167/336 (49%), Gaps = 32/336 (9%)
Query: 98 PIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICA 157
P +K + G N+G TCF+++I+Q H P V+ + C + C+ C
Sbjct: 175 PPSLKASTGLRGFINMGATCFMSSIVQTIVHN-PFVRDYFLSGYHAKCTKKMDT-CITCC 232
Query: 158 LRDHIELSLAS-SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSK 216
+ + ++ + K P L+ + + Y ++DAHEF Q LLD +
Sbjct: 233 IDEIFKVFYGTDETKGYGPTALLTAAWRVKNSLAGYSEQDAHEFWQFLLDEIHK------ 286
Query: 217 TKDESLSSQGDN------IVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVG-- 268
D L + D+ I + F G L S + C C +T +P++DLSLEI +
Sbjct: 287 -SDTELHPELDDTSTCRCITHKTFAGQLQSTVTCEKCLHSKNTVDPMLDLSLEIAKISKD 345
Query: 269 --SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGS 326
+L L+ FT EK++ C CK++ + KQL++ K+P + AF LKRF+ S
Sbjct: 346 KVTLNDCLDLFTSKEKLDSMTI---CSHCKKETTRTKQLLVRKLPPILAFQLKRFEHSAS 402
Query: 327 YVVKIDKHVEFPLELDLKPYTSG--------GQNSDVELKYHLYAIVEHMGSSPTCGHYF 378
KI+ HV FPL LD++PYT G+ S + Y L+AIV H+GS T GHY
Sbjct: 403 SSTKIETHVGFPLFLDMEPYTVSETLNSNEQGRASWGLMTYQLFAIVIHIGSVNT-GHYI 461
Query: 379 SYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFY 414
I++ W + +DSR+T V +++V +AY+L+Y
Sbjct: 462 CIIKNRDGNWFKFDDSRITLVSQDYVSKSNAYLLYY 497
>gi|441675766|ref|XP_003276933.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 27 [Nomascus
leucogenys]
Length = 788
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 165/350 (47%), Gaps = 42/350 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT P+++ D R C+ + C++C + +
Sbjct: 429 GLINLGNTCFMNCIVQALTHT-PILRDFFLSDRHR-CEMPSPELCLVCEMSSLFRELYSG 486
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
+ P KL+ + + Y+Q+DAHEFL LD L C D K + + +
Sbjct: 487 NPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDDVGKAANNPNHCN 546
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE------------------------ 263
I+ ++F G L S + C C S T +P D+SL+
Sbjct: 547 CIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGSCTSFWPMSPGRESSVNGESH 606
Query: 264 IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKT 323
I + +L L FT+ E + K C C+ KQL ++K+P VA FH KRF+
Sbjct: 607 IPGITTLTDCLRRFTRPEHLGS-SAKIKCGSCQSYQESTKQLTMNKLPVVACFHFKRFEH 665
Query: 324 DGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMGS 370
KI ++ FPLELD+ P+ + + S + E KY L+A+V H G+
Sbjct: 666 SAKQRRKITTYISFPLELDMTPFMASSKESRMNGQLQLPTNSGNNENKYSLFAVVNHQGT 725
Query: 371 SPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTE 420
+ GHY S+IR D W + +D+ +T+ + VL + Y+LFY KQ E
Sbjct: 726 LES-GHYTSFIRHHKDQWFKCDDAVITKASIKDVLDSEGYLLFYHKQVLE 774
>gi|402910176|ref|XP_003917765.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 27 [Papio anubis]
Length = 726
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 165/350 (47%), Gaps = 42/350 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT P+++ D R C+ + C++C + +
Sbjct: 367 GLINLGNTCFMNCIVQALTHT-PILRDFFLSDRHR-CEMPSPELCLVCEMSSLFRELYSG 424
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
+ P KL+ + + Y+Q+DAHEFL LD L C D K + + +
Sbjct: 425 NPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDDVGKAANNPNHCN 484
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE------------------------ 263
I+ ++F G L S + C C S T +P D+SL+
Sbjct: 485 CIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGSCTSFWPMSPGRESSVNGESH 544
Query: 264 IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKT 323
I + +L L FT+ E + K C C+ KQL ++K+P VA FH KRF+
Sbjct: 545 IPGITTLTDCLRRFTRPEHLGS-SAKIKCGSCQSYQESTKQLTMNKLPVVACFHFKRFEH 603
Query: 324 DGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMGS 370
KI ++ FPLELD+ P+ + + S + E KY L+A+V H G+
Sbjct: 604 SAKQRRKITTYISFPLELDMTPFMASSKESRMNGQLQLPTNSGNNENKYSLFAVVNHQGT 663
Query: 371 SPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTE 420
+ GHY S+IR D W + +D+ +T+ + VL + Y+LFY KQ E
Sbjct: 664 LES-GHYTSFIRHHKDQWFKCDDAVITKASIKDVLDSEGYLLFYHKQVLE 712
>gi|431914524|gb|ELK15774.1| Ubiquitin carboxyl-terminal hydrolase 22 [Pteropus alecto]
Length = 525
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 114/352 (32%), Positives = 166/352 (47%), Gaps = 43/352 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT PL++ D R C+ + C++C + + +
Sbjct: 177 GLINLGNTCFMNCIVQALTHT-PLLRDFFLSDRHR-CEMQSPSSCLVCEMSSLFQEFYSG 234
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
P KL+ + + Y+Q+DAHEFL LD L C D K + + +
Sbjct: 235 HRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHCN 294
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDV---------GSLGSA----- 273
I+ ++F G L S + C C S T +P D+SL++ GS GS
Sbjct: 295 CIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGSVVNGES 354
Query: 274 -----------LESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK 322
L FT+ E + K C C KQL + K+P VA FHLKRF+
Sbjct: 355 HVSGTTTLTDCLRRFTRPEHL-GSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFE 413
Query: 323 TDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMG 369
KI +V FPLELD+ P+ + + S + + KY L+A+V H G
Sbjct: 414 HSAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPADSLNNDNKYSLFAVVNHQG 473
Query: 370 SSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
+ + GHY S+IR D W + +D+ +T+ E VL + Y+LFY KQ E+
Sbjct: 474 TLES-GHYTSFIRQHKDQWFKCDDAIITKASIEDVLDSEGYLLFYHKQFLEY 524
>gi|323447154|gb|EGB03098.1| hypothetical protein AURANDRAFT_2843 [Aureococcus anophagefferens]
Length = 277
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 114/306 (37%), Positives = 153/306 (50%), Gaps = 29/306 (9%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+NA +QC H + Q L + V ALRD + +
Sbjct: 1 GLVNLGNTCFLNATIQCLAHAPGVAQTLGD----ESLHAQAQKPDVAVALRDALGGVFGA 56
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDN 228
S + PR+LV L + FQ +QEDAHEFL LLD +E LSS N
Sbjct: 57 S-RTFKPRELVKRLRAVGDQFQPGRQEDAHEFLLALLDAVEP----------PLSSTA-N 104
Query: 229 IVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIEDPET 288
V+ VFGG S L+C C S T EP +DLSLE + +L AL++FT E++E+ E
Sbjct: 105 PVRAVFGGRTSSTLRCPECDYESATEEPFLDLSLEPKP--TLARALDAFTAPEELENDE- 161
Query: 289 KFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPYTS 348
+ C C E+V K+L + P HL R+ G KI++HV F L+L+ T
Sbjct: 162 -WCCRCCGERVRPTKRLGVAAAPKALVVHLNRYDGRGG---KIEEHVAFEPRLELE-TTD 216
Query: 349 GGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQD 408
GG S Y L ++ H G S CGHY ++ R+ W +D+ V VL Q+
Sbjct: 217 GGAAS-----YGLVGVLVHRGQSTRCGHYTAFCRTRSGAWSCFDDAAVRTCTFAEVLRQE 271
Query: 409 AYILFY 414
AY+LFY
Sbjct: 272 AYMLFY 277
>gi|223005906|ref|NP_001138545.1| ubiquitin carboxyl-terminal hydrolase 27 [Homo sapiens]
gi|229558013|sp|A6NNY8.3|UBP27_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 27; AltName:
Full=Deubiquitinating enzyme 27; AltName: Full=Ubiquitin
carboxyl-terminal hydrolase 22-like; AltName:
Full=Ubiquitin thioesterase 27; AltName:
Full=Ubiquitin-specific-processing protease 27; AltName:
Full=X-linked ubiquitin carboxyl-terminal hydrolase 27
gi|119610336|gb|EAW89930.1| hCG1640930 [Homo sapiens]
gi|380785533|gb|AFE64642.1| ubiquitin carboxyl-terminal hydrolase 27 [Macaca mulatta]
gi|410213554|gb|JAA03996.1| ubiquitin specific peptidase 27, X-linked [Pan troglodytes]
gi|410299550|gb|JAA28375.1| ubiquitin specific peptidase 27, X-linked [Pan troglodytes]
Length = 438
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 165/350 (47%), Gaps = 42/350 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT P+++ D R C+ + C++C + +
Sbjct: 79 GLINLGNTCFMNCIVQALTHT-PILRDFFLSDRHR-CEMPSPELCLVCEMSSLFRELYSG 136
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
+ P KL+ + + Y+Q+DAHEFL LD L C D K + + +
Sbjct: 137 NPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDDVGKAANNPNHCN 196
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE------------------------ 263
I+ ++F G L S + C C S T +P D+SL+
Sbjct: 197 CIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGSCTSFWPMSPGRESSVNGESH 256
Query: 264 IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKT 323
I + +L L FT+ E + K C C+ KQL ++K+P VA FH KRF+
Sbjct: 257 IPGITTLTDCLRRFTRPEHL-GSSAKIKCGSCQSYQESTKQLTMNKLPVVACFHFKRFEH 315
Query: 324 DGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMGS 370
KI ++ FPLELD+ P+ + + S + E KY L+A+V H G+
Sbjct: 316 SAKQRRKITTYISFPLELDMTPFMASSKESRMNGQLQLPTNSGNNENKYSLFAVVNHQGT 375
Query: 371 SPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTE 420
+ GHY S+IR D W + +D+ +T+ + VL + Y+LFY KQ E
Sbjct: 376 LES-GHYTSFIRHHKDQWFKCDDAVITKASIKDVLDSEGYLLFYHKQVLE 424
>gi|359319450|ref|XP_851968.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22 [Canis lupus
familiaris]
Length = 474
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 114/352 (32%), Positives = 166/352 (47%), Gaps = 43/352 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT PL++ D R C+ + C++C + + +
Sbjct: 126 GLINLGNTCFMNCIVQALTHT-PLLRDFFLSDRHR-CEMQSPSSCLVCEMSSLFQEFYSG 183
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
P KL+ + + Y+Q+DAHEFL LD L C D K + + +
Sbjct: 184 HRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHCN 243
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDV---------GSLGSA----- 273
I+ ++F G L S + C C S T +P D+SL++ GS GS
Sbjct: 244 CIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGSVVNGES 303
Query: 274 -----------LESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK 322
L FT+ E + K C C KQL + K+P VA FHLKRF+
Sbjct: 304 HVAGTTTLTDCLRRFTRPEHL-GSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFE 362
Query: 323 TDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMG 369
KI +V FPLELD+ P+ + + S + + KY L+A+V H G
Sbjct: 363 HSAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG 422
Query: 370 SSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
+ + GHY S+IR D W + +D+ +T+ E VL + Y+LFY KQ E+
Sbjct: 423 TLES-GHYTSFIRQHKDQWFKCDDAIITKASIEDVLDSEGYLLFYHKQFLEY 473
>gi|255579710|ref|XP_002530694.1| cysteine-type endopeptidase, putative [Ricinus communis]
gi|223529750|gb|EEF31689.1| cysteine-type endopeptidase, putative [Ricinus communis]
Length = 777
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 106/312 (33%), Positives = 160/312 (51%), Gaps = 25/312 (8%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL N GN+C+ N ++QC T PL H + C +G+C C + I L
Sbjct: 355 GLRNCGNSCYANTVIQCLAFTRPLTSYFVRGLHSKSCK---KGWCFNCEFQLLI-LKARE 410
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDN 228
LSP +++ + I S ++EDAHEFL+ +D ++S L LS +
Sbjct: 411 GESPLSPIRILSKIQKIGSHLGHGREEDAHEFLRYAVDTMQSVFLKEAGSLVPLSEESTL 470
Query: 229 IVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE-DVGSLGSALESFTKLEKIEDPE 287
I +C C S+ +E ++DL++EI+ ++ SL AL FT E + D E
Sbjct: 471 I-------------KCMRCLGKSERFERIMDLTVEIDGNIESLEQALTQFTADEML-DGE 516
Query: 288 TKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPYT 347
K+ C +CK V +K+L + + P++ LKRF++ S K++K V FP LD+ PY
Sbjct: 517 NKYNCSRCKSYVKAKKKLTILEAPNILTIVLKRFQS--SNFGKLNKSVRFPEVLDMAPYM 574
Query: 348 SGGQNSDVELKYHLYAIVEH--MGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
G SD +Y LYA+V H S + GHY YI++S W +NDS V VE + VL
Sbjct: 575 CG--TSDKSPQYSLYAVVVHRDTMSDASTGHYVCYIKTSRGEWFGINDSIVKPVELKRVL 632
Query: 406 SQDAYILFYAKQ 417
++AY+L YA+
Sbjct: 633 LEEAYMLLYARH 644
>gi|384254219|gb|EIE27693.1| cysteine proteinase [Coccomyxa subellipsoidea C-169]
Length = 728
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 113/387 (29%), Positives = 181/387 (46%), Gaps = 14/387 (3%)
Query: 97 WPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDH-PRPCDGATEGFCVI 155
WP GL NLGN+CF NA LQC T P+ L S H R C FC +
Sbjct: 142 WPAADASDEGPTGLINLGNSCFANAALQCLMATRPMGAYLASGLHTSRGCPAPPGAFCPL 201
Query: 156 CALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDS 215
C L + + + + + L+ + +QED EFL L +E L
Sbjct: 202 CQL-ELLAREMRRGDGPATAQPLLHRVRLFCRDMVAGEQEDTSEFLNGLQTAVEHIMLHQ 260
Query: 216 KTKDESLSSQGD--NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEI-EDVGSLGS 272
L S+ ++ +FGG + C C + S +++P LS+EI ED+ +L
Sbjct: 261 AGSPAKLDSRSKETTLLHHIFGGYERMQNVCTVCCNVSASFDPFSMLSVEIDEDITTLED 320
Query: 273 ALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKID 332
AL +T E + + ++CEKCK+ V E++L + P+ LKRF + +K
Sbjct: 321 ALARYTHTELLAG-DNAYSCEKCKKDVEAERRLCFEVAPNTLQICLKRFVSVDGVPMKNS 379
Query: 333 KHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGS--SPTCGHYFSYIRSSPDTWHR 390
+ V+F +L+L P+ + +Y LY I+ H G+ SP GHY +Y+R + W
Sbjct: 380 QAVDFQEQLNLGPFMASAALDGGPARYRLYGIIVHEGTCNSPHSGHYVAYVRGADGQWWE 439
Query: 391 LNDSRVTRVEEEFVLSQDAYILFYAKQGTE-WVSSLLEAESIGMNA--DISNSSPKSVLD 447
ND++V +VLS+ AY+LFYA++ + L + ++ +A +S S P L
Sbjct: 440 CNDAQVYSCTTGYVLSRRAYMLFYAREAPRPSLPELAQLAAVPRSAATGVSGSKPSPTL- 498
Query: 448 NVENDYTSRSGVANAESCKANEPSASA 474
+N Y + + + +EPS+S+
Sbjct: 499 --QNGYEAGHAATMPSAAQGDEPSSSS 523
>gi|291407490|ref|XP_002719920.1| PREDICTED: ubiquitin thiolesterase 22 [Oryctolagus cuniculus]
Length = 803
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 108/350 (30%), Positives = 165/350 (47%), Gaps = 42/350 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT P+++ D R C+ + C++C + +
Sbjct: 444 GLINLGNTCFMNCIVQALTHT-PILRDFFLSDRHR-CEMPSPELCLVCEMSSLFRELYSG 501
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
+ P KL+ + + Y+Q+DAHEFL LD L C D K + + +
Sbjct: 502 NPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDDVGKAANNPNHCN 561
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIED--------------------- 266
I+ ++F G L S + C C S T +P D+SL++
Sbjct: 562 CIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGSSTSFWPMSPGRESSVNGESH 621
Query: 267 ---VGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKT 323
+ +L L FT+ E + K C C+ KQL ++K+P VA FH KRF+
Sbjct: 622 LPGISTLTDCLRRFTRPEHLGS-SAKIKCGGCQSYQESTKQLTMNKLPVVACFHFKRFEH 680
Query: 324 DGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMGS 370
KI ++ FPLELD+ P+ + + S + E KY L+A+V H G+
Sbjct: 681 SAKQRRKITTYISFPLELDMTPFMASSKESRINGQLQLPTNSGSNENKYSLFAVVNHQGT 740
Query: 371 SPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTE 420
+ GHY S+IR D W + +D+ +T+ + VL + Y+LFY KQ E
Sbjct: 741 LES-GHYTSFIRHHKDQWFKCDDAVITKASIKDVLDSEGYLLFYHKQVLE 789
>gi|223005910|ref|NP_062334.2| ubiquitin carboxyl-terminal hydrolase 27 [Mus musculus]
gi|226753949|sp|Q8CEG8.2|UBP27_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 27; AltName:
Full=Deubiquitinating enzyme 27; AltName: Full=Ubiquitin
thioesterase 27; AltName:
Full=Ubiquitin-specific-processing protease 27; AltName:
Full=X-linked ubiquitin carboxyl-terminal hydrolase 27
Length = 438
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 164/350 (46%), Gaps = 42/350 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT P+++ D R C+ + C++C + +
Sbjct: 79 GLINLGNTCFMNCIVQALTHT-PILRDFFLSDRHR-CEMPSPELCLVCEMSSLFRELYSG 136
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
+ P KL+ + + Y+Q+DAHEFL LD L C D K S + +
Sbjct: 137 NPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDDVGKVASNPNHCN 196
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE------------------------ 263
I+ ++F G L S + C C S T +P D+SL+
Sbjct: 197 CIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGSCTSFWPMSPGRESSLNGESH 256
Query: 264 IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKT 323
I + +L L FT+ E + K C C+ KQL + K+P VA FH KRF+
Sbjct: 257 IPGITTLTDCLRRFTRPEHLGS-SAKIKCGSCQSYQESTKQLTMKKLPVVACFHFKRFEH 315
Query: 324 DGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMGS 370
KI ++ FPLELD+ P+ + + + V E KY L+A+V H G+
Sbjct: 316 SAKQRRKITTYISFPLELDMTPFMASSKETRVNGQLQLPTNSANNENKYSLFAVVNHQGT 375
Query: 371 SPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTE 420
+ GHY S+IR D W + +D+ +T+ + VL + Y+LFY KQ E
Sbjct: 376 LES-GHYTSFIRHHRDQWFKCDDAVITKASIKDVLDSEGYLLFYHKQVLE 424
>gi|395748703|ref|XP_002827183.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22 [Pongo abelii]
Length = 746
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 110/352 (31%), Positives = 164/352 (46%), Gaps = 43/352 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT PL++ D R C+ + C++C + + +
Sbjct: 398 GLINLGNTCFMNCIVQALTHT-PLLRDFFLSDRHR-CEMQSPSSCLVCEMSSLFQEFYSG 455
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
P KL+ + + Y+Q+DAHEFL LD L C D K + + +
Sbjct: 456 HRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHCN 515
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE------------------------ 263
I+ ++F G L S + C C S T +P D+SL+
Sbjct: 516 CIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGNVVNGES 575
Query: 264 -IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK 322
+ +L L FT+ E + K C C KQL + K+P VA FHLKRF+
Sbjct: 576 HVSGTTTLTDCLRRFTRPEHLGS-SAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFE 634
Query: 323 TDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMG 369
KI +V FPLELD+ P+ + + S + + KY L+A+V H G
Sbjct: 635 HSAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG 694
Query: 370 SSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
+ + GHY S+IR D W + +D+ +T+ + VL + Y+LFY KQ E+
Sbjct: 695 TLES-GHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHKQFLEY 745
>gi|194750190|ref|XP_001957513.1| GF23992 [Drosophila ananassae]
gi|251765094|sp|B3M3M6.1|UBP36_DROAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 36; AltName:
Full=Deubiquitinating enzyme 36; AltName: Full=Protein
scrawny; AltName: Full=Ubiquitin thioesterase 36;
AltName: Full=Ubiquitin-specific-processing protease 36
gi|190624795|gb|EDV40319.1| GF23992 [Drosophila ananassae]
Length = 1091
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 124/427 (29%), Positives = 198/427 (46%), Gaps = 53/427 (12%)
Query: 1 METNTSKTLDDETDLVFAREIVDEKTLDPSWSS----PETLHDHLHPSNHPLTLTDLDKD 56
+ NT+ T ++ + A +IV D + P H+H +P+ H +L K
Sbjct: 95 LNGNTANTFGNKNN---AGKIVGANGHDNNGRKLSDHPNQNHNHANPNGHHANPNELPKP 151
Query: 57 QNNDDDDDYEEIYRDTRPISSSYGRYNWGSSLLSRPVEKHWPIQIKPTGVGAGLENLGNT 116
+ R P + R W S E+ W VG+G+ N GNT
Sbjct: 152 K------------RVLYPRENI--RIGWKQS------ERKWQ-------VGSGMINAGNT 184
Query: 117 CFINAILQCFTHTLPLVQALRSFD-HPRPCDGATEG-FCVICALRDHIELSLASSGKVLS 174
C++N+ LQ H L L S H C+ + G FC+ICA+ ++ + + V
Sbjct: 185 CYLNSTLQALFHIPALANWLVSEQAHMENCNVSESGSFCIICAMAKTLQATQTTQSAV-R 243
Query: 175 PRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDNIVQ--- 231
P + L I +QEDAHEFL+ L++ +E L + L D +V+
Sbjct: 244 PFLIYTKLKQICKHMIVGRQEDAHEFLRFLVEAMERAYLMRFRNYKEL----DQLVKETT 299
Query: 232 ---RVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIEDPET 288
++FGG L S+++C +C S T++ DL L+I SL A E + EK+ED
Sbjct: 300 PLGQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIRKSDSLEEAFEGYFSREKLED--F 357
Query: 289 KFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPYTS 348
+ CE CK++VS KQ L++ P LKRF G+ K+ K + F +DL + +
Sbjct: 358 GYKCEGCKKKVSATKQFRLERAPITLCIQLKRFSMMGN---KLTKQITFKPRIDLSKFAA 414
Query: 349 GGQNSDVE-LKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQ 407
+ V+ L Y L ++V H+G S CGHY + + +++ +DS V + + V +
Sbjct: 415 RSPAASVQPLIYRLVSMVTHLGVSQHCGHYTAIGSTEAGSYYNFDDSYVRPIAIQSVCNT 474
Query: 408 DAYILFY 414
+AYI+FY
Sbjct: 475 NAYIMFY 481
>gi|50305101|ref|XP_452509.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641642|emb|CAH01360.1| KLLA0C06974p [Kluyveromyces lactis]
Length = 446
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 112/316 (35%), Positives = 162/316 (51%), Gaps = 16/316 (5%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL N+G+TCF+++I+Q H V+ L S H CD + CV CAL D I
Sbjct: 134 GLVNMGSTCFMSSIIQTIIHNPYFVEDLLSHKHCNNCDIKSGTKCVSCAL-DEIACDFYG 192
Query: 169 ----SGKVLSPRKLVDNL----NYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDE 220
+GK S K NL +I+ Q+DAHE+ Q LL++L + ++
Sbjct: 193 NGPGTGKSSSVSKGFVNLLSASWHINHHLVGSSQQDAHEYWQFLLNQLHT--DHARVFGS 250
Query: 221 SLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKL 280
S + I R+F G L + LQC CG T +P++DLSLEI++ L L+ F +
Sbjct: 251 SKAPDCQCITHRIFQGYLKNTLQCSQCGFSKTTIDPIMDLSLEIKNNPKLEDCLDHFQRE 310
Query: 281 EKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTD-GSYVVKIDKHVEFPL 339
E + D + C+ CK+ V KQL L K P+V LKRF+ K++ V+FPL
Sbjct: 311 ETLTD--FHYECQSCKQNQGVVKQLTLHKAPNVLVIQLKRFEHQLNGQSAKLNDRVQFPL 368
Query: 340 ELDLKPYTSGGQNSDV-ELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTR 398
L+LKP+ ++ + + Y L +V H G+ GHY + ++ W + NDS VT
Sbjct: 369 HLNLKPHLFQIEDEYIPNIAYDLLNVVSHQGTVDQ-GHYTTVSKTEDGQWFKFNDSVVTS 427
Query: 399 VEEEFVLSQDAYILFY 414
V EE VL Q AY+LFY
Sbjct: 428 VTEEQVLEQQAYLLFY 443
>gi|440912738|gb|ELR62279.1| Ubiquitin carboxyl-terminal hydrolase 22-A, partial [Bos grunniens
mutus]
Length = 541
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 165/350 (47%), Gaps = 42/350 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT P+++ D R C+ + C++C + +
Sbjct: 169 GLINLGNTCFMNCIVQALTHT-PILRDFFLSDRHR-CEMPSPELCLVCEMSSLFRELYSG 226
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
+ P KL+ + + Y+Q+DAHEFL LD L C D K S + +
Sbjct: 227 NPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDDAGKAASNPNHCN 286
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE------------------------ 263
I+ ++F G L S + C C S T +P D+SL+
Sbjct: 287 CIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGSCTSFWPMSPGRESSVNGESH 346
Query: 264 IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKT 323
I + +L L FT+ E + K C C+ KQL ++K+P VA FH KRF+
Sbjct: 347 IPGITTLTDCLRRFTRPEHL-GSSAKIKCGSCQSYQESTKQLTMNKLPVVACFHFKRFEH 405
Query: 324 DGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMGS 370
KI ++ FPLELD+ P+ + + S + E KY L+A+V H G+
Sbjct: 406 SAKQRRKITTYISFPLELDMTPFMASSKESRMNGQLQLPTNSGNDENKYSLFAVVNHQGT 465
Query: 371 SPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTE 420
+ GHY S+IR D W + +D+ +T+ + VL + Y+LFY KQ E
Sbjct: 466 LES-GHYTSFIRHHKDQWFKCDDAVITKASIKDVLDSEGYLLFYHKQVLE 514
>gi|392343086|ref|XP_003754792.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A-like [Rattus
norvegicus]
Length = 837
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/350 (31%), Positives = 165/350 (47%), Gaps = 42/350 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT P+++ D R C+ + C++C + +
Sbjct: 478 GLINLGNTCFMNCIVQALTHT-PILRDFFLSDRHR-CEMPSPELCLVCEMSSLFRELYSG 535
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
+ P KL+ + + Y+Q+DAHEFL LD L C D K S + +
Sbjct: 536 NPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDDVGKVASNPNHCN 595
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE------------------------ 263
I+ ++F G L S + C C S T +P D+SL+
Sbjct: 596 CIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGSCTSFWPMSPGRESSLNGESH 655
Query: 264 IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKT 323
I V +L L FT+ E + K C C+ KQL + K+P VA FH KRF+
Sbjct: 656 IPGVTTLTDCLRRFTRPEHLGS-SAKIKCGSCQSYQESTKQLTMKKLPVVACFHFKRFEH 714
Query: 324 DGSYVVKIDKHVEFPLELDLKPYTSGGQ----NSDVEL---------KYHLYAIVEHMGS 370
KI ++ FPLELD+ P+ + + N ++L KY L+A+V H G+
Sbjct: 715 SAKQRRKITTYISFPLELDMTPFMASSKETRMNGQLQLPTNSGNNENKYSLFAVVNHQGT 774
Query: 371 SPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTE 420
+ GHY S+IR D W + +D+ +T+ + VL + Y+LFY KQ E
Sbjct: 775 LES-GHYTSFIRHHRDQWFKCDDAVITKASIKDVLDSEGYLLFYHKQVLE 823
>gi|348553656|ref|XP_003462642.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 27-like [Cavia
porcellus]
Length = 806
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 165/350 (47%), Gaps = 42/350 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT P+++ D R C+ + C++C + +
Sbjct: 447 GLINLGNTCFMNCIVQALTHT-PILRDFFLSDRHR-CEMPSPELCLVCEMSSLFRELYSG 504
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
+ P KL+ + + Y+Q+DAHEFL LD L C D K + + +
Sbjct: 505 NPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDDVGKAANNPNHCN 564
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE------------------------ 263
I+ ++F G L S + C C S T +P D+SL+
Sbjct: 565 CIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGSCTSFWPMSPGRETSVNGESH 624
Query: 264 IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKT 323
I + +L L FT+ E + K C C+ KQL ++K+P VA FH KRF+
Sbjct: 625 IPGITTLTDCLRRFTRPEHL-GSSAKIKCGSCQSYQESTKQLTMNKLPVVACFHFKRFEH 683
Query: 324 DGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMGS 370
KI ++ FPLELD+ P+ + + S + E KY L+A+V H G+
Sbjct: 684 SAKQRRKITTYISFPLELDMTPFMASSKESRMNGQLQLPTNSGNNENKYSLFAVVNHQGT 743
Query: 371 SPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTE 420
+ GHY S+IR D W + +D+ +T+ + VL + Y+LFY KQ E
Sbjct: 744 LES-GHYTSFIRHHKDQWFKCDDAVITKASIKDVLDSEGYLLFYHKQVLE 792
>gi|84995308|ref|XP_952376.1| ubiquitin carboxy-terminal hydrolase [Theileria annulata strain
Ankara]
gi|65302537|emb|CAI74644.1| ubiquitin carboxy-terminal hydrolase, putative [Theileria annulata]
Length = 632
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 110/330 (33%), Positives = 166/330 (50%), Gaps = 24/330 (7%)
Query: 106 VGAGLENLG-NTCFINAILQCFTHTLPLVQALRSFDHPRPC-DGATEGFCVICALRDHIE 163
+GAGL N G N C++N I+Q THT L +L H + C + FC++C ++++
Sbjct: 80 MGAGLNNPGINICYMNVIIQVLTHTPFLASSLLKSYHSKTCLHYEKDIFCIMCLFENYVK 139
Query: 164 LSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRL-ESCCLDSK----TK 218
S AS + +P + +I S F+ Q+DA FL+ LD L ++C L+SK +
Sbjct: 140 KSFASPNPLNNPFYSIAK-KFIWSRFKLGHQDDAFIFLKHFLDSLSKACYLNSKESEKQE 198
Query: 219 DESLSSQG-----------DNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDV 267
D S ++ G ++ R+FGG + + C NC S+ E DL++E+
Sbjct: 199 DGSETTSGPKDFISNDQIMSTVIGRLFGGYFRNVIVCNNCSRKSEKVEEFFDLAVEVTKS 258
Query: 268 GSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSY 327
L L F EK+ + + K+ C CK + K L + K P + +LKRF S
Sbjct: 259 NRLIDLLSEFVLPEKLTN-DNKYFCSNCKSYQNANKSLSIYKAPRILNINLKRFNLYSSV 317
Query: 328 VVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDT 387
K K +EFP L + TS ++S L Y LYAIV H+G S GHY ++I+
Sbjct: 318 YKKSLKAIEFPQLLSISLKTS--EDSYTWLNYDLYAIVCHIGKSLHMGHYITFIKGKHGF 375
Query: 388 WHRLNDSRVTRVEEEFVLSQ--DAYILFYA 415
W+R +DS + V E VLS D Y+LFY+
Sbjct: 376 WYRFDDSIIQCVSESTVLSHNNDVYLLFYS 405
>gi|405117812|gb|AFR92587.1| ubiquitin C-terminal hydrolase Ubp16 [Cryptococcus neoformans var.
grubii H99]
Length = 624
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 110/378 (29%), Positives = 177/378 (46%), Gaps = 43/378 (11%)
Query: 97 WPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVIC 156
WP I AGL N C+ NA LQ HT P+++ + D + FC++C
Sbjct: 100 WPEAIATAKRAAGLHNPSMACYANATLQVLLHTPPVLRIALTHDEGSCSQIKKKNFCMLC 159
Query: 157 ALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSK 216
+L+ E S S K +P + +L+ I F + +QED HEF + + D L++ L +K
Sbjct: 160 SLKHMAEGSHWSGRKAYAP-GIHRSLSQIKKGFSKNRQEDTHEFFRFVTDALQNTAL-AK 217
Query: 217 TKDESLSSQGDNI-----------------VQRVFGGCLISKLQCCNCGSCSDTYEPLID 259
L N V R++GG + S++ C C + SDT++ +D
Sbjct: 218 LPKSVLHYHQQNFAHKTSRDIPEKIKHTSWVYRIWGGRVRSRVVCSRCNNPSDTFDSFLD 277
Query: 260 LSLEIEDVG--SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFH 317
LSL++ G S+ L FTK +K+E + K+ CE+CK + + K +D+ P + H
Sbjct: 278 LSLDVNKQGKKSVLGMLAGFTKEDKLEG-DNKYHCERCKRKANATKSFKIDQAPPILTLH 336
Query: 318 LKRFKTDGSY------VVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSS 371
LKRF + ++ K ++ ++F LD+ PY +S KY L+ + H G+
Sbjct: 337 LKRFSVNYNHYSGRARAEKFNQPIKFEQTLDIAPYMVNPGSSGT--KYRLFGVTCHRGTE 394
Query: 372 PTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLS-QDAYILFY-----AKQG------- 418
GHY SY+R W +D V+ V+ VL+ + AY+L Y K+G
Sbjct: 395 LRFGHYTSYVRGPSGQWFHADDDDVSPVQLVQVLNDKTAYLLSYIRVENGKEGLCESPAV 454
Query: 419 TEWVSSLLEAESIGMNAD 436
+ V+ L+ + GM D
Sbjct: 455 KDRVNGLVNGNARGMRND 472
>gi|395753974|ref|XP_002831695.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 27 [Pongo abelii]
Length = 665
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 165/350 (47%), Gaps = 42/350 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT P+++ D R C+ + C++C + +
Sbjct: 306 GLINLGNTCFMNCIVQALTHT-PILRDFFLSDRHR-CEMPSPELCLVCEMSSLFRELYSG 363
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
+ P KL+ + + Y+Q+DAHEFL LD L C D K + + +
Sbjct: 364 NPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDDVGKAANNPNHCN 423
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE------------------------ 263
I+ ++F G L S + C C S T +P D+SL+
Sbjct: 424 CIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGSCTSFWPMSPGRESSVNGESH 483
Query: 264 IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKT 323
I + +L L FT+ E + K C C+ KQL ++K+P VA FH KRF+
Sbjct: 484 IPGITTLTDCLRRFTRPEHL-GSSAKIKCGSCQSYQESTKQLTMNKLPVVACFHFKRFEH 542
Query: 324 DGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMGS 370
KI ++ FPLELD+ P+ + + S + E KY L+A+V H G+
Sbjct: 543 SAKQRRKITTYISFPLELDMTPFMASSKESRMNGQLQLPTNSGNNENKYSLFAVVNHQGT 602
Query: 371 SPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTE 420
+ GHY S+IR D W + +D+ +T+ + VL + Y+LFY KQ E
Sbjct: 603 LES-GHYTSFIRHHKDQWFKCDDAVITKASIKDVLDSEGYLLFYHKQVLE 651
>gi|426258083|ref|XP_004022649.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A-like, partial
[Ovis aries]
Length = 557
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 165/350 (47%), Gaps = 42/350 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT P+++ D R C+ + C++C + +
Sbjct: 198 GLINLGNTCFMNCIVQALTHT-PILRDFFLSDRHR-CEMPSPELCLVCEMSSLFRELYSG 255
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
+ P KL+ + + Y+Q+DAHEFL LD L C D K S + +
Sbjct: 256 NPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDDAGKAASNPNHCN 315
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE------------------------ 263
I+ ++F G L S + C C S T +P D+SL+
Sbjct: 316 CIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGSCTSFWPMSPGRESSVNGESH 375
Query: 264 IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKT 323
I + +L L FT+ E + K C C+ KQL ++K+P VA FH KRF+
Sbjct: 376 IPGITTLTDCLRRFTRPEHL-GSSAKIKCGSCQSYQESTKQLTMNKLPVVACFHFKRFEH 434
Query: 324 DGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMGS 370
KI ++ FPLELD+ P+ + + S + E KY L+A+V H G+
Sbjct: 435 SAKQRRKITTYISFPLELDMTPFMASSKESRMNGQLQLPTNSGNDENKYSLFAVVNHQGT 494
Query: 371 SPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTE 420
+ GHY S+IR D W + +D+ +T+ + VL + Y+LFY KQ E
Sbjct: 495 LES-GHYTSFIRHHKDQWFKCDDAVITKASIKDVLDSEGYLLFYHKQVLE 543
>gi|392355526|ref|XP_003752062.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A-like [Rattus
norvegicus]
Length = 912
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/350 (31%), Positives = 165/350 (47%), Gaps = 42/350 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT P+++ D R C+ + C++C + +
Sbjct: 553 GLINLGNTCFMNCIVQALTHT-PILRDFFLSDRHR-CEMPSPELCLVCEMSSLFRELYSG 610
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
+ P KL+ + + Y+Q+DAHEFL LD L C D K S + +
Sbjct: 611 NPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDDVGKVASNPNHCN 670
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE------------------------ 263
I+ ++F G L S + C C S T +P D+SL+
Sbjct: 671 CIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGSCTSFWPMSPGRESSLNGESH 730
Query: 264 IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKT 323
I V +L L FT+ E + K C C+ KQL + K+P VA FH KRF+
Sbjct: 731 IPGVTTLTDCLRRFTRPEHLGS-SAKIKCGSCQSYQESTKQLTMKKLPVVACFHFKRFEH 789
Query: 324 DGSYVVKIDKHVEFPLELDLKPYTSGGQ----NSDVEL---------KYHLYAIVEHMGS 370
KI ++ FPLELD+ P+ + + N ++L KY L+A+V H G+
Sbjct: 790 SAKQRRKITTYISFPLELDMTPFMASSKETRMNGQLQLPTNSGNNENKYSLFAVVNHQGT 849
Query: 371 SPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTE 420
+ GHY S+IR D W + +D+ +T+ + VL + Y+LFY KQ E
Sbjct: 850 LES-GHYTSFIRHHRDQWFKCDDAVITKASIKDVLDSEGYLLFYHKQVLE 898
>gi|410980119|ref|XP_003996426.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22 [Felis catus]
Length = 470
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 114/352 (32%), Positives = 166/352 (47%), Gaps = 43/352 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT PL++ D R C+ + C++C + + +
Sbjct: 122 GLINLGNTCFMNCIVQALTHT-PLLRDFFLSDRHR-CEMQSPSSCLVCEMSSLFQEFYSG 179
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
P KL+ + + Y+Q+DAHEFL LD L C D K + + +
Sbjct: 180 HRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHCN 239
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDV---------GSLGSA----- 273
I+ ++F G L S + C C S T +P D+SL++ GS GS
Sbjct: 240 CIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGSVVNGES 299
Query: 274 -----------LESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK 322
L FT+ E + K C C KQL + K+P VA FHLKRF+
Sbjct: 300 HVAGTTTLTDCLRRFTRPEHL-GSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFE 358
Query: 323 TDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMG 369
KI +V FPLELD+ P+ + + S + + KY L+A+V H G
Sbjct: 359 HSAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG 418
Query: 370 SSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
+ + GHY S+IR D W + +D+ +T+ E VL + Y+LFY KQ E+
Sbjct: 419 TLES-GHYTSFIRQHKDQWFKCDDAIITKASIEDVLDSEGYLLFYHKQFLEY 469
>gi|397468706|ref|XP_003806014.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 27 [Pan paniscus]
Length = 642
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 165/350 (47%), Gaps = 42/350 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT P+++ D R C+ + C++C + +
Sbjct: 283 GLINLGNTCFMNCIVQALTHT-PILRDFFLSDRHR-CEMPSPELCLVCEMSSLFRELYSG 340
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
+ P KL+ + + Y+Q+DAHEFL LD L C D K + + +
Sbjct: 341 NPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDDVGKAANNPNHCN 400
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE------------------------ 263
I+ ++F G L S + C C S T +P D+SL+
Sbjct: 401 CIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGSCTSFWPMSPGRESSVNGESH 460
Query: 264 IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKT 323
I + +L L FT+ E + K C C+ KQL ++K+P VA FH KRF+
Sbjct: 461 IPGITTLTDCLRRFTRPEHL-GSSAKIKCGSCQSYQESTKQLTMNKLPVVACFHFKRFEH 519
Query: 324 DGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMGS 370
KI ++ FPLELD+ P+ + + S + E KY L+A+V H G+
Sbjct: 520 SAKQRRKITTYISFPLELDMTPFMASSKESRMNGQLQLPTNSGNNENKYSLFAVVNHQGT 579
Query: 371 SPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTE 420
+ GHY S+IR D W + +D+ +T+ + VL + Y+LFY KQ E
Sbjct: 580 LES-GHYTSFIRHHKDQWFKCDDAVITKASIKDVLDSEGYLLFYHKQVLE 628
>gi|91089399|ref|XP_974056.1| PREDICTED: similar to non-stop CG4166-PA [Tribolium castaneum]
gi|270012546|gb|EFA08994.1| hypothetical protein TcasGA2_TC006701 [Tribolium castaneum]
Length = 482
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 103/327 (31%), Positives = 164/327 (50%), Gaps = 18/327 (5%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLG TCF+N I+Q HT L + +H C G + G C++C + +
Sbjct: 159 GLLNLGQTCFMNCIVQALMHTPLLRDYFLTEEHN--CKGMS-GRCLVCEVSKLFQEFYNG 215
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL----DSKTKDESLSS 224
+ L+ +L+ + + Y+Q+DAHEF LD L CL D K + +S
Sbjct: 216 TRVPLALHELLHLIWTHARHLAGYEQQDAHEFFIATLDVLHQHCLETMPDLKPVNVGKNS 275
Query: 225 QGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVG-------SLGSALESF 277
+ I+ ++F G L S + C C S T +P+ D SL++ V SL LE F
Sbjct: 276 RCPCIIDQIFTGGLQSDVVCQKCNGVSTTIDPISDFSLDLGPVTVGGRPPTSLVDCLERF 335
Query: 278 TKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEF 337
T+ E + + +K C C+ + KQL ++ +P V +FHLKRF+ KI + F
Sbjct: 336 TRAEHLGE-NSKIMCSNCQSKQESTKQLTMNTLPIVISFHLKRFQHMNEMEKKISTTISF 394
Query: 338 PLELDLKPYTSGGQNSD---VELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDS 394
P LD+ P+ S + + +Y L+A++ H+G+S GHY +Y+R D W++ +D
Sbjct: 395 PEMLDMTPFMSRSKTDSPFPSDNRYSLFAVINHIGNSINVGHYTAYVRQLQDYWYKCDDH 454
Query: 395 RVTRVEEEFVLSQDAYILFYAKQGTEW 421
+TR + VL + Y+LFY K ++
Sbjct: 455 VITRATLKEVLDSEGYLLFYHKHVLDY 481
>gi|5689463|dbj|BAA83015.1| KIAA1063 protein [Homo sapiens]
Length = 593
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 110/352 (31%), Positives = 164/352 (46%), Gaps = 43/352 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT PL++ D R C+ + C++C + + +
Sbjct: 245 GLINLGNTCFMNCIVQALTHT-PLLRDFFLSDRHR-CEMQSPSSCLVCEMSSLFQEFYSG 302
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
P KL+ + + Y+Q+DAHEFL LD L C D K + + +
Sbjct: 303 HRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHCN 362
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE------------------------ 263
I+ ++F G L S + C C S T +P D+SL+
Sbjct: 363 CIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGNVVNGES 422
Query: 264 -IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK 322
+ +L L FT+ E + K C C KQL + K+P VA FHLKRF+
Sbjct: 423 HVSGTTTLTDCLRRFTRPEHLGS-SAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFE 481
Query: 323 TDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMG 369
KI +V FPLELD+ P+ + + S + + KY L+A+V H G
Sbjct: 482 HSAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG 541
Query: 370 SSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
+ + GHY S+IR D W + +D+ +T+ + VL + Y+LFY KQ E+
Sbjct: 542 TLES-GHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHKQFLEY 592
>gi|134106815|ref|XP_777949.1| hypothetical protein CNBA4180 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260649|gb|EAL23302.1| hypothetical protein CNBA4180 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 659
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 100/345 (28%), Positives = 167/345 (48%), Gaps = 29/345 (8%)
Query: 97 WPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVIC 156
WP I AGL N C+ NA LQ HT P+++ + D + FC++C
Sbjct: 136 WPEAIATAKRAAGLHNPSMACYANATLQVLLHTPPVLRIALTHDEGSCSQIKKKNFCMLC 195
Query: 157 ALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL--- 213
+L+ E S S K +P + +L+ I F + +QED HEF + + D L++ L
Sbjct: 196 SLKHMAEGSHWSGRKAYAP-GIHRSLSQIKKGFSKNRQEDTHEFFRFVTDALQNTALAKL 254
Query: 214 -------------DSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDL 260
+ ++D + + V R++GG + S++ C C + SDT++ +DL
Sbjct: 255 PKCVLPYNHRKFAHTTSRDTPEKIKHTSWVYRIWGGRVRSRVVCSRCNNPSDTFDSFLDL 314
Query: 261 SLEIEDVG--SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHL 318
SL++ G S+ L FTK +++E + K+ CE+CK + + K +D+ P + HL
Sbjct: 315 SLDVNKQGKKSVLGMLAGFTKEDRLEG-DNKYHCERCKRKANATKSFKIDQAPPILTLHL 373
Query: 319 KRFKTD------GSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSP 372
KRF + + K ++ ++F LD+ PY + KY L+ + H G+
Sbjct: 374 KRFSVNYNPYSGRARAEKFNQPIKFEQTLDIAPYMVDPASPGT--KYRLFGVTCHRGTEL 431
Query: 373 TCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLS-QDAYILFYAK 416
GHY SY+R W +D V+ V+ E VL+ + AY+L Y +
Sbjct: 432 RFGHYTSYVRGPSGQWFHADDDEVSPVQLEQVLNDKTAYLLSYIR 476
>gi|348502347|ref|XP_003438729.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like
[Oreochromis niloticus]
Length = 506
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 113/350 (32%), Positives = 168/350 (48%), Gaps = 41/350 (11%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT PL++ D + C+ + C++C + + +
Sbjct: 160 GLINLGNTCFMNCIVQALTHT-PLLRDFFLSDRHK-CEMQSNS-CLVCEMSQLFQEFYSG 216
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDN 228
P +L+ + + Y+Q+DAHEFL LD L C D K + + +
Sbjct: 217 HRSPHIPFRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKDDNGKKANNPNHCNC 276
Query: 229 IVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDV---------GSLGSAL--ESF 277
I+ ++F G L S + C C S T +P D+SL++ G GSAL ES
Sbjct: 277 IIDQIFTGGLQSDVTCQACHGVSTTIDPFWDISLDLPGSSTPFWPLSPGGDGSALNGESH 336
Query: 278 TK--------LEKIEDPE-----TKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTD 324
T L + PE K C C KQL + K+P VA FHLKRF+
Sbjct: 337 TTGATTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHS 396
Query: 325 GSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMGSS 371
KI +V FPLELD+ P+ + + S + + KY L+A+V H G+
Sbjct: 397 AKLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQTVDPFNNDNKYSLFAVVNHQGTL 456
Query: 372 PTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
+ GHY ++IR D W + +D+ +T+ + VL + Y+LFY KQ E+
Sbjct: 457 ES-GHYTTFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHKQFLEY 505
>gi|449662479|ref|XP_002167244.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Hydra
magnipapillata]
Length = 503
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 115/352 (32%), Positives = 168/352 (47%), Gaps = 54/352 (15%)
Query: 108 AGLENLGNTCFINAILQCFTHT---------LPLV---------QALRSFDHPRPCDGAT 149
GL NLGNTCF+NAILQ ++ LP + Q + + D +
Sbjct: 149 VGLRNLGNTCFMNAILQSLSNLKYFSGYFKELPAIELNVKNMDEQTKKYYTRSYQSDDIS 208
Query: 150 ---EGFCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLD 206
E V+CAL S +SP L + + F+ YQQ DAHEF+ CLLD
Sbjct: 209 LVEELRKVLCALWQQ------GSNTAISPESLFTVVWKVVPRFRGYQQHDAHEFMHCLLD 262
Query: 207 RLESCCLDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEI-- 264
R+ + L SK ++ D I+ +FGG L S + C CG+ S E DLSL+I
Sbjct: 263 RVHNELLTSK----RFTNGCDTIISGIFGGQLQSDVTCLTCGTISKKQEAYRDLSLDIPF 318
Query: 265 -------------EDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVP 311
L L+SF ++E +++ E + CEKC ++ K+ + ++P
Sbjct: 319 KPKLKTSPGKKKTPSACQLIDCLQSFVEMETLDESEW-YMCEKCNKKQPSTKKFWILRLP 377
Query: 312 SVAAFHLKRFKTDGSYVVKIDKHVEFPL-ELDLKPYT--SGGQNSDVELKYHLY---AIV 365
+V HLKRF+ K+D V FP+ EL++ P+ + + + + +K HLY A V
Sbjct: 378 NVLCLHLKRFRYSPLARTKVDTFVRFPIKELNMDPFILKTNQKTNRMSIKAHLYDLAACV 437
Query: 366 EHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQ 417
H GS GHY +Y R +W+ NDS V+ EE + AYILFY +Q
Sbjct: 438 VHHGSGAGSGHYTTYARHE-GSWYNFNDSSVSLTNEESIQHCKAYILFYTRQ 488
>gi|198470304|ref|XP_001355290.2| GA13118 [Drosophila pseudoobscura pseudoobscura]
gi|198145386|gb|EAL32347.2| GA13118 [Drosophila pseudoobscura pseudoobscura]
Length = 872
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 110/335 (32%), Positives = 167/335 (49%), Gaps = 38/335 (11%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL N+GNTCF+N+++QC +HT L + LR+ R AT+ ++ I+ S
Sbjct: 548 GLRNIGNTCFMNSVIQCLSHTTELTRFLRTHHGSRSS--ATKDQLILFEFAKLIQEMWTS 605
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESL------ 222
S ++P L + + Y Q+DA EFL+ LD L S L+S K E+L
Sbjct: 606 SVHTVTPMDLKRAFSAKHRMYSDYNQQDAQEFLRFFLDSLHS-ALNSGIKGETLNIDDNL 664
Query: 223 -------------SSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVG- 268
+ +++V+ +F G L S L+C CG+ S T++P DLS+ +
Sbjct: 665 SDNKKADLTWEWYTRHENSLVRDLFVGQLKSTLKCTTCGNTSVTFDPFWDLSVPLPSSSR 724
Query: 269 -SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSY 327
L + L+ F + E+I D + TC KCK + K + + P HLKRF +
Sbjct: 725 CKLEACLDLFIR-EEILDGDEMPTCSKCKTRRKCTKSFTIQRFPKYLVIHLKRFSE--TR 781
Query: 328 VVKIDKHVEFPL---ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSS 384
K+ VEFP +L++ Y G NS+ + Y LYAI HMGS T G +++ +
Sbjct: 782 WSKLSNIVEFPTADRDLNMASY---GANSNSNVHYSLYAISNHMGS--TAGGHYTALCKH 836
Query: 385 PDT--WHRLNDSRVT-RVEEEFVLSQDAYILFYAK 416
P + WH ND+ V+ V E F++S AYILFY +
Sbjct: 837 PVSRKWHEFNDNIVSDSVSENFLVSSSAYILFYER 871
>gi|301764739|ref|XP_002917826.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 27-like
[Ailuropoda melanoleuca]
Length = 596
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 165/350 (47%), Gaps = 42/350 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT P+++ D R C+ + C++C + +
Sbjct: 237 GLINLGNTCFMNCIVQALTHT-PILRDFFLSDRHR-CEMPSPELCLVCEMSSLFRELYSG 294
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
+ P KL+ + + Y+Q+DAHEFL LD L C D K + + +
Sbjct: 295 NPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDDAGKAANNPNHCN 354
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE------------------------ 263
I+ ++F G L S + C C S T +P D+SL+
Sbjct: 355 CIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGSCTSFWPMSPGRESSVNGESH 414
Query: 264 IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKT 323
I + +L L FT+ E + K C C+ KQL ++K+P VA FH KRF+
Sbjct: 415 IPGITTLTDCLRRFTRPEHL-GSSAKIKCGSCQSYQESTKQLTMNKLPVVACFHFKRFEH 473
Query: 324 DGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMGS 370
KI ++ FPLELD+ P+ + + S + E KY L+A+V H G+
Sbjct: 474 SAKQRRKITTYISFPLELDMTPFMASSKESRMNGQLQLPTNSGNDENKYSLFAVVNHQGT 533
Query: 371 SPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTE 420
+ GHY S+IR D W + +D+ +T+ + VL + Y+LFY KQ E
Sbjct: 534 LES-GHYTSFIRHHKDQWFKCDDAVITKASIKDVLDSEGYLLFYHKQVLE 582
>gi|119623000|gb|EAX02595.1| hCG28655 [Homo sapiens]
Length = 556
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 110/352 (31%), Positives = 164/352 (46%), Gaps = 43/352 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT PL++ D R C+ + C++C + + +
Sbjct: 208 GLINLGNTCFMNCIVQALTHT-PLLRDFFLSDRHR-CEMQSPSSCLVCEMSSLFQEFYSG 265
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
P KL+ + + Y+Q+DAHEFL LD L C D K + + +
Sbjct: 266 HRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHCN 325
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE------------------------ 263
I+ ++F G L S + C C S T +P D+SL+
Sbjct: 326 CIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGNVVNGES 385
Query: 264 -IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK 322
+ +L L FT+ E + K C C KQL + K+P VA FHLKRF+
Sbjct: 386 HVSGTTTLTDCLRRFTRPEHL-GSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFE 444
Query: 323 TDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMG 369
KI +V FPLELD+ P+ + + S + + KY L+A+V H G
Sbjct: 445 HSAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG 504
Query: 370 SSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
+ + GHY S+IR D W + +D+ +T+ + VL + Y+LFY KQ E+
Sbjct: 505 TLES-GHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHKQFLEY 555
>gi|431907760|gb|ELK11368.1| Ubiquitin carboxyl-terminal hydrolase 22 A [Pteropus alecto]
Length = 793
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 164/350 (46%), Gaps = 42/350 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT P+++ D R C+ + C++C + +
Sbjct: 434 GLINLGNTCFMNCIVQALTHT-PILRDFFLSDRHR-CEMPSPELCLVCEMSSLFRELYSG 491
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
+ P KL+ + + Y+Q+DAHEFL LD L C D K + + +
Sbjct: 492 NPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDDAGKAANNPNHCN 551
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE------------------------ 263
I+ ++F G L S + C C S T +P D+SL+
Sbjct: 552 CIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGSCTSFWPMSPGRESSVNGESH 611
Query: 264 IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKT 323
I +L L FT+ E + K C C+ KQL ++K+P VA FH KRF+
Sbjct: 612 IPGTTTLTDCLRRFTRPEHL-GSSAKIKCGSCQSYQESTKQLTMNKLPVVACFHFKRFEH 670
Query: 324 DGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMGS 370
KI ++ FPLELD+ P+ + + S + E KY L+A+V H G+
Sbjct: 671 SAKQRRKITTYISFPLELDMTPFMASSKESRMNGQLQLPTSSGNEENKYSLFAVVNHQGT 730
Query: 371 SPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTE 420
+ GHY S+IR D W + +D+ +T+ + VL + Y+LFY KQ E
Sbjct: 731 LES-GHYTSFIRHHKDQWFKCDDAVITKASIKDVLDSEGYLLFYHKQVLE 779
>gi|74145360|dbj|BAE36137.1| unnamed protein product [Mus musculus]
Length = 525
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 113/352 (32%), Positives = 166/352 (47%), Gaps = 43/352 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT PL++ D R C+ + C++C + + +
Sbjct: 177 GLINLGNTCFMNCIVQALTHT-PLLRDFFLSDRHR-CEMQSPSSCLVCEMSSLFQEFYSG 234
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
P KL+ + + Y+Q+DAHEFL LD L C D K + + +
Sbjct: 235 HRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHCN 294
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDV---------GSLGSA----- 273
I+ ++F G L S + C C S T +P D+SL++ GS GS
Sbjct: 295 CIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGSVVNGES 354
Query: 274 -----------LESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK 322
L FT+ E + K C C KQL + K+P VA FHLKRF+
Sbjct: 355 HASGTTTLTDCLRRFTRPEHL-GSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFE 413
Query: 323 TDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMG 369
KI +V FPLELD+ P+ + + S + + KY L+A+V H G
Sbjct: 414 HSAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPLDSLNNDNKYSLFAVVNHQG 473
Query: 370 SSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
+ + GHY S+IR D W + +D+ +T+ + VL + Y+LFY KQ E+
Sbjct: 474 TLES-GHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHKQFLEY 524
>gi|426358881|ref|XP_004046718.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like, partial [Gorilla gorilla gorilla]
Length = 414
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/270 (34%), Positives = 149/270 (55%), Gaps = 15/270 (5%)
Query: 153 CVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCC 212
C++C ++ HI +L G V+ P + +++ F R +QEDAHEFL +D ++ C
Sbjct: 7 CMLCTMQAHITRALYRPGHVIQPSQA------LAAGFHRGKQEDAHEFLMFTVDAMKKAC 60
Query: 213 LDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGS 272
L K S+ ++ ++FGG S+++C +C SDT++P +D++L+I+ S+
Sbjct: 61 LPGH-KQVDHHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVKQ 119
Query: 273 ALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK-TDGSYVVKI 331
ALE K E++ + E + C C ++ K L L V LKRF G+ K+
Sbjct: 120 ALEQLVKPEEL-NGENAYHCGLCLQKAPASKTLTLHTSAKVLILVLKRFSDVTGN---KL 175
Query: 332 DKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRL 391
K+V++P LD++PY S Q + L Y LYA++ H G GHYFSY+++ W+++
Sbjct: 176 AKNVQYPECLDMQPYMS--QQNTGPLVYVLYAVLVHAGWICHNGHYFSYVKAQEGQWYKM 233
Query: 392 NDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
+D+ VT LSQ AY+LFY Q +EW
Sbjct: 234 DDAEVTASGITSALSQQAYVLFYI-QKSEW 262
>gi|426238935|ref|XP_004013392.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22 [Ovis aries]
Length = 606
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 110/352 (31%), Positives = 163/352 (46%), Gaps = 43/352 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT PL++ D R C+ + C++C + + +
Sbjct: 258 GLINLGNTCFMNCIVQALTHT-PLLRDFFLSDRHR-CEMQSPSSCLVCEMSSLFQEFYSG 315
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
P KL+ + + Y+Q+DAHEFL LD L C D K + + +
Sbjct: 316 HRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHCN 375
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE------------------------ 263
I+ ++F G L S + C C S T +P D+SL+
Sbjct: 376 CIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSESSVVNGES 435
Query: 264 -IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK 322
+ +L L FT+ E + K C C KQL + K+P VA FHLKRF+
Sbjct: 436 HVSGTTTLTDCLRRFTRPEHLGS-SAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFE 494
Query: 323 TDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMG 369
KI +V FPLELD+ P+ + + S + + KY L+A+V H G
Sbjct: 495 HSAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG 554
Query: 370 SSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
+ + GHY S+IR D W + +D+ +T+ VL + Y+LFY KQ E+
Sbjct: 555 TLES-GHYTSFIRQHKDQWFKCDDAIITKASIADVLDSEGYLLFYHKQFLEY 605
>gi|359324295|ref|XP_003640329.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
6-like [Canis lupus familiaris]
Length = 380
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/266 (36%), Positives = 144/266 (54%), Gaps = 15/266 (5%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL+N+GNTC++NA LQC T+T PL + S H C T C++C L+ H+
Sbjct: 78 VGAGLQNMGNTCYVNATLQCLTYTEPLASYMLSQQHGTTCRRQTS--CMLCTLQAHLTRV 135
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
L G+V + L + + F R++QEDAHE+L +LD ++ CL + Q
Sbjct: 136 LCHPGRV------LRPLPLLLTAFHRHKQEDAHEYLMFILDAMQQACLPQDKLSDPECPQ 189
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
++Q++FGG S++QC +C S T EP +D+SL+I D S+ ALE K E +E
Sbjct: 190 DSTLIQQLFGGYWRSQIQCLHCQGISSTLEPYLDISLDIGDAHSVSQALEQLVKPELLEG 249
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK-TDGSYVVKIDKHVEFPLELDLK 344
E + C KC E+V K L L P V L+RF G+ K+ K V++P LDL+
Sbjct: 250 -ENAYHCSKCLEKVPASKVLTLHTSPKVLILVLRRFSDLTGN---KMTKEVQYPERLDLQ 305
Query: 345 PYTSGGQNSDVELKYHLYAIVEHMGS 370
Y S + Y LYA++ +G+
Sbjct: 306 HYLS--EQRTGPFGYVLYAVLTVIGN 329
>gi|149758247|ref|XP_001488653.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22 [Equus
caballus]
Length = 480
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 114/352 (32%), Positives = 165/352 (46%), Gaps = 43/352 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT PL++ D R C+ + C++C + + +
Sbjct: 132 GLINLGNTCFMNCIVQALTHT-PLLRDFFLSDRHR-CEMQSPSSCLVCEMSSLFQEFYSG 189
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
P KL+ + + Y+Q+DAHEFL LD L C D K + +
Sbjct: 190 HRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHCS 249
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDV---------GSLGSA----- 273
I+ ++F G L S + C C S T +P D+SL++ GS GS
Sbjct: 250 CIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGSVVNGES 309
Query: 274 -----------LESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK 322
L FT+ E + K C C KQL + K+P VA FHLKRF+
Sbjct: 310 HVSGTTTLTDCLRRFTRPEHL-GSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFE 368
Query: 323 TDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMG 369
KI +V FPLELD+ P+ + + S + + KY L+A+V H G
Sbjct: 369 HSAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPMDSLNNDNKYSLFAVVNHQG 428
Query: 370 SSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
+ + GHY S+IR D W + +D+ +T+ E VL + Y+LFY KQ E+
Sbjct: 429 TLES-GHYTSFIRQHKDQWFKCDDAIITKASIEDVLDSEGYLLFYHKQFLEY 479
>gi|281353638|gb|EFB29222.1| hypothetical protein PANDA_006152 [Ailuropoda melanoleuca]
Length = 538
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 165/350 (47%), Gaps = 42/350 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT P+++ D R C+ + C++C + +
Sbjct: 191 GLINLGNTCFMNCIVQALTHT-PILRDFFLSDRHR-CEMPSPELCLVCEMSSLFRELYSG 248
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
+ P KL+ + + Y+Q+DAHEFL LD L C D K + + +
Sbjct: 249 NPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDDAGKAANNPNHCN 308
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE------------------------ 263
I+ ++F G L S + C C S T +P D+SL+
Sbjct: 309 CIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGSCTSFWPMSPGRESSVNGESH 368
Query: 264 IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKT 323
I + +L L FT+ E + K C C+ KQL ++K+P VA FH KRF+
Sbjct: 369 IPGITTLTDCLRRFTRPEHL-GSSAKIKCGSCQSYQESTKQLTMNKLPVVACFHFKRFEH 427
Query: 324 DGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMGS 370
KI ++ FPLELD+ P+ + + S + E KY L+A+V H G+
Sbjct: 428 SAKQRRKITTYISFPLELDMTPFMASSKESRMNGQLQLPTNSGNDENKYSLFAVVNHQGT 487
Query: 371 SPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTE 420
+ GHY S+IR D W + +D+ +T+ + VL + Y+LFY KQ E
Sbjct: 488 LES-GHYTSFIRHHKDQWFKCDDAVITKASIKDVLDSEGYLLFYHKQVLE 536
>gi|110625685|ref|NP_001004143.2| ubiquitin carboxyl-terminal hydrolase 22 [Mus musculus]
gi|78103329|sp|Q5DU02.2|UBP22_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 22; AltName:
Full=Deubiquitinating enzyme 22; AltName: Full=Ubiquitin
thioesterase 22; AltName:
Full=Ubiquitin-specific-processing protease 22
gi|74196250|dbj|BAE33026.1| unnamed protein product [Mus musculus]
Length = 525
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 113/352 (32%), Positives = 166/352 (47%), Gaps = 43/352 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT PL++ D R C+ + C++C + + +
Sbjct: 177 GLINLGNTCFMNCIVQALTHT-PLLRDFFLSDRHR-CEMQSPSSCLVCEMSSLFQEFYSG 234
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
P KL+ + + Y+Q+DAHEFL LD L C D K + + +
Sbjct: 235 HRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHCN 294
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDV---------GSLGSA----- 273
I+ ++F G L S + C C S T +P D+SL++ GS GS
Sbjct: 295 CIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGSVVNGES 354
Query: 274 -----------LESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK 322
L FT+ E + K C C KQL + K+P VA FHLKRF+
Sbjct: 355 HASGTTTLTDCLRRFTRPEHL-GSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFE 413
Query: 323 TDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMG 369
KI +V FPLELD+ P+ + + S + + KY L+A+V H G
Sbjct: 414 HSAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPLDSLNNDNKYSLFAVVNHQG 473
Query: 370 SSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
+ + GHY S+IR D W + +D+ +T+ + VL + Y+LFY KQ E+
Sbjct: 474 TLES-GHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHKQFLEY 524
>gi|347361005|ref|NP_001178573.1| ubiquitin carboxyl-terminal hydrolase 22 [Rattus norvegicus]
Length = 525
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 113/352 (32%), Positives = 166/352 (47%), Gaps = 43/352 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT PL++ D R C+ + C++C + + +
Sbjct: 177 GLINLGNTCFMNCIVQALTHT-PLLRDFFLSDRHR-CEMQSPSSCLVCEMSSLFQEFYSG 234
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
P KL+ + + Y+Q+DAHEFL LD L C D K + + +
Sbjct: 235 HRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHCN 294
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDV---------GSLGSA----- 273
I+ ++F G L S + C C S T +P D+SL++ GS GS
Sbjct: 295 CIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGSVVNGES 354
Query: 274 -----------LESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK 322
L FT+ E + K C C KQL + K+P VA FHLKRF+
Sbjct: 355 HASGTTTLTDCLRRFTRPEHL-GSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFE 413
Query: 323 TDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMG 369
KI +V FPLELD+ P+ + + S + + KY L+A+V H G
Sbjct: 414 HSAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPLDSLNNDNKYSLFAVVNHQG 473
Query: 370 SSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
+ + GHY S+IR D W + +D+ +T+ + VL + Y+LFY KQ E+
Sbjct: 474 TLES-GHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHKQFLEY 524
>gi|417402232|gb|JAA47969.1| Putative ubiquitin carboxyl-terminal hydrolase 3 [Desmodus
rotundus]
Length = 520
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 122/365 (33%), Positives = 170/365 (46%), Gaps = 55/365 (15%)
Query: 107 GAGLENLGNTCFINAILQ---------CFTHTLPLVQ------ALRSFDHPRPCDGATEG 151
GL NLGNTCF+NAILQ C+ LP V+ A R H R
Sbjct: 158 ATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTR--SQGDNN 215
Query: 152 FCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLE-- 209
++ R + S SP L + I F+ YQQ+DAHEF++ LLD L
Sbjct: 216 VSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE 275
Query: 210 ----------SCCLDSKT----KDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYE 255
S L + ++ + +V +FGG L +++ C CG+ S ++
Sbjct: 276 LQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFD 335
Query: 256 PLIDLSLEIED--------------VGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSV 301
P +DLSL+I V SL L SFT LE++++ E + C KC+++
Sbjct: 336 PFLDLSLDIPSQFRNKRSKNQENGPVCSLRDCLRSFTDLEELDETEL-YMCHKCRKKQKS 394
Query: 302 EKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE-LDLKPYTSGGQNSDVE-LKY 359
K+ + K+P V HLKRF K+D +VEFPL LD+K Y +NS E Y
Sbjct: 395 TKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPENCLY 454
Query: 360 HLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFY----A 415
L A+V H GS GHY +Y + W NDS VT +E+ V+ AYILFY A
Sbjct: 455 DLAAVVVHHGSGVGSGHYTAYAKHE-GRWFHFNDSTVTLADEDTVVKAKAYILFYVERQA 513
Query: 416 KQGTE 420
K G++
Sbjct: 514 KAGSD 518
>gi|229597175|gb|AAI37613.1| Usp27x protein [Mus musculus]
Length = 733
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 164/350 (46%), Gaps = 42/350 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT P+++ D R C+ + C++C + +
Sbjct: 374 GLINLGNTCFMNCIVQALTHT-PILRDFFLSDRHR-CEMPSPELCLVCEMSSLFRELYSG 431
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
+ P KL+ + + Y+Q+DAHEFL LD L C D K S + +
Sbjct: 432 NPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDDVGKVASNPNHCN 491
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE------------------------ 263
I+ ++F G L S + C C S T +P D+SL+
Sbjct: 492 CIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGSCTSFWPMSPGRESSLNGESH 551
Query: 264 IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKT 323
I + +L L FT+ E + K C C+ KQL + K+P VA FH KRF+
Sbjct: 552 IPGITTLTDCLRRFTRPEHL-GSSAKIKCGSCQSYQESTKQLTMKKLPVVACFHFKRFEH 610
Query: 324 DGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMGS 370
KI ++ FPLELD+ P+ + + + V E KY L+A+V H G+
Sbjct: 611 SAKQRRKITTYISFPLELDMTPFMASSKETRVNGQLQLPTNSANNENKYSLFAVVNHQGT 670
Query: 371 SPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTE 420
+ GHY S+IR D W + +D+ +T+ + VL + Y+LFY KQ E
Sbjct: 671 LES-GHYTSFIRHHRDQWFKCDDAVITKASIKDVLDSEGYLLFYHKQVLE 719
>gi|380784219|gb|AFE63985.1| ubiquitin carboxyl-terminal hydrolase 22 [Macaca mulatta]
gi|380784221|gb|AFE63986.1| ubiquitin carboxyl-terminal hydrolase 22 [Macaca mulatta]
gi|383416981|gb|AFH31704.1| ubiquitin carboxyl-terminal hydrolase 22 [Macaca mulatta]
gi|383416983|gb|AFH31705.1| ubiquitin carboxyl-terminal hydrolase 22 [Macaca mulatta]
gi|384939714|gb|AFI33462.1| ubiquitin carboxyl-terminal hydrolase 22 [Macaca mulatta]
gi|384939716|gb|AFI33463.1| ubiquitin carboxyl-terminal hydrolase 22 [Macaca mulatta]
Length = 525
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 110/352 (31%), Positives = 164/352 (46%), Gaps = 43/352 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT PL++ D R C+ + C++C + + +
Sbjct: 177 GLINLGNTCFMNCIVQALTHT-PLLRDFFLSDRHR-CEMQSPSSCLVCEMSSLFQEFYSG 234
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
P KL+ + + Y+Q+DAHEFL LD L C D K + + +
Sbjct: 235 HRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHCN 294
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE------------------------ 263
I+ ++F G L S + C C S T +P D+SL+
Sbjct: 295 CIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGNVVNGES 354
Query: 264 -IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK 322
+ +L L FT+ E + K C C KQL + K+P VA FHLKRF+
Sbjct: 355 HVSGTTTLTDCLRRFTRPEHL-GSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFE 413
Query: 323 TDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMG 369
KI +V FPLELD+ P+ + + S + + KY L+A+V H G
Sbjct: 414 HSAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG 473
Query: 370 SSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
+ + GHY S+IR D W + +D+ +T+ + VL + Y+LFY KQ E+
Sbjct: 474 TLES-GHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHKQFLEY 524
>gi|426349090|ref|XP_004042152.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22 [Gorilla
gorilla gorilla]
Length = 525
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 110/352 (31%), Positives = 164/352 (46%), Gaps = 43/352 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT PL++ D R C+ + C++C + + +
Sbjct: 177 GLINLGNTCFMNCIVQALTHT-PLLRDFFLSDRHR-CEMQSPSSCLVCEMSSLFQEFYSG 234
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
P KL+ + + Y+Q+DAHEFL LD L C D K + + +
Sbjct: 235 HRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHCN 294
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE------------------------ 263
I+ ++F G L S + C C S T +P D+SL+
Sbjct: 295 CIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGNVVNGES 354
Query: 264 -IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK 322
+ +L L FT+ E + K C C KQL + K+P VA FHLKRF+
Sbjct: 355 HVSGTTTLTDCLRRFTRPEHL-GSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFE 413
Query: 323 TDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMG 369
KI +V FPLELD+ P+ + + S + + KY L+A+V H G
Sbjct: 414 HSAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG 473
Query: 370 SSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
+ + GHY S+IR D W + +D+ +T+ + VL + Y+LFY KQ E+
Sbjct: 474 TLES-GHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHKQFLEY 524
>gi|326929002|ref|XP_003210661.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A-like
[Meleagris gallopavo]
Length = 758
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 111/352 (31%), Positives = 166/352 (47%), Gaps = 43/352 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT PL++ D + C+ + C++C + + +
Sbjct: 410 GLINLGNTCFMNCIVQALTHT-PLLRDFFLSDRHK-CEMQSPSSCLVCEMSTLFQEFYSG 467
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
P +L+ + + Y+Q+DAHEFL LD L C D K + + +
Sbjct: 468 HRSPHIPYRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHCN 527
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDV---------GSLGSA----- 273
I+ ++F G L S + C C S T +P D+SL++ GS GS
Sbjct: 528 CIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSDGSVVNGES 587
Query: 274 -----------LESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK 322
L FT+ E + K C C KQL + K+P VA FHLKRF+
Sbjct: 588 HVSGTTTLTDCLRRFTRPEHLGS-SAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFE 646
Query: 323 TDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMG 369
KI +V FPLELD+ P+ + + S + + KY L+A+V H G
Sbjct: 647 HSAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG 706
Query: 370 SSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
+ + GHY S+IR D W + +D+ +T+ + VL + Y+LFY KQ E+
Sbjct: 707 TLES-GHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHKQFLEY 757
>gi|297742807|emb|CBI35523.3| unnamed protein product [Vitis vinifera]
Length = 723
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 102/295 (34%), Positives = 155/295 (52%), Gaps = 17/295 (5%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCD-------GATEGFCVICALRDH 161
GL N GN+C+ NA+LQC T T PL L H + C E +C IC
Sbjct: 358 GLMNCGNSCYANAVLQCLTFTRPLASYLLQGLHSKACKFLFMTPLCPKEDWCFICEFECL 417
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES 221
I L LSP ++ + I S ++EDAHEFL+ +D ++S CL
Sbjct: 418 I-LEAREGKSPLSPMGILSQIQRIGSHLGHGREEDAHEFLRYAVDTMQSVCLKDTGVVGP 476
Query: 222 LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE-DVGSLGSALESFTKL 280
L ++ +V FGG L+SK++C C S+ E ++DL++EI+ D+G+L AL FT
Sbjct: 477 L-AEDTTLVGLTFGGYLLSKIKCMKCRGKSERCERMMDLTVEIDGDIGTLEEALAQFTAT 535
Query: 281 EKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE 340
E I D E K+ C +C+ +K+LM+ + P++ LKRF++ S K++K V FP
Sbjct: 536 E-ILDGENKYQCGRCRSYEKAKKKLMVLEAPNILTIVLKRFQS--SNFGKLNKSVRFPET 592
Query: 341 LDLKPYTSGGQNSDVELKYHLYAIVEHMG--SSPTCGHYFSYIRSSPDTWHRLND 393
L++ PY SG D Y LYA+V H+ ++ GHY ++++ W R++D
Sbjct: 593 LNMTPYMSG--TDDRYPVYSLYAVVVHLDIMNAAFSGHYVCFVKNFLGDWFRIDD 645
>gi|150010639|ref|NP_056091.1| ubiquitin carboxyl-terminal hydrolase 22 [Homo sapiens]
gi|78103328|sp|Q9UPT9.2|UBP22_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 22; AltName:
Full=Deubiquitinating enzyme 22; AltName: Full=Ubiquitin
thioesterase 22; AltName:
Full=Ubiquitin-specific-processing protease 22
gi|307684440|dbj|BAJ20260.1| ubiquitin specific peptidase 22 [synthetic construct]
Length = 525
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 110/352 (31%), Positives = 164/352 (46%), Gaps = 43/352 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT PL++ D R C+ + C++C + + +
Sbjct: 177 GLINLGNTCFMNCIVQALTHT-PLLRDFFLSDRHR-CEMQSPSSCLVCEMSSLFQEFYSG 234
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
P KL+ + + Y+Q+DAHEFL LD L C D K + + +
Sbjct: 235 HRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHCN 294
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE------------------------ 263
I+ ++F G L S + C C S T +P D+SL+
Sbjct: 295 CIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGNVVNGES 354
Query: 264 -IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK 322
+ +L L FT+ E + K C C KQL + K+P VA FHLKRF+
Sbjct: 355 HVSGTTTLTDCLRRFTRPEHL-GSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFE 413
Query: 323 TDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMG 369
KI +V FPLELD+ P+ + + S + + KY L+A+V H G
Sbjct: 414 HSAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG 473
Query: 370 SSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
+ + GHY S+IR D W + +D+ +T+ + VL + Y+LFY KQ E+
Sbjct: 474 TLES-GHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHKQFLEY 524
>gi|397466402|ref|XP_003804951.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22 [Pan paniscus]
Length = 513
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 110/352 (31%), Positives = 164/352 (46%), Gaps = 43/352 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT PL++ D R C+ + C++C + + +
Sbjct: 165 GLINLGNTCFMNCIVQALTHT-PLLRDFFLSDRHR-CEMQSPSSCLVCEMSSLFQEFYSG 222
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
P KL+ + + Y+Q+DAHEFL LD L C D K + + +
Sbjct: 223 HRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHCN 282
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE------------------------ 263
I+ ++F G L S + C C S T +P D+SL+
Sbjct: 283 CIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGNVVNGES 342
Query: 264 -IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK 322
+ +L L FT+ E + K C C KQL + K+P VA FHLKRF+
Sbjct: 343 HVSGTTTLTDCLRRFTRPEHL-GSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFE 401
Query: 323 TDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMG 369
KI +V FPLELD+ P+ + + S + + KY L+A+V H G
Sbjct: 402 HSAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG 461
Query: 370 SSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
+ + GHY S+IR D W + +D+ +T+ + VL + Y+LFY KQ E+
Sbjct: 462 TLES-GHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHKQFLEY 512
>gi|26326383|dbj|BAC26935.1| unnamed protein product [Mus musculus]
Length = 540
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 164/350 (46%), Gaps = 42/350 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT P+++ D R C+ + C++C + +
Sbjct: 181 GLINLGNTCFMNCIVQALTHT-PILRDFFLSDRHR-CEMPSPELCLVCEMSSLFRELYSG 238
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
+ P KL+ + + Y+Q+DAHEFL LD L C D K S + +
Sbjct: 239 NPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDDVGKVASNPNHCN 298
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE------------------------ 263
I+ ++F G L S + C C S T +P D+SL+
Sbjct: 299 CIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGSCTSFWPMSPGRESSLNGESH 358
Query: 264 IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKT 323
I + +L L FT+ E + K C C+ KQL + K+P VA FH KRF+
Sbjct: 359 IPGITTLTDCLRRFTRPEHL-GSSAKIKCGSCQSYQESTKQLTMKKLPVVACFHFKRFEH 417
Query: 324 DGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMGS 370
KI ++ FPLELD+ P+ + + + V E KY L+A+V H G+
Sbjct: 418 SAKQRRKITTYISFPLELDMTPFMASSKETRVNGQLQLPTNSANNENKYSLFAVVNHQGT 477
Query: 371 SPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTE 420
+ GHY S+IR D W + +D+ +T+ + VL + Y+LFY KQ E
Sbjct: 478 LES-GHYTSFIRHHRDQWFKCDDAVITKASIKDVLDSEGYLLFYHKQVLE 526
>gi|148701945|gb|EDL33892.1| mCG3962 [Mus musculus]
Length = 568
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 164/350 (46%), Gaps = 42/350 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT P+++ D R C+ + C++C + +
Sbjct: 209 GLINLGNTCFMNCIVQALTHT-PILRDFFLSDRHR-CEMPSPELCLVCEMSSLFRELYSG 266
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
+ P KL+ + + Y+Q+DAHEFL LD L C D K S + +
Sbjct: 267 NPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDDVGKVASNPNHCN 326
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE------------------------ 263
I+ ++F G L S + C C S T +P D+SL+
Sbjct: 327 CIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGSCTSFWPMSPGRESSLNGESH 386
Query: 264 IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKT 323
I + +L L FT+ E + K C C+ KQL + K+P VA FH KRF+
Sbjct: 387 IPGITTLTDCLRRFTRPEHLGS-SAKIKCGSCQSYQESTKQLTMKKLPVVACFHFKRFEH 445
Query: 324 DGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMGS 370
KI ++ FPLELD+ P+ + + + V E KY L+A+V H G+
Sbjct: 446 SAKQRRKITTYISFPLELDMTPFMASSKETRVNGQLQLPTNSANNENKYSLFAVVNHQGT 505
Query: 371 SPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTE 420
+ GHY S+IR D W + +D+ +T+ + VL + Y+LFY KQ E
Sbjct: 506 LES-GHYTSFIRHHRDQWFKCDDAVITKASIKDVLDSEGYLLFYHKQVLE 554
>gi|117558705|gb|AAI26899.1| USP22 protein [Homo sapiens]
Length = 513
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 110/352 (31%), Positives = 164/352 (46%), Gaps = 43/352 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT PL++ D R C+ + C++C + + +
Sbjct: 165 GLINLGNTCFMNCIVQALTHT-PLLRDFFLSDRHR-CEMQSPSSCLVCEMSSLFQEFYSG 222
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
P KL+ + + Y+Q+DAHEFL LD L C D K + + +
Sbjct: 223 HRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHCN 282
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE------------------------ 263
I+ ++F G L S + C C S T +P D+SL+
Sbjct: 283 CIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGNVVNGES 342
Query: 264 -IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK 322
+ +L L FT+ E + K C C KQL + K+P VA FHLKRF+
Sbjct: 343 HVSGTTTLTDCLRRFTRPEHL-GSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFE 401
Query: 323 TDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMG 369
KI +V FPLELD+ P+ + + S + + KY L+A+V H G
Sbjct: 402 HSAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG 461
Query: 370 SSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
+ + GHY S+IR D W + +D+ +T+ + VL + Y+LFY KQ E+
Sbjct: 462 TLES-GHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHKQFLEY 512
>gi|403275468|ref|XP_003929464.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22 [Saimiri
boliviensis boliviensis]
Length = 555
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 110/352 (31%), Positives = 164/352 (46%), Gaps = 43/352 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT PL++ D R C+ + C++C + + +
Sbjct: 207 GLINLGNTCFMNCIVQALTHT-PLLRDFFLSDRHR-CEMQSPSSCLVCEMSSLFQEFYSG 264
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
P KL+ + + Y+Q+DAHEFL LD L C D K + + +
Sbjct: 265 HRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHCN 324
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE------------------------ 263
I+ ++F G L S + C C S T +P D+SL+
Sbjct: 325 CIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGNVVNGES 384
Query: 264 -IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK 322
+ +L L FT+ E + K C C KQL + K+P VA FHLKRF+
Sbjct: 385 HVAGTTTLTDCLRRFTRPEHL-GSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFE 443
Query: 323 TDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMG 369
KI +V FPLELD+ P+ + + S + + KY L+A+V H G
Sbjct: 444 HSAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG 503
Query: 370 SSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
+ + GHY S+IR D W + +D+ +T+ + VL + Y+LFY KQ E+
Sbjct: 504 TLES-GHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHKQFLEY 554
>gi|58258753|ref|XP_566789.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|57222926|gb|AAW40970.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 576
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 100/345 (28%), Positives = 167/345 (48%), Gaps = 29/345 (8%)
Query: 97 WPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVIC 156
WP I AGL N C+ NA LQ HT P+++ + D + FC++C
Sbjct: 53 WPEAIATAKRAAGLHNPSMACYANATLQVLLHTPPVLRIALTHDEGSCSQIKKKNFCMLC 112
Query: 157 ALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL--- 213
+L+ E S S K +P + +L+ I F + +QED HEF + + D L++ L
Sbjct: 113 SLKHMAEGSHWSGRKAYAP-GIHRSLSQIKKGFSKNRQEDTHEFFRFVTDALQNTALAKL 171
Query: 214 -------------DSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDL 260
+ ++D + + V R++GG + S++ C C + SDT++ +DL
Sbjct: 172 PKCVLPYNHRKFAHTTSRDTPEKIKHTSWVYRIWGGRVRSRVVCSRCNNPSDTFDSFLDL 231
Query: 261 SLEIEDVG--SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHL 318
SL++ G S+ L FTK +++E + K+ CE+CK + + K +D+ P + HL
Sbjct: 232 SLDVNKQGKKSVLGMLAGFTKEDRLEG-DNKYHCERCKRKANATKSFKIDQAPPILTLHL 290
Query: 319 KRFKTD------GSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSP 372
KRF + + K ++ ++F LD+ PY + KY L+ + H G+
Sbjct: 291 KRFSVNYNPYSGRARAEKFNQPIKFEQTLDIAPYMVDPASPGT--KYRLFGVTCHRGTEL 348
Query: 373 TCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLS-QDAYILFYAK 416
GHY SY+R W +D V+ V+ E VL+ + AY+L Y +
Sbjct: 349 RFGHYTSYVRGPSGQWFHADDDEVSPVQLEQVLNDKTAYLLSYIR 393
>gi|402899046|ref|XP_003912516.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22 [Papio anubis]
Length = 525
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 110/352 (31%), Positives = 164/352 (46%), Gaps = 43/352 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT PL++ D R C+ + C++C + + +
Sbjct: 177 GLINLGNTCFMNCIVQALTHT-PLLRDFFLSDRHR-CEMQSPSSCLVCEMSSLFQEFYSG 234
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
P KL+ + + Y+Q+DAHEFL LD L C D K + + +
Sbjct: 235 HRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHCN 294
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEI----------------------- 264
I+ ++F G L S + C C S T +P D+SL++
Sbjct: 295 CIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGNVVNGES 354
Query: 265 --EDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK 322
+L L FT+ E + K C C KQL + K+P VA FHLKRF+
Sbjct: 355 HMSGTTTLTDCLRRFTRPEHL-GSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFE 413
Query: 323 TDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMG 369
KI +V FPLELD+ P+ + + S + + KY L+A+V H G
Sbjct: 414 HSAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG 473
Query: 370 SSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
+ + GHY S+IR D W + +D+ +T+ + VL + Y+LFY KQ E+
Sbjct: 474 TLES-GHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHKQFLEY 524
>gi|84569929|gb|AAI10500.1| USP22 protein [Homo sapiens]
Length = 512
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 110/352 (31%), Positives = 164/352 (46%), Gaps = 43/352 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT PL++ D R C+ + C++C + + +
Sbjct: 164 GLINLGNTCFMNCIVQALTHT-PLLRDFFLSDRHR-CEMQSPSSCLVCEMSSLFQEFYSG 221
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
P KL+ + + Y+Q+DAHEFL LD L C D K + + +
Sbjct: 222 HRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHCN 281
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE------------------------ 263
I+ ++F G L S + C C S T +P D+SL+
Sbjct: 282 CIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGNVVNGES 341
Query: 264 -IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK 322
+ +L L FT+ E + K C C KQL + K+P VA FHLKRF+
Sbjct: 342 HVSGTTTLTDCLRRFTRPEHL-GSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFE 400
Query: 323 TDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMG 369
KI +V FPLELD+ P+ + + S + + KY L+A+V H G
Sbjct: 401 HSAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG 460
Query: 370 SSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
+ + GHY S+IR D W + +D+ +T+ + VL + Y+LFY KQ E+
Sbjct: 461 TLES-GHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHKQFLEY 511
>gi|443688793|gb|ELT91385.1| hypothetical protein CAPTEDRAFT_151271 [Capitella teleta]
Length = 412
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 113/338 (33%), Positives = 163/338 (48%), Gaps = 36/338 (10%)
Query: 108 AGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGF--CVICALRDHIE-L 164
GL NLGNTCF+N+++QC ++T L R +H + T +I A + + +
Sbjct: 71 VGLRNLGNTCFMNSVIQCLSNTRLLRDYCRRDEHKDEVNKTTSNMKGALINAFANLMHSI 130
Query: 165 SLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTK------ 218
+ +SP + + F Y Q+DA EFL LL+ L K K
Sbjct: 131 WKGAPDTHVSPNDFKSQIARFAKRFVGYNQQDAQEFLMYLLEGLHEDVNRVKEKRKNRIY 190
Query: 219 DESLSS-------------QGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE 265
DE S Q D+ + +F G L S L C CG SDT++P DLSL I+
Sbjct: 191 DEDDSKTVSAQEMWKMYLHQNDSKIVDIFVGQLKSSLTCTGCGHVSDTFDPFWDLSLPIK 250
Query: 266 -------DVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHL 318
DV SL S E FT E++ D + K C KCK++ K + + P V HL
Sbjct: 251 KGHGYGNDV-SLESCFELFTS-EEVLDGDEKPMCSKCKKRQKCTKSFSIQRFPKVLIIHL 308
Query: 319 KRFKTDGSYVVKIDKHVEFPLE-LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHY 377
KRF D SY K+ V FPL+ L+L + + + Y+L+A+ H G +P GHY
Sbjct: 309 KRFNQDSSYRSKLSTMVNFPLQSLELNQF--AAEKNGAPAMYNLFAVSNHSG-TPFGGHY 365
Query: 378 FSYIRS-SPDTWHRLNDSRVTRVEEEFVLSQDAYILFY 414
+Y + TWH +D+RV+++ E V S +AY+LFY
Sbjct: 366 TAYTKHPETSTWHHFSDTRVSQISESQVQSSEAYVLFY 403
>gi|449455503|ref|XP_004145492.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Cucumis
sativus]
gi|449515075|ref|XP_004164575.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Cucumis
sativus]
Length = 552
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 111/358 (31%), Positives = 179/358 (50%), Gaps = 52/358 (14%)
Query: 103 PTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPR-PCDGATEG-FCVICALRD 160
P G+ GL NLGNTCF+N++LQ F HT PL + H R C G C+ C +
Sbjct: 175 PLGL-RGLNNLGNTCFMNSVLQVFLHTPPLSNYFLNDQHNRETCSKRPIGQLCLPCDIDC 233
Query: 161 HIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDE 220
+ SP + + + S+ Y+Q+DAHEF +LDR+ S+++D+
Sbjct: 234 IFSAVFSGDHMPYSPAQFLYSWWQHSANLACYEQQDAHEFFISVLDRIHERERKSRSQDK 293
Query: 221 SLSSQGD--NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEI--EDVGS------- 269
GD I R F G L S + C CG S TY+P +D+SL++ +D S
Sbjct: 294 ---ENGDCKCIAHRAFSGQLRSDVTCMTCGFTSTTYDPCVDISLDLDTQDFSSRNIAGKL 350
Query: 270 -----------LGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHL 318
L L+ FT+ EK+ + K C+ C+E+ + KQ+ + ++P V H+
Sbjct: 351 TKPADFSSKSTLSGCLDLFTRPEKL-GSDQKLFCQNCQEKRNSVKQMSIRRLPLVLCLHI 409
Query: 319 KRFKTDGSYV----VKIDKHVEFPLELDLKPYTSG---------------GQNSDVELKY 359
KRF + S++ KID++++FP LD+ PY S G D K+
Sbjct: 410 KRF--EHSFIRRTSRKIDRYLQFPFSLDMIPYLSSSIIRNRFGNRIFASEGDELDASSKF 467
Query: 360 HLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQ 417
++A+V H G+ + GHY +Y+R + W++ +D+ +T V+EE V + Y++FY ++
Sbjct: 468 EIFAVVSHSGTLES-GHYVTYLRLR-NRWYKCDDAWITEVDEEMVRNSQCYMMFYLQK 523
>gi|426395913|ref|XP_004064203.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 27, partial
[Gorilla gorilla gorilla]
Length = 549
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 165/350 (47%), Gaps = 42/350 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT P+++ D R C+ + C++C + +
Sbjct: 190 GLINLGNTCFMNCIVQALTHT-PILRDFFLSDRHR-CEMPSPELCLVCEMSSLFRELYSG 247
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
+ P KL+ + + Y+Q+DAHEFL LD L C D K + + +
Sbjct: 248 NPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDDVGKAANNPNHCN 307
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE------------------------ 263
I+ ++F G L S + C C S T +P D+SL+
Sbjct: 308 CIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGSCTSFWPMSPGRESSVNGESH 367
Query: 264 IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKT 323
I + +L L FT+ E + K C C+ KQL ++K+P VA FH KRF+
Sbjct: 368 IPGITTLTDCLRRFTRPEHL-GSSAKIKCGSCQSYQESTKQLTMNKLPVVACFHFKRFEH 426
Query: 324 DGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMGS 370
KI ++ FPLELD+ P+ + + S + E KY L+A+V H G+
Sbjct: 427 SAKQRRKITTYISFPLELDMTPFMASSKESRMNGQLQLPTNSGNNENKYSLFAVVNHQGT 486
Query: 371 SPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTE 420
+ GHY S+IR D W + +D+ +T+ + VL + Y+LFY KQ E
Sbjct: 487 LES-GHYTSFIRHHKDQWFKCDDAVITKASIKDVLDSEGYLLFYHKQVLE 535
>gi|7673618|gb|AAF66953.1|AF229643_1 ubiquitin specific protease [Mus musculus]
Length = 525
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 164/350 (46%), Gaps = 42/350 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT P+++ D R C+ + C++C + +
Sbjct: 166 GLINLGNTCFMNCIVQALTHT-PILRDFFLSDRHR-CEMPSPELCLVCEMSSLFRELYSG 223
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
+ P KL+ + + Y+Q+DAHEFL LD L C D K S + +
Sbjct: 224 NPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDDVGKVASNHNHCN 283
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE------------------------ 263
I+ ++F G L S + C C S T +P D+SL+
Sbjct: 284 CIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGSCTSFWPMSPGRESSVDGESH 343
Query: 264 IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKT 323
I + +L L FT+ E + K C C+ KQL + K+P VA FH KRF+
Sbjct: 344 IPGITTLTDCLRRFTRPEHL-GSSAKIKCGSCQSYQESTKQLTMKKLPVVACFHFKRFEH 402
Query: 324 DGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMGS 370
KI ++ FPLELD+ P+ + + + V E KY L+A+V H G+
Sbjct: 403 SAKQRRKIATYISFPLELDMTPFMASSKETRVNGQLQLPTNSANNENKYSLFAVVNHQGT 462
Query: 371 SPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTE 420
+ GHY S+IR D W + +D+ +T+ + VL + Y+LFY KQ E
Sbjct: 463 LES-GHYTSFIRHHRDQWFKCDDAVITKASIKDVLDSEGYLLFYHKQVLE 511
>gi|60360058|dbj|BAD90248.1| mKIAA1063 protein [Mus musculus]
Length = 570
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 113/352 (32%), Positives = 166/352 (47%), Gaps = 43/352 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT PL++ D R C+ + C++C + + +
Sbjct: 222 GLINLGNTCFMNCIVQALTHT-PLLRDFFLSDRHR-CEMQSPSSCLVCEMSSLFQEFYSG 279
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
P KL+ + + Y+Q+DAHEFL LD L C D K + + +
Sbjct: 280 HRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHCN 339
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDV---------GSLGSA----- 273
I+ ++F G L S + C C S T +P D+SL++ GS GS
Sbjct: 340 CIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGSVVNGES 399
Query: 274 -----------LESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK 322
L FT+ E + K C C KQL + K+P VA FHLKRF+
Sbjct: 400 HASGTTTLTDCLRRFTRPEHL-GSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFE 458
Query: 323 TDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMG 369
KI +V FPLELD+ P+ + + S + + KY L+A+V H G
Sbjct: 459 HSAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPLDSLNNDNKYSLFAVVNHQG 518
Query: 370 SSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
+ + GHY S+IR D W + +D+ +T+ + VL + Y+LFY KQ E+
Sbjct: 519 TLES-GHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHKQFLEY 569
>gi|410212034|gb|JAA03236.1| ubiquitin specific peptidase 22 [Pan troglodytes]
gi|410262710|gb|JAA19321.1| ubiquitin specific peptidase 22 [Pan troglodytes]
gi|410299182|gb|JAA28191.1| ubiquitin specific peptidase 22 [Pan troglodytes]
gi|410356232|gb|JAA44523.1| ubiquitin specific peptidase 22 [Pan troglodytes]
Length = 525
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 110/352 (31%), Positives = 164/352 (46%), Gaps = 43/352 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT PL++ D R C+ + C++C + + +
Sbjct: 177 GLINLGNTCFMNCIVQALTHT-PLLRDFFLSDRHR-CEMQSPSSCLVCEMSSLFQEFYSG 234
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
P KL+ + + Y+Q+DAHEFL LD L C D K + + +
Sbjct: 235 HRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHCN 294
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEI----------------------- 264
I+ ++F G L S + C C S T +P D+SL++
Sbjct: 295 CIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGNVVNGES 354
Query: 265 --EDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK 322
+L L FT+ E + K C C KQL + K+P VA FHLKRF+
Sbjct: 355 HMSGTTTLTDCLRRFTRPEHL-GSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFE 413
Query: 323 TDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMG 369
KI +V FPLELD+ P+ + + S + + KY L+A+V H G
Sbjct: 414 HSAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG 473
Query: 370 SSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
+ + GHY S+IR D W + +D+ +T+ + VL + Y+LFY KQ E+
Sbjct: 474 TLES-GHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHKQFLEY 524
>gi|403297603|ref|XP_003939647.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 27, partial
[Saimiri boliviensis boliviensis]
Length = 550
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 165/350 (47%), Gaps = 42/350 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT P+++ D R C+ + C++C + +
Sbjct: 191 GLINLGNTCFMNCIVQALTHT-PILRDFFLSDRHR-CEMPSPELCLVCEMSSLFRELYSG 248
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
+ P KL+ + + Y+Q+DAHEFL LD L C D K + + +
Sbjct: 249 NPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDDVGKAANNPNHCN 308
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE------------------------ 263
I+ ++F G L S + C C S T +P D+SL+
Sbjct: 309 CIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGSCTSFWPMSPGRESSVNGESH 368
Query: 264 IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKT 323
I + +L L FT+ E + K C C+ KQL ++K+P VA FH KRF+
Sbjct: 369 IPGITTLTDCLRRFTRPEHL-GSSAKIKCGSCQSYQESTKQLTMNKLPVVACFHFKRFEH 427
Query: 324 DGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMGS 370
KI ++ FPLELD+ P+ + + S + E KY L+A+V H G+
Sbjct: 428 SAKQRRKITTYISFPLELDMTPFMASSKESRMNGQLQLPTNSGNNENKYSLFAVVNHQGT 487
Query: 371 SPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTE 420
+ GHY S+IR D W + +D+ +T+ + VL + Y+LFY KQ E
Sbjct: 488 LES-GHYTSFIRHHKDQWFKCDDAVITKASIKDVLDSEGYLLFYHKQVLE 536
>gi|403335477|gb|EJY66914.1| Ubiquitin carboxyl-terminal hydrolase [Oxytricha trifallax]
Length = 783
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 106/340 (31%), Positives = 162/340 (47%), Gaps = 36/340 (10%)
Query: 104 TGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIE 163
T + G+ NLGNTCF N+++QC THT PL S +H C C +C +I
Sbjct: 97 TRITYGMPNLGNTCFFNSVMQCLTHTKPLFLYCASKEHYSKCQKRES--CFLCTYTQYI- 153
Query: 164 LSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKT--KDES 221
L + + + P+ +V L I + ++ QQEDAHEFL L+ + C + +D
Sbjct: 154 LKIQTDKRA-QPQLIVSRLKTIWNRYRVGQQEDAHEFLILFLESFINSCFQTARPPRDII 212
Query: 222 LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLG---------S 272
Q + ++FGG S++ C C S+T+E LI LSL++ G+ G S
Sbjct: 213 HKHQYKTPILKIFGGKSRSQVHCLGCNYKSNTFEDLITLSLDL-PFGARGKPPGPMTFES 271
Query: 273 ALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKID 332
L F E ++ E K+ C CK++ K+ +DK P + H KRF G K+
Sbjct: 272 CLNRFCTSEHLKG-ENKYQCSNCKKKCEATKRFSIDKTPRILIIHFKRFDAFGR---KVP 327
Query: 333 KHVEFPLELDLKPYTSGGQNSDVELK----------------YHLYAIVEHMGSSPTCGH 376
+++P LK +TS ++ + K Y L+ +V HMG GH
Sbjct: 328 TFIKYPQSFSLKEFTSQSIDAKHDPKIRQELQTNTDKNSQELYDLFGVVVHMGGGCRSGH 387
Query: 377 YFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAK 416
Y+SY ++S W+ +DS ++ E L Q AY+LFY K
Sbjct: 388 YYSYCKNSTGNWYECDDSSISTSSTEQALKQQAYVLFYQK 427
>gi|195169026|ref|XP_002025329.1| GL13296 [Drosophila persimilis]
gi|194108785|gb|EDW30828.1| GL13296 [Drosophila persimilis]
Length = 820
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 110/335 (32%), Positives = 167/335 (49%), Gaps = 38/335 (11%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL N+GNTCF+N+++QC +HT L + LR+ R AT+ ++ I+ S
Sbjct: 496 GLRNIGNTCFMNSVIQCLSHTTELTRFLRTHHGSR--SSATKDQLILFEFAKLIQEMWTS 553
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESL------ 222
S ++P L + + Y Q+DA EFL+ LD L S L+S K E+L
Sbjct: 554 SVHTVTPMDLKRAFSAKHRMYSDYNQQDAQEFLRFFLDSLHS-ALNSGIKGETLNIDDNL 612
Query: 223 -------------SSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVG- 268
+ +++V+ +F G L S L+C CG+ S T++P DLS+ +
Sbjct: 613 SDNKKADLTWEWYTRHENSLVRDLFVGQLKSTLKCTTCGNTSVTFDPFWDLSVPLPSSSR 672
Query: 269 -SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSY 327
L + L+ F + E+I D + TC KCK + K + + P HLKRF +
Sbjct: 673 CKLEACLDLFIR-EEILDGDEMPTCSKCKTRRKCTKSFTIQRFPKYLVIHLKRFSE--TR 729
Query: 328 VVKIDKHVEFPL---ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSS 384
K+ VEFP +L++ Y G NS+ + Y LYAI HMGS T G +++ +
Sbjct: 730 WSKLSNIVEFPTADRDLNMASY---GANSNSNVHYSLYAISNHMGS--TAGGHYTALCKH 784
Query: 385 PDT--WHRLNDSRVT-RVEEEFVLSQDAYILFYAK 416
P + WH ND+ V+ V E F++S AYILFY +
Sbjct: 785 PVSRKWHEFNDNIVSDSVSENFLVSSSAYILFYER 819
>gi|410051732|ref|XP_003953155.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 22 [Pan troglodytes]
Length = 513
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 110/352 (31%), Positives = 164/352 (46%), Gaps = 43/352 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT PL++ D R C+ + C++C + + +
Sbjct: 165 GLINLGNTCFMNCIVQALTHT-PLLRDFFLSDRHR-CEMQSPSSCLVCEMSSLFQEFYSG 222
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
P KL+ + + Y+Q+DAHEFL LD L C D K + + +
Sbjct: 223 HRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHCN 282
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEI----------------------- 264
I+ ++F G L S + C C S T +P D+SL++
Sbjct: 283 CIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGNVVNGES 342
Query: 265 --EDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK 322
+L L FT+ E + K C C KQL + K+P VA FHLKRF+
Sbjct: 343 HMSGTTTLTDCLRRFTRPEHL-GSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFE 401
Query: 323 TDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMG 369
KI +V FPLELD+ P+ + + S + + KY L+A+V H G
Sbjct: 402 HSAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG 461
Query: 370 SSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
+ + GHY S+IR D W + +D+ +T+ + VL + Y+LFY KQ E+
Sbjct: 462 TLES-GHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHKQFLEY 512
>gi|194867188|ref|XP_001972018.1| GG15285 [Drosophila erecta]
gi|251765095|sp|B3NC86.1|UBP36_DROER RecName: Full=Ubiquitin carboxyl-terminal hydrolase 36; AltName:
Full=Deubiquitinating enzyme 36; AltName: Full=Protein
scrawny; AltName: Full=Ubiquitin thioesterase 36;
AltName: Full=Ubiquitin-specific-processing protease 36
gi|190653801|gb|EDV51044.1| GG15285 [Drosophila erecta]
Length = 1085
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 101/318 (31%), Positives = 162/318 (50%), Gaps = 19/318 (5%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFD-HPRPCDGA-TEGFCVICALRDHIE 163
VG G+ N+GNTC++N+ LQ H L L S H C+ A + G C++CA+ +
Sbjct: 171 VGTGMINVGNTCYLNSTLQALLHIPALANWLVSEQAHLENCNVAESGGGCIVCAMAKTL- 229
Query: 164 LSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLS 223
L+ S+ + P + L I +QEDAHEFL+ L++ +E L + L
Sbjct: 230 LATQSNQSAVRPFLIYSKLKQICKHMVVGRQEDAHEFLRFLVEAMERAYLMRFRNYKEL- 288
Query: 224 SQGDNIVQ------RVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESF 277
D +V+ ++FGG L S+++C +C S T++ DL L+I +L A E
Sbjct: 289 ---DQLVKETTPLGQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIRKADTLEDAFEGH 345
Query: 278 TKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEF 337
E++ED + CE CK++VS KQ L++ P LKRF G+ K+ K + F
Sbjct: 346 FSRERLED--MGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFSMIGN---KLTKQISF 400
Query: 338 PLELDLKPYTSGGQNSDVE-LKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRV 396
+DL Y + + + L Y L ++V H+G S CGHY + + +++ +DS V
Sbjct: 401 KPRIDLSKYAARSPAAQAQPLTYRLVSMVTHLGVSQHCGHYTAIGSTDTGSYYNFDDSYV 460
Query: 397 TRVEEEFVLSQDAYILFY 414
+ + V + +AYI+FY
Sbjct: 461 RPIAMQSVCNTNAYIMFY 478
>gi|392580119|gb|EIW73246.1| hypothetical protein TREMEDRAFT_22812, partial [Tremella
mesenterica DSM 1558]
Length = 323
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 101/330 (30%), Positives = 168/330 (50%), Gaps = 21/330 (6%)
Query: 97 WPIQIKPTGV-GAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVI 155
WP ++ T AGL N C+ NA LQ HT P ++ + S + C+ +G+C++
Sbjct: 5 WPEILRGTKKRAAGLYNPSQACYANATLQVLFHTPPFLR-IASAHQSQSCE--NKGWCML 61
Query: 156 CALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDS 215
CALR + + G + P+++ ++L+ I F +++QEDAHEF + + D L++ L
Sbjct: 62 CALRTTGDEHWSRQGSYM-PKEVHNHLSQIHKGFNKHKQEDAHEFFRFVTDALQATALAG 120
Query: 216 KTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEI--EDVGSLGSA 273
+ KD + V +++GG + S++ C C + SDT++ +DLSL++ S+ S
Sbjct: 121 RPKDLPAKIKNSTWVYKLWGGQVRSRVICDRCSTPSDTFDTFLDLSLDVPPNRKPSVLSM 180
Query: 274 LESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKT------DGSY 327
L F K +K+E E K+ CE CK + +K + P V HLKRF + +
Sbjct: 181 LREFCKDDKLEG-ENKYNCENCKRKADAKKSFRISHAPPVLTLHLKRFNVRYNSFGNKAN 239
Query: 328 VVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDT 387
K +EF LD+ + S G KY L+ + H G+ GHY SY+R
Sbjct: 240 AEKYSGFIEFGEWLDIANFMSEGT------KYRLFGVTCHRGAELRFGHYTSYVRGPSGQ 293
Query: 388 WHRLNDSRVTRVEEEFVL-SQDAYILFYAK 416
W+ +D ++ V ++ VL + AY+L Y +
Sbjct: 294 WYHADDEDMSAVRQDEVLRDKQAYLLSYIR 323
>gi|355753836|gb|EHH57801.1| Ubiquitin carboxyl-terminal hydrolase 22, partial [Macaca
fascicularis]
Length = 469
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 110/352 (31%), Positives = 164/352 (46%), Gaps = 43/352 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT PL++ D R C+ + C++C + + +
Sbjct: 121 GLINLGNTCFMNCIVQALTHT-PLLRDFFLSDRHR-CEMQSPSSCLVCEMSSLFQEFYSG 178
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
P KL+ + + Y+Q+DAHEFL LD L C D K + + +
Sbjct: 179 HRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHCN 238
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE------------------------ 263
I+ ++F G L S + C C S T +P D+SL+
Sbjct: 239 CIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGNVVNGES 298
Query: 264 -IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK 322
+ +L L FT+ E + K C C KQL + K+P VA FHLKRF+
Sbjct: 299 HVSGTTTLTDCLRRFTRPEHL-GSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFE 357
Query: 323 TDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMG 369
KI +V FPLELD+ P+ + + S + + KY L+A+V H G
Sbjct: 358 HSAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG 417
Query: 370 SSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
+ + GHY S+IR D W + +D+ +T+ + VL + Y+LFY KQ E+
Sbjct: 418 TLES-GHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHKQFLEY 468
>gi|355727971|gb|AES09371.1| ubiquitin specific peptidase 27, X-linked [Mustela putorius furo]
Length = 514
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 108/350 (30%), Positives = 165/350 (47%), Gaps = 42/350 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT P+++ D R C+ + C++C + +
Sbjct: 156 GLINLGNTCFMNCIVQALTHT-PILRDFFLSDRHR-CEMPSPELCLVCEMSSLFRELYSG 213
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
+ P KL+ + + Y+Q+DAHEFL LD L C D K + + +
Sbjct: 214 NPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDDAGKAANNPNHCN 273
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIED--------------------- 266
I+ ++F G L S + C C S T +P D+SL++
Sbjct: 274 CIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGSCTSFWPMSPGRESSVNGESH 333
Query: 267 ---VGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKT 323
+ +L L FT+ E + K C C+ KQL ++K+P VA FH KRF+
Sbjct: 334 LPGITTLTDCLRRFTRPEHL-GSSAKIKCGSCQSYQESTKQLTMNKLPVVACFHFKRFEH 392
Query: 324 DGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMGS 370
KI ++ FPLELD+ P+ + + S + E KY L+A+V H G+
Sbjct: 393 SAKQRRKITTYISFPLELDMTPFMASSKESRMNGQLQLPTNSANDENKYSLFAVVNHQGT 452
Query: 371 SPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTE 420
+ GHY S+IR D W + +D+ +T+ + VL + Y+LFY KQ E
Sbjct: 453 LES-GHYTSFIRHHKDQWFKCDDAVITKASIKDVLDSEGYLLFYHKQVLE 501
>gi|355568328|gb|EHH24609.1| Ubiquitin carboxyl-terminal hydrolase 22, partial [Macaca mulatta]
Length = 469
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 110/352 (31%), Positives = 164/352 (46%), Gaps = 43/352 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT PL++ D R C+ + C++C + + +
Sbjct: 121 GLINLGNTCFMNCIVQALTHT-PLLRDFFLSDRHR-CEMQSPSSCLVCEMSSLFQEFYSG 178
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
P KL+ + + Y+Q+DAHEFL LD L C D K + + +
Sbjct: 179 HRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHCN 238
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE------------------------ 263
I+ ++F G L S + C C S T +P D+SL+
Sbjct: 239 CIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGNVVNGES 298
Query: 264 -IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK 322
+ +L L FT+ E + K C C KQL + K+P VA FHLKRF+
Sbjct: 299 HVSGTTTLTDCLRRFTRPEHL-GSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFE 357
Query: 323 TDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMG 369
KI +V FPLELD+ P+ + + S + + KY L+A+V H G
Sbjct: 358 HSAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQSQQPTDSLNNDNKYSLFAVVNHQG 417
Query: 370 SSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
+ + GHY S+IR D W + +D+ +T+ + VL + Y+LFY KQ E+
Sbjct: 418 TLES-GHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHKQFLEY 468
>gi|417402329|gb|JAA48015.1| Putative ubiquitin carboxyl-terminal hydrolase 22 [Desmodus
rotundus]
Length = 525
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 113/352 (32%), Positives = 165/352 (46%), Gaps = 43/352 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT PL++ D R C+ + C++C + + +
Sbjct: 177 GLINLGNTCFMNCIVQALTHT-PLLRDFFLSDRHR-CEMQSPSSCLVCEMSSLFQEFYSG 234
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
P KL+ + + Y+Q+DAHEFL LD L C D K + + +
Sbjct: 235 HRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHCN 294
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDV---------GSLGSA----- 273
I+ ++F G L S + C C S T +P D+SL++ GS GS
Sbjct: 295 CIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGSVVNGDS 354
Query: 274 -----------LESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK 322
L FT+ E + K C C KQL + K+P VA FHLKRF+
Sbjct: 355 HMSGTTTLTDCLRRFTRPEHL-GSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFE 413
Query: 323 TDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMG 369
KI +V FPL LD+ P+ + + S + + KY L+A+V H G
Sbjct: 414 HSAKLRRKITTYVSFPLVLDMTPFMASSKESRMNGQYQQPADSLSNDNKYSLFAVVNHQG 473
Query: 370 SSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
+ + GHY S+IR D W + +D+ +T+ E VL + Y+LFY KQ E+
Sbjct: 474 TLES-GHYTSFIRQHKDQWFKCDDAIITKASIEDVLDSEGYLLFYHKQVLEY 524
>gi|334333006|ref|XP_001370855.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A-like
[Monodelphis domestica]
Length = 880
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 111/352 (31%), Positives = 166/352 (47%), Gaps = 43/352 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT PL++ D + C+ + C++C + + +
Sbjct: 532 GLINLGNTCFMNCIVQALTHT-PLLRDFFLSDRHK-CEMQSPSSCLVCEMSTLFQEFYSG 589
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
P +L+ + + Y+Q+DAHEFL LD L C D K + + +
Sbjct: 590 HRSPHIPYRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHCN 649
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDV---------GSLGSA----- 273
I+ ++F G L S + C C S T +P D+SL++ GS GS
Sbjct: 650 CIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSDGSVVNGES 709
Query: 274 -----------LESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK 322
L FT+ E + K C C KQL + K+P VA FHLKRF+
Sbjct: 710 HVSGTTTLTDCLRRFTRPEHLGS-SAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFE 768
Query: 323 TDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMG 369
KI +V FPLELD+ P+ + + S + + KY L+A+V H G
Sbjct: 769 HSAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG 828
Query: 370 SSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
+ + GHY S+IR D W + +D+ +T+ + VL + Y+LFY KQ E+
Sbjct: 829 TLES-GHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHKQFLEY 879
>gi|294866356|ref|XP_002764675.1| hypothetical protein Pmar_PMAR029116 [Perkinsus marinus ATCC 50983]
gi|239864365|gb|EEQ97392.1| hypothetical protein Pmar_PMAR029116 [Perkinsus marinus ATCC 50983]
Length = 1289
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 102/330 (30%), Positives = 163/330 (49%), Gaps = 24/330 (7%)
Query: 107 GAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEG-FCVICALRDHIELS 165
GAGL N GNTC++N+ LQC ++ QA + H R C G +C +C L + +
Sbjct: 90 GAGLRNQGNTCYLNSTLQCLSYVSTFAQASEAKIHERTCPRKRAGVWCGLCNLSNLVCRI 149
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
S G LSP +++ +LN + F+ +QEDAH+ L+ L+D C+ S+ +S
Sbjct: 150 HQSHGGHLSPTEVLRHLNLYFARFRPGRQEDAHDALRQLID----TCIRSEALPAKISPS 205
Query: 226 GDN--------------IVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLG 271
N ++ ++FG ++QC NCG S T+ +D+SL I ++
Sbjct: 206 AQNKKAPFVHPSVSQTTMLGQMFGYHTAQRIQCANCGHVSCTFHFDMDISLSISRCRTID 265
Query: 272 SALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRF--KTDGSYVV 329
L + E ++ + + C KCK V+ +K L P LKR+ G
Sbjct: 266 ECLTRYFAPEIFKE-QNAYKCAKCKRNVTAKKSTRLYDAPMNLTLSLKRYCYGRFGGRRQ 324
Query: 330 KIDKHVEFPLELDLKPYTS--GGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDT 387
K +V++ ELDL + + G V KY L ++ H G++P GHY++++R+
Sbjct: 325 KDGHYVKYEKELDLSKFIADHGASTPGVSNKYTLSGVLVHSGATPQLGHYYAFVRNPAGF 384
Query: 388 WHRLNDSRVTRVEEEFVLSQDAYILFYAKQ 417
W+ +D VT +E VLSQ AYILFY ++
Sbjct: 385 WYCCDDESVTPAKEHTVLSQQAYILFYERK 414
>gi|149028472|gb|EDL83857.1| rCG22861 [Rattus norvegicus]
Length = 489
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 111/350 (31%), Positives = 165/350 (47%), Gaps = 42/350 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT P+++ D R C+ + C++C + +
Sbjct: 130 GLINLGNTCFMNCIVQALTHT-PILRDFFLSDRHR-CEMPSPELCLVCEMSSLFRELYSG 187
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
+ P KL+ + + Y+Q+DAHEFL LD L C D K S + +
Sbjct: 188 NPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDDVGKVASNPNHCN 247
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE------------------------ 263
I+ ++F G L S + C C S T +P D+SL+
Sbjct: 248 CIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGSCTSFWPMSPGRESSLNGESH 307
Query: 264 IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKT 323
I V +L L FT+ E + K C C+ KQL + K+P VA FH KRF+
Sbjct: 308 IPGVTTLTDCLRRFTRPEHL-GSSAKIKCGSCQSYQESTKQLTMKKLPVVACFHFKRFEH 366
Query: 324 DGSYVVKIDKHVEFPLELDLKPYTSGGQ----NSDVEL---------KYHLYAIVEHMGS 370
KI ++ FPLELD+ P+ + + N ++L KY L+A+V H G+
Sbjct: 367 SAKQRRKITTYISFPLELDMTPFMASSKETRMNGQLQLPTNSGNNENKYSLFAVVNHQGT 426
Query: 371 SPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTE 420
+ GHY S+IR D W + +D+ +T+ + VL + Y+LFY KQ E
Sbjct: 427 LES-GHYTSFIRHHRDQWFKCDDAVITKASIKDVLDSEGYLLFYHKQVLE 475
>gi|195440202|ref|XP_002067931.1| GK11483 [Drosophila willistoni]
gi|194164016|gb|EDW78917.1| GK11483 [Drosophila willistoni]
Length = 718
Score = 159 bits (401), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 108/370 (29%), Positives = 163/370 (44%), Gaps = 61/370 (16%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLG TCF+N I+Q HT L S H C + C++C + + +
Sbjct: 352 GLLNLGATCFMNCIVQALVHTPLLSDYFMSDRHD--CGSKSTHKCLVCEVSRLFQEFYSG 409
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES------- 221
S LS +L+ + + Y+Q+DAHEF LD L C+ +K++ ES
Sbjct: 410 SRSPLSLHRLLHLIWNHAKHLAGYEQQDAHEFFIATLDVLHRHCVKAKSEHESKSNSSSS 469
Query: 222 ------------------------------------------LSSQGDNIVQRVFGGCLI 239
Q + I+ ++F G L
Sbjct: 470 SGGGSGGGGSGGGGSGGGSGGGSGSSGSGSNNNSSNSSSSSHCYGQCNCIIDQIFTGMLQ 529
Query: 240 SKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSA--------LESFTKLEKIEDPETKFT 291
S + C C S T++P D+SL++ + S G LE +T+ E + K
Sbjct: 530 SDVVCQACNGVSTTFDPFWDISLDLGETTSHGGVTPKTLIDCLERYTRAEHL-GSAAKIK 588
Query: 292 CEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPYTSGGQ 351
C CK KQ L +PSV +FHLKRF+ KI ++FP+E D+ P+ S
Sbjct: 589 CSTCKSYQESTKQFSLRTLPSVVSFHLKRFEHSALIDRKISSFIQFPVEFDMTPFMSEKN 648
Query: 352 NSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYI 411
NS + ++ LYA+V H+G+ T GHY +Y+R DTW + +D +T + VL + Y+
Sbjct: 649 NSYGDFRFSLYAVVNHVGTIDT-GHYTAYVRHQKDTWVKCDDHVITMASLKQVLDSEGYL 707
Query: 412 LFYAKQGTEW 421
LFY K E+
Sbjct: 708 LFYHKNVLEY 717
>gi|34365073|emb|CAE45893.1| hypothetical protein [Homo sapiens]
Length = 453
Score = 159 bits (401), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 110/352 (31%), Positives = 164/352 (46%), Gaps = 43/352 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT PL++ D R C+ + C++C + + +
Sbjct: 105 GLINLGNTCFMNCIVQALTHT-PLLRDFFLSDRHR-CEMQSPSSCLVCEMSSLFQEFYSG 162
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
P KL+ + + Y+Q+DAHEFL LD L C D K + + +
Sbjct: 163 HRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHCN 222
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE------------------------ 263
I+ ++F G L S + C C S T +P D+SL+
Sbjct: 223 CIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGNVVNGES 282
Query: 264 -IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK 322
+ +L L FT+ E + T C C KQL + K+P VA FHLKRF+
Sbjct: 283 HVSGTTTLTDCLRRFTRPEHLGSSAT-IKCSGCHSYQESTKQLTMKKLPIVACFHLKRFE 341
Query: 323 TDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMG 369
KI +V FPLELD+ P+ + + S + + KY L+A+V H G
Sbjct: 342 HSAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG 401
Query: 370 SSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
+ + GHY S+IR D W + +D+ +T+ + VL + Y+LFY KQ E+
Sbjct: 402 TLES-GHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHKQFLEY 452
>gi|444521987|gb|ELV13253.1| Ubiquitin carboxyl-terminal hydrolase 27 [Tupaia chinensis]
Length = 437
Score = 159 bits (401), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 108/350 (30%), Positives = 162/350 (46%), Gaps = 42/350 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT L S H C+ + C++C + +
Sbjct: 78 GLINLGNTCFMNCIVQALTHTPILRDFFLSDRHS--CEMPSPELCLVCEMSSLFRELYSG 135
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
+ P KL+ + + Y+Q+DAHEFL LD L C D K + + +
Sbjct: 136 NPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDDVGKAANNPNHCN 195
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE------------------------ 263
I+ ++F G L + + C C S T +P D+SL+
Sbjct: 196 CIIDQIFTGGLHTDVTCQACHGVSTTIDPCWDISLDLPGSCTSFWPMSPGRESSVNGESH 255
Query: 264 IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKT 323
I + +L L FT+ E + K C C+ KQL ++K+P VA FH KRF+
Sbjct: 256 IPGITTLTDCLRRFTRPEHL-GSSAKIKCGSCQSYQESTKQLTMNKLPVVACFHFKRFEH 314
Query: 324 DGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMGS 370
KI ++ FPLELD+ P+ + + S + E KY L+A+V H G+
Sbjct: 315 SAKQRRKITTYISFPLELDMTPFMASSKESRMNGQLQLPTSSGNDENKYSLFAVVNHQGT 374
Query: 371 SPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTE 420
+ GHY S+IR D W + +D+ +T+ + VL + Y+LFY KQ E
Sbjct: 375 LES-GHYTSFIRHHKDQWFKCDDAVITKASIKDVLDSEGYLLFYHKQVLE 423
>gi|262118284|ref|NP_001160039.1| ubiquitin carboxyl-terminal hydrolase 22 [Bos taurus]
gi|229558005|sp|P0C8Z3.1|UBP22_BOVIN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 22; AltName:
Full=Deubiquitinating enzyme 22; AltName: Full=Ubiquitin
thioesterase 22; AltName:
Full=Ubiquitin-specific-processing protease 22
gi|296476572|tpg|DAA18687.1| TPA: ubiquitin carboxyl-terminal hydrolase 22 [Bos taurus]
Length = 514
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 110/352 (31%), Positives = 163/352 (46%), Gaps = 43/352 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT PL++ D R C+ + C++C + + +
Sbjct: 166 GLINLGNTCFMNCIVQALTHT-PLLRDFFLSDRHR-CEMQSPSSCLVCEMSSLFQEFYSG 223
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
P KL+ + + Y+Q+DAHEFL LD L C D K + + +
Sbjct: 224 HRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHCN 283
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE------------------------ 263
I+ ++F G L S + C C S T +P D+SL+
Sbjct: 284 CIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSESSVVNGES 343
Query: 264 -IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK 322
+ +L L FT+ E + K C C KQL + K+P VA FHLKRF+
Sbjct: 344 HVSGTTTLTDCLRRFTRPEHL-GSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFE 402
Query: 323 TDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMG 369
KI +V FPLELD+ P+ + + S + + KY L+A+V H G
Sbjct: 403 HSAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG 462
Query: 370 SSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
+ + GHY S+IR D W + +D+ +T+ VL + Y+LFY KQ E+
Sbjct: 463 TLES-GHYTSFIRQHKDQWFKCDDAIITKASIADVLDSEGYLLFYHKQFLEY 513
>gi|147832982|emb|CAN68406.1| hypothetical protein VITISV_035043 [Vitis vinifera]
Length = 945
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 109/322 (33%), Positives = 164/322 (50%), Gaps = 43/322 (13%)
Query: 109 GLENLGNTC------FINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHI 162
GL N GN C F+ +L C T+ +C++C L H+
Sbjct: 431 GLLNCGNRCLRDYLLFVICMLGCVTN-----------------------WCLMCELEKHV 467
Query: 163 ELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESL 222
+ L SG LSP +++ ++ I+ QEDAHEFL+ L+ ++S CL+ + +
Sbjct: 468 -MMLRESGGPLSPSRILSHMRSINCQIGDGSQEDAHEFLRLLVTSMQSICLEKLGGEREV 526
Query: 223 SS--QGDNIVQRVFGGCLISK---LQCCNCGSCSDTYEPLIDLSLEIED-VGSLGSALES 276
+ Q +Q FGG L SK ++C C S+ YE ++DL+LEI V SL AL
Sbjct: 527 DARLQETTFIQHTFGGRLRSKCNQVKCLRCHLESERYENIMDLTLEIFGWVESLEDALTQ 586
Query: 277 FTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVE 336
FT E + D E + C +C V KQL + + P++ LKRF+ +G Y KI+K +
Sbjct: 587 FTTPEDL-DGENMYRCRRCTTYVRARKQLSIHEAPNILTIVLKRFQ-EGRYG-KINKCIT 643
Query: 337 FPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGS--SPTCGHYFSYIRSSPDTWHRLNDS 394
FP LD+ P+ +G DV Y LYA+V HM + + GHY +Y++ W R++D+
Sbjct: 644 FPDMLDMIPFMTG--TYDVPPLYMLYAVVVHMDTLNASFSGHYVAYVKDLQGNWFRVDDA 701
Query: 395 RVTRVEEEFVLSQDAYILFYAK 416
V V V+S+ AYILFY +
Sbjct: 702 EVQPVSTNQVMSEGAYILFYMR 723
>gi|440907885|gb|ELR57973.1| Ubiquitin carboxyl-terminal hydrolase 22, partial [Bos grunniens
mutus]
Length = 468
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 110/352 (31%), Positives = 163/352 (46%), Gaps = 43/352 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT PL++ D R C+ + C++C + + +
Sbjct: 120 GLINLGNTCFMNCIVQALTHT-PLLRDFFLSDRHR-CEMQSPSSCLVCEMSSLFQEFYSG 177
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
P KL+ + + Y+Q+DAHEFL LD L C D K + + +
Sbjct: 178 HRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHCN 237
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE------------------------ 263
I+ ++F G L S + C C S T +P D+SL+
Sbjct: 238 CIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSESSVVNGES 297
Query: 264 -IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK 322
+ +L L FT+ E + K C C KQL + K+P VA FHLKRF+
Sbjct: 298 HVSGTTTLTDCLRRFTRPEHL-GSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFE 356
Query: 323 TDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMG 369
KI +V FPLELD+ P+ + + S + + KY L+A+V H G
Sbjct: 357 HSAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG 416
Query: 370 SSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
+ + GHY S+IR D W + +D+ +T+ VL + Y+LFY KQ E+
Sbjct: 417 TLES-GHYTSFIRQHKDQWFKCDDAIITKASIADVLDSEGYLLFYHKQFLEY 467
>gi|260949473|ref|XP_002619033.1| hypothetical protein CLUG_00192 [Clavispora lusitaniae ATCC 42720]
gi|238846605|gb|EEQ36069.1| hypothetical protein CLUG_00192 [Clavispora lusitaniae ATCC 42720]
Length = 650
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 120/436 (27%), Positives = 198/436 (45%), Gaps = 65/436 (14%)
Query: 11 DETDLVFAREIVDEKTLDPSWSSPETLHDHLHPSNHPLTLTDLDKDQNND---------- 60
+ET RE+ +E DP PE + LH + L +DK+Q++D
Sbjct: 219 NETLRTLKRELKEELQEDPKGKLPENENGSLHQNEKEL----IDKEQDDDPHHSGKLTQT 274
Query: 61 DDDDYEEIYR-----DTRPISSSYGRYNWGSSLLSRPVEKHWPIQIKPTGVGAGLENLGN 115
+D +E+Y + RP S + S + SRP +GL N G
Sbjct: 275 KQEDSQELYEFLRPNEPRPQSGRIATHWSPSCVSSRP---------------SGLVNFGV 319
Query: 116 TCFINAILQCFTHTLPLVQA----LRSFDHPRPCDGATEGFCVICALRDHIELSLASSGK 171
TC++N+ +Q H +P VQ ++ H P T F + ++ + S K
Sbjct: 320 TCYMNSAIQAMMH-IPAVQQYLAEVQQGKHKLPPRSVTHTFAELAN-----KMWRSGSRK 373
Query: 172 VLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDNIVQ 231
++P++LV L I+ +QQED+HE+L L+ RL+ DS K L+ +++V
Sbjct: 374 YVNPKRLVQRLGDINCMMSEWQQEDSHEYLMSLMARLQE---DSTPKGRKLA---ESVVY 427
Query: 232 RVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGS------ALESFTKLEKIE- 284
+FGG L ++ C CG S T + DLSL + + G ++ F E I+
Sbjct: 428 DIFGGVLDQEVVCQQCGGVSTTKQEFYDLSLGLRKRRAEGGRYSIEKSIADFFSRETIKR 487
Query: 285 ---DPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLEL 341
D + + CE+C+++ K+ + + P H+KRFK +G+ K+ + V + L
Sbjct: 488 DAADAASGYHCERCQQRTVATKKSTVAEAPQTLVVHVKRFKFNGNSSAKVKQPVAYTKYL 547
Query: 342 DLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEE 401
DL PY + G E +Y L A++ H G S + GHY ++ TW +D + ++ E
Sbjct: 548 DLTPYMTSGS----ECRYQLLAVIVHEGRSMSSGHYVAHCLQPDGTWATYDDEYINQIAE 603
Query: 402 EFVLSQD-AYILFYAK 416
L+ AY L Y +
Sbjct: 604 RDALNDPAAYCLVYTR 619
>gi|195376439|ref|XP_002047004.1| GJ13192 [Drosophila virilis]
gi|251765136|sp|B4LG38.1|UBP36_DROVI RecName: Full=Ubiquitin carboxyl-terminal hydrolase 36; AltName:
Full=Deubiquitinating enzyme 36; AltName: Full=Protein
scrawny; AltName: Full=Ubiquitin thioesterase 36;
AltName: Full=Ubiquitin-specific-processing protease 36
gi|194154162|gb|EDW69346.1| GJ13192 [Drosophila virilis]
Length = 1214
Score = 158 bits (400), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 164/327 (50%), Gaps = 17/327 (5%)
Query: 97 WPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRS-FDHPRPCD---GATEGF 152
W + VGAG+ N+GNTC++N+ LQ H L L S H C+ G
Sbjct: 181 WKQSERKWQVGAGMLNVGNTCYLNSTLQALFHIPALANWLVSETSHVENCNISESCGSGG 240
Query: 153 CVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCC 212
C+ICA+ ++ + S+ + P + L I +QEDAHEFL+ L++ +E
Sbjct: 241 CIICAMAKTLQTT-QSNQSAVRPFLIYTKLRQICKHMVVGRQEDAHEFLRFLVEAMEKAY 299
Query: 213 L----DSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVG 268
L + K D+ + + ++FGG L S+++C +C S T++ DL L+I
Sbjct: 300 LMRFRNFKELDQLVKE--TTPISQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIRKAD 357
Query: 269 SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYV 328
+L A + + E++ED + CE CK++VS KQ L++ P LKRF G+
Sbjct: 358 TLEEAFDGYFSRERLED--MGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFSMMGN-- 413
Query: 329 VKIDKHVEFPLELDLKPYTSGGQNSDVE-LKYHLYAIVEHMGSSPTCGHYFSYIRSSPDT 387
K+ K + F +DL + + + + L Y L ++V H+G S CGHY + + +
Sbjct: 414 -KLTKQISFKPRIDLSRFAARSPTAAAQPLSYRLVSMVTHLGVSQHCGHYTAIGLTEAGS 472
Query: 388 WHRLNDSRVTRVEEEFVLSQDAYILFY 414
++ +DS V + + V + +AYI+FY
Sbjct: 473 YYNFDDSYVKPIAMQSVCNTNAYIMFY 499
>gi|328723134|ref|XP_001946077.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like
[Acyrthosiphon pisum]
Length = 920
Score = 158 bits (400), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 101/341 (29%), Positives = 171/341 (50%), Gaps = 19/341 (5%)
Query: 93 VEKHWPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFD-HPRPCDGATEG 151
V+ W Q K VG+GL+N G C+IN+ LQ H L S + H + C T G
Sbjct: 112 VQLGW--QDKKMSVGSGLDNPGVICYINSTLQALFHIPAFTNWLMSDEQHQKTCQQKT-G 168
Query: 152 F---CVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRL 208
F C++C + + LS +G + + L+ I Y+QEDAHEFL+ L++ +
Sbjct: 169 FQKDCIVCMVCNTFTLSQKHTGSSFKASIITNRLSLICKHLSTYRQEDAHEFLRYLIESM 228
Query: 209 ESC---CLDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE 265
E C L K S+ + ++FGG + +++ C CG S T++ DL L+I
Sbjct: 229 ERCYLSVLGHAAKSLDNYSKETTPINQIFGGYIRTEVTCGKCGHISTTFQHFQDLILDIR 288
Query: 266 DVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKT-- 323
++ AL+++ + E +++ + CE+C+ QV+ +K+ +++ P+V LKR+
Sbjct: 289 HSDNVNDALDNYFEKEPLDE---SYVCERCRRQVAADKKFSIERAPNVLCIQLKRYSVGM 345
Query: 324 DGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVE---LKYHLYAIVEHMGSSPTCGHYFSY 380
G K K ++ LDL Y ++ L+YHL ++V H GSS GHY +
Sbjct: 346 GGFSGNKNSKAIQINERLDLSSYQFDHHKFKIDARPLRYHLVSMVIHYGSSLHSGHYTTL 405
Query: 381 IRSSPDTWHRLNDSRVTRVE-EEFVLSQDAYILFYAKQGTE 420
+ +++ NDS V + + + S D+YI+FY + +E
Sbjct: 406 GLTPSGSYYYFNDSNVYQTNFKNYSTSNDSYIIFYELEPSE 446
>gi|351713027|gb|EHB15946.1| Ubiquitin carboxyl-terminal hydrolase 22 [Heterocephalus glaber]
Length = 490
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 113/352 (32%), Positives = 166/352 (47%), Gaps = 43/352 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT PL++ D R C+ + C++C + + +
Sbjct: 142 GLINLGNTCFMNCIVQALTHT-PLLRDFFLSDRHR-CEMQSPSSCLVCEMSSLFQEFYSG 199
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
P KL+ + + Y+Q+DAHEFL LD L C D K + + +
Sbjct: 200 HRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDSGKKANNPNHCN 259
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDV---------GSLGS------ 272
I+ ++F G L S + C C S T +P D+SL++ GS GS
Sbjct: 260 CIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTQFWPLSPGSEGSMVNGES 319
Query: 273 ----------ALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK 322
L FT+ E + K C C KQL + K+P VA FHLKRF+
Sbjct: 320 HASGTTTLTDCLRRFTRPEHL-GSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFE 378
Query: 323 TDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMG 369
KI +V FPLELD+ P+ + + S + + KY L+A+V H G
Sbjct: 379 HSAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG 438
Query: 370 SSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
+ + GHY S+IR D W + +D+ +T+ + VL + Y+LFY KQ E+
Sbjct: 439 TLES-GHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHKQFLEY 489
>gi|332029700|gb|EGI69579.1| Ubiquitin carboxyl-terminal hydrolase 22 [Acromyrmex echinatior]
Length = 501
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 163/350 (46%), Gaps = 46/350 (13%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDH---PRPCDGATEGFCVICALRDHIELS 165
GL NLGNTCF+N I+Q HT PL++ D P+P C++C + +
Sbjct: 160 GLINLGNTCFVNCIVQALIHT-PLLRDYFLADRHHCPQP------SLCLVCEVSHLFQEF 212
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
+ + L+ KL+ + Y+Q+DAHEF LD L C + +
Sbjct: 213 YSGNKAPLTLHKLLHLIWTHVRHLAGYEQQDAHEFFIATLDVLHKHCEATTILVKDNPHH 272
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGS------------LGSA 273
I+ ++F GCL S + C C S T +P D+SL++ S L
Sbjct: 273 CKCIIDQIFTGCLQSDVVCQACNGVSTTIDPFWDISLDLTSAASTSGSNTPGPPTSLLDC 332
Query: 274 LESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK----TDGSYVV 329
LE FT+ E + K C C+ KQL + ++P VA FHLKRF+ D +
Sbjct: 333 LEKFTRAEHL-GSSAKIKCSNCETYQESTKQLTMKQLPIVAIFHLKRFEHFIIQDKIFKK 391
Query: 330 KIDKHVEFPLELDLKPYTS---GGQNSDVEL---------------KYHLYAIVEHMGSS 371
KI + FP +LD+ P+ S G N+ L +Y L+A++ H GS
Sbjct: 392 KISTFISFPEQLDMTPFMSHRRNGNNNSAMLNGLSKNGEDMSFSDNRYSLFAVINHEGSL 451
Query: 372 PTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
T GHY ++IR D W + ND +TR + + VL+ + Y+LFY KQ E+
Sbjct: 452 ET-GHYTAFIRQQRDQWFKCNDHLITRAKLKDVLTSEGYLLFYHKQILEY 500
>gi|195588034|ref|XP_002083763.1| GD13899 [Drosophila simulans]
gi|251765135|sp|B4QIS3.1|UBP36_DROSI RecName: Full=Ubiquitin carboxyl-terminal hydrolase 36; AltName:
Full=Deubiquitinating enzyme 36; AltName: Full=Protein
scrawny; AltName: Full=Ubiquitin thioesterase 36;
AltName: Full=Ubiquitin-specific-processing protease 36
gi|194195772|gb|EDX09348.1| GD13899 [Drosophila simulans]
Length = 988
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/318 (32%), Positives = 162/318 (50%), Gaps = 19/318 (5%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFD-HPRPCDGATEG-FCVICALRDHIE 163
VG G+ N+GNTC++N+ LQ H L L S H C+ A G C+ICA+ +
Sbjct: 76 VGTGMINVGNTCYLNSTLQALLHIPALANWLVSEQAHLADCNVAEPGSGCIICAMAKTL- 134
Query: 164 LSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLS 223
L+ S+ + P + L I +QEDAHEFL+ L++ +E L + L
Sbjct: 135 LATQSNQSAVRPFLIYSKLKQICKHMVVGRQEDAHEFLRFLVEAMERAYLMRFRNYKEL- 193
Query: 224 SQGDNIVQ------RVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESF 277
D +V+ ++FGG L S+++C +C S T++ DL L+I SL A E
Sbjct: 194 ---DQLVKETTPLGQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIRKADSLEDAFEGH 250
Query: 278 TKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEF 337
E++ED + CE CK++VS KQ L++ P LKRF G+ K+ K + F
Sbjct: 251 FSRERLED--MGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFSMIGN---KLTKQISF 305
Query: 338 PLELDLKPYTSGGQNSDVE-LKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRV 396
+DL Y + + + L Y L ++V H+G+S CGHY + + +++ +DS V
Sbjct: 306 KPRIDLSKYAARSPAAQAQPLTYRLVSMVTHLGASQHCGHYTAIGSTDTGSFYNFDDSYV 365
Query: 397 TRVEEEFVLSQDAYILFY 414
+ + V + +AYI+F+
Sbjct: 366 RPITMQNVCNTNAYIMFF 383
>gi|294881607|ref|XP_002769432.1| ubiquitin specific protease 66, putative [Perkinsus marinus ATCC
50983]
gi|239872841|gb|EER02150.1| ubiquitin specific protease 66, putative [Perkinsus marinus ATCC
50983]
Length = 755
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/330 (30%), Positives = 164/330 (49%), Gaps = 24/330 (7%)
Query: 107 GAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEG-FCVICALRDHIELS 165
GAGL N GNTC++N+ LQC ++ QA + H R C G +C +C L + +
Sbjct: 90 GAGLRNQGNTCYLNSTLQCLSYVSTFAQASEAKIHERTCPRKRAGVWCGLCNLSNLVCRI 149
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
S G LSP +++ +LN + F+ +QEDAH+ L+ L+D C+ S+ +S
Sbjct: 150 HQSHGGHLSPTEVLRHLNLYFARFRPGRQEDAHDALRQLID----TCIRSEALPAKVSPS 205
Query: 226 GDN--------------IVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLG 271
N ++ ++FG ++QC NCG S T+ +D+SL I ++
Sbjct: 206 AQNKKAPFVHPSVSQTTMLGQMFGYHTAQRIQCANCGHVSCTFHFDMDISLSISRCRTID 265
Query: 272 SALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRF--KTDGSYVV 329
L + E ++ + + C KCK V+ +K L P LKR+ G
Sbjct: 266 ECLTRYFAPEIFKE-QNAYKCAKCKRTVTAKKSTRLYDAPMNLTLSLKRYCYGRFGGRRQ 324
Query: 330 KIDKHVEFPLELDLKPYTSGGQNS--DVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDT 387
K +V++ ELDL + + + S V KY L ++ H G++P GHY++++R+
Sbjct: 325 KDGHYVKYEKELDLSKFIADHRASTPGVSNKYILSGVLVHSGATPQLGHYYAFVRNPAGF 384
Query: 388 WHRLNDSRVTRVEEEFVLSQDAYILFYAKQ 417
W+ +D VT +E VLSQ AYILFY ++
Sbjct: 385 WYCCDDESVTPAKEHTVLSQQAYILFYERK 414
>gi|51593607|gb|AAH80737.1| Ubiquitin specific peptidase 22 [Mus musculus]
Length = 525
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 112/352 (31%), Positives = 166/352 (47%), Gaps = 43/352 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF++ I+Q THT PL++ D R C+ + C++C + + +
Sbjct: 177 GLINLGNTCFMDCIVQALTHT-PLLRDFFLSDRHR-CEMQSPSSCLVCEMSSLFQEFYSG 234
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
P KL+ + + Y+Q+DAHEFL LD L C D K + + +
Sbjct: 235 HRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHCN 294
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDV---------GSLGSA----- 273
I+ ++F G L S + C C S T +P D+SL++ GS GS
Sbjct: 295 CIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGSVVNGES 354
Query: 274 -----------LESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK 322
L FT+ E + K C C KQL + K+P VA FHLKRF+
Sbjct: 355 HASGTTTLTDCLRRFTRPEHL-GSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFE 413
Query: 323 TDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMG 369
KI +V FPLELD+ P+ + + S + + KY L+A+V H G
Sbjct: 414 HSAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPLDSLNNDNKYSLFAVVNHQG 473
Query: 370 SSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
+ + GHY S+IR D W + +D+ +T+ + VL + Y+LFY KQ E+
Sbjct: 474 TLES-GHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHKQFLEY 524
>gi|195492054|ref|XP_002093826.1| GE21508 [Drosophila yakuba]
gi|251765138|sp|B4PIW8.1|UBP36_DROYA RecName: Full=Ubiquitin carboxyl-terminal hydrolase 36; AltName:
Full=Deubiquitinating enzyme 36; AltName: Full=Protein
scrawny; AltName: Full=Ubiquitin thioesterase 36;
AltName: Full=Ubiquitin-specific-processing protease 36
gi|194179927|gb|EDW93538.1| GE21508 [Drosophila yakuba]
Length = 1082
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 101/318 (31%), Positives = 161/318 (50%), Gaps = 19/318 (5%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFD-HPRPCDGA-TEGFCVICALRDHIE 163
VG G+ N+GNTC++N+ LQ H L L S H C+ A + G C++CA+ +
Sbjct: 171 VGTGMINVGNTCYLNSTLQALLHIPALANWLVSEQAHLENCNVAESGGGCIVCAMAKTL- 229
Query: 164 LSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLS 223
L+ S+ + P + L I +QEDAHEFL+ L++ +E L + L
Sbjct: 230 LATQSNQSAVRPFLIYSKLKQICKHMVVGRQEDAHEFLRFLVEAMERAYLMRFRNYKEL- 288
Query: 224 SQGDNIVQ------RVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESF 277
D +V+ ++FGG L S+++C +C S T++ DL L+I SL A E
Sbjct: 289 ---DQLVKETTPLGQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIRKADSLEDAFEGH 345
Query: 278 TKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEF 337
E++ED + CE CK++VS KQ L++ P LKRF G+ K+ K +
Sbjct: 346 FSRERLED--MGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFSMIGN---KLTKQISL 400
Query: 338 PLELDLKPYTSGGQNSDVE-LKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRV 396
+DL Y + + + L Y L ++V H+G S CGHY + + +++ +DS V
Sbjct: 401 KPRIDLSKYAARSPAAQAQPLTYRLVSMVTHLGVSQHCGHYTAIGSTDTGSYYNFDDSYV 460
Query: 397 TRVEEEFVLSQDAYILFY 414
+ + V + +AYI+FY
Sbjct: 461 RPIAMQSVCNTNAYIMFY 478
>gi|148230765|ref|NP_001085912.1| ubiquitin carboxyl-terminal hydrolase 22-A [Xenopus laevis]
gi|82184225|sp|Q6GNI6.1|UB22A_XENLA RecName: Full=Ubiquitin carboxyl-terminal hydrolase 22-A; AltName:
Full=Deubiquitinating enzyme 22-A; AltName:
Full=Ubiquitin thioesterase 22-A; AltName:
Full=Ubiquitin-specific-processing protease 22-A
gi|49115779|gb|AAH73524.1| MGC82781 protein [Xenopus laevis]
Length = 523
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 110/352 (31%), Positives = 166/352 (47%), Gaps = 43/352 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT PL++ D + C+ + C++C + + +
Sbjct: 175 GLINLGNTCFMNCIVQALTHT-PLLRDFFLSDRHK-CEMQSPNSCLVCEMSTLFQEFYSG 232
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
P +L+ + + Y+Q+DAHEFL LD L C D K + + +
Sbjct: 233 HRSPHIPYRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHCN 292
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEI-------------EDVG------ 268
I+ ++F G L S + C C S T +P D+SL++ D G
Sbjct: 293 CIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSDAGVVNGES 352
Query: 269 ------SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK 322
+L L FT+ E + K C C KQL + K+P VA FHLKRF+
Sbjct: 353 HVSGTTTLTDCLRRFTRPEHL-GSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFE 411
Query: 323 TDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMG 369
KI +V FPLELD+ P+ + + S + + KY L+A+V H G
Sbjct: 412 HSAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPSDSLHNDNKYSLFAVVNHQG 471
Query: 370 SSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
+ + GHY S+IR D W + +D+ +T+ + VL + Y+LFY KQ E+
Sbjct: 472 TLES-GHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHKQFLEY 522
>gi|50548343|ref|XP_501641.1| YALI0C09438p [Yarrowia lipolytica]
gi|49647508|emb|CAG81946.1| YALI0C09438p [Yarrowia lipolytica CLIB122]
Length = 526
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 128/384 (33%), Positives = 171/384 (44%), Gaps = 88/384 (22%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQ-------------ALR------SFDHPRPCDGAT 149
GL N+G TCF++ I+Q H PL++ AL+ + + CD
Sbjct: 148 GLVNMGATCFMSVIVQTLIHN-PLIRNDFLAQNHSLGLCALKRAIADGTITYSDFCDYYE 206
Query: 150 E-----------------------------GFCVICALRDHIELSLASSG-KVLSPRKLV 179
E C+ CAL D AS+ + P L+
Sbjct: 207 ELPETIQRESRDLPLSTLITWANATLSPNPNNCIACALDDCFSKFYASATVQGYGPVSLM 266
Query: 180 DNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-------------------------D 214
+ I+ Y Q+DAHEF Q L++ L L D
Sbjct: 267 ISSWNINRQLAGYSQQDAHEFWQFLVNELHGSSLVRVEEGLDEDRGASSDIPVQFKNTWD 326
Query: 215 SKTKDESLSSQGDN--IVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVG--SL 270
S ++ S S D I R FGG L S C C S TY+PL+DLSL+I G SL
Sbjct: 327 SISESGSCSDTSDCTCISHRTFGGTLQSTATCNGCSHTSHTYDPLMDLSLQIPLKGQASL 386
Query: 271 GSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVK 330
S L+ +T E++E + CE CK SV K L L K P V +F LKRF+ GS K
Sbjct: 387 SSCLDKYTAPEQME-----YFCENCKSHESVSKTLALKKPPVVLSFQLKRFQHTGSSSSK 441
Query: 331 IDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHR 390
ID HVEFPL LD+ PYT ++ L Y LYA+V H GS T GHY ++ W+
Sbjct: 442 IDTHVEFPLYLDMSPYTCSQESG---LVYELYAVVCHHGSLNT-GHYTCMVKGRDMHWYN 497
Query: 391 LNDSRVTRVEEEFVLSQDAYILFY 414
+D +TRV+ + VL+ AY+LFY
Sbjct: 498 FDDVTITRVDVQQVLAARAYLLFY 521
>gi|326933314|ref|XP_003212751.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Meleagris
gallopavo]
Length = 549
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 122/350 (34%), Positives = 163/350 (46%), Gaps = 43/350 (12%)
Query: 98 PIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLV------QALRSFDH-PRPCDGATE 150
P+ K GL NLGNTCF+N+ILQC ++T L Q LR ++ R
Sbjct: 201 PMSSKVVQGLTGLRNLGNTCFMNSILQCLSNTKELRDYCLQNQYLRDLNNNSRMRTALMS 260
Query: 151 GFCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLES 210
F + L L +S +SP + + + F Y Q+DA EFL+ LLD L S
Sbjct: 261 EFAKLIQL-----LWTSSPNDSVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHS 315
Query: 211 CC-------------LDSKTKDES-------LSSQGDNIVQRVFGGCLISKLQCCNCGSC 250
LD DE + D+ V +F G L S L C CG C
Sbjct: 316 EVNRVLVRPRANADTLDHLPDDEKSRQMWRRYQEREDSRVSDLFVGQLKSSLTCSECGYC 375
Query: 251 SDTYEPLIDLSLEIEDVG----SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLM 306
S ++P DLSL I G +L L FTK E + D + K TC +CK + K+
Sbjct: 376 STAFDPFWDLSLPIPKKGYGEVTLMDCLRLFTK-EDVLDGDEKPTCCRCKARTRCTKKFS 434
Query: 307 LDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPL-ELDLKPYTSGGQNSDVELKYHLYAIV 365
+ K P + HLKRF K+ V FPL +LDL+ + S N V Y+LYA+
Sbjct: 435 IQKFPKILVLHLKRFSEARIRASKLSTFVNFPLKDLDLREFASQSCNHAV---YNLYAVS 491
Query: 366 EHMGSSPTCGHYFSYIRSSPDT-WHRLNDSRVTRVEEEFVLSQDAYILFY 414
H G++ GHY +Y +S + WH NDSRVT + V S DAY+LFY
Sbjct: 492 NHSGTT-MGGHYTAYCKSPISSEWHSFNDSRVTPMSSSHVRSSDAYLLFY 540
>gi|413926008|gb|AFW65940.1| putative ubiquitin carboxyl-terminal hydrolase superfamily protein
[Zea mays]
Length = 489
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 101/267 (37%), Positives = 151/267 (56%), Gaps = 11/267 (4%)
Query: 155 ICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLD 214
+C L + +L SG LSP +++ NL I QEDAHEFL+ L+ +++ CLD
Sbjct: 1 MCELEQYAS-TLRESGGPLSPSRILSNLRNIGCRLGGGTQEDAHEFLRHLVMSMQAACLD 59
Query: 215 SKTKDESL--SSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIED-VGSLG 271
++ + S Q ++Q++FGG L SK++C C S+ YE ++DL+LEI V SL
Sbjct: 60 GLGGEKHVEPSLQETTLIQQMFGGRLKSKVKCLRCYHESERYENIMDLTLEIHGWVESLQ 119
Query: 272 SALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKI 331
AL FT E + D + + C C V KQL + +VP++ LKRF++ G Y KI
Sbjct: 120 DALTQFTAPEDL-DGDNMYKCGSCAAYVKARKQLSVHEVPNILTVVLKRFQS-GKYG-KI 176
Query: 332 DKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGS--SPTCGHYFSYIRSSPDTWH 389
+K V FP LD+ P+ +G + D Y LYA+V H+ + + GHY SY++ TW
Sbjct: 177 NKCVTFPDMLDMVPFVTG--SGDNPPLYFLYAVVVHVDTENASFSGHYISYVKDMQGTWL 234
Query: 390 RLNDSRVTRVEEEFVLSQDAYILFYAK 416
R++DS V V V+S+ AY+LFY +
Sbjct: 235 RIDDSEVQVVSVNQVMSEGAYMLFYMR 261
>gi|344298090|ref|XP_003420727.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Loxodonta
africana]
Length = 592
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 112/352 (31%), Positives = 166/352 (47%), Gaps = 43/352 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT PL++ D + C+ + C++C + + +
Sbjct: 244 GLINLGNTCFMNCIVQALTHT-PLLRDFFLSDRHK-CEMQSPSSCLVCEMSSLFQEFYSG 301
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
P KL+ + + Y+Q+DAHEFL LD L C D K + + +
Sbjct: 302 HRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHCN 361
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDV---------GSLGS------ 272
I+ ++F G L S + C C S T +P D+SL++ GS GS
Sbjct: 362 CIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGSMVNGES 421
Query: 273 ----------ALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK 322
L FT+ E + K C C KQL + K+P VA FHLKRF+
Sbjct: 422 HASGTTTLTDCLRRFTRPEHL-GSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFE 480
Query: 323 TDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMG 369
KI +V FPLELD+ P+ + + S + + KY L+A+V H G
Sbjct: 481 HSAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG 540
Query: 370 SSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
+ + GHY S+IR D W + +D+ +T+ + VL + Y+LFY KQ E+
Sbjct: 541 TLES-GHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHKQFLEY 591
>gi|348560267|ref|XP_003465935.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Cavia
porcellus]
Length = 525
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 112/352 (31%), Positives = 165/352 (46%), Gaps = 43/352 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT PL++ D C+ + C++C + + +
Sbjct: 177 GLINLGNTCFMNCIVQALTHT-PLLRDFFLSDRHH-CEMQSPSSCLVCEMSSLFQEFYSG 234
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
P KL+ + + Y+Q+DAHEFL LD L C D K + + +
Sbjct: 235 HRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHCN 294
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDV---------GSLGSA----- 273
I+ ++F G L S + C C S T +P D+SL++ GS GS
Sbjct: 295 CIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGSVVNGES 354
Query: 274 -----------LESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK 322
L FT+ E + K C C KQL + K+P VA FHLKRF+
Sbjct: 355 HASGTTTLTDCLRRFTRPEHL-GSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFE 413
Query: 323 TDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMG 369
KI +V FPLELD+ P+ + + S + + KY L+A+V H G
Sbjct: 414 HSAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG 473
Query: 370 SSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
+ + GHY S+IR D W + +D+ +T+ + VL + Y+LFY KQ E+
Sbjct: 474 TLES-GHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHKQFLEY 524
>gi|410895865|ref|XP_003961420.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Takifugu
rubripes]
Length = 506
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 107/351 (30%), Positives = 164/351 (46%), Gaps = 43/351 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT PL++ D + C ++ C++C + + +
Sbjct: 160 GLINLGNTCFMNCIVQALTHT-PLLRDFFLSDRHK-CQMQSDS-CLVCEMSQLFQEFYSG 216
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDN 228
P +L+ + + Y+Q+DAHEFL LD L C D K + + +
Sbjct: 217 HRSPHIPFRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKDDNGKKANNPNHCNC 276
Query: 229 IVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEI------------------------ 264
I+ ++F G L S + C C S T +P D+SL++
Sbjct: 277 IIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGGDSSALNGESH 336
Query: 265 -EDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKT 323
+L L FT+ E + K C C KQL + K+P VA FHLKRF+
Sbjct: 337 ATGATTLTDCLRRFTRPEHL-GSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEH 395
Query: 324 DGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMGS 370
KI +V FPLELD+ P+ + + S + + KY L+A+V H G+
Sbjct: 396 SAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQCQQIVDPFNNDNKYSLFAVVNHQGT 455
Query: 371 SPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
+ GHY ++IR D W + +D+ +T+ + VL + Y+LFY KQ E+
Sbjct: 456 LES-GHYTTFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHKQFLEY 505
>gi|410074817|ref|XP_003954991.1| hypothetical protein KAFR_0A04210 [Kazachstania africana CBS 2517]
gi|372461573|emb|CCF55856.1| hypothetical protein KAFR_0A04210 [Kazachstania africana CBS 2517]
Length = 440
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/326 (33%), Positives = 164/326 (50%), Gaps = 31/326 (9%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
G N+G+TCF+++ILQ H +VQ S H C C+ CAL + I S +
Sbjct: 122 GFVNMGSTCFMSSILQVLIHNPFIVQNSMSQSHYSSCKIRNPNNCISCALDEIIAESYGN 181
Query: 169 -----SGKVLSPRK--LVDNLN---YISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTK 218
+GK ++ + LN I+ F Y Q+DAHEFLQ +L+RL +
Sbjct: 182 FVKYNNGKPINQYHDGFISMLNCSWKINDNFAGYSQQDAHEFLQFILNRLH--------R 233
Query: 219 DESLSSQGDN-------IVQRVFGGCLISKLQCCNCGSCSDTY-EPLIDLSLEIEDVGSL 270
D L+S N ++ +F G L S + C C S T +P IDLSL+I+D +L
Sbjct: 234 DYKLTSTYTNNTDSCSCLIHSIFQGKLKSSIVCPECHDNSKTVTDPYIDLSLDIKDKATL 293
Query: 271 GSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK-TDGSYVV 329
L+SF K E + D + C C KQL +DK+P V LKRF+ + V
Sbjct: 294 YQCLDSFHKKETLHD--YNYHCPNCDTMQDPIKQLTIDKLPPVLVLQLKRFEHLNNGQNV 351
Query: 330 KIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWH 389
K++ +EFP L++K Y +N+ + Y L ++ H+G+ GHY + ++ + W
Sbjct: 352 KLNAFIEFPTYLNMKKYCHTEENNS-SIIYELNGVISHIGTVNE-GHYIATLKLDSNNWF 409
Query: 390 RLNDSRVTRVEEEFVLSQDAYILFYA 415
+ NDS VT + EE VL AY+LFY+
Sbjct: 410 KFNDSMVTSISEEEVLKDQAYLLFYS 435
>gi|345305249|ref|XP_001511206.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like
[Ornithorhynchus anatinus]
Length = 540
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/352 (30%), Positives = 164/352 (46%), Gaps = 43/352 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT PL++ D + C+ + C++C + + +
Sbjct: 192 GLINLGNTCFMNCIVQALTHT-PLLRDFFLSDRHK-CEMQSPSSCLVCEMSTLFQEFYSG 249
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
P +L+ + + Y+Q+DAHEFL LD L C D K + + +
Sbjct: 250 HRSPHIPYRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHCN 309
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE------------------------ 263
I+ ++F G L S + C C S T +P D+SL+
Sbjct: 310 CIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSDGSVVNGES 369
Query: 264 -IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK 322
+ +L L FT+ E + K C C KQL + K+P VA FHLKRF+
Sbjct: 370 HVSGTTTLTDCLRRFTRPEHL-GSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFE 428
Query: 323 TDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMG 369
KI +V FPLELD+ P+ + + S + + KY L+A+V H G
Sbjct: 429 HSAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG 488
Query: 370 SSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
+ + GHY S+IR D W + +D+ +T+ + VL + Y+LFY KQ E+
Sbjct: 489 TLES-GHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHKQFLEY 539
>gi|449281395|gb|EMC88475.1| Ubiquitin carboxyl-terminal hydrolase 22, partial [Columba livia]
Length = 424
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/352 (30%), Positives = 164/352 (46%), Gaps = 43/352 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT PL++ D + C+ + C++C + + +
Sbjct: 76 GLINLGNTCFMNCIVQALTHT-PLLRDFFLSDRHK-CEMQSPSSCLVCEMSTLFQEFYSG 133
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
P +L+ + + Y+Q+DAHEFL LD L C D K + + +
Sbjct: 134 HRSPHIPYRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHCN 193
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE------------------------ 263
I+ ++F G L S + C C S T +P D+SL+
Sbjct: 194 CIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSDGSVVNGES 253
Query: 264 -IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK 322
+ +L L FT+ E + K C C KQL + K+P VA FHLKRF+
Sbjct: 254 HVSGTTTLTDCLRRFTRPEHL-GSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFE 312
Query: 323 TDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMG 369
KI +V FPLELD+ P+ + + S + + KY L+A+V H G
Sbjct: 313 HSAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG 372
Query: 370 SSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
+ + GHY S+IR D W + +D+ +T+ + VL + Y+LFY KQ E+
Sbjct: 373 TLES-GHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHKQFLEY 423
>gi|238477375|sp|Q6DCJ1.2|UB22B_XENLA RecName: Full=Ubiquitin carboxyl-terminal hydrolase 22-B; AltName:
Full=Deubiquitinating enzyme 22-B; AltName:
Full=Ubiquitin thioesterase 22-B; AltName:
Full=Ubiquitin-specific-processing protease 22-B
Length = 523
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 109/352 (30%), Positives = 166/352 (47%), Gaps = 43/352 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT PL++ D + C+ + C++C + + +
Sbjct: 175 GLINLGNTCFMNCIVQALTHT-PLLRDFFLSDRHK-CEMQSPNSCLVCEMSTLFQEFYSG 232
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
P +L+ + + Y+Q+DAHEFL LD L C D K + + +
Sbjct: 233 HRSPHIPYRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHCN 292
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEI-------------EDVG------ 268
I+ ++F G L S + C C S T +P D+SL++ D G
Sbjct: 293 CIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSDAGVVNGES 352
Query: 269 ------SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK 322
+L L FT+ E + K C C KQL + K+P VA FHLKRF+
Sbjct: 353 HVSGTTTLTDCLRRFTRPEHL-GSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFE 411
Query: 323 TDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMG 369
KI +V FPLELD+ P+ + + S + + KY L+A+V H G
Sbjct: 412 HSAKLRRKITTYVSFPLELDMMPFMASSKESRMNGQYQQPSDSLHNDNKYSLFAVVNHQG 471
Query: 370 SSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
+ + GHY S+IR D W + +D+ +T+ + V+ + Y+LFY KQ E+
Sbjct: 472 TLES-GHYTSFIRQHKDQWFKCDDAIITKASIKDVIDSEGYLLFYHKQFLEY 522
>gi|449475954|ref|XP_002188777.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A-like
[Taeniopygia guttata]
Length = 476
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/352 (30%), Positives = 164/352 (46%), Gaps = 43/352 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT PL++ D + C+ + C++C + + +
Sbjct: 128 GLINLGNTCFMNCIVQALTHT-PLLRDFFLSDRHK-CEMQSPSSCLVCEMSTLFQEFYSG 185
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
P +L+ + + Y+Q+DAHEFL LD L C D K + + +
Sbjct: 186 HRSPHIPYRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHCN 245
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE------------------------ 263
I+ ++F G L S + C C S T +P D+SL+
Sbjct: 246 CIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSDGSVVNGES 305
Query: 264 -IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK 322
+ +L L FT+ E + K C C KQL + K+P VA FHLKRF+
Sbjct: 306 HVSGTTTLTDCLRRFTRPEHL-GSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFE 364
Query: 323 TDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMG 369
KI +V FPLELD+ P+ + + S + + KY L+A+V H G
Sbjct: 365 HSAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG 424
Query: 370 SSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
+ + GHY S+IR D W + +D+ +T+ + VL + Y+LFY KQ E+
Sbjct: 425 TLES-GHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHKQFLEY 475
>gi|147904969|ref|NP_001090240.1| ubiquitin carboxyl-terminal hydrolase 22-B [Xenopus laevis]
gi|50418363|gb|AAH78033.1| Usp27x protein [Xenopus laevis]
Length = 572
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 109/352 (30%), Positives = 166/352 (47%), Gaps = 43/352 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT PL++ D + C+ + C++C + + +
Sbjct: 224 GLINLGNTCFMNCIVQALTHT-PLLRDFFLSDRHK-CEMQSPNSCLVCEMSTLFQEFYSG 281
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
P +L+ + + Y+Q+DAHEFL LD L C D K + + +
Sbjct: 282 HRSPHIPYRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHCN 341
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEI-------------EDVG------ 268
I+ ++F G L S + C C S T +P D+SL++ D G
Sbjct: 342 CIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSDAGVVNGES 401
Query: 269 ------SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK 322
+L L FT+ E + K C C KQL + K+P VA FHLKRF+
Sbjct: 402 HVSGTTTLTDCLRRFTRPEHL-GSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFE 460
Query: 323 TDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMG 369
KI +V FPLELD+ P+ + + S + + KY L+A+V H G
Sbjct: 461 HSAKLRRKITTYVSFPLELDMMPFMASSKESRMNGQYQQPSDSLHNDNKYSLFAVVNHQG 520
Query: 370 SSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
+ + GHY S+IR D W + +D+ +T+ + V+ + Y+LFY KQ E+
Sbjct: 521 TLES-GHYTSFIRQHKDQWFKCDDAIITKASIKDVIDSEGYLLFYHKQFLEY 571
>gi|358333533|dbj|GAA30868.2| ubiquitin carboxyl-terminal hydrolase 36/42 [Clonorchis sinensis]
Length = 835
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/332 (31%), Positives = 161/332 (48%), Gaps = 36/332 (10%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEG-------------FCVI 155
GL N GNTC++N++LQCF T PLV + + T G FC +
Sbjct: 176 GLGNSGNTCYLNSVLQCFLATGPLVAFISTRHQNLSACTTTTGQFASVTTGVSKNRFCGL 235
Query: 156 CA----LRDHIELSLA--------SSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQC 203
C L++H S A S+G+ + P V N+ I + YQQEDAHEFL
Sbjct: 236 CGILRLLKEHNSSSQAPNGMNFGYSAGRHIIPSYFVGNVRAICPNLRPYQQEDAHEFLLG 295
Query: 204 LLDRLESCCLDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE 263
LL R+E + K ++ N+++R+FGG + S++ C +C S E +LS++
Sbjct: 296 LLSRMEDNTMAGFGKVSRAVAE-TNVIRRIFGGVVRSEVTCHSCRKVSARDEQCFNLSMD 354
Query: 264 IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKE-QVSVEKQLMLDKVPSVAAFHLKRFK 322
I + SL L ++ + E++ + + CE C++ + +V + + P + RF
Sbjct: 355 ITNGRSLQQCLFNYIRHEELCG-QNAYKCENCRQLRAAVRRSTIFQGAP-ILIIQFNRFS 412
Query: 323 TDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIR 382
+ K+D VEFP +L+P+ + N + Y LYA V H G S GHY ++ R
Sbjct: 413 RNH----KLDHRVEFPSSFNLRPFMT--DNKGPPVLYRLYATVNHEGHSCRSGHYVAFTR 466
Query: 383 SSPDTWHRLNDSRVTRVEEEFVLSQDAYILFY 414
+ TW+ NDS V E VL Q Y+LFY
Sbjct: 467 RN-GTWYSHNDSFVNSTNPEHVLRQAPYLLFY 497
>gi|118097855|ref|XP_414805.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A [Gallus
gallus]
Length = 490
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/352 (30%), Positives = 164/352 (46%), Gaps = 43/352 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT PL++ D + C+ + C++C + + +
Sbjct: 142 GLINLGNTCFMNCIVQALTHT-PLLRDFFLSDRHK-CEMQSPSSCLVCEMSTLFQEFYSG 199
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
P +L+ + + Y+Q+DAHEFL LD L C D K + + +
Sbjct: 200 HRSPHIPYRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHCN 259
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE------------------------ 263
I+ ++F G L S + C C S T +P D+SL+
Sbjct: 260 CIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSDGSVVNGES 319
Query: 264 -IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK 322
+ +L L FT+ E + K C C KQL + K+P VA FHLKRF+
Sbjct: 320 HVSGTTTLTDCLRRFTRPEHL-GSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFE 378
Query: 323 TDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMG 369
KI +V FPLELD+ P+ + + S + + KY L+A+V H G
Sbjct: 379 HSAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG 438
Query: 370 SSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
+ + GHY S+IR D W + +D+ +T+ + VL + Y+LFY KQ E+
Sbjct: 439 TLES-GHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHKQFLEY 489
>gi|195127497|ref|XP_002008205.1| GI13361 [Drosophila mojavensis]
gi|251765101|sp|B4KXJ5.1|UBP36_DROMO RecName: Full=Ubiquitin carboxyl-terminal hydrolase 36; AltName:
Full=Deubiquitinating enzyme 36; AltName: Full=Protein
scrawny; AltName: Full=Ubiquitin thioesterase 36;
AltName: Full=Ubiquitin-specific-processing protease 36
gi|193919814|gb|EDW18681.1| GI13361 [Drosophila mojavensis]
Length = 1185
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/329 (30%), Positives = 164/329 (49%), Gaps = 21/329 (6%)
Query: 97 WPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRS-FDHPRPCD---GATEGF 152
W + VGAG+ N+GNTC++N+ LQ H L L S H C+ G
Sbjct: 188 WKQSDRKWQVGAGMLNVGNTCYLNSTLQALFHIPALANWLVSETAHVENCNISESCGSGG 247
Query: 153 CVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCC 212
C+ICA+ ++ + S+ + P + L I +QEDAHEFL+ L++ +E
Sbjct: 248 CIICAMAKTLQTT-QSNQTAVRPFLIYTKLRQICKHMVVGRQEDAHEFLRFLVEAMEKAY 306
Query: 213 LDSKTKDESLSSQGDNIVQ------RVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIED 266
L + L D +V+ ++FGG L S+++C +C S T++ DL L+I
Sbjct: 307 LMRFRNYKEL----DQLVKETTPLSQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIRK 362
Query: 267 VGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGS 326
+L A + + E++ED + CE CK++VS KQ L++ P LKRF G+
Sbjct: 363 ADTLEEAFDGYFSRERLED--MGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFSMMGN 420
Query: 327 YVVKIDKHVEFPLELDLKPYTSGGQNSDVE-LKYHLYAIVEHMGSSPTCGHYFSYIRSSP 385
K+ K + F +DL + + + + L Y L ++V H+G S CGHY + +
Sbjct: 421 ---KLTKQISFKPRIDLSRFAARSPAASTQPLSYRLVSMVTHLGVSQHCGHYTAIGLTES 477
Query: 386 DTWHRLNDSRVTRVEEEFVLSQDAYILFY 414
+++ +DS V + + V + +AYI+FY
Sbjct: 478 GSYYNFDDSYVRPIAMQSVCNTNAYIMFY 506
>gi|195427887|ref|XP_002062008.1| GK17299 [Drosophila willistoni]
gi|251765137|sp|B4MLR8.1|UBP36_DROWI RecName: Full=Ubiquitin carboxyl-terminal hydrolase 36; AltName:
Full=Deubiquitinating enzyme 36; AltName: Full=Protein
scrawny; AltName: Full=Ubiquitin thioesterase 36;
AltName: Full=Ubiquitin-specific-processing protease 36
gi|194158093|gb|EDW72994.1| GK17299 [Drosophila willistoni]
Length = 1311
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 110/359 (30%), Positives = 171/359 (47%), Gaps = 51/359 (14%)
Query: 81 RYNWGSSLLSRPVEKHWPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRS-F 139
R W S E+ W I GAG+ N+GNTC++N+ LQ H L L S
Sbjct: 198 RIGWKQS------ERKWQI-------GAGMINVGNTCYLNSTLQALFHIPALANWLNSEQ 244
Query: 140 DHPRPCD-------------GATEGFCVICALRDHIELSLASSGKVLSPRKLVDNLNYIS 186
H C+ G GFC+ICA+ ++ S S+ + P + L I
Sbjct: 245 SHLENCNIGGESGGGGGGGGGNNGGFCIICAMAKTLQ-STQSNASAIRPYHIYSKLKQIC 303
Query: 187 SFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDNIVQ------RVFGGCLIS 240
+QEDAHEFL+ L++ +E L + L D +V+ ++FGG L S
Sbjct: 304 KHMVIGRQEDAHEFLRFLVEAMEKAYLMRYRNYKEL----DQLVKETTPLNQIFGGYLRS 359
Query: 241 KLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVS 300
+++C +C S T++ DL L+I +L A + + E++ED + CE CK++VS
Sbjct: 360 EVRCLSCNHVSITFQHFQDLLLDIRKSDTLDEAFDGYFSRERLED--MGYKCEGCKKKVS 417
Query: 301 VEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPY-----TSGGQNSDV 355
KQ L + P LKRF G+ K+ K + F +DL + T+ GQ +
Sbjct: 418 ATKQFSLQRAPITLCIQLKRFSMIGN---KLTKQISFKPRIDLSRFAARSPTAQGQ---L 471
Query: 356 ELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFY 414
L Y L ++V H+G S CGHY + + +++ +DS V + + V S ++YI+FY
Sbjct: 472 PLTYRLVSLVTHLGVSQHCGHYTAIGLTESGSYYNFDDSYVRPIAMQSVCSTNSYIMFY 530
>gi|327283671|ref|XP_003226564.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A-like isoform
2 [Anolis carolinensis]
Length = 510
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 111/352 (31%), Positives = 166/352 (47%), Gaps = 43/352 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT PL++ D + C+ + C++C + + +
Sbjct: 162 GLINLGNTCFMNCIVQALTHT-PLLRDFFLSDRHK-CEMQSPSSCLVCEMSTLFQEFYSG 219
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
P +L+ + + Y+Q+DAHEFL LD L C D K + + +
Sbjct: 220 HRSPHIPYRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHCN 279
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDV---------GSLGSA----- 273
I+ ++F G L S + C C S T +P D+SL++ GS GS
Sbjct: 280 CIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSDGSVVNGES 339
Query: 274 -----------LESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK 322
L FT+ E + K C C KQL + K+P VA FHLKRF+
Sbjct: 340 HVTGTTTLTDCLRRFTRPEHL-GSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFE 398
Query: 323 TDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMG 369
KI +V FPLELD+ P+ + + S + + KY L+A+V H G
Sbjct: 399 HSAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPADSLNNDNKYSLFAVVNHQG 458
Query: 370 SSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
+ + GHY S+IR D W + +D+ +T+ + VL + Y+LFY KQ E+
Sbjct: 459 TLES-GHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHKQFLEY 509
>gi|194897797|ref|XP_001978724.1| GG19743 [Drosophila erecta]
gi|190650373|gb|EDV47651.1| GG19743 [Drosophila erecta]
Length = 1414
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 108/334 (32%), Positives = 165/334 (49%), Gaps = 36/334 (10%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL N+GNTCF+N+++QC +HT L + LRS R AT+ ++ I+ S
Sbjct: 1090 GLRNIGNTCFMNSVIQCLSHTQELTRFLRSHHGSR--SSATKDQQILHEFAKLIQEMWTS 1147
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESL------ 222
+ ++P +L + + Y Q+DA EFL+ LD L S L+S K E+L
Sbjct: 1148 NVHTVTPMELKRAFSTKHRMYSDYNQQDAQEFLRFFLDSLHS-ALNSGVKGETLNIDDNL 1206
Query: 223 -------------SSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVG- 268
+ +++V+ +F G L S L+C CG+ S T++P DLS+ +
Sbjct: 1207 SDNKKADLTWEWYTRHENSLVRDLFVGQLKSTLKCTTCGNTSVTFDPFWDLSVPLPSSSR 1266
Query: 269 -SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSY 327
L + L+ F + E++ D + TC KCK + K + + P HLKRF +
Sbjct: 1267 CKLEACLDLFIR-EEVLDGDEMPTCAKCKTRRKCTKSFTIQRFPKYLVIHLKRFSE--TR 1323
Query: 328 VVKIDKHVEFPL---ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSS 384
K+ VEFP EL++ Y G NS+ + Y LYAI HMGS+ GHY + +
Sbjct: 1324 WSKLSNIVEFPTSDSELNMGSY---GANSNSNVHYSLYAISNHMGST-AGGHYVALCKHP 1379
Query: 385 -PDTWHRLNDSRVTR-VEEEFVLSQDAYILFYAK 416
WH ND+ V+ + E ++S AYILFY +
Sbjct: 1380 VSRKWHEFNDNIVSEALSENHLVSSSAYILFYER 1413
>gi|229558006|sp|A6H8I0.1|UBP22_DANRE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 22; AltName:
Full=Deubiquitinating enzyme 22; AltName: Full=Ubiquitin
thioesterase 22; AltName:
Full=Ubiquitin-specific-processing protease 22
gi|148921505|gb|AAI46619.1| Usp22 protein [Danio rerio]
Length = 506
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 109/351 (31%), Positives = 166/351 (47%), Gaps = 43/351 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT PL++ D + C+ + C++C + + +
Sbjct: 160 GLINLGNTCFMNCIVQALTHT-PLLRDFFLSDRHK-CEMQSNS-CLVCEMSQLFQEFYSG 216
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDN 228
P +L+ + + Y+Q+DAHEFL LD L C D K + + +
Sbjct: 217 HRSPHIPFRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKDDNGKKANNPNHCNC 276
Query: 229 IVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDV---------GSLGSA------ 273
I+ ++F G L S + C C S T +P D+SL++ GS GS
Sbjct: 277 IIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSDGSVVNGDSH 336
Query: 274 ----------LESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKT 323
L FT+ E + K C C KQL + ++P VA FHLKRF+
Sbjct: 337 PSGATTLTDCLRRFTRPEHL-GSSAKIKCSGCHSYQESTKQLTMKRLPIVACFHLKRFEH 395
Query: 324 DGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMGS 370
KI +V FPLELD+ P+ + + S + + KY L+A+V H G+
Sbjct: 396 SAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPVDSLNNDNKYSLFAVVNHQGT 455
Query: 371 SPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
+ GHY ++IR D W + +D+ +T+ + VL + Y+LFY KQ E+
Sbjct: 456 LES-GHYTTFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHKQFLEY 505
>gi|344249976|gb|EGW06080.1| Ubiquitin carboxyl-terminal hydrolase 27 [Cricetulus griseus]
Length = 438
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 164/350 (46%), Gaps = 42/350 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT P+++ D R C+ + C++C + +
Sbjct: 79 GLINLGNTCFMNCIVQALTHT-PILRDFFLSDRHR-CEMPSPELCLVCEMSSLFRELYSG 136
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
+ P KL+ + + Y+Q+DAHEFL LD L C D K S + +
Sbjct: 137 NPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDDVGKVASNPNHCN 196
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE------------------------ 263
I+ ++F G L S + C C S T +P D+SL+
Sbjct: 197 CIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGSCTSFWPMSPGRESSMNGESH 256
Query: 264 IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKT 323
I + +L L FT+ E + K C C+ KQL + K+P VA FH KRF+
Sbjct: 257 IPGITTLTDCLRRFTRPEHL-GSSAKIKCSSCQSYQESTKQLTMKKLPVVACFHFKRFEH 315
Query: 324 DGSYVVKIDKHVEFPLELDLKPYTSGGQ----NSDVEL---------KYHLYAIVEHMGS 370
KI ++ FPLELD+ P+ + + N ++L KY L+A V H G+
Sbjct: 316 SAKQRRKITTYISFPLELDMTPFMASSKETRMNGQLQLPTNSGNNENKYSLFAGVNHQGT 375
Query: 371 SPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTE 420
+ GHY S+IR D W + +D+ + + + VL+ + Y+LFY KQ E
Sbjct: 376 LES-GHYTSFIRHHRDQWFKCDDAVIIKASIKDVLNSEGYLLFYHKQVLE 424
>gi|327283669|ref|XP_003226563.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A-like isoform
1 [Anolis carolinensis]
Length = 525
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 111/352 (31%), Positives = 166/352 (47%), Gaps = 43/352 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT PL++ D + C+ + C++C + + +
Sbjct: 177 GLINLGNTCFMNCIVQALTHT-PLLRDFFLSDRHK-CEMQSPSSCLVCEMSTLFQEFYSG 234
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
P +L+ + + Y+Q+DAHEFL LD L C D K + + +
Sbjct: 235 HRSPHIPYRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHCN 294
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDV---------GSLGSA----- 273
I+ ++F G L S + C C S T +P D+SL++ GS GS
Sbjct: 295 CIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSDGSVVNGES 354
Query: 274 -----------LESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK 322
L FT+ E + K C C KQL + K+P VA FHLKRF+
Sbjct: 355 HVTGTTTLTDCLRRFTRPEHL-GSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFE 413
Query: 323 TDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMG 369
KI +V FPLELD+ P+ + + S + + KY L+A+V H G
Sbjct: 414 HSAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPADSLNNDNKYSLFAVVNHQG 473
Query: 370 SSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
+ + GHY S+IR D W + +D+ +T+ + VL + Y+LFY KQ E+
Sbjct: 474 TLES-GHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHKQFLEY 524
>gi|224142545|ref|XP_002324616.1| predicted protein [Populus trichocarpa]
gi|222866050|gb|EEF03181.1| predicted protein [Populus trichocarpa]
Length = 566
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 104/378 (27%), Positives = 178/378 (47%), Gaps = 68/378 (17%)
Query: 99 IQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRP-CDGATEG------ 151
++ +P G+ GL NLGNTCF+N++LQ HT PL S H R C G
Sbjct: 185 VEDRPWGL-RGLNNLGNTCFMNSVLQALLHTPPLRNYFLSDRHNRYYCQQKKSGNENGGL 243
Query: 152 -FCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLES 210
C+ C + + + SP K + + ++ Y+Q+DAHEF +LD +
Sbjct: 244 RLCLACDMDAMFSAVFSGNPVPYSPAKFLYSWWQHAANLASYEQQDAHEFFISMLDGIHE 303
Query: 211 CCLDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE----- 265
K + + + I RVF G L S + C CG S Y+P +D+SL++E
Sbjct: 304 -----KVEKDRHKTHDCCIAHRVFSGILRSDVMCTACGFTSTKYDPCVDISLDLEPYLGS 358
Query: 266 -------------------------DVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVS 300
+ +L L+ FT+ E++ + KF C++C+ +
Sbjct: 359 SAKSMSLKTHSCNGEADCTNSSQNGGISTLIGCLDRFTRPERLGS-DQKFFCQQCQVRQE 417
Query: 301 VEKQLMLDKVPSVAAFHLKRFKTDGSYVV--KIDKHVEFPLELDLKPYTSGG-------- 350
KQ+ + K+P V+ FH+KRF+ + K+D++++FP LD+ PY S
Sbjct: 418 SLKQMSIRKLPLVSCFHIKRFEHSSIRKMSRKVDRYLQFPFSLDMAPYLSSSILRSRFGN 477
Query: 351 -----------QNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRV 399
++++ ++ L+A+V H G + GHY +Y+R S + W++ +DS +T+V
Sbjct: 478 RIFPFDGDEADASNEMSSEFELFAVVTHTGKLDS-GHYVTYLRLS-NQWYKCDDSWITQV 535
Query: 400 EEEFVLSQDAYILFYAKQ 417
E V + Y++FY ++
Sbjct: 536 NENIVRAAQGYMMFYVQK 553
>gi|354504731|ref|XP_003514427.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 1
[Cricetulus griseus]
gi|354504733|ref|XP_003514428.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 2
[Cricetulus griseus]
gi|354504735|ref|XP_003514429.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 3
[Cricetulus griseus]
Length = 613
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 118/338 (34%), Positives = 160/338 (47%), Gaps = 39/338 (11%)
Query: 108 AGLENLGNTCFINAILQCFTHTLPL----VQALRSFDHPRPCDGATEGFCVICALRDHIE 163
AGL NLGNTCF+N+ILQC ++T L +Q L D + T L I
Sbjct: 275 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLGHTSNAHTALMEEFAKLIQTIW 334
Query: 164 LSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCC----------- 212
S S V+SP + + + F Y Q+DA EFL+ LLD L +
Sbjct: 335 TS--SPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTVRPKPSP 392
Query: 213 --LDSKTKDESLSSQGDNIVQR-------VFGGCLISKLQCCNCGSCSDTYEPLIDLSLE 263
LD DE ++R +F G L S L C +CG CS ++P DLSL
Sbjct: 393 ENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLP 452
Query: 264 IEDVG----SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLK 319
I G +L + FTK E + D + K TC +C+ + K+ + + P + HLK
Sbjct: 453 IAKRGYPEVTLMDCMRLFTK-EDVLDGDEKPTCYRCRARKRCIKKFSVQRFPKILVLHLK 511
Query: 320 RFKTDGSYVVKIDKHVEFPL-ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYF 378
RF K+ V FPL +LDL+ + S N V Y+LYA+ H G++ GHY
Sbjct: 512 RFSESRIRTSKLTTFVNFPLRDLDLREFASENTNHAV---YNLYAVSNHSGTT-MGGHYT 567
Query: 379 SYIRSSPDT--WHRLNDSRVTRVEEEFVLSQDAYILFY 414
+Y R SP T WH NDS VT + V + DAY+LFY
Sbjct: 568 AYCR-SPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFY 604
>gi|307107733|gb|EFN55975.1| hypothetical protein CHLNCDRAFT_145319 [Chlorella variabilis]
Length = 928
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 102/310 (32%), Positives = 159/310 (51%), Gaps = 14/310 (4%)
Query: 117 CFINAILQCFTHTLPLVQALRSFDHPRPC-DGATEGFCVICALRDHIELSLASSGK--VL 173
C+ N++LQ T PL L S +H C + +CV+C L + S VL
Sbjct: 109 CYANSLLQALLATPPLAAFLVSGEHSSGCLKPSASHWCVLCELEKLAVQAYGDSASRGVL 168
Query: 174 SPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL---DSKTKDESLSSQGDNIV 230
+PR L+ N+ + F +QED+HE L++ +E+ L K + + L S+ ++
Sbjct: 169 NPRPLLRNVKRLGKQFTFGRQEDSHELFLRLVEAVEAVQLLEAGGKARHD-LRSRETCLI 227
Query: 231 QRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIED-VGSLGSALESFTKLEKIEDPETK 289
VFGG S+++C +CG S YE L+LE+ + SL +AL SF E++ D + +
Sbjct: 228 HHVFGGYTRSQVECRSCGHISRAYECCTSLTLEVSARIASLEAALSSFAASERL-DGDNR 286
Query: 290 FTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPYTSG 349
+ C+ CK V+ +K L+ P + LKRF KI + FP +LD+ PY +
Sbjct: 287 YKCDGCKAYVAADKSTALEVAPHMLQICLKRFAP--GRFGKITSRLSFPEQLDMGPYMAA 344
Query: 350 GQNSDVELKYHLYAIVEHM--GSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQ 407
++Y LYA+V H+ G S GHY +Y+R +W + +DS VT V VL+
Sbjct: 345 SCLDGDLVQYRLYAVVVHIDWGRSTDYGHYIAYVRCG-SSWFQCDDSSVTAVSAAKVLAS 403
Query: 408 DAYILFYAKQ 417
AY+LFY +Q
Sbjct: 404 SAYLLFYERQ 413
>gi|225709338|gb|ACO10515.1| Ubiquitin carboxyl-terminal hydrolase 22 [Caligus rogercresseyi]
Length = 484
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 109/336 (32%), Positives = 159/336 (47%), Gaps = 30/336 (8%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF++ I+Q HT PL++ D R C + C++C + + +
Sbjct: 155 GLINLGNTCFMSCIIQSLIHT-PLLRDYFLSDRHR-CMFQGKNDCMVCEVSRLFQEFYSG 212
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDN 228
S L P L+ + Y+Q+DAHEF LD L + T + + D
Sbjct: 213 SKVPLVPHVLLHMTWTHAHHLAGYEQQDAHEFFIATLDLLHRHLIHKTTVNPA---NCDC 269
Query: 229 IVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEI-----------------EDVGSLG 271
IV +F G L S + C NC S T +P D+SL++ V SL
Sbjct: 270 IVDTIFTGKLQSDVVCQNCKGVSTTIDPFWDISLDLPAATPSSSNSSSSSSSSNHVISLH 329
Query: 272 SALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKI 331
+ LE FTK E + K C C+ KQL + K+P VA+FHLKRF+ + KI
Sbjct: 330 NCLERFTKPEHL-GSSAKIKCSNCQTYQESTKQLTMKKLPIVASFHLKRFEHSSRFHKKI 388
Query: 332 DKHVEFPLELDLKPYTSGGQNSDV------ELKYHLYAIVEHMGSSPTCGHYFSYIRSSP 385
+ FP LD+ P+ S +N+ Y L+A++ H G+ GHY S++R
Sbjct: 389 STRIAFPEILDMSPFVSHIRNNSASPVNSGSYTYTLFAVINHTGNIEA-GHYTSFVRQHR 447
Query: 386 DTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
D W+R ND ++ + VL + Y+LFY KQ E+
Sbjct: 448 DRWYRCNDHQIVPADLSDVLGSEGYLLFYHKQILEY 483
>gi|10720326|sp|O57429.1|UBP2_CHICK RecName: Full=Ubiquitin carboxyl-terminal hydrolase 2; AltName:
Full=41 kDa ubiquitin-specific protease; AltName:
Full=Deubiquitinating enzyme 2; AltName: Full=Ubiquitin
thioesterase 2; AltName:
Full=Ubiquitin-specific-processing protease 2
gi|2736064|gb|AAC13729.1| ubiquitin specific protease 41 [Gallus gallus]
Length = 357
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 119/339 (35%), Positives = 160/339 (47%), Gaps = 43/339 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLV------QALRSFDH-PRPCDGATEGFCVICALRDH 161
GL NLGNTCF+N+ILQC ++T L Q LR ++ R F + L
Sbjct: 20 GLRNLGNTCFMNSILQCLSNTKELRDYCLQNQYLRDLNNNSRMRTALMSEFAKLIQL--- 76
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLD-------------RL 208
L +S +SP + + + F Y Q+DA EFL+ LLD R
Sbjct: 77 --LWTSSPNDSVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHGEVNRVLVRPRA 134
Query: 209 ESCCLDSKTKDES-------LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLS 261
+ LD DE + D+ V +F G L S L C CG CS ++P DLS
Sbjct: 135 NADTLDHLPDDEKSRQMWRRYQEREDSRVSDLFVGQLKSSLTCSECGYCSTAFDPFWDLS 194
Query: 262 LEIEDVG----SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFH 317
L I G +L L FTK E + D + K TC +CK + K+ + K P + H
Sbjct: 195 LPIPKKGYGEVTLMDCLRLFTK-EDVLDGDEKPTCCRCKARTRCTKKFSIQKFPKILVLH 253
Query: 318 LKRFKTDGSYVVKIDKHVEFPL-ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGH 376
LKRF K+ V FPL +LDL+ + S N V Y+LYA+ H G++ GH
Sbjct: 254 LKRFSEARIRASKLTTFVNFPLKDLDLREFASQSCNHAV---YNLYAVSNHSGTT-MGGH 309
Query: 377 YFSYIRSSPDT-WHRLNDSRVTRVEEEFVLSQDAYILFY 414
Y +Y +S + WH NDSRVT + V S DAY+LFY
Sbjct: 310 YTAYCKSPISSEWHSFNDSRVTPMSSSHVRSSDAYLLFY 348
>gi|351706550|gb|EHB09469.1| Ubiquitin carboxyl-terminal hydrolase 27 [Heterocephalus glaber]
Length = 438
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 108/350 (30%), Positives = 164/350 (46%), Gaps = 42/350 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT P+++ D R C+ + C++C + +
Sbjct: 79 GLINLGNTCFMNCIVQALTHT-PILRDFFLSDRHR-CEMPSPELCLVCEMSSLFRELYSG 136
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
+ P KL+ + + Y+Q+DAHEFL LD L C D K + + +
Sbjct: 137 NPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDDVGKAANNPNHCN 196
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE------------------------ 263
I+ ++F G L S + C C S T +P D+SL+
Sbjct: 197 CIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGSCTSFWPMSPGRETSVNGESH 256
Query: 264 IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKT 323
I + +L L FT+ E + K C C+ KQL ++K+P VA FH KRF+
Sbjct: 257 IPGITTLTDCLRRFTRPEHL-GSSAKIKCGSCQSYQESTKQLTMNKLPVVACFHFKRFEH 315
Query: 324 DGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMGS 370
KI ++ FPLELD+ P+ + + S + E KY L+A+V H G+
Sbjct: 316 SVKQRRKITTYISFPLELDMTPFMASSKESRMNGQLQLPTSSGNNENKYSLFAVVNHQGT 375
Query: 371 SPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTE 420
+ GHY S+I D W + +D+ +T+ + VL + Y+LFY KQ E
Sbjct: 376 LES-GHYTSFICHHKDQWFKCDDAVITKASIKDVLDSEGYLLFYHKQVLE 424
>gi|449489446|ref|XP_002194208.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Taeniopygia
guttata]
Length = 625
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 117/339 (34%), Positives = 162/339 (47%), Gaps = 43/339 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLV------QALRSFDHPRPCDGATEGFCVICALRDHI 162
GL NLGNTCF+N+ILQC +++ L Q LR + + + ++ I
Sbjct: 288 GLRNLGNTCFMNSILQCLSNSKELRDYCLQNQYLRDLN-----NNSRMRTALMSEFAKLI 342
Query: 163 ELSLASS-GKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCC--------- 212
+L SS + +SP + + + F Y Q+DA EFL+ LLD L S
Sbjct: 343 QLLWTSSPNESVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHSEVNRVLVRPRA 402
Query: 213 ----LDSKTKDES-------LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLS 261
LD DE + D+ + +F G L S L C CG CS ++P DLS
Sbjct: 403 STDSLDHLPDDEKSRQMWRRYQEREDSRISDLFVGQLKSSLTCSECGYCSTAFDPFWDLS 462
Query: 262 LEIEDVG----SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFH 317
L I G +L L FTK E + D + K TC +CK + K+ + K P + H
Sbjct: 463 LPIPKKGYGEVTLMDCLRLFTK-EDVLDGDEKPTCCRCKARTRCTKKFSIQKFPKILVLH 521
Query: 318 LKRFKTDGSYVVKIDKHVEFPL-ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGH 376
LKRF K+ V FPL +LDL+ + S N V Y+LYA+ H G++ GH
Sbjct: 522 LKRFSEARIRSSKLTTFVNFPLKDLDLREFASQSCNHAV---YNLYAVSNHSGTT-MGGH 577
Query: 377 YFSYIRSSPDT-WHRLNDSRVTRVEEEFVLSQDAYILFY 414
Y +Y +S + WH NDSRVT + V S DAY+LFY
Sbjct: 578 YTAYCKSPVSSEWHSFNDSRVTPMSSSHVRSSDAYLLFY 616
>gi|359324316|ref|XP_003640339.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
6-like [Canis lupus familiaris]
Length = 375
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 97/273 (35%), Positives = 140/273 (51%), Gaps = 15/273 (5%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VGAGL+N+GNTC++NA LQC T+T PL + S H C C++C L+ H+
Sbjct: 78 VGAGLQNMGNTCYVNATLQCLTYTEPLASYVLSQKHGTACRKQIS--CMLCTLQAHMTRV 135
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
L G+VL L + + F ++QEDAHE+L +LD ++ CL +S +Q
Sbjct: 136 LCHPGRVLPTPSL------LLAAFHTHKQEDAHEYLMFILDAMQQACLPEDKPSDSQHAQ 189
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
++Q FGG S +QC +C S T EP +D+ L+I S+ ALE K E +E
Sbjct: 190 DSTLIQHSFGGYFRSHIQCLHCQGISSTLEPYLDIRLDIGTAQSVSQALEQLVKPEMLEG 249
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK-TDGSYVVKIDKHVEFPLELDLK 344
E + C KC E+V K L L V LKRF G+ K+ K +++P LD++
Sbjct: 250 -ENAYHCSKCLEKVPASKVLTLHSCAKVLILVLKRFSDFTGN---KMTKEMQYPECLDMQ 305
Query: 345 PYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHY 377
S + L Y LYA++ H G S G +
Sbjct: 306 --HSLSEQRAGPLVYVLYAVLVHAGWSCHSGQF 336
>gi|386770655|ref|NP_001246639.1| scrawny, isoform G [Drosophila melanogaster]
gi|386770657|ref|NP_001246640.1| scrawny, isoform H [Drosophila melanogaster]
gi|383291776|gb|AFH04310.1| scrawny, isoform G [Drosophila melanogaster]
gi|383291777|gb|AFH04311.1| scrawny, isoform H [Drosophila melanogaster]
Length = 976
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 162/318 (50%), Gaps = 19/318 (5%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFD-HPRPCDGATEG-FCVICALRDHIE 163
VG G+ N+GNTC++N+ LQ H L L S H C+ A G C+ICA+ +
Sbjct: 170 VGTGMINVGNTCYLNSTLQALLHIPALANWLVSEQAHLADCNVAEPGSGCIICAMTKTL- 228
Query: 164 LSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLS 223
L+ S+ + P + L I +QEDAHEFL+ L++ +E L + L
Sbjct: 229 LATQSNQSAVRPFLIYSKLKQICKHMVVGRQEDAHEFLRFLVEAMERAYLMRFRNYKEL- 287
Query: 224 SQGDNIVQ------RVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESF 277
D +V+ ++FGG L S+++C +C S T++ DL L+I SL A E
Sbjct: 288 ---DQLVKETTPLGQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIRKADSLEDAFEGH 344
Query: 278 TKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEF 337
E++ED + CE CK++VS KQ L++ P LKRF G+ K+ K + F
Sbjct: 345 FSRERLED--MGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFSMIGN---KLTKQISF 399
Query: 338 PLELDLKPYTSGGQNSDVE-LKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRV 396
+DL Y + Q + + L Y L ++V H+G+S CGHY + + +++ +DS V
Sbjct: 400 KSRIDLSKYAARSQAAQAQPLTYRLVSMVTHLGASQHCGHYTAIGSTDTGSFYNFDDSYV 459
Query: 397 TRVEEEFVLSQDAYILFY 414
+ V + +AYI+F+
Sbjct: 460 RPIAMHSVCNTNAYIMFF 477
>gi|359324338|ref|XP_540055.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Canis lupus familiaris]
Length = 524
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 91/266 (34%), Positives = 145/266 (54%), Gaps = 13/266 (4%)
Query: 153 CVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCC 212
C++C L+ H+ L G+VL L + + F R++QEDAHE+L +LD ++ C
Sbjct: 112 CMLCTLQAHLMRVLCHPGRVLR------PLPLLLAAFHRHKQEDAHEYLMFILDAMQQAC 165
Query: 213 LDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGS 272
L + Q ++Q++FGG S++QC +C S T EP +D+SL+I D S+
Sbjct: 166 LPEDKLSDPECPQDSTLIQQLFGGYWRSQIQCLHCQGISSTLEPYLDISLDIGDAHSVSQ 225
Query: 273 ALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK-TDGSYVVKI 331
ALE K E +E E + C KC E+V K L L P V L+RF G+ K+
Sbjct: 226 ALEQLVKPELLEG-ENGYHCSKCLEKVPASKVLTLHTSPKVLILVLRRFSDLTGN---KM 281
Query: 332 DKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRL 391
K V++P LD++ Y S + L Y LYA++ + G S GHYF ++++ W+++
Sbjct: 282 TKEVQYPERLDMQHYLS--EQRAGPLVYVLYAVLVYAGRSCHSGHYFCFVKAGNGQWYKM 339
Query: 392 NDSRVTRVEEEFVLSQDAYILFYAKQ 417
+D++V+ + L Q AY+LFY ++
Sbjct: 340 DDAKVSACDVTCALRQPAYVLFYMQK 365
>gi|24658617|ref|NP_729092.1| scrawny, isoform D [Drosophila melanogaster]
gi|23094118|gb|AAN12107.1| scrawny, isoform D [Drosophila melanogaster]
gi|209447207|gb|ACI47091.1| FI06147p [Drosophila melanogaster]
Length = 1038
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 162/318 (50%), Gaps = 19/318 (5%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFD-HPRPCDGATEG-FCVICALRDHIE 163
VG G+ N+GNTC++N+ LQ H L L S H C+ A G C+ICA+ +
Sbjct: 170 VGTGMINVGNTCYLNSTLQALLHIPALANWLVSEQAHLADCNVAEPGSGCIICAMTKTL- 228
Query: 164 LSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLS 223
L+ S+ + P + L I +QEDAHEFL+ L++ +E L + L
Sbjct: 229 LATQSNQSAVRPFLIYSKLKQICKHMVVGRQEDAHEFLRFLVEAMERAYLMRFRNYKEL- 287
Query: 224 SQGDNIVQ------RVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESF 277
D +V+ ++FGG L S+++C +C S T++ DL L+I SL A E
Sbjct: 288 ---DQLVKETTPLGQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIRKADSLEDAFEGH 344
Query: 278 TKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEF 337
E++ED + CE CK++VS KQ L++ P LKRF G+ K+ K + F
Sbjct: 345 FSRERLED--MGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFSMIGN---KLTKQISF 399
Query: 338 PLELDLKPYTSGGQNSDVE-LKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRV 396
+DL Y + Q + + L Y L ++V H+G+S CGHY + + +++ +DS V
Sbjct: 400 KSRIDLSKYAARSQAAQAQPLTYRLVSMVTHLGASQHCGHYTAIGSTDTGSFYNFDDSYV 459
Query: 397 TRVEEEFVLSQDAYILFY 414
+ V + +AYI+F+
Sbjct: 460 RPIAMHSVCNTNAYIMFF 477
>gi|168025605|ref|XP_001765324.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683377|gb|EDQ69787.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 113/375 (30%), Positives = 178/375 (47%), Gaps = 71/375 (18%)
Query: 103 PTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRP-CDGATEGFCVICALRDH 161
P G+ GL NLGNTCF+N++LQ HT PL S H + C C+ C +
Sbjct: 242 PAGL-RGLNNLGNTCFMNSVLQALLHTPPLRNYFLSDRHNQAMCQRGDAQLCLGCDMDII 300
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLE------SCCLDS 215
+ + SP + + +S Y+Q+DAHEF L+ + S C +
Sbjct: 301 FTAAFSGDRTPYSPANFLYSWWRYASNLAGYEQQDAHEFFISLVSGIHDEGGTTSSCKTT 360
Query: 216 KTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE-DVGS----- 269
++ D++ + V RVF G L S + C C S TY+P +D+SL++E D G+
Sbjct: 361 RSGDDNCHCK----VHRVFSGLLRSDVTCTVCDLTSTTYDPCVDISLDLEPDFGTEKGFS 416
Query: 270 ------------------------LGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQL 305
L L+ FT+ E++ E F CE+C+ + KQ+
Sbjct: 417 ESIIHAEHGGRTSRAASSASGASSLLGCLDRFTRPERLGANEKSF-CERCQTRQESIKQM 475
Query: 306 MLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELK------- 358
+ KVP V FH+KRF + K+D++V+FPL LDL PY S +S V L+
Sbjct: 476 SIRKVPLVLCFHIKRFDFTRNQPKKLDRYVQFPLFLDLLPYMS---SSIVRLRHGNRLLS 532
Query: 359 ----------------YHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEE 402
+ L+A+V H G + GHY S++R + W++ +D+ +TRV E+
Sbjct: 533 VSGDASNLPPSQSPSEFELFAVVTHSGKLDS-GHYVSFLRLN-KCWYKCDDAWITRVTED 590
Query: 403 FVLSQDAYILFYAKQ 417
+V + AY+L+Y ++
Sbjct: 591 YVRASQAYMLYYVQK 605
>gi|28416398|gb|AAO42671.1| AT31021p [Drosophila melanogaster]
Length = 1038
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 162/318 (50%), Gaps = 19/318 (5%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFD-HPRPCDGATEG-FCVICALRDHIE 163
VG G+ N+GNTC++N+ LQ H L L S H C+ A G C+ICA+ +
Sbjct: 170 VGTGMINVGNTCYLNSTLQALLHIPALANWLVSEQAHLADCNVAEPGSGCIICAMTKTL- 228
Query: 164 LSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLS 223
L+ S+ + P + L I +QEDAHEFL+ L++ +E L + L
Sbjct: 229 LATQSNQSAVRPFLIYSKLKQICKHMVVGRQEDAHEFLRFLVEAMERAYLMRFRNYKEL- 287
Query: 224 SQGDNIVQ------RVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESF 277
D +V+ ++FGG L S+++C +C S T++ DL L+I SL A E
Sbjct: 288 ---DQLVKETTPLGQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIRKADSLEDAFEGH 344
Query: 278 TKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEF 337
E++ED + CE CK++VS KQ L++ P LKRF G+ K+ K + F
Sbjct: 345 FSRERLED--MGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFSMIGN---KLTKQISF 399
Query: 338 PLELDLKPYTSGGQNSDVE-LKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRV 396
+DL Y + Q + + L Y L ++V H+G+S CGHY + + +++ +DS V
Sbjct: 400 KSRIDLSKYAARSQAAQAQPLTYRLVSMVTHLGASQHCGHYTAIGSTDTGSFYNFDDSYV 459
Query: 397 TRVEEEFVLSQDAYILFY 414
+ V + +AYI+F+
Sbjct: 460 RPIAMHSVCNTNAYIMFF 477
>gi|327412316|ref|NP_001192175.1| ubiquitin specific peptidase 22 [Xenopus (Silurana) tropicalis]
Length = 572
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 107/352 (30%), Positives = 163/352 (46%), Gaps = 43/352 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT PL++ D + C+ + C++C + + +
Sbjct: 224 GLINLGNTCFMNCIVQALTHT-PLLRDFFLSDRHK-CEMQSPNSCLVCEMSTLFQEFYSG 281
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
P +L+ + + Y+Q+DAHEFL LD L C D K + + +
Sbjct: 282 HRSPHIPYRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHCN 341
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE------------------------ 263
I+ ++F G L S + C C S T +P D+SL+
Sbjct: 342 CIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSDSAVVNGES 401
Query: 264 -IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK 322
+ +L L FT+ E + K C C KQL + K+P VA FHLKRF+
Sbjct: 402 HVSGTTTLTDCLRRFTRPEHL-GSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFE 460
Query: 323 TDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMG 369
KI +V FP ELD+ P+ + + S + + KY L+A+V H G
Sbjct: 461 HSAKLRRKITTYVSFPWELDMTPFMASSKESRMNGQYQQPSDSLHNDNKYSLFAVVNHQG 520
Query: 370 SSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
+ + GHY S+IR D W + +D+ +T+ + VL + Y+LFY KQ E+
Sbjct: 521 TLES-GHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHKQFLEY 571
>gi|74870609|sp|Q9VRP5.2|UBP36_DROME RecName: Full=Ubiquitin carboxyl-terminal hydrolase 36; AltName:
Full=Deubiquitinating enzyme 36; AltName: Full=Protein
scrawny; AltName: Full=Ubiquitin thioesterase 36;
AltName: Full=Ubiquitin-specific-processing protease 36
Length = 1085
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 162/318 (50%), Gaps = 19/318 (5%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFD-HPRPCDGATEG-FCVICALRDHIE 163
VG G+ N+GNTC++N+ LQ H L L S H C+ A G C+ICA+ +
Sbjct: 170 VGTGMINVGNTCYLNSTLQALLHIPALANWLVSEQAHLADCNVAEPGSGCIICAMTKTL- 228
Query: 164 LSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLS 223
L+ S+ + P + L I +QEDAHEFL+ L++ +E L + L
Sbjct: 229 LATQSNQSAVRPFLIYSKLKQICKHMVVGRQEDAHEFLRFLVEAMERAYLMRFRNYKEL- 287
Query: 224 SQGDNIVQ------RVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESF 277
D +V+ ++FGG L S+++C +C S T++ DL L+I SL A E
Sbjct: 288 ---DQLVKETTPLGQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIRKADSLEDAFEGH 344
Query: 278 TKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEF 337
E++ED + CE CK++VS KQ L++ P LKRF G+ K+ K + F
Sbjct: 345 FSRERLED--MGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFSMIGN---KLTKQISF 399
Query: 338 PLELDLKPYTSGGQNSDVE-LKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRV 396
+DL Y + Q + + L Y L ++V H+G+S CGHY + + +++ +DS V
Sbjct: 400 KSRIDLSKYAARSQAAQAQPLTYRLVSMVTHLGASQHCGHYTAIGSTDTGSFYNFDDSYV 459
Query: 397 TRVEEEFVLSQDAYILFY 414
+ V + +AYI+F+
Sbjct: 460 RPIAMHSVCNTNAYIMFF 477
>gi|33589646|gb|AAQ22589.1| AT24152p [Drosophila melanogaster]
Length = 948
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 162/318 (50%), Gaps = 19/318 (5%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFD-HPRPCDGATEG-FCVICALRDHIE 163
VG G+ N+GNTC++N+ LQ H L L S H C+ A G C+ICA+ +
Sbjct: 80 VGTGMINVGNTCYLNSTLQALLHIPALANWLVSEQAHLADCNVAEPGSGCIICAMTKTL- 138
Query: 164 LSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLS 223
L+ S+ + P + L I +QEDAHEFL+ L++ +E L + L
Sbjct: 139 LATQSNQSAVRPFLIYSKLKQICKHMVVGRQEDAHEFLRFLVEAMERAYLMRFRNYKEL- 197
Query: 224 SQGDNIVQ------RVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESF 277
D +V+ ++FGG L S+++C +C S T++ DL L+I SL A E
Sbjct: 198 ---DQLVKETTPLGQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIRKADSLEDAFEGH 254
Query: 278 TKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEF 337
E++ED + CE CK++VS KQ L++ P LKRF G+ K+ K + F
Sbjct: 255 FSRERLED--MGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFSMIGN---KLTKQISF 309
Query: 338 PLELDLKPYTSGGQNSDVE-LKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRV 396
+DL Y + Q + + L Y L ++V H+G+S CGHY + + +++ +DS V
Sbjct: 310 KSRIDLSKYAARSQAAQAQPLTYRLVSMVTHLGASQHCGHYTAIGSTDTGSFYNFDDSYV 369
Query: 397 TRVEEEFVLSQDAYILFY 414
+ V + +AYI+F+
Sbjct: 370 RPIAMHSVCNTNAYIMFF 387
>gi|442630418|ref|NP_729093.2| scrawny, isoform I [Drosophila melanogaster]
gi|440215342|gb|AAN12108.2| scrawny, isoform I [Drosophila melanogaster]
Length = 886
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 162/318 (50%), Gaps = 19/318 (5%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFD-HPRPCDGATEG-FCVICALRDHIE 163
VG G+ N+GNTC++N+ LQ H L L S H C+ A G C+ICA+ +
Sbjct: 80 VGTGMINVGNTCYLNSTLQALLHIPALANWLVSEQAHLADCNVAEPGSGCIICAMTKTL- 138
Query: 164 LSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLS 223
L+ S+ + P + L I +QEDAHEFL+ L++ +E L + L
Sbjct: 139 LATQSNQSAVRPFLIYSKLKQICKHMVVGRQEDAHEFLRFLVEAMERAYLMRFRNYKEL- 197
Query: 224 SQGDNIVQ------RVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESF 277
D +V+ ++FGG L S+++C +C S T++ DL L+I SL A E
Sbjct: 198 ---DQLVKETTPLGQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIRKADSLEDAFEGH 254
Query: 278 TKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEF 337
E++ED + CE CK++VS KQ L++ P LKRF G+ K+ K + F
Sbjct: 255 FSRERLED--MGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFSMIGN---KLTKQISF 309
Query: 338 PLELDLKPYTSGGQNSDVE-LKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRV 396
+DL Y + Q + + L Y L ++V H+G+S CGHY + + +++ +DS V
Sbjct: 310 KSRIDLSKYAARSQAAQAQPLTYRLVSMVTHLGASQHCGHYTAIGSTDTGSFYNFDDSYV 369
Query: 397 TRVEEEFVLSQDAYILFY 414
+ V + +AYI+F+
Sbjct: 370 RPIAMHSVCNTNAYIMFF 387
>gi|348505611|ref|XP_003440354.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Oreochromis
niloticus]
Length = 623
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 127/398 (31%), Positives = 181/398 (45%), Gaps = 61/398 (15%)
Query: 104 TGVGA-GLENLGNTCFINAILQ---------CFTHTLPLVQALRS-------FDHPRPCD 146
+GA GL NLGNTCF+NAILQ C+ LP V ALRS H R
Sbjct: 155 VALGATGLRNLGNTCFMNAILQSLSNIEQFSCYFKELPAV-ALRSGKTAGRRMYHTR--S 211
Query: 147 GATEGFCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLD 206
++ R + + SP L + I F+ YQQ+DAHEF++ LLD
Sbjct: 212 QGDNSVSLVEEFRKTLCSLWQGNQTAFSPDSLFYAIWKIMPSFRGYQQQDAHEFMRYLLD 271
Query: 207 RL-----------------ESCCLDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGS 249
L + S T + ++ ++V +FGG L +++ C CG+
Sbjct: 272 HLHRELQYSRNGASHPLSPQDGVRLSSTDGKCCTNGTASVVTSIFGGILQNEVNCLICGT 331
Query: 250 CSDTYEPLIDLSLEIED--------------VGSLGSALESFTKLEKIEDPETKFTCEKC 295
S ++P +DLSL+I +L L SFT LE+++D E + C KC
Sbjct: 332 ESRKFDPFLDLSLDIPSQFRQKRNKDQEPVPTCTLRDCLHSFTDLEELDDTEL-YYCHKC 390
Query: 296 KEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE-LDLKPYTSGGQNS- 353
K++ K+ + K+P V HLKRF K+D +VEFPL+ LD++ Y + S
Sbjct: 391 KKRQKSTKKFWIQKLPKVLCLHLKRFHWTAFLRNKVDTYVEFPLKGLDMRGYLLEPEKSL 450
Query: 354 DVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILF 413
Y L A+V H GS GHY +Y S W+ NDS VT E+ V AYILF
Sbjct: 451 PGSCLYDLVAVVVHHGSGVGSGHYTAY-GSHEGRWYHFNDSTVTLTNEDTVRKAKAYILF 509
Query: 414 YAKQGTEWVSSLLEAESIGMN------ADISNSSPKSV 445
Y ++ + S + S N A + + SP+ V
Sbjct: 510 YVERTGQVPSDTSASNSTATNKPAVDAAAVDSVSPEIV 547
>gi|24658632|ref|NP_729094.1| scrawny, isoform C [Drosophila melanogaster]
gi|23094120|gb|AAN12109.1| scrawny, isoform C [Drosophila melanogaster]
Length = 948
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 162/318 (50%), Gaps = 19/318 (5%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFD-HPRPCDGATEG-FCVICALRDHIE 163
VG G+ N+GNTC++N+ LQ H L L S H C+ A G C+ICA+ +
Sbjct: 80 VGTGMINVGNTCYLNSTLQALLHIPALANWLVSEQAHLADCNVAEPGSGCIICAMTKTL- 138
Query: 164 LSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLS 223
L+ S+ + P + L I +QEDAHEFL+ L++ +E L + L
Sbjct: 139 LATQSNQSAVRPFLIYSKLKQICKHMVVGRQEDAHEFLRFLVEAMERAYLMRFRNYKEL- 197
Query: 224 SQGDNIVQ------RVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESF 277
D +V+ ++FGG L S+++C +C S T++ DL L+I SL A E
Sbjct: 198 ---DQLVKETTPLGQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIRKADSLEDAFEGH 254
Query: 278 TKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEF 337
E++ED + CE CK++VS KQ L++ P LKRF G+ K+ K + F
Sbjct: 255 FSRERLED--MGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFSMIGN---KLTKQISF 309
Query: 338 PLELDLKPYTSGGQNSDVE-LKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRV 396
+DL Y + Q + + L Y L ++V H+G+S CGHY + + +++ +DS V
Sbjct: 310 KSRIDLSKYAARSQAAQAQPLTYRLVSMVTHLGASQHCGHYTAIGSTDTGSFYNFDDSYV 369
Query: 397 TRVEEEFVLSQDAYILFY 414
+ V + +AYI+F+
Sbjct: 370 RPIAMHSVCNTNAYIMFF 387
>gi|354485985|ref|XP_003505162.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A-like, partial
[Cricetulus griseus]
Length = 541
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 164/350 (46%), Gaps = 42/350 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT P+++ D R C+ + C++C + +
Sbjct: 182 GLINLGNTCFMNCIVQALTHT-PILRDFFLSDRHR-CEMPSPELCLVCEMSSLFRELYSG 239
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
+ P KL+ + + Y+Q+DAHEFL LD L C D K S + +
Sbjct: 240 NPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDDVGKVASNPNHCN 299
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE------------------------ 263
I+ ++F G L S + C C S T +P D+SL+
Sbjct: 300 CIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGSCTSFWPMSPGRESSMNGESH 359
Query: 264 IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKT 323
I + +L L FT+ E + K C C+ KQL + K+P VA FH KRF+
Sbjct: 360 IPGITTLTDCLRRFTRPEHL-GSSAKIKCSSCQSYQESTKQLTMKKLPVVACFHFKRFEH 418
Query: 324 DGSYVVKIDKHVEFPLELDLKPYTSGGQ----NSDVEL---------KYHLYAIVEHMGS 370
KI ++ FPLELD+ P+ + + N ++L KY L+A V H G+
Sbjct: 419 SAKQRRKITTYISFPLELDMTPFMASSKETRMNGQLQLPTNSGNNENKYSLFAGVNHQGT 478
Query: 371 SPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTE 420
+ GHY S+IR D W + +D+ + + + VL+ + Y+LFY KQ E
Sbjct: 479 LES-GHYTSFIRHHRDQWFKCDDAVIIKASIKDVLNSEGYLLFYHKQVLE 527
>gi|442630420|ref|NP_647986.3| scrawny, isoform J [Drosophila melanogaster]
gi|440215343|gb|AAN12110.2| scrawny, isoform J [Drosophila melanogaster]
Length = 906
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 162/318 (50%), Gaps = 19/318 (5%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFD-HPRPCDGATEG-FCVICALRDHIE 163
VG G+ N+GNTC++N+ LQ H L L S H C+ A G C+ICA+ +
Sbjct: 100 VGTGMINVGNTCYLNSTLQALLHIPALANWLVSEQAHLADCNVAEPGSGCIICAMTKTL- 158
Query: 164 LSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLS 223
L+ S+ + P + L I +QEDAHEFL+ L++ +E L + L
Sbjct: 159 LATQSNQSAVRPFLIYSKLKQICKHMVVGRQEDAHEFLRFLVEAMERAYLMRFRNYKEL- 217
Query: 224 SQGDNIVQ------RVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESF 277
D +V+ ++FGG L S+++C +C S T++ DL L+I SL A E
Sbjct: 218 ---DQLVKETTPLGQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIRKADSLEDAFEGH 274
Query: 278 TKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEF 337
E++ED + CE CK++VS KQ L++ P LKRF G+ K+ K + F
Sbjct: 275 FSRERLED--MGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFSMIGN---KLTKQISF 329
Query: 338 PLELDLKPYTSGGQNSDVE-LKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRV 396
+DL Y + Q + + L Y L ++V H+G+S CGHY + + +++ +DS V
Sbjct: 330 KSRIDLSKYAARSQAAQAQPLTYRLVSMVTHLGASQHCGHYTAIGSTDTGSFYNFDDSYV 389
Query: 397 TRVEEEFVLSQDAYILFY 414
+ V + +AYI+F+
Sbjct: 390 RPIAMHSVCNTNAYIMFF 407
>gi|345806604|ref|XP_003435458.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like, partial [Canis lupus familiaris]
Length = 408
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 84/230 (36%), Positives = 129/230 (56%), Gaps = 7/230 (3%)
Query: 189 FQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCG 248
F R++QEDAHE+L +LD ++ CL + Q ++Q++FGG S++QC +C
Sbjct: 26 FHRHKQEDAHEYLMFILDAMQQACLPQDKLSDPECPQDSTLIQQLFGGYWRSQIQCLHCQ 85
Query: 249 SCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLD 308
S T EP +D+SL+I D S+ ALE K E +E E + C KC E+V K L L
Sbjct: 86 GISSTLEPYLDISLDIGDAHSVSQALEQLVKPELLEG-ENAYHCSKCLEKVPASKVLTLH 144
Query: 309 KVPSVAAFHLKRFK-TDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEH 367
P V L+RF G+ K+ K V++P LDL+ Y S + L Y LYA++ H
Sbjct: 145 TSPKVLILVLRRFSDLTGN---KMTKEVQYPERLDLQHYLS--EQRTGPLVYVLYAVLVH 199
Query: 368 MGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQ 417
G S GHYF ++++ W++++D++V+ + L Q AY+LFY ++
Sbjct: 200 AGRSCHSGHYFCFVKAGNGQWYKMDDAKVSTCDVTCALRQPAYVLFYMQK 249
>gi|145351953|ref|XP_001420324.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580558|gb|ABO98617.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 312
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 99/316 (31%), Positives = 158/316 (50%), Gaps = 13/316 (4%)
Query: 108 AGLENLGNTCFINAILQCFTHTLPLVQ---ALRSFDHPRPCDGATEGFCVICALRDHIEL 164
+GL N GNTCF + LQC PL + F C T FCV+C H+E
Sbjct: 1 SGLTNGGNTCFAASALQCLRRATPLTAWFDGVEKFHDVARC-AETRKFCVVCEYSQHLER 59
Query: 165 SLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLD--SKTKDESL 222
++AS S +L +++ ++ F+R +QED+HEF+ LLD + L K L
Sbjct: 60 AMASR-DAHSIGRLTKDISKVARQFRRGRQEDSHEFINALLDAMHVIFLKDLGGEKKYDL 118
Query: 223 SSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE-DVGSLGSALESFTKLE 281
++ ++ VFGG + ++C CG S ++ +D+ LE+ +GS+ AL E
Sbjct: 119 RTRETTVIYHVFGGYTLGTVKCLECGYVSKNFQSTLDIPLEVTGKIGSVEEALRENFCTE 178
Query: 282 KIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLEL 341
++ K+ C KCK V +K + P++ LKR+ T G + KI K++++P
Sbjct: 179 EVLSGSNKYKCSKCKALVRAKKGSKIHVSPNILTIPLKRYST-GRFS-KITKYIKYPSNF 236
Query: 342 DLKPYTSGGQNSDVEL-KYHLYAIVEH--MGSSPTCGHYFSYIRSSPDTWHRLNDSRVTR 398
L + S +V +Y L+ ++ H +S GHY +Y++ D+W NDSRV+
Sbjct: 237 SLAEFMSDDAPYEVTAPEYELFGVLVHQDFYASAHSGHYVAYVKLRDDSWVLCNDSRVSP 296
Query: 399 VEEEFVLSQDAYILFY 414
E+ + Q AYILFY
Sbjct: 297 SSEKDAMKQKAYILFY 312
>gi|24658645|ref|NP_729095.1| scrawny, isoform B [Drosophila melanogaster]
gi|15292143|gb|AAK93340.1| LD40339p [Drosophila melanogaster]
gi|23094122|gb|AAN12111.1| scrawny, isoform B [Drosophila melanogaster]
gi|220947254|gb|ACL86170.1| Usp36-PB [synthetic construct]
Length = 968
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 162/318 (50%), Gaps = 19/318 (5%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFD-HPRPCDGATEG-FCVICALRDHIE 163
VG G+ N+GNTC++N+ LQ H L L S H C+ A G C+ICA+ +
Sbjct: 100 VGTGMINVGNTCYLNSTLQALLHIPALANWLVSEQAHLADCNVAEPGSGCIICAMTKTL- 158
Query: 164 LSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLS 223
L+ S+ + P + L I +QEDAHEFL+ L++ +E L + L
Sbjct: 159 LATQSNQSAVRPFLIYSKLKQICKHMVVGRQEDAHEFLRFLVEAMERAYLMRFRNYKEL- 217
Query: 224 SQGDNIVQ------RVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESF 277
D +V+ ++FGG L S+++C +C S T++ DL L+I SL A E
Sbjct: 218 ---DQLVKETTPLGQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIRKADSLEDAFEGH 274
Query: 278 TKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEF 337
E++ED + CE CK++VS KQ L++ P LKRF G+ K+ K + F
Sbjct: 275 FSRERLED--MGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFSMIGN---KLTKQISF 329
Query: 338 PLELDLKPYTSGGQNSDVE-LKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRV 396
+DL Y + Q + + L Y L ++V H+G+S CGHY + + +++ +DS V
Sbjct: 330 KSRIDLSKYAARSQAAQAQPLTYRLVSMVTHLGASQHCGHYTAIGSTDTGSFYNFDDSYV 389
Query: 397 TRVEEEFVLSQDAYILFY 414
+ V + +AYI+F+
Sbjct: 390 RPIAMHSVCNTNAYIMFF 407
>gi|406602917|emb|CCH45581.1| Ubiquitin carboxyl-terminal hydrolase [Wickerhamomyces ciferrii]
Length = 358
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/322 (31%), Positives = 164/322 (50%), Gaps = 16/322 (4%)
Query: 98 PIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICA 157
P K T G N+G+TCF++++LQ H + S H G E C+ C
Sbjct: 43 PTSFKATTGLRGFVNMGSTCFMSSVLQTIIHNPIIRNYFMSEGHIDCLKGKNE--CITCC 100
Query: 158 LRDHIELSLASSGKV--LSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDS 215
+ D I +S K P L+ + Y ++DAHEF Q L++ L
Sbjct: 101 V-DEIITDFFTSNKTSGFGPTSLLSAAWKSNKSLAGYSEQDAHEFWQFLVNELHH---GL 156
Query: 216 KTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVG-SLGSAL 274
+ D SS D +V + F L S + C CG+ ++ +P+IDLSLEI ++ L
Sbjct: 157 TSGDNHNSSTCDCVVHKAFSSDLQSSITCLECGNITNATDPMIDLSLEISGQNDNVVDCL 216
Query: 275 ESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKH 334
+FT+ E+++ K++C KC ++ + KQL + K P+V + LKRFK + +KI+
Sbjct: 217 RNFTQTEQLD---IKYSCSKCNQRTNATKQLSILKFPNVLSLQLKRFKHNNQ-SIKIESF 272
Query: 335 VEFPLELDLKPYTSGGQN--SDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLN 392
++FP+ +++ + + N L Y L+A+V H+GS T GHY + I+++ W R +
Sbjct: 273 IKFPMFINMSEFATISNNVPQAGALNYELFAVVCHIGSVNT-GHYITVIKNNEGKWFRFD 331
Query: 393 DSRVTRVEEEFVLSQDAYILFY 414
DS VT +E E V AY+LFY
Sbjct: 332 DSVVTLLEWEQVSKLQAYLLFY 353
>gi|195356149|ref|XP_002044543.1| GM11729 [Drosophila sechellia]
gi|194132165|gb|EDW53792.1| GM11729 [Drosophila sechellia]
Length = 1022
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 107/334 (32%), Positives = 165/334 (49%), Gaps = 36/334 (10%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL N+GNTCF+N+++QC +HT L + LRS R +T+ ++ I+ S
Sbjct: 698 GLRNIGNTCFMNSVIQCLSHTQELTRFLRSHHGSRSL--STKDQQILHEFAKLIQEMWTS 755
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESL------ 222
+ ++P +L + + Y Q+DA EFL+ LD L S L+S K E+L
Sbjct: 756 NVHTVTPMELKRAFSTKHRMYSDYNQQDAQEFLRFFLDSLHS-ALNSGVKGETLNIDDNL 814
Query: 223 -------------SSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVG- 268
+ +++V+ +F G L S L+C CG+ S T++P DLS+ +
Sbjct: 815 SDNKKADLTWEWYTRHENSLVRDLFVGQLKSTLKCTTCGNTSVTFDPFWDLSVPLPSSSR 874
Query: 269 -SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSY 327
L + L+ F + E++ D + TC KCK + K + + P HLKRF +
Sbjct: 875 CKLDACLDLFIR-EEVLDGDEMPTCAKCKTRRKCTKSFTIQRFPKYLVIHLKRFSE--TR 931
Query: 328 VVKIDKHVEFPL---ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSS 384
K+ VEFP EL++ Y G NS+ + Y LYAI HMGS+ GHY + +
Sbjct: 932 WSKLSNIVEFPTSDSELNMGSY---GANSNSNVHYSLYAISNHMGSTA-GGHYVALCKHP 987
Query: 385 -PDTWHRLNDSRVT-RVEEEFVLSQDAYILFYAK 416
WH ND+ V+ + E ++S AYILFY +
Sbjct: 988 VSRKWHEFNDNIVSDALSENHLVSSSAYILFYER 1021
>gi|392592963|gb|EIW82289.1| cysteine proteinase [Coniophora puteana RWD-64-598 SS2]
Length = 503
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 150/299 (50%), Gaps = 10/299 (3%)
Query: 154 VICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL 213
+ C LR ++ S S +P + L I+ +R +QEDAHEFL+ +D L+ CL
Sbjct: 1 MTCNLRQVMQES-HSKRHAFTPYLVTSKLQLIAKSMRRGRQEDAHEFLRYAVDALQRSCL 59
Query: 214 DSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSA 273
V ++FGG L S++ C +CG SDTY+ ++DLSL+I SL A
Sbjct: 60 SGYPPKMDHKLAETTWVHKLFGGRLRSRVTCRDCGYNSDTYDRILDLSLDIYGSNSLREA 119
Query: 274 LESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDK 333
L F +E ++ + K+ CEKCK+ V EK+ + + P V HLKRF G KI
Sbjct: 120 LRKFVTVEYLKG-QDKYKCEKCKKPVVAEKKFNVHEAPVVLTIHLKRFSPLGR---KIGH 175
Query: 334 HVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLND 393
+ + L L+P S G Y LY ++ H G P GHY++YI+S+ W+ +ND
Sbjct: 176 FIHYDEHLALQPAMSEGS---FGPSYTLYGVICHAGGGPNSGHYYAYIKSANGQWYEMND 232
Query: 394 SRVTRVEEEFVLSQDAYILFYAK-QGTEWVSSLLEAESIGMNADISNSSPKSVLDNVEN 451
V + V ++AYILFY + +G +++ + I+ + +D+ E+
Sbjct: 233 DMVA-PSKVAVGVKNAYILFYMRDKGQSLEAAITRPMPVAKINVIAGMKKRKAMDDDED 290
>gi|432092259|gb|ELK24883.1| Ubiquitin carboxyl-terminal hydrolase 3 [Myotis davidii]
Length = 449
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 123/358 (34%), Positives = 169/358 (47%), Gaps = 51/358 (14%)
Query: 107 GAGLENLGNTCFINAILQ---------CFTHTLPLVQ------ALRSFDHPRPCDGATEG 151
GL NLGNTCF+NAILQ C+ LP V+ A R H R
Sbjct: 87 ATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTR--SQGDNN 144
Query: 152 FCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLE-- 209
++ R + S SP L + I F+ YQQ+DAHEF++ LLD L
Sbjct: 145 VSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE 204
Query: 210 -------SCCLDSKTKDESLSSQ-------GDNIVQRVFGGCLISKLQCCNCGSCSDTYE 255
C ++ +LS+ +V +FGG L +++ C CG+ S ++
Sbjct: 205 LQGGFNGVSCSPILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFD 264
Query: 256 PLIDLSLEIED--------------VGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSV 301
P +DLSL+I V SL L SFT LE++++ E + C KCK++
Sbjct: 265 PFLDLSLDIPSQFRNKRSKNQENGPVCSLRDCLRSFTDLEELDETEL-YMCHKCKKKQKS 323
Query: 302 EKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE-LDLKPYTSGGQNSDVE-LKY 359
K+ + K+P V HLKRF K+D +VEFPL LD+K Y +NS E Y
Sbjct: 324 TKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPENCLY 383
Query: 360 HLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQ 417
L A+V H GS GHY +Y + W NDS VT EE+ V+ AYILFYA++
Sbjct: 384 DLAAVVVHHGSGVGSGHYTAYA-THEGRWFHFNDSTVTLTEEDTVVKAKAYILFYAER 440
>gi|410902430|ref|XP_003964697.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A-like isoform
1 [Takifugu rubripes]
Length = 527
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 112/355 (31%), Positives = 164/355 (46%), Gaps = 47/355 (13%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT PL++ D + C+ + C++C + + +
Sbjct: 177 GLINLGNTCFMNCIVQALTHT-PLLRDFFLSDRHK-CEMQSNS-CLVCEMSQLFQEFYSG 233
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDN 228
P +L+ + + Y+Q+DAHEFL LD L C D + N
Sbjct: 234 HRSPHIPFRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDTINDNGKKANNPN 293
Query: 229 ----IVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEI-------------EDVGSLG 271
I+ ++F G L S + C C S T +P D+SL++ D G++
Sbjct: 294 HCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGGDGGTMN 353
Query: 272 S------------ALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLK 319
L FT+ E + K C C KQL L K+P VA FHLK
Sbjct: 354 GESHLSGSTTLTDCLRRFTRPEHL-GSSAKIKCGGCHSYQESTKQLTLKKLPIVACFHLK 412
Query: 320 RFKTDGSYVVKIDKHVEFPLELDLKPYTS--------GGQNSDVEL-----KYHLYAIVE 366
RF+ KI +V FPLELD+ P+ + G VE+ KY L+A+V
Sbjct: 413 RFEHSAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQTVEVLNNDNKYSLFAVVN 472
Query: 367 HMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
H G+ + GHY S+IR D W + +D+ +T+ + VL + Y+LFY KQ E+
Sbjct: 473 HQGTLES-GHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHKQFLEY 526
>gi|302819973|ref|XP_002991655.1| hypothetical protein SELMODRAFT_2432 [Selaginella moellendorffii]
gi|300140504|gb|EFJ07226.1| hypothetical protein SELMODRAFT_2432 [Selaginella moellendorffii]
Length = 321
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 112/331 (33%), Positives = 168/331 (50%), Gaps = 36/331 (10%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALR--------D 160
GL NLGNTCF N+++Q L V+ L+ + GA+EG + ALR D
Sbjct: 1 GLVNLGNTCFFNSVMQ----NLLAVRYLKDYFLNPVAGGASEG-PLTSALRRFFLEINGD 55
Query: 161 HIELSLASSGK------VLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRL--ESCC 212
++E ++ K +P+ L L SS F Y Q+D+HE L+CLLD L E
Sbjct: 56 NLEAFSGNAKKRHRDYTTYNPKGLFGALCSKSSRFSGYHQQDSHELLRCLLDGLQVEGKH 115
Query: 213 LDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDV--GSL 270
+S+ K+ + + V +FGG S + CC CG S EP +D+SL I + SL
Sbjct: 116 KESEEKNSTNGKEDHTFVDHLFGGQFASTVTCCECGHSSSVLEPFLDVSLPIPFITAKSL 175
Query: 271 GSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDG-SYVV 329
L++FTKLE + E + C+ C + + K+L++ K P V HLKRF D +
Sbjct: 176 EGCLQAFTKLE-VLSGENAWGCDNCTRRKAT-KRLVIRKAPPVLTVHLKRFAQDMRGRLS 233
Query: 330 KIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSP---- 385
K+ HV F L+L P+ S ++ + Y L +VEH G+ GHY +++R
Sbjct: 234 KLTGHVAFDELLNLSPFLSASRDGGL---YRLVGVVEHSGTMKG-GHYVAFVRGGSAGDG 289
Query: 386 --DTWHRLNDSRVTRVEEEFVLSQDAYILFY 414
+ W+ ++DS V R + VL +AY+LFY
Sbjct: 290 KENFWYYISDSDVRRTTLDQVLRSEAYLLFY 320
>gi|198466021|ref|XP_001353862.2| GA18934 [Drosophila pseudoobscura pseudoobscura]
gi|251765181|sp|Q2LZB1.2|UBP36_DROPS RecName: Full=Ubiquitin carboxyl-terminal hydrolase 36; AltName:
Full=Deubiquitinating enzyme 36; AltName: Full=Protein
scrawny; AltName: Full=Ubiquitin thioesterase 36;
AltName: Full=Ubiquitin-specific-processing protease 36
gi|198150413|gb|EAL29597.2| GA18934 [Drosophila pseudoobscura pseudoobscura]
Length = 1059
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/353 (30%), Positives = 176/353 (49%), Gaps = 26/353 (7%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFD-HPRPCD-GATEGFCVICALRDHIE 163
VG G+ N+GNTC++N+ LQ H L L S H C+ + G C+ICA+ ++
Sbjct: 169 VGTGMINVGNTCYLNSTLQALFHIPALANWLVSEQTHLENCNITESNGGCIICAMAKTLQ 228
Query: 164 LSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLS 223
S S + P + L I +QEDAHEFL+ L++ +E L + L
Sbjct: 229 -STQSCQSAMRPFHIYSKLKQICKHMVVGRQEDAHEFLRFLVEAMEKAYLMRFRNFKEL- 286
Query: 224 SQGDNIVQ------RVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESF 277
D +V+ ++FGG L S+++C +C S T++ DL L+I +L A + +
Sbjct: 287 ---DQLVKETTPLNQIFGGYLRSEVRCLSCSHVSITFQHFQDLLLDIRKSDTLEEAFDGY 343
Query: 278 TKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEF 337
E++ED + CE CK++VS KQ L++ P LKRF G+ K+ K + F
Sbjct: 344 FSRERLED--MGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFSMIGN---KLTKTISF 398
Query: 338 PLELDLKPYTSGGQNSDVE-LKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRV 396
+DL + + + + L Y L ++V H+G S CGHY + + +++ +DS V
Sbjct: 399 KPRIDLSRFAARSPAAAAQPLTYRLVSMVTHLGVSQHCGHYTAIGMTESGSYYNFDDSYV 458
Query: 397 TRVEEEFVLSQDAYILFYA---KQGTEWVSSLLEAES----IGMNADISNSSP 442
+ + V + +AYI+FY Q T S+ L + + + A +S+SSP
Sbjct: 459 RPIAMQSVCNTNAYIMFYELDLSQTTPLKSNGLRLTNGHSQVAVPATVSSSSP 511
>gi|354504737|ref|XP_003514430.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 4
[Cricetulus griseus]
Length = 396
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 118/338 (34%), Positives = 160/338 (47%), Gaps = 39/338 (11%)
Query: 108 AGLENLGNTCFINAILQCFTHTLPL----VQALRSFDHPRPCDGATEGFCVICALRDHIE 163
AGL NLGNTCF+N+ILQC ++T L +Q L D + T L I
Sbjct: 58 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLGHTSNAHTALMEEFAKLIQTIW 117
Query: 164 LSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCC----------- 212
S S V+SP + + + F Y Q+DA EFL+ LLD L +
Sbjct: 118 TS--SPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTVRPKPSP 175
Query: 213 --LDSKTKDESLSSQGDNIVQR-------VFGGCLISKLQCCNCGSCSDTYEPLIDLSLE 263
LD DE ++R +F G L S L C +CG CS ++P DLSL
Sbjct: 176 ENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLP 235
Query: 264 IEDVG----SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLK 319
I G +L + FTK E + D + K TC +C+ + K+ + + P + HLK
Sbjct: 236 IAKRGYPEVTLMDCMRLFTK-EDVLDGDEKPTCYRCRARKRCIKKFSVQRFPKILVLHLK 294
Query: 320 RFKTDGSYVVKIDKHVEFPL-ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYF 378
RF K+ V FPL +LDL+ + S N V Y+LYA+ H G++ GHY
Sbjct: 295 RFSESRIRTSKLTTFVNFPLRDLDLREFASENTNHAV---YNLYAVSNHSGTT-MGGHYT 350
Query: 379 SYIRSSPDT--WHRLNDSRVTRVEEEFVLSQDAYILFY 414
+Y R SP T WH NDS VT + V + DAY+LFY
Sbjct: 351 AYCR-SPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFY 387
>gi|301756861|ref|XP_002914278.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Ailuropoda
melanoleuca]
gi|281347308|gb|EFB22892.1| hypothetical protein PANDA_002153 [Ailuropoda melanoleuca]
Length = 520
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 119/358 (33%), Positives = 167/358 (46%), Gaps = 51/358 (14%)
Query: 107 GAGLENLGNTCFINAILQ---------CFTHTLPLVQ------ALRSFDHPRPCDGATEG 151
GL NLGNTCF+NAILQ C+ LP V+ A R H R
Sbjct: 158 ATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTR--SQGDNN 215
Query: 152 FCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLE-- 209
++ R + S SP L + I F+ YQQ+DAHEF++ LLD L
Sbjct: 216 VSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE 275
Query: 210 ----------SCCLDSKT----KDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYE 255
S L + ++ + +V +FGG L +++ C CG+ S ++
Sbjct: 276 LQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFD 335
Query: 256 PLIDLSLEIED--------------VGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSV 301
P +DLSL+I V SL L SFT LE++++ E + C +CK++
Sbjct: 336 PFLDLSLDIPSQFRNKRSKNQENGPVCSLRDCLRSFTDLEELDETEL-YMCHRCKKKQKS 394
Query: 302 EKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE-LDLKPYTSGGQNSDVE-LKY 359
K+ + K+P V HLKRF K+D +VEFPL LD+K Y +NS E Y
Sbjct: 395 TKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPEHCLY 454
Query: 360 HLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQ 417
L A+V H GS GHY +Y + W NDS VT +E+ V+ AYILFY ++
Sbjct: 455 DLAAVVVHHGSGVGSGHYTAYA-AHEGRWFHFNDSTVTLTDEDTVVKAKAYILFYVER 511
>gi|410902432|ref|XP_003964698.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A-like isoform
2 [Takifugu rubripes]
Length = 511
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 112/357 (31%), Positives = 168/357 (47%), Gaps = 50/357 (14%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT PL++ D + C+ + C++C + + +
Sbjct: 160 GLINLGNTCFMNCIVQALTHT-PLLRDFFLSDRHK-CEMQSNS-CLVCEMSQLFQEFYSG 216
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDN 228
P +L+ + + Y+Q+DAHEFL LD L C +D++ + +N
Sbjct: 217 HRSPHIPFRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDTIRDDN-GKKANN 275
Query: 229 ------IVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEI-------------EDVGS 269
I+ ++F G L S + C C S T +P D+SL++ D G+
Sbjct: 276 PNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGGDGGT 335
Query: 270 LGS------------ALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFH 317
+ L FT+ E + K C C KQL L K+P VA FH
Sbjct: 336 MNGESHLSGSTTLTDCLRRFTRPEHL-GSSAKIKCGGCHSYQESTKQLTLKKLPIVACFH 394
Query: 318 LKRFKTDGSYVVKIDKHVEFPLELDLKPYTS--------GGQNSDVEL-----KYHLYAI 364
LKRF+ KI +V FPLELD+ P+ + G VE+ KY L+A+
Sbjct: 395 LKRFEHSAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQTVEVLNNDNKYSLFAV 454
Query: 365 VEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
V H G+ + GHY S+IR D W + +D+ +T+ + VL + Y+LFY KQ E+
Sbjct: 455 VNHQGTLES-GHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHKQFLEY 510
>gi|432863250|ref|XP_004070044.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Oryzias
latipes]
Length = 508
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 125/393 (31%), Positives = 180/393 (45%), Gaps = 56/393 (14%)
Query: 104 TGVGA-GLENLGNTCFINAILQ---------CFTHTLPLVQALRS-------FDHPRPCD 146
+GA GL NLGNTCF+NAILQ C+ LP V ALRS H R
Sbjct: 79 VALGATGLRNLGNTCFMNAILQSLSNIEQFSCYFKELPAV-ALRSGKTAGRRMYHTR--S 135
Query: 147 GATEGFCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLD 206
++ R + + SP L + I F+ YQQ+DAHEF++ LLD
Sbjct: 136 QGDNSVSLVEEFRKTLCSLWQGNQTAFSPDSLFYAIWKIMPSFRGYQQQDAHEFMRYLLD 195
Query: 207 RL-----------------ESCCLDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGS 249
L + S + + ++ ++V +FGG L +++ C CG+
Sbjct: 196 HLHRELQYSRNGASHPVSPQDGVRLSSAEGKCCTNGAPSVVTSIFGGLLQNEVNCLICGT 255
Query: 250 CSDTYEPLIDLSLEIED--------------VGSLGSALESFTKLEKIEDPETKFTCEKC 295
S ++P +DLSL+I +L L SFT LE++++ E + C KC
Sbjct: 256 ESRKFDPFLDLSLDIPSQFRQKRSKDQEPSPTCTLRDCLYSFTDLEELDETEL-YYCHKC 314
Query: 296 KEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE-LDLKPYTSGGQNS- 353
K++ K+ + +P V HLKRF KID +VEFPL+ LD++ Y +NS
Sbjct: 315 KKRQKSTKKFWIHNLPKVLCLHLKRFHWTAFLRNKIDTYVEFPLKGLDMRGYLLEPENSL 374
Query: 354 DVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILF 413
Y L A+V H GS GHY +Y S W+ NDS VT E+ V AYILF
Sbjct: 375 PGSCLYDLVAVVVHHGSGVGSGHYTAY-GSHEACWYHFNDSTVTLTNEDTVRKAKAYILF 433
Query: 414 YAKQGTEWVSSLLEAESIGM-NADISNSSPKSV 445
Y ++ E S + A+ + D+ + SV
Sbjct: 434 YVERTAEVPSDKVAADGAATGDPDVDEAPTHSV 466
>gi|241238064|ref|XP_002401245.1| ubiquitin-specific protease, putative [Ixodes scapularis]
gi|215496141|gb|EEC05782.1| ubiquitin-specific protease, putative [Ixodes scapularis]
Length = 587
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 107/351 (30%), Positives = 160/351 (45%), Gaps = 31/351 (8%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT PL++ D C++C + +
Sbjct: 126 GLMNLGNTCFMNCIVQALTHT-PLLRDYFLADRHVCQFQDDPAMCLVCEMSRLFQEFYCG 184
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDN 228
P +L+ + + Y+Q+DAHEF LD L C + + +
Sbjct: 185 KSTPHIPYRLLHLVWTHARHLAGYEQQDAHEFFIATLDVLHRHCKGTNGISSTNPHHCNC 244
Query: 229 IVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSL--------GSALESFTKL 280
I+ ++F G L S + C +C S T +P D+SL++ L L FT+
Sbjct: 245 IIDQIFTGGLQSDVVCQSCKGVSTTIDPFWDISLDLGPSSHLQQLMPHPGWQTLHLFTRP 304
Query: 281 EKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE 340
E + K C +C+ KQL + K+P V +FHLKRF+ S+ KI + FP
Sbjct: 305 EHLGS-SAKIRCGQCQSYQESTKQLTMKKLPVVCSFHLKRFEHSRSFHKKISSLISFPQY 363
Query: 341 LDLKPYTSGGQNSDVEL-----------------KYHLYAIVEHMGSSPTCGHYFSYIRS 383
LD+ P+ S + + KY L+A+V H G+ T GHY +YIR
Sbjct: 364 LDMSPFMSSSPRAPEAVAQAPEGAQEPSRPCHDNKYCLFAVVNHSGTIET-GHYTAYIRQ 422
Query: 384 SPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEWVSSLLEAESIGMN 434
D W + +D +TR + VL + Y+LFY KQ E+ + + SIG N
Sbjct: 423 HRDRWFKCDDHLITRASLQDVLDSEGYLLFYHKQILEYEA---QGGSIGAN 470
>gi|297473553|ref|XP_002707829.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin specific peptidase
17-like 2-like [Bos taurus]
gi|296488783|tpg|DAA30896.1| TPA: ubiquitin specific peptidase 17-like [Bos taurus]
Length = 473
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/223 (37%), Positives = 126/223 (56%), Gaps = 6/223 (2%)
Query: 195 EDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTY 254
EDAHEFL L+ ++ CL S ++ +S+ +++++FGG S++QC C SDT+
Sbjct: 111 EDAHEFLMFTLNAMQQGCL-SASQPSGHASEDTTVIRQIFGGTWRSQIQCLRCLGVSDTF 169
Query: 255 EPLIDLSLEIEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVA 314
+P +D+SL+I S+ AL K EK+ D + + C C +V K+L L V
Sbjct: 170 DPYLDISLDITAAQSVEQALRELVKPEKL-DADNAYDCGVCLRKVPATKRLTLHSTSQVL 228
Query: 315 AFHLKRFKTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTC 374
LKRF K + V +P LDL+PYTS + L Y LYA++ H G S
Sbjct: 229 VLVLKRFTPVSG--AKRAQEVRYPQCLDLQPYTS--ERKAGPLGYVLYAVLVHSGWSCER 284
Query: 375 GHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQ 417
GHYF Y+R+ W++++D++VT +E LSQ AY+LFYA++
Sbjct: 285 GHYFCYVRAGNGQWYKMDDAKVTACDETAALSQSAYVLFYARE 327
>gi|359484748|ref|XP_003633155.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Vitis
vinifera]
Length = 587
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 176/395 (44%), Gaps = 77/395 (19%)
Query: 103 PTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRP-CDGATEG---------- 151
P G+ GL NLGNTCF+N++LQ HT PL S H R C
Sbjct: 191 PWGL-RGLNNLGNTCFMNSVLQALLHTPPLRNYFLSDRHNRYYCQQKNNASNASKRNAAS 249
Query: 152 ----------FCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFL 201
C+ C + + SP K + + ++ Y+Q+DAHEF
Sbjct: 250 NDSNSNKNLRLCLACDMDAMFSAVFSGDRTPYSPAKFLYSWWQHAANLASYEQQDAHEFF 309
Query: 202 QCLLDRLESCCLDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLS 261
+LD + K K +S + I RVF G L S + C CG S TY+P +D+S
Sbjct: 310 ISMLDGIHEKMGKDKRKTQSQGNGECCIAHRVFSGILRSDVMCMACGFTSTTYDPCVDIS 369
Query: 262 LEIE-------------------------------DVGSLGSALESFTKLEKIEDPETKF 290
L++E +L L+ FT+ E++ + KF
Sbjct: 370 LDLEPNQGVSTKMGSTKSHHSCNGEADSMNSSQNCGTSTLMGCLDRFTRPERLGS-DQKF 428
Query: 291 TCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDG--SYVVKIDKHVEFPLELDLKPYTS 348
C++C+ + KQ+ + K+P V+ FH+KRF+ + K+D++++FP LD+ PY S
Sbjct: 429 FCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSIRNMSRKVDRYLQFPFSLDMAPYLS 488
Query: 349 GG-------------------QNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWH 389
++++ ++ L+A+V H G GHY +Y+R S + W+
Sbjct: 489 SSILRSRFGNRIFSFDGDEPDASNELSSEFELFAVVTHTGKLDA-GHYVTYLRLS-NQWY 546
Query: 390 RLNDSRVTRVEEEFVLSQDAYILFYAKQGTEWVSS 424
+ +D+ +T+V E V + Y++FY ++ + +S
Sbjct: 547 KCDDAWITQVNENIVRAAQGYMMFYVQKMLYYKAS 581
>gi|356552474|ref|XP_003544592.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Glycine
max]
Length = 554
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 112/362 (30%), Positives = 179/362 (49%), Gaps = 59/362 (16%)
Query: 103 PTGVGAGLENLGNTCFINAILQCFTHTLPLV-------QALRSFDHPRPCDGATEGFCVI 155
P G+ GL NLG+TC++N++LQ H P Q L + H R D C++
Sbjct: 176 PLGL-RGLNNLGSTCYMNSVLQVLLHAPPFRDYFLSGGQRLEACHHRRATDLMC---CLL 231
Query: 156 CALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDS 215
C + + SP + + + S+ Y+Q+DAHEF +LD + +
Sbjct: 232 CDVNAIFSAVYSGDRSPYSPAQFLYSWWQHSANLACYEQQDAHEFFISMLDAIHE--KEG 289
Query: 216 KTKDESLSSQGDN--IVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE-DVGS--- 269
KT++ S GD I +VF G L S + C CG S TY+P +D+SL ++ DV S
Sbjct: 290 KTRNGS-KGNGDCQCIAHKVFYGLLRSDVTCMACGFTSTTYDPCVDISLNLDTDVSSTEK 348
Query: 270 ---------------LGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVA 314
L L+ FT+ EK+ + K C+ C+E+ KQ+ + K+P V
Sbjct: 349 GKKLTKQNEDGSMSTLSGCLDLFTRPEKL-GSDQKLYCQNCRERQDSLKQMSIRKLPLVL 407
Query: 315 AFHLKRFKTDGSYVV----KIDKHVEFPLELDLKPY---------------TSGGQNSDV 355
+ H+KRF + S+V KID+++ FP LD+ PY T GG SD+
Sbjct: 408 SLHVKRF--EHSFVKKCSRKIDRYLHFPFSLDMTPYLSSSILRARYGNRNFTFGGDQSDM 465
Query: 356 ELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYA 415
++ ++A+V H G+ + GHY S++R + W+R ND+ +T V+E V + Y++FY
Sbjct: 466 FSEFEIFAVVTHSGTLES-GHYVSFVRVR-NQWYRCNDAWITVVDEATVRASQCYMIFYV 523
Query: 416 KQ 417
++
Sbjct: 524 QK 525
>gi|50294832|ref|XP_449827.1| hypothetical protein [Candida glabrata CBS 138]
gi|49529141|emb|CAG62807.1| unnamed protein product [Candida glabrata]
Length = 461
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 108/335 (32%), Positives = 168/335 (50%), Gaps = 44/335 (13%)
Query: 108 AGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLA 167
AGL N+G+TC++++I+QC H +++ H C C CA+ I
Sbjct: 137 AGLVNMGSTCYMSSIMQCIIHNPYMIRYFMCQQHSNNCTLKMASNCTSCAISSIIADFYG 196
Query: 168 SSGK-------------------VLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRL 208
+S + + K+ +NL Y Q+DAHE+ Q +L+ +
Sbjct: 197 NSVQNDYKSKKNNNNKHEGFINLLTCSWKVNENL-------AGYSQQDAHEYWQFILNHI 249
Query: 209 ESCCLDSKTKDESLSSQGDN-----IVQRVFGGCLISKLQCCNCGSCSDT-YEPLIDLSL 262
D K+ S+ S D+ +V F G L S + C C + S T ++P IDLSL
Sbjct: 250 HQ---DYKS---SMHSHSDDKLCNCVVHSSFQGSLKSSIVCPECNNDSKTTFDPFIDLSL 303
Query: 263 EIEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK 322
I+D +L L++F K E++ D + F C+KC+ Q + KQ ++K+P V LKRF+
Sbjct: 304 GIKDKHTLTECLDNFHKKEQLHDYD--FFCKKCQAQQNPIKQFTINKLPPVLVLQLKRFE 361
Query: 323 TDGSYV-VKIDKHVEFPLELDLKPYTSGGQNSDVE--LKYHLYAIVEHMGSSPTCGHYFS 379
S V K++ ++EFP LD+KPY QN D + + Y L I+ H GS GHY +
Sbjct: 362 HLMSGVNQKLNDYIEFPKILDMKPYLKDNQNPDEDPSILYELIGIISHTGSVNE-GHYVA 420
Query: 380 YIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFY 414
+ + W + NDS VT++ E+ VL + AY+LFY
Sbjct: 421 FCKIENGEWFKFNDSMVTKILEKDVLKEQAYLLFY 455
>gi|389742087|gb|EIM83274.1| cysteine proteinase, partial [Stereum hirsutum FP-91666 SS1]
Length = 382
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 112/353 (31%), Positives = 175/353 (49%), Gaps = 38/353 (10%)
Query: 95 KHWPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQ-ALRSFDHPRPCDGATE--- 150
+ +P+ G GLEN GNTC+ N++LQ P ++S D P + ++
Sbjct: 31 QQFPVSSLADGKQFGLENFGNTCYANSVLQALYFCAPFRDLIIQSTDSSSPTNLSSPTSL 90
Query: 151 GFCV-------ICALRD---HIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEF 200
GF + ALR I + G V SPR +D L ++ F+ +DAHEF
Sbjct: 91 GFSIPPSPPTLFSALRSLFVFISKNPMDRGTV-SPRAFIDKLKEVNELFRSTMHQDAHEF 149
Query: 201 LQCLLDRL-ESCCLDSKTKDE--------SLSSQGDN-IVQRVFGGCLISKLQCCNCGSC 250
L LL+++ E +D KD+ + SSQ D +V R+F G L S+ +C C +
Sbjct: 150 LNYLLNKIVEEVGVDEHHKDKDGEGEDLRTGSSQDDTTLVHRLFEGVLTSETRCLTCETV 209
Query: 251 SDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKV 310
S E +DLS++IE S+ + L F+ E + + KF C+ C EK++ + K+
Sbjct: 210 SSRDESFLDLSIDIEQNSSVTACLRQFSASEMLCQ-KNKFFCDSCCGLQEAEKRMKIKKL 268
Query: 311 PSVAAFHLKRFKT--DGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHM 368
P+V A HLKRFK D +K+ V FPLEL L + + D + Y L+AIV H+
Sbjct: 269 PNVLALHLKRFKYQDDVQKYIKLAYRVAFPLELRL--FNTVDDAQDPDRLYELFAIVVHI 326
Query: 369 GSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFV-------LSQDAYILFY 414
G+ P GHY + ++ P +W +D ++ ++E + S AY+L+Y
Sbjct: 327 GNGPHHGHYITIVK-GPTSWLVFDDDKIGPIKESDIPKYFGDSPSGSAYVLYY 378
>gi|391340120|ref|XP_003744393.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like
[Metaseiulus occidentalis]
Length = 465
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/342 (32%), Positives = 160/342 (46%), Gaps = 38/342 (11%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+QC THT L + S H C ++ C++C + +
Sbjct: 130 GLYNLGNTCFMNCIIQCLTHTPFLREYFLSQQHK--CIRSSPADCLVCEMCSIFQEFY-- 185
Query: 169 SGKVLS--PRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQG 226
SGK+ P +L+ + + Y+Q+DAHEF L+ + + D S
Sbjct: 186 SGKIFPHVPTRLLYLVWTHAQHLAGYEQQDAHEFFMATLNLVHK---HASGTDIPYSGGC 242
Query: 227 DNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE-------------DVGSLGSA 273
+ I+ +F G L S + C +C S T EP D+SL++ D L
Sbjct: 243 NCIIDVIFTGSLQSDVVCQSCHGVSTTIEPFWDISLDLGQQTAGDSRKPRSLDRKKLTDC 302
Query: 274 LESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDK 333
LE+FT+ E + K C KC KQL K+P V +FHLKRF+ K+
Sbjct: 303 LENFTRAEHL-GSAAKIKCSKCNSYQESTKQLTFKKLPLVVSFHLKRFEHSKLLHKKVST 361
Query: 334 HVEFPLELDLKPY--------------TSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFS 379
+ FP +LDL PY TS + Y L+ +V H G+ T GHY +
Sbjct: 362 PIAFPQQLDLSPYMAKPEEQEEADPTSTSHDPSFSRPHTYSLFGVVIHQGTLQT-GHYTA 420
Query: 380 YIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
YIR SP+ W + +D + E VL+ +AY+LFY K+ E+
Sbjct: 421 YIRQSPNGWFKCDDCEIKTATIEEVLNCEAYLLFYHKKYIEY 462
>gi|302818855|ref|XP_002991100.1| hypothetical protein SELMODRAFT_2225 [Selaginella moellendorffii]
gi|300141194|gb|EFJ07908.1| hypothetical protein SELMODRAFT_2225 [Selaginella moellendorffii]
Length = 320
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 112/331 (33%), Positives = 168/331 (50%), Gaps = 36/331 (10%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALR--------D 160
GL NLGNTCF N+++Q L V+ L+ + GA+EG + ALR D
Sbjct: 1 GLVNLGNTCFFNSVMQ----NLLAVRYLKDYFLNPVAAGASEG-PLTSALRRFFLEINGD 55
Query: 161 HIELSLASSGK------VLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRL--ESCC 212
++E ++ K +P+ L L SS F Y Q+D+HE L+CLLD L E
Sbjct: 56 NLEAFSGNAKKRHRDYTTYNPKGLFGALCSKSSRFSGYHQQDSHELLRCLLDGLQVEGKH 115
Query: 213 LDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDV--GSL 270
+S+ K+ + + V +FGG S + CC CG S EP +D+SL I + SL
Sbjct: 116 KESEEKNSANGKEDHTFVDHLFGGQFASTVTCCECGHSSSVLEPFLDVSLPIPFITAKSL 175
Query: 271 GSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDG-SYVV 329
L++FTKLE + E + C+ C + + K+L++ K P V HLKRF D +
Sbjct: 176 EGCLQAFTKLE-VLSGENAWGCDNCTRRKAT-KRLVIRKAPPVLTVHLKRFAQDMRGRLS 233
Query: 330 KIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSP---- 385
K+ HV F L+L P+ S ++ + Y L +VEH G+ GHY +++R
Sbjct: 234 KLTGHVAFDELLNLSPFLSTSRDGGL---YRLVGVVEHSGTMKG-GHYVAFVRGGSAGDG 289
Query: 386 --DTWHRLNDSRVTRVEEEFVLSQDAYILFY 414
+ W+ ++DS V R + VL +AY+LFY
Sbjct: 290 KENFWYYISDSDVRRTTLDQVLRSEAYLLFY 320
>gi|3800764|gb|AAC68865.1| ubiquitin specific protease 66 [Gallus gallus]
Length = 587
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 117/339 (34%), Positives = 159/339 (46%), Gaps = 43/339 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLV------QALRSFDHPRPCDGATEGFCVICALRDHI 162
GL NLGNTCF+N+ILQC ++T L Q LR + + + ++ I
Sbjct: 47 GLRNLGNTCFMNSILQCLSNTKELRDYCLQNQYLRDLN-----NNSRMRTPLMSEFAKLI 101
Query: 163 ELSLASS-GKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLD-------------RL 208
+L SS +SP + + + F Y Q+DA EFL+ LLD R
Sbjct: 102 QLLWTSSPNDSVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHGEVNRVLVRPRA 161
Query: 209 ESCCLDSKTKDES-------LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLS 261
+ LD DE + D+ V +F G L S L C CG CS ++P DLS
Sbjct: 162 NADTLDHLPDDEKSRQMWRRYQEREDSRVSDLFVGQLKSSLTCSECGYCSTAFDPFWDLS 221
Query: 262 LEIEDVG----SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFH 317
L I G +L L FTK E + D + K TC +CK + K+ + K P + H
Sbjct: 222 LPIPKKGYGEVTLMDCLRLFTK-EDVLDGDEKPTCCRCKARTRCTKKFSIQKFPKILVLH 280
Query: 318 LKRFKTDGSYVVKIDKHVEFPL-ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGH 376
LKRF K+ V FPL +LDL+ + S N V Y+LYA+ H G++ GH
Sbjct: 281 LKRFSEARIRASKLTTFVNFPLKDLDLREFASQSCNHAV---YNLYAVANHSGTT-MGGH 336
Query: 377 YFSYIRSSP-DTWHRLNDSRVTRVEEEFVLSQDAYILFY 414
Y +Y + WH NDSRVT + V S DAY+LFY
Sbjct: 337 YTAYCKEPHLQEWHSFNDSRVTPMSSSHVRSSDAYLLFY 375
>gi|24643793|ref|NP_728455.1| CG14619, isoform C [Drosophila melanogaster]
gi|386764876|ref|NP_001245799.1| CG14619, isoform F [Drosophila melanogaster]
gi|386764878|ref|NP_001245800.1| CG14619, isoform G [Drosophila melanogaster]
gi|22832693|gb|AAN09566.1| CG14619, isoform C [Drosophila melanogaster]
gi|28317311|gb|AAO39652.1| AT11044p [Drosophila melanogaster]
gi|262331596|gb|ACY46087.1| MIP13335p [Drosophila melanogaster]
gi|383293538|gb|AFH07511.1| CG14619, isoform F [Drosophila melanogaster]
gi|383293539|gb|AFH07512.1| CG14619, isoform G [Drosophila melanogaster]
Length = 938
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 106/334 (31%), Positives = 165/334 (49%), Gaps = 36/334 (10%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL N+GNTCF+N+++QC +HT L + LRS R +T+ ++ I+ +
Sbjct: 614 GLRNIGNTCFMNSVIQCLSHTQELTRFLRSHHGSRSL--STKDQQILHEFAKLIQEMWTA 671
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESL------ 222
+ ++P +L + + Y Q+DA EFL+ LD L S L+S K E+L
Sbjct: 672 NVHTVTPMELKRAFSTKHRMYSDYNQQDAQEFLRFFLDSLHS-ALNSGVKGETLNIDDNL 730
Query: 223 -------------SSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVG- 268
+ +++V+ +F G L S L+C CG+ S T++P DLS+ +
Sbjct: 731 SDNKKADLTWEWYTRHENSLVRDLFVGQLKSTLKCTTCGNTSVTFDPFWDLSVPLPSSSR 790
Query: 269 -SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSY 327
L + L+ F + E++ D + TC KCK + K + + P HLKRF +
Sbjct: 791 CKLEACLDLFIR-EEVLDGDEMPTCAKCKTRRKCTKSFTIQRFPKYLVIHLKRFSE--TR 847
Query: 328 VVKIDKHVEFPL---ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSS 384
K+ VEFP EL++ Y G NS+ + Y LYAI HMGS+ GHY + +
Sbjct: 848 WSKLSNIVEFPTSDSELNMGSY---GANSNSNVHYSLYAISNHMGST-AGGHYVALCKHP 903
Query: 385 PD-TWHRLNDSRVT-RVEEEFVLSQDAYILFYAK 416
WH ND+ V+ + E ++S AYILFY +
Sbjct: 904 VSRKWHEFNDNIVSDALSENHLVSSSAYILFYER 937
>gi|19920418|ref|NP_608462.1| CG14619, isoform A [Drosophila melanogaster]
gi|24643789|ref|NP_728453.1| CG14619, isoform D [Drosophila melanogaster]
gi|24643791|ref|NP_728454.1| CG14619, isoform E [Drosophila melanogaster]
gi|17862942|gb|AAL39948.1| SD04280p [Drosophila melanogaster]
gi|22832690|gb|AAF50952.2| CG14619, isoform A [Drosophila melanogaster]
gi|22832691|gb|AAN09564.1| CG14619, isoform D [Drosophila melanogaster]
gi|22832692|gb|AAN09565.1| CG14619, isoform E [Drosophila melanogaster]
Length = 856
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 106/334 (31%), Positives = 165/334 (49%), Gaps = 36/334 (10%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL N+GNTCF+N+++QC +HT L + LRS R +T+ ++ I+ +
Sbjct: 532 GLRNIGNTCFMNSVIQCLSHTQELTRFLRSHHGSRSL--STKDQQILHEFAKLIQEMWTA 589
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESL------ 222
+ ++P +L + + Y Q+DA EFL+ LD L S L+S K E+L
Sbjct: 590 NVHTVTPMELKRAFSTKHRMYSDYNQQDAQEFLRFFLDSLHS-ALNSGVKGETLNIDDNL 648
Query: 223 -------------SSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVG- 268
+ +++V+ +F G L S L+C CG+ S T++P DLS+ +
Sbjct: 649 SDNKKADLTWEWYTRHENSLVRDLFVGQLKSTLKCTTCGNTSVTFDPFWDLSVPLPSSSR 708
Query: 269 -SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSY 327
L + L+ F + E++ D + TC KCK + K + + P HLKRF +
Sbjct: 709 CKLEACLDLFIR-EEVLDGDEMPTCAKCKTRRKCTKSFTIQRFPKYLVIHLKRFSE--TR 765
Query: 328 VVKIDKHVEFPL---ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSS 384
K+ VEFP EL++ Y G NS+ + Y LYAI HMGS+ GHY + +
Sbjct: 766 WSKLSNIVEFPTSDSELNMGSY---GANSNSNVHYSLYAISNHMGST-AGGHYVALCKHP 821
Query: 385 -PDTWHRLNDSRVT-RVEEEFVLSQDAYILFYAK 416
WH ND+ V+ + E ++S AYILFY +
Sbjct: 822 VSRKWHEFNDNIVSDALSENHLVSSSAYILFYER 855
>gi|125817446|ref|XP_001337596.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Danio
rerio]
gi|125817457|ref|XP_692507.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Danio
rerio]
Length = 398
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 119/338 (35%), Positives = 160/338 (47%), Gaps = 40/338 (11%)
Query: 108 AGLENLGNTCFINAILQCFTHTLPL----VQALRSFDHPRPCDGATEGFCVICALRDHIE 163
GL NLGNTCF+N+ILQC ++T L ++ D C L I
Sbjct: 62 VGLRNLGNTCFMNSILQCLSNTHDLRDYCLRNTHRTDLNNNCRAKAALMDEFAKLTQTIW 121
Query: 164 LSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCC----------- 212
S +S + +SP + + F Y Q+DA EFL+ LLD L +
Sbjct: 122 TS--ASNEAISPSDFKMQIQKYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTVKSRAPV 179
Query: 213 --LDSKTKDES--------LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSL 262
LD ++DE L S+ +V +F G L S L C CG CS ++P DLSL
Sbjct: 180 EDLDHLSEDEKGKRMWNKYLESEDSKVVD-LFVGQLKSSLTCSECGFCSTVFDPFWDLSL 238
Query: 263 EIEDVG---SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLK 319
I SL L FTK E + D + TC +CK + K+ + K P + HLK
Sbjct: 239 PIAKTSGEVSLNDCLRLFTK-EDVLDGNERPTCHRCKTRRKCTKKFTIQKFPKILVLHLK 297
Query: 320 RFKTDGSYVVKIDKHVEFPL-ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYF 378
RF K+ V FPL ELDL+ + S ++ V Y+LYA+ H G+S GHY
Sbjct: 298 RFSECRVRTSKLSTFVNFPLKELDLREFAS---DNSVNAVYNLYAVSNHTGTS-LGGHYT 353
Query: 379 SYIRSSPDT--WHRLNDSRVTRVEEEFVLSQDAYILFY 414
+Y R SP T W+ NDSRV+ + V S DAY+LFY
Sbjct: 354 AYCR-SPCTGEWYTYNDSRVSPMSSSQVCSSDAYVLFY 390
>gi|225430521|ref|XP_002283376.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Vitis
vinifera]
Length = 553
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 103/363 (28%), Positives = 176/363 (48%), Gaps = 44/363 (12%)
Query: 101 IKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPC--DGATEGFCVICAL 158
I P G+ GL NLGNTCF+N++LQ H PL S H R +++ C+ C +
Sbjct: 173 IFPLGL-RGLNNLGNTCFMNSVLQALFHAPPLRNYFLSDRHNRQSCRRRSSDRLCLPCDI 231
Query: 159 RDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTK 218
+ SP + + + S Y+Q+DAHEF +LD++ S +
Sbjct: 232 DVIFSAVFSGDRTPYSPARFLYSWWQHSENLASYEQQDAHEFFISMLDQIHVKEGKSGNQ 291
Query: 219 DESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE------------- 265
D+ + I + F G L S + C CG S TY+P +D+SL ++
Sbjct: 292 DKD-NRDCQCIAHKAFSGLLRSDVTCTTCGFTSTTYDPCVDISLNLDMSFCPSTGMTNRT 350
Query: 266 -------DVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHL 318
+ +L L+ FT+ EK+ P+ K C+ C+E+ + KQ+ + ++P V H+
Sbjct: 351 TKPNENAIISTLLGCLDLFTRPEKL-GPDQKLYCQNCQERRNSLKQMSIRRLPIVLCLHI 409
Query: 319 KRFK--TDGSYVVKIDKHVEFPLELDLKPYTSG---------------GQNSDVELKYHL 361
KRF+ T KID++++FP LD+ PY S G S+ ++ +
Sbjct: 410 KRFEHSTIRKMSRKIDQYLQFPFSLDMTPYLSSSIVRNRFGNRIFTFEGDESETCTEFEV 469
Query: 362 YAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
+A+V H G + GHY +Y+R + W++ +D+ +T V+E V + Y+++Y ++G +
Sbjct: 470 FAVVTHSGMLES-GHYVTYVRVR-NRWYKCDDAWITEVDEGVVRASQCYLMYYVQKGFYY 527
Query: 422 VSS 424
+S
Sbjct: 528 KAS 530
>gi|195174068|ref|XP_002027804.1| GL16307 [Drosophila persimilis]
gi|194115480|gb|EDW37523.1| GL16307 [Drosophila persimilis]
Length = 530
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 178/362 (49%), Gaps = 26/362 (7%)
Query: 97 WPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFD-HPRPCD-GATEGFCV 154
W + VG G+ N+GNTC++N+ LQ H L L S H C+ + G C+
Sbjct: 161 WKQSERKWQVGTGMINVGNTCYLNSTLQALFHIPALANWLVSEQTHLENCNITESNGGCI 220
Query: 155 ICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLD 214
ICA+ ++ S S + P + L I +QEDAHEFL+ L++ +E L
Sbjct: 221 ICAMAKTLQ-STQSCQSAMRPFHIYSKLKQICKHMVVGRQEDAHEFLRFLVEAMEKAYLM 279
Query: 215 SKTKDESLSSQGDNIVQ------RVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVG 268
+ L D +V+ ++FGG L S+++C +C S T++ DL L+I
Sbjct: 280 RFRNFKEL----DQLVKETTPLNQIFGGYLRSEVRCLSCSHVSITFQHFQDLLLDIRKSD 335
Query: 269 SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYV 328
+L A + + E++ED + CE CK++VS KQ L++ P LKRF G+
Sbjct: 336 TLEEAFDGYFSRERLED--MGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFSMIGN-- 391
Query: 329 VKIDKHVEFPLELDLKPYTSGGQNSDVE-LKYHLYAIVEHMGSSPTCGHYFSYIRSSPDT 387
K+ K + F +DL + + + + L Y L ++V H+G S CGHY + + +
Sbjct: 392 -KLTKTISFKPRIDLSRFAARSPAAAAQPLTYRLVSMVTHLGVSQHCGHYTAIGMTESGS 450
Query: 388 WHRLNDSRVTRVEEEFVLSQDAYILFY---AKQGTEWVSSLLEAES----IGMNADISNS 440
++ +DS V + + V + +AYI+FY Q T S+ L + + + A +S+S
Sbjct: 451 YYNFDDSYVRPIAMQSVCNTNAYIMFYELDLSQTTPLKSNGLRLTNGHSPVAVPATVSSS 510
Query: 441 SP 442
SP
Sbjct: 511 SP 512
>gi|156388867|ref|XP_001634714.1| predicted protein [Nematostella vectensis]
gi|156221800|gb|EDO42651.1| predicted protein [Nematostella vectensis]
Length = 462
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 116/371 (31%), Positives = 176/371 (47%), Gaps = 25/371 (6%)
Query: 54 DKDQNNDDDDDYEEIYRDTRPISSSYGRYNWGSSLLSRPVEKHWPIQI-KPTGVGA-GLE 111
DKD +N + D Y +R + + + S + +E ++I K + +G GL
Sbjct: 103 DKDFDNINRDQYRRAWRKLGNGCAKFLPWEPTKSEVKLFLENPKKVKITKNSTIGLRGLI 162
Query: 112 NLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLASSGK 171
NLGNTCF+N I+Q THT L S H D T C++C + + +
Sbjct: 163 NLGNTCFMNCIVQALTHTPLLRDYFLSDQHNCKGDAGT---CLVCEMGLLFQEFYSGQKV 219
Query: 172 VLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDN--- 228
SP KL+ + + Y+Q+DAHEF LD L + C + ++ N
Sbjct: 220 PHSPFKLLHLVWTHARHLAGYEQQDAHEFFIAALDVLHNYCKEDAPDKLAVKPNNHNQCN 279
Query: 229 -IVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED-- 285
I+ R+F G L S + C C S T +P D+SL D+G L F + + E
Sbjct: 280 CIIDRIFTGGLQSDVICQTCNCVSTTVDPFWDISL---DLGHGDHKLVIFCRFTRPESLG 336
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKP 345
E+K C KC+ KQL + K+P V FHLKRF+ KI ++ FP ELD+ P
Sbjct: 337 SESKIKCNKCQSYQESTKQLSMRKLPIVVCFHLKRFEHSKK-SKKISTYIPFPQELDMAP 395
Query: 346 YTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL 405
+ S KY L+A+V H G+ GHY ++IR + W + +D+ +T+ + VL
Sbjct: 396 FLSS--------KYSLFAVVNHSGTLEV-GHYTAFIRQQ-NNWFKCDDAWITKATIDDVL 445
Query: 406 SQDAYILFYAK 416
+ Y+LFY +
Sbjct: 446 QSEGYLLFYHR 456
>gi|344257555|gb|EGW13659.1| Ubiquitin carboxyl-terminal hydrolase DUB-1 [Cricetulus griseus]
Length = 306
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 97/304 (31%), Positives = 151/304 (49%), Gaps = 14/304 (4%)
Query: 185 ISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDNIVQRVFGGCLISKLQC 244
++ F R +QEDAHEFL L+ + CL + E SS+ + +FGG S+++C
Sbjct: 7 LTGAFHRQKQEDAHEFLMFTLNAMHEACLQGRKPSEE-SSKDSTPIYEIFGGSWRSQVRC 65
Query: 245 CNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQ 304
C SD + P +D+ L+I + S+ ALE K E++ E + C+ C+E+ K
Sbjct: 66 LQCQGTSDAFSPFLDVLLDIHEAHSVKQALEYLVKAEELCG-ENAYFCDHCQEKTPALKS 124
Query: 305 LMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAI 364
L + V L R + S K D+ V +P LDL+PY S Q++ L Y LYA+
Sbjct: 125 LAIQGASKVLLLVLNR--SSDSAGGKTDRKVRYPESLDLRPYMS--QSNRGPLVYALYAV 180
Query: 365 VEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEWVSS 424
+ H G++ GHYF Y+R+ W++++DS VTR E VLS+ AY+LFY QGT
Sbjct: 181 LVHAGATCHSGHYFCYVRAGNGKWYKMDDSTVTRCEVASVLSESAYLLFYV-QGT----- 234
Query: 425 LLEAESIGMNADISNSSPKSVLDNVENDYTSRSGVANAESCKANEPSASAGDSSTKFSCQ 484
+ +N + + + + RS V AE + E +A+ S ++
Sbjct: 235 --DGRGDSVNRPVGTGNKAHAGKGWQKKHKRRSCVQAAEPRREPEEAAAQAKSLDQWKHD 292
Query: 485 LRSI 488
SI
Sbjct: 293 FISI 296
>gi|426358879|ref|XP_004046717.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Gorilla gorilla gorilla]
Length = 407
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 89/268 (33%), Positives = 145/268 (54%), Gaps = 13/268 (4%)
Query: 154 VICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL 213
++C ++ H+ +L G V+ P + +++ F R +QEDAHEFL +D ++ CL
Sbjct: 1 MLCTMQAHVTRALYRPGHVIQPSQA------LAAGFHRGKQEDAHEFLMFAVDAMKKACL 54
Query: 214 DSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSA 273
K S ++ ++FGG S+++C +C SDT++P +D++L+I+ S+ A
Sbjct: 55 PGH-KQVDHHSNDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVKQA 113
Query: 274 LESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDK 333
LE K E++ + E + C C ++ K L L V LKRF + K+ K
Sbjct: 114 LEQLVKPEEL-NGENAYQCGLCLQKAPASKTLTLHTSAKVLILVLKRFSDVTAN--KLAK 170
Query: 334 HVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLND 393
+V++P LD++PY S Q + L Y LYA++ H G S HY SY+++ W++++D
Sbjct: 171 NVQYPECLDMQPYMS--QQNTGPLVYVLYAVLVHAGWSCHSRHYLSYVKAQEGQWYKMDD 228
Query: 394 SRVTRVEEEFVLSQDAYILFYAKQGTEW 421
+ VT VLSQ AY LFY Q +EW
Sbjct: 229 AEVTASGITSVLSQQAYDLFYI-QKSEW 255
>gi|291402890|ref|XP_002718220.1| PREDICTED: ubiquitin thiolesterase 3 [Oryctolagus cuniculus]
Length = 520
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 128/367 (34%), Positives = 173/367 (47%), Gaps = 59/367 (16%)
Query: 107 GAGLENLGNTCFINAILQ---------CFTHTLPLVQ------ALRSFDHPRPCDGATEG 151
GL NLGNTCF+NAILQ C+ LP V+ A R H R G T
Sbjct: 158 ATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRS-QGDT-S 215
Query: 152 FCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRL--- 208
++ R + S SP L + I F+ YQQ+DAHEF++ LLD L
Sbjct: 216 VSLVEEFRKTLCALWQGSQTAFSPESLFYVIWKIMPNFRGYQQQDAHEFMRYLLDHLHLE 275
Query: 209 ---------------ESCCLDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDT 253
E+ L + +K + +V +FGG L +++ C CG+ S
Sbjct: 276 LQGGFNGVSRSAVLQENSTLSASSK--CCVNGASTVVTAIFGGILQNEVNCLICGTESRK 333
Query: 254 YEPLIDLSLEIED--------------VGSLGSALESFTKLEKIEDPETKFTCEKCKEQV 299
++P +DLSL+I V SL L SFT LE++++ E + C KCK++
Sbjct: 334 FDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETEL-YMCHKCKKKQ 392
Query: 300 SVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE-LDLKPYTSGGQNSDVE-L 357
K+ + K+P V HLKRF K+D +VEFPL LD+K Y +NSD E
Sbjct: 393 KSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSDPENC 452
Query: 358 KYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFY--- 414
Y L A+V H GS GHY +Y + W NDS VT +EE V AYILFY
Sbjct: 453 LYDLAAVVVHHGSGVGSGHYTAYA-THEGRWFHFNDSTVTLTDEETVGKAKAYILFYVEH 511
Query: 415 -AKQGTE 420
A+ G+E
Sbjct: 512 QARAGSE 518
>gi|393213328|gb|EJC98825.1| cysteine proteinase [Fomitiporia mediterranea MF3/22]
Length = 846
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 106/343 (30%), Positives = 167/343 (48%), Gaps = 43/343 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQ-ALRSFDHPRPCDGATEG---------------- 151
GLEN GNTC++N++ Q P + +++ D P + G
Sbjct: 41 GLENFGNTCYVNSVFQALYFCHPFRELIIQAHDKSNPPVTNSNGSAPLTGPPIPIAPPTM 100
Query: 152 FCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESC 211
F + AL HI + G V++PR V+ L + F+ +DAHEFL LL+++
Sbjct: 101 FSALRALFVHISSNSLDKG-VVAPRAFVEKLKKENELFRSSMHQDAHEFLIYLLNKIAED 159
Query: 212 CLDSKTKDESLSSQGD----------NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLS 261
+ S SS G+ NIV +F G L S+ +C C + S E +DLS
Sbjct: 160 LEEEARNVRSGSSSGEDRKTNSSTNSNIVHDLFEGVLTSETRCLTCETVSSRDEAFLDLS 219
Query: 262 LEIEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRF 321
++IE S+ + L F+ E + + KF C+ C EK++ + ++P+V A HLKRF
Sbjct: 220 IDIEQNSSVTACLRQFSASEMLCQ-KNKFFCDSCCGLQEAEKRMKIKRLPNVLALHLKRF 278
Query: 322 KTD---GSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYF 378
K G Y +K+ V FPLEL L + + D + Y L+AIV H+G+ P GHY
Sbjct: 279 KYQEDVGKY-IKLAYRVAFPLELRL--FNTADDAVDPDRLYELFAIVIHIGNGPYHGHYV 335
Query: 379 SYIRSSPDTWHRLNDSRVTRVEEEFVL-------SQDAYILFY 414
+ ++S+ ++W +D V +++E + S AY+LFY
Sbjct: 336 AIVKSN-ESWLVFDDDSVEKIKESDISKYYGDSNSGAAYVLFY 377
>gi|348525308|ref|XP_003450164.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like
[Oreochromis niloticus]
Length = 510
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 108/355 (30%), Positives = 162/355 (45%), Gaps = 47/355 (13%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT PL++ D + C+ + C++C + + +
Sbjct: 160 GLINLGNTCFMNCIVQALTHT-PLLRDFFLSDRHK-CEMQSNS-CLVCEMSQLFQEFYSG 216
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDN 228
P +L+ + + Y+Q+DAHEFL LD L C D + N
Sbjct: 217 HRSPHIPFRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDTINDNGKKANNPN 276
Query: 229 ----IVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEI-------------------- 264
I+ ++F G L S + C C S T +P D+SL++
Sbjct: 277 HCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGGDGSTVN 336
Query: 265 -----EDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLK 319
+L L FT+ E + K C C KQL + K+P VA FHLK
Sbjct: 337 GESHLSGSTTLTDCLRRFTRPEHL-GSSAKIKCGGCHSYQESTKQLTMKKLPIVACFHLK 395
Query: 320 RFKTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVE 366
RF+ KI +V FPLELD+ P+ + + S + + KY L+A+V
Sbjct: 396 RFEHSAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQSVDVLNNDNKYSLFAVVN 455
Query: 367 HMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
H G+ + GHY S+IR D W + +D+ +T+ + VL + Y+LFY KQ E+
Sbjct: 456 HQGTLES-GHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHKQFLEY 509
>gi|387019607|gb|AFJ51921.1| Ubiquitin carboxyl-terminal hydrolase 21 [Crotalus adamanteus]
Length = 629
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 129/401 (32%), Positives = 181/401 (45%), Gaps = 63/401 (15%)
Query: 74 PISSSYGRYN----------WGSSLLSRPVEKHWPIQIKPTGVG-AGLENLGNTCFINAI 122
P+++ YGR + LLSR +K G G GL NLGNTCF+NA+
Sbjct: 236 PLATEYGRSQDILMSASPPPSKTPLLSRLEDKATTHHTLLLGSGHIGLRNLGNTCFMNAV 295
Query: 123 LQCFTHTLPLVQAL--RSFDHPRPC-----DGATEGFCVICALRDHIELSLASSGKVLSP 175
LQC + T PL R F +PC TE + A H + S A++ P
Sbjct: 296 LQCLSSTKPLRDYCLRREFRQEQPCTLRTQQELTEALADVIATLWHPDTSEAAN-----P 350
Query: 176 RKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRL---------ESCCLDSKTK-------D 219
+ F Y Q+DA EFL+ L+DRL +S C+ S K
Sbjct: 351 SRFKSVFQKYVPSFTGYSQQDAQEFLKFLMDRLHVEINRKGRKSPCILSDAKWPSVLEDS 410
Query: 220 ESLS--SQGDNIVQR-----------VFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIED 266
E+LS Q + + +R +F G L S L+C CG S T+E DLSL I
Sbjct: 411 ETLSDDEQANQMWKRYLEREDSKIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPK 470
Query: 267 VGSLG---SALESFTKLEKIE--DPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRF 321
G G S L+ F K E D E C+KC+++ K+L + + P + HL RF
Sbjct: 471 KGFAGGKVSLLDCFNLFTKEEELDSENAPVCDKCRQRTRSTKKLTIQRFPRILVLHLNRF 530
Query: 322 KTDGSYVVKIDKHVEFPL-ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSY 380
T + K +V+FPL +L+LK + S + V Y+LYA+ H GS GHY ++
Sbjct: 531 STTRYSIKKCSVYVDFPLQQLNLKEFASEKAGTPV---YNLYALCNHSGSV-HYGHYTAF 586
Query: 381 IRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
+ W NDSRV+ + E + S + Y+LFY W
Sbjct: 587 CKDQ-SGWRVFNDSRVSPISENQIPSSEGYVLFYELDDFHW 626
>gi|432868293|ref|XP_004071466.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A-like isoform
1 [Oryzias latipes]
Length = 510
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 111/355 (31%), Positives = 163/355 (45%), Gaps = 47/355 (13%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT PL++ D + C+ + C++C + + +
Sbjct: 160 GLINLGNTCFMNCIVQALTHT-PLLRDFFLSDRHK-CEMQSNS-CLVCEMSQLFQEFYSG 216
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDN 228
P +L+ + + Y+Q+DAHEFL LD L C D + N
Sbjct: 217 HRSPHIPFRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDTINDNGKKANNPN 276
Query: 229 ----IVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEI-------------EDVGS-- 269
I+ ++F G L S + C C S T +P D+SL++ D G+
Sbjct: 277 HCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGGDSGTVN 336
Query: 270 ----------LGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLK 319
L L FT+ E + K C C KQL + K+P VA FHLK
Sbjct: 337 GEGHLSGSTTLTDCLRRFTRPEHL-GSSAKIKCGGCHSYQESTKQLTMKKLPIVACFHLK 395
Query: 320 RFKTDGSYVVKIDKHVEFPLELDLKPYTS--------GGQNSDVEL-----KYHLYAIVE 366
RF+ KI +V FPLELD+ P+ + G VE+ KY L+A+V
Sbjct: 396 RFEHSAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQTVEVLNNDNKYSLFAVVN 455
Query: 367 HMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
H G+ + GHY S+IR D W + +D+ +T+ + VL + Y+LFY K E+
Sbjct: 456 HQGTLES-GHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHKHFLEY 509
>gi|156088681|ref|XP_001611747.1| ubiquitin carboxyl-terminal hydrolase family protein [Babesia
bovis]
gi|154799001|gb|EDO08179.1| ubiquitin carboxyl-terminal hydrolase family protein [Babesia
bovis]
Length = 713
Score = 152 bits (384), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 109/324 (33%), Positives = 154/324 (47%), Gaps = 22/324 (6%)
Query: 106 VGAGLENLG-NTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGF-CVICALRDHIE 163
+ GL N G N CF+N I+Q TH+ L A+ H + C A CV C L HI+
Sbjct: 96 MAGGLHNPGINICFMNVIIQVLTHSPYLAPAMLRSGHSKVCPNAKRKMVCVTCLLESHIK 155
Query: 164 LSLASSGKVLSPRKLVDNLNYISS--FFQRYQ---QEDAHEFLQCLLDRLESCCLDSK-- 216
+L+S P L +N YI ++ Y+ QEDA FL+ + L C SK
Sbjct: 156 RALSS------PCALKNNFVYIVQKLIWKHYRLGRQEDAFIFLKHFFEALIKGCYGSKYP 209
Query: 217 -TKDESLSSQG--DNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSA 273
T + S+ + + R+FG L++ + C C S+ E D+S++I L
Sbjct: 210 YTSSVIIPSKDMMQSFIGRIFGCFLLNVVICKVCNYRSEKLETCFDISVDIYRGNKLVDL 269
Query: 274 LESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDK 333
L SF + E + D K+ C CK K + + + P + LKRF + K K
Sbjct: 270 LSSFVQPELL-DSANKYNCPSCKTHQRATKAMSIYRAPRIMNVVLKRFGMSETGCEKSKK 328
Query: 334 HVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLND 393
V FPL + TS V + Y LYA+V H+G S GHY ++I+ WH ND
Sbjct: 329 EVSFPLSFSMSLNTSK-HPQPVWVTYELYAVVCHLGRSLNMGHYITFIKGQHGFWHSYND 387
Query: 394 SRVTRVEEEFVLS--QDAYILFYA 415
S VT V ++ VL QDAY+LFYA
Sbjct: 388 STVTTVSQKAVLGLRQDAYLLFYA 411
>gi|45382531|ref|NP_990257.1| ubiquitin carboxyl-terminal hydrolase 2 [Gallus gallus]
gi|3800760|gb|AAC68863.1| ubiquitin specific protease 46 [Gallus gallus]
Length = 403
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 117/340 (34%), Positives = 157/340 (46%), Gaps = 43/340 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLV------QALRSFDHPRPCDGATEGFCVICALRDHI 162
GL NLGNTC++N+ILQC ++T L Q LR F+ + + + I
Sbjct: 20 GLRNLGNTCYMNSILQCLSNTKELRDYCLQNQYLRDFN-----NNSRMRTAFMSEFAKLI 74
Query: 163 ELSLASS-GKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLD-------------RL 208
+L SS +SP + + + F Y Q+DA EFL+ LLD R
Sbjct: 75 QLFWTSSPNDSVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHGEVNRVLVRPRA 134
Query: 209 ESCCLDSKTKDES-------LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLS 261
+ LD DE + D+ V F G L S L CG CS ++P DLS
Sbjct: 135 NADTLDHFPDDEKSRQMWRRYQEREDSPVSDFFLGQLKSSLTSSECGYCSTAFDPFWDLS 194
Query: 262 LEIEDVG----SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFH 317
L I G +L L FTK E + D + K TC +CK + K+ + K P + H
Sbjct: 195 LPIPKKGYGEVTLMHCLPLFTK-EDLLDGDEKPTCCRCKARTRCTKKFSIQKFPKILLLH 253
Query: 318 LKRFKTDGSYVVKIDKHVEFPL-ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGH 376
LKRF K+ V+FPL +LDL+ + S N V Y LY + H G++ GH
Sbjct: 254 LKRFSEARIRASKLTTFVDFPLKDLDLREFASQSCNHAV---YKLYGVSNHSGTT-MGGH 309
Query: 377 YFSYI-RSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYA 415
Y + R SP WH NDSRVT + V S DAY+LFY
Sbjct: 310 YHCLLKRPSPAEWHSFNDSRVTPMSSTHVRSSDAYLLFYG 349
>gi|115446845|ref|NP_001047202.1| Os02g0573400 [Oryza sativa Japonica Group]
gi|46806341|dbj|BAD17530.1| putative ubiquitin-specific protease 3 (UBP3) [Oryza sativa
Japonica Group]
gi|113536733|dbj|BAF09116.1| Os02g0573400 [Oryza sativa Japonica Group]
Length = 415
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 116/377 (30%), Positives = 174/377 (46%), Gaps = 60/377 (15%)
Query: 85 GSSLLSRPVEKHWPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRP 144
G S L + + H+P + GLEN GNTC+ N++LQ H +P + L +
Sbjct: 53 GVSKLEKALGDHFPEGARY----FGLENFGNTCYCNSVLQALYHCIPFREQLLEYYATYK 108
Query: 145 CDGATEGFCVICA--LRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQ 202
+E + C L I L+ +G VL+P++ V + + F+ Y +DAHEF
Sbjct: 109 NTEDSEDNLLTCLADLFSQITLAKKRTG-VLAPKRFVQRVRKQNELFRSYMHQDAHEFWN 167
Query: 203 CL----LDRLESCCLDSKTKDESLSSQGD-----------------NIVQRVFGGCLISK 241
L +D LE C + + E+ + +V R F G L ++
Sbjct: 168 FLVNDIIDILEEDCRTANSSPETTPEEVSNGAANALANGARERPLVTLVHRTFQGILTNE 227
Query: 242 LQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSV 301
+C C + + E DLS+++E SL S L+SF E I + E KF C+KC
Sbjct: 228 TKCLMCDTITAKDETFFDLSIDVEQNSSLTSCLKSFFSTE-ILNGEDKFFCDKCSSLQEA 286
Query: 302 EKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKH------VEFPLELDLKPYTSGGQNSDV 355
K++ + K P V HLKRFK YV ++ +H V +PLEL L G + D
Sbjct: 287 HKRMKIKKAPHVLVIHLKRFK----YVEQLSRHKKLSYRVVYPLELKL-----GSMSEDA 337
Query: 356 ELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL---------- 405
+ +Y L+A+V H+GSSP GHY S I+S + W +D V ++ EE L
Sbjct: 338 DCEYSLFAVVVHVGSSPNHGHYVSQIKSHGN-WLSFDDDTV-QISEESTLQTFYGSSREH 395
Query: 406 ----SQDAYILFYAKQG 418
+ YILFY + G
Sbjct: 396 CGGNTDHGYILFYERLG 412
>gi|3800762|gb|AAC68864.1| ubiquitin specific protease 52 [Gallus gallus]
Length = 465
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 117/339 (34%), Positives = 159/339 (46%), Gaps = 43/339 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLV------QALRSFDH-PRPCDGATEGFCVICALRDH 161
GL NLGNTCF+N+ILQC ++T L Q LR ++ R F + L
Sbjct: 128 GLGNLGNTCFMNSILQCLSNTKELRDYCLQNQYLRDLNNNSRMRTALMSEFAKLIQL--- 184
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLD-------------RL 208
L +S +SP + + + F Y Q+DA EFL+ LLD R
Sbjct: 185 --LWTSSPNHSVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHGEVNRVLVRPRA 242
Query: 209 ESCCLDSKTKDES-------LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLS 261
+ LD DE + D+ V +F L S L C CG CS ++P DLS
Sbjct: 243 NADTLDHLPDDEKSRQMWRRYQEREDSRVSDLFVAQLKSSLTCSECGYCSTAFDPFWDLS 302
Query: 262 LEIEDVG----SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFH 317
L I G +L L FTK E + D + K TC +CK + K+ + K P + H
Sbjct: 303 LPIPKKGYGEVTLMDCLRLFTK-EDVLDGDEKPTCCRCKARTRCTKKFSIQKFPKILVLH 361
Query: 318 LKRFKTDGSYVVKIDKHVEFPL-ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGH 376
LKRF K+ V FPL +LDL+ + S N V Y+LYA+ H G++ GH
Sbjct: 362 LKRFSEARIRASKLTTFVNFPLKDLDLREFASQSCNHAV---YNLYAVSNHSGAT-MGGH 417
Query: 377 YFSYIRSSPDT-WHRLNDSRVTRVEEEFVLSQDAYILFY 414
Y +Y +S + WH NDSRVT + V + DAY+LFY
Sbjct: 418 YTAYCKSPISSEWHSFNDSRVTPMSSSHVPTSDAYLLFY 456
>gi|167998913|ref|XP_001752162.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696557|gb|EDQ82895.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 344
Score = 152 bits (383), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 116/354 (32%), Positives = 168/354 (47%), Gaps = 56/354 (15%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPC--DGATEGFCVICALRDHIELSL 166
GL NLGNTCF N+++Q L V LR + P +G + + R S
Sbjct: 1 GLMNLGNTCFFNSVMQ----NLVGVSMLREYFSKEPSVQEGDGDDDSKSASARTMRTRSF 56
Query: 167 -ASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRL---ESCCLDSKTKDESL 222
A+ G +SP +L + + F+ +QQ+D+HE L+CLLD L E ++ ES
Sbjct: 57 GANVGNAVSPTRLFSAICAKAPRFKGFQQQDSHELLRCLLDGLHMEEESARKAQLSAESP 116
Query: 223 S----------SQGDNI------VQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIED 266
+ S G+ I V+ VFGG S + CC CG S YEP +DLSL I
Sbjct: 117 TEPNGTVKEEGSHGNPIKVPVTFVEHVFGGQFSSTVSCCVCGHSSVVYEPFLDLSLPIPS 176
Query: 267 --------VGSLGSALESFTKLEKIEDPETKFTCEKC-KEQVSVEKQLMLDKVPSVAAFH 317
+ SL L++FTK E + E + CE C K + + K+ ++ K P V H
Sbjct: 177 AREVYTYPMMSLEGCLQAFTKTEVLSG-ENAWGCENCAKVERNATKRFLISKAPRVLTVH 235
Query: 318 LKRFKTD-GSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGH 376
LKRF D + K+ H+ F +LDL P+T G + Y L VEH G+ GH
Sbjct: 236 LKRFAQDLHGRLSKLSGHITFHEQLDLGPFTDKGWDG----VYQLIGTVEHSGTM-RGGH 290
Query: 377 YFSYIRSSPD--------------TWHRLNDSRVTRVEEEFVLSQDAYILFYAK 416
Y +Y++ S + TW+ ++DS V + E VL +AY+LFY +
Sbjct: 291 YVAYVKGSVNYEESEADDSPKGASTWYYISDSHVRKTSLEAVLQSEAYLLFYER 344
>gi|432868295|ref|XP_004071467.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A-like isoform
2 [Oryzias latipes]
Length = 527
Score = 152 bits (383), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 111/355 (31%), Positives = 163/355 (45%), Gaps = 47/355 (13%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT PL++ D + C+ + C++C + + +
Sbjct: 177 GLINLGNTCFMNCIVQALTHT-PLLRDFFLSDRHK-CEMQSNS-CLVCEMSQLFQEFYSG 233
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDN 228
P +L+ + + Y+Q+DAHEFL LD L C D + N
Sbjct: 234 HRSPHIPFRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDTINDNGKKANNPN 293
Query: 229 ----IVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEI-------------EDVGS-- 269
I+ ++F G L S + C C S T +P D+SL++ D G+
Sbjct: 294 HCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGGDSGTVN 353
Query: 270 ----------LGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLK 319
L L FT+ E + K C C KQL + K+P VA FHLK
Sbjct: 354 GEGHLSGSTTLTDCLRRFTRPEHL-GSSAKIKCGGCHSYQESTKQLTMKKLPIVACFHLK 412
Query: 320 RFKTDGSYVVKIDKHVEFPLELDLKPYTS--------GGQNSDVEL-----KYHLYAIVE 366
RF+ KI +V FPLELD+ P+ + G VE+ KY L+A+V
Sbjct: 413 RFEHSAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQTVEVLNNDNKYSLFAVVN 472
Query: 367 HMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
H G+ + GHY S+IR D W + +D+ +T+ + VL + Y+LFY K E+
Sbjct: 473 HQGTLES-GHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHKHFLEY 526
>gi|395502639|ref|XP_003755686.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Sarcophilus
harrisii]
Length = 711
Score = 152 bits (383), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 126/366 (34%), Positives = 172/366 (46%), Gaps = 61/366 (16%)
Query: 109 GLENLGNTCFINAILQ---------CFTHTLPLVQ------ALRSFDHPRPCDGATEGFC 153
GL NLGNTCF+NAILQ C+ LP V+ A R H R
Sbjct: 351 GLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRTYHTR--SQGDNNVS 408
Query: 154 VICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRL----- 208
++ R + S SP L + I F+ YQQ+DAHEF++ LLD L
Sbjct: 409 LVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQ 468
Query: 209 -------ESCCLDSKTKDESLSSQ-------GDNIVQRVFGGCLISKLQCCNCGSCSDTY 254
S L ++ SLS+ +V +FGG L +++ C CG+ S +
Sbjct: 469 GGFNGVSRSVILQ---ENSSLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKF 525
Query: 255 EPLIDLSLEIED--------------VGSLGSALESFTKLEKIEDPETKFTCEKCKEQVS 300
+P +DLSL+I + SL L SFT LE++++ E + C KCK++
Sbjct: 526 DPFLDLSLDIPSQFRNKRSKNQENGPLCSLRDCLRSFTDLEELDETEL-YMCHKCKKKQK 584
Query: 301 VEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE-LDLKPYTSGGQNSDVE-LK 358
K+ + K+P V HLKRF K+D +VEFPL LD+K Y +NS E
Sbjct: 585 STKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPESCL 644
Query: 359 YHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFY---- 414
Y L A+V H GS GHY +Y + W NDS VT +EE V+ AYILFY
Sbjct: 645 YDLAAVVVHHGSGVGSGHYTAYA-THEGRWFHFNDSTVTLTDEETVVKAKAYILFYVERQ 703
Query: 415 AKQGTE 420
A+ G+E
Sbjct: 704 ARSGSE 709
>gi|281346341|gb|EFB21925.1| hypothetical protein PANDA_019055 [Ailuropoda melanoleuca]
Length = 511
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 109/342 (31%), Positives = 159/342 (46%), Gaps = 43/342 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT PL++ D R C+ + C++C + + +
Sbjct: 174 GLINLGNTCFMNCIVQALTHT-PLLRDFFLSDRHR-CEMQSPSSCLVCEMSSLFQEFYSG 231
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
P KL+ + + Y+Q+DAHEFL LD L C D K + + +
Sbjct: 232 HRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHCN 291
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDV---------GSLGSA----- 273
I+ ++F G L S + C C S T +P D+SL++ GS GS
Sbjct: 292 CIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGSVVNGES 351
Query: 274 -----------LESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK 322
L FT+ E + K C C KQL + KVP VA FHLKRF+
Sbjct: 352 HVAGTTTLTDCLRRFTRPEHL-GSGAKIKCSGCHSYQESTKQLTMKKVPIVACFHLKRFE 410
Query: 323 TDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMG 369
KI +V FPLELD+ P+ + + S + + KY L+A+V H G
Sbjct: 411 HSAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQLTDSLNNDNKYSLFAVVNHQG 470
Query: 370 SSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYI 411
+ + GHY S+IR D W + +D+ +T+ E VL + Y+
Sbjct: 471 TLES-GHYTSFIRQHKDQWFKCDDAIITKASIEDVLDSEGYV 511
>gi|395822291|ref|XP_003784454.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 1
[Otolemur garnettii]
Length = 520
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 124/365 (33%), Positives = 169/365 (46%), Gaps = 55/365 (15%)
Query: 107 GAGLENLGNTCFINAILQ---------CFTHTLPLVQ------ALRSFDHPRPCDGATEG 151
GL NLGNTCF+NAILQ C+ LP V+ A R H R
Sbjct: 158 ATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTR--SQGDNN 215
Query: 152 FCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESC 211
++ R + S SP L + I F+ YQQ+DAHEF++ LLD L
Sbjct: 216 VSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE 275
Query: 212 CLDS----------------KTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYE 255
D T ++ + +V +FGG L +++ C CG+ S ++
Sbjct: 276 LQDGFNGVSHSAILQENSTLSTSNKCCINGSSTVVTAIFGGILQNEVNCLICGTESRKFD 335
Query: 256 PLIDLSLEIED--------------VGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSV 301
P +DLSL+I V SL L SFT LE++++ E + C KCK++
Sbjct: 336 PFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETEL-YMCHKCKKKQKS 394
Query: 302 EKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE-LDLKPYTSGGQNSDVE-LKY 359
K+ + K+P V HLKRF K+D +VEFPL LD+K Y +NS E Y
Sbjct: 395 TKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPENCLY 454
Query: 360 HLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFY----A 415
L A+V H GS GHY +Y + W NDS VT +EE V+ AYILFY A
Sbjct: 455 DLAAVVVHHGSGVGSGHYTAYA-THEGRWFHFNDSTVTLTDEETVVKAKAYILFYVERQA 513
Query: 416 KQGTE 420
K G++
Sbjct: 514 KAGSD 518
>gi|395822293|ref|XP_003784455.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 2
[Otolemur garnettii]
Length = 476
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 124/365 (33%), Positives = 169/365 (46%), Gaps = 55/365 (15%)
Query: 107 GAGLENLGNTCFINAILQ---------CFTHTLPLVQ------ALRSFDHPRPCDGATEG 151
GL NLGNTCF+NAILQ C+ LP V+ A R H R
Sbjct: 114 ATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTR--SQGDNN 171
Query: 152 FCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESC 211
++ R + S SP L + I F+ YQQ+DAHEF++ LLD L
Sbjct: 172 VSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE 231
Query: 212 CLDS----------------KTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYE 255
D T ++ + +V +FGG L +++ C CG+ S ++
Sbjct: 232 LQDGFNGVSHSAILQENSTLSTSNKCCINGSSTVVTAIFGGILQNEVNCLICGTESRKFD 291
Query: 256 PLIDLSLEIED--------------VGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSV 301
P +DLSL+I V SL L SFT LE++++ E + C KCK++
Sbjct: 292 PFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETEL-YMCHKCKKKQKS 350
Query: 302 EKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE-LDLKPYTSGGQNSDVE-LKY 359
K+ + K+P V HLKRF K+D +VEFPL LD+K Y +NS E Y
Sbjct: 351 TKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPENCLY 410
Query: 360 HLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFY----A 415
L A+V H GS GHY +Y + W NDS VT +EE V+ AYILFY A
Sbjct: 411 DLAAVVVHHGSGVGSGHYTAYA-THEGRWFHFNDSTVTLTDEETVVKAKAYILFYVERQA 469
Query: 416 KQGTE 420
K G++
Sbjct: 470 KAGSD 474
>gi|125539986|gb|EAY86381.1| hypothetical protein OsI_07760 [Oryza sativa Indica Group]
Length = 415
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 114/376 (30%), Positives = 174/376 (46%), Gaps = 58/376 (15%)
Query: 85 GSSLLSRPVEKHWPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRP 144
G S L + + +H+P + GLEN GNTC+ N++LQ H +P + L +
Sbjct: 53 GVSKLEKALGEHFPEGERY----FGLENFGNTCYCNSVLQALYHCIPFREQLLEYYATYK 108
Query: 145 CDGATEGFCVICALRDHIELSLASS-GKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQC 203
+E + C +++LA VL+P++ V + + F+ Y +DAHEF
Sbjct: 109 NTEDSEDNLLTCLADLFAQITLAKKRTGVLAPKRFVQRVRKQNELFRSYMHQDAHEFWNF 168
Query: 204 L----LDRLESCCLDSKTKDESLSSQGD-----------------NIVQRVFGGCLISKL 242
L +D LE C + + E+ + +V R F G L ++
Sbjct: 169 LVNDIIDILEEDCRTANSSPETTPEEVSNGAANALANGARERPLVTLVHRTFQGILTNET 228
Query: 243 QCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVE 302
+C C + + E DLS+++E SL S L+SF E I + E KF C+KC
Sbjct: 229 KCLMCDTITAKDETFFDLSIDVEQNSSLTSCLKSFFSTE-ILNGEDKFFCDKCSSLQEAH 287
Query: 303 KQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKH------VEFPLELDLKPYTSGGQNSDVE 356
K++ + K P V HLKRFK YV ++ +H V +PLEL L G + D +
Sbjct: 288 KRMKIKKAPHVLVIHLKRFK----YVEQLSRHKKLSYRVVYPLELKL-----GSMSEDAD 338
Query: 357 LKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVL----------- 405
+Y L+A+V H+GSSP GHY S I+S + W +D V ++ EE L
Sbjct: 339 CEYSLFAVVVHVGSSPNHGHYVSQIKSHGN-WLSFDDDTV-QISEESTLQTFYGSSREHC 396
Query: 406 ---SQDAYILFYAKQG 418
+ YILFY + G
Sbjct: 397 GGNTDHGYILFYERLG 412
>gi|296082153|emb|CBI21158.3| unnamed protein product [Vitis vinifera]
Length = 529
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/348 (29%), Positives = 171/348 (49%), Gaps = 38/348 (10%)
Query: 101 IKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPC--DGATEGFCVICAL 158
I P G+ GL NLGNTCF+N++LQ H PL S H R +++ C+ C +
Sbjct: 173 IFPLGL-RGLNNLGNTCFMNSVLQALFHAPPLRNYFLSDRHNRQSCRRRSSDRLCLPCDI 231
Query: 159 RDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTK 218
+ SP + + + S Y+Q+DAHEF +LD++ S +
Sbjct: 232 DVIFSAVFSGDRTPYSPARFLYSWWQHSENLASYEQQDAHEFFISMLDQIHVKEGKSGNQ 291
Query: 219 DESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE------------- 265
D+ + I + F G L S + C CG S TY+P +D+SL ++
Sbjct: 292 DKD-NRDCQCIAHKAFSGLLRSDVTCTTCGFTSTTYDPCVDISLNLDMSFCPSTGMTNRT 350
Query: 266 -------DVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHL 318
+ +L L+ FT+ EK+ P+ K C+ C+E+ + KQ+ + ++P V H+
Sbjct: 351 TKPNENAIISTLLGCLDLFTRPEKL-GPDQKLYCQNCQERRNSLKQMSIRRLPIVLCLHI 409
Query: 319 KRFK--TDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGH 376
KRF+ T KID++++FP LD+ PY S ++A+V H G + GH
Sbjct: 410 KRFEHSTIRKMSRKIDQYLQFPFSLDMTPYLSSSI---------VFAVVTHSGMLES-GH 459
Query: 377 YFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEWVSS 424
Y +Y+R + W++ +D+ +T V+E V + Y+++Y ++G + +S
Sbjct: 460 YVTYVRVR-NRWYKCDDAWITEVDEGVVRASQCYLMYYVQKGFYYKAS 506
>gi|67968614|dbj|BAE00666.1| unnamed protein product [Macaca fascicularis]
Length = 435
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 124/365 (33%), Positives = 171/365 (46%), Gaps = 55/365 (15%)
Query: 107 GAGLENLGNTCFINAILQ---------CFTHTLPLVQ------ALRSFDHPRPCDGATEG 151
GL NLGNTCF+NAILQ C+ LP V+ A R H R
Sbjct: 73 ATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRS--QGDNN 130
Query: 152 FCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLE-- 209
++ R + S SP L + I F+ YQQ+DAHEF++ LLD L
Sbjct: 131 VSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE 190
Query: 210 ----------SCCLDSKT----KDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYE 255
S L + ++ + +V +FGG L +++ C CG+ S ++
Sbjct: 191 LQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFD 250
Query: 256 PLIDLSLEIED--------------VGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSV 301
P +DLSL+I V SL L SFT LE++++ E + C KCK++
Sbjct: 251 PFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETEL-YMCHKCKKKQKS 309
Query: 302 EKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE-LDLKPYTSGGQNSDVE-LKY 359
K+ + K+P V HLKRF K+D +VEFPL LD+K Y +NS +E Y
Sbjct: 310 TKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGLESCLY 369
Query: 360 HLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFY----A 415
L A+V H GS GHY +Y + W NDS VT +EE V+ AYILFY A
Sbjct: 370 DLAAVVVHHGSGVGSGHYTAYA-THEGRWFHFNDSTVTLTDEETVVKAKAYILFYVERQA 428
Query: 416 KQGTE 420
K G++
Sbjct: 429 KAGSD 433
>gi|302803594|ref|XP_002983550.1| hypothetical protein SELMODRAFT_118322 [Selaginella moellendorffii]
gi|300148793|gb|EFJ15451.1| hypothetical protein SELMODRAFT_118322 [Selaginella moellendorffii]
Length = 567
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 116/403 (28%), Positives = 186/403 (46%), Gaps = 69/403 (17%)
Query: 103 PTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHI 162
P G+ GL N+G+TCF+N++LQ HT PL H + C+ C + D
Sbjct: 176 PLGL-RGLTNMGSTCFMNSVLQALLHTPPLRSYFLGHRHNKA--ACQSKVCLGCDMDDMF 232
Query: 163 ELSLASSGKVLSP-----RKLVDNLNYISSFFQR------YQQEDAHEFLQCLLDRLESC 211
+ + SP R+ + ++++S++Q Y+Q+DAH+F ++ + +
Sbjct: 233 AAAFSGDRTPYSPAQFLYRRYLFLFSFLNSWWQHAANLAGYEQQDAHDFFISAVEGIHA- 291
Query: 212 CLDSKTKDESLSSQGDN----IVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDV 267
++ L D IV RVF G L S + C CG S +P +D+SL++E
Sbjct: 292 ----NSQQPELRKGNDAECRCIVHRVFFGLLRSDVTCTACGFTSTKNDPCVDISLDLEST 347
Query: 268 G----------SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFH 317
+L L+ FT+ E++ E +F CE C+ + KQ+ + K+P V +FH
Sbjct: 348 ALEKQIYASSSTLLGCLDRFTRPERLSSSE-RFFCESCQSRQEAVKQMSVRKLPVVLSFH 406
Query: 318 LKRFKTDGSYVVKIDKHVEFPLELDLKPYTS---------------------GGQN---- 352
+KRF+ K+D +V+FPL LD+ Y S GG N
Sbjct: 407 VKRFEHSAKNYRKVDTYVQFPLSLDMACYLSSSIARLRHGNRLIFVEGKGELGGDNDSGS 466
Query: 353 SDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYIL 412
+ ++ L+A+V H G GHY +Y+R + W++ +D+ +TRV E V + AY+L
Sbjct: 467 TSPSSEFELFAVVSHSGKLDG-GHYVAYLRLGGE-WYKCDDAWITRVGESVVRATQAYML 524
Query: 413 FYAKQGTEWVSSLLEAESIGMNADISNSSPKSVLDNVENDYTS 455
+Y V L ES + N P VLD + YTS
Sbjct: 525 YY-------VQRTLSDESSTTIPERFNQHPNLVLDE-KIGYTS 559
>gi|308809419|ref|XP_003082019.1| probable ubiquitin carboxyl terminal hydrolase (ISS) [Ostreococcus
tauri]
gi|116060486|emb|CAL55822.1| probable ubiquitin carboxyl terminal hydrolase (ISS) [Ostreococcus
tauri]
Length = 580
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/318 (30%), Positives = 157/318 (49%), Gaps = 13/318 (4%)
Query: 108 AGLENLGNTCFINAILQCFTHTLPLVQA---LRSFDHPRPCDGATEGFCVICALRDHIEL 164
+GL N GNTCF A LQC PL + +F + C T FCV+C H+E
Sbjct: 78 SGLTNGGNTCFAAAALQCLRRATPLTAWFDDVDTFHDAKRC-AETRRFCVVCEYARHLER 136
Query: 165 SLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLD--SKTKDESL 222
+ S S +L +++ ++ F+R +QED+HEF+ LLD + L K L
Sbjct: 137 ARESR-DAHSIGRLTKDISKVAKQFRRGRQEDSHEFITALLDAMHVMFLKDLGGEKKFDL 195
Query: 223 SSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE-DVGSLGSALESFTKLE 281
+Q ++ VFGG + ++C CG S +++ +D+ LE+ + S+ AL E
Sbjct: 196 RTQETTVIYHVFGGYTLGTVKCLECGYVSKSFQSTLDIPLEVTGKITSIEEALRENFCSE 255
Query: 282 KIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLEL 341
++ K+ C KCK V +K + P++ LKR+ T G + KI K+V +P
Sbjct: 256 ELLQGSNKYKCSKCKALVRAKKGTKIHVSPNILTIPLKRYST-GRFS-KITKYVTYPATF 313
Query: 342 DLKPYTSG-GQNSDVELKYHLYAIVEHMG--SSPTCGHYFSYIRSSPDTWHRLNDSRVTR 398
L + S + +Y L+ ++ H +S GHY +Y++ D+W ND+R++
Sbjct: 314 SLVEFMSDDAPYEESAPEYELFGVLVHQDFYASAHAGHYVAYVKLRDDSWVLCNDNRISP 373
Query: 399 VEEEFVLSQDAYILFYAK 416
E+ + Q AYILFY +
Sbjct: 374 SSEKEAMKQKAYILFYER 391
>gi|426379399|ref|XP_004056385.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Gorilla gorilla
gorilla]
Length = 724
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 121/348 (34%), Positives = 164/348 (47%), Gaps = 63/348 (18%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+NAILQ LV+ R +CAL
Sbjct: 402 GLRNLGNTCFMNAILQSLRS---LVEEFRK---------------TLCAL-------WQG 436
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRL------------ESCCLDSK 216
S SP L + I F+ YQQ+DAHEF++ LLD L S L
Sbjct: 437 SQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQEN 496
Query: 217 T----KDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIED------ 266
+ ++ + +V +FGG L +++ C CG+ S ++P +DLSL+I
Sbjct: 497 STLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKR 556
Query: 267 --------VGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHL 318
V SL L SFT LE++++ E + C KCK++ K+ + K+P V HL
Sbjct: 557 SKNQENGPVCSLRDCLRSFTDLEELDETEL-YMCHKCKKKQKSTKKFWIQKLPKVLCLHL 615
Query: 319 KRFKTDGSYVVKIDKHVEFPLE-LDLKPYTSGGQNSDVE-LKYHLYAIVEHMGSSPTCGH 376
KRF K+D +VEFPL LD+K Y +NS E Y L A+V H GS GH
Sbjct: 616 KRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGH 675
Query: 377 YFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFY----AKQGTE 420
Y +Y + W NDS VT +EE V+ AYILFY AK G++
Sbjct: 676 YTAYA-THEGRWFHFNDSTVTLTDEETVVKAKAYILFYVEHQAKAGSD 722
>gi|195058982|ref|XP_001995537.1| GH17708 [Drosophila grimshawi]
gi|193896323|gb|EDV95189.1| GH17708 [Drosophila grimshawi]
Length = 847
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/334 (30%), Positives = 164/334 (49%), Gaps = 35/334 (10%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL N+GNTCF+N+++QC +HT L + LR + P ++ ++ I+ +
Sbjct: 522 GLRNIGNTCFMNSVIQCLSHTTELTRFLRGHN-ASPRSATSKDQQILHEFAKLIQEMWTT 580
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESL------ 222
+ ++P +L + + Y Q+DA EFL+ LD L S L++ K E+L
Sbjct: 581 NVHSVTPMELKRAFSLKHRMYNDYNQQDAQEFLRFFLDSLHS-ALNTGVKGETLNIDDNL 639
Query: 223 -------------SSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVG- 268
+ +++++ +F G L S L+C CG+ S T++P DLS+ +
Sbjct: 640 SDNKKADLTWEWYARHENSLIRDLFVGQLKSTLKCTTCGNTSVTFDPFWDLSVPLPSSSR 699
Query: 269 -SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSY 327
L S L+ F + E++ D + TC KCK + K + + P HLKRF +
Sbjct: 700 CKLESCLDLFIR-EEVLDGDEMPTCSKCKTRRKCTKSFTIQRFPKYLVIHLKRFSE--TR 756
Query: 328 VVKIDKHVEFPL---ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSS 384
K+ VEFP EL++ Y G N++ + Y LYAI HMGS+ GHY + +
Sbjct: 757 WSKLSNIVEFPTADRELNMASY---GANANSNVHYSLYAISNHMGST-AGGHYVAICKHP 812
Query: 385 -PDTWHRLNDSRVT-RVEEEFVLSQDAYILFYAK 416
WH ND+ V+ + E ++S AYILFY +
Sbjct: 813 VSHKWHEFNDNSVSDSIPENCLVSSSAYILFYER 846
>gi|344293060|ref|XP_003418242.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Loxodonta
africana]
Length = 396
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 116/341 (34%), Positives = 161/341 (47%), Gaps = 45/341 (13%)
Query: 108 AGLENLGNTCFINAILQCFTHTLPLVQ------ALRSFDHPRPCDGA-TEGFCVICALRD 160
AGL NLGNTCF+N+ILQC ++T L LR H A E F +
Sbjct: 58 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYLRDLSHSSSAHTALMEEFAKLIQ--- 114
Query: 161 HIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLES----CCLDSK 216
+ +S V+SP + + + F Y Q+DA EFL+ LLD L + + K
Sbjct: 115 --TIWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTVRPK 172
Query: 217 TKDESLS----------------SQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDL 260
+ E+L + D+ + +F G L S L C CG CS ++P DL
Sbjct: 173 SNPENLDRLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTECGYCSTVFDPFWDL 232
Query: 261 SLEIEDVG----SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAF 316
SL I G +L + FTK E + D + K TC +C + K+ + + P +
Sbjct: 233 SLPIAKRGYPEVTLMDCMRLFTK-EDVLDGDEKPTCCRCGARKRCIKKFSIQRFPKILVL 291
Query: 317 HLKRFKTDGSYVVKIDKHVEFPL-ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCG 375
HLKRF K+ V FPL +LDL+ + S N V Y+LYA+ H G++ G
Sbjct: 292 HLKRFSESRIRTSKLTTFVSFPLRDLDLREFASENTNHAV---YNLYAVSNHSGTT-MGG 347
Query: 376 HYFSYIRSSPDT--WHRLNDSRVTRVEEEFVLSQDAYILFY 414
HY +Y R SP T WH NDS VT + V + DAY+LFY
Sbjct: 348 HYTAYCR-SPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLFY 387
>gi|194376096|dbj|BAG62807.1| unnamed protein product [Homo sapiens]
Length = 476
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 124/365 (33%), Positives = 170/365 (46%), Gaps = 55/365 (15%)
Query: 107 GAGLENLGNTCFINAILQ---------CFTHTLPLVQ------ALRSFDHPRPCDGATEG 151
GL NLGNTCF+NAILQ C+ LP V+ A R H R
Sbjct: 114 ATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTR--SQGDNN 171
Query: 152 FCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLE-- 209
++ R + S SP L + I F+ YQQ+DAHEF++ LLD L
Sbjct: 172 VSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE 231
Query: 210 ----------SCCLDSKT----KDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYE 255
S L + ++ + +V +FGG L +++ C CG+ S ++
Sbjct: 232 LQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFD 291
Query: 256 PLIDLSLEIED--------------VGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSV 301
P +DLSL+I V SL L SFT LE++++ E + C KCK++
Sbjct: 292 PFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETEL-YMCHKCKKKQKS 350
Query: 302 EKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE-LDLKPYTSGGQNSDVE-LKY 359
K+ + K+P V HLKRF K+D +VEFPL LD+K Y +NS E Y
Sbjct: 351 TKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPESCLY 410
Query: 360 HLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFY----A 415
L A+V H GS GHY +Y + W NDS VT +EE V+ AYILFY A
Sbjct: 411 DLAAVVVHHGSGVGSGHYIAYA-THEGRWFHFNDSTVTLTDEETVVKAKAYILFYVEHQA 469
Query: 416 KQGTE 420
K G++
Sbjct: 470 KAGSD 474
>gi|444525392|gb|ELV13999.1| Ubiquitin carboxyl-terminal hydrolase 22, partial [Tupaia
chinensis]
Length = 479
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/352 (31%), Positives = 163/352 (46%), Gaps = 56/352 (15%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT PL++ D R C+ + C++C + +
Sbjct: 144 GLINLGNTCFMNCIVQALTHT-PLLRDFFLSDRHR-CEMQSPSSCLVCEMSSLFQ----- 196
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
+L+ + + Y+Q+DAHEFL LD L C D K + + +
Sbjct: 197 --------ELLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHCN 248
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDV---------GSLGSA----- 273
I+ ++F G L S + C C S T +P D+SL++ GS GS
Sbjct: 249 CIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGSVVNGES 308
Query: 274 -----------LESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK 322
L FT+ E + K C KQL + K+P VA FHLKRF+
Sbjct: 309 HVAGTTTLTDCLRRFTRPEHL-GSSAKIKCSGWASYQESTKQLTMKKLPIVACFHLKRFE 367
Query: 323 TDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMG 369
KI +V FPLELD+ P+ + + S + + KY L+A+V H G
Sbjct: 368 HSAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPTDSLNSDNKYSLFAVVNHQG 427
Query: 370 SSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
+ + GHY S+IR D W + +D+ +T+ + VL + Y+LFY KQ E+
Sbjct: 428 TLES-GHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHKQFLEY 478
>gi|410961062|ref|XP_003987104.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Felis catus]
Length = 503
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 128/369 (34%), Positives = 175/369 (47%), Gaps = 56/369 (15%)
Query: 104 TGVGA-GLENLGNTCFINAILQ---------CFTHTLPLVQ------ALRSFDHPRPCDG 147
TG+ A GL NLGNTCF+NAILQ C+ LP V+ A R H R
Sbjct: 137 TGICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTR--SQ 194
Query: 148 ATEGFCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDR 207
++ R + S SP L + I F+ YQQ+DAHEF++ LLD
Sbjct: 195 GDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDH 254
Query: 208 LE-------SCCLDSKTKDESLSSQGDN---------IVQRVFGGCLISKLQCCNCGSCS 251
L + S E+ + G N +V +FGG L +++ C CG+ S
Sbjct: 255 LHLELQGGFNGVSRSAILQENSALSGSNKCCINGASTVVTAIFGGILQNEVNCLICGTES 314
Query: 252 DTYEPLIDLSLEIED--------------VGSLGSALESFTKLEKIEDPETKFTCEKCKE 297
++P +DLSL+I V SL L SFT LE++++ E + C KCK+
Sbjct: 315 RKFDPFLDLSLDIPSQFRNKRSKNQENGPVCSLRDCLRSFTDLEELDETEL-YMCHKCKK 373
Query: 298 QVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE-LDLKPYTSGGQNSDVE 356
+ K+ + K+P V HLKRF K+D +VEFPL LD+K Y +NS E
Sbjct: 374 KQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPE 433
Query: 357 -LKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFY- 414
Y L A+V H GS GHY +Y + W NDS VT +E+ V+ AYILFY
Sbjct: 434 SCLYDLAAVVVHHGSGVGSGHYTAYA-THEGRWFHFNDSTVTLTDEDTVVKAKAYILFYV 492
Query: 415 ---AKQGTE 420
AK G++
Sbjct: 493 ERQAKAGSD 501
>gi|395746828|ref|XP_003778519.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Pongo abelii]
Length = 431
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 124/365 (33%), Positives = 170/365 (46%), Gaps = 55/365 (15%)
Query: 107 GAGLENLGNTCFINAILQ---------CFTHTLPLVQ------ALRSFDHPRPCDGATEG 151
GL NLGNTCF+NAILQ C+ LP V+ A R H R
Sbjct: 69 ATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTR--SQGDNN 126
Query: 152 FCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLE-- 209
++ R + S SP L + I F+ YQQ+DAHEF++ LLD L
Sbjct: 127 VSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE 186
Query: 210 ----------SCCLDSKT----KDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYE 255
S L + ++ + +V +FGG L +++ C CG+ S ++
Sbjct: 187 LQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFD 246
Query: 256 PLIDLSLEIED--------------VGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSV 301
P +DLSL+I V SL L SFT LE++++ E + C KCK++
Sbjct: 247 PFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETEL-YMCHKCKKKQKS 305
Query: 302 EKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE-LDLKPYTSGGQNSDVE-LKY 359
K+ + K+P V HLKRF K+D +VEFPL LD+K Y +NS E Y
Sbjct: 306 TKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPESCLY 365
Query: 360 HLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFY----A 415
L A+V H GS GHY +Y + W NDS VT +EE V+ AYILFY A
Sbjct: 366 DLAAVVVHHGSGVGSGHYTAYA-THEGRWFHFNDSTVTLTDEETVVKAKAYILFYVERQA 424
Query: 416 KQGTE 420
K G++
Sbjct: 425 KAGSD 429
>gi|448106993|ref|XP_004200881.1| Piso0_003491 [Millerozyma farinosa CBS 7064]
gi|448110006|ref|XP_004201512.1| Piso0_003491 [Millerozyma farinosa CBS 7064]
gi|359382303|emb|CCE81140.1| Piso0_003491 [Millerozyma farinosa CBS 7064]
gi|359383068|emb|CCE80375.1| Piso0_003491 [Millerozyma farinosa CBS 7064]
Length = 540
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/336 (31%), Positives = 168/336 (50%), Gaps = 42/336 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFD---HPRPCD----------GATEGFCVI 155
G NLG TC+++ ILQ H PLV+ R F+ H CD + + CV
Sbjct: 212 GFVNLGATCYMSCILQTLVHN-PLVK-YRFFNNDHHYFNCDRNRLYLASGTQSEDTACVT 269
Query: 156 CALRDHI--ELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRL----E 209
CAL DHI + SG+ + + F Q++DAHEF Q +++ L E
Sbjct: 270 CAL-DHIFKSFYVGGSGQGFCMSGFLATAWHKKRSFSGAQEQDAHEFWQFVMNELHHDHE 328
Query: 210 SCCLDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGS 269
C + E+ + + VF G L+S ++C +CGS + +P++DLSLE+E G
Sbjct: 329 RVC-GAPAAPETCTC----VAHSVFAGELVSSIRCESCGSVTAKVDPMLDLSLEVESPGQ 383
Query: 270 ------LGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKT 323
+ L+ FT E + + ++C+ C+++ + K L + + P+V + LKRFK
Sbjct: 384 STTELDVNGCLDMFTSEEPL---DALYSCQHCQQEATAYKTLHMGRCPTVLSIQLKRFKH 440
Query: 324 DGSY--VVKIDKHVEFPLELDLKPYTSGGQNSDVELK---YHLYAIVEHMGSSPTCGHYF 378
+ S KID V P+ LD+ PYT+ +D + Y L+A+V H+GS T GHY
Sbjct: 441 NSSADSFSKIDTPVAAPMFLDMAPYTTSSSRADADASPTTYELFAVVSHIGSFST-GHYV 499
Query: 379 SYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFY 414
I++ W + +DS V+ V V + +AY+LFY
Sbjct: 500 VAIKTPAGQWLKFDDSVVSLVSPSDVAAMNAYLLFY 535
>gi|71030536|ref|XP_764910.1| hypothetical protein [Theileria parva strain Muguga]
gi|68351866|gb|EAN32627.1| hypothetical protein TP02_0344 [Theileria parva]
Length = 671
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 109/332 (32%), Positives = 163/332 (49%), Gaps = 28/332 (8%)
Query: 106 VGAGLENLG-NTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEG-FCVICALRDHIE 163
+GAGL N G N C++N I+Q THT L +L H + C + FC++C ++++
Sbjct: 80 MGAGLNNPGINICYMNVIIQVLTHTPFLASSLLKSYHSKTCSHYEKDIFCIMCLFENYVK 139
Query: 164 LSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRL-ESCCLDS----KTK 218
S S + +P + +I + F+ Q+DA FL+ LD L ++C L+S K +
Sbjct: 140 QSFESPNPLNNPFYSIAK-KFIWARFKLGHQDDAFIFLKHFLDSLSKACYLNSHESEKPE 198
Query: 219 DESLSSQ-------GDNIVQRV----FGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDV 267
DES D I+ V FGG + + C NC S+ E DL++E+
Sbjct: 199 DESEGQSKPKDFISNDQIMSTVIGCLFGGYFRNVIVCNNCSRKSEKVEEFFDLAVEVTKS 258
Query: 268 GSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSY 327
L L F EK+ + + K+ C CK + K L + K P + +LKRF +
Sbjct: 259 NRLIDLLSEFVLPEKLTN-DNKYFCSNCKGYQNANKSLSIYKAPRILNINLKRFNLYSNG 317
Query: 328 VVKIDKHVEFP--LELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSP 385
K K +EFP L + LK ++S L Y LYAIV H+G S GHY ++I+
Sbjct: 318 YKKSLKAIEFPQLLSISLK----SSEDSYTWLNYDLYAIVCHIGKSLHMGHYITFIKGKH 373
Query: 386 DTWHRLNDSRVTRVEEEFVLSQ--DAYILFYA 415
W+R +DS + V E VLS D Y+LFY+
Sbjct: 374 GFWYRFDDSIIQCVSESTVLSHNNDVYLLFYS 405
>gi|195014496|ref|XP_001984029.1| GH16215 [Drosophila grimshawi]
gi|251765096|sp|B4IXE0.1|UBP36_DROGR RecName: Full=Ubiquitin carboxyl-terminal hydrolase 36; AltName:
Full=Deubiquitinating enzyme 36; AltName: Full=Protein
scrawny; AltName: Full=Ubiquitin thioesterase 36;
AltName: Full=Ubiquitin-specific-processing protease 36
gi|193897511|gb|EDV96377.1| GH16215 [Drosophila grimshawi]
Length = 1240
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/329 (30%), Positives = 162/329 (49%), Gaps = 21/329 (6%)
Query: 97 WPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFD-HPRPCD---GATEGF 152
W + VG G+ N+GNTC++N+ LQ H L L S H C+
Sbjct: 191 WKQSERKWQVGTGMLNVGNTCYLNSSLQALFHIPSLANWLVSESAHLENCNISESCGSNG 250
Query: 153 CVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCC 212
C+ICA+ ++ S S+ + P + L I +QEDAHEFL+ L++ +E
Sbjct: 251 CIICAMAKTLQ-STQSNQSAVRPFLIYSKLRQICKHMVVGRQEDAHEFLRFLIEAMEKAY 309
Query: 213 LDSKTKDESLSSQGDNIVQ------RVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIED 266
L + L D +V+ ++FGG L S+++C +C S T++ DL L+I
Sbjct: 310 LMRFRNYKEL----DQLVKETTPLNQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIRK 365
Query: 267 VGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGS 326
+L A + + E++ED + CE CK++VS KQ L++ P LKRF G+
Sbjct: 366 SDTLEDAFDGYFSRERLED--MGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFSMMGN 423
Query: 327 YVVKIDKHVEFPLELDLKPYTSGGQNSDVE-LKYHLYAIVEHMGSSPTCGHYFSYIRSSP 385
K+ K + F +DL + + + + L Y L ++V H+G S CGHY + +
Sbjct: 424 ---KLTKQISFKPRIDLSRFAARSPTAAAQPLSYRLVSMVTHLGVSQHCGHYTAIGLTET 480
Query: 386 DTWHRLNDSRVTRVEEEFVLSQDAYILFY 414
+++ +DS V + + V + +AYI+FY
Sbjct: 481 GSYYNFDDSCVRPIAMQSVCNTNAYIMFY 509
>gi|332235883|ref|XP_003267134.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 2
[Nomascus leucogenys]
Length = 498
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 124/365 (33%), Positives = 170/365 (46%), Gaps = 55/365 (15%)
Query: 107 GAGLENLGNTCFINAILQ---------CFTHTLPLVQ------ALRSFDHPRPCDGATEG 151
GL NLGNTCF+NAILQ C+ LP V+ A R H R
Sbjct: 136 ATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTR--SQGDNN 193
Query: 152 FCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLE-- 209
++ R + S SP L + I F+ YQQ+DAHEF++ LLD L
Sbjct: 194 VSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE 253
Query: 210 ----------SCCLDSKT----KDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYE 255
S L + ++ + +V +FGG L +++ C CG+ S ++
Sbjct: 254 LQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFD 313
Query: 256 PLIDLSLEIED--------------VGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSV 301
P +DLSL+I V SL L SFT LE++++ E + C KCK++
Sbjct: 314 PFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETEL-YMCHKCKKKQKS 372
Query: 302 EKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE-LDLKPYTSGGQNSDVE-LKY 359
K+ + K+P V HLKRF K+D +VEFPL LD+K Y +NS E Y
Sbjct: 373 TKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPESCLY 432
Query: 360 HLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFY----A 415
L A+V H GS GHY +Y + W NDS VT +EE V+ AYILFY A
Sbjct: 433 DLAAVVVHHGSGVGSGHYTAYA-THEGRWFHFNDSTVTLTDEETVVKAKAYILFYVERQA 491
Query: 416 KQGTE 420
K G++
Sbjct: 492 KAGSD 496
>gi|395746826|ref|XP_003778518.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Pongo abelii]
Length = 498
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 124/365 (33%), Positives = 170/365 (46%), Gaps = 55/365 (15%)
Query: 107 GAGLENLGNTCFINAILQ---------CFTHTLPLVQ------ALRSFDHPRPCDGATEG 151
GL NLGNTCF+NAILQ C+ LP V+ A R H R
Sbjct: 136 ATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTR--SQGDNN 193
Query: 152 FCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLE-- 209
++ R + S SP L + I F+ YQQ+DAHEF++ LLD L
Sbjct: 194 VSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE 253
Query: 210 ----------SCCLDSKT----KDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYE 255
S L + ++ + +V +FGG L +++ C CG+ S ++
Sbjct: 254 LQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFD 313
Query: 256 PLIDLSLEIED--------------VGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSV 301
P +DLSL+I V SL L SFT LE++++ E + C KCK++
Sbjct: 314 PFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETEL-YMCHKCKKKQKS 372
Query: 302 EKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE-LDLKPYTSGGQNSDVE-LKY 359
K+ + K+P V HLKRF K+D +VEFPL LD+K Y +NS E Y
Sbjct: 373 TKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPESCLY 432
Query: 360 HLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFY----A 415
L A+V H GS GHY +Y + W NDS VT +EE V+ AYILFY A
Sbjct: 433 DLAAVVVHHGSGVGSGHYTAYA-THEGRWFHFNDSTVTLTDEETVVKAKAYILFYVERQA 491
Query: 416 KQGTE 420
K G++
Sbjct: 492 KAGSD 496
>gi|195568052|ref|XP_002107569.1| GD17542 [Drosophila simulans]
gi|194204979|gb|EDX18555.1| GD17542 [Drosophila simulans]
Length = 398
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/334 (32%), Positives = 164/334 (49%), Gaps = 36/334 (10%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL N+GNTCF+N+++QC +HT L + LRS R +T+ ++ I S
Sbjct: 74 GLRNIGNTCFMNSVIQCLSHTQELTRFLRSHHGSRSL--STKDQQILHEFAKLIHEMWTS 131
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESL------ 222
+ ++P +L + + Y Q+DA EFL+ LD L S L+S K E+L
Sbjct: 132 NVHTVTPMELKRAFSTKHRMYSDYNQQDAQEFLRFFLDSLHS-ALNSGVKGETLNIDDNL 190
Query: 223 -------------SSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVG- 268
+ +++V+ +F G L S L+C CG+ S T++P DLS+ +
Sbjct: 191 SDNKKADLTWEWYTRHENSLVRDLFVGQLKSTLKCTTCGNTSVTFDPFWDLSVPLPSSSR 250
Query: 269 -SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSY 327
L + L+ F + E++ D + TC KCK + K + + P HLKRF +
Sbjct: 251 CKLDACLDLFIR-EEVLDGDEMPTCAKCKTRRKCTKSFTIQRFPKYLVIHLKRFSE--TR 307
Query: 328 VVKIDKHVEFPL---ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSS 384
K+ VEFP EL++ Y G NS+ + Y LYAI HMGS+ GHY + +
Sbjct: 308 WSKLSNIVEFPTSDSELNMGSY---GANSNSNVHYSLYAISNHMGSTAG-GHYVALCKHP 363
Query: 385 PD-TWHRLNDSRVT-RVEEEFVLSQDAYILFYAK 416
WH ND+ V+ + E ++S AYILFY +
Sbjct: 364 VSRKWHEFNDNIVSDALSENHLVSSSAYILFYER 397
>gi|380798287|gb|AFE71019.1| ubiquitin carboxyl-terminal hydrolase 3, partial [Macaca mulatta]
Length = 491
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 124/365 (33%), Positives = 170/365 (46%), Gaps = 55/365 (15%)
Query: 107 GAGLENLGNTCFINAILQ---------CFTHTLPLVQ------ALRSFDHPRPCDGATEG 151
GL NLGNTCF+NAILQ C+ LP V+ A R H R
Sbjct: 129 ATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTR--SQGDNN 186
Query: 152 FCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLE-- 209
++ R + S SP L + I F+ YQQ+DAHEF++ LLD L
Sbjct: 187 VSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE 246
Query: 210 ----------SCCLDSKT----KDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYE 255
S L + ++ + +V +FGG L +++ C CG+ S ++
Sbjct: 247 LQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFD 306
Query: 256 PLIDLSLEIED--------------VGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSV 301
P +DLSL+I V SL L SFT LE++++ E + C KCK++
Sbjct: 307 PFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETEL-YMCHKCKKKQKS 365
Query: 302 EKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE-LDLKPYTSGGQNSDVE-LKY 359
K+ + K+P V HLKRF K+D +VEFPL LD+K Y +NS E Y
Sbjct: 366 TKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPESCLY 425
Query: 360 HLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFY----A 415
L A+V H GS GHY +Y + W NDS VT +EE V+ AYILFY A
Sbjct: 426 DLAAVVVHHGSGVGSGHYTAYA-THEGRWFHFNDSTVTLTDEETVVKAKAYILFYVERQA 484
Query: 416 KQGTE 420
K G++
Sbjct: 485 KAGSD 489
>gi|332235881|ref|XP_003267133.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 1
[Nomascus leucogenys]
Length = 520
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 124/365 (33%), Positives = 170/365 (46%), Gaps = 55/365 (15%)
Query: 107 GAGLENLGNTCFINAILQ---------CFTHTLPLVQ------ALRSFDHPRPCDGATEG 151
GL NLGNTCF+NAILQ C+ LP V+ A R H R
Sbjct: 158 ATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTR--SQGDNN 215
Query: 152 FCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLE-- 209
++ R + S SP L + I F+ YQQ+DAHEF++ LLD L
Sbjct: 216 VSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE 275
Query: 210 ----------SCCLDSKT----KDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYE 255
S L + ++ + +V +FGG L +++ C CG+ S ++
Sbjct: 276 LQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFD 335
Query: 256 PLIDLSLEIED--------------VGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSV 301
P +DLSL+I V SL L SFT LE++++ E + C KCK++
Sbjct: 336 PFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETEL-YMCHKCKKKQKS 394
Query: 302 EKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE-LDLKPYTSGGQNSDVE-LKY 359
K+ + K+P V HLKRF K+D +VEFPL LD+K Y +NS E Y
Sbjct: 395 TKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPESCLY 454
Query: 360 HLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFY----A 415
L A+V H GS GHY +Y + W NDS VT +EE V+ AYILFY A
Sbjct: 455 DLAAVVVHHGSGVGSGHYTAYA-THEGRWFHFNDSTVTLTDEETVVKAKAYILFYVERQA 513
Query: 416 KQGTE 420
K G++
Sbjct: 514 KAGSD 518
>gi|357620428|gb|EHJ72623.1| hypothetical protein KGM_20167 [Danaus plexippus]
Length = 563
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/342 (32%), Positives = 166/342 (48%), Gaps = 38/342 (11%)
Query: 108 AGLENLGNTCFINAILQC------FTHTLPLVQAL------RSFDHPRPCDGATEGFCVI 155
GL+NLGNTCF+NA+LQ F++ + +L R H R V+
Sbjct: 224 VGLKNLGNTCFMNAVLQSLNNIQEFSYYFSQLPSLEMKTNGRKVYHSRSYTRQEMHDVVM 283
Query: 156 CALRDHIELSLASSG----KVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESC 211
+ ++L + G +SP L + + F+ YQQ+DAHEFL+ +LDRL +
Sbjct: 284 AEELRKVLINLNTGGCGSKAAISPECLFLVIWKVVPRFRGYQQQDAHEFLRYMLDRLHTE 343
Query: 212 CLDSKTKDESLSSQG-DNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVG-- 268
L D + +IV VFGG L S+++C CG+ S ++P +DLSLE+ + G
Sbjct: 344 -LQQLVPDRPEGVKAPASIVTAVFGGTLQSEVRCLACGTESKKFDPFLDLSLELPESGRH 402
Query: 269 ----SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTD 324
SL L SF ++E++ D E F C CK + KQ + ++P+V HLKRF+
Sbjct: 403 DAPVSLTDCLASFVQIEELADTERYF-CSSCKCKQKSTKQFWIRRLPNVLCLHLKRFRWH 461
Query: 325 GSYVVKIDKHVEFP-LELDLKPYT--------SGGQNSDVELKYHLYAIVEHMGSSPTCG 375
+ K+D + FP L LD+ + G+ S L Y L A++ H GS G
Sbjct: 462 NYFRTKVDTSISFPLLSLDMSGFVLPNVPDTRRSGRGS---LLYDLAAVIVHHGSGAGSG 518
Query: 376 HYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQ 417
HY ++ + + W ND V + V S YILFY ++
Sbjct: 519 HYTAFA-INEEQWFHFNDQTVRATDSAAVASCKPYILFYIRR 559
>gi|47681481|gb|AAT37507.1| UBP protein [Homo sapiens]
Length = 498
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 124/365 (33%), Positives = 170/365 (46%), Gaps = 55/365 (15%)
Query: 107 GAGLENLGNTCFINAILQ---------CFTHTLPLVQ------ALRSFDHPRPCDGATEG 151
GL NLGNTCF+NAILQ C+ LP V+ A R H R
Sbjct: 136 ATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTR--SQGDNN 193
Query: 152 FCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLE-- 209
++ R + S SP L + I F+ YQQ+DAHEF++ LLD L
Sbjct: 194 VSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE 253
Query: 210 ----------SCCLDSKT----KDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYE 255
S L + ++ + +V +FGG L +++ C CG+ S ++
Sbjct: 254 LQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFD 313
Query: 256 PLIDLSLEIED--------------VGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSV 301
P +DLSL+I V SL L SFT LE++++ E + C KCK++
Sbjct: 314 PFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETEL-YMCHKCKKKQKS 372
Query: 302 EKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE-LDLKPYTSGGQNSDVE-LKY 359
K+ + K+P V HLKRF K+D +VEFPL LD+K Y +NS E Y
Sbjct: 373 TKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPESCLY 432
Query: 360 HLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFY----A 415
L A+V H GS GHY +Y + W NDS VT +EE V+ AYILFY A
Sbjct: 433 DLAAVVVHHGSGVGSGHYTAYA-THEGRWFHFNDSTVTLTDEETVVKAKAYILFYVEHQA 491
Query: 416 KQGTE 420
K G++
Sbjct: 492 KAGSD 496
>gi|297696821|ref|XP_002825578.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 3 [Pongo
abelii]
Length = 520
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 124/365 (33%), Positives = 170/365 (46%), Gaps = 55/365 (15%)
Query: 107 GAGLENLGNTCFINAILQ---------CFTHTLPLVQ------ALRSFDHPRPCDGATEG 151
GL NLGNTCF+NAILQ C+ LP V+ A R H R
Sbjct: 158 ATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTR--SQGDNN 215
Query: 152 FCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLE-- 209
++ R + S SP L + I F+ YQQ+DAHEF++ LLD L
Sbjct: 216 VSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE 275
Query: 210 ----------SCCLDSKT----KDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYE 255
S L + ++ + +V +FGG L +++ C CG+ S ++
Sbjct: 276 LQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFD 335
Query: 256 PLIDLSLEIED--------------VGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSV 301
P +DLSL+I V SL L SFT LE++++ E + C KCK++
Sbjct: 336 PFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETEL-YMCHKCKKKQKS 394
Query: 302 EKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE-LDLKPYTSGGQNSDVE-LKY 359
K+ + K+P V HLKRF K+D +VEFPL LD+K Y +NS E Y
Sbjct: 395 TKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPESCLY 454
Query: 360 HLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFY----A 415
L A+V H GS GHY +Y + W NDS VT +EE V+ AYILFY A
Sbjct: 455 DLAAVVVHHGSGVGSGHYTAYA-THEGRWFHFNDSTVTLTDEETVVKAKAYILFYVERQA 513
Query: 416 KQGTE 420
K G++
Sbjct: 514 KAGSD 518
>gi|307207001|gb|EFN84824.1| Ubiquitin carboxyl-terminal hydrolase 22 [Harpegnathos saltator]
Length = 502
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/346 (30%), Positives = 163/346 (47%), Gaps = 42/346 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDH---PRPCDGATEGFCVICALRDHIELS 165
GL NLG+TCF+N I+Q HT PL++ D P+P C++C + +
Sbjct: 160 GLINLGSTCFMNCIVQALIHT-PLLRDYFLADRHHCPQPTR------CLVCEVSHLFQEF 212
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
+ S L+ KL+ + + Y+Q+DAHEF LD L C + +
Sbjct: 213 YSGSKAPLTLHKLLHLIWTHARHLAGYEQQDAHEFFIATLDVLHRHCEAAPILVKDNPHH 272
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVG------------SLGSA 273
+ I+ ++F G L S + C C S T +P D+SL++ SL
Sbjct: 273 CNCIIDQIFTGGLQSDVVCQACNGVSTTIDPFWDISLDLGPAAGASGSDASGPPTSLLDC 332
Query: 274 LESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDK 333
LE FT+ E + K C C+ KQL + ++P VA+FHLKRF+ KI
Sbjct: 333 LERFTRAEHL-GSTAKIKCSNCQTYQESTKQLTMKQLPIVASFHLKRFEHSSIQDKKIST 391
Query: 334 HVEFPLELDLKPYTS----GGQNSDV--------------ELKYHLYAIVEHMGSSPTCG 375
+ FP +LD+ P+ S G NS + + +Y L+A++ H GS T G
Sbjct: 392 FISFPEQLDMTPFMSHKRNGNNNSAMVDGLSKNGEDMTFSDNRYSLFAVINHEGSLET-G 450
Query: 376 HYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
HY ++IR D W + +D +TR + VL+ + Y+LFY KQ E+
Sbjct: 451 HYTAFIRQQRDQWFKCDDHLITRARLKDVLTSEGYLLFYHKQILEY 496
>gi|297696819|ref|XP_002825577.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 2 [Pongo
abelii]
gi|332235885|ref|XP_003267135.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 3
[Nomascus leucogenys]
Length = 476
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 124/365 (33%), Positives = 170/365 (46%), Gaps = 55/365 (15%)
Query: 107 GAGLENLGNTCFINAILQ---------CFTHTLPLVQ------ALRSFDHPRPCDGATEG 151
GL NLGNTCF+NAILQ C+ LP V+ A R H R
Sbjct: 114 ATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTR--SQGDNN 171
Query: 152 FCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLE-- 209
++ R + S SP L + I F+ YQQ+DAHEF++ LLD L
Sbjct: 172 VSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE 231
Query: 210 ----------SCCLDSKT----KDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYE 255
S L + ++ + +V +FGG L +++ C CG+ S ++
Sbjct: 232 LQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFD 291
Query: 256 PLIDLSLEIED--------------VGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSV 301
P +DLSL+I V SL L SFT LE++++ E + C KCK++
Sbjct: 292 PFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETEL-YMCHKCKKKQKS 350
Query: 302 EKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE-LDLKPYTSGGQNSDVE-LKY 359
K+ + K+P V HLKRF K+D +VEFPL LD+K Y +NS E Y
Sbjct: 351 TKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPESCLY 410
Query: 360 HLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFY----A 415
L A+V H GS GHY +Y + W NDS VT +EE V+ AYILFY A
Sbjct: 411 DLAAVVVHHGSGVGSGHYTAYA-THEGRWFHFNDSTVTLTDEETVVKAKAYILFYVERQA 469
Query: 416 KQGTE 420
K G++
Sbjct: 470 KAGSD 474
>gi|114657520|ref|XP_001173962.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 3 [Pan
troglodytes]
Length = 498
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 124/365 (33%), Positives = 170/365 (46%), Gaps = 55/365 (15%)
Query: 107 GAGLENLGNTCFINAILQ---------CFTHTLPLVQ------ALRSFDHPRPCDGATEG 151
GL NLGNTCF+NAILQ C+ LP V+ A R H R
Sbjct: 136 ATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTR--SQGDNN 193
Query: 152 FCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLE-- 209
++ R + S SP L + I F+ YQQ+DAHEF++ LLD L
Sbjct: 194 VSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE 253
Query: 210 ----------SCCLDSKT----KDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYE 255
S L + ++ + +V +FGG L +++ C CG+ S ++
Sbjct: 254 LQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFD 313
Query: 256 PLIDLSLEIED--------------VGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSV 301
P +DLSL+I V SL L SFT LE++++ E + C KCK++
Sbjct: 314 PFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETEL-YMCHKCKKKQKS 372
Query: 302 EKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE-LDLKPYTSGGQNSDVE-LKY 359
K+ + K+P V HLKRF K+D +VEFPL LD+K Y +NS E Y
Sbjct: 373 TKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPESCLY 432
Query: 360 HLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFY----A 415
L A+V H GS GHY +Y + W NDS VT +EE V+ AYILFY A
Sbjct: 433 DLAAVVVHHGSGVGSGHYTAYA-THEGRWFHFNDSTVTLTDEETVVKAKAYILFYVEHQA 491
Query: 416 KQGTE 420
K G++
Sbjct: 492 KAGSD 496
>gi|9279587|dbj|BAB01045.1| unnamed protein product [Arabidopsis thaliana]
Length = 632
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/344 (30%), Positives = 166/344 (48%), Gaps = 52/344 (15%)
Query: 81 RYNWGSSLLSRPVEKHWPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFD 140
+ +W SLLS Q + G GL NLGNTC++N++LQC T T PL +
Sbjct: 6 QMSWMPSLLS---------QKRRNGPPLGLRNLGNTCYLNSVLQCLTFTPPLANFCLTHK 56
Query: 141 HPRPCDGATEGF----CVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQED 196
H CD +G C C + I SL+ +P K+ L + F+ +QED
Sbjct: 57 HSSHCDTYVDGERKRDCPFCIVEKRIARSLSVDLTTDAPNKISSCLKIFAEHFKLGRQED 116
Query: 197 AHEFLQCLLDRLESCCLDSK----TKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSD 252
AHEFL+ ++D + L K +E + G+++V+ +FGG L S+++C +CG+ S+
Sbjct: 117 AHEFLRYVIDACHNTSLRLKKLRYNGNEPFN--GNSVVKEIFGGALQSQVKCLSCGAESN 174
Query: 253 TYEPLIDLSLEIEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPS 312
+ ++D+SLEI S+ +L+ F + E I D K+ CE C++ V+ KQ+ + + P+
Sbjct: 175 KADEIMDISLEILQSSSVKESLQKFFQSE-ILDGNNKYRCESCEKLVTARKQMSILQAPN 233
Query: 313 VAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSP 372
+ LKRF G + KIDK + F L L + S
Sbjct: 234 ILVIQLKRF--GGIFGGKIDKAISFGEILVLSNFMSKAS--------------------- 270
Query: 373 TCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAK 416
+ S W+ NDS V+ + VLS+ AYILF+++
Sbjct: 271 ---------KDSLGRWYCCNDSFVSLSTLQEVLSEKAYILFFSR 305
>gi|55770886|ref|NP_006528.2| ubiquitin carboxyl-terminal hydrolase 3 isoform 1 [Homo sapiens]
gi|205371844|sp|Q9Y6I4.2|UBP3_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 3; AltName:
Full=Deubiquitinating enzyme 3; AltName: Full=Ubiquitin
thioesterase 3; AltName:
Full=Ubiquitin-specific-processing protease 3
gi|17390251|gb|AAH18113.1| Ubiquitin specific peptidase 3 [Homo sapiens]
gi|30583377|gb|AAP35933.1| ubiquitin specific protease 3 [Homo sapiens]
gi|61359968|gb|AAX41792.1| ubiquitin specific protease 3 [synthetic construct]
gi|61359975|gb|AAX41793.1| ubiquitin specific protease 3 [synthetic construct]
gi|76828049|gb|AAI07138.1| Ubiquitin specific peptidase 3 [Homo sapiens]
gi|76828053|gb|AAI07139.1| Ubiquitin specific peptidase 3 [Homo sapiens]
gi|112180754|gb|AAH65300.1| Ubiquitin specific peptidase 3 [Homo sapiens]
gi|119598057|gb|EAW77651.1| ubiquitin specific peptidase 3 [Homo sapiens]
gi|123980244|gb|ABM81951.1| ubiquitin specific peptidase 3 [synthetic construct]
gi|123995059|gb|ABM85131.1| ubiquitin specific peptidase 3 [synthetic construct]
gi|168277636|dbj|BAG10796.1| ubiquitin carboxyl-terminal hydrolase 3 [synthetic construct]
Length = 520
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 124/365 (33%), Positives = 170/365 (46%), Gaps = 55/365 (15%)
Query: 107 GAGLENLGNTCFINAILQ---------CFTHTLPLVQ------ALRSFDHPRPCDGATEG 151
GL NLGNTCF+NAILQ C+ LP V+ A R H R
Sbjct: 158 ATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTR--SQGDNN 215
Query: 152 FCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLE-- 209
++ R + S SP L + I F+ YQQ+DAHEF++ LLD L
Sbjct: 216 VSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE 275
Query: 210 ----------SCCLDSKT----KDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYE 255
S L + ++ + +V +FGG L +++ C CG+ S ++
Sbjct: 276 LQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFD 335
Query: 256 PLIDLSLEIED--------------VGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSV 301
P +DLSL+I V SL L SFT LE++++ E + C KCK++
Sbjct: 336 PFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETEL-YMCHKCKKKQKS 394
Query: 302 EKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE-LDLKPYTSGGQNSDVE-LKY 359
K+ + K+P V HLKRF K+D +VEFPL LD+K Y +NS E Y
Sbjct: 395 TKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPESCLY 454
Query: 360 HLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFY----A 415
L A+V H GS GHY +Y + W NDS VT +EE V+ AYILFY A
Sbjct: 455 DLAAVVVHHGSGVGSGHYTAYA-THEGRWFHFNDSTVTLTDEETVVKAKAYILFYVEHQA 513
Query: 416 KQGTE 420
K G++
Sbjct: 514 KAGSD 518
>gi|388453361|ref|NP_001252999.1| ubiquitin carboxyl-terminal hydrolase 3 [Macaca mulatta]
gi|383423389|gb|AFH34908.1| ubiquitin carboxyl-terminal hydrolase 3 [Macaca mulatta]
gi|384939762|gb|AFI33486.1| ubiquitin carboxyl-terminal hydrolase 3 [Macaca mulatta]
Length = 520
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 124/365 (33%), Positives = 170/365 (46%), Gaps = 55/365 (15%)
Query: 107 GAGLENLGNTCFINAILQ---------CFTHTLPLVQ------ALRSFDHPRPCDGATEG 151
GL NLGNTCF+NAILQ C+ LP V+ A R H R
Sbjct: 158 ATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTR--SQGDNN 215
Query: 152 FCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLE-- 209
++ R + S SP L + I F+ YQQ+DAHEF++ LLD L
Sbjct: 216 VSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE 275
Query: 210 ----------SCCLDSKT----KDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYE 255
S L + ++ + +V +FGG L +++ C CG+ S ++
Sbjct: 276 LQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFD 335
Query: 256 PLIDLSLEIED--------------VGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSV 301
P +DLSL+I V SL L SFT LE++++ E + C KCK++
Sbjct: 336 PFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETEL-YMCHKCKKKQKS 394
Query: 302 EKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE-LDLKPYTSGGQNSDVE-LKY 359
K+ + K+P V HLKRF K+D +VEFPL LD+K Y +NS E Y
Sbjct: 395 TKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPESCLY 454
Query: 360 HLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFY----A 415
L A+V H GS GHY +Y + W NDS VT +EE V+ AYILFY A
Sbjct: 455 DLAAVVVHHGSGVGSGHYTAYA-THEGRWFHFNDSTVTLTDEETVVKAKAYILFYVERQA 513
Query: 416 KQGTE 420
K G++
Sbjct: 514 KAGSD 518
>gi|194763591|ref|XP_001963916.1| GF21001 [Drosophila ananassae]
gi|190618841|gb|EDV34365.1| GF21001 [Drosophila ananassae]
Length = 1296
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/334 (32%), Positives = 165/334 (49%), Gaps = 36/334 (10%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL N+GNTCF+N+++QC +HT L + LRS +T+ ++ I+ S
Sbjct: 972 GLRNIGNTCFMNSVIQCLSHTQELTRFLRSHH--GSRSSSTKDQQILHEFAKLIQEMWTS 1029
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESL------ 222
+ ++P +L + + Y Q+DA EFL+ LD L S L+S K E+L
Sbjct: 1030 NVHTVTPMELKRAFSTKHRMYSDYNQQDAQEFLRFFLDSLHS-ALNSGVKGETLNIDDNL 1088
Query: 223 -------------SSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVG- 268
+ +++V+ +F G L S L+C CG+ S T++P DLS+ +
Sbjct: 1089 SDNKKADLTWEWYTRHENSLVRDLFVGQLKSTLKCTTCGNTSVTFDPFWDLSVPLPSSSR 1148
Query: 269 -SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSY 327
L + L+ F + E++ D + TC KCK + K + + P HLKRF +
Sbjct: 1149 CKLEACLDLFIR-EEVLDGDEMPTCAKCKTRRKCTKSFTIQRFPKYLVIHLKRFSE--TR 1205
Query: 328 VVKIDKHVEFPL---ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSS 384
K+ VEFP EL++ Y G NS+ + Y LYAI HMGS+ GHY + +
Sbjct: 1206 WSKLSNIVEFPTMDRELNMGSY---GANSNSNVHYSLYAISNHMGST-AGGHYVALCKHP 1261
Query: 385 -PDTWHRLNDSRVT-RVEEEFVLSQDAYILFYAK 416
WH ND+ V+ + E F++S AYILFY +
Sbjct: 1262 VSRKWHEFNDNIVSDALSENFLVSSSAYILFYER 1295
>gi|195621226|gb|ACG32443.1| ubiquitin carboxyl-terminal hydrolase 4 [Zea mays]
Length = 417
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 173/350 (49%), Gaps = 53/350 (15%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLV-QALRSFDHPRPCDGATEGFCVICALRDHIELSLA 167
GLEN GNTC+ N++LQ + P Q L + R + A E ++ L D A
Sbjct: 68 GLENFGNTCYCNSVLQALYYCAPFREQLLEYYSKNRNLEDAEEN--LLTCLADLFSQISA 125
Query: 168 SSGK--VLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRL-------ESCCLDS--K 216
S K V++P++ + + ++ +F+ Y +DAHEFL LL+ + SC DS
Sbjct: 126 SKKKTAVIAPKRFIQMVRKLNEYFRGYMHQDAHEFLNFLLNEIVDILEKESSCAKDSPGT 185
Query: 217 TKDESLSSQG--DNI--------VQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIED 266
T E++S+ D + V + F G L ++ +C C + + E DLS++IE
Sbjct: 186 TSSENVSNGAAVDGVRKEPLVTWVHKNFQGILTNETRCLMCETITAKDETFFDLSVDIEQ 245
Query: 267 VGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGS 326
SL S L++F E + + + KF C+KC EK++ + K P + HLKRFK
Sbjct: 246 NSSLTSCLKNFFSTETL-NADDKFFCDKCCSLQEAEKRMKIKKAPQILVIHLKRFK---- 300
Query: 327 YVVKIDKH------VEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSY 380
++ ++++H V +PLEL L ++D + +Y L+A+V H+GS P GHY +
Sbjct: 301 FIEQLNRHKKLSYRVVYPLELKLSS-----NSADADCEYSLFAVVVHLGSGPNQGHYVAM 355
Query: 381 IRSSPDTWHRLNDSRVTRVEE-----------EFVLSQD-AYILFYAKQG 418
I+S D W +D V + E E+ + D YILFY + G
Sbjct: 356 IKSH-DHWLSFDDDNVEMIPESTLQTFYGSSREYSGNTDHGYILFYGRIG 404
>gi|410212190|gb|JAA03314.1| ubiquitin specific peptidase 3 [Pan troglodytes]
gi|410255768|gb|JAA15851.1| ubiquitin specific peptidase 3 [Pan troglodytes]
gi|410292238|gb|JAA24719.1| ubiquitin specific peptidase 3 [Pan troglodytes]
gi|410334293|gb|JAA36093.1| ubiquitin specific peptidase 3 [Pan troglodytes]
Length = 520
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 124/365 (33%), Positives = 170/365 (46%), Gaps = 55/365 (15%)
Query: 107 GAGLENLGNTCFINAILQ---------CFTHTLPLVQ------ALRSFDHPRPCDGATEG 151
GL NLGNTCF+NAILQ C+ LP V+ A R H R
Sbjct: 158 ATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTR--SQGDNN 215
Query: 152 FCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLE-- 209
++ R + S SP L + I F+ YQQ+DAHEF++ LLD L
Sbjct: 216 VSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE 275
Query: 210 ----------SCCLDSKT----KDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYE 255
S L + ++ + +V +FGG L +++ C CG+ S ++
Sbjct: 276 LQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFD 335
Query: 256 PLIDLSLEIED--------------VGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSV 301
P +DLSL+I V SL L SFT LE++++ E + C KCK++
Sbjct: 336 PFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETEL-YMCHKCKKKQKS 394
Query: 302 EKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE-LDLKPYTSGGQNSDVE-LKY 359
K+ + K+P V HLKRF K+D +VEFPL LD+K Y +NS E Y
Sbjct: 395 TKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPESCLY 454
Query: 360 HLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFY----A 415
L A+V H GS GHY +Y + W NDS VT +EE V+ AYILFY A
Sbjct: 455 DLAAVVVHHGSGVGSGHYTAYA-THEGRWFHFNDSTVTLTDEETVVKAKAYILFYVEHQA 513
Query: 416 KQGTE 420
K G++
Sbjct: 514 KAGSD 518
>gi|344293364|ref|XP_003418393.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Loxodonta
africana]
Length = 520
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 124/365 (33%), Positives = 170/365 (46%), Gaps = 55/365 (15%)
Query: 107 GAGLENLGNTCFINAILQ---------CFTHTLPLVQ------ALRSFDHPRPCDGATEG 151
GL NLGNTCF+NAILQ C+ LP V+ A R H R
Sbjct: 158 ATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTR--SQGDNN 215
Query: 152 FCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLE-- 209
++ R + S SP L + I F+ YQQ+DAHEF++ LLD L
Sbjct: 216 VSLVEEFRKTLCALWQGSPTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE 275
Query: 210 ----------SCCLDSKT----KDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYE 255
S L + ++ + +V +FGG L +++ C CG+ S ++
Sbjct: 276 LQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGVLQNEVNCLICGTESRKFD 335
Query: 256 PLIDLSLEIED--------------VGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSV 301
P +DLSL+I V SL L SFT LE++++ E + C KCK++
Sbjct: 336 PFLDLSLDIPSQFRNKRSKNQENGPVCSLRDCLRSFTDLEELDETEL-YMCHKCKKKQKS 394
Query: 302 EKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE-LDLKPYTSGGQNSDVE-LKY 359
K+ + K+P V HLKRF K+D +VEFPL LD+K Y +NS E Y
Sbjct: 395 TKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPENCLY 454
Query: 360 HLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFY----A 415
L A+V H GS GHY ++ + W NDS VT +EE VL AYILFY A
Sbjct: 455 DLAAVVVHHGSGVGSGHYTAFA-THEGRWFHFNDSTVTLTDEETVLKAKAYILFYVERQA 513
Query: 416 KQGTE 420
K G++
Sbjct: 514 KAGSD 518
>gi|90075368|dbj|BAE87364.1| unnamed protein product [Macaca fascicularis]
Length = 431
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 124/365 (33%), Positives = 170/365 (46%), Gaps = 55/365 (15%)
Query: 107 GAGLENLGNTCFINAILQ---------CFTHTLPLVQ------ALRSFDHPRPCDGATEG 151
GL NLGNTCF+NAILQ C+ LP V+ A R H R
Sbjct: 69 ATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTR--SQGDNN 126
Query: 152 FCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLE-- 209
++ R + S SP L + I F+ YQQ+DAHEF++ LLD L
Sbjct: 127 VSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE 186
Query: 210 ----------SCCLDSKT----KDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYE 255
S L + ++ + +V +FGG L +++ C CG+ S ++
Sbjct: 187 LQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFD 246
Query: 256 PLIDLSLEIED--------------VGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSV 301
P +DLSL+I V SL L SFT LE++++ E + C KCK++
Sbjct: 247 PFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETEL-YMCHKCKKKQKS 305
Query: 302 EKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE-LDLKPYTSGGQNSDVE-LKY 359
K+ + K+P V HLKRF K+D +VEFPL LD+K Y +NS E Y
Sbjct: 306 TKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPESCLY 365
Query: 360 HLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFY----A 415
L A+V H GS GHY +Y + W NDS VT +EE V+ AYILFY A
Sbjct: 366 DLAAVVVHHGSGVGSGHYTAYA-THEGRWFHFNDSTVTLTDEETVVKAKAYILFYVERQA 424
Query: 416 KQGTE 420
K G++
Sbjct: 425 KAGSD 429
>gi|355692783|gb|EHH27386.1| Ubiquitin carboxyl-terminal hydrolase 3, partial [Macaca mulatta]
gi|355778099|gb|EHH63135.1| Ubiquitin carboxyl-terminal hydrolase 3, partial [Macaca
fascicularis]
Length = 490
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 124/365 (33%), Positives = 170/365 (46%), Gaps = 55/365 (15%)
Query: 107 GAGLENLGNTCFINAILQ---------CFTHTLPLVQ------ALRSFDHPRPCDGATEG 151
GL NLGNTCF+NAILQ C+ LP V+ A R H R
Sbjct: 128 ATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTR--SQGDNN 185
Query: 152 FCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLE-- 209
++ R + S SP L + I F+ YQQ+DAHEF++ LLD L
Sbjct: 186 VSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE 245
Query: 210 ----------SCCLDSKT----KDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYE 255
S L + ++ + +V +FGG L +++ C CG+ S ++
Sbjct: 246 LQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFD 305
Query: 256 PLIDLSLEIED--------------VGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSV 301
P +DLSL+I V SL L SFT LE++++ E + C KCK++
Sbjct: 306 PFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETEL-YMCHKCKKKQKS 364
Query: 302 EKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE-LDLKPYTSGGQNSDVE-LKY 359
K+ + K+P V HLKRF K+D +VEFPL LD+K Y +NS E Y
Sbjct: 365 TKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPESCLY 424
Query: 360 HLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFY----A 415
L A+V H GS GHY +Y + W NDS VT +EE V+ AYILFY A
Sbjct: 425 DLAAVVVHHGSGVGSGHYTAYA-THEGRWFHFNDSTVTLTDEETVVKAKAYILFYVERQA 483
Query: 416 KQGTE 420
K G++
Sbjct: 484 KAGSD 488
>gi|224143342|ref|XP_002324922.1| predicted protein [Populus trichocarpa]
gi|222866356|gb|EEF03487.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 104/373 (27%), Positives = 178/373 (47%), Gaps = 57/373 (15%)
Query: 87 SLLSRPVEKHWPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDH-PRPC 145
S++ R + +P+ ++ GL NLG+TCF+N++LQ H P S H P C
Sbjct: 92 SMMDRRAKSCYPLGLR------GLNNLGSTCFMNSVLQALLHAPPFRNYFLSERHDPETC 145
Query: 146 DG-ATEGFCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCL 204
+++ C+ C + SP + + + S+ Y+Q+DAHEF +
Sbjct: 146 KKRSSDQLCLACDFGVIFSAVYSGDRTPYSPAQFLYSWWQHSANLASYEQQDAHEFFISV 205
Query: 205 LDRLESCCLDSKTKDESLSSQGDN-----IVQRVFGGCLISKLQCCNCGSCSDTYEPLID 259
LD + + + + SS DN I RVF G L S + C CG S TY+P +D
Sbjct: 206 LDGIH------EREGKERSSNKDNGGCQCIAHRVFSGMLRSDVTCTTCGFTSTTYDPCVD 259
Query: 260 LSLEI----------------EDVG--SLGSALESFTKLEKIEDPETKFTCEKCKEQVSV 301
+SL + ED G +L + L+ FT+ E++ + K C+ C+E+
Sbjct: 260 ISLNMDTTNFSTVNVANKSVREDTGRSTLLACLDLFTRPERL-GSDQKLYCQNCQEKRDS 318
Query: 302 EKQLMLDKVPSVAAFHLKRFKTDG--SYVVKIDKHVEFPLELDLKPYTSG---------- 349
KQ+ + ++P V + H+KRF+ KID +++FP LD+ PY S
Sbjct: 319 LKQMSIKRLPLVLSLHIKRFEHSSLRRSSRKIDWYLQFPFSLDMTPYLSPSIVRNRFGNR 378
Query: 350 -----GQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFV 404
D+ ++ ++A+V H G + GHY +Y+R + W++ +D+ +T V+E V
Sbjct: 379 VFGFESDKPDISSEFEIFAVVTHSGMLDS-GHYVTYLRLQ-NQWYKCDDAWITEVDERIV 436
Query: 405 LSQDAYILFYAKQ 417
+ Y++FY ++
Sbjct: 437 RAAQCYMIFYVQK 449
>gi|375493565|ref|NP_001243631.1| ubiquitin carboxyl-terminal hydrolase 3 isoform 2 [Homo sapiens]
Length = 476
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 124/365 (33%), Positives = 170/365 (46%), Gaps = 55/365 (15%)
Query: 107 GAGLENLGNTCFINAILQ---------CFTHTLPLVQ------ALRSFDHPRPCDGATEG 151
GL NLGNTCF+NAILQ C+ LP V+ A R H R
Sbjct: 114 ATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTR--SQGDNN 171
Query: 152 FCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLE-- 209
++ R + S SP L + I F+ YQQ+DAHEF++ LLD L
Sbjct: 172 VSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE 231
Query: 210 ----------SCCLDSKT----KDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYE 255
S L + ++ + +V +FGG L +++ C CG+ S ++
Sbjct: 232 LQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFD 291
Query: 256 PLIDLSLEIED--------------VGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSV 301
P +DLSL+I V SL L SFT LE++++ E + C KCK++
Sbjct: 292 PFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETEL-YMCHKCKKKQKS 350
Query: 302 EKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE-LDLKPYTSGGQNSDVE-LKY 359
K+ + K+P V HLKRF K+D +VEFPL LD+K Y +NS E Y
Sbjct: 351 TKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPESCLY 410
Query: 360 HLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFY----A 415
L A+V H GS GHY +Y + W NDS VT +EE V+ AYILFY A
Sbjct: 411 DLAAVVVHHGSGVGSGHYTAYA-THEGRWFHFNDSTVTLTDEETVVKAKAYILFYVEHQA 469
Query: 416 KQGTE 420
K G++
Sbjct: 470 KAGSD 474
>gi|296213409|ref|XP_002753258.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 1
[Callithrix jacchus]
Length = 520
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 124/365 (33%), Positives = 170/365 (46%), Gaps = 55/365 (15%)
Query: 107 GAGLENLGNTCFINAILQ---------CFTHTLPLVQ------ALRSFDHPRPCDGATEG 151
GL NLGNTCF+NAILQ C+ LP V+ A R H R
Sbjct: 158 ATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTR--SQGDSN 215
Query: 152 FCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLE-- 209
++ R + S SP L + I F+ YQQ+DAHEF++ LLD L
Sbjct: 216 VSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE 275
Query: 210 ----------SCCLDSKT----KDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYE 255
S L + ++ + +V +FGG L +++ C CG+ S ++
Sbjct: 276 LQGGFNGVSRSAILQENSTLFASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFD 335
Query: 256 PLIDLSLEIED--------------VGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSV 301
P +DLSL+I V SL L SFT LE++++ E + C KCK++
Sbjct: 336 PFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETEL-YMCHKCKKKQKS 394
Query: 302 EKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE-LDLKPYTSGGQNSDVE-LKY 359
K+ + K+P V HLKRF K+D +VEFPL LD+K Y +NS E Y
Sbjct: 395 TKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPESCLY 454
Query: 360 HLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFY----A 415
L A+V H GS GHY +Y + W NDS VT +EE V+ AYILFY A
Sbjct: 455 DLAAVVVHHGSGVGSGHYTAYA-AHEGRWFHFNDSTVTVTDEETVVKAKAYILFYVERQA 513
Query: 416 KQGTE 420
K G++
Sbjct: 514 KAGSD 518
>gi|291413016|ref|XP_002722763.1| PREDICTED: ubiquitin specific peptidase 2 [Oryctolagus cuniculus]
Length = 607
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 119/338 (35%), Positives = 160/338 (47%), Gaps = 39/338 (11%)
Query: 108 AGLENLGNTCFINAILQCFTHTLPL----VQALRSFDHPRPCDGATEGFCVICALRDHIE 163
AGL NLGNTCF+N+ILQC ++T L +Q L D + T L I
Sbjct: 269 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHSSNAHTALMEEFAKLIQTIW 328
Query: 164 LSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCC----------- 212
S S V+SP + + + F Y Q+DA EFL+ LLD L +
Sbjct: 329 TS--SPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTARPKSNP 386
Query: 213 --LDSKTKDESLSSQGDNIVQR-------VFGGCLISKLQCCNCGSCSDTYEPLIDLSLE 263
LD DE ++R +F G L S L C +CG CS ++P DLSL
Sbjct: 387 ENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLP 446
Query: 264 IEDVG----SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLK 319
I G +L + FTK E + D E K TC +C+ + K+ + + P + HLK
Sbjct: 447 IAKRGYPEVTLMDCMRLFTK-EDVLDGEEKPTCCRCRARKRCIKKFSIQRFPKILVLHLK 505
Query: 320 RFKTDGSYVVKIDKHVEFPL-ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYF 378
RF K+ V FPL +LDL+ + S N V Y+LYA+ H G++ GHY
Sbjct: 506 RFSESRIRTSKLTTFVNFPLRDLDLREFASENTNHAV---YNLYAVSNHSGTT-MGGHYT 561
Query: 379 SYIRSSPDT--WHRLNDSRVTRVEEEFVLSQDAYILFY 414
+Y R SP T WH NDS VT + V + DAY+LFY
Sbjct: 562 AYCR-SPATGEWHTFNDSSVTAMSSSQVRTSDAYLLFY 598
>gi|67478714|ref|XP_654739.1| ubiquitin carboxyl-terminal hydrolase family protein [Entamoeba
histolytica HM-1:IMSS]
gi|56471811|gb|EAL49353.1| ubiquitin carboxyl-terminal hydrolase family protein [Entamoeba
histolytica HM-1:IMSS]
gi|449702725|gb|EMD43311.1| ubiquitin carboxylterminal hydrolase family protein [Entamoeba
histolytica KU27]
Length = 584
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 101/313 (32%), Positives = 145/313 (46%), Gaps = 30/313 (9%)
Query: 105 GVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIEL 164
G G N + C++ ++LQ THT P + D L ++
Sbjct: 63 NAGRGYFNAHSNCYMISVLQVLTHTAPFYNYMTQ--QKIKVDD-----IFFKELERIMKE 115
Query: 165 SLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRL-ESCCLDSKTKDESLS 223
+ + + L P NL +SS QRYQQEDA EF LLD L E+ K K ++S
Sbjct: 116 AFEKNNQPLKPIVFEKNLKKLSSSLQRYQQEDATEFYLLLLDHLHEAIIGKGKNKISAIS 175
Query: 224 SQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKI 283
S +F L+S++ C NC +D E L +EI +L S + F K E I
Sbjct: 176 S--------IFHVELVSRITCYNCTRFNDHDEHFSVLPIEITKQKTLESGFDQFFKKEMI 227
Query: 284 EDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDL 343
+ + CEKC + +V K ++P + LKRF D KI+ V FPL+L++
Sbjct: 228 ----SHYHCEKCNTKSNVSKYYFFKRLPWILPIQLKRFTWDEK---KINGKVAFPLQLNI 280
Query: 344 KPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
Y G Y LYAIV H+G + GHY SY ++ W R +D V V +
Sbjct: 281 SKYGMDGL-------YDLYAIVVHLGKTKFSGHYISYCKTPSGGWFRFDDEEVKPVSIKV 333
Query: 404 VLSQDAYILFYAK 416
VL ++AY+LFY+K
Sbjct: 334 VLQEEAYMLFYSK 346
>gi|126277020|ref|XP_001366252.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Monodelphis
domestica]
Length = 520
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 126/368 (34%), Positives = 172/368 (46%), Gaps = 61/368 (16%)
Query: 107 GAGLENLGNTCFINAILQ---------CFTHTLPLVQ------ALRSFDHPRPCDGATEG 151
GL NLGNTCF+NAILQ C+ LP V+ A R H R
Sbjct: 158 ATGLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRTYHTR--SQGDNN 215
Query: 152 FCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLE-- 209
++ R + S SP L + I F+ YQQ+DAHEF++ LLD L
Sbjct: 216 VSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE 275
Query: 210 ----------SCCLDSKTKDESLSSQ-------GDNIVQRVFGGCLISKLQCCNCGSCSD 252
S L ++ SLS+ +V +FGG L +++ C CG+ S
Sbjct: 276 LQGGFNGVSRSVILQ---ENSSLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESR 332
Query: 253 TYEPLIDLSLEIED--------------VGSLGSALESFTKLEKIEDPETKFTCEKCKEQ 298
++P +DLSL+I + SL L SFT LE++++ E + C KCK++
Sbjct: 333 KFDPFLDLSLDIPSQFRNKRSKNQENGPLCSLRDCLRSFTDLEELDETEL-YMCHKCKKK 391
Query: 299 VSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE-LDLKPYTSGGQNSDVE- 356
K+ + K+P V HLKRF K+D +VEFPL LD+K Y +NS E
Sbjct: 392 QKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPES 451
Query: 357 LKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFY-- 414
Y L A+V H GS GHY +Y + W NDS VT +EE V+ AYILFY
Sbjct: 452 CLYDLAAVVVHHGSGVGSGHYTAYA-THEGRWFHFNDSTVTLTDEETVVKAKAYILFYVE 510
Query: 415 --AKQGTE 420
A+ G+E
Sbjct: 511 RQARSGSE 518
>gi|195130331|ref|XP_002009605.1| GI15450 [Drosophila mojavensis]
gi|193908055|gb|EDW06922.1| GI15450 [Drosophila mojavensis]
Length = 1158
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 102/334 (30%), Positives = 164/334 (49%), Gaps = 35/334 (10%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL N+GNTCF+N+++QC +HT L + LR+ H ++ ++ I+ S
Sbjct: 833 GLRNIGNTCFMNSVIQCLSHTTELTRFLRAH-HTNTRTATSKDQQILYEFAKLIQEMWTS 891
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESL------ 222
+ ++P +L + + Y Q+DA EFL+ LD L S L++ K E+L
Sbjct: 892 NVHSVTPMELKRAFSTKHRMYSDYNQQDAQEFLRFFLDSLHS-ALNTGVKGETLNIDDNL 950
Query: 223 -------------SSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVG- 268
+ +++++ +F G L S L+C CG+ S T++P DLS+ +
Sbjct: 951 SDNKKADLTWEWYARHENSLIRDLFVGQLKSTLKCTTCGNTSVTFDPFWDLSVPLPSSSR 1010
Query: 269 -SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSY 327
L + L+ F + E++ D + TC KCK + K + + P HLKRF +
Sbjct: 1011 CKLEACLDLFIR-EEVLDGDEMPTCSKCKTRRKCTKSFTIQRFPKYLVIHLKRFSE--TR 1067
Query: 328 VVKIDKHVEFPL---ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSS 384
K+ VEFP EL++ Y G N++ + Y LYAI HMGS+ GHY + +
Sbjct: 1068 WSKLSNIVEFPTADRELNMASY---GANANSNVHYSLYAISNHMGST-AGGHYVAICKHP 1123
Query: 385 -PDTWHRLNDSRVT-RVEEEFVLSQDAYILFYAK 416
WH ND+ V+ + E ++S AYILFY +
Sbjct: 1124 VSRKWHEFNDNSVSDAIPENCLVSSSAYILFYER 1157
>gi|388454150|ref|NP_001252825.1| ubiquitin carboxyl-terminal hydrolase 2 [Macaca mulatta]
gi|355567137|gb|EHH23516.1| hypothetical protein EGK_06991 [Macaca mulatta]
gi|355752713|gb|EHH56833.1| hypothetical protein EGM_06315 [Macaca fascicularis]
gi|380789853|gb|AFE66802.1| ubiquitin carboxyl-terminal hydrolase 2 isoform a [Macaca mulatta]
Length = 605
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 118/338 (34%), Positives = 163/338 (48%), Gaps = 39/338 (11%)
Query: 108 AGLENLGNTCFINAILQCFTHTLPL----VQALRSFDHPRPCDGATEGFCVICALRDHIE 163
AGL NLGNTCF+N+ILQC ++T L +Q L D + T L I
Sbjct: 267 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHSSNAHTALMEEFAKLIQTIW 326
Query: 164 LSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLES----CCLDSKTKD 219
S S V+SP + + + F Y Q+DA EFL+ LLD L + L K+
Sbjct: 327 TS--SPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNP 384
Query: 220 ESLS----------------SQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE 263
E+L + D+ + +F G L S L C +CG CS ++P DLSL
Sbjct: 385 ENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLP 444
Query: 264 IEDVG----SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLK 319
I G +L + FTK E + D + K TC +C+ + K+ + + P + HLK
Sbjct: 445 IAKRGYPEVTLMDCMRLFTK-EDVLDGDEKPTCCRCRGRKRCIKKFSIQRFPKILVLHLK 503
Query: 320 RFKTDGSYVVKIDKHVEFPL-ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYF 378
RF K+ V FPL +LDL+ + S N V Y+LYA+ H G++ GHY
Sbjct: 504 RFSESRIRTSKLTTFVNFPLRDLDLREFASENTNHAV---YNLYAVSNHSGTT-MGGHYT 559
Query: 379 SYIRSSPDT--WHRLNDSRVTRVEEEFVLSQDAYILFY 414
+Y R SP T WH NDS VT + V + DAY+LFY
Sbjct: 560 AYCR-SPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLFY 596
>gi|400261275|pdb|4FIP|A Chain A, Structure Of The Saga Ubp8(S144n)SGF11(1-72,
Delta-Znf)SUS1SGF73 Dub Module
gi|400261279|pdb|4FIP|E Chain E, Structure Of The Saga Ubp8(S144n)SGF11(1-72,
Delta-Znf)SUS1SGF73 Dub Module
gi|400261291|pdb|4FK5|A Chain A, Structure Of The Saga Ubp8(S144n)SGF11SUS1SGF73 DUB MODULE
Length = 476
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 116/335 (34%), Positives = 172/335 (51%), Gaps = 32/335 (9%)
Query: 108 AGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSL- 166
+GL N+GNTCF+++ILQC H ++ S H C + C CAL D I L
Sbjct: 142 SGLINMGNTCFMSSILQCLIHNPYFIRHSMSQIHSNNCKVRSPDKCFSCAL-DKIVHELY 200
Query: 167 -------ASSGKVLSPRK-----LVDNLNYISSFFQRYQQEDAHEFLQCLLDRL-ESCCL 213
ASS + R+ L+ I+ Y Q+DAHEF Q +++++ +S L
Sbjct: 201 GALNTKQASSSSTSTNRQTGFIYLLTCAWKINQNLAGYSQQDAHEFWQFIINQIHQSYVL 260
Query: 214 D---SKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDT-YEPLIDLSLEIEDVGS 269
D +K + + Q + IV VF G L S + C C + S T +P +DLSL+I+D
Sbjct: 261 DLPNAKEVSRANNKQCECIVHTVFEGSLESSIVCPGCQNNSKTTIDPFLDLSLDIKDKKK 320
Query: 270 LGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK--TDGSY 327
L L+SF K E+++D + C +C KQL + K+PSV LKRF+ +GS
Sbjct: 321 LYECLDSFHKKEQLKD--FNYHCGECNSTQDAIKQLGIHKLPSVLVLQLKRFEHLLNGSN 378
Query: 328 VVKIDKHVEFPLELDLKPYTSG------GQNSDV-ELKYHLYAIVEHMGSSPTCGHYFSY 380
K+D +EFP L++K Y S +N V ++ Y L IV H G+ GHY ++
Sbjct: 379 R-KLDDFIEFPTYLNMKNYCSTKEKDKHSENGKVPDIIYELIGIVSHKGTVNE-GHYIAF 436
Query: 381 IRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYA 415
+ S W + NDS V+ + +E VL + AY+LFY
Sbjct: 437 CKISGGQWFKFNDSMVSSISQEEVLKEQAYLLFYT 471
>gi|402895527|ref|XP_003910877.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Papio anubis]
Length = 605
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 118/338 (34%), Positives = 163/338 (48%), Gaps = 39/338 (11%)
Query: 108 AGLENLGNTCFINAILQCFTHTLPL----VQALRSFDHPRPCDGATEGFCVICALRDHIE 163
AGL NLGNTCF+N+ILQC ++T L +Q L D + T L I
Sbjct: 267 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHSSNAHTALMEEFAKLIQTIW 326
Query: 164 LSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLES----CCLDSKTKD 219
S S V+SP + + + F Y Q+DA EFL+ LLD L + L K+
Sbjct: 327 TS--SPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNP 384
Query: 220 ESLS----------------SQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE 263
E+L + D+ + +F G L S L C +CG CS ++P DLSL
Sbjct: 385 ENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLP 444
Query: 264 IEDVG----SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLK 319
I G +L + FTK E + D + K TC +C+ + K+ + + P + HLK
Sbjct: 445 IAKRGYPEVTLMDCMRLFTK-EDVLDGDEKPTCCRCRGRKRCIKKFSIQRFPKILVLHLK 503
Query: 320 RFKTDGSYVVKIDKHVEFPL-ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYF 378
RF K+ V FPL +LDL+ + S N V Y+LYA+ H G++ GHY
Sbjct: 504 RFSESRIRTSKLTTFVNFPLRDLDLREFASENTNHAV---YNLYAVSNHSGTT-MGGHYT 559
Query: 379 SYIRSSPDT--WHRLNDSRVTRVEEEFVLSQDAYILFY 414
+Y R SP T WH NDS VT + V + DAY+LFY
Sbjct: 560 AYCR-SPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLFY 596
>gi|196016423|ref|XP_002118064.1| hypothetical protein TRIADDRAFT_33494 [Trichoplax adhaerens]
gi|190579367|gb|EDV19464.1| hypothetical protein TRIADDRAFT_33494 [Trichoplax adhaerens]
Length = 342
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 113/342 (33%), Positives = 165/342 (48%), Gaps = 34/342 (9%)
Query: 108 AGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLA 167
GL+NLGNTCF+N+ILQC ++T L + + R G + + + S+
Sbjct: 3 VGLKNLGNTCFMNSILQCLSNTKALTSFVLDNSYSRFISGKSSMHGKLMEAYASLMRSMW 62
Query: 168 SSG---KVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRL-ESCCLDSKTKDESLS 223
S LSP + + F Y Q+DA EFL+ LL L E +S+ K + +S
Sbjct: 63 KSDTKETALSPATFKSQIQRFAPRFVGYSQQDAQEFLRFLLAGLHEDLLHNSREKPKIIS 122
Query: 224 ---------------------SQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSL 262
S D+ V +F G L S L+C C + S T++P DLSL
Sbjct: 123 TEEYDELQPEDKAVYCWKLYKSTDDSKVAELFVGQLKSTLECTVCKNQSVTFDPFWDLSL 182
Query: 263 EIEDVG--SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKR 320
I + +L L+ FT+ E + TC KCK + K+L + K P + H KR
Sbjct: 183 PIPKISTITLLDCLKLFTREETLSGDNMP-TCSKCKTKTVCTKKLSVQKFPQILVIHFKR 241
Query: 321 FKTDGSYVVKIDKHVEFPLE-LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFS 379
F + Y K++ ++FP++ LDL + G S + KY+LYAI H GS+ GHY +
Sbjct: 242 F-SGIHYRTKLNTLIDFPIDKLDLLNF--AGTTSTISCKYNLYAISNHSGST-VGGHYTA 297
Query: 380 YIRS-SPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTE 420
Y +S TW+ ND+RV V V S AY+LFY +Q T+
Sbjct: 298 YCKSPHTQTWYMFNDTRVQPVSSNEVKSSQAYVLFYEQQLTQ 339
>gi|449267415|gb|EMC78360.1| Ubiquitin carboxyl-terminal hydrolase 2, partial [Columba livia]
Length = 450
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 116/339 (34%), Positives = 159/339 (46%), Gaps = 43/339 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLV------QALRSF-DHPRPCDGATEGFCVICALRDH 161
GL NLGNTCF+N+ILQC ++T L Q LR ++ R F + L
Sbjct: 113 GLRNLGNTCFMNSILQCLSNTKELRDYCLQNQYLRDLNNNSRMRTALMSEFAKLIQL--- 169
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCC--------- 212
L +S + +SP + + + F Y Q+DA EFL+ LLD L S
Sbjct: 170 --LWTSSPNENVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHSEVNRVLVRPRA 227
Query: 213 ----LDSKTKDES-------LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLS 261
LD DE + D+ + +F G L S L C CG CS ++P DLS
Sbjct: 228 STDTLDHLPDDEKSRQMWRRYQEREDSRISDLFVGQLKSSLTCSECGYCSTAFDPFWDLS 287
Query: 262 LEIEDVG----SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFH 317
L I +L L FTK E + D + K TC +CK + K+ + K P + H
Sbjct: 288 LPIPKKSYGEVTLMDCLRLFTK-EDVLDGDEKPTCCRCKARTRCTKKFSIQKFPKILVLH 346
Query: 318 LKRFKTDGSYVVKIDKHVEFPL-ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGH 376
LKRF K+ V F L +LDL+ + S N V Y+LYA+ H G++ GH
Sbjct: 347 LKRFSEARIRTSKLTTFVNFQLKDLDLREFASQSCNHAV---YNLYAVSNHSGTT-MGGH 402
Query: 377 YFSYIRSSPDT-WHRLNDSRVTRVEEEFVLSQDAYILFY 414
Y +Y ++ + WH NDSRVT + V S DAY+LFY
Sbjct: 403 YTAYCKNPVSSEWHSFNDSRVTPMSSSHVRSSDAYLLFY 441
>gi|383865627|ref|XP_003708274.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Megachile
rotundata]
Length = 502
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 106/346 (30%), Positives = 162/346 (46%), Gaps = 42/346 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDH---PRPCDGATEGFCVICALRDHIELS 165
GL NLG+TCF+N I+Q HT PL++ D P+P C++C + +
Sbjct: 160 GLINLGSTCFMNCIVQALIHT-PLLRDYFLADRHHCPQPTR------CLVCEVSHLFQEF 212
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
+ S L+ KL+ + + Y+Q+DAHEF LD L C + +
Sbjct: 213 YSGSKAPLTLHKLLHLIWTHARHLAGYEQQDAHEFFIATLDVLHRHCEAAPILVKDNPHH 272
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVG------------SLGSA 273
+ I+ ++F G L S + C C S T +P D+SL++ SL
Sbjct: 273 CNCIIDQIFTGGLQSDVVCQACNGVSTTIDPFWDISLDLGPAASASGSDSSGPPTSLLDC 332
Query: 274 LESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDK 333
LE FT+ E + K C C+ KQL + ++P VA+FHLKRF+ KI
Sbjct: 333 LERFTRAEHL-GSSAKIKCSNCQTYQESTKQLTMKQLPIVASFHLKRFEHSSIQDKKIST 391
Query: 334 HVEFPLELDLKPYTS---GGQNSDVEL---------------KYHLYAIVEHMGSSPTCG 375
+ FP +LD+ P+ S G N+ + +Y L+A++ H GS T G
Sbjct: 392 FISFPEQLDMTPFMSHRRNGNNNSAMMDGLAKNGEDMAFSDNRYSLFAVINHEGSLET-G 450
Query: 376 HYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
HY ++IR D W + +D +TR + VL+ + Y+LFY KQ E+
Sbjct: 451 HYTAFIRQQRDQWFKCDDHLITRARLKDVLTSEGYLLFYHKQILEY 496
>gi|222632186|gb|EEE64318.1| hypothetical protein OsJ_19155 [Oryza sativa Japonica Group]
Length = 628
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 146/277 (52%), Gaps = 16/277 (5%)
Query: 150 EGFCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLD--- 206
+G CV R L +G + SP K++ L + F+ +QEDAHEFL+ ++D
Sbjct: 53 QGVCVCVVERQISRLLRTEAGALDSPAKIIRCLPLFAEHFRWGRQEDAHEFLRYIIDACH 112
Query: 207 --------RLESCCLDSKTKDESLSSQGDNIVQR-VFGGCLISKLQCCNCGSCSDTYEPL 257
RL + + +E + QG +V + FGG L+S+++C C S+ + +
Sbjct: 113 TAGLRIRKRLPASNANGDAGEEEVRVQGPYMVMKETFGGALLSQVKCLTCKGESNKTDEI 172
Query: 258 IDLSLEIEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFH 317
+D+SL++ S+ AL F + E +E K++CE+CK+ S KQL + + P V
Sbjct: 173 MDISLDLPGSNSVADALARFFQPEILEG-SNKYSCERCKKLTSARKQLFVLRAPKVLVIQ 231
Query: 318 LKRFKTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHY 377
LKRF +G KI++++EF L L + +N D Y+L+ + H G SP GHY
Sbjct: 232 LKRF--EGINGGKINRNIEFKETLFLSDFMYN-KNQDSLPVYNLFGSIVHSGFSPDSGHY 288
Query: 378 FSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFY 414
++Y++ + W+ NDS ++ + VLS+ YILFY
Sbjct: 289 YAYVKDAIGRWYCCNDSHISPSSSQDVLSEKVYILFY 325
>gi|114640783|ref|XP_001166112.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 isoform 5 [Pan
troglodytes]
Length = 605
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 118/341 (34%), Positives = 166/341 (48%), Gaps = 45/341 (13%)
Query: 108 AGLENLGNTCFINAILQCFTHTLPL----VQAL--RSFDHPRPCDGATEGFCVICALRDH 161
AGL NLGNTCF+N+ILQC ++T L +Q L R H G+ ++
Sbjct: 267 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHH-----GSNAHTALVEEFAKL 321
Query: 162 IELSLASS-GKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLES----CCLDSK 216
I+ SS V+SP + + + F Y Q+DA EFL+ LLD L + L K
Sbjct: 322 IQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPK 381
Query: 217 TKDESLS----------------SQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDL 260
+ E+L + D+ + +F G L S L C +CG CS ++P DL
Sbjct: 382 SNPENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDL 441
Query: 261 SLEIEDVG----SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAF 316
SL I G +L + FTK E + D + K TC +C+ + K+ + + P +
Sbjct: 442 SLPIAKRGYPEVTLMDCMRLFTK-EDVLDGDEKPTCCRCRGRKRCIKKFSIQRFPKILVL 500
Query: 317 HLKRFKTDGSYVVKIDKHVEFPL-ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCG 375
HLKRF K+ V FPL +LDL+ + S N V Y+LYA+ H G++ G
Sbjct: 501 HLKRFSESRIRTSKLTTFVNFPLRDLDLREFASENTNHAV---YNLYAVSNHSGTT-MGG 556
Query: 376 HYFSYIRSSPDT--WHRLNDSRVTRVEEEFVLSQDAYILFY 414
HY +Y R SP T WH NDS VT + V + DAY+LFY
Sbjct: 557 HYTAYCR-SPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLFY 596
>gi|403298210|ref|XP_003939924.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Saimiri
boliviensis boliviensis]
Length = 498
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 124/367 (33%), Positives = 170/367 (46%), Gaps = 59/367 (16%)
Query: 107 GAGLENLGNTCFINAILQ---------CFTHTLPLVQ------ALRSFDHPRPCDGATEG 151
GL NLGNTCF+NAILQ C+ LP V+ A R H R
Sbjct: 136 ATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTR--SQGDNN 193
Query: 152 FCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRL--- 208
++ R + S SP L + I F+ YQQ+DAHEF++ LLD L
Sbjct: 194 VSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE 253
Query: 209 ---------------ESCCLDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDT 253
E+ L + K + +V +FGG L +++ C CG+ S
Sbjct: 254 LQGGFNGVSRSTILQENSALSASNK--CCINGASTVVTAIFGGILQNEVNCLICGTESRK 311
Query: 254 YEPLIDLSLEIED--------------VGSLGSALESFTKLEKIEDPETKFTCEKCKEQV 299
++P +DLSL+I V SL L SFT LE++++ E + C KCK++
Sbjct: 312 FDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETEL-YMCHKCKKKQ 370
Query: 300 SVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE-LDLKPYTSGGQNSDVE-L 357
K+ + K+P V HLKRF K+D +VEFPL LD+K Y +NS +
Sbjct: 371 KSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPDSC 430
Query: 358 KYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFY--- 414
Y L A+V H GS GHY +Y + W NDS VT +EE V+ AYILFY
Sbjct: 431 LYDLAAVVVHHGSGVGSGHYTAYA-THEGRWFHFNDSTVTLTDEETVVKAKAYILFYVER 489
Query: 415 -AKQGTE 420
AK G++
Sbjct: 490 QAKAGSD 496
>gi|355727980|gb|AES09374.1| ubiquitin specific peptidase 3 [Mustela putorius furo]
Length = 472
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 124/367 (33%), Positives = 170/367 (46%), Gaps = 59/367 (16%)
Query: 107 GAGLENLGNTCFINAILQ---------CFTHTLPLVQ------ALRSFDHPRPCDGATEG 151
GL NLGNTCF+NAILQ C+ LP V+ A R H R
Sbjct: 110 ATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTR--SQGDNN 167
Query: 152 FCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRL--- 208
++ R + S SP L + I F+ YQQ+DAHEF++ LLD L
Sbjct: 168 VSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE 227
Query: 209 ---------------ESCCLDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDT 253
E+ L + K + +V +FGG L +++ C CG+ S
Sbjct: 228 LQGGFNGVSRSAILQENSALSASNK--CCINGASTVVTAIFGGILQNEVNCLICGTESRK 285
Query: 254 YEPLIDLSLEIED--------------VGSLGSALESFTKLEKIEDPETKFTCEKCKEQV 299
++P +DLSL+I V SL L SFT LE++++ E + C KCK++
Sbjct: 286 FDPFLDLSLDIPSQFRNKRSKNQENGPVCSLRDCLRSFTDLEELDETEL-YMCHKCKKKQ 344
Query: 300 SVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE-LDLKPYTSGGQNSDVE-L 357
K+ + K+P V HLKRF K+D +VEFPL LD+K Y +NS E
Sbjct: 345 KSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPEHC 404
Query: 358 KYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFY--- 414
Y L A+V H GS GHY +Y + W NDS VT +E+ V+ AYILFY
Sbjct: 405 LYDLAAVVVHHGSGVGSGHYTAYA-THEGRWFHFNDSTVTLTDEDTVVKAKAYILFYVER 463
Query: 415 -AKQGTE 420
AK G++
Sbjct: 464 QAKAGSD 470
>gi|153792416|ref|NP_001093229.1| ubiquitin carboxyl-terminal hydrolase 3 [Equus caballus]
gi|148529824|gb|ABQ82144.1| ubiquitin specific peptidase 3 [Equus caballus]
Length = 520
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 123/365 (33%), Positives = 170/365 (46%), Gaps = 55/365 (15%)
Query: 107 GAGLENLGNTCFINAILQ---------CFTHTLPLVQ------ALRSFDHPRPCDGATEG 151
GL NLGNTCF+NAILQ C+ LP V+ A R H R
Sbjct: 158 ATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTR--SQGDNN 215
Query: 152 FCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLE-- 209
++ R + S SP L + I F+ YQQ+DAHEF++ LLD L
Sbjct: 216 VSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE 275
Query: 210 ----------SCCLDSKT----KDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYE 255
S L + ++ + +V +FGG L +++ C CG+ S ++
Sbjct: 276 LQGGFNGVSRSAILQENSTLSPSNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFD 335
Query: 256 PLIDLSLEIED--------------VGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSV 301
P +DLSL+I V SL L SFT LE++++ E + C KCK++
Sbjct: 336 PFLDLSLDIPSQFRNKRSKNQENGPVCSLRDCLRSFTDLEELDETEL-YMCHKCKKKQKS 394
Query: 302 EKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE-LDLKPYTSGGQNSDVE-LKY 359
K+ + K+P V HLKRF K+D +VEFPL LD+K Y +NS E Y
Sbjct: 395 TKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPENCLY 454
Query: 360 HLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFY----A 415
L A+V H GS GHY +Y + W NDS VT +E+ V+ AYILFY A
Sbjct: 455 DLAAVVVHHGSGVGSGHYTAYA-THEGRWFHFNDSTVTLTDEDTVVKAKAYILFYVERQA 513
Query: 416 KQGTE 420
K G++
Sbjct: 514 KAGSD 518
>gi|345795043|ref|XP_865326.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 2 [Canis
lupus familiaris]
Length = 476
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 123/365 (33%), Positives = 170/365 (46%), Gaps = 55/365 (15%)
Query: 107 GAGLENLGNTCFINAILQ---------CFTHTLPLVQ------ALRSFDHPRPCDGATEG 151
GL NLGNTCF+NAILQ C+ LP V+ A R H R
Sbjct: 114 ATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTR--SQGDNN 171
Query: 152 FCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLE-- 209
++ R + S SP L + I F+ YQQ+DAHEF++ LLD L
Sbjct: 172 VSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE 231
Query: 210 ----------SCCLDSKT----KDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYE 255
S L + ++ + +V +FGG L +++ C CG+ S ++
Sbjct: 232 LQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFD 291
Query: 256 PLIDLSLEIED--------------VGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSV 301
P +DLSL+I V SL L SFT LE++++ E + C KCK++
Sbjct: 292 PFLDLSLDIPSQFRNKRSKNQENGPVCSLRDCLRSFTDLEELDETEL-YMCHKCKKKQKS 350
Query: 302 EKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE-LDLKPYTSGGQNSDVE-LKY 359
K+ + K+P V HLKRF K+D +VEFPL LD+K Y +NS E Y
Sbjct: 351 TKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPEHCLY 410
Query: 360 HLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFY----A 415
L A+V H GS GHY +Y + W NDS VT +E+ V+ AYILFY A
Sbjct: 411 DLAAVVVHHGSGVGSGHYTAYA-THEGRWFHFNDSTVTLTDEDTVVKAKAYILFYVERQA 469
Query: 416 KQGTE 420
K G++
Sbjct: 470 KAGSD 474
>gi|212722906|ref|NP_001132802.1| uncharacterized protein LOC100194291 [Zea mays]
gi|194695428|gb|ACF81798.1| unknown [Zea mays]
gi|413937406|gb|AFW71957.1| putative ubiquitin carboxyl-terminal hydrolase superfamily protein
[Zea mays]
Length = 417
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 105/349 (30%), Positives = 168/349 (48%), Gaps = 51/349 (14%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLV-QALRSFDHPRPCDGATEGFCVICA-LRDHIELSL 166
GLEN GNTC+ N++LQ + P Q L + R + A E A L I S
Sbjct: 68 GLENFGNTCYCNSVLQALYYCAPFREQLLEYYRRNRNLEDAEENLLTCLADLFSQISASK 127
Query: 167 ASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL--DSKTKDESLSS 224
+G V++P++ + + ++ +F+ Y +DAHEFL LL+ + S KD ++
Sbjct: 128 KKTG-VIAPKRFIQMVRKLNEYFRGYMHQDAHEFLNFLLNEIVDILEKESSSAKDSPGTT 186
Query: 225 QGDNI-----------------VQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDV 267
+N+ V + F G L ++ +C C + + E DLS++IE
Sbjct: 187 SSENVSNGAAVDGVRKEPLVTWVHKNFQGILTNETRCLMCETITAKDETFFDLSVDIEQN 246
Query: 268 GSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSY 327
SL S L++F E + + + KF C+KC EK++ + K P + HLKRFK +
Sbjct: 247 SSLTSCLKNFFSTETL-NADDKFFCDKCCSLQEAEKRMKIKKAPQILVIHLKRFK----F 301
Query: 328 VVKIDKH------VEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYI 381
+ ++++H V +PLEL L ++D + +Y L+A+V H+GS P GHY + I
Sbjct: 302 IEQLNRHKKLSYRVVYPLELKLSS-----NSADADCEYSLFAVVVHLGSGPNQGHYVAMI 356
Query: 382 RSSPDTWHRLNDSRVTRVEE-----------EFVLSQD-AYILFYAKQG 418
+S D W +D V + E E+ + D YILFY + G
Sbjct: 357 KSH-DHWLSFDDDNVEMIPESTLQTFYGSYHEYSGNTDHGYILFYGRIG 404
>gi|380022381|ref|XP_003695028.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 22-like [Apis florea]
Length = 502
Score = 149 bits (376), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 107/346 (30%), Positives = 163/346 (47%), Gaps = 42/346 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDH---PRPCDGATEGFCVICALRDHIELS 165
GL NLG+TCF+N I+Q HT PL++ D P+P C++C + +
Sbjct: 160 GLINLGSTCFMNCIVQALIHT-PLLRDYFLADRHHCPQPTR------CLVCEVSHLFQEF 212
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
+ S L+ KL+ + + Y+Q+DAHEF LD L C + +
Sbjct: 213 YSGSKAPLTLHKLLHLIWTHARHLAGYEQQDAHEFFIATLDVLHRHCEAAPILIKDNPHH 272
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVG------------SLGSA 273
+ I+ ++F G L S + C C S T +P D+SL++ SL
Sbjct: 273 CNCIIDQIFTGGLQSDVVCQACNGVSTTIDPFWDISLDLGPAASASGSDSSGPPTSLLDC 332
Query: 274 LESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDK 333
LE FT+ E + K C C+ KQL + ++P VA+FHLKRF+ KI
Sbjct: 333 LERFTRAEHL-GSSAKIKCSNCQTYQESTKQLTMKQLPIVASFHLKRFEHSSIQDKKIST 391
Query: 334 HVEFPLELDLKPYTS----GGQNSDV--------------ELKYHLYAIVEHMGSSPTCG 375
+ FP +LD+ P+ S G NS + + +Y L+A++ H GS T G
Sbjct: 392 FISFPEQLDMTPFMSHRRNGNNNSAMIDGLPKNGEDMAFSDNRYSLFAVINHEGSLET-G 450
Query: 376 HYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
HY ++IR D W + +D +TR + VL+ + Y+LFY KQ E+
Sbjct: 451 HYTAFIRQQRDQWFKCDDHLITRARLKDVLTSEGYLLFYHKQILEY 496
>gi|327286811|ref|XP_003228123.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Anolis
carolinensis]
Length = 533
Score = 149 bits (376), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 124/361 (34%), Positives = 171/361 (47%), Gaps = 58/361 (16%)
Query: 107 GAGLENLGNTCFINAILQ---------CFTHTLPLVQ------ALRSFDHPRPCDGATEG 151
GL NLGNTCF+NAILQ C+ LP V+ A R H R G
Sbjct: 159 ATGLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRTYHTR--SQGDNG 216
Query: 152 FCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLE-- 209
++ R + S SP L + I F+ YQQ+DAHEF++ LLD L
Sbjct: 217 VSLVEEFRKTLCALWQGSQAAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHRE 276
Query: 210 -----------SCCLDSKTKDESLSSQG-------DNIVQRVFGGCLISKLQCCNCGSCS 251
S L ++ LS+ G +V +FGG L +++ C CG+ S
Sbjct: 277 LQGGFNGVSRSSVLLQ---ENSGLSAGGRCCINGASTVVTAIFGGILQNEVNCLICGTES 333
Query: 252 DTYEPLIDLSLEI-----------EDVG---SLGSALESFTKLEKIEDPETKFTCEKCKE 297
++P +DLSL+I ++ G +L L SFT LE++++ E + C KCK+
Sbjct: 334 RKFDPFLDLSLDIPSQFRNKRSKNQENGPTCTLRDCLRSFTDLEELDETEL-YMCHKCKK 392
Query: 298 QVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE-LDLKPYTSGGQNSDVE 356
+ K+ + K+P V HLKRF K+D +VEFPL LD+K + +NS E
Sbjct: 393 KQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCFLLEPENSRPE 452
Query: 357 -LKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYA 415
Y L A+V H GS GHY +Y + W NDS VT +EE VL AYILFY
Sbjct: 453 NCLYDLAAVVVHHGSGVGSGHYTAYA-AHEGRWFHFNDSTVTLTDEETVLRAKAYILFYV 511
Query: 416 K 416
+
Sbjct: 512 E 512
>gi|356563930|ref|XP_003550210.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Glycine
max]
Length = 555
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 108/362 (29%), Positives = 178/362 (49%), Gaps = 59/362 (16%)
Query: 103 PTGVGAGLENLGNTCFINAILQCFTHTLPLV-------QALRSFDHPRPCDGATEGFCVI 155
P G+ GL NLG+TCF+N++LQ + P L + H R D C++
Sbjct: 177 PVGL-RGLNNLGSTCFMNSVLQVLLNAPPFRDYFLSGGHRLEACHHRRTADLMC---CLL 232
Query: 156 CALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDS 215
C + + + SP + + + S+ Y+Q+DAHEF +LD + +S
Sbjct: 233 CDVNAIFSAAYSGDRSPYSPAQFLYSWWQHSANLACYEQQDAHEFFISMLDAIHE--KES 290
Query: 216 KTKDESLSSQGDN--IVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE-------- 265
KT++ S GD I +VF G L S + C CG S TY+P +D+SL ++
Sbjct: 291 KTRNGS-KGNGDCQCIAHKVFYGLLRSDVTCMACGFTSTTYDPCVDISLNLDTNVSSTEK 349
Query: 266 -----------DVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVA 314
+ +L L+ FT+ EK+ + K C C+E+ KQ+ + K+P V
Sbjct: 350 GKKLTKQNEDGSMSTLFGCLDLFTRPEKL-GSDQKLYCRNCRERQDSLKQMSIRKLPLVL 408
Query: 315 AFHLKRFKTDGSYVV----KIDKHVEFPLELDLKPYTS---------------GGQNSDV 355
+ H+KRF + S+V KID+++ FP LD+ PY S GG SD+
Sbjct: 409 SLHVKRF--EHSFVKKSSRKIDRYLHFPFSLDMSPYLSSSILRARYGNRIFNFGGDQSDM 466
Query: 356 ELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYA 415
++ ++A+V H G+ + GHY S++R + W+R +D+ +T V+E V + Y++FY
Sbjct: 467 FSEFEIFAVVTHSGTLES-GHYVSFVRLR-NQWYRCDDAWITVVDEATVRASQCYMIFYV 524
Query: 416 KQ 417
++
Sbjct: 525 QK 526
>gi|397498540|ref|XP_003820038.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Pan paniscus]
Length = 605
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 118/341 (34%), Positives = 166/341 (48%), Gaps = 45/341 (13%)
Query: 108 AGLENLGNTCFINAILQCFTHTLPL----VQAL--RSFDHPRPCDGATEGFCVICALRDH 161
AGL NLGNTCF+N+ILQC ++T L +Q L R H G+ ++
Sbjct: 267 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHH-----GSNAHTALVEEFAKL 321
Query: 162 IELSLASS-GKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLES----CCLDSK 216
I+ SS V+SP + + + F Y Q+DA EFL+ LLD L + L K
Sbjct: 322 IQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPK 381
Query: 217 TKDESLS----------------SQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDL 260
+ E+L + D+ + +F G L S L C +CG CS ++P DL
Sbjct: 382 SNPENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDL 441
Query: 261 SLEIEDVG----SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAF 316
SL I G +L + FTK E + D + K TC +C+ + K+ + + P +
Sbjct: 442 SLPIAKRGYPEVTLMDCMRLFTK-EDVLDGDEKPTCCRCRGRKRCIKKFSIQRFPKILVL 500
Query: 317 HLKRFKTDGSYVVKIDKHVEFPL-ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCG 375
HLKRF K+ V FPL +LDL+ + S N V Y+LYA+ H G++ G
Sbjct: 501 HLKRFSESRIRTSKLTTFVNFPLRDLDLREFASENTNHAV---YNLYAVSNHSGTT-MGG 556
Query: 376 HYFSYIRSSPDT--WHRLNDSRVTRVEEEFVLSQDAYILFY 414
HY +Y R SP T WH NDS VT + V + DAY+LFY
Sbjct: 557 HYTAYCR-SPGTGEWHTFNDSSVTPMSPSQVRTSDAYLLFY 596
>gi|66534853|ref|XP_395389.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Apis
mellifera]
Length = 502
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 107/346 (30%), Positives = 163/346 (47%), Gaps = 42/346 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDH---PRPCDGATEGFCVICALRDHIELS 165
GL NLG+TCF+N I+Q HT PL++ D P+P C++C + +
Sbjct: 160 GLINLGSTCFMNCIVQALIHT-PLLRDYFLADRHHCPQPTR------CLVCEVSHLFQEF 212
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
+ S L+ KL+ + + Y+Q+DAHEF LD L C + +
Sbjct: 213 YSGSKAPLTLHKLLHLIWTHARHLAGYEQQDAHEFFIATLDVLHRHCEAAPILIKDNPHH 272
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVG------------SLGSA 273
+ I+ ++F G L S + C C S T +P D+SL++ SL
Sbjct: 273 CNCIIDQIFTGGLQSDVVCQACNGVSTTIDPFWDISLDLGPAASASGSDSSGPPTSLLDC 332
Query: 274 LESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDK 333
LE FT+ E + K C C+ KQL + ++P VA+FHLKRF+ KI
Sbjct: 333 LERFTRAEHL-GSSAKIKCSNCQTYQESTKQLTMKQLPIVASFHLKRFEHSSIQDKKIST 391
Query: 334 HVEFPLELDLKPYTS----GGQNSDV--------------ELKYHLYAIVEHMGSSPTCG 375
+ FP +LD+ P+ S G NS + + +Y L+A++ H GS T G
Sbjct: 392 FISFPEQLDMTPFMSHRRNGNNNSAMIDGLPKNGEDMAFSDNRYSLFAVINHEGSLET-G 450
Query: 376 HYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
HY ++IR D W + +D +TR + VL+ + Y+LFY KQ E+
Sbjct: 451 HYTAFIRQQRDQWFKCDDHLITRARLKDVLTSEGYLLFYHKQILEY 496
>gi|345795041|ref|XP_544715.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 1 [Canis
lupus familiaris]
Length = 520
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 123/365 (33%), Positives = 170/365 (46%), Gaps = 55/365 (15%)
Query: 107 GAGLENLGNTCFINAILQ---------CFTHTLPLVQ------ALRSFDHPRPCDGATEG 151
GL NLGNTCF+NAILQ C+ LP V+ A R H R
Sbjct: 158 ATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTR--SQGDNN 215
Query: 152 FCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLE-- 209
++ R + S SP L + I F+ YQQ+DAHEF++ LLD L
Sbjct: 216 VSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE 275
Query: 210 ----------SCCLDSKT----KDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYE 255
S L + ++ + +V +FGG L +++ C CG+ S ++
Sbjct: 276 LQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFD 335
Query: 256 PLIDLSLEIED--------------VGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSV 301
P +DLSL+I V SL L SFT LE++++ E + C KCK++
Sbjct: 336 PFLDLSLDIPSQFRNKRSKNQENGPVCSLRDCLRSFTDLEELDETEL-YMCHKCKKKQKS 394
Query: 302 EKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE-LDLKPYTSGGQNSDVE-LKY 359
K+ + K+P V HLKRF K+D +VEFPL LD+K Y +NS E Y
Sbjct: 395 TKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPEHCLY 454
Query: 360 HLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFY----A 415
L A+V H GS GHY +Y + W NDS VT +E+ V+ AYILFY A
Sbjct: 455 DLAAVVVHHGSGVGSGHYTAYA-THEGRWFHFNDSTVTLTDEDTVVKAKAYILFYVERQA 513
Query: 416 KQGTE 420
K G++
Sbjct: 514 KAGSD 518
>gi|407037720|gb|EKE38765.1| ubiquitin carboxyl-terminal hydrolase domain containing protein
[Entamoeba nuttalli P19]
Length = 584
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 162/350 (46%), Gaps = 32/350 (9%)
Query: 105 GVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIEL 164
G G N + C++ ++LQ THT P + D L ++
Sbjct: 63 NAGRGYFNAHSNCYMISVLQVLTHTAPFYNYMTQ--QKIKVDD-----IFFKELERIMKE 115
Query: 165 SLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRL-ESCCLDSKTKDESLS 223
+ + + L P NL +SS QRYQQEDA EF LLD L E+ K K ++S
Sbjct: 116 AFEKNNQPLKPIVFEKNLKKLSSSLQRYQQEDATEFYLLLLDHLHEAIIGKGKNKISAIS 175
Query: 224 SQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKI 283
S +F L+S++ C NC +D E L +EI +L S + F K E I
Sbjct: 176 S--------IFHVELVSRITCYNCTRFNDHDEHFSVLPIEITKQKTLESGFDQFFKKEMI 227
Query: 284 EDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDL 343
+ + CEKC + +V K ++P + LKRF D KI+ V FPL+L++
Sbjct: 228 ----SHYHCEKCNTKSNVSKYYFFKRLPWILPIQLKRFTWDEK---KINGKVAFPLQLNI 280
Query: 344 KPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
Y G Y LYAIV H+G + GHY SY ++ W R +D V V +
Sbjct: 281 SKYGMDGL-------YDLYAIVVHLGKTKFSGHYISYCKTPSGGWFRFDDDEVKPVSIKA 333
Query: 404 VLSQDAYILFYAKQGTEWVSSLLEAESIGM-NADISNSSPKSVLDNVEND 452
VL ++AY+LFY+K E VS+ E + + N ++ S + +N +ND
Sbjct: 334 VLQEEAYMLFYSK-SEEKVSTPKEIKRGAIENNNLEKLSTIVMKENEQND 382
>gi|126326536|ref|XP_001370349.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 isoform 1
[Monodelphis domestica]
Length = 600
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 119/338 (35%), Positives = 162/338 (47%), Gaps = 39/338 (11%)
Query: 108 AGLENLGNTCFINAILQCFTHTLPL----VQALRSFDHPRPCDGATEGFCVICALRDHIE 163
AGL NLGNTCF+N+ILQC ++T L +Q L D T L I
Sbjct: 262 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYLRDLNSSSHAHTALMEEFAKLIQTIW 321
Query: 164 LSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLES----CCLDSKTKD 219
S S+ V+SP + + + F Y Q+DA EFL+ LLD L + + K+
Sbjct: 322 TS--SANDVVSPSEFKTQIQRFAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTVRPKSNP 379
Query: 220 ESLS----------------SQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE 263
E+L + D+ + +F G L S L C CG CS ++P DLSL
Sbjct: 380 ENLDHLPDEEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTECGYCSTVFDPFWDLSLP 439
Query: 264 IEDVG----SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLK 319
I G +L + FTK E + D + K TC +C+ + K+ + K P + HLK
Sbjct: 440 IAKRGYPEVTLMDCMRLFTK-EDVLDGDEKPTCCRCRARKRCIKKFSIQKFPKILVLHLK 498
Query: 320 RFKTDGSYVVKIDKHVEFPL-ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYF 378
RF K+ V FPL +LDL+ + S N V Y+LYA+ H G++ GHY
Sbjct: 499 RFSESRIRTSKLTTFVNFPLRDLDLREFASENTNHAV---YNLYAVSNHSGTT-MGGHYT 554
Query: 379 SYIRSSPDT--WHRLNDSRVTRVEEEFVLSQDAYILFY 414
+Y R SP T WH NDS VT + V S DAY+LFY
Sbjct: 555 AYCR-SPVTGEWHTFNDSSVTPMSSSQVRSSDAYLLFY 591
>gi|123998135|gb|ABM86669.1| ubiquitin specific peptidase 2 [synthetic construct]
Length = 605
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 118/341 (34%), Positives = 166/341 (48%), Gaps = 45/341 (13%)
Query: 108 AGLENLGNTCFINAILQCFTHTLPL----VQAL--RSFDHPRPCDGATEGFCVICALRDH 161
AGL NLGNTCF+N+ILQC ++T L +Q L R H G+ ++
Sbjct: 267 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHH-----GSNAHTALVEEFAKL 321
Query: 162 IELSLASS-GKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLES----CCLDSK 216
I+ SS V+SP + + + F Y Q+DA EFL+ LLD L + L K
Sbjct: 322 IQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPK 381
Query: 217 TKDESLS----------------SQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDL 260
+ E+L + D+ + +F G L S L C +CG CS ++P DL
Sbjct: 382 SNPENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDL 441
Query: 261 SLEIEDVG----SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAF 316
SL I G +L + FTK E + D + K TC +C+ + K+ + + P +
Sbjct: 442 SLPIAKRGYPEVTLMDCMRLFTK-EDVLDGDEKPTCCRCRGRKRCIKKFSIQRFPKILVL 500
Query: 317 HLKRFKTDGSYVVKIDKHVEFPL-ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCG 375
HLKRF K+ V FPL +LDL+ + S N V Y+LYA+ H G++ G
Sbjct: 501 HLKRFSESRIRTSKLTTFVNFPLRDLDLREFASENTNHAV---YNLYAVSNHSGTT-MGG 556
Query: 376 HYFSYIRSSPDT--WHRLNDSRVTRVEEEFVLSQDAYILFY 414
HY +Y R SP T WH NDS VT + V + DAY+LFY
Sbjct: 557 HYTAYCR-SPGTGEWHTFNDSSVTPMSSRQVRTSDAYLLFY 596
>gi|188528692|ref|NP_004196.4| ubiquitin carboxyl-terminal hydrolase 2 isoform a [Homo sapiens]
gi|20141855|sp|O75604.2|UBP2_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 2; AltName:
Full=41 kDa ubiquitin-specific protease; AltName:
Full=Deubiquitinating enzyme 2; AltName: Full=Ubiquitin
thioesterase 2; AltName:
Full=Ubiquitin-specific-processing protease 2
gi|12804005|gb|AAH02854.1| Ubiquitin specific peptidase 2 [Homo sapiens]
gi|12804195|gb|AAH02955.1| Ubiquitin specific peptidase 2 [Homo sapiens]
gi|119587889|gb|EAW67485.1| ubiquitin specific peptidase 2, isoform CRA_b [Homo sapiens]
gi|123983451|gb|ABM83458.1| ubiquitin specific peptidase 2 [synthetic construct]
gi|167887743|gb|ACA06097.1| ubiquitin carboxyl-terminal hydrolase 2 variant 1 [Homo sapiens]
Length = 605
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 118/341 (34%), Positives = 166/341 (48%), Gaps = 45/341 (13%)
Query: 108 AGLENLGNTCFINAILQCFTHTLPL----VQAL--RSFDHPRPCDGATEGFCVICALRDH 161
AGL NLGNTCF+N+ILQC ++T L +Q L R H G+ ++
Sbjct: 267 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHH-----GSNAHTALVEEFAKL 321
Query: 162 IELSLASS-GKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLES----CCLDSK 216
I+ SS V+SP + + + F Y Q+DA EFL+ LLD L + L K
Sbjct: 322 IQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPK 381
Query: 217 TKDESLS----------------SQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDL 260
+ E+L + D+ + +F G L S L C +CG CS ++P DL
Sbjct: 382 SNPENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDL 441
Query: 261 SLEIEDVG----SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAF 316
SL I G +L + FTK E + D + K TC +C+ + K+ + + P +
Sbjct: 442 SLPIAKRGYPEVTLMDCMRLFTK-EDVLDGDEKPTCCRCRGRKRCIKKFSIQRFPKILVL 500
Query: 317 HLKRFKTDGSYVVKIDKHVEFPL-ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCG 375
HLKRF K+ V FPL +LDL+ + S N V Y+LYA+ H G++ G
Sbjct: 501 HLKRFSESRIRTSKLTTFVNFPLRDLDLREFASENTNHAV---YNLYAVSNHSGTT-MGG 556
Query: 376 HYFSYIRSSPDT--WHRLNDSRVTRVEEEFVLSQDAYILFY 414
HY +Y R SP T WH NDS VT + V + DAY+LFY
Sbjct: 557 HYTAYCR-SPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLFY 596
>gi|30584279|gb|AAP36388.1| Homo sapiens ubiquitin specific protease 2 [synthetic construct]
gi|60652721|gb|AAX29055.1| ubiquitin specific protease 2 [synthetic construct]
Length = 606
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 118/341 (34%), Positives = 166/341 (48%), Gaps = 45/341 (13%)
Query: 108 AGLENLGNTCFINAILQCFTHTLPL----VQAL--RSFDHPRPCDGATEGFCVICALRDH 161
AGL NLGNTCF+N+ILQC ++T L +Q L R H G+ ++
Sbjct: 267 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHH-----GSNAHTALVEEFAKL 321
Query: 162 IELSLASS-GKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLES----CCLDSK 216
I+ SS V+SP + + + F Y Q+DA EFL+ LLD L + L K
Sbjct: 322 IQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPK 381
Query: 217 TKDESLS----------------SQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDL 260
+ E+L + D+ + +F G L S L C +CG CS ++P DL
Sbjct: 382 SNPENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDL 441
Query: 261 SLEIEDVG----SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAF 316
SL I G +L + FTK E + D + K TC +C+ + K+ + + P +
Sbjct: 442 SLPIAKRGYPEVTLMDCMRLFTK-EDVLDGDEKPTCCRCRGRKRCIKKFSIQRFPKILVL 500
Query: 317 HLKRFKTDGSYVVKIDKHVEFPL-ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCG 375
HLKRF K+ V FPL +LDL+ + S N V Y+LYA+ H G++ G
Sbjct: 501 HLKRFSESRIRTSKLTTFVNFPLRDLDLREFASENTNHAV---YNLYAVSNHSGTT-MGG 556
Query: 376 HYFSYIRSSPDT--WHRLNDSRVTRVEEEFVLSQDAYILFY 414
HY +Y R SP T WH NDS VT + V + DAY+LFY
Sbjct: 557 HYTAYCR-SPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLFY 596
>gi|48475065|gb|AAT44134.1| unknown protein, contains ubiquitin carboxyl-terminal hydrolase
[Oryza sativa Japonica Group]
Length = 626
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 89/275 (32%), Positives = 147/275 (53%), Gaps = 17/275 (6%)
Query: 153 CVICALRDHIELSLAS-SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLD----- 206
CV C + I L + +G + SP K++ L + F+ +QEDAHEFL+ ++D
Sbjct: 53 CVFCVVERQISRLLRTEAGALDSPAKIIRCLPLFAEHFRWGRQEDAHEFLRYIIDACHTA 112
Query: 207 ------RLESCCLDSKTKDESLSSQGDNIVQR-VFGGCLISKLQCCNCGSCSDTYEPLID 259
RL + + +E + QG +V + FGG L+S+++C C S+ + ++D
Sbjct: 113 GLRIRKRLPASNANGDAGEEEVRVQGPYMVMKETFGGALLSQVKCLTCKGESNKTDEIMD 172
Query: 260 LSLEIEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLK 319
+SL++ S+ AL F + E +E K++CE+CK+ S KQL + + P V LK
Sbjct: 173 ISLDLPGSNSVADALARFFQPEILEG-SNKYSCERCKKLTSARKQLFVLRAPKVLVIQLK 231
Query: 320 RFKTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFS 379
RF +G KI++++EF L L + +N D Y+L+ + H G SP GHY++
Sbjct: 232 RF--EGINGGKINRNIEFKETLFLSDFMYN-KNQDSLPVYNLFGSIVHSGFSPDSGHYYA 288
Query: 380 YIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFY 414
Y++ + W+ NDS ++ + VLS+ YILFY
Sbjct: 289 YVKDAIGRWYCCNDSHISPSSSQDVLSEKVYILFY 323
>gi|195392830|ref|XP_002055057.1| GJ19166 [Drosophila virilis]
gi|194149567|gb|EDW65258.1| GJ19166 [Drosophila virilis]
Length = 938
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 101/334 (30%), Positives = 164/334 (49%), Gaps = 35/334 (10%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL N+GNTCF+N+++QC +HT L + LR+ H ++ ++ I+ +
Sbjct: 613 GLRNIGNTCFMNSVIQCLSHTTELTRFLRAH-HTSTRTATSKDQQILHEFAKLIQEMWTT 671
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESL------ 222
+ ++P +L + + Y Q+DA EFL+ LD L S L++ K E+L
Sbjct: 672 NVHSVTPMELKRAFSTKHRMYSDYNQQDAQEFLRFFLDSLHS-ALNTGVKGETLNIDDNL 730
Query: 223 -------------SSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVG- 268
+ +++++ +F G L S L+C CG+ S T++P DLS+ +
Sbjct: 731 SDNKKADLTWEWYARHENSLIRDLFVGQLKSTLKCTTCGNTSVTFDPFWDLSVPLPSSSR 790
Query: 269 -SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSY 327
L + L+ F + E++ D + TC KCK + K + + P HLKRF +
Sbjct: 791 CKLEACLDLFIR-EEVLDGDEMPTCSKCKTRRKCTKSFTIQRFPKYLVIHLKRFSE--TR 847
Query: 328 VVKIDKHVEFPL---ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSS 384
K+ VEFP EL++ Y G N++ + Y LYAI HMGS+ GHY + +
Sbjct: 848 WSKLSNIVEFPTADRELNMASY---GANANSNVHYSLYAISNHMGSTA-GGHYVALCKHP 903
Query: 385 -PDTWHRLNDSRVT-RVEEEFVLSQDAYILFYAK 416
WH ND+ V+ + E ++S AYILFY +
Sbjct: 904 VSHKWHEFNDNSVSDAIPENCLVSSSAYILFYER 937
>gi|395520122|ref|XP_003764186.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Sarcophilus
harrisii]
Length = 599
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 119/338 (35%), Positives = 162/338 (47%), Gaps = 39/338 (11%)
Query: 108 AGLENLGNTCFINAILQCFTHTLPL----VQALRSFDHPRPCDGATEGFCVICALRDHIE 163
AGL NLGNTCF+N+ILQC ++T L +Q L D T L I
Sbjct: 261 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYLRDLNSSSHAHTALMEEFAKLIQTIW 320
Query: 164 LSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLES----CCLDSKTKD 219
S S+ V+SP + + + F Y Q+DA EFL+ LLD L + + K+
Sbjct: 321 TS--SANDVVSPSEFKTQIQRFAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTVRPKSNP 378
Query: 220 ESLS----------------SQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE 263
E+L + D+ + +F G L S L C CG CS ++P DLSL
Sbjct: 379 ENLDHLPDEEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTECGYCSTVFDPFWDLSLP 438
Query: 264 IEDVG----SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLK 319
I G +L + FTK E + D + K TC +C+ + K+ + K P + HLK
Sbjct: 439 IAKRGYPEVTLMDCMRLFTK-EDVLDGDEKPTCCRCRARKRCIKKFSIQKFPKILVLHLK 497
Query: 320 RFKTDGSYVVKIDKHVEFPL-ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYF 378
RF K+ V FPL +LDL+ + S N V Y+LYA+ H G++ GHY
Sbjct: 498 RFSESRIRTSKLTTFVNFPLRDLDLREFASENTNHAV---YNLYAVSNHSGTT-MGGHYT 553
Query: 379 SYIRSSPDT--WHRLNDSRVTRVEEEFVLSQDAYILFY 414
+Y R SP T WH NDS VT + V S DAY+LFY
Sbjct: 554 AYCR-SPVTGEWHTFNDSSVTPMSSSQVRSSDAYLLFY 590
>gi|440907019|gb|ELR57212.1| Ubiquitin carboxyl-terminal hydrolase 3, partial [Bos grunniens
mutus]
Length = 492
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 125/367 (34%), Positives = 172/367 (46%), Gaps = 59/367 (16%)
Query: 107 GAGLENLGNTCFINAILQ---------CFTHTLPLVQ------ALRSFDHPRPCDGATEG 151
GL NLGNTCF+NAILQ C+ LP V+ A R H R
Sbjct: 130 ATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTR--SQGENN 187
Query: 152 FCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRL--- 208
++ R + S SP L + I F+ YQQ+DAHEF++ LLD L
Sbjct: 188 VSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE 247
Query: 209 ---------------ESCCLDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDT 253
E+ L + K + +V +FGG L +++ C CG+ S
Sbjct: 248 LQGGFNGISRSSILQENSTLSASNK--CCINGASTVVTAIFGGILQNEVNCLICGTESRK 305
Query: 254 YEPLIDLSLEI-----------EDVG---SLGSALESFTKLEKIEDPETKFTCEKCKEQV 299
++P +DLSL+I ++ G SL L SFT LE++++ E + C KCK++
Sbjct: 306 FDPFLDLSLDIPSQFRNKRSKNQENGPTCSLRDCLRSFTDLEELDETEL-YMCHKCKKKQ 364
Query: 300 SVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE-LDLKPYTSGGQNSDVE-L 357
K+ + K+P V HLKRF K+D +VEFPL LD+K Y +NS E
Sbjct: 365 KSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPENC 424
Query: 358 KYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFY--- 414
Y L A+V H GS GHY +Y + W NDS VT +E+ VL AYILFY
Sbjct: 425 LYDLAAVVVHHGSGVGSGHYTAYA-THEGRWFHFNDSTVTLTDEDTVLKAKAYILFYVER 483
Query: 415 -AKQGTE 420
AK G++
Sbjct: 484 QAKAGSD 490
>gi|357604445|gb|EHJ64192.1| putative ubiquitin specific protease 41 [Danaus plexippus]
Length = 913
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 116/339 (34%), Positives = 164/339 (48%), Gaps = 42/339 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRD---HIELS 165
GL N+GNTCF+N++LQC ++T PL++ L D D T C+ AL +
Sbjct: 580 GLRNIGNTCFMNSVLQCLSNTRPLLEYL--VDDKYNSDINTTLSCMKGALIKAFASVIKE 637
Query: 166 LASSGK---VLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTK---- 218
L SG V++ L + + F Y Q+DA EFL+ LL+ L K
Sbjct: 638 LWRSGDRDCVVNTTALKSQVQRFAPRFMGYSQQDAQEFLRYLLEGLHEDVNRVTVKPKPI 697
Query: 219 ----DESLSSQG-------------DNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLS 261
D+SLS D+ V +F G L S L+C +C S T++P DLS
Sbjct: 698 LTEIDDSLSDSAKAAEAWSRYLRTEDSRVGDIFVGQLKSTLRCTHCLHDSVTFDPFWDLS 757
Query: 262 LEIED-VGSLG--SALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHL 318
L I G+L L+ F + E++ D + K TC KC + K + K P V HL
Sbjct: 758 LPIPSRTGNLKLQQCLQHFVREEEL-DGDEKPTCSKCGVRRKCLKWFTVHKFPQVLVLHL 816
Query: 319 KRFKTDGSYVVKIDKHVEFPLE-LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHY 377
KRF + K+ VEFPL LD+ P+ + S Y+LYA+ H G++ GHY
Sbjct: 817 KRFSPTERFRGKLSVVVEFPLSGLDMSPFAA----SPTHATYNLYAVSNHSGTT-YSGHY 871
Query: 378 FSYIRSSPDT--WHRLNDSRVTRVEEEFVLSQDAYILFY 414
+Y + P T WH NDSRVT + ++S +AY+LFY
Sbjct: 872 TAYCK-HPYTGDWHEYNDSRVTPIRSRDIVSAEAYVLFY 909
>gi|345316872|ref|XP_003429803.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Ornithorhynchus
anatinus]
Length = 494
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 123/365 (33%), Positives = 170/365 (46%), Gaps = 55/365 (15%)
Query: 107 GAGLENLGNTCFINAILQ---------CFTHTLPLVQ------ALRSFDHPRPCDGATEG 151
GL NLGNTCF+NAILQ C+ LP V+ A R H R
Sbjct: 132 ATGLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRTYHTR--SQGDNN 189
Query: 152 FCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLE-- 209
++ R + S SP L + I F+ YQQ+DAHEF++ LLD L
Sbjct: 190 VSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE 249
Query: 210 ----------SCCLDSKT----KDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYE 255
S L + ++ + +V +FGG L +++ C CG+ S ++
Sbjct: 250 LQGGFNGVSRSVILQENSGLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFD 309
Query: 256 PLIDLSLEIED--------------VGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSV 301
P +DLSL+I + SL L SFT LE++++ E + C KCK++
Sbjct: 310 PFLDLSLDIPSQFRNKRSKNQENGPMCSLRDCLRSFTDLEELDETEL-YMCHKCKKKQKS 368
Query: 302 EKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE-LDLKPYTSGGQNSDVE-LKY 359
K+ + K+P V HLKRF K+D +VEFPL LD+K Y +NS E Y
Sbjct: 369 TKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPESCLY 428
Query: 360 HLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFY----A 415
L A+V H GS GHY +Y + W NDS VT +EE V+ AYILFY A
Sbjct: 429 DLAAVVVHHGSGVGSGHYTAYA-THEGRWFHFNDSTVTLTDEETVVKAKAYILFYVERQA 487
Query: 416 KQGTE 420
K G++
Sbjct: 488 KSGSD 492
>gi|449472093|ref|XP_002191422.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Taeniopygia
guttata]
Length = 640
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 126/366 (34%), Positives = 172/366 (46%), Gaps = 61/366 (16%)
Query: 109 GLENLGNTCFINAILQ---------CFTHTLPLVQ------ALRSFDHPRPCDGATEGFC 153
GL NLGNTCF+NAILQ C+ LP V+ A R H R
Sbjct: 280 GLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRTYHTR--SQGDNNVS 337
Query: 154 VICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLE---- 209
++ R + + SP L + I F+ YQQ+DAHEF++ LLD L
Sbjct: 338 LVEEFRKTLCALWQGNQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQ 397
Query: 210 --------SCCLDSKTKDESLSSQ-------GDNIVQRVFGGCLISKLQCCNCGSCSDTY 254
S L ++ SLS+ +V +FGG L +++ C CG+ S +
Sbjct: 398 GGFNGVSRSVILQ---ENSSLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKF 454
Query: 255 EPLIDLSLEI-----------EDVG---SLGSALESFTKLEKIEDPETKFTCEKCKEQVS 300
+P +DLSL+I ++ G +L L SFT LE++++ E + C KCK++
Sbjct: 455 DPFLDLSLDIPSQFRNKRTKNQESGPMCTLRDCLRSFTDLEELDETEL-YMCHKCKKKQK 513
Query: 301 VEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE-LDLKPYTSGGQNSDVE-LK 358
K+ + K+P V HLKRF K+D +VEFPL LD+K Y +NS E
Sbjct: 514 STKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPESCL 573
Query: 359 YHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFY---- 414
Y L A+V H GS GHY +Y + W NDS VT +EE V AYILFY
Sbjct: 574 YDLVAVVVHHGSGVGSGHYTAYA-AHEGRWFHFNDSTVTLTDEETVGKAKAYILFYVERQ 632
Query: 415 AKQGTE 420
AK G E
Sbjct: 633 AKPGAE 638
>gi|242024423|ref|XP_002432627.1| ubiquitin carboxyl-terminal hydrolase, putative [Pediculus humanus
corporis]
gi|212518097|gb|EEB19889.1| ubiquitin carboxyl-terminal hydrolase, putative [Pediculus humanus
corporis]
Length = 462
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 117/337 (34%), Positives = 169/337 (50%), Gaps = 37/337 (10%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCD---GATEGFCVICALRDHIELS 165
GL+N+GNTCF+N++LQC ++T PL++ L ++ + A +G +I A + I+
Sbjct: 123 GLKNIGNTCFMNSVLQCLSNTKPLLEYLLHEEYMTDINFTISAMKG-SLIKAFSNVIQEL 181
Query: 166 LASSG--KVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTK----- 218
A + K+++ + + F Y Q+DA EFL+ LL+ L K
Sbjct: 182 WAPNAEDKIINTTNFKSQIQKFAPRFMGYAQQDAQEFLRYLLEGLHEDVNRVTVKPQQIL 241
Query: 219 ---DESLSS-------------QGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSL 262
D+SLS D+ V +F G L S LQC CG CS T++P DLSL
Sbjct: 242 TDIDDSLSDNQKATEAWKRYLRMDDSKVVDIFVGQLKSTLQCTVCGHCSVTFDPFWDLSL 301
Query: 263 EIEDVGS---LGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLK 319
+ L S L++FTK E++ D E K TC KC+ + K + K P + HLK
Sbjct: 302 PVPSRTGQPKLQSCLDAFTK-EEVLDGEEKPTCSKCETRRKCTKSFSIQKFPKILVLHLK 360
Query: 320 RFKTDGSYVVKIDKHVEFPL-ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYF 378
RF Y K+ V+FPL LDL PY + N Y+LYAI H G++ GHY
Sbjct: 361 RFSPTERYRGKLSITVDFPLTNLDLSPYAA---NKGQGCTYNLYAISNHSGTA-YGGHYT 416
Query: 379 SYIRSS-PDTWHRLNDSRVTRVEEEFVLSQDAYILFY 414
+Y + WH NDSRV+ + V+S +AY+LFY
Sbjct: 417 AYCKHPYSGNWHEYNDSRVSSLSSRSVVSGEAYVLFY 453
>gi|449266379|gb|EMC77432.1| Ubiquitin carboxyl-terminal hydrolase 3, partial [Columba livia]
Length = 490
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 123/367 (33%), Positives = 170/367 (46%), Gaps = 59/367 (16%)
Query: 107 GAGLENLGNTCFINAILQ---------CFTHTLPLVQ------ALRSFDHPRPCDGATEG 151
GL NLGNTCF+NAILQ C+ LP V+ A R H R
Sbjct: 128 ATGLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRTYHTR--SQGDNN 185
Query: 152 FCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRL--- 208
++ R + S SP L + I F+ YQQ+DAHEF++ LLD L
Sbjct: 186 VSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE 245
Query: 209 ---------------ESCCLDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDT 253
E+ L + K + +V +FGG L +++ C CG+ S
Sbjct: 246 LQGGFNGVSRSVILQENATLSASNK--CCINGASTVVTAIFGGILQNEVNCLICGTESRK 303
Query: 254 YEPLIDLSLEIED--------------VGSLGSALESFTKLEKIEDPETKFTCEKCKEQV 299
++P +DLSL+I + +L L SFT LE++++ E + C KCK++
Sbjct: 304 FDPFLDLSLDIPSQFRNKRTKNQENGPMCTLRDCLRSFTDLEELDETEL-YMCHKCKKKQ 362
Query: 300 SVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE-LDLKPYTSGGQNSDVE-L 357
K+ + K+P V HLKRF K+D +VEFPL LD+K Y +NS E
Sbjct: 363 KSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPESC 422
Query: 358 KYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFY--- 414
Y L A+V H GS GHY +Y + W NDS VT +EE V+ AYILFY
Sbjct: 423 LYDLAAVVVHHGSGVGSGHYTAYA-AHEGRWFHFNDSTVTLTDEETVVKAKAYILFYVER 481
Query: 415 -AKQGTE 420
AK G++
Sbjct: 482 QAKSGSD 488
>gi|194212776|ref|XP_001501250.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Equus
caballus]
Length = 606
Score = 148 bits (374), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 117/338 (34%), Positives = 163/338 (48%), Gaps = 39/338 (11%)
Query: 108 AGLENLGNTCFINAILQCFTHTLPL----VQALRSFDHPRPCDGATEGFCVICALRDHIE 163
AGL NLGNTCF+N+ILQC ++T L +Q L D + T L I
Sbjct: 268 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHSSNAHTALMEEFAKLIQTIW 327
Query: 164 LSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLES----CCLDSKTKD 219
S S V+SP + + + F Y Q+DA EFL+ LLD L + + K+
Sbjct: 328 TS--SPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTVRPKSNP 385
Query: 220 ESLS----------------SQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE 263
E+L + D+ + +F G L S L C +CG CS ++P DLSL
Sbjct: 386 ENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLP 445
Query: 264 IEDVG----SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLK 319
I G +L + FTK E + D + K TC +C+ + K+ + + P + HLK
Sbjct: 446 IAKRGYPEVTLMDCMRLFTK-EDVLDGDEKPTCCRCRARKRCIKKFSIQRFPKILVLHLK 504
Query: 320 RFKTDGSYVVKIDKHVEFPL-ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYF 378
RF K+ V FPL +LDL+ + S N V Y+LYA+ H G++ GHY
Sbjct: 505 RFSESRIRTSKLTTFVNFPLRDLDLREFASENTNHAV---YNLYAVSNHSGTT-MGGHYT 560
Query: 379 SYIRSSPDT--WHRLNDSRVTRVEEEFVLSQDAYILFY 414
+Y R SP T WH NDS VT + V + DAY+LFY
Sbjct: 561 AYCR-SPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFY 597
>gi|296216400|ref|XP_002754520.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Callithrix
jacchus]
Length = 597
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 117/336 (34%), Positives = 164/336 (48%), Gaps = 44/336 (13%)
Query: 108 AGLENLGNTCFINAILQCFTHTLPLVQALRSF-DHPRPCDGATEGFCVICALRDHIELSL 166
AGL NLGNTCF+N+ILQC ++T + LR + H G ALR+
Sbjct: 268 AGLRNLGNTCFMNSILQCLSNT----RELRDYCLHRLYVRDLHHGSNAHTALRE------ 317
Query: 167 ASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLES----CCLDSKTKDESL 222
AS +V+SP + + + F Y Q+DA EFL+ LLD L + L K+ E+L
Sbjct: 318 ASPNEVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNPENL 377
Query: 223 S----------------SQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIED 266
+ D+ + +F G L S L C +CG CS ++P DLSL I
Sbjct: 378 DHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAK 437
Query: 267 VG----SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK 322
G +L + FTK E + D + K TC +C+ + K+ + + P + HLKRF
Sbjct: 438 RGYPEVTLMDCMRLFTK-EDVLDGDEKPTCCRCRGRKRCIKKFSIQRFPKILVLHLKRFS 496
Query: 323 TDGSYVVKIDKHVEFPL-ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYI 381
K+ V FPL +LDL+ + S N V Y+LYA+ H G++ GHY +Y
Sbjct: 497 ESRIRTSKLTTFVNFPLRDLDLREFASENTNHAV---YNLYAVSNHSGTT-MGGHYTAYS 552
Query: 382 R-SSPDT--WHRLNDSRVTRVEEEFVLSQDAYILFY 414
SP T WH NDS VT + V + DAY+LFY
Sbjct: 553 NCRSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLFY 588
>gi|363737872|ref|XP_413755.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Gallus gallus]
Length = 520
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 123/367 (33%), Positives = 171/367 (46%), Gaps = 59/367 (16%)
Query: 107 GAGLENLGNTCFINAILQ---------CFTHTLPLVQ------ALRSFDHPRPCDGATEG 151
GL NLGNTCF+NAILQ C+ LP V+ A R H R
Sbjct: 158 ATGLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRTYHTR--SQGDNN 215
Query: 152 FCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRL--- 208
++ R + S SP L + I F+ YQQ+DAHEF++ LLD L
Sbjct: 216 VSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE 275
Query: 209 ---------------ESCCLDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDT 253
E+ L + +K + +V +FGG L +++ C CG+ S
Sbjct: 276 LQGGFNGVSRSVILQENSSLTASSK--CCINGASTVVTAIFGGILQNEVNCLICGTESRK 333
Query: 254 YEPLIDLSLEIED--------------VGSLGSALESFTKLEKIEDPETKFTCEKCKEQV 299
++P +DLSL+I + +L L SFT LE++++ E + C KCK++
Sbjct: 334 FDPFLDLSLDIPSQFRNKRTKNQENGPMCTLRDCLRSFTDLEELDETEL-YMCHKCKKKQ 392
Query: 300 SVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE-LDLKPYTSGGQNSDVE-L 357
K+ + K+P V HLKRF K+D +VEFPL LD+K Y +NS E
Sbjct: 393 KSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPESC 452
Query: 358 KYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFY--- 414
Y L A+V H GS GHY +Y + W NDS VT +EE V+ AYILFY
Sbjct: 453 LYDLAAVVVHHGSGVGSGHYTAYA-AHEGRWFHFNDSTVTLTDEETVVKAKAYILFYVER 511
Query: 415 -AKQGTE 420
AK G++
Sbjct: 512 QAKSGSD 518
>gi|47215260|emb|CAF96987.1| unnamed protein product [Tetraodon nigroviridis]
Length = 535
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 112/375 (29%), Positives = 167/375 (44%), Gaps = 67/375 (17%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVIC-----------A 157
GL NLGNTCF+N I+Q THT PL++ D + C+ + C++C A
Sbjct: 165 GLINLGNTCFMNCIVQALTHT-PLLRDFFLSDRHK-CEMQSNS-CLVCEMSQLFQEVNAA 221
Query: 158 LRDH------------IELSLASSGKVLS-PRKLVDNLNYISSFFQRYQQEDAHEFLQCL 204
LR L S + P +L+ + + Y+Q+DAHEFL
Sbjct: 222 LRTRRTASFPPTQTHDFPLQFYSGHRSPHIPFRLLHLVWTHARHLAGYEQQDAHEFLIAA 281
Query: 205 LDRLESCCLDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEI 264
LD L C D K + + + I+ ++F G L S + C C S T +P D+SL++
Sbjct: 282 LDVLHRHCKDDNGKKANNPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDL 341
Query: 265 -------------------------EDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQV 299
+L L FT+ E + K C C
Sbjct: 342 PGSSTPFWPLSPGGDASALNGESHATGATTLTDCLRRFTRPEHL-GSSAKIKCSGCHSYQ 400
Query: 300 SVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV---- 355
KQL + K+P VA FHLKRF+ KI +V FPLELD+ P+ + + S +
Sbjct: 401 ESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQY 460
Query: 356 ---------ELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLS 406
+ KY L+A+V H G+ + GHY ++IR D W + +D+ +T+ + VL
Sbjct: 461 QQIVDPFNNDNKYSLFAVVNHQGTLES-GHYTTFIRQHKDQWFKCDDAIITKASIKDVLD 519
Query: 407 QDAYILFYAKQGTEW 421
+ Y+LFY KQ E+
Sbjct: 520 SEGYLLFYHKQFLEY 534
>gi|24643795|ref|NP_728456.1| CG14619, isoform B [Drosophila melanogaster]
gi|22832694|gb|AAN09567.1| CG14619, isoform B [Drosophila melanogaster]
Length = 337
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/338 (31%), Positives = 166/338 (49%), Gaps = 36/338 (10%)
Query: 105 GVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIEL 164
G GL N+GNTCF+N+++QC +HT L + LRS R +T+ ++ I+
Sbjct: 9 GSLCGLRNIGNTCFMNSVIQCLSHTQELTRFLRSHHGSRSL--STKDQQILHEFAKLIQE 66
Query: 165 SLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESL-- 222
++ ++P +L + + Y Q+DA EFL+ LD L S L+S K E+L
Sbjct: 67 MWTANVHTVTPMELKRAFSTKHRMYSDYNQQDAQEFLRFFLDSLHS-ALNSGVKGETLNI 125
Query: 223 -----------------SSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE 265
+ +++V+ +F G L S L+C CG+ S T++P DLS+ +
Sbjct: 126 DDNLSDNKKADLTWEWYTRHENSLVRDLFVGQLKSTLKCTTCGNTSVTFDPFWDLSVPLP 185
Query: 266 DVG--SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKT 323
L + L+ F + E++ D + TC KCK + K + + P HLKRF
Sbjct: 186 SSSRCKLEACLDLFIR-EEVLDGDEMPTCAKCKTRRKCTKSFTIQRFPKYLVIHLKRFSE 244
Query: 324 DGSYVVKIDKHVEFPL---ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSY 380
+ K+ VEFP EL++ Y G NS+ + Y LYAI HMGS+ GHY +
Sbjct: 245 --TRWSKLSNIVEFPTSDSELNMGSY---GANSNSNVHYSLYAISNHMGSTAG-GHYVAL 298
Query: 381 IRSSPD-TWHRLNDSRVT-RVEEEFVLSQDAYILFYAK 416
+ WH ND+ V+ + E ++S AYILFY +
Sbjct: 299 CKHPVSRKWHEFNDNIVSDALSENHLVSSSAYILFYER 336
>gi|431895934|gb|ELK05352.1| Ubiquitin carboxyl-terminal hydrolase 3 [Pteropus alecto]
Length = 520
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 123/365 (33%), Positives = 170/365 (46%), Gaps = 55/365 (15%)
Query: 107 GAGLENLGNTCFINAILQ---------CFTHTLPLVQ------ALRSFDHPRPCDGATEG 151
GL NLGNTCF+NAILQ C+ LP V+ A R H R
Sbjct: 158 ATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTR--SQGDNN 215
Query: 152 FCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLE-- 209
++ R + S SP L + I F+ YQQ+DAHEF++ LLD L
Sbjct: 216 VSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE 275
Query: 210 ----------SCCLDSKT----KDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYE 255
S L + ++ + +V +FGG L +++ C CG+ S ++
Sbjct: 276 LQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGFLQNEVNCLICGTESRKFD 335
Query: 256 PLIDLSLEIED--------------VGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSV 301
P +DLSL+I V SL L SFT LE++++ E + C KCK++
Sbjct: 336 PFLDLSLDIPSQFRNKRSKNQENGPVCSLRDCLRSFTDLEELDETEL-YMCHKCKKKQKS 394
Query: 302 EKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE-LDLKPYTSGGQNSDVE-LKY 359
K+ + K+P V HLKRF K+D +VEFPL LD+K Y +NS E Y
Sbjct: 395 TKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDIYVEFPLRGLDMKCYLLEPENSGPESCLY 454
Query: 360 HLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFY----A 415
L A+V H GS GHY +Y + W NDS VT +E+ V+ AYILFY A
Sbjct: 455 DLAAVVVHHGSGVGSGHYTAYA-THEGRWFHFNDSTVTLTDEDTVVKAKAYILFYVERQA 513
Query: 416 KQGTE 420
K G++
Sbjct: 514 KAGSD 518
>gi|340724718|ref|XP_003400728.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Bombus
terrestris]
gi|350398221|ref|XP_003485124.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Bombus
impatiens]
Length = 502
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/346 (30%), Positives = 163/346 (47%), Gaps = 42/346 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDH---PRPCDGATEGFCVICALRDHIELS 165
GL NLG+TCF+N I+Q HT PL++ D P+P C++C + +
Sbjct: 160 GLINLGSTCFMNCIVQALIHT-PLLRDYFLADRHHCPQPTR------CLVCEVSHLFQEF 212
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
+ S L+ KL+ + + Y+Q+DAHEF LD L C + +
Sbjct: 213 YSGSKAPLTLHKLLHLIWTHARHLAGYEQQDAHEFFIATLDVLHRHCEAAPILVKDNPHH 272
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVG------------SLGSA 273
+ I+ ++F G L S + C C S T +P D+SL++ SL
Sbjct: 273 CNCIIDQIFTGGLQSDVVCQACNGVSTTIDPFWDISLDLGPAASASGSDSSGPPTSLLDC 332
Query: 274 LESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDK 333
LE FT+ E + K C C+ KQL + ++P VA+FHLKRF+ KI
Sbjct: 333 LERFTRAEHL-GSSAKIKCSNCQTYQESTKQLTMKQLPIVASFHLKRFEHSSIQDKKICT 391
Query: 334 HVEFPLELDLKPYTS----GGQNSDV--------------ELKYHLYAIVEHMGSSPTCG 375
+ FP +LD+ P+ S G NS + + +Y L+A++ H GS T G
Sbjct: 392 FISFPEQLDMTPFMSHRRNGNNNSAMIDGLPKNGEDMAFSDNRYSLFAVINHEGSLET-G 450
Query: 376 HYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
HY ++IR D W + +D +TR + VL+ + Y+LFY KQ E+
Sbjct: 451 HYTAFIRQQRDQWFKCDDHLITRARLKDVLTSEGYLLFYHKQILEY 496
>gi|410972085|ref|XP_003992491.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Felis catus]
Length = 606
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 117/343 (34%), Positives = 166/343 (48%), Gaps = 49/343 (14%)
Query: 108 AGLENLGNTCFINAILQCFTHTLPL----VQALRSFDHPRPCDGATEGFCVICALRDHIE 163
AGL NLGNTCF+N+ILQC ++T L +Q L D + G V AL +
Sbjct: 268 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRD-------LSHGSSVHTALMEEFA 320
Query: 164 -----LSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLES----CCLD 214
+ +S V+SP + + + F Y Q+DA EFL+ LLD L + +
Sbjct: 321 KLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTVR 380
Query: 215 SKTKDESLS----------------SQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLI 258
K+ E+L + D+ + +F G L S L C +CG CS ++P
Sbjct: 381 PKSNPENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFW 440
Query: 259 DLSLEIEDVG----SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVA 314
DLSL I G +L + FTK E + D + K TC +C+ + K+ + + P +
Sbjct: 441 DLSLPIAKRGYPEVTLMDCMRLFTK-EDVLDGDEKPTCCRCRARKRCIKKFSIQRFPKIL 499
Query: 315 AFHLKRFKTDGSYVVKIDKHVEFPL-ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPT 373
HLKRF K+ V FPL +LDL+ + S N V Y+LYA+ H G++
Sbjct: 500 VLHLKRFSESRIRTSKLTTFVNFPLRDLDLREFASENTNHAV---YNLYAVSNHSGTT-M 555
Query: 374 CGHYFSYIRSSPDT--WHRLNDSRVTRVEEEFVLSQDAYILFY 414
GHY +Y R SP T WH NDS VT + V + DAY+LFY
Sbjct: 556 GGHYTAYCR-SPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFY 597
>gi|114152901|sp|O88623.2|UBP2_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 2; AltName:
Full=41 kDa ubiquitin-specific protease; AltName:
Full=Deubiquitinating enzyme 2; AltName: Full=Ubiquitin
thioesterase 2; AltName:
Full=Ubiquitin-specific-processing protease 2
gi|34874927|gb|AAQ83303.1| deubiquitinating enzyme Usp2-69 [Mus musculus]
Length = 613
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 118/338 (34%), Positives = 160/338 (47%), Gaps = 39/338 (11%)
Query: 108 AGLENLGNTCFINAILQCFTHTLPL----VQALRSFDHPRPCDGATEGFCVICALRDHIE 163
AGL NLGNTCF+N+ILQC ++T L +Q L D T L I
Sbjct: 275 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLGHTSSAHTALMEEFAKLIQTIW 334
Query: 164 LSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLES----CCLDSKTKD 219
S S V+SP + + + F Y Q+DA EFL+ LLD L + K
Sbjct: 335 TS--SPNDVVSPSEFKTQIQRYAPRFMGYNQQDAQEFLRFLLDGLHNEVNRVAARPKASP 392
Query: 220 ESLS----------------SQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE 263
E+L + D+ + +F G L S L C +CG CS ++P DLSL
Sbjct: 393 ETLDHLPDEEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLP 452
Query: 264 IEDVG----SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLK 319
I G +L + FTK E I D + K TC +C+ + K+ + + P + HLK
Sbjct: 453 IAKRGYPEVTLMDCMRLFTK-EDILDGDEKPTCCRCRARKRCIKKFSVQRFPKILVLHLK 511
Query: 320 RFKTDGSYVVKIDKHVEFPL-ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYF 378
RF K+ V FPL +LDL+ + S N V Y+LYA+ H G++ GHY
Sbjct: 512 RFSESRIRTSKLTTFVNFPLRDLDLREFASENTNHAV---YNLYAVSNHSGTT-MGGHYT 567
Query: 379 SYIRSSPDT--WHRLNDSRVTRVEEEFVLSQDAYILFY 414
+Y R SP T WH NDS VT + V + DAY+LFY
Sbjct: 568 AYCR-SPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFY 604
>gi|327290078|ref|XP_003229751.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 2-like, partial [Anolis carolinensis]
Length = 666
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 112/336 (33%), Positives = 158/336 (47%), Gaps = 34/336 (10%)
Query: 108 AGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATE-GFCVICALRDHIE-LS 165
GL NLGNTCF+N+ILQC ++T L + R + + ++ I+ L
Sbjct: 327 TGLRNLGNTCFMNSILQCLSNTKELRDYCLQNQYVRDLNNNSRMQMNLMAEFAKLIQALW 386
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCC------------- 212
+S + +SP + + + F Y Q+DA EFL+ LLD L S
Sbjct: 387 TSSPNESVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHSEVNRILVRPKGGSSD 446
Query: 213 -LDSKTKDES-------LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEI 264
LD +E ++ D+ + +F G L S L C CG CS ++P DLSL I
Sbjct: 447 SLDHLPDEEKGRQMWMRYLAREDSRIGDLFVGQLKSSLTCSVCGHCSTAFDPFWDLSLPI 506
Query: 265 EDVG----SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKR 320
+L L FTK E I D + K TC CK + K+ + + P + HLKR
Sbjct: 507 AKKSYGEVNLADCLRLFTK-EDILDGDEKPTCCHCKARTKCTKKFSIQRFPKILVLHLKR 565
Query: 321 FKTDGSYVVKIDKHVEFPL-ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFS 379
F K+ V FPL +LDL+ + S N V Y+LYA+ H G++ GHY +
Sbjct: 566 FSEARIRSSKLTTFVNFPLKDLDLREFASQSCNHAV---YNLYAVSNHSGTT-MGGHYTA 621
Query: 380 YIRSS-PDTWHRLNDSRVTRVEEEFVLSQDAYILFY 414
Y ++ WH NDSRVT + V S DAY+LFY
Sbjct: 622 YCKNPVSGEWHAFNDSRVTPLSASHVRSSDAYLLFY 657
>gi|328784869|ref|XP_392493.4| PREDICTED: hypothetical protein LOC408964 [Apis mellifera]
Length = 987
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/339 (32%), Positives = 163/339 (48%), Gaps = 36/339 (10%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGF--CVICALRDHI-ELS 165
GL N+GNTCF+N+++QC ++T PL++ L + + + T +I A I EL
Sbjct: 649 GLRNIGNTCFMNSVIQCLSNTRPLLEYLLNEQYLADINTTTSSMKGALIKAFSQVIHELW 708
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLES--------------- 210
V++ L + + F Y Q+DA EFL+ LL+ L
Sbjct: 709 EVGGDLVVNTTALKSQIQRFAPRFMGYSQQDAQEFLRYLLEGLHEDVNRVTVKPQPIHTD 768
Query: 211 ---CCLDSKTKDES----LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE 263
DS+ ES L S+ D+++ VF G L S L C +C S T +P DLSL
Sbjct: 769 IPEMYTDSQKAVESWKRYLRSE-DSMIVDVFVGQLRSSLHCTSCDHVSVTLDPFWDLSLP 827
Query: 264 I---EDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKR 320
I L LE FT+ E++ D + K TC KC+ + K + K P + HLKR
Sbjct: 828 IPARSGTVKLSQCLEHFTR-EEVLDGDEKPTCSKCQMRRKCTKSFSIQKFPKILVIHLKR 886
Query: 321 FKTDGSYVVKIDKHVEFPLE-LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFS 379
F + K++ V+FPL LDL + + Y+LY + H G++ + GHY +
Sbjct: 887 FSPMERFRSKLNVMVDFPLTGLDLSAFAAPRVPG---CTYNLYGVANHSGTTHS-GHYTA 942
Query: 380 YIRSSPDT-WHRLNDSRVTRVEEEFVLSQDAYILFYAKQ 417
Y + WH NDSRV+ V V+S +AY+LFY +Q
Sbjct: 943 YCKHPYSAEWHEYNDSRVSAVPARSVVSNEAYVLFYEQQ 981
>gi|350424674|ref|XP_003493875.1| PREDICTED: hypothetical protein LOC100741560 [Bombus impatiens]
Length = 979
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 110/339 (32%), Positives = 164/339 (48%), Gaps = 36/339 (10%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGF--CVICALRDHI-ELS 165
GL N+GNTCF+N+++QC ++T PL++ L + + + +T +I A I EL
Sbjct: 641 GLRNIGNTCFMNSVIQCLSNTRPLLEYLLNEQYLADINTSTSSMKGALIKAFSQVIHELW 700
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLES--------------- 210
V++ L + + F Y Q+DA EFL+ LL+ L
Sbjct: 701 EVGGDLVVNTTALKSQIQRFAPRFMGYSQQDAQEFLRYLLEGLHEDVNRVTVKPQPIHTD 760
Query: 211 ---CCLDSKTKDES----LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE 263
DS+ ES L S+ D+++ VF G L S L C +C S T +P DLSL
Sbjct: 761 IPEMYTDSQKAVESWKRYLRSE-DSMIVDVFVGQLRSSLHCTSCDHVSVTLDPFWDLSLP 819
Query: 264 I---EDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKR 320
I L LE FT+ E++ D + K TC KC+ + K + K P + HLKR
Sbjct: 820 IPARSGTVKLSQCLEHFTR-EEVLDGDEKPTCSKCQMRRKCTKSFSIQKFPKILVIHLKR 878
Query: 321 FKTDGSYVVKIDKHVEFPLE-LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFS 379
F + K++ V+FPL LDL + + Y+LY + H G++ + GHY +
Sbjct: 879 FSPMERFRSKLNVMVDFPLTGLDLSAFAA---PRVPGCTYNLYGVANHSGTTHS-GHYTA 934
Query: 380 YIRSS-PDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQ 417
Y + WH NDSRV+ V V+S +AY+LFY +Q
Sbjct: 935 YCKHPYSGEWHEYNDSRVSVVPARSVVSNEAYVLFYEQQ 973
>gi|340727179|ref|XP_003401926.1| PREDICTED: hypothetical protein LOC100649397 [Bombus terrestris]
Length = 977
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 110/339 (32%), Positives = 164/339 (48%), Gaps = 36/339 (10%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGF--CVICALRDHI-ELS 165
GL N+GNTCF+N+++QC ++T PL++ L + + + +T +I A I EL
Sbjct: 639 GLRNIGNTCFMNSVIQCLSNTRPLLEYLLNEQYLADINTSTSSMKGALIKAFSQVIHELW 698
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLES--------------- 210
V++ L + + F Y Q+DA EFL+ LL+ L
Sbjct: 699 EVGGDLVVNTTALKSQIQRFAPRFMGYSQQDAQEFLRYLLEGLHEDVNRVTVKPQPIHTD 758
Query: 211 ---CCLDSKTKDES----LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE 263
DS+ ES L S+ D+++ VF G L S L C +C S T +P DLSL
Sbjct: 759 IPEMYTDSQKAVESWKRYLRSE-DSMIVDVFVGQLRSSLHCTSCDHVSVTLDPFWDLSLP 817
Query: 264 I---EDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKR 320
I L LE FT+ E++ D + K TC KC+ + K + K P + HLKR
Sbjct: 818 IPARSGTVKLSQCLEHFTR-EEVLDGDEKPTCSKCQMRRKCTKSFSIQKFPKILVIHLKR 876
Query: 321 FKTDGSYVVKIDKHVEFPLE-LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFS 379
F + K++ V+FPL LDL + + Y+LY + H G++ + GHY +
Sbjct: 877 FSPMERFRSKLNVMVDFPLTGLDLSAFAA---PRVPGCTYNLYGVANHSGTTHS-GHYTA 932
Query: 380 YIRSS-PDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQ 417
Y + WH NDSRV+ V V+S +AY+LFY +Q
Sbjct: 933 YCKHPYSGEWHEYNDSRVSVVPARSVVSNEAYVLFYEQQ 971
>gi|47225852|emb|CAF98332.1| unnamed protein product [Tetraodon nigroviridis]
Length = 511
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 118/358 (32%), Positives = 166/358 (46%), Gaps = 59/358 (16%)
Query: 109 GLENLGNTCFINAILQ---------CFTHTLPLVQ------ALRSFDHPRPCDGATEGFC 153
GL NLGNTCF+NAILQ C+ LP V A R H R
Sbjct: 160 GLRNLGNTCFMNAILQSLSNIEQFSCYFKELPAVSLRSGKTAGRRMYHTR--SQGESSVS 217
Query: 154 VICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL 213
++ R + S SP L + I F+ YQQ+DAHEF++ LLD L
Sbjct: 218 LVEEFRKTLCSLWQGSQTAFSPDSLFYTIWKIMPSFRGYQQQDAHEFMRYLLDHLHRELQ 277
Query: 214 DSKTKDESLSSQGD-----------------NIVQRVFGGCLISKLQCCNCGSCSDTYEP 256
+S+ +S D ++V +FGG L +++ C CG+ S ++P
Sbjct: 278 NSRNGASHTASPQDGVRLTAADGKCCINGTASVVTSIFGGILQNEVNCLICGTESRKFDP 337
Query: 257 LIDLSLEI-----------EDVG---SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVE 302
+DLSL+I ++ G +L L SFT LE+++D E F C KCK++
Sbjct: 338 FLDLSLDIPSQFRQKRSKDQEPGPTCTLSDCLRSFTDLEELDDTELYF-CHKCKKRQKST 396
Query: 303 KQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE-LDLKPYTSGGQNSDVE-LKYH 360
K+ + K+P V HLKRF KID +VEFPL+ LD++ Y +NS E Y
Sbjct: 397 KKFWVQKLPKVLCLHLKRFHWTAFLRNKIDTYVEFPLKGLDMRGYLLEPENSLPESCVYD 456
Query: 361 LYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQG 418
L A+ +SP+ + S D W+ NDS VT E+ V AYILFY ++
Sbjct: 457 LVAV-----ASPSMDLAYG---SHEDRWYHFNDSTVTLTSEDAVRKAKAYILFYVERA 506
>gi|242005524|ref|XP_002423614.1| ubiquitin carboxyl-terminal hydrolase, putative [Pediculus humanus
corporis]
gi|212506774|gb|EEB10876.1| ubiquitin carboxyl-terminal hydrolase, putative [Pediculus humanus
corporis]
Length = 477
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/331 (32%), Positives = 162/331 (48%), Gaps = 24/331 (7%)
Query: 101 IKPTGVGA-GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATE-GFCVICAL 158
++ T +G GL NLGNTCF+N I+Q HT PL++ DH C A + G C++C L
Sbjct: 151 LENTTIGLRGLINLGNTCFMNCIVQALMHT-PLLRNYFLADH-HVCQLADQPGNCLVCEL 208
Query: 159 RDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTK 218
+ + L+ KL+ + + Y+Q+DAHEF LD L C T+
Sbjct: 209 SRLYQEFYSGKKNPLTLHKLLHLIWNQARHLAGYEQQDAHEFFIATLDVLHRHC--EATQ 266
Query: 219 DESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEI-EDVGSLGS----- 272
S ++ I+ ++F G L S + C +C + S T +P D+SL++ + VG GS
Sbjct: 267 KSSNPAKCSCIIDQIFTGGLQSDVVCQSCNNVSTTIDPFWDISLDLGQSVGLSGSEPKSL 326
Query: 273 --ALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVK 330
LE FT+ E + K C CK KQL + K+P VA+FHLKRF+ K
Sbjct: 327 VDCLERFTRAEHL-GSTAKIKCNNCKNYQESTKQLTMKKLPVVASFHLKRFEHSTRLHKK 385
Query: 331 IDKHVEFPLELDLKPYTSGGQNSDV--------ELKYHLYAIVEHMGSSPTCGHYFSYIR 382
I + FP LD+ P+ S +N Y L+A++ H+GS GHY +++R
Sbjct: 386 ISTFISFPEHLDMTPFMSHQRNLGGNGNLNNPSAYMYSLFAVINHVGSLDA-GHYTAFVR 444
Query: 383 SSPDTWHRLNDSRVTRVEEEFVLSQDAYILF 413
+ W + +D +TR VL+ +L
Sbjct: 445 QQKNHWFKCDDHLITRANLNDVLTNKRGLLL 475
>gi|302784140|ref|XP_002973842.1| hypothetical protein SELMODRAFT_100312 [Selaginella moellendorffii]
gi|300158174|gb|EFJ24797.1| hypothetical protein SELMODRAFT_100312 [Selaginella moellendorffii]
Length = 572
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 174/365 (47%), Gaps = 61/365 (16%)
Query: 103 PTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHI 162
P G+ GL N+G+TCF+N++LQ HT PL H + C+ C + D
Sbjct: 181 PLGL-RGLTNMGSTCFMNSVLQALLHTPPLRSYFLGHCHNKA--ACQSKVCLGCDMDDMF 237
Query: 163 ELSLASSGKVLSP-----RKLVDNLNYISSFFQR------YQQEDAHEFLQCLLDRLESC 211
+ + SP R+ + ++++S++Q Y+Q+DAH+F + +E
Sbjct: 238 AAAFSGDRTPYSPAQFLYRRYLFLFSFLNSWWQHAANLAGYEQQDAHDFF---ISAVEG- 293
Query: 212 CLDSKTKDESLSSQGDN----IVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDV 267
+ + ++ L D IV RVF G L S + C CG S +P +D+SL++E
Sbjct: 294 -IHANSQQPELRKGNDAECRCIVHRVFSGLLRSDVTCTACGFTSTKNDPCVDISLDLEST 352
Query: 268 G----------SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFH 317
+L L+ FT+ E++ E +F CE C+ + KQ+ + K+P V FH
Sbjct: 353 ALEKQIYASSSTLLGCLDRFTRPERLGSNE-RFFCESCQSRQEAVKQMSVRKLPVVLCFH 411
Query: 318 LKRFKTDGSYVVKIDKHVEFPLELDLKPYTS---------------------GGQN---- 352
+KRF+ K+D +V+FPL L++ Y S GG N
Sbjct: 412 VKRFEHSAKNYRKVDTYVQFPLSLNMACYLSSSIARLRHGNRLIFVEGKGELGGDNDSGS 471
Query: 353 SDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYIL 412
+ ++ L+A+V H G GHY +Y+R + W++ +D+ +TRV E V + AY+L
Sbjct: 472 TSPSSEFELFAVVSHSGKLDG-GHYVAYLRLGGE-WYKCDDAWITRVGESVVRATQAYML 529
Query: 413 FYAKQ 417
+Y ++
Sbjct: 530 YYVQR 534
>gi|395848444|ref|XP_003796860.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Otolemur
garnettii]
Length = 606
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 118/341 (34%), Positives = 164/341 (48%), Gaps = 45/341 (13%)
Query: 108 AGLENLGNTCFINAILQCFTHTLPL----VQAL--RSFDHPRPCDGATEGFCVICALRDH 161
AGL NLGNTCF+N+ILQC ++T L +Q L R H G++ ++
Sbjct: 268 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSH-----GSSAHTALMEEFAKL 322
Query: 162 IELSLASS-GKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCC-------- 212
I+ SS V+SP + + + F Y Q+DA EFL+ LLD L +
Sbjct: 323 IQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVAPRPK 382
Query: 213 -----LDSKTKDESLSSQGDNIVQR-------VFGGCLISKLQCCNCGSCSDTYEPLIDL 260
LD DE ++R +F G L S L C +CG CS ++P DL
Sbjct: 383 SNPENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDL 442
Query: 261 SLEIEDVG----SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAF 316
SL I G +L + FTK E + D + K TC +C+ + K+ + + P +
Sbjct: 443 SLPIAKRGYPEVTLMDCMRLFTK-EDVLDGDEKPTCCRCRARKRCIKKFSIQRFPKILVL 501
Query: 317 HLKRFKTDGSYVVKIDKHVEFPL-ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCG 375
HLKRF K+ V FPL +LDL+ + S N V Y+LYA+ H G++ G
Sbjct: 502 HLKRFSESRIRTSKLTTFVNFPLRDLDLREFASENTNHAV---YNLYAVSNHSGTT-MGG 557
Query: 376 HYFSYIRSSPDT--WHRLNDSRVTRVEEEFVLSQDAYILFY 414
HY +Y R SP T WH NDS VT + V + DAY+LFY
Sbjct: 558 HYTAYCR-SPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFY 597
>gi|114052498|ref|NP_932760.2| ubiquitin carboxyl-terminal hydrolase 2 isoform Usp2-69 [Mus
musculus]
gi|114052502|ref|NP_058088.2| ubiquitin carboxyl-terminal hydrolase 2 isoform Usp2-69 [Mus
musculus]
gi|17028406|gb|AAH17517.1| Ubiquitin specific peptidase 2 [Mus musculus]
gi|34874899|gb|AAQ83302.1| deubiquitinating enzyme Usp2-69 [Mus musculus]
gi|34874937|gb|AAQ83304.1| deubiquitinating enzyme Usp2-69 [Mus musculus]
gi|74218334|dbj|BAE23782.1| unnamed protein product [Mus musculus]
Length = 619
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 118/338 (34%), Positives = 160/338 (47%), Gaps = 39/338 (11%)
Query: 108 AGLENLGNTCFINAILQCFTHTLPL----VQALRSFDHPRPCDGATEGFCVICALRDHIE 163
AGL NLGNTCF+N+ILQC ++T L +Q L D T L I
Sbjct: 281 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLGHTSSAHTALMEEFAKLIQTIW 340
Query: 164 LSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLES----CCLDSKTKD 219
S S V+SP + + + F Y Q+DA EFL+ LLD L + K
Sbjct: 341 TS--SPNDVVSPSEFKTQIQRYAPRFMGYNQQDAQEFLRFLLDGLHNEVNRVAARPKASP 398
Query: 220 ESLS----------------SQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE 263
E+L + D+ + +F G L S L C +CG CS ++P DLSL
Sbjct: 399 ETLDHLPDEEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLP 458
Query: 264 IEDVG----SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLK 319
I G +L + FTK E I D + K TC +C+ + K+ + + P + HLK
Sbjct: 459 IAKRGYPEVTLMDCMRLFTK-EDILDGDEKPTCCRCRARKRCIKKFSVQRFPKILVLHLK 517
Query: 320 RFKTDGSYVVKIDKHVEFPL-ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYF 378
RF K+ V FPL +LDL+ + S N V Y+LYA+ H G++ GHY
Sbjct: 518 RFSESRIRTSKLTTFVNFPLRDLDLREFASENTNHAV---YNLYAVSNHSGTT-MGGHYT 573
Query: 379 SYIRSSPDT--WHRLNDSRVTRVEEEFVLSQDAYILFY 414
+Y R SP T WH NDS VT + V + DAY+LFY
Sbjct: 574 AYCR-SPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFY 610
>gi|73954632|ref|XP_859639.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 isoform 2 [Canis
lupus familiaris]
Length = 606
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 117/338 (34%), Positives = 163/338 (48%), Gaps = 39/338 (11%)
Query: 108 AGLENLGNTCFINAILQCFTHTLPL----VQALRSFDHPRPCDGATEGFCVICALRDHIE 163
AGL NLGNTCF+N+ILQC ++T L +Q L D + T L I
Sbjct: 268 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHSSNVHTALMEEFAKLIQTIW 327
Query: 164 LSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLES----CCLDSKTKD 219
S S V+SP + + + F Y Q+DA EFL+ LLD L + + K+
Sbjct: 328 TS--SPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTVRPKSNP 385
Query: 220 ESLS----------------SQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE 263
E+L + D+ + +F G L S L C +CG CS ++P DLSL
Sbjct: 386 ENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLP 445
Query: 264 IEDVG----SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLK 319
I G +L + FTK E + D + K TC +C+ + K+ + + P + HLK
Sbjct: 446 IAKRGYPEVTLTDCMRLFTK-EDVLDGDEKPTCCRCRARKRCIKKFSIQRFPKILVLHLK 504
Query: 320 RFKTDGSYVVKIDKHVEFPL-ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYF 378
RF K+ V FPL +LDL+ + S N V Y+LYA+ H G++ GHY
Sbjct: 505 RFSESRIRTSKLTTFVNFPLRDLDLREFASENTNHAV---YNLYAVSNHSGTT-MGGHYT 560
Query: 379 SYIRSSPDT--WHRLNDSRVTRVEEEFVLSQDAYILFY 414
+Y R SP T WH NDS VT + V + DAY+LFY
Sbjct: 561 AYCR-SPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFY 597
>gi|426244688|ref|XP_004016152.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 isoform 1 [Ovis
aries]
gi|426244690|ref|XP_004016153.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 isoform 2 [Ovis
aries]
Length = 606
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 116/341 (34%), Positives = 159/341 (46%), Gaps = 45/341 (13%)
Query: 108 AGLENLGNTCFINAILQCFTHTLPLVQ------ALRSFDH-PRPCDGATEGFCVICALRD 160
AGL NLGNTCF+N+ILQC ++T L LR H R E F +
Sbjct: 268 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYLRDLSHSSRAHTALMEEFAKLIQ--- 324
Query: 161 HIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCC-------- 212
+ +S V+SP + + + F Y Q+DA EFL+ LLD L +
Sbjct: 325 --TIWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTARPK 382
Query: 213 -----LDSKTKDESLSSQGDNIVQR-------VFGGCLISKLQCCNCGSCSDTYEPLIDL 260
LD DE ++R +F G L S L C +CG CS ++P DL
Sbjct: 383 SNTENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDL 442
Query: 261 SLEIEDVG----SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAF 316
SL I G +L + FTK E + D + K TC C+ + K+ + + P +
Sbjct: 443 SLPITKRGYPEVTLMDCMRLFTK-EDVLDGDEKPTCCHCRARKRCIKKFSIQRFPKILVL 501
Query: 317 HLKRFKTDGSYVVKIDKHVEFPL-ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCG 375
HLKRF K+ V FPL +LDL+ + S N V Y+LYA+ H G++ G
Sbjct: 502 HLKRFSESRIRTSKLTAFVNFPLRDLDLREFASENTNHAV---YNLYAVSNHSGTT-MGG 557
Query: 376 HYFSYIRSSPDT--WHRLNDSRVTRVEEEFVLSQDAYILFY 414
HY +Y R SP T WH NDS V+ + V + DAY+LFY
Sbjct: 558 HYTAYCR-SPVTGEWHTFNDSSVSPMSSSQVRTSDAYLLFY 597
>gi|380020720|ref|XP_003694227.1| PREDICTED: uncharacterized protein LOC100870505 [Apis florea]
Length = 1055
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 110/339 (32%), Positives = 163/339 (48%), Gaps = 36/339 (10%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGF--CVICALRDHI-ELS 165
GL N+GNTCF+N+++QC ++T PL++ L + + + T +I A I EL
Sbjct: 717 GLRNIGNTCFMNSVIQCLSNTRPLLEYLLNEQYLADINTTTSSMKGALIKAFSQVIHELW 776
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLES--------------- 210
V++ L + + F Y Q+DA EFL+ LL+ L
Sbjct: 777 EVGGDLVVNTTALKSQIQRFAPRFMGYSQQDAQEFLRYLLEGLHEDVNRVTVKPQPIHTD 836
Query: 211 ---CCLDSKTKDES----LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE 263
DS+ ES L S+ D+++ VF G L S L C +C S T +P DLSL
Sbjct: 837 IPEMYTDSQKAVESWKRYLRSE-DSMIVDVFVGQLRSSLHCTSCDHVSVTLDPFWDLSLP 895
Query: 264 I---EDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKR 320
I L LE FT+ E++ D + K TC KC+ + K + K P + HLKR
Sbjct: 896 IPARSGTVKLSQCLEHFTR-EEVLDGDEKPTCSKCQMRRKCTKSFSIQKFPKILVIHLKR 954
Query: 321 FKTDGSYVVKIDKHVEFPLE-LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFS 379
F + K++ V+FPL LDL + + Y+LY + H G++ + GHY +
Sbjct: 955 FSPMERFRSKLNVMVDFPLTGLDLSAFAAPRVPG---CTYNLYGVANHSGTTHS-GHYTA 1010
Query: 380 YIRSSPDT-WHRLNDSRVTRVEEEFVLSQDAYILFYAKQ 417
Y + WH NDSRV+ V V+S +AY+LFY +Q
Sbjct: 1011 YCKHPYSAEWHEYNDSRVSAVPARSVVSNEAYVLFYEQQ 1049
>gi|255548704|ref|XP_002515408.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
gi|223545352|gb|EEF46857.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
Length = 551
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/356 (29%), Positives = 176/356 (49%), Gaps = 49/356 (13%)
Query: 103 PTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPC--DGATEGFCVICALRD 160
P G+ GL NLG+TCF+N++LQ H P S H R + + C+ C + D
Sbjct: 175 PLGL-RGLNNLGSTCFMNSVLQALLHAPPFRNYFLSDRHDRDTCRKRSLDRLCLACNI-D 232
Query: 161 HIELSLASSGKV-LSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKD 219
I +L S + SP + + + S+ Y+Q+DAHEF LLD + + +T +
Sbjct: 233 VIISALYSGDRTPYSPAQFLYSWWQHSANLASYEQQDAHEFFIALLDGIHESEGNGRTPN 292
Query: 220 ESLSSQGDN--IVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEI------------- 264
+ GD I RVF G L S + C CG S TY+P +D+SL++
Sbjct: 293 KD---NGDCQCIAHRVFSGRLRSDVTCMTCGFTSTTYDPCVDISLDMDTSMSSTDVPNKS 349
Query: 265 ----EDVG--SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHL 318
E+ G +L + L+ FT+ EK+ + K C+ C+E+ KQ+ + ++P V + H+
Sbjct: 350 VRPNENAGKCTLSACLDLFTRPEKL-GSDQKLYCQNCEEKRDSFKQMSIKRLPLVLSLHI 408
Query: 319 KRFKTDGSYVV--KIDKHVEFPLELDLKPYTSG---------------GQNSDVELKYHL 361
KRF+ + KID H++FP LD+ Y S +D ++ +
Sbjct: 409 KRFEHSPVRKLSRKIDWHLQFPFSLDMTSYLSSSILRKRFGNRIFAFDSDEADTSAEFEI 468
Query: 362 YAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQ 417
+A++ H G + GHY +Y+R + W++ +D+ +T V+E V + Y++FY ++
Sbjct: 469 FAVITHSGMLES-GHYVTYLRLR-NQWYKCDDAWITEVDETIVRASQCYMIFYVQK 522
>gi|403262562|ref|XP_003923645.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Saimiri
boliviensis boliviensis]
Length = 606
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 118/338 (34%), Positives = 160/338 (47%), Gaps = 39/338 (11%)
Query: 108 AGLENLGNTCFINAILQCFTHTLPL----VQALRSFDHPRPCDGATEGFCVICALRDHIE 163
AGL NLGNTCF+N+ILQC ++T L +Q L D + T L I
Sbjct: 268 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYVRDLHHSSNAHTALVEEFAKLIQTIW 327
Query: 164 LSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCC----------- 212
S S V+SP + + + F Y Q+DA EFL+ LLD L +
Sbjct: 328 TS--SPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVAPRPKSNP 385
Query: 213 --LDSKTKDESLSSQGDNIVQR-------VFGGCLISKLQCCNCGSCSDTYEPLIDLSLE 263
LD DE ++R +F G L S L C +CG CS ++P DLSL
Sbjct: 386 ENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLP 445
Query: 264 IEDVG----SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLK 319
I G +L + FTK E + D + K TC +C+ + K+ + + P + HLK
Sbjct: 446 IAKRGYPEVTLMDCMRLFTK-EDVLDGDEKPTCCRCRARKRCIKKFSIQRFPKILVLHLK 504
Query: 320 RFKTDGSYVVKIDKHVEFPL-ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYF 378
RF K+ V FPL +LDL+ + S N V Y+LYA+ H G++ GHY
Sbjct: 505 RFSESRIRTSKLTTFVNFPLRDLDLREFASENTNHAV---YNLYAVSNHSGTT-MGGHYT 560
Query: 379 SYIRSSPDT--WHRLNDSRVTRVEEEFVLSQDAYILFY 414
+Y R SP T WH NDS VT + V + DAY+LFY
Sbjct: 561 AYCR-SPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLFY 597
>gi|348574067|ref|XP_003472812.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 1
[Cavia porcellus]
Length = 611
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 119/346 (34%), Positives = 167/346 (48%), Gaps = 46/346 (13%)
Query: 103 PTGVGAGLENLGNTCFINAILQCFTHTLPL----VQAL--RSFDHPRPC-DGATEGFCVI 155
P G+ AGL NLGNTCF+N+ILQC ++T L +Q L R H G E F +
Sbjct: 269 PQGL-AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHTSSVHTGLMEEFAKL 327
Query: 156 CALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLES----C 211
+ + V+SP + + + F Y Q+DA EFL+ LLD L +
Sbjct: 328 IQ-----TIWTSCPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRV 382
Query: 212 CLDSKTKDESLS----------------SQGDNIVQRVFGGCLISKLQCCNCGSCSDTYE 255
+ K+ E+L + D+ + +F G L S L C +CG CS ++
Sbjct: 383 AVRPKSSHENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFD 442
Query: 256 PLIDLSLEIEDVG----SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVP 311
P DLSL I G +L + FTK E I D + K TC +C+ + K+ + + P
Sbjct: 443 PFWDLSLPIAKRGYPEVTLMDCMRLFTK-EDILDGDEKPTCCRCRARKRCIKKFSIQRFP 501
Query: 312 SVAAFHLKRFKTDGSYVVKIDKHVEFPL-ELDLKPYTSGGQNSDVELKYHLYAIVEHMGS 370
+ HLKRF K+ V FPL +LDL+ + S N V Y+LYA+ H G+
Sbjct: 502 KILVLHLKRFSESRIRTSKLSTFVNFPLRDLDLREFASENTNHAV---YNLYAVSNHSGT 558
Query: 371 SPTCGHYFSYIRSSPDT--WHRLNDSRVTRVEEEFVLSQDAYILFY 414
+ GHY +Y R SP T WH NDS VT + V + DAY+LFY
Sbjct: 559 T-MGGHYTAYCR-SPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFY 602
>gi|6323879|ref|NP_013950.1| Ubp8p [Saccharomyces cerevisiae S288c]
gi|1717872|sp|P50102.1|UBP8_YEAST RecName: Full=Ubiquitin carboxyl-terminal hydrolase 8; AltName:
Full=Deubiquitinating enzyme 8; AltName: Full=Ubiquitin
thioesterase 8; AltName:
Full=Ubiquitin-specific-processing protease 8
gi|295789530|pdb|3M99|A Chain A, Structure Of The Ubp8-Sgf11-Sgf73-Sus1 Saga Dub Module
gi|887604|emb|CAA90194.1| unknown [Saccharomyces cerevisiae]
gi|151945927|gb|EDN64159.1| ubiquitin-specific processing protease [Saccharomyces cerevisiae
YJM789]
gi|285814227|tpg|DAA10122.1| TPA: Ubp8p [Saccharomyces cerevisiae S288c]
gi|392297392|gb|EIW08492.1| Ubp8p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 471
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 115/335 (34%), Positives = 172/335 (51%), Gaps = 32/335 (9%)
Query: 108 AGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSL- 166
+GL N+G+TCF+++ILQC H ++ S H C + C CAL D I L
Sbjct: 137 SGLINMGSTCFMSSILQCLIHNPYFIRHSMSQIHSNNCKVRSPDKCFSCAL-DKIVHELY 195
Query: 167 -------ASSGKVLSPRK-----LVDNLNYISSFFQRYQQEDAHEFLQCLLDRL-ESCCL 213
ASS + R+ L+ I+ Y Q+DAHEF Q +++++ +S L
Sbjct: 196 GALNTKQASSSSTSTNRQTGFIYLLTCAWKINQNLAGYSQQDAHEFWQFIINQIHQSYVL 255
Query: 214 D---SKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDT-YEPLIDLSLEIEDVGS 269
D +K + + Q + IV VF G L S + C C + S T +P +DLSL+I+D
Sbjct: 256 DLPNAKEVSRANNKQCECIVHTVFEGSLESSIVCPGCQNNSKTTIDPFLDLSLDIKDKKK 315
Query: 270 LGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK--TDGSY 327
L L+SF K E+++D + C +C KQL + K+PSV LKRF+ +GS
Sbjct: 316 LYECLDSFHKKEQLKD--FNYHCGECNSTQDAIKQLGIHKLPSVLVLQLKRFEHLLNGSN 373
Query: 328 VVKIDKHVEFPLELDLKPYTSG------GQNSDV-ELKYHLYAIVEHMGSSPTCGHYFSY 380
K+D +EFP L++K Y S +N V ++ Y L IV H G+ GHY ++
Sbjct: 374 R-KLDDFIEFPTYLNMKNYCSTKEKDKHSENGKVPDIIYELIGIVSHKGTVNE-GHYIAF 431
Query: 381 IRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYA 415
+ S W + NDS V+ + +E VL + AY+LFY
Sbjct: 432 CKISGGQWFKFNDSMVSSISQEEVLKEQAYLLFYT 466
>gi|27371223|gb|AAH41366.1| USP2 protein [Homo sapiens]
gi|119587890|gb|EAW67486.1| ubiquitin specific peptidase 2, isoform CRA_c [Homo sapiens]
Length = 362
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 118/341 (34%), Positives = 166/341 (48%), Gaps = 45/341 (13%)
Query: 108 AGLENLGNTCFINAILQCFTHTLPL----VQAL--RSFDHPRPCDGATEGFCVICALRDH 161
AGL NLGNTCF+N+ILQC ++T L +Q L R H G+ ++
Sbjct: 24 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHH-----GSNAHTALVEEFAKL 78
Query: 162 IELSLASS-GKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLES----CCLDSK 216
I+ SS V+SP + + + F Y Q+DA EFL+ LLD L + L K
Sbjct: 79 IQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPK 138
Query: 217 TKDESLS----------------SQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDL 260
+ E+L + D+ + +F G L S L C +CG CS ++P DL
Sbjct: 139 SNPENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDL 198
Query: 261 SLEIEDVG----SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAF 316
SL I G +L + FTK E + D + K TC +C+ + K+ + + P +
Sbjct: 199 SLPIAKRGYPEVTLMDCMRLFTK-EDVLDGDEKPTCCRCRGRKRCIKKFSIQRFPKILVL 257
Query: 317 HLKRFKTDGSYVVKIDKHVEFPL-ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCG 375
HLKRF K+ V FPL +LDL+ + S N V Y+LYA+ H G++ G
Sbjct: 258 HLKRFSESRIRTSKLTTFVNFPLRDLDLREFASENTNHAV---YNLYAVSNHSGTT-MGG 313
Query: 376 HYFSYIRSSPDT--WHRLNDSRVTRVEEEFVLSQDAYILFY 414
HY +Y R SP T WH NDS VT + V + DAY+LFY
Sbjct: 314 HYTAYCR-SPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLFY 353
>gi|294979873|pdb|3MHH|A Chain A, Structure Of The Saga Ubp8SGF11SUS1SGF73 DUB MODULE
gi|294979877|pdb|3MHS|A Chain A, Structure Of The Saga Ubp8SGF11SUS1SGF73 DUB MODULE BOUND
Ubiquitin Aldehyde
gi|400261283|pdb|4FJC|A Chain A, Structure Of The Saga Ubp8SGF11(1-72, Delta-Znf)SUS1SGF73
DUB Module
gi|400261287|pdb|4FJC|E Chain E, Structure Of The Saga Ubp8SGF11(1-72, Delta-Znf)SUS1SGF73
DUB Module
Length = 476
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 115/335 (34%), Positives = 172/335 (51%), Gaps = 32/335 (9%)
Query: 108 AGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSL- 166
+GL N+G+TCF+++ILQC H ++ S H C + C CAL D I L
Sbjct: 142 SGLINMGSTCFMSSILQCLIHNPYFIRHSMSQIHSNNCKVRSPDKCFSCAL-DKIVHELY 200
Query: 167 -------ASSGKVLSPRK-----LVDNLNYISSFFQRYQQEDAHEFLQCLLDRL-ESCCL 213
ASS + R+ L+ I+ Y Q+DAHEF Q +++++ +S L
Sbjct: 201 GALNTKQASSSSTSTNRQTGFIYLLTCAWKINQNLAGYSQQDAHEFWQFIINQIHQSYVL 260
Query: 214 D---SKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDT-YEPLIDLSLEIEDVGS 269
D +K + + Q + IV VF G L S + C C + S T +P +DLSL+I+D
Sbjct: 261 DLPNAKEVSRANNKQCECIVHTVFEGSLESSIVCPGCQNNSKTTIDPFLDLSLDIKDKKK 320
Query: 270 LGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK--TDGSY 327
L L+SF K E+++D + C +C KQL + K+PSV LKRF+ +GS
Sbjct: 321 LYECLDSFHKKEQLKD--FNYHCGECNSTQDAIKQLGIHKLPSVLVLQLKRFEHLLNGSN 378
Query: 328 VVKIDKHVEFPLELDLKPYTSG------GQNSDV-ELKYHLYAIVEHMGSSPTCGHYFSY 380
K+D +EFP L++K Y S +N V ++ Y L IV H G+ GHY ++
Sbjct: 379 R-KLDDFIEFPTYLNMKNYCSTKEKDKHSENGKVPDIIYELIGIVSHKGTVNE-GHYIAF 436
Query: 381 IRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYA 415
+ S W + NDS V+ + +E VL + AY+LFY
Sbjct: 437 CKISGGQWFKFNDSMVSSISQEEVLKEQAYLLFYT 471
>gi|426233172|ref|XP_004010591.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 2 [Ovis
aries]
Length = 476
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 124/367 (33%), Positives = 172/367 (46%), Gaps = 59/367 (16%)
Query: 107 GAGLENLGNTCFINAILQ---------CFTHTLPLVQ------ALRSFDHPRPCDGATEG 151
GL NLGNTCF+NAILQ C+ LP V+ A R H R
Sbjct: 114 ATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTR--SQGDSN 171
Query: 152 FCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRL--- 208
++ R + S SP L + I F+ YQQ+DAHEF++ LLD L
Sbjct: 172 VSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE 231
Query: 209 ---------------ESCCLDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDT 253
E+ L + K + +V +FGG L +++ C CG+ S
Sbjct: 232 LQGGFNGISRSSILQENSTLSASNK--CCINGASTVVTAIFGGILQNEVNCLICGTESRK 289
Query: 254 YEPLIDLSLEI-----------EDVG---SLGSALESFTKLEKIEDPETKFTCEKCKEQV 299
++P +DLSL+I ++ G SL L SFT LE++++ E + C KCK++
Sbjct: 290 FDPFLDLSLDIPSQFRNKRSKNQENGPTCSLRDCLRSFTDLEELDETEL-YMCHKCKKKQ 348
Query: 300 SVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE-LDLKPYTSGGQNSDVE-L 357
K+ + K+P V HLKRF K+D +VEFPL LD+K Y +NS E
Sbjct: 349 KSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPENC 408
Query: 358 KYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFY--- 414
Y L A+V H GS GHY +Y + W NDS VT +E+ V+ AYILFY
Sbjct: 409 LYDLAAVVVHHGSGVGSGHYTAYA-THEGRWFHFNDSTVTLTDEDTVVKAKAYILFYVER 467
Query: 415 -AKQGTE 420
AK G++
Sbjct: 468 QAKAGSD 474
>gi|405972649|gb|EKC37407.1| Ubiquitin carboxyl-terminal hydrolase 3 [Crassostrea gigas]
Length = 479
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 114/350 (32%), Positives = 171/350 (48%), Gaps = 44/350 (12%)
Query: 108 AGLENLGNTCFINAILQCFTHTLPL---VQALRSFD---------HPRPCDGATEGFCVI 155
+GL NLGNTCF+NA+LQ ++ ++ L S + R E ++
Sbjct: 120 SGLRNLGNTCFMNAVLQSLSNIQQFCGYIKQLPSLEEKVTKVKKIQTRKSKTPEEDVLLV 179
Query: 156 CALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLD- 214
LR + S +SP L + + F+ YQQ+DAHEF++ LLDRL + L
Sbjct: 180 EELRKTLCALWQGSKGAISPESLFAVIWKVVPRFRGYQQQDAHEFMRYLLDRLHTELLTL 239
Query: 215 ---SKTKDESLSSQGDN-IVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEI------ 264
+ + +G + IV +FGG L +++ C CG S ++P +DLSL+I
Sbjct: 240 LPYPNSDSPFIGPKGKSTIVTAIFGGLLQNEVTCLVCGVESKKHDPFLDLSLDIPQQFCT 299
Query: 265 ---------EDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAA 315
+ +L L+SFT+LE++E+ + C CK++ K+ + ++P+V
Sbjct: 300 RGVKAKDGEQLRCTLSDCLQSFTELEELEE-SELYMCSTCKKKQRSTKKFWIRRLPNVLC 358
Query: 316 FHLKRFKTDGSYVVKIDKHVEFPLE-LDLKPY-------TSGGQNSDVELKYHLYAIVEH 367
H+KRF+ + VK++ VEFPLE L++ Y T G + E Y L A+V H
Sbjct: 359 LHIKRFRWQSFFRVKLETFVEFPLEGLNMHKYILDNLHETRGSGSGSNE--YDLAAVVVH 416
Query: 368 MGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQ 417
GS GHY SY R W NDS VT E E V AYILFY ++
Sbjct: 417 HGSGAGSGHYTSYARHE-GQWFHFNDSTVTPCEPETVAKCKAYILFYIRR 465
>gi|195482373|ref|XP_002102021.1| GE17938 [Drosophila yakuba]
gi|194189545|gb|EDX03129.1| GE17938 [Drosophila yakuba]
Length = 1409
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/334 (31%), Positives = 164/334 (49%), Gaps = 36/334 (10%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL N+GNTCF+N+++QC +HT L + LRS +T+ ++ I+ S
Sbjct: 1085 GLRNIGNTCFMNSVIQCLSHTQELTRFLRSHH--GSRSSSTKDQQILHEFAKLIQEMWTS 1142
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESL------ 222
+ ++P +L + + Y Q+DA EFL+ LD L S L+S K E+L
Sbjct: 1143 NVHTVTPMELKRAFSTKHRMYSDYNQQDAQEFLRFFLDSLHS-ALNSGVKGETLNIDDNL 1201
Query: 223 -------------SSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVG- 268
+ +++V+ +F G L S L+C CG+ S T++P DLS+ +
Sbjct: 1202 SDNKKADLTWEWYTRHENSLVRDLFVGQLKSTLKCTTCGNTSVTFDPFWDLSVPLPSSSR 1261
Query: 269 -SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSY 327
L + L+ F + E++ D + TC KCK + K + + P HLKRF +
Sbjct: 1262 CKLEACLDLFIR-EEVLDGDEMPTCAKCKTRRKCTKSFTIQRFPKYLVIHLKRFSE--TR 1318
Query: 328 VVKIDKHVEFPL---ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSS 384
K+ VEFP EL++ Y G NS+ + Y LYAI HMGS+ GHY + +
Sbjct: 1319 WSKLSNIVEFPTSDSELNMGSY---GANSNSNVHYSLYAISNHMGST-AGGHYVALCKHP 1374
Query: 385 -PDTWHRLNDSRVTR-VEEEFVLSQDAYILFYAK 416
WH ND+ V+ + E ++S AYILFY +
Sbjct: 1375 VSRKWHEFNDNIVSEALSENHLVSSSAYILFYER 1408
>gi|302684821|ref|XP_003032091.1| hypothetical protein SCHCODRAFT_76495 [Schizophyllum commune H4-8]
gi|300105784|gb|EFI97188.1| hypothetical protein SCHCODRAFT_76495 [Schizophyllum commune H4-8]
Length = 621
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/346 (30%), Positives = 166/346 (47%), Gaps = 35/346 (10%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQ--ALRSFDHPRPCDGATEGFCVICALRDHIELSL 166
GL NLG TCF+N +LQ F H PL++ L R C T C C +
Sbjct: 166 GLLNLGQTCFMNVVLQSFVHN-PLLRNYFLGDMHDRRIC---TIADCTSCEMDSLFSEIY 221
Query: 167 ASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQG 226
+ P + S+ Y Q+DAHEF L+++ + + D S S++
Sbjct: 222 SDESSPYGPIGFLVTTWRGSAELAGYAQQDAHEFFISTLNQIHA-----SSPDASPSNKC 276
Query: 227 DNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVG--SLGSALESFTKLEKIE 284
IV R F G L S+++C CG+ + T +P+ D+SLE+ VG +L L FT EK+
Sbjct: 277 PCIVHRTFAGQLQSEVRCGRCGNVTLTVDPMFDVSLELRGVGENTLFDCLRRFTHPEKLW 336
Query: 285 DPETKFTCEKC-KEQVSVEKQLMLDKVPSVAAFHLKRFK---TDGSYVVKIDKHVEFPLE 340
E ++CE+C K K++ + ++P V +F KRF+ D V KI+ V FP
Sbjct: 337 TKE--YSCERCGKNGQEASKRMSIRRLPPVLSFQFKRFEQNMADKGTVRKIEASVRFPAT 394
Query: 341 LDLKPYTS---------GGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRL 391
LD+ PYT+ G + Y L+A++ H G GHY ++ R + W+R
Sbjct: 395 LDMSPYTTRAMRQHAGEGLPDPPGTYVYDLFAVINHEGQMNN-GHYTNFARYGRE-WYRF 452
Query: 392 NDSRVTRVEEEFVLSQDAYILFYAKQGTEWVSSLLEAESIGMNADI 437
+D +VT VL+ AY+ FY K+ ++ + + M+AD+
Sbjct: 453 DDDKVTNTSLATVLASAAYMCFYVKRRLDYKDA-----GMAMDADV 493
>gi|426233170|ref|XP_004010590.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 1 [Ovis
aries]
Length = 520
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 124/367 (33%), Positives = 172/367 (46%), Gaps = 59/367 (16%)
Query: 107 GAGLENLGNTCFINAILQ---------CFTHTLPLVQ------ALRSFDHPRPCDGATEG 151
GL NLGNTCF+NAILQ C+ LP V+ A R H R
Sbjct: 158 ATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTR--SQGDSN 215
Query: 152 FCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRL--- 208
++ R + S SP L + I F+ YQQ+DAHEF++ LLD L
Sbjct: 216 VSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE 275
Query: 209 ---------------ESCCLDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDT 253
E+ L + K + +V +FGG L +++ C CG+ S
Sbjct: 276 LQGGFNGISRSSILQENSTLSASNK--CCINGASTVVTAIFGGILQNEVNCLICGTESRK 333
Query: 254 YEPLIDLSLEI-----------EDVG---SLGSALESFTKLEKIEDPETKFTCEKCKEQV 299
++P +DLSL+I ++ G SL L SFT LE++++ E + C KCK++
Sbjct: 334 FDPFLDLSLDIPSQFRNKRSKNQENGPTCSLRDCLRSFTDLEELDETEL-YMCHKCKKKQ 392
Query: 300 SVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE-LDLKPYTSGGQNSDVE-L 357
K+ + K+P V HLKRF K+D +VEFPL LD+K Y +NS E
Sbjct: 393 KSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPENC 452
Query: 358 KYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFY--- 414
Y L A+V H GS GHY +Y + W NDS VT +E+ V+ AYILFY
Sbjct: 453 LYDLAAVVVHHGSGVGSGHYTAYA-THEGRWFHFNDSTVTLTDEDTVVKAKAYILFYVER 511
Query: 415 -AKQGTE 420
AK G++
Sbjct: 512 QAKAGSD 518
>gi|344313155|ref|NP_001230688.1| ubiquitin carboxyl-terminal hydrolase 2 isoform c [Homo sapiens]
Length = 362
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 118/341 (34%), Positives = 166/341 (48%), Gaps = 45/341 (13%)
Query: 108 AGLENLGNTCFINAILQCFTHTLPL----VQAL--RSFDHPRPCDGATEGFCVICALRDH 161
AGL NLGNTCF+N+ILQC ++T L +Q L R H G+ ++
Sbjct: 24 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHH-----GSNAHTALVEEFAKL 78
Query: 162 IELSLASS-GKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLES----CCLDSK 216
I+ SS V+SP + + + F Y Q+DA EFL+ LLD L + L K
Sbjct: 79 IQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPK 138
Query: 217 TKDESLS----------------SQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDL 260
+ E+L + D+ + +F G L S L C +CG CS ++P DL
Sbjct: 139 SNPENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDL 198
Query: 261 SLEIEDVG----SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAF 316
SL I G +L + FTK E + D + K TC +C+ + K+ + + P +
Sbjct: 199 SLPIAKRGYPEVTLMDCMRLFTK-EDVLDGDEKPTCCRCRGRKRCIKKFSIQRFPKILVL 257
Query: 317 HLKRFKTDGSYVVKIDKHVEFPL-ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCG 375
HLKRF K+ V FPL +LDL+ + S N V Y+LYA+ H G++ G
Sbjct: 258 HLKRFSESRIRTSKLTTFVNFPLRDLDLREFASENTNHAV---YNLYAVSNHSGTT-MGG 313
Query: 376 HYFSYIRSSPDT--WHRLNDSRVTRVEEEFVLSQDAYILFY 414
HY +Y R SP T WH NDS VT + V + DAY+LFY
Sbjct: 314 HYTAYCR-SPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLFY 353
>gi|198433676|ref|XP_002129026.1| PREDICTED: similar to ubiquitin specific protease 41 [Ciona
intestinalis]
Length = 543
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 109/349 (31%), Positives = 169/349 (48%), Gaps = 39/349 (11%)
Query: 102 KPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICA--LR 159
K +G GL N+GNTCF+N+ILQC ++T LR + G + +R
Sbjct: 195 KESGGNVGLRNIGNTCFMNSILQCLSNT----TILREYCMDETYKGEINRNSPMKGDLMR 250
Query: 160 DHIELSL---ASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLES----CC 212
+E+ + +G SP + S F Y+Q+D EFL+ LL+ L
Sbjct: 251 AFVEVLVRLWKPNGISHSPNNFKSKIQKFSPRFMGYEQQDCQEFLRFLLEGLHEDINRVR 310
Query: 213 LDSKTKDESLS----------------SQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEP 256
+ SK LS ++ D+ + +F G L S L+C C S TY+P
Sbjct: 311 IKSKEPLRELSHLSPQEKARATWSWYTTKDDSFIFDLFVGQLESSLECQECRHTSLTYDP 370
Query: 257 LIDLSLEI------EDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKV 310
DLSL I +V ++ L++FT+ E + D + K CE+CK + ++ K+L + K
Sbjct: 371 FWDLSLPISKKMYSNEVTTITDCLDNFTREETL-DKDEKPICERCKVRRTMTKKLSIHKF 429
Query: 311 PSVAAFHLKRFKTDGSYVVKIDKHVEFPL-ELDLKPYTSGGQNSDVELKYHLYAIVEHMG 369
P V HLKRF Y K++ V+FP+ L+L+ + S + ++ Y LYA+ H G
Sbjct: 430 PKVLVLHLKRFNEGSRYRQKLNNLVKFPVTSLNLRNFASKTREGNLPPTYDLYAVSNHCG 489
Query: 370 SSPTCGHYFSY-IRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQ 417
S GHY +Y SS W NDS V + + V +++AY+LFY ++
Sbjct: 490 SC-YGGHYTAYCYNSSSHAWLEYNDSSVNPISDGDVCTKEAYVLFYVRK 537
>gi|255725706|ref|XP_002547782.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240135673|gb|EER35227.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 543
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 128/401 (31%), Positives = 194/401 (48%), Gaps = 71/401 (17%)
Query: 45 NHPLTLTDLDKDQNNDDDDDYEEIYRDTRPISSSYGRYNWGSSLLSRPVEKHWPIQIKPT 104
NHP DL++ + + D DY S+ G YN S+ R P ++
Sbjct: 181 NHP----DLERIRMSVIDSDY-----------STSGTYNEDSNENYRE-----PGKLATR 220
Query: 105 GVGAGLENLGNTCFINAILQCFTHTLPLVQA------LRSFDHPRPCD-GATEGF----- 152
G+ G NLG TCF+++ILQ H P+++ L F+ R + GF
Sbjct: 221 GL-KGFVNLGATCFMSSILQTLIHN-PIIKYHFFNNDLHYFNCERGHNQDINNGFIDENN 278
Query: 153 -CVICALRDHIELSLASS---GKVLSPRKLVDNLNYISSFFQR------YQQEDAHEFLQ 202
C+ C++ + + S G LS N++++ + + +Q++DAHEF Q
Sbjct: 279 ACITCSMDNIFKTFFTSDNLDGFALS--------NFLATSWHKKKSLAGFQEQDAHEFFQ 330
Query: 203 CLLDRLESCCLDS----KTKDESLSSQGDN-----IVQRVFGGCLISKLQCCNCGSCSDT 253
LL+ L +D T E S N I V+G L S ++C +C S+T
Sbjct: 331 FLLNELH---IDHVRLMDTLGEGASETHGNSPCSCISHSVYGFQLKSSIECDSCEYVSNT 387
Query: 254 YEPLIDLSLEIEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSV 313
E + DLSLE+ + G L L+ FTK E +E +TC KC + K L + VP+V
Sbjct: 388 MEHVNDLSLELNNSGGLSDCLDQFTKAEHLE----HYTCTKCSSVKTTTKTLKIQTVPTV 443
Query: 314 AAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPT 373
HLKRFK D + KI+ +E P+ L+L Y DV+ Y L+ +V H GS T
Sbjct: 444 LTLHLKRFKHDLN-STKIETKIEIPMFLNLSEYCVEKPQPDVKQIYELFGVVVHEGSIST 502
Query: 374 CGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFY 414
GHY YI++S W++ +DS V+ V ++ VL+ +AY+LFY
Sbjct: 503 -GHYTVYIKNSGH-WYKCDDSVVSLVNQDEVLNSNAYLLFY 541
>gi|6573163|gb|AAF17574.1| ubiquitin specific processing protease [Rattus norvegicus]
Length = 618
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 118/338 (34%), Positives = 160/338 (47%), Gaps = 39/338 (11%)
Query: 108 AGLENLGNTCFINAILQCFTHTLPL----VQALRSFDHPRPCDGATEGFCVICALRDHIE 163
AGL NLGNTCF+N+ILQC ++T L +Q L D T L I
Sbjct: 280 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLGHTSSAHTALMEEFAKLIQTIW 339
Query: 164 LSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLES----CCLDSKTKD 219
S S V+SP + + + F Y Q+DA EFL+ LLD L + K
Sbjct: 340 TS--SPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVAARPKPSP 397
Query: 220 ESLS----------------SQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE 263
ESL + D+ + +F G L S L C +CG CS ++P DLSL
Sbjct: 398 ESLDHLPDEEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLP 457
Query: 264 IEDVG----SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLK 319
I G +L + FTK E + D + K TC +C+ + K+ + + P + HLK
Sbjct: 458 IAKRGYPEVTLMDCMRLFTK-EDVLDGDEKPTCCRCRARKRCIKKFSVQRFPKILVLHLK 516
Query: 320 RFKTDGSYVVKIDKHVEFPL-ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYF 378
RF K+ V FPL +LDL+ + S N V Y+LYA+ H G++ GHY
Sbjct: 517 RFSESRIRTSKLTTFVNFPLRDLDLREFASENTNHAV---YNLYAVSNHSGTT-MGGHYT 572
Query: 379 SYIRSSPDT--WHRLNDSRVTRVEEEFVLSQDAYILFY 414
+Y R SP T WH NDS VT + V + DAY+LFY
Sbjct: 573 AYCR-SPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFY 609
>gi|301756532|ref|XP_002914115.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Ailuropoda
melanoleuca]
gi|281347816|gb|EFB23400.1| hypothetical protein PANDA_001954 [Ailuropoda melanoleuca]
Length = 606
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 117/338 (34%), Positives = 163/338 (48%), Gaps = 39/338 (11%)
Query: 108 AGLENLGNTCFINAILQCFTHTLPL----VQALRSFDHPRPCDGATEGFCVICALRDHIE 163
AGL NLGNTCF+N+ILQC ++T L +Q L D + T L I
Sbjct: 268 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHSSNVHTALMEEFAKLIQTIW 327
Query: 164 LSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLES----CCLDSKTKD 219
S S V+SP + + + F Y Q+DA EFL+ LLD L + + K+
Sbjct: 328 TS--SPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTVRPKSNP 385
Query: 220 ESLS----------------SQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE 263
E+L + D+ + +F G L S L C +CG CS ++P DLSL
Sbjct: 386 ENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLP 445
Query: 264 IEDVG----SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLK 319
I G +L + FTK E + D + K TC +C+ + K+ + + P + HLK
Sbjct: 446 IAKRGYPEVTLMDCMRLFTK-EDVLDGDEKPTCCRCRARKRCIKKFSIQRFPKILVLHLK 504
Query: 320 RFKTDGSYVVKIDKHVEFPL-ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYF 378
RF K+ V FPL +LDL+ + S N V Y+LYA+ H G++ GHY
Sbjct: 505 RFSESRIRTSKLTTFVNFPLRDLDLREFASENTNHAV---YNLYAVSNHSGTT-MGGHYT 560
Query: 379 SYIRSSPDT--WHRLNDSRVTRVEEEFVLSQDAYILFY 414
+Y R SP T WH NDS VT + V + DAY+LFY
Sbjct: 561 AYCR-SPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFY 597
>gi|28565285|ref|NP_741994.1| ubiquitin carboxyl-terminal hydrolase 2 isoform b [Homo sapiens]
gi|410045962|ref|XP_003952100.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Pan
troglodytes]
gi|24943173|gb|AAN65363.1|AF440755_1 ubiquitin specific protease 2b [Homo sapiens]
gi|119587888|gb|EAW67484.1| ubiquitin specific peptidase 2, isoform CRA_a [Homo sapiens]
gi|158257942|dbj|BAF84944.1| unnamed protein product [Homo sapiens]
gi|167887742|gb|ACA06096.1| ubiquitin carboxyl-terminal hydrolase 2 variant 2 [Homo sapiens]
Length = 396
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 118/338 (34%), Positives = 163/338 (48%), Gaps = 39/338 (11%)
Query: 108 AGLENLGNTCFINAILQCFTHTLPL----VQALRSFDHPRPCDGATEGFCVICALRDHIE 163
AGL NLGNTCF+N+ILQC ++T L +Q L D + T L I
Sbjct: 58 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALVEEFAKLIQTIW 117
Query: 164 LSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLES----CCLDSKTKD 219
S S V+SP + + + F Y Q+DA EFL+ LLD L + L K+
Sbjct: 118 TS--SPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNP 175
Query: 220 ESLS----------------SQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE 263
E+L + D+ + +F G L S L C +CG CS ++P DLSL
Sbjct: 176 ENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLP 235
Query: 264 IEDVG----SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLK 319
I G +L + FTK E + D + K TC +C+ + K+ + + P + HLK
Sbjct: 236 IAKRGYPEVTLMDCMRLFTK-EDVLDGDEKPTCCRCRGRKRCIKKFSIQRFPKILVLHLK 294
Query: 320 RFKTDGSYVVKIDKHVEFPL-ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYF 378
RF K+ V FPL +LDL+ + S N V Y+LYA+ H G++ GHY
Sbjct: 295 RFSESRIRTSKLTTFVNFPLRDLDLREFASENTNHAV---YNLYAVSNHSGTT-MGGHYT 350
Query: 379 SYIRSSPDT--WHRLNDSRVTRVEEEFVLSQDAYILFY 414
+Y R SP T WH NDS VT + V + DAY+LFY
Sbjct: 351 AYCR-SPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLFY 387
>gi|349580513|dbj|GAA25673.1| K7_Ubp8p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 471
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 115/335 (34%), Positives = 172/335 (51%), Gaps = 32/335 (9%)
Query: 108 AGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSL- 166
+GL N+G+TCF+++ILQC H ++ S H C + C CAL D I L
Sbjct: 137 SGLINMGSTCFMSSILQCLIHNPYFIRHSMSQIHSNNCKVRSPDKCFSCAL-DKIVHELY 195
Query: 167 -------ASSGKVLSPRK-----LVDNLNYISSFFQRYQQEDAHEFLQCLLDRL-ESCCL 213
ASS + R+ L+ I+ Y Q+DAHEF Q +++++ +S L
Sbjct: 196 GALNTKQASSSSTSTNRQTGFIYLLTCAWKINQNLAGYSQQDAHEFWQFIINQIHQSYVL 255
Query: 214 D---SKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDT-YEPLIDLSLEIEDVGS 269
D +K + + Q + IV VF G L S + C C + S T +P +DLSL+I+D
Sbjct: 256 DLPNAKEVSRANNKQCECIVHTVFEGSLESSIVCPGCQNNSKTTIDPFLDLSLDIKDKKK 315
Query: 270 LGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK--TDGSY 327
L L+SF K E+++D + C +C KQL + K+PSV LKRF+ +GS
Sbjct: 316 LYECLDSFHKKEQLKD--FNYHCGECNSTQDAIKQLGIHKLPSVLVLQLKRFEHLLNGSN 373
Query: 328 VVKIDKHVEFPLELDLKPYTSG------GQNSDV-ELKYHLYAIVEHMGSSPTCGHYFSY 380
K+D +EFP L++K Y S +N V ++ Y L IV H G+ GHY ++
Sbjct: 374 R-KLDDFIEFPTYLNMKNYCSTKEKDKHSENGKVPDIIYELIGIVSHKGTVNE-GHYIAF 431
Query: 381 IRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYA 415
+ S W + NDS V+ + +E VL + AY+LFY
Sbjct: 432 CKISGGQWFKFNDSIVSSISQEEVLKEQAYLLFYT 466
>gi|241628902|ref|XP_002410027.1| ubiquitin-specific protease, putative [Ixodes scapularis]
gi|215503290|gb|EEC12784.1| ubiquitin-specific protease, putative [Ixodes scapularis]
Length = 340
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 110/338 (32%), Positives = 158/338 (46%), Gaps = 40/338 (11%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEG-----FCVICALRDHIE 163
GL NLGNTCF+N+I+QC HT PL++ + + T F L I
Sbjct: 2 GLRNLGNTCFMNSIVQCLAHTRPLLEYCLKDCYTSEINNITSSNRGALFEAFATLMKSIW 61
Query: 164 LSLASSGK-VLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLE------------- 209
S S+G+ +SP+ + + F Y Q+D+ EFL LL L
Sbjct: 62 RS--SNGEYAISPQAFRSQIQKFAPRFMGYSQQDSQEFLHYLLQGLHEDINRITSRPRHV 119
Query: 210 SCCLDSKTKDESLSSQG--------DNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLS 261
+ +D D +++ D+ + F G L S L+C CG S T++P DLS
Sbjct: 120 TTEIDDNLSDSQKAAEAWKRYLRFDDSKIVDCFVGQLKSTLKCSVCGHKSVTFDPFWDLS 179
Query: 262 LEI---EDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHL 318
L I D ++ L FTK E++ D + K TC CK + K + + P + HL
Sbjct: 180 LPIPKSSDSVTIQQCLSLFTK-EEVLDGDEKPTCSNCKTRQRCTKSFTIHRCPKILVLHL 238
Query: 319 KRFKTDGSYVVKIDKHVEFPL-ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHY 377
KRF + K++ VEFPL LDL PY S + Y+LYA+ H GS+ + GHY
Sbjct: 239 KRFSPGERFRAKLNTRVEFPLTNLDLCPYMSNSH----YVMYNLYAVSNHSGSTYS-GHY 293
Query: 378 FSY-IRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFY 414
+ + WH ND++VT V V S +AY+LFY
Sbjct: 294 TATCLHPKSGEWHECNDTKVTEVSSSRVASSEAYVLFY 331
>gi|167387647|ref|XP_001738248.1| ubiquitin carboxyl-terminal hydrolase DUB-1 [Entamoeba dispar
SAW760]
gi|165898621|gb|EDR25439.1| ubiquitin carboxyl-terminal hydrolase DUB-1, putative [Entamoeba
dispar SAW760]
Length = 585
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 112/350 (32%), Positives = 160/350 (45%), Gaps = 32/350 (9%)
Query: 105 GVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIEL 164
G G N + C++ +ILQ THT P + D L I+
Sbjct: 63 NAGRGYFNAHSNCYMISILQVLTHTTPFYNYM--IQQKIKVDD-----IFFKELERIIKE 115
Query: 165 SL-ASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRL-ESCCLDSKTKDESL 222
+ ++ + L P NL +SS QRYQQEDA EF L+D L E+ K K ++
Sbjct: 116 AFEKNNNQPLKPIIFEKNLKKLSSSLQRYQQEDATEFYLLLIDHLHEAIIGKGKNKISAI 175
Query: 223 SSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEK 282
SS +F LIS++ C NC +D E L +EI +L S + F K E
Sbjct: 176 SS--------IFHVELISRITCYNCTRFNDHDEHFSVLPIEITKQKTLESGFDQFFKKEM 227
Query: 283 IEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELD 342
I + + CEKC + + K ++P V LKRF D KI+ V FPL+L+
Sbjct: 228 I----SHYHCEKCNTKSNASKCYFFKRLPWVLPIQLKRFTWDEK---KINGKVTFPLQLN 280
Query: 343 LKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEE 402
+ Y G Y LYAIV H+G + GHY SY ++ W R +D V V +
Sbjct: 281 ISKYGVDGL-------YDLYAIVVHLGKTKFSGHYISYCKTPSGGWFRFDDEEVKPVSIK 333
Query: 403 FVLSQDAYILFYAKQGTEWVSSLLEAESIGMNADISNSSPKSVLDNVEND 452
VL ++AY+LFY+K E VS+ E + + D+ S V +N + D
Sbjct: 334 VVLQEEAYMLFYSK-SEERVSTTKEIKRAIESNDLEKLSTIVVKENEQKD 382
>gi|81883550|sp|Q5U349.1|UBP2_RAT RecName: Full=Ubiquitin carboxyl-terminal hydrolase 2; AltName:
Full=41 kDa ubiquitin-specific protease; AltName:
Full=Deubiquitinating enzyme 2; AltName: Full=Ubiquitin
thioesterase 2; AltName:
Full=Ubiquitin-specific-processing protease 2; AltName:
Full=Ubiquitin-specific-processing protease testis;
Short=UBP-t
gi|55250569|gb|AAH85719.1| Ubiquitin specific peptidase 2 [Rattus norvegicus]
gi|149041433|gb|EDL95274.1| ubiquitin specific peptidase 2, isoform CRA_a [Rattus norvegicus]
gi|149041435|gb|EDL95276.1| ubiquitin specific peptidase 2, isoform CRA_a [Rattus norvegicus]
Length = 618
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 118/338 (34%), Positives = 160/338 (47%), Gaps = 39/338 (11%)
Query: 108 AGLENLGNTCFINAILQCFTHTLPL----VQALRSFDHPRPCDGATEGFCVICALRDHIE 163
AGL NLGNTCF+N+ILQC ++T L +Q L D T L I
Sbjct: 280 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLGHTSSAHTALMEEFAKLIQTIW 339
Query: 164 LSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLES----CCLDSKTKD 219
S S V+SP + + + F Y Q+DA EFL+ LLD L + K
Sbjct: 340 TS--SPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVAARPKPSP 397
Query: 220 ESLS----------------SQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE 263
ESL + D+ + +F G L S L C +CG CS ++P DLSL
Sbjct: 398 ESLDHLPDEEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLP 457
Query: 264 IEDVG----SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLK 319
I G +L + FTK E + D + K TC +C+ + K+ + + P + HLK
Sbjct: 458 IAKRGYPEVTLMDCMRLFTK-EDVLDGDEKPTCCRCRARKRCIKKFSVQRFPKILVLHLK 516
Query: 320 RFKTDGSYVVKIDKHVEFPL-ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYF 378
RF K+ V FPL +LDL+ + S N V Y+LYA+ H G++ GHY
Sbjct: 517 RFSESRIRTSKLTTFVNFPLRDLDLREFASENTNHAV---YNLYAVSNHSGTT-MGGHYT 572
Query: 379 SYIRSSPDT--WHRLNDSRVTRVEEEFVLSQDAYILFY 414
+Y R SP T WH NDS VT + V + DAY+LFY
Sbjct: 573 AYCR-SPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFY 609
>gi|324513934|gb|ADY45703.1| Ubiquitin carboxyl-terminal hydrolase 22, partial [Ascaris suum]
Length = 494
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 155/342 (45%), Gaps = 34/342 (9%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N+I+Q HT L + H C++C L + +
Sbjct: 157 GLVNLGNTCFMNSIIQAMVHTPHLKDYFMTDQHRCLTPSHPNSQCLMCELSNTFQEFYKG 216
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDN 228
P + ++ + + Y+Q+DAHEF LD L S + + Q N
Sbjct: 217 DITPYKPHRFLNLVWTHARHLAGYEQQDAHEFFIAALDVLHR---HSGSSSLPTTPQECN 273
Query: 229 -IVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVG-----------SLGSALES 276
I+ +F G L S L C NCG S T +P D+SL++ SL L+
Sbjct: 274 CIIDWIFTGKLQSDLTCLNCGGVSTTVDPYWDISLDVGQEALLSPSADGPHISLEDCLQR 333
Query: 277 FTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVE 336
+ + E++ K C +C KQL L +P VA FHLKRF+ + + K+D V
Sbjct: 334 YIRPEQL-GSAAKIKCARCNTYEESTKQLTLKTLPMVACFHLKRFEHNSKHRKKMDTKVY 392
Query: 337 FPLELDLKPYTSGGQNSDV-----------------ELKYHLYAIVEHMGSSPTCGHYFS 379
FP +D+ P+T+ + + KY L+A+V H G+ + GHY
Sbjct: 393 FPQFIDMTPFTAAYRERSIGHEQKWNSVVADALTKNRNKYELFAVVNHDGTMES-GHYTC 451
Query: 380 YIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
+IR + W + +D ++R E VL+ + Y+LFY K ++
Sbjct: 452 FIRHQHNQWFQCDDQIISRAPVETVLASEGYLLFYHKSHLDY 493
>gi|114794332|pdb|2HD5|A Chain A, Usp2 In Complex With Ubiquitin
Length = 359
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 118/338 (34%), Positives = 163/338 (48%), Gaps = 39/338 (11%)
Query: 108 AGLENLGNTCFINAILQCFTHTLPL----VQALRSFDHPRPCDGATEGFCVICALRDHIE 163
AGL NLGNTCF+N+ILQC ++T L +Q L D + T L I
Sbjct: 10 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALVEEFAKLIQTIW 69
Query: 164 LSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLES----CCLDSKTKD 219
S S V+SP + + + F Y Q+DA EFL+ LLD L + L K+
Sbjct: 70 TS--SPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNP 127
Query: 220 ESLS----------------SQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE 263
E+L + D+ + +F G L S L C +CG CS ++P DLSL
Sbjct: 128 ENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLP 187
Query: 264 IEDVG----SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLK 319
I G +L + FTK E + D + K TC +C+ + K+ + + P + HLK
Sbjct: 188 IAKRGYPEVTLMDCMRLFTK-EDVLDGDEKPTCCRCRGRKRCIKKFSIQRFPKILVLHLK 246
Query: 320 RFKTDGSYVVKIDKHVEFPL-ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYF 378
RF K+ V FPL +LDL+ + S N V Y+LYA+ H G++ GHY
Sbjct: 247 RFSESRIRTSKLTTFVNFPLRDLDLREFASENTNHAV---YNLYAVSNHSGTT-MGGHYT 302
Query: 379 SYIRSSPDT--WHRLNDSRVTRVEEEFVLSQDAYILFY 414
+Y R SP T WH NDS VT + V + DAY+LFY
Sbjct: 303 AYCR-SPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLFY 339
>gi|430800750|pdb|3V6C|A Chain A, Crystal Structure Of Usp2 In Complex With Mutated
Ubiquitin
gi|430800752|pdb|3V6E|A Chain A, Crystal Structure Of Usp2 And A Mutant Form Of Ubiquitin
Length = 367
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 118/341 (34%), Positives = 166/341 (48%), Gaps = 45/341 (13%)
Query: 108 AGLENLGNTCFINAILQCFTHTLPL----VQAL--RSFDHPRPCDGATEGFCVICALRDH 161
AGL NLGNTCF+N+ILQC ++T L +Q L R H G+ ++
Sbjct: 29 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHH-----GSNAHTALVEEFAKL 83
Query: 162 IELSLASS-GKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLES----CCLDSK 216
I+ SS V+SP + + + F Y Q+DA EFL+ LLD L + L K
Sbjct: 84 IQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPK 143
Query: 217 TKDESLS----------------SQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDL 260
+ E+L + D+ + +F G L S L C +CG CS ++P DL
Sbjct: 144 SNPENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDL 203
Query: 261 SLEIEDVG----SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAF 316
SL I G +L + FTK E + D + K TC +C+ + K+ + + P +
Sbjct: 204 SLPIAKRGYPEVTLMDCMRLFTK-EDVLDGDEKPTCCRCRGRKRCIKKFSIQRFPKILVL 262
Query: 317 HLKRFKTDGSYVVKIDKHVEFPL-ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCG 375
HLKRF K+ V FPL +LDL+ + S N V Y+LYA+ H G++ G
Sbjct: 263 HLKRFSESRIRTSKLTTFVNFPLRDLDLREFASENTNHAV---YNLYAVSNHSGTT-MGG 318
Query: 376 HYFSYIRSSPDT--WHRLNDSRVTRVEEEFVLSQDAYILFY 414
HY +Y R SP T WH NDS VT + V + DAY+LFY
Sbjct: 319 HYTAYCR-SPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLFY 358
>gi|357113662|ref|XP_003558620.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like
[Brachypodium distachyon]
Length = 366
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 108/345 (31%), Positives = 166/345 (48%), Gaps = 48/345 (13%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSF--DHPRPCDGATEGFCVICALRDHIELSL 166
GLEN GNTC+ N++LQ +P + L + ++ DG + L I
Sbjct: 24 GLENFGNTCYCNSVLQALYFCVPFREQLLEYYANNKGAGDGEENMLTCLADLFSQISNQK 83
Query: 167 ASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLL----DRLESCCLDSKTKDESL 222
+G V++P++ + L + F+ Y +DAHEFL LL D LE C +K ++
Sbjct: 84 KKTG-VIAPKRFIQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILEKECNATKEPPQNS 142
Query: 223 SSQGDN------------------IVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEI 264
S Q ++ V + F G L ++ +C C + +D E +DLSL+I
Sbjct: 143 SLQKNSNGPINGQPNGSHRELDTTWVHKCFQGILTNQTRCLRCETVTDRDETFLDLSLDI 202
Query: 265 EDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTD 324
E S+ S L++F+ E + + E KF C+KC +K++ + K P++ HLKRFK
Sbjct: 203 EQNSSITSCLKNFSSTETL-NAEDKFFCDKCCSLQEAQKRMKIKKPPNILVIHLKRFKYI 261
Query: 325 ---GSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYI 381
G Y K+ V FPLEL L + NSD+E Y L+A++ H+GS P GHY S +
Sbjct: 262 EQLGRY-KKLSYRVVFPLELKL---INTVDNSDLE--YSLFAVLVHVGSGPNHGHYISLV 315
Query: 382 RSSPDTWHRLNDSRVTRVEEEFVL------------SQDAYILFY 414
+S + W +D V +E V + + YILFY
Sbjct: 316 KSH-NHWLFFDDENVEMTDESMVQTFFGSAQEFSGNTDNGYILFY 359
>gi|327308974|ref|XP_003239178.1| ubiquitin C-terminal hydrolase Ubp8 [Trichophyton rubrum CBS
118892]
gi|326459434|gb|EGD84887.1| ubiquitin C-terminal hydrolase Ubp8 [Trichophyton rubrum CBS
118892]
Length = 486
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 107/329 (32%), Positives = 154/329 (46%), Gaps = 30/329 (9%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRP-CDGATEGFCVICALRDHI-ELSL 166
GL NLG TC++N ILQ H L H C A C CAL D E S
Sbjct: 164 GLFNLGQTCYMNVILQTLFHEPVLTAYFLGNGHSTSECQKAN---CFGCALADAFAEFSN 220
Query: 167 ASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQG 226
+ L+ SS Y Q+DAHEF Q L+++L +S T
Sbjct: 221 EEKDESFGALNLLLASWQTSSDLAGYHQQDAHEFYQFLVNQLH----ESTTGHLDCDPAC 276
Query: 227 DNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE---------------DVG-SL 270
F G L S + C NCG S T +P++D+SL+++ DV +L
Sbjct: 277 RCFFHTAFFGKLRSTITCRNCGKVSRTEDPVMDVSLDLQVQKKKRALDGRDQSSDVAPTL 336
Query: 271 GSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVK 330
LE + EK+ E + C +C + V KQL L K+P + LKRF+ + S K
Sbjct: 337 QGCLEGYISPEKLAASE--YGCTQCNSNMGVTKQLRLRKLPVILCMQLKRFERNRSVSEK 394
Query: 331 IDKHVEFPLELDLKPYTSGGQNSD-VELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWH 389
++ V +P +++ PYT+ ++ + + +Y L ++V H+G + GHY +Y R + W
Sbjct: 395 VETKVTYPASINMMPYTTSPRSENRSQFQYDLLSVVVHIGDIDS-GHYLAYCRHGEE-WF 452
Query: 390 RLNDSRVTRVEEEFVLSQDAYILFYAKQG 418
+ ND RVT V E VL DAY+LFY Q
Sbjct: 453 KFNDDRVTVVAESEVLGADAYLLFYTLQA 481
>gi|302667460|ref|XP_003025313.1| ubiquitin C-terminal hydrolase Ubp8, putative [Trichophyton
verrucosum HKI 0517]
gi|291189418|gb|EFE44702.1| ubiquitin C-terminal hydrolase Ubp8, putative [Trichophyton
verrucosum HKI 0517]
Length = 489
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 106/329 (32%), Positives = 155/329 (47%), Gaps = 30/329 (9%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRP-CDGATEGFCVICALRDHI-ELSL 166
GL NLG TC++N ILQ H L H C A C CAL D E S
Sbjct: 167 GLFNLGQTCYMNVILQTLFHEPVLTAYFLGNGHSTSECQKAN---CFGCALADAFAEFSN 223
Query: 167 ASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQG 226
+ L+ S+ Y Q+DAHEF Q L+++L +S T +
Sbjct: 224 EEKDEGFGALNLLLASWQTSADLAGYHQQDAHEFYQFLVNQLH----ESTTGNLDCDPAC 279
Query: 227 DNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE---------------DVG-SL 270
F G L S + C NCG S T +P++D+SL+++ DV +L
Sbjct: 280 RCFFHTAFFGKLRSTITCRNCGKVSRTEDPVMDVSLDLQVQKKKRALDGGDQSSDVAPTL 339
Query: 271 GSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVK 330
LE + EK+ E + C +C + V KQL L K+P + LKRF+ + S K
Sbjct: 340 QGCLEGYISPEKLAASE--YGCTQCNSNMGVTKQLRLRKLPVILCMQLKRFERNRSVSEK 397
Query: 331 IDKHVEFPLELDLKPYTSGGQNSD-VELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWH 389
++ V +P +++ PYT+ ++ + + +Y L ++V H+G + GHY +Y R + W
Sbjct: 398 VETKVTYPASINMMPYTTSPRSENRSQFQYDLLSVVVHIGDIDS-GHYLAYCRHG-EQWF 455
Query: 390 RLNDSRVTRVEEEFVLSQDAYILFYAKQG 418
+ ND RVT V E VL DAY+LFY Q
Sbjct: 456 KFNDDRVTVVAESEVLGADAYLLFYTLQA 484
>gi|291414911|ref|XP_002723699.1| PREDICTED: ubiquitin thiolesterase 22 [Oryctolagus cuniculus]
Length = 529
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 106/340 (31%), Positives = 157/340 (46%), Gaps = 43/340 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q THT PL++ D R C+ + C++C + + +
Sbjct: 177 GLINLGNTCFMNCIVQALTHT-PLLRDFFLSDRHR-CEMQSPSSCLVCEMSSLFQEFYSG 234
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL-DSKTKDESLSSQGD 227
P KL+ + + Y+Q+DAHEFL LD L C D K + + +
Sbjct: 235 HRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHCN 294
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDV---------GSLGSA----- 273
I+ ++F G L S + C C S T +P D+SL++ GS GS
Sbjct: 295 CIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGCSTPFWPLSPGSEGSVVNGES 354
Query: 274 -----------LESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK 322
L FT+ E + K C C KQL + K+P VA FHLKRF+
Sbjct: 355 HVSGTTTLTDCLRRFTRPEHL-GSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFE 413
Query: 323 TDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-------------ELKYHLYAIVEHMG 369
KI +V FPLELD+ P+ + + S + + KY L+A+V H G
Sbjct: 414 HSAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG 473
Query: 370 SSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDA 409
+ + GHY S+IR D W + +D+ +T+ + VL +
Sbjct: 474 TLES-GHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEG 512
>gi|354474362|ref|XP_003499400.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Cricetulus
griseus]
Length = 502
Score = 146 bits (368), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 121/360 (33%), Positives = 165/360 (45%), Gaps = 55/360 (15%)
Query: 107 GAGLENLGNTCFINAILQ---------CFTHTLPLVQ------ALRSFDHPRPCDGATEG 151
GL NLGNTCF+NAILQ C+ LP V+ A R H R
Sbjct: 140 ATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTR--SQGDSN 197
Query: 152 FCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRL--- 208
++ R + S SP L + I F+ YQQ+DAHEF++ LLD L
Sbjct: 198 VSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE 257
Query: 209 ---------------ESCCLDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDT 253
E+ L + K + +V +FGG L +++ C CG+ S
Sbjct: 258 LQGGFNGVPRSSILQENSTLSANNK--CCINGASTVVTAIFGGILQNEVNCLICGTESRK 315
Query: 254 YEPLIDLSLEIED--------------VGSLGSALESFTKLEKIEDPETKFTCEKCKEQV 299
++P +DLSL+I V SL L SFT LE++++ E + C KCK++
Sbjct: 316 FDPFLDLSLDIPSQFRSKRSKNQESGPVCSLRDCLRSFTDLEELDETEL-YMCHKCKKKQ 374
Query: 300 SVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE-LDLKPYTSGGQNSDVE-L 357
K+ + K+P V HLKRF K+D +VEFPL LD+K Y +N E
Sbjct: 375 KSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENIGPESC 434
Query: 358 KYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQ 417
Y L A+V H GS GHY +Y + W NDS VT +EE V AYILFY ++
Sbjct: 435 LYDLAAVVVHHGSGVGSGHYTAYA-THEGRWFHFNDSTVTVTDEETVGKAKAYILFYVER 493
>gi|348583870|ref|XP_003477695.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Cavia
porcellus]
Length = 520
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 121/368 (32%), Positives = 164/368 (44%), Gaps = 71/368 (19%)
Query: 107 GAGLENLGNTCFINAILQ---------CFTHTLPLVQ------ALRSFDHPRPCDGATEG 151
GL NLGNTCF+NAILQ C+ LP V+ A R H R
Sbjct: 158 ATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTR--SQGDSS 215
Query: 152 FCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLE-- 209
++ R + S SP L + I F+ YQQ+DAHEF++ LLD L
Sbjct: 216 VSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE 275
Query: 210 ------------------------SCCLDSKTKDESLSSQGDNIVQRVFGGCLISKLQCC 245
CC++ + +V VFGG L +++ C
Sbjct: 276 LQGGFNGVSGTAILQENSSLAASNKCCINGAS----------TVVTAVFGGVLQNEVNCL 325
Query: 246 NCGSCSDTYEPLIDLSLEIED--------------VGSLGSALESFTKLEKIEDPETKFT 291
CG+ S ++P +DLSL+I V SL L SFT LE++++ E +
Sbjct: 326 ICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETEL-YM 384
Query: 292 CEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE-LDLKPYTSGG 350
C KCK++ K+ + K+P V HLKRF K+D +VEFPL LD+K Y
Sbjct: 385 CHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEP 444
Query: 351 QNSDVE-LKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDA 409
+NS E Y L A+V H GS GHY +Y W NDS VT +E+ V A
Sbjct: 445 ENSGPESCLYDLAAVVVHHGSGVGSGHYTAYA-VHEGRWFHFNDSTVTLTDEDTVGKAKA 503
Query: 410 YILFYAKQ 417
YILFY ++
Sbjct: 504 YILFYVER 511
>gi|345560761|gb|EGX43880.1| hypothetical protein AOL_s00210g327 [Arthrobotrys oligospora ATCC
24927]
Length = 1191
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 114/378 (30%), Positives = 174/378 (46%), Gaps = 67/378 (17%)
Query: 103 PTGVGA-GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCD-----GATEGFCVIC 156
PTG G GL+NLGNTC++N+I+QC + T+PL + S + + G+ F
Sbjct: 819 PTGFGTTGLKNLGNTCYMNSIIQCMSGTVPLARYFLSGFYKGHLNRENRLGSRGIFAEAF 878
Query: 157 AL--RDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLD-------- 206
A R+ E + A +SP + D ++S F+ Q+DA E+L+ LD
Sbjct: 879 ANLNRNLWEETYA----FVSPVTIKDISGRLNSQFRGKDQQDAQEYLEFFLDYLHEDLNA 934
Query: 207 -----RLESCCLDSKTKDESLSSQ-------------GDNIVQRVFGGCLISKLQCCNCG 248
RL D + + E L Q +++ + F G S+L+C CG
Sbjct: 935 NAGKPRLRELTDDEEKRREELPVQLASYYEWERYVHTNLSMIVKWFQGQFRSRLKCLKCG 994
Query: 249 SCSDTYEPLIDLSLEIEDVG-----SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEK 303
S TY P + LSL I +L ++ FTK E+I D + + C CK+ K
Sbjct: 995 HTSTTYSPFMYLSLPIPAKAGPNGCTLKDCMDEFTK-EEILDGDDAWHCPVCKKPRKASK 1053
Query: 304 QLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPY---------TSGG---- 350
QL + ++P V HLKRF G + K++ V F +DL Y GG
Sbjct: 1054 QLSISRMPVVLIIHLKRFSNHGMWRDKVNTLVNFGKSVDLTRYVPPPLDPKDVPGGMGLP 1113
Query: 351 QNSDV--ELKYHLYAIVEHMGSSPTCGHYFSY-------IRSSPDTWHRLNDSRVTRVEE 401
S+V Y LYA+ H GS T GHY ++ WHR +D++ T++E
Sbjct: 1114 MGSEVTPPFYYSLYAVTNHYGSL-TSGHYTAFVRVGGGTGGREGGVWHRFDDTKATKMET 1172
Query: 402 EFVLSQDAYILFYAKQGT 419
+ V++++AYILF+ + G
Sbjct: 1173 DDVVNRNAYILFWVRNGV 1190
>gi|302504513|ref|XP_003014215.1| ubiquitin C-terminal hydrolase Ubp8, putative [Arthroderma
benhamiae CBS 112371]
gi|291177783|gb|EFE33575.1| ubiquitin C-terminal hydrolase Ubp8, putative [Arthroderma
benhamiae CBS 112371]
Length = 489
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 107/329 (32%), Positives = 154/329 (46%), Gaps = 30/329 (9%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRP-CDGATEGFCVICALRDHI-ELSL 166
GL NLG TC++N ILQ H L H C A C CAL D E S
Sbjct: 167 GLFNLGQTCYMNVILQTLFHEPVLTAYFLGNGHSTSECQKAN---CFGCALADAFAEFSN 223
Query: 167 ASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQG 226
+ L+ SS Y Q+DAHEF Q L+++L +S T
Sbjct: 224 EEKDEGFGALNLLLASWQTSSDLAGYHQQDAHEFYQFLVNQLH----ESTTGHLDCDPAC 279
Query: 227 DNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE---------------DVG-SL 270
F G L S + C NCG S T +P++D+SL+++ DV +L
Sbjct: 280 RCFFHTAFFGKLRSTITCRNCGKVSRTEDPVMDVSLDLQVQKKKRALDGGDQSSDVAPTL 339
Query: 271 GSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVK 330
LE + EK+ E + C +C + V KQL L K+P + LKRF+ + S K
Sbjct: 340 QGCLEGYISPEKLAASE--YGCTQCNSNMGVTKQLRLRKLPVILCMQLKRFERNRSVSEK 397
Query: 331 IDKHVEFPLELDLKPYTSGGQNSD-VELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWH 389
++ V +P +++ PYT+ ++ + + +Y L ++V H+G + GHY +Y R + W
Sbjct: 398 VETKVTYPASINMMPYTTSPRSENRSQFQYDLLSVVVHIGDIDS-GHYLAYCRHG-EQWF 455
Query: 390 RLNDSRVTRVEEEFVLSQDAYILFYAKQG 418
+ ND RVT V E VL DAY+LFY Q
Sbjct: 456 KFNDDRVTVVAESEVLGADAYLLFYTLQA 484
>gi|344251056|gb|EGW07160.1| Ubiquitin carboxyl-terminal hydrolase 3 [Cricetulus griseus]
Length = 435
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 121/360 (33%), Positives = 165/360 (45%), Gaps = 55/360 (15%)
Query: 107 GAGLENLGNTCFINAILQ---------CFTHTLPLVQ------ALRSFDHPRPCDGATEG 151
GL NLGNTCF+NAILQ C+ LP V+ A R H R
Sbjct: 73 ATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTR--SQGDSN 130
Query: 152 FCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRL--- 208
++ R + S SP L + I F+ YQQ+DAHEF++ LLD L
Sbjct: 131 VSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE 190
Query: 209 ---------------ESCCLDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDT 253
E+ L + K + +V +FGG L +++ C CG+ S
Sbjct: 191 LQGGFNGVPRSSILQENSTLSANNK--CCINGASTVVTAIFGGILQNEVNCLICGTESRK 248
Query: 254 YEPLIDLSLEIED--------------VGSLGSALESFTKLEKIEDPETKFTCEKCKEQV 299
++P +DLSL+I V SL L SFT LE++++ E + C KCK++
Sbjct: 249 FDPFLDLSLDIPSQFRSKRSKNQESGPVCSLRDCLRSFTDLEELDETEL-YMCHKCKKKQ 307
Query: 300 SVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE-LDLKPYTSGGQNSDVE-L 357
K+ + K+P V HLKRF K+D +VEFPL LD+K Y +N E
Sbjct: 308 KSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENIGPESC 367
Query: 358 KYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQ 417
Y L A+V H GS GHY +Y + W NDS VT +EE V AYILFY ++
Sbjct: 368 LYDLAAVVVHHGSGVGSGHYTAYA-THEGRWFHFNDSTVTVTDEETVGKAKAYILFYVER 426
>gi|428183490|gb|EKX52348.1| hypothetical protein GUITHDRAFT_161377 [Guillardia theta CCMP2712]
Length = 351
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 105/333 (31%), Positives = 165/333 (49%), Gaps = 33/333 (9%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGAT----EGFCVICALRDHIEL 164
GLEN GNTC+ N++LQ LP +A+ D R C + E ++ + +
Sbjct: 24 GLENFGNTCYCNSVLQALYFCLPFREAV--LDWARACVNSKVRNDEDSMLVSVAETFLHI 81
Query: 165 SLASSGK---VLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRL-ESCCLDSKT--- 217
S S+ K V P+KL+ L + F+ YQ +DAHEF+ LL+++ E +++K
Sbjct: 82 S--SNKKKFGVYGPKKLIQVLRKNNEAFRGYQHQDAHEFMNYLLNQITEELHMEAKELAP 139
Query: 218 -KDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALES 276
+ VQ +F G L ++ +C NC + ++ E +DLSLEIE+ S+ S L +
Sbjct: 140 HSVDRTPEMPKTWVQNIFEGTLTNETRCLNCETVTNRDEAFLDLSLEIEENSSITSCLRN 199
Query: 277 FTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSY--VVKIDKH 334
F+ +E + + + KF CEKC K + + + P++ A HLKRFK S + K+
Sbjct: 200 FSGIETL-NKQDKFYCEKCCSLQEAHKSIRVKRTPNILALHLKRFKYVESVGRLKKLSHR 258
Query: 335 VEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDS 394
V FP+EL L T + D ++L+A+V H+GS GHY I+ + W +D
Sbjct: 259 VVFPVELKLNNTTDAAADEDA--FFNLFAVVVHVGSGMNHGHYVCLIKIH-EQWFHFDDD 315
Query: 395 RVTRVEEEFVLS-----------QDAYILFYAK 416
V V++ + S YILFY K
Sbjct: 316 TVEGVDDSHLHSVFGSAQEGGGNYSGYILFYQK 348
>gi|115451255|ref|NP_001049228.1| Os03g0190800 [Oryza sativa Japonica Group]
gi|24756890|gb|AAN64154.1| Putative ubiquitin-specific protease 3 [Oryza sativa Japonica
Group]
gi|108706601|gb|ABF94396.1| Ubiquitin carboxyl-terminal hydrolase 4, putative, expressed [Oryza
sativa Japonica Group]
gi|113547699|dbj|BAF11142.1| Os03g0190800 [Oryza sativa Japonica Group]
gi|125542717|gb|EAY88856.1| hypothetical protein OsI_10330 [Oryza sativa Indica Group]
gi|125585222|gb|EAZ25886.1| hypothetical protein OsJ_09723 [Oryza sativa Japonica Group]
gi|215697258|dbj|BAG91252.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 366
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 107/345 (31%), Positives = 163/345 (47%), Gaps = 48/345 (13%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICA--LRDHIELSL 166
GLEN GNTC+ N++LQ +P + L + G E + C L I
Sbjct: 24 GLENFGNTCYCNSVLQALYFCVPFREQLLEYYANNKSTGDVEDNMLTCLADLFSQISNQK 83
Query: 167 ASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRL------ESCCLDSKTKDE 220
+G V++P++ + L + F+ Y +DAHEFL LL+ L ES + ++
Sbjct: 84 KKTG-VIAPKRFIQRLKKQNEIFRSYMHQDAHEFLNFLLNELVDILEKESKVVAEPCENS 142
Query: 221 SLSSQGDN----------------IVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEI 264
SL + +V + F G L ++ +C C + +D E DLSL+I
Sbjct: 143 SLKKNSNGPINVQLNGTKKEPVPTLVHKCFQGILTNETRCLRCETVTDRDETFFDLSLDI 202
Query: 265 EDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTD 324
E S+ S L++F+ E + + E KF C+KC +K++ + K P++ HLKRFK
Sbjct: 203 EQNSSITSCLKNFSSTETL-NAEDKFFCDKCCSLQEAQKRMKIKKPPNILVIHLKRFKYI 261
Query: 325 ---GSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYI 381
G Y K+ V FPLEL L + NSD+E Y L+A++ H+GS P GHY S +
Sbjct: 262 EQLGRY-KKLSYRVVFPLELKL---INTVDNSDLE--YSLFAVLVHVGSGPNHGHYISLV 315
Query: 382 RSSPDTWHRLNDSRVTRVEEEFVL------------SQDAYILFY 414
+S + W +D V +E V + + YILFY
Sbjct: 316 KSH-NHWLFFDDENVEMTDESMVQTFFGSAQEFSGNTDNGYILFY 359
>gi|148693613|gb|EDL25560.1| ubiquitin specific peptidase 2, isoform CRA_a [Mus musculus]
Length = 411
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 118/338 (34%), Positives = 160/338 (47%), Gaps = 39/338 (11%)
Query: 108 AGLENLGNTCFINAILQCFTHTLPL----VQALRSFDHPRPCDGATEGFCVICALRDHIE 163
AGL NLGNTCF+N+ILQC ++T L +Q L D T L I
Sbjct: 73 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLGHTSSAHTALMEEFAKLIQTIW 132
Query: 164 LSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLES----CCLDSKTKD 219
S S V+SP + + + F Y Q+DA EFL+ LLD L + K
Sbjct: 133 TS--SPNDVVSPSEFKTQIQRYAPRFMGYNQQDAQEFLRFLLDGLHNEVNRVAARPKASP 190
Query: 220 ESLS----------------SQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE 263
E+L + D+ + +F G L S L C +CG CS ++P DLSL
Sbjct: 191 ETLDHLPDEEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLP 250
Query: 264 IEDVG----SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLK 319
I G +L + FTK E I D + K TC +C+ + K+ + + P + HLK
Sbjct: 251 IAKRGYPEVTLMDCMRLFTK-EDILDGDEKPTCCRCRARKRCIKKFSVQRFPKILVLHLK 309
Query: 320 RFKTDGSYVVKIDKHVEFPL-ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYF 378
RF K+ V FPL +LDL+ + S N V Y+LYA+ H G++ GHY
Sbjct: 310 RFSESRIRTSKLTTFVNFPLRDLDLREFASENTNHAV---YNLYAVSNHSGTT-MGGHYT 365
Query: 379 SYIRSSPDT--WHRLNDSRVTRVEEEFVLSQDAYILFY 414
+Y R SP T WH NDS VT + V + DAY+LFY
Sbjct: 366 AYCR-SPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFY 402
>gi|53987037|gb|AAV27298.1| poly-histidine-tagged Usp2-cc [Ubiquitin protease vector pHUsp2-cc]
Length = 378
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 118/338 (34%), Positives = 160/338 (47%), Gaps = 39/338 (11%)
Query: 108 AGLENLGNTCFINAILQCFTHTLPL----VQALRSFDHPRPCDGATEGFCVICALRDHIE 163
AGL NLGNTCF+N+ILQC ++T L +Q L D T L I
Sbjct: 40 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLGHTSSAHTALMEEFAKLIQTIW 99
Query: 164 LSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLES----CCLDSKTKD 219
S S V+SP + + + F Y Q+DA EFL+ LLD L + K
Sbjct: 100 TS--SPNDVVSPSEFKTQIQRYAPRFMGYNQQDAQEFLRFLLDGLHNEVNRVAARPKASP 157
Query: 220 ESLS----------------SQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE 263
E+L + D+ + +F G L S L C +CG CS ++P DLSL
Sbjct: 158 ETLDHLPDEEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLP 217
Query: 264 IEDVG----SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLK 319
I G +L + FTK E I D + K TC +C+ + K+ + + P + HLK
Sbjct: 218 IAKRGYPEVTLMDCMRLFTK-EDILDGDEKPTCCRCRARKRCIKKFSVQRFPKILVLHLK 276
Query: 320 RFKTDGSYVVKIDKHVEFPL-ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYF 378
RF K+ V FPL +LDL+ + S N V Y+LYA+ H G++ GHY
Sbjct: 277 RFSESRIRTSKLTTFVNFPLRDLDLREFASENTNHAV---YNLYAVSNHSGTT-MGGHYT 332
Query: 379 SYIRSSPDT--WHRLNDSRVTRVEEEFVLSQDAYILFY 414
+Y R SP T WH NDS VT + V + DAY+LFY
Sbjct: 333 AYCR-SPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFY 369
>gi|157127579|ref|XP_001661099.1| ubiquitin specific protease 2, putative [Aedes aegypti]
gi|108872885|gb|EAT37110.1| AAEL010854-PA [Aedes aegypti]
Length = 934
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 101/338 (29%), Positives = 163/338 (48%), Gaps = 39/338 (11%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL N+GNTCF+N+I+QC +HT L LR G ++ ++ I+ +
Sbjct: 605 GLWNIGNTCFMNSIIQCLSHTRELTNFLR--QQSTTERGTSKDHKILAEYTKLIKDMWSG 662
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESL------ 222
+ + ++P +L + + Q+DA EFL+ +D L C L+ K E +
Sbjct: 663 TTRSVNPSELKYAFSSKHRMYSGSAQQDAQEFLRFFIDSLH-CALNESVKREPINRAIED 721
Query: 223 ----------------SSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIED 266
S +++++ +F G L S L+C C S T++P DLSL +
Sbjct: 722 DDMDNRVKATMMWDWYSRVENSMIKNLFVGLLRSTLKCTYCNGASVTFDPFWDLSLPLPS 781
Query: 267 VGS---LGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKT 323
S L + ++ F K E++ D + TC +CK + K L +++ P HLKRF +
Sbjct: 782 TNSRCKLENCMDMFVK-EEVMDGIDQPTCSRCKARRKCTKSLTIERFPKYLVIHLKRF-S 839
Query: 324 DGSYVVKIDKHVEFPL---ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSY 380
+ + K+ VEFP EL+L+PY S + V Y LY I HMGS+ GHY +
Sbjct: 840 ETRWSNKLTNVVEFPTGERELNLQPYASEDHSGPVN--YSLYGISNHMGST-AGGHYVAV 896
Query: 381 IRSSPDT--WHRLNDSRVTRVEEEFVLSQDAYILFYAK 416
+ P T W+ ND+ V+ E +++ AY+LFY +
Sbjct: 897 CK-HPVTKEWNEFNDNFVSETSERSLVTSSAYVLFYER 933
>gi|37674279|ref|NP_932759.1| ubiquitin carboxyl-terminal hydrolase 2 isoform Usp2-45 [Mus
musculus]
gi|34874871|gb|AAQ83301.1| deubiquitinating enzyme Usp2-45 [Mus musculus]
gi|148693614|gb|EDL25561.1| ubiquitin specific peptidase 2, isoform CRA_b [Mus musculus]
Length = 396
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 118/338 (34%), Positives = 160/338 (47%), Gaps = 39/338 (11%)
Query: 108 AGLENLGNTCFINAILQCFTHTLPL----VQALRSFDHPRPCDGATEGFCVICALRDHIE 163
AGL NLGNTCF+N+ILQC ++T L +Q L D T L I
Sbjct: 58 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLGHTSSAHTALMEEFAKLIQTIW 117
Query: 164 LSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLES----CCLDSKTKD 219
S S V+SP + + + F Y Q+DA EFL+ LLD L + K
Sbjct: 118 TS--SPNDVVSPSEFKTQIQRYAPRFMGYNQQDAQEFLRFLLDGLHNEVNRVAARPKASP 175
Query: 220 ESLS----------------SQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE 263
E+L + D+ + +F G L S L C +CG CS ++P DLSL
Sbjct: 176 ETLDHLPDEEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLP 235
Query: 264 IEDVG----SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLK 319
I G +L + FTK E I D + K TC +C+ + K+ + + P + HLK
Sbjct: 236 IAKRGYPEVTLMDCMRLFTK-EDILDGDEKPTCCRCRARKRCIKKFSVQRFPKILVLHLK 294
Query: 320 RFKTDGSYVVKIDKHVEFPL-ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYF 378
RF K+ V FPL +LDL+ + S N V Y+LYA+ H G++ GHY
Sbjct: 295 RFSESRIRTSKLTTFVNFPLRDLDLREFASENTNHAV---YNLYAVSNHSGTT-MGGHYT 350
Query: 379 SYIRSSPDT--WHRLNDSRVTRVEEEFVLSQDAYILFY 414
+Y R SP T WH NDS VT + V + DAY+LFY
Sbjct: 351 AYCR-SPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFY 387
>gi|51592088|ref|NP_446226.2| ubiquitin carboxyl-terminal hydrolase 2 [Rattus norvegicus]
gi|6492126|gb|AAF14190.1|AF106659_1 deubiquitinating enzyme Ubp69 [Rattus norvegicus]
Length = 618
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 117/338 (34%), Positives = 159/338 (47%), Gaps = 39/338 (11%)
Query: 108 AGLENLGNTCFINAILQCFTHTLPL----VQALRSFDHPRPCDGATEGFCVICALRDHIE 163
AGL NLGNTCF+N+ILQC ++T L +Q L D T L I
Sbjct: 280 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLGHTSSAHTALMEEFAKLIQTIW 339
Query: 164 LSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLES----CCLDSKTKD 219
S S V+SP + + + F Y Q+DA EFL+ LLD L + K
Sbjct: 340 TS--SPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVAARPKPSP 397
Query: 220 ESLS----------------SQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE 263
ESL + D+ + +F G L S L C +CG CS ++P DLSL
Sbjct: 398 ESLDHLPDEEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLP 457
Query: 264 IEDVG----SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLK 319
I G +L + FTK E + D + K TC +C+ + K+ + + P + HLK
Sbjct: 458 IAKRGYPEVTLMDCMRLFTK-EDVLDGDEKPTCCRCRARKRCIKKFSVQRFPKILVLHLK 516
Query: 320 RFKTDGSYVVKIDKHVEFPL-ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYF 378
RF K+ V FPL +LDL+ + S N V Y+LYA+ H G++ GHY
Sbjct: 517 RFSESRIRTSKLTTFVNFPLRDLDLREFASENTNHAV---YNLYAVSNHSGTT-MGGHYT 572
Query: 379 SYIRSSPDT--WHRLNDSRVTRVEEEFVLSQDAYILFY 414
+Y R SP T WH NDS VT + V + DAY+ FY
Sbjct: 573 AYCR-SPVTGEWHTFNDSSVTPMSSSQVRTSDAYLFFY 609
>gi|195624860|gb|ACG34260.1| ubiquitin carboxyl-terminal hydrolase 4 [Zea mays]
Length = 368
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 107/348 (30%), Positives = 162/348 (46%), Gaps = 46/348 (13%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GLEN GNTC+ N++LQ +P + L + G E + C +++S A
Sbjct: 26 GLENFGNTCYCNSVLQALYFCIPFREQLLEYYANNKTPGDAEENLLTCLADLFMQISQAK 85
Query: 169 SGK-VLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL--DSKTKDESLSSQ 225
V++P++ V + + F+ Y +DAHEFL LL+ L S KD SS
Sbjct: 86 KKTGVIAPKRFVQRVKKQNELFRSYMHQDAHEFLNFLLNELVDILEKESSAAKDSPQSSS 145
Query: 226 GD--------------------NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE 265
+ +V + F G L ++ +C C + + E +DLS++IE
Sbjct: 146 PEKAPNGPVQPLANGVKKEPPVTLVHKSFQGILTNETRCLRCETVTARDETFLDLSVDIE 205
Query: 266 DVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTD- 324
S+ S L++F E + + E KF C+KC +K++ + K P + HLKRFK
Sbjct: 206 QNSSITSCLKNFCSTETL-NAEDKFFCDKCCSLQEAQKRMKIKKTPHILVIHLKRFKYIE 264
Query: 325 --GSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIR 382
G Y K+ V FP+EL L + DV+ +Y L+A+V H+GS P GHY S ++
Sbjct: 265 QLGRYK-KLSYRVVFPMELKL-----SNSSDDVDTEYSLFAVVVHVGSGPNHGHYVSLVK 318
Query: 383 SSPDTWHRLNDSRVTRVEEE-----FVLSQD-------AYILFYAKQG 418
S + W +D V VEE+ F S + YILFY G
Sbjct: 319 SH-NHWLFFDDENVEMVEEQTLQTFFGTSHEYSGNTDHGYILFYEGLG 365
>gi|118138325|pdb|2IBI|A Chain A, Covalent Ubiquitin-Usp2 Complex
Length = 374
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 117/341 (34%), Positives = 165/341 (48%), Gaps = 45/341 (13%)
Query: 108 AGLENLGNTCFINAILQCFTHTLPL----VQAL--RSFDHPRPCDGATEGFCVICALRDH 161
AGL NLGNTCF+N+ILQC ++T L +Q L R H G+ ++
Sbjct: 36 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHH-----GSNAHTALVEEFAKL 90
Query: 162 IELSLASS-GKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLES----CCLDSK 216
I+ SS V+SP + + + F Y Q+DA EFL+ LLD L + L K
Sbjct: 91 IQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPK 150
Query: 217 TKDESLS----------------SQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDL 260
+ E+L + D+ + +F G L S L C +CG CS ++P DL
Sbjct: 151 SNPENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDL 210
Query: 261 SLEIEDVG----SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAF 316
SL I G +L + FTK E + D + TC +C+ + K+ + + P +
Sbjct: 211 SLPIAKRGYPEVTLMDCMRLFTK-EDVLDGDAAPTCCRCRGRKRCIKKFSIQRFPKILVL 269
Query: 317 HLKRFKTDGSYVVKIDKHVEFPL-ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCG 375
HLKRF K+ V FPL +LDL+ + S N V Y+LYA+ H G++ G
Sbjct: 270 HLKRFSESRIRTSKLTTFVNFPLRDLDLREFASENTNHAV---YNLYAVSNHSGTT-MGG 325
Query: 376 HYFSYIRSSPDT--WHRLNDSRVTRVEEEFVLSQDAYILFY 414
HY +Y R SP T WH NDS VT + V + DAY+LFY
Sbjct: 326 HYTAYCR-SPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLFY 365
>gi|38344011|emb|CAE03179.2| OSJNBa0070O11.10 [Oryza sativa Japonica Group]
gi|215704828|dbj|BAG94856.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 370
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 100/360 (27%), Positives = 163/360 (45%), Gaps = 64/360 (17%)
Query: 119 INAILQCFTHTLPLVQALRSFDH------------PRPCDGATEGFCVICALRDHIELSL 166
+N++LQ H PL H R + + C+ C L + +
Sbjct: 1 MNSVLQALLHAPPLRNYFLGDRHNRYLCPRQTPMRRRSAEANDKAACLACDLDEIYSAAF 60
Query: 167 ASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQG 226
+ SP K + + +S Y+Q+DAHEF +LD + D + K +
Sbjct: 61 SGERTPYSPAKFLYSWWQHASNLASYEQQDAHEFFISILDHIHENIKDDQHKSLAQGHGD 120
Query: 227 DNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE--------------------- 265
I RVF G L S + C +CG S T+EP +D+SL+++
Sbjct: 121 CCIAHRVFSGILRSDVTCTHCGFTSTTFEPCMDISLDLDAGYNNSLGVANPKVHVRNGER 180
Query: 266 -------DVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHL 318
V +L LE FT+ E++ D E KF CE+CKE+ KQ+ + ++P V+ FH+
Sbjct: 181 SSGGTNTKVSTLMRCLERFTRAERL-DAEQKFFCERCKERQESLKQMSIRRLPLVSCFHI 239
Query: 319 KRFKTDGSYVV--KIDKHVEFPLELDLKPYTSGG-------------------QNSDVEL 357
KRF+ + K+D ++FP LD+ PY S S+
Sbjct: 240 KRFEHSSVKKMSRKVDHCLQFPFSLDMAPYLSSSILRSRFGNRIFPSEASDADSVSEFSS 299
Query: 358 KYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQ 417
++ ++A++ H G GHY +Y+R + + W++ +D+ VTRVEE V + AY+LFY ++
Sbjct: 300 EFEIFAVIMHSGKLEA-GHYVTYLRLN-NHWYKCDDAWVTRVEEHTVRTSQAYMLFYVQK 357
>gi|401626223|gb|EJS44179.1| ubp8p [Saccharomyces arboricola H-6]
Length = 473
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 112/337 (33%), Positives = 165/337 (48%), Gaps = 34/337 (10%)
Query: 108 AGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLA 167
+GL N+G+TCF+++ILQC H ++ + H C + C CAL D I L
Sbjct: 137 SGLINMGSTCFMSSILQCLIHNPYFIRHSMNQAHSNKCKVRSPDKCFSCAL-DKIVHELY 195
Query: 168 SSGKVLSPRKLVDNLNYISSF-------------FQRYQQEDAHEFLQCLLDRL-ESCCL 213
P N + F Y Q+DAHEF Q +++++ +S L
Sbjct: 196 GVLNTDKPFSSSSATNRQTGFIYLLTCAWKINQNLAGYSQQDAHEFWQFIINQIHQSYVL 255
Query: 214 DSKTKDESLSS---QGDNIVQRVFGGCLISKLQCCNCGSCSDT-YEPLIDLSLEIEDVGS 269
+ E+ S+ D IV VF G L S + C C + S T +P +DLSL+I+D
Sbjct: 256 SLENPKEAESANDKHCDCIVHTVFEGSLESSIVCPGCQNNSKTTIDPFMDLSLDIKDKKK 315
Query: 270 LGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK--TDGSY 327
L L+SF K E ++D + C KC KQL + K+PSV LKRF+ +G+
Sbjct: 316 LYECLDSFHKKELLKD--FNYHCGKCNSTQDAIKQLGIHKLPSVLVLQLKRFEHLLNGTN 373
Query: 328 VVKIDKHVEFPLELDLKPYTSGGQ--------NSDV-ELKYHLYAIVEHMGSSPTCGHYF 378
K+D +EFP L++K Y S G+ N V ++ Y L IV H G+ GHY
Sbjct: 374 R-KLDDFIEFPTYLNMKSYCSKGESESEKHIGNGKVPDIIYELIGIVSHRGTVNE-GHYI 431
Query: 379 SYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYA 415
++ + S W + NDS V+ + +E VL + AY+LFY
Sbjct: 432 AFCKISGGQWFKFNDSMVSSISQEGVLKEQAYLLFYT 468
>gi|226496747|ref|NP_001146737.1| uncharacterized protein LOC100280339 [Zea mays]
gi|219888545|gb|ACL54647.1| unknown [Zea mays]
gi|223974199|gb|ACN31287.1| unknown [Zea mays]
gi|413918515|gb|AFW58447.1| putative ubiquitin carboxyl-terminal hydrolase superfamily protein
[Zea mays]
Length = 368
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 107/348 (30%), Positives = 162/348 (46%), Gaps = 46/348 (13%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GLEN GNTC+ N++LQ +P + L + G E + C +++S A
Sbjct: 26 GLENFGNTCYCNSVLQALYFCIPFREQLLEYYANNKTPGDAEENLLTCLADLFMQISQAK 85
Query: 169 SGK-VLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL--DSKTKDESLSSQ 225
V++P++ V + + F+ Y +DAHEFL LL+ L S KD SS
Sbjct: 86 KKTGVIAPKRFVQRVKKQNELFRSYMHQDAHEFLNFLLNELVDILEKESSAAKDSPQSSS 145
Query: 226 GD--------------------NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE 265
+ +V + F G L ++ +C C + + E +DLS++IE
Sbjct: 146 PEKAPNGPVQPLANGVKKEPPVTLVHKSFQGILTNETRCLRCETVTARDETFLDLSVDIE 205
Query: 266 DVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTD- 324
S+ S L++F E + + E KF C+KC +K++ + K P + HLKRFK
Sbjct: 206 QNSSITSCLKNFCSTETL-NAEDKFFCDKCCSLQEAQKRMKIKKAPHILVIHLKRFKYIE 264
Query: 325 --GSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIR 382
G Y K+ V FP+EL L + DV+ +Y L+A+V H+GS P GHY S ++
Sbjct: 265 QLGRYK-KLSYRVVFPMELKL-----SNSSDDVDTEYSLFAVVVHVGSGPNHGHYVSLVK 318
Query: 383 SSPDTWHRLNDSRVTRVEEE-----FVLSQD-------AYILFYAKQG 418
S + W +D V VEE+ F S + YILFY G
Sbjct: 319 SH-NHWLFFDDENVEMVEEQTLQTFFGTSHEYSGNTDHGYILFYEGLG 365
>gi|326504080|dbj|BAK02826.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 370
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 107/349 (30%), Positives = 163/349 (46%), Gaps = 48/349 (13%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSF--DHPRPCDGATEGFCVICALRDHIELSL 166
GLEN GNTC+ N++LQ P + L + ++ P D + L + S
Sbjct: 26 GLENFGNTCYCNSVLQALYFCTPFREQLLEYYTNNKNPGDAEENLLTCLADLFMQVSQSK 85
Query: 167 ASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL--DSKTKDESLSS 224
+G V++P++ V + + F+ Y +DAHEFL LL+ L S KD SS
Sbjct: 86 KKTG-VIAPKRFVQRVKKQNELFRSYMHQDAHEFLNFLLNELVDILEKESSAAKDSPQSS 144
Query: 225 QGDNI--------------------VQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEI 264
+ + V + F G L ++ +C C + + E DLS++I
Sbjct: 145 SPEKVPNGPVQPLANGVKKEPPVTLVHKNFQGILTNETKCLRCETVTARDETFFDLSVDI 204
Query: 265 EDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTD 324
E S+ S L++F+ E + + E KF C+KC +K++ + K P + HLKRFK
Sbjct: 205 EQNSSITSCLKNFSSTETL-NAEDKFFCDKCCSLQEAQKRMKIKKAPHILVIHLKRFKYI 263
Query: 325 ---GSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYI 381
G Y K+ V FP+EL + G + DV+ +Y L+A+V H+GS P GHY S +
Sbjct: 264 EQLGRYK-KLSYRVVFPMELKM-----GSTSDDVDTEYSLFAVVVHVGSGPNHGHYVSLV 317
Query: 382 RSSPDTWHRLNDSRVTRVEE-----------EFVLSQD-AYILFYAKQG 418
+S + W +D V VEE E+ + D YILFY G
Sbjct: 318 KSH-NHWLFFDDENVEMVEESTLQTFFGSSHEYSGNTDHGYILFYEGLG 365
>gi|190408449|gb|EDV11714.1| ubiquitin carboxyl-terminal hydrolase 8 [Saccharomyces cerevisiae
RM11-1a]
gi|256271624|gb|EEU06666.1| Ubp8p [Saccharomyces cerevisiae JAY291]
gi|259148808|emb|CAY82053.1| Ubp8p [Saccharomyces cerevisiae EC1118]
gi|323303444|gb|EGA57239.1| Ubp8p [Saccharomyces cerevisiae FostersB]
gi|323332143|gb|EGA73554.1| Ubp8p [Saccharomyces cerevisiae AWRI796]
gi|323336055|gb|EGA77329.1| Ubp8p [Saccharomyces cerevisiae Vin13]
gi|323347039|gb|EGA81315.1| Ubp8p [Saccharomyces cerevisiae Lalvin QA23]
gi|323353165|gb|EGA85465.1| Ubp8p [Saccharomyces cerevisiae VL3]
Length = 471
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 114/335 (34%), Positives = 171/335 (51%), Gaps = 32/335 (9%)
Query: 108 AGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSL- 166
+GL N+G+TCF+++ILQC H ++ S H C + C CAL D I L
Sbjct: 137 SGLINMGSTCFMSSILQCLIHNPYFIRHSMSQIHSNNCKVRSPDKCFSCAL-DKIVHELY 195
Query: 167 -------ASSGKVLSPRK-----LVDNLNYISSFFQRYQQEDAHEFLQCLLDRL-ESCCL 213
ASS + R+ L+ I+ Y Q+DAHEF Q +++++ +S L
Sbjct: 196 GALNTKQASSSSTSTNRQTGFIYLLTCAWKINQNLAGYSQQDAHEFWQFIINQIHQSYVL 255
Query: 214 D---SKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDT-YEPLIDLSLEIEDVGS 269
D +K + + Q + IV VF G L S + C C + S T +P +DLSL+I+D
Sbjct: 256 DLPNAKEVSRANNKQCECIVHTVFEGSLESSIVCPGCQNNSKTTIDPFLDLSLDIKDKKK 315
Query: 270 LGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK--TDGSY 327
L L+SF K E+++D + C +C KQL + K+PSV LKRF+ +GS
Sbjct: 316 LYECLDSFHKKEQLKD--FNYHCGECNSTQDAIKQLGIHKLPSVLVLQLKRFEHLLNGSN 373
Query: 328 VVKIDKHVEFPLELDLKPYTSG------GQNSDV-ELKYHLYAIVEHMGSSPTCGHYFSY 380
K+D +EFP L++K Y S +N V ++ Y L IV H G+ GHY ++
Sbjct: 374 R-KLDDFIEFPTYLNMKNYCSTKEKDKHSENGKVPDIIYELIGIVSHKGTVNE-GHYIAF 431
Query: 381 IRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYA 415
+ S W + NDS V+ + + VL + AY+LFY
Sbjct: 432 CKISGGQWFKFNDSMVSSISQAEVLKEQAYLLFYT 466
>gi|3386552|gb|AAC28393.1| ubiquitin-specific protease UBP41 [Mus musculus]
Length = 353
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 118/338 (34%), Positives = 160/338 (47%), Gaps = 39/338 (11%)
Query: 108 AGLENLGNTCFINAILQCFTHTLPL----VQALRSFDHPRPCDGATEGFCVICALRDHIE 163
AGL NLGNTCF+N+ILQC ++T L +Q L D T L I
Sbjct: 15 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLGHTSSAHTALMEEFAKLIQTIW 74
Query: 164 LSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLES----CCLDSKTKD 219
S S V+SP + + + F Y Q+DA EFL+ LLD L + K
Sbjct: 75 TS--SPNDVVSPSEFKTQIQRYAPRFMGYNQQDAQEFLRFLLDGLHNEVNRVAARPKASP 132
Query: 220 ESLS----------------SQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE 263
E+L + D+ + +F G L S L C +CG CS ++P DLSL
Sbjct: 133 ETLDHLPDEEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLP 192
Query: 264 IEDVG----SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLK 319
I G +L + FTK E I D + K TC +C+ + K+ + + P + HLK
Sbjct: 193 IAKRGYPEVTLMDCMRLFTK-EDILDGDEKPTCCRCRARKRCIKKFSVQRFPKILVLHLK 251
Query: 320 RFKTDGSYVVKIDKHVEFPL-ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYF 378
RF K+ V FPL +LDL+ + S N V Y+LYA+ H G++ GHY
Sbjct: 252 RFSESRIRTSKLTTFVNFPLRDLDLREFASENTNHAV---YNLYAVSNHSGTT-MGGHYT 307
Query: 379 SYIRSSPDT--WHRLNDSRVTRVEEEFVLSQDAYILFY 414
+Y R SP T WH NDS VT + V + DAY+LFY
Sbjct: 308 AYCR-SPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFY 344
>gi|417403199|gb|JAA48417.1| Putative ubiquitin carboxyl-terminal hydrolase 2 [Desmodus
rotundus]
Length = 602
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 118/338 (34%), Positives = 160/338 (47%), Gaps = 39/338 (11%)
Query: 108 AGLENLGNTCFINAILQCFTHTLPL----VQALRSFDHPRPCDGATEGFCVICALRDHIE 163
AGL NLGNTCF+N+ILQC ++T L +Q L D + T L I
Sbjct: 264 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHSSNAHTALMEEFAKLIQTIW 323
Query: 164 LSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCC----------- 212
S S V+SP + + + F Y Q+DA EFL+ LLD L +
Sbjct: 324 TS--SLNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNAVNRVTVRPKSNP 381
Query: 213 --LDSKTKDESLSSQGDNIVQR-------VFGGCLISKLQCCNCGSCSDTYEPLIDLSLE 263
LD DE ++R +F G L S L C +CG CS ++P DLSL
Sbjct: 382 ENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLP 441
Query: 264 IEDVG----SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLK 319
I G +L + FTK E + D + K TC +C+ + K+ + + P + HLK
Sbjct: 442 IAKRGYPEVTLMDCMRLFTK-EDVLDGDEKPTCCRCRTRKRCIKKFSIQRFPKILVLHLK 500
Query: 320 RFKTDGSYVVKIDKHVEFPL-ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYF 378
RF K+ V FPL +LDL+ + S N V Y+LYA+ H G++ GHY
Sbjct: 501 RFSESRIRTSKLTTFVNFPLRDLDLREFASETTNHAV---YNLYAVSNHSGTT-VGGHYT 556
Query: 379 SYIRSSPDT--WHRLNDSRVTRVEEEFVLSQDAYILFY 414
+Y R SP T WH NDS VT + V + DAY+LFY
Sbjct: 557 AYCR-SPVTGEWHTFNDSSVTSMFSSQVRTSDAYLLFY 593
>gi|209876007|ref|XP_002139446.1| ubiquitin carboxyl-terminal hydrolase domain-containing protein
[Cryptosporidium muris RN66]
gi|209555052|gb|EEA05097.1| ubiquitin carboxyl-terminal hydrolase domain-containing protein
[Cryptosporidium muris RN66]
Length = 757
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 113/395 (28%), Positives = 190/395 (48%), Gaps = 46/395 (11%)
Query: 106 VGAGLENLG-NTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGF-CVICALRDHI- 162
VG GL N G NTC++N+ILQ T+ P++ + H + C E C++C DHI
Sbjct: 99 VGKGLLNSGWNTCYLNSILQALTYAPPILYDCLNMRHHKVCKYYRENLVCLLCMFEDHIL 158
Query: 163 --------ELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLD 214
++ S + ++P L I F+ +DAHEFL+ L+ L +
Sbjct: 159 TIFSGNEKNQNINKSQRAIAPNILRCAQKLIWRKFRIGIMQDAHEFLRYFLEGLHKASVP 218
Query: 215 SKTKDESLSSQGDNI------VQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVG 268
+ + + + + I + ++F G S++ C +C S+TY+P +D+ L+I V
Sbjct: 219 KNLQSDDIFRKLNPIDTSTTYIGQLFCGFFRSQIVCFSCLYMSNTYDPFMDIPLDIVGVS 278
Query: 269 SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYV 328
SL +A FTK E + ++ C KC+++ K+++++K+P + LKRF G
Sbjct: 279 SLENAFSIFTKKEYLRGA-NQYKCPKCEKKSDASKEVLIEKLPPLLTIQLKRFSFIGHGN 337
Query: 329 VKIDKHVEFPLELDLKPY--TSGGQNSDV------------ELKYHLYAIVEHMGSSPTC 374
K K +++ LD+ Y T NS V Y L+++V H G S +
Sbjct: 338 RKPYKSIKYNEVLDMSSYMTTKNTCNSQVYTPDNSLDTCRQSFIYDLWSVVCHSGGSLSG 397
Query: 375 GHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQ--DAYILFYAKQGT-EWVSSLLEA--- 428
GHY++Y + + W+ ND V + VLS+ AY+LFYA++ ++ + + A
Sbjct: 398 GHYYTYAKGLNNQWYCFNDETVRISKSSEVLSETIGAYLLFYAQRNQLQFNETFILAPDV 457
Query: 429 ----ESIGMN-ADISNSSPKSVLDNVENDYTSRSG 458
+S G++ DI S K+ N E D+TS G
Sbjct: 458 PLCLKSSGLDFGDIEFESSKT---NTEADFTSNDG 489
>gi|119194659|ref|XP_001247933.1| hypothetical protein CIMG_01704 [Coccidioides immitis RS]
gi|392862828|gb|EAS36501.2| ubiquitin C-terminal hydrolase [Coccidioides immitis RS]
Length = 490
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 102/329 (31%), Positives = 159/329 (48%), Gaps = 37/329 (11%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLG TC++N I+Q H PL+ + H +E C +C + + +
Sbjct: 171 GLYNLGQTCYMNVIMQTLFHE-PLLTSY-FLGHGHRIYDCSEANCFVCQVAETF-----A 223
Query: 169 SGKVLSPRKLVDNLNYISSFFQR------YQQEDAHEFLQCLLDRLESCCLDSKTKDESL 222
++ + LN + S +Q YQQ+DAHEF Q L+++L + D + +
Sbjct: 224 EFNNDEKQEGFNCLNLLLSSWQSSPDLAGYQQQDAHEFYQFLVNKLHATAED---RVDGY 280
Query: 223 SSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSL----------------EIED 266
+ + F G L S + C NCG+ + T +P++DLSL E +
Sbjct: 281 DQRCRCFFHKAFFGKLQSSVTCHNCGNTNRTEDPIMDLSLAFQVQRKKKALHWTPGESDT 340
Query: 267 VGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGS 326
+L LES+T E++ P + ++C C KQL L +P + LKRF+ S
Sbjct: 341 TPTLNGCLESYTAPEEL--PASDYSCSWCGTPQGATKQLRLRNLPVILCMQLKRFERHRS 398
Query: 327 YVVKIDKHVEFPLELDLKPYTSGGQNSDV-ELKYHLYAIVEHMGSSPTCGHYFSYIRSSP 385
K+D V FPL +++ PYT+ + +V + Y L ++V H+G + GHY +Y R
Sbjct: 399 VSEKVDAKVSFPLSINMAPYTTRSHSKNVLKYTYDLLSVVVHIGDIDS-GHYLAYCRQG- 456
Query: 386 DTWHRLNDSRVTRVEEEFVLSQDAYILFY 414
+ W + ND RVT E VL DAY+LFY
Sbjct: 457 ELWFKFNDDRVTWATEAEVLDADAYLLFY 485
>gi|255580900|ref|XP_002531269.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
gi|223529154|gb|EEF31133.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
Length = 369
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 112/350 (32%), Positives = 167/350 (47%), Gaps = 47/350 (13%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICA--LRDHIELSL 166
GLEN GNTC+ N++LQ +P + L + G E + C L I
Sbjct: 24 GLENFGNTCYCNSVLQALYFCVPFREQLLEYYANNKSGGDAEENLLTCLADLFTQISSQK 83
Query: 167 ASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLL----DRLESCCLDSKTKDESL 222
+G V++P++ V L + F+ Y +DAHEFL LL D LE +K+ E+
Sbjct: 84 KKTG-VIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILEKEAQAAKSDPETS 142
Query: 223 SS-----------QGDNI--------VQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE 263
SS Q + + V + F G L ++ +C C + + E DLSL+
Sbjct: 143 SSPEKIPNGPKNGQANGVSKEPLVTWVHKNFQGILTNETRCLQCETVTARDETFFDLSLD 202
Query: 264 IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKT 323
IE S+ S L++F+ E + + E KF C+KC +K++ + K P + HLKRFK
Sbjct: 203 IEQNSSITSCLKNFSSTETL-NAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKY 261
Query: 324 --DGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYI 381
S K+ V FPLEL L ++ ++SD+E Y L+A+V H+GS P GHY S +
Sbjct: 262 IEQLSRYKKLSYRVVFPLELKL---SNTVEDSDIE--YSLFAVVVHVGSGPNHGHYVSLV 316
Query: 382 RSSPDTWHRLNDSRVTRVEEE-----FVLSQD-------AYILFYAKQGT 419
+S + W +D V ++E F SQ+ YILFY G
Sbjct: 317 KSH-NHWLFFDDENVEMIDESAVQTFFGSSQEYSSNTDHGYILFYESLGA 365
>gi|303311081|ref|XP_003065552.1| Ubiquitin carboxyl-terminal hydrolase family protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240105214|gb|EER23407.1| Ubiquitin carboxyl-terminal hydrolase family protein [Coccidioides
posadasii C735 delta SOWgp]
gi|320039363|gb|EFW21297.1| ubiquitin C-terminal hydrolase Ubp8 [Coccidioides posadasii str.
Silveira]
Length = 490
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/329 (31%), Positives = 159/329 (48%), Gaps = 37/329 (11%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLG TC++N I+Q H PL+ + H +E C +C + + +
Sbjct: 171 GLYNLGQTCYMNVIMQTLFHE-PLLTSY-FLGHGHRIYDCSEANCFVCQVAETF-----A 223
Query: 169 SGKVLSPRKLVDNLNYISSFFQR------YQQEDAHEFLQCLLDRLESCCLDSKTKDESL 222
++ + LN + S +Q YQQ+DAHEF Q L+++L + D + +
Sbjct: 224 EFNNDEKQEGFNCLNLLLSSWQSSPDLAGYQQQDAHEFYQFLVNKLHATAED---RVDGY 280
Query: 223 SSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSL----------------EIED 266
+ + F G L S + C NCG+ + T +P++DLSL E +
Sbjct: 281 DQRCRCFFHKAFFGKLQSSVTCHNCGNTNRTEDPIMDLSLAFQVQRKKKALHWTPGESDT 340
Query: 267 VGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGS 326
+L LES+T E++ P + ++C C KQL L +P + LKRF+ S
Sbjct: 341 TPTLNGCLESYTAPEEL--PASDYSCSWCGTPQGATKQLRLRNLPVILCMQLKRFERHRS 398
Query: 327 YVVKIDKHVEFPLELDLKPYTSGGQNSDV-ELKYHLYAIVEHMGSSPTCGHYFSYIRSSP 385
K+D V FPL +++ PYT+ + +V + Y L ++V H+G + GHY +Y R
Sbjct: 399 VSEKVDAKVSFPLSINMAPYTTRSHSKNVLKYTYDLLSVVVHIGDIDS-GHYLAYCRQG- 456
Query: 386 DTWHRLNDSRVTRVEEEFVLSQDAYILFY 414
+ W + ND RVT E VL DAY+LFY
Sbjct: 457 ELWFKFNDDRVTWATEAEVLDADAYLLFY 485
>gi|296417169|ref|XP_002838233.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295634156|emb|CAZ82424.1| unnamed protein product [Tuber melanosporum]
Length = 1078
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 117/363 (32%), Positives = 164/363 (45%), Gaps = 64/363 (17%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALR--------SFDHPRPCDGA-TEGFCVICALR 159
GL+NLGNTC++NA+LQC + T+PL + S D+P G E F I
Sbjct: 721 GLKNLGNTCYMNAVLQCMSGTIPLSRYFLDGSYKSHVSKDNPLGSRGVLAEAFAAIVRHL 780
Query: 160 DHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLD------------- 206
E S +SP + D ++ F+ Q+DA EFL+ LLD
Sbjct: 781 WSGEYSF------ISPITIKDVAGRLNEMFRNNDQQDAQEFLEFLLDGLHEDLNPHANHG 834
Query: 207 RLESCCLDSKTKDESLSSQGDNIV--QRV-----------FGGCLISKLQCCNCGSCSDT 253
+L D + + E L Q +I+ QR F G L S L C CG S T
Sbjct: 835 KLRPLNDDEECRRERLPVQLASIIEWQRYTHHNYSVVVNWFQGQLSSMLSCLTCGRTSTT 894
Query: 254 YEPLIDLSLEIEDVGS----LGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDK 309
Y P + LSL I S L LE F E +E + + C +CK+ K+L + +
Sbjct: 895 YSPFMYLSLPIPATKSNNFTLRDCLEEFVGEETLEGNDA-WLCPRCKKARKATKKLTITR 953
Query: 310 VPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE-LDLKPYTSGGQNSD-------------- 354
+P + HLKRF G + K++ V+ PL LDL Y SD
Sbjct: 954 LPHILIIHLKRFTNRGPWRDKLNTFVDIPLRHLDLTKYMPPPLASDELPRTLPPPTAETT 1013
Query: 355 VELKYHLYAIVEHMGSSPTCGHYFSYIRSS-PDTWHRLNDSRVTRVEEEFVLSQDAYILF 413
Y LYAI H G+ GHY + +RSS W+ +DS+ T VEEE V +++AY+LF
Sbjct: 1014 PPFFYDLYAICNHYGTI-NGGHYTAVVRSSCKGGWNSFDDSKATLVEEERV-TKNAYVLF 1071
Query: 414 YAK 416
+ +
Sbjct: 1072 WVR 1074
>gi|7670525|dbj|BAA95110.1| unnamed protein product [Mus musculus]
Length = 393
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 118/338 (34%), Positives = 160/338 (47%), Gaps = 39/338 (11%)
Query: 108 AGLENLGNTCFINAILQCFTHTLPL----VQALRSFDHPRPCDGATEGFCVICALRDHIE 163
AGL NLGNTCF+N+ILQC ++T L +Q L D T L I
Sbjct: 55 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLGHTSSAHTALMEEFAKLIQTIW 114
Query: 164 LSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLES----CCLDSKTKD 219
S S V+SP + + + F Y Q+DA EFL+ LLD L + K
Sbjct: 115 TS--SPNDVVSPSEFKTQIQRYAPRFMGYNQQDAQEFLRFLLDGLHNEVNRVAARPKASP 172
Query: 220 ESLS----------------SQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE 263
E+L + D+ + +F G L S L C +CG CS ++P DLSL
Sbjct: 173 ETLDHLPDEEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLP 232
Query: 264 IEDVG----SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLK 319
I G +L + FTK E I D + K TC +C+ + K+ + + P + HLK
Sbjct: 233 IAKRGYPEVTLMDCMRLFTK-EDILDGDEKPTCCRCRARKRCIKKFSVQRFPKILVLHLK 291
Query: 320 RFKTDGSYVVKIDKHVEFPL-ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYF 378
RF K+ V FPL +LDL+ + S N V Y+LYA+ H G++ GHY
Sbjct: 292 RFSESRIRTSKLTTFVNFPLRDLDLREFASENTNHAV---YNLYAVSNHSGTT-MGGHYT 347
Query: 379 SYIRSSPDT--WHRLNDSRVTRVEEEFVLSQDAYILFY 414
+Y R SP T WH NDS VT + V + DAY+LFY
Sbjct: 348 AYCR-SPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFY 384
>gi|348574069|ref|XP_003472813.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 2
[Cavia porcellus]
Length = 396
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 119/346 (34%), Positives = 167/346 (48%), Gaps = 46/346 (13%)
Query: 103 PTGVGAGLENLGNTCFINAILQCFTHTLPL----VQAL--RSFDHPRPC-DGATEGFCVI 155
P G+ AGL NLGNTCF+N+ILQC ++T L +Q L R H G E F +
Sbjct: 54 PQGL-AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHTSSVHTGLMEEFAKL 112
Query: 156 CALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLES----C 211
+ + V+SP + + + F Y Q+DA EFL+ LLD L +
Sbjct: 113 IQ-----TIWTSCPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRV 167
Query: 212 CLDSKTKDESLS----------------SQGDNIVQRVFGGCLISKLQCCNCGSCSDTYE 255
+ K+ E+L + D+ + +F G L S L C +CG CS ++
Sbjct: 168 AVRPKSSHENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFD 227
Query: 256 PLIDLSLEIEDVG----SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVP 311
P DLSL I G +L + FTK E I D + K TC +C+ + K+ + + P
Sbjct: 228 PFWDLSLPIAKRGYPEVTLMDCMRLFTK-EDILDGDEKPTCCRCRARKRCIKKFSIQRFP 286
Query: 312 SVAAFHLKRFKTDGSYVVKIDKHVEFPL-ELDLKPYTSGGQNSDVELKYHLYAIVEHMGS 370
+ HLKRF K+ V FPL +LDL+ + S N V Y+LYA+ H G+
Sbjct: 287 KILVLHLKRFSESRIRTSKLSTFVNFPLRDLDLREFASENTNHAV---YNLYAVSNHSGT 343
Query: 371 SPTCGHYFSYIRSSPDT--WHRLNDSRVTRVEEEFVLSQDAYILFY 414
+ GHY +Y R SP T WH NDS VT + V + DAY+LFY
Sbjct: 344 T-MGGHYTAYCR-SPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFY 387
>gi|363754463|ref|XP_003647447.1| hypothetical protein Ecym_6248 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891084|gb|AET40630.1| hypothetical protein Ecym_6248 [Eremothecium cymbalariae
DBVPG#7215]
Length = 466
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 112/334 (33%), Positives = 170/334 (50%), Gaps = 33/334 (9%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL N+G+TCF+++++Q H ++Q + H CD CV CA+ D I +L
Sbjct: 137 GLVNMGSTCFMSSVIQTLVHIPHVLQHVLKQTHQSTCDIQDSIACVSCAV-DEIVANLYG 195
Query: 169 SGKVLSPRKL-VDNLNYISSFFQR---------------------YQQEDAHEFLQCLLD 206
K + K V ++ISS F R Y Q+DAHEF Q LL+
Sbjct: 196 YPKPNAVTKSSVGQYSHISSTFSRQQKGFIDLLTCSWKINKNLAGYTQQDAHEFWQFLLN 255
Query: 207 RLESCCLDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDT-YEPLIDLSLEIE 265
+L S + + K S +S + I+ +F G L S + C C + S T +P++DLSL I+
Sbjct: 256 QLHSDHVRAH-KPSSNNSNCECILHLLFQGYLESNIACSECHTNSKTTVDPIMDLSLGIQ 314
Query: 266 DVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK--T 323
+ +L L SF K E + D + C+KCK + +QL K+P V LKRF+
Sbjct: 315 NKSTLHECLNSFHKREPLTD--FNYCCKKCKSTKNPIRQLTTAKLPPVLMLQLKRFEHLM 372
Query: 324 DGSYVVKIDKHVEFPLELDLKPYTS--GGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYI 381
+G+ VKI+ ++ FPL L++K Y + + Y L AI+ H G+ GHY +
Sbjct: 373 NGT-SVKINDYISFPLHLNMKDYCKPVDCLHPVPNMMYKLSAIISHHGTVHQ-GHYTTIC 430
Query: 382 RSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYA 415
R + D W + NDS VT + EE +L + AY+L+Y
Sbjct: 431 RINGDIWAKFNDSMVTVISEEDMLKEQAYLLYYV 464
>gi|312091085|ref|XP_003146855.1| ubiquitin carboxyl-terminal hydrolase [Loa loa]
gi|307757982|gb|EFO17216.1| ubiquitin carboxyl-terminal hydrolase [Loa loa]
Length = 497
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/338 (30%), Positives = 158/338 (46%), Gaps = 33/338 (9%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q HT L + H ++ C++C L + +
Sbjct: 157 GLVNLGNTCFMNCIIQAIVHTPHLKDYFLTDQHHCASSSYSKAQCLMCELSNTFQEFYKG 216
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDN 228
P + ++ + + Y+Q+DAHEF LD L + S ++ +
Sbjct: 217 DVTPYKPNRFLNLVWTHARHLAGYEQQDAHEFFIAALDVLHR--HSGSSSLPSTPNECNC 274
Query: 229 IVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEI-EDVGSLGSALESFTKLEKIED-- 285
I+ +F G L S L C CG S T +P D+SL++ ++V S+ + +ED
Sbjct: 275 IIDWIFTGKLQSDLTCSICGCVSTTVDPFWDISLDVAQEVLRSPSSSSGSLQQITLEDCL 334
Query: 286 -----PE-----TKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHV 335
PE K C +C+ KQL L +P VA FHLKRF+ K+D +
Sbjct: 335 HRYIMPEHLGSNAKTKCARCETYEESTKQLTLKTLPMVACFHLKRFEHSHKDRKKMDTKI 394
Query: 336 EFPLELDLKPYT-------SGGQNSDVEL----------KYHLYAIVEHMGSSPTCGHYF 378
++P +D+ P+T +G + + KY L+A+V H+G+ + GHY
Sbjct: 395 KYPQFIDMTPFTASFRERSTGAPQNKTSVVTDLLTTNRNKYELFAVVNHLGTMES-GHYT 453
Query: 379 SYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAK 416
YIR + W + +D +VT+V E VLS Y+LFY K
Sbjct: 454 CYIRHQRNQWFQCDDQKVTKVPTERVLSSQGYLLFYHK 491
>gi|402912520|ref|XP_003918809.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like, partial [Papio anubis]
Length = 332
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/234 (33%), Positives = 132/234 (56%), Gaps = 8/234 (3%)
Query: 185 ISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDNIVQRVFGGCLISKLQC 244
+++ F R +Q DAHEFL ++D ++ CL K S+ ++ ++FGGC S+++C
Sbjct: 1 MAAGFHRGKQADAHEFLMFIVDAMKKACLPGH-KQVDHDSEDTTLIHQIFGGCWRSQIKC 59
Query: 245 CNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQ 304
+C SDT++P +D++L+I+ S+ ALE K E++ + E + C C ++ K
Sbjct: 60 LHCQGVSDTFDPYLDIALDIQAAQSVKQALEQVVKPEEL-NGENAYHCGLCLQKAPASKT 118
Query: 305 LMLDKVPSVAAFHLKRFK-TDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYA 363
L V LKRF G+ K+ K+V++P LD++PY S Q + L Y LYA
Sbjct: 119 FTLHTSAKVLILVLKRFSDVTGN---KLAKNVQYPECLDMQPYMS--QQNTGPLVYVLYA 173
Query: 364 IVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQ 417
++ H G GHY SY+++ W++++D+ +T VLSQ AY+LFY ++
Sbjct: 174 VLVHAGWCCHNGHYLSYVKAPGGQWYKMDDAEITACSIASVLSQQAYVLFYIQK 227
>gi|356512699|ref|XP_003525054.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Glycine
max]
Length = 369
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/351 (31%), Positives = 166/351 (47%), Gaps = 49/351 (13%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSF--DHPRPCDGATEGFCVICALRDHIELSL 166
GLEN GNTC+ N++LQ +P + L + ++ DG + L I
Sbjct: 24 GLENFGNTCYCNSVLQALYFCVPFREQLLEYYGNNKSILDGEENLLTCLADLFSQISSQK 83
Query: 167 ASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLL----DRLESCCLDSKTKDES- 221
+G V++P++ V L + F+ Y +DAHEFL LL D LE +KT E+
Sbjct: 84 KKTG-VIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILEKEAQAAKTDQETS 142
Query: 222 ----------LSSQGDNI--------VQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE 263
+ Q + + V + F G L ++ +C C + + E +DLSL+
Sbjct: 143 PPSEKAVNGPKNGQANGVHKEPLVTWVHKNFQGILTNETRCLQCETVTARDETFLDLSLD 202
Query: 264 IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKT 323
IE S+ S L++F+ E + + E KF C+KC +K++ + K P + HLKRFK
Sbjct: 203 IEQNSSITSCLKNFSSTETL-NAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKY 261
Query: 324 D---GSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSY 380
G Y K+ V FPLEL L D +++Y L+A+V H+GS P GHY S
Sbjct: 262 MEQLGRY-KKLSYRVVFPLELKLSNTV-----EDADIEYSLFAVVVHVGSGPNHGHYVSL 315
Query: 381 IRSSPDTWHRLNDSRVTRVEEE-----FVLSQD-------AYILFYAKQGT 419
++S + W +D V ++E F SQ+ YILFY G+
Sbjct: 316 VKSH-NHWLFFDDENVEMIDESAVQTFFGSSQEYSSNTDHGYILFYESLGS 365
>gi|16552833|dbj|BAB71388.1| unnamed protein product [Homo sapiens]
Length = 605
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 116/341 (34%), Positives = 164/341 (48%), Gaps = 45/341 (13%)
Query: 108 AGLENLGNTCFINAILQCFTHTLPL----VQAL--RSFDHPRPCDGATEGFCVICALRDH 161
AGL NLGNTCF+N+ILQC ++T L +Q L R H G+ ++
Sbjct: 267 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHH-----GSNAHTALVEEFAKL 321
Query: 162 IELSLASS-GKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLES----CCLDSK 216
I+ SS V+SP + + + F Y Q+DA EFL+ LLD L + L K
Sbjct: 322 IQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPK 381
Query: 217 TKDESLS----------------SQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDL 260
+ E+L + D+ + +F G L L C +CG CS ++P DL
Sbjct: 382 SNPENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKGSLTCTDCGYCSTVFDPFWDL 441
Query: 261 SLEIEDVG----SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAF 316
SL I G +L + FTK E + D + K TC +C+ + K+ + + P +
Sbjct: 442 SLPIAKRGYPEVTLMDCMRLFTK-EDVLDGDEKPTCCRCRGRKRCIKKFSIQRFPKILVL 500
Query: 317 HLKRFKTDGSYVVKIDKHVEFPL-ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCG 375
LKRF K+ V FPL +LDL+ + S N V Y+LYA+ H G++ G
Sbjct: 501 RLKRFSESRIRTSKLTTFVNFPLRDLDLREFASENTNHAV---YNLYAVSNHSGTT-MGG 556
Query: 376 HYFSYIRSSPDT--WHRLNDSRVTRVEEEFVLSQDAYILFY 414
HY +Y R SP T WH NDS VT + V + DAY+LFY
Sbjct: 557 HYTAYCR-SPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLFY 596
>gi|356525469|ref|XP_003531347.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like isoform 1
[Glycine max]
Length = 369
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/351 (31%), Positives = 166/351 (47%), Gaps = 49/351 (13%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSF--DHPRPCDGATEGFCVICALRDHIELSL 166
GLEN GNTC+ N++LQ +P + L + ++ DG + L I
Sbjct: 24 GLENFGNTCYCNSVLQALYFCVPFREQLLEYYGNNKSILDGEENLLTCLADLFSQISSQK 83
Query: 167 ASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLL----DRLESCCLDSKTKDES- 221
+G V++P++ V L + F+ Y +DAHEFL LL D LE +KT E+
Sbjct: 84 KKTG-VIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILEKEAQAAKTDQETS 142
Query: 222 ----------LSSQGDNI--------VQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE 263
+ Q + + V + F G L ++ +C C + + E +DLSL+
Sbjct: 143 PPSEKAVNGPKNGQANGVHKEPLVTWVHKNFQGILTNETRCLQCETVTARDETFLDLSLD 202
Query: 264 IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKT 323
IE S+ S L++F+ E + + E KF C+KC +K++ + K P + HLKRFK
Sbjct: 203 IEQNSSITSCLKNFSSTETL-NAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKY 261
Query: 324 D---GSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSY 380
G Y K+ V FPLEL L D +++Y L+A+V H+GS P GHY S
Sbjct: 262 MEQLGRY-KKLSYRVVFPLELKLSNTV-----EDADIEYSLFAVVVHVGSGPNHGHYVSL 315
Query: 381 IRSSPDTWHRLNDSRVTRVEEE-----FVLSQD-------AYILFYAKQGT 419
++S + W +D V ++E F SQ+ YILFY G+
Sbjct: 316 VKSH-NHWLFFDDENVEMIDESAVQTFFGSSQEYSSNTDHGYILFYESIGS 365
>gi|259490298|ref|NP_001159183.1| uncharacterized protein LOC100304268 [Zea mays]
gi|195627604|gb|ACG35632.1| ubiquitin carboxyl-terminal hydrolase 4 [Zea mays]
gi|223942511|gb|ACN25339.1| unknown [Zea mays]
gi|414586948|tpg|DAA37519.1| TPA: putative ubiquitin carboxyl-terminal hydrolase superfamily
protein [Zea mays]
Length = 368
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 107/348 (30%), Positives = 162/348 (46%), Gaps = 46/348 (13%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GLEN GNTC+ N++LQ +P + L + G E + C +++S A
Sbjct: 26 GLENFGNTCYCNSVLQALYFCIPFREQLLEYYANNKTPGDVEENLLTCLADLFMQISQAK 85
Query: 169 SGK-VLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL--DSKTKDESLSSQ 225
V++P++ V + + F+ Y +DAHEFL LL+ L S KD SS
Sbjct: 86 KKTGVIAPKRFVQRVKKQNELFRSYMHQDAHEFLNFLLNELVDILEKESSAAKDSPQSSS 145
Query: 226 GD--------------------NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE 265
+ +V + F G L ++ +C C + + E +DLS++IE
Sbjct: 146 PEKAPNGPVQPLANGVKKEPPVTLVHKNFQGILTNETRCLRCETVTARDETFLDLSVDIE 205
Query: 266 DVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTD- 324
S+ S L++F E + + E KF C+KC +K++ + K P + HLKRFK
Sbjct: 206 QNSSITSCLKNFCSTETL-NAEDKFFCDKCCSLQEAQKRMKIKKAPHILVIHLKRFKYIE 264
Query: 325 --GSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIR 382
G Y K+ V FP+EL L + DV+ +Y L+A+V H+GS P GHY S ++
Sbjct: 265 QLGRYK-KLSYRVVFPMELKL-----SNTSDDVDTEYSLFAVVVHVGSGPNHGHYVSLVK 318
Query: 383 SSPDTWHRLNDSRVTRVEEE-----FVLSQD-------AYILFYAKQG 418
S + W +D V VEE+ F S + YILFY G
Sbjct: 319 SH-NHWLFFDDENVEMVEEQTLQTFFGSSHEYSGNTDHGYILFYEGLG 365
>gi|168066124|ref|XP_001784993.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663451|gb|EDQ50214.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 324
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 156/341 (45%), Gaps = 50/341 (14%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF N+++Q L V+ LR E C+ + +
Sbjct: 1 GLMNLGNTCFFNSVMQ----NLVGVRMLREHFGKETIAQEVERSIRTCSF------GIGN 50
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLE-----------------SC 211
G +SP+ L + + F+ +QQ+D+HE L+CLLD L
Sbjct: 51 VGSAVSPKILFSEICKKAPRFRGFQQQDSHELLRCLLDGLHMEEESIRKAQFGMDKKVES 110
Query: 212 CLDSKTKDESLS-----SQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIED 266
DS +KDE S + D +V+ +FGG S + CC CG S YEP +DLSL I
Sbjct: 111 GADSNSKDEDGSLEKAPKKPDTLVEYMFGGQYSSTVTCCECGHSSVVYEPFLDLSLPIPS 170
Query: 267 VGSLGSALESFTK---LEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKT 323
S G E + +K+E TK K K+L++ K P V HLKRF
Sbjct: 171 KQSFGKTAEPIGEEIGKKKLEKDVTKMVSVK----RDATKRLLISKAPLVLTVHLKRFAQ 226
Query: 324 DG-SYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIR 382
D + K+ H+ F ELDL P+ Q+ + Y L VEH G+ GHY +Y++
Sbjct: 227 DTYGRLSKLGGHITFHEELDLGPFID--QSIKQDGVYQLIGTVEHSGTM-RGGHYVAYVK 283
Query: 383 SSPD-------TWHRLNDSRVTRVEEEFVLSQDAYILFYAK 416
+ TW+ ++DS V + + VL +AY+LFY +
Sbjct: 284 GESEDSTEGKSTWYYISDSHVRKTSLDDVLQSEAYLLFYER 324
>gi|260946429|ref|XP_002617512.1| hypothetical protein CLUG_02956 [Clavispora lusitaniae ATCC 42720]
gi|238849366|gb|EEQ38830.1| hypothetical protein CLUG_02956 [Clavispora lusitaniae ATCC 42720]
Length = 515
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 112/332 (33%), Positives = 166/332 (50%), Gaps = 37/332 (11%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFD----HPRPCDGATE-----------GFC 153
G+ NLG TCF++ ILQ H PLV R F H CD ++ C
Sbjct: 190 GIVNLGATCFMSCILQTLLHN-PLV--CRHFFNNDLHFFNCDSSSRYAAPSPQIDENSAC 246
Query: 154 VICALRDHI--ELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESC 211
+ C+L D + E+ +S+ L+ Y + +Q++DAHEF Q LL L S
Sbjct: 247 MTCSL-DAVFKEVYTSSARDGCGIATLLATAWYKNQSLAGFQEQDAHEFWQFLLGELHS- 304
Query: 212 CLDSKTKDESLSSQGDN---IVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDV- 267
D + ES + +V F G L S + C CG+ + T +PL+DLSLEI +
Sbjct: 305 --DYERVAESAGLPQEPCRCVVHSTFAGQLESSVVCSACGAITRTVDPLMDLSLEISRLD 362
Query: 268 --GSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK-TD 324
+L L+ FT+ E + + K+ C C+E+ + L + +P V + LKRFK T
Sbjct: 363 GKATLYDCLDQFTRHEPL---DAKYRCSSCREEAQAHRALRIKALPPVISIQLKRFKHTV 419
Query: 325 GS-YVVKIDKHVEFPLELDLKPYTSGGQNS-DVELKYHLYAIVEHMGSSPTCGHYFSYIR 382
GS KI+ V+ PL L+L Y S + D Y L+A+V H+GS T GHY + ++
Sbjct: 420 GSDTASKIEARVDAPLFLNLSKYASQHDDDIDANKVYELFAVVNHVGSVST-GHYIALVK 478
Query: 383 SSPDTWHRLNDSRVTRVEEEFVLSQDAYILFY 414
SS W + +DS ++ V E V + +AY+LFY
Sbjct: 479 SSGGRWFKFDDSVISLVSHEEVQATNAYLLFY 510
>gi|55742515|ref|NP_001006783.1| ubiquitin thiolesterase 3 [Xenopus (Silurana) tropicalis]
gi|49523089|gb|AAH75590.1| ubiquitin specific peptidase 3 [Xenopus (Silurana) tropicalis]
Length = 467
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 119/359 (33%), Positives = 169/359 (47%), Gaps = 53/359 (14%)
Query: 107 GAGLENLGNTCFINAILQ---------CFTHTLPLVQ------ALRSFDHPRPCDGATEG 151
GL NLGNTCF+NAILQ C+ LP V+ A R H R
Sbjct: 105 ATGLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRTYHTR--SQGDVN 162
Query: 152 FCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRL--- 208
++ R + + SP L + I F+ YQQ+DAHEF++ LLD L
Sbjct: 163 VSLVEEFRKTLCALWQGNQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE 222
Query: 209 --------------ESCCLDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTY 254
++ C S + ++ +V VFGG L +++ C CG+ S +
Sbjct: 223 LQGEFDGSSHSVLSQANCSRSASNKCCING-ASTVVTSVFGGVLQNEVNCLICGTESRKF 281
Query: 255 EPLIDLSLEI-----------EDVG---SLGSALESFTKLEKIEDPETKFTCEKCKEQVS 300
+P +DLSL+I ++ G +L L SFT LE++++ E +TC KCK++
Sbjct: 282 DPFLDLSLDIPSQFRNKRCKNQENGPTCTLRDCLRSFTDLEELDETEL-YTCLKCKKKQK 340
Query: 301 VEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE-LDLKPYTSGGQNSDVE-LK 358
K+ + K+P V HLKRF K+D +V+FPL LD+K + +N E
Sbjct: 341 STKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVDFPLRGLDMKSFLLEPENIGPESCL 400
Query: 359 YHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQ 417
Y L A+V H GS GHY +Y + W NDS VT EEE V AYILFY ++
Sbjct: 401 YDLAAVVVHHGSGVGSGHYTAYA-THKGRWFHFNDSTVTLTEEETVAKAKAYILFYVER 458
>gi|74179937|dbj|BAE36525.1| unnamed protein product [Mus musculus]
Length = 482
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 119/350 (34%), Positives = 161/350 (46%), Gaps = 63/350 (18%)
Query: 107 GAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSL 166
GL NLGNTCF+NAILQ LV+ R +CAL
Sbjct: 158 ATGLRNLGNTCFMNAILQSLR---SLVEEFRK---------------TLCAL-------W 192
Query: 167 ASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLE------------SCCLD 214
S SP L + I F+ YQQ+DAHEF++ LLD L S L
Sbjct: 193 QGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQ 252
Query: 215 SKT----KDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIED---- 266
K+ ++ + +V +FGG L +++ C CG+ S ++P +DLSL+I
Sbjct: 253 EKSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRS 312
Query: 267 ----------VGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAF 316
V SL L SFT LE++++ E + C KCK++ K+ + K+P
Sbjct: 313 KRSKNQENGPVCSLRDCLRSFTDLEELDETEL-YMCHKCKKKQKSTKKFWIQKLPKALCL 371
Query: 317 HLKRFKTDGSYVVKIDKHVEFPLE-LDLKPYTSGGQNSDVE-LKYHLYAIVEHMGSSPTC 374
HLKRF K+D +V+FPL LD+K Y +NS + Y L A+V H GS
Sbjct: 372 HLKRFHWTAYLRNKVDTYVQFPLRGLDMKCYLLEPENSGPDSCLYDLAAVVVHHGSGVGS 431
Query: 375 GHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFY----AKQGTE 420
GHY +Y W NDS VT +EE V AYILFY A+ G E
Sbjct: 432 GHYTAYA-VHEGRWFHFNDSTVTVTDEETVGKAKAYILFYVERQARAGAE 480
>gi|307169377|gb|EFN62098.1| Ubiquitin carboxyl-terminal hydrolase 42 [Camponotus floridanus]
Length = 785
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/268 (33%), Positives = 138/268 (51%), Gaps = 11/268 (4%)
Query: 151 GFCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLES 210
G C+ CA+ ++ S SG + P + + L I QQEDAHEFL+ LL+ +E
Sbjct: 66 GECLTCAVAKTLQFSHQKSGGAIKPFYIFNKLKLICRTMVPGQQEDAHEFLRYLLEGMER 125
Query: 211 CCLD--SKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVG 268
L TK +S S + I Q +FGG + ++++C C S T++ DL ++I
Sbjct: 126 TYLTRHKATKLDSYSKETTPINQ-IFGGYIRTEVKCLQCQHVSTTFQHFQDLLVDIRKAN 184
Query: 269 SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYV 328
+L AL S+ E++++ + + CE CK +V KQ L++ P V LKRF G
Sbjct: 185 TLDEALNSYFSREQLDNND--YKCEACKRRVPATKQFTLERPPKVLCVQLKRFSVLGG-- 240
Query: 329 VKIDKHVEFPLELDLKPY--TSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPD 386
KI +H+ F +D+ PY G+ S L Y L ++V HMG S CGHY + + S
Sbjct: 241 -KISRHIGFKQTIDMSPYLWREPGE-SPRPLTYKLMSMVTHMGPSVNCGHYTAIAQVSSG 298
Query: 387 TWHRLNDSRVTRVEEEFVLSQDAYILFY 414
++ +D V + VLS +AYI+ +
Sbjct: 299 QYYSFDDCCVRPISLNNVLSTNAYIMIF 326
>gi|417400194|gb|JAA47059.1| Putative ubiquitin carboxyl-terminal hydrolase 2 [Desmodus
rotundus]
Length = 396
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 120/344 (34%), Positives = 162/344 (47%), Gaps = 39/344 (11%)
Query: 102 KPTGVGAGLENLGNTCFINAILQCFTHTLPL----VQALRSFDHPRPCDGATEGFCVICA 157
K T AGL NLGNTCF+N+ILQC ++T L +Q L D + T
Sbjct: 52 KSTQGLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHSSNAHTALMEEFAK 111
Query: 158 LRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCC----- 212
L I S S V+SP + + + F Y Q+DA EFL+ LLD L +
Sbjct: 112 LIQTIWTS--SLNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNAVNRVTV 169
Query: 213 --------LDSKTKDESLSSQGDNIVQR-------VFGGCLISKLQCCNCGSCSDTYEPL 257
LD DE ++R +F G L S L C +CG CS ++P
Sbjct: 170 RPKSNPENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPF 229
Query: 258 IDLSLEIEDVG----SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSV 313
DLSL I G +L + FTK E + D + K TC +C+ + K+ + + P +
Sbjct: 230 WDLSLPIAKRGYPEVTLMDCMRLFTK-EDVLDGDEKPTCCRCRTRKRCIKKFSIQRFPKI 288
Query: 314 AAFHLKRFKTDGSYVVKIDKHVEFPL-ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSP 372
HLKRF K+ V FPL +LDL+ + S N V Y+LYA+ H G++
Sbjct: 289 LVLHLKRFSESRIRTSKLTTFVNFPLRDLDLREFASETTNHAV---YNLYAVSNHSGTT- 344
Query: 373 TCGHYFSYIRSSPDT--WHRLNDSRVTRVEEEFVLSQDAYILFY 414
GHY +Y R SP T WH NDS VT + V + DAY+LFY
Sbjct: 345 VGGHYTAYCR-SPVTGEWHTFNDSSVTSMFSSQVRTSDAYLLFY 387
>gi|405953224|gb|EKC20928.1| Ubiquitin carboxyl-terminal hydrolase 22 [Crassostrea gigas]
Length = 534
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/374 (29%), Positives = 159/374 (42%), Gaps = 63/374 (16%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLGNTCF+N I+Q HT L + H C++C + + +
Sbjct: 161 GLINLGNTCFMNCIVQSLIHTPVLRDFFLADKHNCQMTSVEAQQCLVCEMARLFQEFYSG 220
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL---DSKTKDESLSSQ 225
+ P +L+ + + Y+Q+DAHEFL LD L C D+K +
Sbjct: 221 NRTPHIPYRLLHLVWTNARHLAGYEQQDAHEFLIAALDVLHRHCKGYSDNKCLSINKFFT 280
Query: 226 GDN------------IVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEI--------- 264
G N I+ ++F G L S + C C + S T +P+ D+SL++
Sbjct: 281 GRNGMTSGNPHHCNCIIDQIFTGGLQSDVTCQECNNVSTTIDPIWDISLDLGPGAPIPNA 340
Query: 265 ---------------------EDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEK 303
+ SL L+ FTK E + K C C K
Sbjct: 341 LLNVNNSSSSPSSGFSNSPGTYEPTSLLDCLKRFTKPEHL-GSSAKIKCSTCHSYQESTK 399
Query: 304 QLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPYTSGGQNS---------- 353
QL + K+P VA FHLKRF+ KI V FP ELD+ P+ S +N+
Sbjct: 400 QLTMKKLPIVACFHLKRFEHSTGLHKKISTFVSFPEELDMTPFMSSSRNNTNGYRNQIVQ 459
Query: 354 ------DVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQ 407
+ KY L+A+V HMG+ CGHY +IR D W + +D +T+ VL
Sbjct: 460 ESAKGLSCDNKYSLFAVVNHMGTIE-CGHYTCFIRQHKDQWFKCDDHLITKATLNEVLKS 518
Query: 408 DAYILFYAKQGTEW 421
+ Y+LFY KQ E+
Sbjct: 519 EGYLLFYHKQILEY 532
>gi|190347225|gb|EDK39462.2| hypothetical protein PGUG_03560 [Meyerozyma guilliermondii ATCC
6260]
Length = 516
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/345 (31%), Positives = 168/345 (48%), Gaps = 42/345 (12%)
Query: 101 IKPTGVGAGLE---NLGNTCFINAILQCFTHTLPLV--QALRSFDHPRPCDGATE----- 150
I P +GL+ NLG+TCF++ ILQ F H PLV Q + H CD E
Sbjct: 177 IPPVAAVSGLKGFVNLGSTCFMSCILQTFIHN-PLVKYQFFNNDLHYFNCDSMQEYHSAN 235
Query: 151 ------GFCVICALRDHIELSLASSGKV--LSPRKLVDNLNYISSFFQRYQQEDAHEFLQ 202
C+ C++ D I + +S + L+ Y + ++++DAHE Q
Sbjct: 236 PNVTENNACITCSI-DVIFRNFYTSTSIEGYGMTNLLMTAWYKNKSLAGFEEQDAHELWQ 294
Query: 203 CLLDRLES---CCLDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLID 259
LL+ L S L ++ ES + I F G L S +QC NC ++T +P+ID
Sbjct: 295 FLLNELHSDHERSLQRSSQHESEQNMCQCITHSTFSGTLASSIQCQNCQETTETVDPMID 354
Query: 260 LSLEI------EDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSV 313
LSLEI + +L L+ FT EK+ + +TC C E+ K L + K+ V
Sbjct: 355 LSLEIGRLKNKQKTANLYDCLDRFTSSEKL---DVMYTCHHCGEKSEATKSLKIKKLAPV 411
Query: 314 AAFHLKRFK----TDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMG 369
+ LKRF+ DGS K++ V P+ LD+ YTS + +++ Y L+A+V H+G
Sbjct: 412 LSIQLKRFEHNKSNDGS--SKVETPVSIPIYLDISKYTSDEKATNI---YELFAVVCHVG 466
Query: 370 SSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFY 414
S T GHY ++ W + +DS ++ + E V S + Y+LFY
Sbjct: 467 SVNT-GHYIVVVKDGEGRWLKFDDSVISLIAESEVSSMNGYLLFY 510
>gi|345490133|ref|XP_001599439.2| PREDICTED: hypothetical protein LOC100114408 [Nasonia vitripennis]
Length = 823
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/339 (32%), Positives = 160/339 (47%), Gaps = 36/339 (10%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGF--CVICALRDHIELSL 166
GL N+GNTCF+N+++QC ++T PL++ L + + + T +I A I+
Sbjct: 485 GLRNIGNTCFMNSVIQCLSNTRPLLEYLLNEQYLTDINTTTSSMKGALIKAFSQVIQELW 544
Query: 167 ASSG-KVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLES--------------- 210
+ G V++ L + + F Y Q+DA EFL+ LL+ L
Sbjct: 545 ENDGDHVVNTSSLKSQIQRFAPRFMGYSQQDAQEFLRYLLEGLHEDVNRVTVKPQPIHTD 604
Query: 211 ---CCLDSKTKDES----LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE 263
DS ES L S+ IV VF G L S L+C C S T +P DLSL
Sbjct: 605 IPDSYSDSMKAAESWKRYLRSEDSTIVD-VFVGQLRSSLRCTVCDHVSVTLDPFWDLSLP 663
Query: 264 IEDVGS---LGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKR 320
I L LE FT+ E++ D + K TC KC+ + K + K P + HLKR
Sbjct: 664 IPSRSGTVRLNQCLEHFTR-EEVLDGDEKPTCSKCQMRRKCTKSFAIQKFPKILVIHLKR 722
Query: 321 FKTDGSYVVKIDKHVEFPLE-LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFS 379
F + K+ V+FPL L+L + + Y+LY + H G++ + GHY +
Sbjct: 723 FSPMERFRGKLSVLVDFPLTGLELSAFAAPRVQG---CTYNLYGVANHSGTTHS-GHYTA 778
Query: 380 YIRSS-PDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQ 417
Y + WH NDSRVT V V+S +AY+LFY +Q
Sbjct: 779 YCKHPYSGEWHEYNDSRVTPVSARSVVSSEAYVLFYEQQ 817
>gi|6573165|gb|AAF17575.1| testis ubiquitin specific processing protease [Rattus norvegicus]
gi|149041436|gb|EDL95277.1| ubiquitin specific peptidase 2, isoform CRA_c [Rattus norvegicus]
Length = 396
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 118/338 (34%), Positives = 160/338 (47%), Gaps = 39/338 (11%)
Query: 108 AGLENLGNTCFINAILQCFTHTLPL----VQALRSFDHPRPCDGATEGFCVICALRDHIE 163
AGL NLGNTCF+N+ILQC ++T L +Q L D T L I
Sbjct: 58 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLGHTSSAHTALMEEFAKLIQTIW 117
Query: 164 LSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLES----CCLDSKTKD 219
S S V+SP + + + F Y Q+DA EFL+ LLD L + K
Sbjct: 118 TS--SPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVAARPKPSP 175
Query: 220 ESLS----------------SQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE 263
ESL + D+ + +F G L S L C +CG CS ++P DLSL
Sbjct: 176 ESLDHLPDEEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLP 235
Query: 264 IEDVG----SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLK 319
I G +L + FTK E + D + K TC +C+ + K+ + + P + HLK
Sbjct: 236 IAKRGYPEVTLMDCMRLFTK-EDVLDGDEKPTCCRCRARKRCIKKFSVQRFPKILVLHLK 294
Query: 320 RFKTDGSYVVKIDKHVEFPL-ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYF 378
RF K+ V FPL +LDL+ + S N V Y+LYA+ H G++ GHY
Sbjct: 295 RFSESRIRTSKLTTFVNFPLRDLDLREFASENTNHAV---YNLYAVSNHSGTT-MGGHYT 350
Query: 379 SYIRSSPDT--WHRLNDSRVTRVEEEFVLSQDAYILFY 414
+Y R SP T WH NDS VT + V + DAY+LFY
Sbjct: 351 AYCR-SPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFY 387
>gi|402913054|ref|XP_003919045.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like, partial [Papio anubis]
Length = 285
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 122/220 (55%), Gaps = 10/220 (4%)
Query: 102 KPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDH 161
+P VGAGL+N+GNTC++NA LQC T+T PL + S +H + C C++C + H
Sbjct: 74 RPAAVGAGLQNMGNTCYMNASLQCLTYTPPLANYMLSQEHSQLCH--RHKCCMLCTMEAH 131
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES 221
I +L G V+ P + +++ F R +QEDAHEFL ++D ++ CL K
Sbjct: 132 ITRALHCPGHVIQPSQA------LAAGFHRGKQEDAHEFLMFIVDAMKKACLPGH-KQVD 184
Query: 222 LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLE 281
S+ ++ ++FGGC S+++C +C SDT++P +D++L+I+ S+ ALE K E
Sbjct: 185 HDSEDTTLIHQIFGGCWRSQIKCLHCQGVSDTFDPYLDIALDIQAAQSVKQALEQVVKPE 244
Query: 282 KIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRF 321
++ + E + C C ++ K L V LKRF
Sbjct: 245 EL-NGENAYHCGLCLQKAPASKTFTLHTSAKVLILVLKRF 283
>gi|148238088|ref|NP_001090549.1| ubiquitin thiolesterase 3 [Xenopus laevis]
gi|117558253|gb|AAI26024.1| LOC100036785 protein [Xenopus laevis]
Length = 522
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 119/358 (33%), Positives = 165/358 (46%), Gaps = 51/358 (14%)
Query: 107 GAGLENLGNTCFINAILQ---------CFTHTLPLVQ------ALRSFDHPRPCDGATEG 151
GL NLGNTCF+NAILQ C+ LP V+ A R H R
Sbjct: 160 ATGLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRTYHTR--SQGDVN 217
Query: 152 FCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLE-- 209
++ R + + SP L + I F+ YQQ+DAHEF++ LLD L
Sbjct: 218 VSLVEEFRKTLCALWQGNQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE 277
Query: 210 ---------SCCLDSKTKDESLSSQ-----GDNIVQRVFGGCLISKLQCCNCGSCSDTYE 255
L S+S++ +V VFGG L +++ C CG+ S ++
Sbjct: 278 LQGEFDGSSHSVLSQANCSRSVSNKCCINGASTVVTSVFGGVLQNEVNCLICGTESRKFD 337
Query: 256 PLIDLSLEIED--------------VGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSV 301
P +DLSL+I +L L SFT LE++++ E +TC KCK++
Sbjct: 338 PFLDLSLDIPSQFRNKRCKNQENGPTCTLRDCLRSFTDLEELDETEL-YTCLKCKKKQKS 396
Query: 302 EKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE-LDLKPYTSGGQNSDVE-LKY 359
K+ + K+P V HLKRF K+D +V+FPL LD+K + +N E Y
Sbjct: 397 TKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVDFPLRGLDMKSFLLEPENIGPESCLY 456
Query: 360 HLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQ 417
L A+V H GS GHY +Y + W NDS VT EEE V AYILFY ++
Sbjct: 457 DLEAVVVHHGSGVGSGHYTAYA-THEGRWFHFNDSTVTLTEEETVAKAKAYILFYVER 513
>gi|402913751|ref|XP_003919327.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like, partial [Papio anubis]
Length = 288
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 122/220 (55%), Gaps = 10/220 (4%)
Query: 102 KPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDH 161
+P VGAGL+N+GNTC++NA LQC T+T PL + S +H + C C++C + H
Sbjct: 74 RPAAVGAGLQNMGNTCYMNASLQCLTYTPPLANYMLSQEHSQLCH--RHKCCMLCTMEAH 131
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES 221
I +L G V+ P + +++ F R +QEDAHEFL ++D ++ CL K
Sbjct: 132 ITRALHCPGHVIQPSQA------LAAGFHRGKQEDAHEFLMFIVDAMKKACLPGH-KQVD 184
Query: 222 LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLE 281
S+ ++ ++FGGC S+++C +C SDT++P +D++L+I+ S+ ALE K E
Sbjct: 185 HDSEDTTLIHQIFGGCWRSQIKCLHCQGVSDTFDPYLDIALDIQAAQSVKQALEQVVKPE 244
Query: 282 KIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRF 321
++ + E + C C ++ K L V LKRF
Sbjct: 245 EL-NGENAYHCGLCLQKAPASKTFTLHTSAKVLILVLKRF 283
>gi|193700037|ref|XP_001944500.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like
[Acyrthosiphon pisum]
Length = 565
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/338 (32%), Positives = 164/338 (48%), Gaps = 43/338 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHI-ELSLA 167
G+ N+GNTC++N++LQC ++T L ++ D DG +I RD + + A
Sbjct: 234 GIRNIGNTCYMNSVLQCLSNTKSLTDSV--LDDVDGADGK-----LIRVYRDLLSRIWTA 286
Query: 168 SSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCC------------LDS 215
S + +S F Y+Q+DA EFL+ LLDRL +D
Sbjct: 287 SDSHPVDTTAFKSAFQRLSPRFAGYEQQDAQEFLRLLLDRLHMDVNRVKVKPRAMPDVDE 346
Query: 216 KTKDESLSSQ--------GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDV 267
KD +L+++ ++ V +F G L S L+C +CG S T+E D+SL +
Sbjct: 347 TLKDNALAAEFWQRYLVTDNSTVVDLFAGQLKSTLECSSCGHKSITFEVFWDVSLPLPSS 406
Query: 268 G-----SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK 322
G S+ L +FT+ E++ D + C CK + K ++P HLKRF+
Sbjct: 407 GSTNIVSINDLLHNFTQ-EEVLDFRERPRCSVCKVDRKMFKSYRFQRLPRYLVLHLKRFQ 465
Query: 323 TDGSYVVKIDKHVEFP-LELDLKPYTSGGQNSDV--ELKYHLYAIVEHMGSSPTCGHYFS 379
SY KI V FP + LD+ PY SG S KY+LYA+ H G +P GHY +
Sbjct: 466 GTQSY-KKITSLVAFPSVSLDMSPYVSGTARSIQPHACKYNLYAVSNHTG-TPIAGHYTA 523
Query: 380 YIRSSPDT--WHRLNDSRVTRVEEEF-VLSQDAYILFY 414
+ P T W+ NDS V+R+ ++S +AYILFY
Sbjct: 524 MCK-HPVTGDWNFFNDSSVSRITSSAKLISNEAYILFY 560
>gi|3386550|gb|AAC28392.1| ubiquitin-specific protease UBP41 [Homo sapiens]
Length = 353
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 117/338 (34%), Positives = 162/338 (47%), Gaps = 39/338 (11%)
Query: 108 AGLENLGNTCFINAILQCFTHTLPL----VQALRSFDHPRPCDGATEGFCVICALRDHIE 163
AGL NLGNTCF+N+ILQC ++T L +Q L D + T L I
Sbjct: 15 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALVEEFAKLIQTIW 74
Query: 164 LSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLES----CCLDSKTKD 219
S S V+SP + + + F Y Q+DA EFL+ LLD L + L K+
Sbjct: 75 TS--SPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNP 132
Query: 220 ESLS----------------SQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE 263
E+L + D+ + +F G L S L C +CG CS ++P DLSL
Sbjct: 133 ENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLP 192
Query: 264 IEDVG----SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLK 319
I G +L + FTK E + D + K TC +C+ + K+ + + P + HLK
Sbjct: 193 IAKRGYPEVTLMDCMRLFTK-EDVLDGDEKPTCCRCRGRKRCIKKFSIQRFPKILVLHLK 251
Query: 320 RFKTDGSYVVKIDKHVEFPL-ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYF 378
RF K+ V FPL +LDL+ + S N V Y+LYA+ H G++ GHY
Sbjct: 252 RFSESRIRTSKLTTFVNFPLRDLDLREFASENTNHAV---YNLYAVSNHSGTT-MGGHYT 307
Query: 379 SYIRSSPDT--WHRLNDSRVTRVEEEFVLSQDAYILFY 414
+Y R SP T WH NDS VT + V + DAY+ FY
Sbjct: 308 AYCR-SPGTGEWHTFNDSSVTPMSSSQVRTSDAYLHFY 344
>gi|326469413|gb|EGD93422.1| ubiquitin C-terminal hydrolase Ubp8 [Trichophyton tonsurans CBS
112818]
Length = 486
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/329 (32%), Positives = 153/329 (46%), Gaps = 30/329 (9%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRP-CDGATEGFCVICALRDHI-ELSL 166
GL NLG TC++N ILQ H L H C C CAL D E S
Sbjct: 164 GLFNLGQTCYMNVILQTLFHEPVLTAYFLGNGHSTSECQKVN---CFGCALADAFAEFSN 220
Query: 167 ASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQG 226
+ L+ SS Y Q+DAHEF Q L+++L +S T
Sbjct: 221 EEKDEGFGALNLLLASWQKSSDLAGYHQQDAHEFYQFLVNQLH----ESTTGHLDCDPAC 276
Query: 227 DNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE---------------DVG-SL 270
F G L S + C NCG S T +P++D+SL+++ DV +L
Sbjct: 277 RCFFHTAFFGKLRSTITCRNCGKVSRTEDPVMDVSLDLQVQKKKRALDGGEQSSDVAPTL 336
Query: 271 GSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVK 330
LE + EK+ E + C +C + V KQL L K+P + LKRF+ + S K
Sbjct: 337 QGCLEGYISPEKLAASE--YGCTQCNSNMGVTKQLRLRKLPVILCMQLKRFERNRSVSEK 394
Query: 331 IDKHVEFPLELDLKPYTSGGQNSD-VELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWH 389
++ V +P +++ PYT+ ++ + + +Y L ++V H+G + GHY +Y R + W
Sbjct: 395 VETKVTYPASINMMPYTTSPRSENRSQFQYDLLSVVVHIGDIDS-GHYLAYCRHG-EQWF 452
Query: 390 RLNDSRVTRVEEEFVLSQDAYILFYAKQG 418
+ ND RVT V E VL DAY+LFY Q
Sbjct: 453 KFNDDRVTVVAESEVLGADAYLLFYTLQA 481
>gi|440295045|gb|ELP87974.1| hypothetical protein EIN_418530 [Entamoeba invadens IP1]
Length = 600
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 100/323 (30%), Positives = 147/323 (45%), Gaps = 49/323 (15%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
VG G N + C++ ++LQ THT PL + VI +L D +
Sbjct: 68 VGKGYFNAHSNCYMISVLQALTHTTPLYNYIAQSK-------------VIPSLEDPFWTA 114
Query: 166 LAS------SGK---VLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSK 216
LAS GK +L P NL +S +RY+QEDA EF LLD L +
Sbjct: 115 LASLFSKAFVGKQNTILKPIAFEKNLKILSKSLERYEQEDATEFYVLLLDHLHEAAI--- 171
Query: 217 TKDESLSSQGDN---IVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSA 273
+G N I+ +F L S++ C NC SD+ E L +E+ +L S
Sbjct: 172 -------GKGKNKISIISSIFHTTLTSRITCYNCLGISDSNEQFSFLPVEVTKDKTLESG 224
Query: 274 LESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDK 333
L+ F K +D +TC+KCK K+ + ++P V A +KRF D KI+
Sbjct: 225 LDVFFK----KDVLDGYTCDKCKTSSKASKRYFVKELPWVLAIQIKRFGWDER---KING 277
Query: 334 HVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLND 393
V+FP EL++ Y G + LY ++ H+G + GHY YI+ W + +D
Sbjct: 278 FVKFPSELNMSKYGKDGL-------FDLYGVIVHLGRTKHGGHYICYIKGPNSGWFQCDD 330
Query: 394 SRVTRVEEEFVLSQDAYILFYAK 416
VT V + VL + Y+LFY +
Sbjct: 331 DTVTSVPIKTVLKSEGYMLFYKR 353
>gi|297302780|ref|XP_001119441.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like, partial [Macaca mulatta]
Length = 293
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 123/220 (55%), Gaps = 10/220 (4%)
Query: 102 KPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDH 161
+P VGAGL+N+GNTC++NA LQC T+T PL + S +H + C C++C + H
Sbjct: 74 RPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQLCH--HHKCCMLCTMEAH 131
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES 221
I +L G V+ P + + + F R +QEDAHEFL ++D ++ CL + +
Sbjct: 132 ITRALHRPGHVIQPSQ------ALVAGFHRGKQEDAHEFLMFIVDAMKRACLPGHRQVDH 185
Query: 222 LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLE 281
S+ ++ ++FGGC S+++C +C SDT++P +D++L+I+ S+ ALE K E
Sbjct: 186 -DSEDTTLIHQIFGGCWRSQIKCLHCQGVSDTFDPYLDIALDIQAAQSVKQALEQVVKPE 244
Query: 282 KIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRF 321
++ + E + C C ++ K+ L V LKRF
Sbjct: 245 EL-NGENAYHCGLCLQKAPASKKFTLHTSAKVLILVLKRF 283
>gi|326483083|gb|EGE07093.1| ubiquitin carboxyl-terminal hydrolase [Trichophyton equinum CBS
127.97]
Length = 486
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/329 (32%), Positives = 153/329 (46%), Gaps = 30/329 (9%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRP-CDGATEGFCVICALRDHI-ELSL 166
GL NLG TC++N ILQ H L H C C CAL D E S
Sbjct: 164 GLFNLGQTCYMNVILQTLFHEPVLTAYFLGNGHSTSECQKVN---CFGCALADAFAEFSN 220
Query: 167 ASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQG 226
+ L+ SS Y Q+DAHEF Q L+++L +S T
Sbjct: 221 EEKDEGFGALNLLLASWQKSSDLAGYHQQDAHEFYQFLVNQLH----ESTTGHLDCDPAC 276
Query: 227 DNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE---------------DVG-SL 270
F G L S + C NCG S T +P++D+SL+++ DV +L
Sbjct: 277 RCFFHTAFFGKLRSTITCRNCGKVSRTEDPVMDVSLDLQVQKKKRALDGGEQSSDVAPTL 336
Query: 271 GSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVK 330
LE + EK+ E + C +C + V KQL L K+P + LKRF+ + S K
Sbjct: 337 QGCLEGYISPEKLAASE--YGCTQCNSNMGVTKQLRLRKLPVILCMQLKRFERNRSVSEK 394
Query: 331 IDKHVEFPLELDLKPYTSGGQNSD-VELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWH 389
++ V +P +++ PYT+ ++ + + +Y L ++V H+G + GHY +Y R + W
Sbjct: 395 VETKVTYPASINMMPYTTSPRSENRSQFQYDLLSVVVHIGDIDS-GHYLAYCRHG-EQWF 452
Query: 390 RLNDSRVTRVEEEFVLSQDAYILFYAKQG 418
+ ND RVT V E VL DAY+LFY Q
Sbjct: 453 KFNDDRVTVVAESEVLGADAYLLFYTLQA 481
>gi|21450103|ref|NP_659186.1| ubiquitin carboxyl-terminal hydrolase 3 [Mus musculus]
gi|30580632|sp|Q91W36.1|UBP3_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 3; AltName:
Full=Deubiquitinating enzyme 3; AltName: Full=Ubiquitin
thioesterase 3; AltName:
Full=Ubiquitin-specific-processing protease 3
gi|16877850|gb|AAH17156.1| Ubiquitin specific peptidase 3 [Mus musculus]
gi|26327065|dbj|BAC27276.1| unnamed protein product [Mus musculus]
gi|148694176|gb|EDL26123.1| ubiquitin specific peptidase 3 [Mus musculus]
Length = 520
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 121/365 (33%), Positives = 166/365 (45%), Gaps = 55/365 (15%)
Query: 107 GAGLENLGNTCFINAILQ---------CFTHTLPLVQ------ALRSFDHPRPCDGATEG 151
GL NLGNTCF+NAILQ C+ LP V+ A R H R
Sbjct: 158 ATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTR--SQGDSN 215
Query: 152 FCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLE-- 209
++ R + S SP L + I F+ YQQ+DAHEF++ LLD L
Sbjct: 216 VSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE 275
Query: 210 ----------SCCLDSKT----KDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYE 255
S L + ++ + +V +FGG L +++ C CG+ S ++
Sbjct: 276 LQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFD 335
Query: 256 PLIDLSLEIED--------------VGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSV 301
P +DLSL+I V SL L SFT LE++++ E + C KCK++
Sbjct: 336 PFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETEL-YMCHKCKKKQKS 394
Query: 302 EKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE-LDLKPYTSGGQNSDVE-LKY 359
K+ + K+P HLKRF K+D +V+FPL LD+K Y +NS + Y
Sbjct: 395 TKKFWIQKLPKALCLHLKRFHWTAYLRNKVDTYVQFPLRGLDMKCYLLEPENSGPDSCLY 454
Query: 360 HLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFY----A 415
L A+V H GS GHY +Y W NDS VT +EE V AYILFY A
Sbjct: 455 DLAAVVVHHGSGVGSGHYTAYA-VHEGRWFHFNDSTVTVTDEETVGKAKAYILFYVERQA 513
Query: 416 KQGTE 420
+ G E
Sbjct: 514 RAGAE 518
>gi|426358888|ref|XP_004046721.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Gorilla
gorilla gorilla]
Length = 301
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/234 (33%), Positives = 125/234 (53%), Gaps = 11/234 (4%)
Query: 102 KPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDH 161
+P VGAGL+N+GNTC++NA LQC T+T PL + S +H + C C++C ++ H
Sbjct: 74 RPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCH--RHKGCMLCTMQAH 131
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES 221
I +L G V+ P + +++ F R +QEDAHEFL +D ++ CL K
Sbjct: 132 ITRALYRPGHVIQPSQA------LAAGFHRGKQEDAHEFLMFTVDAMKKACLPGH-KQVD 184
Query: 222 LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLE 281
S ++ ++FGG S+++C +C SDT++P +D++L+I+ S+ ALE K E
Sbjct: 185 HHSNDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVKQALEQLVKPE 244
Query: 282 KIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHV 335
++ + E + C C + K L L V LKRF +D + KH
Sbjct: 245 EL-NGENAYQCALCLHKAPASKTLTLHTSAKVLILVLKRF-SDVTXXXXTHKHT 296
>gi|396483031|ref|XP_003841613.1| similar to ubiquitin carboxyl-terminal hydrolase 22 [Leptosphaeria
maculans JN3]
gi|312218188|emb|CBX98134.1| similar to ubiquitin carboxyl-terminal hydrolase 22 [Leptosphaeria
maculans JN3]
Length = 517
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 111/348 (31%), Positives = 160/348 (45%), Gaps = 47/348 (13%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRD-HIELSLA 167
GL N+G TCF++ ILQ H P ++ + R D E CV CAL + +E A
Sbjct: 180 GLYNMGQTCFMSVILQTLVHN-PFIRNFYLSEGHRQADCEKEA-CVSCALDEMFVEFHSA 237
Query: 168 SSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGD 227
+ L+ YQQ+DAHE++Q +L+ L + T D S
Sbjct: 238 EKTEGFGAVGLLMGSWLAGEALAGYQQQDAHEYMQFILNTLH--LANGGTTD---SEDCK 292
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVG-----SLGSA--------- 273
+V + F G L S + C NC + + +P +DLSL++ + S G+
Sbjct: 293 CVVHQTFCGKLSSTVTCDNCRNVTTALDPYMDLSLDVRNQAKKKKLSAGTGDETPLDIRD 352
Query: 274 -LESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKID 332
LE FT E++ E +TC C + KQL + ++P V + HLKRF+ S KI+
Sbjct: 353 CLERFTVKERLGAAE--YTCRTCDSPQNATKQLSIKRLPPVLSIHLKRFEHAKSTSSKIE 410
Query: 333 KHVEFPLELDLKPYTSG-------------------GQNSDVE-LKYHLYAIVEHMGSSP 372
V FP++LD+ PYT+ NS L Y L ++V H G
Sbjct: 411 TKVTFPVKLDVHPYTTAHKAAVKALASKSASLDSNHNMNSPANSLVYELSSVVVHKGKMD 470
Query: 373 TCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTE 420
+ GHY SY R D W +DS+V V E VL+ +AY+LFY G E
Sbjct: 471 S-GHYVSYSREGND-WFMFDDSKVVLVGEAEVLAAEAYLLFYMVSGLE 516
>gi|213510860|ref|NP_001133405.1| ubiquitin carboxyl-terminal hydrolase 12 [Salmo salar]
gi|209153653|gb|ACI33173.1| Ubiquitin carboxyl-terminal hydrolase 12 [Salmo salar]
Length = 372
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 169/357 (47%), Gaps = 55/357 (15%)
Query: 92 PVEKHWPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSF-DHPRPCDGATE 150
PV +H+ GL N GNTC+ N++LQ P + + ++ PR +
Sbjct: 33 PVNEHY----------FGLVNFGNTCYCNSVLQALYFCRPFREKILAYRSQPRRKEN--- 79
Query: 151 GFCVICALRDHIELSLASSGK---VLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDR 207
++ L D S+A+ + V+ P+K + L + F Y Q+DAHEFL LL+
Sbjct: 80 ---LLTCLADLFH-SIANQKRKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNT 135
Query: 208 LESCCLDSKTKDE--------SLSSQGDN--------IVQRVFGGCLISKLQCCNCGSCS 251
+ + + +D+ SL SQ +N V +F G L ++ +C C + S
Sbjct: 136 IADLLQEERKQDKTNGRLANGSLDSQNNNSNAPPPSTWVHEIFQGTLTNETRCLTCETIS 195
Query: 252 DTYEPLIDLSLEIEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVP 311
E +DLS+++E S+ L F+ E + E K+ CE+C+ + K++ + K+P
Sbjct: 196 SKDEDFLDLSVDVEQNTSITHCLRGFSNTETL-CSEYKYYCEECRSKQEAHKRMRVKKLP 254
Query: 312 SVAAFHLKRFKT--DGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMG 369
+ A HLKRFK K+ V FPLEL L + + G ++ E Y L A+V H G
Sbjct: 255 MILALHLKRFKYMEQLQRYTKLSYRVVFPLELRL--FNTSGDATNPERLYDLVAVVVHCG 312
Query: 370 SSPTCGHYFSYIRSSPDTWHRLNDSRVTRVE----EEFVL--------SQDAYILFY 414
S P GHY + ++S D W +D V +++ EEF S+ YILFY
Sbjct: 313 SGPNRGHYIAIVKSH-DFWLLFDDDIVEKIDAQAIEEFYGLTSEISKNSESGYILFY 368
>gi|327289850|ref|XP_003229637.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Anolis
carolinensis]
Length = 479
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 105/342 (30%), Positives = 165/342 (48%), Gaps = 49/342 (14%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFD-HPRPCDGATEGFCVICALRDHIELSLA 167
GL N GNTC+ N++LQ P + + ++ PR + ++ L D S+A
Sbjct: 147 GLVNFGNTCYCNSVLQALYFCRPFREKVLAYKVQPRKKES------LLTCLSDLFN-SIA 199
Query: 168 SSGK---VLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLD-----------------R 207
+ K V+ P+K + L + F Y Q+DAHEFL LL+ +
Sbjct: 200 TQKKKVGVIPPKKFISRLRKENELFDNYMQQDAHEFLNYLLNTIADLLQEEKKQEKQNGK 259
Query: 208 LESCCLDSKTKDESLSSQGD-NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIED 266
L++ L+S DE +GD V +F G L ++ +C NC + S E +DLS+++E
Sbjct: 260 LQNGSLESSGGDEG--EKGDLTWVHEIFQGTLTNETRCLNCEAVSSKDEDFLDLSVDVEQ 317
Query: 267 VGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGS 326
S+ L F+ E + E K+ CE+C+ + +K++ + K+P + A HLKRFK
Sbjct: 318 NTSITHCLRGFSNTETLCS-EYKYYCEQCRSKQEAQKRMRVKKLPMILALHLKRFKYMDQ 376
Query: 327 Y--VVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSS 384
K+ V FPLEL L + + G ++ + Y L A+V H GS P GHY + ++S
Sbjct: 377 LHRYTKLSYRVVFPLELRL--FNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYITIVKSH 434
Query: 385 PDTWHRLNDSRVTR-----VEEEFVLSQD-------AYILFY 414
W +D V + +EE + L+ D YILFY
Sbjct: 435 -GFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYILFY 475
>gi|326527689|dbj|BAK08119.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 366
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 107/345 (31%), Positives = 162/345 (46%), Gaps = 48/345 (13%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSF--DHPRPCDGATEGFCVICALRDHIELSL 166
GLEN GNTC+ N++LQ +P + L + ++ DG + L I
Sbjct: 24 GLENFGNTCYCNSVLQALYFCVPFREQLLEYYANNKSASDGEENMLTCLADLFSQISNQK 83
Query: 167 ASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLL----DRLESCCLDSK------ 216
+G V++P++ + L + F+ Y +DAHEFL LL D LE C +K
Sbjct: 84 KKTG-VIAPKRFIQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILEKECKANKEPSQNS 142
Query: 217 ------------TKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEI 264
+ S V + F G L ++ +C C + +D E +DLSL+I
Sbjct: 143 SSNKNSNGPVNGQPNGSHKEPDTTWVHKCFQGILTNQTKCLRCETVTDRDETFLDLSLDI 202
Query: 265 EDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTD 324
E S+ S L++F+ E + + E KF C+KC +K++ + K P++ HLKRFK
Sbjct: 203 EQNSSITSCLKNFSSTETL-NAEDKFFCDKCCSLQEAQKRMKIKKQPNILVIHLKRFKYI 261
Query: 325 ---GSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYI 381
G Y K+ V FPLEL L + NSD+E Y L+A++ H+GS P GHY S +
Sbjct: 262 EQLGRY-KKLTYRVVFPLELKL---MNTVDNSDLE--YSLFAVLVHVGSGPNHGHYISVV 315
Query: 382 RSSPDTWHRLNDSRVTRVEEEFVL------------SQDAYILFY 414
+S + W +D V +E V + + YILFY
Sbjct: 316 KSH-NHWLFFDDETVEMTDESMVQTFFGSAQEFSGNTDNGYILFY 359
>gi|443715045|gb|ELU07196.1| hypothetical protein CAPTEDRAFT_18184 [Capitella teleta]
Length = 533
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 112/373 (30%), Positives = 157/373 (42%), Gaps = 68/373 (18%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGF-CVICALRDHIELSLA 167
GL NLGNTCF+N I+Q THT L S H C E C++C + + +
Sbjct: 160 GLINLGNTCFMNCIVQALTHTPLLRDYFLSDQHK--CQMTQESQQCLVCEMSRLFQEFYS 217
Query: 168 SSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTK---DESLSS 224
+P +L+ + + Y+Q+DAHEFL LD + C S+ K D + +
Sbjct: 218 GVRTPHTPYRLLHLVWTHARHLAGYEQQDAHEFLIAALDVIHQHCKASRNKEDADGNTAQ 277
Query: 225 QGDNIVQRVFGGCLISKLQCCNCG------------------------------------ 248
D I+ R+F G L S + C C
Sbjct: 278 VCDCIIDRIFTGGLQSDVTCQECNILYTFRLEMSPRLSTPSGISPWISAPRKTTLHLVSW 337
Query: 249 --SCSDTYEPLIDLSL-----EIEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSV 301
C+ LI E+ SL L FT+ E + K C KC
Sbjct: 338 SDPCATDSHTLISAVFSNGLDRFEEATSLTYCLRRFTRPEHL-GSTAKIKCSKCHNYQES 396
Query: 302 EKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPYTSGGQNSD------- 354
KQL + K+P VA FHLKRF+ Y KI +V FP ELD+ P+ S ++++
Sbjct: 397 TKQLTMKKLPLVACFHLKRFEHSTGYHKKISTYVSFPEELDMTPFMSASRDNNNGYSHQV 456
Query: 355 ---------VELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF-V 404
E KY LYA+V H G++ T GHY +IR W R D +T+ ++ V
Sbjct: 457 IQEAASGLTSENKYSLYAVVNHRGTADT-GHYTCFIRQHKSHWFRCEDHLITKASLDYEV 515
Query: 405 LSQDAYILFYAKQ 417
L + Y+LFY KQ
Sbjct: 516 LKSEGYLLFYHKQ 528
>gi|345799830|ref|XP_003434615.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Canis lupus
familiaris]
Length = 395
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 117/338 (34%), Positives = 163/338 (48%), Gaps = 39/338 (11%)
Query: 108 AGLENLGNTCFINAILQCFTHTLPL----VQALRSFDHPRPCDGATEGFCVICALRDHIE 163
AGL NLGNTCF+N+ILQC ++T L +Q L D + T L I
Sbjct: 57 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHSSNVHTALMEEFAKLIQTIW 116
Query: 164 LSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLES----CCLDSKTKD 219
S S V+SP + + + F Y Q+DA EFL+ LLD L + + K+
Sbjct: 117 TS--SPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTVRPKSNP 174
Query: 220 ESLS----------------SQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE 263
E+L + D+ + +F G L S L C +CG CS ++P DLSL
Sbjct: 175 ENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLP 234
Query: 264 IEDVG----SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLK 319
I G +L + FTK E + D + K TC +C+ + K+ + + P + HLK
Sbjct: 235 IAKRGYPEVTLTDCMRLFTK-EDVLDGDEKPTCCRCRARKRCIKKFSIQRFPKILVLHLK 293
Query: 320 RFKTDGSYVVKIDKHVEFPL-ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYF 378
RF K+ V FPL +LDL+ + S N V Y+LYA+ H G++ GHY
Sbjct: 294 RFSESRIRTSKLTTFVNFPLRDLDLREFASENTNHAV---YNLYAVSNHSGTT-MGGHYT 349
Query: 379 SYIRSSPDT--WHRLNDSRVTRVEEEFVLSQDAYILFY 414
+Y R SP T WH NDS VT + V + DAY+LFY
Sbjct: 350 AYCR-SPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFY 386
>gi|5410230|gb|AAD42992.1|AF073344_1 ubiquitin-specific protease 3 [Homo sapiens]
Length = 521
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 123/378 (32%), Positives = 168/378 (44%), Gaps = 80/378 (21%)
Query: 107 GAGLENLGNTCFINAILQ---------CFTHTLPLVQ------ALRSFDHPRPCDGATEG 151
GL NLGNTCF+NAILQ C+ LP V+ A R H R
Sbjct: 158 ATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTR--SQGDNN 215
Query: 152 FCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEF----------- 200
++ R + S SP L + I F+ YQQ+DAHEF
Sbjct: 216 VSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFNALPFGPPTLG 275
Query: 201 ------------------LQCLLDRLESCCLDSKTKDESLSSQGDNIVQRVFGGCLISKL 242
L CL ++ CC++ + +V +FGG L +++
Sbjct: 276 NFRAVSTVFPAQQFCRRILLCL--QVNKCCINGAS----------TVVTAIFGGILQNEV 323
Query: 243 QCCNCGSCSDTYEPLIDLSLEIED--------------VGSLGSALESFTKLEKIEDPET 288
C CG+ S ++P +DLSL+I V SL L SFT LE++++ E
Sbjct: 324 NCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETEL 383
Query: 289 KFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE-LDLKPYT 347
+ C KCK++ K+ + K+P V HLKRF K+D +VEFPL LD+K Y
Sbjct: 384 -YMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKWYL 442
Query: 348 SGGQNSDVE-LKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLS 406
+NS E Y L A+V H GS GHY +Y + W NDS VT +EE V+
Sbjct: 443 LEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYA-THEGRWFHFNDSTVTLTDEETVVK 501
Query: 407 QDAYILFY----AKQGTE 420
AYILFY AK G++
Sbjct: 502 AKAYILFYVEHQAKAGSD 519
>gi|356540277|ref|XP_003538616.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like [Glycine
max]
Length = 369
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 114/351 (32%), Positives = 166/351 (47%), Gaps = 49/351 (13%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLV-QALRSFDHPRPCDGATEGFCVICA-LRDHIELSL 166
GLEN GNTC+ N++LQ +P Q L + + + A E A L I
Sbjct: 24 GLENFGNTCYCNSVLQALYFCVPFREQLLEYYANNKSIADAEENLLTCLADLFSQISSQK 83
Query: 167 ASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLL----DRLESCCLDSKTKDESL 222
+G V++P++ V L + F+ Y +DAHEFL LL D LE +K E+
Sbjct: 84 KKTG-VIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILEKEAQSAKNDQETS 142
Query: 223 --SSQGDN-----------------IVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE 263
S + N V + F G L ++ +C C + + E DLSL+
Sbjct: 143 PPSEKAANGPKNGLANGAKKEPLVTWVHKNFQGILTNETRCLRCETVTARDETFFDLSLD 202
Query: 264 IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKT 323
IE S+ S L++F+ E + + E KF C+KC +K++ + K P + HLKRFK
Sbjct: 203 IEQNSSITSCLKNFSSTETL-NAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKY 261
Query: 324 D---GSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSY 380
G Y K+ V FPLEL L + +NSD+E Y L+A+V H+GS P GHY S
Sbjct: 262 IEQLGRY-KKLSYRVVFPLELKL---SDTAENSDIE--YSLFAVVVHVGSGPNHGHYVSL 315
Query: 381 IRSSPDTWHRLNDSRVTRVEEE-----FVLSQD-------AYILFYAKQGT 419
++S + W +D V ++E F SQ+ YILFY G+
Sbjct: 316 VKSH-NHWLFFDDENVEMIDESAVQTFFGSSQEYSSNTDHGYILFYESIGS 365
>gi|336371142|gb|EGN99482.1| hypothetical protein SERLA73DRAFT_168890 [Serpula lacrymans var.
lacrymans S7.3]
Length = 531
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 107/362 (29%), Positives = 163/362 (45%), Gaps = 38/362 (10%)
Query: 101 IKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDH-PRPCDGATEGFCVICALR 159
I P GL NLG TCF+N ILQ F H L S H + C A C+ C +
Sbjct: 154 ILPCQGRRGLLNLGQTCFLNVILQSFIHNPLLRNYFLSDRHNSKLCKHA---HCICCEMD 210
Query: 160 DHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKD 219
+ + P + +SS Y Q+DAHEF L + C S
Sbjct: 211 KLFTEIYSPTSTPFGPTSFLATTWKVSSEMSGYAQQDAHEFFITALALIHGTCRGST--- 267
Query: 220 ESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGS------LGSA 273
+ + I+ F G L S + C CG+ + T +P++D+SLE++ S L
Sbjct: 268 ---NVSCNCIIHSTFAGALQSDVTCERCGNITSTVDPMLDISLELKSKTSEAGDNTLAGC 324
Query: 274 LESFTKLEKIEDPETKFTCEKC-KEQVSVEKQLMLDKVPSVAAFHLKRFK----TDGSYV 328
L FT+ EK+ E ++C KC K K+L + K+P V +F KRF+ + S
Sbjct: 325 LRRFTQPEKLGSKE--YSCSKCSKASHEANKRLSVRKLPPVLSFQFKRFEHKNMSKFSSP 382
Query: 329 VKIDKHVEFPLELDLKPYTSGGQNS-------------DVELKYHLYAIVEHMGSSPTCG 375
KID + FP+ L++ PYT+ N+ D +Y L+A++ H G G
Sbjct: 383 QKIDTPIRFPVMLNMAPYTTLVMNAKGKESEKGHDLGPDAMYEYDLFAVINHEGQMDN-G 441
Query: 376 HYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEWVSSLLEAESIGMNA 435
HY ++ R D W+R +D +VT+ LS AY+ FY K+ ++ + + + +
Sbjct: 442 HYTNFARFQ-DEWYRFDDDKVTQSSLGACLSSPAYMCFYVKRHLDYKPYMKPSYRLTRES 500
Query: 436 DI 437
DI
Sbjct: 501 DI 502
>gi|348545019|ref|XP_003459978.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like
[Oreochromis niloticus]
Length = 394
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 115/344 (33%), Positives = 171/344 (49%), Gaps = 52/344 (15%)
Query: 108 AGLENLGNTCFINAILQCFTHTLPLVQALRSF-----------DHPRPCDGATEGFCVIC 156
GL+NLGNTCF+N+ILQC ++T Q+LR + ++ R E F +
Sbjct: 58 VGLKNLGNTCFMNSILQCLSNT----QSLRDYCLHNSHRRDLNNNSRTNTALMEEFAKLI 113
Query: 157 ALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCC---- 212
+ +SS + +SP + + + F Y Q+DA EFL+ LLD L +
Sbjct: 114 Q-----TMWTSSSSEAVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVT 168
Query: 213 ------------LDSKTKDESLSSQ----GDNIVQRVFGGCLISKLQCCNCGSCSDTYEP 256
L + K + + S+ D+ + +F G L S L C +CG CS ++P
Sbjct: 169 VRPRGTVEDFDHLPDEEKGKKMWSKYLEREDSKIVDLFVGQLKSSLTCSHCGFCSTVFDP 228
Query: 257 LIDLSLEIEDVG----SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPS 312
DLSL I G SL + FTK E + D + K TC +CK + K+ + K P
Sbjct: 229 FWDLSLPIAKKGYGEVSLMDCMRLFTK-EDVLDGDEKPTCYRCKARRRCTKKFTIQKFPK 287
Query: 313 VAAFHLKRFKTDGSYVVKIDKHVEFPL-ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSS 371
+ HLKRF ++ K+ V FP+ +LDL+ + S +NS + Y+LYA+ H G++
Sbjct: 288 ILVLHLKRF-SEARRTSKLSTFVNFPMKDLDLREFAS--ENS-INAVYNLYAVSNHSGTT 343
Query: 372 PTCGHYFSYIRS-SPDTWHRLNDSRVTRVEEEFVLSQDAYILFY 414
GHY +Y R+ S W+ NDSRVT + V S DAY+LFY
Sbjct: 344 -MGGHYTAYCRNPSSGEWYTFNDSRVTPMSSSQVRSSDAYVLFY 386
>gi|351698262|gb|EHB01181.1| Ubiquitin carboxyl-terminal hydrolase 3 [Heterocephalus glaber]
Length = 537
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 121/360 (33%), Positives = 163/360 (45%), Gaps = 76/360 (21%)
Query: 107 GAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSL 166
GL NLGNTCF+NAILQ LV+ R +CAL
Sbjct: 206 ATGLRNLGNTCFMNAILQSLR---SLVEEFRK---------------TLCAL-------W 240
Query: 167 ASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLE------------SCCLD 214
S SP L + I F+ YQQ+DAHEF++ LLD L S L
Sbjct: 241 QGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAMLQ 300
Query: 215 SKTKDESLSSQ-------GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEI--- 264
++ SLS+ +V +FGG L +++ C CG+ S ++P +DLSL+I
Sbjct: 301 ---ENSSLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQ 357
Query: 265 ------------------EDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLM 306
+ + L SFT LE++++ E + C KCK++ K+
Sbjct: 358 FRSKRSKNQENGPVCSLRAQITLVSDCLRSFTDLEELDETEL-YMCHKCKKKQKSTKKFW 416
Query: 307 LDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE-LDLKPYTSGGQNSDVE-LKYHLYAI 364
+ K+P V HLKRF K+D +VEFPL LD+K Y +NS E Y L A+
Sbjct: 417 IQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAV 476
Query: 365 VEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFY----AKQGTE 420
V H GS GHY +Y W NDS VT +EE V AYILFY AK G++
Sbjct: 477 VVHHGSGVGSGHYTAYA-VHEGRWFHFNDSTVTLTDEETVGKAKAYILFYVEHQAKAGSD 535
>gi|351705889|gb|EHB08808.1| Ubiquitin carboxyl-terminal hydrolase 2 [Heterocephalus glaber]
Length = 612
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 115/338 (34%), Positives = 162/338 (47%), Gaps = 39/338 (11%)
Query: 108 AGLENLGNTCFINAILQCFTHTLPL----VQALRSFDHPRPCDGATEGFCVICALRDHIE 163
AGL NLGNTCF+N+ILQC ++T L +Q L D T L I
Sbjct: 274 AGLRNLGNTCFMNSILQCLSNTRELKDYCLQRLYMQDLSHTSSTHTALMEEFAKLIQTIW 333
Query: 164 LSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLES----CCLDSKTKD 219
S + V+SP + + + F Y Q+DA EFL+ LLD L + + K+
Sbjct: 334 TSCPN--DVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTVRPKSNP 391
Query: 220 ESLS----------------SQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE 263
E+L+ + D+ + +F G L S L C +CG CS ++P DLSL
Sbjct: 392 ENLNHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLP 451
Query: 264 IEDVG----SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLK 319
I +L + FTK E + D + K TC C+ + K+ + + P++ HLK
Sbjct: 452 IAKRSYPEVTLMDCMRLFTK-EDVLDGDEKPTCCCCRARKRCIKKFSIQRFPTILVLHLK 510
Query: 320 RFKTDGSYVVKIDKHVEFPL-ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYF 378
RF K+ V FPL +LDL+ + S N V Y+LYA+ H G++ GHY
Sbjct: 511 RFSESRIRTSKLTTFVNFPLRDLDLREFASENTNHAV---YNLYAVSNHSGTT-MGGHYT 566
Query: 379 SYIRSSPDT--WHRLNDSRVTRVEEEFVLSQDAYILFY 414
+Y R SP T WH NDS VT + V + DAY+LFY
Sbjct: 567 AYCR-SPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFY 603
>gi|195446147|ref|XP_002070649.1| GK12180 [Drosophila willistoni]
gi|194166734|gb|EDW81635.1| GK12180 [Drosophila willistoni]
Length = 925
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 110/378 (29%), Positives = 183/378 (48%), Gaps = 71/378 (18%)
Query: 85 GSSLLSRPVEKHWPI--QIKPT---GVG---AGLENLGNTCFINAILQCFTHTLPLVQAL 136
S+ + +PVEK P+ P VG GL+NLGNTC++N+ILQC +HT L +
Sbjct: 560 SSTQIVKPVEKSQPLVRDFSPVIGHNVGRGLTGLKNLGNTCYMNSILQCLSHTPQLTE-- 617
Query: 137 RSFDHPRPCDGATEGFCVICALRDHIELSLASSGKVL------------------SPRKL 178
+C+ +++I S ++G+V+ + R L
Sbjct: 618 ---------------YCITDKYKNYISRSNKTNGQVIEEVAALIKELWNGQYKCVASRDL 662
Query: 179 VDNLNYISSFFQRYQQEDAHEFLQCLLDRLES--CCLDSKTKDESLSSQ----------G 226
+ F+ Q+D+HEFL L+D L S L+ K K E++++
Sbjct: 663 RYVVGQYQKIFRGVDQQDSHEFLTILMDWLHSDLQTLNVKQKRETITASEKAWMEFTKAK 722
Query: 227 DNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEI---EDVGSLGSALESFTKLEKI 283
++++ +F G + S ++C C S TYE +LSLE+ +++ L ++ + E+I
Sbjct: 723 ESLILHLFYGQMKSTVKCVTCNRESATYECFSNLSLELPENKELCYLNQCMDMYFSGERI 782
Query: 284 EDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTD----GSYVVKIDKHVEFPL 339
+ C CK + K+L + K+P V HLKRF D G+Y K ++ FPL
Sbjct: 783 HG----WNCPNCKTKREAIKKLDISKLPPVLVVHLKRFHADPIQSGAYTKK-QNYLRFPL 837
Query: 340 E-LDLKPYTSGGQNSDVELK-YHLYAIVEHMGSSPTCGHYFSYIRSSP-DTWHRLNDSRV 396
E L++ PY + ++ V K Y LYA+ H G+ GHY ++ +S+ W++ +D V
Sbjct: 838 ENLEMTPYIARAESRTVTPKIYQLYAVSNHYGTM-EGGHYTAFCKSANYKRWYKFDDQIV 896
Query: 397 TRVEEEFVLSQDAYILFY 414
+ ++ V+S AYILFY
Sbjct: 897 STLDTSSVVSSAAYILFY 914
>gi|323307659|gb|EGA60924.1| Ubp8p [Saccharomyces cerevisiae FostersO]
Length = 471
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 113/335 (33%), Positives = 170/335 (50%), Gaps = 32/335 (9%)
Query: 108 AGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSL- 166
+GL +G+TCF+++ILQC H ++ S H C + C CAL D I L
Sbjct: 137 SGLIXMGSTCFMSSILQCLIHNPYFIRHSMSQIHSNNCKVRSPDKCFSCAL-DKIVHELY 195
Query: 167 -------ASSGKVLSPRK-----LVDNLNYISSFFQRYQQEDAHEFLQCLLDRL-ESCCL 213
ASS + R+ L+ I+ Y Q+DAHEF Q +++++ +S L
Sbjct: 196 GALNTKQASSSSTSTNRQTGFIYLLTCAWKINQNLAGYSQQDAHEFWQFIINQIHQSYVL 255
Query: 214 D---SKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDT-YEPLIDLSLEIEDVGS 269
D +K + + Q + IV VF G L S + C C + S T +P +DLSL+I+D
Sbjct: 256 DLPNAKEVSRANNKQCECIVHTVFEGSLESSIVCPGCQNNSKTTIDPFLDLSLDIKDKKK 315
Query: 270 LGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK--TDGSY 327
L L+SF K E+++D + C +C KQL + K+PSV LKRF+ +GS
Sbjct: 316 LYECLDSFHKKEQLKD--FNYHCGECNSTQDAIKQLGIHKLPSVLVLQLKRFEHLLNGSN 373
Query: 328 VVKIDKHVEFPLELDLKPYTSG------GQNSDV-ELKYHLYAIVEHMGSSPTCGHYFSY 380
K+D +EFP L++K Y S +N V ++ Y L IV H G+ GHY ++
Sbjct: 374 R-KLDDFIEFPTYLNMKNYCSTKEKDKHSENGKVPDIIYELIGIVSHKGTVNE-GHYIAF 431
Query: 381 IRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYA 415
+ S W + NDS V+ + + VL + AY+LFY
Sbjct: 432 CKISGGQWFKFNDSMVSSISQAEVLKEQAYLLFYT 466
>gi|134133230|ref|NP_001077025.1| ubiquitin carboxyl-terminal hydrolase 12A [Danio rerio]
gi|251765092|sp|A4FUN7.1|UBP12_DANRE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 12A; AltName:
Full=Deubiquitinating enzyme 12A; AltName:
Full=Ubiquitin thioesterase 12A; AltName:
Full=Ubiquitin-specific-processing protease 12A
gi|133778337|gb|AAI15287.1| Usp12 protein [Danio rerio]
Length = 371
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 106/356 (29%), Positives = 169/356 (47%), Gaps = 54/356 (15%)
Query: 92 PVEKHWPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSF-DHPRPCDGATE 150
PV +H+ GL N GNTC+ N++LQ P + + ++ PR +
Sbjct: 33 PVNEHY----------FGLVNFGNTCYCNSVLQALYFCRPFREKILAYRSQPRRKEN--- 79
Query: 151 GFCVICALRDHIELSLASSGK---VLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDR 207
++ L D S+A+ + V+ P+K + L + F Y Q+DAHEFL LL+
Sbjct: 80 ---LLTCLADLFH-SIANQKRKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNT 135
Query: 208 LESCCLDSKTKDE--------SLSSQGDN-------IVQRVFGGCLISKLQCCNCGSCSD 252
+ + + +D+ +L SQ +N V +F G L ++ +C C + S
Sbjct: 136 IADLLQEERKQDKQNGKLANGTLDSQNNNSTPPSTTWVHEIFQGTLTNETRCLTCETISS 195
Query: 253 TYEPLIDLSLEIEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPS 312
E +DLS+++E S+ L F+ E + E K+ CE+C+ + K++ + K+P
Sbjct: 196 KDEDFLDLSVDVEQNTSITHCLRGFSNTETL-CSEYKYYCEECRSKQEAHKRMRVKKLPM 254
Query: 313 VAAFHLKRFKT--DGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGS 370
+ A HLKRFK K+ V FPLEL L + + G ++ E Y L A+V H GS
Sbjct: 255 ILALHLKRFKYMEQLQRYTKLSYRVVFPLELRL--FNTSGDATNPERLYDLVAVVVHCGS 312
Query: 371 SPTCGHYFSYIRSSPDTWHRLNDSRVTRVE----EEFVL--------SQDAYILFY 414
P GHY + ++S D W +D V +++ EEF S+ YILFY
Sbjct: 313 GPNRGHYIAIVKSH-DFWLLFDDDIVEKIDAQAIEEFYGLTSEISKNSESGYILFY 367
>gi|299856909|pdb|3NHE|A Chain A, High Resolution Structure (1.26a) Of Usp2a In Complex With
Ubiquitin
Length = 348
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 117/338 (34%), Positives = 162/338 (47%), Gaps = 39/338 (11%)
Query: 108 AGLENLGNTCFINAILQCFTHTLPL----VQALRSFDHPRPCDGATEGFCVICALRDHIE 163
AGL NLGNT F+N+ILQC ++T L +Q L D + T L I
Sbjct: 10 AGLRNLGNTXFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALVEEFAKLIQTIW 69
Query: 164 LSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLES----CCLDSKTKD 219
S S V+SP + + + F Y Q+DA EFL+ LLD L + L K+
Sbjct: 70 TS--SPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNP 127
Query: 220 ESLS----------------SQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE 263
E+L + D+ + +F G L S L C +CG CS ++P DLSL
Sbjct: 128 ENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLP 187
Query: 264 IEDVG----SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLK 319
I G +L + FTK E + D + K TC +C+ + K+ + + P + HLK
Sbjct: 188 IAKRGYPEVTLMDCMRLFTK-EDVLDGDEKPTCCRCRGRKRCIKKFSIQRFPKILVLHLK 246
Query: 320 RFKTDGSYVVKIDKHVEFPL-ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYF 378
RF K+ V FPL +LDL+ + S N V Y+LYA+ H G++ GHY
Sbjct: 247 RFSESRIRTSKLTTFVNFPLRDLDLREFASENTNHAV---YNLYAVSNHSGTT-MGGHYT 302
Query: 379 SYIRSSPDT--WHRLNDSRVTRVEEEFVLSQDAYILFY 414
+Y R SP T WH NDS VT + V + DAY+LFY
Sbjct: 303 AYCR-SPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLFY 339
>gi|89269005|emb|CAJ81533.1| ubiquitin specific protease 3 [Xenopus (Silurana) tropicalis]
Length = 522
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 120/361 (33%), Positives = 168/361 (46%), Gaps = 57/361 (15%)
Query: 107 GAGLENLGNTCFINAILQ---------CFTHTLPLVQ------ALRSFDHPRPCDGATEG 151
GL NLGNTCF+NAILQ C+ LP V+ A R H R
Sbjct: 160 ATGLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRTYHTR--SQGDVN 217
Query: 152 FCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESC 211
++ R + + SP L + I F+ YQQ+DAHEF++ LLD L
Sbjct: 218 VSLVEEFRKTLCALWQGNQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH-- 275
Query: 212 CLDSKTK----DESLSSQGD---------------NIVQRVFGGCLISKLQCCNCGSCSD 252
L+ + + S+ SQ + +V VFGG L +++ C CG+ S
Sbjct: 276 -LELQGEFDGSSHSVLSQANCSRSACNKCCINGASTVVTSVFGGVLQNEVNCLICGTESR 334
Query: 253 TYEPLIDLSLEIED--------------VGSLGSALESFTKLEKIEDPETKFTCEKCKEQ 298
++P +DLSL+I +L L SFT LE++++ E +TC KCK++
Sbjct: 335 KFDPFLDLSLDIPSQFRNKRCKNQENGPTCTLRDCLRSFTDLEELDETEL-YTCLKCKKK 393
Query: 299 VSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE-LDLKPYTSGGQNSDVE- 356
K+ + K+P V HLKRF K+D +V+FPL LD+K + +N E
Sbjct: 394 QKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVDFPLRGLDMKSFLLEPENIGPES 453
Query: 357 LKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAK 416
Y L A+V H GS GHY +Y + W NDS VT EEE V AYILFY +
Sbjct: 454 CLYDLAAVVVHHGSGVGSGHYTAYA-THKGRWFHFNDSTVTLTEEETVAKAKAYILFYVE 512
Query: 417 Q 417
+
Sbjct: 513 R 513
>gi|340374569|ref|XP_003385810.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like
[Amphimedon queenslandica]
Length = 349
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 101/340 (29%), Positives = 168/340 (49%), Gaps = 39/340 (11%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL N GNTC+ N++LQ LP + + + H G + ++ AL D + + ++S
Sbjct: 22 GLTNFGNTCYANSVLQALYFCLPFREKVLQYSH-----GEEKTETLLSALSD-LFIQMSS 75
Query: 169 SGK---VLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
S K V++PRK + + + F QQ+DAHEFL LL+ + K + S
Sbjct: 76 SKKKFGVVAPRKFIQRVKKENVVFDNMQQQDAHEFLNYLLNTIADLL---KAQMPESSED 132
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+ + +F G L+++ +C +C + E +DLS++IE S+ L+ F+ E +
Sbjct: 133 TNTWIHDIFQGVLVNETKCLSCETVRSKQEDFLDLSVDIEQNSSITHCLKMFSGSETL-S 191
Query: 286 PETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKH------VEFPL 339
E K+ CE+C + K+L + K+P++ A HLKRFK ++ ++ +H V FP
Sbjct: 192 SEYKYYCEQCCSKQEATKRLRIKKLPTILALHLKRFK----FMEQLHRHTKLSHRVVFPW 247
Query: 340 ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTW-----HRLNDS 394
EL L + + SD + Y L +V H G+ P GHY S I+S W L +
Sbjct: 248 ELKL--FNTSDDASDPDRMYDLIGVVIHCGTGPNRGHYISVIKSH-GYWLXXXXXXLQEI 304
Query: 395 RVTRVEEEFVLS--------QDAYILFYAKQGTEWVSSLL 426
+E+ F L+ + AYILFY + +E+ ++
Sbjct: 305 EPHSIEQFFGLTDSQTSLPNESAYILFYKTRESEYTYEMV 344
>gi|6492124|gb|AAF14189.1|AF106658_1 deubiquitinating enzyme Ubp45 [Rattus norvegicus]
Length = 396
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 117/338 (34%), Positives = 159/338 (47%), Gaps = 39/338 (11%)
Query: 108 AGLENLGNTCFINAILQCFTHTLPL----VQALRSFDHPRPCDGATEGFCVICALRDHIE 163
AGL NLGNTCF+N+ILQC ++T L +Q L D T L I
Sbjct: 58 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLGHTSSAHTALMEEFAKLIQTIW 117
Query: 164 LSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLES----CCLDSKTKD 219
S S V+SP + + + F Y Q+DA EFL+ LLD L + K
Sbjct: 118 TS--SPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVAARPKPSP 175
Query: 220 ESLS----------------SQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE 263
ESL + D+ + +F G L S L C +CG CS ++P DLSL
Sbjct: 176 ESLDHLPDEEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLP 235
Query: 264 IEDVG----SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLK 319
I G +L + FTK E + D + K TC +C+ + K+ + + P + HLK
Sbjct: 236 IAKRGYPEVTLMDCMRLFTK-EDVLDGDEKPTCCRCRARKRCIKKFSVQRFPKILVLHLK 294
Query: 320 RFKTDGSYVVKIDKHVEFPL-ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYF 378
RF K+ V FPL +LDL+ + S N V Y+LYA+ H G++ GHY
Sbjct: 295 RFSESRIRTSKLTTFVNFPLRDLDLREFASENTNHAV---YNLYAVSNHSGTT-MGGHYT 350
Query: 379 SYIRSSPDT--WHRLNDSRVTRVEEEFVLSQDAYILFY 414
+Y R SP T WH NDS VT + V + DAY+ FY
Sbjct: 351 AYCR-SPVTGEWHTFNDSSVTPMSSSQVRTSDAYLFFY 387
>gi|432851662|ref|XP_004067022.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Oryzias
latipes]
Length = 1074
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 117/386 (30%), Positives = 180/386 (46%), Gaps = 53/386 (13%)
Query: 68 IYRDTRPISSSYGRYNWGSSLLSRPVEKHWPIQIKPT--GVGA---GLENLGNTCFINAI 122
I RDT+P+++ + ++RP + PT G+GA GL NLGNTC++N+I
Sbjct: 702 INRDTKPVTAKV----YSKVEIARPSAAKI-RSLNPTFGGMGASLTGLRNLGNTCYMNSI 756
Query: 123 LQCFTHTLPLVQALRSFDHPRPCDGA---------TEGFCVICALRDHIELSLASSGKVL 173
LQC +T + + S + + + E F VI ++ A K +
Sbjct: 757 LQCLCNTPAMAEYFNSNYYLEDINRSNILGHKGEFAEEFGVI------MKALWAGLYKCI 810
Query: 174 SPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRL----------------ESCCLDSKT 217
SPR + I+ F Y Q+D+ E L L+D L E+ LD +T
Sbjct: 811 SPRDFKITIGKINDQFAGYDQQDSQELLLFLMDGLHEDLNKADNKKRYKEEENDHLDDQT 870
Query: 218 KDESLSSQ----GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVG--SLG 271
+ S+ ++I+ +F G S +QC C S T+E + LSL + SL
Sbjct: 871 AADLAWSKHKLLNESIIVALFQGQFKSTVQCSTCHRKSRTFETFMYLSLPLASTSKCSLQ 930
Query: 272 SALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKI 331
L F+K EK+ D K C CK K+L + KVP + HLKRF +G + K+
Sbjct: 931 DCLRLFSKEEKLTD-NNKVFCRHCKAHRDSTKKLEIWKVPPILLVHLKRFSYEGRWKQKL 989
Query: 332 DKHVEFPLE-LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIR-SSPDTWH 389
V+FPL+ LDL Y G + + +Y+LY + H G GHY +Y + ++ W+
Sbjct: 990 QTTVDFPLDNLDLTQYVIGPKQT--LKRYYLYGVSNHYGGL-DGGHYTAYCKNATKQRWY 1046
Query: 390 RLNDSRVTRVEEEFVLSQDAYILFYA 415
+ +D V+ + V S AYILFY+
Sbjct: 1047 KFDDHEVSEISTSSVKSSAAYILFYS 1072
>gi|429327458|gb|AFZ79218.1| Ubiquitin carboxyl-terminal hydrolase family member protein
[Babesia equi]
Length = 668
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 108/342 (31%), Positives = 161/342 (47%), Gaps = 36/342 (10%)
Query: 104 TGVGAGLENLG-NTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEG-FCVICALRDH 161
T VG+GL N G N C++N I+Q +HT L AL H C T+ CV+C L +H
Sbjct: 79 TRVGSGLNNPGINICYMNVIIQVISHTPFLSSALIRSGHTNVCPNYTKRILCVMCLLENH 138
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCC--------- 212
++ S +S + +P + I F+ QQ+DA FL+ L+ L C
Sbjct: 139 VKASTSSRKPLNNPFYPIAQ-KVIWLKFKFGQQDDAFIFLKHFLNSLIKSCYSITASPVM 197
Query: 213 --------LDSKTKDES-----LSSQG--DNIVQRVFGGCLISKLQCCNCGSCSDTYEPL 257
+D + E LS++ + + +FGG + + C C S+ EP
Sbjct: 198 DNNRTRMAMDKEANSEKETRDILSTEKIMSSAIGHLFGGFFKNVIVCEKCKLKSEKVEPF 257
Query: 258 IDLSLEIEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFH 317
D+ + + L L +F EK+ + K+ C+ CK + +K L + K P + +
Sbjct: 258 FDIPVHVNKSNKLIDLLSTFLLPEKL-ICDNKYFCKICKSHQNADKSLSIYKSPRILNIN 316
Query: 318 LKRFKTDGSYVVKIDKHVEFP--LELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCG 375
LKRF + K K +EFP L L LK + ++ LKY LYAIV H+G S G
Sbjct: 317 LKRFNVSSHGLEKSTKAIEFPQSLSLSLKHEV----DREIRLKYQLYAIVCHIGKSLRMG 372
Query: 376 HYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQ--DAYILFYA 415
HY +YI+ W+ +DS V V E V SQ D Y+LFY+
Sbjct: 373 HYITYIKGHHGFWYCFDDSNVRCVSESKVFSQKNDVYLLFYS 414
>gi|213983223|ref|NP_001135522.1| ubiquitin specific peptidase 2 [Xenopus (Silurana) tropicalis]
gi|195540057|gb|AAI67952.1| Unknown (protein for MGC:147993) [Xenopus (Silurana) tropicalis]
Length = 383
Score = 142 bits (358), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 114/343 (33%), Positives = 167/343 (48%), Gaps = 42/343 (12%)
Query: 108 AGLENLGNTCFINAILQCFTHT-----LPLVQALRSFDHPRPCDGAT-EGFCVICALRDH 161
GL NLGNTCF+N+ILQC ++T L + R + C+ A E F +
Sbjct: 46 VGLRNLGNTCFMNSILQCLSNTKDLRDYCLQNSYRRDLSSKKCNTAIMEEFARLLQ---- 101
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLES----CCLDSKT 217
+ +S+ +V+SP + + + F Y Q+DA EFL+ LLD L + + +
Sbjct: 102 -AIWTSSANEVVSPSEFKTQIQKYAPRFMGYNQQDAQEFLRFLLDGLHNEVNRVTVKPRP 160
Query: 218 KDESL-----SSQGDNIVQR-----------VFGGCLISKLQCCNCGSCSDTYEPLIDLS 261
+ L S +G ++ +R +F G L S L C CG CS ++P DLS
Sbjct: 161 SSQDLDHMPDSEKGKHMWKRYLEREDSRIVELFVGQLKSSLTCTECGYCSTVFDPFWDLS 220
Query: 262 LEIEDVG----SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFH 317
L I SL + FTK E + D + K TC +CK + K+ + K P + H
Sbjct: 221 LPIAKKSASEVSLVDCMRLFTK-EDVLDGDEKPTCCRCKARRRCTKKFTIQKFPKILVLH 279
Query: 318 LKRFKTDGSYVVKIDKHVEFPL-ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGH 376
LKRF K+ V FPL +LDL+ ++S S+ Y+LYA+ H G++ GH
Sbjct: 280 LKRFSEGRIRSGKLSTFVNFPLKDLDLREFSS---ESNPHATYNLYAVSNHSGTT-MGGH 335
Query: 377 YFSYIRS-SPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQG 418
Y +Y ++ S W+ NDSRVT + V S DAY+LFY G
Sbjct: 336 YTAYCKNPSNGEWYTFNDSRVTAMSSNQVRSSDAYVLFYELSG 378
>gi|291233105|ref|XP_002736494.1| PREDICTED: deubiquitinating enzyme 1-like, partial [Saccoglossus
kowalevskii]
Length = 308
Score = 142 bits (358), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 110/188 (58%), Gaps = 4/188 (2%)
Query: 106 VGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELS 165
+GAGL NLGNTCF+N+ILQC T+T PL L S H + C A GFC++C L+ H +
Sbjct: 125 IGAGLMNLGNTCFLNSILQCLTYTPPLTNYLLSQQHSQSCREA--GFCMMCELQRHAGRA 182
Query: 166 LASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQ 225
G + P ++ + I F+ QEDAHEFL+C+ + ++ CL K E S +
Sbjct: 183 FHQCGSAIRPMVIIQKIKNIGKQFRYGHQEDAHEFLRCVTEAMQKSCLVGYEKLEKHSKE 242
Query: 226 GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIED 285
+V ++FGG S++QC C SDT++P +D+SL+I+ V S+ ALE K E + D
Sbjct: 243 -TTLVHQIFGGYYRSRVQCNKCQEISDTHDPFLDISLDIKHVPSIIKALERMIKPETL-D 300
Query: 286 PETKFTCE 293
+ + C+
Sbjct: 301 NDNMYMCK 308
>gi|313242252|emb|CBY34415.1| unnamed protein product [Oikopleura dioica]
Length = 927
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 101/341 (29%), Positives = 158/341 (46%), Gaps = 47/341 (13%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDG---------ATEGFCVICALR 159
GL+NLGNTC++N+I+Q PLV+ + + + E F V+
Sbjct: 586 GLKNLGNTCYMNSIIQSLGSLAPLVEKFLTDKYRADINKKNFLGHKGLVAEHFAVVAKGL 645
Query: 160 DHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKD 219
H K PR + L + F Y+Q+DA E L LLD L +K KD
Sbjct: 646 WH------GGFKNFQPRMFKEALASCNPIFGNYKQQDAQELLIFLLDGLHEDL--NKVKD 697
Query: 220 ESLSSQGD----------------------NIVQRVFGGCLISKLQCCNCGSCSDTYEPL 257
+ D +I+ +F G + ++C +C S ++
Sbjct: 698 RRYIEEKDADGRPDQLVADESWENHTRLNKSIIVDLFQGQFKATIKCLSCKFTSVKFDAF 757
Query: 258 IDLSLEIEDVG--SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAA 315
+ LSL I G +L S L F + EK+ + ++TC KCK E+ L L ++P++
Sbjct: 758 MFLSLPIPTSGKATLESCLNLFQQTEKLTG-DDRWTCPKCKRARDAERTLRLWRMPTLLI 816
Query: 316 FHLKRFKTDGSYVVKIDKHVEFPLE-LDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTC 374
HLKRFK+DG + K+ ++ +P DLKP T G + + Y+L A+ H+G+S
Sbjct: 817 IHLKRFKSDGRWKSKVSTNISYPTTGFDLKPQTLGKKK---QPPYNLIAVTHHIGASTDS 873
Query: 375 GHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYA 415
GHY + R + W + +D+ VT + E +S AYILFY+
Sbjct: 874 GHYVASCRRA-KGWVKADDAEVTAISESKAISPTAYILFYS 913
>gi|251765093|sp|C0HB46.1|UBP12_SALSA RecName: Full=Ubiquitin carboxyl-terminal hydrolase 12; AltName:
Full=Deubiquitinating enzyme 12; AltName: Full=Ubiquitin
thioesterase 12; AltName:
Full=Ubiquitin-specific-processing protease 12
gi|223649014|gb|ACN11265.1| Ubiquitin carboxyl-terminal hydrolase 12 [Salmo salar]
Length = 372
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 168/357 (47%), Gaps = 55/357 (15%)
Query: 92 PVEKHWPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSF-DHPRPCDGATE 150
PV +H+ GL N GNTC+ N++LQ P + + ++ PR +
Sbjct: 33 PVNEHY----------FGLVNFGNTCYCNSVLQALYFCRPFREKILAYRSQPRRKEN--- 79
Query: 151 GFCVICALRDHIELSLASSGK---VLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDR 207
++ L D S+A+ + V+ P+K + L + F Y Q+DAHEFL LL+
Sbjct: 80 ---LLTCLADLFH-SIANQKRKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNT 135
Query: 208 LESCCLDSKTKDE--------SLSSQGDN--------IVQRVFGGCLISKLQCCNCGSCS 251
+ + + +D+ SL SQ N V +F G L ++ +C C + S
Sbjct: 136 IADLLQEERKQDKTNGRLANGSLDSQNHNSNAPPPSTWVHEIFQGTLTNETRCLTCETIS 195
Query: 252 DTYEPLIDLSLEIEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVP 311
E +DLS+++E S+ L F+ E + E K+ CE+C+ + K++ + K+P
Sbjct: 196 SKDEDFLDLSVDVEQNTSITHCLRGFSNTETL-CSEYKYYCEECRSKQEAHKRMRVKKLP 254
Query: 312 SVAAFHLKRFKT--DGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMG 369
+ A HLKRFK K+ V FPLEL L + + G ++ E Y L A+V H G
Sbjct: 255 MILALHLKRFKYMEQLQRYTKLSYRVVFPLELRL--FNTSGDATNPERLYDLVAVVVHCG 312
Query: 370 SSPTCGHYFSYIRSSPDTWHRLNDSRVTRVE----EEFVL--------SQDAYILFY 414
S P GHY + ++S D W +D V +++ EEF S+ YILFY
Sbjct: 313 SGPNRGHYIAIVKSH-DFWLLFDDDIVEKIDAQAIEEFYGLTSEISKNSESGYILFY 368
>gi|226531818|ref|NP_001142184.1| uncharacterized protein LOC100274352 [Zea mays]
gi|194703162|gb|ACF85665.1| unknown [Zea mays]
gi|194707512|gb|ACF87840.1| unknown [Zea mays]
gi|414865257|tpg|DAA43814.1| TPA: putative ubiquitin carboxyl-terminal hydrolase superfamily
protein [Zea mays]
Length = 366
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 108/348 (31%), Positives = 165/348 (47%), Gaps = 54/348 (15%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICA--LRDHIELSL 166
GLEN GNTC+ N++LQ +P L + G E + C L I
Sbjct: 24 GLENFGNTCYCNSVLQALYFCVPFRDQLLEYYANNKNTGDVEENMLTCLADLFSQISSQK 83
Query: 167 ASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLL----DRLESCCLDSKTKDESL 222
+G V++P++ + L + F+ Y +DAHEFL LL D LE ++ ++L
Sbjct: 84 KKTG-VIAPKRFIQRLKKQNEIFRSYMHQDAHEFLNFLLNELVDILEKEHNAARESLQNL 142
Query: 223 SSQGDN------------------IVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEI 264
S Q ++ V + F G L ++ +C C + +D E DLSL+I
Sbjct: 143 SLQKNSNGPIDGQPNGSHKELAVTWVHKCFQGILTNETRCLRCETVTDRDETFFDLSLDI 202
Query: 265 EDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTD 324
E SL S L++F+ E + + E KF C+KC +K++ + K P++ HLKRFK
Sbjct: 203 EQNSSLTSCLKNFSSTETL-NAEDKFFCDKCCSLQEAQKRMKIKKPPNILVIHLKRFK-- 259
Query: 325 GSYVVKIDKH------VEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYF 378
Y+ ++ ++ V FPLEL L + NSD+E Y L+A+V H+GS P GHY
Sbjct: 260 --YIEQLQRYKKLSYRVVFPLELKL---LNTVDNSDLE--YSLFAVVVHVGSGPNHGHYI 312
Query: 379 SYIRSSPDTWHRLNDSRVTRVEEEFVL------------SQDAYILFY 414
S ++S + W +D V +E V + + YILFY
Sbjct: 313 SLVKSH-NHWLFFDDENVEMTDESMVQAFFGSPQEFSGNTDNGYILFY 359
>gi|315053813|ref|XP_003176281.1| ubiquitin carboxyl-terminal hydrolase 8 [Arthroderma gypseum CBS
118893]
gi|311338127|gb|EFQ97329.1| ubiquitin carboxyl-terminal hydrolase 8 [Arthroderma gypseum CBS
118893]
Length = 486
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 106/329 (32%), Positives = 152/329 (46%), Gaps = 30/329 (9%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRP-CDGATEGFCVICALRDHI-ELSL 166
GL NLG TC++N ILQ H L H C C CAL D E S
Sbjct: 164 GLFNLGQTCYMNVILQTLFHEPVLTAYFLGNGHSTSECQKVN---CFGCALADAFAEFSN 220
Query: 167 ASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQG 226
+ L+ SS Y Q+DAHEF Q L+++L +S T
Sbjct: 221 EEKDEGFGALNLLLASWQKSSDLAGYHQQDAHEFYQFLVNQLH----ESTTGHLDCDPAC 276
Query: 227 DNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE---------------DVG-SL 270
F G L S + C NCG S T +P++D+SL+++ DV +L
Sbjct: 277 RCFFHTAFFGKLRSTITCRNCGKVSRTEDPVMDVSLDLQVQKKKRALDGGEQSSDVAPTL 336
Query: 271 GSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVK 330
LE + EK+ E + C +C V KQL L K+P + LKRF+ + S K
Sbjct: 337 QGCLEGYISPEKLAASE--YGCTQCNSNKGVTKQLRLRKLPVILCMQLKRFERNRSVSEK 394
Query: 331 IDKHVEFPLELDLKPYTSGGQNSD-VELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWH 389
++ V +P +++ PYT+ ++ + + +Y L ++V H+G + GHY +Y R + W
Sbjct: 395 VETKVTYPASINMMPYTTSPRSENRSQFQYDLLSVVVHIGDIDS-GHYLAYCRHG-EQWF 452
Query: 390 RLNDSRVTRVEEEFVLSQDAYILFYAKQG 418
+ ND RVT V E VL DAY+LFY Q
Sbjct: 453 KFNDDRVTVVAESEVLEADAYLLFYTLQA 481
>gi|18399935|ref|NP_565532.1| ubiquitin carboxyl-terminal hydrolase 4 [Arabidopsis thaliana]
gi|62901382|sp|Q8LAM0.2|UBP4_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 4; AltName:
Full=Deubiquitinating enzyme 4; Short=AtUBP4; AltName:
Full=Ubiquitin thioesterase 4; AltName:
Full=Ubiquitin-specific-processing protease 4
gi|2347100|gb|AAB67967.1| ubiquitin-specific protease [Arabidopsis thaliana]
gi|4567196|gb|AAD23612.1| ubiquitin-specific protease 4 (UBP4) [Arabidopsis thaliana]
gi|15081737|gb|AAK82523.1| At2g22310/T26C19.3 [Arabidopsis thaliana]
gi|18252271|gb|AAL62016.1| At2g22310/T26C19.3 [Arabidopsis thaliana]
gi|330252197|gb|AEC07291.1| ubiquitin carboxyl-terminal hydrolase 4 [Arabidopsis thaliana]
Length = 365
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 161/350 (46%), Gaps = 48/350 (13%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
G EN GNTC+ N++LQ P + L D + L I
Sbjct: 24 GFENFGNTCYCNSVLQALYFCAPFREQLLEHYANNKADAEENLLTCLADLFSQISSQKKK 83
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTK----DESLSS 224
+G V++P++ V L + F+ Y +DAHEFL LL+ L L+ +T+ D SS
Sbjct: 84 TG-VIAPKRFVQRLKKQNELFRSYMHQDAHEFLNYLLNELVEI-LEKETQATKADNETSS 141
Query: 225 QGDNI--------------------VQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEI 264
+ I V ++F G L ++ +C C + + E +DLSL+I
Sbjct: 142 SPEKIANVLKAPLANGVHKEPIVTWVHKIFQGILTNETRCLRCETVTARDETFLDLSLDI 201
Query: 265 EDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTD 324
E S+ S L++F+ E + E KF C+KC +K++ + K P + HLKRFK
Sbjct: 202 EQNSSITSCLKNFSSTETLH-AEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYM 260
Query: 325 ---GSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYI 381
G Y K+ V FPLEL L S + V+++Y L+A+V H+GS P GHY S +
Sbjct: 261 EQLGRY-KKLSYRVVFPLELKL----SNTVDEYVDIEYSLFAVVVHVGSGPNHGHYVSLV 315
Query: 382 RSSPDTWHRLNDSRVTRVEEE-----FVLSQD-------AYILFYAKQGT 419
+S + W +D V +EE F SQ+ YIL Y GT
Sbjct: 316 KSH-NHWLFFDDESVEIIEESAVQTFFGSSQEYSSNTDHGYILLYESLGT 364
>gi|18420557|ref|NP_568074.1| ubiquitin carboxyl-terminal hydrolase 3 [Arabidopsis thaliana]
gi|62901126|sp|O24454.1|UBP3_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 3; AltName:
Full=Deubiquitinating enzyme 3; Short=AtUBP3; AltName:
Full=Ubiquitin thioesterase 3; AltName:
Full=Ubiquitin-specific-processing protease 3
gi|2347098|gb|AAB67966.1| ubiquitin-specific protease [Arabidopsis thaliana]
gi|4490742|emb|CAB38904.1| ubiquitin-specific protease (AtUBP3) [Arabidopsis thaliana]
gi|7271046|emb|CAB80654.1| ubiquitin-specific protease (AtUBP3) [Arabidopsis thaliana]
gi|16604539|gb|AAL24275.1| AT4g39910/T5J17_80 [Arabidopsis thaliana]
gi|18958042|gb|AAL79594.1| AT4g39910/T5J17_80 [Arabidopsis thaliana]
gi|332661736|gb|AEE87136.1| ubiquitin carboxyl-terminal hydrolase 3 [Arabidopsis thaliana]
Length = 371
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 117/357 (32%), Positives = 168/357 (47%), Gaps = 59/357 (16%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLV-QALRSFDHPRPCDGATEGFCVICA-LRDHIELSL 166
G EN GNTC+ N++LQ +P Q L + + A E A L I
Sbjct: 24 GFENFGNTCYCNSVLQALYFCVPFREQLLEYYTSNKSVADAEENLMTCLADLFSQISSQK 83
Query: 167 ASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLL----DRLESCCLDSKTKDESL 222
+G V++P++ V L + F+ Y +DAHEFL LL D LE +KT+ E+
Sbjct: 84 KKTG-VIAPKRFVQRLKKQNELFRSYMHQDAHEFLNYLLNEVVDILEKEAKATKTEHETS 142
Query: 223 SS-------------QGDNIVQR---------VFGGCLISKLQCCNCGSCSDTYEPLIDL 260
SS Q + +V + +F G L ++ +C C + + E +DL
Sbjct: 143 SSSSPEKIANGLKVPQANGVVHKEPIVTWVHNIFQGILTNETRCLRCETVTARDETFLDL 202
Query: 261 SLEIEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKR 320
SL+IE S+ S L++F+ E + E KF C+KC +K++ + K P + HLKR
Sbjct: 203 SLDIEQNSSITSCLKNFSSTETLH-AEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKR 261
Query: 321 FKTD---GSYVVKIDKHVEFPLELDL----KPYTSGGQNSDVELKYHLYAIVEHMGSSPT 373
FK G Y K+ V FPLEL L +PY +DVE Y L+A+V H+GS P
Sbjct: 262 FKYIEQLGRY-KKLSYRVVFPLELKLSNTVEPY------ADVE--YSLFAVVVHVGSGPN 312
Query: 374 CGHYFSYIRSSPDTWHRLNDSRVTRVEEE-----FVLSQD-------AYILFYAKQG 418
GHY S ++S + W +D V +EE F SQ+ YILFY G
Sbjct: 313 HGHYVSLVKSH-NHWLFFDDENVEMIEESAVQTFFGSSQEYSSNTDHGYILFYESLG 368
>gi|297802104|ref|XP_002868936.1| ubiquitin-specific protease 3 [Arabidopsis lyrata subsp. lyrata]
gi|297314772|gb|EFH45195.1| ubiquitin-specific protease 3 [Arabidopsis lyrata subsp. lyrata]
Length = 371
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 117/357 (32%), Positives = 168/357 (47%), Gaps = 59/357 (16%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLV-QALRSFDHPRPCDGATEGFCVICA-LRDHIELSL 166
G EN GNTC+ N++LQ +P Q L + + A E A L I
Sbjct: 24 GFENFGNTCYCNSVLQALYFCVPFREQLLEYYTSNKSVADAEENLMTCLADLFSQISSQK 83
Query: 167 ASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLL----DRLESCCLDSKTKDESL 222
+G V++P++ V L + F+ Y +DAHEFL LL D LE +KT+ E+
Sbjct: 84 KKTG-VIAPKRFVQRLKKQNELFRSYMHQDAHEFLNYLLNEVVDILEKEAKATKTEHETS 142
Query: 223 SS-------------QGDNIVQR---------VFGGCLISKLQCCNCGSCSDTYEPLIDL 260
SS Q + +V + +F G L ++ +C C + + E +DL
Sbjct: 143 SSSSPEKIANGLKVPQANGVVHKEPIVTWVHNIFQGILTNETRCLRCETVTARDETFLDL 202
Query: 261 SLEIEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKR 320
SL+IE S+ S L++F+ E + E KF C+KC +K++ + K P + HLKR
Sbjct: 203 SLDIEQNSSITSCLKNFSSTETLH-AEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKR 261
Query: 321 FKTD---GSYVVKIDKHVEFPLELDL----KPYTSGGQNSDVELKYHLYAIVEHMGSSPT 373
FK G Y K+ V FPLEL L +PY +DVE Y L+A+V H+GS P
Sbjct: 262 FKYIEQLGRY-KKLSYRVVFPLELKLSNTVEPY------ADVE--YSLFAVVVHVGSGPN 312
Query: 374 CGHYFSYIRSSPDTWHRLNDSRVTRVEEE-----FVLSQD-------AYILFYAKQG 418
GHY S ++S + W +D V +EE F SQ+ YILFY G
Sbjct: 313 HGHYVSLVKSH-NHWLFFDDENVEMIEESAVQTFFGSSQEYSSNTDHGYILFYESLG 368
>gi|357163877|ref|XP_003579876.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like
[Brachypodium distachyon]
Length = 368
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 106/349 (30%), Positives = 162/349 (46%), Gaps = 48/349 (13%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSF--DHPRPCDGATEGFCVICALRDHIELSL 166
GLEN GNTC+ N++LQ P + L + ++ P D + L + S
Sbjct: 26 GLENFGNTCYCNSVLQALYFCTPFREQLLEYYANNKSPGDAEENLLTCLADLFMQVSQSK 85
Query: 167 ASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL--DSKTKDESLSS 224
+G V++P++ V + + F+ Y +DAHEFL LL+ L S KD SS
Sbjct: 86 KKTG-VIAPKRFVQRVKKQNELFRSYMHQDAHEFLNFLLNELVDILEKESSAAKDSPQSS 144
Query: 225 QGDNI--------------------VQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEI 264
+ + V + F G L ++ +C C + + E DLS++I
Sbjct: 145 SPEKVPNGPVQPLANGVKKEPPITLVHKNFQGILTNETRCLRCETVTARDETFFDLSVDI 204
Query: 265 EDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTD 324
E S+ S L++F+ E + + E KF C+KC +K++ + K P + HLKRFK
Sbjct: 205 EQNSSITSCLKNFSSTETL-NAEDKFFCDKCCSLQEAQKRMKIKKAPHILVIHLKRFKYI 263
Query: 325 ---GSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYI 381
G Y K+ V FP+EL + + DV+ +Y L+A+V H+GS P GHY S +
Sbjct: 264 EQLGRYK-KLSYRVVFPMELKI-----SSTSDDVDTEYSLFAVVVHVGSGPNHGHYVSLV 317
Query: 382 RSSPDTWHRLNDSRVTRVEE-----------EFVLSQD-AYILFYAKQG 418
+S + W +D V VEE E+ + D YILFY G
Sbjct: 318 KSH-NHWLFFDDENVEMVEESTLQTFFGSSHEYSGNTDHGYILFYEGLG 365
>gi|242076010|ref|XP_002447941.1| hypothetical protein SORBIDRAFT_06g018520 [Sorghum bicolor]
gi|241939124|gb|EES12269.1| hypothetical protein SORBIDRAFT_06g018520 [Sorghum bicolor]
Length = 368
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 106/348 (30%), Positives = 163/348 (46%), Gaps = 46/348 (13%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GLEN GNTC+ N++LQ +P + L + G E + C +++S A
Sbjct: 26 GLENFGNTCYCNSVLQALYFCIPFREQLLEYYANNKTPGDAEENLLTCLADLFMQISQAK 85
Query: 169 SGK-VLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRL-------ESCCLDS----- 215
V++P++ V + + F+ Y +DAHEFL LL+ L S DS
Sbjct: 86 KKTGVIAPKRFVQRVKKQNELFRSYMHQDAHEFLNFLLNELVDILEKESSAAKDSPQLSS 145
Query: 216 --KTKDESLSSQGDNI--------VQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE 265
K + + + + V + F G L ++ +C C + + E +DLS++IE
Sbjct: 146 PEKAPNGPVQPLANGVKKEPPVTLVHKNFQGILTNETRCLRCETVTARDETFLDLSVDIE 205
Query: 266 DVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTD- 324
S+ S L++F E + + E KF C+KC +K++ + K P + HLKRFK
Sbjct: 206 QNSSITSCLKNFCSTETL-NAEDKFFCDKCCSLQEAQKRMKIKKAPHILVIHLKRFKYIE 264
Query: 325 --GSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIR 382
G Y K+ V FP+EL L + DV+ +Y L+A+V H+GS P GHY S ++
Sbjct: 265 QLGRYK-KLSYRVVFPMELKL-----SNTSDDVDTEYSLFAVVVHVGSGPNHGHYVSLVK 318
Query: 383 SSPDTWHRLNDSRVTRVEEE-----FVLSQD-------AYILFYAKQG 418
S + W +D V VEE+ F S + YILFY G
Sbjct: 319 SH-NHWLFFDDENVEMVEEQTLQTFFGSSHEYSGNTDHGYILFYEGLG 365
>gi|189194593|ref|XP_001933635.1| ubiquitin carboxyl-terminal hydrolase 2 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187979199|gb|EDU45825.1| ubiquitin carboxyl-terminal hydrolase 2 [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 517
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 107/349 (30%), Positives = 163/349 (46%), Gaps = 48/349 (13%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRP-CDGATEGFCVICALRD-HIELSL 166
GL N+G TCF++ ILQ H + S H + C+ A+ CV CAL + +E
Sbjct: 179 GLYNMGQTCFMSVILQTLVHNPFIRNFYLSEGHKQTDCENAS---CVSCALDEMFVEFHS 235
Query: 167 ASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQG 226
A + ++ YQQ+DAHE++Q +L+ L + + D+S +
Sbjct: 236 AEKTEGFGAVSMLMGSWLAGEALAGYQQQDAHEYMQFILNTLH--LANGGSTDDSEDCKC 293
Query: 227 DNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGS----------------L 270
+V + F G L S + C NC + + +P +DLSL++ G L
Sbjct: 294 --VVHQTFCGKLSSTVMCDNCRNVTTALDPYMDLSLDVRIQGKKRKQQLAEKGEETPLDL 351
Query: 271 GSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVK 330
LE FT EK+ + +TC C + KQL + ++P V + HLKRF+ S K
Sbjct: 352 RDCLERFTVKEKLGSAD--YTCRNCDSPQNATKQLSIKRLPPVLSIHLKRFEHTKSTSSK 409
Query: 331 IDKHVEFPLELDLKPYTSGGQ--------------NSDVE-----LKYHLYAIVEHMGSS 371
I+ V FP++LD+ PYT+ + N ++ L Y L +++ H G
Sbjct: 410 IETPVRFPVKLDIHPYTTAHKAAMRAAKTSGAPPSNHNINSPTNALIYELSSVIVHKGKI 469
Query: 372 PTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTE 420
+ GHY SY R D W +DS+V V E VL+ +AY+LFY G E
Sbjct: 470 DS-GHYISYSREGSD-WFMFDDSKVVLVSEAEVLAAEAYLLFYMVGGLE 516
>gi|115458702|ref|NP_001052951.1| Os04g0452400 [Oryza sativa Japonica Group]
gi|113564522|dbj|BAF14865.1| Os04g0452400 [Oryza sativa Japonica Group]
gi|215695550|dbj|BAG90741.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 367
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/349 (30%), Positives = 162/349 (46%), Gaps = 49/349 (14%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSF--DHPRPCDGATEGFCVICALRDHIELSL 166
GLEN GNTC+ N++LQ +P + L + ++ P D + L + S
Sbjct: 26 GLENFGNTCYCNSVLQALYFCIPFREKLLEYYANNKTPGDAEENLLTCLADLFMQVSQSK 85
Query: 167 ASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL--DSKTKDESLSS 224
+G V++P++ V + + F+ Y +DAHEFL LL+ L + KD SS
Sbjct: 86 KKTG-VIAPKRFVQRVKKQNELFRSYMHQDAHEFLNFLLNELVDILEKESNAAKDSPQSS 144
Query: 225 QGDNI--------------------VQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEI 264
+ + V + F G L ++ +C C + + E DLS++I
Sbjct: 145 SPEKVPNGPVQPLANGVRKEPPVTLVHKNFQGILTNETRCLRCETVTARDETFFDLSVDI 204
Query: 265 EDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTD 324
E S+ S L++F E + + E KF C+KC +K++ + K P + HLKRFK
Sbjct: 205 EQNSSITSCLKNFCSTETL-NAEDKFFCDKCCSLQEAQKRMKIKKAPHILVIHLKRFKYI 263
Query: 325 ---GSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYI 381
G Y K+ V FP+EL L + DV+ +Y L+A+V H+GS P GHY S +
Sbjct: 264 EQLGRYK-KLSYRVVFPMELKL------STSDDVDTEYSLFAVVVHVGSGPNHGHYVSLV 316
Query: 382 RSSPDTWHRLNDSRVTRVEE-----------EFVLSQD-AYILFYAKQG 418
+S + W +D V VEE E+ + D YILFY G
Sbjct: 317 KSH-NHWLFFDDENVEMVEESTLQTFFGSSHEYSGNTDHGYILFYEGLG 364
>gi|21740732|emb|CAD40853.1| OSJNBa0086B14.26 [Oryza sativa Japonica Group]
gi|116310175|emb|CAH67188.1| H0815C01.9 [Oryza sativa Indica Group]
gi|125548525|gb|EAY94347.1| hypothetical protein OsI_16114 [Oryza sativa Indica Group]
gi|125590577|gb|EAZ30927.1| hypothetical protein OsJ_15007 [Oryza sativa Japonica Group]
Length = 365
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/349 (30%), Positives = 162/349 (46%), Gaps = 49/349 (14%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSF--DHPRPCDGATEGFCVICALRDHIELSL 166
GLEN GNTC+ N++LQ +P + L + ++ P D + L + S
Sbjct: 24 GLENFGNTCYCNSVLQALYFCIPFREKLLEYYANNKTPGDAEENLLTCLADLFMQVSQSK 83
Query: 167 ASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL--DSKTKDESLSS 224
+G V++P++ V + + F+ Y +DAHEFL LL+ L + KD SS
Sbjct: 84 KKTG-VIAPKRFVQRVKKQNELFRSYMHQDAHEFLNFLLNELVDILEKESNAAKDSPQSS 142
Query: 225 QGDNI--------------------VQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEI 264
+ + V + F G L ++ +C C + + E DLS++I
Sbjct: 143 SPEKVPNGPVQPLANGVRKEPPVTLVHKNFQGILTNETRCLRCETVTARDETFFDLSVDI 202
Query: 265 EDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTD 324
E S+ S L++F E + + E KF C+KC +K++ + K P + HLKRFK
Sbjct: 203 EQNSSITSCLKNFCSTETL-NAEDKFFCDKCCSLQEAQKRMKIKKAPHILVIHLKRFKYI 261
Query: 325 ---GSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYI 381
G Y K+ V FP+EL L + DV+ +Y L+A+V H+GS P GHY S +
Sbjct: 262 EQLGRYK-KLSYRVVFPMELKL------STSDDVDTEYSLFAVVVHVGSGPNHGHYVSLV 314
Query: 382 RSSPDTWHRLNDSRVTRVEE-----------EFVLSQD-AYILFYAKQG 418
+S + W +D V VEE E+ + D YILFY G
Sbjct: 315 KSH-NHWLFFDDENVEMVEESTLQTFFGSSHEYSGNTDHGYILFYEGLG 362
>gi|401841065|gb|EJT43615.1| UBP8-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 473
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 109/337 (32%), Positives = 160/337 (47%), Gaps = 34/337 (10%)
Query: 108 AGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLA 167
+GL N+G+TCF+++ILQC H ++ H C + C CAL D I L
Sbjct: 137 SGLINMGSTCFMSSILQCLIHNPYFIRHSMRQIHSNKCKVRSPDKCFSCAL-DKIVHELY 195
Query: 168 SSGKVLSPRKLVDNLNYISSFFQR-------------YQQEDAHEFLQCLLDRLESCCLD 214
P N F Y Q+DAHEF Q L++ + +
Sbjct: 196 GVLNTDQPSSSSSATNRQGGFIHLLTCAWKINQSLAGYSQQDAHEFWQFLINEIHQSYVL 255
Query: 215 S----KTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDT-YEPLIDLSLEIEDVGS 269
S K D + + + D IV VF G L S + C C + S T +P +DLSL+I+D
Sbjct: 256 SLPNPKEVDRANNKRCDCIVHTVFEGSLESSIVCPGCQNNSKTTIDPFMDLSLDIKDKQK 315
Query: 270 LGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK--TDGSY 327
L L+SF K E ++D + C +C KQL + ++PSV LKRF+ +G+
Sbjct: 316 LYECLDSFHKKELLKD--FNYHCGECNSTQDAIKQLGIHRLPSVLVLQLKRFEHLLNGTN 373
Query: 328 VVKIDKHVEFPLELDLKPYTSGGQ--------NSDV-ELKYHLYAIVEHMGSSPTCGHYF 378
K+D +EFP L++K Y S + N V ++ Y L IV H G+ GHY
Sbjct: 374 R-KLDDFIEFPTYLNMKSYCSTAESESENHIGNGKVPDIIYELIGIVSHKGTVNE-GHYI 431
Query: 379 SYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYA 415
++ + S W + NDS V+ + +E VL + AY+LFY
Sbjct: 432 AFCKISGGQWFKFNDSMVSSISQEEVLKEQAYLLFYT 468
>gi|401881256|gb|EJT45558.1| ubiquitin thiolesterase 9 [Trichosporon asahii var. asahii CBS
2479]
Length = 850
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 144/280 (51%), Gaps = 25/280 (8%)
Query: 172 VLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRL--ESCCLDSKTKDES-----LSS 224
V+ P ++ + F Q+DAHEFL +L++L E +D+K K E +
Sbjct: 264 VVRPEDVLRTVRRTHQLFAGQGQQDAHEFLGFILNQLSEEVEQMDAKLKREGKDVVDIKE 323
Query: 225 QGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIE 284
G +Q +F G L+++ +C NC + S E +DLS++IE SL S L F+ E +
Sbjct: 324 HGRTFIQNLFHGVLVNETRCLNCETTSSREESFLDLSIDIEQHSSLTSCLRQFSDSEMLC 383
Query: 285 DPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDG-SYVVKIDKHVEFPLELDL 343
KF CE C V E+++ + ++P++ HLKRF+ D + K+ V FPL+L +
Sbjct: 384 S-TNKFYCETCCGLVEAERRMRIKELPNILGLHLKRFRQDDMGRLHKLFYRVTFPLQLRV 442
Query: 344 KPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
T + D E Y L+A+V H+G++PT GHY + +RS P W +D + +EE
Sbjct: 443 PCTTE--ETEDAERLYELFAVVVHIGNTPTHGHYVTIVRSQPGQWVMCDDENIEPIEESD 500
Query: 404 V-------LSQDAYILFYAKQGTEWVSSLLEAESIGMNAD 436
+ ++ Y+LFY ++ L+ +S+G+ D
Sbjct: 501 LANYFGDNITGAGYVLFYQ-------AANLDLKSLGLKKD 533
>gi|114053169|ref|NP_001039728.1| ubiquitin carboxyl-terminal hydrolase 2 [Bos taurus]
gi|122135912|sp|Q2KHV7.1|UBP2_BOVIN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 2; AltName:
Full=41 kDa ubiquitin-specific protease; AltName:
Full=Deubiquitinating enzyme 2; AltName: Full=Ubiquitin
thioesterase 2; AltName:
Full=Ubiquitin-specific-processing protease 2
gi|86438174|gb|AAI12867.1| Ubiquitin specific peptidase 2 [Bos taurus]
gi|296480118|tpg|DAA22233.1| TPA: ubiquitin specific peptidase 2 [Bos taurus]
gi|440904915|gb|ELR55367.1| Ubiquitin carboxyl-terminal hydrolase 2 [Bos grunniens mutus]
Length = 606
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 116/341 (34%), Positives = 160/341 (46%), Gaps = 45/341 (13%)
Query: 108 AGLENLGNTCFINAILQCFTHTLPLVQ------ALRSFDH-PRPCDGATEGFCVICALRD 160
AGL NLGNTCF+N+ILQC ++T L LR H R E F +
Sbjct: 268 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYLRDLSHSSRAHTALMEEFAKLIQ--- 324
Query: 161 HIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCC-------- 212
+ +S V+SP + + + F Y Q+DA EFL+ LLD L +
Sbjct: 325 --TIWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVIARPK 382
Query: 213 -----LDSKTKDESLSSQGDNIVQR-------VFGGCLISKLQCCNCGSCSDTYEPLIDL 260
LD DE ++R +F G L S L C +CG CS ++P DL
Sbjct: 383 SNTENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDL 442
Query: 261 SLEIEDVG----SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAF 316
SL I G +L + FTK E + D + K TC +C+ + K+ + + P +
Sbjct: 443 SLPITKRGYPEVTLMDCMRLFTK-EDVLDGDEKPTCCRCRARKRCIKKFSIQRFPKILVL 501
Query: 317 HLKRFKTDGSYVVKIDKHVEFPL-ELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCG 375
HLKRF K+ V FPL +LDL+ + S N V Y+LYA+ H G++ G
Sbjct: 502 HLKRFSESRIRTSKLTAFVNFPLRDLDLREFASENTNHAV---YNLYAVSNHSGTT-MGG 557
Query: 376 HYFSYIRSSPDT--WHRLNDSRVTRVEEEFVLSQDAYILFY 414
HY +Y R SP T WH NDS V+ + V + DAY+LFY
Sbjct: 558 HYTAYCR-SPVTGEWHTFNDSSVSPMSSSQVRTSDAYLLFY 597
>gi|353236807|emb|CCA68794.1| related to UBP8-Ubiquitin-specific protease component of the SAGA
complex [Piriformospora indica DSM 11827]
Length = 587
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/346 (30%), Positives = 155/346 (44%), Gaps = 39/346 (11%)
Query: 103 PTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHI 162
P V G NLG TC+++ ILQ F H L S H G +C+ C L
Sbjct: 193 PCEVRRGFLNLGATCYMSVILQAFLHNPLLRNFFLSDKHNSKLCGKL--YCMCCELDQMF 250
Query: 163 ELSL---------ASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCL 213
+ +G + P L+ S+ Y Q DAHEF +L++L S
Sbjct: 251 ADVFNPSSTQNVDSGAGLSVGPLSLLRTTWQNSNDMAGYAQHDAHEFFITVLNQLHS--- 307
Query: 214 DSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDV-----G 268
+ D + S +V ++F G L S ++C CG + T +P++D+SLE++ V
Sbjct: 308 --GSADATHGSSCTCVVHQIFAGQLQSDVKCGKCGHINPTIDPMLDISLELKGVPNGKMP 365
Query: 269 SLGSALESFTKLEKIEDPETKFTCEKCKEQVS-VEKQLMLDKVPSVAAFHLKRFKTDGSY 327
+L S L FT+ E + P + C C S KQL + K+P V LKRF+ S
Sbjct: 366 TLASCLRRFTEKETL--PANAYVCSNCNSSTSEATKQLSIRKLPPVLCIQLKRFEHKSS- 422
Query: 328 VVKIDKHVEFPLELDLKPYTSGGQNSDVE------------LKYHLYAIVEHMGSSPTCG 375
KID V+FP +++ PYT+ V Y L+A+V H G T G
Sbjct: 423 AAKIDTPVKFPGIINMSPYTTAAIGMQVREGKVPKLDPATTYDYELFAVVNHEGQLNT-G 481
Query: 376 HYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
HY ++ RS + W+R +D +VT L Y+ FY K+ ++
Sbjct: 482 HYTNFARSQ-NEWYRFDDEKVTHTTLRECLQSIPYMCFYVKRNLDY 526
>gi|348512186|ref|XP_003443624.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like
[Oreochromis niloticus]
gi|432928205|ref|XP_004081104.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Oryzias
latipes]
Length = 372
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 169/357 (47%), Gaps = 55/357 (15%)
Query: 92 PVEKHWPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSF-DHPRPCDGATE 150
PV +H+ GL N GNTC+ N++LQ P + + ++ PR +
Sbjct: 33 PVNEHY----------FGLVNFGNTCYCNSVLQALYFCRPFREKILAYRSQPRRKEN--- 79
Query: 151 GFCVICALRDHIELSLASSGK---VLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDR 207
++ L D S+A+ + V+ P+K + L + F Y Q+DAHEFL LL+
Sbjct: 80 ---LLTCLADLFH-SIANQKRKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNT 135
Query: 208 LESCCLDSKTKDES--------LSSQGDN--------IVQRVFGGCLISKLQCCNCGSCS 251
+ + + ++++ L SQ +N V +F G L ++ +C C + S
Sbjct: 136 IADLLQEERKQEKTNGRLANGTLDSQNNNSNATPAPTWVHEIFQGTLTNETRCLTCETIS 195
Query: 252 DTYEPLIDLSLEIEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVP 311
E +DLS+++E S+ L F+ E + E K+ CE+C+ + K++ + K+P
Sbjct: 196 SKDEDFLDLSVDVEQNTSITHCLRGFSNTETL-CSEYKYYCEECRSKQEAHKRMRVKKLP 254
Query: 312 SVAAFHLKRFKT--DGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMG 369
+ A HLKRFK K+ V FPLEL L + + G ++ E Y L A+V H G
Sbjct: 255 MILALHLKRFKYMEQLQRYTKLSYRVVFPLELRL--FNTSGDATNPERLYDLVAVVVHCG 312
Query: 370 SSPTCGHYFSYIRSSPDTWHRLNDSRVTRVE----EEFVL--------SQDAYILFY 414
S P GHY + ++S D W +D V +++ EEF S+ YILFY
Sbjct: 313 SGPNRGHYIAIVKSH-DFWLLFDDDIVEKIDAQAIEEFYGLTSEISKNSESGYILFY 368
>gi|158293588|ref|XP_314931.4| AGAP008805-PA [Anopheles gambiae str. PEST]
gi|157016781|gb|EAA10095.4| AGAP008805-PA [Anopheles gambiae str. PEST]
Length = 634
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 110/375 (29%), Positives = 172/375 (45%), Gaps = 69/375 (18%)
Query: 108 AGLENLGNTCFINAILQ---------CFTHTLPLVQAL--RSFDHPRPCDGATEGFCVIC 156
GL NLGNTCF+N++LQ C+ +T+P ++ + H R + V+
Sbjct: 232 VGLRNLGNTCFMNSVLQSLSNIQEFSCYFNTMPALEMKHKQKAYHSRSMKETMDDVFVVE 291
Query: 157 ALRDHIELSLASSG----KVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLES-- 210
LR + L+L+ G +SP L + + F+ ++Q DAHEFL+ +LDRL +
Sbjct: 292 ELRK-VLLNLSQGGDGSKSAISPECLFLVIWKVVPQFRGHRQHDAHEFLRYMLDRLHTEL 350
Query: 211 ------CCLDSKTKDES-----------LSSQGDN-IVQRVFGGCLISKLQCCNCGSCSD 252
L E L ++G N IV VFGG L S+++C CG S
Sbjct: 351 QQVSFPVELGGPKSGEHKNPYNVSGLSHLQAKGRNSIVTNVFGGVLQSEVRCLICGMESK 410
Query: 253 TYEPLIDLSLEIED-----------------------VGSLGSALESFTKLEKIEDPETK 289
++P +DLSL+I + V + L SFT++E++ + E
Sbjct: 411 KHDPFLDLSLDIPEKYYSKEHGADGTNGADGGGGAAPVCHISDCLSSFTEVEELAETEL- 469
Query: 290 FTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLE-LDLKPYTS 348
+ C CK + K+ + ++P+V H+KRF+ + Y KID + FP+ LD+ +
Sbjct: 470 YYCNSCKCKQKSTKRFWIRRLPNVLCLHIKRFRWNNFYRTKIDLRIAFPINALDMSQFVL 529
Query: 349 GG------QNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEE 402
NS + Y L A++ H G+ +CGHY S+ ++ W ND V V
Sbjct: 530 NNGPETRRSNSSCNI-YDLAAVIVHHGNGSSCGHYTSFAINN-GVWMHFNDHTVKEVSST 587
Query: 403 FVLSQDAYILFYAKQ 417
V YILFY K+
Sbjct: 588 AVAECKPYILFYIKR 602
>gi|410908997|ref|XP_003967977.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Takifugu
rubripes]
gi|47223359|emb|CAG04220.1| unnamed protein product [Tetraodon nigroviridis]
Length = 372
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 169/357 (47%), Gaps = 55/357 (15%)
Query: 92 PVEKHWPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSF-DHPRPCDGATE 150
PV +H+ GL N GNTC+ N++LQ P + + ++ PR +
Sbjct: 33 PVNEHY----------FGLVNFGNTCYCNSVLQALYFCRPFREKILAYRSQPRRKEN--- 79
Query: 151 GFCVICALRDHIELSLASSGK---VLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDR 207
++ L D S+A+ + V+ P+K + L + F Y Q+DAHEFL LL+
Sbjct: 80 ---LLTCLADLFH-SIANQKRKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNT 135
Query: 208 LESCCLDSKTKDES--------LSSQGDN--------IVQRVFGGCLISKLQCCNCGSCS 251
+ + + ++++ L SQ +N V +F G L ++ +C C + S
Sbjct: 136 IADLLQEERKQEKTNGRLANGTLDSQNNNSNATPAPTWVHEIFQGTLTNETRCLTCETIS 195
Query: 252 DTYEPLIDLSLEIEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVP 311
E +DLS+++E S+ L F+ E + E K+ CE+C+ + K++ + K+P
Sbjct: 196 SKDEDFLDLSVDVEQNTSITHCLRGFSNTETL-CSEYKYYCEECRSKQEAHKRMRVKKLP 254
Query: 312 SVAAFHLKRFKT--DGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMG 369
+ A HLKRFK K+ V FPLEL L + + G ++ E Y L A+V H G
Sbjct: 255 MILALHLKRFKYMEQLQRYTKLSYRVVFPLELRL--FNTSGDATNPERLYDLVAVVVHCG 312
Query: 370 SSPTCGHYFSYIRSSPDTWHRLNDSRVTRVE----EEFVL--------SQDAYILFY 414
S P GHY + ++S D W +D V +++ EEF S+ YILFY
Sbjct: 313 SGPNRGHYIAIVKSH-DFWLLFDDDIVEKIDAQAIEEFYGLTSEISKNSESGYILFY 368
>gi|393221330|gb|EJD06815.1| cysteine proteinase [Fomitiporia mediterranea MF3/22]
Length = 506
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 113/336 (33%), Positives = 157/336 (46%), Gaps = 39/336 (11%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL NLG TCF+N ILQ F H L S H E C+ C L D + S
Sbjct: 145 GLLNLGQTCFLNVILQSFLHNPMLRNYFLSDMHNSKACKIKE--CMCCEL-DKL-FSEVY 200
Query: 169 SGKVL--SPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQG 226
SGK + P L+ S Y Q+DAHEF L+ L K+ + S
Sbjct: 201 SGKTVPFGPATLLATTWKASPELAGYSQQDAHEFFISALNHLH------KSAYGNTSISC 254
Query: 227 DNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVG----SLGSALESFTKLEK 282
+ +V VFGG L S C CGS S +P++D+S++++ G +L L FT E
Sbjct: 255 NCVVHAVFGGQLQSDHTCGKCGSTSSKIDPILDISMQLKGNGVEEDTLAECLRRFTHPET 314
Query: 283 IEDPETKFTCEKCKEQV--SVEKQLMLDKVPSVAAFHLKRFKTDG----SYVVKIDKHVE 336
+ TK++C +C Q K+L + K+P V + KRF+ +G + KID HV
Sbjct: 315 M----TKYSCNRCGPQFHQQATKRLSIRKLPPVLSIQFKRFEHEGQNGKATPKKIDTHVR 370
Query: 337 FPLELDLKPYTS------GGQNS-----DVELKYHLYAIVEHMGSSPTCGHYFSYIRSSP 385
P L++ PYT+ GGQ V +Y L+A+V H G T GHY +Y RS
Sbjct: 371 IPATLNMLPYTTIGIKNQGGQKERFLGPGVLYEYDLFAVVNHDGQIDT-GHYTNYARSQ- 428
Query: 386 DTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
D W R +D +V VL Y+ FY K+ ++
Sbjct: 429 DLWFRFDDDKVAHSSLSDVLKSTVYMCFYVKRHLDY 464
>gi|395520835|ref|XP_003764528.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Sarcophilus
harrisii]
Length = 599
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/338 (29%), Positives = 164/338 (48%), Gaps = 43/338 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSF-DHPRPCDGATEGFCVICALRDHIELSLA 167
GL N GNTC+ N++LQ P + + ++ PR + ++ L D S+A
Sbjct: 269 GLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPRKKEN------LLTCLADLFH-SIA 321
Query: 168 SSGK---VLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDE---- 220
+ K V+ P+K + L + F Y Q+DAHEFL LL+ + + + +++
Sbjct: 322 TQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGR 381
Query: 221 ----SLSSQGDN------IVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSL 270
++ S+ +N V +F G L ++ +C C + S E +DLS+++E S+
Sbjct: 382 LPNGNIDSENNNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTSI 441
Query: 271 GSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSY--V 328
L F+ E + E K+ CE+C+ + K++ + K+P + A HLKRFK
Sbjct: 442 THCLRGFSNTETLCS-EYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRY 500
Query: 329 VKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTW 388
K+ V FPLEL L + + G ++ + Y L A+V H GS P GHY + ++S D W
Sbjct: 501 TKLSYRVVFPLELRL--FNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSH-DFW 557
Query: 389 HRLNDSRVTR-----VEEEFVLSQD-------AYILFY 414
+D V + +EE + L+ D YILFY
Sbjct: 558 LLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYILFY 595
>gi|146416419|ref|XP_001484179.1| hypothetical protein PGUG_03560 [Meyerozyma guilliermondii ATCC
6260]
Length = 516
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 109/345 (31%), Positives = 167/345 (48%), Gaps = 42/345 (12%)
Query: 101 IKPTGVGAGLE---NLGNTCFINAILQCFTHTLPLV--QALRSFDHPRPCDGATE----- 150
I P +GL+ NLG+TCF++ ILQ F H PLV Q + H CD E
Sbjct: 177 IPPVAAVSGLKGFVNLGSTCFMSCILQTFIHN-PLVKYQFFNNDLHYFNCDSMQEYHSAN 235
Query: 151 ------GFCVICALRDHIELSLASSGKV--LSPRKLVDNLNYISSFFQRYQQEDAHEFLQ 202
C+ C++ D I + +S + L+ Y + ++++DAHE Q
Sbjct: 236 PNVTENNACITCSI-DVIFRNFYTSTSIEGYGMTNLLMTAWYKNKSLAGFEEQDAHELWQ 294
Query: 203 CLLDRLES---CCLDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLID 259
LL+ L S L ++ ES + I F G L S +QC NC ++T +P+ID
Sbjct: 295 FLLNELHSDHERSLQRSSQHESEQNMCQCITHSTFSGTLASSIQCQNCQETTETVDPMID 354
Query: 260 LSLEI------EDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSV 313
LSLEI + +L L+ FT EK+ + +TC C E+ K L + K+ V
Sbjct: 355 LSLEIGRLKNKQKTANLYDCLDRFTSSEKL---DVMYTCHHCGEKSEATKSLKIKKLAPV 411
Query: 314 AAFHLKRFK----TDGSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMG 369
+ LKRF+ DGS K++ V P+ LD+ YTS + +++ Y L+A+V H+G
Sbjct: 412 LSIQLKRFEHNKSNDGS--SKVETPVSIPIYLDISKYTSDEKATNI---YELFAVVCHVG 466
Query: 370 SSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFY 414
T GHY ++ W + +DS ++ + E V S + Y+LFY
Sbjct: 467 LVNT-GHYIVVVKDGEGRWLKFDDSVISLIAESEVSSMNGYLLFY 510
>gi|385303854|gb|EIF47904.1| ubiquitin carboxyl-terminal hydrolase [Dekkera bruxellensis
AWRI1499]
Length = 375
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/335 (32%), Positives = 165/335 (49%), Gaps = 41/335 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDH------PRPCDGATEG-----FCVICA 157
G N+G+TCF+++ILQ H + S H P+ C G F +
Sbjct: 47 GFINMGSTCFMSSILQAIVHNPFIRDYYLSGSHLDCPRDPKDCISCCVGEIFKDFYXLYK 106
Query: 158 LRDHIEL--SLASSGKVLSPRKLVDN---LNYISSFFQRYQQEDAHEFLQCLLDRLESCC 212
+ ++L GK+ + ++ N +N+ + + D L DR +
Sbjct: 107 VPLXMDLVQCYQLHGKLENLLLVILNKMHMNFWQFLIHQLHKNDTKR----LHDRESTPA 162
Query: 213 LDSKTKDESLSS----QGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEI---- 264
LDS + L+S + D I R F G L S L C +CG+ T +P++DLSLEI
Sbjct: 163 LDSDGDKKDLASNPLFKCDCITHRTFAGELQSTLTCADCGNKHVTXDPMLDLSLEIRERN 222
Query: 265 EDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTD 324
E + +L L+ FTK EK++ F+C +C ++ V KQL + K+P LKRF+
Sbjct: 223 ESLKTLDXCLQKFTKPEKLD---ILFSCPRCAKKTGVTKQLQIRKLPPTLCIQLKRFE-H 278
Query: 325 GSYVVKIDKHVEFPLELDLKPYT-----SGGQNSDVELKYHLYAIVEHMGSSPTCGHYFS 379
+ K++ HV+ PL LD+ YT +G SD+ Y LYA+V H+G+ T GHY S
Sbjct: 279 VNVSTKLEAHVDIPLILDMSKYTLDGKRNGDSGSDL---YELYAVVYHIGNVNT-GHYIS 334
Query: 380 YIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFY 414
++ W + +DS V RV E+ VL+ AY+LFY
Sbjct: 335 LVKDRDGMWFKFDDSHVVRVSEKDVLASQAYLLFY 369
>gi|397465443|ref|XP_003804505.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Pan paniscus]
Length = 403
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 140/264 (53%), Gaps = 13/264 (4%)
Query: 158 LRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKT 217
++ HI +L G V+ P + +++ F R +QEDAHEFL ++ ++ CL
Sbjct: 1 MKAHITRALYRPGHVIQPSQA------LAAGFHRGKQEDAHEFLMFTVEAMKKACLPGH- 53
Query: 218 KDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESF 277
K S+ ++ ++FGG S+++C +C SDT++P +D++L+I+ S+ ALE
Sbjct: 54 KQVDHHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDITLDIQAAQSVKQALEQL 113
Query: 278 TKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVKIDKHVEF 337
K E++ + E + C C ++ K L L L RF K+ ++V++
Sbjct: 114 VKPEEL-NGENAYHCGLCLQKAPASKTLTLHTSAKFLILVLNRF--SNVTCNKLARNVQY 170
Query: 338 PLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVT 397
++PY S Q S L Y LYA++ H G S GHYFSY+++ W++++++ VT
Sbjct: 171 RECFYMQPYMS--QQSTCPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDEADVT 228
Query: 398 RVEEEFVLSQDAYILFYAKQGTEW 421
VLSQ AY+LFY Q +EW
Sbjct: 229 ASGITSVLSQQAYVLFYI-QKSEW 251
>gi|345319054|ref|XP_001519444.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12
[Ornithorhynchus anatinus]
Length = 368
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 106/355 (29%), Positives = 167/355 (47%), Gaps = 53/355 (14%)
Query: 92 PVEKHWPIQIKPTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSF-DHPRPCDGATE 150
PV +H+ GL N GNTC+ N++LQ P + + ++ PR +
Sbjct: 31 PVNEHY----------FGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPRKKEN--- 77
Query: 151 GFCVICALRDHIELSLASSGK---VLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDR 207
++ L D S+A+ K V+ P+K + L + F Y Q+DAHEFL LL+
Sbjct: 78 ---LLTCLADLFH-SIATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNT 133
Query: 208 LESCCLDSKTKDE--------SLSSQGDN------IVQRVFGGCLISKLQCCNCGSCSDT 253
+ + + +++ +L S+ +N V +F G L ++ +C C + S
Sbjct: 134 VADILQEERKQEKQNGRLPNGNLDSENNNSPPDPTWVHEIFQGTLTNETRCLTCETISSK 193
Query: 254 YEPLIDLSLEIEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSV 313
E +DLS+++E S+ L F+ E + E K+ CE+C+ + K++ + K+P +
Sbjct: 194 DEDFLDLSVDVEQNTSITHCLRGFSNTETL-CSEYKYYCEECRSKQEAHKRMKVKKLPMI 252
Query: 314 AAFHLKRFKTDGSY--VVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSS 371
A HLKRFK K+ V FPLEL L + G N D Y L A+V H GS
Sbjct: 253 LALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGGATNPD--RMYDLVAVVVHCGSG 310
Query: 372 PTCGHYFSYIRSSPDTWHRLNDSRVTR-----VEEEFVLSQD-------AYILFY 414
P GHY + ++S D W +D V + +EE + L+ D YILFY
Sbjct: 311 PNRGHYIAIVKSH-DFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYILFY 364
>gi|406696946|gb|EKD00217.1| ubiquitin thiolesterase 9 [Trichosporon asahii var. asahii CBS
8904]
Length = 1145
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 144/280 (51%), Gaps = 25/280 (8%)
Query: 172 VLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRL--ESCCLDSKTKDES-----LSS 224
V+ P ++ + F Q+DAHEFL +L++L E +D+K K E +
Sbjct: 264 VVRPEDVLRTVRRTHQLFAGQGQQDAHEFLGFILNQLSEEVEQMDAKLKREGKEVVDIKE 323
Query: 225 QGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIE 284
G +Q +F G L+++ +C NC + S E +DLS++IE SL S L F+ E +
Sbjct: 324 HGRTFIQNLFHGVLVNETRCLNCETTSSREESFLDLSIDIEQHSSLTSCLRQFSDSEMLC 383
Query: 285 DPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDG-SYVVKIDKHVEFPLELDL 343
KF CE C V E+++ + ++P++ HLKRF+ D + K+ V FPL+L +
Sbjct: 384 S-TNKFYCETCCGLVEAERRMRIKELPNILGLHLKRFRQDDMGRLHKLFYRVTFPLQLRV 442
Query: 344 KPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEF 403
T + D E Y L+A+V H+G++PT GHY + +RS P W +D + +EE
Sbjct: 443 PCTTE--ETEDAERLYELFAVVVHIGNTPTHGHYVTIVRSQPGQWVMCDDENIEPIEESD 500
Query: 404 V-------LSQDAYILFYAKQGTEWVSSLLEAESIGMNAD 436
+ ++ Y+LFY ++ L+ +S+G+ D
Sbjct: 501 LANYFGDNITGAGYVLFYQ-------AANLDLKSLGLKKD 533
>gi|448123192|ref|XP_004204633.1| Piso0_000492 [Millerozyma farinosa CBS 7064]
gi|448125473|ref|XP_004205191.1| Piso0_000492 [Millerozyma farinosa CBS 7064]
gi|358249824|emb|CCE72890.1| Piso0_000492 [Millerozyma farinosa CBS 7064]
gi|358350172|emb|CCE73451.1| Piso0_000492 [Millerozyma farinosa CBS 7064]
Length = 682
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 109/387 (28%), Positives = 174/387 (44%), Gaps = 50/387 (12%)
Query: 66 EEIYRDTRPISSSYG---RYNWGSSLLSRPVEKHWP--IQIKPTGVGAGLENLGNTCFIN 120
E+ + + P+S+ YG + N + S + K+W + KP AGL N G TC++N
Sbjct: 286 EDAHTEGFPVSAFYGINEKENDRGANGSNRIYKNWRELSKRKP----AGLLNHGVTCYMN 341
Query: 121 AILQCFTHTLPLVQALRSFDHPRPCDG-ATEGFCVICALRDHIELSLASSG--------- 170
+ +Q H L L + + + + AL L G
Sbjct: 342 SAIQALVHIAALQHYLNEINAGKHNNTLKPRSVSHVLALLSRKMWGLDDEGDGRSNPRFP 401
Query: 171 KVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDNIV 230
K ++P+K++ L I+ +QQED+HE+ L+ RL+ DS K L++ +I+
Sbjct: 402 KYINPKKIIQRLPDINCMMSEWQQEDSHEYFMSLISRLQE---DSTPKGSKLNT---SII 455
Query: 231 QRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEI----------------EDVGSLGSAL 274
+FGG L + C NC SDT + DLSL S+ ++
Sbjct: 456 YDIFGGLLHQSVTCRNCNHVSDTKQEFYDLSLGFTRKRHQGDDPDNENTDNQKYSIEKSI 515
Query: 275 ESFTKLEKIE----DPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVK 330
+ F E I+ D + + CEKCK + + K +D+ P A HLKRFK +G+ K
Sbjct: 516 KDFFSKESIKLDRKDKSSGYYCEKCKTRSNAFKVSTIDRSPEALAIHLKRFKFNGNSSSK 575
Query: 331 IDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHR 390
+ + + + LDL YTS S KY L +++ H G S + GHY ++ +TW
Sbjct: 576 VKQPIHYSKYLDLSRYTS----SVDPTKYQLISVITHEGRSISSGHYVAHCLQPDNTWST 631
Query: 391 LNDSRVTRVEEEFVLSQ-DAYILFYAK 416
+D + ++ E LS AY+L Y K
Sbjct: 632 YDDEYINKINEREALSDPSAYVLLYTK 658
>gi|224093752|ref|XP_002309976.1| predicted protein [Populus trichocarpa]
gi|222852879|gb|EEE90426.1| predicted protein [Populus trichocarpa]
Length = 370
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/351 (30%), Positives = 160/351 (45%), Gaps = 49/351 (13%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLV-QALRSFDHPRPCDGATEGFCVICA-LRDHIELSL 166
GLEN GNTC+ N++LQ P Q L + + + A E A L I
Sbjct: 24 GLENFGNTCYCNSVLQALYFCAPFREQLLEYYANSKNIGDAEENLLTCLADLFTQISSQK 83
Query: 167 ASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRL---------------ESC 211
+G V++P++ V L + F+ Y +DAHEFL LL+ L E+
Sbjct: 84 KKTG-VIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILEKEAQAVKSETETS 142
Query: 212 CLDSKTKDESLSSQGDNI--------VQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLE 263
KT + +Q + + V + F G L ++ +C C + + E DLSL+
Sbjct: 143 SPPEKTANGPKHAQANGVSKEPLVTWVHKNFQGILTNETRCLQCETVTARDETFFDLSLD 202
Query: 264 IEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKT 323
IE S+ S L++F+ E + + E KF C+KC +K++ + K P + HLKRFK
Sbjct: 203 IEQNSSITSCLKNFSSTETL-NAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKY 261
Query: 324 D---GSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSY 380
G Y K+ V FPLEL L D +++Y L+A+V H+GS P GHY S
Sbjct: 262 IEQLGRY-KKLSYRVVFPLELKLSNTV-----EDADIEYSLFAVVVHVGSGPNHGHYVSL 315
Query: 381 IRSSPDTWHRLNDSRVTRVEEEFVL------------SQDAYILFYAKQGT 419
++S + W +D V ++E V + YILFY G
Sbjct: 316 VKSH-NHWLFFDDENVEMIDESAVQTFFGSAQEYSSNTDHGYILFYESIGA 365
>gi|307173655|gb|EFN64504.1| Ubiquitin carboxyl-terminal hydrolase 22 [Camponotus floridanus]
Length = 507
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/360 (29%), Positives = 166/360 (46%), Gaps = 48/360 (13%)
Query: 101 IKPTGVGA-GLENLGNTCFINAILQCFTHTLPLVQALRSFDH---PRPCDGATEGFCVIC 156
++ T +G GL NLG TCF+N I+Q HT PL++ D P+P C++C
Sbjct: 151 VENTTIGLRGLINLGQTCFMNCIVQVLIHT-PLLRDYFLADRHHCPQPSR------CLVC 203
Query: 157 ALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSK 216
+ + + + L+ KL+ + Y+Q+DAHEF LD L C +
Sbjct: 204 EVSHLFQEFYSGNKAPLTLHKLLHLIWTHVKHLAGYEQQDAHEFFIATLDVLHRHCEAAP 263
Query: 217 TKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVG-------- 268
+ + I+ ++F G L S + C C S T +P D+SL++
Sbjct: 264 ILVKDNPHHCNCIIDQIFTGGLQSDVVCQVCNGVSTTIDPFWDISLDLGPAADSSGSDKS 323
Query: 269 ----SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTD 324
SL LE FT+ E + K C C+ KQL + ++P VA+FHLKRF+
Sbjct: 324 GLPTSLLDCLERFTRAEHL-GSTVKIKCSNCETYQESTKQLTMKQLPIVASFHLKRFEHS 382
Query: 325 G-----SYVVKIDKHVEFPLELDLKPYTS----GGQNSDV--------------ELKYHL 361
KI + FP +LD+ P+ S G NS + + +Y L
Sbjct: 383 SIQDKICKKEKISTFISFPEQLDMTPFMSHKRNGNNNSAMIDGLFKNGENLTFSDNRYSL 442
Query: 362 YAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYAKQGTEW 421
+A++ H GS T GHY ++IR D W + +D +T+ + VL+ + Y+LFY KQ E+
Sbjct: 443 FAVINHKGSLET-GHYTAFIRQQRDQWFKCDDHLITKARLKDVLTSEGYLLFYHKQILEY 501
>gi|145353130|ref|XP_001420878.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581114|gb|ABO99171.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 334
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/334 (29%), Positives = 157/334 (47%), Gaps = 26/334 (7%)
Query: 103 PTGVGAGLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHI 162
P G+ L N+GNTCF+++ILQ T P+V+ +H R G CV CA +++
Sbjct: 5 PVGLRGSL-NMGNTCFLSSILQTLVSTAPVVEYFLRENHARRAGGCEIDDCVACAFDEYV 63
Query: 163 -------ELSLASSGKVLSPRKLVDNLNYISSF----FQRYQQEDAHEFLQCLLDRLESC 211
++ +S+ S + L Y + QQ+DAHEF L +
Sbjct: 64 SKAYDDARVATSSAPSTASTALVAGELLYAWWVNEPSMAKEQQQDAHEFFLSFLSVAHAN 123
Query: 212 CLDS----KTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDV 267
L + K ++ + + F G L S + C +CG+ + T E +SL++
Sbjct: 124 VLGRSIRPRKKRAEDAATCECVFHTAFAGVLRSDIACASCGASTTTREATTGVSLDVPPA 183
Query: 268 G-----SLGSALESFTKLEKIEDPETKFTCEKCKE-QVSVEKQLMLDKVPSVAAFHLKRF 321
SL L +FT +E IE+ + C C S KQ ++VP + FH KRF
Sbjct: 184 TKSSRVSLMECLSNFTAMETIENTSRR-VCSACAVVSESHGKQTRFERVPKILNFHFKRF 242
Query: 322 KTDGSYVVKIDKHVEFPLELDLKPYTSGG-QNSDVELKYHLYAIVEHMGSSPTCGHYFSY 380
+ D + K D HV+FP +LD+ PY + + ++ + Y LY++V+H G GHY +Y
Sbjct: 243 EGDFKSMRKNDIHVDFPFDLDMSPYHAHDCKETNHDAAYELYSVVQHSGVLEG-GHYVAY 301
Query: 381 IRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFY 414
+R W +D+ V +E V S A++LFY
Sbjct: 302 VRRD-GAWFLCDDAVVREADENEVKSSQAFMLFY 334
>gi|296419785|ref|XP_002839472.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295635633|emb|CAZ83663.1| unnamed protein product [Tuber melanosporum]
Length = 524
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/340 (30%), Positives = 161/340 (47%), Gaps = 43/340 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHI-ELSLA 167
G N+G+TCF++ +LQ H PLV+ D +P + A + C+ CA+ + E
Sbjct: 188 GFLNMGSTCFMSVVLQSLIHN-PLVRNFYLADGHKPKECA-QANCMSCAMEEVFSEFFAT 245
Query: 168 SSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGD 227
P L+ YQQ+DAHE+LQ LL++L + + ++ + Q
Sbjct: 246 DKTDGFGPVNLLTTSWKCEQTLAGYQQQDAHEYLQFLLNQLHA---TNGGNTDTKTEQCK 302
Query: 228 NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIED----------------VGSLG 271
I+ R F G L S + C C + + +P++DLSL++ + +L
Sbjct: 303 CIIHRAFYGNLQSDVTCEGCQNVTTAVDPVMDLSLDLRKKDKRKLATPKTEGDGAMQTLQ 362
Query: 272 SALESFTKLEKIEDPETKFTCEKCK-EQVSVEKQLMLDKVPSVAAFHLKRFKTDGSYVVK 330
LE FT EK+ E + CE C Q KQL + ++P V LKRF+ + K
Sbjct: 363 ECLERFTSTEKLGMNE--YNCENCSGHQEVATKQLTVKRLPPVLCIQLKRFEHGSTKSSK 420
Query: 331 IDKHVEFPLELDLKPYTSGGQ------NSDVELK----------YHLYAIVEHMGSSPTC 374
ID + FP++LD+ PYT+ + ++D K Y L ++V H G +
Sbjct: 421 IDTKIRFPMQLDMAPYTTRAKRKAKDGSTDCGPKSSLKGHGPYLYDLLSVVVHTGQINS- 479
Query: 375 GHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFY 414
GHY ++ R + W R +DS VT E+ VLS AY+LFY
Sbjct: 480 GHYINFSREN-GQWFRFDDSVVTLATEKDVLSAKAYLLFY 518
>gi|168025346|ref|XP_001765195.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683514|gb|EDQ69923.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 371
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 109/347 (31%), Positives = 160/347 (46%), Gaps = 47/347 (13%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLV-QALRSFDHPRPCDGATEGFCV-ICALRDHIELSL 166
GLEN GNTC+ N++LQ +P Q L +P A E + L I
Sbjct: 24 GLENFGNTCYCNSVLQALYFCVPFRDQLLEHCGQSKPVAEAEENLLTCLSELFSQINSQK 83
Query: 167 ASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRL-------------ESCCL 213
+G V++P++ V + + F+ Y +DAHEFL LL+ L S C
Sbjct: 84 KKTG-VIAPKRFVQRVKKQNELFRSYMHQDAHEFLNFLLNELVDILEREAKAAKSNSGCE 142
Query: 214 DSKTK---DESLSSQGDNI--------VQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSL 262
S K + S+S + V ++F G L ++ +C C + + E +DLSL
Sbjct: 143 TSPGKVVGNGSVSGLANGTHKEAVVTWVHKIFQGILTNETRCLRCETITARDETFLDLSL 202
Query: 263 EIEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK 322
+IE S+ S L +F+ E + + E KF C+KC +K++ + P + A HLKRFK
Sbjct: 203 DIEQNSSITSCLRNFSSTETL-NAEDKFFCDKCCSLQEAQKRMKIKSAPRILALHLKRFK 261
Query: 323 TD---GSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFS 379
G Y K+ V FPLEL L T S+ E Y L+A+V H+GS P GHY S
Sbjct: 262 YIEQLGRY-KKLSYRVVFPLELKLCNTTDDAPGSEAE--YSLFAVVVHVGSGPNHGHYVS 318
Query: 380 YIRSSPDTWHRLNDSRVTRVEEEFVL------------SQDAYILFY 414
++S + W +D V ++E V + YILFY
Sbjct: 319 LVKSH-NHWLFFDDENVEIIDESIVQTFFGSTQEYSNNTDHGYILFY 364
>gi|168025514|ref|XP_001765279.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683598|gb|EDQ70007.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 373
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 109/347 (31%), Positives = 160/347 (46%), Gaps = 47/347 (13%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLV-QALRSFDHPRPCDGATEGFCV-ICALRDHIELSL 166
GLEN GNTC+ N++LQ +P Q L +P A E + L I
Sbjct: 26 GLENFGNTCYCNSVLQALYFCVPFRDQLLEHCGQSKPVAEAEENLLTCLSELFSQINSQK 85
Query: 167 ASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRL-------------ESCCL 213
+G V++P++ V + + F+ Y +DAHEFL LL+ L S C
Sbjct: 86 KKTG-VIAPKRFVQRVKKQNELFRSYMHQDAHEFLNFLLNELVDILEREAKAAKSNSGCE 144
Query: 214 DSKTK---DESLSSQGDNI--------VQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSL 262
S K + S+S + V ++F G L ++ +C C + + E +DLSL
Sbjct: 145 TSPGKVVGNGSVSGLANGTHKEAVVTWVHKIFQGILTNETRCLRCETITARDETFLDLSL 204
Query: 263 EIEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK 322
+IE S+ S L +F+ E + + E KF C+KC +K++ + P + A HLKRFK
Sbjct: 205 DIEQNSSITSCLRNFSSTETL-NAEDKFFCDKCCSLQEAQKRMKIKSAPRILALHLKRFK 263
Query: 323 TD---GSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFS 379
G Y K+ V FPLEL L T S+ E Y L+A+V H+GS P GHY S
Sbjct: 264 YIEQLGRY-KKLSYRVVFPLELKLCNTTDDAPGSEAE--YSLFAVVVHVGSGPNHGHYVS 320
Query: 380 YIRSSPDTWHRLNDSRVTRVEEEFVL------------SQDAYILFY 414
++S + W +D V ++E V + YILFY
Sbjct: 321 LVKSH-NHWLFFDDENVEIIDESIVQTFFGSTQEYSNNTDHGYILFY 366
>gi|302795107|ref|XP_002979317.1| hypothetical protein SELMODRAFT_153173 [Selaginella moellendorffii]
gi|302813882|ref|XP_002988626.1| hypothetical protein SELMODRAFT_128261 [Selaginella moellendorffii]
gi|300143733|gb|EFJ10422.1| hypothetical protein SELMODRAFT_128261 [Selaginella moellendorffii]
gi|300153085|gb|EFJ19725.1| hypothetical protein SELMODRAFT_153173 [Selaginella moellendorffii]
Length = 369
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/344 (31%), Positives = 157/344 (45%), Gaps = 44/344 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICA--LRDHIELSL 166
GLEN GNTC+ N++LQ +P L + G E + C L I
Sbjct: 24 GLENFGNTCYCNSVLQALYFCVPFRDQLLEYYSRTKSSGEPEENLLTCLADLFSQINSQK 83
Query: 167 ASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLD-------------RLESCCL 213
+G V++P++ V + + F+ Y +DAHEFL LL+ R S L
Sbjct: 84 KKTG-VIAPKRFVQRVKKQNELFRSYMHQDAHEFLNFLLNELVETLEKEAKSGRTASGNL 142
Query: 214 DSKTKDESLSSQGD--------NIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIE 265
K E+ + G V ++F G L ++ +C C + + E +DLSL+IE
Sbjct: 143 KPAEKKENGVANGTAADQDHPLTWVHKIFQGFLTNETRCLRCETITARDEKFLDLSLDIE 202
Query: 266 DVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTD- 324
S+ S L +F+ E + + E KF C+KC +K++ + P + A HLKRFK
Sbjct: 203 QNSSITSCLRNFSSTETL-NAEDKFFCDKCCSLQEAQKRMKIKTPPRILALHLKRFKYIE 261
Query: 325 --GSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIR 382
G Y K+ V FPLEL L T S+ E Y L+A+V H+GS P GHY S ++
Sbjct: 262 QLGRY-KKLSYRVVFPLELKLCNTTDDAPGSESE--YSLFAVVVHVGSGPNHGHYVSLVK 318
Query: 383 SSPDTWHRLNDSRVTRVEEEFVL------------SQDAYILFY 414
S W +D V ++E +V + YILFY
Sbjct: 319 SHSH-WLFFDDENVEIIDETYVQTFFGSTQEYSNNTDHGYILFY 361
>gi|254577285|ref|XP_002494629.1| ZYRO0A05962p [Zygosaccharomyces rouxii]
gi|238937518|emb|CAR25696.1| ZYRO0A05962p [Zygosaccharomyces rouxii]
Length = 465
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/329 (31%), Positives = 165/329 (50%), Gaps = 28/329 (8%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICAL-------RDH 161
GL N+G+TCF+++I+QC H Q + H + C C+ CAL H
Sbjct: 138 GLLNMGSTCFMSSIVQCLIHNPYFFQFSINQLHSQRCPLQDPLSCISCALDRMVWEFYGH 197
Query: 162 IELSLASSGKVLSPRKLVDNLNYISSF---------FQRYQQEDAHEFLQCLLDRLESCC 212
EL + R + +I F Y Q+DAHE+ Q LL++L +
Sbjct: 198 PELIKNGEDDSNNSRTSDEYAGFIGLFVSSWKINENLAGYFQQDAHEYWQFLLNQLHNDY 257
Query: 213 LDSKTK--DES-LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTY-EPLIDLSLEIEDVG 268
+ S K DE+ + D I F G L S + C C S T +P +DLSL+I+D
Sbjct: 258 MVSHNKSPDETNFAELCDCIAHSTFQGSLKSSIVCPECKMDSKTTKDPFMDLSLDIKDKS 317
Query: 269 SLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK--TDGS 326
+L L+SF K+E++ D + C++C + K+L++ K+P+V LKRF+ +G+
Sbjct: 318 NLYECLDSFHKMEQLHD--FNYHCDRCNTTQNAIKRLIIHKLPAVLVLQLKRFEHHLNGN 375
Query: 327 YVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPD 386
K++ VEFPL L+++ Y G D+ + L I+ H G+ GHY ++ + +
Sbjct: 376 -SAKLNDIVEFPLFLNMRNYCDGDDVPDI--IFELIGIIAHRGTVNE-GHYIAFTKVTTG 431
Query: 387 TWHRLNDSRVTRVEEEFVLSQDAYILFYA 415
W + NDS V+ + EE +L + AY+LFY
Sbjct: 432 HWFKFNDSMVSSITEEELLQEQAYLLFYV 460
>gi|326924494|ref|XP_003208462.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Meleagris
gallopavo]
Length = 414
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 163/337 (48%), Gaps = 42/337 (12%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFD-HPRPCDGATEGFCVICALRDHIELSLA 167
GL N GNTC+ N++LQ P + + ++ PR + ++ L D S+A
Sbjct: 85 GLVNFGNTCYCNSVLQALYFCRPFREKVLAYKVQPRKKES------LLTCLSDLFN-SIA 137
Query: 168 SSGK---VLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES--- 221
+ K V+ P+K + L + F Y Q+DAHEFL LL+ + + K +++
Sbjct: 138 TQKKKVGVIPPKKFISRLRKENELFDNYMQQDAHEFLNYLLNTIADLLQEEKKQEKQNGK 197
Query: 222 ------LSSQGDNI----VQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLG 271
S +GD V +F G L ++ +C NC + S E +DLS+++E S+
Sbjct: 198 LQNGSIESEEGDKTDLTWVHEIFQGTLTNETRCLNCEAVSSKDEDFLDLSVDVEQNTSIT 257
Query: 272 SALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTDGSY--VV 329
L F+ E + E K+ CE+C+ + +K++ + K+P + A HLKRFK
Sbjct: 258 HCLRGFSNTETL-CSEYKYYCEQCRSKQEAQKRMRVKKLPMILALHLKRFKYMDQLHRYT 316
Query: 330 KIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWH 389
K+ V FPLEL L + + G ++ + Y L A+V H GS P GHY + ++S W
Sbjct: 317 KLSYRVVFPLELRL--FNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYITIVKSH-GFWL 373
Query: 390 RLNDSRVTR-----VEEEFVLSQD-------AYILFY 414
+D V + +EE + L+ D YILFY
Sbjct: 374 LFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYILFY 410
>gi|366989503|ref|XP_003674519.1| hypothetical protein NCAS_0B00580 [Naumovozyma castellii CBS 4309]
gi|342300383|emb|CCC68142.1| hypothetical protein NCAS_0B00580 [Naumovozyma castellii CBS 4309]
Length = 466
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/332 (31%), Positives = 166/332 (50%), Gaps = 34/332 (10%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
GL N+G+TCF+++ILQ H +V S H C C+ CAL D + +
Sbjct: 139 GLVNMGSTCFMSSILQALIHNPYIVNYSMSQTHFVNCSIKNSSLCMSCAL-DAMIIEFYG 197
Query: 169 SGKV------------------LSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLES 210
K+ + L+ I+ F Y Q+DAHEFLQ L++L
Sbjct: 198 QSKLQPISSSSSSSSSSSSSSPSAFISLLTCSLKINENFAGYSQQDAHEFLQYFLNQLHQ 257
Query: 211 CCLDSKTKDESLSSQGDN---IVQRVFGGCLISKLQCCNCGSCSDTY-EPLIDLSLEIED 266
D K +D S + Q +N + +F G L S + C C + S T +P +DLSL+I+D
Sbjct: 258 ---DYK-RDSSHNEQENNCPCVAHSIFQGELKSSIVCPECQNDSKTIIDPFMDLSLDIKD 313
Query: 267 VGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFK--TD 324
L L+SF K EK+ D + C +C + KQ ++K+P + LKRF+ +
Sbjct: 314 KTDLYQCLDSFHKKEKLHD--FNYHCSRCNTSLDPIKQFTINKLPPMLVLQLKRFEHFVN 371
Query: 325 GSYVVKIDKHVEFPLELDLKPYTSGGQNSDV-ELKYHLYAIVEHMGSSPTCGHYFSYIRS 383
G+ V K+++ V++PL L+++ Y N + ++ Y L I+ H+GS GHY ++
Sbjct: 372 GTNV-KLNEFVQYPLYLNMRDYCDRNTNQETPDIIYELTGILSHIGSINE-GHYVVVLKI 429
Query: 384 SPDTWHRLNDSRVTRVEEEFVLSQDAYILFYA 415
+ W + NDS ++ ++E+ L Q AY+LFY
Sbjct: 430 NDGRWFKFNDSMISVIKEDEALKQQAYLLFYT 461
>gi|21593319|gb|AAM65268.1| ubiquitin-specific protease 4 (UBP4) [Arabidopsis thaliana]
Length = 365
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/350 (30%), Positives = 161/350 (46%), Gaps = 48/350 (13%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
G EN GNTC+ N++LQ P + L D + L I
Sbjct: 24 GFENFGNTCYCNSVLQALYFCAPFREQLLEHYANNKADAEENLLTCLADLFSQISSQKKK 83
Query: 169 SGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTK----DESLSS 224
+G V++P++ V L + F+ Y +DAHEFL LL+ L L+ +T+ D SS
Sbjct: 84 TG-VIAPKRFVQRLKKQNELFRSYMHQDAHEFLNYLLNELVEI-LEKETQATKADNETSS 141
Query: 225 QGDNI--------------------VQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEI 264
+ I V ++F G L ++ +C C + + E +DLSL+I
Sbjct: 142 SPEKIANVLKAPLANGVHKEPIVTWVHKIFKGILTNETRCLRCETVTARDETFLDLSLDI 201
Query: 265 EDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTD 324
E S+ S L++F+ E + E KF C+KC +K++ + K P + HLKRFK
Sbjct: 202 EQNSSITSCLKNFSSTETLH-AEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYM 260
Query: 325 ---GSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYI 381
G Y K+ V FPLEL L S + V+++Y L+A+V H+GS P GHY S +
Sbjct: 261 EQLGRY-KKLSYRVVFPLELKL----SNTVDEYVDIEYSLFAVVVHVGSGPNHGHYVSLV 315
Query: 382 RSSPDTWHRLNDSRVTRVEEE-----FVLSQD-------AYILFYAKQGT 419
+S + W +D V +E+ F SQ+ YIL Y GT
Sbjct: 316 KSH-NHWLFFDDESVEIIEKSAVQTFFGSSQEYSSNTDHGYILLYESLGT 364
>gi|320163839|gb|EFW40738.1| ubiquitin carboxyl-terminal hydrolase [Capsaspora owczarzaki ATCC
30864]
Length = 655
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 106/379 (27%), Positives = 158/379 (41%), Gaps = 79/379 (20%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPR------------PCDGA-------- 148
GL NLGNTCF+N ILQ F H L + H P D A
Sbjct: 287 GLNNLGNTCFMNCILQSFIHNPLLRNYFLADQHTEETCHIQLGKGLPPVDTAKGVQPHNH 346
Query: 149 ---------TEGFCVICALRDHIELSLASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHE 199
++ C+ C + + + + +P + + ++ + Y+Q+DAHE
Sbjct: 347 HHHHHHQSGSDSLCMACEMDQLLHRFFSGETQPHTPYQFLHSVWKHAKHLAGYEQQDAHE 406
Query: 200 FLQCLLDRLESCCLDSKTKDESLSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLID 259
F LD + + C + I+ RVF G L S L C CGS S T +P D
Sbjct: 407 FFIATLDAMHTHCRGTLLNCHC-------IIHRVFTGALQSDLTCLRCGSVSSTVDPFWD 459
Query: 260 LSLEIE------------DVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLML 307
+SL++ SL L F + E++ + + +C CK KQL +
Sbjct: 460 ISLDLRHHKGATGTPEELQPNSLEQCLHRFIRPERLTE---QISCGNCKTHQDCIKQLTI 516
Query: 308 DKVPSVAAFHLKRFKTDGSYVVKIDKHVEFPLELDLKPYTSGG---QNSDVEL------- 357
+P V HLKRF+ + KID ++EFP LD+ PY S QN ++ +
Sbjct: 517 KSLPVVVCCHLKRFE-HATRSFKIDSYIEFPAHLDMSPYLSASLQRQNGNIPVVPPSPRE 575
Query: 358 ---------------KYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEE 402
Y L+A+V H GS GHY Y+R + W +D+ +T+V+ E
Sbjct: 576 EAPILNASPDFGGNAMYSLFAVVNHRGSIDH-GHYTCYVRHN-SRWFLCDDAWITQVDIE 633
Query: 403 FVLSQDAYILFYAKQGTEW 421
V Y+LFY K E+
Sbjct: 634 EVRESQGYLLFYIKDEMEY 652
>gi|374109329|gb|AEY98235.1| FAFR551Wp [Ashbya gossypii FDAG1]
Length = 469
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 176/357 (49%), Gaps = 41/357 (11%)
Query: 95 KHWPIQIKPTGVGA--------GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCD 146
KHW ++ + V A GL N+G+TCF+++++Q F H ++Q + H CD
Sbjct: 116 KHWNEVLRRSSVPAPHRGEGLLGLVNMGSTCFMSSVIQTFLHLPHVLQYMLERLHYATCD 175
Query: 147 GATEGFCVICALRDHI---------ELSLASSGKVLSPRKLVDNLNY------------- 184
C+ CA+ + + E + +G S + L +L+
Sbjct: 176 VQDSLSCISCAVDEIVANLYGQVKEEAASGVAGPGASTQALSQSLSKQQQGFINLLTCSW 235
Query: 185 -ISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDESLSSQGDNIVQRVFGGCLISKLQ 243
I+ Y Q+DAHEF Q LL++L + + S+ G I+ +F G L S +
Sbjct: 236 KINRNLAGYSQQDAHEFWQFLLNQLHTDYIRIHGPPSKKSACG-CILHMLFQGYLESSIV 294
Query: 244 CCNC-GSCSDTYEPLIDLSLEIEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVE 302
C C G+ T +P++DLSL I++ +L L+SF + E + D + C+ C +
Sbjct: 295 CSECHGNNKTTVDPIMDLSLGIQNKSTLHECLDSFHRRESLTD--FNYCCKNCMSTSNPI 352
Query: 303 KQLMLDKVPSVAAFHLKRFK--TDGSYVVKIDKHVEFPLELDLKPYTS--GGQNSDVELK 358
+QL + K+P V LKRF+ +G+ VKI+ ++ FPL L++K Y Q+ +
Sbjct: 353 RQLSMAKLPPVLMLQLKRFEHLINGT-SVKINDYISFPLHLNMKDYCKPMDDQHPVPNMT 411
Query: 359 YHLYAIVEHMGSSPTCGHYFSYIRSSPDTWHRLNDSRVTRVEEEFVLSQDAYILFYA 415
+ L AI+ H G+ GHY + R + D W + NDS VT + EE +L + AY+L+Y
Sbjct: 412 FKLSAIISHQGTVDK-GHYTTICRINGDVWAKFNDSMVTLISEEDMLKEQAYLLYYV 467
>gi|225468498|ref|XP_002270407.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Vitis vinifera]
Length = 369
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/353 (30%), Positives = 169/353 (47%), Gaps = 53/353 (15%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLV-QALRSFDHPRPCDGATEGFCVICALRDHIELSLA 167
GLEN GNTC+ N++LQ +P Q L + + + A E ++ L D + + ++
Sbjct: 24 GLENFGNTCYCNSVLQALYFCVPFREQLLEYYTNNKNLADAEEN--LLTCLAD-LFMQIS 80
Query: 168 SSGK---VLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRL---------------E 209
S K V++P++ V L + F+ Y +DAHEFL LL+ L E
Sbjct: 81 SQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILEKEASASKSDPE 140
Query: 210 SCCLDSKTKDESLSSQGDNI--------VQRVFGGCLISKLQCCNCGSCSDTYEPLIDLS 261
+ KT + ++Q + + V + F G L ++ +C C + + E +DLS
Sbjct: 141 TSSPPEKTANGPKTAQANGVQKEPLVTWVHKNFQGILTNETRCLRCETVTARDETFLDLS 200
Query: 262 LEIEDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRF 321
L+IE S+ S L++F+ E + + E KF C+KC +K++ + K P + HLKRF
Sbjct: 201 LDIEQNSSITSCLKNFSSTETL-NAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRF 259
Query: 322 KTD---GSYVVKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYF 378
K G Y K+ V FPLEL L D + +Y L+A+V H+GS P GHY
Sbjct: 260 KYIEQLGRY-KKLSYRVVFPLELKL-----SNTVEDADSEYSLFAVVVHVGSGPNHGHYV 313
Query: 379 SYIRSSPDTWHRLNDSRVTRVEEE-----FVLSQD-------AYILFYAKQGT 419
S ++S + W +D V ++E F +Q+ YILFY T
Sbjct: 314 SLVKSH-NHWLFFDDENVEMIDESSVQTFFGSAQEYSSNTDHGYILFYESLAT 365
>gi|302759609|ref|XP_002963227.1| hypothetical protein SELMODRAFT_438411 [Selaginella moellendorffii]
gi|300168495|gb|EFJ35098.1| hypothetical protein SELMODRAFT_438411 [Selaginella moellendorffii]
Length = 364
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 106/338 (31%), Positives = 161/338 (47%), Gaps = 38/338 (11%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICA--LRDHIELSL 166
GLEN GNTC+ N++LQ +P L + G E + C L I
Sbjct: 24 GLENFGNTCYCNSVLQALYFCIPFRDQLLDYYGRIKTVGEAEENLLTCLADLFTQINSQK 83
Query: 167 ASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRL-ESCCLDSKTKDESLSS- 224
+G V++P++ V + F+ Y +DAHEFL LL++L E+ ++K+ + +S
Sbjct: 84 KKTG-VIAPKRFVQRVKKQHELFRSYMHQDAHEFLNFLLNQLVETLEKEAKSDPTAPASP 142
Query: 225 ---QGDN----------IVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLG 271
DN V ++F GCL ++ +C C + + E +DLSL+IE S+
Sbjct: 143 EKKSSDNGATGEEHPLTWVHKIFQGCLTNETRCLRCETITAKDEKFLDLSLDIEQNSSVT 202
Query: 272 SALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTD---GSYV 328
S L +F+ E + + KF C+KC +K++ + P + A HLKRFK G Y
Sbjct: 203 SCLRNFSSTETL-IADDKFFCDKCCSLQEAQKRMKIKTQPRILALHLKRFKYMEQLGRY- 260
Query: 329 VKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTW 388
K+ V FPLEL L S+ E Y L+A+V H+GS P GHY S ++S + W
Sbjct: 261 KKLSYRVVFPLELKLCNTAEDAPGSESE--YSLFAVVVHVGSGPNHGHYVSLVKSH-NHW 317
Query: 389 HRLNDSRVTRVEEEFVL------------SQDAYILFY 414
+D V ++E +V + YILFY
Sbjct: 318 LFFDDENVEMIDESYVQTFFGSTQEYSNNTDHGYILFY 355
>gi|302785516|ref|XP_002974529.1| hypothetical protein SELMODRAFT_414775 [Selaginella moellendorffii]
gi|300157424|gb|EFJ24049.1| hypothetical protein SELMODRAFT_414775 [Selaginella moellendorffii]
Length = 364
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 106/338 (31%), Positives = 161/338 (47%), Gaps = 38/338 (11%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICA--LRDHIELSL 166
GLEN GNTC+ N++LQ +P L + G E + C L I
Sbjct: 24 GLENFGNTCYCNSVLQALYFCIPFRDQLLDYYGRIKTVGEAEENLLTCLADLFTQINSQK 83
Query: 167 ASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRL-ESCCLDSKTKDESLSS- 224
+G V++P++ V + F+ Y +DAHEFL LL++L E+ ++K+ + +S
Sbjct: 84 KKTG-VIAPKRFVQRVKKQHELFRSYMHQDAHEFLNFLLNQLVEALEKEAKSDPTAPASP 142
Query: 225 ---QGDN----------IVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLG 271
DN V ++F GCL ++ +C C + + E +DLSL+IE S+
Sbjct: 143 EKKSSDNGATGEEHPLTWVHKIFQGCLTNETRCLRCETITAKDEKFLDLSLDIEQNSSVT 202
Query: 272 SALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTD---GSYV 328
S L +F+ E + + KF C+KC +K++ + P + A HLKRFK G Y
Sbjct: 203 SCLRNFSSTETL-IADDKFFCDKCCSLQEAQKRMKIKTQPRILALHLKRFKYMEQLGRY- 260
Query: 329 VKIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTW 388
K+ V FPLEL L S+ E Y L+A+V H+GS P GHY S ++S + W
Sbjct: 261 KKLSYRVVFPLELKLCNTAEDAPGSESE--YSLFAVVVHVGSGPNHGHYVSLVKSH-NHW 317
Query: 389 HRLNDSRVTRVEEEFVL------------SQDAYILFY 414
+D V ++E +V + YILFY
Sbjct: 318 LFFDDENVEMIDESYVQTFFGSTQEYSNNTDHGYILFY 355
>gi|328767948|gb|EGF77996.1| hypothetical protein BATDEDRAFT_13604 [Batrachochytrium
dendrobatidis JAM81]
Length = 313
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 149/307 (48%), Gaps = 29/307 (9%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICALRDHIELSLAS 168
G EN GNTC+ N++LQ P + ++ P + A ++ A++ EL +A
Sbjct: 5 GFENFGNTCYCNSVLQVLYFCKPFRNCVVCYNFPESAENAQNS--ILHAMQ---ELFVAI 59
Query: 169 SGK-----VLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLDSKTKDES-- 221
S + V SPR + L + F Q+DAHE LL+ + L+ KT+ +
Sbjct: 60 STQKKRTGVFSPRYFISKLKEENELFNNTMQQDAHEMFNYLLNAIAEILLNQKTEMHANI 119
Query: 222 ---------LSSQGDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEIEDVGSLGS 272
+ +F G L ++ +C NC S ++ E +DLS++I+ S+ S
Sbjct: 120 QYVYLFTLVKEQTAPTWIHALFEGQLTNETKCLNCESITNRVESFLDLSIDIDQHSSISS 179
Query: 273 ALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTD---GSYVV 329
L +F+ E + + KF C+ C EK++ + ++P+V A HLKRFK G Y
Sbjct: 180 CLRNFSSSEVLYG-KNKFFCDTCNSLQEAEKRMKIKRLPNVLAVHLKRFKFQEQLGRY-S 237
Query: 330 KIDKHVEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYFSYIRSSPDTWH 389
K+ V FPLEL L G +N+D Y L+ +V H+GSSP GHY + I+S + W
Sbjct: 238 KLSYQVSFPLELRLFNTADGAENAD--RLYQLHGVVVHIGSSPQSGHYVALIKSE-NQWM 294
Query: 390 RLNDSRV 396
+D V
Sbjct: 295 LFDDDDV 301
>gi|242036661|ref|XP_002465725.1| hypothetical protein SORBIDRAFT_01g044530 [Sorghum bicolor]
gi|241919579|gb|EER92723.1| hypothetical protein SORBIDRAFT_01g044530 [Sorghum bicolor]
Length = 366
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/348 (30%), Positives = 160/348 (45%), Gaps = 54/348 (15%)
Query: 109 GLENLGNTCFINAILQCFTHTLPLVQALRSFDHPRPCDGATEGFCVICA--LRDHIELSL 166
GLEN GNTC+ N++LQ +P L + G E + C L I
Sbjct: 24 GLENFGNTCYCNSVLQALYFCVPFRDQLLEYYANNKNTGDVEENMLTCLADLFSQISNQK 83
Query: 167 ASSGKVLSPRKLVDNLNYISSFFQRYQQEDAHEFLQCLLDRLESCCLD------------ 214
+G V++P++ + L + F+ Y +DAHEFL LL+ L
Sbjct: 84 KKTG-VIAPKRFIQRLKKQNEIFRSYMHQDAHEFLNFLLNELVDILEKEHNAAREPLQNL 142
Query: 215 --SKTKDESLSSQ--------GDNIVQRVFGGCLISKLQCCNCGSCSDTYEPLIDLSLEI 264
K + ++ Q V + F G L ++ +C C + +D E DLSL+I
Sbjct: 143 PFQKNSNGTIDGQPNGSHKELAATWVHKCFQGILTNETRCLRCETVTDRDETFFDLSLDI 202
Query: 265 EDVGSLGSALESFTKLEKIEDPETKFTCEKCKEQVSVEKQLMLDKVPSVAAFHLKRFKTD 324
E SL S L++F+ E + + E KF C+KC +K++ + K P++ HLKRFK
Sbjct: 203 EQNSSLTSCLKNFSSTETL-NAEDKFFCDKCCSLQEAQKRMKIKKPPNILVIHLKRFK-- 259
Query: 325 GSYVVKIDKH------VEFPLELDLKPYTSGGQNSDVELKYHLYAIVEHMGSSPTCGHYF 378
Y+ ++ ++ V FPLEL L + NSD+E Y L+A+V H+GS P GHY
Sbjct: 260 --YIEQLQRYKKLSYRVVFPLELKL---LNTVDNSDLE--YSLFAVVVHVGSGPNHGHYI 312
Query: 379 SYIRSSPDTWHRLNDSRVTRVEEEFVLS------------QDAYILFY 414
S ++S + W +D V +E V + + YILFY
Sbjct: 313 SLVKSH-NHWLFFDDENVEMTDESMVQAFFGSPQEFSGNTDNGYILFY 359
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.132 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,941,009,240
Number of Sequences: 23463169
Number of extensions: 479731992
Number of successful extensions: 1401442
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3714
Number of HSP's successfully gapped in prelim test: 5000
Number of HSP's that attempted gapping in prelim test: 1369373
Number of HSP's gapped (non-prelim): 18380
length of query: 683
length of database: 8,064,228,071
effective HSP length: 150
effective length of query: 533
effective length of database: 8,839,720,017
effective search space: 4711570769061
effective search space used: 4711570769061
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 81 (35.8 bits)