Query 005688
Match_columns 683
No_of_seqs 461 out of 2501
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 04:38:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005688.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005688hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ygq_A WIF-1, WNT inhibitory f 99.7 1E-18 3.4E-23 184.8 8.3 159 117-311 145-311 (324)
2 3fcs_B Integrin beta-3; beta p 99.6 7.4E-16 2.5E-20 176.7 10.7 165 126-313 447-633 (690)
3 3k6s_B Integrin beta-2; cell r 99.6 5.2E-16 1.8E-20 177.5 7.7 65 125-200 435-513 (687)
4 2vj2_A Jagged-1; signalling, p 99.5 8.6E-15 2.9E-19 140.4 4.9 145 97-308 13-169 (169)
5 2gy5_A Angiopoietin-1 receptor 99.4 9.6E-14 3.3E-18 151.8 7.7 146 126-311 204-353 (423)
6 3k6s_B Integrin beta-2; cell r 99.4 1.9E-13 6.5E-18 156.4 8.2 132 126-308 483-623 (687)
7 2gy5_A Angiopoietin-1 receptor 99.4 5.2E-13 1.8E-17 145.9 7.8 128 139-311 186-323 (423)
8 2p28_B Integrin beta-2; hybrid 99.3 1.2E-12 4.2E-17 129.7 6.2 62 234-310 143-216 (217)
9 2vj3_A Neurogenic locus notch 99.3 4.9E-12 1.7E-16 116.5 7.6 34 121-154 6-44 (135)
10 3fcs_B Integrin beta-3; beta p 99.2 2.5E-11 8.7E-16 139.3 13.0 160 97-290 451-641 (690)
11 2ygq_A WIF-1, WNT inhibitory f 99.2 6.4E-12 2.2E-16 132.7 6.6 116 179-312 159-280 (324)
12 1z1y_A Ookinete surface protei 99.2 1.2E-12 4.2E-17 127.3 0.1 141 124-311 10-178 (186)
13 4d90_A EGF-like repeat and dis 99.2 3.3E-11 1.1E-15 111.9 8.7 124 122-310 2-135 (143)
14 2vj2_A Jagged-1; signalling, p 99.1 9E-11 3.1E-15 112.3 5.3 111 137-309 16-130 (169)
15 1klo_A Laminin; glycoprotein; 99.1 7.1E-11 2.4E-15 112.1 4.4 114 126-273 2-145 (162)
16 4fbr_A Lectin, myxobacterial h 99.0 6E-13 2E-17 134.5 -12.2 141 123-276 36-204 (267)
17 4aqs_A Laminin subunit beta-1; 98.9 2.1E-09 7.2E-14 121.2 9.5 193 91-308 281-525 (525)
18 2bou_A EGF-like module contain 98.7 1.4E-08 4.8E-13 94.1 4.9 28 121-149 3-30 (143)
19 1yo8_A Thrombospondin-2; EGF, 98.5 1.1E-07 3.6E-12 107.9 7.6 133 121-281 4-154 (634)
20 2wg3_C Hedgehog-interacting pr 98.5 2.5E-08 8.6E-13 110.4 1.2 76 218-310 380-457 (463)
21 1z1y_A Ookinete surface protei 98.5 1.8E-08 6.3E-13 97.6 -0.4 134 95-275 19-176 (186)
22 4fbr_A Lectin, myxobacterial h 98.4 7.3E-10 2.5E-14 111.9 -10.9 145 139-311 14-205 (267)
23 2vj3_A Neurogenic locus notch 98.4 2.7E-07 9.4E-12 84.5 6.4 91 95-201 22-119 (135)
24 1klo_A Laminin; glycoprotein; 98.4 1.1E-07 3.9E-12 89.9 3.2 102 94-200 24-145 (162)
25 4aqs_A Laminin subunit beta-1; 98.3 3E-07 1E-11 103.5 5.7 108 137-274 406-525 (525)
26 4d90_A EGF-like repeat and dis 98.3 7.8E-07 2.7E-11 82.1 6.5 89 99-201 21-133 (143)
27 3zyj_B Netrin-G1; cell adhesio 98.3 4.6E-07 1.6E-11 97.5 4.8 55 225-300 363-419 (426)
28 1tpg_A T-plasminogen activator 98.3 4.1E-07 1.4E-11 77.4 3.4 50 257-310 31-88 (91)
29 1tpg_A T-plasminogen activator 98.2 6.8E-07 2.3E-11 76.0 4.3 84 139-276 3-88 (91)
30 1aut_L Activated protein C; se 98.1 2.3E-06 7.8E-11 75.9 5.6 67 121-198 16-87 (114)
31 2p28_B Integrin beta-2; hybrid 98.1 1.2E-06 4E-11 86.7 3.1 63 233-309 95-176 (217)
32 1uzk_A Fibrillin-1; glycoprote 98.0 4.8E-07 1.6E-11 85.5 -0.5 127 121-306 4-157 (162)
33 2w86_A Fibrillin-1, fibrillin1 98.0 4.9E-07 1.7E-11 84.0 -1.4 45 257-305 87-141 (147)
34 1x7a_L Coagulation factor IX, 97.9 4.6E-06 1.6E-10 77.3 4.1 66 121-199 49-124 (146)
35 1dx5_I Thrombomodulin; serine 97.9 2.1E-06 7.2E-11 76.7 0.5 99 121-271 5-112 (118)
36 1nfu_B Coagulation factor XA, 97.8 2.4E-06 8.4E-11 82.8 0.4 68 121-199 43-119 (195)
37 2wg3_C Hedgehog-interacting pr 97.8 3.8E-06 1.3E-10 92.8 0.9 66 117-202 389-456 (463)
38 1yo8_A Thrombospondin-2; EGF, 97.8 1.1E-05 3.7E-10 91.5 4.5 95 179-307 15-145 (634)
39 2vh0_B Activated factor XA lig 97.7 4.5E-06 1.5E-10 76.2 0.4 68 121-199 43-119 (134)
40 2c4f_L Coagulation factor VII 97.6 2.9E-05 9.9E-10 71.6 4.0 71 121-200 48-128 (142)
41 3h5c_B Vitamin K-dependent pro 97.6 4.6E-05 1.6E-09 79.8 5.8 67 120-197 5-76 (317)
42 3u7u_G Neuregulin 1; signaling 97.5 4E-05 1.4E-09 58.2 3.0 34 121-154 9-50 (55)
43 3u7u_G Neuregulin 1; signaling 97.5 4E-05 1.4E-09 58.2 3.0 42 269-311 1-52 (55)
44 2e26_A Reelin, reeler protein; 97.5 1.5E-05 5.1E-10 90.3 0.8 51 260-313 520-570 (725)
45 1edm_B Factor IX; epidermal gr 97.5 6.7E-05 2.3E-09 52.7 3.5 33 121-153 4-39 (39)
46 3zyj_B Netrin-G1; cell adhesio 97.4 7.8E-05 2.7E-09 80.2 3.5 43 266-313 360-403 (426)
47 2p26_A Integrin beta-2; hybrid 97.3 7.3E-05 2.5E-09 76.4 3.0 55 253-308 202-275 (280)
48 4aqt_A Laminin subunit gamma-1 97.3 9.3E-05 3.2E-09 78.9 3.8 28 126-153 256-287 (375)
49 2ygo_A WIF-1, WNT inhibitory f 97.3 0.00014 4.7E-09 69.0 4.0 37 117-154 145-181 (188)
50 1nfu_B Coagulation factor XA, 97.3 4.6E-05 1.6E-09 73.8 0.5 66 233-310 47-123 (195)
51 1emn_A Fibrillin; extracellula 97.2 0.00019 6.5E-09 59.4 3.9 63 121-198 6-77 (82)
52 2c4f_L Coagulation factor VII 97.2 8.5E-05 2.9E-09 68.4 1.9 67 233-310 52-131 (142)
53 2ygo_A WIF-1, WNT inhibitory f 97.2 0.00013 4.6E-09 69.1 3.1 33 279-311 150-183 (188)
54 1egf_A Epidermal growth factor 97.2 0.00035 1.2E-08 52.7 4.6 34 121-154 4-45 (53)
55 1x7a_L Coagulation factor IX, 97.2 0.00015 5.2E-09 67.0 3.1 63 233-309 53-127 (146)
56 1a3p_A Epidermal growth factor 97.2 0.00024 8.2E-09 51.6 3.4 29 126-154 10-42 (45)
57 1aut_L Activated protein C; se 97.1 0.00039 1.3E-08 61.4 4.3 59 235-305 21-87 (114)
58 1dx5_I Thrombomodulin; serine 97.1 0.00015 5.1E-09 64.5 1.5 43 257-304 60-111 (118)
59 2vh0_B Activated factor XA lig 97.1 0.0001 3.6E-09 67.1 0.5 65 233-309 47-122 (134)
60 2p26_A Integrin beta-2; hybrid 97.1 0.00029 1E-08 72.0 3.8 59 127-196 198-264 (280)
61 3h5c_B Vitamin K-dependent pro 97.0 0.00078 2.7E-08 70.3 6.7 60 233-305 10-77 (317)
62 1hae_A Heregulin-alpha; growth 97.0 0.00021 7.3E-09 55.9 1.7 39 121-160 7-53 (63)
63 2bou_A EGF-like module contain 97.0 0.00044 1.5E-08 63.5 4.1 61 233-308 6-83 (143)
64 1z6c_A Vitamin K-dependent pro 97.0 0.0002 6.7E-09 60.0 1.3 62 121-199 4-76 (87)
65 1emn_A Fibrillin; extracellula 96.9 0.00068 2.3E-08 56.0 4.1 58 234-305 12-77 (82)
66 1k36_A Epiregulin; EGF-like fo 96.9 0.00043 1.5E-08 50.5 2.4 33 121-154 4-44 (46)
67 1lmj_A Fibrillin 1; EGF, calci 96.9 0.00022 7.7E-09 59.5 0.9 63 121-197 4-79 (86)
68 3ca7_A Protein spitz; argos, E 96.8 0.00011 3.7E-09 55.3 -1.2 39 258-309 3-49 (52)
69 2e26_A Reelin, reeler protein; 96.8 0.00019 6.3E-09 81.5 -0.4 71 218-307 521-593 (725)
70 1nql_B Epidermal growth factor 96.7 0.00068 2.3E-08 51.1 2.2 31 124-154 11-45 (53)
71 2y38_A Laminin subunit alpha-5 96.6 0.0012 4.1E-08 70.7 4.2 70 126-200 267-372 (403)
72 2k2s_B Micronemal protein 6; m 96.5 0.00049 1.7E-08 53.4 0.5 34 121-154 12-51 (61)
73 2w2n_E LDL receptor, low-densi 96.4 0.0008 2.7E-08 58.6 1.4 53 131-197 41-100 (107)
74 3p5b_L Low density lipoprotein 96.4 0.0017 5.8E-08 70.1 4.2 63 121-197 1-71 (400)
75 1edm_B Factor IX; epidermal gr 96.3 0.002 6.9E-08 45.0 2.8 30 279-308 5-39 (39)
76 2w2n_E LDL receptor, low-densi 96.3 0.00089 3E-08 58.4 1.0 44 257-305 49-101 (107)
77 1z6c_A Vitamin K-dependent pro 96.2 0.0034 1.2E-07 52.3 4.0 58 236-309 13-79 (87)
78 3ca7_A Protein spitz; argos, E 96.1 0.0015 5.1E-08 48.9 1.0 30 125-154 14-49 (52)
79 1n7d_A LDL receptor, low-densi 96.1 0.023 8E-07 65.8 11.5 43 257-304 314-365 (699)
80 1a3p_A Epidermal growth factor 96.0 0.0023 7.9E-08 46.3 1.9 28 283-310 10-43 (45)
81 1egf_A Epidermal growth factor 95.8 0.0077 2.6E-07 45.1 4.0 35 234-278 12-48 (53)
82 1lmj_A Fibrillin 1; EGF, calci 95.7 0.0031 1.1E-07 52.4 1.6 45 257-305 24-80 (86)
83 2fd6_A Urokinase-type plasmino 95.7 0.0066 2.3E-07 54.1 3.7 56 126-200 2-62 (122)
84 1nql_B Epidermal growth factor 95.7 0.0025 8.6E-08 47.9 0.8 38 228-275 6-45 (53)
85 3m0c_C LDL receptor, low-densi 95.6 0.011 3.7E-07 69.5 6.3 42 257-303 332-382 (791)
86 3ltf_D Protein spitz; receptor 95.6 0.0036 1.2E-07 48.0 1.4 29 126-154 15-49 (58)
87 2y38_A Laminin subunit alpha-5 95.6 0.0077 2.6E-07 64.5 4.4 17 185-201 285-301 (403)
88 3v65_B Low-density lipoprotein 95.6 0.003 1E-07 67.8 1.1 61 121-195 4-73 (386)
89 4aqt_A Laminin subunit gamma-1 95.5 0.0049 1.7E-07 65.6 2.5 17 185-201 271-287 (375)
90 1k36_A Epiregulin; EGF-like fo 95.4 0.0058 2E-07 44.4 2.0 27 282-309 12-44 (46)
91 1hae_A Heregulin-alpha; growth 95.3 0.0042 1.4E-07 48.4 1.0 44 228-276 6-49 (63)
92 1uzk_A Fibrillin-1; glycoprote 95.3 0.0011 3.7E-08 62.2 -3.1 60 93-152 16-90 (162)
93 1g1s_A P-selectin; selectin, l 95.0 0.0062 2.1E-07 56.7 1.4 41 118-160 117-160 (162)
94 2fd6_A Urokinase-type plasmino 94.8 0.014 4.6E-07 52.0 2.9 61 235-308 2-63 (122)
95 2ddu_A Reelin; beta-jelly-roll 94.7 0.0051 1.8E-07 64.9 -0.3 31 121-153 192-224 (387)
96 2ddu_A Reelin; beta-jelly-roll 94.4 0.0069 2.4E-07 63.9 -0.1 31 278-308 192-224 (387)
97 3ltf_D Protein spitz; receptor 94.3 0.018 6.1E-07 44.0 2.2 28 283-310 15-50 (58)
98 1q4g_A Prostaglandin G/H synth 93.9 0.021 7.1E-07 64.1 2.5 34 121-154 3-41 (553)
99 1n7d_A LDL receptor, low-densi 93.8 0.56 1.9E-05 54.2 14.4 123 127-270 222-365 (699)
100 3p5b_L Low density lipoprotein 93.8 0.028 9.7E-07 60.4 3.2 44 257-305 20-72 (400)
101 2k2s_B Micronemal protein 6; m 93.4 0.022 7.7E-07 44.0 1.1 33 278-310 12-52 (61)
102 2rnl_A Amphiregulin; AR, color 93.1 0.059 2E-06 39.8 2.9 28 125-153 18-49 (50)
103 3nt1_A Prostaglandin-endoperox 92.9 0.034 1.2E-06 62.5 2.1 34 121-154 2-40 (587)
104 1iox_A Betacellulin; EGF-like 92.8 0.037 1.3E-06 40.9 1.5 29 125-154 14-46 (50)
105 3m0c_C LDL receptor, low-densi 92.6 0.088 3E-06 61.8 5.1 20 176-195 321-342 (791)
106 3cfw_A L-selectin; EGF, cell a 92.2 0.066 2.2E-06 49.7 2.8 35 120-154 119-156 (164)
107 3v65_B Low-density lipoprotein 91.0 0.059 2E-06 57.6 1.2 47 257-308 23-83 (386)
108 3e50_C Protransforming growth 91.0 0.13 4.4E-06 37.9 2.7 29 125-154 14-46 (50)
109 1g1s_A P-selectin; selectin, l 90.6 0.06 2E-06 49.9 0.7 28 282-309 125-156 (162)
110 1q4g_A Prostaglandin G/H synth 90.5 0.086 2.9E-06 59.0 1.9 31 281-311 7-43 (553)
111 2i9a_A Urokinase-type plasmino 90.4 0.11 3.8E-06 47.5 2.2 29 126-154 14-47 (145)
112 1xdt_R Hbegf, heparin-binding 89.4 0.15 5.2E-06 41.2 2.1 28 125-153 46-77 (79)
113 1g1t_A E-selectin; EGF, adhesi 89.3 0.098 3.4E-06 48.0 1.0 36 119-154 118-156 (157)
114 1iox_A Betacellulin; EGF-like 89.0 0.12 4.1E-06 38.1 1.1 28 282-310 14-47 (50)
115 3cfw_A L-selectin; EGF, cell a 88.9 0.15 5.2E-06 47.2 2.0 29 282-310 125-157 (164)
116 3nt1_A Prostaglandin-endoperox 88.6 0.15 5.2E-06 57.3 2.0 30 281-310 6-41 (587)
117 2i9a_A Urokinase-type plasmino 88.6 0.17 5.9E-06 46.2 2.1 61 235-308 14-75 (145)
118 2w86_A Fibrillin-1, fibrillin1 88.3 0.055 1.9E-06 49.5 -1.5 47 139-198 89-141 (147)
119 3e50_C Protransforming growth 87.3 0.28 9.6E-06 36.1 2.1 27 282-309 14-46 (50)
120 1g1t_A E-selectin; EGF, adhesi 87.0 0.13 4.3E-06 47.3 0.1 28 282-309 125-156 (157)
121 3qhp_A Type 1 capsular polysac 86.9 0.66 2.3E-05 42.1 5.1 49 628-676 65-115 (166)
122 2rnl_A Amphiregulin; AR, color 86.2 0.34 1.2E-05 35.7 2.1 26 282-308 18-49 (50)
123 1xdt_R Hbegf, heparin-binding 85.4 0.34 1.2E-05 39.2 1.9 26 282-308 46-77 (79)
124 3t3p_B Integrin beta-3; integr 84.3 0.41 1.4E-05 52.0 2.5 26 282-307 446-472 (472)
125 3t3p_B Integrin beta-3; integr 83.8 0.45 1.5E-05 51.7 2.6 25 126-152 447-472 (472)
126 2nzw_A Alpha1,3-fucosyltransfe 83.3 3.1 0.00011 43.8 8.6 72 594-670 193-268 (371)
127 3asi_A Neurexin-1-alpha; beta- 83.1 0.53 1.8E-05 50.5 2.9 34 121-154 186-223 (410)
128 3g5c_A ADAM 22; alpha/beta fol 82.8 0.6 2.1E-05 51.6 3.1 60 248-311 424-484 (510)
129 3g5c_A ADAM 22; alpha/beta fol 80.9 0.66 2.3E-05 51.2 2.6 33 121-154 445-482 (510)
130 3v4v_B Integrin beta-7; cell a 76.0 0.54 1.9E-05 51.3 0.0 26 126-153 468-494 (503)
131 1ob1_C Major merozoite surface 74.4 2.2 7.4E-05 35.9 3.2 41 121-161 5-51 (99)
132 3v4v_B Integrin beta-7; cell a 73.7 0.74 2.5E-05 50.3 0.3 28 282-309 467-495 (503)
133 1gl4_A Nidogen-1, entactin; im 72.1 0.99 3.4E-05 45.7 0.8 33 121-153 6-45 (285)
134 3fl7_A Ephrin receptor; ATP-bi 71.7 3.5 0.00012 45.9 5.2 45 257-307 262-324 (536)
135 3qcw_A Neurexin-1-alpha; synap 69.1 2.2 7.7E-05 52.5 3.2 34 121-154 1018-1055(1245)
136 1ob1_C Major merozoite surface 69.0 4.1 0.00014 34.3 3.7 66 234-308 10-94 (99)
137 3asi_A Neurexin-1-alpha; beta- 65.5 3.3 0.00011 44.2 3.3 31 279-309 187-223 (410)
138 3fl7_A Ephrin receptor; ATP-bi 65.5 2 6.9E-05 47.8 1.6 63 126-195 251-319 (536)
139 3qcw_A Neurexin-1-alpha; synap 62.7 3.2 0.00011 51.1 2.8 34 121-154 620-657 (1245)
140 2bfw_A GLGA glycogen synthase; 60.6 5.9 0.0002 36.8 3.7 48 628-676 106-154 (200)
141 2f9f_A First mannosyl transfer 60.6 5.6 0.00019 36.5 3.5 48 628-676 88-136 (177)
142 1n1i_A Merozoite surface prote 60.3 6.6 0.00022 33.3 3.4 64 235-309 17-96 (105)
143 2jkh_L Factor X light chain; p 59.6 3.9 0.00013 30.3 1.8 26 126-153 10-41 (55)
144 1jlz_A Tityustoxin alpha-KTX; 59.5 1.6 5.5E-05 27.2 -0.3 21 279-299 4-24 (26)
145 1apq_A Complement protease C1R 58.2 5 0.00017 29.1 2.1 23 125-149 20-44 (53)
146 1n1i_A Merozoite surface prote 56.1 9.3 0.00032 32.4 3.6 33 121-153 11-49 (105)
147 1cmr_A Charybdotoxin, alpha ch 52.5 7.8 0.00027 25.3 2.0 15 285-299 17-31 (31)
148 2kl7_A Fibulin-4; secreted, ca 51.1 5.8 0.0002 31.2 1.5 28 121-148 4-37 (71)
149 3okp_A GDP-mannose-dependent a 49.9 12 0.00042 38.5 4.3 50 628-678 263-320 (394)
150 2gek_A Phosphatidylinositol ma 46.8 11 0.00036 39.2 3.3 48 628-676 273-322 (406)
151 1pvz_A K+ toxin-like peptide; 41.2 3.8 0.00013 26.8 -0.8 19 279-297 12-30 (31)
152 1bah_A Charybdotoxin, chabii; 40.2 14 0.00048 25.2 1.8 21 279-299 12-37 (37)
153 2ktc_A Potassium channel toxin 38.6 7.8 0.00027 25.2 0.4 24 121-146 6-32 (34)
154 3c48_A Predicted glycosyltrans 38.6 20 0.00067 37.7 3.8 47 629-676 317-364 (438)
155 2jjm_A Glycosyl transferase, g 38.5 21 0.00072 36.9 4.0 48 628-676 275-323 (394)
156 3oy2_A Glycosyltransferase B73 34.2 23 0.00078 36.9 3.4 49 628-677 264-313 (413)
157 1kig_L Factor XA; glycoprotein 33.5 11 0.00037 27.4 0.5 23 132-154 11-39 (51)
158 2lix_A IMKTX104, potassium cha 38.6 9.5 0.00032 22.9 0.0 11 287-297 16-26 (27)
159 1zlg_A Anosmin 1; insulin-like 32.0 35 0.0012 38.7 4.7 33 279-312 123-155 (680)
160 1wz5_A Potassium channel block 31.9 12 0.00042 25.1 0.5 23 121-145 8-35 (35)
161 2iuy_A Avigt4, glycosyltransfe 31.1 28 0.00096 35.1 3.4 49 628-677 222-281 (342)
162 3fro_A GLGA glycogen synthase; 31.0 30 0.001 36.0 3.7 49 627-676 320-369 (439)
163 1zlg_A Anosmin 1; insulin-like 29.2 40 0.0014 38.2 4.6 25 125-151 52-76 (680)
164 1szb_A Mannose binding lectin- 28.6 21 0.00072 32.7 1.7 24 127-152 137-166 (170)
165 1gl4_A Nidogen-1, entactin; im 28.1 14 0.00048 37.2 0.4 32 233-274 12-45 (285)
166 2iw1_A Lipopolysaccharide core 28.0 41 0.0014 34.1 4.0 42 628-670 261-303 (374)
167 3tbd_A Netrin-G2, laminet-2; l 27.7 25 0.00084 36.4 2.2 28 126-153 271-301 (338)
168 3t5o_A Complement component C6 27.7 26 0.0009 41.5 2.7 32 122-154 501-534 (913)
169 1szb_A Mannose binding lectin- 24.5 15 0.0005 33.8 -0.2 35 265-302 113-157 (170)
170 1f0k_A MURG, UDP-N-acetylgluco 23.5 47 0.0016 33.6 3.4 37 629-669 246-282 (364)
171 1nzi_A Complement C1S componen 20.0 46 0.0016 29.7 2.2 25 126-152 127-157 (159)
No 1
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=99.75 E-value=1e-18 Score=184.84 Aligned_cols=159 Identities=27% Similarity=0.598 Sum_probs=67.0
Q ss_pred cccCCCCCCCCCCCCEEeCCCCceeeCCCCcCCCCCccccCCCCCCCCCCCCCCCcccccCC--CcccCCCceEeeCCCc
Q 005688 117 MIGGKSCKSDCSGQGVCNHELGQCRCFHGFRGKGCSERIHFQCNFPKTPELPYGRWVVSICP--THCDTTRAMCFCGEGT 194 (683)
Q Consensus 117 ~~~~~~C~~~C~~~G~C~~~~G~C~C~~G~~G~~Ce~~~~~~C~~~~~~~~~~g~~~~~~C~--~~C~~~~g~C~C~~G~ 194 (683)
.+....|+++|+++|+|+. .++|.|++||+|++|+.. .|.. .|. +.|.. .+.|.|.+||
T Consensus 145 ~C~~~~C~~~C~~~G~C~~-~~~C~C~~G~~G~~C~~~---~C~~--------------~C~~~G~C~~-~~~C~C~~G~ 205 (324)
T 2ygq_A 145 TCQQAECPGGCRNGGFCNE-RRICECPDGFHGPHCEKA---LCTP--------------RCMNGGLCVT-PGFCICPPGF 205 (324)
T ss_dssp EECCCCCSSCCCSSCEECT-TSCEECCTTEESSSSCEE---SSSS--------------CCCTTCEECS-SCCEECCTTC
T ss_pred cccCCCCCCCCCCCCEECC-CCeEECCCCCcCCCCCCC---CCCC--------------CCCCCCEEcC-CCEEeCCCCc
Confidence 4544688899999999985 689999999999999974 3542 343 34443 5899999999
Q ss_pred ccCCCCCCCCCCCcc-cCCCC---CCCCCCCCCccCCCCCc-cCCCCCCCccccCCcccccccccccccccccCCCCCCC
Q 005688 195 KYPNRPVAEACGFQV-NLPSQ---PGAPKSTDWAKADLDNI-FTTNGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLLG 269 (683)
Q Consensus 195 ~G~~C~~~~~C~~~~-~~~~~---~~~~C~~gw~g~~c~~~-~~~~C~~~G~C~~~~~~~~~~g~c~~g~C~C~~~G~~G 269 (683)
+|..|+.. .|...+ +...| ..|.|.+||.|..|+.. ...+|.++|.|.. .++|.|+ +||+|
T Consensus 206 ~G~~C~~~-~C~~~C~~~G~C~~~~~C~C~~G~~G~~C~~~~C~~~C~~~g~C~~------------~~~C~C~-~G~~G 271 (324)
T 2ygq_A 206 YGVNCDKA-NCSTTCFNGGTCFYPGKCICPPGLEGEQCEISKCPQPCRNGGKCIG------------KSKCKCS-KGYQG 271 (324)
T ss_dssp BTTTTCBC-CCSSCCCSSCCBSCSSCBCCCTTCCTTTTC-----------------------------------------
T ss_pred cCCCcccC-cCCCCCCCCCeeCCCCeeeCCCCccCCCCCcCcCCCcCCCCCEECC------------CCEEECC-CCCcC
Confidence 99999653 232111 11122 34679999999999732 2356777777742 4789999 99999
Q ss_pred CCccccCCCCcCCCCCCCceec-CCeeecCCCcccCCCCCCcc
Q 005688 270 QFCEVPVSSTCVNQCSGHGHCR-GGFCQCDSGWYGVDCSIPSV 311 (683)
Q Consensus 270 ~~C~~~~~~~C~~~C~~~G~C~-~g~C~C~~G~~G~~C~~~~~ 311 (683)
..|+.+ .|.+.|+++|+|+ .++|.|.+||+|.+|+....
T Consensus 272 ~~C~~~---~C~~~C~~~g~C~~~~~C~C~~G~~G~~C~~~~~ 311 (324)
T 2ygq_A 272 DLCSKP---VCEPGCGAHGTCHEPNKCQCQEGWHGRHCNKRYE 311 (324)
T ss_dssp -------------------------------------------
T ss_pred CCCcCC---CCCCCCCCCCEECCCCEeECCCCCcCCCCCCCCc
Confidence 999965 7888999999998 78999999999999988653
No 2
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=99.61 E-value=7.4e-16 Score=176.75 Aligned_cols=165 Identities=18% Similarity=0.303 Sum_probs=111.0
Q ss_pred CCC-CCCEEeCCCCceeeCCCCcCCCCCccc-------cCCCCCCCCCCCCCCCcccccCCCcccCCCceEeeC----CC
Q 005688 126 DCS-GQGVCNHELGQCRCFHGFRGKGCSERI-------HFQCNFPKTPELPYGRWVVSICPTHCDTTRAMCFCG----EG 193 (683)
Q Consensus 126 ~C~-~~G~C~~~~G~C~C~~G~~G~~Ce~~~-------~~~C~~~~~~~~~~g~~~~~~C~~~C~~~~g~C~C~----~G 193 (683)
.|+ ++|.|. .|.|.|++||+|.+|+... .+.|.... ....|.+++.|..|.|.|. +|
T Consensus 447 ~C~~g~G~~~--~G~C~C~~Gy~G~~Ce~~~~~~~~~~~~~C~~~~---------~~~~Cs~~G~C~~g~C~C~~~~~~G 515 (690)
T 3fcs_B 447 RCNNGNGTFE--CGVCRCGPGWLGSQCECSEEDYRPSQQDECSPRE---------GQPVCSQRGECLCGQCVCHSSDFGK 515 (690)
T ss_dssp TTTTTSEEEE--TTEEEECTTCCSSSSCCSCC------CCCCSSSS---------SSCGGGGSEEECSSSEEECCCSSCC
T ss_pred cccCCCCeEe--CCceEeCCCccCCceeeccCccCCccCCcCCCCC---------CCCCCCCCCEEECCeeEeecCCCCC
Confidence 466 677776 7899999999999998642 12344311 1135876666667999999 99
Q ss_pred cccCCCCCC-CCCCC-----cccCCCC--CCCCCCCCCccCCCCCccCCCCCCCccccCC-ccccccccccccccccc-C
Q 005688 194 TKYPNRPVA-EACGF-----QVNLPSQ--PGAPKSTDWAKADLDNIFTTNGSKPGWCNVD-PEEAYALKVQFKEECDC-K 263 (683)
Q Consensus 194 ~~G~~C~~~-~~C~~-----~~~~~~~--~~~~C~~gw~g~~c~~~~~~~C~~~G~C~~~-~~~~~~~g~c~~g~C~C-~ 263 (683)
|+|..|+.. ..|.. +.....| ..|.|.+||+|..|+... ....|... ...|.++|+|+.++|.| .
T Consensus 516 y~G~~Ce~~~~~C~~~~~~~C~~~G~C~~g~C~C~~Gy~G~~CeC~~-----~~~~C~~~~g~~C~~~G~C~~g~C~C~~ 590 (690)
T 3fcs_B 516 ITGKYCECDDFSCVRYKGEMCSGHGQCSCGDCLCDSDWTGYYCNCTT-----RTDTCMSSNGLLCSGRGKCECGSCVCIQ 590 (690)
T ss_dssp CBSTTSCBCSSCCCBSSSSBGGGSEEEETTEEEECTTEESSSSCEEC-----CCTTTBCTTSSBTSSSCEEETTEEECCS
T ss_pred eeCCCcCcccCcCcCCCCCCCCCCCEecCCeeECcCCCcCCCCccCC-----CCCcccCCCCCCCCCCCEEeCCEEECCC
Confidence 999999632 22431 1111111 345689999999998110 01112111 12344555566789999 8
Q ss_pred CCCCCCCCccccCCCCcCCCCCCCceecCCeeecCCCcccCCCCCCccCC
Q 005688 264 YDGLLGQFCEVPVSSTCVNQCSGHGHCRGGFCQCDSGWYGVDCSIPSVMS 313 (683)
Q Consensus 264 ~~G~~G~~C~~~~~~~C~~~C~~~G~C~~g~C~C~~G~~G~~C~~~~~~~ 313 (683)
+||+|..|+.. ..|+++|.++|+|+. |..||+|..|+...|..
T Consensus 591 -~Gy~G~~Ce~C--~~C~~~C~~~g~Cv~----C~~g~tG~~C~~~~C~~ 633 (690)
T 3fcs_B 591 -PGSYGDTCEKC--PTCPDACTFKKECVE----CKKFDRGALHDENTCNR 633 (690)
T ss_dssp -TTCBSTTSCBC--TTSCCTTTSCCGGGT----TTTTCCSSSSSSSCSTT
T ss_pred -CCccCCCcCcC--CCCCCCCCCCCCccc----CCCCCccCCCCcccccc
Confidence 99999999973 368889999999986 99999999888776653
No 3
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=99.60 E-value=5.2e-16 Score=177.52 Aligned_cols=65 Identities=28% Similarity=0.516 Sum_probs=48.7
Q ss_pred CCCCCCCEEeCCCCceeeCCCCcCCCCCcccc--------CCCCCCCCCCCCCCCcccccCCCcccCCCceEeeC-----
Q 005688 125 SDCSGQGVCNHELGQCRCFHGFRGKGCSERIH--------FQCNFPKTPELPYGRWVVSICPTHCDTTRAMCFCG----- 191 (683)
Q Consensus 125 ~~C~~~G~C~~~~G~C~C~~G~~G~~Ce~~~~--------~~C~~~~~~~~~~g~~~~~~C~~~C~~~~g~C~C~----- 191 (683)
+.|+++|+|. .|.|.|++||+|..|+.... ..|.... ....|.++..|..|+|.|.
T Consensus 435 ~~Cs~~G~C~--~g~C~C~~Gy~G~~Cec~~~~~~~~~~~~~C~~~~---------~~~~Cs~~G~C~~G~C~C~~~~~~ 503 (687)
T 3k6s_B 435 SLCHGKGFLE--CGICRCDTGYIGKNCECQTQGRSSQELEGSCRKDN---------NSIICSGLGDCVCGQCLCHTSDVP 503 (687)
T ss_dssp STGGGSEEES--SSSEEECSSEESTTSCEESSSCCCSGGGSTTSSST---------TSCGGGSSEEEETTEEEECCCCST
T ss_pred CCCCCCCEEe--CCEeEcCCCCcCCcccccCCcCCccccCCCCCCCC---------CCCcCCCCCEEeCCEEEcCCCCCC
Confidence 4699999999 89999999999999994310 1243211 1135776666667899999
Q ss_pred -CCcccCCCC
Q 005688 192 -EGTKYPNRP 200 (683)
Q Consensus 192 -~G~~G~~C~ 200 (683)
+||+|..|+
T Consensus 504 ~~G~~G~~Ce 513 (687)
T 3k6s_B 504 GKLIYGQYCE 513 (687)
T ss_dssp TCCEESTTSC
T ss_pred CCCccccccc
Confidence 999999996
No 4
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=99.50 E-value=8.6e-15 Score=140.38 Aligned_cols=145 Identities=27% Similarity=0.567 Sum_probs=98.8
Q ss_pred ccccccccCCCCcccccccCcccCCCCC--CCCCCCCEEeCCCCceeeCCCCcCCCCCccccCCCCCCCCCCCCCCCccc
Q 005688 97 EIGRWLSGCDSVAKEVDLVEMIGGKSCK--SDCSGQGVCNHELGQCRCFHGFRGKGCSERIHFQCNFPKTPELPYGRWVV 174 (683)
Q Consensus 97 ~~g~~~~~c~~~~~~~~~~~~~~~~~C~--~~C~~~G~C~~~~G~C~C~~G~~G~~Ce~~~~~~C~~~~~~~~~~g~~~~ 174 (683)
....+...|+.++.+..+. ..|. ++|+++|+|+. +|+|.|++||+|..|+.. .|..
T Consensus 13 ~~~~~~c~C~~g~~G~~C~-----~~C~~~~~c~~~g~C~~-~g~C~C~~G~~G~~C~~~---~C~~------------- 70 (169)
T 2vj2_A 13 IEGRSAVTCDDYYYGFGCN-----KFCRPRDDFFGHYACDQ-NGNKTCMEGWMGPECNRA---ICRQ------------- 70 (169)
T ss_dssp --------CCTTEETTTTC-----EECCCEEETTEEEEECS-SCCEEECTTEESTTSCEE---CCCT-------------
T ss_pred cccCeeeeCCCcCcCCCcc-----cccCCCCCcCCCCEeCC-CCeeECCCCCcCCCCCCC---CCCC-------------
Confidence 3455566777776654432 2453 36999999985 899999999999999964 3543
Q ss_pred ccCC---CcccCCCceEeeCCCcccCCCCCCCCCCCcccCCCCCCCCCCCCCccCCCCCccCCCCCCCccccCCcccccc
Q 005688 175 SICP---THCDTTRAMCFCGEGTKYPNRPVAEACGFQVNLPSQPGAPKSTDWAKADLDNIFTTNGSKPGWCNVDPEEAYA 251 (683)
Q Consensus 175 ~~C~---~~C~~~~g~C~C~~G~~G~~C~~~~~C~~~~~~~~~~~~~C~~gw~g~~c~~~~~~~C~~~G~C~~~~~~~~~ 251 (683)
.|. +.|.. .+.|.|.+||+|..|+. |. . ...|. +|.|..
T Consensus 71 -~C~~~~g~C~~-~~~C~C~~G~~G~~C~~---C~---~----------------------~~~C~-~g~C~~------- 112 (169)
T 2vj2_A 71 -GCSPKHGSCKL-PGDCRCQYGWQGLYCDK---CI---P----------------------HPGCV-HGICNE------- 112 (169)
T ss_dssp -TCCTTTEECSS-TTCCEECTTEESSSSCE---EC---C----------------------CTTCS-SEECSS-------
T ss_pred -CCCCCCcccCC-CCeeECCCCCCCCCccc---CC---C----------------------CCCCC-CCCcCC-------
Confidence 121 33433 57899999999988742 11 0 11133 346641
Q ss_pred cccccccccccCCCCCCCCCccccCCCCcC--CCCCCCceecC-----CeeecCCCcccCCCCC
Q 005688 252 LKVQFKEECDCKYDGLLGQFCEVPVSSTCV--NQCSGHGHCRG-----GFCQCDSGWYGVDCSI 308 (683)
Q Consensus 252 ~g~c~~g~C~C~~~G~~G~~C~~~~~~~C~--~~C~~~G~C~~-----g~C~C~~G~~G~~C~~ 308 (683)
.++|.|+ +||+|..|+.. ...|. .+|.++|+|++ ++|.|++||+|.+|++
T Consensus 113 -----~~~C~C~-~G~~G~~C~~~-~~~C~~~~~C~~~g~C~~~~~~~~~C~C~~G~~G~~Ce~ 169 (169)
T 2vj2_A 113 -----PWQCLCE-TNWGGQLCDKD-LNYCGTHQPCLNGGTCSNTGPDKYQCSCPEGYSGPNCEI 169 (169)
T ss_dssp -----TTCCEEC-TTEETTTTCEE-SCHHHHTCCCCTTCEEEECSTTCEEEECCTTCCSTTSCC
T ss_pred -----CCEEeCC-CCCCCCcccCC-CCCCCCCCCCCCCCEEcCCCCCCcEeECCCCCcCcCcCC
Confidence 5799998 99999999864 34664 78999999973 5999999999999975
No 5
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=99.43 E-value=9.6e-14 Score=151.76 Aligned_cols=146 Identities=21% Similarity=0.374 Sum_probs=100.1
Q ss_pred CCCCCCEEeCCCCceeeCCCCcCCCCCccccCCCCCCCCCCCCCCCcc-cccCC--CcccCCCceEeeCCCcccCCCCCC
Q 005688 126 DCSGQGVCNHELGQCRCFHGFRGKGCSERIHFQCNFPKTPELPYGRWV-VSICP--THCDTTRAMCFCGEGTKYPNRPVA 202 (683)
Q Consensus 126 ~C~~~G~C~~~~G~C~C~~G~~G~~Ce~~~~~~C~~~~~~~~~~g~~~-~~~C~--~~C~~~~g~C~C~~G~~G~~C~~~ 202 (683)
+|+++|+|+..+++|.|++||+|.+|+.. |..+..+..|...|. ...|. +.|+...++|.|.+||+|..|+.
T Consensus 204 ~C~~~G~C~~~~g~C~C~~G~~G~~Ce~~----C~~g~~g~~C~~~C~~~~~C~~~g~C~~~~~~C~C~~G~~G~~C~~- 278 (423)
T 2gy5_A 204 ACMNNGVCHEDTGECICPPGFMGRTCEKA----CELHTFGRTCKERCSGQEGCKSYVFCLPDPYGCSCATGWKGLQCNE- 278 (423)
T ss_dssp CCCTTCEECTTTCCEECCTTEESTTSCEE----CCTTEESTTSCEECCSTTTTTTCCEEETTTTEEECCBTCBSGGGCB-
T ss_pred CCCCCCEEECCCCcEeCCCCccCCCcccc----cCCCCCCCCcCccCCCCCCCCCCCEECCCCCeEEeCCCcccccccC-
Confidence 79999999987899999999999999974 332110000000000 01232 34554578999999999988853
Q ss_pred CCCCCcccCCCCCCCCCCCCCccCCCCCccCCCCCCCccccCCcccccccccccccccccCCCCCCCCCccccCCCCcCC
Q 005688 203 EACGFQVNLPSQPGAPKSTDWAKADLDNIFTTNGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLLGQFCEVPVSSTCVN 282 (683)
Q Consensus 203 ~~C~~~~~~~~~~~~~C~~gw~g~~c~~~~~~~C~~~G~C~~~~~~~~~~g~c~~g~C~C~~~G~~G~~C~~~~~~~C~~ 282 (683)
.|.+||.|..|+. ..+|.++|.|... ..|.|+ +||+|..|+.. .++.
T Consensus 279 ---------------~C~~G~~G~~C~~--~C~C~ngg~C~~~------------~~C~C~-~G~~G~~Ce~~---~~~~ 325 (423)
T 2gy5_A 279 ---------------ACHPGFYGPDCKL--RCSCNNGEMCDRF------------QGCLCS-PGWQGLQCERE---GIPR 325 (423)
T ss_dssp ---------------CCCTTBCSBTTCC--BCCCTTCCEEETT------------TEEECC-TTCBSTTSCBC---SSCC
T ss_pred ---------------ccCCCCcCCcccc--cccCCCCCEecCC------------CceECC-CCCcCCCCccC---ccCC
Confidence 2778999999974 3478888888642 349999 99999999975 2211
Q ss_pred CCCCCcee-cCCeeecCCCcccCCCCCCcc
Q 005688 283 QCSGHGHC-RGGFCQCDSGWYGVDCSIPSV 311 (683)
Q Consensus 283 ~C~~~G~C-~~g~C~C~~G~~G~~C~~~~~ 311 (683)
.....+ ..+.|.|.+||+|..|+...+
T Consensus 326 --~~~~~~~~~~~~~c~~g~~g~~C~~~~~ 353 (423)
T 2gy5_A 326 --MTPKIVDLPDHIEVNSGKFNPICKASGW 353 (423)
T ss_dssp --CCCEECSCCSBCCEESEEECCEEEEECT
T ss_pred --cCcceecCCCeEEeCCCccCCcccccCC
Confidence 111112 256899999999998876544
No 6
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=99.41 E-value=1.9e-13 Score=156.40 Aligned_cols=132 Identities=24% Similarity=0.461 Sum_probs=92.7
Q ss_pred CCCCCCEEeCCCCceeeC------CCCcCCCCCccccCCCCCCCCCCCCCCCcccccCCC--cccCCCceEeeCCCcccC
Q 005688 126 DCSGQGVCNHELGQCRCF------HGFRGKGCSERIHFQCNFPKTPELPYGRWVVSICPT--HCDTTRAMCFCGEGTKYP 197 (683)
Q Consensus 126 ~C~~~G~C~~~~G~C~C~------~G~~G~~Ce~~~~~~C~~~~~~~~~~g~~~~~~C~~--~C~~~~g~C~C~~G~~G~ 197 (683)
.|+++|+|. .|+|.|+ +||+|..|+.. ...|.... +..|.+ +..|..|+|.|.+||+|.
T Consensus 483 ~Cs~~G~C~--~G~C~C~~~~~~~~G~~G~~Ce~~-~~~C~~~~----------~~~C~~~~~G~C~~g~C~C~~G~~G~ 549 (687)
T 3k6s_B 483 ICSGLGDCV--CGQCLCHTSDVPGKLIYGQYCECD-TINCERYN----------GQVCGGPGRGLCFCGKCRCHPGFEGS 549 (687)
T ss_dssp GGGSSEEEE--TTEEEECCCCSTTCCEESTTSCEE-SSCSCEET----------TEETSHHHHEEEETTEEEECTTCCST
T ss_pred cCCCCCEEe--CCEEEcCCCCCCCCCccccccccc-cccccCCC----------CcCcCCCCCCeEECCEEEcCCCCcCC
Confidence 399999999 7999999 99999999953 34565321 135765 555556899999999999
Q ss_pred CCCCCCCCCCcccCCCCCCCCCCCCCccCCCCCccCCCCCCCccccCCcccccccccccccccccCCCCCCCCCccccCC
Q 005688 198 NRPVAEACGFQVNLPSQPGAPKSTDWAKADLDNIFTTNGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLLGQFCEVPVS 277 (683)
Q Consensus 198 ~C~~~~~C~~~~~~~~~~~~~C~~gw~g~~c~~~~~~~C~~~G~C~~~~~~~~~~g~c~~g~C~C~~~G~~G~~C~~~~~ 277 (683)
.|+.... .. .|.......|+++|.| ..++|.|. +||+|..|++.
T Consensus 550 ~Cec~~~------~~--------------~C~~~~g~~Cs~~G~C-------------~~g~C~C~-~Gy~G~~Ce~c-- 593 (687)
T 3k6s_B 550 ACQCERT------TE--------------GCLNPRRVECSGRGRC-------------RCNVCECH-SGYQLPLCQEC-- 593 (687)
T ss_dssp TSCSCCS------SC--------------TTBCTTCSBTSSSCCB-------------CSSCBCCS-TTCCTTTTCCC--
T ss_pred CCccCCC------CC--------------CCCCCCCCCCCCCCcC-------------CCCEEECC-CCCcCCCCCCC--
Confidence 9852110 00 1111113356777777 36789998 99999999974
Q ss_pred CCcCCCCCCCceecCCeeec-CCCcccCCCCC
Q 005688 278 STCVNQCSGHGHCRGGFCQC-DSGWYGVDCSI 308 (683)
Q Consensus 278 ~~C~~~C~~~G~C~~g~C~C-~~G~~G~~C~~ 308 (683)
..|+++|.++|+|+ +|.| ..|..+..|+.
T Consensus 594 ~~C~~~C~~~g~Cv--~C~~~~~G~~~~~C~~ 623 (687)
T 3k6s_B 594 PGCPSPCGKYISCA--ECLKFEKGPFGKNCSA 623 (687)
T ss_dssp TTSCCCCTTTHHHH--TTTTSCSCCCSSCSSS
T ss_pred CCCCcccCCCCCCC--cccCCCCCCCCccccc
Confidence 36889999999998 4555 33444555653
No 7
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=99.36 E-value=5.2e-13 Score=145.92 Aligned_cols=128 Identities=20% Similarity=0.363 Sum_probs=89.6
Q ss_pred ceeeCCCCcCCCCCccccCCCCCCCCCCCCCCCcccccCCCcccCCCceEeeCCCcccCCCCCCCCCCCcccCCCCCCCC
Q 005688 139 QCRCFHGFRGKGCSERIHFQCNFPKTPELPYGRWVVSICPTHCDTTRAMCFCGEGTKYPNRPVAEACGFQVNLPSQPGAP 218 (683)
Q Consensus 139 ~C~C~~G~~G~~Ce~~~~~~C~~~~~~~~~~g~~~~~~C~~~C~~~~g~C~C~~G~~G~~C~~~~~C~~~~~~~~~~~~~ 218 (683)
.|.|++||.|+.|+.. ..+|.. .+.|+...+.|.|++||+|.+|+..
T Consensus 186 ~c~C~~g~~G~~C~~~-C~~C~~----------------~G~C~~~~g~C~C~~G~~G~~Ce~~---------------- 232 (423)
T 2gy5_A 186 VRRCEAQKWGPECNHL-CTACMN----------------NGVCHEDTGECICPPGFMGRTCEKA---------------- 232 (423)
T ss_dssp ECSSCTTEESTTSCEE-CCCCCT----------------TCEECTTTCCEECCTTEESTTSCEE----------------
T ss_pred CCcCCCCCCCCCCCCC-CCCCCC----------------CCEEECCCCcEeCCCCccCCCcccc----------------
Confidence 5899999999999974 223332 2556666789999999999998531
Q ss_pred CCCCCccCCCCCcc--CCCCCCCccccCCcccccccccccccccccCCCCCCCCCccc-cC----CCCcCC--CCCCCce
Q 005688 219 KSTDWAKADLDNIF--TTNGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLLGQFCEV-PV----SSTCVN--QCSGHGH 289 (683)
Q Consensus 219 C~~gw~g~~c~~~~--~~~C~~~G~C~~~~~~~~~~g~c~~g~C~C~~~G~~G~~C~~-~~----~~~C~~--~C~~~G~ 289 (683)
|..++.|..|.... ...|.+++.|.. ..++|.|+ +||+|..|+. .. ...|.. +|.++|+
T Consensus 233 C~~g~~g~~C~~~C~~~~~C~~~g~C~~-----------~~~~C~C~-~G~~G~~C~~~C~~G~~G~~C~~~C~C~ngg~ 300 (423)
T 2gy5_A 233 CELHTFGRTCKERCSGQEGCKSYVFCLP-----------DPYGCSCA-TGWKGLQCNEACHPGFYGPDCKLRCSCNNGEM 300 (423)
T ss_dssp CCTTEESTTSCEECCSTTTTTTCCEEET-----------TTTEEECC-BTCBSGGGCBCCCTTBCSBTTCCBCCCTTCCE
T ss_pred cCCCCCCCCcCccCCCCCCCCCCCEECC-----------CCCeEEeC-CCcccccccCccCCCCcCCcccccccCCCCCE
Confidence 34566666665311 234555556632 16789998 9999999986 11 012321 6889999
Q ss_pred ec-CCeeecCCCcccCCCCCCcc
Q 005688 290 CR-GGFCQCDSGWYGVDCSIPSV 311 (683)
Q Consensus 290 C~-~g~C~C~~G~~G~~C~~~~~ 311 (683)
|+ ...|.|++||+|.+|+....
T Consensus 301 C~~~~~C~C~~G~~G~~Ce~~~~ 323 (423)
T 2gy5_A 301 CDRFQGCLCSPGWQGLQCEREGI 323 (423)
T ss_dssp EETTTEEECCTTCBSTTSCBCSS
T ss_pred ecCCCceECCCCCcCCCCccCcc
Confidence 97 34599999999999998653
No 8
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=99.31 E-value=1.2e-12 Score=129.67 Aligned_cols=62 Identities=32% Similarity=0.767 Sum_probs=51.3
Q ss_pred CCCCCCccccCCcccccccccccccccccCCCC------CCCCCccccCCCCcCC----CCCCC--ceecCCeeecCCCc
Q 005688 234 TNGSKPGWCNVDPEEAYALKVQFKEECDCKYDG------LLGQFCEVPVSSTCVN----QCSGH--GHCRGGFCQCDSGW 301 (683)
Q Consensus 234 ~~C~~~G~C~~~~~~~~~~g~c~~g~C~C~~~G------~~G~~C~~~~~~~C~~----~C~~~--G~C~~g~C~C~~G~ 301 (683)
..|+++|.| +.++|.|. +| |+|.+|+.. ...|+. .|+++ |+|+.++|.|.+||
T Consensus 143 ~~Csg~G~C-------------~~g~C~C~-~gw~~~~~~~G~~Ce~~-~~~C~~~~g~~C~~~~~G~C~~g~C~C~~G~ 207 (217)
T 2p28_B 143 IICSGLGDC-------------VCGQCLCH-TSDVPGKLIYGQYCECD-TINCERYNGQVCGGPGRGLCFCGKCRCHPGF 207 (217)
T ss_dssp CBGGGTEEE-------------ETTEEEEC-CCCSTTCCEESTTSCEE-SSCSCEETTEETTCTTTEEEETTEEEECTTE
T ss_pred CCCCCCCEE-------------eCCceECC-CCCCCcccEECCCcccC-CccCCCCCCCCCCCCCCcEEeCCeeECCCCC
Confidence 446677777 46789998 99 699999964 347874 49998 99999999999999
Q ss_pred ccCCCCCCc
Q 005688 302 YGVDCSIPS 310 (683)
Q Consensus 302 ~G~~C~~~~ 310 (683)
+|.+|+.+.
T Consensus 208 ~G~~C~~~~ 216 (217)
T 2p28_B 208 EGSACQHHH 216 (217)
T ss_dssp ESTTSCEEC
T ss_pred ccCCcCCCC
Confidence 999999764
No 9
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=99.27 E-value=4.9e-12 Score=116.45 Aligned_cols=34 Identities=32% Similarity=1.004 Sum_probs=28.1
Q ss_pred CCCC---CCCCCCCEEeCCCC--ceeeCCCCcCCCCCcc
Q 005688 121 KSCK---SDCSGQGVCNHELG--QCRCFHGFRGKGCSER 154 (683)
Q Consensus 121 ~~C~---~~C~~~G~C~~~~G--~C~C~~G~~G~~Ce~~ 154 (683)
++|. ++|.++|+|....| +|.|++||+|..|+..
T Consensus 6 deC~~~~~~C~~~g~C~~~~g~~~C~C~~Gy~G~~C~~~ 44 (135)
T 2vj3_A 6 DECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEID 44 (135)
T ss_dssp CTTTSSSCSSSTTCEEEECSSSEEEECCTTEESTTSCEE
T ss_pred ccccCCCCCCCCCCEeECCCCCEEEECCCCCcCCccccc
Confidence 6773 67999999987666 8999999999999854
No 10
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=99.24 E-value=2.5e-11 Score=139.27 Aligned_cols=160 Identities=18% Similarity=0.265 Sum_probs=105.9
Q ss_pred cccccc---ccCCCCcccccccCcc------cCCCCC-----CCCCCCCEEeCCCCceeeC----CCCcCCCCCccccCC
Q 005688 97 EIGRWL---SGCDSVAKEVDLVEMI------GGKSCK-----SDCSGQGVCNHELGQCRCF----HGFRGKGCSERIHFQ 158 (683)
Q Consensus 97 ~~g~~~---~~c~~~~~~~~~~~~~------~~~~C~-----~~C~~~G~C~~~~G~C~C~----~G~~G~~Ce~~~~~~ 158 (683)
..|.+. +.|..++.+..+.... ..+.|. ..|+++|+|. .|+|.|+ +||+|..|+.. ...
T Consensus 451 g~G~~~~G~C~C~~Gy~G~~Ce~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~--~g~C~C~~~~~~Gy~G~~Ce~~-~~~ 527 (690)
T 3fcs_B 451 GNGTFECGVCRCGPGWLGSQCECSEEDYRPSQQDECSPREGQPVCSQRGECL--CGQCVCHSSDFGKITGKYCECD-DFS 527 (690)
T ss_dssp TSEEEETTEEEECTTCCSSSSCCSCC------CCCCSSSSSSCGGGGSEEEC--SSSEEECCCSSCCCBSTTSCBC-SSC
T ss_pred CCCeEeCCceEeCCCccCCceeeccCccCCccCCcCCCCCCCCCCCCCCEEE--CCeeEeecCCCCCeeCCCcCcc-cCc
Confidence 455665 6777777766554221 114583 2499999999 7999999 99999999864 456
Q ss_pred CCCCCCCCCCCCCcccccCCCcccCCCceEeeCCCcccCCCC--C-CCCCCC-----cccCCCC--CCCCC-CCCCccCC
Q 005688 159 CNFPKTPELPYGRWVVSICPTHCDTTRAMCFCGEGTKYPNRP--V-AEACGF-----QVNLPSQ--PGAPK-STDWAKAD 227 (683)
Q Consensus 159 C~~~~~~~~~~g~~~~~~C~~~C~~~~g~C~C~~G~~G~~C~--~-~~~C~~-----~~~~~~~--~~~~C-~~gw~g~~ 227 (683)
|.... +..|.+++.|..+.|.|.+||+|..|+ . ...|.. +.....| ..|.| .+||+|..
T Consensus 528 C~~~~----------~~~C~~~G~C~~g~C~C~~Gy~G~~CeC~~~~~~C~~~~g~~C~~~G~C~~g~C~C~~~Gy~G~~ 597 (690)
T 3fcs_B 528 CVRYK----------GEMCSGHGQCSCGDCLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCECGSCVCIQPGSYGDT 597 (690)
T ss_dssp CCBSS----------SSBGGGSEEEETTEEEECTTEESSSSCEECCCTTTBCTTSSBTSSSCEEETTEEECCSTTCBSTT
T ss_pred CcCCC----------CCCCCCCCEecCCeeECcCCCcCCCCccCCCCCcccCCCCCCCCCCCEEeCCEEECCCCCccCCC
Confidence 76321 125765544455999999999999997 1 123431 1111112 23558 89999999
Q ss_pred CCCc--cCCCCCCCccccCCcccccccccccccccccCCCCCCCCCccccCCCCcCCCCCCCcee
Q 005688 228 LDNI--FTTNGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLLGQFCEVPVSSTCVNQCSGHGHC 290 (683)
Q Consensus 228 c~~~--~~~~C~~~G~C~~~~~~~~~~g~c~~g~C~C~~~G~~G~~C~~~~~~~C~~~C~~~G~C 290 (683)
|+.+ ++.+|.++|.| +. |. .+|+|..|+.. .|...|......
T Consensus 598 Ce~C~~C~~~C~~~g~C-------------v~----C~-~g~tG~~C~~~---~C~~~C~~~~~~ 641 (690)
T 3fcs_B 598 CEKCPTCPDACTFKKEC-------------VE----CK-KFDRGALHDEN---TCNRYCRDEIES 641 (690)
T ss_dssp SCBCTTSCCTTTSCCGG-------------GT----TT-TTCCSSSSSSS---CSTTTCCCEEEC
T ss_pred cCcCCCCCCCCCCCCCc-------------cc----CC-CCCccCCCCcc---ccccccCCccEE
Confidence 9852 23455555555 33 88 99999999864 787777765444
No 11
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=99.23 E-value=6.4e-12 Score=132.66 Aligned_cols=116 Identities=27% Similarity=0.527 Sum_probs=55.1
Q ss_pred CcccCCCceEeeCCCcccCCCCCCCCCCCcc-cCCCC---CCCCCCCCCccCCCCCc-cCCCCCCCccccCCcccccccc
Q 005688 179 THCDTTRAMCFCGEGTKYPNRPVAEACGFQV-NLPSQ---PGAPKSTDWAKADLDNI-FTTNGSKPGWCNVDPEEAYALK 253 (683)
Q Consensus 179 ~~C~~~~g~C~C~~G~~G~~C~~~~~C~~~~-~~~~~---~~~~C~~gw~g~~c~~~-~~~~C~~~G~C~~~~~~~~~~g 253 (683)
+.|.. .+.|.|.+||+|..|+.. .|...+ +...| ..|.|.+||.|..|+.. ....|.++|.|..
T Consensus 159 G~C~~-~~~C~C~~G~~G~~C~~~-~C~~~C~~~G~C~~~~~C~C~~G~~G~~C~~~~C~~~C~~~G~C~~--------- 227 (324)
T 2ygq_A 159 GFCNE-RRICECPDGFHGPHCEKA-LCTPRCMNGGLCVTPGFCICPPGFYGVNCDKANCSTTCFNGGTCFY--------- 227 (324)
T ss_dssp CEECT-TSCEECCTTEESSSSCEE-SSSSCCCTTCEECSSCCEECCTTCBTTTTCBCCCSSCCCSSCCBSC---------
T ss_pred CEECC-CCeEECCCCCcCCCCCCC-CCCCCCCCCCEEcCCCEEeCCCCccCCCcccCcCCCCCCCCCeeCC---------
Confidence 34443 579999999999999652 232111 11111 34568999999999842 2456777777743
Q ss_pred cccccccccCCCCCCCCCccccCCCCcCCCCCCCceec-CCeeecCCCcccCCCCCCccC
Q 005688 254 VQFKEECDCKYDGLLGQFCEVPVSSTCVNQCSGHGHCR-GGFCQCDSGWYGVDCSIPSVM 312 (683)
Q Consensus 254 ~c~~g~C~C~~~G~~G~~C~~~~~~~C~~~C~~~G~C~-~g~C~C~~G~~G~~C~~~~~~ 312 (683)
.++|.|+ +||+|..|+.. .|.++|.++|+|+ .++|.|.+||+|.+|+.+.+.
T Consensus 228 ---~~~C~C~-~G~~G~~C~~~---~C~~~C~~~g~C~~~~~C~C~~G~~G~~C~~~~C~ 280 (324)
T 2ygq_A 228 ---PGKCICP-PGLEGEQCEIS---KCPQPCRNGGKCIGKSKCKCSKGYQGDLCSKPVCE 280 (324)
T ss_dssp ---SSCBCCC-TTCCTTTTC----------------------------------------
T ss_pred ---CCeeeCC-CCccCCCCCcC---cCCCcCCCCCEECCCCEEECCCCCcCCCCcCCCCC
Confidence 4789999 99999999864 7889999999998 579999999999999987654
No 12
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=99.21 E-value=1.2e-12 Score=127.35 Aligned_cols=141 Identities=21% Similarity=0.436 Sum_probs=99.9
Q ss_pred CCCCCCCCEEeCCCC--ceeeCCCCcCC---CCCccccCCCCCCCCCCCCCCCcccccCC--CcccCCC-----c--eEe
Q 005688 124 KSDCSGQGVCNHELG--QCRCFHGFRGK---GCSERIHFQCNFPKTPELPYGRWVVSICP--THCDTTR-----A--MCF 189 (683)
Q Consensus 124 ~~~C~~~G~C~~~~G--~C~C~~G~~G~---~Ce~~~~~~C~~~~~~~~~~g~~~~~~C~--~~C~~~~-----g--~C~ 189 (683)
+++|. ||+|....| +|.|++||+|. .|+. .++|..... ...|. +.|.... + .|.
T Consensus 10 ~~pC~-ng~C~~~~g~~~C~C~~G~~g~~~~~C~~--id~C~~~~~---------~~~C~~~~~C~~~~~~~~~g~y~C~ 77 (186)
T 1z1y_A 10 DTICX-NGQLVQMSNHFXCMCNEGLVHLSENTCEE--XNECXXETL---------GXACGEFGQCIENPDPAQVNMYXCG 77 (186)
T ss_dssp TCCCB-TEEEEECSSCEEEEECTTEEEEETTEEEE--CCCCSGGGT---------TSEEETTEEEEECSSTTSSCSEEEE
T ss_pred CCCCC-CCEeECCCCCeEeECCCCCccCCCCccCC--CCcccCCCC---------CCCCCCCCEeecCCCCcCCCCEECC
Confidence 57888 569987666 89999999988 7874 467763200 02464 4565554 3 899
Q ss_pred eCCCcccCCCCCCCCCCCcccCCCCCCCCCCCCCccCCCCCccCCCCCCCcccc----CCcccccccccccccccccCCC
Q 005688 190 CGEGTKYPNRPVAEACGFQVNLPSQPGAPKSTDWAKADLDNIFTTNGSKPGWCN----VDPEEAYALKVQFKEECDCKYD 265 (683)
Q Consensus 190 C~~G~~G~~C~~~~~C~~~~~~~~~~~~~C~~gw~g~~c~~~~~~~C~~~G~C~----~~~~~~~~~g~c~~g~C~C~~~ 265 (683)
|.+||+|..+. |. . ..|. ..+|.++|.|. .... .++|.|+ +
T Consensus 78 C~~G~~g~~~~----C~--~----------------d~C~---~~~C~~~g~C~~~~~~~~g---------~~~C~C~-~ 122 (186)
T 1z1y_A 78 CIEGYTLXEDT----CV--L----------------DVCQ---YXNCGESGECIVEYLSEIQ---------SAGCSCA-I 122 (186)
T ss_dssp ECTTEEEETTE----EE--E----------------GGGT---TCCCCTTEEEEEEEETTEE---------EEEEEEC-T
T ss_pred CCCCCccCCCC----CC--C----------------CcCc---CCCCCCCCEEeeCCcCCCC---------CceEECC-C
Confidence 99999997651 11 0 0121 44588889996 3221 4699999 9
Q ss_pred CCCC-----CCccccCCCCcCCCC-CCCceec--C--CeeecCCCcccCCCCCCcc
Q 005688 266 GLLG-----QFCEVPVSSTCVNQC-SGHGHCR--G--GFCQCDSGWYGVDCSIPSV 311 (683)
Q Consensus 266 G~~G-----~~C~~~~~~~C~~~C-~~~G~C~--~--g~C~C~~G~~G~~C~~~~~ 311 (683)
||+| ..|+...+..|.++| .++++|+ . .+|.|.+||+|..|+....
T Consensus 123 Gy~g~~~~~~~C~~~~~~~C~~~C~~~~~~C~n~~g~y~C~C~~G~~g~~~~~~~~ 178 (186)
T 1z1y_A 123 GXVPNPEDEXXCTXTGETACQLXCNTDNEVCXNVEGVYXCQCMEGFTFDXEXNVCL 178 (186)
T ss_dssp EEEEETTTTTEEEEEECCCCCCCCCTTTEEEEEETTEEEEEECTTCEEETTTTEEE
T ss_pred CCcccCCCCCcceEcCCCcccccccccCcceecCCCCeeeECCCCCccCcccccCC
Confidence 9998 889764245788899 8999997 2 3899999999999987653
No 13
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=99.19 E-value=3.3e-11 Score=111.90 Aligned_cols=124 Identities=22% Similarity=0.507 Sum_probs=80.1
Q ss_pred CC-CCCCCCCCEEeCCC----CceeeCCCCcCCCCCccccCCCCCCCCCCCCCCCcccccCCCcccCCCceEeeCCCccc
Q 005688 122 SC-KSDCSGQGVCNHEL----GQCRCFHGFRGKGCSERIHFQCNFPKTPELPYGRWVVSICPTHCDTTRAMCFCGEGTKY 196 (683)
Q Consensus 122 ~C-~~~C~~~G~C~~~~----G~C~C~~G~~G~~Ce~~~~~~C~~~~~~~~~~g~~~~~~C~~~C~~~~g~C~C~~G~~G 196 (683)
+| +++|.++|+|.... .+|.|++||+|..|+.. .+|... .
T Consensus 2 ~C~~~pC~~~g~C~~~~~~g~~~C~C~~G~~G~~C~~~--~~~~~~---------------------------------~ 46 (143)
T 4d90_A 2 ICDPNPCENGGICLPGLADGSFSCECPDGFTDPNCSSV--VEVASD---------------------------------E 46 (143)
T ss_dssp -CCSCCCGGGCEEEC-----CCEEECCTTCCTTTTCSC--CCCTTT---------------------------------T
T ss_pred cCCCCcCCCCCEeeCCCCCCCEEeECCCCCCCCCCccC--cccccc---------------------------------c
Confidence 57 67899999998643 27999999999999863 111110 0
Q ss_pred CCCCCCCCCCCcccCCCCCCCCCCCCCccCCCCCccCCCCCCCccccCCcccccccccccccccccCCCCCCCCCccccC
Q 005688 197 PNRPVAEACGFQVNLPSQPGAPKSTDWAKADLDNIFTTNGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLLGQFCEVPV 276 (683)
Q Consensus 197 ~~C~~~~~C~~~~~~~~~~~~~C~~gw~g~~c~~~~~~~C~~~G~C~~~~~~~~~~g~c~~g~C~C~~~G~~G~~C~~~~ 276 (683)
..|.... .|. ..+|.++|.|...... ...+-..++|.|+ +||+|..|+..
T Consensus 47 ~~c~~~~-----------------------~C~---~~~C~~~g~C~~~~~~--~~~~~~~~~C~C~-~G~~G~~C~~~- 96 (143)
T 4d90_A 47 EEPTSAG-----------------------PCT---PNPCHNGGTCEISEAY--RGDTFIGYVCKCP-RGFNGIHCQHN- 96 (143)
T ss_dssp TSCCCCC-----------------------TTS---SCCCCTTCEEEECCCE--ETTEECCEEEECC-TTEESTTSCEE-
T ss_pred cccccCC-----------------------cCC---CCCCCCCCEecCCCcc--ccCCCCCeEeECc-CCCcCCCcccC-
Confidence 0010000 111 4557788888632100 0000015689999 99999999855
Q ss_pred CCCcC-CCCCCCceec--C--CeeecCCCcccCCCCCCc
Q 005688 277 SSTCV-NQCSGHGHCR--G--GFCQCDSGWYGVDCSIPS 310 (683)
Q Consensus 277 ~~~C~-~~C~~~G~C~--~--g~C~C~~G~~G~~C~~~~ 310 (683)
.+.|. ++|.++|+|+ . .+|.|.+||+|.+|+...
T Consensus 97 i~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~c~~~~ 135 (143)
T 4d90_A 97 INECEVEPCKNGGICTDLVANYSCECPGEFMGRNCQYKG 135 (143)
T ss_dssp CCTTTTCCSCTTCEEEEETTEEEEECCTTCBSTTSCBC-
T ss_pred CCcCCCCCCCCCCEeECCCCCeEeECCCCCccCCceecC
Confidence 34564 7899999997 2 389999999999998755
No 14
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=99.06 E-value=9e-11 Score=112.27 Aligned_cols=111 Identities=28% Similarity=0.561 Sum_probs=75.9
Q ss_pred CCceeeCCCCcCCCCCccccCCCCCCCCCCCCCCCcccccCC--CcccCCCceEeeCCCcccCCCCCCCCCCCcccCCCC
Q 005688 137 LGQCRCFHGFRGKGCSERIHFQCNFPKTPELPYGRWVVSICP--THCDTTRAMCFCGEGTKYPNRPVAEACGFQVNLPSQ 214 (683)
Q Consensus 137 ~G~C~C~~G~~G~~Ce~~~~~~C~~~~~~~~~~g~~~~~~C~--~~C~~~~g~C~C~~G~~G~~C~~~~~C~~~~~~~~~ 214 (683)
...|.|++||+|+.|+.. |... ..|. +.|+ ..+.|.|.+||+|..|+.. .|
T Consensus 16 ~~~c~C~~g~~G~~C~~~----C~~~------------~~c~~~g~C~-~~g~C~C~~G~~G~~C~~~-~C--------- 68 (169)
T 2vj2_A 16 RSAVTCDDYYYGFGCNKF----CRPR------------DDFFGHYACD-QNGNKTCMEGWMGPECNRA-IC--------- 68 (169)
T ss_dssp -----CCTTEETTTTCEE----CCCE------------EETTEEEEEC-SSCCEEECTTEESTTSCEE-CC---------
T ss_pred CeeeeCCCcCcCCCcccc----cCCC------------CCcCCCCEeC-CCCeeECCCCCcCCCCCCC-CC---------
Confidence 458999999999999864 4421 1343 3454 3789999999999888532 11
Q ss_pred CCCCCCCCCccCCCCCccCCCCC-CCccccCCcccccccccccccccccCCCCCCCCCccccCCCCcCCCCCCCceec-C
Q 005688 215 PGAPKSTDWAKADLDNIFTTNGS-KPGWCNVDPEEAYALKVQFKEECDCKYDGLLGQFCEVPVSSTCVNQCSGHGHCR-G 292 (683)
Q Consensus 215 ~~~~C~~gw~g~~c~~~~~~~C~-~~G~C~~~~~~~~~~g~c~~g~C~C~~~G~~G~~C~~~~~~~C~~~C~~~G~C~-~ 292 (683)
...|. .+|.|.. .++|.|+ +||+|..|++. .+.+.|. +|+|+ .
T Consensus 69 ------------------~~~C~~~~g~C~~------------~~~C~C~-~G~~G~~C~~C---~~~~~C~-~g~C~~~ 113 (169)
T 2vj2_A 69 ------------------RQGCSPKHGSCKL------------PGDCRCQ-YGWQGLYCDKC---IPHPGCV-HGICNEP 113 (169)
T ss_dssp ------------------CTTCCTTTEECSS------------TTCCEEC-TTEESSSSCEE---CCCTTCS-SEECSST
T ss_pred ------------------CCCCCCCCcccCC------------CCeeECC-CCCCCCCcccC---CCCCCCC-CCCcCCC
Confidence 11243 4667742 5789998 99999999853 2233476 56998 5
Q ss_pred CeeecCCCcccCCCCCC
Q 005688 293 GFCQCDSGWYGVDCSIP 309 (683)
Q Consensus 293 g~C~C~~G~~G~~C~~~ 309 (683)
++|.|.+||+|..|++.
T Consensus 114 ~~C~C~~G~~G~~C~~~ 130 (169)
T 2vj2_A 114 WQCLCETNWGGQLCDKD 130 (169)
T ss_dssp TCCEECTTEETTTTCEE
T ss_pred CEEeCCCCCCCCcccCC
Confidence 79999999999999854
No 15
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=99.05 E-value=7.1e-11 Score=112.08 Aligned_cols=114 Identities=20% Similarity=0.338 Sum_probs=74.3
Q ss_pred CCCCCCEEeCCC----Cce-eeCCCCcCCCCCccccCCCCCCCCCCCC-----CCCcccccCC--------CcccCCCce
Q 005688 126 DCSGQGVCNHEL----GQC-RCFHGFRGKGCSERIHFQCNFPKTPELP-----YGRWVVSICP--------THCDTTRAM 187 (683)
Q Consensus 126 ~C~~~G~C~~~~----G~C-~C~~G~~G~~Ce~~~~~~C~~~~~~~~~-----~g~~~~~~C~--------~~C~~~~g~ 187 (683)
+|.++|+|+..+ ++| .|++||+|.+||. |..+...... ...+....|. +.|+..+|+
T Consensus 2 ~C~~~g~C~~~~~~g~~~C~~C~~g~~G~~Ce~-----C~~g~~g~~~~~~~~~~~C~~C~C~~~~~~~~~~~C~~~tG~ 76 (162)
T 1klo_A 2 PCPGGSSCAIVPKTKEVVCTHCPTGTAGKRCEL-----CDDGYFGDPLGSNGPVRLCRPCQCNDNIDPNAVGNCNRLTGE 76 (162)
T ss_dssp CSCTTCCEEECSSSCCEEECSCCTTEESTTSCE-----ECTTEEEETTCTTSSCEEEEECCSTTCBCTTCSCCBCTTTCC
T ss_pred cCcCcCcccccCCCCCEEeCCCCCCCcCCCCcC-----CCCCCcCCcccccCCCCCCeeCcCCCCCCcccCCcccCCCCc
Confidence 589999998654 389 7999999999996 5443211100 0123333454 357778899
Q ss_pred Ee-eCCCcccCCCCCCCCCCCcccCCCCCCCCCCCCCccCCCCC-----ccCCCCCCCc------cccCCcccccccccc
Q 005688 188 CF-CGEGTKYPNRPVAEACGFQVNLPSQPGAPKSTDWAKADLDN-----IFTTNGSKPG------WCNVDPEEAYALKVQ 255 (683)
Q Consensus 188 C~-C~~G~~G~~C~~~~~C~~~~~~~~~~~~~C~~gw~g~~c~~-----~~~~~C~~~G------~C~~~~~~~~~~g~c 255 (683)
|+ |.++|+|.+|+. |.+||+|..+.. +....|.+.| .|+.
T Consensus 77 C~~C~~g~~G~~Ce~-----------------C~~Gy~g~~~~~~~~~~C~~C~C~~~Gs~~~~~~Cd~----------- 128 (162)
T 1klo_A 77 CLKCIYNTAGFYCDR-----------------CKEGFFGNPLAPNPADKCKACACNPYGTVQQQSSCNP----------- 128 (162)
T ss_dssp BCCBCTTEETTTTCE-----------------ECTTEEECTTCSSGGGSEEECCCCTTTBGGGCCCCCT-----------
T ss_pred ccCCCCCCcCCCcCc-----------------CchhhcCCccccCCCCCCeeccCCCCCccCCCCCCCC-----------
Confidence 95 999999998853 567787776651 1234455554 3422
Q ss_pred cccccccCCCCCCCCCcc
Q 005688 256 FKEECDCKYDGLLGQFCE 273 (683)
Q Consensus 256 ~~g~C~C~~~G~~G~~C~ 273 (683)
++|+|.|+ +||+|..|+
T Consensus 129 ~tG~C~C~-~g~~G~~Cd 145 (162)
T 1klo_A 129 VTGQCQCL-PHVSGRDCG 145 (162)
T ss_dssp TTCCCCBC-TTEESTTCC
T ss_pred CCCEeECC-CCCcCCCCC
Confidence 26777777 777777776
No 16
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=99.02 E-value=6e-13 Score=134.48 Aligned_cols=141 Identities=11% Similarity=-0.097 Sum_probs=85.2
Q ss_pred CCCCCCCCCEEeCCCC--ceeeCCCCcCCCCCccccCC------CCCCCCCCC----------CCCCcccccCC--Cccc
Q 005688 123 CKSDCSGQGVCNHELG--QCRCFHGFRGKGCSERIHFQ------CNFPKTPEL----------PYGRWVVSICP--THCD 182 (683)
Q Consensus 123 C~~~C~~~G~C~~~~G--~C~C~~G~~G~~Ce~~~~~~------C~~~~~~~~----------~~g~~~~~~C~--~~C~ 182 (683)
+..+|.++|+|....+ +|.|++||+|..||.. .++ |.+.++... ..-.+...+|. +.|.
T Consensus 36 ~~~~c~ngG~C~~g~~~y~C~Cp~Gf~G~~Ce~n-i~ec~~~~~c~s~pC~nggtc~~G~~c~~~~eC~s~pC~ngG~C~ 114 (267)
T 4fbr_A 36 LDIKSDDGGKTLKGTMTYNGEGPIGFRGTLSSAN-NYTVENQWGGTSAPWQPGGVWVLGARDKQNIVAVSIKSNDGGKTL 114 (267)
T ss_dssp EEEECSSTTSEEEEEEEETTSCCEEEEEEECSTT-EEEEEEESSSTTSCEEEEEEEECCCCSSCCEEEEEEECSSTTSEE
T ss_pred CCCCcCCCCeecCCCCCeEEeCCCCccccccccc-ccccccccCcCCCcccCCCeeeccCccccccccCCCCCCCCCEEe
Confidence 3457999999985444 8999999999999975 333 443322210 00012222332 3343
Q ss_pred CC--CceEeeCCCcccCCCCCCCCCCCcccCCCCCCCCCCCC---CccCCCCCcc---CCCCCCCccccCCccccccccc
Q 005688 183 TT--RAMCFCGEGTKYPNRPVAEACGFQVNLPSQPGAPKSTD---WAKADLDNIF---TTNGSKPGWCNVDPEEAYALKV 254 (683)
Q Consensus 183 ~~--~g~C~C~~G~~G~~C~~~~~C~~~~~~~~~~~~~C~~g---w~g~~c~~~~---~~~C~~~G~C~~~~~~~~~~g~ 254 (683)
.. ...|.|+.||+|.+|+...+- +.+...+..+.|..+ +.|..|+..+ ..+|.++|+|.....
T Consensus 115 ~~~~sy~C~C~~Gf~G~~Ce~~~d~--C~n~~~c~s~pC~ngg~c~~G~~c~~~i~c~~~~c~ngg~C~dg~~------- 185 (267)
T 4fbr_A 115 TGTTTYNGEGPIGFKSEVTDGDTYS--VENQWGGSAAPWHSGGVWVLGTRGKQNVINVDAKSNDGGKTLSGTM------- 185 (267)
T ss_dssp EEEEEETTSCCEEEEEEECCCCEEE--EEEECSSTTSCCEEEEEEECCSSTTSCEEEEEEECSSTTSEEEEEE-------
T ss_pred cCCccEEeeCCCCccccCCCCCccc--ccccCCcCCccccCCcceecccccccccccCCCCCCCCCEeeCCCC-------
Confidence 32 237899999999999765321 112222333344333 3466665332 556777888754322
Q ss_pred ccccccccCCCCCCCCCccccC
Q 005688 255 QFKEECDCKYDGLLGQFCEVPV 276 (683)
Q Consensus 255 c~~g~C~C~~~G~~G~~C~~~~ 276 (683)
.++|.|+ +||+|..|+..+
T Consensus 186 --~y~C~Cp-~Gf~G~~c~~~i 204 (267)
T 4fbr_A 186 --TYNGEGP-IGFRGTLTSPDT 204 (267)
T ss_dssp --EETTSCC-EEEEEEEEETTE
T ss_pred --CeEEeCC-CCcccccccccc
Confidence 5689999 999999998764
No 17
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=98.90 E-value=2.1e-09 Score=121.21 Aligned_cols=193 Identities=18% Similarity=0.288 Sum_probs=82.9
Q ss_pred cCccccccccccccCCCCcccccccCcc--cCCCC-CCCCCCCC-EEeC-----------CCCce-eeCCCCcCCCCCcc
Q 005688 91 NAPWKAEIGRWLSGCDSVAKEVDLVEMI--GGKSC-KSDCSGQG-VCNH-----------ELGQC-RCFHGFRGKGCSER 154 (683)
Q Consensus 91 ~~~~~~~~g~~~~~c~~~~~~~~~~~~~--~~~~C-~~~C~~~G-~C~~-----------~~G~C-~C~~G~~G~~Ce~~ 154 (683)
+.-..+..|..++.|..++...++.... ....| ...|.+++ .|.. ..|.| .|..||.|.+|+.-
T Consensus 281 C~C~~G~~G~~Ce~C~~g~~~~p~~~~~c~~~~~~~~C~C~~~~~~C~~d~~~c~~~~~~~gg~C~~C~~g~~G~~Ce~C 360 (525)
T 4aqs_A 281 CMCRHNTKGLNCELCMDFYHDLPWRPAEGRNSNACKKCNCNEHSSSCHFDMAVFLATGNVSGGVCDNCQHNTMGRNCEQC 360 (525)
T ss_dssp ECCCTTEESSSSCEECTTCCSSCCCCCBTTBCCCCCCCCCTTSCSEEEECHHHHHHTTSSCCEEEESCCTTEESTTSCEE
T ss_pred ccCcCCCcCCCCcCCCCccCCCccCCCcccCCCcccccccCCCCCCCCCCcccccccCccCCCcccCCCCCCCCCCcccc
Confidence 3344455666666666655544432211 11122 34565554 4431 12344 79999999999852
Q ss_pred c----cCCCCCCCC-------CCCCCCCcccccCC----CcccCCCceEeeCCCcccCCCCCCCCCCCcccCCCCCCCCC
Q 005688 155 I----HFQCNFPKT-------PELPYGRWVVSICP----THCDTTRAMCFCGEGTKYPNRPVAEACGFQVNLPSQPGAPK 219 (683)
Q Consensus 155 ~----~~~C~~~~~-------~~~~~g~~~~~~C~----~~C~~~~g~C~C~~G~~G~~C~~~~~C~~~~~~~~~~~~~C 219 (683)
. ..++..... ...+.+...+..|. ..+....+.|.|.+++.|..|+ .|
T Consensus 361 ~~g~~~~~~~~~~~~~~~~~C~C~~~~~~~~~~C~~~~~~~~~~~~~~C~C~~g~~G~~C~-----------------~C 423 (525)
T 4aqs_A 361 KPFYFQHPERDIRDPNLCEPCTCDPAGSENGGICDGYTDFSVGLIAGQCRCKLHVEGERCD-----------------VC 423 (525)
T ss_dssp CTTEEECSSSCTTCTTCEEECCCCTTTBSGGGCCCCSCBGGGTBCSSCCCBCTTEETTTTC-----------------EE
T ss_pred cCcccccCCCCCCCCCCCcCCCCCCCCCCCCccccCCCCCCcCCCCCccCCCCCCCCCccc-----------------CC
Confidence 1 011111000 00111111122221 1122234577888888877763 15
Q ss_pred CCCCccCCCCCc---cCCCCCCCccccCCcccccccccc--cccccccCCCCCCCCCccccC---------CCCcC-CCC
Q 005688 220 STDWAKADLDNI---FTTNGSKPGWCNVDPEEAYALKVQ--FKEECDCKYDGLLGQFCEVPV---------SSTCV-NQC 284 (683)
Q Consensus 220 ~~gw~g~~c~~~---~~~~C~~~G~C~~~~~~~~~~g~c--~~g~C~C~~~G~~G~~C~~~~---------~~~C~-~~C 284 (683)
.+||+|..|+.. ...+|.+.|.|... +.| .+|+|.|+ +||+|..|+... ...|. .+|
T Consensus 424 ~~Gy~G~~c~~~~~C~~C~C~~~gtc~~~-------~~Cd~~tg~C~C~-~g~~G~~Ce~C~~G~~g~~~~~~~C~~C~C 495 (525)
T 4aqs_A 424 KEGFYDLSAEDPYGCKSCACNPLGTIPGG-------NPCDSETGYCYCK-RLVTGQRCDQCLPQHWGLSNDLDGCRPCDC 495 (525)
T ss_dssp CTTEECCCTTSTTSSEECCCCTTTBCCSS-------CCBCTTTCCBCBC-TTCCSTTTCC--------------------
T ss_pred CCCCcCCCCCCCCCCccCCCCCCceecCC-------CcccCCCCEEECC-CCCcCCCcccCCCCccCCCCCCCCCcCCCC
Confidence 667777666532 24567777776432 122 36799999 999999998531 12343 356
Q ss_pred CCCce----ec--CCeeecCCCcccCCCCC
Q 005688 285 SGHGH----CR--GGFCQCDSGWYGVDCSI 308 (683)
Q Consensus 285 ~~~G~----C~--~g~C~C~~G~~G~~C~~ 308 (683)
.++|. |. +|+|.|++||+|..|++
T Consensus 496 ~~~gs~~~~C~~~tG~C~C~~G~~G~~Ceq 525 (525)
T 4aqs_A 496 DLGGALNNSCSEDSGQCSCLPHMIGRQCNE 525 (525)
T ss_dssp ------------------------------
T ss_pred CCCCccCCccCCCCCeeECCCCCcCCCCCC
Confidence 66665 43 57899999999999974
No 18
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=98.66 E-value=1.4e-08 Score=94.09 Aligned_cols=28 Identities=29% Similarity=0.738 Sum_probs=24.2
Q ss_pred CCCCCCCCCCCEEeCCCCceeeCCCCcCC
Q 005688 121 KSCKSDCSGQGVCNHELGQCRCFHGFRGK 149 (683)
Q Consensus 121 ~~C~~~C~~~G~C~~~~G~C~C~~G~~G~ 149 (683)
..|++.|.++|+|+. ..+|.|++||+|.
T Consensus 3 ~~C~~~C~~~~~C~~-~~~C~C~~G~~g~ 30 (143)
T 2bou_A 3 RGCARWCPQDSSCVN-ATACRCNPGFSSF 30 (143)
T ss_dssp CCCCTTCCTTEEESS-SSCEEECTTEECS
T ss_pred CCCcCcCCCCCEEcC-CCEEeCCCCCcCc
Confidence 468889999999985 4799999999985
No 19
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=98.51 E-value=1.1e-07 Score=107.88 Aligned_cols=133 Identities=20% Similarity=0.333 Sum_probs=79.5
Q ss_pred CCC-CCCCCCCCEEeCCC-C--ce-eeCCCCcC--CCCCccccCCCCCCCCCCCCCCCcccccCC--C---cccCCCc--
Q 005688 121 KSC-KSDCSGQGVCNHEL-G--QC-RCFHGFRG--KGCSERIHFQCNFPKTPELPYGRWVVSICP--T---HCDTTRA-- 186 (683)
Q Consensus 121 ~~C-~~~C~~~G~C~~~~-G--~C-~C~~G~~G--~~Ce~~~~~~C~~~~~~~~~~g~~~~~~C~--~---~C~~~~g-- 186 (683)
++| +++|.++++|.... | +| .|++||+| ..|+. .++|..... .|. + .|....+
T Consensus 4 DeC~~nPC~~gg~C~n~~~Gsy~C~~C~~GytGdg~~CeD--iDEC~~~p~-----------~C~~gg~~~~CvNt~gsY 70 (634)
T 1yo8_A 4 DGCLSNPCFPGAQCSSFPDGSWSCGFCPVGFLGNGTHCED--LDECALVPD-----------ICFSTSKVPRCVNTQPGF 70 (634)
T ss_dssp CGGGGCCSCTTCCEEECTTSCEEECCCCTTBCSCSSSCCB--CCTTTTSCC-----------CSCCCSSSCCEEECSSSE
T ss_pred cccCCCCCCCCCEEecCCCCCeECCcCCCccCCCCCCccc--cccccCCCC-----------cccCCccccceeeccCce
Confidence 577 67899999998655 3 79 99999999 78984 578875421 254 2 5655543
Q ss_pred eEe-eCCCcccCCCCCCCCCCCcccCCCCCCCCCCCCCccCCCCCccCCCCCCCccccCCcccccccccccccccccCCC
Q 005688 187 MCF-CGEGTKYPNRPVAEACGFQVNLPSQPGAPKSTDWAKADLDNIFTTNGSKPGWCNVDPEEAYALKVQFKEECDCKYD 265 (683)
Q Consensus 187 ~C~-C~~G~~G~~C~~~~~C~~~~~~~~~~~~~C~~gw~g~~c~~~~~~~C~~~G~C~~~~~~~~~~g~c~~g~C~C~~~ 265 (683)
+|. |++||+|..|..............|.. -..|. ....+|.+++.|...... .--.++|.|+ +
T Consensus 71 ~C~~C~~Gy~G~~c~g~g~~~~~~dg~~C~d--------ideC~-~~~~pC~~~~~Cvnt~~~-----~~GsY~C~C~-~ 135 (634)
T 1yo8_A 71 HCLPCPPRYRGNQPVGVGLEAAKTEKQVCEP--------ENPCK-DKTHNCHKHAECIYLGHF-----SDPMYKCECQ-T 135 (634)
T ss_dssp EECCCCTTEEECCCEESSSHHHHSCCCCEEE--------CCTTT-TTCCCCCTTEEEEECCTT-----CSSSEEEEEC-T
T ss_pred ecccCCCCcccCccccccccccccCCCcccc--------ccccc-CCCcccccCccccccccc-----cccceeeecc-C
Confidence 898 999999988741000000000000000 00121 013468888888654300 0015699999 9
Q ss_pred CCCC--CCcccc-CCCCcC
Q 005688 266 GLLG--QFCEVP-VSSTCV 281 (683)
Q Consensus 266 G~~G--~~C~~~-~~~~C~ 281 (683)
||+| ..|+.. ....|+
T Consensus 136 Gy~GdG~~Ce~d~DiDeC~ 154 (634)
T 1yo8_A 136 GYAGDGLICGEDSDLDGWP 154 (634)
T ss_dssp TEEESSSSEEECTTSSSSC
T ss_pred CccccCcccccccCccccc
Confidence 9998 789743 134554
No 20
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=98.47 E-value=2.5e-08 Score=110.36 Aligned_cols=76 Identities=24% Similarity=0.573 Sum_probs=32.6
Q ss_pred CCCCCCccCCCCCc-cCCCCCCCccccCCcccccccccccccccccCCCCCCCCCccccCCCCcCCCCCCCceec-CCee
Q 005688 218 PKSTDWAKADLDNI-FTTNGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLLGQFCEVPVSSTCVNQCSGHGHCR-GGFC 295 (683)
Q Consensus 218 ~C~~gw~g~~c~~~-~~~~C~~~G~C~~~~~~~~~~g~c~~g~C~C~~~G~~G~~C~~~~~~~C~~~C~~~G~C~-~g~C 295 (683)
.|..+|+|..|+.. +..+|.+ |.|.. .++|.|. +||+|..|++. .|.++|+++|+|+ .+.|
T Consensus 380 ~C~~~~~g~~c~~~~C~~~C~n-G~C~~------------~~~C~C~-~G~~G~~C~~~---~C~~~C~~~g~C~~~~~C 442 (463)
T 2wg3_C 380 ECRATVQPAQTLTSECSRLCRN-GYCTP------------TGKCCCS-PGWEGDFCRTA---KCEPACRHGGVCVRPNKC 442 (463)
T ss_dssp GGCCCCCCCCCCCCHHHHHCCS-EEECT------------TSCEEEC-TTEESTTSCEE---CC----------------
T ss_pred cCCCCCcCCCCccccccCCCCC-CccCC------------CCeECCC-CCcCCCcCCcC---cCCCCCCCCCEECCCCEE
Confidence 47778888877631 1224554 66642 4689998 99999999865 7888999999998 4899
Q ss_pred ecCCCcccCCCCCCc
Q 005688 296 QCDSGWYGVDCSIPS 310 (683)
Q Consensus 296 ~C~~G~~G~~C~~~~ 310 (683)
.|.+||+|..|++..
T Consensus 443 ~C~~G~~G~~C~~~~ 457 (463)
T 2wg3_C 443 LCKKGYLGPQCEQVD 457 (463)
T ss_dssp ---------------
T ss_pred ECCCCcccCCCCCCc
Confidence 999999999999865
No 21
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=98.45 E-value=1.8e-08 Score=97.64 Aligned_cols=134 Identities=15% Similarity=0.289 Sum_probs=85.9
Q ss_pred ccccccccccCCCCcccc---cccCcccCCCCC-----CCCCCCCEEeCCC-----C--ceeeCCCCcCCCCCccccCCC
Q 005688 95 KAEIGRWLSGCDSVAKEV---DLVEMIGGKSCK-----SDCSGQGVCNHEL-----G--QCRCFHGFRGKGCSERIHFQC 159 (683)
Q Consensus 95 ~~~~g~~~~~c~~~~~~~---~~~~~~~~~~C~-----~~C~~~G~C~~~~-----G--~C~C~~G~~G~~Ce~~~~~~C 159 (683)
....|.|...|+.++... .+. + .++|. ++|.++|+|.... | +|.|++||+|..|+-. .++|
T Consensus 19 ~~~~g~~~C~C~~G~~g~~~~~C~-~--id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~g~~~~C~-~d~C 94 (186)
T 1z1y_A 19 VQMSNHFXCMCNEGLVHLSENTCE-E--XNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTLXEDTCV-LDVC 94 (186)
T ss_dssp EECSSCEEEEECTTEEEEETTEEE-E--CCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTTEEEETTEEE-EGGG
T ss_pred ECCCCCeEeECCCCCccCCCCccC-C--CCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCccCCCCCC-CCcC
Confidence 345678888998888754 222 2 37784 4699999998766 4 7999999999976533 4567
Q ss_pred CCCCCCCCCCCCcccccCC--Cccc----CCC--ceEeeCCCcccCCCCCCCCCCCcccCCCCCCCCCCCCCccCCCCCc
Q 005688 160 NFPKTPELPYGRWVVSICP--THCD----TTR--AMCFCGEGTKYPNRPVAEACGFQVNLPSQPGAPKSTDWAKADLDNI 231 (683)
Q Consensus 160 ~~~~~~~~~~g~~~~~~C~--~~C~----~~~--g~C~C~~G~~G~~C~~~~~C~~~~~~~~~~~~~C~~gw~g~~c~~~ 231 (683)
... .|. +.|. ... ..|.|.+||+|..++ ...|... .. ..|
T Consensus 95 ~~~-------------~C~~~g~C~~~~~~~~g~~~C~C~~Gy~g~~~~-~~~C~~~-~~--------------~~C--- 142 (186)
T 1z1y_A 95 QYX-------------NCGESGECIVEYLSEIQSAGCSCAIGXVPNPED-EXXCTXT-GE--------------TAC--- 142 (186)
T ss_dssp TTC-------------CCCTTEEEEEEEETTEEEEEEEECTEEEEETTT-TTEEEEE-EC--------------CCC---
T ss_pred cCC-------------CCCCCCEEeeCCcCCCCCceEECCCCCcccCCC-CCcceEc-CC--------------Ccc---
Confidence 653 343 4454 443 389999999983211 0111100 00 011
Q ss_pred cCCCC-CCCccccCCcccccccccccccccccCCCCCCCCCcccc
Q 005688 232 FTTNG-SKPGWCNVDPEEAYALKVQFKEECDCKYDGLLGQFCEVP 275 (683)
Q Consensus 232 ~~~~C-~~~G~C~~~~~~~~~~g~c~~g~C~C~~~G~~G~~C~~~ 275 (683)
..+| .+++.|..... .++|.|+ +||+|..|+..
T Consensus 143 -~~~C~~~~~~C~n~~g---------~y~C~C~-~G~~g~~~~~~ 176 (186)
T 1z1y_A 143 -QLXCNTDNEVCXNVEG---------VYXCQCM-EGFTFDXEXNV 176 (186)
T ss_dssp -CCCCCTTTEEEEEETT---------EEEEEEC-TTCEEETTTTE
T ss_pred -cccccccCcceecCCC---------CeeeECC-CCCccCccccc
Confidence 1257 67888865322 4689999 99999998764
No 22
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=98.44 E-value=7.3e-10 Score=111.95 Aligned_cols=145 Identities=10% Similarity=-0.017 Sum_probs=92.4
Q ss_pred ceeeCCC---CcCCCCCccccCCCCCCCCCCCCCCCcccccCC--CcccCC--CceEeeCCCcccCCCCCCCC-CCCccc
Q 005688 139 QCRCFHG---FRGKGCSERIHFQCNFPKTPELPYGRWVVSICP--THCDTT--RAMCFCGEGTKYPNRPVAEA-CGFQVN 210 (683)
Q Consensus 139 ~C~C~~G---~~G~~Ce~~~~~~C~~~~~~~~~~g~~~~~~C~--~~C~~~--~g~C~C~~G~~G~~C~~~~~-C~~~~~ 210 (683)
.|.|.+| +.|..|+... ..+.. .|. +.|.+. ...|.|+.||+|.+|+...+ |. +
T Consensus 14 s~~~~pgg~~~~g~~~~~n~-~~~~~--------------~c~ngG~C~~g~~~y~C~Cp~Gf~G~~Ce~ni~ec~---~ 75 (267)
T 4fbr_A 14 QATWNPGGLWLIGARDKQNV-VALDI--------------KSDDGGKTLKGTMTYNGEGPIGFRGTLSSANNYTVE---N 75 (267)
T ss_dssp TSCCEEEEEEECCCCSSCCE-EEEEE--------------ECSSTTSEEEEEEEETTSCCEEEEEEECSTTEEEEE---E
T ss_pred cCCcCCCCceeecccccccc-ccCCC--------------CcCCCCeecCCCCCeEEeCCCCcccccccccccccc---c
Confidence 5666777 7788887642 22221 222 344433 23899999999999965432 21 2
Q ss_pred CCCCCCCCCCCC---CccCCCCCcc---CCCCCCCccccCCcccccccccccccccccCCCCCCCCCccccCC-------
Q 005688 211 LPSQPGAPKSTD---WAKADLDNIF---TTNGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLLGQFCEVPVS------- 277 (683)
Q Consensus 211 ~~~~~~~~C~~g---w~g~~c~~~~---~~~C~~~G~C~~~~~~~~~~g~c~~g~C~C~~~G~~G~~C~~~~~------- 277 (683)
...+...+|.++ +.|..|+... +.+|.+.|+|..... .++|.|+ +||+|..|+..+.
T Consensus 76 ~~~c~s~pC~nggtc~~G~~c~~~~eC~s~pC~ngG~C~~~~~---------sy~C~C~-~Gf~G~~Ce~~~d~C~n~~~ 145 (267)
T 4fbr_A 76 QWGGTSAPWQPGGVWVLGARDKQNIVAVSIKSNDGGKTLTGTT---------TYNGEGP-IGFKSEVTDGDTYSVENQWG 145 (267)
T ss_dssp ESSSTTSCEEEEEEEECCCCSSCCEEEEEEECSSTTSEEEEEE---------EETTSCC-EEEEEEECCCCEEEEEEECS
T ss_pred ccCcCCCcccCCCeeeccCccccccccCCCCCCCCCEEecCCc---------cEEeeCC-CCccccCCCCCcccccccCC
Confidence 223444455553 3456665332 566778888754322 5799998 9999999987531
Q ss_pred ----------------------CCcCCCCCCCceecCC----eeecCCCcccCCCCCCcc
Q 005688 278 ----------------------STCVNQCSGHGHCRGG----FCQCDSGWYGVDCSIPSV 311 (683)
Q Consensus 278 ----------------------~~C~~~C~~~G~C~~g----~C~C~~G~~G~~C~~~~~ 311 (683)
+.+..+|.++|+|+++ +|.|++||+|..|+....
T Consensus 146 c~s~pC~ngg~c~~G~~c~~~i~c~~~~c~ngg~C~dg~~~y~C~Cp~Gf~G~~c~~~i~ 205 (267)
T 4fbr_A 146 GSAAPWHSGGVWVLGTRGKQNVINVDAKSNDGGKTLSGTMTYNGEGPIGFRGTLTSPDTY 205 (267)
T ss_dssp STTSCCEEEEEEECCSSTTSCEEEEEEECSSTTSEEEEEEEETTSCCEEEEEEEEETTEE
T ss_pred cCCccccCCcceecccccccccccCCCCCCCCCEeeCCCCCeEEeCCCCccccccccccc
Confidence 1112357888888744 799999999999987654
No 23
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=98.41 E-value=2.7e-07 Score=84.49 Aligned_cols=91 Identities=21% Similarity=0.440 Sum_probs=68.3
Q ss_pred ccccccccccCCCCcccccccCcccCCCC-CCCCCCCCEEeCCCC--ceeeCCCCcCCCCCccccCCCCCCCCCCCCCCC
Q 005688 95 KAEIGRWLSGCDSVAKEVDLVEMIGGKSC-KSDCSGQGVCNHELG--QCRCFHGFRGKGCSERIHFQCNFPKTPELPYGR 171 (683)
Q Consensus 95 ~~~~g~~~~~c~~~~~~~~~~~~~~~~~C-~~~C~~~G~C~~~~G--~C~C~~G~~G~~Ce~~~~~~C~~~~~~~~~~g~ 171 (683)
....|.|...|+.++.+..+..+ .++| .++|.++|+|....| +|.|++||+|..|+.. .++|...
T Consensus 22 ~~~~g~~~C~C~~Gy~G~~C~~~--~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~-~~~C~~~--------- 89 (135)
T 2vj3_A 22 INTLGSFECQCLQGYTGPRCEID--VNECVSNPCQNDATCLDQIGEFQCICMPGYEGVHCEVN-TDECASS--------- 89 (135)
T ss_dssp EECSSSEEEECCTTEESTTSCEE--CCTTTTCCCCSSCEEEECSSCEEEECCTTEESSSSCEE-CCTTTTC---------
T ss_pred ECCCCCEEEECCCCCcCCccccc--CccCCCCCCCCCCEEeCCCCCceeeCCCCCcCCcceec-CCcccCC---------
Confidence 34567888999988876544333 3778 678999999987666 8999999999999864 4667643
Q ss_pred cccccCC--CcccCCCc--eEeeCCCcccCCCCC
Q 005688 172 WVVSICP--THCDTTRA--MCFCGEGTKYPNRPV 201 (683)
Q Consensus 172 ~~~~~C~--~~C~~~~g--~C~C~~G~~G~~C~~ 201 (683)
.|. +.|....+ .|.|++||+|..|+.
T Consensus 90 ----~C~~~g~C~~~~g~~~C~C~~G~~G~~C~~ 119 (135)
T 2vj3_A 90 ----PCLHNGRCLDKINEFQCECPTGFTGHLCQV 119 (135)
T ss_dssp ----CSTTTCEEEECSSCEEEECCTTEESSSSCE
T ss_pred ----CcCCCCEeECCCCCeEEECCCCCcCCccCc
Confidence 343 45655543 899999999988853
No 24
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=98.39 E-value=1.1e-07 Score=89.91 Aligned_cols=102 Identities=19% Similarity=0.311 Sum_probs=70.6
Q ss_pred cccccccccccCCCCcccccccCcccCCCC-CCCCCCC------CEEeCCCCcee-eCCCCcCCCCCccccCCCCCCCCC
Q 005688 94 WKAEIGRWLSGCDSVAKEVDLVEMIGGKSC-KSDCSGQ------GVCNHELGQCR-CFHGFRGKGCSERIHFQCNFPKTP 165 (683)
Q Consensus 94 ~~~~~g~~~~~c~~~~~~~~~~~~~~~~~C-~~~C~~~------G~C~~~~G~C~-C~~G~~G~~Ce~~~~~~C~~~~~~ 165 (683)
...+.|..++.|..++...+.........| +-.|+++ ++|+..+|+|. |.+||+|.+|+. |..+...
T Consensus 24 ~~g~~G~~Ce~C~~g~~g~~~~~~~~~~~C~~C~C~~~~~~~~~~~C~~~tG~C~~C~~g~~G~~Ce~-----C~~Gy~g 98 (162)
T 1klo_A 24 PTGTAGKRCELCDDGYFGDPLGSNGPVRLCRPCQCNDNIDPNAVGNCNRLTGECLKCIYNTAGFYCDR-----CKEGFFG 98 (162)
T ss_dssp CTTEESTTSCEECTTEEEETTCTTSSCEEEEECCSTTCBCTTCSCCBCTTTCCBCCBCTTEETTTTCE-----ECTTEEE
T ss_pred CCCCcCCCCcCCCCCCcCCcccccCCCCCCeeCcCCCCCCcccCCcccCCCCcccCCCCCCcCCCcCc-----CchhhcC
Confidence 345688889999888876654432222456 5567776 68998899995 999999999996 5544222
Q ss_pred CCCC----CCcccccCC--------CcccCCCceEeeCCCcccCCCC
Q 005688 166 ELPY----GRWVVSICP--------THCDTTRAMCFCGEGTKYPNRP 200 (683)
Q Consensus 166 ~~~~----g~~~~~~C~--------~~C~~~~g~C~C~~G~~G~~C~ 200 (683)
.... ..+....|. +.|+..+|+|.|.+||+|..|+
T Consensus 99 ~~~~~~~~~~C~~C~C~~~Gs~~~~~~Cd~~tG~C~C~~g~~G~~Cd 145 (162)
T 1klo_A 99 NPLAPNPADKCKACACNPYGTVQQQSSCNPVTGQCQCLPHVSGRDCG 145 (162)
T ss_dssp CTTCSSGGGSEEECCCCTTTBGGGCCCCCTTTCCCCBCTTEESTTCC
T ss_pred CccccCCCCCCeeccCCCCCccCCCCCCCCCCCEeECCCCCcCCCCC
Confidence 1111 223344454 2688889999999999998884
No 25
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=98.33 E-value=3e-07 Score=103.53 Aligned_cols=108 Identities=19% Similarity=0.305 Sum_probs=34.8
Q ss_pred CCceeeCCCCcCCCCCccccCCCCCCCCCCCC--CCCcccccC--------CCcccCCCceEeeCCCcccCCCCCCCCCC
Q 005688 137 LGQCRCFHGFRGKGCSERIHFQCNFPKTPELP--YGRWVVSIC--------PTHCDTTRAMCFCGEGTKYPNRPVAEACG 206 (683)
Q Consensus 137 ~G~C~C~~G~~G~~Ce~~~~~~C~~~~~~~~~--~g~~~~~~C--------~~~C~~~~g~C~C~~G~~G~~C~~~~~C~ 206 (683)
.+.|.|.+||.|..|+. |..+.....+ ...+....| .+.|+...|+|.|.+||.|..|+.
T Consensus 406 ~~~C~C~~g~~G~~C~~-----C~~Gy~G~~c~~~~~C~~C~C~~~gtc~~~~~Cd~~tg~C~C~~g~~G~~Ce~----- 475 (525)
T 4aqs_A 406 AGQCRCKLHVEGERCDV-----CKEGFYDLSAEDPYGCKSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQRCDQ----- 475 (525)
T ss_dssp SSCCCBCTTEETTTTCE-----ECTTEECCCTTSTTSSEECCCCTTTBCCSSCCBCTTTCCBCBCTTCCSTTTCC-----
T ss_pred CCccCCCCCCCCCcccC-----CCCCCcCCCCCCCCCCccCCCCCCceecCCCcccCCCCEEECCCCCcCCCccc-----
Confidence 35677777777777764 3332111100 111222223 145677788999999999998853
Q ss_pred CcccCCCCCCCCCCCCCccCCCC--CccCCCCCCCccccCCcccccccccccccccccCCCCCCCCCccc
Q 005688 207 FQVNLPSQPGAPKSTDWAKADLD--NIFTTNGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLLGQFCEV 274 (683)
Q Consensus 207 ~~~~~~~~~~~~C~~gw~g~~c~--~~~~~~C~~~G~C~~~~~~~~~~g~c~~g~C~C~~~G~~G~~C~~ 274 (683)
|.+|++|...+ .+.+.+|.++|.|...+.. .+|+|.|+ +||+|..|++
T Consensus 476 ------------C~~G~~g~~~~~~~C~~C~C~~~gs~~~~C~~-------~tG~C~C~-~G~~G~~Ceq 525 (525)
T 4aqs_A 476 ------------CLPQHWGLSNDLDGCRPCDCDLGGALNNSCSE-------DSGQCSCL-PHMIGRQCNE 525 (525)
T ss_dssp ----------------------------------------------------------------------
T ss_pred ------------CCCCccCCCCCCCCCcCCCCCCCCccCCccCC-------CCCeeECC-CCCcCCCCCC
Confidence 44555553221 1235667777776543221 36799999 9999999984
No 26
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=98.29 E-value=7.8e-07 Score=82.07 Aligned_cols=89 Identities=21% Similarity=0.494 Sum_probs=62.1
Q ss_pred ccccccCCCCcccccccCc----------ccCCCC-CCCCCCCCEEeC-------CCC--ceeeCCCCcCCCCCccccCC
Q 005688 99 GRWLSGCDSVAKEVDLVEM----------IGGKSC-KSDCSGQGVCNH-------ELG--QCRCFHGFRGKGCSERIHFQ 158 (683)
Q Consensus 99 g~~~~~c~~~~~~~~~~~~----------~~~~~C-~~~C~~~G~C~~-------~~G--~C~C~~G~~G~~Ce~~~~~~ 158 (683)
|.|...|+.++.+..+... ...++| +++|.++|+|.. ..+ +|.|++||+|..|+.. .++
T Consensus 21 g~~~C~C~~G~~G~~C~~~~~~~~~~~~c~~~~~C~~~~C~~~g~C~~~~~~~~~~~~~~~C~C~~G~~G~~C~~~-i~~ 99 (143)
T 4d90_A 21 GSFSCECPDGFTDPNCSSVVEVASDEEEPTSAGPCTPNPCHNGGTCEISEAYRGDTFIGYVCKCPRGFNGIHCQHN-INE 99 (143)
T ss_dssp -CCEEECCTTCCTTTTCSCCCCTTTTTSCCCCCTTSSCCCCTTCEEEECCCEETTEECCEEEECCTTEESTTSCEE-CCT
T ss_pred CCEEeECCCCCCCCCCccCccccccccccccCCcCCCCCCCCCCEecCCCccccCCCCCeEeECcCCCcCCCcccC-CCc
Confidence 5677777777765544321 123668 667999999983 222 8999999999999854 567
Q ss_pred CCCCCCCCCCCCCcccccCC--CcccCCCc--eEeeCCCcccCCCCC
Q 005688 159 CNFPKTPELPYGRWVVSICP--THCDTTRA--MCFCGEGTKYPNRPV 201 (683)
Q Consensus 159 C~~~~~~~~~~g~~~~~~C~--~~C~~~~g--~C~C~~G~~G~~C~~ 201 (683)
|... .|. +.|....+ .|.|.+||+|.+|..
T Consensus 100 C~~~-------------~C~~~~~C~~~~g~~~C~C~~G~~G~~c~~ 133 (143)
T 4d90_A 100 CEVE-------------PCKNGGICTDLVANYSCECPGEFMGRNCQY 133 (143)
T ss_dssp TTTC-------------CSCTTCEEEEETTEEEEECCTTCBSTTSCB
T ss_pred CCCC-------------CCCCCCEeECCCCCeEeECCCCCccCCcee
Confidence 7643 343 55665554 899999999998854
No 27
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=98.26 E-value=4.6e-07 Score=97.46 Aligned_cols=55 Identities=25% Similarity=0.485 Sum_probs=0.0
Q ss_pred cCCCCCccCCCCCCCccccCCcccccccccccccccccCCCCCCCCCccccCCCCcCCCCCCCceec--CCeeecCCC
Q 005688 225 KADLDNIFTTNGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLLGQFCEVPVSSTCVNQCSGHGHCR--GGFCQCDSG 300 (683)
Q Consensus 225 g~~c~~~~~~~C~~~G~C~~~~~~~~~~g~c~~g~C~C~~~G~~G~~C~~~~~~~C~~~C~~~G~C~--~g~C~C~~G 300 (683)
|..|+.. ..+|.|+|+|... .+|.|+ +||+|..|+.. .|.++|+|+ +|+|.=+.|
T Consensus 363 g~~CD~~-t~~C~ngg~C~~~------------~~C~C~-~G~~G~~Ce~c-------~C~~~g~C~~~~Gqc~~~~~ 419 (426)
T 3zyj_B 363 TNVCDNE-LLHCQNGGTCHNN------------VRCLCP-AAYTGILCEKL-------RCEEAGSCGSDSGQGAPPHG 419 (426)
T ss_dssp ------------------------------------------------------------------------------
T ss_pred cCccccC-cccCCCCCCcCCC------------CCCcCC-CCCcCCCCcCC-------CCCCCCcccCCCCccCCCCC
Confidence 4445422 3567788888542 289999 99999999853 377788896 666654433
No 28
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=98.25 E-value=4.1e-07 Score=77.36 Aligned_cols=50 Identities=36% Similarity=0.863 Sum_probs=40.2
Q ss_pred ccccccCCCCCCCCCcc-ccCCCCcC-CCCCCCceecC------CeeecCCCcccCCCCCCc
Q 005688 257 KEECDCKYDGLLGQFCE-VPVSSTCV-NQCSGHGHCRG------GFCQCDSGWYGVDCSIPS 310 (683)
Q Consensus 257 ~g~C~C~~~G~~G~~C~-~~~~~~C~-~~C~~~G~C~~------g~C~C~~G~~G~~C~~~~ 310 (683)
.++|.|+ +||+ .|+ .. ...|. ++|.++|+|++ .+|.|++||+|..|++.+
T Consensus 31 ~y~C~C~-~G~~--~C~~~~-~~~C~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~i 88 (91)
T 1tpg_A 31 VEYCWCN-SGRA--QCHSVP-VKSCSEPRCFNGGTCQQALYFSDFVCQCPEGFAGKSCEIDT 88 (91)
T ss_dssp EEEEECS-SSCC--BCCEEC-EEECSSCCSCTTCEEEEESSSSCEEEECCTTCBSSSCCBCS
T ss_pred CcEeECC-CCCc--ccccCc-CCcccCCCCCCCCEeecCCCCCCeEeECCCCCcCCcCCcCC
Confidence 5689998 9998 897 33 34564 68999999961 279999999999999754
No 29
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=98.24 E-value=6.8e-07 Score=76.00 Aligned_cols=84 Identities=18% Similarity=0.305 Sum_probs=54.8
Q ss_pred ceeeCCCCcCCCCCccccCCCCCCCCCCCCCCCcccccCCCcccCCCceEeeCCCcccCCCC-C-CCCCCCcccCCCCCC
Q 005688 139 QCRCFHGFRGKGCSERIHFQCNFPKTPELPYGRWVVSICPTHCDTTRAMCFCGEGTKYPNRP-V-AEACGFQVNLPSQPG 216 (683)
Q Consensus 139 ~C~C~~G~~G~~Ce~~~~~~C~~~~~~~~~~g~~~~~~C~~~C~~~~g~C~C~~G~~G~~C~-~-~~~C~~~~~~~~~~~ 216 (683)
+|.|.+||+|..|+.. +|.. .+|... .....|.|.+||+ .|+ . .+.
T Consensus 3 ~C~C~~g~~g~~c~~~---~c~~-------------~pC~n~--~~~y~C~C~~G~~--~C~~~~~~~------------ 50 (91)
T 1tpg_A 3 QVICRDEKTQMIYQQH---QSWL-------------RPVLRS--NRVEYCWCNSGRA--QCHSVPVKS------------ 50 (91)
T ss_dssp CCCCBCSSSCCBCCSS---CEEE-------------EECSSS--SCEEEEECSSSCC--BCCEECEEE------------
T ss_pred eeECCCCCcCCeECCC---cccC-------------CccccC--CCCcEeECCCCCc--ccccCcCCc------------
Confidence 6899999999999743 3432 123211 1124899999997 553 1 111
Q ss_pred CCCCCCCccCCCCCccCCCCCCCccccCCcccccccccccccccccCCCCCCCCCccccC
Q 005688 217 APKSTDWAKADLDNIFTTNGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLLGQFCEVPV 276 (683)
Q Consensus 217 ~~C~~gw~g~~c~~~~~~~C~~~G~C~~~~~~~~~~g~c~~g~C~C~~~G~~G~~C~~~~ 276 (683)
|. .++|.++|.|...... ..++|.|+ +||+|..|++.+
T Consensus 51 -----------C~---~~pC~ngg~C~~~~~~-------~~~~C~C~-~G~~G~~Ce~~i 88 (91)
T 1tpg_A 51 -----------CS---EPRCFNGGTCQQALYF-------SDFVCQCP-EGFAGKSCEIDT 88 (91)
T ss_dssp -----------CS---SCCSCTTCEEEEESSS-------SCEEEECC-TTCBSSSCCBCS
T ss_pred -----------cc---CCCCCCCCEeecCCCC-------CCeEeECC-CCCcCCcCCcCC
Confidence 21 4668899999653200 15689999 999999999753
No 30
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=98.13 E-value=2.3e-06 Score=75.92 Aligned_cols=67 Identities=28% Similarity=0.789 Sum_probs=48.3
Q ss_pred CCCCCCCCCCCEEeCCCC--ceeeCCCCcCCCCCccc-cCCCCCCCCCCCCCCCcccccCCCcccCCCc--eEeeCCCcc
Q 005688 121 KSCKSDCSGQGVCNHELG--QCRCFHGFRGKGCSERI-HFQCNFPKTPELPYGRWVVSICPTHCDTTRA--MCFCGEGTK 195 (683)
Q Consensus 121 ~~C~~~C~~~G~C~~~~G--~C~C~~G~~G~~Ce~~~-~~~C~~~~~~~~~~g~~~~~~C~~~C~~~~g--~C~C~~G~~ 195 (683)
.+|...|.++|+|....| +|.|++||+|..|+... .++|.... ..|...|....| .|.|.+||+
T Consensus 16 ~~C~~~C~~~g~C~~~~~~y~C~C~~G~~G~~C~~~~~~~~C~~~~-----------~~C~~~C~n~~g~y~C~C~~G~~ 84 (114)
T 1aut_L 16 HPCASLCCGHGTCIDGIGSFSCDCRSGWEGRFCQREVSFLNCSLDN-----------GGCTHYCLEEVGWRRCSCAPGYK 84 (114)
T ss_dssp CSSSSTTTTSEEECCCSSCCCEEECTTEESTTSCEECCSSSSSSGG-----------GGCSSEEEECSSSEEEECCTTEE
T ss_pred ccccccCCCcCCCCCCCCCcEeeCCCCCcCCCcCcCCcCCcCcCCC-----------CCCCCEeECCCCCEEeECCCCee
Confidence 346566999999986555 89999999999999742 23565321 135556766544 899999999
Q ss_pred cCC
Q 005688 196 YPN 198 (683)
Q Consensus 196 G~~ 198 (683)
|..
T Consensus 85 ~~~ 87 (114)
T 1aut_L 85 LGD 87 (114)
T ss_dssp ECT
T ss_pred ECC
Confidence 644
No 31
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=98.09 E-value=1.2e-06 Score=86.69 Aligned_cols=63 Identities=30% Similarity=0.694 Sum_probs=50.5
Q ss_pred CCCCCCCccccCCcccccccccccccccccCCCCCCCCCccccCC--------CCcC-----CCCCCCceecCCeeecCC
Q 005688 233 TTNGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLLGQFCEVPVS--------STCV-----NQCSGHGHCRGGFCQCDS 299 (683)
Q Consensus 233 ~~~C~~~G~C~~~~~~~~~~g~c~~g~C~C~~~G~~G~~C~~~~~--------~~C~-----~~C~~~G~C~~g~C~C~~ 299 (683)
+..|+++|.| +.+.|.|. +||+|.+|+.+.. ..|. ..|+++|+|+.++|.|.+
T Consensus 95 ~~~Csg~G~C-------------~~g~C~C~-~G~~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Csg~G~C~~g~C~C~~ 160 (217)
T 2p28_B 95 RSLCHGKGFL-------------ECGICRCD-TGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCGQCLCHT 160 (217)
T ss_dssp -CTTTTSEEE-------------ETTEEEEC-TTEESTTSCEECCCCC-GGGGGGGBSSTTSCBGGGTEEEETTEEEECC
T ss_pred CCccCCCceE-------------ECCEEECC-CCccCCcccccCcccccccCCCcCCCCCCCCCCCCCCEEeCCceECCC
Confidence 3457788888 36899998 9999999996531 1354 469999999999999999
Q ss_pred C------cccCCCCCC
Q 005688 300 G------WYGVDCSIP 309 (683)
Q Consensus 300 G------~~G~~C~~~ 309 (683)
| |+|..|+..
T Consensus 161 gw~~~~~~~G~~Ce~~ 176 (217)
T 2p28_B 161 SDVPGKLIYGQYCECD 176 (217)
T ss_dssp CCSTTCCEESTTSCEE
T ss_pred CCCCcccEECCCcccC
Confidence 9 699999953
No 32
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=98.05 E-value=4.8e-07 Score=85.54 Aligned_cols=127 Identities=24% Similarity=0.520 Sum_probs=74.2
Q ss_pred CCC--CCCCCCCCEEeCCCC--ceeeCCCCc----CCCCCccccCCCCCCCCCCCCCCCcccccCCCcccCC------Cc
Q 005688 121 KSC--KSDCSGQGVCNHELG--QCRCFHGFR----GKGCSERIHFQCNFPKTPELPYGRWVVSICPTHCDTT------RA 186 (683)
Q Consensus 121 ~~C--~~~C~~~G~C~~~~G--~C~C~~G~~----G~~Ce~~~~~~C~~~~~~~~~~g~~~~~~C~~~C~~~------~g 186 (683)
++| +++|. +|+|....| +|.|++||+ |..|+.....+|.....+.. ....+.|... ..
T Consensus 4 deC~~~~~C~-~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~d~~~~~C~~~~~~c~-------~~~~~~C~~~~~~~~~~~ 75 (162)
T 1uzk_A 4 NECLDPTTCI-SGNCVNTPGSYICDCPPDFELNPTRVGCVDTRSGNCYLDIRPRG-------DNGDTACSNEIGVGVSKA 75 (162)
T ss_dssp CGGGSTTSSB-TSEEEEETTEEEEECCTTCEECTTSSBEECCCCEEEEEEC-----------------CEEEEEEEECHH
T ss_pred ccCCCCCCCC-CCEeECCCCCEEEeCCCCCeECCCCCcccCCCCCcccCCCcccC-------CCCCCcccCCcCCcccCc
Confidence 677 37796 799987777 899999998 88998431123643211000 0012344433 23
Q ss_pred eEeeCCCcc-cCCCCCCCCCCCcccCCCCCCCCCCCCCccCCCCCccCCCCCCCccccCCcccccccccccccccccCCC
Q 005688 187 MCFCGEGTK-YPNRPVAEACGFQVNLPSQPGAPKSTDWAKADLDNIFTTNGSKPGWCNVDPEEAYALKVQFKEECDCKYD 265 (683)
Q Consensus 187 ~C~C~~G~~-G~~C~~~~~C~~~~~~~~~~~~~C~~gw~g~~c~~~~~~~C~~~G~C~~~~~~~~~~g~c~~g~C~C~~~ 265 (683)
.|.|..||. |..| + .|..... ..++|.|+ +
T Consensus 76 ~C~C~~G~~~~~~C-----------------------------~-----------~C~~~~~--------~~y~C~C~-~ 106 (162)
T 1uzk_A 76 SCCCSLGKAWGTPC-----------------------------E-----------MCPAVNT--------SEYKILCP-G 106 (162)
T ss_dssp HHHTTTCCEETTTT-----------------------------E-----------ECCCTTS--------HHHHHHCT-T
T ss_pred eeeCCCCCCcCCCc-----------------------------c-----------cCCCCCC--------CCceeECC-C
Confidence 677888876 3222 1 1111100 15689997 7
Q ss_pred --CCCCCC---ccccCCCCcC---CCCCCCceec----CCeeecCCCcccCCC
Q 005688 266 --GLLGQF---CEVPVSSTCV---NQCSGHGHCR----GGFCQCDSGWYGVDC 306 (683)
Q Consensus 266 --G~~G~~---C~~~~~~~C~---~~C~~~G~C~----~g~C~C~~G~~G~~C 306 (683)
||+|.. +.+. ++.|. +.|.+ |+|+ ..+|.|++||+|..-
T Consensus 107 g~G~~~~~~~~~c~d-ideC~~~~~~C~~-g~C~n~~gsy~C~C~~Gy~g~~d 157 (162)
T 1uzk_A 107 GEGFRPNPITVILED-IDECQELPGLCQG-GKCINTFGSFQCRCPTGYYLNED 157 (162)
T ss_dssp CTTEEECTTTCCEEE-CCHHHHCGGGGBT-SEEEECSSCEEEECCTTCCBCTT
T ss_pred CCCcccCCCCCccCc-cccccCCCCCcCC-CEeEcCCCCEEeeCCCCccCCCC
Confidence 998862 2222 35674 35874 7997 348999999998753
No 33
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=98.00 E-value=4.9e-07 Score=84.05 Aligned_cols=45 Identities=31% Similarity=0.560 Sum_probs=34.8
Q ss_pred ccccccCCCCCC---CCCccccCCCCcC---CCCCCCceec----CCeeecCCCcccCC
Q 005688 257 KEECDCKYDGLL---GQFCEVPVSSTCV---NQCSGHGHCR----GGFCQCDSGWYGVD 305 (683)
Q Consensus 257 ~g~C~C~~~G~~---G~~C~~~~~~~C~---~~C~~~G~C~----~g~C~C~~G~~G~~ 305 (683)
.+.|.|+ +||+ |..|+. .+.|. ..|.+ |+|+ ..+|.|++||+|..
T Consensus 87 ~~~C~C~-~Gy~~~~g~~C~d--ideC~~~~~~C~~-g~C~n~~g~y~C~C~~Gy~g~~ 141 (147)
T 2w86_A 87 QVDPICG-KGYSRIKGTQCED--IDECEVFPGVCKN-GLCVNTRGSFKCQCPSGMTLDA 141 (147)
T ss_dssp CCCTTTC-TTEEEEETTEEEE--CCHHHHSTTCSSS-SEEEEETTEEEEECCTTCCBCT
T ss_pred CCcccCC-CccccCCCCccCc--cccccCCCCCCCC-CEEECCCCCEEeeCCCCCccCC
Confidence 3678999 9995 999973 45774 45984 6997 33899999999875
No 34
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=97.94 E-value=4.6e-06 Score=77.34 Aligned_cols=66 Identities=27% Similarity=0.804 Sum_probs=50.0
Q ss_pred CCC-CCCCCCCCEEeCCCC--ceeeCCCCcCCCCCccccCCCCCCCCCCCCCCCcccccCCCcc-cCCCc--eEeeCCCc
Q 005688 121 KSC-KSDCSGQGVCNHELG--QCRCFHGFRGKGCSERIHFQCNFPKTPELPYGRWVVSICPTHC-DTTRA--MCFCGEGT 194 (683)
Q Consensus 121 ~~C-~~~C~~~G~C~~~~G--~C~C~~G~~G~~Ce~~~~~~C~~~~~~~~~~g~~~~~~C~~~C-~~~~g--~C~C~~G~ 194 (683)
++| +++|.++|+|....| .|.|++||+|..|+.. ++|.... ..|...| ....| .|.|++||
T Consensus 49 deC~~~pC~n~g~C~~~~~~y~C~C~~G~~G~~C~~~--deC~~~~-----------~~C~~~C~~n~~g~y~C~C~~Gy 115 (146)
T 1x7a_L 49 DQCEPNPCLNGGLCKDDINSYECWCQVGFEGKNCELD--ATCNIKN-----------GRCKQFCKTGADSKVLCSCTTGY 115 (146)
T ss_dssp -CCSSCSSCTTCEEEECSSCEEEECCSSEESTTTCEE--CCTTSGG-----------GSCSSBCCCCSSSCCCCBCCTTE
T ss_pred CcCCCCCCCCCCEeECCCCCEEEecCCCCcCCcCCCC--ccccCCC-----------CCCcCCCCCCCCCCEEeEcCCCc
Confidence 678 788999999987666 8999999999999874 6776531 1455667 55544 89999999
Q ss_pred c----cCCC
Q 005688 195 K----YPNR 199 (683)
Q Consensus 195 ~----G~~C 199 (683)
+ |..|
T Consensus 116 ~l~~dG~~C 124 (146)
T 1x7a_L 116 RLAPDQKSC 124 (146)
T ss_dssp EECTTSSSE
T ss_pred EeCCCCCcC
Confidence 8 5555
No 35
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=97.88 E-value=2.1e-06 Score=76.66 Aligned_cols=99 Identities=26% Similarity=0.498 Sum_probs=61.3
Q ss_pred CCC-CCCCCCCCEEeCC-CC--ceeeCCCCcCCCCCccc-cCCCCCCCCCCCCCCCcccccCCCcccCC-CceEeeCCCc
Q 005688 121 KSC-KSDCSGQGVCNHE-LG--QCRCFHGFRGKGCSERI-HFQCNFPKTPELPYGRWVVSICPTHCDTT-RAMCFCGEGT 194 (683)
Q Consensus 121 ~~C-~~~C~~~G~C~~~-~G--~C~C~~G~~G~~Ce~~~-~~~C~~~~~~~~~~g~~~~~~C~~~C~~~-~g~C~C~~G~ 194 (683)
++| +++|.+ +|... .| +|.|++||+|..++... ..+|.. ..|.+.|... ...|.|++||
T Consensus 5 deC~~~pC~~--~C~~~~~g~y~C~C~~Gy~g~~~~~~~C~~~C~~-------------~~C~~~C~~~~~y~C~C~~Gy 69 (118)
T 1dx5_I 5 DPCFRANCEY--QCQPLDQTSYLCVCAEGFAPIPHEPHRCQMFCNQ-------------TACPADCDPNTQASCECPEGY 69 (118)
T ss_dssp CGGGGCCCSS--EEEECSSSCEEEECCTTEEEETTEEEEEEECCCS-------------SEEECEECTTSTTCEECCTTE
T ss_pred ccCCCCCCCC--CCCCCCCCCEEeECCCCccccCCCCCccccccCC-------------CCCCCcccCCCCeEeECCCCc
Confidence 667 677874 99876 44 89999999998664321 112322 2455556553 2489999999
Q ss_pred c---cCCCCCCCCCCCcccCCCCCCCCCCCCCccCCCCCccCCCCCCCccccCCcccccccccccccccccCCCCCCCCC
Q 005688 195 K---YPNRPVAEACGFQVNLPSQPGAPKSTDWAKADLDNIFTTNGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLLGQF 271 (683)
Q Consensus 195 ~---G~~C~~~~~C~~~~~~~~~~~~~C~~gw~g~~c~~~~~~~C~~~G~C~~~~~~~~~~g~c~~g~C~C~~~G~~G~~ 271 (683)
+ |..|...+.| .. ..+| .+.|.+... .++|.|+ +||+|..
T Consensus 70 ~~~~g~~C~dideC-----------------------~~--~~~C--~~~C~n~~g---------~y~C~C~-~G~~g~~ 112 (118)
T 1dx5_I 70 ILDDGFICTDIDEC-----------------------EN--GGFC--SGVCHNLPG---------TFECICG-PDSALAG 112 (118)
T ss_dssp EEETTTEEEECCHH-----------------------HH--CSSC--SSEEEECSS---------SEEEEEC-SSSSCEE
T ss_pred cCCCCCcccccccc-----------------------CC--CCCC--cCeEEeCCC---------CEEEECC-CCCccCC
Confidence 9 5555211111 10 1445 567755432 5799998 9999754
No 36
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=97.85 E-value=2.4e-06 Score=82.85 Aligned_cols=68 Identities=31% Similarity=0.790 Sum_probs=21.3
Q ss_pred CCC-CCCCCCCCEEeCCCC--ceeeCCCCcCCCCCccccCCCCCCCCCCCCCCCcccccCCCcccCCCc--eEeeCCCcc
Q 005688 121 KSC-KSDCSGQGVCNHELG--QCRCFHGFRGKGCSERIHFQCNFPKTPELPYGRWVVSICPTHCDTTRA--MCFCGEGTK 195 (683)
Q Consensus 121 ~~C-~~~C~~~G~C~~~~G--~C~C~~G~~G~~Ce~~~~~~C~~~~~~~~~~g~~~~~~C~~~C~~~~g--~C~C~~G~~ 195 (683)
++| +++|.++|+|....| .|.|++||+|..|+..+.++|.... ..|...|....| .|.|.+||+
T Consensus 43 deC~~~pC~ngg~C~n~~g~y~C~C~~Gf~G~~Ce~~i~deC~~~~-----------~~C~~~C~n~~gsy~C~C~~Gy~ 111 (195)
T 1nfu_B 43 DQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTRKLCSLDN-----------GDCDQFCHEEQNSVVCSCARGYT 111 (195)
T ss_dssp --------------------------------------CCGGGTGG-----------GGCSSEEEEETTEEEEECCTTEE
T ss_pred cccCCCCCCCCCEeECCCCCeeEeCCCCceeccccccccccccCCC-----------CCCCCEeECCCCCeEEECCCCce
Confidence 678 788999999986555 8999999999999974225676521 246666766554 899999998
Q ss_pred ----cCCC
Q 005688 196 ----YPNR 199 (683)
Q Consensus 196 ----G~~C 199 (683)
|..|
T Consensus 112 l~~dG~~C 119 (195)
T 1nfu_B 112 LADNGKAC 119 (195)
T ss_dssp ECTTSSCE
T ss_pred eCCCCCcc
Confidence 5555
No 37
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=97.79 E-value=3.8e-06 Score=92.82 Aligned_cols=66 Identities=26% Similarity=0.642 Sum_probs=29.8
Q ss_pred cccCCCCCCCCCCCCEEeCCCCceeeCCCCcCCCCCccccCCCCCCCCCCCCCCCcccccCC--CcccCCCceEeeCCCc
Q 005688 117 MIGGKSCKSDCSGQGVCNHELGQCRCFHGFRGKGCSERIHFQCNFPKTPELPYGRWVVSICP--THCDTTRAMCFCGEGT 194 (683)
Q Consensus 117 ~~~~~~C~~~C~~~G~C~~~~G~C~C~~G~~G~~Ce~~~~~~C~~~~~~~~~~g~~~~~~C~--~~C~~~~g~C~C~~G~ 194 (683)
.|....|..+|.| |+|+. .++|.|++||+|..|+.. .|.. .|. +.|... +.|.|.+||
T Consensus 389 ~c~~~~C~~~C~n-G~C~~-~~~C~C~~G~~G~~C~~~---~C~~--------------~C~~~g~C~~~-~~C~C~~G~ 448 (463)
T 2wg3_C 389 QTLTSECSRLCRN-GYCTP-TGKCCCSPGWEGDFCRTA---KCEP--------------ACRHGGVCVRP-NKCLCKKGY 448 (463)
T ss_dssp CCCCCHHHHHCCS-EEECT-TSCEEECTTEESTTSCEE---CC-------------------------------------
T ss_pred CCccccccCCCCC-CccCC-CCeECCCCCcCCCcCCcC---cCCC--------------CCCCCCEECCC-CEEECCCCc
Confidence 4445677557986 99985 579999999999999854 4543 354 344432 689999999
Q ss_pred ccCCCCCC
Q 005688 195 KYPNRPVA 202 (683)
Q Consensus 195 ~G~~C~~~ 202 (683)
+|..|+..
T Consensus 449 ~G~~C~~~ 456 (463)
T 2wg3_C 449 LGPQCEQV 456 (463)
T ss_dssp --------
T ss_pred ccCCCCCC
Confidence 99988654
No 38
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=97.79 E-value=1.1e-05 Score=91.52 Aligned_cols=95 Identities=21% Similarity=0.488 Sum_probs=63.4
Q ss_pred CcccCCC---ceE-eeCCCccc--CCCCCCCCCCCcccCCCCCCCCCCCCCccCCCCCccCCCCCCCc---cccCCcccc
Q 005688 179 THCDTTR---AMC-FCGEGTKY--PNRPVAEACGFQVNLPSQPGAPKSTDWAKADLDNIFTTNGSKPG---WCNVDPEEA 249 (683)
Q Consensus 179 ~~C~~~~---g~C-~C~~G~~G--~~C~~~~~C~~~~~~~~~~~~~C~~gw~g~~c~~~~~~~C~~~G---~C~~~~~~~ 249 (683)
+.|.... ..| .|++||+| ..|+....|. ..+..|.+++ .|.....
T Consensus 15 g~C~n~~~Gsy~C~~C~~GytGdg~~CeDiDEC~------------------------~~p~~C~~gg~~~~CvNt~g-- 68 (634)
T 1yo8_A 15 AQCSSFPDGSWSCGFCPVGFLGNGTHCEDLDECA------------------------LVPDICFSTSKVPRCVNTQP-- 68 (634)
T ss_dssp CCEEECTTSCEEECCCCTTBCSCSSSCCBCCTTT------------------------TSCCCSCCCSSSCCEEECSS--
T ss_pred CEEecCCCCCeECCcCCCccCCCCCCcccccccc------------------------CCCCcccCCccccceeeccC--
Confidence 4565543 489 99999998 5553222221 0022367777 7855432
Q ss_pred cccccccccccc-cCCCCCCCCCccc-------------cCCCCcC---CCCCCCceec--C----C--eeecCCCccc-
Q 005688 250 YALKVQFKEECD-CKYDGLLGQFCEV-------------PVSSTCV---NQCSGHGHCR--G----G--FCQCDSGWYG- 303 (683)
Q Consensus 250 ~~~g~c~~g~C~-C~~~G~~G~~C~~-------------~~~~~C~---~~C~~~G~C~--~----g--~C~C~~G~~G- 303 (683)
.++|. |+ +||+|..|+. .....|. ++|.++++|+ . + +|.|++||+|
T Consensus 69 -------sY~C~~C~-~Gy~G~~c~g~g~~~~~~dg~~C~dideC~~~~~pC~~~~~Cvnt~~~~~GsY~C~C~~Gy~Gd 140 (634)
T 1yo8_A 69 -------GFHCLPCP-PRYRGNQPVGVGLEAAKTEKQVCEPENPCKDKTHNCHKHAECIYLGHFSDPMYKCECQTGYAGD 140 (634)
T ss_dssp -------SEEECCCC-TTEEECCCEESSSHHHHSCCCCEEECCTTTTTCCCCCTTEEEEECCTTCSSSEEEEECTTEEES
T ss_pred -------ceecccCC-CCcccCccccccccccccCCCcccccccccCCCcccccCccccccccccccceeeeccCCcccc
Confidence 57998 99 9999998761 1135675 4799999996 2 2 7999999998
Q ss_pred -CCCC
Q 005688 304 -VDCS 307 (683)
Q Consensus 304 -~~C~ 307 (683)
..|+
T Consensus 141 G~~Ce 145 (634)
T 1yo8_A 141 GLICG 145 (634)
T ss_dssp SSSEE
T ss_pred Ccccc
Confidence 6775
No 39
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=97.74 E-value=4.5e-06 Score=76.24 Aligned_cols=68 Identities=31% Similarity=0.790 Sum_probs=21.2
Q ss_pred CCC-CCCCCCCCEEeCCCC--ceeeCCCCcCCCCCccccCCCCCCCCCCCCCCCcccccCCCcccCCCc--eEeeCCCcc
Q 005688 121 KSC-KSDCSGQGVCNHELG--QCRCFHGFRGKGCSERIHFQCNFPKTPELPYGRWVVSICPTHCDTTRA--MCFCGEGTK 195 (683)
Q Consensus 121 ~~C-~~~C~~~G~C~~~~G--~C~C~~G~~G~~Ce~~~~~~C~~~~~~~~~~g~~~~~~C~~~C~~~~g--~C~C~~G~~ 195 (683)
++| +++|.++|+|....+ .|.|++||+|..|+..+.++|.... ..|...|....| .|.|.+||+
T Consensus 43 d~C~~~pC~n~g~C~~~~~~y~C~C~~G~~G~~C~~~i~d~C~~~~-----------~~C~~~C~~~~g~y~C~C~~Gy~ 111 (134)
T 2vh0_B 43 DQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTRKLCSLDN-----------GDCDQFCHEEQNSVVCSCARGYT 111 (134)
T ss_dssp --------------------------------------CCGGGTGG-----------GGCSSEEEEETTEEEEECCTTEE
T ss_pred CcCCCCCCCCcCCcccCCCCEEeeCCCCccCCccccCCCCccccCC-----------CCCCCEeECCCCCEEEECCCCcE
Confidence 678 678999999986555 8999999999999974225676421 145566665544 899999999
Q ss_pred ----cCCC
Q 005688 196 ----YPNR 199 (683)
Q Consensus 196 ----G~~C 199 (683)
|..|
T Consensus 112 l~~~g~~C 119 (134)
T 2vh0_B 112 LADNGKAC 119 (134)
T ss_dssp ECTTSSCE
T ss_pred ECCCCCcc
Confidence 6665
No 40
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=97.63 E-value=2.9e-05 Score=71.56 Aligned_cols=71 Identities=24% Similarity=0.544 Sum_probs=49.2
Q ss_pred CCC-CCCCCCCCEEeCCCC--ceeeCCCCcCCCCCccccCCCCCCCCCCCCCCCcccccCCCcccCCCc---eEeeCCCc
Q 005688 121 KSC-KSDCSGQGVCNHELG--QCRCFHGFRGKGCSERIHFQCNFPKTPELPYGRWVVSICPTHCDTTRA---MCFCGEGT 194 (683)
Q Consensus 121 ~~C-~~~C~~~G~C~~~~G--~C~C~~G~~G~~Ce~~~~~~C~~~~~~~~~~g~~~~~~C~~~C~~~~g---~C~C~~G~ 194 (683)
++| +++|.++|+|....| .|.|++||+|..|+.. .++|..... ....|...|....| .|.|.+||
T Consensus 48 d~C~~~pC~n~g~C~~~~g~y~C~C~~G~~G~~C~~~-~~~c~~c~~--------~~~~C~~~C~~~~g~~y~C~C~~Gy 118 (142)
T 2c4f_L 48 DQCASSPCQNGGSCKDQLQSYICFCLPAFEGRNCETH-KDDQLICVN--------ENGGCEQYCSDHTGTKRSCRCHEGY 118 (142)
T ss_dssp CGGGGCCCCTTCEEEEETTEEEEECCTTEESTTSCEE-GGGCCSTTT--------GGGGCSSEEECCTTSCCEEECCTTE
T ss_pred CcCcCCCcCCCCEEeCCCCCEEeeCCCCccCCccccC-ccccccccC--------CCCCccCEeECCCCCCEEEECCCCc
Confidence 678 788999999987666 8999999999999963 233321000 01134446655543 89999999
Q ss_pred c----cCCCC
Q 005688 195 K----YPNRP 200 (683)
Q Consensus 195 ~----G~~C~ 200 (683)
+ |..|.
T Consensus 119 ~l~~dG~~C~ 128 (142)
T 2c4f_L 119 SLLADGVSCT 128 (142)
T ss_dssp EECTTSSCEE
T ss_pred eECCCCCCCC
Confidence 9 66663
No 41
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=97.62 E-value=4.6e-05 Score=79.81 Aligned_cols=67 Identities=25% Similarity=0.725 Sum_probs=50.6
Q ss_pred CCCC-CCCCCCCCEEeCCCC--ceeeCCCCcCCCCCccccCCCCCCCCCCCCCCCcccccCCCcccCCCc--eEeeCCCc
Q 005688 120 GKSC-KSDCSGQGVCNHELG--QCRCFHGFRGKGCSERIHFQCNFPKTPELPYGRWVVSICPTHCDTTRA--MCFCGEGT 194 (683)
Q Consensus 120 ~~~C-~~~C~~~G~C~~~~G--~C~C~~G~~G~~Ce~~~~~~C~~~~~~~~~~g~~~~~~C~~~C~~~~g--~C~C~~G~ 194 (683)
.++| +++|.++|+|....+ .|.|++||+|..|+.. .++|..... ..|...|.+..| .|.|.+||
T Consensus 5 ~~~C~~~pC~~~g~C~~~~~~~~C~C~~g~~g~~C~~~-~~eC~~~~~----------~~C~~~C~~~~g~~~C~C~~g~ 73 (317)
T 3h5c_B 5 GSPCISQPCLHNGSCQDSIWGYTCTCSPGYEGSNCELA-KNECHPERT----------DGCQHFCLPGQESYTCSCAQGY 73 (317)
T ss_dssp -CCTTSCCCTTTCCCCCCSSSCCCCCSSSCCSSSSCCC-SSSCCTTCT----------TSCSSEEECCSSSCEEECCTTE
T ss_pred CCcCCCCCCCCCCEeECCCCCeEEECCCCCcCCccccC-cccCCCCCC----------CCCcCccccCCCeeEEeccccc
Confidence 3678 788999999986544 8999999999999954 578875211 256667766544 89999999
Q ss_pred ccC
Q 005688 195 KYP 197 (683)
Q Consensus 195 ~G~ 197 (683)
.|.
T Consensus 74 ~~~ 76 (317)
T 3h5c_B 74 RLG 76 (317)
T ss_dssp ECC
T ss_pred ccc
Confidence 874
No 42
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=97.55 E-value=4e-05 Score=58.24 Aligned_cols=34 Identities=26% Similarity=0.598 Sum_probs=28.4
Q ss_pred CCC-CCCCCCCCEEeC-----CC-C-ceeeCCCCcCCCCCcc
Q 005688 121 KSC-KSDCSGQGVCNH-----EL-G-QCRCFHGFRGKGCSER 154 (683)
Q Consensus 121 ~~C-~~~C~~~G~C~~-----~~-G-~C~C~~G~~G~~Ce~~ 154 (683)
++| +++|.|+|+|.. .. + +|.|++||+|.+||..
T Consensus 9 ~eC~s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~~CE~~ 50 (55)
T 3u7u_G 9 AEKEKTFCVNGGECFMVKDLSNPSRYLCKCPNEFTGDRCQNY 50 (55)
T ss_dssp CSTTTTTSCTTCEEEEECCC--CCCEEEEECTTEESTTSCEE
T ss_pred CCCcCCCCCCCCCcCCCCccCCCCCEeEeCCCCCcCCCcCcc
Confidence 889 889999999942 12 2 8999999999999975
No 43
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=97.55 E-value=4e-05 Score=58.23 Aligned_cols=42 Identities=21% Similarity=0.430 Sum_probs=31.9
Q ss_pred CCCccccCCCCc-CCCCCCCceec---------CCeeecCCCcccCCCCCCcc
Q 005688 269 GQFCEVPVSSTC-VNQCSGHGHCR---------GGFCQCDSGWYGVDCSIPSV 311 (683)
Q Consensus 269 G~~C~~~~~~~C-~~~C~~~G~C~---------~g~C~C~~G~~G~~C~~~~~ 311 (683)
|..|++.+ +.| .++|.|+|+|. ..+|.|.+||+|..|+..+.
T Consensus 1 G~~c~~~~-~eC~s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~~CE~~v~ 52 (55)
T 3u7u_G 1 GTSHLVKC-AEKEKTFCVNGGECFMVKDLSNPSRYLCKCPNEFTGDRCQNYVM 52 (55)
T ss_dssp --CCEEEC-CSTTTTTSCTTCEEEEECCC--CCCEEEEECTTEESTTSCEECC
T ss_pred CCCCcccC-CCCcCCCCCCCCCcCCCCccCCCCCEeEeCCCCCcCCCcCccCc
Confidence 56777764 455 47999999993 23899999999999998664
No 44
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=97.54 E-value=1.5e-05 Score=90.31 Aligned_cols=51 Identities=31% Similarity=0.713 Sum_probs=45.5
Q ss_pred cccCCCCCCCCCccccCCCCcCCCCCCCceecCCeeecCCCcccCCCCCCccCC
Q 005688 260 CDCKYDGLLGQFCEVPVSSTCVNQCSGHGHCRGGFCQCDSGWYGVDCSIPSVMS 313 (683)
Q Consensus 260 C~C~~~G~~G~~C~~~~~~~C~~~C~~~G~C~~g~C~C~~G~~G~~C~~~~~~~ 313 (683)
..|. +||+|++|.+ ...|+..|++||.|+.|+|.|.+||+|.+|+.+.++.
T Consensus 520 ~~C~-~gw~g~dc~i--~~~Cp~~C~ghG~C~~G~C~Cd~G~~G~~C~~~~~~~ 570 (725)
T 2e26_A 520 FDKQ-QTWAIDNVYI--GDGCLDMCSGHGRCVQGSCVCDEQWGGLYCDEPETSL 570 (725)
T ss_dssp CCTT-CCEEEEEEEE--ESCSSGGGGGSEEEETTEEEECTTEESTTSCEESSCC
T ss_pred CccC-CCcccccccc--cCCCCcccCCCcEECCCCEeeCCCccCCCcCccCCCC
Confidence 4798 9999999994 2489999999999999999999999999999876643
No 45
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=97.50 E-value=6.7e-05 Score=52.72 Aligned_cols=33 Identities=33% Similarity=0.987 Sum_probs=28.6
Q ss_pred CCC-CCCCCCCCEEeCCCC--ceeeCCCCcCCCCCc
Q 005688 121 KSC-KSDCSGQGVCNHELG--QCRCFHGFRGKGCSE 153 (683)
Q Consensus 121 ~~C-~~~C~~~G~C~~~~G--~C~C~~G~~G~~Ce~ 153 (683)
++| +++|.++|+|....+ +|.|++||+|..|+.
T Consensus 4 d~C~~~pC~ngg~C~~~~~~~~C~C~~G~~G~~Ce~ 39 (39)
T 1edm_B 4 DQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCEL 39 (39)
T ss_dssp CTTTTCCCCTTCEEEEETTEEEEECCTTCCSTTSCC
T ss_pred ccCCCCCCCCCCEeEcCCCceEeECCCCCcCCccCC
Confidence 678 788999999986556 899999999999973
No 46
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=97.36 E-value=7.8e-05 Score=80.17 Aligned_cols=43 Identities=19% Similarity=0.532 Sum_probs=0.0
Q ss_pred CCCCCCccccCCCCcCCCCCCCceec-CCeeecCCCcccCCCCCCccCC
Q 005688 266 GLLGQFCEVPVSSTCVNQCSGHGHCR-GGFCQCDSGWYGVDCSIPSVMS 313 (683)
Q Consensus 266 G~~G~~C~~~~~~~C~~~C~~~G~C~-~g~C~C~~G~~G~~C~~~~~~~ 313 (683)
++.|..|+.. ..+|.++|+|. ..+|.|++||+|..|+...|..
T Consensus 360 n~~g~~CD~~-----t~~C~ngg~C~~~~~C~C~~G~~G~~Ce~c~C~~ 403 (426)
T 3zyj_B 360 SIGTNVCDNE-----LLHCQNGGTCHNNVRCLCPAAYTGILCEKLRCEE 403 (426)
T ss_dssp -------------------------------------------------
T ss_pred CCCcCccccC-----cccCCCCCCcCCCCCCcCCCCCcCCCCcCCCCCC
Confidence 4567888753 25899999997 3499999999999999877764
No 47
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*
Probab=97.35 E-value=7.3e-05 Score=76.44 Aligned_cols=55 Identities=33% Similarity=0.759 Sum_probs=42.7
Q ss_pred ccccccccccCCCCCCCCCccccCCC--------CcCC-----CCCCCceecCCeeecCCCc------ccCCCCC
Q 005688 253 KVQFKEECDCKYDGLLGQFCEVPVSS--------TCVN-----QCSGHGHCRGGFCQCDSGW------YGVDCSI 308 (683)
Q Consensus 253 g~c~~g~C~C~~~G~~G~~C~~~~~~--------~C~~-----~C~~~G~C~~g~C~C~~G~------~G~~C~~ 308 (683)
|.+..|.|.|. +||+|..|+..... .|.. .|+++|+|+-|+|.|..+| +|..|+.
T Consensus 202 G~~~CG~C~C~-~g~~G~~CeC~~~~~~~~~~~~~C~~~~~~~~CSgrG~C~CG~C~C~~~~~~~~~~~G~~~~~ 275 (280)
T 2p26_A 202 GFLECGICRCD-TGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCGQCLCHTSDVPGKLIYGQYCEH 275 (280)
T ss_dssp EEEETTEEEEC-TTEESTTSCEECTTSCHHHHHHTTCSSTTSCGGGGSEEEETTEEEECCCSSTTCEEESTTSCE
T ss_pred CeECCCceeCC-CCCcCCcceecCCccccccccccCCCCCCCCccCCCceEeCCeeECcCCCCCCeeEeeEeccc
Confidence 33357899998 99999999865322 5752 5999999999999998886 6666653
No 48
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=97.34 E-value=9.3e-05 Score=78.88 Aligned_cols=28 Identities=25% Similarity=0.611 Sum_probs=20.5
Q ss_pred CCCCCCEEe---C-CCCceeeCCCCcCCCCCc
Q 005688 126 DCSGQGVCN---H-ELGQCRCFHGFRGKGCSE 153 (683)
Q Consensus 126 ~C~~~G~C~---~-~~G~C~C~~G~~G~~Ce~ 153 (683)
.|++||.+. . ..+.|.|.+||+|.+|+.
T Consensus 256 ~Cngh~s~c~~~~~~~~~C~C~~nt~G~~Ce~ 287 (375)
T 4aqt_A 256 KCNGHASECVKNEFDKLMCNCKHNTYGVDCEK 287 (375)
T ss_dssp CCTTSCSCEEECTTSCEEECCCTTEESTTSCE
T ss_pred cCCCCCcccCCCCCCCeeeeCcCCCcCCCccc
Confidence 478887532 1 223789999999999986
No 49
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=97.30 E-value=0.00014 Score=68.98 Aligned_cols=37 Identities=30% Similarity=0.766 Sum_probs=33.1
Q ss_pred cccCCCCCCCCCCCCEEeCCCCceeeCCCCcCCCCCcc
Q 005688 117 MIGGKSCKSDCSGQGVCNHELGQCRCFHGFRGKGCSER 154 (683)
Q Consensus 117 ~~~~~~C~~~C~~~G~C~~~~G~C~C~~G~~G~~Ce~~ 154 (683)
.|....|+..|+|+|.|+. .++|.|++||+|..|+..
T Consensus 145 ~C~~~~C~~~C~ngG~Cv~-P~~C~C~~Gw~G~~C~~~ 181 (188)
T 2ygo_A 145 TCQQAECPGGCRNGGFCNE-RRICECPDGFHGPHCEGT 181 (188)
T ss_dssp EECCCCCTTCCCTTCEECT-TSCEECCTTCBTTTTCBC
T ss_pred cccCCccCCCCCCCCEeCC-CCcccCcCCCCCCCCcCC
Confidence 4566789999999999996 899999999999999974
No 50
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=97.27 E-value=4.6e-05 Score=73.84 Aligned_cols=66 Identities=26% Similarity=0.648 Sum_probs=23.0
Q ss_pred CCCCCCCccccCCcccccccccccccccccCCCCCCCCCccccCCCCcCC---CCCCCceec----CCeeecCCCcc---
Q 005688 233 TTNGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLLGQFCEVPVSSTCVN---QCSGHGHCR----GGFCQCDSGWY--- 302 (683)
Q Consensus 233 ~~~C~~~G~C~~~~~~~~~~g~c~~g~C~C~~~G~~G~~C~~~~~~~C~~---~C~~~G~C~----~g~C~C~~G~~--- 302 (683)
.++|.++|.|..... .+.|.|+ +||+|..|+..+...|.. .|.+ +|+ ...|.|.+||+
T Consensus 47 ~~pC~ngg~C~n~~g---------~y~C~C~-~Gf~G~~Ce~~i~deC~~~~~~C~~--~C~n~~gsy~C~C~~Gy~l~~ 114 (195)
T 1nfu_B 47 TSPCQNQGKCKDGLG---------EYTCTCL-EGFEGKNCELFTRKLCSLDNGDCDQ--FCHEEQNSVVCSCARGYTLAD 114 (195)
T ss_dssp --------------------------------------------CCGGGTGGGGCSS--EEEEETTEEEEECCTTEEECT
T ss_pred CCCCCCCCEeECCCC---------CeeEeCC-CCceeccccccccccccCCCCCCCC--EeECCCCCeEEECCCCceeCC
Confidence 567888889965432 5799999 999999998743245753 4665 896 24899999999
Q ss_pred -cCCCCCCc
Q 005688 303 -GVDCSIPS 310 (683)
Q Consensus 303 -G~~C~~~~ 310 (683)
|..|+...
T Consensus 115 dG~~C~~~~ 123 (195)
T 1nfu_B 115 NGKACIPTG 123 (195)
T ss_dssp TSSCEEESS
T ss_pred CCCccccCC
Confidence 99997643
No 51
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=97.25 E-value=0.00019 Score=59.40 Aligned_cols=63 Identities=27% Similarity=0.708 Sum_probs=45.6
Q ss_pred CCC--CCCCCCCCEEeCCCC--ceeeCCCCc--CCCCCccccCCCCCCCCCCCCCCCcccccCC-CcccCCCc--eEeeC
Q 005688 121 KSC--KSDCSGQGVCNHELG--QCRCFHGFR--GKGCSERIHFQCNFPKTPELPYGRWVVSICP-THCDTTRA--MCFCG 191 (683)
Q Consensus 121 ~~C--~~~C~~~G~C~~~~G--~C~C~~G~~--G~~Ce~~~~~~C~~~~~~~~~~g~~~~~~C~-~~C~~~~g--~C~C~ 191 (683)
++| +++|.+ |+|....| +|.|++||+ |..|+. .++|..+ ..|. +.|....| .|.|+
T Consensus 6 deC~~~~~C~~-g~C~n~~g~y~C~C~~Gy~~~g~~C~d--ideC~~~------------~~C~~~~C~n~~g~y~C~C~ 70 (82)
T 1emn_A 6 DECKEPDVCKH-GQCINTDGSYRCECPFGYILAGNECVD--TDECSVG------------NPCGNGTCKNVIGGFECTCE 70 (82)
T ss_dssp CSSSSTTSCSS-SEECCCSSCCCEECCTTEEEETTEEEE--CCGGGTC------------CTTSSSCEEECSSSEEECCS
T ss_pred ccCCCCCCcCC-CEEEecCCCEEEECCCCeECCCCccCC--cccccCC------------CCCCCCEeECCCCCEEeECC
Confidence 677 367874 99987666 899999997 999964 5678631 1343 56665544 89999
Q ss_pred CCcccCC
Q 005688 192 EGTKYPN 198 (683)
Q Consensus 192 ~G~~G~~ 198 (683)
+||+|..
T Consensus 71 ~G~~g~~ 77 (82)
T 1emn_A 71 EGFEPGP 77 (82)
T ss_dssp SSSCCCS
T ss_pred CCeEeCC
Confidence 9998743
No 52
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=97.24 E-value=8.5e-05 Score=68.38 Aligned_cols=67 Identities=22% Similarity=0.491 Sum_probs=47.7
Q ss_pred CCCCCCCccccCCcccccccccccccccccCCCCCCCCCccccCCCCcC-CCCCCCc---eec-----CCeeecCCCcc-
Q 005688 233 TTNGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLLGQFCEVPVSSTCV-NQCSGHG---HCR-----GGFCQCDSGWY- 302 (683)
Q Consensus 233 ~~~C~~~G~C~~~~~~~~~~g~c~~g~C~C~~~G~~G~~C~~~~~~~C~-~~C~~~G---~C~-----~g~C~C~~G~~- 302 (683)
.++|.++|.|..... .++|.|+ +||+|..|+..+. .|. ..|.+++ +|+ ...|.|.+||+
T Consensus 52 ~~pC~n~g~C~~~~g---------~y~C~C~-~G~~G~~C~~~~~-~c~~c~~~~~~C~~~C~~~~g~~y~C~C~~Gy~l 120 (142)
T 2c4f_L 52 SSPCQNGGSCKDQLQ---------SYICFCL-PAFEGRNCETHKD-DQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSL 120 (142)
T ss_dssp GCCCCTTCEEEEETT---------EEEEECC-TTEESTTSCEEGG-GCCSTTTGGGGCSSEEECCTTSCCEEECCTTEEE
T ss_pred CCCcCCCCEEeCCCC---------CEEeeCC-CCccCCccccCcc-ccccccCCCCCccCEeECCCCCCEEEECCCCceE
Confidence 567888899965422 5699999 9999999986321 221 2344555 886 23899999999
Q ss_pred ---cCCCCCCc
Q 005688 303 ---GVDCSIPS 310 (683)
Q Consensus 303 ---G~~C~~~~ 310 (683)
|..|+...
T Consensus 121 ~~dG~~C~~~~ 131 (142)
T 2c4f_L 121 LADGVSCTPTV 131 (142)
T ss_dssp CTTSSCEEESS
T ss_pred CCCCCCCCCCC
Confidence 88887543
No 53
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=97.23 E-value=0.00013 Score=69.07 Aligned_cols=33 Identities=27% Similarity=0.805 Sum_probs=29.2
Q ss_pred CcCCCCCCCceec-CCeeecCCCcccCCCCCCcc
Q 005688 279 TCVNQCSGHGHCR-GGFCQCDSGWYGVDCSIPSV 311 (683)
Q Consensus 279 ~C~~~C~~~G~C~-~g~C~C~~G~~G~~C~~~~~ 311 (683)
.|.+.|+|+|.|+ .++|.|++||+|..|++...
T Consensus 150 ~C~~~C~ngG~Cv~P~~C~C~~Gw~G~~C~~~~~ 183 (188)
T 2ygo_A 150 ECPGGCRNGGFCNERRICECPDGFHGPHCEGTKH 183 (188)
T ss_dssp CCTTCCCTTCEECTTSCEECCTTCBTTTTCBC--
T ss_pred ccCCCCCCCCEeCCCCcccCcCCCCCCCCcCCcc
Confidence 7889999999998 78999999999999998653
No 54
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=97.21 E-value=0.00035 Score=52.69 Aligned_cols=34 Identities=38% Similarity=0.967 Sum_probs=28.0
Q ss_pred CCC-CC---CCCCCCEEe--CCCC--ceeeCCCCcCCCCCcc
Q 005688 121 KSC-KS---DCSGQGVCN--HELG--QCRCFHGFRGKGCSER 154 (683)
Q Consensus 121 ~~C-~~---~C~~~G~C~--~~~G--~C~C~~G~~G~~Ce~~ 154 (683)
++| ++ +|.++|+|. ...+ .|.|++||+|..|+..
T Consensus 4 ~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~ 45 (53)
T 1egf_A 4 PGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQTR 45 (53)
T ss_dssp CCCCTTSSCSSCSSCEEEEESSSSCEEEECCTTCCSSSSCCC
T ss_pred ccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCCcCCcCCcc
Confidence 567 33 899999998 4444 7999999999999975
No 55
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=97.20 E-value=0.00015 Score=67.03 Aligned_cols=63 Identities=29% Similarity=0.684 Sum_probs=48.1
Q ss_pred CCCCCCCccccCCcccccccccccccccccCCCCCCCCCccccCCCCcCC---CCCCCcee-c----CCeeecCCCcc--
Q 005688 233 TTNGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLLGQFCEVPVSSTCVN---QCSGHGHC-R----GGFCQCDSGWY-- 302 (683)
Q Consensus 233 ~~~C~~~G~C~~~~~~~~~~g~c~~g~C~C~~~G~~G~~C~~~~~~~C~~---~C~~~G~C-~----~g~C~C~~G~~-- 302 (683)
+++|.++|.|..... .+.|.|+ +||+|..|+.. +.|.. .|.+ +| + ...|.|.+||+
T Consensus 53 ~~pC~n~g~C~~~~~---------~y~C~C~-~G~~G~~C~~~--deC~~~~~~C~~--~C~~n~~g~y~C~C~~Gy~l~ 118 (146)
T 1x7a_L 53 PNPCLNGGLCKDDIN---------SYECWCQ-VGFEGKNCELD--ATCNIKNGRCKQ--FCKTGADSKVLCSCTTGYRLA 118 (146)
T ss_dssp SCSSCTTCEEEECSS---------CEEEECC-SSEESTTTCEE--CCTTSGGGSCSS--BCCCCSSSCCCCBCCTTEEEC
T ss_pred CCCCCCCCEeECCCC---------CEEEecC-CCCcCCcCCCC--ccccCCCCCCcC--CCCCCCCCCEEeEcCCCcEeC
Confidence 567888899965432 5799999 99999999874 45652 4554 78 5 34899999999
Q ss_pred --cCCCCCC
Q 005688 303 --GVDCSIP 309 (683)
Q Consensus 303 --G~~C~~~ 309 (683)
|..|+..
T Consensus 119 ~dG~~C~~~ 127 (146)
T 1x7a_L 119 PDQKSCKPA 127 (146)
T ss_dssp TTSSSEEEC
T ss_pred CCCCcCCCC
Confidence 8888754
No 56
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=97.18 E-value=0.00024 Score=51.61 Aligned_cols=29 Identities=34% Similarity=0.843 Sum_probs=24.5
Q ss_pred CCCCCCEEe--CCCC--ceeeCCCCcCCCCCcc
Q 005688 126 DCSGQGVCN--HELG--QCRCFHGFRGKGCSER 154 (683)
Q Consensus 126 ~C~~~G~C~--~~~G--~C~C~~G~~G~~Ce~~ 154 (683)
+|.++|+|. ...+ .|.|++||+|..|+..
T Consensus 10 pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~ 42 (45)
T 1a3p_A 10 YCLNGGVXMHIESLDSYTCNCVIGYSGDRCQTR 42 (45)
T ss_dssp CCSSSCEEEECTTTSSEEEECCTTEETTTTCEE
T ss_pred CCCCCCEEEeecCCCCEEEEcCCCCcCCcCCcc
Confidence 799999997 3333 8999999999999964
No 57
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=97.06 E-value=0.00039 Score=61.35 Aligned_cols=59 Identities=31% Similarity=0.591 Sum_probs=41.6
Q ss_pred CCCCCccccCCcccccccccccccccccCCCCCCCCCccccCC-CCcCC---CCCCCceec----CCeeecCCCcccCC
Q 005688 235 NGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLLGQFCEVPVS-STCVN---QCSGHGHCR----GGFCQCDSGWYGVD 305 (683)
Q Consensus 235 ~C~~~G~C~~~~~~~~~~g~c~~g~C~C~~~G~~G~~C~~~~~-~~C~~---~C~~~G~C~----~g~C~C~~G~~G~~ 305 (683)
.|.++|.|..... .++|.|+ +||+|..|+..++ ..|.. .|.. +|+ ..+|.|.+||+|..
T Consensus 21 ~C~~~g~C~~~~~---------~y~C~C~-~G~~G~~C~~~~~~~~C~~~~~~C~~--~C~n~~g~y~C~C~~G~~~~~ 87 (114)
T 1aut_L 21 LCCGHGTCIDGIG---------SFSCDCR-SGWEGRFCQREVSFLNCSLDNGGCTH--YCLEEVGWRRCSCAPGYKLGD 87 (114)
T ss_dssp TTTTSEEECCCSS---------CCCEEEC-TTEESTTSCEECCSSSSSSGGGGCSS--EEEECSSSEEEECCTTEEECT
T ss_pred cCCCcCCCCCCCC---------CcEeeCC-CCCcCCCcCcCCcCCcCcCCCCCCCC--EeECCCCCEEeECCCCeeECC
Confidence 4788899966533 5799999 9999999987532 23431 2332 786 34899999999543
No 58
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=97.06 E-value=0.00015 Score=64.51 Aligned_cols=43 Identities=26% Similarity=0.683 Sum_probs=34.0
Q ss_pred ccccccCCCCCC---CCCccccCCCCcC--CCCCCCceec----CCeeecCCCcccC
Q 005688 257 KEECDCKYDGLL---GQFCEVPVSSTCV--NQCSGHGHCR----GGFCQCDSGWYGV 304 (683)
Q Consensus 257 ~g~C~C~~~G~~---G~~C~~~~~~~C~--~~C~~~G~C~----~g~C~C~~G~~G~ 304 (683)
.++|.|+ +||+ |..|+. .+.|. ++| +++|+ ..+|.|++||+|.
T Consensus 60 ~y~C~C~-~Gy~~~~g~~C~d--ideC~~~~~C--~~~C~n~~g~y~C~C~~G~~g~ 111 (118)
T 1dx5_I 60 QASCECP-EGYILDDGFICTD--IDECENGGFC--SGVCHNLPGTFECICGPDSALA 111 (118)
T ss_dssp TTCEECC-TTEEEETTTEEEE--CCHHHHCSSC--SSEEEECSSSEEEEECSSSSCE
T ss_pred CeEeECC-CCccCCCCCcccc--ccccCCCCCC--cCeEEeCCCCEEEECCCCCccC
Confidence 5799999 9999 889953 34564 678 78997 3489999999875
No 59
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=97.06 E-value=0.0001 Score=67.08 Aligned_cols=65 Identities=26% Similarity=0.656 Sum_probs=21.7
Q ss_pred CCCCCCCccccCCcccccccccccccccccCCCCCCCCCccccCCCCcCC---CCCCCceec----CCeeecCCCcc---
Q 005688 233 TTNGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLLGQFCEVPVSSTCVN---QCSGHGHCR----GGFCQCDSGWY--- 302 (683)
Q Consensus 233 ~~~C~~~G~C~~~~~~~~~~g~c~~g~C~C~~~G~~G~~C~~~~~~~C~~---~C~~~G~C~----~g~C~C~~G~~--- 302 (683)
.++|.++|.|..... .+.|.|+ +||+|..|+..+.+.|.. .|.+ +|+ ...|.|.+||+
T Consensus 47 ~~pC~n~g~C~~~~~---------~y~C~C~-~G~~G~~C~~~i~d~C~~~~~~C~~--~C~~~~g~y~C~C~~Gy~l~~ 114 (134)
T 2vh0_B 47 TSPCQNQGKCKDGLG---------EYTCTCL-EGFEGKNCELFTRKLCSLDNGDCDQ--FCHEEQNSVVCSCARGYTLAD 114 (134)
T ss_dssp --------------------------------------------CCGGGTGGGGCSS--EEEEETTEEEEECCTTEEECT
T ss_pred CCCCCCcCCcccCCC---------CEEeeCC-CCccCCccccCCCCccccCCCCCCC--EeECCCCCEEEECCCCcEECC
Confidence 567888888865432 5799999 999999998743245652 4654 886 23899999999
Q ss_pred -cCCCCCC
Q 005688 303 -GVDCSIP 309 (683)
Q Consensus 303 -G~~C~~~ 309 (683)
|..|+..
T Consensus 115 ~g~~C~~~ 122 (134)
T 2vh0_B 115 NGKACIPT 122 (134)
T ss_dssp TSSCEEES
T ss_pred CCCccCcC
Confidence 8888653
No 60
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*
Probab=97.05 E-value=0.00029 Score=71.95 Aligned_cols=59 Identities=29% Similarity=0.633 Sum_probs=44.7
Q ss_pred CCCCCEEeCCCCceeeCCCCcCCCCCccccC--------CCCCCCCCCCCCCCcccccCCCcccCCCceEeeCCCccc
Q 005688 127 CSGQGVCNHELGQCRCFHGFRGKGCSERIHF--------QCNFPKTPELPYGRWVVSICPTHCDTTRAMCFCGEGTKY 196 (683)
Q Consensus 127 C~~~G~C~~~~G~C~C~~G~~G~~Ce~~~~~--------~C~~~~~~~~~~g~~~~~~C~~~C~~~~g~C~C~~G~~G 196 (683)
|+++|+|. .|.|.|.+||+|+.|+-.... .|..+. .+..|+|.+++.-|+|.|..++.+
T Consensus 198 C~g~G~~~--CG~C~C~~g~~G~~CeC~~~~~~~~~~~~~C~~~~---------~~~~CSgrG~C~CG~C~C~~~~~~ 264 (280)
T 2p26_A 198 CHGKGFLE--CGICRCDTGYIGKNCECQTQGRSSQELEGSCRKDN---------NSIICSGLGDCVCGQCLCHTSDVP 264 (280)
T ss_dssp GGGSEEEE--TTEEEECTTEESTTSCEECTTSCHHHHHHTTCSST---------TSCGGGGSEEEETTEEEECCCSST
T ss_pred cCCCCeEC--CCceeCCCCCcCCcceecCCccccccccccCCCCC---------CCCccCCCceEeCCeeECcCCCCC
Confidence 88999999 899999999999999843111 464321 124699888888899999887643
No 61
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=97.00 E-value=0.00078 Score=70.34 Aligned_cols=60 Identities=23% Similarity=0.545 Sum_probs=46.8
Q ss_pred CCCCCCCccccCCcccccccccccccccccCCCCCCCCCccccCCCCcC----CCCCCCceec----CCeeecCCCcccC
Q 005688 233 TTNGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLLGQFCEVPVSSTCV----NQCSGHGHCR----GGFCQCDSGWYGV 304 (683)
Q Consensus 233 ~~~C~~~G~C~~~~~~~~~~g~c~~g~C~C~~~G~~G~~C~~~~~~~C~----~~C~~~G~C~----~g~C~C~~G~~G~ 304 (683)
.++|.++|.|..... .+.|.|+ +||+|..|+.. .+.|. ++|.+ +|. ...|.|.+||.|.
T Consensus 10 ~~pC~~~g~C~~~~~---------~~~C~C~-~g~~g~~C~~~-~~eC~~~~~~~C~~--~C~~~~g~~~C~C~~g~~~~ 76 (317)
T 3h5c_B 10 SQPCLHNGSCQDSIW---------GYTCTCS-PGYEGSNCELA-KNECHPERTDGCQH--FCLPGQESYTCSCAQGYRLG 76 (317)
T ss_dssp SCCCTTTCCCCCCSS---------SCCCCCS-SSCCSSSSCCC-SSSCCTTCTTSCSS--EEECCSSSCEEECCTTEECC
T ss_pred CCCCCCCCEeECCCC---------CeEEECC-CCCcCCccccC-cccCCCCCCCCCcC--ccccCCCeeEEecccccccc
Confidence 567889999976432 5799999 99999999855 34664 46876 896 3489999999985
Q ss_pred C
Q 005688 305 D 305 (683)
Q Consensus 305 ~ 305 (683)
.
T Consensus 77 ~ 77 (317)
T 3h5c_B 77 E 77 (317)
T ss_dssp T
T ss_pred c
Confidence 3
No 62
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=96.99 E-value=0.00021 Score=55.93 Aligned_cols=39 Identities=28% Similarity=0.531 Sum_probs=30.3
Q ss_pred CCC-CCCCCCCCEEeC-----CCC--ceeeCCCCcCCCCCccccCCCC
Q 005688 121 KSC-KSDCSGQGVCNH-----ELG--QCRCFHGFRGKGCSERIHFQCN 160 (683)
Q Consensus 121 ~~C-~~~C~~~G~C~~-----~~G--~C~C~~G~~G~~Ce~~~~~~C~ 160 (683)
++| +++|.|+|+|.. ..+ .|.|++||+|..|+.. .++|.
T Consensus 7 ~~C~~~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~~Ce~~-i~~~~ 53 (63)
T 1hae_A 7 AEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTEN-VPMKV 53 (63)
T ss_dssp CHHHHTTSCTTCEEEEEESSSSSCCEEEECCTTEESTTSCEE-CCSSC
T ss_pred CCCCCCcCCCCcEEecCCccCCCCCEEEECCCCCcCCccCcC-cCccc
Confidence 567 678999999974 222 7999999999999975 34444
No 63
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=96.99 E-value=0.00044 Score=63.49 Aligned_cols=61 Identities=20% Similarity=0.517 Sum_probs=47.7
Q ss_pred CCCCCCCccccCCcccccccccccccccccCCCCCCC---------CCccccCCCCcCC----CCCCCceec----CCee
Q 005688 233 TTNGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLLG---------QFCEVPVSSTCVN----QCSGHGHCR----GGFC 295 (683)
Q Consensus 233 ~~~C~~~G~C~~~~~~~~~~g~c~~g~C~C~~~G~~G---------~~C~~~~~~~C~~----~C~~~G~C~----~g~C 295 (683)
...|.++|.|.. .++|.|+ +||+| ..|+. .+.|.. +|.++++|+ ...|
T Consensus 6 ~~~C~~~~~C~~------------~~~C~C~-~G~~g~~~~~~~~~~~C~d--ideC~~~~~~~C~~~~~C~n~~g~y~C 70 (143)
T 2bou_A 6 ARWCPQDSSCVN------------ATACRCN-PGFSSFSEIITTPMETCDD--INECATLSKVSCGKFSDCWNTEGSYDC 70 (143)
T ss_dssp CTTCCTTEEESS------------SSCEEEC-TTEECSSSSBCSTTCCCEE--CCGGGC----CCCTTEEEEECSSCEEE
T ss_pred cCcCCCCCEEcC------------CCEEeCC-CCCcCccccccCCCCcCCc--cccccCCCCCCCCCCCEEEcCCCCeEe
Confidence 456788888854 4789999 99998 57853 356763 699999997 3489
Q ss_pred ecCCCcccCCCCC
Q 005688 296 QCDSGWYGVDCSI 308 (683)
Q Consensus 296 ~C~~G~~G~~C~~ 308 (683)
.|.+||+|..|+.
T Consensus 71 ~C~~Gy~g~~~~~ 83 (143)
T 2bou_A 71 VCSPGYEPVSGAK 83 (143)
T ss_dssp EECTTEEETTCCS
T ss_pred ECCCCcccCcCcc
Confidence 9999999997764
No 64
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=96.95 E-value=0.0002 Score=60.02 Aligned_cols=62 Identities=31% Similarity=0.823 Sum_probs=44.7
Q ss_pred CCC-CCC--CCCCCEEeCCCC--ceeeCCCCc----CCCCCccccCCCCCCCCCCCCCCCcccccCCCcccCCCc--eEe
Q 005688 121 KSC-KSD--CSGQGVCNHELG--QCRCFHGFR----GKGCSERIHFQCNFPKTPELPYGRWVVSICPTHCDTTRA--MCF 189 (683)
Q Consensus 121 ~~C-~~~--C~~~G~C~~~~G--~C~C~~G~~----G~~Ce~~~~~~C~~~~~~~~~~g~~~~~~C~~~C~~~~g--~C~ 189 (683)
++| .++ | ++|+|....| +|.|++||+ |..|+. .++|..+ .|.+.|....| .|.
T Consensus 4 deC~~~~~~C-~~~~C~n~~g~y~C~C~~G~~~~~~g~~C~d--ideC~~~-------------~C~~~C~n~~g~y~C~ 67 (87)
T 1z6c_A 4 DECSLKPSIC-GTAVCKNIPGDFECECPEGYRYNLKSKSCED--IDECSEN-------------MCAQLCVNYPGGYTCY 67 (87)
T ss_dssp CSSSSSSSSB-TTSSCCCBTTBCCCSSSTTCEEETTTTEEEC--CCHHHHS-------------CCSSEECCCSSSCCEE
T ss_pred ccccCCCCCC-CCCEeECCCCCEEEECCCCceECCCCCcCCC--cCeeCCC-------------CCCCEEEccCCCEEEE
Confidence 677 334 8 7899987666 899999999 888963 5677542 46667766654 899
Q ss_pred eCCCcccCCC
Q 005688 190 CGEGTKYPNR 199 (683)
Q Consensus 190 C~~G~~G~~C 199 (683)
|+ |+.|..+
T Consensus 68 C~-g~~G~~~ 76 (87)
T 1z6c_A 68 CD-GKKGFKL 76 (87)
T ss_dssp CC-SSSCCBC
T ss_pred CC-CCcCCcc
Confidence 97 6666555
No 65
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=96.90 E-value=0.00068 Score=56.00 Aligned_cols=58 Identities=28% Similarity=0.675 Sum_probs=43.3
Q ss_pred CCCCCCccccCCcccccccccccccccccCCCCCC--CCCccccCCCCcC--CCCCCCceec----CCeeecCCCcccCC
Q 005688 234 TNGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLL--GQFCEVPVSSTCV--NQCSGHGHCR----GGFCQCDSGWYGVD 305 (683)
Q Consensus 234 ~~C~~~G~C~~~~~~~~~~g~c~~g~C~C~~~G~~--G~~C~~~~~~~C~--~~C~~~G~C~----~g~C~C~~G~~G~~ 305 (683)
.+|.+ |.|.+... .++|.|+ +||+ |..|+. .+.|. ++|.+ |+|+ ..+|.|++||+|..
T Consensus 12 ~~C~~-g~C~n~~g---------~y~C~C~-~Gy~~~g~~C~d--ideC~~~~~C~~-~~C~n~~g~y~C~C~~G~~g~~ 77 (82)
T 1emn_A 12 DVCKH-GQCINTDG---------SYRCECP-FGYILAGNECVD--TDECSVGNPCGN-GTCKNVIGGFECTCEEGFEPGP 77 (82)
T ss_dssp TSCSS-SEECCCSS---------CCCEECC-TTEEEETTEEEE--CCGGGTCCTTSS-SCEEECSSSEEECCSSSSCCCS
T ss_pred CCcCC-CEEEecCC---------CEEEECC-CCeECCCCccCC--cccccCCCCCCC-CEeECCCCCEEeECCCCeEeCC
Confidence 45654 78866543 5799999 9997 999964 35664 67875 6997 34899999999864
No 66
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=96.88 E-value=0.00043 Score=50.52 Aligned_cols=33 Identities=30% Similarity=0.735 Sum_probs=26.4
Q ss_pred CCC-C---CCCCCCCEEeCCC--C--ceeeCCCCcCCCCCcc
Q 005688 121 KSC-K---SDCSGQGVCNHEL--G--QCRCFHGFRGKGCSER 154 (683)
Q Consensus 121 ~~C-~---~~C~~~G~C~~~~--G--~C~C~~G~~G~~Ce~~ 154 (683)
++| + ++|.| |+|.... + .|.|++||+|.+||..
T Consensus 4 ~~C~~~~~~pC~n-G~C~~~~~~~~~~C~C~~GytG~~Ce~~ 44 (46)
T 1k36_A 4 TKCSSDMNGYCLH-GQCIYLVDMSQNYCRCEVGYTGVRCEHF 44 (46)
T ss_dssp ECCCTTCCSSCSS-EEEEEETTTTEEEEEECTTCSSTTSCCC
T ss_pred ccCCCCCCCCCCC-CEeeccCCCCCEEEECCCCCccCCCCcc
Confidence 567 3 68998 9997432 2 7999999999999974
No 67
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=96.87 E-value=0.00022 Score=59.49 Aligned_cols=63 Identities=27% Similarity=0.736 Sum_probs=44.6
Q ss_pred CCC-C--CCCCCCCEEeCCCC--ceeeCCCCc-----CCCCCccccCCCCCCCCCCCCCCCcccccCC-CcccCCCc--e
Q 005688 121 KSC-K--SDCSGQGVCNHELG--QCRCFHGFR-----GKGCSERIHFQCNFPKTPELPYGRWVVSICP-THCDTTRA--M 187 (683)
Q Consensus 121 ~~C-~--~~C~~~G~C~~~~G--~C~C~~G~~-----G~~Ce~~~~~~C~~~~~~~~~~g~~~~~~C~-~~C~~~~g--~ 187 (683)
++| . ..|. +|+|....| +|.|++||+ |..|+. .++|..... .|. +.|....| .
T Consensus 4 deC~~~~~~C~-~g~C~n~~g~y~C~C~~Gy~~~~~~g~~C~d--ideC~~~~~-----------~C~~~~C~n~~g~y~ 69 (86)
T 1lmj_A 4 DECRISPDLCG-RGQCVNTPGDFECKCDEGYESGFMMMKNCMD--IDECQRDPL-----------LCRGGVCHNTEGSYR 69 (86)
T ss_dssp CTTTTCSSTTT-TSCEEEETTEEEECCCSSEEECTTTSSSEEE--CCHHHHCSS-----------TTTTSEEEEETTEEE
T ss_pred ccccCCCCCCC-CCEEECCCCCEEeeCCCCcCccCCCCCccCC--cccccCCCC-----------cCCCCEeEcCCCCEE
Confidence 677 3 3485 569987666 899999998 788973 567764321 243 45666554 8
Q ss_pred EeeCCCcccC
Q 005688 188 CFCGEGTKYP 197 (683)
Q Consensus 188 C~C~~G~~G~ 197 (683)
|.|++||++.
T Consensus 70 C~C~~G~~~~ 79 (86)
T 1lmj_A 70 CECPPGHQLS 79 (86)
T ss_dssp EESCTTSCCC
T ss_pred EECcCCcccC
Confidence 9999999874
No 68
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=96.83 E-value=0.00011 Score=55.27 Aligned_cols=39 Identities=23% Similarity=0.644 Sum_probs=31.6
Q ss_pred cccccCCCCCCCCCccccCCCCcCCCCCCCceecC----C----eeecCCCcccCCCCCC
Q 005688 258 EECDCKYDGLLGQFCEVPVSSTCVNQCSGHGHCRG----G----FCQCDSGWYGVDCSIP 309 (683)
Q Consensus 258 g~C~C~~~G~~G~~C~~~~~~~C~~~C~~~G~C~~----g----~C~C~~G~~G~~C~~~ 309 (683)
..|.|+ +||+ .++|.|+|+|+. + .|.|.+||+|..|+..
T Consensus 3 ~~C~C~-~g~~------------~~pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G~~Ce~~ 49 (52)
T 3ca7_A 3 PTYKCP-ETFD------------AWYCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEYK 49 (52)
T ss_dssp CCBCCC-HHHH------------HHTSCTTCEEEEEEETTEEEEEEECCTTEESTTSCEE
T ss_pred eeeECC-CCCc------------CCcCCCCCEEecCccCCCCCEEEECCCCCcCCCCccc
Confidence 368888 8886 356889999972 2 8999999999999864
No 69
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=96.78 E-value=0.00019 Score=81.46 Aligned_cols=71 Identities=20% Similarity=0.427 Sum_probs=53.9
Q ss_pred CCCCCCccCCCC--CccCCCCCCCccccCCcccccccccccccccccCCCCCCCCCccccCCCCcCCCCCCCceecCCee
Q 005688 218 PKSTDWAKADLD--NIFTTNGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLLGQFCEVPVSSTCVNQCSGHGHCRGGFC 295 (683)
Q Consensus 218 ~C~~gw~g~~c~--~~~~~~C~~~G~C~~~~~~~~~~g~c~~g~C~C~~~G~~G~~C~~~~~~~C~~~C~~~G~C~~g~C 295 (683)
.|.++|.|.+|. ..++..|++||.| +.|+|.|. +||+|..|+.. ...|+..|+ ++...+.
T Consensus 521 ~C~~gw~g~dc~i~~~Cp~~C~ghG~C-------------~~G~C~Cd-~G~~G~~C~~~-~~~~~~~~~--~~Fet~~- 582 (725)
T 2e26_A 521 DKQQTWAIDNVYIGDGCLDMCSGHGRC-------------VQGSCVCD-EQWGGLYCDEP-ETSLPTQLK--DNFNRAP- 582 (725)
T ss_dssp CTTCCEEEEEEEEESCSSGGGGGSEEE-------------ETTEEEEC-TTEESTTSCEE-SSCCCSCEE--ECCSSCC-
T ss_pred ccCCCcccccccccCCCCcccCCCcEE-------------CCCCEeeC-CCccCCCcCcc-CCCCchhhh--ccccCCc-
Confidence 478899999987 2334566666666 68999999 99999999986 456777887 5556554
Q ss_pred ecCCCcccCCCC
Q 005688 296 QCDSGWYGVDCS 307 (683)
Q Consensus 296 ~C~~G~~G~~C~ 307 (683)
. .++|++.+|.
T Consensus 583 ~-~~~W~~v~gg 593 (725)
T 2e26_A 583 S-NQNWLTVSGG 593 (725)
T ss_dssp C-TTTEEEEESE
T ss_pred c-CCCceecCCc
Confidence 4 8889888887
No 70
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=96.68 E-value=0.00068 Score=51.06 Aligned_cols=31 Identities=35% Similarity=0.879 Sum_probs=26.0
Q ss_pred CCCCCCCCEEe--CCCC--ceeeCCCCcCCCCCcc
Q 005688 124 KSDCSGQGVCN--HELG--QCRCFHGFRGKGCSER 154 (683)
Q Consensus 124 ~~~C~~~G~C~--~~~G--~C~C~~G~~G~~Ce~~ 154 (683)
+++|.|+|+|. ...+ .|.|++||+|..||..
T Consensus 11 ~~pC~nGG~C~~~~~~~~~~C~C~~GytG~~Ce~~ 45 (53)
T 1nql_B 11 DGYCLHDGVCMYIEALDKYACNCVVGYIGERCQYR 45 (53)
T ss_dssp CCEECTTCEEEEETTTTEEEEEECTTEESTTSCEE
T ss_pred CCCCCCCeEEeeecCCCCEEEecCCCCcCCCCCcC
Confidence 56799999997 3333 8999999999999975
No 71
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=96.59 E-value=0.0012 Score=70.70 Aligned_cols=70 Identities=24% Similarity=0.477 Sum_probs=46.9
Q ss_pred CCCCCCE-EeCC------CCceeeCCCCcCCCCCccccCCCCCCCCCC-------CCCCCcccccCCCc---cc------
Q 005688 126 DCSGQGV-CNHE------LGQCRCFHGFRGKGCSERIHFQCNFPKTPE-------LPYGRWVVSICPTH---CD------ 182 (683)
Q Consensus 126 ~C~~~G~-C~~~------~G~C~C~~G~~G~~Ce~~~~~~C~~~~~~~-------~~~g~~~~~~C~~~---C~------ 182 (683)
.|++|+. |+.. .|+|.|.++++|.+||. |..+.... ...+.|....|+++ |.
T Consensus 267 ~CnGHA~~C~~~~~~~~~~g~C~C~hnT~G~~CEr-----C~pGy~g~p~~~at~~~~~~C~pC~Cnghs~~C~~d~~~~ 341 (403)
T 2y38_A 267 VCHGHADVCDAKDPLDPFRLQCACQHNTCGGSCDR-----CCPGFNQQPWKPATTDSANECQSCNCHGHAYDCYYDPEVD 341 (403)
T ss_dssp CCTTBCSCEEESCTTSTTCEEECCCTTEESSSCCE-----ECTTCCSSCCCCCCSSCCCCCCCCCCTTSCSCEEECHHHH
T ss_pred ccCCCccccCCCCCCCccceEeECcCcCcCCCCCC-----CCccccCCcccccccCCCccccccccCCCCcccccCcccc
Confidence 5899986 9742 35799999999999996 66543321 01124555556543 41
Q ss_pred ------------CCCceEe-eCCCcccCCCC
Q 005688 183 ------------TTRAMCF-CGEGTKYPNRP 200 (683)
Q Consensus 183 ------------~~~g~C~-C~~G~~G~~C~ 200 (683)
...|.|. |..++.|.+|+
T Consensus 342 ~~~~s~~~~~~~~~~G~C~~C~~nt~G~~CE 372 (403)
T 2y38_A 342 RREASQNQDNVYQGGGVCLDCQHHTTGINCE 372 (403)
T ss_dssp HTTCCCCTTSCSCCCEEESSCCSSEESTTSC
T ss_pred cccccccccccCCCCCCCCCCcCcCcCCCCC
Confidence 2367896 99999988885
No 72
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=96.53 E-value=0.00049 Score=53.41 Aligned_cols=34 Identities=26% Similarity=0.773 Sum_probs=29.2
Q ss_pred CCC-CCCCCCC--CEEeCCCC--ceeeCCCCc-CCCCCcc
Q 005688 121 KSC-KSDCSGQ--GVCNHELG--QCRCFHGFR-GKGCSER 154 (683)
Q Consensus 121 ~~C-~~~C~~~--G~C~~~~G--~C~C~~G~~-G~~Ce~~ 154 (683)
++| +++|.++ |+|....| .|.|++||+ |.+|+..
T Consensus 12 d~C~snPC~nga~gtC~~~~g~y~C~C~~Gy~~G~~C~~~ 51 (61)
T 2k2s_B 12 AACSSNPCGPEAAGTCKETNSGYICRCNQGYRISLDGTGN 51 (61)
T ss_dssp CHHHHCSSCSSSCCEEEECSSEEEEECCTTEEEEECSSSC
T ss_pred CcCcCCCCcCCCccccccCCCceEeECCCCCccCCCCCCC
Confidence 678 7889998 99986655 899999999 9999864
No 73
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=96.44 E-value=0.0008 Score=58.64 Aligned_cols=53 Identities=30% Similarity=0.676 Sum_probs=18.6
Q ss_pred CEEeCCCC--ceeeCCCCcC---CCCCccccCCCCCCCCCCCCCCCcccccCCCcccCCCc--eEeeCCCcccC
Q 005688 131 GVCNHELG--QCRCFHGFRG---KGCSERIHFQCNFPKTPELPYGRWVVSICPTHCDTTRA--MCFCGEGTKYP 197 (683)
Q Consensus 131 G~C~~~~G--~C~C~~G~~G---~~Ce~~~~~~C~~~~~~~~~~g~~~~~~C~~~C~~~~g--~C~C~~G~~G~ 197 (683)
.+|....| .|.|++||+| ..|+. .++|..+ ..|.+.|....| .|.|++||.+.
T Consensus 41 ~~C~n~~g~y~C~C~~Gy~g~~g~~C~d--ideC~~~------------~~C~~~C~n~~gsy~C~C~~Gy~~~ 100 (107)
T 2w2n_E 41 YVCNDLKIGYECLCPDGFQLVAQRRCED--IDECQDP------------DTCSQLCVNLEGGYKCQCEEGFQLD 100 (107)
T ss_dssp SEEECCSBSCEEECCTTCEEETTTEEEC----------------------------------------------
T ss_pred CEeEeCCCCeEEECCCCccccCCCcccc--ccccCCC------------CCcCCeeecCCCCEEEECCCCceEC
Confidence 48986555 8999999998 78983 5788632 246677776654 89999999864
No 74
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=96.42 E-value=0.0017 Score=70.15 Aligned_cols=63 Identities=27% Similarity=0.668 Sum_probs=46.6
Q ss_pred CCC-CCCCCCCCEEeCCCC--ceeeCCCCc---CCCCCccccCCCCCCCCCCCCCCCcccccCCCcccCCCc--eEeeCC
Q 005688 121 KSC-KSDCSGQGVCNHELG--QCRCFHGFR---GKGCSERIHFQCNFPKTPELPYGRWVVSICPTHCDTTRA--MCFCGE 192 (683)
Q Consensus 121 ~~C-~~~C~~~G~C~~~~G--~C~C~~G~~---G~~Ce~~~~~~C~~~~~~~~~~g~~~~~~C~~~C~~~~g--~C~C~~ 192 (683)
++| .++|...++|....| .|.|++||. |..|+. .++|..+ ..|...|.+..| .|.|.+
T Consensus 1 ~eC~~~~~~c~~~C~~~~~~y~C~C~~G~~~~~~~~C~d--ideC~~~------------~~C~~~C~n~~g~~~C~C~~ 66 (400)
T 3p5b_L 1 NECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRRCED--IDECQDP------------DTCSQLCVNLEGGYKCQCEE 66 (400)
T ss_dssp CCTTTTGGGCSSEEEECSSSEEEECCTTEEECSSSCEEE--CCCCSTT------------SSCSSCCBCCSSSCBCCCCT
T ss_pred CcccCCCCCCCCEeECCCCCeEEECCCCCCcCCCCcccC--chhhhcc------------CCCCCccCCCccceeeeccc
Confidence 356 445555679986665 899999998 899974 6788742 257777877655 899999
Q ss_pred CcccC
Q 005688 193 GTKYP 197 (683)
Q Consensus 193 G~~G~ 197 (683)
||.+.
T Consensus 67 g~~~~ 71 (400)
T 3p5b_L 67 GFQLD 71 (400)
T ss_dssp TCCCC
T ss_pred ccccc
Confidence 99864
No 75
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=96.35 E-value=0.002 Score=44.96 Aligned_cols=30 Identities=33% Similarity=0.905 Sum_probs=24.7
Q ss_pred Cc-CCCCCCCceec----CCeeecCCCcccCCCCC
Q 005688 279 TC-VNQCSGHGHCR----GGFCQCDSGWYGVDCSI 308 (683)
Q Consensus 279 ~C-~~~C~~~G~C~----~g~C~C~~G~~G~~C~~ 308 (683)
.| .++|.++|+|+ ...|.|++||+|..|++
T Consensus 5 ~C~~~pC~ngg~C~~~~~~~~C~C~~G~~G~~Ce~ 39 (39)
T 1edm_B 5 QCESNPCLNGGSCKDDINSYECWCPFGFEGKNCEL 39 (39)
T ss_dssp TTTTCCCCTTCEEEEETTEEEEECCTTCCSTTSCC
T ss_pred cCCCCCCCCCCEeEcCCCceEeECCCCCcCCccCC
Confidence 44 36899999997 23899999999999974
No 76
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=96.31 E-value=0.00089 Score=58.36 Aligned_cols=44 Identities=36% Similarity=0.724 Sum_probs=14.5
Q ss_pred ccccccCCCCCCC---CCccccCCCCcC--CCCCCCceec----CCeeecCCCcccCC
Q 005688 257 KEECDCKYDGLLG---QFCEVPVSSTCV--NQCSGHGHCR----GGFCQCDSGWYGVD 305 (683)
Q Consensus 257 ~g~C~C~~~G~~G---~~C~~~~~~~C~--~~C~~~G~C~----~g~C~C~~G~~G~~ 305 (683)
.++|.|+ +||+| ..|+. .+.|. ++|. ++|+ ...|.|.+||.|..
T Consensus 49 ~y~C~C~-~Gy~g~~g~~C~d--ideC~~~~~C~--~~C~n~~gsy~C~C~~Gy~~~~ 101 (107)
T 2w2n_E 49 GYECLCP-DGFQLVAQRRCED--IDECQDPDTCS--QLCVNLEGGYKCQCEEGFQLDP 101 (107)
T ss_dssp SCEEECC-TTCEEETTTEEEC-------------------------------------
T ss_pred CeEEECC-CCccccCCCcccc--ccccCCCCCcC--CeeecCCCCEEEECCCCceECC
Confidence 5799999 99998 78973 45664 5675 6887 34899999998754
No 77
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=96.20 E-value=0.0034 Score=52.29 Aligned_cols=58 Identities=31% Similarity=0.658 Sum_probs=42.1
Q ss_pred CCCCccccCCcccccccccccccccccCCCCCC----CCCccccCCCCcC-CCCCCCceec----CCeeecCCCcccCCC
Q 005688 236 GSKPGWCNVDPEEAYALKVQFKEECDCKYDGLL----GQFCEVPVSSTCV-NQCSGHGHCR----GGFCQCDSGWYGVDC 306 (683)
Q Consensus 236 C~~~G~C~~~~~~~~~~g~c~~g~C~C~~~G~~----G~~C~~~~~~~C~-~~C~~~G~C~----~g~C~C~~G~~G~~C 306 (683)
| +++.|.+... .++|.|+ +||+ |..|+. .+.|. ++|. ++|+ ..+|.|+ |+.|..|
T Consensus 13 C-~~~~C~n~~g---------~y~C~C~-~G~~~~~~g~~C~d--ideC~~~~C~--~~C~n~~g~y~C~C~-g~~G~~~ 76 (87)
T 1z6c_A 13 C-GTAVCKNIPG---------DFECECP-EGYRYNLKSKSCED--IDECSENMCA--QLCVNYPGGYTCYCD-GKKGFKL 76 (87)
T ss_dssp B-TTSSCCCBTT---------BCCCSSS-TTCEEETTTTEEEC--CCHHHHSCCS--SEECCCSSSCCEECC-SSSCCBC
T ss_pred C-CCCEeECCCC---------CEEEECC-CCceECCCCCcCCC--cCeeCCCCCC--CEEEccCCCEEEECC-CCcCCcc
Confidence 6 6677865433 5799999 9999 888963 34564 5786 6897 3489998 7777777
Q ss_pred CCC
Q 005688 307 SIP 309 (683)
Q Consensus 307 ~~~ 309 (683)
+..
T Consensus 77 ~~~ 79 (87)
T 1z6c_A 77 AQD 79 (87)
T ss_dssp CTT
T ss_pred cCC
Confidence 653
No 78
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=96.06 E-value=0.0015 Score=48.94 Aligned_cols=30 Identities=30% Similarity=0.729 Sum_probs=25.0
Q ss_pred CCCCCCCEEeC----CCC--ceeeCCCCcCCCCCcc
Q 005688 125 SDCSGQGVCNH----ELG--QCRCFHGFRGKGCSER 154 (683)
Q Consensus 125 ~~C~~~G~C~~----~~G--~C~C~~G~~G~~Ce~~ 154 (683)
++|.|+|+|.. ..+ .|.|++||+|..||..
T Consensus 14 ~pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G~~Ce~~ 49 (52)
T 3ca7_A 14 WYCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEYK 49 (52)
T ss_dssp HTSCTTCEEEEEEETTEEEEEEECCTTEESTTSCEE
T ss_pred CcCCCCCEEecCccCCCCCEEEECCCCCcCCCCccc
Confidence 57999999984 223 8999999999999974
No 79
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.06 E-value=0.023 Score=65.84 Aligned_cols=43 Identities=37% Similarity=0.772 Sum_probs=32.3
Q ss_pred ccccccCCCCCC---CCCccccCCCCcC--CCCCCCceec----CCeeecCCCcccC
Q 005688 257 KEECDCKYDGLL---GQFCEVPVSSTCV--NQCSGHGHCR----GGFCQCDSGWYGV 304 (683)
Q Consensus 257 ~g~C~C~~~G~~---G~~C~~~~~~~C~--~~C~~~G~C~----~g~C~C~~G~~G~ 304 (683)
.++|.|+ +||. |..|+. ...|. ..|+ .+|+ ..+|.|.+||.+.
T Consensus 314 ~~~C~C~-~G~~~~~~~~C~d--ideC~~~~~C~--~~C~n~~g~y~C~C~~G~~~~ 365 (699)
T 1n7d_A 314 GYECLCP-DGFQLVAQRRCED--IDECQDPDTCS--QLCVNLEGGYKCQCEEGFQLD 365 (699)
T ss_dssp CCCCCCC-SSSCCCSSSCCCC--CCCCSSSSSCT--TTCCBCSSCBCCCCCSSCBCC
T ss_pred CcEEeCC-CCeEcCCCCcccC--ccccCCCCccc--cccccCCCCeeeeeecccccC
Confidence 4699999 9998 788974 35664 4565 3675 4589999999864
No 80
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=96.04 E-value=0.0023 Score=46.30 Aligned_cols=28 Identities=25% Similarity=0.542 Sum_probs=23.9
Q ss_pred CCCCCceec------CCeeecCCCcccCCCCCCc
Q 005688 283 QCSGHGHCR------GGFCQCDSGWYGVDCSIPS 310 (683)
Q Consensus 283 ~C~~~G~C~------~g~C~C~~G~~G~~C~~~~ 310 (683)
+|.++|+|. ...|.|.+||+|..|++.+
T Consensus 10 pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~~ 43 (45)
T 1a3p_A 10 YCLNGGVXMHIESLDSYTCNCVIGYSGDRCQTRD 43 (45)
T ss_dssp CCSSSCEEEECTTTSSEEEECCTTEETTTTCEEC
T ss_pred CCCCCCEEEeecCCCCEEEEcCCCCcCCcCCccc
Confidence 799999995 2389999999999998754
No 81
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=95.82 E-value=0.0077 Score=45.15 Aligned_cols=35 Identities=20% Similarity=0.361 Sum_probs=26.9
Q ss_pred CCCCCCcccc--CCcccccccccccccccccCCCCCCCCCccccCCC
Q 005688 234 TNGSKPGWCN--VDPEEAYALKVQFKEECDCKYDGLLGQFCEVPVSS 278 (683)
Q Consensus 234 ~~C~~~G~C~--~~~~~~~~~g~c~~g~C~C~~~G~~G~~C~~~~~~ 278 (683)
++|.++|+|. .... .+.|.|+ +||+|..|+..+..
T Consensus 12 ~pC~ngg~C~~~~~~~---------~~~C~C~-~G~~G~~Ce~~~~~ 48 (53)
T 1egf_A 12 GYCLNGGVCMHIESLD---------SYTCNCV-IGYSGDRCQTRDLR 48 (53)
T ss_dssp CSSCSSCEEEEESSSS---------CEEEECC-TTCCSSSSCCCSCC
T ss_pred CcCCCCcEEEeeCCCC---------CEEEECC-CCCcCCcCCccCcc
Confidence 4788999996 3322 5689999 99999999986433
No 82
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=95.73 E-value=0.0031 Score=52.39 Aligned_cols=45 Identities=27% Similarity=0.620 Sum_probs=34.0
Q ss_pred ccccccCCCCCC-----CCCccccCCCCcC-C--CCCCCceec----CCeeecCCCcccCC
Q 005688 257 KEECDCKYDGLL-----GQFCEVPVSSTCV-N--QCSGHGHCR----GGFCQCDSGWYGVD 305 (683)
Q Consensus 257 ~g~C~C~~~G~~-----G~~C~~~~~~~C~-~--~C~~~G~C~----~g~C~C~~G~~G~~ 305 (683)
.++|.|+ +||+ |..|+. .+.|. + .|. +|+|+ ..+|.|++||+|..
T Consensus 24 ~y~C~C~-~Gy~~~~~~g~~C~d--ideC~~~~~~C~-~~~C~n~~g~y~C~C~~G~~~~~ 80 (86)
T 1lmj_A 24 DFECKCD-EGYESGFMMMKNCMD--IDECQRDPLLCR-GGVCHNTEGSYRCECPPGHQLSP 80 (86)
T ss_dssp EEEECCC-SSEEECTTTSSSEEE--CCHHHHCSSTTT-TSEEEEETTEEEEESCTTSCCCS
T ss_pred CEEeeCC-CCcCccCCCCCccCC--cccccCCCCcCC-CCEeEcCCCCEEEECcCCcccCC
Confidence 5799999 9998 788873 35664 3 365 58997 34899999998753
No 83
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=95.69 E-value=0.0066 Score=54.08 Aligned_cols=56 Identities=20% Similarity=0.271 Sum_probs=37.7
Q ss_pred CCCCCCEEeCC---CC--ceeeCCCCcCCCCCccccCCCCCCCCCCCCCCCcccccCCCcccCCCceEeeCCCcccCCCC
Q 005688 126 DCSGQGVCNHE---LG--QCRCFHGFRGKGCSERIHFQCNFPKTPELPYGRWVVSICPTHCDTTRAMCFCGEGTKYPNRP 200 (683)
Q Consensus 126 ~C~~~G~C~~~---~G--~C~C~~G~~G~~Ce~~~~~~C~~~~~~~~~~g~~~~~~C~~~C~~~~g~C~C~~G~~G~~C~ 200 (683)
+|.|+|+|... .+ .|.|++||+|.+|++....+|..+ +.....+.|..++.|..|.
T Consensus 2 pC~nggtC~~~~~~~~~~~C~Cp~g~~G~~Ce~~~~~~C~~g-------------------~G~~YrG~~~~t~sG~~Cq 62 (122)
T 2fd6_A 2 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKSKTCYEG-------------------NGHFYRGKASTDTMGRPCL 62 (122)
T ss_dssp CCCSSCEEEECTTTTTCEEEECCTTEESTTSCEESSCCSBCS-------------------SCTTCCSCCCBBTTSCBBC
T ss_pred CCCCcCCcCCCcccCCCCCccCCCCCCCccccccCcCCCccc-------------------ccccceeeccccccCCccc
Confidence 69999999753 22 799999999999998632344321 1122355666777777663
No 84
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=95.69 E-value=0.0025 Score=47.89 Aligned_cols=38 Identities=21% Similarity=0.392 Sum_probs=27.8
Q ss_pred CCCccCCCCCCCcccc--CCcccccccccccccccccCCCCCCCCCcccc
Q 005688 228 LDNIFTTNGSKPGWCN--VDPEEAYALKVQFKEECDCKYDGLLGQFCEVP 275 (683)
Q Consensus 228 c~~~~~~~C~~~G~C~--~~~~~~~~~g~c~~g~C~C~~~G~~G~~C~~~ 275 (683)
|.....++|.++|+|. .... .+.|.|+ +||+|..|+..
T Consensus 6 C~~~~~~pC~nGG~C~~~~~~~---------~~~C~C~-~GytG~~Ce~~ 45 (53)
T 1nql_B 6 CPLSHDGYCLHDGVCMYIEALD---------KYACNCV-VGYIGERCQYR 45 (53)
T ss_dssp CCSTTCCEECTTCEEEEETTTT---------EEEEEEC-TTEESTTSCEE
T ss_pred cCCCCCCCCCCCeEEeeecCCC---------CEEEecC-CCCcCCCCCcC
Confidence 3333467788999995 2211 4689999 99999999875
No 85
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=95.62 E-value=0.011 Score=69.46 Aligned_cols=42 Identities=38% Similarity=0.813 Sum_probs=31.0
Q ss_pred ccccccCCCCCC---CCCccccCCCCcCC--CCCCCceec----CCeeecCCCccc
Q 005688 257 KEECDCKYDGLL---GQFCEVPVSSTCVN--QCSGHGHCR----GGFCQCDSGWYG 303 (683)
Q Consensus 257 ~g~C~C~~~G~~---G~~C~~~~~~~C~~--~C~~~G~C~----~g~C~C~~G~~G 303 (683)
.+.|.|+ +||. |..|+. .+.|.. .|+ ..|+ ..+|.|.+||.+
T Consensus 332 ~y~C~C~-~Gy~l~~g~~C~d--ideC~~~~~C~--~~C~n~~gsy~C~C~~Gy~l 382 (791)
T 3m0c_C 332 GYECLCP-DGFQLVAQRRCED--IDECQDPDTCS--QLCVNLEGGYKCQCEEGFQL 382 (791)
T ss_dssp SEEEECC-TTCEEETTTEEEC--CCCCSSSSSCT--TTCCBCSSCBCCCCCSSEEC
T ss_pred CcccCCC-CCCccCCCCcccc--CcccCCCCCCC--CeeecCCCCceeecCCCCEe
Confidence 4689999 9995 888974 346653 454 4676 458999999975
No 86
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=95.61 E-value=0.0036 Score=48.00 Aligned_cols=29 Identities=31% Similarity=0.739 Sum_probs=24.2
Q ss_pred CCCCCCEEeCC----CC--ceeeCCCCcCCCCCcc
Q 005688 126 DCSGQGVCNHE----LG--QCRCFHGFRGKGCSER 154 (683)
Q Consensus 126 ~C~~~G~C~~~----~G--~C~C~~G~~G~~Ce~~ 154 (683)
.|.|+|+|... .+ .|.|++||+|.+||..
T Consensus 15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G~~Ce~~ 49 (58)
T 3ltf_D 15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEYK 49 (58)
T ss_dssp TSCSSCEEEEEEETTEEEEEEEECTTEESSSSCEE
T ss_pred cCCCCCEEeCCccCCCCCEEeECCCCCccCCCccc
Confidence 69999999732 12 7999999999999975
No 87
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=95.58 E-value=0.0077 Score=64.45 Aligned_cols=17 Identities=24% Similarity=0.258 Sum_probs=14.0
Q ss_pred CceEeeCCCcccCCCCC
Q 005688 185 RAMCFCGEGTKYPNRPV 201 (683)
Q Consensus 185 ~g~C~C~~G~~G~~C~~ 201 (683)
.|+|.|..++.|..|+.
T Consensus 285 ~g~C~C~hnT~G~~CEr 301 (403)
T 2y38_A 285 RLQCACQHNTCGGSCDR 301 (403)
T ss_dssp CEEECCCTTEESSSCCE
T ss_pred ceEeECcCcCcCCCCCC
Confidence 36799999999998853
No 88
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=95.55 E-value=0.003 Score=67.79 Aligned_cols=61 Identities=26% Similarity=0.786 Sum_probs=13.4
Q ss_pred CCC-CCCCCCCCEEeCCCC--ceeeCCCCc----CCCCCccccCCCCCCCCCCCCCCCcccccCCCcccCCCc--eEeeC
Q 005688 121 KSC-KSDCSGQGVCNHELG--QCRCFHGFR----GKGCSERIHFQCNFPKTPELPYGRWVVSICPTHCDTTRA--MCFCG 191 (683)
Q Consensus 121 ~~C-~~~C~~~G~C~~~~G--~C~C~~G~~----G~~Ce~~~~~~C~~~~~~~~~~g~~~~~~C~~~C~~~~g--~C~C~ 191 (683)
++| .++|...++|....| .|.|++||. |..|+. .++|... ..|...|....| .|.|.
T Consensus 4 ~~C~~~~~~c~~~C~~~~g~~~C~C~~G~~l~~~~~~C~d--~~eC~~~------------~~C~~~C~~~~g~~~C~C~ 69 (386)
T 3v65_B 4 ENCNVNNGGCAQKCQMIRGAVQCTCHTGYRLTEDGRTCQD--VNECAEE------------GYCSQGCTNSEGAFQCWCE 69 (386)
T ss_dssp --------------------------------------------------------------CCTTEEC-----CCEECC
T ss_pred CcccCCCCCCCCCCcCCCCCcEeECCCCceECCCCCccCc--cceeCCc------------CcccCcCCCCCCCCeEEEC
Confidence 567 444333348865555 899999998 999954 5788621 257767777654 89999
Q ss_pred CCcc
Q 005688 192 EGTK 195 (683)
Q Consensus 192 ~G~~ 195 (683)
+||.
T Consensus 70 ~g~~ 73 (386)
T 3v65_B 70 AGYE 73 (386)
T ss_dssp TTEE
T ss_pred CCce
Confidence 9998
No 89
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=95.51 E-value=0.0049 Score=65.61 Aligned_cols=17 Identities=24% Similarity=0.350 Sum_probs=13.1
Q ss_pred CceEeeCCCcccCCCCC
Q 005688 185 RAMCFCGEGTKYPNRPV 201 (683)
Q Consensus 185 ~g~C~C~~G~~G~~C~~ 201 (683)
.+.|.|..||.|.+|+.
T Consensus 271 ~~~C~C~~nt~G~~Ce~ 287 (375)
T 4aqt_A 271 KLMCNCKHNTYGVDCEK 287 (375)
T ss_dssp CEEECCCTTEESTTSCE
T ss_pred CeeeeCcCCCcCCCccc
Confidence 34788999999888854
No 90
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=95.44 E-value=0.0058 Score=44.43 Aligned_cols=27 Identities=33% Similarity=0.940 Sum_probs=22.8
Q ss_pred CCCCCCceec--C----CeeecCCCcccCCCCCC
Q 005688 282 NQCSGHGHCR--G----GFCQCDSGWYGVDCSIP 309 (683)
Q Consensus 282 ~~C~~~G~C~--~----g~C~C~~G~~G~~C~~~ 309 (683)
++|.+ |+|. . ..|.|.+||+|..|++.
T Consensus 12 ~pC~n-G~C~~~~~~~~~~C~C~~GytG~~Ce~~ 44 (46)
T 1k36_A 12 GYCLH-GQCIYLVDMSQNYCRCEVGYTGVRCEHF 44 (46)
T ss_dssp SSCSS-EEEEEETTTTEEEEEECTTCSSTTSCCC
T ss_pred CCCCC-CEeeccCCCCCEEEECCCCCccCCCCcc
Confidence 57988 8996 2 37999999999999874
No 91
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=95.35 E-value=0.0042 Score=48.44 Aligned_cols=44 Identities=20% Similarity=0.277 Sum_probs=28.7
Q ss_pred CCCccCCCCCCCccccCCcccccccccccccccccCCCCCCCCCccccC
Q 005688 228 LDNIFTTNGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLLGQFCEVPV 276 (683)
Q Consensus 228 c~~~~~~~C~~~G~C~~~~~~~~~~g~c~~g~C~C~~~G~~G~~C~~~~ 276 (683)
|+.+..++|.|+|+|...... ..-..+.|.|+ +||+|..|+..+
T Consensus 6 c~~C~~~pC~ngG~C~~~~~~----~~~~~y~C~C~-~Gf~G~~Ce~~i 49 (63)
T 1hae_A 6 CAEKEKTFCVNGGECFMVKDL----SNPSRYLCKCQ-PGFTGARCTENV 49 (63)
T ss_dssp CCHHHHTTSCTTCEEEEEESS----SSSCCEEEECC-TTEESTTSCEEC
T ss_pred cCCCCCCcCCCCcEEecCCcc----CCCCCEEEECC-CCCcCCccCcCc
Confidence 333446789999999641000 00015689999 999999998753
No 92
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=95.28 E-value=0.0011 Score=62.23 Aligned_cols=60 Identities=22% Similarity=0.419 Sum_probs=33.0
Q ss_pred ccccccccccccCCCCcccccccCccc-CCC--CC---CCC--CCCCEEeCCCC------ceeeCCCCc-CCCCC
Q 005688 93 PWKAEIGRWLSGCDSVAKEVDLVEMIG-GKS--CK---SDC--SGQGVCNHELG------QCRCFHGFR-GKGCS 152 (683)
Q Consensus 93 ~~~~~~g~~~~~c~~~~~~~~~~~~~~-~~~--C~---~~C--~~~G~C~~~~G------~C~C~~G~~-G~~Ce 152 (683)
......|.|...|+.++.....+..+. .++ |. ..| .++++|....+ +|.|++||. |..|+
T Consensus 16 ~C~n~~gsy~C~C~~Gy~~~~~g~~C~d~~~~~C~~~~~~c~~~~~~~C~~~~~~~~~~~~C~C~~G~~~~~~C~ 90 (162)
T 1uzk_A 16 NCVNTPGSYICDCPPDFELNPTRVGCVDTRSGNCYLDIRPRGDNGDTACSNEIGVGVSKASCCCSLGKAWGTPCE 90 (162)
T ss_dssp EEEEETTEEEEECCTTCEECTTSSBEECCCCEEEEEEC----------CEEEEEEEECHHHHHTTTCCEETTTTE
T ss_pred EeECCCCCEEEeCCCCCeECCCCCcccCCCCCcccCCCcccCCCCCCcccCCcCCcccCceeeCCCCCCcCCCcc
Confidence 344568899999998887322222221 122 52 223 45788975433 799999998 77776
No 93
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=95.05 E-value=0.0062 Score=56.72 Aligned_cols=41 Identities=34% Similarity=0.751 Sum_probs=31.4
Q ss_pred ccCCCC-CCCCCCCCEEeCCCC--ceeeCCCCcCCCCCccccCCCC
Q 005688 118 IGGKSC-KSDCSGQGVCNHELG--QCRCFHGFRGKGCSERIHFQCN 160 (683)
Q Consensus 118 ~~~~~C-~~~C~~~G~C~~~~G--~C~C~~G~~G~~Ce~~~~~~C~ 160 (683)
|....| +.+|.++|+|....+ +|.|++||.|..||.. ++|.
T Consensus 117 Ce~~~c~~~~C~~~g~C~~~~~~~~c~C~~g~~G~~Ce~~--~~c~ 160 (162)
T 1g1s_A 117 CYTASCQDMSCSKQGECLETIGNYTCSCYPGFYGPECEYV--RDDD 160 (162)
T ss_dssp EEECCCCTTGGGGSEEEEECSSSEEEEECTTEESTTSCEE--CC--
T ss_pred EEeCCCcCCCCCCCCEEecCCCCceEeCCCCCcCcccccC--cccC
Confidence 334678 678999999986554 8999999999999985 3564
No 94
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=94.83 E-value=0.014 Score=52.05 Aligned_cols=61 Identities=25% Similarity=0.379 Sum_probs=41.6
Q ss_pred CCCCCccccCCccccccccccccc-ccccCCCCCCCCCccccCCCCcCCCCCCCceecCCeeecCCCcccCCCCC
Q 005688 235 NGSKPGWCNVDPEEAYALKVQFKE-ECDCKYDGLLGQFCEVPVSSTCVNQCSGHGHCRGGFCQCDSGWYGVDCSI 308 (683)
Q Consensus 235 ~C~~~G~C~~~~~~~~~~g~c~~g-~C~C~~~G~~G~~C~~~~~~~C~~~C~~~G~C~~g~C~C~~G~~G~~C~~ 308 (683)
+|.|+|+|...... ... .|.|+ +||+|.+|++.+...|.. ++| ...++.|..+++|..|+.
T Consensus 2 pC~nggtC~~~~~~-------~~~~~C~Cp-~g~~G~~Ce~~~~~~C~~---g~G--~~YrG~~~~t~sG~~Cq~ 63 (122)
T 2fd6_A 2 DCLNGGTCVSNKYF-------SNIHWCNCP-KKFGGQHCEIDKSKTCYE---GNG--HFYRGKASTDTMGRPCLP 63 (122)
T ss_dssp CCCSSCEEEECTTT-------TTCEEEECC-TTEESTTSCEESSCCSBC---SSC--TTCCSCCCBBTTSCBBCC
T ss_pred CCCCcCCcCCCccc-------CCCCCccCC-CCCCCccccccCcCCCcc---ccc--ccceeeccccccCCcccC
Confidence 57888898543100 023 89999 999999999864333332 122 356888999999999976
No 95
>2ddu_A Reelin; beta-jelly-roll, signaling protein; 2.05A {Mus musculus}
Probab=94.67 E-value=0.0051 Score=64.86 Aligned_cols=31 Identities=39% Similarity=0.897 Sum_probs=27.5
Q ss_pred CCCCCCCCCCCEEeCCCCceeeCCCCcCCC--CCc
Q 005688 121 KSCKSDCSGQGVCNHELGQCRCFHGFRGKG--CSE 153 (683)
Q Consensus 121 ~~C~~~C~~~G~C~~~~G~C~C~~G~~G~~--Ce~ 153 (683)
..||+.|+|||.|+ .|+|.|.+||.|.+ |..
T Consensus 192 ~~Cp~~CsGhG~C~--~g~C~Cd~G~~g~d~~C~~ 224 (387)
T 2ddu_A 192 EPCPSYCSGHGDCI--SGVCFCDLGYTAAQGTCVS 224 (387)
T ss_dssp SCCGGGGGGSEEEE--TTEEEECTTEEEETTEEEE
T ss_pred ccCccccCCCceec--CCeEEecCCcccCCCcccc
Confidence 46999999999998 69999999999975 764
No 96
>2ddu_A Reelin; beta-jelly-roll, signaling protein; 2.05A {Mus musculus}
Probab=94.39 E-value=0.0069 Score=63.89 Aligned_cols=31 Identities=42% Similarity=1.082 Sum_probs=28.0
Q ss_pred CCcCCCCCCCceecCCeeecCCCcccCC--CCC
Q 005688 278 STCVNQCSGHGHCRGGFCQCDSGWYGVD--CSI 308 (683)
Q Consensus 278 ~~C~~~C~~~G~C~~g~C~C~~G~~G~~--C~~ 308 (683)
..|++.|++||.|+.|.|.|++||.|.+ |..
T Consensus 192 ~~Cp~~CsGhG~C~~g~C~Cd~G~~g~d~~C~~ 224 (387)
T 2ddu_A 192 EPCPSYCSGHGDCISGVCFCDLGYTAAQGTCVS 224 (387)
T ss_dssp SCCGGGGGGSEEEETTEEEECTTEEEETTEEEE
T ss_pred ccCccccCCCceecCCeEEecCCcccCCCcccc
Confidence 4789999999999999999999999986 754
No 97
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=94.34 E-value=0.018 Score=44.04 Aligned_cols=28 Identities=29% Similarity=0.803 Sum_probs=23.8
Q ss_pred CCCCCceec--C--C----eeecCCCcccCCCCCCc
Q 005688 283 QCSGHGHCR--G--G----FCQCDSGWYGVDCSIPS 310 (683)
Q Consensus 283 ~C~~~G~C~--~--g----~C~C~~G~~G~~C~~~~ 310 (683)
+|.|+|+|. . + .|.|.+||+|..|+...
T Consensus 15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G~~Ce~~~ 50 (58)
T 3ltf_D 15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEYKE 50 (58)
T ss_dssp TSCSSCEEEEEEETTEEEEEEEECTTEESSSSCEEC
T ss_pred cCCCCCEEeCCccCCCCCEEeECCCCCccCCCcccC
Confidence 699999996 2 2 79999999999998754
No 98
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=93.92 E-value=0.021 Score=64.06 Aligned_cols=34 Identities=35% Similarity=0.922 Sum_probs=29.4
Q ss_pred CCC-CCCCCCCCEEeC-CCC--ceeeC-CCCcCCCCCcc
Q 005688 121 KSC-KSDCSGQGVCNH-ELG--QCRCF-HGFRGKGCSER 154 (683)
Q Consensus 121 ~~C-~~~C~~~G~C~~-~~G--~C~C~-~G~~G~~Ce~~ 154 (683)
++| +++|.|+|+|.. ..+ +|.|+ +||+|.+||..
T Consensus 3 d~C~~~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~~ 41 (553)
T 1q4g_A 3 NPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCTIP 41 (553)
T ss_dssp CGGGGCCCCTTCEEEEETTTEEEEECTTSSEETTTTCEE
T ss_pred CcCCCCCCCCCCCcCCCCCCceEeeCCCCCcCCCCCCCC
Confidence 678 789999999986 344 89999 99999999974
No 99
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=93.79 E-value=0.56 Score=54.18 Aligned_cols=123 Identities=21% Similarity=0.377 Sum_probs=60.4
Q ss_pred CCCCCEEeCCCCcee----eCCCCcCCCCCccccCCCCCCCCCCCCCCCcccccCC-CcccCC----CceEeeCCCcccC
Q 005688 127 CSGQGVCNHELGQCR----CFHGFRGKGCSERIHFQCNFPKTPELPYGRWVVSICP-THCDTT----RAMCFCGEGTKYP 197 (683)
Q Consensus 127 C~~~G~C~~~~G~C~----C~~G~~G~~Ce~~~~~~C~~~~~~~~~~g~~~~~~C~-~~C~~~----~g~C~C~~G~~G~ 197 (683)
|. +|.|+...-.|. |..|..+..|... ..|..+.. -.|. +.|... .+.+.|..|..+.
T Consensus 222 C~-~g~Ci~~~~~Cdg~~dC~dgsde~~C~~~--~~C~~~~~----------~~C~~g~Ci~~~~~Cd~~~dC~dgsDe~ 288 (699)
T 1n7d_A 222 CS-DGNCIHGSRQCDREYDCKDMSDEVGCVNV--TLCEGPNK----------FKCHSGECITLDKVCNMARDCRDWSDEP 288 (699)
T ss_dssp SS-SSCEEETTCCSSSCCCSSSSCSSSSTTCC--CCCCSTTC----------CCCTTSCCCCSSCCSCSSCCSSSSCSCC
T ss_pred cC-CCceeeeecccCCCCCCCCCCccCCCCCC--CcccCCCc----------eecCCCcEeCCcccccccceecCccccc
Confidence 55 467876555665 8888887777642 23421100 0121 222111 2345566555443
Q ss_pred C--CCCC------CCCC-CcccCCCCCCCCCCCCCc---cCCCCCccCCCCCCCccccCCcccccccccccccccccCCC
Q 005688 198 N--RPVA------EACG-FQVNLPSQPGAPKSTDWA---KADLDNIFTTNGSKPGWCNVDPEEAYALKVQFKEECDCKYD 265 (683)
Q Consensus 198 ~--C~~~------~~C~-~~~~~~~~~~~~C~~gw~---g~~c~~~~~~~C~~~G~C~~~~~~~~~~g~c~~g~C~C~~~ 265 (683)
. |... ..|. .+.+.+..+.|.|.+||. |..|+.+ ..|...+.|... |.+. --.++|.|. +
T Consensus 289 ~~~C~~~eC~~~~~~C~~~C~~~~~~~~C~C~~G~~~~~~~~C~di--deC~~~~~C~~~---C~n~--~g~y~C~C~-~ 360 (699)
T 1n7d_A 289 IKECGTNECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRRCEDI--DECQDPDTCSQL---CVNL--EGGYKCQCE-E 360 (699)
T ss_dssp CSSCCCCCTTSSTTTSCTTCCCCTTCCCCCCCSSSCCCSSSCCCCC--CCCSSSSSCTTT---CCBC--SSCBCCCCC-S
T ss_pred ccccccccccccccCcCCCcccCCCCcEEeCCCCeEcCCCCcccCc--cccCCCCccccc---cccC--CCCeeeeee-c
Confidence 2 3211 0121 222334456678999998 6667532 234333334221 1110 015699998 9
Q ss_pred CCCCC
Q 005688 266 GLLGQ 270 (683)
Q Consensus 266 G~~G~ 270 (683)
||.+.
T Consensus 361 G~~~~ 365 (699)
T 1n7d_A 361 GFQLD 365 (699)
T ss_dssp SCBCC
T ss_pred ccccC
Confidence 99863
No 100
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=93.76 E-value=0.028 Score=60.44 Aligned_cols=44 Identities=36% Similarity=0.749 Sum_probs=34.0
Q ss_pred ccccccCCCCCC---CCCccccCCCCcC--CCCCCCceec----CCeeecCCCcccCC
Q 005688 257 KEECDCKYDGLL---GQFCEVPVSSTCV--NQCSGHGHCR----GGFCQCDSGWYGVD 305 (683)
Q Consensus 257 ~g~C~C~~~G~~---G~~C~~~~~~~C~--~~C~~~G~C~----~g~C~C~~G~~G~~ 305 (683)
.+.|.|+ +||. |..|+. .+.|. ..|++ +|. ...|.|.+||.+..
T Consensus 20 ~y~C~C~-~G~~~~~~~~C~d--ideC~~~~~C~~--~C~n~~g~~~C~C~~g~~~~~ 72 (400)
T 3p5b_L 20 GYECLCP-DGFQLVAQRRCED--IDECQDPDTCSQ--LCVNLEGGYKCQCEEGFQLDP 72 (400)
T ss_dssp SEEEECC-TTEEECSSSCEEE--CCCCSTTSSCSS--CCBCCSSSCBCCCCTTCCCCT
T ss_pred CeEEECC-CCCCcCCCCcccC--chhhhccCCCCC--ccCCCccceeeeccccccccc
Confidence 5799999 9998 889974 35664 56765 786 34899999998763
No 101
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=93.40 E-value=0.022 Score=43.96 Aligned_cols=33 Identities=30% Similarity=0.872 Sum_probs=26.1
Q ss_pred CCcC-CCCCCC--ceec----CCeeecCCCcc-cCCCCCCc
Q 005688 278 STCV-NQCSGH--GHCR----GGFCQCDSGWY-GVDCSIPS 310 (683)
Q Consensus 278 ~~C~-~~C~~~--G~C~----~g~C~C~~G~~-G~~C~~~~ 310 (683)
+.|. ++|.++ |+|+ ...|.|++||+ |.+|+...
T Consensus 12 d~C~snPC~nga~gtC~~~~g~y~C~C~~Gy~~G~~C~~~~ 52 (61)
T 2k2s_B 12 AACSSNPCGPEAAGTCKETNSGYICRCNQGYRISLDGTGNV 52 (61)
T ss_dssp CHHHHCSSCSSSCCEEEECSSEEEEECCTTEEEEECSSSCE
T ss_pred CcCcCCCCcCCCccccccCCCceEeECCCCCccCCCCCCCC
Confidence 3553 789998 8997 23899999999 99997643
No 102
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=93.10 E-value=0.059 Score=39.78 Aligned_cols=28 Identities=32% Similarity=0.873 Sum_probs=22.2
Q ss_pred CCCCCCCEEe--CCCC--ceeeCCCCcCCCCCc
Q 005688 125 SDCSGQGVCN--HELG--QCRCFHGFRGKGCSE 153 (683)
Q Consensus 125 ~~C~~~G~C~--~~~G--~C~C~~G~~G~~Ce~ 153 (683)
+.|.| |+|. ...+ .|.|+.||+|+.||.
T Consensus 18 ~yC~n-G~C~~i~~~~~~~C~C~~gy~G~RCe~ 49 (50)
T 2rnl_A 18 NFCIH-GECKYIEHLEAVTCKCQQEYFGERCGE 49 (50)
T ss_dssp GTCSS-SEEEEETTTTEEEEECCSSCCSSSCCC
T ss_pred CcCCC-CEEEEecCCCCeeEECCCCcccccccc
Confidence 56885 7997 3333 699999999999985
No 103
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=92.92 E-value=0.034 Score=62.51 Aligned_cols=34 Identities=29% Similarity=0.935 Sum_probs=28.7
Q ss_pred CCC-CCCCCCCCEEeC-CCC--ceeeC-CCCcCCCCCcc
Q 005688 121 KSC-KSDCSGQGVCNH-ELG--QCRCF-HGFRGKGCSER 154 (683)
Q Consensus 121 ~~C-~~~C~~~G~C~~-~~G--~C~C~-~G~~G~~Ce~~ 154 (683)
++| +++|.|+|+|.. ..+ .|.|+ +||+|.+||..
T Consensus 2 d~C~s~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~~ 40 (587)
T 3nt1_A 2 NPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCTTP 40 (587)
T ss_dssp CTTTTCCCCTTCEEEEEETTEEEEECTTSSEETTTTCEE
T ss_pred CCCCCCCCCCCCEeeCCCCCCeEEecCCCCccCCCCCCc
Confidence 578 789999999984 223 89999 99999999974
No 104
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=92.83 E-value=0.037 Score=40.87 Aligned_cols=29 Identities=28% Similarity=0.666 Sum_probs=23.2
Q ss_pred CCCCCCCEEe--CCCC--ceeeCCCCcCCCCCcc
Q 005688 125 SDCSGQGVCN--HELG--QCRCFHGFRGKGCSER 154 (683)
Q Consensus 125 ~~C~~~G~C~--~~~G--~C~C~~G~~G~~Ce~~ 154 (683)
+.|.| |+|. ...+ .|.|++||+|+.||..
T Consensus 14 ~yC~n-G~C~~~~~~~~~~C~C~~gy~G~RCe~~ 46 (50)
T 1iox_A 14 HYCIK-GRCRFVVAEQTPSCVCDEGYIGARCERV 46 (50)
T ss_dssp TSCTT-CCEEEETTTTEEEECCCTTEETTTTCEE
T ss_pred CcccC-CEEEeEcCCCCeEEECCCCcccCCCCee
Confidence 56888 8995 2333 6999999999999975
No 105
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=92.56 E-value=0.088 Score=61.77 Aligned_cols=20 Identities=25% Similarity=0.823 Sum_probs=14.3
Q ss_pred cCCCcccCCCc--eEeeCCCcc
Q 005688 176 ICPTHCDTTRA--MCFCGEGTK 195 (683)
Q Consensus 176 ~C~~~C~~~~g--~C~C~~G~~ 195 (683)
.|...|....+ .|.|++||.
T Consensus 321 ~C~~~C~~~~~~y~C~C~~Gy~ 342 (791)
T 3m0c_C 321 GCSHVCNDLKIGYECLCPDGFQ 342 (791)
T ss_dssp GCSSEEEECSBSEEEECCTTCE
T ss_pred CccccccCCCCCcccCCCCCCc
Confidence 45566766543 899999996
No 106
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=92.17 E-value=0.066 Score=49.72 Aligned_cols=35 Identities=34% Similarity=0.787 Sum_probs=28.6
Q ss_pred CCCC-CCCCCCCCEEeCCCC--ceeeCCCCcCCCCCcc
Q 005688 120 GKSC-KSDCSGQGVCNHELG--QCRCFHGFRGKGCSER 154 (683)
Q Consensus 120 ~~~C-~~~C~~~G~C~~~~G--~C~C~~G~~G~~Ce~~ 154 (683)
...| ++.|+++|+|....+ +|.|.+||.|..|+..
T Consensus 119 ~~~~~~~~C~~~g~C~~~~~~~~c~C~~g~~g~~C~~~ 156 (164)
T 3cfw_A 119 TASCQPWSCSGHGECVEIINNYTCNCDVGYYGPQCQFV 156 (164)
T ss_dssp ECCCCTTSSCSSEEEEEETTEEEEEECTTCBSSSSCBC
T ss_pred cCCCCCCcCCCCCeecccCCCceeeeCCCccccccccc
Confidence 3456 678999999985433 8999999999999974
No 107
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=91.04 E-value=0.059 Score=57.58 Aligned_cols=47 Identities=28% Similarity=0.776 Sum_probs=18.1
Q ss_pred ccccccCCCCCC----CCCccccCCCCcC--CCCCCCceec----CCeeecCCCcc----cCCCCC
Q 005688 257 KEECDCKYDGLL----GQFCEVPVSSTCV--NQCSGHGHCR----GGFCQCDSGWY----GVDCSI 308 (683)
Q Consensus 257 ~g~C~C~~~G~~----G~~C~~~~~~~C~--~~C~~~G~C~----~g~C~C~~G~~----G~~C~~ 308 (683)
.++|.|+ +||. |..|+. .+.|. ..|++. |. ..+|.|.+||. |..|..
T Consensus 23 ~~~C~C~-~G~~l~~~~~~C~d--~~eC~~~~~C~~~--C~~~~g~~~C~C~~g~~l~~d~~~C~~ 83 (386)
T 3v65_B 23 AVQCTCH-TGYRLTEDGRTCQD--VNECAEEGYCSQG--CTNSEGAFQCWCEAGYELRPDRRSCKA 83 (386)
T ss_dssp --------------------------------CCTTE--EC-----CCEECCTTEEECTTSSCEEE
T ss_pred CcEeECC-CCceECCCCCccCc--cceeCCcCcccCc--CCCCCCCCeEEECCCceEcCCCCeECC
Confidence 3689999 9998 999953 35674 578753 86 34899999998 777864
No 108
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=91.00 E-value=0.13 Score=37.89 Aligned_cols=29 Identities=28% Similarity=0.754 Sum_probs=22.6
Q ss_pred CCCCCCCEEeCCC----CceeeCCCCcCCCCCcc
Q 005688 125 SDCSGQGVCNHEL----GQCRCFHGFRGKGCSER 154 (683)
Q Consensus 125 ~~C~~~G~C~~~~----G~C~C~~G~~G~~Ce~~ 154 (683)
+.|.| |+|.... -.|.|++||+|+.|+..
T Consensus 14 ~yC~n-G~C~~~~~~~~~~C~C~~gy~G~RCe~~ 46 (50)
T 3e50_C 14 QFCFH-GTCRFLVQEDKPACVCHSGYVGARCEHA 46 (50)
T ss_pred CcccC-CEEeeccCCCCeEEECCCCCcccCCCce
Confidence 46886 5997422 28999999999999964
No 109
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=90.62 E-value=0.06 Score=49.89 Aligned_cols=28 Identities=36% Similarity=0.926 Sum_probs=23.0
Q ss_pred CCCCCCceec----CCeeecCCCcccCCCCCC
Q 005688 282 NQCSGHGHCR----GGFCQCDSGWYGVDCSIP 309 (683)
Q Consensus 282 ~~C~~~G~C~----~g~C~C~~G~~G~~C~~~ 309 (683)
++|.++|+|. ..+|.|.+||+|..|++-
T Consensus 125 ~~C~~~g~C~~~~~~~~c~C~~g~~G~~Ce~~ 156 (162)
T 1g1s_A 125 MSCSKQGECLETIGNYTCSCYPGFYGPECEYV 156 (162)
T ss_dssp TGGGGSEEEEECSSSEEEEECTTEESTTSCEE
T ss_pred CCCCCCCEEecCCCCceEeCCCCCcCcccccC
Confidence 5688889997 338999999999999874
No 110
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=90.49 E-value=0.086 Score=59.04 Aligned_cols=31 Identities=32% Similarity=0.905 Sum_probs=27.0
Q ss_pred CCCCCCCceecC-----CeeecC-CCcccCCCCCCcc
Q 005688 281 VNQCSGHGHCRG-----GFCQCD-SGWYGVDCSIPSV 311 (683)
Q Consensus 281 ~~~C~~~G~C~~-----g~C~C~-~G~~G~~C~~~~~ 311 (683)
+++|.|+|+|.+ .+|.|. +||+|.+|+++..
T Consensus 7 ~~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~~~~ 43 (553)
T 1q4g_A 7 YYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCTIPEI 43 (553)
T ss_dssp GCCCCTTCEEEEETTTEEEEECTTSSEETTTTCEECH
T ss_pred CCCCCCCCCcCCCCCCceEeeCCCCCcCCCCCCCCch
Confidence 478999999975 389999 9999999998653
No 111
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=90.36 E-value=0.11 Score=47.52 Aligned_cols=29 Identities=31% Similarity=0.760 Sum_probs=24.7
Q ss_pred CCCCCCEEeCC---CC--ceeeCCCCcCCCCCcc
Q 005688 126 DCSGQGVCNHE---LG--QCRCFHGFRGKGCSER 154 (683)
Q Consensus 126 ~C~~~G~C~~~---~G--~C~C~~G~~G~~Ce~~ 154 (683)
+|.|+|+|... .+ .|.|++||.|..|++.
T Consensus 14 pC~NGGtC~~~~~~s~~~~C~Cp~g~~G~~Cei~ 47 (145)
T 2i9a_A 14 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEID 47 (145)
T ss_dssp CCCTTCEEEECSSSTTCEEEECCTTEESTTSCEE
T ss_pred CCCCCCCcCCCccccCCccccCCCCCCCCceecc
Confidence 69999999643 23 7999999999999986
No 112
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=89.43 E-value=0.15 Score=41.21 Aligned_cols=28 Identities=29% Similarity=0.746 Sum_probs=21.7
Q ss_pred CCCCCCCEEeCCC----CceeeCCCCcCCCCCc
Q 005688 125 SDCSGQGVCNHEL----GQCRCFHGFRGKGCSE 153 (683)
Q Consensus 125 ~~C~~~G~C~~~~----G~C~C~~G~~G~~Ce~ 153 (683)
+.|.+ |+|.... -.|.|++||+|..||.
T Consensus 46 ~yCln-G~C~~i~~~~~~~C~C~~GYtG~RCE~ 77 (79)
T 1xdt_R 46 DFCIH-GECKYVKELRAPSCICHPGYHGERCHG 77 (79)
T ss_dssp TCCSS-EEECCBGGGTBCCEEECTTEESTTCCE
T ss_pred CcCCC-CEeeeecCCCCeEEEcCCCcccccccc
Confidence 56876 5994322 2799999999999986
No 113
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=89.28 E-value=0.098 Score=48.03 Aligned_cols=36 Identities=33% Similarity=0.896 Sum_probs=29.1
Q ss_pred cCCCC-CCCCCCCCEEeCCCC--ceeeCCCCcCCCCCcc
Q 005688 119 GGKSC-KSDCSGQGVCNHELG--QCRCFHGFRGKGCSER 154 (683)
Q Consensus 119 ~~~~C-~~~C~~~G~C~~~~G--~C~C~~G~~G~~Ce~~ 154 (683)
....| +++|.++|+|....+ .|.|.+||+|+.||+.
T Consensus 118 e~~~~~~~pc~~~g~C~~~~~~~~c~C~~g~~g~~Ce~~ 156 (157)
T 1g1t_A 118 YTAACTNTSCSGHGECVETINNYTCKCDPGFSGLKCEQI 156 (157)
T ss_dssp EECCCCTTGGGGSEEEEEETTEEEEEECTTEESTTSCEE
T ss_pred CcCCCCCCCCCCCCEeecCCCCeeEECCCCccCcccccc
Confidence 34667 568999999975444 8999999999999964
No 114
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=88.98 E-value=0.12 Score=38.10 Aligned_cols=28 Identities=36% Similarity=0.914 Sum_probs=21.8
Q ss_pred CCCCCCceec------CCeeecCCCcccCCCCCCc
Q 005688 282 NQCSGHGHCR------GGFCQCDSGWYGVDCSIPS 310 (683)
Q Consensus 282 ~~C~~~G~C~------~g~C~C~~G~~G~~C~~~~ 310 (683)
+-|.+ |+|. ...|.|.+||+|..|+...
T Consensus 14 ~yC~n-G~C~~~~~~~~~~C~C~~gy~G~RCe~~~ 47 (50)
T 1iox_A 14 HYCIK-GRCRFVVAEQTPSCVCDEGYIGARCERVD 47 (50)
T ss_dssp TSCTT-CCEEEETTTTEEEECCCTTEETTTTCEEC
T ss_pred CcccC-CEEEeEcCCCCeEEECCCCcccCCCCeec
Confidence 45777 7885 2379999999999998743
No 115
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=88.90 E-value=0.15 Score=47.16 Aligned_cols=29 Identities=45% Similarity=1.106 Sum_probs=24.4
Q ss_pred CCCCCCceec----CCeeecCCCcccCCCCCCc
Q 005688 282 NQCSGHGHCR----GGFCQCDSGWYGVDCSIPS 310 (683)
Q Consensus 282 ~~C~~~G~C~----~g~C~C~~G~~G~~C~~~~ 310 (683)
+.|+++|+|. .+.|.|.+||+|..|+...
T Consensus 125 ~~C~~~g~C~~~~~~~~c~C~~g~~g~~C~~~~ 157 (164)
T 3cfw_A 125 WSCSGHGECVEIINNYTCNCDVGYYGPQCQFVQ 157 (164)
T ss_dssp TSSCSSEEEEEETTEEEEEECTTCBSSSSCBC-
T ss_pred CcCCCCCeecccCCCceeeeCCCcccccccccc
Confidence 5799999997 4599999999999998644
No 116
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=88.59 E-value=0.15 Score=57.28 Aligned_cols=30 Identities=37% Similarity=1.062 Sum_probs=26.2
Q ss_pred CCCCCCCceecC-----CeeecC-CCcccCCCCCCc
Q 005688 281 VNQCSGHGHCRG-----GFCQCD-SGWYGVDCSIPS 310 (683)
Q Consensus 281 ~~~C~~~G~C~~-----g~C~C~-~G~~G~~C~~~~ 310 (683)
+++|.|+|+|.+ ..|.|. +||+|.+|+++.
T Consensus 6 s~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~~~ 41 (587)
T 3nt1_A 6 SNPCQNRGECMSTGFDQYKCDCTRTGFYGENCTTPE 41 (587)
T ss_dssp TCCCCTTCEEEEEETTEEEEECTTSSEETTTTCEEC
T ss_pred CCCCCCCCEeeCCCCCCeEEecCCCCccCCCCCCch
Confidence 579999999972 389999 999999999864
No 117
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=88.58 E-value=0.17 Score=46.23 Aligned_cols=61 Identities=26% Similarity=0.415 Sum_probs=38.6
Q ss_pred CCCCCccccCCccccccccccccc-ccccCCCCCCCCCccccCCCCcCCCCCCCceecCCeeecCCCcccCCCCC
Q 005688 235 NGSKPGWCNVDPEEAYALKVQFKE-ECDCKYDGLLGQFCEVPVSSTCVNQCSGHGHCRGGFCQCDSGWYGVDCSI 308 (683)
Q Consensus 235 ~C~~~G~C~~~~~~~~~~g~c~~g-~C~C~~~G~~G~~C~~~~~~~C~~~C~~~G~C~~g~C~C~~G~~G~~C~~ 308 (683)
+|.|+|+|..... .... .|.|+ +||+|.+|++.+...|.. ++|. ..+.......+|..|+.
T Consensus 14 pC~NGGtC~~~~~-------~s~~~~C~Cp-~g~~G~~Cei~~~~~C~~---g~G~--~YrG~~s~T~sG~~Cq~ 75 (145)
T 2i9a_A 14 DCLNGGTCVSNKY-------FSNIHWCNCP-KKFGGQHCEIDKSKTCYE---GNGH--FYRGKASTDTMGRPCLP 75 (145)
T ss_dssp CCCTTCEEEECSS-------STTCEEEECC-TTEESTTSCEESSCCEEC---TTCT--TCCSCCCBBTTSCBCCC
T ss_pred CCCCCCCcCCCcc-------ccCCccccCC-CCCCCCceeccccccCCC---CCcc--ccccceecCCcCCcccC
Confidence 6888999843210 0122 79999 999999999874434432 1232 34556666677777764
No 118
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=88.30 E-value=0.055 Score=49.49 Aligned_cols=47 Identities=26% Similarity=0.613 Sum_probs=33.4
Q ss_pred ceeeCCCCc---CCCCCccccCCCCCCCCCCCCCCCcccccCC-CcccCCCc--eEeeCCCcccCC
Q 005688 139 QCRCFHGFR---GKGCSERIHFQCNFPKTPELPYGRWVVSICP-THCDTTRA--MCFCGEGTKYPN 198 (683)
Q Consensus 139 ~C~C~~G~~---G~~Ce~~~~~~C~~~~~~~~~~g~~~~~~C~-~~C~~~~g--~C~C~~G~~G~~ 198 (683)
.|.|++||+ |..|+. .++|..... .|. +.|....| .|.|++||+|..
T Consensus 89 ~C~C~~Gy~~~~g~~C~d--ideC~~~~~-----------~C~~g~C~n~~g~y~C~C~~Gy~g~~ 141 (147)
T 2w86_A 89 DPICGKGYSRIKGTQCED--IDECEVFPG-----------VCKNGLCVNTRGSFKCQCPSGMTLDA 141 (147)
T ss_dssp CTTTCTTEEEEETTEEEE--CCHHHHSTT-----------CSSSSEEEEETTEEEEECCTTCCBCT
T ss_pred cccCCCccccCCCCccCc--cccccCCCC-----------CCCCCEEECCCCCEEeeCCCCCccCC
Confidence 678999994 999983 577764221 354 45666555 899999999754
No 119
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=87.29 E-value=0.28 Score=36.09 Aligned_cols=27 Identities=33% Similarity=0.800 Sum_probs=20.8
Q ss_pred CCCCCCceec------CCeeecCCCcccCCCCCC
Q 005688 282 NQCSGHGHCR------GGFCQCDSGWYGVDCSIP 309 (683)
Q Consensus 282 ~~C~~~G~C~------~g~C~C~~G~~G~~C~~~ 309 (683)
+-|.++ +|. ...|.|.+||+|..|+..
T Consensus 14 ~yC~nG-~C~~~~~~~~~~C~C~~gy~G~RCe~~ 46 (50)
T 3e50_C 14 QFCFHG-TCRFLVQEDKPACVCHSGYVGARCEHA 46 (50)
T ss_pred CcccCC-EEeeccCCCCeEEECCCCCcccCCCce
Confidence 346654 885 348999999999999864
No 120
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=87.01 E-value=0.13 Score=47.29 Aligned_cols=28 Identities=43% Similarity=1.076 Sum_probs=23.4
Q ss_pred CCCCCCceecC----CeeecCCCcccCCCCCC
Q 005688 282 NQCSGHGHCRG----GFCQCDSGWYGVDCSIP 309 (683)
Q Consensus 282 ~~C~~~G~C~~----g~C~C~~G~~G~~C~~~ 309 (683)
++|.++|.|.+ ..|.|.+||+|..|++.
T Consensus 125 ~pc~~~g~C~~~~~~~~c~C~~g~~g~~Ce~~ 156 (157)
T 1g1t_A 125 TSCSGHGECVETINNYTCKCDPGFSGLKCEQI 156 (157)
T ss_dssp TGGGGSEEEEEETTEEEEEECTTEESTTSCEE
T ss_pred CCCCCCCEeecCCCCeeEECCCCccCcccccc
Confidence 57888899973 38999999999999864
No 121
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=86.86 E-value=0.66 Score=42.15 Aligned_cols=49 Identities=14% Similarity=0.069 Sum_probs=38.0
Q ss_pred chhHHHHhhcCceecccCC-CCCchhHHHHHhcCceeEEeeC-Ceeecccc
Q 005688 628 SENYHEDLSSSVFCGVLPG-DGWSGRMEDSILQGCIPVVIQC-KFIFSTTL 676 (683)
Q Consensus 628 ~~~y~~~m~~S~FCL~p~G-d~~s~Rl~dAi~~GCIPViisD-~~~l~~~~ 676 (683)
..++.+.|+.+.+.+.|.- .+++.-++|||.+|+||||..+ .-.+..++
T Consensus 65 ~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~~~~~~ 115 (166)
T 3qhp_A 65 SNELLEILKTCTLYVHAANVESEAIACLEAISVGIVPVIANSPLSATRQFA 115 (166)
T ss_dssp HHHHHHHHTTCSEEEECCCSCCCCHHHHHHHHTTCCEEEECCTTCGGGGGC
T ss_pred HHHHHHHHHhCCEEEECCcccCccHHHHHHHhcCCCcEEeeCCCCchhhhc
Confidence 4667899999999998875 4677789999999999999944 33344443
No 122
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=86.22 E-value=0.34 Score=35.66 Aligned_cols=26 Identities=31% Similarity=0.939 Sum_probs=20.4
Q ss_pred CCCCCCceec------CCeeecCCCcccCCCCC
Q 005688 282 NQCSGHGHCR------GGFCQCDSGWYGVDCSI 308 (683)
Q Consensus 282 ~~C~~~G~C~------~g~C~C~~G~~G~~C~~ 308 (683)
+-|.+ |+|. ...|.|.+||+|..|+.
T Consensus 18 ~yC~n-G~C~~i~~~~~~~C~C~~gy~G~RCe~ 49 (50)
T 2rnl_A 18 NFCIH-GECKYIEHLEAVTCKCQQEYFGERCGE 49 (50)
T ss_dssp GTCSS-SEEEEETTTTEEEEECCSSCCSSSCCC
T ss_pred CcCCC-CEEEEecCCCCeeEECCCCcccccccc
Confidence 45665 6996 23799999999999985
No 123
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=85.39 E-value=0.34 Score=39.15 Aligned_cols=26 Identities=31% Similarity=0.856 Sum_probs=20.6
Q ss_pred CCCCCCceec------CCeeecCCCcccCCCCC
Q 005688 282 NQCSGHGHCR------GGFCQCDSGWYGVDCSI 308 (683)
Q Consensus 282 ~~C~~~G~C~------~g~C~C~~G~~G~~C~~ 308 (683)
+.|.+ |+|. ...|.|.+||+|..|+.
T Consensus 46 ~yCln-G~C~~i~~~~~~~C~C~~GYtG~RCE~ 77 (79)
T 1xdt_R 46 DFCIH-GECKYVKELRAPSCICHPGYHGERCHG 77 (79)
T ss_dssp TCCSS-EEECCBGGGTBCCEEECTTEESTTCCE
T ss_pred CcCCC-CEeeeecCCCCeEEEcCCCcccccccc
Confidence 46766 4894 34799999999999985
No 124
>3t3p_B Integrin beta-3; integrin, cell adhesion, blood clotting, fibrinogen, platele; HET: NAG BMA MAN; 2.20A {Homo sapiens} PDB: 3t3m_B* 3nig_B* 3nif_B* 3nid_B* 2vdr_B* 2vc2_B* 2vdk_B* 2vdm_B* 2vdn_B* 2vdl_B* 2vdp_B* 2vdq_B* 2vdo_B* 3fcu_B* 1txv_B* 1ty3_B* 1ty5_B* 1ty6_B* 1ty7_B* 1tye_B*
Probab=84.26 E-value=0.41 Score=52.01 Aligned_cols=26 Identities=38% Similarity=1.248 Sum_probs=18.5
Q ss_pred CCCC-CCceecCCeeecCCCcccCCCC
Q 005688 282 NQCS-GHGHCRGGFCQCDSGWYGVDCS 307 (683)
Q Consensus 282 ~~C~-~~G~C~~g~C~C~~G~~G~~C~ 307 (683)
..|+ ++|+..-|.|.|.+||.|..|+
T Consensus 446 ~~C~~g~G~~~CG~C~C~~G~~G~~Ce 472 (472)
T 3t3p_B 446 HRCNNGNGTFECGVCRCGPGWLGSQCE 472 (472)
T ss_dssp TTTTTTTEEEETTEEEECTTC------
T ss_pred cccCCCCeeEeCCceECcCCCCCCCCC
Confidence 4698 8999999999999999999996
No 125
>3t3p_B Integrin beta-3; integrin, cell adhesion, blood clotting, fibrinogen, platele; HET: NAG BMA MAN; 2.20A {Homo sapiens} PDB: 3t3m_B* 3nig_B* 3nif_B* 3nid_B* 2vdr_B* 2vc2_B* 2vdk_B* 2vdm_B* 2vdn_B* 2vdl_B* 2vdp_B* 2vdq_B* 2vdo_B* 3fcu_B* 1txv_B* 1ty3_B* 1ty5_B* 1ty6_B* 1ty7_B* 1tye_B*
Probab=83.84 E-value=0.45 Score=51.70 Aligned_cols=25 Identities=40% Similarity=1.019 Sum_probs=17.7
Q ss_pred CCC-CCCEEeCCCCceeeCCCCcCCCCC
Q 005688 126 DCS-GQGVCNHELGQCRCFHGFRGKGCS 152 (683)
Q Consensus 126 ~C~-~~G~C~~~~G~C~C~~G~~G~~Ce 152 (683)
.|+ ++|+.. .|.|.|.+||.|..||
T Consensus 447 ~C~~g~G~~~--CG~C~C~~G~~G~~Ce 472 (472)
T 3t3p_B 447 RCNNGNGTFE--CGVCRCGPGWLGSQCE 472 (472)
T ss_dssp TTTTTTEEEE--TTEEEECTTC------
T ss_pred ccCCCCeeEe--CCceECcCCCCCCCCC
Confidence 598 899998 9999999999999997
No 126
>2nzw_A Alpha1,3-fucosyltransferase; FUCT, GT 10; 1.90A {Helicobacter pylori} SCOP: c.87.1.11 PDB: 2nzx_A* 2nzy_A*
Probab=83.31 E-value=3.1 Score=43.84 Aligned_cols=72 Identities=15% Similarity=0.091 Sum_probs=49.2
Q ss_pred HHHHHHHHHhcCCCCCccccCcccCcceEEecCCchhHHHHhhcCceecccCCC----CCchhHHHHHhcCceeEEeeCC
Q 005688 594 GVRQKLAEEYGSSPNKEGKLGKQHAEDVIVTSLRSENYHEDLSSSVFCGVLPGD----GWSGRMEDSILQGCIPVVIQCK 669 (683)
Q Consensus 594 ~iR~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~y~~~m~~S~FCL~p~Gd----~~s~Rl~dAi~~GCIPViisD~ 669 (683)
..|..+++++...-. ....|++.... +.......+.|++=||-|+.--. =.|-+|++|+.+|+|||+++..
T Consensus 193 ~~R~~~~~~L~k~i~-Vd~~G~c~~~~----~~~~~~~~~~l~~YKFyLafENs~c~dYvTEK~~~al~~g~VPI~~G~~ 267 (371)
T 2nzw_A 193 PIRNAFYDALNSIEP-VTGGGSVRNTL----GYNVKNKNEFLSQYKFNLCFENTQGYGYVTEKIIDAYFSHTIPIYWGSP 267 (371)
T ss_dssp HHHHHHHHHHTTTSC-CEECSSTTCCS----SSCCSCHHHHHTTEEEEEEECSSCCTTCCCTHHHHHHHTTCEEEEESCT
T ss_pred HHHHHHHHHHhCcCC-EeeCCCccCCC----CCccccHHHHHhcCcEEEEEeccCCCCcccHHHHHHHhCCeEEEEECCC
Confidence 379999998876422 22333332110 11224577899999999976642 2388999999999999999975
Q ss_pred e
Q 005688 670 F 670 (683)
Q Consensus 670 ~ 670 (683)
-
T Consensus 268 ~ 268 (371)
T 2nzw_A 268 S 268 (371)
T ss_dssp T
T ss_pred c
Confidence 3
No 127
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=83.14 E-value=0.53 Score=50.50 Aligned_cols=34 Identities=35% Similarity=0.928 Sum_probs=28.4
Q ss_pred CCC-CCCCCCCCEEeCCCC--ceeeCC-CCcCCCCCcc
Q 005688 121 KSC-KSDCSGQGVCNHELG--QCRCFH-GFRGKGCSER 154 (683)
Q Consensus 121 ~~C-~~~C~~~G~C~~~~G--~C~C~~-G~~G~~Ce~~ 154 (683)
..| +++|.++|+|....+ .|.|+. ||+|+.|+..
T Consensus 186 ~~C~~~pC~n~g~C~~~~~~~~C~C~~~~~~G~~C~~~ 223 (410)
T 3asi_A 186 TTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDP 223 (410)
T ss_dssp SCCCTTSSSTTCEEEECSSSEEEECTTTSEESTTSCEE
T ss_pred CCcccccCCCCCEecCCCCCceEeccCCcccCCCCCCC
Confidence 578 788999999985433 899996 9999999974
No 128
>3g5c_A ADAM 22; alpha/beta fold, cross-linked domain, cell adhesion, cleavag of basic residues, EGF-like domain, glycoprotein, membrane, phosphoprotein; HET: NAG; 2.36A {Homo sapiens}
Probab=82.81 E-value=0.6 Score=51.55 Aligned_cols=60 Identities=22% Similarity=0.393 Sum_probs=38.3
Q ss_pred cccccccccccccccCCCCCCCCCccccCCCCcCCCCCCCceec-CCeeecCCCcccCCCCCCcc
Q 005688 248 EAYALKVQFKEECDCKYDGLLGQFCEVPVSSTCVNQCSGHGHCR-GGFCQCDSGWYGVDCSIPSV 311 (683)
Q Consensus 248 ~~~~~g~c~~g~C~C~~~G~~G~~C~~~~~~~C~~~C~~~G~C~-~g~C~C~~G~~G~~C~~~~~ 311 (683)
.|..+.+|++.+|+=. .-+.-..|... .....|+++|.|. .+.|+|.+||..++|+.+..
T Consensus 424 ~CG~~~vC~n~~C~~~-~~~~~~~C~~~---~~~~~C~~~GVCNn~~~CHC~~GwaPP~C~~~~~ 484 (510)
T 3g5c_A 424 PCGPQMMCLEHRCLPV-ASFNFSTCLSS---KEGTICSGNGVCSNELKCVCNRHWIGSDCNTYFP 484 (510)
T ss_dssp EEETTEEESSSCEEEG-GGGCCCCCCCS---STTCSGGGTEEEBTTSCEEECTTEESTTSCEECC
T ss_pred ccCCCCeEeCCccccc-ccccccCCCCc---ccccccCCCCeeCCCCCcCCCCCCCCCCCCCCCC
Confidence 3444556677776532 21111134311 1124699999998 66899999999999998653
No 129
>3g5c_A ADAM 22; alpha/beta fold, cross-linked domain, cell adhesion, cleavag of basic residues, EGF-like domain, glycoprotein, membrane, phosphoprotein; HET: NAG; 2.36A {Homo sapiens}
Probab=80.93 E-value=0.66 Score=51.24 Aligned_cols=33 Identities=33% Similarity=0.840 Sum_probs=28.5
Q ss_pred CCCC-----CCCCCCCEEeCCCCceeeCCCCcCCCCCcc
Q 005688 121 KSCK-----SDCSGQGVCNHELGQCRCFHGFRGKGCSER 154 (683)
Q Consensus 121 ~~C~-----~~C~~~G~C~~~~G~C~C~~G~~G~~Ce~~ 154 (683)
.+|+ ..|++||+|++ .+.|+|.+||..++|+..
T Consensus 445 ~~C~~~~~~~~C~~~GVCNn-~~~CHC~~GwaPP~C~~~ 482 (510)
T 3g5c_A 445 STCLSSKEGTICSGNGVCSN-ELKCVCNRHWIGSDCNTY 482 (510)
T ss_dssp CCCCCSSTTCSGGGTEEEBT-TSCEEECTTEESTTSCEE
T ss_pred cCCCCcccccccCCCCeeCC-CCCcCCCCCCCCCCCCCC
Confidence 4784 36999999995 779999999999999985
No 130
>3v4v_B Integrin beta-7; cell adhesion, madcam-1, membrane; HET: NAG BMA MAN 0DU; 3.10A {Homo sapiens} PDB: 3v4p_B*
Probab=75.98 E-value=0.54 Score=51.29 Aligned_cols=26 Identities=42% Similarity=0.874 Sum_probs=0.0
Q ss_pred CCC-CCCEEeCCCCceeeCCCCcCCCCCc
Q 005688 126 DCS-GQGVCNHELGQCRCFHGFRGKGCSE 153 (683)
Q Consensus 126 ~C~-~~G~C~~~~G~C~C~~G~~G~~Ce~ 153 (683)
.|+ ++|+.. .|.|.|.+||.|..||-
T Consensus 468 ~C~~g~G~~~--CG~C~C~~G~~G~~CeC 494 (503)
T 3v4v_B 468 HCSDGQGHLQ--CGVCSCAPGRLGRLCES 494 (503)
T ss_dssp -----------------------------
T ss_pred ccCCCCeeEe--CCceECcCCCcCCCCCC
Confidence 486 788877 89999999999999983
No 131
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=74.40 E-value=2.2 Score=35.95 Aligned_cols=41 Identities=24% Similarity=0.667 Sum_probs=28.1
Q ss_pred CCC-CCCCCCCCEEeC-CCC--ceeeCCCCcCC--CCCccccCCCCC
Q 005688 121 KSC-KSDCSGQGVCNH-ELG--QCRCFHGFRGK--GCSERIHFQCNF 161 (683)
Q Consensus 121 ~~C-~~~C~~~G~C~~-~~G--~C~C~~G~~G~--~Ce~~~~~~C~~ 161 (683)
..| .+.|+.+..|-. ..| +|+|.+||.|+ .|.+....+|..
T Consensus 5 h~C~~~~C~~NA~C~r~~~g~e~C~C~~gy~gdg~~Cv~~~~~sC~~ 51 (99)
T 1ob1_C 5 HQCVKKQCPQNSGCFRHLDEREECKCLLNYKQEGDKCVENPNPTCNE 51 (99)
T ss_dssp TCCCSCCCCTTEEEECCTTSCCEEEECTTEEEETTEEEECSCCCSTT
T ss_pred eEeccCCCCCCCCeEEcCCCCEEEEecCCeecCCCeEeeCCCCChhh
Confidence 456 567889999965 345 89999999864 355432245654
No 132
>3v4v_B Integrin beta-7; cell adhesion, madcam-1, membrane; HET: NAG BMA MAN 0DU; 3.10A {Homo sapiens} PDB: 3v4p_B*
Probab=73.74 E-value=0.74 Score=50.27 Aligned_cols=28 Identities=39% Similarity=0.916 Sum_probs=0.0
Q ss_pred CCCC-CCceecCCeeecCCCcccCCCCCC
Q 005688 282 NQCS-GHGHCRGGFCQCDSGWYGVDCSIP 309 (683)
Q Consensus 282 ~~C~-~~G~C~~g~C~C~~G~~G~~C~~~ 309 (683)
..|+ ++|+..-|.|.|.+||.|..|+-.
T Consensus 467 ~~C~~g~G~~~CG~C~C~~G~~G~~CeC~ 495 (503)
T 3v4v_B 467 PHCSDGQGHLQCGVCSCAPGRLGRLCESR 495 (503)
T ss_dssp -----------------------------
T ss_pred cccCCCCeeEeCCceECcCCCcCCCCCCC
Confidence 3687 899999999999999999999854
No 133
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=72.06 E-value=0.99 Score=45.70 Aligned_cols=33 Identities=27% Similarity=0.848 Sum_probs=25.8
Q ss_pred CCC---CCCCCCCCEEeCCCC--ceeeCCCCc--CCCCCc
Q 005688 121 KSC---KSDCSGQGVCNHELG--QCRCFHGFR--GKGCSE 153 (683)
Q Consensus 121 ~~C---~~~C~~~G~C~~~~G--~C~C~~G~~--G~~Ce~ 153 (683)
++| ..+|+.++.|.+..| .|.|++||. |..|..
T Consensus 6 DEC~~~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~GnG~~C~d 45 (285)
T 1gl4_A 6 QTCANNRHQCSVHAECRDYATGFCCRCVANYTGNGRQCVA 45 (285)
T ss_dssp -CHHHHGGGSCTTEEEEECSSCEEEEECTTEEECSSSEEE
T ss_pred hhccCCCCCCCCCCEeEcCCCCeEEEcCCCCCCCCCcCCC
Confidence 778 467999999988777 899999998 445543
No 134
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=71.73 E-value=3.5 Score=45.87 Aligned_cols=45 Identities=20% Similarity=0.629 Sum_probs=29.9
Q ss_pred ccccccCCCCCC--CCCccccCCCCcCC----CCCCCceec------------CCeeecCCCcccCCCC
Q 005688 257 KEECDCKYDGLL--GQFCEVPVSSTCVN----QCSGHGHCR------------GGFCQCDSGWYGVDCS 307 (683)
Q Consensus 257 ~g~C~C~~~G~~--G~~C~~~~~~~C~~----~C~~~G~C~------------~g~C~C~~G~~G~~C~ 307 (683)
.|+|.|. +||. |..|+ .|+. ...+.+.|. ...|.|..||.-..-+
T Consensus 262 ~G~C~C~-~G~e~~~~~C~-----aC~~g~~k~~~~~~~C~~CP~~S~s~~~Gs~~C~C~ng~~ra~~d 324 (536)
T 3fl7_A 262 IGQCLCQ-AGYEKVEDACQ-----ACSPGFFKFEASESPCLECPEHTLPSPEGATSCECEEGFFRAPQD 324 (536)
T ss_dssp BCCCEEC-TTEEEETTEEE-----ECCTTEECCSCCSSCCEECCSSEECCCTTCSSCEECTTCBCCTTC
T ss_pred cCcEecc-CccccCCceee-----ecCCCCCcccCCCCccccCCCCCCCCCCCccEEEEeccccccCCC
Confidence 6899999 9997 44554 3542 344455553 2389999999755443
No 135
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=69.11 E-value=2.2 Score=52.52 Aligned_cols=34 Identities=35% Similarity=0.938 Sum_probs=28.3
Q ss_pred CCC-CCCCCCCCEEeCCCC--ceeeC-CCCcCCCCCcc
Q 005688 121 KSC-KSDCSGQGVCNHELG--QCRCF-HGFRGKGCSER 154 (683)
Q Consensus 121 ~~C-~~~C~~~G~C~~~~G--~C~C~-~G~~G~~Ce~~ 154 (683)
+.| +++|.|+|+|...-. .|.|+ +||+|+.|+..
T Consensus 1018 ~~C~~~pC~ngG~C~~~~~~~~C~C~~~g~~G~~C~~~ 1055 (1245)
T 3qcw_A 1018 TTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDP 1055 (1245)
T ss_dssp CCCCTTSSSSSCEEEEETTEEEEECTTSSCBSTTSCBC
T ss_pred CceECCcCCCCCEeCCCCCCCEEECCCCCCCCCCccCC
Confidence 578 788999999975333 89999 69999999874
No 136
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=69.01 E-value=4.1 Score=34.27 Aligned_cols=66 Identities=23% Similarity=0.476 Sum_probs=42.7
Q ss_pred CCCCCCccccCCcccccccccccccccccCCCCCCC--CCccccCCCCcCC---CCCCCceec---C----C--eeecCC
Q 005688 234 TNGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLLG--QFCEVPVSSTCVN---QCSGHGHCR---G----G--FCQCDS 299 (683)
Q Consensus 234 ~~C~~~G~C~~~~~~~~~~g~c~~g~C~C~~~G~~G--~~C~~~~~~~C~~---~C~~~G~C~---~----g--~C~C~~ 299 (683)
..|..++.|-.... -..+|.|. +||.| ..|.......|.. .|.-+.+|. . + .|.|.+
T Consensus 10 ~~C~~NA~C~r~~~--------g~e~C~C~-~gy~gdg~~Cv~~~~~sC~~nNGGCd~nA~C~~~~~~~~~~ki~C~C~~ 80 (99)
T 1ob1_C 10 KQCPQNSGCFRHLD--------EREECKCL-LNYKQEGDKCVENPNPTCNENNGGCDADAKCTEEDSGSNGKKITCECTK 80 (99)
T ss_dssp CCCCTTEEEECCTT--------SCCEEEEC-TTEEEETTEEEECSCCCSTTGGGGCCTTEEEECCSCSSSSCCCEEEECS
T ss_pred CCCCCCCCeEEcCC--------CCEEEEec-CCeecCCCeEeeCCCCChhhcCCCcCCCceeEecCCcccCCceEeEeCC
Confidence 45667777744211 14589998 99985 4565543356753 488888885 2 2 799999
Q ss_pred Cc-----ccCCCCC
Q 005688 300 GW-----YGVDCSI 308 (683)
Q Consensus 300 G~-----~G~~C~~ 308 (683)
|| .|..|+.
T Consensus 81 g~~~~~~~gvf~~~ 94 (99)
T 1ob1_C 81 PDSYPLFDGIFCSH 94 (99)
T ss_dssp TTCCEEGGGTEECC
T ss_pred CCcccceeEEEecc
Confidence 95 4666653
No 137
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=65.54 E-value=3.3 Score=44.21 Aligned_cols=31 Identities=39% Similarity=0.911 Sum_probs=25.7
Q ss_pred CcC-CCCCCCceec----CCeeecCC-CcccCCCCCC
Q 005688 279 TCV-NQCSGHGHCR----GGFCQCDS-GWYGVDCSIP 309 (683)
Q Consensus 279 ~C~-~~C~~~G~C~----~g~C~C~~-G~~G~~C~~~ 309 (683)
.|. ++|.++|+|. ...|.|.. ||+|..|+.+
T Consensus 187 ~C~~~pC~n~g~C~~~~~~~~C~C~~~~~~G~~C~~~ 223 (410)
T 3asi_A 187 TCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDP 223 (410)
T ss_dssp CCCTTSSSTTCEEEECSSSEEEECTTTSEESTTSCEE
T ss_pred CcccccCCCCCEecCCCCCceEeccCCcccCCCCCCC
Confidence 454 6899999997 45899996 9999999874
No 138
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=65.52 E-value=2 Score=47.78 Aligned_cols=63 Identities=25% Similarity=0.494 Sum_probs=36.8
Q ss_pred CCCCCCEEeCCCCceeeCCCCc--CCCCCccccCCCCCCCCCC-CCCCCcccccCCCcccCC---CceEeeCCCcc
Q 005688 126 DCSGQGVCNHELGQCRCFHGFR--GKGCSERIHFQCNFPKTPE-LPYGRWVVSICPTHCDTT---RAMCFCGEGTK 195 (683)
Q Consensus 126 ~C~~~G~C~~~~G~C~C~~G~~--G~~Ce~~~~~~C~~~~~~~-~~~g~~~~~~C~~~C~~~---~g~C~C~~G~~ 195 (683)
.|+..|.+..-.|+|.|.+||. |..|+. |..+.... .-.+.| ..|+.+.... ...|.|..||.
T Consensus 251 ~C~~dG~w~~p~G~C~C~~G~e~~~~~C~a-----C~~g~~k~~~~~~~C--~~CP~~S~s~~~Gs~~C~C~ng~~ 319 (536)
T 3fl7_A 251 HCAVDGEWLVPIGQCLCQAGYEKVEDACQA-----CSPGFFKFEASESPC--LECPEHTLPSPEGATSCECEEGFF 319 (536)
T ss_dssp EECTTSCBCCCBCCCEECTTEEEETTEEEE-----CCTTEECCSCCSSCC--EECCSSEECCCTTCSSCEECTTCB
T ss_pred EEcCCCCEecccCcEeccCccccCCceeee-----cCCCCCcccCCCCcc--ccCCCCCCCCCCCccEEEEecccc
Confidence 4999999977789999999998 444543 55431110 001111 2355443322 23788887775
No 139
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=62.74 E-value=3.2 Score=51.12 Aligned_cols=34 Identities=29% Similarity=0.952 Sum_probs=28.4
Q ss_pred CCC-CCCCCCCCEEeCCCC--ceeeC-CCCcCCCCCcc
Q 005688 121 KSC-KSDCSGQGVCNHELG--QCRCF-HGFRGKGCSER 154 (683)
Q Consensus 121 ~~C-~~~C~~~G~C~~~~G--~C~C~-~G~~G~~Ce~~ 154 (683)
..| +++|.++|+|....+ .|.|+ +||.|..|+..
T Consensus 620 ~~C~~~pC~ngg~C~~~~~~~~C~C~~~g~~G~~C~~~ 657 (1245)
T 3qcw_A 620 KPCLSNPCKNNGMCRDGWNRYVCDCSGTGYLGRSCERE 657 (1245)
T ss_dssp CGGGSCCCCTTCEEEECSSSEEEECTTTTEESTTSCEE
T ss_pred CCCCccCCCCCCEEeCCCCCeEEECCCCCcccccCccc
Confidence 678 789999999975333 89999 79999999863
No 140
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=60.62 E-value=5.9 Score=36.77 Aligned_cols=48 Identities=10% Similarity=-0.036 Sum_probs=37.3
Q ss_pred chhHHHHhhcCceecccCC-CCCchhHHHHHhcCceeEEeeCCeeecccc
Q 005688 628 SENYHEDLSSSVFCGVLPG-DGWSGRMEDSILQGCIPVVIQCKFIFSTTL 676 (683)
Q Consensus 628 ~~~y~~~m~~S~FCL~p~G-d~~s~Rl~dAi~~GCIPViisD~~~l~~~~ 676 (683)
..++.+.|+.+.+.+.|.- .+++..++|||.+|+ |||.++.-.+..++
T Consensus 106 ~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~-PvI~~~~~~~~e~~ 154 (200)
T 2bfw_A 106 REFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGA-IPIASAVGGLRDII 154 (200)
T ss_dssp HHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTC-EEEEESCHHHHHHC
T ss_pred HHHHHHHHHHCCEEEECCCCCCccHHHHHHHHCCC-CEEEeCCCChHHHc
Confidence 3578899999999999875 466777999999997 78888755444443
No 141
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=60.62 E-value=5.6 Score=36.51 Aligned_cols=48 Identities=15% Similarity=0.054 Sum_probs=37.1
Q ss_pred chhHHHHhhcCceecccCC-CCCchhHHHHHhcCceeEEeeCCeeecccc
Q 005688 628 SENYHEDLSSSVFCGVLPG-DGWSGRMEDSILQGCIPVVIQCKFIFSTTL 676 (683)
Q Consensus 628 ~~~y~~~m~~S~FCL~p~G-d~~s~Rl~dAi~~GCIPViisD~~~l~~~~ 676 (683)
..++.+.|+.+.+.+.|.- .+++.-++|||.+|+ |||.+|.-.+..++
T Consensus 88 ~~e~~~~~~~adi~v~ps~~e~~~~~~~Eama~G~-PvI~~~~~~~~e~i 136 (177)
T 2f9f_A 88 EEELIDLYSRCKGLLCTAKDEDFGLTPIEAMASGK-PVIAVNEGGFKETV 136 (177)
T ss_dssp HHHHHHHHHHCSEEEECCSSCCSCHHHHHHHHTTC-CEEEESSHHHHHHC
T ss_pred HHHHHHHHHhCCEEEeCCCcCCCChHHHHHHHcCC-cEEEeCCCCHHHHh
Confidence 4567899999999998653 567777999999997 88888765444444
No 142
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=60.26 E-value=6.6 Score=33.27 Aligned_cols=64 Identities=28% Similarity=0.467 Sum_probs=41.1
Q ss_pred CCCCCccccCC-cccccccccccccccccCCCCCCC--CCccccCCCCcC---CCCCCCceec-CC----eeecCCCc--
Q 005688 235 NGSKPGWCNVD-PEEAYALKVQFKEECDCKYDGLLG--QFCEVPVSSTCV---NQCSGHGHCR-GG----FCQCDSGW-- 301 (683)
Q Consensus 235 ~C~~~G~C~~~-~~~~~~~g~c~~g~C~C~~~G~~G--~~C~~~~~~~C~---~~C~~~G~C~-~g----~C~C~~G~-- 301 (683)
.|..++.|... ++ ..+|.|. .||.| ..|... ...|. ..|.-+.+|. .+ .|.|..+|
T Consensus 17 ~Cp~NA~C~r~~~G---------~e~CrCl-~gY~~dg~~Cv~~-Np~C~~nNGGCd~nAeC~~~~~~ki~C~C~~~~~~ 85 (105)
T 1n1i_A 17 NVPENAACYRYLDG---------TEEWRCL-LGFKEVGGKCVPA-SITCEENNGGCAPEAECTMDDKKEVECKCTKEGSE 85 (105)
T ss_dssp CCCTTEEEEECTTS---------CEEEEEC-TTEEECSSSEEEC-CCCTTSGGGGSCTTSEEEECTTSCEEEECCSTTCC
T ss_pred CCCCCCCeEECCCC---------CEeEEEE-CCeeccCCEEEEC-CcchhhcCCCcCCCcEeEECCCCEEEeECCCCCCc
Confidence 45566777442 21 4589998 99985 567654 44464 2477778886 22 79998884
Q ss_pred ---ccCCCCCC
Q 005688 302 ---YGVDCSIP 309 (683)
Q Consensus 302 ---~G~~C~~~ 309 (683)
.|..|+..
T Consensus 86 ~~~~GvfC~~s 96 (105)
T 1n1i_A 86 PLFEGVFCSSS 96 (105)
T ss_dssp EEGGGTEECCC
T ss_pred cccceEEECCC
Confidence 56666553
No 143
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=59.57 E-value=3.9 Score=30.29 Aligned_cols=26 Identities=38% Similarity=1.049 Sum_probs=19.9
Q ss_pred CCCCCCEEeCCCC--ceeeCCCCc----CCCCCc
Q 005688 126 DCSGQGVCNHELG--QCRCFHGFR----GKGCSE 153 (683)
Q Consensus 126 ~C~~~G~C~~~~G--~C~C~~G~~----G~~Ce~ 153 (683)
.|+ ..|.+..| .|.|++||. |..|+.
T Consensus 10 ~C~--~~C~nt~Gsy~C~C~~Gy~L~~d~~~C~d 41 (55)
T 2jkh_L 10 DCD--QFCHEEQNSVVCSCARGYTLADNGKACIP 41 (55)
T ss_dssp GCS--SEEEEETTEEEEECCTTEEECTTSSCEEE
T ss_pred CcC--cEeEcCCCCeEEeCCCCCEECCCCCeecc
Confidence 465 37987777 799999996 667765
No 144
>1jlz_A Tityustoxin alpha-KTX; scorpion venom, K+-channel blocker, structure; NMR {Synthetic} SCOP: g.3.7.2
Probab=59.53 E-value=1.6 Score=27.24 Aligned_cols=21 Identities=38% Similarity=1.168 Sum_probs=15.9
Q ss_pred CcCCCCCCCceecCCeeecCC
Q 005688 279 TCVNQCSGHGHCRGGFCQCDS 299 (683)
Q Consensus 279 ~C~~~C~~~G~C~~g~C~C~~ 299 (683)
.|..+|..+|.|+++.|.|.+
T Consensus 4 ~C~~~C~~~gKCmNgkC~Cy~ 24 (26)
T 1jlz_A 4 SCRKKCKGSGKCINGRCKCYX 24 (26)
T ss_dssp SHHHHTTSSEEEETTEEEEC-
T ss_pred hhhhhhCCCCEEeCCCceeec
Confidence 344567788999999999965
No 145
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=58.18 E-value=5 Score=29.10 Aligned_cols=23 Identities=26% Similarity=0.842 Sum_probs=18.0
Q ss_pred CCCCCCCEEeCCCC--ceeeCCCCcCC
Q 005688 125 SDCSGQGVCNHELG--QCRCFHGFRGK 149 (683)
Q Consensus 125 ~~C~~~G~C~~~~G--~C~C~~G~~G~ 149 (683)
..|. ++|.+..| .|.|++||.+.
T Consensus 20 ~~C~--~~C~n~~Gsy~C~C~~Gy~~~ 44 (53)
T 1apq_A 20 PQCQ--HLCHNYVGGYFCSCRPGYELQ 44 (53)
T ss_dssp CTTS--SEEEEETTEEEEECSTTCEEC
T ss_pred CCCC--CEeECCCCCeEEECCCCCeEC
Confidence 3575 48987777 89999999864
No 146
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=56.13 E-value=9.3 Score=32.36 Aligned_cols=33 Identities=24% Similarity=0.682 Sum_probs=25.0
Q ss_pred CCC-CCCCCCCCEEeC-CCC--ceeeCCCCcCC--CCCc
Q 005688 121 KSC-KSDCSGQGVCNH-ELG--QCRCFHGFRGK--GCSE 153 (683)
Q Consensus 121 ~~C-~~~C~~~G~C~~-~~G--~C~C~~G~~G~--~Ce~ 153 (683)
..| ...|.-|..|.. ..| +|+|..||.|+ .|-+
T Consensus 11 h~C~~t~Cp~NA~C~r~~~G~e~CrCl~gY~~dg~~Cv~ 49 (105)
T 1n1i_A 11 HKCIDTNVPENAACYRYLDGTEEWRCLLGFKEVGGKCVP 49 (105)
T ss_dssp TSCCSSCCCTTEEEEECTTSCEEEEECTTEEECSSSEEE
T ss_pred cEecCCCCCCCCCeEECCCCCEeEEEECCeeccCCEEEE
Confidence 567 557889999965 556 89999999864 4654
No 147
>1cmr_A Charybdotoxin, alpha chimera; antagonist of nicotinic acetylcholine receptor, curaremimetic protein; NMR {Synthetic} SCOP: g.3.7.2
Probab=52.50 E-value=7.8 Score=25.32 Aligned_cols=15 Identities=33% Similarity=0.842 Sum_probs=12.0
Q ss_pred CCCceecCCeeecCC
Q 005688 285 SGHGHCRGGFCQCDS 299 (683)
Q Consensus 285 ~~~G~C~~g~C~C~~ 299 (683)
..+|.|+++.|.|.+
T Consensus 17 ~~~gKC~NgkC~Cy~ 31 (31)
T 1cmr_A 17 TSKGWCDHRGCICES 31 (31)
T ss_dssp CCCCCEETTEECCCC
T ss_pred CCCCceeCCCceeCC
Confidence 457889999999953
No 148
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=51.06 E-value=5.8 Score=31.18 Aligned_cols=28 Identities=21% Similarity=0.523 Sum_probs=19.8
Q ss_pred CCC---CCCCCCCCEEeCCCC--cee-eCCCCcC
Q 005688 121 KSC---KSDCSGQGVCNHELG--QCR-CFHGFRG 148 (683)
Q Consensus 121 ~~C---~~~C~~~G~C~~~~G--~C~-C~~G~~G 148 (683)
++| +..|.++++|.+..| .|. |..||.+
T Consensus 4 dEC~~~~~~C~~~~~C~Nt~Gsy~C~~~~~g~~~ 37 (71)
T 2kl7_A 4 NECLTIPEACKGEMKCINHYGGYLCLPRSAAVIN 37 (71)
T ss_dssp CCTTCCCCSCTTEEEEEETTCCEEEEETTSCCCS
T ss_pred ccccCCCCCCCCCCEeECCCCCeEecccCCcccc
Confidence 667 246988899987777 676 3457764
No 149
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=49.91 E-value=12 Score=38.48 Aligned_cols=50 Identities=14% Similarity=0.157 Sum_probs=38.9
Q ss_pred chhHHHHhhcCceecccCC--------CCCchhHHHHHhcCceeEEeeCCeeecccccC
Q 005688 628 SENYHEDLSSSVFCGVLPG--------DGWSGRMEDSILQGCIPVVIQCKFIFSTTLCP 678 (683)
Q Consensus 628 ~~~y~~~m~~S~FCL~p~G--------d~~s~Rl~dAi~~GCIPViisD~~~l~~~~~~ 678 (683)
..++.+.|+.+.+.+.|.- .+++..++|||.+| +|||.+|.-.+.+++..
T Consensus 263 ~~~~~~~~~~ad~~v~ps~~~~~~~~~e~~~~~~~Ea~a~G-~PvI~~~~~~~~e~i~~ 320 (394)
T 3okp_A 263 YQDMINTLAAADIFAMPARTRGGGLDVEGLGIVYLEAQACG-VPVIAGTSGGAPETVTP 320 (394)
T ss_dssp HHHHHHHHHHCSEEEECCCCBGGGTBCCSSCHHHHHHHHTT-CCEEECSSTTGGGGCCT
T ss_pred HHHHHHHHHhCCEEEecCccccccccccccCcHHHHHHHcC-CCEEEeCCCChHHHHhc
Confidence 3778899999999998765 35567799999999 69999886655555543
No 150
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=46.83 E-value=11 Score=39.18 Aligned_cols=48 Identities=15% Similarity=0.147 Sum_probs=38.1
Q ss_pred chhHHHHhhcCceecccC--CCCCchhHHHHHhcCceeEEeeCCeeecccc
Q 005688 628 SENYHEDLSSSVFCGVLP--GDGWSGRMEDSILQGCIPVVIQCKFIFSTTL 676 (683)
Q Consensus 628 ~~~y~~~m~~S~FCL~p~--Gd~~s~Rl~dAi~~GCIPViisD~~~l~~~~ 676 (683)
..++.+.|+.|.+.+.|. ..+++..++|||.+|+ |||.+|.-.+..++
T Consensus 273 ~~~~~~~~~~adv~v~ps~~~e~~~~~~~Ea~a~G~-PvI~~~~~~~~e~i 322 (406)
T 2gek_A 273 DATKASAMRSADVYCAPHLGGESFGIVLVEAMAAGT-AVVASDLDAFRRVL 322 (406)
T ss_dssp HHHHHHHHHHSSEEEECCCSCCSSCHHHHHHHHHTC-EEEECCCHHHHHHH
T ss_pred HHHHHHHHHHCCEEEecCCCCCCCchHHHHHHHcCC-CEEEecCCcHHHHh
Confidence 356789999999999994 5677888999999996 88888865444443
No 151
>1pvz_A K+ toxin-like peptide; alpha/beta scaffold; NMR {Mesobuthus martensii} SCOP: g.3.7.2
Probab=41.19 E-value=3.8 Score=26.77 Aligned_cols=19 Identities=47% Similarity=1.441 Sum_probs=15.4
Q ss_pred CcCCCCCCCceecCCeeec
Q 005688 279 TCVNQCSGHGHCRGGFCQC 297 (683)
Q Consensus 279 ~C~~~C~~~G~C~~g~C~C 297 (683)
.|..+|..+|.|++++|.|
T Consensus 12 ~C~~~C~~~gKC~NgkC~C 30 (31)
T 1pvz_A 12 DCSRKCPGNPPCRNGFCAC 30 (31)
T ss_dssp HHHHHSSSCCCEETTEESC
T ss_pred HHHhhhccCCcccCCCcee
Confidence 3555678889999999998
No 152
>1bah_A Charybdotoxin, chabii; neurotoxin, potassium channel inhibitor; HET: PCA ABA; NMR {Leiurus quinquestriatus} SCOP: g.3.7.2 PDB: 2a9h_E* 2crd_A* 1lir_A*
Probab=40.18 E-value=14 Score=25.15 Aligned_cols=21 Identities=24% Similarity=0.567 Sum_probs=14.9
Q ss_pred CcCCCC-----CCCceecCCeeecCC
Q 005688 279 TCVNQC-----SGHGHCRGGFCQCDS 299 (683)
Q Consensus 279 ~C~~~C-----~~~G~C~~g~C~C~~ 299 (683)
.|..+| ..+|.|++|.|.|.+
T Consensus 12 ~C~~~Ck~~~g~~~gKCmNgkC~Cyp 37 (37)
T 1bah_A 12 EXWSVCQRLHNTSRGKCMNKKXRCYS 37 (37)
T ss_dssp TTTTHHHHHTSCSCCCBCSSSBCCCC
T ss_pred HHHHHHHHHhCCCCcceeCCCCCcCC
Confidence 355555 467889999999853
No 153
>2ktc_A Potassium channel toxin alpha-KTX 9.4; BTK-2, scorpion toxin, KV1.1, disulfide bond, ionic channel inhibitor, neurotoxin; NMR {Mesobuthus tamulus}
Probab=38.64 E-value=7.8 Score=25.18 Aligned_cols=24 Identities=29% Similarity=0.814 Sum_probs=18.1
Q ss_pred CCCCCCCCC---CCEEeCCCCceeeCCCC
Q 005688 121 KSCKSDCSG---QGVCNHELGQCRCFHGF 146 (683)
Q Consensus 121 ~~C~~~C~~---~G~C~~~~G~C~C~~G~ 146 (683)
.+||..|.+ ..+|. ++.|.|.+|-
T Consensus 6 EeCP~HCk~k~A~~tCd--n~~C~Cn~~~ 32 (34)
T 2ktc_A 6 AECPMHCKGKMAKPTCE--NEVCKCNIGK 32 (34)
T ss_dssp HHHHHTCCTTCCCEEEE--TTEEEECTTC
T ss_pred ccChhhhcccccccccc--CCeEecccCC
Confidence 356777865 35898 8999999884
No 154
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=38.59 E-value=20 Score=37.72 Aligned_cols=47 Identities=9% Similarity=0.015 Sum_probs=37.1
Q ss_pred hhHHHHhhcCceecccCC-CCCchhHHHHHhcCceeEEeeCCeeecccc
Q 005688 629 ENYHEDLSSSVFCGVLPG-DGWSGRMEDSILQGCIPVVIQCKFIFSTTL 676 (683)
Q Consensus 629 ~~y~~~m~~S~FCL~p~G-d~~s~Rl~dAi~~GCIPViisD~~~l~~~~ 676 (683)
.++.+.|+.+.+.+.|.- .+++..++|||.+|+ |||.+|.-.+..++
T Consensus 317 ~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~-PvI~~~~~~~~e~i 364 (438)
T 3c48_A 317 SELVAVYRAADIVAVPSFNESFGLVAMEAQASGT-PVIAARVGGLPIAV 364 (438)
T ss_dssp HHHHHHHHHCSEEEECCSCCSSCHHHHHHHHTTC-CEEEESCTTHHHHS
T ss_pred HHHHHHHHhCCEEEECccccCCchHHHHHHHcCC-CEEecCCCChhHHh
Confidence 678899999999998875 366777999999998 89988854444443
No 155
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=38.47 E-value=21 Score=36.93 Aligned_cols=48 Identities=15% Similarity=0.136 Sum_probs=36.9
Q ss_pred chhHHHHhhcCceecccCC-CCCchhHHHHHhcCceeEEeeCCeeecccc
Q 005688 628 SENYHEDLSSSVFCGVLPG-DGWSGRMEDSILQGCIPVVIQCKFIFSTTL 676 (683)
Q Consensus 628 ~~~y~~~m~~S~FCL~p~G-d~~s~Rl~dAi~~GCIPViisD~~~l~~~~ 676 (683)
..+..+.|+.+.+.+.|.- .+++.-++|||.+| +|||.+|.-.+.+++
T Consensus 275 ~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G-~PvI~~~~~~~~e~v 323 (394)
T 2jjm_A 275 QDNVAELLAMSDLMLLLSEKESFGLVLLEAMACG-VPCIGTRVGGIPEVI 323 (394)
T ss_dssp CSCTHHHHHTCSEEEECCSCCSCCHHHHHHHHTT-CCEEEECCTTSTTTC
T ss_pred hhhHHHHHHhCCEEEeccccCCCchHHHHHHhcC-CCEEEecCCChHHHh
Confidence 3567799999999998865 46677799999999 788888754444444
No 156
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=34.24 E-value=23 Score=36.91 Aligned_cols=49 Identities=10% Similarity=0.047 Sum_probs=38.2
Q ss_pred chhHHHHhhcCceecccCC-CCCchhHHHHHhcCceeEEeeCCeeeccccc
Q 005688 628 SENYHEDLSSSVFCGVLPG-DGWSGRMEDSILQGCIPVVIQCKFIFSTTLC 677 (683)
Q Consensus 628 ~~~y~~~m~~S~FCL~p~G-d~~s~Rl~dAi~~GCIPViisD~~~l~~~~~ 677 (683)
..+..+.|+.|.+.+.|.- .+++.-+.|||.+|+ |||.+|.-.+..++.
T Consensus 264 ~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~-PvI~s~~~g~~e~v~ 313 (413)
T 3oy2_A 264 DERVDMMYNACDVIVNCSSGEGFGLCSAEGAVLGK-PLIISAVGGADDYFS 313 (413)
T ss_dssp HHHHHHHHHHCSEEEECCSCCSSCHHHHHHHTTTC-CEEEECCHHHHHHSC
T ss_pred HHHHHHHHHhCCEEEeCCCcCCCCcHHHHHHHcCC-CEEEcCCCChHHHHc
Confidence 4578899999999998765 467777999999995 999998655544443
No 157
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=33.55 E-value=11 Score=27.41 Aligned_cols=23 Identities=35% Similarity=0.960 Sum_probs=16.7
Q ss_pred EEeCCCC--ceeeCCCCc----CCCCCcc
Q 005688 132 VCNHELG--QCRCFHGFR----GKGCSER 154 (683)
Q Consensus 132 ~C~~~~G--~C~C~~G~~----G~~Ce~~ 154 (683)
.|.+..| .|.|++||. |..|+..
T Consensus 11 ~C~n~~gs~~C~C~~Gy~L~~d~~tC~di 39 (51)
T 1kig_L 11 FCREERSEVRCSCAHGYVLGDDSKSCVST 39 (51)
T ss_dssp CCCEETTEECCCCCTTEEECTTSSCEEEC
T ss_pred EeEcCCCCeEEeCCCCcEECCCCCccccC
Confidence 4655455 799999996 6778753
No 158
>2lix_A IMKTX104, potassium channel toxins; disulfide bond stabilized structure; NMR {Lychas mucronatus}
Probab=38.61 E-value=9.5 Score=22.92 Aligned_cols=11 Identities=45% Similarity=1.256 Sum_probs=7.7
Q ss_pred CceecCCeeec
Q 005688 287 HGHCRGGFCQC 297 (683)
Q Consensus 287 ~G~C~~g~C~C 297 (683)
-|+|++|.|.|
T Consensus 16 igtcvdgkckc 26 (27)
T 2lix_A 16 IGTCVDGKCKC 26 (27)
Confidence 36777777776
No 159
>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens}
Probab=32.05 E-value=35 Score=38.69 Aligned_cols=33 Identities=30% Similarity=0.815 Sum_probs=25.5
Q ss_pred CcCCCCCCCceecCCeeecCCCcccCCCCCCccC
Q 005688 279 TCVNQCSGHGHCRGGFCQCDSGWYGVDCSIPSVM 312 (683)
Q Consensus 279 ~C~~~C~~~G~C~~g~C~C~~G~~G~~C~~~~~~ 312 (683)
.|...|...+.|..+.+-|..++ |..|..+...
T Consensus 123 ~c~~~c~~d~~c~g~~~Cc~n~c-G~~C~~P~~~ 155 (680)
T 1zlg_A 123 ACVESCEVDNECSGVKKCCSNGC-GHTCQVPKTL 155 (680)
T ss_pred hhhhhccccccCCCccccccccc-ccccccccee
Confidence 46777888888887665588887 8899987654
No 160
>1wz5_A Potassium channel blocking toxin 1; ionic channel inhibitor; HET: ABA; NMR {Pandinus imperator}
Probab=31.88 E-value=12 Score=25.08 Aligned_cols=23 Identities=22% Similarity=0.758 Sum_probs=16.9
Q ss_pred CCCCCCC-----CCCCEEeCCCCceeeCCC
Q 005688 121 KSCKSDC-----SGQGVCNHELGQCRCFHG 145 (683)
Q Consensus 121 ~~C~~~C-----~~~G~C~~~~G~C~C~~G 145 (683)
.+|-.+| ..+|.|. +|.|.|.++
T Consensus 8 ~~C~~~Ck~~~g~~~gKCm--NgkC~Cy~~ 35 (35)
T 1wz5_A 8 SDCGRPCQQQTGXPNSKCI--NRMCKCYGX 35 (35)
T ss_dssp TTTHHHHHHHSCSSCCEEE--TTEEECSCC
T ss_pred hHHHHHHHHHHCCCCccee--CCcceecCC
Confidence 5565555 5688999 899999653
No 161
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=31.08 E-value=28 Score=35.10 Aligned_cols=49 Identities=14% Similarity=0.089 Sum_probs=37.5
Q ss_pred chhHHHHhhcCceecccCC-----------CCCchhHHHHHhcCceeEEeeCCeeeccccc
Q 005688 628 SENYHEDLSSSVFCGVLPG-----------DGWSGRMEDSILQGCIPVVIQCKFIFSTTLC 677 (683)
Q Consensus 628 ~~~y~~~m~~S~FCL~p~G-----------d~~s~Rl~dAi~~GCIPViisD~~~l~~~~~ 677 (683)
..+..+.|+.+.+.+.|.- .+++.-++|||.+|+ |||.+|.-.+..++.
T Consensus 222 ~~~l~~~~~~adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~-PvI~s~~~~~~e~~~ 281 (342)
T 2iuy_A 222 GERRLDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGT-PVVGTGNGCLAEIVP 281 (342)
T ss_dssp HHHHHHHHHHCSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHTTC-CEEECCTTTHHHHGG
T ss_pred HHHHHHHHHhCCEEEECCcccccccccccccCccHHHHHHHhcCC-CEEEcCCCChHHHhc
Confidence 3566899999999988864 466777999999995 999988655544443
No 162
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=30.96 E-value=30 Score=35.98 Aligned_cols=49 Identities=10% Similarity=-0.045 Sum_probs=38.1
Q ss_pred CchhHHHHhhcCceecccCC-CCCchhHHHHHhcCceeEEeeCCeeecccc
Q 005688 627 RSENYHEDLSSSVFCGVLPG-DGWSGRMEDSILQGCIPVVIQCKFIFSTTL 676 (683)
Q Consensus 627 ~~~~y~~~m~~S~FCL~p~G-d~~s~Rl~dAi~~GCIPViisD~~~l~~~~ 676 (683)
...+..+.|+.|...+.|.- .+++.-++|||.+| +|||.+|.-.+.+++
T Consensus 320 ~~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G-~Pvi~s~~~~~~e~~ 369 (439)
T 3fro_A 320 SREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLG-AIPIASAVGGLRDII 369 (439)
T ss_dssp CHHHHHHHHTTCSEEEECBSCCSSCHHHHHHHHTT-CEEEEESSTHHHHHC
T ss_pred CHHHHHHHHHHCCEEEeCCCCCCccHHHHHHHHCC-CCeEEcCCCCcceeE
Confidence 45668899999999998865 36677799999999 688888765554444
No 163
>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens}
Probab=29.21 E-value=40 Score=38.18 Aligned_cols=25 Identities=12% Similarity=0.092 Sum_probs=18.5
Q ss_pred CCCCCCCEEeCCCCceeeCCCCcCCCC
Q 005688 125 SDCSGQGVCNHELGQCRCFHGFRGKGC 151 (683)
Q Consensus 125 ~~C~~~G~C~~~~G~C~C~~G~~G~~C 151 (683)
..|.+++.|. ...|.|..+|.++.+
T Consensus 52 ~~c~~~~~~~--~c~~~C~~~~~~~~~ 76 (680)
T 1zlg_A 52 VWCQNHKQCS--KCLEPCKESGDLRKH 76 (680)
T ss_pred ecCCCccccc--cccCcccccccCchh
Confidence 3588899887 356678888877665
No 164
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=28.60 E-value=21 Score=32.66 Aligned_cols=24 Identities=38% Similarity=1.034 Sum_probs=18.2
Q ss_pred CCCCCEEeCCCC--ceeeCCCCc----CCCCC
Q 005688 127 CSGQGVCNHELG--QCRCFHGFR----GKGCS 152 (683)
Q Consensus 127 C~~~G~C~~~~G--~C~C~~G~~----G~~Ce 152 (683)
|++ .|....| .|.|++||+ |..|+
T Consensus 137 C~~--~C~n~~g~~~C~C~~Gy~l~~d~~~C~ 166 (170)
T 1szb_A 137 CDH--HCHNHLGGFYCSCRAGYVLHRNKRTCS 166 (170)
T ss_dssp SSS--EEEEETTEEEEECCTTEEECTTSSCEE
T ss_pred cCC--ccccCCCCEEEeCCCCcEECCCCCccc
Confidence 764 6876666 899999998 55564
No 165
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=28.13 E-value=14 Score=37.24 Aligned_cols=32 Identities=19% Similarity=0.284 Sum_probs=22.9
Q ss_pred CCCCCCCccccCCcccccccccccccccccCCCCCC--CCCccc
Q 005688 233 TTNGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLL--GQFCEV 274 (683)
Q Consensus 233 ~~~C~~~G~C~~~~~~~~~~g~c~~g~C~C~~~G~~--G~~C~~ 274 (683)
..+|+.++.|.+..+ .+.|.|+ +||. |..|..
T Consensus 12 ~~~C~~~a~C~Nt~G---------sy~C~C~-~Gy~GnG~~C~d 45 (285)
T 1gl4_A 12 RHQCSVHAECRDYAT---------GFCCRCV-ANYTGNGRQCVA 45 (285)
T ss_dssp GGGSCTTEEEEECSS---------CEEEEEC-TTEEECSSSEEE
T ss_pred CCCCCCCCEeEcCCC---------CeEEEcC-CCCCCCCCcCCC
Confidence 345777788876543 5799999 9998 555653
No 166
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=27.99 E-value=41 Score=34.08 Aligned_cols=42 Identities=12% Similarity=0.063 Sum_probs=34.3
Q ss_pred chhHHHHhhcCceecccCC-CCCchhHHHHHhcCceeEEeeCCe
Q 005688 628 SENYHEDLSSSVFCGVLPG-DGWSGRMEDSILQGCIPVVIQCKF 670 (683)
Q Consensus 628 ~~~y~~~m~~S~FCL~p~G-d~~s~Rl~dAi~~GCIPViisD~~ 670 (683)
..+..+.|+.|.+.+.|.- .+.+.-++|||.+|+ |||.+|.-
T Consensus 261 ~~~~~~~~~~ad~~v~ps~~e~~~~~~~Ea~a~G~-Pvi~~~~~ 303 (374)
T 2iw1_A 261 RNDVSELMAAADLLLHPAYQEAAGIVLLEAITAGL-PVLTTAVC 303 (374)
T ss_dssp CSCHHHHHHHCSEEEECCSCCSSCHHHHHHHHHTC-CEEEETTS
T ss_pred cccHHHHHHhcCEEEeccccCCcccHHHHHHHCCC-CEEEecCC
Confidence 4567899999999988764 356777999999998 99998853
No 167
>3tbd_A Netrin-G2, laminet-2; laminin N-terminal domain, domain VI, LE-domain, N neuronal cell adhesion molecule, netrin G ligand 2, nervous system; HET: NAG; 1.80A {Homo sapiens} PDB: 3zyg_A* 3zyi_B*
Probab=27.73 E-value=25 Score=36.40 Aligned_cols=28 Identities=32% Similarity=0.865 Sum_probs=22.7
Q ss_pred CCCCCC-EEeCCCC--ceeeCCCCcCCCCCc
Q 005688 126 DCSGQG-VCNHELG--QCRCFHGFRGKGCSE 153 (683)
Q Consensus 126 ~C~~~G-~C~~~~G--~C~C~~G~~G~~Ce~ 153 (683)
.|+||+ .|....| .|.|..+..|.+|+.
T Consensus 271 ~CnGHA~~C~~~~g~~~C~C~HnT~G~~Ce~ 301 (338)
T 3tbd_A 271 KCNLHANLCSMREGSLQCECEHNTTGPDCGK 301 (338)
T ss_dssp CCTTBCSCEEEETTEEEECCCTTEESTTSCE
T ss_pred cccCCcCccCCCCCCceecCCCCCCCCCCcc
Confidence 577774 6876666 699999999999986
No 168
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*
Probab=27.71 E-value=26 Score=41.47 Aligned_cols=32 Identities=25% Similarity=0.627 Sum_probs=25.6
Q ss_pred CCCCCCCCCCEEeCCCC--ceeeCCCCcCCCCCcc
Q 005688 122 SCKSDCSGQGVCNHELG--QCRCFHGFRGKGCSER 154 (683)
Q Consensus 122 ~C~~~C~~~G~C~~~~G--~C~C~~G~~G~~Ce~~ 154 (683)
.|. +|.|+|.+....+ .|.|++||.|..|+..
T Consensus 501 ~C~-PC~ngg~~~l~g~~C~C~C~~g~~G~~Ce~~ 534 (913)
T 3t5o_A 501 QCA-PCPNNGRPTLSGTECLCVCQSGTYGENCEKQ 534 (913)
T ss_dssp GSC-CBTTTBEEEEETTEEEEECCTTBCSTTSCCB
T ss_pred cCC-CCCCCCEeecCCCceEEEccCCccccCccCc
Confidence 343 6999999985333 6789999999999985
No 169
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=24.50 E-value=15 Score=33.78 Aligned_cols=35 Identities=26% Similarity=0.780 Sum_probs=21.3
Q ss_pred CCCCCCCccccCCCCcCC------CCCCCceec----CCeeecCCCcc
Q 005688 265 DGLLGQFCEVPVSSTCVN------QCSGHGHCR----GGFCQCDSGWY 302 (683)
Q Consensus 265 ~G~~G~~C~~~~~~~C~~------~C~~~G~C~----~g~C~C~~G~~ 302 (683)
.||.+..+... ...|.. .|.+ .|. ...|.|.+||.
T Consensus 113 ~Gf~~~~~~~d-i~eC~~~~~~~~~C~~--~C~n~~g~~~C~C~~Gy~ 157 (170)
T 1szb_A 113 TGFEAFYAAED-IDECQVAPGEAPTCDH--HCHNHLGGFYCSCRAGYV 157 (170)
T ss_dssp CEEEEEEEEEE-CCTTCCCTTSCCSSSS--EEEEETTEEEEECCTTEE
T ss_pred cCceeeeeccc-cCcccCCCCCCCccCC--ccccCCCCEEEeCCCCcE
Confidence 56666655433 234542 1654 575 23899999998
No 170
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=23.47 E-value=47 Score=33.65 Aligned_cols=37 Identities=8% Similarity=0.055 Sum_probs=31.0
Q ss_pred hhHHHHhhcCceecccCCCCCchhHHHHHhcCceeEEeeCC
Q 005688 629 ENYHEDLSSSVFCGVLPGDGWSGRMEDSILQGCIPVVIQCK 669 (683)
Q Consensus 629 ~~y~~~m~~S~FCL~p~Gd~~s~Rl~dAi~~GCIPViisD~ 669 (683)
.+..+.|+.+...+.|.| +.-+.|||.+|+ |||.++.
T Consensus 246 ~~~~~~~~~ad~~v~~sg---~~~~~EAma~G~-Pvi~~~~ 282 (364)
T 1f0k_A 246 DDMAAAYAWADVVVCRSG---ALTVSEIAAAGL-PALFVPF 282 (364)
T ss_dssp SCHHHHHHHCSEEEECCC---HHHHHHHHHHTC-CEEECCC
T ss_pred hhHHHHHHhCCEEEECCc---hHHHHHHHHhCC-CEEEeeC
Confidence 567899999999999876 455999999995 8888874
No 171
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=20.00 E-value=46 Score=29.73 Aligned_cols=25 Identities=36% Similarity=0.828 Sum_probs=17.8
Q ss_pred CCCCCCEEeCCCC--ceeeCCCCc----CCCCC
Q 005688 126 DCSGQGVCNHELG--QCRCFHGFR----GKGCS 152 (683)
Q Consensus 126 ~C~~~G~C~~~~G--~C~C~~G~~----G~~Ce 152 (683)
.|. +.|....| .|.|++||. |..|+
T Consensus 127 ~C~--~~C~n~~g~~~C~C~~Gy~l~~~~~~C~ 157 (159)
T 1nzi_A 127 PCS--HFCNNFIGGYFCSCPPEYFLHDDMKNCG 157 (159)
T ss_dssp CSS--SEEEEETTEEEEECCTTCEECTTSSCEE
T ss_pred CCC--CcccCcCCCEEEecCCCcEECCCCCccc
Confidence 464 47865555 899999998 55554
Done!