BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005691
(683 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 229 bits (584), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 131/310 (42%), Positives = 185/310 (59%), Gaps = 24/310 (7%)
Query: 303 FKIQDLERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQG-DAEFCNEVE 361
F +++L+ A+D FS KN +GRGGFG VYKG L DGT VAVK++ E QG + +F EVE
Sbjct: 28 FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVE 87
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
+IS HRNL+ LRG C+ +ER LVY YM NG+V L ++ PL
Sbjct: 88 MISMAVHRNLLRLRGFCMTP------TERLLVYPYMANGSVASCLRERPE-----SQPPL 136
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
WP+R+ I L A+GLAYLH P I HRD+KA NILLD + A V DFGLAK
Sbjct: 137 DWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 196
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLSTSGSPRACLI 541
H+ V GT G++APEY G+ +EK+DV+ +GV++LE++ G++A DL+ + ++
Sbjct: 197 XHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVML 256
Query: 542 TDWVWSLVKAGKVWQALDPSL---LKEDDFLSLNPKAIMERFVLVGILCAHVMVALRPTI 598
DWV L+K K+ +D L K+++ +E+ + V +LC RP +
Sbjct: 257 LDWVKGLLKEKKLEALVDVDLQGNYKDEE---------VEQLIQVALLCTQSSPMERPKM 307
Query: 599 SDALKMLEGD 608
S+ ++MLEGD
Sbjct: 308 SEVVRMLEGD 317
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 223 bits (567), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 128/310 (41%), Positives = 182/310 (58%), Gaps = 24/310 (7%)
Query: 303 FKIQDLERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQG-DAEFCNEVE 361
F +++L+ A+D F KN +GRGGFG VYKG L DG VAVK++ E QG + +F EVE
Sbjct: 20 FSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVE 79
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
+IS HRNL+ LRG C+ +ER LVY YM NG+V L ++ PL
Sbjct: 80 MISMAVHRNLLRLRGFCMTP------TERLLVYPYMANGSVASCLRERPE-----SQPPL 128
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
WP+R+ I L A+GLAYLH P I HRD+KA NILLD + A V DFGLAK
Sbjct: 129 DWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 188
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLSTSGSPRACLI 541
H+ V G G++APEY G+ +EK+DV+ +GV++LE++ G++A DL+ + ++
Sbjct: 189 XHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVML 248
Query: 542 TDWVWSLVKAGKVWQALDPSL---LKEDDFLSLNPKAIMERFVLVGILCAHVMVALRPTI 598
DWV L+K K+ +D L K+++ +E+ + V +LC RP +
Sbjct: 249 LDWVKGLLKEKKLEALVDVDLQGNYKDEE---------VEQLIQVALLCTQSSPMERPKM 299
Query: 599 SDALKMLEGD 608
S+ ++MLEGD
Sbjct: 300 SEVVRMLEGD 309
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 196 bits (497), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 123/302 (40%), Positives = 175/302 (57%), Gaps = 25/302 (8%)
Query: 307 DLERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNL 366
DLE AT+ F K IG G FG VYKG+L+DG VA+K+ QG EF E+E +S
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQR 426
+H +LV L G C +ER +E L+Y YM NGN+ HL+ GS + ++W QR
Sbjct: 93 RHPHLVSLIGFC-----DER-NEMILIYKYMENGNLKRHLY-----GSDLPTMSMSWEQR 141
Query: 427 KNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSRE-GQSHLT 485
I + A+GL YLH AI HRD+K+ NILLD + ++ DFG++K+ E GQ+HL
Sbjct: 142 LEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLX 198
Query: 486 TRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLSTSGSPRACL-ITDW 544
V GT GY+ PEY + G+LTEKSDVYSFGVV+ E++C R A+ S PR + + +W
Sbjct: 199 XVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSL---PREMVNLAEW 255
Query: 545 VWSLVKAGKVWQALDPSLLKEDDFLSLNPKAIMERFVLVGILCAHVMVALRPTISDALKM 604
G++ Q +DP+L + + P++ + +F + C + RP++ D L
Sbjct: 256 AVESHNNGQLEQIVDPNLADK-----IRPES-LRKFGDTAVKCLALSSEDRPSMGDVLWK 309
Query: 605 LE 606
LE
Sbjct: 310 LE 311
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 193 bits (490), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 122/302 (40%), Positives = 174/302 (57%), Gaps = 25/302 (8%)
Query: 307 DLERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNL 366
DLE AT+ F K IG G FG VYKG+L+DG VA+K+ QG EF E+E +S
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQR 426
+H +LV L G C +ER +E L+Y YM NGN+ HL+ GS + ++W QR
Sbjct: 93 RHPHLVSLIGFC-----DER-NEMILIYKYMENGNLKRHLY-----GSDLPTMSMSWEQR 141
Query: 427 KNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSRE-GQSHLT 485
I + A+GL YLH AI HRD+K+ NILLD + ++ DFG++K+ E Q+HL
Sbjct: 142 LEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLX 198
Query: 486 TRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLSTSGSPRACL-ITDW 544
V GT GY+ PEY + G+LTEKSDVYSFGVV+ E++C R A+ S PR + + +W
Sbjct: 199 XVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSL---PREMVNLAEW 255
Query: 545 VWSLVKAGKVWQALDPSLLKEDDFLSLNPKAIMERFVLVGILCAHVMVALRPTISDALKM 604
G++ Q +DP+L + + P++ + +F + C + RP++ D L
Sbjct: 256 AVESHNNGQLEQIVDPNLADK-----IRPES-LRKFGDTAVKCLALSSEDRPSMGDVLWK 309
Query: 605 LE 606
LE
Sbjct: 310 LE 311
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 98/238 (41%), Positives = 142/238 (59%), Gaps = 28/238 (11%)
Query: 303 FKIQDLERATDKFSQK------NFIGRGGFGLVYKGILQDGTTVAVKKVIE----SDFQG 352
F +L+ T+ F ++ N +G GGFG+VYKG + + TTVAVKK+ + +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 73
Query: 353 DAEFCNEVEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFND 412
+F E+++++ +H NLV L G DGD + LVY YMPNG++ D L S D
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSS-DGD-----DLCLVYVYMPNGSLLDRL--SCLD 125
Query: 413 GSGVAKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFG 472
G+ PL+W R I A G+ +LH + HRDIK+ NILLD A+++DFG
Sbjct: 126 GTP----PLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFG 178
Query: 473 LAKQSRE-GQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALD 529
LA+ S + Q+ + +R+ GT Y+APE AL G++T KSD+YSFGVV+LEI+ G A+D
Sbjct: 179 LARASEKFAQTVMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVD 235
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 148 bits (374), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 98/238 (41%), Positives = 141/238 (59%), Gaps = 28/238 (11%)
Query: 303 FKIQDLERATDKFSQK------NFIGRGGFGLVYKGILQDGTTVAVKKVIE----SDFQG 352
F +L+ T+ F ++ N +G GGFG+VYKG + + TTVAVKK+ + +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 73
Query: 353 DAEFCNEVEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFND 412
+F E+++++ +H NLV L G DGD + LVY YMPNG++ D L S D
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSS-DGD-----DLCLVYVYMPNGSLLDRL--SCLD 125
Query: 413 GSGVAKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFG 472
G+ PL+W R I A G+ +LH + HRDIK+ NILLD A+++DFG
Sbjct: 126 GTP----PLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFG 178
Query: 473 LAKQSRE-GQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALD 529
LA+ S + Q+ + R+ GT Y+APE AL G++T KSD+YSFGVV+LEI+ G A+D
Sbjct: 179 LARASEKFAQTVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVD 235
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/238 (41%), Positives = 140/238 (58%), Gaps = 28/238 (11%)
Query: 303 FKIQDLERATDKFSQK------NFIGRGGFGLVYKGILQDGTTVAVKKVIE----SDFQG 352
F +L+ T+ F ++ N +G GGFG+VYKG + + TTVAVKK+ + +
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEEL 67
Query: 353 DAEFCNEVEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFND 412
+F E+++++ +H NLV L G DGD + LVY YMPNG++ D L S D
Sbjct: 68 KQQFDQEIKVMAKCQHENLVELLGFSS-DGD-----DLCLVYVYMPNGSLLDRL--SCLD 119
Query: 413 GSGVAKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFG 472
G+ PL+W R I A G+ +LH + HRDIK+ NILLD A+++DFG
Sbjct: 120 GTP----PLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFG 172
Query: 473 LAKQSRE-GQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALD 529
LA+ S + Q + R+ GT Y+APE AL G++T KSD+YSFGVV+LEI+ G A+D
Sbjct: 173 LARASEKFAQXVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVD 229
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 97/238 (40%), Positives = 136/238 (57%), Gaps = 28/238 (11%)
Query: 303 FKIQDLERATDKFSQK------NFIGRGGFGLVYKGILQDGTTVAVKKVIE----SDFQG 352
F +L+ T+ F ++ N G GGFG+VYKG + + TTVAVKK+ + +
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEEL 64
Query: 353 DAEFCNEVEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFND 412
+F E+++ + +H NLV L G DGD + LVY Y PNG++ D L S D
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSS-DGD-----DLCLVYVYXPNGSLLDRL--SCLD 116
Query: 413 GSGVAKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFG 472
G+ PL+W R I A G+ +LH + HRDIK+ NILLD A+++DFG
Sbjct: 117 GTP----PLSWHXRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFG 169
Query: 473 LAKQSRE-GQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALD 529
LA+ S + Q +R+ GT Y APE AL G++T KSD+YSFGVV+LEI+ G A+D
Sbjct: 170 LARASEKFAQXVXXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVD 226
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/239 (32%), Positives = 124/239 (51%), Gaps = 36/239 (15%)
Query: 311 ATDKFSQKNFIGRGGFGLVYKG-ILQDGTTVAVKKVIESDFQGDA-------EFCNEVEI 362
A ++ + IG+GGFGLV+KG +++D + VA+K +I D +G+ EF EV I
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 363 ISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLT 422
+SNL H N+V L G + +V +++P G++ L P+
Sbjct: 77 MSNLNHPNIVKLYGLM--------HNPPRMVMEFVPCGDLYHRLLDK--------AHPIK 120
Query: 423 WPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILL-----DADMRARVADFGLAKQS 477
W + ++LD+A G+ Y+ P I HRD+++ NI L +A + A+VADFGL++QS
Sbjct: 121 WSVKLRLMLDIALGIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQS 179
Query: 478 REGQSHLTTRVAGTHGYLAPEY--ALYGQLTEKSDVYSFGVVILEIMCGRKALDLSTSG 534
H + + G ++APE A TEK+D YSF +++ I+ G D + G
Sbjct: 180 ----VHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYG 234
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 123/239 (51%), Gaps = 36/239 (15%)
Query: 311 ATDKFSQKNFIGRGGFGLVYKG-ILQDGTTVAVKKVIESDFQGDA-------EFCNEVEI 362
A ++ + IG+GGFGLV+KG +++D + VA+K +I D +G+ EF EV I
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 363 ISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLT 422
+SNL H N+V L G + +V +++P G++ L P+
Sbjct: 77 MSNLNHPNIVKLYGLM--------HNPPRMVMEFVPCGDLYHRLLDK--------AHPIK 120
Query: 423 WPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILL-----DADMRARVADFGLAKQS 477
W + ++LD+A G+ Y+ P I HRD+++ NI L +A + A+VADFG ++QS
Sbjct: 121 WSVKLRLMLDIALGIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQS 179
Query: 478 REGQSHLTTRVAGTHGYLAPEY--ALYGQLTEKSDVYSFGVVILEIMCGRKALDLSTSG 534
H + + G ++APE A TEK+D YSF +++ I+ G D + G
Sbjct: 180 ----VHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYG 234
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 123/239 (51%), Gaps = 36/239 (15%)
Query: 311 ATDKFSQKNFIGRGGFGLVYKG-ILQDGTTVAVKKVIESDFQGDA-------EFCNEVEI 362
A ++ + IG+GGFGLV+KG +++D + VA+K +I D +G+ EF EV I
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 363 ISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLT 422
+SNL H N+V L G + +V +++P G++ L P+
Sbjct: 77 MSNLNHPNIVKLYGLM--------HNPPRMVMEFVPCGDLYHRLLDK--------AHPIK 120
Query: 423 WPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILL-----DADMRARVADFGLAKQS 477
W + ++LD+A G+ Y+ P I HRD+++ NI L +A + A+VADF L++QS
Sbjct: 121 WSVKLRLMLDIALGIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQS 179
Query: 478 REGQSHLTTRVAGTHGYLAPEY--ALYGQLTEKSDVYSFGVVILEIMCGRKALDLSTSG 534
H + + G ++APE A TEK+D YSF +++ I+ G D + G
Sbjct: 180 ----VHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYG 234
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 110/207 (53%), Gaps = 19/207 (9%)
Query: 318 KNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDA--EFCNEVEIISNLKHRNLVPLR 375
K IG G FG V++ G+ VAVK ++E DF + EF EV I+ L+H N+V
Sbjct: 42 KEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFM 100
Query: 376 GCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAK 435
G + +V +Y+ G++ L S A+ L +R ++ DVAK
Sbjct: 101 GAVT------QPPNLSIVTEYLSRGSLYRLLHKSG------AREQLDERRRLSMAYDVAK 148
Query: 436 GLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR-VAGTHGY 494
G+ YLH P I HR++K+ N+L+D +V DFGL++ + + L+++ AGT +
Sbjct: 149 GMNYLH-NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL--KASTFLSSKSAAGTPEW 205
Query: 495 LAPEYALYGQLTEKSDVYSFGVVILEI 521
+APE EKSDVYSFGV++ E+
Sbjct: 206 MAPEVLRDEPSNEKSDVYSFGVILWEL 232
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 106/206 (51%), Gaps = 17/206 (8%)
Query: 318 KNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDA--EFCNEVEIISNLKHRNLVPLR 375
K IG G FG V++ G+ VAVK ++E DF + EF EV I+ L+H N+V
Sbjct: 42 KEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFM 100
Query: 376 GCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAK 435
G + +V +Y+ G++ L S A+ L +R ++ DVAK
Sbjct: 101 GAVT------QPPNLSIVTEYLSRGSLYRLLHKSG------AREQLDERRRLSMAYDVAK 148
Query: 436 GLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGYL 495
G+ YLH P I HRD+K+ N+L+D +V DFGL++ + + AGT ++
Sbjct: 149 GMNYLH-NRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRL-KASXFLXSKXAAGTPEWM 206
Query: 496 APEYALYGQLTEKSDVYSFGVVILEI 521
APE EKSDVYSFGV++ E+
Sbjct: 207 APEVLRDEPSNEKSDVYSFGVILWEL 232
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 120/260 (46%), Gaps = 34/260 (13%)
Query: 292 PKLRPNTGSIWFKIQDLERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQ 351
P +P T + ++ R + + K +G+G FG V+ G T VA+K +
Sbjct: 165 PTSKPQTQGLAKDAWEIPRESLRLEVK--LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS 222
Query: 352 GDAEFCNEVEIISNLKHRNLVPLRGCCVVDGDNERGSER--YLVYDYMPNGNVDDHLFPS 409
+A F E +++ L+H LV L SE Y+V +YM G++ D L
Sbjct: 223 PEA-FLQEAQVMKKLRHEKLVQLYAVV---------SEEPIYIVTEYMSKGSLLDFL--- 269
Query: 410 FNDGSGVAKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVA 469
G + L PQ ++ +A G+AY+ + HRD++A NIL+ ++ +VA
Sbjct: 270 ----KGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVA 322
Query: 470 DFGLAKQSREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEI-------- 521
DFGLA+ + + + APE ALYG+ T KSDV+SFG+++ E+
Sbjct: 323 DFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 382
Query: 522 --MCGRKALDLSTSGSPRAC 539
M R+ LD G C
Sbjct: 383 PGMVNREVLDQVERGYRMPC 402
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 120/260 (46%), Gaps = 34/260 (13%)
Query: 292 PKLRPNTGSIWFKIQDLERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQ 351
P +P T + ++ R + + K +G+G FG V+ G T VA+K +
Sbjct: 165 PTSKPQTQGLAKDAWEIPRESLRLEVK--LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS 222
Query: 352 GDAEFCNEVEIISNLKHRNLVPLRGCCVVDGDNERGSER--YLVYDYMPNGNVDDHLFPS 409
+A F E +++ L+H LV L SE Y+V +YM G++ D L
Sbjct: 223 PEA-FLQEAQVMKKLRHEKLVQLYAVV---------SEEPIYIVTEYMSKGSLLDFL--- 269
Query: 410 FNDGSGVAKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVA 469
G + L PQ ++ +A G+AY+ + HRD++A NIL+ ++ +VA
Sbjct: 270 ----KGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVA 322
Query: 470 DFGLAKQSREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEI-------- 521
DFGLA+ + + + APE ALYG+ T KSDV+SFG+++ E+
Sbjct: 323 DFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 382
Query: 522 --MCGRKALDLSTSGSPRAC 539
M R+ LD G C
Sbjct: 383 PGMVNREVLDQVERGYRMPC 402
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 120/260 (46%), Gaps = 34/260 (13%)
Query: 292 PKLRPNTGSIWFKIQDLERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQ 351
P +P T + ++ R + + K +G+G FG V+ G T VA+K +
Sbjct: 165 PTSKPQTQGLAKDAWEIPRESLRLEVK--LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS 222
Query: 352 GDAEFCNEVEIISNLKHRNLVPLRGCCVVDGDNERGSER--YLVYDYMPNGNVDDHLFPS 409
+A F E +++ L+H LV L SE Y+V +YM G++ D L
Sbjct: 223 PEA-FLQEAQVMKKLRHEKLVQLYAVV---------SEEPIYIVGEYMSKGSLLDFL--- 269
Query: 410 FNDGSGVAKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVA 469
G + L PQ ++ +A G+AY+ + HRD++A NIL+ ++ +VA
Sbjct: 270 ----KGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVA 322
Query: 470 DFGLAKQSREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEI-------- 521
DFGLA+ + + + APE ALYG+ T KSDV+SFG+++ E+
Sbjct: 323 DFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 382
Query: 522 --MCGRKALDLSTSGSPRAC 539
M R+ LD G C
Sbjct: 383 PGMVNREVLDQVERGYRMPC 402
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 120/260 (46%), Gaps = 34/260 (13%)
Query: 292 PKLRPNTGSIWFKIQDLERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQ 351
P +P T + ++ R + + K +G+G FG V+ G T VA+K + +
Sbjct: 166 PTSKPQTQGLAKDAWEIPRESLRLEVK--LGQGCFGEVWMGTWNGTTRVAIKTLKPGNMS 223
Query: 352 GDAEFCNEVEIISNLKHRNLVPLRGCCVVDGDNERGSER--YLVYDYMPNGNVDDHLFPS 409
+A F E +++ L+H LV L SE Y+V +YM G++ D L
Sbjct: 224 PEA-FLQEAQVMKKLRHEKLVQLYAVV---------SEEPIYIVTEYMSKGSLLDFL--- 270
Query: 410 FNDGSGVAKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVA 469
G + L PQ ++ +A G+AY+ + HRD++A NIL+ ++ +VA
Sbjct: 271 ----KGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVA 323
Query: 470 DFGLAKQSREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEI-------- 521
DFGL + + + + APE ALYG+ T KSDV+SFG+++ E+
Sbjct: 324 DFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 383
Query: 522 --MCGRKALDLSTSGSPRAC 539
M R+ LD G C
Sbjct: 384 PGMVNREVLDQVERGYRMPC 403
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 119/258 (46%), Gaps = 30/258 (11%)
Query: 292 PKLRPNTGSIWFKIQDLERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQ 351
P +P T + ++ R + + K +G+G FG V+ G T VA+K +
Sbjct: 248 PTSKPQTQGLAKDAWEIPRESLRLEVK--LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS 305
Query: 352 GDAEFCNEVEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFN 411
+A F E +++ L+H LV L + Y+V +YM G++ D L
Sbjct: 306 PEA-FLQEAQVMKKLRHEKLVQLYAVVSEE-------PIYIVTEYMSKGSLLDFL----- 352
Query: 412 DGSGVAKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADF 471
G + L PQ ++ +A G+AY+ + HRD++A NIL+ ++ +VADF
Sbjct: 353 --KGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADF 407
Query: 472 GLAKQSREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEI---------- 521
GLA+ + + + APE ALYG+ T KSDV+SFG+++ E+
Sbjct: 408 GLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG 467
Query: 522 MCGRKALDLSTSGSPRAC 539
M R+ LD G C
Sbjct: 468 MVNREVLDQVERGYRMPC 485
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 109/231 (47%), Gaps = 32/231 (13%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPLRGCCVV 380
+G+G FG V+ G T VA+K + +A F E +++ L+H LV L
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVV-- 75
Query: 381 DGDNERGSER--YLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLA 438
SE Y+V +YM G++ D L G + L PQ ++ +A G+A
Sbjct: 76 -------SEEPIYIVTEYMSKGSLLDFL-------KGETGKYLRLPQLVDMAAQIASGMA 121
Query: 439 YLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGYLAPE 498
Y+ + HRD++A NIL+ ++ +VADFGLA+ + + + APE
Sbjct: 122 YVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 178
Query: 499 YALYGQLTEKSDVYSFGVVILEI----------MCGRKALDLSTSGSPRAC 539
ALYG+ T KSDV+SFG+++ E+ M R+ LD G C
Sbjct: 179 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC 229
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 109/231 (47%), Gaps = 32/231 (13%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPLRGCCVV 380
+G+G FG V+ G T VA+K + +A F E +++ L+H LV L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVV-- 82
Query: 381 DGDNERGSER--YLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLA 438
SE Y+V +YM G++ D L G + L PQ ++ +A G+A
Sbjct: 83 -------SEEPIYIVIEYMSKGSLLDFL-------KGEMGKYLRLPQLVDMAAQIASGMA 128
Query: 439 YLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGYLAPE 498
Y+ + HRD++A NIL+ ++ +VADFGLA+ + + + APE
Sbjct: 129 YVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPE 185
Query: 499 YALYGQLTEKSDVYSFGVVILEI----------MCGRKALDLSTSGSPRAC 539
ALYG+ T KSDV+SFG+++ E+ M R+ LD G C
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC 236
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 109/231 (47%), Gaps = 32/231 (13%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPLRGCCVV 380
+G+G FG V+ G T VA+K + +A F E +++ L+H LV L
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVV-- 71
Query: 381 DGDNERGSER--YLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLA 438
SE Y+V +YM G++ D L G + L PQ ++ +A G+A
Sbjct: 72 -------SEEPIYIVTEYMSKGSLLDFL-------KGEMGKYLRLPQLVDMAAQIASGMA 117
Query: 439 YLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGYLAPE 498
Y+ + HRD++A NIL+ ++ +VADFGLA+ + + + APE
Sbjct: 118 YVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 174
Query: 499 YALYGQLTEKSDVYSFGVVILEI----------MCGRKALDLSTSGSPRAC 539
ALYG+ T KSDV+SFG+++ E+ M R+ LD G C
Sbjct: 175 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC 225
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 109/231 (47%), Gaps = 32/231 (13%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPLRGCCVV 380
+G+G FG V+ G T VA+K + +A F E +++ L+H LV L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVV-- 82
Query: 381 DGDNERGSER--YLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLA 438
SE Y+V +YM G++ D L G + L PQ ++ +A G+A
Sbjct: 83 -------SEEPIYIVIEYMSKGSLLDFL-------KGEMGKYLRLPQLVDMAAQIASGMA 128
Query: 439 YLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGYLAPE 498
Y+ + HRD++A NIL+ ++ +VADFGLA+ + + + APE
Sbjct: 129 YVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 185
Query: 499 YALYGQLTEKSDVYSFGVVILEI----------MCGRKALDLSTSGSPRAC 539
ALYG+ T KSDV+SFG+++ E+ M R+ LD G C
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC 236
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 109/231 (47%), Gaps = 32/231 (13%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPLRGCCVV 380
+G+G FG V+ G T VA+K + +A F E +++ L+H LV L
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVV-- 73
Query: 381 DGDNERGSER--YLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLA 438
SE Y+V +YM G++ D L G + L PQ ++ +A G+A
Sbjct: 74 -------SEEPIYIVTEYMSKGSLLDFL-------KGEMGKYLRLPQLVDMAAQIASGMA 119
Query: 439 YLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGYLAPE 498
Y+ + HRD++A NIL+ ++ +VADFGLA+ + + + APE
Sbjct: 120 YVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 176
Query: 499 YALYGQLTEKSDVYSFGVVILEI----------MCGRKALDLSTSGSPRAC 539
ALYG+ T KSDV+SFG+++ E+ M R+ LD G C
Sbjct: 177 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC 227
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 109/231 (47%), Gaps = 32/231 (13%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPLRGCCVV 380
+G+G FG V+ G T VA+K + +A F E +++ L+H LV L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVV-- 82
Query: 381 DGDNERGSER--YLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLA 438
SE Y+V +YM G++ D L G + L PQ ++ +A G+A
Sbjct: 83 -------SEEPIYIVTEYMSKGSLLDFL-------KGEMGKYLRLPQLVDMAAQIASGMA 128
Query: 439 YLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGYLAPE 498
Y+ + HRD++A NIL+ ++ +VADFGLA+ + + + APE
Sbjct: 129 YVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 185
Query: 499 YALYGQLTEKSDVYSFGVVILEI----------MCGRKALDLSTSGSPRAC 539
ALYG+ T KSDV+SFG+++ E+ M R+ LD G C
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC 236
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 109/231 (47%), Gaps = 32/231 (13%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPLRGCCVV 380
+G+G FG V+ G T VA+K + +A F E +++ L+H LV L
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVV-- 79
Query: 381 DGDNERGSER--YLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLA 438
SE Y+V +YM G++ D L G + L PQ ++ +A G+A
Sbjct: 80 -------SEEPIYIVTEYMNKGSLLDFL-------KGETGKYLRLPQLVDMSAQIASGMA 125
Query: 439 YLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGYLAPE 498
Y+ + HRD++A NIL+ ++ +VADFGLA+ + + + APE
Sbjct: 126 YVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 182
Query: 499 YALYGQLTEKSDVYSFGVVILEI----------MCGRKALDLSTSGSPRAC 539
ALYG+ T KSDV+SFG+++ E+ M R+ LD G C
Sbjct: 183 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC 233
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 109/231 (47%), Gaps = 32/231 (13%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPLRGCCVV 380
+G+G FG V+ G T VA+K + +A F E +++ L+H LV L
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVV-- 79
Query: 381 DGDNERGSER--YLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLA 438
SE Y+V +YM G++ D L G + L PQ ++ +A G+A
Sbjct: 80 -------SEEPIYIVTEYMNKGSLLDFL-------KGETGKYLRLPQLVDMSAQIASGMA 125
Query: 439 YLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGYLAPE 498
Y+ + HRD++A NIL+ ++ +VADFGLA+ + + + APE
Sbjct: 126 YVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPE 182
Query: 499 YALYGQLTEKSDVYSFGVVILEI----------MCGRKALDLSTSGSPRAC 539
ALYG+ T KSDV+SFG+++ E+ M R+ LD G C
Sbjct: 183 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC 233
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 109/231 (47%), Gaps = 32/231 (13%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPLRGCCVV 380
+G+G FG V+ G T VA+K + +A F E +++ L+H LV L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVV-- 82
Query: 381 DGDNERGSER--YLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLA 438
SE Y+V +YM G++ D L G + L PQ ++ +A G+A
Sbjct: 83 -------SEEPIYIVCEYMSKGSLLDFL-------KGEMGKYLRLPQLVDMAAQIASGMA 128
Query: 439 YLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGYLAPE 498
Y+ + HRD++A NIL+ ++ +VADFGLA+ + + + APE
Sbjct: 129 YVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 185
Query: 499 YALYGQLTEKSDVYSFGVVILEI----------MCGRKALDLSTSGSPRAC 539
ALYG+ T KSDV+SFG+++ E+ M R+ LD G C
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC 236
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 109/231 (47%), Gaps = 32/231 (13%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPLRGCCVV 380
+G+G FG V+ G T VA+K + +A F E +++ ++H LV L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKIRHEKLVQLYAVV-- 82
Query: 381 DGDNERGSER--YLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLA 438
SE Y+V +YM G++ D L G + L PQ ++ +A G+A
Sbjct: 83 -------SEEPIYIVTEYMSKGSLLDFL-------KGEMGKYLRLPQLVDMAAQIASGMA 128
Query: 439 YLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGYLAPE 498
Y+ + HRD++A NIL+ ++ +VADFGLA+ + + + APE
Sbjct: 129 YVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 185
Query: 499 YALYGQLTEKSDVYSFGVVILEI----------MCGRKALDLSTSGSPRAC 539
ALYG+ T KSDV+SFG+++ E+ M R+ LD G C
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC 236
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 108/231 (46%), Gaps = 32/231 (13%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPLRGCCVV 380
+G+G FG V+ G T VA+K + +A F E +++ L+H LV L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVV-- 82
Query: 381 DGDNERGSER--YLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLA 438
SE Y+V +YM G + D L G + L PQ ++ +A G+A
Sbjct: 83 -------SEEPIYIVMEYMSKGCLLDFL-------KGEMGKYLRLPQLVDMAAQIASGMA 128
Query: 439 YLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGYLAPE 498
Y+ + HRD++A NIL+ ++ +VADFGLA+ + + + APE
Sbjct: 129 YVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 185
Query: 499 YALYGQLTEKSDVYSFGVVILEI----------MCGRKALDLSTSGSPRAC 539
ALYG+ T KSDV+SFG+++ E+ M R+ LD G C
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC 236
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 108/231 (46%), Gaps = 32/231 (13%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPLRGCCVV 380
+G+G FG V+ G T VA+K + +A F E +++ L+H LV L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVV-- 82
Query: 381 DGDNERGSER--YLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLA 438
SE Y+V +YM G++ D L G + L PQ ++ +A G+A
Sbjct: 83 -------SEEPIYIVTEYMSKGSLLDFL-------KGEMGKYLRLPQLVDMAAQIASGMA 128
Query: 439 YLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGYLAPE 498
Y+ + HRD+ A NIL+ ++ +VADFGLA+ + + + APE
Sbjct: 129 YVE---RMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 185
Query: 499 YALYGQLTEKSDVYSFGVVILEI----------MCGRKALDLSTSGSPRAC 539
ALYG+ T KSDV+SFG+++ E+ M R+ LD G C
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC 236
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 108/231 (46%), Gaps = 32/231 (13%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPLRGCCVV 380
+G+G FG V+ G T VA+K + +A F E +++ L+H LV L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVV-- 82
Query: 381 DGDNERGSER--YLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLA 438
SE Y+V +YM G + D L G + L PQ ++ +A G+A
Sbjct: 83 -------SEEPIYIVTEYMSKGCLLDFL-------KGEMGKYLRLPQLVDMAAQIASGMA 128
Query: 439 YLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGYLAPE 498
Y+ + HRD++A NIL+ ++ +VADFGLA+ + + + APE
Sbjct: 129 YVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 185
Query: 499 YALYGQLTEKSDVYSFGVVILEI----------MCGRKALDLSTSGSPRAC 539
ALYG+ T KSDV+SFG+++ E+ M R+ LD G C
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC 236
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 107/229 (46%), Gaps = 28/229 (12%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPLRGCCVV 380
+G+G FG V+ G T VA+K + +A F E +++ L+H LV L
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 74
Query: 381 DGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLAYL 440
+ +V +YM G++ D L G + L PQ ++ +A G+AY+
Sbjct: 75 EPIX-------IVTEYMSKGSLLDFL-------KGETGKYLRLPQLVDMAAQIASGMAYV 120
Query: 441 HYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGYLAPEYA 500
+ HRD++A NIL+ ++ +VADFGLA+ + + + APE A
Sbjct: 121 E---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAA 177
Query: 501 LYGQLTEKSDVYSFGVVILEI----------MCGRKALDLSTSGSPRAC 539
LYG+ T KSDV+SFG+++ E+ M R+ LD G C
Sbjct: 178 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC 226
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 102/205 (49%), Gaps = 22/205 (10%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPLRGCCVV 380
+G G FG V+ G T VA+K + ++ F E +I+ LKH LV L
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPES-FLEEAQIMKKLKHDKLVQLYAVV-- 73
Query: 381 DGDNERGSER--YLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLA 438
SE Y+V +YM G++ D L DG G R L P ++ VA G+A
Sbjct: 74 -------SEEPIYIVTEYMNKGSLLDFL----KDGEG---RALKLPNLVDMAAQVAAGMA 119
Query: 439 YLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGYLAPE 498
Y+ + HRD+++ NIL+ + ++ADFGLA+ + + + APE
Sbjct: 120 YIE---RMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPE 176
Query: 499 YALYGQLTEKSDVYSFGVVILEIMC 523
ALYG+ T KSDV+SFG+++ E++
Sbjct: 177 AALYGRFTIKSDVWSFGILLTELVT 201
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 109/222 (49%), Gaps = 20/222 (9%)
Query: 302 WFKIQDLERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVE 361
W ++ R T K ++ +G G FG V+ G T VAVK + + DA F E
Sbjct: 6 WEDEWEVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEAN 62
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
++ L+H+ LV L + Y++ +YM NG++ D L SG+ L
Sbjct: 63 LMKQLQHQRLVRLYAVVTQEPI-------YIITEYMENGSLVDFL----KTPSGIK---L 108
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
T + ++ +A+G+A++ + HRD++A NIL+ + ++ADFGLA+ + +
Sbjct: 109 TINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 165
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMC 523
+ APE YG T KSDV+SFG+++ EI+
Sbjct: 166 XTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 207
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 109/222 (49%), Gaps = 20/222 (9%)
Query: 302 WFKIQDLERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVE 361
W ++ R T K ++ +G G FG V+ G T VAVK + + DA F E
Sbjct: 5 WEDEWEVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEAN 61
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
++ L+H+ LV L + Y++ +YM NG++ D L SG+ L
Sbjct: 62 LMKQLQHQRLVRLYAVVTQEPI-------YIITEYMENGSLVDFL----KTPSGIK---L 107
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
T + ++ +A+G+A++ + HRD++A NIL+ + ++ADFGLA+ + +
Sbjct: 108 TINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 164
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMC 523
+ APE YG T KSDV+SFG+++ EI+
Sbjct: 165 XTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 206
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 109/222 (49%), Gaps = 20/222 (9%)
Query: 302 WFKIQDLERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVE 361
W ++ R T K ++ +G G FG V+ G T VAVK + + DA F E
Sbjct: 4 WEDEWEVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEAN 60
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
++ L+H+ LV L + Y++ +YM NG++ D L SG+ L
Sbjct: 61 LMKQLQHQRLVRLYAVVTQEPI-------YIITEYMENGSLVDFL----KTPSGIK---L 106
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
T + ++ +A+G+A++ + HRD++A NIL+ + ++ADFGLA+ + +
Sbjct: 107 TINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 163
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMC 523
+ APE YG T KSDV+SFG+++ EI+
Sbjct: 164 XTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 109/222 (49%), Gaps = 20/222 (9%)
Query: 302 WFKIQDLERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVE 361
W ++ R T K ++ +G G FG V+ G T VAVK + + DA F E
Sbjct: 13 WEDEWEVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEAN 69
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
++ L+H+ LV L + Y++ +YM NG++ D L SG+ L
Sbjct: 70 LMKQLQHQRLVRLYAVVTQEPI-------YIITEYMENGSLVDFL----KTPSGIK---L 115
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
T + ++ +A+G+A++ + HRD++A NIL+ + ++ADFGLA+ + +
Sbjct: 116 TINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 172
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMC 523
+ APE YG T KSDV+SFG+++ EI+
Sbjct: 173 XTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 214
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 109/222 (49%), Gaps = 20/222 (9%)
Query: 302 WFKIQDLERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVE 361
W ++ R T K ++ +G G FG V+ G T VAVK + + DA F E
Sbjct: 10 WEDEWEVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEAN 66
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
++ L+H+ LV L + Y++ +YM NG++ D L SG+ L
Sbjct: 67 LMKQLQHQRLVRLYAVVTQEPI-------YIITEYMENGSLVDFL----KTPSGIK---L 112
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
T + ++ +A+G+A++ + HRD++A NIL+ + ++ADFGLA+ + +
Sbjct: 113 TINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 169
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMC 523
+ APE YG T KSDV+SFG+++ EI+
Sbjct: 170 XTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 211
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 109/222 (49%), Gaps = 20/222 (9%)
Query: 302 WFKIQDLERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVE 361
W ++ R T K ++ +G G FG V+ G T VAVK + + DA F E
Sbjct: 4 WEDEWEVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEAN 60
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
++ L+H+ LV L + Y++ +YM NG++ D L SG+ L
Sbjct: 61 LMKQLQHQRLVRLYAVVTQEPI-------YIITEYMENGSLVDFL----KTPSGIK---L 106
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
T + ++ +A+G+A++ + HRD++A NIL+ + ++ADFGLA+ + +
Sbjct: 107 TINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 163
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMC 523
+ APE YG T KSDV+SFG+++ EI+
Sbjct: 164 XTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 109/222 (49%), Gaps = 20/222 (9%)
Query: 302 WFKIQDLERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVE 361
W ++ R T K ++ +G G FG V+ G T VAVK + + DA F E
Sbjct: 12 WEDEWEVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEAN 68
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
++ L+H+ LV L + Y++ +YM NG++ D L SG+ L
Sbjct: 69 LMKQLQHQRLVRLYAVVTQEPI-------YIITEYMENGSLVDFL----KTPSGIK---L 114
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
T + ++ +A+G+A++ + HRD++A NIL+ + ++ADFGLA+ + +
Sbjct: 115 TINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 171
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMC 523
+ APE YG T KSDV+SFG+++ EI+
Sbjct: 172 XTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 213
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 109/222 (49%), Gaps = 20/222 (9%)
Query: 302 WFKIQDLERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVE 361
W ++ R T K ++ +G G FG V+ G T VAVK + + DA F E
Sbjct: 4 WEDEWEVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEAN 60
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
++ L+H+ LV L + Y++ +YM NG++ D L SG+ L
Sbjct: 61 LMKQLQHQRLVRLYAVVTQEPI-------YIITEYMENGSLVDFL----KTPSGIK---L 106
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
T + ++ +A+G+A++ + HRD++A NIL+ + ++ADFGLA+ + +
Sbjct: 107 TINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 163
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMC 523
+ APE YG T KSDV+SFG+++ EI+
Sbjct: 164 YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 109/222 (49%), Gaps = 20/222 (9%)
Query: 302 WFKIQDLERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVE 361
W ++ R T K ++ +G G FG V+ G T VAVK + + DA F E
Sbjct: 9 WEDEWEVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEAN 65
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
++ L+H+ LV L + Y++ +YM NG++ D L SG+ L
Sbjct: 66 LMKQLQHQRLVRLYAVVTQEPI-------YIITEYMENGSLVDFL----KTPSGIK---L 111
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
T + ++ +A+G+A++ + HRD++A NIL+ + ++ADFGLA+ + +
Sbjct: 112 TINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 168
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMC 523
+ APE YG T KSDV+SFG+++ EI+
Sbjct: 169 YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 210
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 109/222 (49%), Gaps = 20/222 (9%)
Query: 302 WFKIQDLERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVE 361
W ++ R T K ++ +G G FG V+ G T VAVK + + DA F E
Sbjct: 10 WEDEWEVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEAN 66
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
++ L+H+ LV L + Y++ +YM NG++ D L SG+ L
Sbjct: 67 LMKQLQHQRLVRLYAVVTQEPI-------YIITEYMENGSLVDFL----KTPSGIK---L 112
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
T + ++ +A+G+A++ + HRD++A NIL+ + ++ADFGLA+ + +
Sbjct: 113 TINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 169
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMC 523
+ APE YG T KSDV+SFG+++ EI+
Sbjct: 170 YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 211
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 109/222 (49%), Gaps = 20/222 (9%)
Query: 302 WFKIQDLERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVE 361
W ++ R T K ++ +G G FG V+ G T VAVK + + DA F E
Sbjct: 14 WEDEWEVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEAN 70
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
++ L+H+ LV L + Y++ +YM NG++ D L SG+ L
Sbjct: 71 LMKQLQHQRLVRLYAVVTQEPI-------YIITEYMENGSLVDFL----KTPSGIK---L 116
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
T + ++ +A+G+A++ + HRD++A NIL+ + ++ADFGLA+ + +
Sbjct: 117 TINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 173
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMC 523
+ APE YG T KSDV+SFG+++ EI+
Sbjct: 174 YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 215
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 108/217 (49%), Gaps = 20/217 (9%)
Query: 307 DLERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNL 366
++ R T K ++ +G G FG V+ G T VAVK + + DA F E ++ L
Sbjct: 4 EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQL 60
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQR 426
+H+ LV L + Y++ +YM NG++ D L SG+ LT +
Sbjct: 61 QHQRLVRLYAVVTQEPI-------YIITEYMENGSLVDFL----KTPSGIK---LTINKL 106
Query: 427 KNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTT 486
++ +A+G+A++ + HRD++A NIL+ + ++ADFGLA+ + +
Sbjct: 107 LDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTARE 163
Query: 487 RVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMC 523
+ APE YG T KSDV+SFG+++ EI+
Sbjct: 164 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 200
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 108/222 (48%), Gaps = 20/222 (9%)
Query: 302 WFKIQDLERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVE 361
W ++ R T K ++ +G G G V+ G T VAVK + + DA F E
Sbjct: 4 WEDAWEVPRETLKLVER--LGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEAN 60
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
++ L+H+ LV L + Y++ +YM NG++ D L SG+ L
Sbjct: 61 LMKQLQHQRLVRLYAVVTQEPI-------YIITEYMENGSLVDFL----KTPSGIK---L 106
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
T + ++ +A+G+A++ + HRD++A NIL+ + ++ADFGLA+ + +
Sbjct: 107 TINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAE 163
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMC 523
+ APE YG T KSDV+SFG+++ EI+
Sbjct: 164 XTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 101/201 (50%), Gaps = 18/201 (8%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPLRGCCVV 380
IG G FGLV+ G + VA+K + E D +F E E++ L H LV L G C+
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSED-DFIEEAEVMMKLSHPKLVQLYGVCL- 92
Query: 381 DGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLAYL 440
+ LV+++M +G + D+L G A+ L + LDV +G+AYL
Sbjct: 93 -----EQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLL------GMCLDVCEGMAYL 139
Query: 441 HYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGYLAPEYA 500
+ + HRD+ A N L+ + +V+DFG+ + + Q +T + +PE
Sbjct: 140 E---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVF 196
Query: 501 LYGQLTEKSDVYSFGVVILEI 521
+ + + KSDV+SFGV++ E+
Sbjct: 197 SFSRYSSKSDVWSFGVLMWEV 217
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 111/220 (50%), Gaps = 21/220 (9%)
Query: 307 DLERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNL 366
++ R + K +K +G G FG V+ T VAVK + +A F E ++ L
Sbjct: 11 EIPRESLKLEKK--LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA-FLAEANVMKTL 67
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQR 426
+H LV L + Y++ ++M G++ D L ++GS K+PL P+
Sbjct: 68 QHDKLVKLHAVVTKEPI-------YIITEFMAKGSLLDFL--KSDEGS---KQPL--PKL 113
Query: 427 KNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTT 486
+ +A+G+A++ + HRD++A NIL+ A + ++ADFGLA+ + +
Sbjct: 114 IDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTARE 170
Query: 487 RVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMC-GR 525
+ APE +G T KSDV+SFG++++EI+ GR
Sbjct: 171 GAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGR 210
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 108/217 (49%), Gaps = 20/217 (9%)
Query: 307 DLERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNL 366
++ R T K ++ +G G FG V+ G T VAVK + + DA F E ++ L
Sbjct: 5 EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQL 61
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQR 426
+H+ LV L + Y++ +YM NG++ D L SG+ LT +
Sbjct: 62 QHQRLVRLYAVVTQEPI-------YIITEYMENGSLVDFL----KTPSGIK---LTINKL 107
Query: 427 KNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTT 486
++ +A+G+A++ + HR+++A NIL+ + ++ADFGLA+ + +
Sbjct: 108 LDMAAQIAEGMAFIE---ERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTARE 164
Query: 487 RVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMC 523
+ APE YG T KSDV+SFG+++ EI+
Sbjct: 165 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 201
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 110/242 (45%), Gaps = 27/242 (11%)
Query: 298 TGSIWFKIQD-LERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEF 356
T +++F+ D E + K+ +G G +G VY G+ + + K ++ D EF
Sbjct: 16 TENLYFQSMDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEF 75
Query: 357 CNEVEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGV 416
E ++ +KH NLV L G C ++ Y+V +YMP GN+ D+L
Sbjct: 76 LKEAAVMKEIKHPNLVQLLGVCTLE------PPFYIVTEYMPYGNLLDYL-------REC 122
Query: 417 AKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQ 476
+ +T + ++ + YL K HRD+ A N L+ + +VADFGL
Sbjct: 123 NREEVTAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHVVKVADFGL--- 176
Query: 477 SREGQSHLTTRVAGTH---GYLAPEYALYGQLTEKSDVYSFGVVILEI----MCGRKALD 529
SR T AG + APE Y + KSDV++FGV++ EI M +D
Sbjct: 177 SRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGID 236
Query: 530 LS 531
LS
Sbjct: 237 LS 238
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 114/249 (45%), Gaps = 42/249 (16%)
Query: 321 IGRGGFGLVY----KGIL--QDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPL 374
+G G FG V+ +L QD VAVK + E+ +F E E+++ L+H+++V
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 375 RGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFND------GSGVAKRPLTWPQRKN 428
G C G +V++YM +G+++ L D G VA PL Q
Sbjct: 86 FGVCT------EGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLA 139
Query: 429 IILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRV 488
+ VA G+ YL HRD+ N L+ + ++ DFG+ SR+ S RV
Sbjct: 140 VASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGM---SRDIYSTDYYRV 193
Query: 489 AGTH----GYLAPEYALYGQLTEKSDVYSFGVVILEI----------MCGRKALDLSTSG 534
G ++ PE LY + T +SDV+SFGVV+ EI + +A+D T G
Sbjct: 194 GGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQG 253
Query: 535 ----SPRAC 539
PRAC
Sbjct: 254 RELERPRAC 262
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 114/249 (45%), Gaps = 42/249 (16%)
Query: 321 IGRGGFGLVY----KGIL--QDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPL 374
+G G FG V+ +L QD VAVK + E+ +F E E+++ L+H+++V
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 375 RGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFND------GSGVAKRPLTWPQRKN 428
G C G +V++YM +G+++ L D G VA PL Q
Sbjct: 80 FGVCT------EGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLA 133
Query: 429 IILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRV 488
+ VA G+ YL HRD+ N L+ + ++ DFG+ SR+ S RV
Sbjct: 134 VASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGM---SRDIYSTDYYRV 187
Query: 489 AGTH----GYLAPEYALYGQLTEKSDVYSFGVVILEI----------MCGRKALDLSTSG 534
G ++ PE LY + T +SDV+SFGVV+ EI + +A+D T G
Sbjct: 188 GGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQG 247
Query: 535 ----SPRAC 539
PRAC
Sbjct: 248 RELERPRAC 256
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 114/249 (45%), Gaps = 42/249 (16%)
Query: 321 IGRGGFGLVY----KGIL--QDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPL 374
+G G FG V+ +L QD VAVK + E+ +F E E+++ L+H+++V
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 375 RGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFND------GSGVAKRPLTWPQRKN 428
G C G +V++YM +G+++ L D G VA PL Q
Sbjct: 109 FGVCT------EGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLA 162
Query: 429 IILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRV 488
+ VA G+ YL HRD+ N L+ + ++ DFG+ SR+ S RV
Sbjct: 163 VASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGM---SRDIYSTDYYRV 216
Query: 489 AGTH----GYLAPEYALYGQLTEKSDVYSFGVVILEI----------MCGRKALDLSTSG 534
G ++ PE LY + T +SDV+SFGVV+ EI + +A+D T G
Sbjct: 217 GGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQG 276
Query: 535 ----SPRAC 539
PRAC
Sbjct: 277 RELERPRAC 285
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 102/201 (50%), Gaps = 18/201 (8%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPLRGCCVV 380
IG G FGLV+ G + VA+K + E + +F E E++ L H LV L G C+
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCL- 72
Query: 381 DGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLAYL 440
+ LV+++M +G + D+L G A+ L + LDV +G+AYL
Sbjct: 73 -----EQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLL------GMCLDVCEGMAYL 119
Query: 441 HYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGYLAPEYA 500
+ ++ HRD+ A N L+ + +V+DFG+ + + Q +T + +PE
Sbjct: 120 E---EASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVF 176
Query: 501 LYGQLTEKSDVYSFGVVILEI 521
+ + + KSDV+SFGV++ E+
Sbjct: 177 SFSRYSSKSDVWSFGVLMWEV 197
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 101/201 (50%), Gaps = 18/201 (8%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPLRGCCVV 380
IG G FGLV+ G + VA+K + E + +F E E++ L H LV L G C+
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCL- 70
Query: 381 DGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLAYL 440
+ LV+++M +G + D+L G A+ L + LDV +G+AYL
Sbjct: 71 -----EQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLL------GMCLDVCEGMAYL 117
Query: 441 HYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGYLAPEYA 500
+ + HRD+ A N L+ + +V+DFG+ + + Q +T + +PE
Sbjct: 118 E---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVF 174
Query: 501 LYGQLTEKSDVYSFGVVILEI 521
+ + + KSDV+SFGV++ E+
Sbjct: 175 SFSRYSSKSDVWSFGVLMWEV 195
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 101/201 (50%), Gaps = 18/201 (8%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPLRGCCVV 380
IG G FGLV+ G + VA+K + E + +F E E++ L H LV L G C+
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCL- 75
Query: 381 DGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLAYL 440
+ LV+++M +G + D+L G A+ L + LDV +G+AYL
Sbjct: 76 -----EQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLL------GMCLDVCEGMAYL 122
Query: 441 HYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGYLAPEYA 500
+ + HRD+ A N L+ + +V+DFG+ + + Q +T + +PE
Sbjct: 123 E---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVF 179
Query: 501 LYGQLTEKSDVYSFGVVILEI 521
+ + + KSDV+SFGV++ E+
Sbjct: 180 SFSRYSSKSDVWSFGVLMWEV 200
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 102/218 (46%), Gaps = 26/218 (11%)
Query: 318 KNFIGRGGFGLVYKGIL------QDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNL 371
K +G G FG V+ QD VAVK + ++ +F E E+++NL+H ++
Sbjct: 18 KRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHI 77
Query: 372 VPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFND----GSGVAKRPLTWPQRK 427
V G CV G +V++YM +G+++ L D G LT Q
Sbjct: 78 VKFYGVCV------EGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQML 131
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+I +A G+ YL HRD+ N L+ ++ ++ DFG+ SR+ S R
Sbjct: 132 HIAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGM---SRDVYSTDYYR 185
Query: 488 VAGTH----GYLAPEYALYGQLTEKSDVYSFGVVILEI 521
V G ++ PE +Y + T +SDV+S GVV+ EI
Sbjct: 186 VGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEI 223
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 101/201 (50%), Gaps = 18/201 (8%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPLRGCCVV 380
IG G FGLV+ G + VA+K + E + +F E E++ L H LV L G C+
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCL- 72
Query: 381 DGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLAYL 440
+ LV+++M +G + D+L G A+ L + LDV +G+AYL
Sbjct: 73 -----EQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLL------GMCLDVCEGMAYL 119
Query: 441 HYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGYLAPEYA 500
+ + HRD+ A N L+ + +V+DFG+ + + Q +T + +PE
Sbjct: 120 E---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVF 176
Query: 501 LYGQLTEKSDVYSFGVVILEI 521
+ + + KSDV+SFGV++ E+
Sbjct: 177 SFSRYSSKSDVWSFGVLMWEV 197
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 109/217 (50%), Gaps = 20/217 (9%)
Query: 307 DLERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNL 366
++ R + K +K +G G FG V+ T VAVK + +A F E ++ L
Sbjct: 184 EIPRESLKLEKK--LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA-FLAEANVMKTL 240
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQR 426
+H LV L + Y++ ++M G++ D L ++GS K+PL P+
Sbjct: 241 QHDKLVKLHAVVTKE-------PIYIITEFMAKGSLLDFL--KSDEGS---KQPL--PKL 286
Query: 427 KNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTT 486
+ +A+G+A++ + HRD++A NIL+ A + ++ADFGLA+ + +
Sbjct: 287 IDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTARE 343
Query: 487 RVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMC 523
+ APE +G T KSDV+SFG++++EI+
Sbjct: 344 GAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVT 380
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 109/213 (51%), Gaps = 22/213 (10%)
Query: 318 KNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPLRGC 377
+ +GRG FG+V K + VA+K+ IES+ + A F E+ +S + H N+V L G
Sbjct: 14 EEVVGRGAFGVVCKAKWR-AKDVAIKQ-IESESERKA-FIVELRQLSRVNHPNIVKLYGA 70
Query: 378 CVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGL 437
C+ + LV +Y G++ + L + A ++W L ++G+
Sbjct: 71 CL--------NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW------CLQCSQGV 116
Query: 438 AYLHYGVKPAIYHRDIKATNILLDADMRA-RVADFGLAKQSREGQSHLTTRVAGTHGYLA 496
AYLH A+ HRD+K N+LL A ++ DFG A + Q+H+T G+ ++A
Sbjct: 117 AYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTAC---DIQTHMTNN-KGSAAWMA 172
Query: 497 PEYALYGQLTEKSDVYSFGVVILEIMCGRKALD 529
PE +EK DV+S+G+++ E++ RK D
Sbjct: 173 PEVFEGSNYSEKCDVFSWGIILWEVITRRKPFD 205
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 100/201 (49%), Gaps = 18/201 (8%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPLRGCCVV 380
IG G FGLV+ G + VA+K + E + +F E E++ L H LV L G C+
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCL- 73
Query: 381 DGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLAYL 440
+ LV ++M +G + D+L G A+ L + LDV +G+AYL
Sbjct: 74 -----EQAPICLVTEFMEHGCLSDYL--RTQRGLFAAETLL------GMCLDVCEGMAYL 120
Query: 441 HYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGYLAPEYA 500
+ + HRD+ A N L+ + +V+DFG+ + + Q +T + +PE
Sbjct: 121 E---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVF 177
Query: 501 LYGQLTEKSDVYSFGVVILEI 521
+ + + KSDV+SFGV++ E+
Sbjct: 178 SFSRYSSKSDVWSFGVLMWEV 198
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 116/232 (50%), Gaps = 47/232 (20%)
Query: 321 IGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQG--DAEFC-NEVEIISNLK-HRNLVPLR 375
+G+G +G+V+K I + G VAVKK+ ++ FQ DA+ E+ I++ L H N+V L
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDA-FQNSTDAQRTFREIMILTELSGHENIVNL- 74
Query: 376 GCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKN-IILDVA 434
V+ DN+R + YLV+DYM D V + + P K ++ +
Sbjct: 75 -LNVLRADNDR--DVYLVFDYMET------------DLHAVIRANILEPVHKQYVVYQLI 119
Query: 435 KGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAK------------------- 475
K + YLH G + HRD+K +NILL+A+ +VADFGL++
Sbjct: 120 KVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINEN 176
Query: 476 -QSREGQSHLTTRVAGTHGYLAPEYAL-YGQLTEKSDVYSFGVVILEIMCGR 525
++ + + T T Y APE L + T+ D++S G ++ EI+CG+
Sbjct: 177 TENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 109/213 (51%), Gaps = 22/213 (10%)
Query: 318 KNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPLRGC 377
+ +GRG FG+V K + VA+K+ IES+ + A F E+ +S + H N+V L G
Sbjct: 13 EEVVGRGAFGVVCKAKWR-AKDVAIKQ-IESESERKA-FIVELRQLSRVNHPNIVKLYGA 69
Query: 378 CVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGL 437
C+ + LV +Y G++ + L + A ++W L ++G+
Sbjct: 70 CL--------NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW------CLQCSQGV 115
Query: 438 AYLHYGVKPAIYHRDIKATNILLDADMRA-RVADFGLAKQSREGQSHLTTRVAGTHGYLA 496
AYLH A+ HRD+K N+LL A ++ DFG A + Q+H+T G+ ++A
Sbjct: 116 AYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTAC---DIQTHMTNN-KGSAAWMA 171
Query: 497 PEYALYGQLTEKSDVYSFGVVILEIMCGRKALD 529
PE +EK DV+S+G+++ E++ RK D
Sbjct: 172 PEVFEGSNYSEKCDVFSWGIILWEVITRRKPFD 204
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 105/221 (47%), Gaps = 29/221 (13%)
Query: 318 KNFIGRGGFGLVYKG------ILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNL 371
K +G G FG V+ +D VAVK + + +F E E+++NL+H ++
Sbjct: 20 KRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHI 79
Query: 372 VPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGV-------AKRPLTWP 424
V G C GD G +V++YM +G+++ L D + AK L
Sbjct: 80 VKFYGVC---GD---GDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLS 133
Query: 425 QRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHL 484
Q +I +A G+ YL HRD+ N L+ A++ ++ DFG+ SR+ S
Sbjct: 134 QMLHIASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGM---SRDVYSTD 187
Query: 485 TTRVAGTH----GYLAPEYALYGQLTEKSDVYSFGVVILEI 521
RV G ++ PE +Y + T +SDV+SFGV++ EI
Sbjct: 188 YYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEI 228
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 104/223 (46%), Gaps = 34/223 (15%)
Query: 307 DLERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNL 366
++ER TD + K+ +G G FG VY+G+ + + K ++ D EF E ++ +
Sbjct: 7 EMER-TD-ITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 64
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQR 426
KH NLV L G C R Y++ ++M GN+ D+L R +
Sbjct: 65 KHPNLVQLLGVCT------REPPFYIITEFMTYGNLLDYL------------RECNRQEV 106
Query: 427 KNIIL-----DVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
++L ++ + YL K HRD+ A N L+ + +VADFGL SR
Sbjct: 107 SAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGL---SRLMT 160
Query: 482 SHLTTRVAGTH---GYLAPEYALYGQLTEKSDVYSFGVVILEI 521
T AG + APE Y + + KSDV++FGV++ EI
Sbjct: 161 GDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 203
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 104/222 (46%), Gaps = 24/222 (10%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPLRGCCVV 380
+G G FG V+ G + T VAVK + A F E ++ L+H LV L
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQA-FLEEANLMKTLQHDKLVRLYAVVT- 78
Query: 381 DGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLAYL 440
R Y++ +YM G++ D L ++G V P+ + +A+G+AY+
Sbjct: 79 -----REEPIYIITEYMAKGSLLDFL--KSDEGGKV-----LLPKLIDFSAQIAEGMAYI 126
Query: 441 HYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGYLAPEYA 500
+ HRD++A N+L+ + ++ADFGLA+ + + + APE
Sbjct: 127 E---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAI 183
Query: 501 LYGQLTEKSDVYSFGVVILEIMC-------GRKALDLSTSGS 535
+G T KSDV+SFG+++ EI+ GR D+ T+ S
Sbjct: 184 NFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALS 225
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 113/233 (48%), Gaps = 27/233 (11%)
Query: 299 GSIWFKIQD---LERATDKFSQKNFIGRGGFGLVYK---GILQD--GTTVAVKKVIESDF 350
G++ F+ +D E KF Q+ +G+G FG V LQD G VAVKK+ S
Sbjct: 1 GAMAFEDRDPTQFEERHLKFLQQ--LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE 58
Query: 351 QGDAEFCNEVEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSF 410
+ +F E+EI+ +L+H N+V +G C G L+ +Y+P G++ D+L
Sbjct: 59 EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK----LIMEYLPYGSLRDYL---- 110
Query: 411 NDGSGVAKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVAD 470
K + + + KG+ YL G K I HRD+ NIL++ + R ++ D
Sbjct: 111 ----QKHKERIDHIKLLQYTSQICKGMEYL--GTKRYI-HRDLATRNILVENENRVKIGD 163
Query: 471 FGLAKQSREGQSHLTTRVAGTHG--YLAPEYALYGQLTEKSDVYSFGVVILEI 521
FGL K + + + G + APE + + SDV+SFGVV+ E+
Sbjct: 164 FGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 216
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 105/215 (48%), Gaps = 24/215 (11%)
Query: 314 KFSQKNFIGRGGFGLVYK---GILQD--GTTVAVKKVIESDFQGDAEFCNEVEIISNLKH 368
KF Q+ +G+G FG V LQD G VAVKK+ S + +F E+EI+ +L+H
Sbjct: 13 KFLQQ--LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 70
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKN 428
N+V +G C G L+ +Y+P G++ D+L K + +
Sbjct: 71 DNIVKYKGVCYSAGRRNLK----LIMEYLPYGSLRDYL--------QKHKERIDHIKLLQ 118
Query: 429 IILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRV 488
+ KG+ YL G K I HRD+ NIL++ + R ++ DFGL K + + +
Sbjct: 119 YTSQICKGMEYL--GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKE 175
Query: 489 AGTHG--YLAPEYALYGQLTEKSDVYSFGVVILEI 521
G + APE + + SDV+SFGVV+ E+
Sbjct: 176 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 210
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 109/237 (45%), Gaps = 38/237 (16%)
Query: 307 DLERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNL 366
++ER TD + K+ +G G +G VY+G+ + + K ++ D EF E ++ +
Sbjct: 14 EMER-TD-ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 71
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQR 426
KH NLV L G C R Y++ ++M GN+ D+L R +
Sbjct: 72 KHPNLVQLLGVCT------REPPFYIITEFMTYGNLLDYL------------RECNRQEV 113
Query: 427 KNIIL-----DVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
++L ++ + YL K HRD+ A N L+ + +VADFGL SR
Sbjct: 114 NAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGL---SRLMT 167
Query: 482 SHLTTRVAGTH---GYLAPEYALYGQLTEKSDVYSFGVVILEI----MCGRKALDLS 531
T AG + APE Y + + KSDV++FGV++ EI M +DLS
Sbjct: 168 GDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 224
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 105/215 (48%), Gaps = 24/215 (11%)
Query: 314 KFSQKNFIGRGGFGLVYK---GILQD--GTTVAVKKVIESDFQGDAEFCNEVEIISNLKH 368
KF Q+ +G+G FG V LQD G VAVKK+ S + +F E+EI+ +L+H
Sbjct: 12 KFLQQ--LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 69
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKN 428
N+V +G C G L+ +Y+P G++ D+L K + +
Sbjct: 70 DNIVKYKGVCYSAGRRNLK----LIMEYLPYGSLRDYL--------QKHKERIDHIKLLQ 117
Query: 429 IILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRV 488
+ KG+ YL G K I HRD+ NIL++ + R ++ DFGL K + + +
Sbjct: 118 YTSQICKGMEYL--GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE 174
Query: 489 AGTHG--YLAPEYALYGQLTEKSDVYSFGVVILEI 521
G + APE + + SDV+SFGVV+ E+
Sbjct: 175 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 209
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 109/237 (45%), Gaps = 38/237 (16%)
Query: 307 DLERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNL 366
++ER TD + K+ +G G +G VY+G+ + + K ++ D EF E ++ +
Sbjct: 14 EMER-TD-ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 71
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQR 426
KH NLV L G C R Y++ ++M GN+ D+L R +
Sbjct: 72 KHPNLVQLLGVCT------REPPFYIIIEFMTYGNLLDYL------------RECNRQEV 113
Query: 427 KNIIL-----DVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
++L ++ + YL K HRD+ A N L+ + +VADFGL SR
Sbjct: 114 NAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGL---SRLMT 167
Query: 482 SHLTTRVAGTH---GYLAPEYALYGQLTEKSDVYSFGVVILEI----MCGRKALDLS 531
T AG + APE Y + + KSDV++FGV++ EI M +DLS
Sbjct: 168 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 224
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 105/215 (48%), Gaps = 24/215 (11%)
Query: 314 KFSQKNFIGRGGFGLVYK---GILQD--GTTVAVKKVIESDFQGDAEFCNEVEIISNLKH 368
KF Q+ +G+G FG V LQD G VAVKK+ S + +F E+EI+ +L+H
Sbjct: 44 KFLQQ--LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 101
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKN 428
N+V +G C G L+ +Y+P G++ D+L K + +
Sbjct: 102 DNIVKYKGVCYSAGRRNLK----LIMEYLPYGSLRDYL--------QKHKERIDHIKLLQ 149
Query: 429 IILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRV 488
+ KG+ YL G K I HRD+ NIL++ + R ++ DFGL K + + +
Sbjct: 150 YTSQICKGMEYL--GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE 206
Query: 489 AGTHG--YLAPEYALYGQLTEKSDVYSFGVVILEI 521
G + APE + + SDV+SFGVV+ E+
Sbjct: 207 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 241
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 109/237 (45%), Gaps = 38/237 (16%)
Query: 307 DLERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNL 366
++ER TD + K+ +G G +G VY+G+ + + K ++ D EF E ++ +
Sbjct: 10 EMER-TD-ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 67
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQR 426
KH NLV L G C R Y++ ++M GN+ D+L R +
Sbjct: 68 KHPNLVQLLGVCT------REPPFYIIIEFMTYGNLLDYL------------RECNRQEV 109
Query: 427 KNIIL-----DVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
++L ++ + YL K HRD+ A N L+ + +VADFGL SR
Sbjct: 110 NAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGL---SRLMT 163
Query: 482 SHLTTRVAGTH---GYLAPEYALYGQLTEKSDVYSFGVVILEI----MCGRKALDLS 531
T AG + APE Y + + KSDV++FGV++ EI M +DLS
Sbjct: 164 GDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 220
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 109/237 (45%), Gaps = 38/237 (16%)
Query: 307 DLERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNL 366
++ER TD + K+ +G G +G VY+G+ + + K ++ D EF E ++ +
Sbjct: 14 EMER-TD-ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 71
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQR 426
KH NLV L G C R Y++ ++M GN+ D+L R +
Sbjct: 72 KHPNLVQLLGVCT------REPPFYIITEFMTYGNLLDYL------------RECNRQEV 113
Query: 427 KNIIL-----DVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
++L ++ + YL K HRD+ A N L+ + +VADFGL SR
Sbjct: 114 NAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGL---SRLMT 167
Query: 482 SHLTTRVAGTH---GYLAPEYALYGQLTEKSDVYSFGVVILEI----MCGRKALDLS 531
T AG + APE Y + + KSDV++FGV++ EI M +DLS
Sbjct: 168 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 224
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 105/215 (48%), Gaps = 24/215 (11%)
Query: 314 KFSQKNFIGRGGFGLVYK---GILQD--GTTVAVKKVIESDFQGDAEFCNEVEIISNLKH 368
KF Q+ +G+G FG V LQD G VAVKK+ S + +F E+EI+ +L+H
Sbjct: 13 KFLQQ--LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 70
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKN 428
N+V +G C G L+ +Y+P G++ D+L K + +
Sbjct: 71 DNIVKYKGVCYSAGRRNLK----LIMEYLPYGSLRDYL--------QKHKERIDHIKLLQ 118
Query: 429 IILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRV 488
+ KG+ YL G K I HRD+ NIL++ + R ++ DFGL K + + +
Sbjct: 119 YTSQICKGMEYL--GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE 175
Query: 489 AGTHG--YLAPEYALYGQLTEKSDVYSFGVVILEI 521
G + APE + + SDV+SFGVV+ E+
Sbjct: 176 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 210
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 104/223 (46%), Gaps = 34/223 (15%)
Query: 307 DLERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNL 366
++ER TD + K+ +G G +G VY+G+ + + K ++ D EF E ++ +
Sbjct: 7 EMER-TD-ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 64
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQR 426
KH NLV L G C R Y++ ++M GN+ D+L R +
Sbjct: 65 KHPNLVQLLGVCT------REPPFYIIIEFMTYGNLLDYL------------RECNRQEV 106
Query: 427 KNIIL-----DVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
++L ++ + YL K HRD+ A N L+ + +VADFGL SR
Sbjct: 107 SAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGL---SRLMT 160
Query: 482 SHLTTRVAGTH---GYLAPEYALYGQLTEKSDVYSFGVVILEI 521
T AG + APE Y + + KSDV++FGV++ EI
Sbjct: 161 GDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 203
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 109/237 (45%), Gaps = 38/237 (16%)
Query: 307 DLERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNL 366
++ER TD + K+ +G G +G VY+G+ + + K ++ D EF E ++ +
Sbjct: 10 EMER-TD-ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 67
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQR 426
KH NLV L G C R Y++ ++M GN+ D+L R +
Sbjct: 68 KHPNLVQLLGVCT------REPPFYIITEFMTYGNLLDYL------------RECNRQEV 109
Query: 427 KNIIL-----DVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
++L ++ + YL K HRD+ A N L+ + +VADFGL SR
Sbjct: 110 NAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGL---SRLMT 163
Query: 482 SHLTTRVAGTH---GYLAPEYALYGQLTEKSDVYSFGVVILEI----MCGRKALDLS 531
T AG + APE Y + + KSDV++FGV++ EI M +DLS
Sbjct: 164 GDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 220
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 105/215 (48%), Gaps = 24/215 (11%)
Query: 314 KFSQKNFIGRGGFGLVYK---GILQD--GTTVAVKKVIESDFQGDAEFCNEVEIISNLKH 368
KF Q+ +G+G FG V LQD G VAVKK+ S + +F E+EI+ +L+H
Sbjct: 13 KFLQQ--LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 70
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKN 428
N+V +G C G L+ +Y+P G++ D+L K + +
Sbjct: 71 DNIVKYKGVCYSAGRRNLK----LIMEYLPYGSLRDYL--------QKHKERIDHIKLLQ 118
Query: 429 IILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRV 488
+ KG+ YL G K I HRD+ NIL++ + R ++ DFGL K + + +
Sbjct: 119 YTSQICKGMEYL--GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE 175
Query: 489 AGTHG--YLAPEYALYGQLTEKSDVYSFGVVILEI 521
G + APE + + SDV+SFGVV+ E+
Sbjct: 176 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 210
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 110/220 (50%), Gaps = 29/220 (13%)
Query: 318 KNFIGRGGFGLVYKG-ILQDGTTV--AVKKVIESDFQGD-AEFCNEVEIISNLKHR-NLV 372
++ IG G FG V K I +DG + A+K++ E + D +F E+E++ L H N++
Sbjct: 30 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 89
Query: 373 PLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLF--------PSFNDGSGVAKRPLTWP 424
L G C E YL +Y P+GN+ D L P+F + A L+
Sbjct: 90 NLLGAC------EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAS-TLSSQ 142
Query: 425 QRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHL 484
Q + DVA+G+ YL + HRD+ A NIL+ + A++ADFGL++ GQ
Sbjct: 143 QLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSR----GQEVY 195
Query: 485 TTRVAGTH--GYLAPEYALYGQLTEKSDVYSFGVVILEIM 522
+ G ++A E Y T SDV+S+GV++ EI+
Sbjct: 196 VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIV 235
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 109/237 (45%), Gaps = 38/237 (16%)
Query: 307 DLERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNL 366
++ER TD + K+ +G G +G VY+G+ + + K ++ D EF E ++ +
Sbjct: 13 EMER-TD-ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 70
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQR 426
KH NLV L G C R Y++ ++M GN+ D+L R +
Sbjct: 71 KHPNLVQLLGVCT------REPPFYIITEFMTYGNLLDYL------------RECNRQEV 112
Query: 427 KNIIL-----DVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
++L ++ + YL K HRD+ A N L+ + +VADFGL SR
Sbjct: 113 NAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGL---SRLMT 166
Query: 482 SHLTTRVAGTH---GYLAPEYALYGQLTEKSDVYSFGVVILEI----MCGRKALDLS 531
T AG + APE Y + + KSDV++FGV++ EI M +DLS
Sbjct: 167 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 223
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 109/237 (45%), Gaps = 38/237 (16%)
Query: 307 DLERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNL 366
++ER TD + K+ +G G +G VY+G+ + + K ++ D EF E ++ +
Sbjct: 9 EMER-TD-ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 66
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQR 426
KH NLV L G C R Y++ ++M GN+ D+L R +
Sbjct: 67 KHPNLVQLLGVCT------REPPFYIITEFMTYGNLLDYL------------RECNRQEV 108
Query: 427 KNIIL-----DVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
++L ++ + YL K HRD+ A N L+ + +VADFGL SR
Sbjct: 109 NAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGL---SRLMT 162
Query: 482 SHLTTRVAGTH---GYLAPEYALYGQLTEKSDVYSFGVVILEI----MCGRKALDLS 531
T AG + APE Y + + KSDV++FGV++ EI M +DLS
Sbjct: 163 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 219
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 110/220 (50%), Gaps = 29/220 (13%)
Query: 318 KNFIGRGGFGLVYKG-ILQDGTTV--AVKKVIESDFQGD-AEFCNEVEIISNLKHR-NLV 372
++ IG G FG V K I +DG + A+K++ E + D +F E+E++ L H N++
Sbjct: 20 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 79
Query: 373 PLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLF--------PSFNDGSGVAKRPLTWP 424
L G C E YL +Y P+GN+ D L P+F + A L+
Sbjct: 80 NLLGAC------EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAS-TLSSQ 132
Query: 425 QRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHL 484
Q + DVA+G+ YL + HRD+ A NIL+ + A++ADFGL++ GQ
Sbjct: 133 QLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSR----GQEVY 185
Query: 485 TTRVAGTH--GYLAPEYALYGQLTEKSDVYSFGVVILEIM 522
+ G ++A E Y T SDV+S+GV++ EI+
Sbjct: 186 VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIV 225
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 105/215 (48%), Gaps = 24/215 (11%)
Query: 314 KFSQKNFIGRGGFGLVYK---GILQD--GTTVAVKKVIESDFQGDAEFCNEVEIISNLKH 368
KF Q+ +G+G FG V LQD G VAVKK+ S + +F E+EI+ +L+H
Sbjct: 17 KFLQQ--LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 74
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKN 428
N+V +G C G L+ +Y+P G++ D+L K + +
Sbjct: 75 DNIVKYKGVCYSAGRRNLK----LIMEYLPYGSLRDYL--------QKHKERIDHIKLLQ 122
Query: 429 IILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRV 488
+ KG+ YL G K I HRD+ NIL++ + R ++ DFGL K + + +
Sbjct: 123 YTSQICKGMEYL--GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE 179
Query: 489 AGTHG--YLAPEYALYGQLTEKSDVYSFGVVILEI 521
G + APE + + SDV+SFGVV+ E+
Sbjct: 180 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 214
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 109/237 (45%), Gaps = 38/237 (16%)
Query: 307 DLERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNL 366
++ER TD + K+ +G G +G VY+G+ + + K ++ D EF E ++ +
Sbjct: 11 EMER-TD-ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 68
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQR 426
KH NLV L G C R Y++ ++M GN+ D+L R +
Sbjct: 69 KHPNLVQLLGVCT------REPPFYIITEFMTYGNLLDYL------------RECNRQEV 110
Query: 427 KNIIL-----DVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
++L ++ + YL K HRD+ A N L+ + +VADFGL SR
Sbjct: 111 NAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGL---SRLMT 164
Query: 482 SHLTTRVAGTH---GYLAPEYALYGQLTEKSDVYSFGVVILEI----MCGRKALDLS 531
T AG + APE Y + + KSDV++FGV++ EI M +DLS
Sbjct: 165 GDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 221
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 105/215 (48%), Gaps = 24/215 (11%)
Query: 314 KFSQKNFIGRGGFGLVYK---GILQD--GTTVAVKKVIESDFQGDAEFCNEVEIISNLKH 368
KF Q+ +G+G FG V LQD G VAVKK+ S + +F E+EI+ +L+H
Sbjct: 11 KFLQQ--LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 68
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKN 428
N+V +G C G L+ +Y+P G++ D+L K + +
Sbjct: 69 DNIVKYKGVCYSAGRRNLK----LIMEYLPYGSLRDYL--------QKHKERIDHIKLLQ 116
Query: 429 IILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRV 488
+ KG+ YL G K I HRD+ NIL++ + R ++ DFGL K + + +
Sbjct: 117 YTSQICKGMEYL--GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE 173
Query: 489 AGTHG--YLAPEYALYGQLTEKSDVYSFGVVILEI 521
G + APE + + SDV+SFGVV+ E+
Sbjct: 174 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 208
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 107/215 (49%), Gaps = 24/215 (11%)
Query: 314 KFSQKNFIGRGGFGLVYK---GILQD--GTTVAVKKVIESDFQGDAEFCNEVEIISNLKH 368
KF Q+ +G+G FG V LQD G VAVKK+ S + +F E+EI+ +L+H
Sbjct: 16 KFLQQ--LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 73
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKN 428
N+V +G C G L+ +Y+P G++ D+L A+R + +
Sbjct: 74 DNIVKYKGVCYSAGRRNLK----LIMEYLPYGSLRDYL-------QAHAER-IDHIKLLQ 121
Query: 429 IILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRV 488
+ KG+ YL G K I HRD+ NIL++ + R ++ DFGL K + + +
Sbjct: 122 YTSQICKGMEYL--GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE 178
Query: 489 AGTHG--YLAPEYALYGQLTEKSDVYSFGVVILEI 521
G + APE + + SDV+SFGVV+ E+
Sbjct: 179 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 213
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 109/237 (45%), Gaps = 38/237 (16%)
Query: 307 DLERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNL 366
++ER TD + K+ +G G +G VY+G+ + + K ++ D EF E ++ +
Sbjct: 9 EMER-TD-ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 66
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQR 426
KH NLV L G C R Y++ ++M GN+ D+L R +
Sbjct: 67 KHPNLVQLLGVCT------REPPFYIITEFMTYGNLLDYL------------RECNRQEV 108
Query: 427 KNIIL-----DVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
++L ++ + YL K HRD+ A N L+ + +VADFGL SR
Sbjct: 109 NAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGL---SRLMT 162
Query: 482 SHLTTRVAGTH---GYLAPEYALYGQLTEKSDVYSFGVVILEI----MCGRKALDLS 531
T AG + APE Y + + KSDV++FGV++ EI M +DLS
Sbjct: 163 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 219
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 109/237 (45%), Gaps = 38/237 (16%)
Query: 307 DLERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNL 366
++ER TD + K+ +G G +G VY+G+ + + K ++ D EF E ++ +
Sbjct: 9 EMER-TD-ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 66
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQR 426
KH NLV L G C R Y++ ++M GN+ D+L R +
Sbjct: 67 KHPNLVQLLGVCT------REPPFYIIIEFMTYGNLLDYL------------RECNRQEV 108
Query: 427 KNIIL-----DVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
++L ++ + YL K HRD+ A N L+ + +VADFGL SR
Sbjct: 109 SAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGL---SRLMT 162
Query: 482 SHLTTRVAGTH---GYLAPEYALYGQLTEKSDVYSFGVVILEI----MCGRKALDLS 531
T AG + APE Y + + KSDV++FGV++ EI M +DLS
Sbjct: 163 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 219
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 105/215 (48%), Gaps = 24/215 (11%)
Query: 314 KFSQKNFIGRGGFGLVYK---GILQD--GTTVAVKKVIESDFQGDAEFCNEVEIISNLKH 368
KF Q+ +G+G FG V LQD G VAVKK+ S + +F E+EI+ +L+H
Sbjct: 31 KFLQQ--LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 88
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKN 428
N+V +G C G L+ +Y+P G++ D+L K + +
Sbjct: 89 DNIVKYKGVCYSAGRRNLK----LIMEYLPYGSLRDYL--------QKHKERIDHIKLLQ 136
Query: 429 IILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRV 488
+ KG+ YL G K I HRD+ NIL++ + R ++ DFGL K + + +
Sbjct: 137 YTSQICKGMEYL--GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE 193
Query: 489 AGTHG--YLAPEYALYGQLTEKSDVYSFGVVILEI 521
G + APE + + SDV+SFGVV+ E+
Sbjct: 194 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 228
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 105/215 (48%), Gaps = 24/215 (11%)
Query: 314 KFSQKNFIGRGGFGLVYK---GILQD--GTTVAVKKVIESDFQGDAEFCNEVEIISNLKH 368
KF Q+ +G+G FG V LQD G VAVKK+ S + +F E+EI+ +L+H
Sbjct: 18 KFLQQ--LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 75
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKN 428
N+V +G C G L+ +Y+P G++ D+L K + +
Sbjct: 76 DNIVKYKGVCYSAGRRNLK----LIMEYLPYGSLRDYL--------QKHKERIDHIKLLQ 123
Query: 429 IILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRV 488
+ KG+ YL G K I HRD+ NIL++ + R ++ DFGL K + + +
Sbjct: 124 YTSQICKGMEYL--GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE 180
Query: 489 AGTHG--YLAPEYALYGQLTEKSDVYSFGVVILEI 521
G + APE + + SDV+SFGVV+ E+
Sbjct: 181 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 215
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 105/215 (48%), Gaps = 24/215 (11%)
Query: 314 KFSQKNFIGRGGFGLVYK---GILQD--GTTVAVKKVIESDFQGDAEFCNEVEIISNLKH 368
KF Q+ +G+G FG V LQD G VAVKK+ S + +F E+EI+ +L+H
Sbjct: 16 KFLQQ--LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 73
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKN 428
N+V +G C G L+ +Y+P G++ D+L K + +
Sbjct: 74 DNIVKYKGVCYSAGRRNLK----LIMEYLPYGSLRDYL--------QKHKERIDHIKLLQ 121
Query: 429 IILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRV 488
+ KG+ YL G K I HRD+ NIL++ + R ++ DFGL K + + +
Sbjct: 122 YTSQICKGMEYL--GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE 178
Query: 489 AGTHG--YLAPEYALYGQLTEKSDVYSFGVVILEI 521
G + APE + + SDV+SFGVV+ E+
Sbjct: 179 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 213
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 105/215 (48%), Gaps = 24/215 (11%)
Query: 314 KFSQKNFIGRGGFGLVYK---GILQD--GTTVAVKKVIESDFQGDAEFCNEVEIISNLKH 368
KF Q+ +G+G FG V LQD G VAVKK+ S + +F E+EI+ +L+H
Sbjct: 20 KFLQQ--LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 77
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKN 428
N+V +G C G L+ +Y+P G++ D+L K + +
Sbjct: 78 DNIVKYKGVCYSAGRRNLK----LIMEYLPYGSLRDYL--------QKHKERIDHIKLLQ 125
Query: 429 IILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRV 488
+ KG+ YL G K I HRD+ NIL++ + R ++ DFGL K + + +
Sbjct: 126 YTSQICKGMEYL--GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE 182
Query: 489 AGTHG--YLAPEYALYGQLTEKSDVYSFGVVILEI 521
G + APE + + SDV+SFGVV+ E+
Sbjct: 183 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 217
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 105/217 (48%), Gaps = 20/217 (9%)
Query: 315 FSQKNFIGRGGFGLVYKGILQD-GTTVAVKKVIESDFQGDAE-FCNEVEIISNLKHRNLV 372
+ K +G GGFG V + I QD G VA+K+ + + E +C E++I+ L H N+V
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 75
Query: 373 PLRGCCVVDGDNERGSERY--LVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNII 430
R V DG + L +Y G++ +L F + G+ + P+ + ++
Sbjct: 76 SARE--VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLN-QFENCCGLKEGPI-----RTLL 127
Query: 431 LDVAKGLAYLHYGVKPAIYHRDIKATNILLD---ADMRARVADFGLAKQSREGQSHLTTR 487
D++ L YLH I HRD+K NI+L + ++ D G AK+ +G+ L T
Sbjct: 128 SDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE--LCTE 182
Query: 488 VAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
GT YLAPE + T D +SFG + E + G
Sbjct: 183 FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 219
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 109/237 (45%), Gaps = 38/237 (16%)
Query: 307 DLERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNL 366
++ER TD + K+ +G G +G VY+G+ + + K ++ D EF E ++ +
Sbjct: 22 EMER-TD-ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 79
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQR 426
KH NLV L G C R Y++ ++M GN+ D+L R +
Sbjct: 80 KHPNLVQLLGVCT------REPPFYIITEFMTYGNLLDYL------------RECNRQEV 121
Query: 427 KNIIL-----DVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
++L ++ + YL K HRD+ A N L+ + +VADFGL SR
Sbjct: 122 NAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGL---SRLMT 175
Query: 482 SHLTTRVAGTH---GYLAPEYALYGQLTEKSDVYSFGVVILEI----MCGRKALDLS 531
T AG + APE Y + + KSDV++FGV++ EI M +DLS
Sbjct: 176 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 232
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 109/237 (45%), Gaps = 38/237 (16%)
Query: 307 DLERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNL 366
++ER TD + K+ +G G +G VY+G+ + + K ++ D EF E ++ +
Sbjct: 9 EMER-TD-ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 66
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQR 426
KH NLV L G C R Y++ ++M GN+ D+L R +
Sbjct: 67 KHPNLVQLLGVCT------REPPFYIITEFMTYGNLLDYL------------RECNRQEV 108
Query: 427 KNIIL-----DVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
++L ++ + YL K HRD+ A N L+ + +VADFGL SR
Sbjct: 109 SAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGL---SRLMT 162
Query: 482 SHLTTRVAGTH---GYLAPEYALYGQLTEKSDVYSFGVVILEI----MCGRKALDLS 531
T AG + APE Y + + KSDV++FGV++ EI M +DLS
Sbjct: 163 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 219
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 109/237 (45%), Gaps = 38/237 (16%)
Query: 307 DLERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNL 366
++ER TD + K+ +G G +G VY+G+ + + K ++ D EF E ++ +
Sbjct: 14 EMER-TD-ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 71
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQR 426
KH NLV L G C R Y++ ++M GN+ D+L R +
Sbjct: 72 KHPNLVQLLGVCT------REPPFYIITEFMTYGNLLDYL------------RECNRQEV 113
Query: 427 KNIIL-----DVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
++L ++ + YL K HRD+ A N L+ + +VADFGL SR
Sbjct: 114 SAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGL---SRLMT 167
Query: 482 SHLTTRVAGTH---GYLAPEYALYGQLTEKSDVYSFGVVILEI----MCGRKALDLS 531
T AG + APE Y + + KSDV++FGV++ EI M +DLS
Sbjct: 168 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 224
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 139/331 (41%), Gaps = 58/331 (17%)
Query: 303 FKIQDLERATDKFSQKNFIGRGGFGLVYKGILQD------GTTVAVKKVIES-DFQGDAE 355
F + E + +K + +G+G FG+VY+G +D T VAVK V ES + E
Sbjct: 7 FVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE 66
Query: 356 FCNEVEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLF---PSFND 412
F NE ++ ++V L G +G +V + M +G++ +L P +
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVV------SKGQPTLVVMELMAHGDLKSYLRSLRPEAEN 120
Query: 413 GSGVAKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFG 472
G + P T + + ++A G+AYL+ HRD+ A N ++ D ++ DFG
Sbjct: 121 NPG--RPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFG 175
Query: 473 LAKQSRE-------GQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGR 525
+ + E G+ L R ++APE G T SD++SFGVV+ EI
Sbjct: 176 MTRDIYETAYYRKGGKGLLPVR------WMAPESLKDGVFTTSSDMWSFGVVLWEIT--- 226
Query: 526 KALDLSTSGSPRACLITDWVWSLVKAGKVWQALDPSLLKEDDFLSLNPKAIMERFVLVGI 585
S + P L + V V G LD P ER +
Sbjct: 227 -----SLAEQPYQGLSNEQVLKFVMDGGY---LD------------QPDNCPERVTDLMR 266
Query: 586 LCAHVMVALRPTISDALKMLEGDIEVPPLPD 616
+C +RPT + + +L+ D+ P P+
Sbjct: 267 MCWQFNPKMRPTFLEIVNLLKDDLH-PSFPE 296
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 105/215 (48%), Gaps = 24/215 (11%)
Query: 314 KFSQKNFIGRGGFGLVYK---GILQD--GTTVAVKKVIESDFQGDAEFCNEVEIISNLKH 368
KF Q+ +G+G FG V LQD G VAVKK+ S + +F E+EI+ +L+H
Sbjct: 31 KFLQQ--LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 88
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKN 428
N+V +G C G L+ +Y+P G++ D+L K + +
Sbjct: 89 DNIVKYKGVCYSAGRRNLK----LIMEYLPYGSLRDYL--------QKHKERIDHIKLLQ 136
Query: 429 IILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRV 488
+ KG+ YL G K I HRD+ NIL++ + R ++ DFGL K + + +
Sbjct: 137 YTSQICKGMEYL--GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE 193
Query: 489 AGTHG--YLAPEYALYGQLTEKSDVYSFGVVILEI 521
G + APE + + SDV+SFGVV+ E+
Sbjct: 194 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 228
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 109/237 (45%), Gaps = 38/237 (16%)
Query: 307 DLERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNL 366
++ER TD + K+ +G G +G VY+G+ + + K ++ D EF E ++ +
Sbjct: 11 EMER-TD-ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 68
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQR 426
KH NLV L G C R Y++ ++M GN+ D+L R +
Sbjct: 69 KHPNLVQLLGVCT------REPPFYIITEFMTYGNLLDYL------------RECNRQEV 110
Query: 427 KNIIL-----DVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
++L ++ + YL K HRD+ A N L+ + +VADFGL SR
Sbjct: 111 NAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGL---SRLMT 164
Query: 482 SHLTTRVAGTH---GYLAPEYALYGQLTEKSDVYSFGVVILEI----MCGRKALDLS 531
T AG + APE Y + + KSDV++FGV++ EI M +DLS
Sbjct: 165 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 221
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 105/217 (48%), Gaps = 20/217 (9%)
Query: 315 FSQKNFIGRGGFGLVYKGILQD-GTTVAVKKVIESDFQGDAE-FCNEVEIISNLKHRNLV 372
+ K +G GGFG V + I QD G VA+K+ + + E +C E++I+ L H N+V
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 76
Query: 373 PLRGCCVVDGDNERGSERY--LVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNII 430
R V DG + L +Y G++ +L F + G+ + P+ + ++
Sbjct: 77 SARE--VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLN-QFENCCGLKEGPI-----RTLL 128
Query: 431 LDVAKGLAYLHYGVKPAIYHRDIKATNILLD---ADMRARVADFGLAKQSREGQSHLTTR 487
D++ L YLH I HRD+K NI+L + ++ D G AK+ +G+ L T
Sbjct: 129 SDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE--LCTE 183
Query: 488 VAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
GT YLAPE + T D +SFG + E + G
Sbjct: 184 FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 220
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 139/331 (41%), Gaps = 58/331 (17%)
Query: 303 FKIQDLERATDKFSQKNFIGRGGFGLVYKGILQD------GTTVAVKKVIES-DFQGDAE 355
F + E + +K + +G+G FG+VY+G +D T VAVK V ES + E
Sbjct: 4 FVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE 63
Query: 356 FCNEVEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLF---PSFND 412
F NE ++ ++V L G +G +V + M +G++ +L P +
Sbjct: 64 FLNEASVMKGFTCHHVVRLLGVV------SKGQPTLVVMELMAHGDLKSYLRSLRPEAEN 117
Query: 413 GSGVAKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFG 472
G + P T + + ++A G+AYL+ HRD+ A N ++ D ++ DFG
Sbjct: 118 NPG--RPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFG 172
Query: 473 LAKQSRE-------GQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGR 525
+ + E G+ L R ++APE G T SD++SFGVV+ EI
Sbjct: 173 MTRDIXETDXXRKGGKGLLPVR------WMAPESLKDGVFTTSSDMWSFGVVLWEIT--- 223
Query: 526 KALDLSTSGSPRACLITDWVWSLVKAGKVWQALDPSLLKEDDFLSLNPKAIMERFVLVGI 585
S + P L + V V G LD P ER +
Sbjct: 224 -----SLAEQPYQGLSNEQVLKFVMDGGY---LD------------QPDNCPERVTDLMR 263
Query: 586 LCAHVMVALRPTISDALKMLEGDIEVPPLPD 616
+C +RPT + + +L+ D+ P P+
Sbjct: 264 MCWQFNPKMRPTFLEIVNLLKDDLH-PSFPE 293
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 109/237 (45%), Gaps = 38/237 (16%)
Query: 307 DLERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNL 366
++ER TD + K+ +G G +G VY+G+ + + K ++ D EF E ++ +
Sbjct: 11 EMER-TD-ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 68
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQR 426
KH NLV L G C R Y++ ++M GN+ D+L R +
Sbjct: 69 KHPNLVQLLGVCT------REPPFYIITEFMTYGNLLDYL------------RECNRQEV 110
Query: 427 KNIIL-----DVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
++L ++ + YL K HRD+ A N L+ + +VADFGL SR
Sbjct: 111 NAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGL---SRLMT 164
Query: 482 SHLTTRVAGTH---GYLAPEYALYGQLTEKSDVYSFGVVILEI----MCGRKALDLS 531
T AG + APE Y + + KSDV++FGV++ EI M +DLS
Sbjct: 165 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 221
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 109/237 (45%), Gaps = 38/237 (16%)
Query: 307 DLERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNL 366
++ER TD + K+ +G G +G VY+G+ + + K ++ D EF E ++ +
Sbjct: 14 EMER-TD-ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 71
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQR 426
KH NLV L G C R Y++ ++M GN+ D+L R +
Sbjct: 72 KHPNLVQLLGVCT------REPPFYIITEFMTYGNLLDYL------------RECNRQEV 113
Query: 427 KNIIL-----DVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
++L ++ + YL K HRD+ A N L+ + +VADFGL SR
Sbjct: 114 NAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGL---SRLMT 167
Query: 482 SHLTTRVAGTH---GYLAPEYALYGQLTEKSDVYSFGVVILEI----MCGRKALDLS 531
T AG + APE Y + + KSDV++FGV++ EI M +DLS
Sbjct: 168 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 224
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 139/331 (41%), Gaps = 58/331 (17%)
Query: 303 FKIQDLERATDKFSQKNFIGRGGFGLVYKGILQD------GTTVAVKKVIES-DFQGDAE 355
F + E + +K + +G+G FG+VY+G +D T VAVK V ES + E
Sbjct: 7 FVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE 66
Query: 356 FCNEVEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLF---PSFND 412
F NE ++ ++V L G +G +V + M +G++ +L P +
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVV------SKGQPTLVVMELMAHGDLKSYLRSLRPEAEN 120
Query: 413 GSGVAKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFG 472
G + P T + + ++A G+AYL+ HRD+ A N ++ D ++ DFG
Sbjct: 121 NPG--RPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFG 175
Query: 473 LAKQSRE-------GQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGR 525
+ + E G+ L R ++APE G T SD++SFGVV+ EI
Sbjct: 176 MTRDIXETDXXRKGGKGLLPVR------WMAPESLKDGVFTTSSDMWSFGVVLWEIT--- 226
Query: 526 KALDLSTSGSPRACLITDWVWSLVKAGKVWQALDPSLLKEDDFLSLNPKAIMERFVLVGI 585
S + P L + V V G LD P ER +
Sbjct: 227 -----SLAEQPYQGLSNEQVLKFVMDGGY---LD------------QPDNCPERVTDLMR 266
Query: 586 LCAHVMVALRPTISDALKMLEGDIEVPPLPD 616
+C +RPT + + +L+ D+ P P+
Sbjct: 267 MCWQFNPKMRPTFLEIVNLLKDDLH-PSFPE 296
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 109/237 (45%), Gaps = 38/237 (16%)
Query: 307 DLERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNL 366
++ER TD + K+ +G G +G VY+G+ + + K ++ D EF E ++ +
Sbjct: 9 EMER-TD-ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 66
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQR 426
KH NLV L G C R Y++ ++M GN+ D+L R +
Sbjct: 67 KHPNLVQLLGVCT------REPPFYIIIEFMTYGNLLDYL------------RECNRQEV 108
Query: 427 KNIIL-----DVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
++L ++ + YL K HRD+ A N L+ + +VADFGL SR
Sbjct: 109 SAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGL---SRLMT 162
Query: 482 SHLTTRVAGTH---GYLAPEYALYGQLTEKSDVYSFGVVILEI----MCGRKALDLS 531
T AG + APE Y + + KSDV++FGV++ EI M +DLS
Sbjct: 163 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 219
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 139/331 (41%), Gaps = 58/331 (17%)
Query: 303 FKIQDLERATDKFSQKNFIGRGGFGLVYKGILQD------GTTVAVKKVIES-DFQGDAE 355
F + E + +K + +G+G FG+VY+G +D T VAVK V ES + E
Sbjct: 7 FVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE 66
Query: 356 FCNEVEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLF---PSFND 412
F NE ++ ++V L G +G +V + M +G++ +L P +
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVV------SKGQPTLVVMELMAHGDLKSYLRSLRPEAEN 120
Query: 413 GSGVAKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFG 472
G + P T + + ++A G+AYL+ HRD+ A N ++ D ++ DFG
Sbjct: 121 NPG--RPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFG 175
Query: 473 LAKQSRE-------GQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGR 525
+ + E G+ L R ++APE G T SD++SFGVV+ EI
Sbjct: 176 MTRDIYETDYYRKGGKGLLPVR------WMAPESLKDGVFTTSSDMWSFGVVLWEIT--- 226
Query: 526 KALDLSTSGSPRACLITDWVWSLVKAGKVWQALDPSLLKEDDFLSLNPKAIMERFVLVGI 585
S + P L + V V G LD P ER +
Sbjct: 227 -----SLAEQPYQGLSNEQVLKFVMDGGY---LD------------QPDNCPERVTDLMR 266
Query: 586 LCAHVMVALRPTISDALKMLEGDIEVPPLPD 616
+C +RPT + + +L+ D+ P P+
Sbjct: 267 MCWQFNPKMRPTFLEIVNLLKDDLH-PSFPE 296
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 109/237 (45%), Gaps = 38/237 (16%)
Query: 307 DLERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNL 366
++ER TD + K+ +G G +G VY+G+ + + K ++ D EF E ++ +
Sbjct: 9 EMER-TD-ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 66
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQR 426
KH NLV L G C R Y++ ++M GN+ D+L R +
Sbjct: 67 KHPNLVQLLGVCT------REPPFYIITEFMTYGNLLDYL------------RECNRQEV 108
Query: 427 KNIIL-----DVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
++L ++ + YL K HRD+ A N L+ + +VADFGL SR
Sbjct: 109 SAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGL---SRLMT 162
Query: 482 SHLTTRVAGTH---GYLAPEYALYGQLTEKSDVYSFGVVILEI----MCGRKALDLS 531
T AG + APE Y + + KSDV++FGV++ EI M +DLS
Sbjct: 163 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 219
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 106/215 (49%), Gaps = 24/215 (11%)
Query: 314 KFSQKNFIGRGGFGLVYK---GILQD--GTTVAVKKVIESDFQGDAEFCNEVEIISNLKH 368
KF Q+ +G+G FG V LQD G VAVKK+ S + +F E+EI+ +L+H
Sbjct: 14 KFLQQ--LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 71
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKN 428
N+V +G C G L+ +Y+P G++ D+L K + +
Sbjct: 72 DNIVKYKGVCYSAGRRNLK----LIMEYLPYGSLRDYL--------QKHKERIDHIKLLQ 119
Query: 429 IILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRV 488
+ KG+ YL G K I HR++ NIL++ + R ++ DFGL K + + + +
Sbjct: 120 YTSQICKGMEYL--GTKRYI-HRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKE 176
Query: 489 AGTHG--YLAPEYALYGQLTEKSDVYSFGVVILEI 521
G + APE + + SDV+SFGVV+ E+
Sbjct: 177 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 211
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 108/219 (49%), Gaps = 34/219 (15%)
Query: 307 DLERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNL 366
++ R + K +K +G G FG V+ T VAVK + +A F E ++ L
Sbjct: 178 EIPRESLKLEKK--LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA-FLAEANVMKTL 234
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQR 426
+H LV L + Y++ ++M G++ D L ++GS K+PL P+
Sbjct: 235 QHDKLVKLHAVVTKE-------PIYIITEFMAKGSLLDFL--KSDEGS---KQPL--PKL 280
Query: 427 KNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTT 486
+ +A+G+A++ + HRD++A NIL+ A + ++ADFGLA
Sbjct: 281 IDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLA------------ 325
Query: 487 RVAGTH--GYLAPEYALYGQLTEKSDVYSFGVVILEIMC 523
RV + APE +G T KSDV+SFG++++EI+
Sbjct: 326 RVGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVT 364
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 111/232 (47%), Gaps = 36/232 (15%)
Query: 308 LERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVI----ESDFQGDAEFCNEVEII 363
LE + + + IG GGFG VY+ G VAVK E Q E ++
Sbjct: 2 LEIDFAELTLEEIIGIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLF 60
Query: 364 SNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTW 423
+ LKH N++ LRG C+ + LV ++ G ++ L G + L
Sbjct: 61 AMLKHPNIIALRGVCL------KEPNLCLVMEFARGGPLNRVL-----SGKRIPPDILV- 108
Query: 424 PQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILL-----DADMR---ARVADFGLAK 475
N + +A+G+ YLH I HRD+K++NIL+ + D+ ++ DFGLA+
Sbjct: 109 ----NWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR 164
Query: 476 QSREGQSHLTTRV--AGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGR 525
+ H TT++ AG + ++APE ++ SDV+S+GV++ E++ G
Sbjct: 165 EW-----HRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGE 211
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 104/223 (46%), Gaps = 34/223 (15%)
Query: 307 DLERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNL 366
++ER TD + K+ +G G +G VY+G+ + + K ++ D EF E ++ +
Sbjct: 7 EMER-TD-ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 64
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQR 426
KH NLV L G C R Y++ ++M GN+ D+L R +
Sbjct: 65 KHPNLVQLLGVCT------REPPFYIITEFMTYGNLLDYL------------RECNRQEV 106
Query: 427 KNIIL-----DVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
++L ++ + YL K HRD+ A N L+ + +VADFGL SR
Sbjct: 107 SAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGL---SRLMT 160
Query: 482 SHLTTRVAGTH---GYLAPEYALYGQLTEKSDVYSFGVVILEI 521
T AG + APE Y + + KSDV++FGV++ EI
Sbjct: 161 GDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 203
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 138/327 (42%), Gaps = 58/327 (17%)
Query: 307 DLERATDKFSQKNFIGRGGFGLVYKGILQD------GTTVAVKKVIES-DFQGDAEFCNE 359
+ E + +K + +G+G FG+VY+G +D T VAVK V ES + EF NE
Sbjct: 11 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNE 70
Query: 360 VEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLF---PSFNDGSGV 416
++ ++V L G +G +V + M +G++ +L P + G
Sbjct: 71 ASVMKGFTCHHVVRLLGVV------SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPG- 123
Query: 417 AKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQ 476
+ P T + + ++A G+AYL+ HRD+ A N ++ D ++ DFG+ +
Sbjct: 124 -RPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRD 179
Query: 477 SRE-------GQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALD 529
E G+ L R ++APE G T SD++SFGVV+ EI
Sbjct: 180 IXETDXXRKGGKGLLPVR------WMAPESLKDGVFTTSSDMWSFGVVLWEIT------- 226
Query: 530 LSTSGSPRACLITDWVWSLVKAGKVWQALDPSLLKEDDFLSLNPKAIMERFVLVGILCAH 589
S + P L + V V G LD P ER + +C
Sbjct: 227 -SLAEQPYQGLSNEQVLKFVMDGGY---LD------------QPDNCPERVTDLMRMCWQ 270
Query: 590 VMVALRPTISDALKMLEGDIEVPPLPD 616
+RPT + + +L+ D+ P P+
Sbjct: 271 FNPNMRPTFLEIVNLLKDDLH-PSFPE 296
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 102/214 (47%), Gaps = 19/214 (8%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPLRGCCVV 380
+G G FG+V G + VAVK + E D EF E + + L H LV G C
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSED-EFFQEAQTMMKLSHPKLVKFYGVC-- 72
Query: 381 DGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLAYL 440
+ Y+V +Y+ NG + ++L + G G+ L + DV +G+A+L
Sbjct: 73 ----SKEYPIYIVTEYISNGCLLNYLR---SHGKGLEPSQLL-----EMCYDVCEGMAFL 120
Query: 441 HYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGYLAPEYA 500
HRD+ A N L+D D+ +V+DFG+ + + Q + + APE
Sbjct: 121 E---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVF 177
Query: 501 LYGQLTEKSDVYSFGVVILEIMC-GRKALDLSTS 533
Y + + KSDV++FG+++ E+ G+ DL T+
Sbjct: 178 HYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTN 211
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 104/207 (50%), Gaps = 23/207 (11%)
Query: 321 IGRGGFGLVYKGILQD-GTTVAVKKV-IESDFQGDAEFCNEVEIISNLKHRNLVPLRGCC 378
+G G +G VYK I ++ G VA+K+V +ESD Q E E+ I+ ++V G
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQ---EIIKEISIMQQCDSPHVVKYYGSY 93
Query: 379 VVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLA 438
+ ++ ++V +Y G+V D + + + LT + I+ KGL
Sbjct: 94 F------KNTDLWIVMEYCGAGSVSDII--------RLRNKTLTEDEIATILQSTLKGLE 139
Query: 439 YLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGYLAPE 498
YLH+ K HRDIKA NILL+ + A++ADFG+A Q + + V GT ++APE
Sbjct: 140 YLHFMRK---IHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAK-RNXVIGTPFWMAPE 195
Query: 499 YALYGQLTEKSDVYSFGVVILEIMCGR 525
+D++S G+ +E+ G+
Sbjct: 196 VIQEIGYNCVADIWSLGITAIEMAEGK 222
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 98/209 (46%), Gaps = 22/209 (10%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPLRGCCVV 380
IG G FG VYKG V + V Q F NEV ++ +H N++ G
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST- 74
Query: 381 DGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLAYL 440
+ +V + ++ HL + + + +I A+G+ YL
Sbjct: 75 ------KPQLAIVTQWCEGSSLYHHLH--------IIETKFEMIKLIDIARQTAQGMDYL 120
Query: 441 HYGVKPAIYHRDIKATNILLDADMRARVADFGLA-KQSREGQSHLTTRVAGTHGYLAPEY 499
H +I HRD+K+ NI L D+ ++ DFGLA ++SR SH +++G+ ++APE
Sbjct: 121 H---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEV 177
Query: 500 ALY---GQLTEKSDVYSFGVVILEIMCGR 525
+ +SDVY+FG+V+ E+M G+
Sbjct: 178 IRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 137/325 (42%), Gaps = 58/325 (17%)
Query: 309 ERATDKFSQKNFIGRGGFGLVYKGILQD------GTTVAVKKVIES-DFQGDAEFCNEVE 361
E + +K + +G+G FG+VY+G +D T VAVK V ES + EF NE
Sbjct: 12 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 71
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLF---PSFNDGSGVAK 418
++ ++V L G +G +V + M +G++ +L P + G +
Sbjct: 72 VMKGFTCHHVVRLLGVV------SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPG--R 123
Query: 419 RPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSR 478
P T + + ++A G+AYL+ HRD+ A N ++ D ++ DFG+ +
Sbjct: 124 PPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIY 180
Query: 479 E-------GQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLS 531
E G+ L R ++APE G T SD++SFGVV+ EI S
Sbjct: 181 ETDYYRKGGKGLLPVR------WMAPESLKDGVFTTSSDMWSFGVVLWEIT--------S 226
Query: 532 TSGSPRACLITDWVWSLVKAGKVWQALDPSLLKEDDFLSLNPKAIMERFVLVGILCAHVM 591
+ P L + V V G LD P ER + +C
Sbjct: 227 LAEQPYQGLSNEQVLKFVMDGGY---LD------------QPDNCPERVTDLMRMCWQFN 271
Query: 592 VALRPTISDALKMLEGDIEVPPLPD 616
+RPT + + +L+ D+ P P+
Sbjct: 272 PKMRPTFLEIVNLLKDDLH-PSFPE 295
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 97/209 (46%), Gaps = 22/209 (10%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPLRGCCVV 380
IG G FG VYKG V + V Q F NEV ++ +H N++ G
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST- 74
Query: 381 DGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLAYL 440
+ +V + ++ HL + + + +I A+G+ YL
Sbjct: 75 ------APQLAIVTQWCEGSSLYHHLH--------IIETKFEMIKLIDIARQTAQGMDYL 120
Query: 441 HYGVKPAIYHRDIKATNILLDADMRARVADFGLAK-QSREGQSHLTTRVAGTHGYLAPEY 499
H +I HRD+K+ NI L D+ ++ DFGLA +SR SH +++G+ ++APE
Sbjct: 121 H---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV 177
Query: 500 ALY---GQLTEKSDVYSFGVVILEIMCGR 525
+ +SDVY+FG+V+ E+M G+
Sbjct: 178 IRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 106/230 (46%), Gaps = 25/230 (10%)
Query: 298 TGSIWFKIQDLERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIE--SDFQGDAE 355
T +++F+ D E F++ IG+G FG V+KGI V K+I+ +
Sbjct: 15 TENLYFQSMDPEEL---FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIED 71
Query: 356 FCNEVEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSG 415
E+ ++S + G + D ++ +++ +Y+ G+ D L P
Sbjct: 72 IQQEITVLSQCDSPYVTKYYGSYLKD------TKLWIIMEYLGGGSALDLLEPG------ 119
Query: 416 VAKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAK 475
PL Q I+ ++ KGL YLH K HRDIKA N+LL ++ADFG+A
Sbjct: 120 ----PLDETQIATILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAG 172
Query: 476 QSREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGR 525
Q + Q T V GT ++APE K+D++S G+ +E+ G
Sbjct: 173 QLTDTQIKRNTFV-GTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 221
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 98/209 (46%), Gaps = 22/209 (10%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPLRGCCVV 380
IG G FG VYKG V + V Q F NEV ++ +H N++ G
Sbjct: 36 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST- 94
Query: 381 DGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLAYL 440
+ +V + ++ HL + + + +I A+G+ YL
Sbjct: 95 ------KPQLAIVTQWCEGSSLYHHLH--------IIETKFEMIKLIDIARQTAQGMDYL 140
Query: 441 HYGVKPAIYHRDIKATNILLDADMRARVADFGLA-KQSREGQSHLTTRVAGTHGYLAPEY 499
H +I HRD+K+ NI L D+ ++ DFGLA ++SR SH +++G+ ++APE
Sbjct: 141 H---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEV 197
Query: 500 ALY---GQLTEKSDVYSFGVVILEIMCGR 525
+ +SDVY+FG+V+ E+M G+
Sbjct: 198 IRMQDKNPYSFQSDVYAFGIVLYELMTGQ 226
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 97/209 (46%), Gaps = 22/209 (10%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPLRGCCVV 380
IG G FG VYKG V + V Q F NEV ++ +H N++ G
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST- 90
Query: 381 DGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLAYL 440
+ +V + ++ HL S + + +I A+G+ YL
Sbjct: 91 ------APQLAIVTQWCEGSSLYHHLHAS--------ETKFEMKKLIDIARQTARGMDYL 136
Query: 441 HYGVKPAIYHRDIKATNILLDADMRARVADFGLA-KQSREGQSHLTTRVAGTHGYLAPEY 499
H +I HRD+K+ NI L D ++ DFGLA ++SR SH +++G+ ++APE
Sbjct: 137 H---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEV 193
Query: 500 ALY---GQLTEKSDVYSFGVVILEIMCGR 525
+ +SDVY+FG+V+ E+M G+
Sbjct: 194 IRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 110/220 (50%), Gaps = 29/220 (13%)
Query: 318 KNFIGRGGFGLVYKG-ILQDGTTV--AVKKVIESDFQGD-AEFCNEVEIISNLKHR-NLV 372
++ IG G FG V K I +DG + A+K++ E + D +F E+E++ L H N++
Sbjct: 27 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 86
Query: 373 PLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLF--------PSFNDGSGVAKRPLTWP 424
L G C E YL +Y P+GN+ D L P+F + A L+
Sbjct: 87 NLLGAC------EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAS-TLSSQ 139
Query: 425 QRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHL 484
Q + DVA+G+ YL + HR++ A NIL+ + A++ADFGL++ GQ
Sbjct: 140 QLLHFAADVARGMDYLS---QKQFIHRNLAARNILVGENYVAKIADFGLSR----GQEVY 192
Query: 485 TTRVAGTH--GYLAPEYALYGQLTEKSDVYSFGVVILEIM 522
+ G ++A E Y T SDV+S+GV++ EI+
Sbjct: 193 VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIV 232
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 97/209 (46%), Gaps = 22/209 (10%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPLRGCCVV 380
IG G FG VYKG V + V Q F NEV ++ +H N++ G
Sbjct: 18 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST- 76
Query: 381 DGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLAYL 440
+ +V + ++ HL + + + +I A+G+ YL
Sbjct: 77 ------KPQLAIVTQWCEGSSLYHHLH--------IIETKFEMIKLIDIARQTAQGMDYL 122
Query: 441 HYGVKPAIYHRDIKATNILLDADMRARVADFGLAK-QSREGQSHLTTRVAGTHGYLAPEY 499
H +I HRD+K+ NI L D+ ++ DFGLA +SR SH +++G+ ++APE
Sbjct: 123 H---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV 179
Query: 500 ALY---GQLTEKSDVYSFGVVILEIMCGR 525
+ +SDVY+FG+V+ E+M G+
Sbjct: 180 IRMQDKNPYSFQSDVYAFGIVLYELMTGQ 208
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 97/209 (46%), Gaps = 22/209 (10%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPLRGCCVV 380
IG G FG VYKG V + V Q F NEV ++ +H N++ G
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST- 79
Query: 381 DGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLAYL 440
+ +V + ++ HL + + + +I A+G+ YL
Sbjct: 80 ------KPQLAIVTQWCEGSSLYHHLH--------IIETKFEMIKLIDIARQTAQGMDYL 125
Query: 441 HYGVKPAIYHRDIKATNILLDADMRARVADFGLAK-QSREGQSHLTTRVAGTHGYLAPEY 499
H +I HRD+K+ NI L D+ ++ DFGLA +SR SH +++G+ ++APE
Sbjct: 126 H---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV 182
Query: 500 ALY---GQLTEKSDVYSFGVVILEIMCGR 525
+ +SDVY+FG+V+ E+M G+
Sbjct: 183 IRMQDKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 97/209 (46%), Gaps = 22/209 (10%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPLRGCCVV 380
IG G FG VYKG V + V Q F NEV ++ +H N++ G
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST- 74
Query: 381 DGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLAYL 440
+ +V + ++ HL + + + +I A+G+ YL
Sbjct: 75 ------KPQLAIVTQWCEGSSLYHHLH--------IIETKFEMIKLIDIARQTAQGMDYL 120
Query: 441 HYGVKPAIYHRDIKATNILLDADMRARVADFGLAK-QSREGQSHLTTRVAGTHGYLAPEY 499
H +I HRD+K+ NI L D+ ++ DFGLA +SR SH +++G+ ++APE
Sbjct: 121 H---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV 177
Query: 500 ALY---GQLTEKSDVYSFGVVILEIMCGR 525
+ +SDVY+FG+V+ E+M G+
Sbjct: 178 IRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 98/209 (46%), Gaps = 22/209 (10%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPLRGCCVV 380
IG G FG VYKG V + V Q F NEV ++ +H N++ G
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST- 102
Query: 381 DGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLAYL 440
+ +V + ++ HL + + + +I A+G+ YL
Sbjct: 103 ------KPQLAIVTQWCEGSSLYHHLH--------IIETKFEMIKLIDIARQTAQGMDYL 148
Query: 441 HYGVKPAIYHRDIKATNILLDADMRARVADFGLA-KQSREGQSHLTTRVAGTHGYLAPEY 499
H +I HRD+K+ NI L D+ ++ DFGLA ++SR SH +++G+ ++APE
Sbjct: 149 H---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEV 205
Query: 500 ALY---GQLTEKSDVYSFGVVILEIMCGR 525
+ +SDVY+FG+V+ E+M G+
Sbjct: 206 IRMQDKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 107/238 (44%), Gaps = 28/238 (11%)
Query: 291 RPKLRPNTGSIWFKIQDLERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDF 350
RP+ + ++ W ++E + S + IG G FG VYKG V + KV++
Sbjct: 20 RPRGQRDSSYYW----EIEASEVMLSTR--IGSGSFGTVYKGKWHGDVAVKILKVVDPTP 73
Query: 351 QGDAEFCNEVEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSF 410
+ F NEV ++ +H N++ G D +V + ++ HL
Sbjct: 74 EQFQAFRNEVAVLRKTRHVNILLFMGYMTKDN-------LAIVTQWCEGSSLYKHLH--- 123
Query: 411 NDGSGVAKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVAD 470
V + Q +I A+G+ YLH I HRD+K+ NI L + ++ D
Sbjct: 124 -----VQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGD 175
Query: 471 FGLAK-QSREGQSHLTTRVAGTHGYLAPEYALY---GQLTEKSDVYSFGVVILEIMCG 524
FGLA +SR S + G+ ++APE + +SDVYS+G+V+ E+M G
Sbjct: 176 FGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTG 233
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 97/209 (46%), Gaps = 22/209 (10%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPLRGCCVV 380
IG G FG VYKG V + V Q F NEV ++ +H N++ G
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST- 90
Query: 381 DGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLAYL 440
+ +V + ++ HL S + + +I A+G+ YL
Sbjct: 91 ------KPQLAIVTQWCEGSSLYHHLHAS--------ETKFEMKKLIDIARQTARGMDYL 136
Query: 441 HYGVKPAIYHRDIKATNILLDADMRARVADFGLA-KQSREGQSHLTTRVAGTHGYLAPEY 499
H +I HRD+K+ NI L D ++ DFGLA ++SR SH +++G+ ++APE
Sbjct: 137 H---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEV 193
Query: 500 ALY---GQLTEKSDVYSFGVVILEIMCGR 525
+ +SDVY+FG+V+ E+M G+
Sbjct: 194 IRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 97/209 (46%), Gaps = 22/209 (10%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPLRGCCVV 380
IG G FG VYKG V + V Q F NEV ++ +H N++ G
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST- 79
Query: 381 DGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLAYL 440
+ +V + ++ HL + + + +I A+G+ YL
Sbjct: 80 ------KPQLAIVTQWCEGSSLYHHLH--------IIETKFEMIKLIDIARQTAQGMDYL 125
Query: 441 HYGVKPAIYHRDIKATNILLDADMRARVADFGLAK-QSREGQSHLTTRVAGTHGYLAPEY 499
H +I HRD+K+ NI L D+ ++ DFGLA +SR SH +++G+ ++APE
Sbjct: 126 H---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV 182
Query: 500 ALY---GQLTEKSDVYSFGVVILEIMCGR 525
+ +SDVY+FG+V+ E+M G+
Sbjct: 183 IRMQDKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 125/266 (46%), Gaps = 43/266 (16%)
Query: 309 ERATDKFSQKNFIGRGGFGLVYK----GILQD----GTTVAVKKVIESDFQGD-AEFCNE 359
E DK + +G G FG V GI +D TVAVK + + + D ++ +E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 360 VEIISNL-KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLF----PSFN--- 411
+E++ + KH+N++ L G C DG Y++ +Y GN+ ++L P
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDG------PLYVIVEYASKGNLREYLRARRPPGMEYSY 144
Query: 412 DGSGVAKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADF 471
D + V + +T+ + +A+G+ YL HRD+ A N+L+ + R+ADF
Sbjct: 145 DINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADF 201
Query: 472 GLAKQSREGQSHLTTRVAGTHG-----YLAPEYALYGQLTEKSDVYSFGVVILEIMCGRK 526
GLA+ + T T+G ++APE T +SDV+SFGV++ EI
Sbjct: 202 GLARDINNIDYYKKT----TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI----- 252
Query: 527 ALDLSTSGSPRACLITDWVWSLVKAG 552
+ GSP + + ++ L+K G
Sbjct: 253 ---FTLGGSPYPGIPVEELFKLLKEG 275
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/218 (33%), Positives = 108/218 (49%), Gaps = 26/218 (11%)
Query: 315 FSQKNFIGRGGFGLVYKGILQD-GTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVP 373
++ IG G FG+VY+ L D G VA+KKV+ QG A E++I+ L H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QGKAFKNRELQIMRKLDHCNIVR 77
Query: 374 LRGCCVVDGDNERGSERYLVYDYMPNG--NVDDHLFPSFNDGSGVAKRPLTWPQRKNIIL 431
LR G+ + LV DY+P V H AK+ L K +
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY--------SRAKQTLPVIYVKLYMY 129
Query: 432 DVAKGLAYLH-YGVKPAIYHRDIKATNILLDADMRA-RVADFGLAKQSREGQSHLTTRVA 489
+ + LAY+H +G I HRDIK N+LLD D ++ DFG AKQ G+ +++
Sbjct: 130 QLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--YI 183
Query: 490 GTHGYLAPEYALYG--QLTEKSDVYSFGVVILEIMCGR 525
+ Y APE ++G T DV+S G V+ E++ G+
Sbjct: 184 CSRYYRAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/218 (33%), Positives = 108/218 (49%), Gaps = 26/218 (11%)
Query: 315 FSQKNFIGRGGFGLVYKGILQD-GTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVP 373
++ IG G FG+VY+ L D G VA+KKV+ QG A E++I+ L H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QGKAFKNRELQIMRKLDHCNIVR 77
Query: 374 LRGCCVVDGDNERGSERYLVYDYMPNG--NVDDHLFPSFNDGSGVAKRPLTWPQRKNIIL 431
LR G+ + LV DY+P V H AK+ L K +
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY--------SRAKQTLPVIYVKLYMY 129
Query: 432 DVAKGLAYLH-YGVKPAIYHRDIKATNILLDADMRA-RVADFGLAKQSREGQSHLTTRVA 489
+ + LAY+H +G I HRDIK N+LLD D ++ DFG AKQ G+ +++
Sbjct: 130 QLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--YI 183
Query: 490 GTHGYLAPEYALYG--QLTEKSDVYSFGVVILEIMCGR 525
+ Y APE ++G T DV+S G V+ E++ G+
Sbjct: 184 CSRYYRAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 97/209 (46%), Gaps = 22/209 (10%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPLRGCCVV 380
IG G FG VYKG V + V Q F NEV ++ +H N++ G
Sbjct: 43 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST- 101
Query: 381 DGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLAYL 440
+ +V + ++ HL + + + +I A+G+ YL
Sbjct: 102 ------KPQLAIVTQWCEGSSLYHHLH--------IIETKFEMIKLIDIARQTAQGMDYL 147
Query: 441 HYGVKPAIYHRDIKATNILLDADMRARVADFGLAK-QSREGQSHLTTRVAGTHGYLAPEY 499
H +I HRD+K+ NI L D+ ++ DFGLA +SR SH +++G+ ++APE
Sbjct: 148 H---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV 204
Query: 500 ALY---GQLTEKSDVYSFGVVILEIMCGR 525
+ +SDVY+FG+V+ E+M G+
Sbjct: 205 IRMQDKNPYSFQSDVYAFGIVLYELMTGQ 233
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 100/213 (46%), Gaps = 30/213 (14%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIES-----DFQGDAEFCNEVEIISNLKHRNLVPLR 375
IGRG FG VY G L D + ++S D ++F E I+ + H N++ L
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 89
Query: 376 GCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNII---LD 432
G C+ GS +V YM +G++ + + ++ P K++I L
Sbjct: 90 GICL----RSEGSP-LVVLPYMKHGDLRNFIRNETHN-----------PTVKDLIGFGLQ 133
Query: 433 VAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTH 492
VAKG+ YL HRD+ A N +LD +VADFGLA+ + + + G
Sbjct: 134 VAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK 190
Query: 493 ---GYLAPEYALYGQLTEKSDVYSFGVVILEIM 522
++A E + T KSDV+SFGV++ E+M
Sbjct: 191 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 223
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 101/204 (49%), Gaps = 28/204 (13%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPLRGCCVV 380
IG+G FG V G + G VAVK I++D A F E +++ L+H NLV L G V
Sbjct: 14 IGKGEFGDVMLGDYR-GNKVAVK-CIKNDATAQA-FLAEASVMTQLRHSNLVQLLGVIV- 69
Query: 381 DGDNERGSERYLVYDYMPNGNVDDHLFP---SFNDGSGVAKRPLTWPQRKNIILDVAKGL 437
E+G Y+V +YM G++ D+L S G + K LDV + +
Sbjct: 70 ---EEKGG-LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLK----------FSLDVCEAM 115
Query: 438 AYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGYLAP 497
YL HRD+ A N+L+ D A+V+DFGL K++ Q V T AP
Sbjct: 116 EYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----AP 168
Query: 498 EYALYGQLTEKSDVYSFGVVILEI 521
E + + KSDV+SFG+++ EI
Sbjct: 169 EALREKKFSTKSDVWSFGILLWEI 192
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/218 (33%), Positives = 108/218 (49%), Gaps = 26/218 (11%)
Query: 315 FSQKNFIGRGGFGLVYKGILQD-GTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVP 373
++ IG G FG+VY+ L D G VA+KKV+ QG A E++I+ L H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QGKAFKNRELQIMRKLDHCNIVR 77
Query: 374 LRGCCVVDGDNERGSERYLVYDYMPNG--NVDDHLFPSFNDGSGVAKRPLTWPQRKNIIL 431
LR G+ + LV DY+P V H AK+ L K +
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHY--------SRAKQTLPVIYVKLYMY 129
Query: 432 DVAKGLAYLH-YGVKPAIYHRDIKATNILLDADMRA-RVADFGLAKQSREGQSHLTTRVA 489
+ + LAY+H +G I HRDIK N+LLD D ++ DFG AKQ G+ +++
Sbjct: 130 QLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--I 183
Query: 490 GTHGYLAPEYALYG--QLTEKSDVYSFGVVILEIMCGR 525
+ Y APE ++G T DV+S G V+ E++ G+
Sbjct: 184 CSRYYRAPEL-IFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 100/213 (46%), Gaps = 30/213 (14%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIES-----DFQGDAEFCNEVEIISNLKHRNLVPLR 375
IGRG FG VY G L D + ++S D ++F E I+ + H N++ L
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 116
Query: 376 GCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNII---LD 432
G C+ GS +V YM +G++ + + ++ P K++I L
Sbjct: 117 GICL----RSEGSP-LVVLPYMKHGDLRNFIRNETHN-----------PTVKDLIGFGLQ 160
Query: 433 VAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTH 492
VAKG+ YL HRD+ A N +LD +VADFGLA+ + + + G
Sbjct: 161 VAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK 217
Query: 493 ---GYLAPEYALYGQLTEKSDVYSFGVVILEIM 522
++A E + T KSDV+SFGV++ E+M
Sbjct: 218 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 250
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 97/209 (46%), Gaps = 22/209 (10%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPLRGCCVV 380
IG G FG VYKG V + V Q F NEV ++ +H N++ G
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST- 102
Query: 381 DGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLAYL 440
+ +V + ++ HL + + + +I A+G+ YL
Sbjct: 103 ------KPQLAIVTQWCEGSSLYHHLH--------IIETKFEMIKLIDIARQTAQGMDYL 148
Query: 441 HYGVKPAIYHRDIKATNILLDADMRARVADFGLAK-QSREGQSHLTTRVAGTHGYLAPEY 499
H +I HRD+K+ NI L D+ ++ DFGLA +SR SH +++G+ ++APE
Sbjct: 149 H---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV 205
Query: 500 ALY---GQLTEKSDVYSFGVVILEIMCGR 525
+ +SDVY+FG+V+ E+M G+
Sbjct: 206 IRMQDKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 96/209 (45%), Gaps = 22/209 (10%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPLRGCCVV 380
IG G FG VYKG V + V Q F NEV ++ +H N++ G
Sbjct: 20 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST- 78
Query: 381 DGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLAYL 440
+ +V + ++ HL S + + +I A+G+ YL
Sbjct: 79 ------KPQLAIVTQWCEGSSLYHHLHAS--------ETKFEMKKLIDIARQTARGMDYL 124
Query: 441 HYGVKPAIYHRDIKATNILLDADMRARVADFGLAK-QSREGQSHLTTRVAGTHGYLAPEY 499
H +I HRD+K+ NI L D ++ DFGLA +SR SH +++G+ ++APE
Sbjct: 125 H---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV 181
Query: 500 ALY---GQLTEKSDVYSFGVVILEIMCGR 525
+ +SDVY+FG+V+ E+M G+
Sbjct: 182 IRMQDSNPYSFQSDVYAFGIVLYELMTGQ 210
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 98/201 (48%), Gaps = 22/201 (10%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPLRGCCVV 380
IG+G FG V G + G VAVK I++D A F E +++ L+H NLV L G V
Sbjct: 20 IGKGEFGDVMLGDYR-GNKVAVK-CIKNDATAQA-FLAEASVMTQLRHSNLVQLLGVIV- 75
Query: 381 DGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLAYL 440
E+G Y+V +YM G++ D+L + L LDV + + YL
Sbjct: 76 ---EEKGG-LYIVTEYMAKGSLVDYL-------RSRGRSVLGGDCLLKFSLDVCEAMEYL 124
Query: 441 HYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGYLAPEYA 500
HRD+ A N+L+ D A+V+DFGL K++ Q V T APE
Sbjct: 125 EGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEAL 177
Query: 501 LYGQLTEKSDVYSFGVVILEI 521
+ KSDV+SFG+++ EI
Sbjct: 178 REAAFSTKSDVWSFGILLWEI 198
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 99/201 (49%), Gaps = 22/201 (10%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPLRGCCVV 380
IG+G FG V G + G VAVK I++D A F E +++ L+H NLV L G V
Sbjct: 29 IGKGEFGDVMLGDYR-GNKVAVK-CIKNDATAQA-FLAEASVMTQLRHSNLVQLLGVIV- 84
Query: 381 DGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLAYL 440
E+G Y+V +YM G++ D+L + L LDV + + YL
Sbjct: 85 ---EEKGG-LYIVTEYMAKGSLVDYL-------RSRGRSVLGGDCLLKFSLDVCEAMEYL 133
Query: 441 HYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGYLAPEYA 500
HRD+ A N+L+ D A+V+DFGL K++ Q V T APE
Sbjct: 134 EGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEAL 186
Query: 501 LYGQLTEKSDVYSFGVVILEI 521
+ + KSDV+SFG+++ EI
Sbjct: 187 REKKFSTKSDVWSFGILLWEI 207
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 100/213 (46%), Gaps = 30/213 (14%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIES-----DFQGDAEFCNEVEIISNLKHRNLVPLR 375
IGRG FG VY G L D + ++S D ++F E I+ + H N++ L
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 94
Query: 376 GCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNII---LD 432
G C+ GS +V YM +G++ + + ++ P K++I L
Sbjct: 95 GICL----RSEGSP-LVVLPYMKHGDLRNFIRNETHN-----------PTVKDLIGFGLQ 138
Query: 433 VAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTH 492
VAKG+ YL HRD+ A N +LD +VADFGLA+ + + + G
Sbjct: 139 VAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK 195
Query: 493 ---GYLAPEYALYGQLTEKSDVYSFGVVILEIM 522
++A E + T KSDV+SFGV++ E+M
Sbjct: 196 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 228
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 100/213 (46%), Gaps = 30/213 (14%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIES-----DFQGDAEFCNEVEIISNLKHRNLVPLR 375
IGRG FG VY G L D + ++S D ++F E I+ + H N++ L
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 92
Query: 376 GCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNII---LD 432
G C+ GS +V YM +G++ + + ++ P K++I L
Sbjct: 93 GICL----RSEGSP-LVVLPYMKHGDLRNFIRNETHN-----------PTVKDLIGFGLQ 136
Query: 433 VAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTH 492
VAKG+ YL HRD+ A N +LD +VADFGLA+ + + + G
Sbjct: 137 VAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK 193
Query: 493 ---GYLAPEYALYGQLTEKSDVYSFGVVILEIM 522
++A E + T KSDV+SFGV++ E+M
Sbjct: 194 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 226
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 109/219 (49%), Gaps = 28/219 (12%)
Query: 315 FSQKNFIGRGGFGLVYKGILQD-GTTVAVKKVIESDFQGDAEFCN-EVEIISNLKHRNLV 372
++ IG G FG+VY+ L D G VA+KKV++ D F N E++I+ L H N+V
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 88
Query: 373 PLRGCCVVDGDNERGSERYLVYDYMPNG--NVDDHLFPSFNDGSGVAKRPLTWPQRKNII 430
LR G+ + LV DY+P V H AK+ L K +
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY--------SRAKQTLPVIYVKLYM 140
Query: 431 LDVAKGLAYLH-YGVKPAIYHRDIKATNILLDADMRA-RVADFGLAKQSREGQSHLTTRV 488
+ + LAY+H +G I HRDIK N+LLD D ++ DFG AKQ G+ +++
Sbjct: 141 YQLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-- 194
Query: 489 AGTHGYLAPEYALYG--QLTEKSDVYSFGVVILEIMCGR 525
+ Y APE ++G T DV+S G V+ E++ G+
Sbjct: 195 ICSRYYRAPEL-IFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 100/213 (46%), Gaps = 30/213 (14%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIES-----DFQGDAEFCNEVEIISNLKHRNLVPLR 375
IGRG FG VY G L D + ++S D ++F E I+ + H N++ L
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 115
Query: 376 GCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNII---LD 432
G C+ GS +V YM +G++ + + ++ P K++I L
Sbjct: 116 GICL----RSEGSP-LVVLPYMKHGDLRNFIRNETHN-----------PTVKDLIGFGLQ 159
Query: 433 VAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTH 492
VAKG+ YL HRD+ A N +LD +VADFGLA+ + + + G
Sbjct: 160 VAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK 216
Query: 493 ---GYLAPEYALYGQLTEKSDVYSFGVVILEIM 522
++A E + T KSDV+SFGV++ E+M
Sbjct: 217 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 249
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 109/219 (49%), Gaps = 28/219 (12%)
Query: 315 FSQKNFIGRGGFGLVYKGILQD-GTTVAVKKVIESDFQGDAEFCN-EVEIISNLKHRNLV 372
++ IG G FG+VY+ L D G VA+KKV++ D F N E++I+ L H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 76
Query: 373 PLRGCCVVDGDNERGSERYLVYDYMPNG--NVDDHLFPSFNDGSGVAKRPLTWPQRKNII 430
LR G+ + LV DY+P V H AK+ L K +
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY--------SRAKQTLPVIYVKLYM 128
Query: 431 LDVAKGLAYLH-YGVKPAIYHRDIKATNILLDADMRA-RVADFGLAKQSREGQSHLTTRV 488
+ + LAY+H +G I HRDIK N+LLD D ++ DFG AKQ G+ +++
Sbjct: 129 YQLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-- 182
Query: 489 AGTHGYLAPEYALYG--QLTEKSDVYSFGVVILEIMCGR 525
+ Y APE ++G T DV+S G V+ E++ G+
Sbjct: 183 ICSRYYRAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 109/237 (45%), Gaps = 38/237 (16%)
Query: 307 DLERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNL 366
++ER TD + K+ +G G +G VY+G+ + + K ++ D EF E ++ +
Sbjct: 216 EMER-TD-ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 273
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQR 426
KH NLV L G C R Y++ ++M GN+ D+L R +
Sbjct: 274 KHPNLVQLLGVCT------REPPFYIITEFMTYGNLLDYL------------RECNRQEV 315
Query: 427 KNIIL-----DVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
++L ++ + YL K HR++ A N L+ + +VADFGL SR
Sbjct: 316 SAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGL---SRLMT 369
Query: 482 SHLTTRVAGTH---GYLAPEYALYGQLTEKSDVYSFGVVILEI----MCGRKALDLS 531
T AG + APE Y + + KSDV++FGV++ EI M +DLS
Sbjct: 370 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 426
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 109/219 (49%), Gaps = 28/219 (12%)
Query: 315 FSQKNFIGRGGFGLVYKGILQD-GTTVAVKKVIESDFQGDAEFCN-EVEIISNLKHRNLV 372
++ IG G FG+VY+ L D G VA+KKV++ D F N E++I+ L H N+V
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 77
Query: 373 PLRGCCVVDGDNERGSERYLVYDYMPNG--NVDDHLFPSFNDGSGVAKRPLTWPQRKNII 430
LR G+ + LV DY+P V H AK+ L K +
Sbjct: 78 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY--------SRAKQTLPVIYVKLYM 129
Query: 431 LDVAKGLAYLH-YGVKPAIYHRDIKATNILLDADMRA-RVADFGLAKQSREGQSHLTTRV 488
+ + LAY+H +G I HRDIK N+LLD D ++ DFG AKQ G+ +++
Sbjct: 130 YQLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-- 183
Query: 489 AGTHGYLAPEYALYG--QLTEKSDVYSFGVVILEIMCGR 525
+ Y APE ++G T DV+S G V+ E++ G+
Sbjct: 184 ICSRYYRAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 138/327 (42%), Gaps = 58/327 (17%)
Query: 307 DLERATDKFSQKNFIGRGGFGLVYKGILQD------GTTVAVKKVIES-DFQGDAEFCNE 359
+ E + +K + +G+G FG+VY+G +D T VAVK V ES + EF NE
Sbjct: 11 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNE 70
Query: 360 VEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLF---PSFNDGSGV 416
++ ++V L G +G +V + M +G++ +L P + G
Sbjct: 71 ASVMKGFTCHHVVRLLGVV------SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPG- 123
Query: 417 AKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQ 476
+ P T + + ++A G+AYL+ HR++ A N ++ D ++ DFG+ +
Sbjct: 124 -RPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRD 179
Query: 477 SRE-------GQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALD 529
E G+ L R ++APE G T SD++SFGVV+ EI
Sbjct: 180 IYETDYYRKGGKGLLPVR------WMAPESLKDGVFTTSSDMWSFGVVLWEIT------- 226
Query: 530 LSTSGSPRACLITDWVWSLVKAGKVWQALDPSLLKEDDFLSLNPKAIMERFVLVGILCAH 589
S + P L + V V G LD P ER + +C
Sbjct: 227 -SLAEQPYQGLSNEQVLKFVMDGGY---LD------------QPDNCPERVTDLMRMCWQ 270
Query: 590 VMVALRPTISDALKMLEGDIEVPPLPD 616
+RPT + + +L+ D+ P P+
Sbjct: 271 FNPNMRPTFLEIVNLLKDDLH-PSFPE 296
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 100/213 (46%), Gaps = 30/213 (14%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIES-----DFQGDAEFCNEVEIISNLKHRNLVPLR 375
IGRG FG VY G L D + ++S D ++F E I+ + H N++ L
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 376 GCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNII---LD 432
G C+ GS +V YM +G++ + + ++ P K++I L
Sbjct: 96 GICL----RSEGSP-LVVLPYMKHGDLRNFIRNETHN-----------PTVKDLIGFGLQ 139
Query: 433 VAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTH 492
VAKG+ YL HRD+ A N +LD +VADFGLA+ + + + G
Sbjct: 140 VAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK 196
Query: 493 ---GYLAPEYALYGQLTEKSDVYSFGVVILEIM 522
++A E + T KSDV+SFGV++ E+M
Sbjct: 197 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 229
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 109/219 (49%), Gaps = 28/219 (12%)
Query: 315 FSQKNFIGRGGFGLVYKGILQD-GTTVAVKKVIESDFQGDAEFCN-EVEIISNLKHRNLV 372
++ IG G FG+VY+ L D G VA+KKV++ D F N E++I+ L H N+V
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 84
Query: 373 PLRGCCVVDGDNERGSERYLVYDYMPNG--NVDDHLFPSFNDGSGVAKRPLTWPQRKNII 430
LR G+ + LV DY+P V H AK+ L K +
Sbjct: 85 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY--------SRAKQTLPVIYVKLYM 136
Query: 431 LDVAKGLAYLH-YGVKPAIYHRDIKATNILLDADMRA-RVADFGLAKQSREGQSHLTTRV 488
+ + LAY+H +G I HRDIK N+LLD D ++ DFG AKQ G+ +++
Sbjct: 137 YQLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-- 190
Query: 489 AGTHGYLAPEYALYG--QLTEKSDVYSFGVVILEIMCGR 525
+ Y APE ++G T DV+S G V+ E++ G+
Sbjct: 191 ICSRYYRAPEL-IFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 109/219 (49%), Gaps = 28/219 (12%)
Query: 315 FSQKNFIGRGGFGLVYKGILQD-GTTVAVKKVIESDFQGDAEFCN-EVEIISNLKHRNLV 372
++ IG G FG+VY+ L D G VA+KKV++ D F N E++I+ L H N+V
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 110
Query: 373 PLRGCCVVDGDNERGSERYLVYDYMPNG--NVDDHLFPSFNDGSGVAKRPLTWPQRKNII 430
LR G+ + LV DY+P V H AK+ L K +
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY--------SRAKQTLPVIYVKLYM 162
Query: 431 LDVAKGLAYLH-YGVKPAIYHRDIKATNILLDADMRA-RVADFGLAKQSREGQSHLTTRV 488
+ + LAY+H +G I HRDIK N+LLD D ++ DFG AKQ G+ +++
Sbjct: 163 YQLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-- 216
Query: 489 AGTHGYLAPEYALYG--QLTEKSDVYSFGVVILEIMCGR 525
+ Y APE ++G T DV+S G V+ E++ G+
Sbjct: 217 ICSRYYRAPEL-IFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 104/225 (46%), Gaps = 24/225 (10%)
Query: 313 DKFSQKNFIGRGGFGLVYKG-ILQDGTTVAVKKVIESDFQGDA---EFCNEVEIISNLKH 368
+ F N +G+G F VY+ + G VA+K + + NEV+I LKH
Sbjct: 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKH 70
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKN 428
+++ L E + YLV + NG ++ +L +P + + ++
Sbjct: 71 PSILELYNYF------EDSNYVYLVLEMCHNGEMNRYLKNRV--------KPFSENEARH 116
Query: 429 IILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSR-EGQSHLTTR 487
+ + G+ YLH I HRD+ +N+LL +M ++ADFGLA Q + + H T
Sbjct: 117 FMHQIITGMLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT-- 171
Query: 488 VAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLST 532
+ GT Y++PE A +SDV+S G + ++ GR D T
Sbjct: 172 LCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDT 216
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 109/219 (49%), Gaps = 28/219 (12%)
Query: 315 FSQKNFIGRGGFGLVYKGILQD-GTTVAVKKVIESDFQGDAEFCN-EVEIISNLKHRNLV 372
++ IG G FG+VY+ L D G VA+KKV++ D F N E++I+ L H N+V
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 104
Query: 373 PLRGCCVVDGDNERGSERYLVYDYMPNG--NVDDHLFPSFNDGSGVAKRPLTWPQRKNII 430
LR G+ + LV DY+P V H AK+ L K +
Sbjct: 105 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY--------SRAKQTLPVIYVKLYM 156
Query: 431 LDVAKGLAYLH-YGVKPAIYHRDIKATNILLDADMRA-RVADFGLAKQSREGQSHLTTRV 488
+ + LAY+H +G I HRDIK N+LLD D ++ DFG AKQ G+ +++
Sbjct: 157 YQLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--Y 210
Query: 489 AGTHGYLAPEYALYG--QLTEKSDVYSFGVVILEIMCGR 525
+ Y APE ++G T DV+S G V+ E++ G+
Sbjct: 211 ICSRYYRAPEL-IFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 109/219 (49%), Gaps = 28/219 (12%)
Query: 315 FSQKNFIGRGGFGLVYKGILQD-GTTVAVKKVIESDFQGDAEFCN-EVEIISNLKHRNLV 372
++ IG G FG+VY+ L D G VA+KKV++ D F N E++I+ L H N+V
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 95
Query: 373 PLRGCCVVDGDNERGSERYLVYDYMPNG--NVDDHLFPSFNDGSGVAKRPLTWPQRKNII 430
LR G+ + LV DY+P V H AK+ L K +
Sbjct: 96 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY--------SRAKQTLPVIYVKLYM 147
Query: 431 LDVAKGLAYLH-YGVKPAIYHRDIKATNILLDADMRA-RVADFGLAKQSREGQSHLTTRV 488
+ + LAY+H +G I HRDIK N+LLD D ++ DFG AKQ G+ +++
Sbjct: 148 YQLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-- 201
Query: 489 AGTHGYLAPEYALYG--QLTEKSDVYSFGVVILEIMCGR 525
+ Y APE ++G T DV+S G V+ E++ G+
Sbjct: 202 ICSRYYRAPEL-IFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 100/213 (46%), Gaps = 30/213 (14%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIES-----DFQGDAEFCNEVEIISNLKHRNLVPLR 375
IGRG FG VY G L D + ++S D ++F E I+ + H N++ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 376 GCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNII---LD 432
G C+ GS +V YM +G++ + + ++ P K++I L
Sbjct: 98 GICL----RSEGSP-LVVLPYMKHGDLRNFIRNETHN-----------PTVKDLIGFGLQ 141
Query: 433 VAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTH 492
VAKG+ YL HRD+ A N +LD +VADFGLA+ + + + G
Sbjct: 142 VAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK 198
Query: 493 ---GYLAPEYALYGQLTEKSDVYSFGVVILEIM 522
++A E + T KSDV+SFGV++ E+M
Sbjct: 199 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 231
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 109/219 (49%), Gaps = 28/219 (12%)
Query: 315 FSQKNFIGRGGFGLVYKGILQD-GTTVAVKKVIESDFQGDAEFCN-EVEIISNLKHRNLV 372
++ IG G FG+VY+ L D G VA+KKV++ D F N E++I+ L H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 76
Query: 373 PLRGCCVVDGDNERGSERYLVYDYMPNG--NVDDHLFPSFNDGSGVAKRPLTWPQRKNII 430
LR G+ + LV DY+P V H AK+ L K +
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY--------SRAKQTLPVIYVKLYM 128
Query: 431 LDVAKGLAYLH-YGVKPAIYHRDIKATNILLDADMRA-RVADFGLAKQSREGQSHLTTRV 488
+ + LAY+H +G I HRDIK N+LLD D ++ DFG AKQ G+ +++
Sbjct: 129 YQLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-- 182
Query: 489 AGTHGYLAPEYALYG--QLTEKSDVYSFGVVILEIMCGR 525
+ Y APE ++G T DV+S G V+ E++ G+
Sbjct: 183 ICSRYYRAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 100/213 (46%), Gaps = 30/213 (14%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIES-----DFQGDAEFCNEVEIISNLKHRNLVPLR 375
IGRG FG VY G L D + ++S D ++F E I+ + H N++ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 376 GCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNII---LD 432
G C+ GS +V YM +G++ + + ++ P K++I L
Sbjct: 98 GICL----RSEGSP-LVVLPYMKHGDLRNFIRNETHN-----------PTVKDLIGFGLQ 141
Query: 433 VAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTH 492
VAKG+ YL HRD+ A N +LD +VADFGLA+ + + + G
Sbjct: 142 VAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK 198
Query: 493 ---GYLAPEYALYGQLTEKSDVYSFGVVILEIM 522
++A E + T KSDV+SFGV++ E+M
Sbjct: 199 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 231
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 138/327 (42%), Gaps = 58/327 (17%)
Query: 307 DLERATDKFSQKNFIGRGGFGLVYKGILQD------GTTVAVKKVIES-DFQGDAEFCNE 359
+ E + +K + +G+G FG+VY+G +D T VAVK V ES + EF NE
Sbjct: 12 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNE 71
Query: 360 VEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLF---PSFNDGSGV 416
++ ++V L G +G +V + M +G++ +L P + G
Sbjct: 72 ASVMKGFTCHHVVRLLGVV------SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPG- 124
Query: 417 AKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQ 476
+ P T + + ++A G+AYL+ HR++ A N ++ D ++ DFG+ +
Sbjct: 125 -RPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRD 180
Query: 477 SRE-------GQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALD 529
E G+ L R ++APE G T SD++SFGVV+ EI
Sbjct: 181 IYETDYYRKGGKGLLPVR------WMAPESLKDGVFTTSSDMWSFGVVLWEIT------- 227
Query: 530 LSTSGSPRACLITDWVWSLVKAGKVWQALDPSLLKEDDFLSLNPKAIMERFVLVGILCAH 589
S + P L + V V G LD P ER + +C
Sbjct: 228 -SLAEQPYQGLSNEQVLKFVMDGGY---LD------------QPDNCPERVTDLMRMCWQ 271
Query: 590 VMVALRPTISDALKMLEGDIEVPPLPD 616
+RPT + + +L+ D+ P P+
Sbjct: 272 FNPNMRPTFLEIVNLLKDDLH-PSFPE 297
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 128/267 (47%), Gaps = 45/267 (16%)
Query: 309 ERATDKFSQKNFIGRGGFGLVY----KGILQDG----TTVAVKKVIESDFQGD-AEFCNE 359
E D+ +G G FG V G+ +D T VAVK + + D ++ +E
Sbjct: 24 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 83
Query: 360 VEIISNL-KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAK 418
+E++ + KH+N++ L G C DG Y++ +Y GN+ ++L G +
Sbjct: 84 MEMMKMIGKHKNIINLLGACTQDG------PLYVIVEYASKGNLREYLQARRPPGLEFSF 137
Query: 419 RPLTWPQR----KNII---LDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADF 471
P P+ K+++ VA+G+ YL HRD+ A N+L+ D ++ADF
Sbjct: 138 NPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADF 194
Query: 472 GLAKQSREGQSHLTTRVAGTHG-----YLAPEYALYGQL-TEKSDVYSFGVVILEIMCGR 525
GLA+ H+ T+G ++APE AL+ ++ T +SDV+SFGV++ EI
Sbjct: 195 GLARDIH----HIDXXKKTTNGRLPVKWMAPE-ALFDRIYTHQSDVWSFGVLLWEI---- 245
Query: 526 KALDLSTSGSPRACLITDWVWSLVKAG 552
+ GSP + + ++ L+K G
Sbjct: 246 ----FTLGGSPYPGVPVEELFKLLKEG 268
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 109/219 (49%), Gaps = 28/219 (12%)
Query: 315 FSQKNFIGRGGFGLVYKGILQD-GTTVAVKKVIESDFQGDAEFCN-EVEIISNLKHRNLV 372
++ IG G FG+VY+ L D G VA+KKV++ D F N E++I+ L H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 76
Query: 373 PLRGCCVVDGDNERGSERYLVYDYMPNG--NVDDHLFPSFNDGSGVAKRPLTWPQRKNII 430
LR G+ + LV DY+P V H AK+ L K +
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY--------SRAKQTLPVIYVKLYM 128
Query: 431 LDVAKGLAYLH-YGVKPAIYHRDIKATNILLDADMRA-RVADFGLAKQSREGQSHLTTRV 488
+ + LAY+H +G I HRDIK N+LLD D ++ DFG AKQ G+ +++
Sbjct: 129 YQLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--Y 182
Query: 489 AGTHGYLAPEYALYG--QLTEKSDVYSFGVVILEIMCGR 525
+ Y APE ++G T DV+S G V+ E++ G+
Sbjct: 183 ICSRYYRAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 125/266 (46%), Gaps = 43/266 (16%)
Query: 309 ERATDKFSQKNFIGRGGFGLVYK----GILQD----GTTVAVKKVIESDFQGD-AEFCNE 359
E DK + +G G FG V GI +D TVAVK + + + D ++ +E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 360 VEIISNL-KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLF----PSFN--- 411
+E++ + KH+N++ L G C DG Y++ +Y GN+ ++L P
Sbjct: 91 MEMMKMIGKHKNIITLLGACTQDG------PLYVIVEYASKGNLREYLRARRPPGMEYSY 144
Query: 412 DGSGVAKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADF 471
D + V + +T+ + +A+G+ YL HRD+ A N+L+ + ++ADF
Sbjct: 145 DINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADF 201
Query: 472 GLAKQSREGQSHLTTRVAGTHG-----YLAPEYALYGQLTEKSDVYSFGVVILEIMCGRK 526
GLA+ + T T+G ++APE T +SDV+SFGV++ EI
Sbjct: 202 GLARDINNIDYYKKT----TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI----- 252
Query: 527 ALDLSTSGSPRACLITDWVWSLVKAG 552
+ GSP + + ++ L+K G
Sbjct: 253 ---FTLGGSPYPGIPVEELFKLLKEG 275
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 109/219 (49%), Gaps = 28/219 (12%)
Query: 315 FSQKNFIGRGGFGLVYKGILQD-GTTVAVKKVIESDFQGDAEFCN-EVEIISNLKHRNLV 372
++ IG G FG+VY+ L D G VA+KKV++ D F N E++I+ L H N+V
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 110
Query: 373 PLRGCCVVDGDNERGSERYLVYDYMPNG--NVDDHLFPSFNDGSGVAKRPLTWPQRKNII 430
LR G+ + LV DY+P V H AK+ L K +
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY--------SRAKQTLPVIYVKLYM 162
Query: 431 LDVAKGLAYLH-YGVKPAIYHRDIKATNILLDADMRA-RVADFGLAKQSREGQSHLTTRV 488
+ + LAY+H +G I HRDIK N+LLD D ++ DFG AKQ G+ +++
Sbjct: 163 YQLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--Y 216
Query: 489 AGTHGYLAPEYALYG--QLTEKSDVYSFGVVILEIMCGR 525
+ Y APE ++G T DV+S G V+ E++ G+
Sbjct: 217 ICSRYYRAPEL-IFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 100/213 (46%), Gaps = 30/213 (14%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIES-----DFQGDAEFCNEVEIISNLKHRNLVPLR 375
IGRG FG VY G L D + ++S D ++F E I+ + H N++ L
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 376 GCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNII---LD 432
G C+ GS +V YM +G++ + + ++ P K++I L
Sbjct: 97 GICL----RSEGSP-LVVLPYMKHGDLRNFIRNETHN-----------PTVKDLIGFGLQ 140
Query: 433 VAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTH 492
VAKG+ YL HRD+ A N +LD +VADFGLA+ + + + G
Sbjct: 141 VAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK 197
Query: 493 ---GYLAPEYALYGQLTEKSDVYSFGVVILEIM 522
++A E + T KSDV+SFGV++ E+M
Sbjct: 198 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 230
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 109/219 (49%), Gaps = 28/219 (12%)
Query: 315 FSQKNFIGRGGFGLVYKGILQD-GTTVAVKKVIESDFQGDAEFCN-EVEIISNLKHRNLV 372
++ IG G FG+VY+ L D G VA+KKV++ D F N E++I+ L H N+V
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 80
Query: 373 PLRGCCVVDGDNERGSERYLVYDYMPNG--NVDDHLFPSFNDGSGVAKRPLTWPQRKNII 430
LR G+ + LV DY+P V H AK+ L K +
Sbjct: 81 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY--------SRAKQTLPVIYVKLYM 132
Query: 431 LDVAKGLAYLH-YGVKPAIYHRDIKATNILLDADMRA-RVADFGLAKQSREGQSHLTTRV 488
+ + LAY+H +G I HRDIK N+LLD D ++ DFG AKQ G+ +++
Sbjct: 133 YQLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-- 186
Query: 489 AGTHGYLAPEYALYG--QLTEKSDVYSFGVVILEIMCGR 525
+ Y APE ++G T DV+S G V+ E++ G+
Sbjct: 187 ICSRYYRAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 125/266 (46%), Gaps = 43/266 (16%)
Query: 309 ERATDKFSQKNFIGRGGFGLVYK----GILQD----GTTVAVKKVIESDFQGD-AEFCNE 359
E DK + +G G FG V GI +D TVAVK + + + D ++ +E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 360 VEIISNL-KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLF----PSFN--- 411
+E++ + KH+N++ L G C DG Y++ +Y GN+ ++L P
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDG------PLYVIVEYASKGNLREYLRARRPPGMEYSY 144
Query: 412 DGSGVAKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADF 471
D + V + +T+ + +A+G+ YL HRD+ A N+L+ + ++ADF
Sbjct: 145 DINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADF 201
Query: 472 GLAKQSREGQSHLTTRVAGTHG-----YLAPEYALYGQLTEKSDVYSFGVVILEIMCGRK 526
GLA+ + T T+G ++APE T +SDV+SFGV++ EI
Sbjct: 202 GLARDINNIDYYKNT----TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI----- 252
Query: 527 ALDLSTSGSPRACLITDWVWSLVKAG 552
+ GSP + + ++ L+K G
Sbjct: 253 ---FTLGGSPYPGIPVEELFKLLKEG 275
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 109/219 (49%), Gaps = 28/219 (12%)
Query: 315 FSQKNFIGRGGFGLVYKGILQD-GTTVAVKKVIESDFQGDAEFCN-EVEIISNLKHRNLV 372
++ IG G FG+VY+ L D G VA+KKV++ D F N E++I+ L H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 76
Query: 373 PLRGCCVVDGDNERGSERYLVYDYMPNG--NVDDHLFPSFNDGSGVAKRPLTWPQRKNII 430
LR G+ + LV DY+P V H AK+ L K +
Sbjct: 77 RLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHY--------SRAKQTLPVIYVKLYM 128
Query: 431 LDVAKGLAYLH-YGVKPAIYHRDIKATNILLDADMRA-RVADFGLAKQSREGQSHLTTRV 488
+ + LAY+H +G I HRDIK N+LLD D ++ DFG AKQ G+ +++
Sbjct: 129 YQLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-- 182
Query: 489 AGTHGYLAPEYALYG--QLTEKSDVYSFGVVILEIMCGR 525
+ Y APE ++G T DV+S G V+ E++ G+
Sbjct: 183 ICSRYYRAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 109/219 (49%), Gaps = 28/219 (12%)
Query: 315 FSQKNFIGRGGFGLVYKGILQD-GTTVAVKKVIESDFQGDAEFCN-EVEIISNLKHRNLV 372
++ IG G FG+VY+ L D G VA+KKV++ D F N E++I+ L H N+V
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 89
Query: 373 PLRGCCVVDGDNERGSERYLVYDYMPNG--NVDDHLFPSFNDGSGVAKRPLTWPQRKNII 430
LR G+ + LV DY+P V H AK+ L K +
Sbjct: 90 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY--------SRAKQTLPVIYVKLYM 141
Query: 431 LDVAKGLAYLH-YGVKPAIYHRDIKATNILLDADMRA-RVADFGLAKQSREGQSHLTTRV 488
+ + LAY+H +G I HRDIK N+LLD D ++ DFG AKQ G+ +++
Sbjct: 142 YQLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--Y 195
Query: 489 AGTHGYLAPEYALYG--QLTEKSDVYSFGVVILEIMCGR 525
+ Y APE ++G T DV+S G V+ E++ G+
Sbjct: 196 ICSRYYRAPEL-IFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 109/219 (49%), Gaps = 28/219 (12%)
Query: 315 FSQKNFIGRGGFGLVYKGILQD-GTTVAVKKVIESDFQGDAEFCN-EVEIISNLKHRNLV 372
++ IG G FG+VY+ L D G VA+KKV++ D F N E++I+ L H N+V
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 88
Query: 373 PLRGCCVVDGDNERGSERYLVYDYMPNG--NVDDHLFPSFNDGSGVAKRPLTWPQRKNII 430
LR G+ + LV DY+P V H AK+ L K +
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY--------SRAKQTLPVIYVKLYM 140
Query: 431 LDVAKGLAYLH-YGVKPAIYHRDIKATNILLDADMRA-RVADFGLAKQSREGQSHLTTRV 488
+ + LAY+H +G I HRDIK N+LLD D ++ DFG AKQ G+ +++
Sbjct: 141 YQLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-- 194
Query: 489 AGTHGYLAPEYALYG--QLTEKSDVYSFGVVILEIMCGR 525
+ Y APE ++G T DV+S G V+ E++ G+
Sbjct: 195 ICSRYYRAPEL-IFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 101/204 (49%), Gaps = 28/204 (13%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPLRGCCVV 380
IG+G FG V G + G VAVK I++D A F E +++ L+H NLV L G V
Sbjct: 201 IGKGEFGDVMLGDYR-GNKVAVK-CIKNDATAQA-FLAEASVMTQLRHSNLVQLLGVIV- 256
Query: 381 DGDNERGSERYLVYDYMPNGNVDDHLFP---SFNDGSGVAKRPLTWPQRKNIILDVAKGL 437
E+G Y+V +YM G++ D+L S G + K LDV + +
Sbjct: 257 ---EEKGG-LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLK----------FSLDVCEAM 302
Query: 438 AYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGYLAP 497
YL HRD+ A N+L+ D A+V+DFGL K++ Q V T AP
Sbjct: 303 EYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----AP 355
Query: 498 EYALYGQLTEKSDVYSFGVVILEI 521
E + + KSDV+SFG+++ EI
Sbjct: 356 EALREKKFSTKSDVWSFGILLWEI 379
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 100/213 (46%), Gaps = 30/213 (14%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIES-----DFQGDAEFCNEVEIISNLKHRNLVPLR 375
IGRG FG VY G L D + ++S D ++F E I+ + H N++ L
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 376 GCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNII---LD 432
G C+ GS +V YM +G++ + + ++ P K++I L
Sbjct: 97 GICL----RSEGSP-LVVLPYMKHGDLRNFIRNETHN-----------PTVKDLIGFGLQ 140
Query: 433 VAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQS---HLTTRVA 489
VAKG+ YL HRD+ A N +LD +VADFGLA+ + + H T
Sbjct: 141 VAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAK 197
Query: 490 GTHGYLAPEYALYGQLTEKSDVYSFGVVILEIM 522
++A E + T KSDV+SFGV++ E+M
Sbjct: 198 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 230
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 109/237 (45%), Gaps = 38/237 (16%)
Query: 307 DLERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNL 366
++ER TD + K+ +G G +G VY+G+ + + K ++ D EF E ++ +
Sbjct: 213 EMER-TD-ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 270
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQR 426
KH NLV L G C R Y++ ++M GN+ D+L R +
Sbjct: 271 KHPNLVQLLGVCT------REPPFYIITEFMTYGNLLDYL------------RECNRQEV 312
Query: 427 KNIIL-----DVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
++L ++ + YL K HR++ A N L+ + +VADFGL SR
Sbjct: 313 NAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGL---SRLMT 366
Query: 482 SHLTTRVAGTH---GYLAPEYALYGQLTEKSDVYSFGVVILEI----MCGRKALDLS 531
T AG + APE Y + + KSDV++FGV++ EI M +DLS
Sbjct: 367 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 423
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 109/237 (45%), Gaps = 38/237 (16%)
Query: 307 DLERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNL 366
++ER TD + K+ +G G +G VY+G+ + + K ++ D EF E ++ +
Sbjct: 255 EMER-TD-ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 312
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQR 426
KH NLV L G C R Y++ ++M GN+ D+L R +
Sbjct: 313 KHPNLVQLLGVCT------REPPFYIITEFMTYGNLLDYL------------RECNRQEV 354
Query: 427 KNIIL-----DVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
++L ++ + YL K HR++ A N L+ + +VADFGL SR
Sbjct: 355 NAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGL---SRLMT 408
Query: 482 SHLTTRVAGTH---GYLAPEYALYGQLTEKSDVYSFGVVILEI----MCGRKALDLS 531
T AG + APE Y + + KSDV++FGV++ EI M +DLS
Sbjct: 409 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 465
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 126/266 (47%), Gaps = 43/266 (16%)
Query: 309 ERATDKFSQKNFIGRGGFGLVYK----GILQD----GTTVAVKKVIESDFQGD-AEFCNE 359
E DK + +G G FG V GI +D TVAVK + + + D ++ +E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 360 VEIISNL-KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLF----PSFN--- 411
+E++ + KH+N++ L G C DG Y++ +Y GN+ ++L P
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDG------PLYVIVEYASKGNLREYLRARRPPGMEYSY 144
Query: 412 DGSGVAKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADF 471
D + V + +T+ + +A+G+ YL HRD+ A N+L+ + ++ADF
Sbjct: 145 DINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADF 201
Query: 472 GLAKQSREGQSHLTTRVAGTHG-----YLAPEYALYGQLTEKSDVYSFGVVILEIMCGRK 526
GLA+ +++ T+G ++APE T +SDV+SFGV++ EI
Sbjct: 202 GLARDI----NNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI----- 252
Query: 527 ALDLSTSGSPRACLITDWVWSLVKAG 552
+ GSP + + ++ L+K G
Sbjct: 253 ---FTLGGSPYPGIPVEELFKLLKEG 275
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 109/219 (49%), Gaps = 28/219 (12%)
Query: 315 FSQKNFIGRGGFGLVYKGILQD-GTTVAVKKVIESDFQGDAEFCN-EVEIISNLKHRNLV 372
++ IG G FG+VY+ L D G VA+KKV++ D F N E++I+ L H N+V
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 112
Query: 373 PLRGCCVVDGDNERGSERYLVYDYMPNG--NVDDHLFPSFNDGSGVAKRPLTWPQRKNII 430
LR G+ + LV DY+P V H AK+ L K +
Sbjct: 113 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY--------SRAKQTLPVIYVKLYM 164
Query: 431 LDVAKGLAYLH-YGVKPAIYHRDIKATNILLDADMRA-RVADFGLAKQSREGQSHLTTRV 488
+ + LAY+H +G I HRDIK N+LLD D ++ DFG AKQ G+ +++
Sbjct: 165 YQLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--Y 218
Query: 489 AGTHGYLAPEYALYG--QLTEKSDVYSFGVVILEIMCGR 525
+ Y APE ++G T DV+S G V+ E++ G+
Sbjct: 219 ICSRYYRAPEL-IFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 109/219 (49%), Gaps = 28/219 (12%)
Query: 315 FSQKNFIGRGGFGLVYKGILQD-GTTVAVKKVIESDFQGDAEFCN-EVEIISNLKHRNLV 372
++ IG G FG+VY+ L D G VA+KKV++ D F N E++I+ L H N+V
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 81
Query: 373 PLRGCCVVDGDNERGSERYLVYDYMPNG--NVDDHLFPSFNDGSGVAKRPLTWPQRKNII 430
LR G+ + LV DY+P V H AK+ L K +
Sbjct: 82 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY--------SRAKQTLPVIYVKLYM 133
Query: 431 LDVAKGLAYLH-YGVKPAIYHRDIKATNILLDADMRA-RVADFGLAKQSREGQSHLTTRV 488
+ + LAY+H +G I HRDIK N+LLD D ++ DFG AKQ G+ +++
Sbjct: 134 YQLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--Y 187
Query: 489 AGTHGYLAPEYALYG--QLTEKSDVYSFGVVILEIMCGR 525
+ Y APE ++G T DV+S G V+ E++ G+
Sbjct: 188 ICSRYYRAPEL-IFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 98/213 (46%), Gaps = 22/213 (10%)
Query: 315 FSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIE--SDFQGDAEFCNEVEIISNLKHRNLV 372
F++ IG+G FG V+KGI V K+I+ + E+ ++S +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 373 PLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILD 432
G + D ++ +++ +Y+ G+ D L P PL Q I+ +
Sbjct: 69 KYYGSYLKD------TKLWIIMEYLGGGSALDLLEPG----------PLDETQIATILRE 112
Query: 433 VAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTH 492
+ KGL YLH K HRDIKA N+LL ++ADFG+A Q + Q T V GT
Sbjct: 113 ILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTP 168
Query: 493 GYLAPEYALYGQLTEKSDVYSFGVVILEIMCGR 525
++APE K+D++S G+ +E+ G
Sbjct: 169 FWMAPEVIKQSAYDSKADIWSLGITAIELARGE 201
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 104/216 (48%), Gaps = 19/216 (8%)
Query: 307 DLERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNL 366
++ R + K +K +G G FG V+ G + T VAVK + A F E ++ L
Sbjct: 8 EIPRESIKLVKK--LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQA-FLEEANLMKTL 64
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQR 426
+H LV L + Y++ ++M G++ D L ++G V P+
Sbjct: 65 QHDKLVRLYAVVT------KEEPIYIITEFMAKGSLLDFL--KSDEGGKV-----LLPKL 111
Query: 427 KNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTT 486
+ +A+G+AY+ + HRD++A N+L+ + ++ADFGLA+ + +
Sbjct: 112 IDFSAQIAEGMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTARE 168
Query: 487 RVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIM 522
+ APE +G T KS+V+SFG+++ EI+
Sbjct: 169 GAKFPIKWTAPEAINFGCFTIKSNVWSFGILLYEIV 204
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 126/266 (47%), Gaps = 43/266 (16%)
Query: 309 ERATDKFSQKNFIGRGGFGLVYK----GILQD----GTTVAVKKVIESDFQGD-AEFCNE 359
E DK + +G G FG V GI +D TVAVK + + + D ++ +E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 360 VEIISNL-KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLF----PSFN--- 411
+E++ + KH+N++ L G C DG Y++ +Y GN+ ++L P
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDG------PLYVIVEYASKGNLREYLRARRPPGMEXSY 144
Query: 412 DGSGVAKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADF 471
D + V + +T+ + +A+G+ YL HRD+ A N+L+ + ++ADF
Sbjct: 145 DINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADF 201
Query: 472 GLAKQSREGQSHLTTRVAGTHG-----YLAPEYALYGQLTEKSDVYSFGVVILEIMCGRK 526
GLA+ +++ T+G ++APE T +SDV+SFGV++ EI
Sbjct: 202 GLARDI----NNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI----- 252
Query: 527 ALDLSTSGSPRACLITDWVWSLVKAG 552
+ GSP + + ++ L+K G
Sbjct: 253 ---FTLGGSPYPGIPVEELFKLLKEG 275
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 109/219 (49%), Gaps = 28/219 (12%)
Query: 315 FSQKNFIGRGGFGLVYKGILQD-GTTVAVKKVIESDFQGDAEFCN-EVEIISNLKHRNLV 372
++ IG G FG+VY+ L D G VA+KKV++ D F N E++I+ L H N+V
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 114
Query: 373 PLRGCCVVDGDNERGSERYLVYDYMPNG--NVDDHLFPSFNDGSGVAKRPLTWPQRKNII 430
LR G+ + LV DY+P V H AK+ L K +
Sbjct: 115 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY--------SRAKQTLPVIYVKLYM 166
Query: 431 LDVAKGLAYLH-YGVKPAIYHRDIKATNILLDADMRA-RVADFGLAKQSREGQSHLTTRV 488
+ + LAY+H +G I HRDIK N+LLD D ++ DFG AKQ G+ +++
Sbjct: 167 YQLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--Y 220
Query: 489 AGTHGYLAPEYALYG--QLTEKSDVYSFGVVILEIMCGR 525
+ Y APE ++G T DV+S G V+ E++ G+
Sbjct: 221 ICSRYYRAPEL-IFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 101/208 (48%), Gaps = 22/208 (10%)
Query: 321 IGRGGFGLVYK---GILQD--GTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPLR 375
+G+G FG V LQD G VAVKK+ S + +F E+EI+ +L+H N+V +
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 376 GCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAK 435
G C G L+ +++P G++ ++L K + + + K
Sbjct: 81 GVCYSAGRRNLK----LIMEFLPYGSLREYL--------QKHKERIDHIKLLQYTSQICK 128
Query: 436 GLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHG-- 493
G+ YL G K I HRD+ NIL++ + R ++ DFGL K + + + G
Sbjct: 129 GMEYL--GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 185
Query: 494 YLAPEYALYGQLTEKSDVYSFGVVILEI 521
+ APE + + SDV+SFGVV+ E+
Sbjct: 186 WYAPESLTESKFSVASDVWSFGVVLYEL 213
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 125/266 (46%), Gaps = 43/266 (16%)
Query: 309 ERATDKFSQKNFIGRGGFGLVYK----GILQD----GTTVAVKKVIESDFQGD-AEFCNE 359
E DK + +G G FG V GI +D TVAVK + + + D ++ +E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSE 90
Query: 360 VEIISNL-KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLF----PSFN--- 411
+E++ + KH+N++ L G C DG Y++ +Y GN+ ++L P
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDG------PLYVIVEYASKGNLREYLRARRPPGMEYSY 144
Query: 412 DGSGVAKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADF 471
D + V + +T+ + +A+G+ YL HRD+ A N+L+ + ++ADF
Sbjct: 145 DINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADF 201
Query: 472 GLAKQSREGQSHLTTRVAGTHG-----YLAPEYALYGQLTEKSDVYSFGVVILEIMCGRK 526
GLA+ + T T+G ++APE T +SDV+SFGV++ EI
Sbjct: 202 GLARDINNIDYYKKT----TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI----- 252
Query: 527 ALDLSTSGSPRACLITDWVWSLVKAG 552
+ GSP + + ++ L+K G
Sbjct: 253 ---FTLGGSPYPGIPVEELFKLLKEG 275
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 125/266 (46%), Gaps = 43/266 (16%)
Query: 309 ERATDKFSQKNFIGRGGFGLVYK----GILQD----GTTVAVKKVIESDFQGD-AEFCNE 359
E DK + +G G FG V GI +D TVAVK + + + D ++ +E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 360 VEIISNL-KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLF----PSFN--- 411
+E++ + KH+N++ L G C DG Y++ +Y GN+ ++L P
Sbjct: 91 MEMMKMIGKHKNIIHLLGACTQDG------PLYVIVEYASKGNLREYLRARRPPGMEYSY 144
Query: 412 DGSGVAKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADF 471
D + V + +T+ + +A+G+ YL HRD+ A N+L+ + ++ADF
Sbjct: 145 DINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADF 201
Query: 472 GLAKQSREGQSHLTTRVAGTHG-----YLAPEYALYGQLTEKSDVYSFGVVILEIMCGRK 526
GLA+ + T T+G ++APE T +SDV+SFGV++ EI
Sbjct: 202 GLARDINNIDYYKKT----TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI----- 252
Query: 527 ALDLSTSGSPRACLITDWVWSLVKAG 552
+ GSP + + ++ L+K G
Sbjct: 253 ---FTLGGSPYPGIPVEELFKLLKEG 275
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 109/220 (49%), Gaps = 41/220 (18%)
Query: 322 GRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIIS--NLKHRNLVPLRGCCV 379
RG FG V+K L + VAVK D Q + NE E+ S +KH N++ G
Sbjct: 33 ARGRFGCVWKAQLLN-EYVAVKIFPIQDKQS---WQNEYEVYSLPGMKHENILQFIGA-- 86
Query: 380 VDGDNERGS----ERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAK 435
+RG+ + +L+ + G++ D L + ++W + +I +A+
Sbjct: 87 ----EKRGTSVDVDLWLITAFHEKGSLSDFLKANV----------VSWNELCHIAETMAR 132
Query: 436 GLAYLHY-------GVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR- 487
GLAYLH G KPAI HRDIK+ N+LL ++ A +ADFGLA + G+S T
Sbjct: 133 GLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHG 192
Query: 488 VAGTHGYLAPEYALYGQLTEKS------DVYSFGVVILEI 521
GT Y+APE L G + + D+Y+ G+V+ E+
Sbjct: 193 QVGTRRYMAPE-VLEGAINFQRDAFLRIDMYAMGLVLWEL 231
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 109/219 (49%), Gaps = 28/219 (12%)
Query: 315 FSQKNFIGRGGFGLVYKGILQD-GTTVAVKKVIESDFQGDAEFCN-EVEIISNLKHRNLV 372
++ IG G FG+VY+ L D G VA+KKV++ D F N E++I+ L H N+V
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 155
Query: 373 PLRGCCVVDGDNERGSERYLVYDYMPNG--NVDDHLFPSFNDGSGVAKRPLTWPQRKNII 430
LR G+ + LV DY+P V H AK+ L K +
Sbjct: 156 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY--------SRAKQTLPVIYVKLYM 207
Query: 431 LDVAKGLAYLH-YGVKPAIYHRDIKATNILLDADMRA-RVADFGLAKQSREGQSHLTTRV 488
+ + LAY+H +G I HRDIK N+LLD D ++ DFG AKQ G+ +++
Sbjct: 208 YQLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--Y 261
Query: 489 AGTHGYLAPEYALYG--QLTEKSDVYSFGVVILEIMCGR 525
+ Y APE ++G T DV+S G V+ E++ G+
Sbjct: 262 ICSRYYRAPEL-IFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 130/267 (48%), Gaps = 45/267 (16%)
Query: 309 ERATDKFSQKNFIGRGGFGLVY----KGILQDG----TTVAVKKVIESDFQGD-AEFCNE 359
E D+ +G G FG V G+ +D T VAVK + + D ++ +E
Sbjct: 24 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 83
Query: 360 VEIISNL-KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAK 418
+E++ + KH+N++ L G C DG Y++ +Y GN+ ++L G +
Sbjct: 84 MEMMKMIGKHKNIINLLGACTQDG------PLYVIVEYASKGNLREYLQARRPPGLEYSY 137
Query: 419 RPLTWPQR----KNII---LDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADF 471
P P+ K+++ VA+G+ YL K I HRD+ A N+L+ D ++ADF
Sbjct: 138 NPSHNPEEQLSSKDLVSCAYQVARGMEYL--ASKKCI-HRDLAARNVLVTEDNVMKIADF 194
Query: 472 GLAKQSREGQSHLTTRVAGTHG-----YLAPEYALYGQL-TEKSDVYSFGVVILEIMCGR 525
GLA+ H+ T+G ++APE AL+ ++ T +SDV+SFGV++ EI
Sbjct: 195 GLARDIH----HIDYYKKTTNGRLPVKWMAPE-ALFDRIYTHQSDVWSFGVLLWEI---- 245
Query: 526 KALDLSTSGSPRACLITDWVWSLVKAG 552
+ GSP + + ++ L+K G
Sbjct: 246 ----FTLGGSPYPGVPVEELFKLLKEG 268
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 130/267 (48%), Gaps = 45/267 (16%)
Query: 309 ERATDKFSQKNFIGRGGFGLVY----KGILQDG----TTVAVKKVIESDFQGD-AEFCNE 359
E D+ +G G FG V G+ +D T VAVK + + D ++ +E
Sbjct: 17 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 76
Query: 360 VEIISNL-KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAK 418
+E++ + KH+N++ L G C DG Y++ +Y GN+ ++L G +
Sbjct: 77 MEMMKMIGKHKNIINLLGACTQDG------PLYVIVEYASKGNLREYLQARRPPGLEYSY 130
Query: 419 RPLTWPQR----KNII---LDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADF 471
P P+ K+++ VA+G+ YL K I HRD+ A N+L+ D ++ADF
Sbjct: 131 NPSHNPEEQLSSKDLVSCAYQVARGMEYL--ASKKCI-HRDLAARNVLVTEDNVMKIADF 187
Query: 472 GLAKQSREGQSHLTTRVAGTHG-----YLAPEYALYGQL-TEKSDVYSFGVVILEIMCGR 525
GLA+ H+ T+G ++APE AL+ ++ T +SDV+SFGV++ EI
Sbjct: 188 GLARDIH----HIDYYKKTTNGRLPVKWMAPE-ALFDRIYTHQSDVWSFGVLLWEI---- 238
Query: 526 KALDLSTSGSPRACLITDWVWSLVKAG 552
+ GSP + + ++ L+K G
Sbjct: 239 ----FTLGGSPYPGVPVEELFKLLKEG 261
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 130/267 (48%), Gaps = 45/267 (16%)
Query: 309 ERATDKFSQKNFIGRGGFGLVY----KGILQDG----TTVAVKKVIESDFQGD-AEFCNE 359
E D+ +G G FG V G+ +D T VAVK + + D ++ +E
Sbjct: 65 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 124
Query: 360 VEIISNL-KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAK 418
+E++ + KH+N++ L G C DG Y++ +Y GN+ ++L G +
Sbjct: 125 MEMMKMIGKHKNIINLLGACTQDG------PLYVIVEYASKGNLREYLQARRPPGLEYSY 178
Query: 419 RPLTWPQR----KNII---LDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADF 471
P P+ K+++ VA+G+ YL K I HRD+ A N+L+ D ++ADF
Sbjct: 179 NPSHNPEEQLSSKDLVSCAYQVARGMEYL--ASKKCI-HRDLAARNVLVTEDNVMKIADF 235
Query: 472 GLAKQSREGQSHLTTRVAGTHG-----YLAPEYALYGQL-TEKSDVYSFGVVILEIMCGR 525
GLA+ H+ T+G ++APE AL+ ++ T +SDV+SFGV++ EI
Sbjct: 236 GLARDIH----HIDYYKKTTNGRLPVKWMAPE-ALFDRIYTHQSDVWSFGVLLWEI---- 286
Query: 526 KALDLSTSGSPRACLITDWVWSLVKAG 552
+ GSP + + ++ L+K G
Sbjct: 287 ----FTLGGSPYPGVPVEELFKLLKEG 309
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 130/267 (48%), Gaps = 45/267 (16%)
Query: 309 ERATDKFSQKNFIGRGGFGLVY----KGILQDG----TTVAVKKVIESDFQGD-AEFCNE 359
E D+ +G G FG V G+ +D T VAVK + + D ++ +E
Sbjct: 16 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 75
Query: 360 VEIISNL-KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAK 418
+E++ + KH+N++ L G C DG Y++ +Y GN+ ++L G +
Sbjct: 76 MEMMKMIGKHKNIINLLGACTQDG------PLYVIVEYASKGNLREYLQARRPPGLEYSY 129
Query: 419 RPLTWPQR----KNII---LDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADF 471
P P+ K+++ VA+G+ YL K I HRD+ A N+L+ D ++ADF
Sbjct: 130 NPSHNPEEQLSSKDLVSCAYQVARGMEYL--ASKKCI-HRDLAARNVLVTEDNVMKIADF 186
Query: 472 GLAKQSREGQSHLTTRVAGTHG-----YLAPEYALYGQL-TEKSDVYSFGVVILEIMCGR 525
GLA+ H+ T+G ++APE AL+ ++ T +SDV+SFGV++ EI
Sbjct: 187 GLARDIH----HIDYYKKTTNGRLPVKWMAPE-ALFDRIYTHQSDVWSFGVLLWEI---- 237
Query: 526 KALDLSTSGSPRACLITDWVWSLVKAG 552
+ GSP + + ++ L+K G
Sbjct: 238 ----FTLGGSPYPGVPVEELFKLLKEG 260
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 130/267 (48%), Gaps = 45/267 (16%)
Query: 309 ERATDKFSQKNFIGRGGFGLVY----KGILQDG----TTVAVKKVIESDFQGD-AEFCNE 359
E D+ +G G FG V G+ +D T VAVK + + D ++ +E
Sbjct: 13 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 72
Query: 360 VEIISNL-KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAK 418
+E++ + KH+N++ L G C DG Y++ +Y GN+ ++L G +
Sbjct: 73 MEMMKMIGKHKNIINLLGACTQDG------PLYVIVEYASKGNLREYLQARRPPGLEYSY 126
Query: 419 RPLTWPQR----KNII---LDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADF 471
P P+ K+++ VA+G+ YL K I HRD+ A N+L+ D ++ADF
Sbjct: 127 NPSHNPEEQLSSKDLVSCAYQVARGMEYL--ASKKCI-HRDLAARNVLVTEDNVMKIADF 183
Query: 472 GLAKQSREGQSHLTTRVAGTHG-----YLAPEYALYGQL-TEKSDVYSFGVVILEIMCGR 525
GLA+ H+ T+G ++APE AL+ ++ T +SDV+SFGV++ EI
Sbjct: 184 GLARDIH----HIDYYKKTTNGRLPVKWMAPE-ALFDRIYTHQSDVWSFGVLLWEI---- 234
Query: 526 KALDLSTSGSPRACLITDWVWSLVKAG 552
+ GSP + + ++ L+K G
Sbjct: 235 ----FTLGGSPYPGVPVEELFKLLKEG 257
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 101/210 (48%), Gaps = 25/210 (11%)
Query: 321 IGRGGFG---LVYKGILQDGT--TVAVKKVIES-DFQGDAEFCNEVEIISNLKHRNLVPL 374
+G G FG L DGT VAVK + E Q + + E+EI+ L H ++V
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 375 RGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVA 434
+GCC G+ LV +Y+P G++ D+L P G+A+ L Q +
Sbjct: 77 KGCCEDQGEKSVQ----LVMEYVPLGSLRDYL-P--RHCVGLAQLLLFAQQ-------IC 122
Query: 435 KGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHG- 493
+G+AYLH HR + A N+LLD D ++ DFGLAK EG + R G
Sbjct: 123 EGMAYLH---AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPV 179
Query: 494 -YLAPEYALYGQLTEKSDVYSFGVVILEIM 522
+ APE + SDV+SFGV + E++
Sbjct: 180 FWYAPECLKECKFYYASDVWSFGVTLYELL 209
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 110/225 (48%), Gaps = 28/225 (12%)
Query: 314 KFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIE-----SDFQGDAEFCNEVEIISNLK 367
+ + +G G FG VYKGI + +G TV + I+ + + + EF +E I++++
Sbjct: 39 ELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMD 98
Query: 368 HRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRK 427
H +LV L G C+ LV MP+G + +++ D G ++ L W
Sbjct: 99 HPHLVRLLGVCL-------SPTIQLVTQLMPHGCLLEYVH-EHKDNIG-SQLLLNW---- 145
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+ +AKG+ YL + + HRD+ A N+L+ + ++ DFGLA+ EG
Sbjct: 146 --CVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLAR-LLEGDEKEYNA 199
Query: 488 VAGTH--GYLAPEYALYGQLTEKSDVYSFGVVILEIMC-GRKALD 529
G ++A E Y + T +SDV+S+GV I E+M G K D
Sbjct: 200 DGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYD 244
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 101/210 (48%), Gaps = 25/210 (11%)
Query: 321 IGRGGFG---LVYKGILQDGT--TVAVKKVIES-DFQGDAEFCNEVEIISNLKHRNLVPL 374
+G G FG L DGT VAVK + E Q + + E+EI+ L H ++V
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 375 RGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVA 434
+GCC G+ LV +Y+P G++ D+L P G+A+ L Q +
Sbjct: 76 KGCCEDQGEKSVQ----LVMEYVPLGSLRDYL-P--RHCVGLAQLLLFAQQ-------IC 121
Query: 435 KGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHG- 493
+G+AYLH HR + A N+LLD D ++ DFGLAK EG + R G
Sbjct: 122 EGMAYLH---AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPV 178
Query: 494 -YLAPEYALYGQLTEKSDVYSFGVVILEIM 522
+ APE + SDV+SFGV + E++
Sbjct: 179 FWYAPECLKECKFYYASDVWSFGVTLYELL 208
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 130/267 (48%), Gaps = 45/267 (16%)
Query: 309 ERATDKFSQKNFIGRGGFGLVYK----GILQDG----TTVAVKKVIESDFQGD-AEFCNE 359
E D+ +G G FG V G+ +D T VAVK + + D ++ +E
Sbjct: 24 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 83
Query: 360 VEIISNL-KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAK 418
+E++ + KH+N++ L G C DG Y++ +Y GN+ ++L G +
Sbjct: 84 MEMMKMIGKHKNIINLLGACTQDG------PLYVIVEYASKGNLREYLQAREPPGLEYSY 137
Query: 419 RPLTWPQR----KNII---LDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADF 471
P P+ K+++ VA+G+ YL K I HRD+ A N+L+ D ++ADF
Sbjct: 138 NPSHNPEEQLSSKDLVSCAYQVARGMEYL--ASKKCI-HRDLAARNVLVTEDNVMKIADF 194
Query: 472 GLAKQSREGQSHLTTRVAGTHG-----YLAPEYALYGQL-TEKSDVYSFGVVILEIMCGR 525
GLA+ H+ T+G ++APE AL+ ++ T +SDV+SFGV++ EI
Sbjct: 195 GLARDIH----HIDYYKKTTNGRLPVKWMAPE-ALFDRIYTHQSDVWSFGVLLWEI---- 245
Query: 526 KALDLSTSGSPRACLITDWVWSLVKAG 552
+ GSP + + ++ L+K G
Sbjct: 246 ----FTLGGSPYPGVPVEELFKLLKEG 268
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 129/267 (48%), Gaps = 45/267 (16%)
Query: 309 ERATDKFSQKNFIGRGGFGLVY----KGILQDG----TTVAVKKVIESDFQGD-AEFCNE 359
E D+ +G G FG V G+ +D T VAVK + + D ++ +E
Sbjct: 24 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 83
Query: 360 VEIISNL-KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAK 418
+E++ + KH+N++ L G C DG Y++ +Y GN+ ++L G
Sbjct: 84 MEMMKMIGKHKNIINLLGACTQDG------PLYVIVEYASKGNLREYLQARRPPGLEYCY 137
Query: 419 RPLTWPQR----KNII---LDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADF 471
P P+ K+++ VA+G+ YL K I HRD+ A N+L+ D ++ADF
Sbjct: 138 NPSHNPEEQLSSKDLVSCAYQVARGMEYL--ASKKCI-HRDLAARNVLVTEDNVMKIADF 194
Query: 472 GLAKQSREGQSHLTTRVAGTHG-----YLAPEYALYGQL-TEKSDVYSFGVVILEIMCGR 525
GLA+ H+ T+G ++APE AL+ ++ T +SDV+SFGV++ EI
Sbjct: 195 GLARDIH----HIDYYKKTTNGRLPVKWMAPE-ALFDRIYTHQSDVWSFGVLLWEI---- 245
Query: 526 KALDLSTSGSPRACLITDWVWSLVKAG 552
+ GSP + + ++ L+K G
Sbjct: 246 ----FTLGGSPYPGVPVEELFKLLKEG 268
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 101/216 (46%), Gaps = 25/216 (11%)
Query: 316 SQKNFIGRGGFGLVYKGILQDGT-----TVAVKKVIESDFQGD-AEFCNEVEIISNLKHR 369
+++ IG G FG VYKG+L+ + VA+K + + +F E I+ H
Sbjct: 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHH 106
Query: 370 NLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNI 429
N++ L G + ++ +YM NG +D L DG + Q +
Sbjct: 107 NIIRLEGVI------SKYKPMMIITEYMENGALDKFL--REKDGE------FSVLQLVGM 152
Query: 430 ILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVA 489
+ +A G+ YL HRD+ A NIL+++++ +V+DFGL++ + T
Sbjct: 153 LRGIAAGMKYL---ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSG 209
Query: 490 GTHG--YLAPEYALYGQLTEKSDVYSFGVVILEIMC 523
G + APE Y + T SDV+SFG+V+ E+M
Sbjct: 210 GKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMT 245
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 110/225 (48%), Gaps = 28/225 (12%)
Query: 314 KFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIE-----SDFQGDAEFCNEVEIISNLK 367
+ + +G G FG VYKGI + +G TV + I+ + + + EF +E I++++
Sbjct: 16 ELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMD 75
Query: 368 HRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRK 427
H +LV L G C+ LV MP+G + +++ D G ++ L W
Sbjct: 76 HPHLVRLLGVCL-------SPTIQLVTQLMPHGCLLEYVH-EHKDNIG-SQLLLNW---- 122
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+ +AKG+ YL + + HRD+ A N+L+ + ++ DFGLA+ EG
Sbjct: 123 --CVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLAR-LLEGDEKEYNA 176
Query: 488 VAGTH--GYLAPEYALYGQLTEKSDVYSFGVVILEIMC-GRKALD 529
G ++A E Y + T +SDV+S+GV I E+M G K D
Sbjct: 177 DGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYD 221
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 103/210 (49%), Gaps = 25/210 (11%)
Query: 321 IGRGGFG---LVYKGILQDGT--TVAVKKV-IESDFQGDAEFCNEVEIISNLKHRNLVPL 374
+G G FG L DGT VAVK + + Q + + E++I+ L H +++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 375 RGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVA 434
+GCC G+ LV +Y+P G++ D+L P + G+A+ L Q +
Sbjct: 82 KGCCEDQGEKSLQ----LVMEYVPLGSLRDYL-PRHS--IGLAQLLLFAQQ-------IC 127
Query: 435 KGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHG- 493
+G+AYLH HR++ A N+LLD D ++ DFGLAK EG + R G
Sbjct: 128 EGMAYLH---SQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPV 184
Query: 494 -YLAPEYALYGQLTEKSDVYSFGVVILEIM 522
+ APE + SDV+SFGV + E++
Sbjct: 185 FWYAPECLKEYKFYYASDVWSFGVTLYELL 214
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 104/210 (49%), Gaps = 25/210 (11%)
Query: 321 IGRGGFG---LVYKGILQDGT--TVAVKKV-IESDFQGDAEFCNEVEIISNLKHRNLVPL 374
+G G FG L DGT VAVK + ++ Q + + E++I+ L H +++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 375 RGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVA 434
+GCC ++ + LV +Y+P G++ D+L P + G+A+ L Q +
Sbjct: 99 KGCC----EDAGAASLQLVMEYVPLGSLRDYL-PRHS--IGLAQLLLFAQQ-------IC 144
Query: 435 KGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHG- 493
+G+AYLH HRD+ A N+LLD D ++ DFGLAK EG R G
Sbjct: 145 EGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPV 201
Query: 494 -YLAPEYALYGQLTEKSDVYSFGVVILEIM 522
+ APE + SDV+SFGV + E++
Sbjct: 202 FWYAPECLKEYKFYYASDVWSFGVTLYELL 231
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 103/210 (49%), Gaps = 25/210 (11%)
Query: 321 IGRGGFG---LVYKGILQDGT--TVAVKKV-IESDFQGDAEFCNEVEIISNLKHRNLVPL 374
+G G FG L DGT VAVK + + Q + + E++I+ L H +++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 375 RGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVA 434
+GCC G+ LV +Y+P G++ D+L P + G+A+ L Q +
Sbjct: 82 KGCCEDQGEKSLQ----LVMEYVPLGSLRDYL-PRHS--IGLAQLLLFAQQ-------IC 127
Query: 435 KGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHG- 493
+G+AYLH HR++ A N+LLD D ++ DFGLAK EG + R G
Sbjct: 128 EGMAYLH---AQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPV 184
Query: 494 -YLAPEYALYGQLTEKSDVYSFGVVILEIM 522
+ APE + SDV+SFGV + E++
Sbjct: 185 FWYAPECLKEYKFYYASDVWSFGVTLYELL 214
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 125/266 (46%), Gaps = 43/266 (16%)
Query: 309 ERATDKFSQKNFIGRGGFGLVYK----GILQD----GTTVAVKKVIESDFQGD-AEFCNE 359
E DK + +G G FG V GI +D TVAVK + + + D ++ +E
Sbjct: 18 EFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 77
Query: 360 VEIISNL-KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLF----PSFN--- 411
+E++ + KH+N++ L G C DG Y++ +Y GN+ ++L P
Sbjct: 78 MEMMKMIGKHKNIINLLGACTQDG------PLYVIVEYASKGNLREYLRARRPPGMEYSY 131
Query: 412 DGSGVAKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADF 471
D + V + +T+ + +A+G+ YL HRD+ A N+L+ + ++ADF
Sbjct: 132 DINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADF 188
Query: 472 GLAKQSREGQSHLTTRVAGTHG-----YLAPEYALYGQLTEKSDVYSFGVVILEIMCGRK 526
GLA+ + T T+G ++APE T +SDV+SFGV++ EI
Sbjct: 189 GLARDINNIDYYKKT----TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI----- 239
Query: 527 ALDLSTSGSPRACLITDWVWSLVKAG 552
+ GSP + + ++ L+K G
Sbjct: 240 ---FTLGGSPYPGIPVEELFKLLKEG 262
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 97/189 (51%), Gaps = 18/189 (9%)
Query: 337 GTTVAVKKVI-ESDFQGDAEFCNEVEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYD 395
G VAVK + ES A+ E+EI+ NL H N+V +G C DG G+ L+ +
Sbjct: 38 GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDG----GNGIKLIME 93
Query: 396 YMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKA 455
++P+G++ ++L + K + Q+ + + KG+ YL G + + HRD+ A
Sbjct: 94 FLPSGSLKEYLPKN--------KNKINLKQQLKYAVQICKGMDYL--GSRQYV-HRDLAA 142
Query: 456 TNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHG--YLAPEYALYGQLTEKSDVYS 513
N+L++++ + ++ DFGL K + T + + APE + + SDV+S
Sbjct: 143 RNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWS 202
Query: 514 FGVVILEIM 522
FGV + E++
Sbjct: 203 FGVTLHELL 211
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 129/267 (48%), Gaps = 45/267 (16%)
Query: 309 ERATDKFSQKNFIGRGGFGLVY----KGILQDG----TTVAVKKVIESDFQGD-AEFCNE 359
E D+ +G G FG V G+ +D T VAVK + + D ++ +E
Sbjct: 9 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 68
Query: 360 VEIISNL-KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAK 418
+E++ + KH+N++ L G C DG Y++ +Y GN+ ++L G
Sbjct: 69 MEMMKMIGKHKNIINLLGACTQDG------PLYVIVEYASKGNLREYLQARRPPGLEYCY 122
Query: 419 RPLTWPQR----KNII---LDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADF 471
P P+ K+++ VA+G+ YL K I HRD+ A N+L+ D ++ADF
Sbjct: 123 NPSHNPEEQLSSKDLVSCAYQVARGMEYL--ASKKCI-HRDLAARNVLVTEDNVMKIADF 179
Query: 472 GLAKQSREGQSHLTTRVAGTHG-----YLAPEYALYGQL-TEKSDVYSFGVVILEIMCGR 525
GLA+ H+ T+G ++APE AL+ ++ T +SDV+SFGV++ EI
Sbjct: 180 GLARDIH----HIDYYKKTTNGRLPVKWMAPE-ALFDRIYTHQSDVWSFGVLLWEI---- 230
Query: 526 KALDLSTSGSPRACLITDWVWSLVKAG 552
+ GSP + + ++ L+K G
Sbjct: 231 ----FTLGGSPYPGVPVEELFKLLKEG 253
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 125/266 (46%), Gaps = 43/266 (16%)
Query: 309 ERATDKFSQKNFIGRGGFGLVYK----GILQD----GTTVAVKKVIESDFQGD-AEFCNE 359
E DK + +G G FG V GI +D TVAVK + + + D ++ +E
Sbjct: 23 EFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 82
Query: 360 VEIISNL-KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLF----PSFN--- 411
+E++ + KH+N++ L G C DG Y++ +Y GN+ ++L P
Sbjct: 83 MEMMKMIGKHKNIINLLGACTQDG------PLYVIVEYASKGNLREYLRARRPPGMEYSY 136
Query: 412 DGSGVAKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADF 471
D + V + +T+ + +A+G+ YL HRD+ A N+L+ + ++ADF
Sbjct: 137 DINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADF 193
Query: 472 GLAKQSREGQSHLTTRVAGTHG-----YLAPEYALYGQLTEKSDVYSFGVVILEIMCGRK 526
GLA+ + T T+G ++APE T +SDV+SFGV++ EI
Sbjct: 194 GLARDINNIDYYKKT----TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI----- 244
Query: 527 ALDLSTSGSPRACLITDWVWSLVKAG 552
+ GSP + + ++ L+K G
Sbjct: 245 ---FTLGGSPYPGIPVEELFKLLKEG 267
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 125/266 (46%), Gaps = 43/266 (16%)
Query: 309 ERATDKFSQKNFIGRGGFGLVYK----GILQD----GTTVAVKKVIESDFQGD-AEFCNE 359
E DK + +G G FG V GI +D TVAVK + + + D ++ +E
Sbjct: 20 EFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 79
Query: 360 VEIISNL-KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLF----PSFN--- 411
+E++ + KH+N++ L G C DG Y++ +Y GN+ ++L P
Sbjct: 80 MEMMKMIGKHKNIINLLGACTQDG------PLYVIVEYASKGNLREYLRARRPPGMEYSY 133
Query: 412 DGSGVAKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADF 471
D + V + +T+ + +A+G+ YL HRD+ A N+L+ + ++ADF
Sbjct: 134 DINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADF 190
Query: 472 GLAKQSREGQSHLTTRVAGTHG-----YLAPEYALYGQLTEKSDVYSFGVVILEIMCGRK 526
GLA+ + T T+G ++APE T +SDV+SFGV++ EI
Sbjct: 191 GLARDINNIDYYKKT----TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI----- 241
Query: 527 ALDLSTSGSPRACLITDWVWSLVKAG 552
+ GSP + + ++ L+K G
Sbjct: 242 ---FTLGGSPYPGIPVEELFKLLKEG 264
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 124/262 (47%), Gaps = 43/262 (16%)
Query: 313 DKFSQKNFIGRGGFGLVYK----GILQD----GTTVAVKKVIESDFQGD-AEFCNEVEII 363
DK + +G G FG V GI +D TVAVK + + + D ++ +E+E++
Sbjct: 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 140
Query: 364 SNL-KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLF----PSFN---DGSG 415
+ KH+N++ L G C DG Y++ +Y GN+ ++L P D +
Sbjct: 141 KMIGKHKNIINLLGACTQDG------PLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 194
Query: 416 VAKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAK 475
V + +T+ + +A+G+ YL HRD+ A N+L+ + ++ADFGLA+
Sbjct: 195 VPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 251
Query: 476 QSREGQSHLTTRVAGTHG-----YLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDL 530
+ T T+G ++APE T +SDV+SFGV++ EI
Sbjct: 252 DINNIDYYKKT----TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI--------F 299
Query: 531 STSGSPRACLITDWVWSLVKAG 552
+ GSP + + ++ L+K G
Sbjct: 300 TLGGSPYPGIPVEELFKLLKEG 321
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 112/229 (48%), Gaps = 42/229 (18%)
Query: 322 GRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISN--LKHRNLVPLRGCCV 379
RG FG V+K L + VAVK D Q + +E EI S +KH NL+
Sbjct: 24 ARGRFGCVWKAQLMN-DFVAVKIFPLQDKQS---WQSEREIFSTPGMKHENLLQFIAA-- 77
Query: 380 VDGDNERGS----ERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAK 435
+RGS E +L+ + G++ D+L + +TW + ++ +++
Sbjct: 78 ----EKRGSNLEVELWLITAFHDKGSLTDYLKGNI----------ITWNELCHVAETMSR 123
Query: 436 GLAYLHY--------GVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
GL+YLH G KP+I HRD K+ N+LL +D+ A +ADFGLA + G+ T
Sbjct: 124 GLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTH 183
Query: 488 -VAGTHGYLAPEYALYGQLTEKS------DVYSFGVVILEIMCGRKALD 529
GT Y+APE L G + + D+Y+ G+V+ E++ KA D
Sbjct: 184 GQVGTRRYMAPE-VLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAAD 231
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 97/189 (51%), Gaps = 18/189 (9%)
Query: 337 GTTVAVKKVI-ESDFQGDAEFCNEVEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYD 395
G VAVK + ES A+ E+EI+ NL H N+V +G C DG G+ L+ +
Sbjct: 50 GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDG----GNGIKLIME 105
Query: 396 YMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKA 455
++P+G++ ++L + K + Q+ + + KG+ YL G + + HRD+ A
Sbjct: 106 FLPSGSLKEYLPKN--------KNKINLKQQLKYAVQICKGMDYL--GSRQYV-HRDLAA 154
Query: 456 TNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHG--YLAPEYALYGQLTEKSDVYS 513
N+L++++ + ++ DFGL K + T + + APE + + SDV+S
Sbjct: 155 RNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWS 214
Query: 514 FGVVILEIM 522
FGV + E++
Sbjct: 215 FGVTLHELL 223
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 124/266 (46%), Gaps = 43/266 (16%)
Query: 309 ERATDKFSQKNFIGRGGFGLVYK----GILQD----GTTVAVKKVIESDFQGD-AEFCNE 359
E DK + +G G FG V GI +D TVAVK + + + D ++ +E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 360 VEIISNL-KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLF----PSFN--- 411
+E++ + KH+N++ L G C DG Y++ Y GN+ ++L P
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDG------PLYVIVAYASKGNLREYLRARRPPGMEYSY 144
Query: 412 DGSGVAKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADF 471
D + V + +T+ + +A+G+ YL HRD+ A N+L+ + ++ADF
Sbjct: 145 DINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADF 201
Query: 472 GLAKQSREGQSHLTTRVAGTHG-----YLAPEYALYGQLTEKSDVYSFGVVILEIMCGRK 526
GLA+ + T T+G ++APE T +SDV+SFGV++ EI
Sbjct: 202 GLARDINNIDYYKKT----TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI----- 252
Query: 527 ALDLSTSGSPRACLITDWVWSLVKAG 552
+ GSP + + ++ L+K G
Sbjct: 253 ---FTLGGSPYPGIPVEELFKLLKEG 275
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 124/266 (46%), Gaps = 43/266 (16%)
Query: 309 ERATDKFSQKNFIGRGGFGLVYK----GILQD----GTTVAVKKVIESDFQGD-AEFCNE 359
E DK + +G G FG V GI +D TVAVK + + + D ++ +E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 360 VEIISNL-KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLF----PSFN--- 411
+E++ + KH+N++ L G C DG Y++ Y GN+ ++L P
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDG------PLYVIVGYASKGNLREYLRARRPPGMEYSY 144
Query: 412 DGSGVAKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADF 471
D + V + +T+ + +A+G+ YL HRD+ A N+L+ + ++ADF
Sbjct: 145 DINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADF 201
Query: 472 GLAKQSREGQSHLTTRVAGTHG-----YLAPEYALYGQLTEKSDVYSFGVVILEIMCGRK 526
GLA+ + T T+G ++APE T +SDV+SFGV++ EI
Sbjct: 202 GLARDINNIDYYKKT----TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI----- 252
Query: 527 ALDLSTSGSPRACLITDWVWSLVKAG 552
+ GSP + + ++ L+K G
Sbjct: 253 ---FTLGGSPYPGIPVEELFKLLKEG 275
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 93/201 (46%), Gaps = 18/201 (8%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPLRGCCVV 380
+G G FG+V G + VA+K + E D EF E +++ NL H LV L G C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLYGVCT- 89
Query: 381 DGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLAYL 440
+ +++ +YM NG + ++L + Q + DV + + YL
Sbjct: 90 -----KQRPIFIITEYMANGCLLNYLRE--------MRHRFQTQQLLEMCKDVCEAMEYL 136
Query: 441 HYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGYLAPEYA 500
HRD+ A N L++ +V+DFGL++ + + + + PE
Sbjct: 137 E---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVL 193
Query: 501 LYGQLTEKSDVYSFGVVILEI 521
+Y + + KSD+++FGV++ EI
Sbjct: 194 MYSKFSSKSDIWAFGVLMWEI 214
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 100/213 (46%), Gaps = 30/213 (14%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIES-----DFQGDAEFCNEVEIISNLKHRNLVPLR 375
IGRG FG VY G L D + ++S D ++F E I+ + H N++ L
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 376 GCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNII---LD 432
G C+ GS +V YM +G++ + + ++ P K++I L
Sbjct: 96 GICL----RSEGSP-LVVLPYMKHGDLRNFIRNETHN-----------PTVKDLIGFGLQ 139
Query: 433 VAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ---SHLTTRVA 489
VAKG+ +L HRD+ A N +LD +VADFGLA+ + + H T
Sbjct: 140 VAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAK 196
Query: 490 GTHGYLAPEYALYGQLTEKSDVYSFGVVILEIM 522
++A E + T KSDV+SFGV++ E+M
Sbjct: 197 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 229
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 100/213 (46%), Gaps = 30/213 (14%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIES-----DFQGDAEFCNEVEIISNLKHRNLVPLR 375
IGRG FG VY G L D + ++S D ++F E I+ + H N++ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 376 GCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNII---LD 432
G C+ GS +V YM +G++ + + ++ P K++I L
Sbjct: 98 GICL----RSEGSP-LVVLPYMKHGDLRNFIRNETHN-----------PTVKDLIGFGLQ 141
Query: 433 VAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ---SHLTTRVA 489
VAKG+ +L HRD+ A N +LD +VADFGLA+ + + H T
Sbjct: 142 VAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAK 198
Query: 490 GTHGYLAPEYALYGQLTEKSDVYSFGVVILEIM 522
++A E + T KSDV+SFGV++ E+M
Sbjct: 199 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 231
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 109/232 (46%), Gaps = 34/232 (14%)
Query: 307 DLERATDKFSQKNFIGRGGFGLVY----KGILQDG--TTVAVKKVIES-DFQGDAEFCNE 359
+ E A +K + +G+G FG+VY KG+++D T VA+K V E+ + EF NE
Sbjct: 4 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 63
Query: 360 VEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLF---PSFNDGSGV 416
++ ++V L G +G ++ + M G++ +L P + +
Sbjct: 64 ASVMKEFNCHHVVRLLGVV------SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 117
Query: 417 AKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQ 476
A P + + + ++A G+AYL+ HRD+ A N ++ D ++ DFG+ +
Sbjct: 118 A--PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRD 172
Query: 477 SRE-------GQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEI 521
E G+ L R +++PE G T SDV+SFGVV+ EI
Sbjct: 173 IXETDXXRKGGKGLLPVR------WMSPESLKDGVFTTYSDVWSFGVVLWEI 218
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 100/213 (46%), Gaps = 30/213 (14%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIES-----DFQGDAEFCNEVEIISNLKHRNLVPLR 375
IGRG FG VY G L D + ++S D ++F E I+ + H N++ L
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 156
Query: 376 GCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNII---LD 432
G C+ GS +V YM +G++ + + ++ P K++I L
Sbjct: 157 GICL----RSEGSP-LVVLPYMKHGDLRNFIRNETHN-----------PTVKDLIGFGLQ 200
Query: 433 VAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ---SHLTTRVA 489
VAKG+ +L HRD+ A N +LD +VADFGLA+ + + H T
Sbjct: 201 VAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAK 257
Query: 490 GTHGYLAPEYALYGQLTEKSDVYSFGVVILEIM 522
++A E + T KSDV+SFGV++ E+M
Sbjct: 258 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 290
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 111/232 (47%), Gaps = 48/232 (20%)
Query: 321 IGRGGFGLVYK----GIL--QDGTTVAVKKVIE---SDFQGDAEFCNEVEIISNLKHRNL 371
IG G FG V++ G+L + T VAVK + E +D Q D F E +++ + N+
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQAD--FQREAALMAEFDNPNI 112
Query: 372 VPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFP---------SFNDGSGVAK---- 418
V L G C V G L+++YM G++++ L S +D S A+
Sbjct: 113 VKLLGVCAV------GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSP 166
Query: 419 --RPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQ 476
PL+ ++ I VA G+AYL + HRD+ N L+ +M ++ADFGL++
Sbjct: 167 GPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRN 223
Query: 477 -------SREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEI 521
+G + R ++ PE Y + T +SDV+++GVV+ EI
Sbjct: 224 IYSADYYKADGNDAIPIR------WMPPESIFYNRYTTESDVWAYGVVLWEI 269
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 100/213 (46%), Gaps = 30/213 (14%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIES-----DFQGDAEFCNEVEIISNLKHRNLVPLR 375
IGRG FG VY G L D + ++S D ++F E I+ + H N++ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 376 GCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNII---LD 432
G C+ GS +V YM +G++ + + ++ P K++I L
Sbjct: 98 GICL----RSEGSP-LVVLPYMKHGDLRNFIRNETHN-----------PTVKDLIGFGLQ 141
Query: 433 VAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ---SHLTTRVA 489
VAKG+ +L HRD+ A N +LD +VADFGLA+ + + H T
Sbjct: 142 VAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAK 198
Query: 490 GTHGYLAPEYALYGQLTEKSDVYSFGVVILEIM 522
++A E + T KSDV+SFGV++ E+M
Sbjct: 199 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 231
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 105/207 (50%), Gaps = 24/207 (11%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAE-FCNEVEIISNLKHRNLVPLRGCCV 379
+G G FG VYK ++ +A KVIE+ + + E + E+EI++ H +V L G
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 380 VDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLAY 439
DG + +++ ++ P G VD + R LT PQ + + + + L +
Sbjct: 79 HDG------KLWIMIEFCPGGAVDAIMLE--------LDRGLTEPQIQVVCRQMLEALNF 124
Query: 440 LHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGYLAPEY 499
LH I HRD+KA N+L+ + R+ADFG++ ++ + + + GT ++APE
Sbjct: 125 LH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI-GTPYWMAPEV 180
Query: 500 ALYGQLTE-----KSDVYSFGVVILEI 521
+ + + K+D++S G+ ++E+
Sbjct: 181 VMCETMKDTPYDYKADIWSLGITLIEM 207
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 106/212 (50%), Gaps = 25/212 (11%)
Query: 319 NFIGRGGFGLVYKGI-LQDGTTVAVK---KVIE--SDFQGDAEFCNEVEIISNLKHRNLV 372
+G G FG V+KG+ + +G ++ + KVIE S Q + + I +L H ++V
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 96
Query: 373 PLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILD 432
L G C GS LV Y+P G++ DH+ + G+ + L W +
Sbjct: 97 RLLGLC-------PGSSLQLVTQYLPLGSLLDHV--RQHRGALGPQLLLNWG------VQ 141
Query: 433 VAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTH 492
+AKG+ YL + + HR++ A N+LL + + +VADFG+A L A T
Sbjct: 142 IAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTP 198
Query: 493 -GYLAPEYALYGQLTEKSDVYSFGVVILEIMC 523
++A E +G+ T +SDV+S+GV + E+M
Sbjct: 199 IKWMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 100/213 (46%), Gaps = 30/213 (14%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIES-----DFQGDAEFCNEVEIISNLKHRNLVPLR 375
IGRG FG VY G L D + ++S D ++F E I+ + H N++ L
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 102
Query: 376 GCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNII---LD 432
G C+ GS +V YM +G++ + + ++ P K++I L
Sbjct: 103 GICL----RSEGSP-LVVLPYMKHGDLRNFIRNETHN-----------PTVKDLIGFGLQ 146
Query: 433 VAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ---SHLTTRVA 489
VAKG+ +L HRD+ A N +LD +VADFGLA+ + + H T
Sbjct: 147 VAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAK 203
Query: 490 GTHGYLAPEYALYGQLTEKSDVYSFGVVILEIM 522
++A E + T KSDV+SFGV++ E+M
Sbjct: 204 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 236
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 100/213 (46%), Gaps = 30/213 (14%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIES-----DFQGDAEFCNEVEIISNLKHRNLVPLR 375
IGRG FG VY G L D + ++S D ++F E I+ + H N++ L
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 376 GCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNII---LD 432
G C+ GS +V YM +G++ + + ++ P K++I L
Sbjct: 99 GICL----RSEGSP-LVVLPYMKHGDLRNFIRNETHN-----------PTVKDLIGFGLQ 142
Query: 433 VAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ---SHLTTRVA 489
VAKG+ +L HRD+ A N +LD +VADFGLA+ + + H T
Sbjct: 143 VAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAK 199
Query: 490 GTHGYLAPEYALYGQLTEKSDVYSFGVVILEIM 522
++A E + T KSDV+SFGV++ E+M
Sbjct: 200 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 232
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 97/213 (45%), Gaps = 22/213 (10%)
Query: 315 FSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIE--SDFQGDAEFCNEVEIISNLKHRNLV 372
F++ IG+G FG V+KGI V K+I+ + E+ ++S +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 373 PLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILD 432
G + D ++ +++ +Y+ G+ D L P PL Q I+ +
Sbjct: 84 KYYGSYLKD------TKLWIIMEYLGGGSALDLLEPG----------PLDETQIATILRE 127
Query: 433 VAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTH 492
+ KGL YLH K HRDIKA N+LL ++ADFG+A Q + Q V GT
Sbjct: 128 ILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV-GTP 183
Query: 493 GYLAPEYALYGQLTEKSDVYSFGVVILEIMCGR 525
++APE K+D++S G+ +E+ G
Sbjct: 184 FWMAPEVIKQSAYDSKADIWSLGITAIELARGE 216
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 100/213 (46%), Gaps = 30/213 (14%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIES-----DFQGDAEFCNEVEIISNLKHRNLVPLR 375
IGRG FG VY G L D + ++S D ++F E I+ + H N++ L
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 376 GCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNII---LD 432
G C+ GS +V YM +G++ + + ++ P K++I L
Sbjct: 99 GICL----RSEGSP-LVVLPYMKHGDLRNFIRNETHN-----------PTVKDLIGFGLQ 142
Query: 433 VAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ---SHLTTRVA 489
VAKG+ +L HRD+ A N +LD +VADFGLA+ + + H T
Sbjct: 143 VAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAK 199
Query: 490 GTHGYLAPEYALYGQLTEKSDVYSFGVVILEIM 522
++A E + T KSDV+SFGV++ E+M
Sbjct: 200 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 232
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 97/213 (45%), Gaps = 22/213 (10%)
Query: 315 FSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIE--SDFQGDAEFCNEVEIISNLKHRNLV 372
F++ IG+G FG V+KGI V K+I+ + E+ ++S +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 373 PLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILD 432
G + D ++ +++ +Y+ G+ D L P PL Q I+ +
Sbjct: 69 KYYGSYLKD------TKLWIIMEYLGGGSALDLLEPG----------PLDETQIATILRE 112
Query: 433 VAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTH 492
+ KGL YLH K HRDIKA N+LL ++ADFG+A Q + Q V GT
Sbjct: 113 ILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV-GTP 168
Query: 493 GYLAPEYALYGQLTEKSDVYSFGVVILEIMCGR 525
++APE K+D++S G+ +E+ G
Sbjct: 169 FWMAPEVIKQSAYDSKADIWSLGITAIELARGE 201
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 105/207 (50%), Gaps = 24/207 (11%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAE-FCNEVEIISNLKHRNLVPLRGCCV 379
+G G FG VYK ++ +A KVIE+ + + E + E+EI++ H +V L G
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 380 VDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLAY 439
DG + +++ ++ P G VD + R LT PQ + + + + L +
Sbjct: 87 HDG------KLWIMIEFCPGGAVDAIMLE--------LDRGLTEPQIQVVCRQMLEALNF 132
Query: 440 LHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGYLAPEY 499
LH I HRD+KA N+L+ + R+ADFG++ ++ + + + GT ++APE
Sbjct: 133 LH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI-GTPYWMAPEV 188
Query: 500 ALYGQLTE-----KSDVYSFGVVILEI 521
+ + + K+D++S G+ ++E+
Sbjct: 189 VMCETMKDTPYDYKADIWSLGITLIEM 215
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 109/232 (46%), Gaps = 34/232 (14%)
Query: 307 DLERATDKFSQKNFIGRGGFGLVY----KGILQDG--TTVAVKKVIES-DFQGDAEFCNE 359
+ E A +K + +G+G FG+VY KG+++D T VA+K V E+ + EF NE
Sbjct: 13 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 72
Query: 360 VEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLF---PSFNDGSGV 416
++ ++V L G +G ++ + M G++ +L P + +
Sbjct: 73 ASVMKEFNCHHVVRLLGVV------SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 126
Query: 417 AKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQ 476
A P + + + ++A G+AYL+ HRD+ A N ++ D ++ DFG+ +
Sbjct: 127 A--PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRD 181
Query: 477 SRE-------GQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEI 521
E G+ L R +++PE G T SDV+SFGVV+ EI
Sbjct: 182 IXETDXXRKGGKGLLPVR------WMSPESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 106/212 (50%), Gaps = 25/212 (11%)
Query: 319 NFIGRGGFGLVYKGI-LQDGTTVAVK---KVIE--SDFQGDAEFCNEVEIISNLKHRNLV 372
+G G FG V+KG+ + +G ++ + KVIE S Q + + I +L H ++V
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 373 PLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILD 432
L G C GS LV Y+P G++ DH+ + G+ + L W +
Sbjct: 79 RLLGLC-------PGSSLQLVTQYLPLGSLLDHV--RQHRGALGPQLLLNWG------VQ 123
Query: 433 VAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTH 492
+AKG+ YL + + HR++ A N+LL + + +VADFG+A L A T
Sbjct: 124 IAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTP 180
Query: 493 -GYLAPEYALYGQLTEKSDVYSFGVVILEIMC 523
++A E +G+ T +SDV+S+GV + E+M
Sbjct: 181 IKWMALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 93/201 (46%), Gaps = 18/201 (8%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPLRGCCVV 380
+G G FG+V G + VA+K + E D EF E +++ NL H LV L G C
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLYGVCT- 73
Query: 381 DGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLAYL 440
+ +++ +YM NG + ++L + Q + DV + + YL
Sbjct: 74 -----KQRPIFIITEYMANGCLLNYLRE--------MRHRFQTQQLLEMCKDVCEAMEYL 120
Query: 441 HYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGYLAPEYA 500
HRD+ A N L++ +V+DFGL++ + + + + PE
Sbjct: 121 E---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVL 177
Query: 501 LYGQLTEKSDVYSFGVVILEI 521
+Y + + KSD+++FGV++ EI
Sbjct: 178 MYSKFSSKSDIWAFGVLMWEI 198
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 105/232 (45%), Gaps = 28/232 (12%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAE-------FCNEVEIISNLKHRNLVP 373
+G GG VY L + T + +K I++ F E F EV S L H+N+V
Sbjct: 19 LGGGGMSTVY---LAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVS 75
Query: 374 LRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDV 433
+ +D D E YLV +Y+ + +++ + G PL+ N +
Sbjct: 76 M-----IDVDEEDDC-YYLVMEYIEGPTLSEYI-----ESHG----PLSVDTAINFTNQI 120
Query: 434 AKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHG 493
G+ + H I HRDIK NIL+D++ ++ DFG+AK E T V GT
Sbjct: 121 LDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQ 177
Query: 494 YLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLSTSGSPRACLITDWV 545
Y +PE A E +D+YS G+V+ E++ G + T+ S I D V
Sbjct: 178 YFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSV 229
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 93/201 (46%), Gaps = 18/201 (8%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPLRGCCVV 380
+G G FG+V G + VA+K + E D EF E +++ NL H LV L G C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLYGVCT- 74
Query: 381 DGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLAYL 440
+ +++ +YM NG + ++L + Q + DV + + YL
Sbjct: 75 -----KQRPIFIITEYMANGCLLNYLRE--------MRHRFQTQQLLEMCKDVCEAMEYL 121
Query: 441 HYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGYLAPEYA 500
HRD+ A N L++ +V+DFGL++ + + + + PE
Sbjct: 122 E---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVL 178
Query: 501 LYGQLTEKSDVYSFGVVILEI 521
+Y + + KSD+++FGV++ EI
Sbjct: 179 MYSKFSSKSDIWAFGVLMWEI 199
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 110/236 (46%), Gaps = 34/236 (14%)
Query: 303 FKIQDLERATDKFSQKNFIGRGGFGLVY----KGILQDG--TTVAVKKVIES-DFQGDAE 355
F + E A +K + +G+G FG+VY KG+++D T VA+K V E+ + E
Sbjct: 6 FVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE 65
Query: 356 FCNEVEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLF---PSFND 412
F NE ++ ++V L G +G ++ + M G++ +L P +
Sbjct: 66 FLNEASVMKEFNCHHVVRLLGVV------SQGQPTLVIMELMTRGDLKSYLRSLRPEMEN 119
Query: 413 GSGVAKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFG 472
+A P + + + ++A G+AYL+ HRD+ A N ++ D ++ DFG
Sbjct: 120 NPVLA--PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFG 174
Query: 473 LAKQSRE-------GQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEI 521
+ + E G+ L R +++PE G T SDV+SFGVV+ EI
Sbjct: 175 MTRDIYETDYYRKGGKGLLPVR------WMSPESLKDGVFTTYSDVWSFGVVLWEI 224
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 93/201 (46%), Gaps = 18/201 (8%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPLRGCCVV 380
+G G FG+V G + VA+K + E D EF E +++ NL H LV L G C
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLYGVCT- 80
Query: 381 DGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLAYL 440
+ +++ +YM NG + ++L + Q + DV + + YL
Sbjct: 81 -----KQRPIFIITEYMANGCLLNYLRE--------MRHRFQTQQLLEMCKDVCEAMEYL 127
Query: 441 HYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGYLAPEYA 500
HRD+ A N L++ +V+DFGL++ + + + + PE
Sbjct: 128 E---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVL 184
Query: 501 LYGQLTEKSDVYSFGVVILEI 521
+Y + + KSD+++FGV++ EI
Sbjct: 185 MYSKFSSKSDIWAFGVLMWEI 205
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 93/201 (46%), Gaps = 18/201 (8%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPLRGCCVV 380
+G G FG+V G + VA+K + E D EF E +++ NL H LV L G C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLYGVCT- 89
Query: 381 DGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLAYL 440
+ +++ +YM NG + ++L + Q + DV + + YL
Sbjct: 90 -----KQRPIFIITEYMANGCLLNYLRE--------MRHRFQTQQLLEMCKDVCEAMEYL 136
Query: 441 HYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGYLAPEYA 500
HRD+ A N L++ +V+DFGL++ + + + + PE
Sbjct: 137 E---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVL 193
Query: 501 LYGQLTEKSDVYSFGVVILEI 521
+Y + + KSD+++FGV++ EI
Sbjct: 194 MYSKFSSKSDIWAFGVLMWEI 214
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 93/201 (46%), Gaps = 18/201 (8%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPLRGCCVV 380
+G G FG+V G + VA+K + E D EF E +++ NL H LV L G C
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLYGVCT- 69
Query: 381 DGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLAYL 440
+ +++ +YM NG + ++L + Q + DV + + YL
Sbjct: 70 -----KQRPIFIITEYMANGCLLNYLRE--------MRHRFQTQQLLEMCKDVCEAMEYL 116
Query: 441 HYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGYLAPEYA 500
HRD+ A N L++ +V+DFGL++ + + + + PE
Sbjct: 117 E---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVL 173
Query: 501 LYGQLTEKSDVYSFGVVILEI 521
+Y + + KSD+++FGV++ EI
Sbjct: 174 MYSKFSSKSDIWAFGVLMWEI 194
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 109/232 (46%), Gaps = 34/232 (14%)
Query: 307 DLERATDKFSQKNFIGRGGFGLVY----KGILQDG--TTVAVKKVIES-DFQGDAEFCNE 359
+ E A +K + +G+G FG+VY KG+++D T VA+K V E+ + EF NE
Sbjct: 12 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 71
Query: 360 VEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLF---PSFNDGSGV 416
++ ++V L G +G ++ + M G++ +L P + +
Sbjct: 72 ASVMKEFNCHHVVRLLGVV------SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 125
Query: 417 AKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQ 476
A P + + + ++A G+AYL+ HRD+ A N ++ D ++ DFG+ +
Sbjct: 126 A--PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRD 180
Query: 477 SRE-------GQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEI 521
E G+ L R +++PE G T SDV+SFGVV+ EI
Sbjct: 181 IYETDYYRKGGKGLLPVR------WMSPESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 109/232 (46%), Gaps = 34/232 (14%)
Query: 307 DLERATDKFSQKNFIGRGGFGLVY----KGILQDG--TTVAVKKVIES-DFQGDAEFCNE 359
+ E A +K + +G+G FG+VY KG+++D T VA+K V E+ + EF NE
Sbjct: 12 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 71
Query: 360 VEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLF---PSFNDGSGV 416
++ ++V L G +G ++ + M G++ +L P + +
Sbjct: 72 ASVMKEFNCHHVVRLLGVV------SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 125
Query: 417 AKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQ 476
A P + + + ++A G+AYL+ HRD+ A N ++ D ++ DFG+ +
Sbjct: 126 A--PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRD 180
Query: 477 SRE-------GQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEI 521
E G+ L R +++PE G T SDV+SFGVV+ EI
Sbjct: 181 IYETDYYRKGGKGLLPVR------WMSPESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 109/232 (46%), Gaps = 34/232 (14%)
Query: 307 DLERATDKFSQKNFIGRGGFGLVY----KGILQDG--TTVAVKKVIES-DFQGDAEFCNE 359
+ E A +K + +G+G FG+VY KG+++D T VA+K V E+ + EF NE
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 65
Query: 360 VEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLF---PSFNDGSGV 416
++ ++V L G +G ++ + M G++ +L P + +
Sbjct: 66 ASVMKEFNCHHVVRLLGVV------SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 119
Query: 417 AKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQ 476
A P + + + ++A G+AYL+ HRD+ A N ++ D ++ DFG+ +
Sbjct: 120 A--PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRD 174
Query: 477 SRE-------GQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEI 521
E G+ L R +++PE G T SDV+SFGVV+ EI
Sbjct: 175 IYETDYYRKGGKGLLPVR------WMSPESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 109/232 (46%), Gaps = 34/232 (14%)
Query: 307 DLERATDKFSQKNFIGRGGFGLVY----KGILQDG--TTVAVKKVIES-DFQGDAEFCNE 359
+ E A +K + +G+G FG+VY KG+++D T VA+K V E+ + EF NE
Sbjct: 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 78
Query: 360 VEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLF---PSFNDGSGV 416
++ ++V L G +G ++ + M G++ +L P + +
Sbjct: 79 ASVMKEFNCHHVVRLLGVV------SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 132
Query: 417 AKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQ 476
A P + + + ++A G+AYL+ HRD+ A N ++ D ++ DFG+ +
Sbjct: 133 A--PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRD 187
Query: 477 SRE-------GQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEI 521
E G+ L R +++PE G T SDV+SFGVV+ EI
Sbjct: 188 IYETDYYRKGGKGLLPVR------WMSPESLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 110/232 (47%), Gaps = 34/232 (14%)
Query: 307 DLERATDKFSQKNFIGRGGFGLVY----KGILQDG--TTVAVKKVIES-DFQGDAEFCNE 359
+ E A +K + +G+G FG+VY KG+++D T VA+K V E+ + EF NE
Sbjct: 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 78
Query: 360 VEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLF---PSFNDGSGV 416
++ ++V L G +G ++ + M G++ +L P+ + +
Sbjct: 79 ASVMKEFNCHHVVRLLGVV------SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVL 132
Query: 417 AKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQ 476
A P + + + ++A G+AYL+ HRD+ A N ++ D ++ DFG+ +
Sbjct: 133 A--PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRD 187
Query: 477 SRE-------GQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEI 521
E G+ L R +++PE G T SDV+SFGVV+ EI
Sbjct: 188 IYETDYYRKGGKGLLPVR------WMSPESLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 110/232 (47%), Gaps = 34/232 (14%)
Query: 307 DLERATDKFSQKNFIGRGGFGLVY----KGILQDG--TTVAVKKVIES-DFQGDAEFCNE 359
+ E A +K + +G+G FG+VY KG+++D T VA+K V E+ + EF NE
Sbjct: 9 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 68
Query: 360 VEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLF---PSFNDGSGV 416
++ ++V L G +G ++ + M G++ +L P+ + +
Sbjct: 69 ASVMKEFNCHHVVRLLGVV------SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVL 122
Query: 417 AKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQ 476
A P + + + ++A G+AYL+ HRD+ A N ++ D ++ DFG+ +
Sbjct: 123 A--PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRD 177
Query: 477 SRE-------GQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEI 521
E G+ L R +++PE G T SDV+SFGVV+ EI
Sbjct: 178 IYETDYYRKGGKGLLPVR------WMSPESLKDGVFTTYSDVWSFGVVLWEI 223
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 109/232 (46%), Gaps = 34/232 (14%)
Query: 307 DLERATDKFSQKNFIGRGGFGLVY----KGILQDG--TTVAVKKVIES-DFQGDAEFCNE 359
+ E A +K + +G+G FG+VY KG+++D T VA+K V E+ + EF NE
Sbjct: 13 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 72
Query: 360 VEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLF---PSFNDGSGV 416
++ ++V L G +G ++ + M G++ +L P + +
Sbjct: 73 ASVMKEFNCHHVVRLLGVV------SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 126
Query: 417 AKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQ 476
A P + + + ++A G+AYL+ HRD+ A N ++ D ++ DFG+ +
Sbjct: 127 A--PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRD 181
Query: 477 SRE-------GQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEI 521
E G+ L R +++PE G T SDV+SFGVV+ EI
Sbjct: 182 IYETDYYRKGGKGLLPVR------WMSPESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 93/201 (46%), Gaps = 18/201 (8%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPLRGCCVV 380
+G G FG+V G + VA+K + E D EF E +++ NL H LV L G C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLYGVCT- 74
Query: 381 DGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLAYL 440
+ +++ +YM NG + ++L + Q + DV + + YL
Sbjct: 75 -----KQRPIFIITEYMANGCLLNYLRE--------MRHRFQTQQLLEMCKDVCEAMEYL 121
Query: 441 HYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGYLAPEYA 500
HRD+ A N L++ +V+DFGL++ + + + + PE
Sbjct: 122 E---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVL 178
Query: 501 LYGQLTEKSDVYSFGVVILEI 521
+Y + + KSD+++FGV++ EI
Sbjct: 179 MYSKFSSKSDIWAFGVLMWEI 199
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 97/213 (45%), Gaps = 22/213 (10%)
Query: 315 FSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIE--SDFQGDAEFCNEVEIISNLKHRNLV 372
F++ IG+G FG V+KGI V K+I+ + E+ ++S +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 373 PLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILD 432
G + +GS+ +++ +Y+ G+ D L P Q ++ +
Sbjct: 85 KYYGSYL------KGSKLWIIMEYLGGGSALDLLRAG----------PFDEFQIATMLKE 128
Query: 433 VAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTH 492
+ KGL YLH K HRDIKA N+LL ++ADFG+A Q + Q T V GT
Sbjct: 129 ILKGLDYLHSEKK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV-GTP 184
Query: 493 GYLAPEYALYGQLTEKSDVYSFGVVILEIMCGR 525
++APE K+D++S G+ +E+ G
Sbjct: 185 FWMAPEVIQQSAYDSKADIWSLGITAIELAKGE 217
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 109/232 (46%), Gaps = 34/232 (14%)
Query: 307 DLERATDKFSQKNFIGRGGFGLVY----KGILQDG--TTVAVKKVIES-DFQGDAEFCNE 359
+ E A +K + +G+G FG+VY KG+++D T VA+K V E+ + EF NE
Sbjct: 41 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 100
Query: 360 VEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLF---PSFNDGSGV 416
++ ++V L G +G ++ + M G++ +L P + +
Sbjct: 101 ASVMKEFNCHHVVRLLGVV------SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 154
Query: 417 AKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQ 476
A P + + + ++A G+AYL+ HRD+ A N ++ D ++ DFG+ +
Sbjct: 155 A--PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRD 209
Query: 477 SRE-------GQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEI 521
E G+ L R +++PE G T SDV+SFGVV+ EI
Sbjct: 210 IYETDYYRKGGKGLLPVR------WMSPESLKDGVFTTYSDVWSFGVVLWEI 255
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 105/233 (45%), Gaps = 34/233 (14%)
Query: 296 PNTGSIWFKIQDLERATDKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQGDA 354
P+ ++FK D E+ FS IG G FG VY +++ VA+KK+ S Q +
Sbjct: 41 PDVAELFFK-DDPEKL---FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNE 96
Query: 355 EF---CNEVEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFN 411
++ EV + L+H N + RGC + R +LV +Y S +
Sbjct: 97 KWQDIIKEVRFLQKLRHPNTIQYRGCYL------REHTAWLVMEY---------CLGSAS 141
Query: 412 DGSGVAKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADF 471
D V K+PL + + +GLAYLH + HRD+KA NILL ++ DF
Sbjct: 142 DLLEVHKKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDF 198
Query: 472 GLAKQSREGQSHLTTRVAGTHGYLAPEYAL---YGQLTEKSDVYSFGVVILEI 521
G A + GT ++APE L GQ K DV+S G+ +E+
Sbjct: 199 GSASIMAPANXFV-----GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 246
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 99/205 (48%), Gaps = 24/205 (11%)
Query: 321 IGRGGFGLVYKGILQ-DGTTVAVKKVIES---DFQGDAEFCNEVEIISNLKHRNLVPLRG 376
IGRG FG V+ G L+ D T VAVK E+ D + A+F E I+ H N+V L G
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLK--AKFLQEARILKQYSHPNIVRLIG 179
Query: 377 CCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKG 436
C + Y+V + + G+ F +F G R T Q ++ D A G
Sbjct: 180 VCT------QKQPIYIVMELVQGGD-----FLTFLRTEGARLRVKTLLQ---MVGDAAAG 225
Query: 437 LAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTH-GYL 495
+ YL HRD+ A N L+ +++DFG++++ +G + + +
Sbjct: 226 MEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWT 282
Query: 496 APEYALYGQLTEKSDVYSFGVVILE 520
APE YG+ + +SDV+SFG+++ E
Sbjct: 283 APEALNYGRYSSESDVWSFGILLWE 307
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 104/233 (44%), Gaps = 34/233 (14%)
Query: 296 PNTGSIWFKIQDLERATDKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQGDA 354
P+ ++FK D E+ FS IG G FG VY +++ VA+KK+ S Q +
Sbjct: 2 PDVAELFFK-DDPEKL---FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNE 57
Query: 355 EF---CNEVEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFN 411
++ EV + L+H N + RGC + R +LV +Y S +
Sbjct: 58 KWQDIIKEVRFLQKLRHPNTIQYRGCYL------REHTAWLVMEY---------CLGSAS 102
Query: 412 DGSGVAKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADF 471
D V K+PL + + +GLAYLH + HRD+KA NILL ++ DF
Sbjct: 103 DLLEVHKKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDF 159
Query: 472 GLAKQSREGQSHLTTRVAGTHGYLAPEYAL---YGQLTEKSDVYSFGVVILEI 521
G A GT ++APE L GQ K DV+S G+ +E+
Sbjct: 160 GSASIMAPA-----NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 207
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 109/234 (46%), Gaps = 35/234 (14%)
Query: 306 QDLERATDKFSQK---------NFIGRGGFGLVYKGILQ----DGTTVAVK--KVIESDF 350
+D RA +F+++ IG G FG V G L+ VA+K KV ++
Sbjct: 27 EDPNRAVHQFAKELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEK 86
Query: 351 QGDAEFCNEVEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSF 410
Q +F E I+ H N+V L G RG +V ++M NG +D F
Sbjct: 87 Q-RRDFLCEASIMGQFDHPNVVHLEGVVT------RGKPVMIVIEFMENGALD--AFLRK 137
Query: 411 NDGSGVAKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVAD 470
+DG T Q ++ +A G+ YL HRD+ A NIL+++++ +V+D
Sbjct: 138 HDGQ------FTVIQLVGMLRGIAAGMRYL---ADMGYVHRDLAARNILVNSNLVCKVSD 188
Query: 471 FGLAKQSREGQSHLTTRVAGT--HGYLAPEYALYGQLTEKSDVYSFGVVILEIM 522
FGL++ + + T G + APE Y + T SDV+S+G+V+ E+M
Sbjct: 189 FGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVM 242
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 107/233 (45%), Gaps = 32/233 (13%)
Query: 299 GSIWFKIQDLERATDKFSQKNFIGRGGFGLVYKGILQDGTT---VAVKKVIESDFQG-DA 354
G W + +D+ D + ++ +G G F V + +D T VA+K + + +G +
Sbjct: 7 GPRWKQAEDIR---DIYDFRDVLGTGAFSEVI--LAEDKRTQKLVAIKCIAKEALEGKEG 61
Query: 355 EFCNEVEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGS 414
NE+ ++ +KH N+V L D E G YL+ + G + D +
Sbjct: 62 SMENEIAVLHKIKHPNIVAL------DDIYESGGHLYLIMQLVSGGELFDRI-------- 107
Query: 415 GVAKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNIL---LDADMRARVADF 471
V K T +I V + YLH I HRD+K N+L LD D + ++DF
Sbjct: 108 -VEKGFYTERDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDF 163
Query: 472 GLAKQSREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
GL+K G S L+T GT GY+APE ++ D +S GV+ ++CG
Sbjct: 164 GLSKMEDPG-SVLST-ACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 107/233 (45%), Gaps = 32/233 (13%)
Query: 299 GSIWFKIQDLERATDKFSQKNFIGRGGFGLVYKGILQDGTT---VAVKKVIESDFQG-DA 354
G W + +D+ D + ++ +G G F V + +D T VA+K + + +G +
Sbjct: 7 GPRWKQAEDIR---DIYDFRDVLGTGAFSEVI--LAEDKRTQKLVAIKCIAKEALEGKEG 61
Query: 355 EFCNEVEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGS 414
NE+ ++ +KH N+V L D E G YL+ + G + D +
Sbjct: 62 SMENEIAVLHKIKHPNIVAL------DDIYESGGHLYLIMQLVSGGELFDRI-------- 107
Query: 415 GVAKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNIL---LDADMRARVADF 471
V K T +I V + YLH I HRD+K N+L LD D + ++DF
Sbjct: 108 -VEKGFYTERDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDF 163
Query: 472 GLAKQSREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
GL+K G S L+T GT GY+APE ++ D +S GV+ ++CG
Sbjct: 164 GLSKMEDPG-SVLST-ACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 107/233 (45%), Gaps = 32/233 (13%)
Query: 299 GSIWFKIQDLERATDKFSQKNFIGRGGFGLVYKGILQDGTT---VAVKKVIESDFQG-DA 354
G W + +D+ D + ++ +G G F V + +D T VA+K + + +G +
Sbjct: 7 GPRWKQAEDIR---DIYDFRDVLGTGAFSEVI--LAEDKRTQKLVAIKCIAKEALEGKEG 61
Query: 355 EFCNEVEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGS 414
NE+ ++ +KH N+V L D E G YL+ + G + D +
Sbjct: 62 SMENEIAVLHKIKHPNIVAL------DDIYESGGHLYLIMQLVSGGELFDRI-------- 107
Query: 415 GVAKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNIL---LDADMRARVADF 471
V K T +I V + YLH I HRD+K N+L LD D + ++DF
Sbjct: 108 -VEKGFYTERDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDF 163
Query: 472 GLAKQSREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
GL+K G S L+T GT GY+APE ++ D +S GV+ ++CG
Sbjct: 164 GLSKMEDPG-SVLST-ACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 107/233 (45%), Gaps = 32/233 (13%)
Query: 299 GSIWFKIQDLERATDKFSQKNFIGRGGFGLVYKGILQDGTT---VAVKKVIESDFQG-DA 354
G W + +D+ D + ++ +G G F V + +D T VA+K + + +G +
Sbjct: 7 GPRWKQAEDIR---DIYDFRDVLGTGAFSEVI--LAEDKRTQKLVAIKCIAKKALEGKEG 61
Query: 355 EFCNEVEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGS 414
NE+ ++ +KH N+V L D E G YL+ + G + D +
Sbjct: 62 SMENEIAVLHKIKHPNIVAL------DDIYESGGHLYLIMQLVSGGELFDRI-------- 107
Query: 415 GVAKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNIL---LDADMRARVADF 471
V K T +I V + YLH I HRD+K N+L LD D + ++DF
Sbjct: 108 -VEKGFYTERDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDF 163
Query: 472 GLAKQSREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
GL+K G S L+T GT GY+APE ++ D +S GV+ ++CG
Sbjct: 164 GLSKMEDPG-SVLST-ACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 99/205 (48%), Gaps = 24/205 (11%)
Query: 321 IGRGGFGLVYKGILQ-DGTTVAVKKVIES---DFQGDAEFCNEVEIISNLKHRNLVPLRG 376
IGRG FG V+ G L+ D T VAVK E+ D + A+F E I+ H N+V L G
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLK--AKFLQEARILKQYSHPNIVRLIG 179
Query: 377 CCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKG 436
C + Y+V + + G+ F +F G R T Q ++ D A G
Sbjct: 180 VCT------QKQPIYIVMELVQGGD-----FLTFLRTEGARLRVKTLLQ---MVGDAAAG 225
Query: 437 LAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTH-GYL 495
+ YL HRD+ A N L+ +++DFG++++ +G + + +
Sbjct: 226 MEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWT 282
Query: 496 APEYALYGQLTEKSDVYSFGVVILE 520
APE YG+ + +SDV+SFG+++ E
Sbjct: 283 APEALNYGRYSSESDVWSFGILLWE 307
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 108/232 (46%), Gaps = 34/232 (14%)
Query: 307 DLERATDKFSQKNFIGRGGFGLVY----KGILQDG--TTVAVKKVIES-DFQGDAEFCNE 359
+ E A +K + +G+G FG+VY KG+++D T VA+K V E+ + EF NE
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 65
Query: 360 VEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLF---PSFNDGSGV 416
++ ++V L G +G ++ + M G++ +L P + +
Sbjct: 66 ASVMKEFNCHHVVRLLGVV------SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 119
Query: 417 AKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQ 476
A P + + + ++A G+AYL+ HRD+ A N + D ++ DFG+ +
Sbjct: 120 A--PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRD 174
Query: 477 SRE-------GQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEI 521
E G+ L R +++PE G T SDV+SFGVV+ EI
Sbjct: 175 IYETDYYRKGGKGLLPVR------WMSPESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 101/220 (45%), Gaps = 22/220 (10%)
Query: 312 TDKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQGDAEFC----NEVEIISNL 366
+D++ +G GG V+ L+D VAVK V+ +D D F E + + L
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVK-VLRADLARDPSFYLRFRREAQNAAAL 69
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQR 426
H +V + + + G Y+V +Y+ + D + + P+T +
Sbjct: 70 NHPAIVAVYDTG--EAETPAGPLPYIVMEYVDGVTLRDIVH---------TEGPMTPKRA 118
Query: 427 KNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHL-- 484
+I D + L + H I HRD+K NIL+ A +V DFG+A+ + + +
Sbjct: 119 IEVIADACQALNFSHQN---GIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQ 175
Query: 485 TTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
T V GT YL+PE A + +SDVYS G V+ E++ G
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 97/213 (45%), Gaps = 22/213 (10%)
Query: 315 FSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIE--SDFQGDAEFCNEVEIISNLKHRNLV 372
F++ + IG+G FG VYKGI V K+I+ + E+ ++S +
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 373 PLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILD 432
G + + ++ +++ +Y+ G+ D L P PL I+ +
Sbjct: 81 RYFGSYL------KSTKLWIIMEYLGGGSALDLLKPG----------PLEETYIATILRE 124
Query: 433 VAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTH 492
+ KGL YLH K HRDIKA N+LL ++ADFG+A Q + Q V GT
Sbjct: 125 ILKGLDYLHSERK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFV-GTP 180
Query: 493 GYLAPEYALYGQLTEKSDVYSFGVVILEIMCGR 525
++APE K+D++S G+ +E+ G
Sbjct: 181 FWMAPEVIKQSAYDFKADIWSLGITAIELAKGE 213
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 115/238 (48%), Gaps = 33/238 (13%)
Query: 298 TGSIWFK-IQDLERATDKFSQKNF------IGRGGFGLVYKGILQDGTTVAVKKVIESDF 350
T +++F+ ++ E T + ++F +G G FG VYK ++ + +A KVI++
Sbjct: 15 TENLYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKS 74
Query: 351 QGDAE-FCNEVEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPS 409
+ + E + E++I+++ H N+V L + + +++ ++ G VD +
Sbjct: 75 EEELEDYMVEIDILASCDHPNIVKLLDAFYYENN------LWILIEFCAGGAVDAVMLE- 127
Query: 410 FNDGSGVAKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVA 469
+RPLT Q + + L YLH I HRD+KA NIL D ++A
Sbjct: 128 -------LERPLTESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLA 177
Query: 470 DFGL-AKQSREGQSHLTTRVAGTHGYLAPEYALYGQLTE-----KSDVYSFGVVILEI 521
DFG+ AK +R Q GT ++APE + + K+DV+S G+ ++E+
Sbjct: 178 DFGVSAKNTRXIQRR--DSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 115/238 (48%), Gaps = 33/238 (13%)
Query: 298 TGSIWFK-IQDLERATDKFSQKNF------IGRGGFGLVYKGILQDGTTVAVKKVIESDF 350
T +++F+ ++ E T + ++F +G G FG VYK ++ + +A KVI++
Sbjct: 15 TENLYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKS 74
Query: 351 QGDAE-FCNEVEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPS 409
+ + E + E++I+++ H N+V L + + +++ ++ G VD +
Sbjct: 75 EEELEDYMVEIDILASCDHPNIVKLLDAFYYENN------LWILIEFCAGGAVDAVMLE- 127
Query: 410 FNDGSGVAKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVA 469
+RPLT Q + + L YLH I HRD+KA NIL D ++A
Sbjct: 128 -------LERPLTESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLA 177
Query: 470 DFGL-AKQSREGQSHLTTRVAGTHGYLAPEYALYGQLTE-----KSDVYSFGVVILEI 521
DFG+ AK +R Q GT ++APE + + K+DV+S G+ ++E+
Sbjct: 178 DFGVSAKNTRTIQRR--DSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 101/220 (45%), Gaps = 22/220 (10%)
Query: 312 TDKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQGDAEFC----NEVEIISNL 366
+D++ +G GG V+ L+D VAVK V+ +D D F E + + L
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVK-VLRADLARDPSFYLRFRREAQNAAAL 69
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQR 426
H +V + + + G Y+V +Y+ + D + + P+T +
Sbjct: 70 NHPAIVAVYDTG--EAETPAGPLPYIVMEYVDGVTLRDIVH---------TEGPMTPKRA 118
Query: 427 KNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTT 486
+I D + L + H I HRD+K NI++ A +V DFG+A+ + + +T
Sbjct: 119 IEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ 175
Query: 487 RVA--GTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
A GT YL+PE A + +SDVYS G V+ E++ G
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 104/228 (45%), Gaps = 29/228 (12%)
Query: 311 ATDKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQG---DAEFCNEVEIISNL 366
A + F +G+G FG VY Q +A+K + ++ + + + EVEI S+L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHL--FPSFNDGSGVAKRPLTWP 424
+H N++ L G + YL+ +Y P G V L F++ +R T+
Sbjct: 71 RHPNILRLYGYF------HDATRVYLILEYAPRGEVYKELQKLSKFDE-----QRTATY- 118
Query: 425 QRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHL 484
I ++A L+Y H + HRDIK N+LL + ++ADFG S S
Sbjct: 119 -----ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSR 167
Query: 485 TTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLST 532
T + GT YL PE EK D++S GV+ E + G+ + +T
Sbjct: 168 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 215
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 115/238 (48%), Gaps = 33/238 (13%)
Query: 298 TGSIWFK-IQDLERATDKFSQKNF------IGRGGFGLVYKGILQDGTTVAVKKVIESDF 350
T +++F+ ++ E T + ++F +G G FG VYK ++ + +A KVI++
Sbjct: 15 TENLYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKS 74
Query: 351 QGDAE-FCNEVEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPS 409
+ + E + E++I+++ H N+V L + + +++ ++ G VD +
Sbjct: 75 EEELEDYMVEIDILASCDHPNIVKLLDAFYYENN------LWILIEFCAGGAVDAVMLE- 127
Query: 410 FNDGSGVAKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVA 469
+RPLT Q + + L YLH I HRD+KA NIL D ++A
Sbjct: 128 -------LERPLTESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLA 177
Query: 470 DFGL-AKQSREGQSHLTTRVAGTHGYLAPEYALYGQLTE-----KSDVYSFGVVILEI 521
DFG+ AK +R Q GT ++APE + + K+DV+S G+ ++E+
Sbjct: 178 DFGVSAKNTRXIQRR--DXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 101/220 (45%), Gaps = 22/220 (10%)
Query: 312 TDKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQGDAEFC----NEVEIISNL 366
+D++ +G GG V+ L+D VAVK V+ +D D F E + + L
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVK-VLRADLARDPSFYLRFRREAQNAAAL 69
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQR 426
H +V + + + G Y+V +Y+ + D + + P+T +
Sbjct: 70 NHPAIVAVYDTG--EAETPAGPLPYIVMEYVDGVTLRDIVH---------TEGPMTPKRA 118
Query: 427 KNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTT 486
+I D + L + H I HRD+K NI++ A +V DFG+A+ + + +T
Sbjct: 119 IEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ 175
Query: 487 RVA--GTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
A GT YL+PE A + +SDVYS G V+ E++ G
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 112/225 (49%), Gaps = 14/225 (6%)
Query: 304 KIQDLERATDKFSQKNFIGRGGFGLVYKGIL--QDGTT--VAVK--KVIESDFQGDAEFC 357
K++D+ + +G G FG V +G L +DGT+ VAVK K+ S + EF
Sbjct: 25 KLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFL 84
Query: 358 NEVEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVA 417
+E + + H N++ L G C+ + ++ + ++ +M G++ +L S + +G
Sbjct: 85 SEAACMKDFSHPNVIRLLGVCI-EMSSQGIPKPMVILPFMKYGDLHTYLLYSRLE-TGPK 142
Query: 418 KRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQS 477
PL + ++D+A G+ YL HRD+ A N +L DM VADFGL+K+
Sbjct: 143 HIPLQTLLK--FMVDIALGMEYLS---NRNFLHRDLAARNCMLRDDMTVCVADFGLSKKI 197
Query: 478 REGQSHLTTRVAGTH-GYLAPEYALYGQLTEKSDVYSFGVVILEI 521
G + R+A ++A E T KSDV++FGV + EI
Sbjct: 198 YSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEI 242
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 103/214 (48%), Gaps = 26/214 (12%)
Query: 318 KNFIGRGGFGLVYKGILQ----DGTTVAVKKVIESDFQGDA-EFCNEVEIISNLKHRNLV 372
+ IG G FG V +G L+ + VA+K + + EF +E I+ +H N++
Sbjct: 19 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 78
Query: 373 PLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILD 432
L G ++ ++M NG +D L NDG T Q ++
Sbjct: 79 RLEGVVT------NSMPVMILTEFMENGALDSFL--RLNDGQ------FTVIQLVGMLRG 124
Query: 433 VAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSH--LTTRVAG 490
+A G+ YL + + HRD+ A NIL+++++ +V+DFGL++ E S T+ + G
Sbjct: 125 IASGMRYL---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGG 181
Query: 491 THG--YLAPEYALYGQLTEKSDVYSFGVVILEIM 522
+ APE + + T SD +S+G+V+ E+M
Sbjct: 182 KIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVM 215
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 113/242 (46%), Gaps = 31/242 (12%)
Query: 309 ERATDKFSQKNFIGRGGFGLV----YKGILQD-GTTVAVKKVIESDFQGDAEFCNEVEII 363
ER SQ +G+G FG V Y + + G VAVK++ S +F E++I+
Sbjct: 9 ERHLKYISQ---LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQIL 65
Query: 364 SNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTW 423
L +V RG G R S R LV +Y+P+G + D F + A R L +
Sbjct: 66 KALHSDFIVKYRGVSYGPG---RQSLR-LVMEYLPSGCLRD--FLQRHRARLDASRLLLY 119
Query: 424 PQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSH 483
+ + KG+ YL G + + HRD+ A NIL++++ ++ADFGLAK + +
Sbjct: 120 SSQ------ICKGMEYL--GSRRCV-HRDLAARNILVESEAHVKIADFGLAKLLPLDKDY 170
Query: 484 LTTRVAGTHG--YLAPEYALYGQLTEKSDVYSFGVVILEIM------CGRKALDLSTSGS 535
R G + APE + +SDV+SFGVV+ E+ C A L GS
Sbjct: 171 YVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGS 230
Query: 536 PR 537
R
Sbjct: 231 ER 232
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 99/226 (43%), Gaps = 38/226 (16%)
Query: 321 IGRGGFGLVYKGILQD-GTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPLRGCCV 379
+G+G FG K ++ G + +K++I D + F EV+++ L+H N++ G
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY 77
Query: 380 VDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKR---PLTWPQRKNIILDVAKG 436
D + +Y+ G + G+ K W QR + D+A G
Sbjct: 78 KD------KRLNFITEYIKGGTL-----------RGIIKSMDSQYPWSQRVSFAKDIASG 120
Query: 437 LAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLA------KQSREGQSHLTT---- 486
+AYLH I HRD+ + N L+ + VADFGLA K EG L
Sbjct: 121 MAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRK 177
Query: 487 ---RVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALD 529
V G ++APE EK DV+SFG+V+ EI+ GR D
Sbjct: 178 KRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII-GRVNAD 222
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 102/215 (47%), Gaps = 28/215 (13%)
Query: 318 KNFIGRGGFGLVYKGILQ----DGTTVAVKKVIESDFQGDA-EFCNEVEIISNLKHRNLV 372
+ IG G FG V +G L+ + VA+K + + EF +E I+ +H N++
Sbjct: 21 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 80
Query: 373 PLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILD 432
L G ++ ++M NG +D L NDG T Q ++
Sbjct: 81 RLEGVVT------NSMPVMILTEFMENGALDSFL--RLNDGQ------FTVIQLVGMLRG 126
Query: 433 VAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTH 492
+A G+ YL + + HRD+ A NIL+++++ +V+DFGL++ E S T +
Sbjct: 127 IASGMRYL---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSD-PTETSSLG 182
Query: 493 G-----YLAPEYALYGQLTEKSDVYSFGVVILEIM 522
G + APE + + T SD +S+G+V+ E+M
Sbjct: 183 GKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVM 217
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 108/220 (49%), Gaps = 38/220 (17%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISN--LKHRNLVPLRGCC 378
IG+G FG V++G + G VAVK I S + + F E EI L+H N++ G
Sbjct: 12 IGKGRFGEVWRGKWR-GEEVAVK--IFSSREERSWF-REAEIYQTVMLRHENIL---GFI 64
Query: 379 VVDG-DNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGL 437
D DN ++ +LV DY +G++ D+L G+ K + L A GL
Sbjct: 65 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIK----------LALSTASGL 114
Query: 438 AYLHYGV-----KPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVA--- 489
A+LH + KPAI HRD+K+ NIL+ + +AD GLA R + T +A
Sbjct: 115 AHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNH 172
Query: 490 --GTHGYLAPEY------ALYGQLTEKSDVYSFGVVILEI 521
GT Y+APE + + +++D+Y+ G+V EI
Sbjct: 173 RVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 108/220 (49%), Gaps = 38/220 (17%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISN--LKHRNLVPLRGCC 378
IG+G FG V++G + G VAVK I S + + F E EI L+H N++ G
Sbjct: 11 IGKGRFGEVWRGKWR-GEEVAVK--IFSSREERSWF-REAEIYQTVMLRHENIL---GFI 63
Query: 379 VVDG-DNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGL 437
D DN ++ +LV DY +G++ D+L G+ K + L A GL
Sbjct: 64 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIK----------LALSTASGL 113
Query: 438 AYLHYGV-----KPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVA--- 489
A+LH + KPAI HRD+K+ NIL+ + +AD GLA R + T +A
Sbjct: 114 AHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNH 171
Query: 490 --GTHGYLAPEY------ALYGQLTEKSDVYSFGVVILEI 521
GT Y+APE + + +++D+Y+ G+V EI
Sbjct: 172 RVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 108/220 (49%), Gaps = 38/220 (17%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISN--LKHRNLVPLRGCC 378
IG+G FG V++G + G VAVK I S + + F E EI L+H N++ G
Sbjct: 37 IGKGRFGEVWRGKWR-GEEVAVK--IFSSREERSWF-REAEIYQTVMLRHENIL---GFI 89
Query: 379 VVDG-DNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGL 437
D DN ++ +LV DY +G++ D+L G+ K + L A GL
Sbjct: 90 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIK----------LALSTASGL 139
Query: 438 AYLHYGV-----KPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVA--- 489
A+LH + KPAI HRD+K+ NIL+ + +AD GLA R + T +A
Sbjct: 140 AHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNH 197
Query: 490 --GTHGYLAPEY------ALYGQLTEKSDVYSFGVVILEI 521
GT Y+APE + + +++D+Y+ G+V EI
Sbjct: 198 RVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 104/228 (45%), Gaps = 29/228 (12%)
Query: 311 ATDKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQG---DAEFCNEVEIISNL 366
A + F +G+G FG VY Q +A+K + ++ + + + EVEI S+L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHL--FPSFNDGSGVAKRPLTWP 424
+H N++ L G + YL+ +Y P G V L F++ +R T+
Sbjct: 66 RHPNILRLYGYF------HDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATY- 113
Query: 425 QRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHL 484
I ++A L+Y H + HRDIK N+LL + ++ADFG S S
Sbjct: 114 -----ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSR 162
Query: 485 TTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLST 532
T + GT YL PE EK D++S GV+ E + G+ + +T
Sbjct: 163 RTELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 210
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 108/220 (49%), Gaps = 38/220 (17%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISN--LKHRNLVPLRGCC 378
IG+G FG V++G + G VAVK I S + + F E EI L+H N++ G
Sbjct: 17 IGKGRFGEVWRGKWR-GEEVAVK--IFSSREERSWF-REAEIYQTVMLRHENIL---GFI 69
Query: 379 VVDG-DNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGL 437
D DN ++ +LV DY +G++ D+L G+ K + L A GL
Sbjct: 70 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIK----------LALSTASGL 119
Query: 438 AYLHYGV-----KPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVA--- 489
A+LH + KPAI HRD+K+ NIL+ + +AD GLA R + T +A
Sbjct: 120 AHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNH 177
Query: 490 --GTHGYLAPEY------ALYGQLTEKSDVYSFGVVILEI 521
GT Y+APE + + +++D+Y+ G+V EI
Sbjct: 178 RVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 108/220 (49%), Gaps = 38/220 (17%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISN--LKHRNLVPLRGCC 378
IG+G FG V++G + G VAVK I S + + F E EI L+H N++ G
Sbjct: 50 IGKGRFGEVWRGKWR-GEEVAVK--IFSSREERSWF-REAEIYQTVMLRHENIL---GFI 102
Query: 379 VVDG-DNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGL 437
D DN ++ +LV DY +G++ D+L G+ K + L A GL
Sbjct: 103 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIK----------LALSTASGL 152
Query: 438 AYLHYGV-----KPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVA--- 489
A+LH + KPAI HRD+K+ NIL+ + +AD GLA R + T +A
Sbjct: 153 AHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNH 210
Query: 490 --GTHGYLAPEY------ALYGQLTEKSDVYSFGVVILEI 521
GT Y+APE + + +++D+Y+ G+V EI
Sbjct: 211 RVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 109/235 (46%), Gaps = 31/235 (13%)
Query: 314 KFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLV 372
K+++ IG+G G VY + + G VA++++ NE+ ++ K+ N+V
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIV 80
Query: 373 PLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILD 432
+V G E ++V +Y+ G++ D + + D +A + +
Sbjct: 81 NYLDSYLV------GDELWVVMEYLAGGSLTDVVTETCMDEGQIAA----------VCRE 124
Query: 433 VAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTH 492
+ L +LH + HRDIK+ NILL D ++ DFG Q QS +T V GT
Sbjct: 125 CLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTP 180
Query: 493 GYLAPEYALYGQLTEKSDVYSFGVVILEIMCGR---------KALDL-STSGSPR 537
++APE K D++S G++ +E++ G +AL L +T+G+P
Sbjct: 181 YWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPE 235
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 107/221 (48%), Gaps = 25/221 (11%)
Query: 309 ERATDKFSQKNFIGRGGFGLV----YKGILQD-GTTVAVKKVIESDFQGDAEFCNEVEII 363
ER SQ +G+G FG V Y + + G VAVK++ S +F E++I+
Sbjct: 22 ERHLKYISQ---LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQIL 78
Query: 364 SNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTW 423
L +V RG G R S R LV +Y+P+G + D F + A R L +
Sbjct: 79 KALHSDFIVKYRGVSYGPG---RQSLR-LVMEYLPSGCLRD--FLQRHRARLDASRLLLY 132
Query: 424 PQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSH 483
+ + KG+ YL G + + HRD+ A NIL++++ ++ADFGLAK + +
Sbjct: 133 SSQ------ICKGMEYL--GSRRCV-HRDLAARNILVESEAHVKIADFGLAKLLPLDKDY 183
Query: 484 LTTRVAGTHG--YLAPEYALYGQLTEKSDVYSFGVVILEIM 522
R G + APE + +SDV+SFGVV+ E+
Sbjct: 184 YVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELF 224
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 104/233 (44%), Gaps = 41/233 (17%)
Query: 313 DKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEI--ISNLKHRN 370
D IGRG +G VYKG L D VAVK F F NE I + ++H N
Sbjct: 13 DNLKLLELIGRGRYGAVYKGSL-DERPVAVKVF---SFANRQNFINEKNIYRVPLMEHDN 68
Query: 371 LVP-LRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNI 429
+ + G V D E LV +Y PNG++ +L +D W +
Sbjct: 69 IARFIVGDERVTADGR--MEYLLVMEYYPNGSLXKYLSLHTSD----------WVSSCRL 116
Query: 430 ILDVAKGLAYLHYGV------KPAIYHRDIKATNILLDADMRARVADFGLA------KQS 477
V +GLAYLH + KPAI HRD+ + N+L+ D ++DFGL+ +
Sbjct: 117 AHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLV 176
Query: 478 REGQS-HLTTRVAGTHGYLAPEYALYGQLT--------EKSDVYSFGVVILEI 521
R G+ + GT Y+APE L G + ++ D+Y+ G++ EI
Sbjct: 177 RPGEEDNAAISEVGTIRYMAPE-VLEGAVNLRDXESALKQVDMYALGLIYWEI 228
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 102/229 (44%), Gaps = 32/229 (13%)
Query: 310 RATDKFSQKNFIGRGGFGLVYKGIL----QDGTTVAVKKVIESDFQGDA--EFCNEVEII 363
++ +K+ + IG G FG K IL +DG +K++ S E EV ++
Sbjct: 21 QSMEKYVRLQKIGEGSFG---KAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVL 77
Query: 364 SNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGV---AKRP 420
+N+KH N+V R + E GS Y+V DY G+ LF N GV +
Sbjct: 78 ANMKHPNIVQYR-----ESFEENGS-LYIVMDYCEGGD----LFKRINAQKGVLFQEDQI 127
Query: 421 LTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREG 480
L W + + L ++H I HRDIK+ NI L D ++ DFG+A+
Sbjct: 128 LDW------FVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIAR-VLNS 177
Query: 481 QSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALD 529
L GT YL+PE KSD+++ G V+ E+ + A +
Sbjct: 178 TVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFE 226
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 107/221 (48%), Gaps = 25/221 (11%)
Query: 309 ERATDKFSQKNFIGRGGFGLV----YKGILQD-GTTVAVKKVIESDFQGDAEFCNEVEII 363
ER SQ +G+G FG V Y + + G VAVK++ S +F E++I+
Sbjct: 10 ERHLKYISQ---LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQIL 66
Query: 364 SNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTW 423
L +V RG G R S R LV +Y+P+G + D F + A R L +
Sbjct: 67 KALHSDFIVKYRGVSYGPG---RQSLR-LVMEYLPSGCLRD--FLQRHRARLDASRLLLY 120
Query: 424 PQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSH 483
+ + KG+ YL G + + HRD+ A NIL++++ ++ADFGLAK + +
Sbjct: 121 SSQ------ICKGMEYL--GSRRCV-HRDLAARNILVESEAHVKIADFGLAKLLPLDKDY 171
Query: 484 LTTRVAGTHG--YLAPEYALYGQLTEKSDVYSFGVVILEIM 522
R G + APE + +SDV+SFGVV+ E+
Sbjct: 172 YVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELF 212
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 108/220 (49%), Gaps = 38/220 (17%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISN--LKHRNLVPLRGCC 378
IG+G FG V++G + G VAVK I S + + F E EI L+H N++ G
Sbjct: 14 IGKGRFGEVWRGKWR-GEEVAVK--IFSSREERSWF-REAEIYQTVMLRHENIL---GFI 66
Query: 379 VVDG-DNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGL 437
D DN ++ +LV DY +G++ D+L G+ K + L A GL
Sbjct: 67 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIK----------LALSTASGL 116
Query: 438 AYLHYGV-----KPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVA--- 489
A+LH + KPAI HRD+K+ NIL+ + +AD GLA R + T +A
Sbjct: 117 AHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNH 174
Query: 490 --GTHGYLAPEY------ALYGQLTEKSDVYSFGVVILEI 521
GT Y+APE + + +++D+Y+ G+V EI
Sbjct: 175 RVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 104/228 (45%), Gaps = 29/228 (12%)
Query: 311 ATDKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQG---DAEFCNEVEIISNL 366
A + F +G+G FG VY Q +A+K + ++ + + + EVEI S+L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHL--FPSFNDGSGVAKRPLTWP 424
+H N++ L G + YL+ +Y P G V L F++ +R T+
Sbjct: 69 RHPNILRLYGYF------HDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATY- 116
Query: 425 QRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHL 484
I ++A L+Y H + HRDIK N+LL + ++ADFG S S
Sbjct: 117 -----ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSR 165
Query: 485 TTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLST 532
T + GT YL PE EK D++S GV+ E + G+ + +T
Sbjct: 166 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 213
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 108/238 (45%), Gaps = 35/238 (14%)
Query: 303 FKIQDLERATDKFSQK---------NFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGD 353
F +D A +F+++ IG G FG V G L+ + I++ G
Sbjct: 14 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 73
Query: 354 AE-----FCNEVEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFP 408
E F +E I+ H N++ L G + + ++ ++M NG++D L
Sbjct: 74 TEKQRRDFLSEASIMGQFDHPNVIHLEGVVT------KSTPVMIITEFMENGSLDSFL-- 125
Query: 409 SFNDGSGVAKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARV 468
NDG T Q ++ +A G+ YL HRD+ A NIL+++++ +V
Sbjct: 126 RQNDGQ------FTVIQLVGMLRGIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCKV 176
Query: 469 ADFGLAKQSREGQSHLT-TRVAGTH---GYLAPEYALYGQLTEKSDVYSFGVVILEIM 522
+DFGL++ + S T T G + APE Y + T SDV+S+G+V+ E+M
Sbjct: 177 SDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVM 234
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 107/223 (47%), Gaps = 25/223 (11%)
Query: 309 ERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCN-EVEIISNLK 367
E+ ++ IG G FG+V++ L + VA+KKV++ D F N E++I+ +K
Sbjct: 36 EQREIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQ-----DKRFKNRELQIMRIVK 90
Query: 368 HRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQR- 426
H N+V L+ +GD + LV +Y+P + AK T P
Sbjct: 91 HPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPET--------VYRASRHYAKLKQTMPMLL 142
Query: 427 -KNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRA-RVADFGLAKQSREGQSHL 484
K + + + LAY+H I HRDIK N+LLD ++ DFG AK G+ ++
Sbjct: 143 IKLYMYQLLRSLAYIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNV 199
Query: 485 TTRVAGTHGYLAPEYALYG--QLTEKSDVYSFGVVILEIMCGR 525
+ + Y APE ++G T D++S G V+ E+M G+
Sbjct: 200 SX--ICSRYYRAPEL-IFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 104/228 (45%), Gaps = 29/228 (12%)
Query: 311 ATDKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQG---DAEFCNEVEIISNL 366
A + F +G+G FG VY Q +A+K + ++ + + + EVEI S+L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHL--FPSFNDGSGVAKRPLTWP 424
+H N++ L G + YL+ +Y P G V L F++ +R T+
Sbjct: 66 RHPNILRLYGYF------HDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATY- 113
Query: 425 QRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHL 484
I ++A L+Y H + HRDIK N+LL + ++ADFG S S
Sbjct: 114 -----ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSR 162
Query: 485 TTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLST 532
T + GT YL PE EK D++S GV+ E + G+ + +T
Sbjct: 163 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 210
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 104/228 (45%), Gaps = 29/228 (12%)
Query: 311 ATDKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQG---DAEFCNEVEIISNL 366
A + F +G+G FG VY Q +A+K + ++ + + + EVEI S+L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHL--FPSFNDGSGVAKRPLTWP 424
+H N++ L G + YL+ +Y P G V L F++ +R T+
Sbjct: 71 RHPNILRLYGYF------HDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATY- 118
Query: 425 QRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHL 484
I ++A L+Y H + HRDIK N+LL + ++ADFG S S
Sbjct: 119 -----ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSR 167
Query: 485 TTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLST 532
T + GT YL PE EK D++S GV+ E + G+ + +T
Sbjct: 168 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 215
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 105/228 (46%), Gaps = 29/228 (12%)
Query: 311 ATDKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQG---DAEFCNEVEIISNL 366
A + F +G+G FG VY Q +A+K + ++ + + + EVEI S+L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHL--FPSFNDGSGVAKRPLTWP 424
+H N++ L G + YL+ +Y P G V L F++ +R T+
Sbjct: 67 RHPNILRLYGYF------HDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATY- 114
Query: 425 QRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHL 484
I ++A L+Y H + HRDIK N+LL + ++ADFG S S
Sbjct: 115 -----ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW---SCHAPSSR 163
Query: 485 TTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLST 532
T ++GT YL PE EK D++S GV+ E + G+ + +T
Sbjct: 164 RTTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 211
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 104/228 (45%), Gaps = 29/228 (12%)
Query: 311 ATDKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQG---DAEFCNEVEIISNL 366
A + F +G+G FG VY Q +A+K + ++ + + + EVEI S+L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHL--FPSFNDGSGVAKRPLTWP 424
+H N++ L G + YL+ +Y P G V L F++ +R T+
Sbjct: 92 RHPNILRLYGYF------HDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATY- 139
Query: 425 QRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHL 484
I ++A L+Y H + HRDIK N+LL + ++ADFG S S
Sbjct: 140 -----ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSR 188
Query: 485 TTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLST 532
T + GT YL PE EK D++S GV+ E + G+ + +T
Sbjct: 189 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 236
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 104/228 (45%), Gaps = 29/228 (12%)
Query: 311 ATDKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQG---DAEFCNEVEIISNL 366
A + F +G+G FG VY Q +A+K + ++ + + + EVEI S+L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHL--FPSFNDGSGVAKRPLTWP 424
+H N++ L G + YL+ +Y P G V L F++ +R T+
Sbjct: 69 RHPNILRLYGYF------HDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATY- 116
Query: 425 QRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHL 484
I ++A L+Y H + HRDIK N+LL + ++ADFG S S
Sbjct: 117 -----ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSR 165
Query: 485 TTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLST 532
T + GT YL PE EK D++S GV+ E + G+ + +T
Sbjct: 166 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 213
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 103/228 (45%), Gaps = 29/228 (12%)
Query: 311 ATDKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQG---DAEFCNEVEIISNL 366
A + F +G+G FG VY Q +A+K + ++ + + + EVEI S+L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHL--FPSFNDGSGVAKRPLTWP 424
+H N++ L G + YL+ +Y P G V L F++ +R T+
Sbjct: 71 RHPNILRLYGYF------HDATRVYLILEYAPRGEVYKELQKLSKFDE-----QRTATY- 118
Query: 425 QRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHL 484
I ++A L+Y H + HRDIK N+LL + ++ADFG S S
Sbjct: 119 -----ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSR 167
Query: 485 TTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLST 532
+ GT YL PE EK D++S GV+ E + G+ + +T
Sbjct: 168 RXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 215
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 104/228 (45%), Gaps = 29/228 (12%)
Query: 311 ATDKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQG---DAEFCNEVEIISNL 366
A + F +G+G FG VY Q +A+K + ++ + + + EVEI S+L
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHL--FPSFNDGSGVAKRPLTWP 424
+H N++ L G + YL+ +Y P G V L F++ +R T+
Sbjct: 70 RHPNILRLYGYF------HDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATY- 117
Query: 425 QRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHL 484
I ++A L+Y H + HRDIK N+LL + ++ADFG S S
Sbjct: 118 -----ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSR 166
Query: 485 TTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLST 532
T + GT YL PE EK D++S GV+ E + G+ + +T
Sbjct: 167 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 214
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 108/220 (49%), Gaps = 38/220 (17%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISN--LKHRNLVPLRGCC 378
+G+G +G V++G Q G VAVK D + + E E+ + L+H N++ G
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFSSRD---EKSWFRETELYNTVMLRHENIL---GFI 68
Query: 379 VVDGDNERGSER-YLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGL 437
D + S + +L+ Y G++ D+L + D + I+L +A GL
Sbjct: 69 ASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLR----------IVLSIASGL 118
Query: 438 AYLHYGV-----KPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTT----RV 488
A+LH + KPAI HRD+K+ NIL+ + + +AD GLA + + L RV
Sbjct: 119 AHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV 178
Query: 489 AGTHGYLAPEYALYGQLT-------EKSDVYSFGVVILEI 521
GT Y+APE L + ++ D+++FG+V+ E+
Sbjct: 179 -GTKRYMAPE-VLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 104/228 (45%), Gaps = 29/228 (12%)
Query: 311 ATDKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQG---DAEFCNEVEIISNL 366
A + F +G+G FG VY Q +A+K + ++ + + + EVEI S+L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHL--FPSFNDGSGVAKRPLTWP 424
+H N++ L G + YL+ +Y P G V L F++ +R T+
Sbjct: 66 RHPNILRLYGYF------HDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATY- 113
Query: 425 QRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHL 484
I ++A L+Y H + HRDIK N+LL + ++ADFG S S
Sbjct: 114 -----ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSR 162
Query: 485 TTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLST 532
T + GT YL PE EK D++S GV+ E + G+ + +T
Sbjct: 163 RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 210
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 104/228 (45%), Gaps = 29/228 (12%)
Query: 311 ATDKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQG---DAEFCNEVEIISNL 366
A + F +G+G FG VY Q +A+K + ++ + + + EVEI S+L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHL--FPSFNDGSGVAKRPLTWP 424
+H N++ L G + YL+ +Y P G V L F++ +R T+
Sbjct: 66 RHPNILRLYGYF------HDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATY- 113
Query: 425 QRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHL 484
I ++A L+Y H + HRDIK N+LL + ++ADFG S S
Sbjct: 114 -----ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSR 162
Query: 485 TTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLST 532
T + GT YL PE EK D++S GV+ E + G+ + +T
Sbjct: 163 RTXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 210
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 108/220 (49%), Gaps = 38/220 (17%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISN--LKHRNLVPLRGCC 378
+G+G +G V++G Q G VAVK D + + E E+ + L+H N++ G
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFSSRD---EKSWFRETELYNTVMLRHENIL---GFI 68
Query: 379 VVDGDNERGSER-YLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGL 437
D + S + +L+ Y G++ D+L + D + I+L +A GL
Sbjct: 69 ASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLR----------IVLSIASGL 118
Query: 438 AYLHYGV-----KPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTT----RV 488
A+LH + KPAI HRD+K+ NIL+ + + +AD GLA + + L RV
Sbjct: 119 AHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV 178
Query: 489 AGTHGYLAPEYALYGQLT-------EKSDVYSFGVVILEI 521
GT Y+APE L + ++ D+++FG+V+ E+
Sbjct: 179 -GTKRYMAPE-VLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 104/228 (45%), Gaps = 29/228 (12%)
Query: 311 ATDKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQG---DAEFCNEVEIISNL 366
A + F +G+G FG VY Q +A+K + ++ + + + EVEI S+L
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHL--FPSFNDGSGVAKRPLTWP 424
+H N++ L G + YL+ +Y P G V L F++ +R T+
Sbjct: 65 RHPNILRLYGYF------HDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATY- 112
Query: 425 QRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHL 484
I ++A L+Y H + HRDIK N+LL + ++ADFG S S
Sbjct: 113 -----ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSR 161
Query: 485 TTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLST 532
T + GT YL PE EK D++S GV+ E + G+ + +T
Sbjct: 162 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 209
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 104/228 (45%), Gaps = 29/228 (12%)
Query: 311 ATDKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQG---DAEFCNEVEIISNL 366
A + F +G+G FG VY Q +A+K + ++ + + + EVEI S+L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHL--FPSFNDGSGVAKRPLTWP 424
+H N++ L G + YL+ +Y P G V L F++ +R T+
Sbjct: 66 RHPNILRLYGYF------HDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATY- 113
Query: 425 QRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHL 484
I ++A L+Y H + HRDIK N+LL + ++ADFG S S
Sbjct: 114 -----ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSR 162
Query: 485 TTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLST 532
T + GT YL PE EK D++S GV+ E + G+ + +T
Sbjct: 163 RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 210
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 104/228 (45%), Gaps = 29/228 (12%)
Query: 311 ATDKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQG---DAEFCNEVEIISNL 366
A + F +G+G FG VY Q +A+K + ++ + + + EVEI S+L
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHL--FPSFNDGSGVAKRPLTWP 424
+H N++ L G + YL+ +Y P G V L F++ +R T+
Sbjct: 83 RHPNILRLYGYF------HDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATY- 130
Query: 425 QRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHL 484
I ++A L+Y H + HRDIK N+LL + ++ADFG S S
Sbjct: 131 -----ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSR 179
Query: 485 TTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLST 532
T + GT YL PE EK D++S GV+ E + G+ + +T
Sbjct: 180 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 227
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 104/228 (45%), Gaps = 29/228 (12%)
Query: 311 ATDKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQG---DAEFCNEVEIISNL 366
A + F +G+G FG VY Q +A+K + ++ + + + EVEI S+L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHL--FPSFNDGSGVAKRPLTWP 424
+H N++ L G + YL+ +Y P G V L F++ +R T+
Sbjct: 67 RHPNILRLYGYF------HDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATY- 114
Query: 425 QRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHL 484
I ++A L+Y H + HRDIK N+LL + ++ADFG S S
Sbjct: 115 -----ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSR 163
Query: 485 TTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLST 532
T + GT YL PE EK D++S GV+ E + G+ + +T
Sbjct: 164 RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 211
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 104/228 (45%), Gaps = 29/228 (12%)
Query: 311 ATDKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQG---DAEFCNEVEIISNL 366
A + F +G+G FG VY Q +A+K + ++ + + + EVEI S+L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHL--FPSFNDGSGVAKRPLTWP 424
+H N++ L G + YL+ +Y P G V L F++ +R T+
Sbjct: 71 RHPNILRLYGYF------HDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATY- 118
Query: 425 QRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHL 484
I ++A L+Y H + HRDIK N+LL + ++ADFG S S
Sbjct: 119 -----ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSR 167
Query: 485 TTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLST 532
T + GT YL PE EK D++S GV+ E + G+ + +T
Sbjct: 168 RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 215
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 112/237 (47%), Gaps = 35/237 (14%)
Query: 303 FKIQDLERATDKFSQK---------NFIGRGGFGLVYKGILQ----DGTTVAVK--KVIE 347
F +D +A +F+++ IG G FG V G L+ VA+K K
Sbjct: 10 FTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGY 69
Query: 348 SDFQGDAEFCNEVEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLF 407
+D Q +F +E I+ H N++ L G + ++ +YM NG++D F
Sbjct: 70 TDKQ-RRDFLSEASIMGQFDHPNIIHLEGVVT------KCKPVMIITEYMENGSLD--AF 120
Query: 408 PSFNDGSGVAKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRAR 467
NDG T Q ++ + G+ YL + HRD+ A NIL+++++ +
Sbjct: 121 LRKNDGR------FTVIQLVGMLRGIGSGMKYLS---DMSAVHRDLAARNILVNSNLVCK 171
Query: 468 VADFGLAKQ-SREGQSHLTTRVAGTH-GYLAPEYALYGQLTEKSDVYSFGVVILEIM 522
V+DFG+++ + ++ TTR + APE Y + T SDV+S+G+V+ E+M
Sbjct: 172 VSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVM 228
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 103/224 (45%), Gaps = 31/224 (13%)
Query: 310 RATDKFSQKNFIGRGGFGLVYKGILQD-GTTVAVKKVIESDFQGDAE--FCNEVEIISNL 366
++ +K+ +G G +G+V K +D G VA+KK +ESD + E++++ L
Sbjct: 22 QSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQL 81
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDD-HLFPSFNDGSGVAKRPLTWPQ 425
+H NLV L C ++ YLV++++ + +DD LFP+ D V K
Sbjct: 82 RHENLVNLLEVC------KKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQK------- 128
Query: 426 RKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLT 485
+ + G+ + H I HRDIK NIL+ ++ DFG A+
Sbjct: 129 ---YLFQIINGIGFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYD 182
Query: 486 TRVAGTHGYLAPEYAL----YGQLTEKSDVYSFGVVILEIMCGR 525
VA T Y APE + YG+ DV++ G ++ E+ G
Sbjct: 183 DEVA-TRWYRAPELLVGDVKYGKAV---DVWAIGCLVTEMFMGE 222
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 104/228 (45%), Gaps = 29/228 (12%)
Query: 311 ATDKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQG---DAEFCNEVEIISNL 366
A + F +G+G FG VY Q +A+K + ++ + + + EVEI S+L
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHL--FPSFNDGSGVAKRPLTWP 424
+H N++ L G + YL+ +Y P G V L F++ +R T+
Sbjct: 63 RHPNILRLYGYF------HDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATY- 110
Query: 425 QRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHL 484
I ++A L+Y H + HRDIK N+LL + ++ADFG S S
Sbjct: 111 -----ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSR 159
Query: 485 TTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLST 532
T + GT YL PE EK D++S GV+ E + G+ + +T
Sbjct: 160 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 207
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 104/228 (45%), Gaps = 29/228 (12%)
Query: 311 ATDKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQG---DAEFCNEVEIISNL 366
A + F +G+G FG VY Q +A+K + ++ + + + EVEI S+L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHL--FPSFNDGSGVAKRPLTWP 424
+H N++ L G + YL+ +Y P G V L F++ +R T+
Sbjct: 71 RHPNILRLYGYF------HDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATY- 118
Query: 425 QRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHL 484
I ++A L+Y H + HRDIK N+LL + ++ADFG S S
Sbjct: 119 -----ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSR 167
Query: 485 TTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLST 532
T + GT YL PE EK D++S GV+ E + G+ + +T
Sbjct: 168 RTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANT 215
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 104/220 (47%), Gaps = 25/220 (11%)
Query: 309 ERATDKFSQKNFIGRGGFGLV----YKGILQD-GTTVAVKKVIESDFQGDAEFCNEVEII 363
ER SQ +G+G FG V Y + + G VAVK++ S +F E++I+
Sbjct: 6 ERHLKYISQ---LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQIL 62
Query: 364 SNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTW 423
L +V RG G E LV +Y+P+G + D L + A R L +
Sbjct: 63 KALHSDFIVKYRGVSYGPGR----PELRLVMEYLPSGCLRDFL--QRHRARLDASRLLLY 116
Query: 424 PQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSH 483
+ + KG+ YL G + + HRD+ A NIL++++ ++ADFGLAK +
Sbjct: 117 SSQ------ICKGMEYL--GSRRCV-HRDLAARNILVESEAHVKIADFGLAKLLPLDKDX 167
Query: 484 LTTRVAGTHG--YLAPEYALYGQLTEKSDVYSFGVVILEI 521
R G + APE + +SDV+SFGVV+ E+
Sbjct: 168 XVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL 207
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 109/221 (49%), Gaps = 40/221 (18%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISN--LKHRNLVPLRGCC 378
+G+G +G V++G L G +VAVK D Q + E EI + L+H N++ G
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFSSRDEQS---WFRETEIYNTVLLRHDNIL---GFI 68
Query: 379 VVDGDNERGSER-YLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRK-NIILDVAKG 436
D + S + +L+ Y +G++ D L +R P + + A G
Sbjct: 69 ASDMTSRNSSTQLWLITHYHEHGSLYDFL-----------QRQTLEPHLALRLAVSAACG 117
Query: 437 LAYLHYGV-----KPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHL----TTR 487
LA+LH + KPAI HRD K+ N+L+ ++++ +AD GLA +G +L R
Sbjct: 118 LAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPR 177
Query: 488 VAGTHGYLAPEYALYGQLTEK-------SDVYSFGVVILEI 521
V GT Y+APE L Q+ +D+++FG+V+ EI
Sbjct: 178 V-GTKRYMAPE-VLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 108/220 (49%), Gaps = 38/220 (17%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISN--LKHRNLVPLRGCC 378
+G+G +G V++G Q G VAVK D + + E E+ + L+H N++ G
Sbjct: 45 VGKGRYGEVWRGSWQ-GENVAVKIFSSRD---EKSWFRETELYNTVMLRHENIL---GFI 97
Query: 379 VVDGDNERGSER-YLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGL 437
D + S + +L+ Y G++ D+L + D + I+L +A GL
Sbjct: 98 ASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLR----------IVLSIASGL 147
Query: 438 AYLHYGV-----KPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTT----RV 488
A+LH + KPAI HRD+K+ NIL+ + + +AD GLA + + L RV
Sbjct: 148 AHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV 207
Query: 489 AGTHGYLAPEYALYGQLT-------EKSDVYSFGVVILEI 521
GT Y+APE L + ++ D+++FG+V+ E+
Sbjct: 208 -GTKRYMAPE-VLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 103/216 (47%), Gaps = 26/216 (12%)
Query: 315 FSQKNFIGRGGFGLVYKGILQ----DGTTVAVK--KVIESDFQGDAEFCNEVEIISNLKH 368
S +G G FG V G L+ +VA+K KV ++ Q +F E I+ H
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQFDH 105
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKN 428
N++ L G + +V +YM NG++D F +D T Q
Sbjct: 106 PNIIRLEGVVT------KSKPVMIVTEYMENGSLDS--FLRKHDAQ------FTVIQLVG 151
Query: 429 IILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQ-SREGQSHLTTR 487
++ +A G+ YL HRD+ A NIL+++++ +V+DFGLA+ + ++ TTR
Sbjct: 152 MLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTR 208
Query: 488 VAGTH-GYLAPEYALYGQLTEKSDVYSFGVVILEIM 522
+ +PE Y + T SDV+S+G+V+ E+M
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 104/223 (46%), Gaps = 23/223 (10%)
Query: 306 QDLERATDKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQGD-AEFCNEVEII 363
+D + + IG GGF V + G VA+K + ++ D E+E +
Sbjct: 3 KDYDELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEAL 62
Query: 364 SNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTW 423
NL+H+++ L E ++ ++V +Y P G + D++ +++ L+
Sbjct: 63 KNLRHQHICQLYHVL------ETANKIFMVLEYCPGGELFDYI---------ISQDRLSE 107
Query: 424 PQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSH 483
+ + + + +AY+H HRD+K N+L D + ++ DFGL + + + +
Sbjct: 108 EETRVVFRQIVSAVAYVH---SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDY 164
Query: 484 LTTRVAGTHGYLAPEYALYGQ--LTEKSDVYSFGVVILEIMCG 524
G+ Y APE + G+ L ++DV+S G+++ +MCG
Sbjct: 165 HLQTCCGSLAYAAPE-LIQGKSYLGSEADVWSMGILLYVLMCG 206
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 105/223 (47%), Gaps = 27/223 (12%)
Query: 309 ERATDKFSQKNF---IGR-GGFGLVYKGILQDGTTVAVKKVIESDFQGDAE-FCNEVEII 363
E T + ++F IG G FG VYK ++ + +A KVI++ + + E + E++I+
Sbjct: 2 EHVTRDLNPEDFWEIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDIL 61
Query: 364 SNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTW 423
++ H N+V L + + +++ ++ G VD + +RPLT
Sbjct: 62 ASCDHPNIVKLLDAFYYENN------LWILIEFCAGGAVDAVMLE--------LERPLTE 107
Query: 424 PQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSH 483
Q + + L YLH I HRD+KA NIL D ++ADFG++ ++
Sbjct: 108 SQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQ 164
Query: 484 LTTRVAGTHGYLAPEYALYGQLTE-----KSDVYSFGVVILEI 521
GT ++APE + + K+DV+S G+ ++E+
Sbjct: 165 RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 104/225 (46%), Gaps = 28/225 (12%)
Query: 314 KFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIE-----SDFQGDAEFCNEVEIISNLK 367
+ + +G G FG VYKGI + DG V + I+ + + + E +E +++ +
Sbjct: 18 ELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVG 77
Query: 368 HRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRK 427
+ L G C+ S LV MP G + DH+ N G ++ L W
Sbjct: 78 SPYVSRLLGICLT-------STVQLVTQLMPYGCLLDHV--RENRGRLGSQDLLNW---- 124
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAK--QSREGQSHLT 485
+ +AKG++YL + HRD+ A N+L+ + ++ DFGLA+ E + H
Sbjct: 125 --CMQIAKGMSYLE---DVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHAD 179
Query: 486 TRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMC-GRKALD 529
++A E L + T +SDV+S+GV + E+M G K D
Sbjct: 180 GGKVPIK-WMALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYD 223
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 109/220 (49%), Gaps = 23/220 (10%)
Query: 313 DKFSQKNFIGRGGFGLVYKGILQ-DGTTVAVKKV-IESDFQG-DAEFCNEVEIISNLKHR 369
+ F + IG G +G+VYK + G VA+KK+ ++++ +G + E+ ++ L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 370 NLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNI 429
N+V L V+ +N+ YLV++++ F D S + PL P K+
Sbjct: 63 NIVKL--LDVIHTENKL----YLVFEFLHQD------LKKFMDASALTGIPL--PLIKSY 108
Query: 430 ILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVA 489
+ + +GLA+ H + HRD+K N+L++ + ++ADFGLA+ T V
Sbjct: 109 LFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 165
Query: 490 GTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMCGRKAL 528
T Y APE L + + D++S G + E M R+AL
Sbjct: 166 -TLWYRAPEILLGXKYYSTAVDIWSLGCIFAE-MVTRRAL 203
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 96/215 (44%), Gaps = 25/215 (11%)
Query: 315 FSQKNFIGRGGFG-LVYKGILQDGTTVAVKKVIESDFQG-DAEFCNEVEIISNLKHRNLV 372
F K +G G F +V G AVK + + +G ++ NE+ ++ +KH N+V
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIV 83
Query: 373 PLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILD 432
L E + YLV + G + D + V K T +I
Sbjct: 84 ALEDIY------ESPNHLYLVMQLVSGGELFDRI---------VEKGFYTEKDASTLIRQ 128
Query: 433 VAKGLAYLHYGVKPAIYHRDIKATNILL---DADMRARVADFGLAKQSREGQSHLTTRVA 489
V + YLH + I HRD+K N+L D + + ++DFGL+K EG+ + +
Sbjct: 129 VLDAVYYLH---RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKM--EGKGDVMSTAC 183
Query: 490 GTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
GT GY+APE ++ D +S GV+ ++CG
Sbjct: 184 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 218
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 109/220 (49%), Gaps = 23/220 (10%)
Query: 313 DKFSQKNFIGRGGFGLVYKGILQ-DGTTVAVKKV-IESDFQG-DAEFCNEVEIISNLKHR 369
+ F + IG G +G+VYK + G VA+KK+ ++++ +G + E+ ++ L H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 370 NLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNI 429
N+V L V+ +N+ YLV++++ F D S + PL P K+
Sbjct: 70 NIVKL--LDVIHTENKL----YLVFEFLHQD------LKKFMDASALTGIPL--PLIKSY 115
Query: 430 ILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVA 489
+ + +GLA+ H + HRD+K N+L++ + ++ADFGLA+ T V
Sbjct: 116 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 172
Query: 490 GTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMCGRKAL 528
T Y APE L + + D++S G + E M R+AL
Sbjct: 173 -TLWYRAPEILLGXKYYSTAVDIWSLGCIFAE-MVTRRAL 210
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 109/235 (46%), Gaps = 31/235 (13%)
Query: 314 KFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLV 372
K+++ IG+G G VY + + G VA++++ NE+ ++ K+ N+V
Sbjct: 22 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIV 81
Query: 373 PLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILD 432
+V G E ++V +Y+ G++ D + + D +A + +
Sbjct: 82 NYLDSYLV------GDELWVVMEYLAGGSLTDVVTETCMDEGQIAA----------VCRE 125
Query: 433 VAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTH 492
+ L +LH + HR+IK+ NILL D ++ DFG Q QS +T V GT
Sbjct: 126 CLQALEFLHSN---QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTP 181
Query: 493 GYLAPEYALYGQLTEKSDVYSFGVVILEIMCGR---------KALDL-STSGSPR 537
++APE K D++S G++ +E++ G +AL L +T+G+P
Sbjct: 182 YWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPE 236
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 26/216 (12%)
Query: 315 FSQKNFIGRGGFGLVYKGILQ----DGTTVAVK--KVIESDFQGDAEFCNEVEIISNLKH 368
S +G G FG V G L+ +VA+K KV ++ Q +F E I+ H
Sbjct: 35 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQFDH 93
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKN 428
N++ L G + +V +YM NG++D F +D T Q
Sbjct: 94 PNIIRLEGVVT------KSKPVMIVTEYMENGSLDS--FLRKHDAQ------FTVIQLVG 139
Query: 429 IILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQ-SREGQSHLTTR 487
++ +A G+ YL HRD+ A NIL+++++ +V+DFGL++ + ++ TTR
Sbjct: 140 MLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 196
Query: 488 VAGTH-GYLAPEYALYGQLTEKSDVYSFGVVILEIM 522
+ +PE Y + T SDV+S+G+V+ E+M
Sbjct: 197 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 232
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 26/216 (12%)
Query: 315 FSQKNFIGRGGFGLVYKGILQ----DGTTVAVK--KVIESDFQGDAEFCNEVEIISNLKH 368
S +G G FG V G L+ +VA+K KV ++ Q +F E I+ H
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQFDH 105
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKN 428
N++ L G + +V +YM NG++D F +D T Q
Sbjct: 106 PNIIRLEGVVT------KSKPVMIVTEYMENGSLDS--FLRKHDAQ------FTVIQLVG 151
Query: 429 IILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQ-SREGQSHLTTR 487
++ +A G+ YL HRD+ A NIL+++++ +V+DFGL++ + ++ TTR
Sbjct: 152 MLRGIASGMKYLS---DMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
Query: 488 VAGTH-GYLAPEYALYGQLTEKSDVYSFGVVILEIM 522
+ +PE Y + T SDV+S+G+V+ E+M
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 110/222 (49%), Gaps = 23/222 (10%)
Query: 311 ATDKFSQKNFIGRGGFGLVYKGILQ-DGTTVAVKKV-IESDFQG-DAEFCNEVEIISNLK 367
+ + F + IG G +G+VYK + G VA+KK+ ++++ +G + E+ ++ L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 368 HRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRK 427
H N+V L V+ +N+ YLV++++ F D S + PL P K
Sbjct: 62 HPNIVKL--LDVIHTENKL----YLVFEFLHQD------LKKFMDASALTGIPL--PLIK 107
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+ + + +GLA+ H + HRD+K N+L++ + ++ADFGLA+ T
Sbjct: 108 SYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE 164
Query: 488 VAGTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMCGRKAL 528
V T Y APE L + + D++S G + E M R+AL
Sbjct: 165 VV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAE-MVTRRAL 204
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 108/235 (45%), Gaps = 31/235 (13%)
Query: 314 KFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLV 372
K+++ IG+G G VY + + G VA++++ NE+ ++ K+ N+V
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIV 80
Query: 373 PLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILD 432
+V G E ++V +Y+ G++ D + + D +A + +
Sbjct: 81 NYLDSYLV------GDELWVVMEYLAGGSLTDVVTETCMDEGQIAA----------VCRE 124
Query: 433 VAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTH 492
+ L +LH + HRDIK+ NILL D ++ DFG Q QS + V GT
Sbjct: 125 CLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV-GTP 180
Query: 493 GYLAPEYALYGQLTEKSDVYSFGVVILEIMCGR---------KALDL-STSGSPR 537
++APE K D++S G++ +E++ G +AL L +T+G+P
Sbjct: 181 YWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPE 235
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 110/225 (48%), Gaps = 28/225 (12%)
Query: 314 KFSQKNFIGRGGFGLVYKGI-LQDGTTV----AVKKVIESDF-QGDAEFCNEVEIISNLK 367
+F + +G G FG VYKG+ + +G V A+K++ E+ + + E +E +++++
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 368 HRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRK 427
+ ++ L G C+ S L+ MP G + D++ D G ++ L W
Sbjct: 77 NPHVCRLLGICLT-------STVQLIMQLMPFGXLLDYVR-EHKDNIG-SQYLLNW---- 123
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAK--QSREGQSHLT 485
+ +AKG+ YL + HRD+ A N+L+ ++ DFGLAK + E + H
Sbjct: 124 --CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 178
Query: 486 TRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMC-GRKALD 529
++A E L+ T +SDV+S+GV + E+M G K D
Sbjct: 179 GGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 104/228 (45%), Gaps = 29/228 (12%)
Query: 311 ATDKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQG---DAEFCNEVEIISNL 366
A + F +G+G FG VY Q +A+K + ++ + + + EVEI S+L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHL--FPSFNDGSGVAKRPLTWP 424
+H N++ L G + YL+ +Y P G V L F++ +R T+
Sbjct: 68 RHPNILRLYGYF------HDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATY- 115
Query: 425 QRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHL 484
I ++A L+Y H + HRDIK N+LL + ++A+FG S S
Sbjct: 116 -----ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGW---SVHAPSSR 164
Query: 485 TTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLST 532
T + GT YL PE EK D++S GV+ E + G+ + +T
Sbjct: 165 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 212
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 26/216 (12%)
Query: 315 FSQKNFIGRGGFGLVYKGILQ----DGTTVAVK--KVIESDFQGDAEFCNEVEIISNLKH 368
S +G G FG V G L+ +VA+K KV ++ Q +F E I+ H
Sbjct: 18 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQFDH 76
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKN 428
N++ L G + +V +YM NG++D F +D T Q
Sbjct: 77 PNIIRLEGVVT------KSKPVMIVTEYMENGSLDS--FLRKHDAQ------FTVIQLVG 122
Query: 429 IILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREG-QSHLTTR 487
++ +A G+ YL HRD+ A NIL+++++ +V+DFGL++ + ++ TTR
Sbjct: 123 MLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 179
Query: 488 VAGTH-GYLAPEYALYGQLTEKSDVYSFGVVILEIM 522
+ +PE Y + T SDV+S+G+V+ E+M
Sbjct: 180 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 215
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 108/235 (45%), Gaps = 31/235 (13%)
Query: 314 KFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLV 372
K+++ IG+G G VY + + G VA++++ NE+ ++ K+ N+V
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIV 80
Query: 373 PLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILD 432
+V G E ++V +Y+ G++ D + + D +A + +
Sbjct: 81 NYLDSYLV------GDELWVVMEYLAGGSLTDVVTETCMDEGQIAA----------VCRE 124
Query: 433 VAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTH 492
+ L +LH + HRDIK+ NILL D ++ DFG Q QS + V GT
Sbjct: 125 CLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMV-GTP 180
Query: 493 GYLAPEYALYGQLTEKSDVYSFGVVILEIMCGR---------KALDL-STSGSPR 537
++APE K D++S G++ +E++ G +AL L +T+G+P
Sbjct: 181 YWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPE 235
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 98/214 (45%), Gaps = 26/214 (12%)
Query: 318 KNFIGRGGFGLVYKGIL----QDGTTVAVK--KVIESDFQGDAEFCNEVEIISNLKHRNL 371
+ IG G G V G L Q VA+K K ++ Q +F +E I+ H N+
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQ-RRDFLSEASIMGQFDHPNI 112
Query: 372 VPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIIL 431
+ L G RG +V +YM NG++D F +DG T Q ++
Sbjct: 113 IRLEGVVT------RGRLAMIVTEYMENGSLD--TFLRTHDGQ------FTIMQLVGMLR 158
Query: 432 DVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGT 491
V G+ YL HRD+ A N+L+D+++ +V+DFGL++ + T G
Sbjct: 159 GVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGK 215
Query: 492 --HGYLAPEYALYGQLTEKSDVYSFGVVILEIMC 523
+ APE + + SDV+SFGVV+ E++
Sbjct: 216 IPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 106/228 (46%), Gaps = 29/228 (12%)
Query: 311 ATDKFSQKNFIGRGGFGLVYKGILQDGTTV-AVKKVIESDFQG---DAEFCNEVEIISNL 366
A + F +G+G FG VY ++ + A+K + ++ + + + EVEI S+L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHL--FPSFNDGSGVAKRPLTWP 424
+H N++ L G D+ R YL+ +Y P G V L F++ +R T+
Sbjct: 66 RHPNILRLYGYF---HDSTRV---YLILEYAPLGTVYRELQKLSKFDE-----QRTATY- 113
Query: 425 QRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHL 484
I ++A L+Y H + HRDIK N+LL + ++ADFG S S
Sbjct: 114 -----ITELANALSYCH---SKKVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSR 162
Query: 485 TTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLST 532
+ GT YL PE EK D++S GV+ E + G+ + +T
Sbjct: 163 RAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 210
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 108/235 (45%), Gaps = 31/235 (13%)
Query: 314 KFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLV 372
K+++ IG+G G VY + + G VA++++ NE+ ++ K+ N+V
Sbjct: 22 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIV 81
Query: 373 PLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILD 432
+V G E ++V +Y+ G++ D + + D +A + +
Sbjct: 82 NYLDSYLV------GDELWVVMEYLAGGSLTDVVTETCMDEGQIAA----------VCRE 125
Query: 433 VAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTH 492
+ L +LH + HRDIK+ NILL D ++ DFG Q QS + V GT
Sbjct: 126 CLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV-GTP 181
Query: 493 GYLAPEYALYGQLTEKSDVYSFGVVILEIMCGR---------KALDL-STSGSPR 537
++APE K D++S G++ +E++ G +AL L +T+G+P
Sbjct: 182 YWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPE 236
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 100/218 (45%), Gaps = 29/218 (13%)
Query: 321 IGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQG---DAEFCNEVEIISNLKHRNLVPLRG 376
+G+G FG VY Q +A+K + ++ + + + EVEI S+L+H N++ L G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 377 CCVVDGDNERGSERYLVYDYMPNGNVDDHL--FPSFNDGSGVAKRPLTWPQRKNIILDVA 434
+ YL+ +Y P G V L F++ +R T+ I ++A
Sbjct: 80 YF------HDATRVYLILEYAPLGTVYRELQKLSRFDE-----QRTATY------ITELA 122
Query: 435 KGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGY 494
L+Y H + HRDIK N+LL ++ ++ADFG S S T + GT Y
Sbjct: 123 NALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGW---SVHAPSSRRTTLCGTLDY 176
Query: 495 LAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLST 532
L PE EK D++S GV+ E + G + T
Sbjct: 177 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHT 214
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 103/213 (48%), Gaps = 26/213 (12%)
Query: 318 KNFIGRGGFGLVYKGILQ----DGTTVAVK--KVIESDFQGDAEFCNEVEIISNLKHRNL 371
+ IG G FG V G L+ VA+K K +D Q +F +E I+ H N+
Sbjct: 19 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQ-RRDFLSEASIMGQFDHPNI 77
Query: 372 VPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIIL 431
+ L G + ++ +YM NG++D F NDG T Q ++
Sbjct: 78 IHLEGVVT------KCKPVMIITEYMENGSLD--AFLRKNDGR------FTVIQLVGMLR 123
Query: 432 DVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQ-SREGQSHLTTRVAG 490
+ G+ YL + HRD+ A NIL+++++ +V+DFG+++ + ++ TTR
Sbjct: 124 GIGSGMKYLS---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGK 180
Query: 491 TH-GYLAPEYALYGQLTEKSDVYSFGVVILEIM 522
+ APE Y + T SDV+S+G+V+ E+M
Sbjct: 181 IPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVM 213
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 100/220 (45%), Gaps = 22/220 (10%)
Query: 312 TDKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQGDAEFC----NEVEIISNL 366
+D++ +G GG V+ L+ VAVK V+ +D D F E + + L
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVK-VLRADLARDPSFYLRFRREAQNAAAL 69
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQR 426
H +V + + + G Y+V +Y+ + D + + P+T +
Sbjct: 70 NHPAIVAVYATG--EAETPAGPLPYIVMEYVDGVTLRDIVH---------TEGPMTPKRA 118
Query: 427 KNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTT 486
+I D + L + H I HRD+K NI++ A +V DFG+A+ + + +T
Sbjct: 119 IEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ 175
Query: 487 RVA--GTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
A GT YL+PE A + +SDVYS G V+ E++ G
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 104/228 (45%), Gaps = 29/228 (12%)
Query: 311 ATDKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQG---DAEFCNEVEIISNL 366
A + F +G+G FG VY Q +A+K + ++ + + + EVEI S+L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHL--FPSFNDGSGVAKRPLTWP 424
+H N++ L G + YL+ +Y P G V L F++ +R T+
Sbjct: 69 RHPNILRLYGYF------HDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATY- 116
Query: 425 QRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHL 484
I ++A L+Y H + HRDIK N+LL + ++A+FG S S
Sbjct: 117 -----ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGW---SVHAPSSR 165
Query: 485 TTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLST 532
T + GT YL PE EK D++S GV+ E + G+ + +T
Sbjct: 166 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 213
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 109/220 (49%), Gaps = 23/220 (10%)
Query: 313 DKFSQKNFIGRGGFGLVYKGILQ-DGTTVAVKKV-IESDFQG-DAEFCNEVEIISNLKHR 369
+ F + IG G +G+VYK + G VA+KK+ ++++ +G + E+ ++ L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 370 NLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNI 429
N+V L V+ +N+ YLV++++ F D S + PL P K+
Sbjct: 63 NIVKL--LDVIHTENKL----YLVFEFLHQD------LKKFMDASALTGIPL--PLIKSY 108
Query: 430 ILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVA 489
+ + +GLA+ H + HRD+K N+L++ + ++ADFGLA+ T V
Sbjct: 109 LFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 165
Query: 490 GTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMCGRKAL 528
T Y APE L + + D++S G + E M R+AL
Sbjct: 166 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAE-MVTRRAL 203
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 109/220 (49%), Gaps = 23/220 (10%)
Query: 313 DKFSQKNFIGRGGFGLVYKGILQ-DGTTVAVKKV-IESDFQG-DAEFCNEVEIISNLKHR 369
+ F + IG G +G+VYK + G VA+KK+ ++++ +G + E+ ++ L H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 370 NLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNI 429
N+V L V+ +N+ YLV++++ F D S + PL P K+
Sbjct: 70 NIVKL--LDVIHTENKL----YLVFEFLHQD------LKKFMDASALTGIPL--PLIKSY 115
Query: 430 ILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVA 489
+ + +GLA+ H + HRD+K N+L++ + ++ADFGLA+ T V
Sbjct: 116 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 172
Query: 490 GTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMCGRKAL 528
T Y APE L + + D++S G + E M R+AL
Sbjct: 173 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAE-MVTRRAL 210
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 109/220 (49%), Gaps = 23/220 (10%)
Query: 313 DKFSQKNFIGRGGFGLVYKGILQ-DGTTVAVKKV-IESDFQG-DAEFCNEVEIISNLKHR 369
+ F + IG G +G+VYK + G VA+KK+ ++++ +G + E+ ++ L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 370 NLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNI 429
N+V L V+ +N+ YLV++++ F D S + PL P K+
Sbjct: 62 NIVKL--LDVIHTENKL----YLVFEFLHQD------LKKFMDASALTGIPL--PLIKSY 107
Query: 430 ILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVA 489
+ + +GLA+ H + HRD+K N+L++ + ++ADFGLA+ T V
Sbjct: 108 LFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 164
Query: 490 GTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMCGRKAL 528
T Y APE L + + D++S G + E M R+AL
Sbjct: 165 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAE-MVTRRAL 202
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 109/220 (49%), Gaps = 23/220 (10%)
Query: 313 DKFSQKNFIGRGGFGLVYKGILQ-DGTTVAVKKV-IESDFQG-DAEFCNEVEIISNLKHR 369
+ F + IG G +G+VYK + G VA+KK+ ++++ +G + E+ ++ L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 370 NLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNI 429
N+V L V+ +N+ YLV++++ F D S + PL P K+
Sbjct: 63 NIVKL--LDVIHTENKL----YLVFEFLHQD------LKKFMDASALTGIPL--PLIKSY 108
Query: 430 ILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVA 489
+ + +GLA+ H + HRD+K N+L++ + ++ADFGLA+ T V
Sbjct: 109 LFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 165
Query: 490 GTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMCGRKAL 528
T Y APE L + + D++S G + E M R+AL
Sbjct: 166 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAE-MVTRRAL 203
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 110/225 (48%), Gaps = 28/225 (12%)
Query: 314 KFSQKNFIGRGGFGLVYKGI-LQDGTTV----AVKKVIESDF-QGDAEFCNEVEIISNLK 367
+F + +G G FG VYKG+ + +G V A+K++ E+ + + E +E +++++
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 368 HRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRK 427
+ ++ L G C+ S L+ MP G + D++ D G ++ L W
Sbjct: 76 NPHVCRLLGICLT-------STVQLITQLMPFGXLLDYVR-EHKDNIG-SQYLLNW---- 122
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAK--QSREGQSHLT 485
+ +AKG+ YL + HRD+ A N+L+ ++ DFGLAK + E + H
Sbjct: 123 --CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 177
Query: 486 TRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMC-GRKALD 529
++A E L+ T +SDV+S+GV + E+M G K D
Sbjct: 178 GGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 109/220 (49%), Gaps = 23/220 (10%)
Query: 313 DKFSQKNFIGRGGFGLVYKGILQ-DGTTVAVKKV-IESDFQG-DAEFCNEVEIISNLKHR 369
+ F + IG G +G+VYK + G VA+KK+ ++++ +G + E+ ++ L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 370 NLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNI 429
N+V L V+ +N+ YLV++++ F D S + PL P K+
Sbjct: 62 NIVKL--LDVIHTENKL----YLVFEFLHQD------LKKFMDASALTGIPL--PLIKSY 107
Query: 430 ILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVA 489
+ + +GLA+ H + HRD+K N+L++ + ++ADFGLA+ T V
Sbjct: 108 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 164
Query: 490 GTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMCGRKAL 528
T Y APE L + + D++S G + E M R+AL
Sbjct: 165 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAE-MVTRRAL 202
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 103/213 (48%), Gaps = 26/213 (12%)
Query: 318 KNFIGRGGFGLVYKGILQ----DGTTVAVK--KVIESDFQGDAEFCNEVEIISNLKHRNL 371
+ IG G FG V G L+ VA+K K +D Q +F +E I+ H N+
Sbjct: 13 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQ-RRDFLSEASIMGQFDHPNI 71
Query: 372 VPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIIL 431
+ L G + ++ +YM NG++D F NDG T Q ++
Sbjct: 72 IHLEGVVT------KCKPVMIITEYMENGSLD--AFLRKNDGR------FTVIQLVGMLR 117
Query: 432 DVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQ-SREGQSHLTTRVAG 490
+ G+ YL + HRD+ A NIL+++++ +V+DFG+++ + ++ TTR
Sbjct: 118 GIGSGMKYLS---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGK 174
Query: 491 TH-GYLAPEYALYGQLTEKSDVYSFGVVILEIM 522
+ APE Y + T SDV+S+G+V+ E+M
Sbjct: 175 IPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVM 207
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 103/228 (45%), Gaps = 29/228 (12%)
Query: 311 ATDKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQG---DAEFCNEVEIISNL 366
A + F +G+G FG VY Q +A+K + ++ + + + EVEI S+L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHL--FPSFNDGSGVAKRPLTWP 424
+H N++ L G + YL+ +Y P G V L F++ +R T+
Sbjct: 68 RHPNILRLYGYF------HDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATY- 115
Query: 425 QRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHL 484
I ++A L+Y H + HRDIK N+LL + ++ADFG S S
Sbjct: 116 -----ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSR 164
Query: 485 TTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLST 532
+ GT YL PE EK D++S GV+ E + G+ + +T
Sbjct: 165 RXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 212
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 103/228 (45%), Gaps = 29/228 (12%)
Query: 311 ATDKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQG---DAEFCNEVEIISNL 366
A + F +G+G FG VY Q +A+K + ++ + + + EVEI S+L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHL--FPSFNDGSGVAKRPLTWP 424
+H N++ L G + YL+ +Y P G V L F++ +R T+
Sbjct: 69 RHPNILRLYGYF------HDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATY- 116
Query: 425 QRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHL 484
I ++A L+Y H + HRDIK N+LL + ++ADFG S S
Sbjct: 117 -----ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSR 165
Query: 485 TTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLST 532
+ GT YL PE EK D++S GV+ E + G+ + +T
Sbjct: 166 RAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 213
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 110/220 (50%), Gaps = 23/220 (10%)
Query: 313 DKFSQKNFIGRGGFGLVYKGILQ-DGTTVAVKKV-IESDFQG-DAEFCNEVEIISNLKHR 369
+ F + IG G +G+VYK + G VA+KK+ ++++ +G + E+ ++ L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 370 NLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNI 429
N+V L V+ +N+ YLV++++ +F D S + PL P K+
Sbjct: 62 NIVKL--LDVIHTENKL----YLVFEHVHQD------LKTFMDASALTGIPL--PLIKSY 107
Query: 430 ILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVA 489
+ + +GLA+ H + HRD+K N+L++ + ++ADFGLA+ T V
Sbjct: 108 LFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 164
Query: 490 GTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMCGRKAL 528
T Y APE L + + D++S G + E M R+AL
Sbjct: 165 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAE-MVTRRAL 202
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 26/216 (12%)
Query: 315 FSQKNFIGRGGFGLVYKGILQ----DGTTVAVK--KVIESDFQGDAEFCNEVEIISNLKH 368
S +G G FG V G L+ +VA+K KV ++ Q +F E I+ H
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQFDH 105
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKN 428
N++ L G + +V +YM NG++D F +D T Q
Sbjct: 106 PNIIRLEGVVT------KSKPVMIVTEYMENGSLDS--FLRKHDAQ------FTVIQLVG 151
Query: 429 IILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQ-SREGQSHLTTR 487
++ +A G+ YL HRD+ A NIL+++++ +V+DFGL++ + ++ TTR
Sbjct: 152 MLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
Query: 488 VAGTH-GYLAPEYALYGQLTEKSDVYSFGVVILEIM 522
+ +PE Y + T SDV+S+G+V+ E+M
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 103/228 (45%), Gaps = 29/228 (12%)
Query: 311 ATDKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQG---DAEFCNEVEIISNL 366
A + F +G+G FG VY Q +A+K + ++ + + + EVEI S+L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHL--FPSFNDGSGVAKRPLTWP 424
+H N++ L G + YL+ +Y P G V L F++ +R T+
Sbjct: 66 RHPNILRLYGYF------HDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATY- 113
Query: 425 QRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHL 484
I ++A L+Y H + HRDIK N+LL + ++ADFG S S
Sbjct: 114 -----ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSR 162
Query: 485 TTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLST 532
+ GT YL PE EK D++S GV+ E + G+ + +T
Sbjct: 163 RAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 210
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 109/220 (49%), Gaps = 23/220 (10%)
Query: 313 DKFSQKNFIGRGGFGLVYKGILQ-DGTTVAVKKV-IESDFQG-DAEFCNEVEIISNLKHR 369
+ F + IG G +G+VYK + G VA+KK+ ++++ +G + E+ ++ L H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 370 NLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNI 429
N+V L V+ +N+ YLV++++ F D S + PL P K+
Sbjct: 67 NIVKL--LDVIHTENKL----YLVFEFLHQD------LKKFMDASALTGIPL--PLIKSY 112
Query: 430 ILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVA 489
+ + +GLA+ H + HRD+K N+L++ + ++ADFGLA+ T V
Sbjct: 113 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 169
Query: 490 GTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMCGRKAL 528
T Y APE L + + D++S G + E M R+AL
Sbjct: 170 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAE-MVTRRAL 207
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 26/216 (12%)
Query: 315 FSQKNFIGRGGFGLVYKGILQ----DGTTVAVK--KVIESDFQGDAEFCNEVEIISNLKH 368
S +G G FG V G L+ +VA+K KV ++ Q +F E I+ H
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQFDH 105
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKN 428
N++ L G + +V +YM NG++D F +D T Q
Sbjct: 106 PNIIRLEGVVT------KSKPVMIVTEYMENGSLDS--FLRKHDAQ------FTVIQLVG 151
Query: 429 IILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQ-SREGQSHLTTR 487
++ +A G+ YL HRD+ A NIL+++++ +V+DFGL++ + ++ TTR
Sbjct: 152 MLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
Query: 488 VAGTH-GYLAPEYALYGQLTEKSDVYSFGVVILEIM 522
+ +PE Y + T SDV+S+G+V+ E+M
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 26/216 (12%)
Query: 315 FSQKNFIGRGGFGLVYKGILQ----DGTTVAVK--KVIESDFQGDAEFCNEVEIISNLKH 368
S +G G FG V G L+ +VA+K KV ++ Q +F E I+ H
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQFDH 105
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKN 428
N++ L G + +V +YM NG++D F +D T Q
Sbjct: 106 PNIIRLEGVVT------KSKPVMIVTEYMENGSLDS--FLRKHDAQ------FTVIQLVG 151
Query: 429 IILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQ-SREGQSHLTTR 487
++ +A G+ YL HRD+ A NIL+++++ +V+DFGL++ + ++ TTR
Sbjct: 152 MLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
Query: 488 VAGTH-GYLAPEYALYGQLTEKSDVYSFGVVILEIM 522
+ +PE Y + T SDV+S+G+V+ E+M
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 103/228 (45%), Gaps = 29/228 (12%)
Query: 311 ATDKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQG---DAEFCNEVEIISNL 366
A + F +G+G FG VY Q +A+K + ++ + + + EVEI S+L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHL--FPSFNDGSGVAKRPLTWP 424
+H N++ L G + YL+ +Y P G V L F++ +R T+
Sbjct: 69 RHPNILRLYGYF------HDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATY- 116
Query: 425 QRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHL 484
I ++A L+Y H + HRDIK N+LL + ++ADFG S S
Sbjct: 117 -----ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSR 165
Query: 485 TTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLST 532
+ GT YL PE EK D++S GV+ E + G+ + +T
Sbjct: 166 RXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 213
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 110/225 (48%), Gaps = 28/225 (12%)
Query: 314 KFSQKNFIGRGGFGLVYKGI-LQDGTTV----AVKKVIE-SDFQGDAEFCNEVEIISNLK 367
+F + +G G FG VYKG+ + +G V A+K++ E + + + E +E +++++
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 368 HRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRK 427
+ ++ L G C+ S L+ MP G + D++ D G ++ L W
Sbjct: 80 NPHVCRLLGICLT-------STVQLIMQLMPFGCLLDYVR-EHKDNIG-SQYLLNW---- 126
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAK--QSREGQSHLT 485
+ +AKG+ YL + HRD+ A N+L+ ++ DFGLAK + E + H
Sbjct: 127 --CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 181
Query: 486 TRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMC-GRKALD 529
++A E L+ T +SDV+S+GV + E+M G K D
Sbjct: 182 GGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 26/216 (12%)
Query: 315 FSQKNFIGRGGFGLVYKGILQ----DGTTVAVK--KVIESDFQGDAEFCNEVEIISNLKH 368
S +G G FG V G L+ +VA+K KV ++ Q +F E I+ H
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQFDH 105
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKN 428
N++ L G + +V +YM NG++D F +D T Q
Sbjct: 106 PNIIRLEGVVT------KSKPVMIVTEYMENGSLDS--FLRKHDAQ------FTVIQLVG 151
Query: 429 IILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQ-SREGQSHLTTR 487
++ +A G+ YL HRD+ A NIL+++++ +V+DFGL++ + ++ TTR
Sbjct: 152 MLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
Query: 488 VAGTH-GYLAPEYALYGQLTEKSDVYSFGVVILEIM 522
+ +PE Y + T SDV+S+G+V+ E+M
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 103/228 (45%), Gaps = 29/228 (12%)
Query: 311 ATDKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQG---DAEFCNEVEIISNL 366
A + F +G+G FG VY Q +A+K + ++ + + + EVEI S+L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHL--FPSFNDGSGVAKRPLTWP 424
+H N++ L G + YL+ +Y P G V L F++ +R T+
Sbjct: 66 RHPNILRLYGYF------HDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATY- 113
Query: 425 QRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHL 484
I ++A L+Y H + HRDIK N+LL + ++ADFG S S
Sbjct: 114 -----ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSR 162
Query: 485 TTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLST 532
+ GT YL PE EK D++S GV+ E + G+ + +T
Sbjct: 163 RXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 210
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 110/225 (48%), Gaps = 28/225 (12%)
Query: 314 KFSQKNFIGRGGFGLVYKGI-LQDGTTV----AVKKVIESDF-QGDAEFCNEVEIISNLK 367
+F + +G G FG VYKG+ + +G V A+K++ E+ + + E +E +++++
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 368 HRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRK 427
+ ++ L G C+ S L+ MP G + D++ D G ++ L W
Sbjct: 78 NPHVCRLLGICLT-------STVQLIMQLMPFGCLLDYVR-EHKDNIG-SQYLLNW---- 124
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAK--QSREGQSHLT 485
+ +AKG+ YL + HRD+ A N+L+ ++ DFGLAK + E + H
Sbjct: 125 --CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 179
Query: 486 TRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMC-GRKALD 529
++A E L+ T +SDV+S+GV + E+M G K D
Sbjct: 180 GGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 98/214 (45%), Gaps = 26/214 (12%)
Query: 318 KNFIGRGGFGLVYKGIL----QDGTTVAVK--KVIESDFQGDAEFCNEVEIISNLKHRNL 371
+ IG G G V G L Q VA+K K ++ Q +F +E I+ H N+
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQ-RRDFLSEASIMGQFDHPNI 112
Query: 372 VPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIIL 431
+ L G RG +V +YM NG++D F +DG T Q ++
Sbjct: 113 IRLEGVVT------RGRLAMIVTEYMENGSLD--TFLRTHDGQ------FTIMQLVGMLR 158
Query: 432 DVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGT 491
V G+ YL HRD+ A N+L+D+++ +V+DFGL++ + T G
Sbjct: 159 GVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGK 215
Query: 492 --HGYLAPEYALYGQLTEKSDVYSFGVVILEIMC 523
+ APE + + SDV+SFGVV+ E++
Sbjct: 216 IPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 110/225 (48%), Gaps = 28/225 (12%)
Query: 314 KFSQKNFIGRGGFGLVYKGI-LQDGTTV----AVKKVIESDF-QGDAEFCNEVEIISNLK 367
+F + +G G FG VYKG+ + +G V A+K++ E+ + + E +E +++++
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 368 HRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRK 427
+ ++ L G C+ S L+ MP G + D++ D G ++ L W
Sbjct: 79 NPHVCRLLGICLT-------STVQLIMQLMPFGCLLDYVR-EHKDNIG-SQYLLNW---- 125
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAK--QSREGQSHLT 485
+ +AKG+ YL + HRD+ A N+L+ ++ DFGLAK + E + H
Sbjct: 126 --CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 180
Query: 486 TRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMC-GRKALD 529
++A E L+ T +SDV+S+GV + E+M G K D
Sbjct: 181 GGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 110/225 (48%), Gaps = 28/225 (12%)
Query: 314 KFSQKNFIGRGGFGLVYKGI-LQDGTTV----AVKKVIESDF-QGDAEFCNEVEIISNLK 367
+F + +G G FG VYKG+ + +G V A+K++ E+ + + E +E +++++
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 368 HRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRK 427
+ ++ L G C+ S L+ MP G + D++ D G ++ L W
Sbjct: 77 NPHVCRLLGICLT-------STVQLIMQLMPFGCLLDYVR-EHKDNIG-SQYLLNW---- 123
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAK--QSREGQSHLT 485
+ +AKG+ YL + HRD+ A N+L+ ++ DFGLAK + E + H
Sbjct: 124 --CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 178
Query: 486 TRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMC-GRKALD 529
++A E L+ T +SDV+S+GV + E+M G K D
Sbjct: 179 GGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 26/216 (12%)
Query: 315 FSQKNFIGRGGFGLVYKGILQ----DGTTVAVK--KVIESDFQGDAEFCNEVEIISNLKH 368
S +G G FG V G L+ +VA+K KV ++ Q +F E I+ H
Sbjct: 45 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQFDH 103
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKN 428
N++ L G + +V +YM NG++D F +D T Q
Sbjct: 104 PNIIRLEGVVT------KSKPVMIVTEYMENGSLDS--FLRKHDAQ------FTVIQLVG 149
Query: 429 IILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQ-SREGQSHLTTR 487
++ +A G+ YL HRD+ A NIL+++++ +V+DFGL++ + ++ TTR
Sbjct: 150 MLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 206
Query: 488 VAGTH-GYLAPEYALYGQLTEKSDVYSFGVVILEIM 522
+ +PE Y + T SDV+S+G+V+ E+M
Sbjct: 207 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 242
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 102/216 (47%), Gaps = 26/216 (12%)
Query: 315 FSQKNFIGRGGFGLVYKGILQ----DGTTVAVK--KVIESDFQGDAEFCNEVEIISNLKH 368
S +G G FG V G L+ +VA+K KV ++ Q +F E I+ H
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQFDH 105
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKN 428
N++ L G + +V +YM NG++D F +D T Q
Sbjct: 106 PNIIRLEGVVT------KSKPVMIVTEYMENGSLDS--FLRKHDAQ------FTVIQLVG 151
Query: 429 IILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQ-SREGQSHLTTR 487
++ +A G+ YL HRD+ A NIL+++++ +V+DFGL + + ++ TTR
Sbjct: 152 MLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTR 208
Query: 488 VAGTH-GYLAPEYALYGQLTEKSDVYSFGVVILEIM 522
+ +PE Y + T SDV+S+G+V+ E+M
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 100/220 (45%), Gaps = 22/220 (10%)
Query: 312 TDKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQGDAEFC----NEVEIISNL 366
+D++ +G GG V+ L+ VAVK V+ +D D F E + + L
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVK-VLRADLARDPSFYLRFRREAQNAAAL 69
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQR 426
H +V + + + G Y+V +Y+ + D + + P+T +
Sbjct: 70 NHPAIVAVYDTG--EAETPAGPLPYIVMEYVDGVTLRDIVH---------TEGPMTPKRA 118
Query: 427 KNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTT 486
+I D + L + H I HRD+K NI++ A +V DFG+A+ + + +T
Sbjct: 119 IEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ 175
Query: 487 RVA--GTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
A GT YL+PE A + +SDVYS G V+ E++ G
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 110/225 (48%), Gaps = 28/225 (12%)
Query: 314 KFSQKNFIGRGGFGLVYKGI-LQDGTTV----AVKKVIESDF-QGDAEFCNEVEIISNLK 367
+F + +G G FG VYKG+ + +G V A+K++ E+ + + E +E +++++
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 368 HRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRK 427
+ ++ L G C+ S L+ MP G + D++ D G ++ L W
Sbjct: 76 NPHVCRLLGICLT-------STVQLIMQLMPFGCLLDYVR-EHKDNIG-SQYLLNW---- 122
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAK--QSREGQSHLT 485
+ +AKG+ YL + HRD+ A N+L+ ++ DFGLAK + E + H
Sbjct: 123 --CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 177
Query: 486 TRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMC-GRKALD 529
++A E L+ T +SDV+S+GV + E+M G K D
Sbjct: 178 GGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 103/228 (45%), Gaps = 29/228 (12%)
Query: 311 ATDKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQG---DAEFCNEVEIISNL 366
A + F +G+G FG VY Q +A+K + ++ + + + EVEI S+L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHL--FPSFNDGSGVAKRPLTWP 424
+H N++ L G + YL+ +Y P G V L F++ +R T+
Sbjct: 67 RHPNILRLYGYF------HDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATY- 114
Query: 425 QRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHL 484
I ++A L+Y H + HRDIK N+LL + ++ADFG S S
Sbjct: 115 -----ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSR 163
Query: 485 TTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLST 532
+ GT YL PE EK D++S GV+ E + G+ + +T
Sbjct: 164 RDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 211
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 110/225 (48%), Gaps = 28/225 (12%)
Query: 314 KFSQKNFIGRGGFGLVYKGI-LQDGTTV----AVKKVIESDF-QGDAEFCNEVEIISNLK 367
+F + +G G FG VYKG+ + +G V A+K++ E+ + + E +E +++++
Sbjct: 10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 69
Query: 368 HRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRK 427
+ ++ L G C+ S L+ MP G + D++ D G ++ L W
Sbjct: 70 NPHVCRLLGICLT-------STVQLITQLMPFGCLLDYVR-EHKDNIG-SQYLLNW---- 116
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAK--QSREGQSHLT 485
+ +AKG+ YL + HRD+ A N+L+ ++ DFGLAK + E + H
Sbjct: 117 --CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 171
Query: 486 TRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMC-GRKALD 529
++A E L+ T +SDV+S+GV + E+M G K D
Sbjct: 172 GGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 215
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 110/225 (48%), Gaps = 28/225 (12%)
Query: 314 KFSQKNFIGRGGFGLVYKGI-LQDGTTV----AVKKVIESDF-QGDAEFCNEVEIISNLK 367
+F + +G G FG VYKG+ + +G V A+K++ E+ + + E +E +++++
Sbjct: 22 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 81
Query: 368 HRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRK 427
+ ++ L G C+ S L+ MP G + D++ D G ++ L W
Sbjct: 82 NPHVCRLLGICLT-------STVQLITQLMPFGCLLDYVR-EHKDNIG-SQYLLNW---- 128
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAK--QSREGQSHLT 485
+ +AKG+ YL + HRD+ A N+L+ ++ DFGLAK + E + H
Sbjct: 129 --CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 183
Query: 486 TRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMC-GRKALD 529
++A E L+ T +SDV+S+GV + E+M G K D
Sbjct: 184 GGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 227
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 110/225 (48%), Gaps = 28/225 (12%)
Query: 314 KFSQKNFIGRGGFGLVYKGI-LQDGTTV----AVKKVIESDF-QGDAEFCNEVEIISNLK 367
+F + +G G FG VYKG+ + +G V A+K++ E+ + + E +E +++++
Sbjct: 26 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 85
Query: 368 HRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRK 427
+ ++ L G C+ S L+ MP G + D++ D G ++ L W
Sbjct: 86 NPHVCRLLGICLT-------STVQLITQLMPFGCLLDYVR-EHKDNIG-SQYLLNW---- 132
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAK--QSREGQSHLT 485
+ +AKG+ YL + HRD+ A N+L+ ++ DFGLAK + E + H
Sbjct: 133 --CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 187
Query: 486 TRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMC-GRKALD 529
++A E L+ T +SDV+S+GV + E+M G K D
Sbjct: 188 GGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 231
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 110/225 (48%), Gaps = 28/225 (12%)
Query: 314 KFSQKNFIGRGGFGLVYKGI-LQDGTTV----AVKKVIESDF-QGDAEFCNEVEIISNLK 367
+F + +G G FG VYKG+ + +G V A+K++ E+ + + E +E +++++
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 368 HRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRK 427
+ ++ L G C+ S L+ MP G + D++ D G ++ L W
Sbjct: 78 NPHVCRLLGICLT-------STVQLITQLMPFGCLLDYVR-EHKDNIG-SQYLLNW---- 124
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAK--QSREGQSHLT 485
+ +AKG+ YL + HRD+ A N+L+ ++ DFGLAK + E + H
Sbjct: 125 --CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 179
Query: 486 TRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMC-GRKALD 529
++A E L+ T +SDV+S+GV + E+M G K D
Sbjct: 180 GGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 110/225 (48%), Gaps = 28/225 (12%)
Query: 314 KFSQKNFIGRGGFGLVYKGI-LQDGTTV----AVKKVIESDF-QGDAEFCNEVEIISNLK 367
+F + +G G FG VYKG+ + +G V A+K++ E+ + + E +E +++++
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 368 HRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRK 427
+ ++ L G C+ S L+ MP G + D++ D G ++ L W
Sbjct: 79 NPHVCRLLGICLT-------STVQLITQLMPFGCLLDYVR-EHKDNIG-SQYLLNW---- 125
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAK--QSREGQSHLT 485
+ +AKG+ YL + HRD+ A N+L+ ++ DFGLAK + E + H
Sbjct: 126 --CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 180
Query: 486 TRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMC-GRKALD 529
++A E L+ T +SDV+S+GV + E+M G K D
Sbjct: 181 GGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 110/225 (48%), Gaps = 28/225 (12%)
Query: 314 KFSQKNFIGRGGFGLVYKGI-LQDGTTV----AVKKVIESDF-QGDAEFCNEVEIISNLK 367
+F + +G G FG VYKG+ + +G V A+K++ E+ + + E +E +++++
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 368 HRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRK 427
+ ++ L G C+ S L+ MP G + D++ D G ++ L W
Sbjct: 79 NPHVCRLLGICLT-------STVQLITQLMPFGCLLDYVR-EHKDNIG-SQYLLNW---- 125
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAK--QSREGQSHLT 485
+ +AKG+ YL + HRD+ A N+L+ ++ DFGLAK + E + H
Sbjct: 126 --CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 180
Query: 486 TRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMC-GRKALD 529
++A E L+ T +SDV+S+GV + E+M G K D
Sbjct: 181 GGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 110/225 (48%), Gaps = 28/225 (12%)
Query: 314 KFSQKNFIGRGGFGLVYKGI-LQDGTTV----AVKKVIESDF-QGDAEFCNEVEIISNLK 367
+F + +G G FG VYKG+ + +G V A+K++ E+ + + E +E +++++
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 368 HRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRK 427
+ ++ L G C+ S L+ MP G + D++ D G ++ L W
Sbjct: 79 NPHVCRLLGICLT-------STVQLITQLMPFGCLLDYVR-EHKDNIG-SQYLLNW---- 125
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAK--QSREGQSHLT 485
+ +AKG+ YL + HRD+ A N+L+ ++ DFGLAK + E + H
Sbjct: 126 --CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 180
Query: 486 TRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMC-GRKALD 529
++A E L+ T +SDV+S+GV + E+M G K D
Sbjct: 181 GGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 110/225 (48%), Gaps = 28/225 (12%)
Query: 314 KFSQKNFIGRGGFGLVYKGI-LQDGTTV----AVKKVIESDF-QGDAEFCNEVEIISNLK 367
+F + +G G FG VYKG+ + +G V A+K++ E+ + + E +E +++++
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 368 HRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRK 427
+ ++ L G C+ S L+ MP G + D++ D G ++ L W
Sbjct: 76 NPHVCRLLGICLT-------STVQLITQLMPFGCLLDYVR-EHKDNIG-SQYLLNW---- 122
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAK--QSREGQSHLT 485
+ +AKG+ YL + HRD+ A N+L+ ++ DFGLAK + E + H
Sbjct: 123 --CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 177
Query: 486 TRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMC-GRKALD 529
++A E L+ T +SDV+S+GV + E+M G K D
Sbjct: 178 GGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 110/225 (48%), Gaps = 28/225 (12%)
Query: 314 KFSQKNFIGRGGFGLVYKGI-LQDGTTV----AVKKVIESDF-QGDAEFCNEVEIISNLK 367
+F + +G G FG VYKG+ + +G V A+K++ E+ + + E +E +++++
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 368 HRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRK 427
+ ++ L G C+ S L+ MP G + D++ D G ++ L W
Sbjct: 76 NPHVCRLLGICLT-------STVQLITQLMPFGCLLDYVR-EHKDNIG-SQYLLNW---- 122
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAK--QSREGQSHLT 485
+ +AKG+ YL + HRD+ A N+L+ ++ DFGLAK + E + H
Sbjct: 123 --CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 177
Query: 486 TRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMC-GRKALD 529
++A E L+ T +SDV+S+GV + E+M G K D
Sbjct: 178 GGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 110/225 (48%), Gaps = 28/225 (12%)
Query: 314 KFSQKNFIGRGGFGLVYKGI-LQDGTTV----AVKKVIESDF-QGDAEFCNEVEIISNLK 367
+F + +G G FG VYKG+ + +G V A+K++ E+ + + E +E +++++
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 368 HRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRK 427
+ ++ L G C+ S L+ MP G + D++ D G ++ L W
Sbjct: 83 NPHVCRLLGICLT-------STVQLITQLMPFGCLLDYVR-EHKDNIG-SQYLLNW---- 129
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAK--QSREGQSHLT 485
+ +AKG+ YL + HRD+ A N+L+ ++ DFGLAK + E + H
Sbjct: 130 --CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 184
Query: 486 TRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMC-GRKALD 529
++A E L+ T +SDV+S+GV + E+M G K D
Sbjct: 185 GGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 103/228 (45%), Gaps = 29/228 (12%)
Query: 311 ATDKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQG---DAEFCNEVEIISNL 366
A + F +G+G FG VY Q +A+K + ++ + + + EVEI S+L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHL--FPSFNDGSGVAKRPLTWP 424
+H N++ L G + YL+ +Y P G V L F++ +R T+
Sbjct: 92 RHPNILRLYGYF------HDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATY- 139
Query: 425 QRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHL 484
I ++A L+Y H + HRDIK N+LL + ++ADFG S S
Sbjct: 140 -----ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSR 188
Query: 485 TTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLST 532
+ GT YL PE EK D++S GV+ E + G+ + +T
Sbjct: 189 RDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 236
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 101/220 (45%), Gaps = 22/220 (10%)
Query: 312 TDKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQGDAEFC----NEVEIISNL 366
+D++ +G GG V+ L+ VAVK V+ +D D F E + + L
Sbjct: 28 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVK-VLRADLARDPSFYLRFRREAQNAAAL 86
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQR 426
H +V + + + G Y+V +Y+ + D + + P+T +
Sbjct: 87 NHPAIVAVYDTG--EAETPAGPLPYIVMEYVDGVTLRDIVH---------TEGPMTPKRA 135
Query: 427 KNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTT 486
+I D + L + H + I HRD+K NI++ A +V DFG+A+ + + +T
Sbjct: 136 IEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ 192
Query: 487 RVA--GTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
A GT YL+PE A + +SDVYS G V+ E++ G
Sbjct: 193 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 232
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 97/206 (47%), Gaps = 23/206 (11%)
Query: 321 IGRGGFGLVYKGILQD-GTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPLRGCCV 379
IG G G+V + G VAVKK+ Q NEV I+ + H N+V + +
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 380 VDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLAY 439
V G E ++V +++ G + D V + Q + L V + L+Y
Sbjct: 113 V------GDELWVVMEFLEGGALTD----------IVTHTRMNEEQIATVCLSVLRALSY 156
Query: 440 LHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQ-SREGQSHLTTRVAGTHGYLAPE 498
LH + HRDIK+ +ILL +D R +++DFG Q S+E + GT ++APE
Sbjct: 157 LH---NQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKR--KXLVGTPYWMAPE 211
Query: 499 YALYGQLTEKSDVYSFGVVILEIMCG 524
+ D++S G++++E++ G
Sbjct: 212 VISRLPYGTEVDIWSLGIMVIEMIDG 237
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 103/228 (45%), Gaps = 29/228 (12%)
Query: 311 ATDKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQG---DAEFCNEVEIISNL 366
A + F +G+G FG VY Q +A+K + ++ + + + EVEI S+L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHL--FPSFNDGSGVAKRPLTWP 424
+H N++ L G + YL+ +Y P G V L F++ +R T+
Sbjct: 69 RHPNILRLYGYF------HDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATY- 116
Query: 425 QRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHL 484
I ++A L+Y H + HRDIK N+LL + ++ADFG S S
Sbjct: 117 -----ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW---SVHAPSSR 165
Query: 485 TTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLST 532
+ GT YL PE EK D++S GV+ E + G+ + +T
Sbjct: 166 RDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 213
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 110/225 (48%), Gaps = 28/225 (12%)
Query: 314 KFSQKNFIGRGGFGLVYKGI-LQDGTTV----AVKKVIESDF-QGDAEFCNEVEIISNLK 367
+F + +G G FG VYKG+ + +G V A+K++ E+ + + E +E +++++
Sbjct: 41 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 100
Query: 368 HRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRK 427
+ ++ L G C+ S L+ MP G + D++ D G ++ L W
Sbjct: 101 NPHVCRLLGICLT-------STVQLITQLMPFGCLLDYVR-EHKDNIG-SQYLLNW---- 147
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAK--QSREGQSHLT 485
+ +AKG+ YL + HRD+ A N+L+ ++ DFGLAK + E + H
Sbjct: 148 --CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 202
Query: 486 TRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMC-GRKALD 529
++A E L+ T +SDV+S+GV + E+M G K D
Sbjct: 203 GGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 246
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 103/213 (48%), Gaps = 26/213 (12%)
Query: 318 KNFIGRGGFGLVYKGILQ----DGTTVAVK--KVIESDFQGDAEFCNEVEIISNLKHRNL 371
+ IG G FG V G L+ VA+K KV ++ Q +F E I+ H N+
Sbjct: 27 ERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQ-RRDFLGEASIMGQFDHPNI 85
Query: 372 VPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIIL 431
+ L G + +V +YM NG++D F NDG T Q ++
Sbjct: 86 IHLEGVVT------KSKPVMIVTEYMENGSLD--TFLKKNDGQ------FTVIQLVGMLR 131
Query: 432 DVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQ-SREGQSHLTTRVAG 490
++ G+ YL HRD+ A NIL+++++ +V+DFGL++ + ++ TTR
Sbjct: 132 GISAGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 188
Query: 491 TH-GYLAPEYALYGQLTEKSDVYSFGVVILEIM 522
+ APE + + T SDV+S+G+V+ E++
Sbjct: 189 IPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVV 221
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 110/222 (49%), Gaps = 23/222 (10%)
Query: 311 ATDKFSQKNFIGRGGFGLVYKGILQ-DGTTVAVKKV-IESDFQG-DAEFCNEVEIISNLK 367
+ + F + IG G +G+VYK + G VA+KK+ ++++ +G + E+ ++ L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 368 HRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRK 427
H N+V L V+ +N+ YLV++++ D F D S + PL P K
Sbjct: 64 HPNIVKL--LDVIHTENKL----YLVFEHV------DQDLKKFMDASALTGIPL--PLIK 109
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+ + + +GLA+ H + HRD+K N+L++ + ++ADFGLA+
Sbjct: 110 SYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE 166
Query: 488 VAGTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMCGRKAL 528
V T Y APE L + + D++S G + E M R+AL
Sbjct: 167 VV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAE-MVTRRAL 206
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 110/222 (49%), Gaps = 23/222 (10%)
Query: 311 ATDKFSQKNFIGRGGFGLVYKGILQ-DGTTVAVKKV-IESDFQG-DAEFCNEVEIISNLK 367
+ + F + IG G +G+VYK + G VA+KK+ ++++ +G + E+ ++ L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 368 HRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRK 427
H N+V L V+ +N+ YLV++++ D F D S + PL P K
Sbjct: 61 HPNIVKL--LDVIHTENKL----YLVFEFLHQDLKD------FMDASALTGIPL--PLIK 106
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+ + + +GLA+ H + HRD+K N+L++ + ++ADFGLA+
Sbjct: 107 SYLFQLLQGLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHE 163
Query: 488 VAGTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMCGRKAL 528
V T Y APE L + + D++S G + E M R+AL
Sbjct: 164 VV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAE-MVTRRAL 203
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 109/220 (49%), Gaps = 23/220 (10%)
Query: 313 DKFSQKNFIGRGGFGLVYKGILQ-DGTTVAVKKV-IESDFQG-DAEFCNEVEIISNLKHR 369
+ F + IG G +G+VYK + G VA+KK+ ++++ +G + E+ ++ L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 370 NLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNI 429
N+V L V+ +N+ YLV++++ F D S + PL P K+
Sbjct: 63 NIVKL--LDVIHTENKL----YLVFEFLHQD------LKKFMDASALTGIPL--PLIKSY 108
Query: 430 ILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVA 489
+ + +GL++ H + HRD+K N+L++ + ++ADFGLA+ T V
Sbjct: 109 LFQLLQGLSFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 165
Query: 490 GTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMCGRKAL 528
T Y APE L + + D++S G + E M R+AL
Sbjct: 166 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAE-MVTRRAL 203
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 110/222 (49%), Gaps = 23/222 (10%)
Query: 311 ATDKFSQKNFIGRGGFGLVYKGILQ-DGTTVAVKKV-IESDFQG-DAEFCNEVEIISNLK 367
+ + F + IG G +G+VYK + G VA+KK+ ++++ +G + E+ ++ L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 368 HRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRK 427
H N+V L V+ +N+ YLV++++ +F D S + PL P K
Sbjct: 64 HPNIVKL--LDVIHTENKL----YLVFEFLHQD------LKTFMDASALTGIPL--PLIK 109
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+ + + +GLA+ H + HRD+K N+L++ + ++ADFGLA+
Sbjct: 110 SYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE 166
Query: 488 VAGTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMCGRKAL 528
V T Y APE L + + D++S G + E M R+AL
Sbjct: 167 VV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAE-MVTRRAL 206
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 110/222 (49%), Gaps = 23/222 (10%)
Query: 311 ATDKFSQKNFIGRGGFGLVYKGILQ-DGTTVAVKKV-IESDFQG-DAEFCNEVEIISNLK 367
+ + F + IG G +G+VYK + G VA+KK+ ++++ +G + E+ ++ L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 368 HRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRK 427
H N+V L V+ +N+ YLV++++ D F D S + PL P K
Sbjct: 64 HPNIVKL--LDVIHTENKL----YLVFEFLSMDLKD------FMDASALTGIPL--PLIK 109
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+ + + +GLA+ H + HRD+K N+L++ + ++ADFGLA+
Sbjct: 110 SYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE 166
Query: 488 VAGTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMCGRKAL 528
V T Y APE L + + D++S G + E M R+AL
Sbjct: 167 VV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAE-MVTRRAL 206
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 105/228 (46%), Gaps = 21/228 (9%)
Query: 302 WFKIQDLERATDKFSQKNFIGRGGFGLVYKGILQ-DGTTVAVKKVIESDFQGDAEFCN-- 358
W + Q + D F +GRGGFG V+ ++ G A KK+ + + +
Sbjct: 176 WLEAQPM--GEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAM 233
Query: 359 -EVEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVA 417
E +I++ + R +V L E ++ LV M G++ H++ D G
Sbjct: 234 VEKKILAKVHSRFIVSLAYAF------ETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQ 287
Query: 418 KRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQS 477
+ P+ + GL +LH + I +RD+K N+LLD D R++D GLA +
Sbjct: 288 E-----PRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL 339
Query: 478 REGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGR 525
+ GQ+ T AGT G++APE L + D ++ GV + E++ R
Sbjct: 340 KAGQTK-TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 103/231 (44%), Gaps = 27/231 (11%)
Query: 302 WFKIQDLERATDKFSQKNFIGRGGFGLVYKGILQ-DGTTVA------VKKVIESDFQGDA 354
W + Q + D F +GRGGFG V+ ++ G A + +QG
Sbjct: 176 WLEAQPM--GEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGA- 232
Query: 355 EFCNEVEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGS 414
E +I++ + R +V L E ++ LV M G++ H++ D
Sbjct: 233 --MVEKKILAKVHSRFIVSLAYAF------ETKTDLCLVMTIMNGGDIRYHIYNVDEDNP 284
Query: 415 GVAKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLA 474
G + P+ + GL +LH + I +RD+K N+LLD D R++D GLA
Sbjct: 285 GFQE-----PRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLA 336
Query: 475 KQSREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGR 525
+ + GQ+ T AGT G++APE L + D ++ GV + E++ R
Sbjct: 337 VELKAGQTK-TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 110/222 (49%), Gaps = 23/222 (10%)
Query: 311 ATDKFSQKNFIGRGGFGLVYKGILQ-DGTTVAVKKV-IESDFQG-DAEFCNEVEIISNLK 367
+ + F + IG G +G+VYK + G VA+KK+ ++++ +G + E+ ++ L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 368 HRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRK 427
H N+V L V+ +N+ YLV++++ D F D S + PL P K
Sbjct: 63 HPNIVKL--LDVIHTENKL----YLVFEFLSMDLKD------FMDASALTGIPL--PLIK 108
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+ + + +GLA+ H + HRD+K N+L++ + ++ADFGLA+
Sbjct: 109 SYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE 165
Query: 488 VAGTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMCGRKAL 528
V T Y APE L + + D++S G + E M R+AL
Sbjct: 166 VV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAE-MVTRRAL 205
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 103/231 (44%), Gaps = 27/231 (11%)
Query: 302 WFKIQDLERATDKFSQKNFIGRGGFGLVYKGILQ-DGTTVA------VKKVIESDFQGDA 354
W + Q + D F +GRGGFG V+ ++ G A + +QG
Sbjct: 176 WLEAQPM--GEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGA- 232
Query: 355 EFCNEVEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGS 414
E +I++ + R +V L E ++ LV M G++ H++ D
Sbjct: 233 --MVEKKILAKVHSRFIVSLAYAF------ETKTDLCLVMTIMNGGDIRYHIYNVDEDNP 284
Query: 415 GVAKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLA 474
G + P+ + GL +LH + I +RD+K N+LLD D R++D GLA
Sbjct: 285 GFQE-----PRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLA 336
Query: 475 KQSREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGR 525
+ + GQ+ T AGT G++APE L + D ++ GV + E++ R
Sbjct: 337 VELKAGQTK-TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 103/231 (44%), Gaps = 27/231 (11%)
Query: 302 WFKIQDLERATDKFSQKNFIGRGGFGLVYKGILQ-DGTTVA------VKKVIESDFQGDA 354
W + Q + D F +GRGGFG V+ ++ G A + +QG
Sbjct: 176 WLEAQPM--GEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGA- 232
Query: 355 EFCNEVEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGS 414
E +I++ + R +V L E ++ LV M G++ H++ D
Sbjct: 233 --MVEKKILAKVHSRFIVSLAYAF------ETKTDLCLVMTIMNGGDIRYHIYNVDEDNP 284
Query: 415 GVAKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLA 474
G + P+ + GL +LH + I +RD+K N+LLD D R++D GLA
Sbjct: 285 GFQE-----PRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLA 336
Query: 475 KQSREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGR 525
+ + GQ+ T AGT G++APE L + D ++ GV + E++ R
Sbjct: 337 VELKAGQTK-TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 106/225 (47%), Gaps = 28/225 (12%)
Query: 314 KFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVI-----ESDFQGDAEFCNEVEIISNLK 367
+F + +G G FG VYKG+ + +G V + I + + + E +E +++++
Sbjct: 50 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVD 109
Query: 368 HRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRK 427
+ ++ L G C+ S L+ MP G + D++ D G ++ L W
Sbjct: 110 NPHVCRLLGICLT-------STVQLITQLMPFGCLLDYVR-EHKDNIG-SQYLLNW---- 156
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAK--QSREGQSHLT 485
+ +AKG+ YL + HRD+ A N+L+ ++ DFGLAK + E + H
Sbjct: 157 --CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 211
Query: 486 TRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMC-GRKALD 529
++A E L+ T +SDV+S+GV + E+M G K D
Sbjct: 212 GGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 255
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 109/222 (49%), Gaps = 23/222 (10%)
Query: 311 ATDKFSQKNFIGRGGFGLVYKGILQ-DGTTVAVKKV-IESDFQG-DAEFCNEVEIISNLK 367
+ + F + IG G +G+VYK + G VA+KK+ ++++ +G + E+ ++ L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 368 HRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRK 427
H N+V L V+ +N+ YLV++++ F D S + PL P K
Sbjct: 61 HPNIVKL--LDVIHTENKL----YLVFEFLHQD------LKKFMDASALTGIPL--PLIK 106
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+ + + +GLA+ H + HRD+K N+L++ + ++ADFGLA+
Sbjct: 107 SYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE 163
Query: 488 VAGTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMCGRKAL 528
V T Y APE L + + D++S G + E M R+AL
Sbjct: 164 VV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAE-MVTRRAL 203
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 99/214 (46%), Gaps = 26/214 (12%)
Query: 318 KNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAE-----FCNEVEIISNLKHRNLV 372
+ IG G FG V G L+ + I++ G E F +E I+ H N++
Sbjct: 12 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 71
Query: 373 PLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILD 432
L G + + ++ ++M NG++D F NDG T Q ++
Sbjct: 72 HLEGVVT------KSTPVMIITEFMENGSLDS--FLRQNDGQ------FTVIQLVGMLRG 117
Query: 433 VAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLT-TRVAGT 491
+A G+ YL HR + A NIL+++++ +V+DFGL++ + S T T G
Sbjct: 118 IAAGMKYL---ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGG 174
Query: 492 H---GYLAPEYALYGQLTEKSDVYSFGVVILEIM 522
+ APE Y + T SDV+S+G+V+ E+M
Sbjct: 175 KIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVM 208
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 109/222 (49%), Gaps = 23/222 (10%)
Query: 311 ATDKFSQKNFIGRGGFGLVYKGILQ-DGTTVAVKKV-IESDFQG-DAEFCNEVEIISNLK 367
+ + F + IG G +G+VYK + G VA+KK+ ++++ +G + E+ ++ L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 368 HRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRK 427
H N+V L V+ +N+ YLV++++ F D S + PL P K
Sbjct: 64 HPNIVKL--LDVIHTENKL----YLVFEFLHQD------LKKFMDASALTGIPL--PLIK 109
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+ + + +GLA+ H + HRD+K N+L++ + ++ADFGLA+
Sbjct: 110 SYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE 166
Query: 488 VAGTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMCGRKAL 528
V T Y APE L + + D++S G + E M R+AL
Sbjct: 167 VV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAE-MVTRRAL 206
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 112/222 (50%), Gaps = 23/222 (10%)
Query: 311 ATDKFSQKNFIGRGGFGLVYKGILQ-DGTTVAVKKV-IESDFQG-DAEFCNEVEIISNLK 367
+ + F + IG G +G+VYK + G VA+KK+ ++++ +G + E+ ++ L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 368 HRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRK 427
H N+V L V+ +N+ YLV++++ ++D F D S + PL P K
Sbjct: 64 HPNIVKL--LDVIHTENKL----YLVFEFL---SMD---LKKFMDASALTGIPL--PLIK 109
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+ + + +GLA+ H + HRD+K N+L++ + ++ADFGLA+
Sbjct: 110 SYLFQLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHE 166
Query: 488 VAGTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMCGRKAL 528
V T Y APE L + + D++S G + E M R+AL
Sbjct: 167 VV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAE-MVTRRAL 206
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 109/222 (49%), Gaps = 23/222 (10%)
Query: 311 ATDKFSQKNFIGRGGFGLVYKGILQ-DGTTVAVKKV-IESDFQG-DAEFCNEVEIISNLK 367
+ + F + IG G +G+VYK + G VA+KK+ ++++ +G + E+ ++ L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 368 HRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRK 427
H N+V L V+ +N+ YLV++++ F D S + PL P K
Sbjct: 63 HPNIVKL--LDVIHTENKL----YLVFEFLHQD------LKKFMDASALTGIPL--PLIK 108
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+ + + +GLA+ H + HRD+K N+L++ + ++ADFGLA+
Sbjct: 109 SYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE 165
Query: 488 VAGTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMCGRKAL 528
V T Y APE L + + D++S G + E M R+AL
Sbjct: 166 VV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAE-MVTRRAL 205
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 109/222 (49%), Gaps = 23/222 (10%)
Query: 311 ATDKFSQKNFIGRGGFGLVYKGILQ-DGTTVAVKKV-IESDFQG-DAEFCNEVEIISNLK 367
+ + F + IG G +G+VYK + G VA+KK+ ++++ +G + E+ ++ L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 368 HRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRK 427
H N+V L V+ +N+ YLV++++ F D S + PL P K
Sbjct: 61 HPNIVKL--LDVIHTENKL----YLVFEFLHQD------LKKFMDASALTGIPL--PLIK 106
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+ + + +GLA+ H + HRD+K N+L++ + ++ADFGLA+
Sbjct: 107 SYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE 163
Query: 488 VAGTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMCGRKAL 528
V T Y APE L + + D++S G + E M R+AL
Sbjct: 164 VV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAE-MVTRRAL 203
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 87/184 (47%), Gaps = 34/184 (18%)
Query: 358 NEVEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVA 417
E+ I+ L H N+V L V+D NE Y+V++ + G V + P+
Sbjct: 85 QEIAILKKLDHPNVVKL--VEVLDDPNE--DHLYMVFELVNQGPVME--VPTL------- 131
Query: 418 KRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQS 477
+PL+ Q + D+ KG+ YLHY I HRDIK +N+L+ D ++ADFG++ +
Sbjct: 132 -KPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEF 187
Query: 478 REGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLSTSGSPR 537
+ G L + GT ++APE L+E ++S KALD+ G
Sbjct: 188 K-GSDALLSNTVGTPAFMAPE-----SLSETRKIFS-----------GKALDVWAMGVTL 230
Query: 538 ACLI 541
C +
Sbjct: 231 YCFV 234
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 109/222 (49%), Gaps = 23/222 (10%)
Query: 311 ATDKFSQKNFIGRGGFGLVYKGILQ-DGTTVAVKKV-IESDFQG-DAEFCNEVEIISNLK 367
+ + F + IG G +G+VYK + G VA+KK+ ++++ +G + E+ ++ L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 368 HRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRK 427
H N+V L V+ +N+ YLV++++ F D S + PL P K
Sbjct: 61 HPNIVKL--LDVIHTENKL----YLVFEFLHQD------LKKFMDASALTGIPL--PLIK 106
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+ + + +GLA+ H + HRD+K N+L++ + ++ADFGLA+
Sbjct: 107 SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE 163
Query: 488 VAGTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMCGRKAL 528
V T Y APE L + + D++S G + E M R+AL
Sbjct: 164 VV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAE-MVTRRAL 203
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 109/222 (49%), Gaps = 23/222 (10%)
Query: 311 ATDKFSQKNFIGRGGFGLVYKGILQ-DGTTVAVKKV-IESDFQG-DAEFCNEVEIISNLK 367
+ + F + IG G +G+VYK + G VA+KK+ ++++ +G + E+ ++ L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 368 HRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRK 427
H N+V L V+ +N+ YLV++++ F D S + PL P K
Sbjct: 62 HPNIVKL--LDVIHTENKL----YLVFEFLHQD------LKKFMDASALTGIPL--PLIK 107
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+ + + +GLA+ H + HRD+K N+L++ + ++ADFGLA+
Sbjct: 108 SYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE 164
Query: 488 VAGTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMCGRKAL 528
V T Y APE L + + D++S G + E M R+AL
Sbjct: 165 VV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAE-MVTRRAL 204
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 109/222 (49%), Gaps = 23/222 (10%)
Query: 311 ATDKFSQKNFIGRGGFGLVYKGILQ-DGTTVAVKKV-IESDFQG-DAEFCNEVEIISNLK 367
+ + F + IG G +G+VYK + G VA+KK+ ++++ +G + E+ ++ L
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 368 HRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRK 427
H N+V L V+ +N+ YLV++++ F D S + PL P K
Sbjct: 65 HPNIVKL--LDVIHTENKL----YLVFEFLHQD------LKKFMDASALTGIPL--PLIK 110
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+ + + +GLA+ H + HRD+K N+L++ + ++ADFGLA+
Sbjct: 111 SYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE 167
Query: 488 VAGTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMCGRKAL 528
V T Y APE L + + D++S G + E M R+AL
Sbjct: 168 VV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAE-MVTRRAL 207
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 112/222 (50%), Gaps = 23/222 (10%)
Query: 311 ATDKFSQKNFIGRGGFGLVYKGILQ-DGTTVAVKKV-IESDFQG-DAEFCNEVEIISNLK 367
+ + F + IG G +G+VYK + G VA+KK+ ++++ +G + E+ ++ L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 368 HRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRK 427
H N+V L V+ +N+ YLV++++ ++D F D S + PL P K
Sbjct: 62 HPNIVKL--LDVIHTENKL----YLVFEFL---SMD---LKKFMDASALTGIPL--PLIK 107
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+ + + +GLA+ H + HRD+K N+L++ + ++ADFGLA+
Sbjct: 108 SYLFQLLQGLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHE 164
Query: 488 VAGTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMCGRKAL 528
V T Y APE L + + D++S G + E M R+AL
Sbjct: 165 VV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAE-MVTRRAL 204
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 108/220 (49%), Gaps = 23/220 (10%)
Query: 313 DKFSQKNFIGRGGFGLVYKGILQ-DGTTVAVKKV-IESDFQG-DAEFCNEVEIISNLKHR 369
+ F + IG G +G+VYK + G VA+KK+ ++++ +G + E+ ++ L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 370 NLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNI 429
N+V L V+ +N+ YLV++++ F D S + PL P K+
Sbjct: 62 NIVKL--LDVIHTENKL----YLVFEFLHQD------LKKFMDASALTGIPL--PLIKSY 107
Query: 430 ILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVA 489
+ + +GLA+ H + HRD+K N+L++ + ++ADFGLA+ V
Sbjct: 108 LFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 164
Query: 490 GTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMCGRKAL 528
T Y APE L + + D++S G + E M R+AL
Sbjct: 165 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAE-MVTRRAL 202
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 109/222 (49%), Gaps = 23/222 (10%)
Query: 311 ATDKFSQKNFIGRGGFGLVYKGILQ-DGTTVAVKKV-IESDFQG-DAEFCNEVEIISNLK 367
+ + F + IG G +G+VYK + G VA+KK+ ++++ +G + E+ ++ L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 368 HRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRK 427
H N+V L V+ +N+ YLV++++ F D S + PL P K
Sbjct: 61 HPNIVKL--LDVIHTENKL----YLVFEFLHQD------LKKFMDASALTGIPL--PLIK 106
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+ + + +GLA+ H + HRD+K N+L++ + ++ADFGLA+
Sbjct: 107 SYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE 163
Query: 488 VAGTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMCGRKAL 528
V T Y APE L + + D++S G + E M R+AL
Sbjct: 164 VV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAE-MVTRRAL 203
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 109/222 (49%), Gaps = 23/222 (10%)
Query: 311 ATDKFSQKNFIGRGGFGLVYKGILQ-DGTTVAVKKV-IESDFQG-DAEFCNEVEIISNLK 367
+ + F + IG G +G+VYK + G VA+KK+ ++++ +G + E+ ++ L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 368 HRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRK 427
H N+V L V+ +N+ YLV++++ F D S + PL P K
Sbjct: 64 HPNIVKL--LDVIHTENKL----YLVFEFLHQD------LKKFMDASALTGIPL--PLIK 109
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+ + + +GLA+ H + HRD+K N+L++ + ++ADFGLA+
Sbjct: 110 SYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE 166
Query: 488 VAGTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMCGRKAL 528
V T Y APE L + + D++S G + E M R+AL
Sbjct: 167 VV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAE-MVTRRAL 206
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 109/222 (49%), Gaps = 23/222 (10%)
Query: 311 ATDKFSQKNFIGRGGFGLVYKGILQ-DGTTVAVKKV-IESDFQG-DAEFCNEVEIISNLK 367
+ + F + IG G +G+VYK + G VA+KK+ ++++ +G + E+ ++ L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 368 HRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRK 427
H N+V L V+ +N+ YLV++++ F D S + PL P K
Sbjct: 63 HPNIVKL--LDVIHTENKL----YLVFEFLHQD------LKKFMDASALTGIPL--PLIK 108
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+ + + +GLA+ H + HRD+K N+L++ + ++ADFGLA+
Sbjct: 109 SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE 165
Query: 488 VAGTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMCGRKAL 528
V T Y APE L + + D++S G + E M R+AL
Sbjct: 166 VV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAE-MVTRRAL 205
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 109/222 (49%), Gaps = 23/222 (10%)
Query: 311 ATDKFSQKNFIGRGGFGLVYKGILQ-DGTTVAVKKV-IESDFQG-DAEFCNEVEIISNLK 367
+ + F + IG G +G+VYK + G VA+KK+ ++++ +G + E+ ++ L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 368 HRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRK 427
H N+V L V+ +N+ YLV++++ F D S + PL P K
Sbjct: 62 HPNIVKL--LDVIHTENKL----YLVFEFLHQD------LKKFMDASALTGIPL--PLIK 107
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+ + + +GLA+ H + HRD+K N+L++ + ++ADFGLA+
Sbjct: 108 SYLFQLLQGLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHE 164
Query: 488 VAGTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMCGRKAL 528
V T Y APE L + + D++S G + E M R+AL
Sbjct: 165 VV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAE-MVTRRAL 204
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 109/222 (49%), Gaps = 23/222 (10%)
Query: 311 ATDKFSQKNFIGRGGFGLVYKGILQ-DGTTVAVKKV-IESDFQG-DAEFCNEVEIISNLK 367
+ + F + IG G +G+VYK + G VA+KK+ ++++ +G + E+ ++ L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 368 HRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRK 427
H N+V L V+ +N+ YLV++++ F D S + PL P K
Sbjct: 63 HPNIVKL--LDVIHTENKL----YLVFEFLHQD------LKKFMDASALTGIPL--PLIK 108
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+ + + +GLA+ H + HRD+K N+L++ + ++ADFGLA+
Sbjct: 109 SYLFQLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHE 165
Query: 488 VAGTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMCGRKAL 528
V T Y APE L + + D++S G + E M R+AL
Sbjct: 166 VV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAE-MVTRRAL 205
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 104/215 (48%), Gaps = 27/215 (12%)
Query: 315 FSQKNFIGRGGFGLVYKGILQDGTTV--AVKKVIESDFQGDAEFCNEVEIISNLKHRNLV 372
++ +N IGRG +G V K +Q GT + A KK+ + + F E+EI+ +L H N++
Sbjct: 11 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 69
Query: 373 PLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILD 432
L E ++ YLV + G + + + V KR I+ D
Sbjct: 70 RLYETF------EDNTDIYLVMELCTGGELFERV---------VHKRVFRESDAARIMKD 114
Query: 433 VAKGLAYLHYGVKPAIYHRDIKATNILL---DADMRARVADFGLAKQSREGQSHLTTRVA 489
V +AY H K + HRD+K N L D ++ DFGLA + + G+ + T+V
Sbjct: 115 VLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK-MMRTKV- 169
Query: 490 GTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
GT Y++P+ L G + D +S GV++ ++CG
Sbjct: 170 GTPYYVSPQ-VLEGLYGPECDEWSAGVMMYVLLCG 203
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 23/206 (11%)
Query: 321 IGRGGFGLV-YKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPLRGCCV 379
IG G G+V + G VAVKK+ Q NEV I+ + +H N+V + +
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 380 VDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLAY 439
V G E ++V +++ G + D + + + +A + L V + L+
Sbjct: 97 V------GDELWVVMEFLEGGALTDIVTHTRMNEEQIAA----------VCLAVLQALSV 140
Query: 440 LHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQ-SREGQSHLTTRVAGTHGYLAPE 498
LH + HRDIK+ +ILL D R +++DFG Q S+E + GT ++APE
Sbjct: 141 LHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR--KXLVGTPYWMAPE 195
Query: 499 YALYGQLTEKSDVYSFGVVILEIMCG 524
+ D++S G++++E++ G
Sbjct: 196 LISRLPYGPEVDIWSLGIMVIEMVDG 221
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 108/220 (49%), Gaps = 23/220 (10%)
Query: 313 DKFSQKNFIGRGGFGLVYKGILQ-DGTTVAVKKV-IESDFQG-DAEFCNEVEIISNLKHR 369
+ F + IG G +G+VYK + G VA+ K+ ++++ +G + E+ ++ L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 370 NLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNI 429
N+V L V+ +N+ YLV++++ F D S + PL P K+
Sbjct: 63 NIVKL--LDVIHTENKL----YLVFEFLHQD------LKKFMDASALTGIPL--PLIKSY 108
Query: 430 ILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVA 489
+ + +GLA+ H + HRD+K N+L++ + ++ADFGLA+ T V
Sbjct: 109 LFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 165
Query: 490 GTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMCGRKAL 528
T Y APE L + + D++S G + E M R+AL
Sbjct: 166 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAE-MVTRRAL 203
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 108/220 (49%), Gaps = 23/220 (10%)
Query: 313 DKFSQKNFIGRGGFGLVYKGILQ-DGTTVAVKKV-IESDFQG-DAEFCNEVEIISNLKHR 369
+ F + IG G +G+VYK + G VA+ K+ ++++ +G + E+ ++ L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 370 NLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNI 429
N+V L V+ +N+ YLV++++ F D S + PL P K+
Sbjct: 62 NIVKL--LDVIHTENKL----YLVFEFLHQD------LKKFMDASALTGIPL--PLIKSY 107
Query: 430 ILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVA 489
+ + +GLA+ H + HRD+K N+L++ + ++ADFGLA+ T V
Sbjct: 108 LFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 164
Query: 490 GTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMCGRKAL 528
T Y APE L + + D++S G + E M R+AL
Sbjct: 165 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAE-MVTRRAL 202
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 97/211 (45%), Gaps = 27/211 (12%)
Query: 320 FIGRGGFGLVYK---GILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPLRG 376
+G+G FG V K I Q V V + + + EVE++ L H N++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 377 CCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKG 436
E S Y+V + G + D + + ++ + II V G
Sbjct: 89 IL------EDSSSFYIVGELYTGGELFDEI---------IKRKRFSEHDAARIIKQVFSG 133
Query: 437 LAYLHYGVKPAIYHRDIKATNILLDA---DMRARVADFGLAKQSREGQSHLTTRVAGTHG 493
+ Y+H K I HRD+K NILL++ D ++ DFGL+ ++ + + R+ GT
Sbjct: 134 ITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRI-GTAY 188
Query: 494 YLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
Y+APE L G EK DV+S GV++ ++ G
Sbjct: 189 YIAPE-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 104/222 (46%), Gaps = 32/222 (14%)
Query: 312 TDKFSQKNFIGRGGFGLVYKGILQD---GTTVAVKKVIESDFQGDAE---FCNEVEIISN 365
+D++ + +G+G FG V + +D G AVK + + + + EV+++
Sbjct: 31 SDRYKGQRVLGKGSFGEVI--LCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQ 88
Query: 366 LKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQ 425
L H N++ L E YLV + G + D + ++++ +
Sbjct: 89 LDHPNIMKLYEFF------EDKGYFYLVGEVYTGGELFDEI---------ISRKRFSEVD 133
Query: 426 RKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDA---DMRARVADFGLAKQSREGQS 482
II V G+ Y+H K I HRD+K N+LL++ D R+ DFGL+ E
Sbjct: 134 AARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-EASK 189
Query: 483 HLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
+ ++ GT Y+APE L+G EK DV+S GV++ ++ G
Sbjct: 190 KMKDKI-GTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 229
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 104/215 (48%), Gaps = 27/215 (12%)
Query: 315 FSQKNFIGRGGFGLVYKGILQDGTTV--AVKKVIESDFQGDAEFCNEVEIISNLKHRNLV 372
++ +N IGRG +G V K +Q GT + A KK+ + + F E+EI+ +L H N++
Sbjct: 28 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 86
Query: 373 PLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILD 432
L E ++ YLV + G + + + V KR I+ D
Sbjct: 87 RLYETF------EDNTDIYLVMELCTGGELFERV---------VHKRVFRESDAARIMKD 131
Query: 433 VAKGLAYLHYGVKPAIYHRDIKATNILL---DADMRARVADFGLAKQSREGQSHLTTRVA 489
V +AY H K + HRD+K N L D ++ DFGLA + + G+ + T+V
Sbjct: 132 VLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK-MMRTKV- 186
Query: 490 GTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
GT Y++P+ L G + D +S GV++ ++CG
Sbjct: 187 GTPYYVSPQ-VLEGLYGPECDEWSAGVMMYVLLCG 220
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 108/220 (49%), Gaps = 23/220 (10%)
Query: 313 DKFSQKNFIGRGGFGLVYKGILQ-DGTTVAVKKV-IESDFQG-DAEFCNEVEIISNLKHR 369
+ F + IG G +G+VYK + G VA+KK+ ++++ +G + E+ ++ L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 370 NLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNI 429
N+V L V+ +N+ YLV++++ F D S + PL P K+
Sbjct: 62 NIVKL--LDVIHTENKL----YLVFEFLHQD------LKKFMDASALTGIPL--PLIKSY 107
Query: 430 ILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVA 489
+ + +GLA+ H + HRD+K N+L++ + ++ADFGLA+ V
Sbjct: 108 LFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 164
Query: 490 GTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMCGRKAL 528
T Y APE L + + D++S G + E M R+AL
Sbjct: 165 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAE-MVTRRAL 202
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 104/222 (46%), Gaps = 32/222 (14%)
Query: 312 TDKFSQKNFIGRGGFGLVYKGILQD---GTTVAVKKVIESDFQGDAE---FCNEVEIISN 365
+D++ + +G+G FG V + +D G AVK + + + + EV+++
Sbjct: 25 SDRYKGQRVLGKGSFGEVI--LCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQ 82
Query: 366 LKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQ 425
L H N++ L E YLV + G + D + ++++ +
Sbjct: 83 LDHPNIMKLYEFF------EDKGYFYLVGEVYTGGELFDEI---------ISRKRFSEVD 127
Query: 426 RKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDA---DMRARVADFGLAKQSREGQS 482
II V G+ Y+H K I HRD+K N+LL++ D R+ DFGL+ E
Sbjct: 128 AARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-EASK 183
Query: 483 HLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
+ ++ GT Y+APE L+G EK DV+S GV++ ++ G
Sbjct: 184 KMKDKI-GTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 104/228 (45%), Gaps = 17/228 (7%)
Query: 304 KIQDLERATDKFSQKNFIGRGGFGLVYKGIL--QDGTTVAVK-KVIESDFQGDA---EFC 357
K++D+ +F+ +G+G FG V + L +DG+ V V K++++D + EF
Sbjct: 14 KLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFL 73
Query: 358 NEVEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVA 417
E + H ++ L G + R ++ +M +G++ L S +
Sbjct: 74 REAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLL-----ASRIG 128
Query: 418 KRPLTWPQRK--NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAK 475
+ P P + ++D+A G+ YL HRD+ A N +L DM VADFGL++
Sbjct: 129 ENPFNLPLQTLVRFMVDIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVCVADFGLSR 185
Query: 476 QSREGQSHLTTRVAGTH-GYLAPEYALYGQLTEKSDVYSFGVVILEIM 522
+ G + + +LA E T SDV++FGV + EIM
Sbjct: 186 KIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIM 233
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 110/225 (48%), Gaps = 28/225 (12%)
Query: 314 KFSQKNFIGRGGFGLVYKGI-LQDGTTV----AVKKVIESDF-QGDAEFCNEVEIISNLK 367
+F + +G G FG VYKG+ + +G V A+K++ E+ + + E +E +++++
Sbjct: 13 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 72
Query: 368 HRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRK 427
+ ++ L G C+ S L+ MP G + D++ D G ++ L W
Sbjct: 73 NPHVCRLLGICLT-------STVQLITQLMPFGCLLDYVR-EHKDNIG-SQYLLNW---- 119
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAK--QSREGQSHLT 485
+ +A+G+ YL + HRD+ A N+L+ ++ DFGLAK + E + H
Sbjct: 120 --CVQIAEGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 174
Query: 486 TRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMC-GRKALD 529
++A E L+ T +SDV+S+GV + E+M G K D
Sbjct: 175 GGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 218
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 23/206 (11%)
Query: 321 IGRGGFGLV-YKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPLRGCCV 379
IG G G+V + G VAVKK+ Q NEV I+ + +H N+V + +
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 380 VDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLAY 439
V G E ++V +++ G + D + + + +A + L V + L+
Sbjct: 88 V------GDELWVVMEFLEGGALTDIVTHTRMNEEQIAA----------VCLAVLQALSV 131
Query: 440 LHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQ-SREGQSHLTTRVAGTHGYLAPE 498
LH + HRDIK+ +ILL D R +++DFG Q S+E + GT ++APE
Sbjct: 132 LHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR--KXLVGTPYWMAPE 186
Query: 499 YALYGQLTEKSDVYSFGVVILEIMCG 524
+ D++S G++++E++ G
Sbjct: 187 LISRLPYGPEVDIWSLGIMVIEMVDG 212
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 103/219 (47%), Gaps = 36/219 (16%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISN--LKHRNLVPLRGCC 378
IG+G +G V+ G + G VAVK ++ +A + E EI ++H N++ G
Sbjct: 45 IGKGRYGEVWMGKWR-GEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENIL---GFI 97
Query: 379 VVDGDNERG-SERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGL 437
D ++ YL+ DY NG++ D+L + D + K + GL
Sbjct: 98 AADIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSMLK----------LAYSSVSGL 147
Query: 438 AYLHYGV-----KPAIYHRDIKATNILLDADMRARVADFGLAKQ----SREGQSHLTTRV 488
+LH + KPAI HRD+K+ NIL+ + +AD GLA + + E TRV
Sbjct: 148 CHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRV 207
Query: 489 AGTHGYLAPEY------ALYGQLTEKSDVYSFGVVILEI 521
GT Y+ PE + Q +D+YSFG+++ E+
Sbjct: 208 -GTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 99/218 (45%), Gaps = 29/218 (13%)
Query: 321 IGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQG---DAEFCNEVEIISNLKHRNLVPLRG 376
+G+G FG VY Q +A+K + ++ + + + EVEI S+L+H N++ L G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 377 CCVVDGDNERGSERYLVYDYMPNGNVDDHL--FPSFNDGSGVAKRPLTWPQRKNIILDVA 434
+ YL+ +Y P G V L F++ +R T+ I ++A
Sbjct: 80 YF------HDATRVYLILEYAPLGTVYRELQKLSRFDE-----QRTATY------ITELA 122
Query: 435 KGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGY 494
L+Y H + HRDIK N+LL ++ ++ADFG S S + GT Y
Sbjct: 123 NALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGW---SVHAPSSRRDTLCGTLDY 176
Query: 495 LAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLST 532
L PE EK D++S GV+ E + G + T
Sbjct: 177 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHT 214
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 108/220 (49%), Gaps = 23/220 (10%)
Query: 313 DKFSQKNFIGRGGFGLVYKGILQ-DGTTVAVKKV-IESDFQG-DAEFCNEVEIISNLKHR 369
+ F + IG G +G+VYK + G VA+KK+ ++++ +G + E+ ++ L H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 370 NLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNI 429
N+V L V+ +N+ YLV++++ F D S + PL P K+
Sbjct: 64 NIVKL--LDVIHTENKL----YLVFEFLHQD------LKKFMDASALTGIPL--PLIKSY 109
Query: 430 ILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVA 489
+ + +GLA+ H + HRD+K N+L++ + ++ADFGLA+ V
Sbjct: 110 LFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 166
Query: 490 GTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMCGRKAL 528
T Y APE L + + D++S G + E M R+AL
Sbjct: 167 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAE-MVTRRAL 204
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 23/206 (11%)
Query: 321 IGRGGFGLV-YKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPLRGCCV 379
IG G G+V + G VAVKK+ Q NEV I+ + +H N+V + +
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 380 VDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLAY 439
V G E ++V +++ G + D + + + +A + L V + L+
Sbjct: 99 V------GDELWVVMEFLEGGALTDIVTHTRMNEEQIAA----------VCLAVLQALSV 142
Query: 440 LHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQ-SREGQSHLTTRVAGTHGYLAPE 498
LH + HRDIK+ +ILL D R +++DFG Q S+E + GT ++APE
Sbjct: 143 LHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR--KXLVGTPYWMAPE 197
Query: 499 YALYGQLTEKSDVYSFGVVILEIMCG 524
+ D++S G++++E++ G
Sbjct: 198 LISRLPYGPEVDIWSLGIMVIEMVDG 223
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 23/206 (11%)
Query: 321 IGRGGFGLV-YKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPLRGCCV 379
IG G G+V + G VAVKK+ Q NEV I+ + +H N+V + +
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 380 VDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLAY 439
V G E ++V +++ G + D + + + +A + L V + L+
Sbjct: 219 V------GDELWVVMEFLEGGALTDIVTHTRMNEEQIAA----------VCLAVLQALSV 262
Query: 440 LHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQ-SREGQSHLTTRVAGTHGYLAPE 498
LH + HRDIK+ +ILL D R +++DFG Q S+E + GT ++APE
Sbjct: 263 LHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR--KXLVGTPYWMAPE 317
Query: 499 YALYGQLTEKSDVYSFGVVILEIMCG 524
+ D++S G++++E++ G
Sbjct: 318 LISRLPYGPEVDIWSLGIMVIEMVDG 343
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 23/206 (11%)
Query: 321 IGRGGFGLV-YKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPLRGCCV 379
IG G G+V + G VAVKK+ Q NEV I+ + +H N+V + +
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 380 VDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLAY 439
V G E ++V +++ G + D + + + +A + L V + L+
Sbjct: 92 V------GDELWVVMEFLEGGALTDIVTHTRMNEEQIAA----------VCLAVLQALSV 135
Query: 440 LHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQ-SREGQSHLTTRVAGTHGYLAPE 498
LH + HRDIK+ +ILL D R +++DFG Q S+E + GT ++APE
Sbjct: 136 LHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR--KXLVGTPYWMAPE 190
Query: 499 YALYGQLTEKSDVYSFGVVILEIMCG 524
+ D++S G++++E++ G
Sbjct: 191 LISRLPYGPEVDIWSLGIMVIEMVDG 216
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 97/210 (46%), Gaps = 27/210 (12%)
Query: 321 IGRGGFGLVYK---GILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPLRGC 377
+G+G FG V K I Q V V + + + EVE++ L H N++ L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 378 CVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGL 437
E S Y+V + G + D + + ++ + II V G+
Sbjct: 90 L------EDSSSFYIVGELYTGGELFDEI---------IKRKRFSEHDAARIIKQVFSGI 134
Query: 438 AYLHYGVKPAIYHRDIKATNILLDA---DMRARVADFGLAKQSREGQSHLTTRVAGTHGY 494
Y+H K I HRD+K NILL++ D ++ DFGL+ ++ + + R+ GT Y
Sbjct: 135 TYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRI-GTAYY 189
Query: 495 LAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
+APE L G EK DV+S GV++ ++ G
Sbjct: 190 IAPE-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 104/222 (46%), Gaps = 32/222 (14%)
Query: 312 TDKFSQKNFIGRGGFGLVYKGILQD---GTTVAVKKVIESDFQGDAE---FCNEVEIISN 365
+D++ + +G+G FG V + +D G AVK + + + + EV+++
Sbjct: 48 SDRYKGQRVLGKGSFGEVI--LCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQ 105
Query: 366 LKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQ 425
L H N++ L E YLV + G + D + ++++ +
Sbjct: 106 LDHPNIMKLYEFF------EDKGYFYLVGEVYTGGELFDEI---------ISRKRFSEVD 150
Query: 426 RKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDA---DMRARVADFGLAKQSREGQS 482
II V G+ Y+H K I HRD+K N+LL++ D R+ DFGL+ E
Sbjct: 151 AARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-EASK 206
Query: 483 HLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
+ ++ GT Y+APE L+G EK DV+S GV++ ++ G
Sbjct: 207 KMKDKI-GTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 246
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 97/210 (46%), Gaps = 27/210 (12%)
Query: 321 IGRGGFGLVYK---GILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPLRGC 377
+G+G FG V K I Q V V + + + EVE++ L H N++ L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 378 CVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGL 437
E S Y+V + G + D + + ++ + II V G+
Sbjct: 90 L------EDSSSFYIVGELYTGGELFDEI---------IKRKRFSEHDAARIIKQVFSGI 134
Query: 438 AYLHYGVKPAIYHRDIKATNILLDA---DMRARVADFGLAKQSREGQSHLTTRVAGTHGY 494
Y+H K I HRD+K NILL++ D ++ DFGL+ ++ + + R+ GT Y
Sbjct: 135 TYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRI-GTAYY 189
Query: 495 LAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
+APE L G EK DV+S GV++ ++ G
Sbjct: 190 IAPE-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 26/216 (12%)
Query: 315 FSQKNFIGRGGFGLVYKGILQ----DGTTVAVK--KVIESDFQGDAEFCNEVEIISNLKH 368
S +G G FG V G L+ +VA+K KV ++ Q +F E I+ H
Sbjct: 18 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQFDH 76
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKN 428
N++ L G + +V + M NG++D F +D T Q
Sbjct: 77 PNIIRLEGVVT------KSKPVMIVTEXMENGSLDS--FLRKHDAQ------FTVIQLVG 122
Query: 429 IILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREG-QSHLTTR 487
++ +A G+ YL HRD+ A NIL+++++ +V+DFGL++ + ++ TTR
Sbjct: 123 MLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 179
Query: 488 VAGTH-GYLAPEYALYGQLTEKSDVYSFGVVILEIM 522
+ +PE Y + T SDV+S+G+V+ E+M
Sbjct: 180 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 215
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 104/222 (46%), Gaps = 32/222 (14%)
Query: 312 TDKFSQKNFIGRGGFGLVYKGILQD---GTTVAVKKVIESDFQGDAE---FCNEVEIISN 365
+D++ + +G+G FG V + +D G AVK + + + + EV+++
Sbjct: 49 SDRYKGQRVLGKGSFGEVI--LCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQ 106
Query: 366 LKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQ 425
L H N++ L E YLV + G + D + ++++ +
Sbjct: 107 LDHPNIMKLYEFF------EDKGYFYLVGEVYTGGELFDEI---------ISRKRFSEVD 151
Query: 426 RKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDA---DMRARVADFGLAKQSREGQS 482
II V G+ Y+H K I HRD+K N+LL++ D R+ DFGL+ E
Sbjct: 152 AARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-EASK 207
Query: 483 HLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
+ ++ GT Y+APE L+G EK DV+S GV++ ++ G
Sbjct: 208 KMKDKI-GTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 247
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 90/213 (42%), Gaps = 22/213 (10%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGD--AEFCNEVEIISNLKHRNLVPLRGCC 378
+G G +G V + + K+++ D E+ I L H N+V G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG-- 71
Query: 379 VVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLA 438
G+ +YL +Y G + D + P + P + + G+
Sbjct: 72 ----HRREGNIQYLFLEYCSGGELFDRIEPDIG---------MPEPDAQRFFHQLMAGVV 118
Query: 439 YLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSR-EGQSHLTTRVAGTHGYLAP 497
YLH G+ I HRDIK N+LLD +++DFGLA R + L ++ GT Y+AP
Sbjct: 119 YLH-GI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 498 EYALYGQL-TEKSDVYSFGVVILEIMCGRKALD 529
E + E DV+S G+V+ ++ G D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 109/225 (48%), Gaps = 28/225 (12%)
Query: 314 KFSQKNFIGRGGFGLVYKGI-LQDGTTV----AVKKVIESDF-QGDAEFCNEVEIISNLK 367
+F + +G G FG VYKG+ + +G V A+K++ E+ + + E +E +++++
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 368 HRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRK 427
+ ++ L G C+ S L+ MP G + D++ D G ++ L W
Sbjct: 80 NPHVCRLLGICLT-------STVQLIMQLMPFGCLLDYVR-EHKDNIG-SQYLLNW---- 126
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAK--QSREGQSHLT 485
+ +AKG+ YL + HRD+ A N+L+ ++ DFG AK + E + H
Sbjct: 127 --CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE 181
Query: 486 TRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMC-GRKALD 529
++A E L+ T +SDV+S+GV + E+M G K D
Sbjct: 182 GGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 109/225 (48%), Gaps = 28/225 (12%)
Query: 314 KFSQKNFIGRGGFGLVYKGI-LQDGTTV----AVKKVIESDF-QGDAEFCNEVEIISNLK 367
+F + + G FG VYKG+ + +G V A+K++ E+ + + E +E +++++
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 368 HRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRK 427
+ ++ L G C+ S L+ MP G + D++ D G ++ L W
Sbjct: 83 NPHVCRLLGICLT-------STVQLIMQLMPFGCLLDYVR-EHKDNIG-SQYLLNW---- 129
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAK--QSREGQSHLT 485
+ +AKG+ YL + HRD+ A N+L+ ++ DFGLAK + E + H
Sbjct: 130 --CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 184
Query: 486 TRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMC-GRKALD 529
++A E L+ T +SDV+S+GV + E+M G K D
Sbjct: 185 GGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 109/225 (48%), Gaps = 28/225 (12%)
Query: 314 KFSQKNFIGRGGFGLVYKGI-LQDGTTV----AVKKVIESDF-QGDAEFCNEVEIISNLK 367
+F + +G G FG VYKG+ + +G V A+K++ E+ + + E +E +++++
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 368 HRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRK 427
+ ++ L G C+ S L+ MP G + D++ D G ++ L W
Sbjct: 78 NPHVCRLLGICLT-------STVQLIMQLMPFGCLLDYVR-EHKDNIG-SQYLLNW---- 124
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAK--QSREGQSHLT 485
+ +AKG+ YL + HRD+ A N+L+ ++ DFG AK + E + H
Sbjct: 125 --CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE 179
Query: 486 TRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMC-GRKALD 529
++A E L+ T +SDV+S+GV + E+M G K D
Sbjct: 180 GGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 90/213 (42%), Gaps = 22/213 (10%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGD--AEFCNEVEIISNLKHRNLVPLRGCC 378
+G G +G V + + K+++ D E+ I L H N+V G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG-- 71
Query: 379 VVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLA 438
G+ +YL +Y G + D + P + P + + G+
Sbjct: 72 ----HRREGNIQYLFLEYCSGGELFDRIEPDIG---------MPEPDAQRFFHQLMAGVV 118
Query: 439 YLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSR-EGQSHLTTRVAGTHGYLAP 497
YLH G+ I HRDIK N+LLD +++DFGLA R + L ++ GT Y+AP
Sbjct: 119 YLH-GI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 498 EYALYGQL-TEKSDVYSFGVVILEIMCGRKALD 529
E + E DV+S G+V+ ++ G D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 90/213 (42%), Gaps = 22/213 (10%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGD--AEFCNEVEIISNLKHRNLVPLRGCC 378
+G G +G V + + K+++ D E+ I L H N+V G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG-- 72
Query: 379 VVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLA 438
G+ +YL +Y G + D + P + P + + G+
Sbjct: 73 ----HRREGNIQYLFLEYCSGGELFDRIEPDIG---------MPEPDAQRFFHQLMAGVV 119
Query: 439 YLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSR-EGQSHLTTRVAGTHGYLAP 497
YLH G+ I HRDIK N+LLD +++DFGLA R + L ++ GT Y+AP
Sbjct: 120 YLH-GI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 176
Query: 498 EYALYGQL-TEKSDVYSFGVVILEIMCGRKALD 529
E + E DV+S G+V+ ++ G D
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 109/225 (48%), Gaps = 28/225 (12%)
Query: 314 KFSQKNFIGRGGFGLVYKGI-LQDGTTV----AVKKVIESDF-QGDAEFCNEVEIISNLK 367
+F + +G G FG VYKG+ + +G V A+K++ E+ + + E +E +++++
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 368 HRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRK 427
+ ++ L G C+ S L+ MP G + D++ D G ++ L W
Sbjct: 78 NPHVCRLLGICLT-------STVQLIMQLMPFGCLLDYVR-EHKDNIG-SQYLLNW---- 124
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAK--QSREGQSHLT 485
+ +AKG+ YL + HRD+ A N+L+ ++ DFG AK + E + H
Sbjct: 125 --CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE 179
Query: 486 TRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMC-GRKALD 529
++A E L+ T +SDV+S+GV + E+M G K D
Sbjct: 180 GGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 109/225 (48%), Gaps = 28/225 (12%)
Query: 314 KFSQKNFIGRGGFGLVYKGI-LQDGTTV----AVKKVIESDF-QGDAEFCNEVEIISNLK 367
+F + + G FG VYKG+ + +G V A+K++ E+ + + E +E +++++
Sbjct: 16 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 368 HRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRK 427
+ ++ L G C+ S L+ MP G + D++ D G ++ L W
Sbjct: 76 NPHVCRLLGICLT-------STVQLITQLMPFGCLLDYVR-EHKDNIG-SQYLLNW---- 122
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAK--QSREGQSHLT 485
+ +AKG+ YL + HRD+ A N+L+ ++ DFGLAK + E + H
Sbjct: 123 --CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 177
Query: 486 TRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMC-GRKALD 529
++A E L+ T +SDV+S+GV + E+M G K D
Sbjct: 178 GGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 26/216 (12%)
Query: 315 FSQKNFIGRGGFGLVYKGILQ----DGTTVAVK--KVIESDFQGDAEFCNEVEIISNLKH 368
S +G G FG V G L+ +VA+K KV ++ Q +F E I+ H
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQFDH 105
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKN 428
N++ L G + +V + M NG++D F +D T Q
Sbjct: 106 PNIIRLEGVVT------KSKPVMIVTEXMENGSLDS--FLRKHDAQ------FTVIQLVG 151
Query: 429 IILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQ-SREGQSHLTTR 487
++ +A G+ YL HRD+ A NIL+++++ +V+DFGL++ + ++ TTR
Sbjct: 152 MLRGIASGMKYLS---DMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
Query: 488 VAGTH-GYLAPEYALYGQLTEKSDVYSFGVVILEIM 522
+ +PE Y + T SDV+S+G+V+ E+M
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 115/241 (47%), Gaps = 42/241 (17%)
Query: 304 KIQDLERATDKFSQKNFIGRGGFGLVYKGIL-----QDGTTVAVKKVIESDFQGD--AEF 356
K++++ + +F ++ +G FG VYKG L + T K ++ +G EF
Sbjct: 19 KLKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEF 76
Query: 357 CNEVEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLF---PSFNDG 413
+E + + L+H N+V L G VV D +++ Y +G++ + L P + G
Sbjct: 77 RHEAMLRARLQHPNVVCLLG--VVTKDQPLS----MIFSYCSHGDLHEFLVMRSPHSDVG 130
Query: 414 SG----VAKRPLTWPQRKNIILDVAKGLAYL--HYGVKPAIYHRDIKATNILLDADMRAR 467
S K L P +++ +A G+ YL H+ + H+D+ N+L+ + +
Sbjct: 131 STDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH-----VVHKDLATRNVLVYDKLNVK 185
Query: 468 VADFGLAKQSRE-------GQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILE 520
++D GL ++ G S L R ++APE +YG+ + SD++S+GVV+ E
Sbjct: 186 ISDLGLFREVYAADYYKLLGNSLLPIR------WMAPEAIMYGKFSIDSDIWSYGVVLWE 239
Query: 521 I 521
+
Sbjct: 240 V 240
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 109/225 (48%), Gaps = 28/225 (12%)
Query: 314 KFSQKNFIGRGGFGLVYKGI-LQDGTTV----AVKKVIESDF-QGDAEFCNEVEIISNLK 367
+F + +G G FG VYKG+ + +G V A+K++ E+ + + E +E +++++
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 368 HRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRK 427
+ ++ L G C+ S L+ MP G + D++ D G ++ L W
Sbjct: 78 NPHVCRLLGICLT-------STVQLITQLMPFGCLLDYVR-EHKDNIG-SQYLLNW---- 124
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAK--QSREGQSHLT 485
+ +AKG+ YL + HRD+ A N+L+ ++ DFG AK + E + H
Sbjct: 125 --CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE 179
Query: 486 TRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMC-GRKALD 529
++A E L+ T +SDV+S+GV + E+M G K D
Sbjct: 180 GGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 97/205 (47%), Gaps = 21/205 (10%)
Query: 321 IGRGGFGLV-YKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPLRGCCV 379
IG G G+V + G VAVKK+ Q NEV I+ + +H N+V + +
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 380 VDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLAY 439
V G E ++V +++ G + D + + + +A + L V + L+
Sbjct: 142 V------GDELWVVMEFLEGGALTDIVTHTRMNEEQIAA----------VCLAVLQALSV 185
Query: 440 LHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGYLAPEY 499
LH + HRDIK+ +ILL D R +++DFG Q + + + GT ++APE
Sbjct: 186 LHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK-EVPRRKXLVGTPYWMAPEL 241
Query: 500 ALYGQLTEKSDVYSFGVVILEIMCG 524
+ D++S G++++E++ G
Sbjct: 242 ISRLPYGPEVDIWSLGIMVIEMVDG 266
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 109/225 (48%), Gaps = 28/225 (12%)
Query: 314 KFSQKNFIGRGGFGLVYKGI-LQDGTTV----AVKKVIESDF-QGDAEFCNEVEIISNLK 367
+F + +G G FG VYKG+ + +G V A+K++ E+ + + E +E +++++
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 368 HRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRK 427
+ ++ L G C+ S L+ MP G + D++ D G ++ L W
Sbjct: 83 NPHVCRLLGICLT-------STVQLITQLMPFGCLLDYVR-EHKDNIG-SQYLLNW---- 129
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAK--QSREGQSHLT 485
+ +AKG+ YL + HRD+ A N+L+ ++ DFG AK + E + H
Sbjct: 130 --CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE 184
Query: 486 TRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMC-GRKALD 529
++A E L+ T +SDV+S+GV + E+M G K D
Sbjct: 185 GGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 102/229 (44%), Gaps = 34/229 (14%)
Query: 315 FSQKNFIGRGGFGLVYKGILQ-DGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVP 373
F + IG GGFG V+K + DG T +++V ++ + + EV+ ++ L H N+V
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAE----REVKALAKLDHVNIVH 69
Query: 374 LRGCCV-VDGDNERGSERYLVYDYMPNGNVDDH------LF--PSFNDGSGVAKRPLTWP 424
GC D D E + DY P + + LF F D + + W
Sbjct: 70 YNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQ----WI 125
Query: 425 QRK-----------NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGL 473
+++ + + KG+ Y+H + HRD+K +NI L + ++ DFGL
Sbjct: 126 EKRRGEKLDKVLALELFEQITKGVDYIH---SKKLIHRDLKPSNIFLVDTKQVKIGDFGL 182
Query: 474 AKQSREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIM 522
+ TR GT Y++PE ++ D+Y+ G+++ E++
Sbjct: 183 VTSLKNDGKR--TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 96/215 (44%), Gaps = 28/215 (13%)
Query: 321 IGRGGFGLVY--KGILQDGTTVAVKKVIESDFQGDA--EFCNEVEIISNLKHRNLVPLRG 376
IG+G F V + IL G VAVK + ++ + + EV I+ L H N+V L
Sbjct: 15 IGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 73
Query: 377 CCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKG 436
E YLV +Y G V D+L W + K +
Sbjct: 74 VI------ETEKTLYLVMEYASGGEVFDYLVAH------------GWMKEKEARAKFRQI 115
Query: 437 LAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGYLA 496
++ + Y + I HRD+KA N+LLDADM ++ADFG + + G T G+ Y A
Sbjct: 116 VSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT--FCGSPPYAA 173
Query: 497 PEYALYGQLTE--KSDVYSFGVVILEIMCGRKALD 529
PE G+ + + DV+S GV++ ++ G D
Sbjct: 174 PE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 207
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 109/225 (48%), Gaps = 28/225 (12%)
Query: 314 KFSQKNFIGRGGFGLVYKGI-LQDGTTV----AVKKVIESDF-QGDAEFCNEVEIISNLK 367
+F + + G FG VYKG+ + +G V A+K++ E+ + + E +E +++++
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 368 HRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRK 427
+ ++ L G C+ S L+ MP G + D++ D G ++ L W
Sbjct: 83 NPHVCRLLGICLT-------STVQLITQLMPFGCLLDYVR-EHKDNIG-SQYLLNW---- 129
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAK--QSREGQSHLT 485
+ +AKG+ YL + HRD+ A N+L+ ++ DFGLAK + E + H
Sbjct: 130 --CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 184
Query: 486 TRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMC-GRKALD 529
++A E L+ T +SDV+S+GV + E+M G K D
Sbjct: 185 GGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 109/225 (48%), Gaps = 28/225 (12%)
Query: 314 KFSQKNFIGRGGFGLVYKGI-LQDGTTV----AVKKVIESDF-QGDAEFCNEVEIISNLK 367
+F + +G G FG VYKG+ + +G V A+K++ E+ + + E +E +++++
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 368 HRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRK 427
+ ++ L G C+ S L+ MP G + D++ D G ++ L W
Sbjct: 76 NPHVCRLLGICLT-------STVQLITQLMPFGCLLDYVR-EHKDNIG-SQYLLNW---- 122
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAK--QSREGQSHLT 485
+ +AKG+ YL + HRD+ A N+L+ ++ DFG AK + E + H
Sbjct: 123 --CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE 177
Query: 486 TRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMC-GRKALD 529
++A E L+ T +SDV+S+GV + E+M G K D
Sbjct: 178 GGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 113/241 (46%), Gaps = 42/241 (17%)
Query: 304 KIQDLERATDKFSQKNFIGRGGFGLVYKGIL-----QDGTTVAVKKVIESDFQGD--AEF 356
K++++ + +F ++ +G FG VYKG L + T K ++ +G EF
Sbjct: 2 KLKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEF 59
Query: 357 CNEVEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLF---PSFNDG 413
+E + + L+H N+V L G D +++ Y +G++ + L P + G
Sbjct: 60 RHEAMLRARLQHPNVVCLLGVVTKD------QPLSMIFSYCSHGDLHEFLVMRSPHSDVG 113
Query: 414 SG----VAKRPLTWPQRKNIILDVAKGLAYL--HYGVKPAIYHRDIKATNILLDADMRAR 467
S K L P +++ +A G+ YL H+ + H+D+ N+L+ + +
Sbjct: 114 STDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH-----VVHKDLATRNVLVYDKLNVK 168
Query: 468 VADFGLAKQSRE-------GQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILE 520
++D GL ++ G S L R ++APE +YG+ + SD++S+GVV+ E
Sbjct: 169 ISDLGLFREVYAADYYKLLGNSLLPIR------WMAPEAIMYGKFSIDSDIWSYGVVLWE 222
Query: 521 I 521
+
Sbjct: 223 V 223
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 91/213 (42%), Gaps = 22/213 (10%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGD--AEFCNEVEIISNLKHRNLVPLRGCC 378
+G G +G V + + K+++ D E+ I + L H N+V G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYG-- 72
Query: 379 VVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLA 438
G+ +YL +Y G + D + P + P + + G+
Sbjct: 73 ----HRREGNIQYLFLEYCSGGELFDRIEPDIG---------MPEPDAQRFFHQLMAGVV 119
Query: 439 YLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSR-EGQSHLTTRVAGTHGYLAP 497
YLH G+ I HRDIK N+LLD +++DFGLA R + L ++ GT Y+AP
Sbjct: 120 YLH-GI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 498 EYALYGQL-TEKSDVYSFGVVILEIMCGRKALD 529
E + E DV+S G+V+ ++ G D
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 93/209 (44%), Gaps = 27/209 (12%)
Query: 321 IGRGGFGLVY--KGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPLRGCC 378
+G G F V+ K L G A+K + +S D+ NE+ ++ +KH N+V L
Sbjct: 17 LGSGAFSEVFLVKQRLT-GKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIY 75
Query: 379 VVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLA 438
E + YLV + G + D + GV T +I V +
Sbjct: 76 ------ESTTHYYLVMQLVSGGELFDRILER-----GV----YTEKDASLVIQQVLSAVK 120
Query: 439 YLHYGVKPAIYHRDIKATNILL---DADMRARVADFGLAKQSREGQSHLTTRVAGTHGYL 495
YLH + I HRD+K N+L + + + + DFGL+K + G + + GT GY+
Sbjct: 121 YLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG---IMSTACGTPGYV 174
Query: 496 APEYALYGQLTEKSDVYSFGVVILEIMCG 524
APE ++ D +S GV+ ++CG
Sbjct: 175 APEVLAQKPYSKAVDCWSIGVITYILLCG 203
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 97/215 (45%), Gaps = 28/215 (13%)
Query: 321 IGRGGFGLVY--KGILQDGTTVAVKKVIESDFQGDA--EFCNEVEIISNLKHRNLVPLRG 376
IG+G F V + IL G VAVK + ++ + + EV I+ L H N+V L
Sbjct: 22 IGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 377 CCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKG 436
E YLV +Y G V D+L VA + + + +
Sbjct: 81 VI------ETEKTLYLVMEYASGGEVFDYL---------VAHGRMKEKEARAKFRQIVSA 125
Query: 437 LAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGYLA 496
+ Y H + I HRD+KA N+LLDADM ++ADFG + + G T G+ Y A
Sbjct: 126 VQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT--FCGSPPYAA 180
Query: 497 PEYALYGQLTE--KSDVYSFGVVILEIMCGRKALD 529
PE G+ + + DV+S GV++ ++ G D
Sbjct: 181 PE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 97/215 (45%), Gaps = 28/215 (13%)
Query: 321 IGRGGFGLVY--KGILQDGTTVAVKKVIESDFQGDA--EFCNEVEIISNLKHRNLVPLRG 376
IG+G F V + IL G VAVK + ++ + + EV I+ L H N+V L
Sbjct: 22 IGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 377 CCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKG 436
E YLV +Y G V D+L VA + + + +
Sbjct: 81 VI------ETEKTLYLVMEYASGGEVFDYL---------VAHGRMKEKEARAKFRQIVSA 125
Query: 437 LAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGYLA 496
+ Y H + I HRD+KA N+LLDADM ++ADFG + + G T G+ Y A
Sbjct: 126 VQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT--FCGSPPYAA 180
Query: 497 PEYALYGQLTE--KSDVYSFGVVILEIMCGRKALD 529
PE G+ + + DV+S GV++ ++ G D
Sbjct: 181 PE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 26/216 (12%)
Query: 315 FSQKNFIGRGGFGLVYKGILQ----DGTTVAVK--KVIESDFQGDAEFCNEVEIISNLKH 368
S +G G FG V G L+ +VA+K KV ++ Q +F E I+ H
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQFDH 105
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKN 428
N++ L G + +V + M NG++D F +D T Q
Sbjct: 106 PNIIRLEGVVT------KSKPVMIVTEXMENGSLDS--FLRKHDAQ------FTVIQLVG 151
Query: 429 IILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQ-SREGQSHLTTR 487
++ +A G+ YL HRD+ A NIL+++++ +V+DFGL++ + ++ TTR
Sbjct: 152 MLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
Query: 488 VAGTH-GYLAPEYALYGQLTEKSDVYSFGVVILEIM 522
+ +PE Y + T SDV+S+G+V+ E+M
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 91/213 (42%), Gaps = 22/213 (10%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISN--LKHRNLVPLRGCC 378
+G G +G V + + K+++ D + EI N L H N+V G
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 70
Query: 379 VVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLA 438
G+ +YL +Y G + D + P + P + + G+
Sbjct: 71 ----HRREGNIQYLFLEYCSGGELFDRIEPDIG---------MPEPDAQRFFHQLMAGVV 117
Query: 439 YLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSR-EGQSHLTTRVAGTHGYLAP 497
YLH G+ I HRDIK N+LLD +++DFGLA R + L ++ GT Y+AP
Sbjct: 118 YLH-GI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 174
Query: 498 EYALYGQL-TEKSDVYSFGVVILEIMCGRKALD 529
E + E DV+S G+V+ ++ G D
Sbjct: 175 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 207
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 91/213 (42%), Gaps = 22/213 (10%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISN--LKHRNLVPLRGCC 378
+G G +G V + + K+++ D + EI N L H N+V G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 72
Query: 379 VVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLA 438
G+ +YL +Y G + D + P + P + + G+
Sbjct: 73 ----HRREGNIQYLFLEYCSGGELFDRIEPDIG---------MPEPDAQRFFHQLMAGVV 119
Query: 439 YLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSR-EGQSHLTTRVAGTHGYLAP 497
YLH G+ I HRDIK N+LLD +++DFGLA R + L ++ GT Y+AP
Sbjct: 120 YLH-GI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 498 EYALYGQL-TEKSDVYSFGVVILEIMCGRKALD 529
E + E DV+S G+V+ ++ G D
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 91/213 (42%), Gaps = 22/213 (10%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISN--LKHRNLVPLRGCC 378
+G G +G V + + K+++ D + EI N L H N+V G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 72
Query: 379 VVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLA 438
G+ +YL +Y G + D + P + P + + G+
Sbjct: 73 ----HRREGNIQYLFLEYCSGGELFDRIEPDIG---------MPEPDAQRFFHQLMAGVV 119
Query: 439 YLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSR-EGQSHLTTRVAGTHGYLAP 497
YLH G+ I HRDIK N+LLD +++DFGLA R + L ++ GT Y+AP
Sbjct: 120 YLH-GI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 498 EYALYGQL-TEKSDVYSFGVVILEIMCGRKALD 529
E + E DV+S G+V+ ++ G D
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 91/213 (42%), Gaps = 22/213 (10%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISN--LKHRNLVPLRGCC 378
+G G +G V + + K+++ D + EI N L H N+V G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 71
Query: 379 VVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLA 438
G+ +YL +Y G + D + P + P + + G+
Sbjct: 72 ----HRREGNIQYLFLEYCSGGELFDRIEPDIG---------MPEPDAQRFFHQLMAGVV 118
Query: 439 YLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSR-EGQSHLTTRVAGTHGYLAP 497
YLH G+ I HRDIK N+LLD +++DFGLA R + L ++ GT Y+AP
Sbjct: 119 YLH-GI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 498 EYALYGQL-TEKSDVYSFGVVILEIMCGRKALD 529
E + E DV+S G+V+ ++ G D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 91/213 (42%), Gaps = 22/213 (10%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISN--LKHRNLVPLRGCC 378
+G G +G V + + K+++ D + EI N L H N+V G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 71
Query: 379 VVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLA 438
G+ +YL +Y G + D + P + P + + G+
Sbjct: 72 ----HRREGNIQYLFLEYCSGGELFDRIEPDIG---------MPEPDAQRFFHQLMAGVV 118
Query: 439 YLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSR-EGQSHLTTRVAGTHGYLAP 497
YLH G+ I HRDIK N+LLD +++DFGLA R + L ++ GT Y+AP
Sbjct: 119 YLH-GI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 498 EYALYGQL-TEKSDVYSFGVVILEIMCGRKALD 529
E + E DV+S G+V+ ++ G D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 91/213 (42%), Gaps = 22/213 (10%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISN--LKHRNLVPLRGCC 378
+G G +G V + + K+++ D + EI N L H N+V G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 71
Query: 379 VVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLA 438
G+ +YL +Y G + D + P + P + + G+
Sbjct: 72 ----HRREGNIQYLFLEYCSGGELFDRIEPDIG---------MPEPDAQRFFHQLMAGVV 118
Query: 439 YLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSR-EGQSHLTTRVAGTHGYLAP 497
YLH G+ I HRDIK N+LLD +++DFGLA R + L ++ GT Y+AP
Sbjct: 119 YLH-GI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 498 EYALYGQL-TEKSDVYSFGVVILEIMCGRKALD 529
E + E DV+S G+V+ ++ G D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 91/213 (42%), Gaps = 22/213 (10%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISN--LKHRNLVPLRGCC 378
+G G +G V + + K+++ D + EI N L H N+V G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 72
Query: 379 VVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLA 438
G+ +YL +Y G + D + P + P + + G+
Sbjct: 73 ----HRREGNIQYLFLEYCSGGELFDRIEPDIG---------MPEPDAQRFFHQLMAGVV 119
Query: 439 YLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSR-EGQSHLTTRVAGTHGYLAP 497
YLH G+ I HRDIK N+LLD +++DFGLA R + L ++ GT Y+AP
Sbjct: 120 YLH-GI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 498 EYALYGQL-TEKSDVYSFGVVILEIMCGRKALD 529
E + E DV+S G+V+ ++ G D
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 91/213 (42%), Gaps = 22/213 (10%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISN--LKHRNLVPLRGCC 378
+G G +G V + + K+++ D + EI N L H N+V G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 71
Query: 379 VVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLA 438
G+ +YL +Y G + D + P + P + + G+
Sbjct: 72 ----HRREGNIQYLFLEYCSGGELFDRIEPDIG---------MPEPDAQRFFHQLMAGVV 118
Query: 439 YLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSR-EGQSHLTTRVAGTHGYLAP 497
YLH G+ I HRDIK N+LLD +++DFGLA R + L ++ GT Y+AP
Sbjct: 119 YLH-GI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 498 EYALYGQL-TEKSDVYSFGVVILEIMCGRKALD 529
E + E DV+S G+V+ ++ G D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 120/265 (45%), Gaps = 33/265 (12%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNL-----KHRNLVPLR 375
IGRG + V L+ + KV++ + D E + V+ ++ H LV L
Sbjct: 13 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 72
Query: 376 GCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAK 435
C + S + V +Y+ G++ H+ +R L + +++
Sbjct: 73 SCFQTE------SRLFFVIEYVNGGDLMFHM---------QRQRKLPEEHARFYSAEISL 117
Query: 436 GLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQS-REGQSHLTTRVAGTHGY 494
L YLH + I +RD+K N+LLD++ ++ D+G+ K+ R G + T+ GT Y
Sbjct: 118 ALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSXFCGTPNY 172
Query: 495 LAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLSTSGSPRACLITDWVWSLV--KAG 552
+APE D ++ GV++ E+M GR D+ S D+++ ++ K
Sbjct: 173 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI 232
Query: 553 KVWQALD---PSLLKEDDFLSLNPK 574
++ ++L S+LK FL+ +PK
Sbjct: 233 RIPRSLSVKAASVLKS--FLNKDPK 255
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 120/265 (45%), Gaps = 33/265 (12%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNL-----KHRNLVPLR 375
IGRG + V L+ + KV++ + D E + V+ ++ H LV L
Sbjct: 17 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 76
Query: 376 GCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAK 435
C + S + V +Y+ G++ H+ +R L + +++
Sbjct: 77 SCFQTE------SRLFFVIEYVNGGDLMFHM---------QRQRKLPEEHARFYSAEISL 121
Query: 436 GLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQS-REGQSHLTTRVAGTHGY 494
L YLH + I +RD+K N+LLD++ ++ D+G+ K+ R G + T+ GT Y
Sbjct: 122 ALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSXFCGTPNY 176
Query: 495 LAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLSTSGSPRACLITDWVWSLV--KAG 552
+APE D ++ GV++ E+M GR D+ S D+++ ++ K
Sbjct: 177 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI 236
Query: 553 KVWQALD---PSLLKEDDFLSLNPK 574
++ ++L S+LK FL+ +PK
Sbjct: 237 RIPRSLSVKAASVLKS--FLNKDPK 259
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 91/213 (42%), Gaps = 22/213 (10%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISN--LKHRNLVPLRGCC 378
+G G +G V + + K+++ D + EI N L H N+V G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 71
Query: 379 VVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLA 438
G+ +YL +Y G + D + P + P + + G+
Sbjct: 72 ----HRREGNIQYLFLEYCSGGELFDRIEPDIG---------MPEPDAQRFFHQLMAGVV 118
Query: 439 YLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSR-EGQSHLTTRVAGTHGYLAP 497
YLH G+ I HRDIK N+LLD +++DFGLA R + L ++ GT Y+AP
Sbjct: 119 YLH-GI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 498 EYALYGQL-TEKSDVYSFGVVILEIMCGRKALD 529
E + E DV+S G+V+ ++ G D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 91/213 (42%), Gaps = 22/213 (10%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISN--LKHRNLVPLRGCC 378
+G G +G V + + K+++ D + EI N L H N+V G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 71
Query: 379 VVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLA 438
G+ +YL +Y G + D + P + P + + G+
Sbjct: 72 ----HRREGNIQYLFLEYCSGGELFDRIEPDIG---------MPEPDAQRFFHQLMAGVV 118
Query: 439 YLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSR-EGQSHLTTRVAGTHGYLAP 497
YLH G+ I HRDIK N+LLD +++DFGLA R + L ++ GT Y+AP
Sbjct: 119 YLH-GI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 498 EYALYGQL-TEKSDVYSFGVVILEIMCGRKALD 529
E + E DV+S G+V+ ++ G D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 91/213 (42%), Gaps = 22/213 (10%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISN--LKHRNLVPLRGCC 378
+G G +G V + + K+++ D + EI N L H N+V G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 72
Query: 379 VVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLA 438
G+ +YL +Y G + D + P + P + + G+
Sbjct: 73 ----HRREGNIQYLFLEYCSGGELFDRIEPDIG---------MPEPDAQRFFHQLMAGVV 119
Query: 439 YLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSR-EGQSHLTTRVAGTHGYLAP 497
YLH G+ I HRDIK N+LLD +++DFGLA R + L ++ GT Y+AP
Sbjct: 120 YLH-GI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 498 EYALYGQL-TEKSDVYSFGVVILEIMCGRKALD 529
E + E DV+S G+V+ ++ G D
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 91/213 (42%), Gaps = 22/213 (10%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISN--LKHRNLVPLRGCC 378
+G G +G V + + K+++ D + EI N L H N+V G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 72
Query: 379 VVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLA 438
G+ +YL +Y G + D + P + P + + G+
Sbjct: 73 ----HRREGNIQYLFLEYCSGGELFDRIEPDIG---------MPEPDAQRFFHQLMAGVV 119
Query: 439 YLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSR-EGQSHLTTRVAGTHGYLAP 497
YLH G+ I HRDIK N+LLD +++DFGLA R + L ++ GT Y+AP
Sbjct: 120 YLH-GI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 498 EYALYGQL-TEKSDVYSFGVVILEIMCGRKALD 529
E + E DV+S G+V+ ++ G D
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 91/213 (42%), Gaps = 22/213 (10%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISN--LKHRNLVPLRGCC 378
+G G +G V + + K+++ D + EI N L H N+V G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 72
Query: 379 VVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLA 438
G+ +YL +Y G + D + P + P + + G+
Sbjct: 73 ----HRREGNIQYLFLEYCSGGELFDRIEPDIG---------MPEPDAQRFFHQLMAGVV 119
Query: 439 YLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSR-EGQSHLTTRVAGTHGYLAP 497
YLH G+ I HRDIK N+LLD +++DFGLA R + L ++ GT Y+AP
Sbjct: 120 YLH-GI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 498 EYALYGQL-TEKSDVYSFGVVILEIMCGRKALD 529
E + E DV+S G+V+ ++ G D
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 130/295 (44%), Gaps = 55/295 (18%)
Query: 314 KFSQKNFIGRGGFGLV---YKGILQDGTTVAVKKVIESDFQGDAEFCN----EVEIISNL 366
+++Q +IG G +G+V Y + + T VA+KK+ + Q +C E++I+
Sbjct: 44 RYTQLQYIGEGAYGMVSSAYDHVRK--TRVAIKKISPFEHQT---YCQRTLREIQILLRF 98
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQR 426
+H N++ +R E + Y+V D M + L+ + + L+
Sbjct: 99 RHENVIGIRDILRA-STLEAMRDVYIVQDLM-----ETDLY------KLLKSQQLSNDHI 146
Query: 427 KNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSH--L 484
+ + +GL Y+H + HRD+K +N+L++ ++ DFGLA+ + H
Sbjct: 147 CYFLYQILRGLKYIHSA---NVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGF 203
Query: 485 TTRVAGTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMC------GRKALD-----LST 532
T T Y APE L + KS D++S G ++ E++ G+ LD L
Sbjct: 204 LTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI 263
Query: 533 SGSPRA----CLIT----DWVWSLVKAGKV-WQALDP-----SLLKEDDFLSLNP 573
GSP C+I +++ SL KV W L P +L D L+ NP
Sbjct: 264 LGSPSQEDLNCIINMKARNYLQSLPSKTKVAWAKLFPKSDSKALDLLDRMLTFNP 318
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 91/213 (42%), Gaps = 22/213 (10%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISN--LKHRNLVPLRGCC 378
+G G +G V + + K+++ D + EI N L H N+V G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 71
Query: 379 VVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLA 438
G+ +YL +Y G + D + P + P + + G+
Sbjct: 72 ----HRREGNIQYLFLEYCSGGELFDRIEPDIG---------MPEPDAQRFFHQLMAGVV 118
Query: 439 YLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSR-EGQSHLTTRVAGTHGYLAP 497
YLH G+ I HRDIK N+LLD +++DFGLA R + L ++ GT Y+AP
Sbjct: 119 YLH-GI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 498 EYALYGQL-TEKSDVYSFGVVILEIMCGRKALD 529
E + E DV+S G+V+ ++ G D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 91/213 (42%), Gaps = 22/213 (10%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISN--LKHRNLVPLRGCC 378
+G G +G V + + K+++ D + EI N L H N+V G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 71
Query: 379 VVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLA 438
G+ +YL +Y G + D + P + P + + G+
Sbjct: 72 ----HRREGNIQYLFLEYCSGGELFDRIEPDIG---------MPEPDAQRFFHQLMAGVV 118
Query: 439 YLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSR-EGQSHLTTRVAGTHGYLAP 497
YLH G+ I HRDIK N+LLD +++DFGLA R + L ++ GT Y+AP
Sbjct: 119 YLH-GI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 498 EYALYGQL-TEKSDVYSFGVVILEIMCGRKALD 529
E + E DV+S G+V+ ++ G D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 124/279 (44%), Gaps = 49/279 (17%)
Query: 303 FKIQDLERATDKFSQKNFI-----GRGGFGLVYKGIL------QDGTTVAVKKVIESDFQ 351
FKI LE +F +KN + G G FG V K TTVAVK + E+
Sbjct: 10 FKI--LEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASP 67
Query: 352 GD-AEFCNEVEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSF 410
+ + +E ++ + H +++ L G C DG L+ +Y G++ L S
Sbjct: 68 SELRDLLSEFNVLKQVNHPHVIKLYGACSQDGP------LLLIVEYAKYGSLRGFLRESR 121
Query: 411 NDGSGVA---------------KRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKA 455
G G +R LT + +++G+ YL + + HRD+ A
Sbjct: 122 KVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAA 178
Query: 456 TNILLDADMRARVADFGLAKQSREGQSHLTTRVAGT--HGYLAPEYALYGQLTEKSDVYS 513
NIL+ + +++DFGL++ E S++ R G ++A E T +SDV+S
Sbjct: 179 RNILVAEGRKMKISDFGLSRDVYEEDSYV-KRSQGRIPVKWMAIESLFDHIYTTQSDVWS 237
Query: 514 FGVVILEIMCGRKALDLSTSGSPRACLITDWVWSLVKAG 552
FGV++ EI ++ G+P + + +++L+K G
Sbjct: 238 FGVLLWEI--------VTLGGNPYPGIPPERLFNLLKTG 268
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 132/300 (44%), Gaps = 55/300 (18%)
Query: 314 KFSQKNFIGRGGFGLV---YKGILQDGTTVAVKKVIESDFQGDAEFCN----EVEIISNL 366
+++ ++IG G +G+V Y + + VA+KK+ + Q +C E++I+
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQT---YCQRTLREIKILLRF 78
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQR 426
+H N++ + + E+ + Y+V D M + L+ + + L+
Sbjct: 79 RHENIIGINDI-IRAPTIEQMKDVYIVQDLM-----ETDLY------KLLKTQHLSNDHI 126
Query: 427 KNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSH--L 484
+ + +GL Y+H + HRD+K +N+LL+ ++ DFGLA+ + H
Sbjct: 127 CYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGF 183
Query: 485 TTRVAGTHGYLAPEYALYGQ-LTEKSDVYSFGVVILEIMC------GRKALD-----LST 532
T T Y APE L + T+ D++S G ++ E++ G+ LD L
Sbjct: 184 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI 243
Query: 533 SGSPRA----CLIT----DWVWSLVKAGKV-WQALDP-----SLLKEDDFLSLNPKAIME 578
GSP C+I +++ SL KV W L P +L D L+ NP +E
Sbjct: 244 LGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIE 303
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 132/300 (44%), Gaps = 55/300 (18%)
Query: 314 KFSQKNFIGRGGFGLV---YKGILQDGTTVAVKKVIESDFQGDAEFCN----EVEIISNL 366
+++ ++IG G +G+V Y + + VA+KK+ + Q +C E++I+
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQT---YCQRTLREIKILLRF 76
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQR 426
+H N++ + + E+ + Y+V D M + L+ + + L+
Sbjct: 77 RHENIIGINDI-IRAPTIEQMKDVYIVQDLM-----ETDLY------KLLKTQHLSNDHI 124
Query: 427 KNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSH--L 484
+ + +GL Y+H + HRD+K +N+LL+ ++ DFGLA+ + H
Sbjct: 125 CYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 181
Query: 485 TTRVAGTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMC------GRKALD-----LST 532
T T Y APE L + KS D++S G ++ E++ G+ LD L
Sbjct: 182 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI 241
Query: 533 SGSPRA----CLIT----DWVWSLVKAGKV-WQALDP-----SLLKEDDFLSLNPKAIME 578
GSP C+I +++ SL KV W L P +L D L+ NP +E
Sbjct: 242 LGSPEQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIE 301
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 132/300 (44%), Gaps = 55/300 (18%)
Query: 314 KFSQKNFIGRGGFGLV---YKGILQDGTTVAVKKVIESDFQGDAEFCN----EVEIISNL 366
+++ ++IG G +G+V Y + + VA+KK+ + Q +C E++I+
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQT---YCQRTLREIKILLRF 78
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQR 426
+H N++ + + E+ + Y+V D M + L+ + + L+
Sbjct: 79 RHENIIGINDI-IRAPTIEQMKDVYIVQDLM-----ETDLY------KLLKTQHLSNDHI 126
Query: 427 KNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSH--L 484
+ + +GL Y+H + HRD+K +N+LL+ ++ DFGLA+ + H
Sbjct: 127 CYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 183
Query: 485 TTRVAGTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMC------GRKALD-----LST 532
T T Y APE L + KS D++S G ++ E++ G+ LD L
Sbjct: 184 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI 243
Query: 533 SGSPRA----CLIT----DWVWSLVKAGKV-WQALDP-----SLLKEDDFLSLNPKAIME 578
GSP C+I +++ SL KV W L P +L D L+ NP +E
Sbjct: 244 LGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIE 303
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 98/222 (44%), Gaps = 23/222 (10%)
Query: 313 DKFSQKNFIGRGGFGLVYKGILQ-DGTTVAVKKV-IESDFQGDAEFCNEVEIISNLKHRN 370
D + + IG G +V VA+K++ +E E E++ +S H N
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 69
Query: 371 LVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDD---HLFPSFNDGSGVAKRPLTWPQRK 427
+V VV E +LV + G+V D H+ SGV L
Sbjct: 70 IVSYYTSFVVK------DELWLVMKLLSGGSVLDIIKHIVAKGEHKSGV----LDESTIA 119
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
I+ +V +GL YLH K HRD+KA NILL D ++ADFG++ G +
Sbjct: 120 TILREVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNK 176
Query: 488 V----AGTHGYLAPEYALYGQLTE-KSDVYSFGVVILEIMCG 524
V GT ++APE + + K+D++SFG+ +E+ G
Sbjct: 177 VRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATG 218
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 106/240 (44%), Gaps = 26/240 (10%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNL-----KHRNLVPLR 375
IGRG + V L+ + KV++ + D E + V+ ++ H LV L
Sbjct: 28 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 87
Query: 376 GCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAK 435
C + S + V +Y+ G++ H+ +R L + +++
Sbjct: 88 SCFQTE------SRLFFVIEYVNGGDLMFHM---------QRQRKLPEEHARFYSAEISL 132
Query: 436 GLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQS-REGQSHLTTRVAGTHGY 494
L YLH + I +RD+K N+LLD++ ++ D+G+ K+ R G + T+ GT Y
Sbjct: 133 ALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSXFCGTPNY 187
Query: 495 LAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLSTSGSPRACLITDWVWSLVKAGKV 554
+APE D ++ GV++ E+M GR D+ S D+++ ++ ++
Sbjct: 188 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI 247
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 124/279 (44%), Gaps = 49/279 (17%)
Query: 303 FKIQDLERATDKFSQKNFI-----GRGGFGLVYKGIL------QDGTTVAVKKVIESDFQ 351
FKI LE +F +KN + G G FG V K TTVAVK + E+
Sbjct: 10 FKI--LEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASP 67
Query: 352 GD-AEFCNEVEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSF 410
+ + +E ++ + H +++ L G C DG L+ +Y G++ L S
Sbjct: 68 SELRDLLSEFNVLKQVNHPHVIKLYGACSQDG------PLLLIVEYAKYGSLRGFLRESR 121
Query: 411 NDGSGVA---------------KRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKA 455
G G +R LT + +++G+ YL + ++ HRD+ A
Sbjct: 122 KVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMSLVHRDLAA 178
Query: 456 TNILLDADMRARVADFGLAKQSREGQSHLTTRVAGT--HGYLAPEYALYGQLTEKSDVYS 513
NIL+ + +++DFGL++ E S + R G ++A E T +SDV+S
Sbjct: 179 RNILVAEGRKMKISDFGLSRDVYEEDSXV-KRSQGRIPVKWMAIESLFDHIYTTQSDVWS 237
Query: 514 FGVVILEIMCGRKALDLSTSGSPRACLITDWVWSLVKAG 552
FGV++ EI ++ G+P + + +++L+K G
Sbjct: 238 FGVLLWEI--------VTLGGNPYPGIPPERLFNLLKTG 268
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 91/213 (42%), Gaps = 22/213 (10%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISN--LKHRNLVPLRGCC 378
+G G +G V + + K+++ D + EI N L H N+V G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 71
Query: 379 VVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLA 438
G+ +YL +Y G + D + P + P + + G+
Sbjct: 72 ----HRREGNIQYLFLEYCSGGELFDRIEPDIG---------MPEPDAQRFFHQLMAGVV 118
Query: 439 YLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSR-EGQSHLTTRVAGTHGYLAP 497
YLH G+ I HRDIK N+LLD +++DFGLA R + L ++ GT Y+AP
Sbjct: 119 YLH-GI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 498 EYALYGQL-TEKSDVYSFGVVILEIMCGRKALD 529
E + E DV+S G+V+ ++ G D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 132/300 (44%), Gaps = 55/300 (18%)
Query: 314 KFSQKNFIGRGGFGLV---YKGILQDGTTVAVKKVIESDFQGDAEFCN----EVEIISNL 366
+++ ++IG G +G+V Y + + VA+KK+ + Q +C E++I+
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQT---YCQRTLREIKILLRF 80
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQR 426
+H N++ + + E+ + Y+V D M + L+ + + L+
Sbjct: 81 RHENIIGINDI-IRAPTIEQMKDVYIVQDLM-----ETDLY------KLLKTQHLSNDHI 128
Query: 427 KNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSH--L 484
+ + +GL Y+H + HRD+K +N+LL+ ++ DFGLA+ + H
Sbjct: 129 CYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 185
Query: 485 TTRVAGTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMC------GRKALD-----LST 532
T T Y APE L + KS D++S G ++ E++ G+ LD L
Sbjct: 186 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI 245
Query: 533 SGSPRA----CLIT----DWVWSLVKAGKV-WQALDP-----SLLKEDDFLSLNPKAIME 578
GSP C+I +++ SL KV W L P +L D L+ NP +E
Sbjct: 246 LGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIE 305
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 132/300 (44%), Gaps = 55/300 (18%)
Query: 314 KFSQKNFIGRGGFGLV---YKGILQDGTTVAVKKVIESDFQGDAEFCN----EVEIISNL 366
+++ ++IG G +G+V Y + + VA+KK+ + Q +C E++I+
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQT---YCQRTLREIKILLRF 82
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQR 426
+H N++ + + E+ + Y+V D M + L+ + + L+
Sbjct: 83 RHENIIGINDI-IRAPTIEQMKDVYIVQDLM-----ETDLY------KLLKTQHLSNDHI 130
Query: 427 KNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSH--L 484
+ + +GL Y+H + HRD+K +N+LL+ ++ DFGLA+ + H
Sbjct: 131 CYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGF 187
Query: 485 TTRVAGTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMC------GRKALD-----LST 532
T T Y APE L + KS D++S G ++ E++ G+ LD L
Sbjct: 188 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI 247
Query: 533 SGSPRA----CLIT----DWVWSLVKAGKV-WQALDP-----SLLKEDDFLSLNPKAIME 578
GSP C+I +++ SL KV W L P +L D L+ NP +E
Sbjct: 248 LGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIE 307
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 98/222 (44%), Gaps = 23/222 (10%)
Query: 313 DKFSQKNFIGRGGFGLVYKGILQ-DGTTVAVKKV-IESDFQGDAEFCNEVEIISNLKHRN 370
D + + IG G +V VA+K++ +E E E++ +S H N
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 371 LVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDD---HLFPSFNDGSGVAKRPLTWPQRK 427
+V VV E +LV + G+V D H+ SGV L
Sbjct: 75 IVSYYTSFVVK------DELWLVMKLLSGGSVLDIIKHIVAKGEHKSGV----LDESTIA 124
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
I+ +V +GL YLH K HRD+KA NILL D ++ADFG++ G +
Sbjct: 125 TILREVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNK 181
Query: 488 V----AGTHGYLAPEYALYGQLTE-KSDVYSFGVVILEIMCG 524
V GT ++APE + + K+D++SFG+ +E+ G
Sbjct: 182 VRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATG 223
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 132/300 (44%), Gaps = 55/300 (18%)
Query: 314 KFSQKNFIGRGGFGLV---YKGILQDGTTVAVKKVIESDFQGDAEFCN----EVEIISNL 366
+++ ++IG G +G+V Y + + VA+KK+ + Q +C E++I+
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQT---YCQRTLREIKILLAF 80
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQR 426
+H N++ + + E+ + Y+V D M + L+ + + L+
Sbjct: 81 RHENIIGINDI-IRAPTIEQMKDVYIVQDLM-----ETDLY------KLLKTQHLSNDHI 128
Query: 427 KNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSH--L 484
+ + +GL Y+H + HRD+K +N+LL+ ++ DFGLA+ + H
Sbjct: 129 CYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 185
Query: 485 TTRVAGTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMC------GRKALD-----LST 532
T T Y APE L + KS D++S G ++ E++ G+ LD L
Sbjct: 186 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI 245
Query: 533 SGSPRA----CLIT----DWVWSLVKAGKV-WQALDP-----SLLKEDDFLSLNPKAIME 578
GSP C+I +++ SL KV W L P +L D L+ NP +E
Sbjct: 246 LGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIE 305
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 95/217 (43%), Gaps = 38/217 (17%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIES-----DFQGDAEFCNEVEIISNLKHRNLVPLR 375
IG+G FG+VY G D ++ I+S + Q F E ++ L H N++ L
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALI 88
Query: 376 GCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVA--KRPLTWPQRKNII--- 430
G +P + L P G + + P P K++I
Sbjct: 89 GIM------------------LPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFG 130
Query: 431 LDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQ--SRE---GQSHLT 485
L VA+G+ YL + HRD+ A N +LD +VADFGLA+ RE Q H
Sbjct: 131 LQVARGMEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRH 187
Query: 486 TRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIM 522
R+ + A E + T KSDV+SFGV++ E++
Sbjct: 188 ARLPVK--WTALESLQTYRFTTKSDVWSFGVLLWELL 222
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 97/215 (45%), Gaps = 28/215 (13%)
Query: 321 IGRGGFGLVY--KGILQDGTTVAVKKVIESDFQGDA--EFCNEVEIISNLKHRNLVPLRG 376
IG+G F V + IL G VAV+ + ++ + + EV I+ L H N+V L
Sbjct: 22 IGKGNFAKVKLARHILT-GKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 377 CCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKG 436
E YLV +Y G V D+L VA + + + +
Sbjct: 81 VI------ETEKTLYLVMEYASGGEVFDYL---------VAHGRMKEKEARAKFRQIVSA 125
Query: 437 LAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGYLA 496
+ Y H + I HRD+KA N+LLDADM ++ADFG + + G T G+ Y A
Sbjct: 126 VQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT--FCGSPPYAA 180
Query: 497 PEYALYGQLTE--KSDVYSFGVVILEIMCGRKALD 529
PE G+ + + DV+S GV++ ++ G D
Sbjct: 181 PE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 110/241 (45%), Gaps = 27/241 (11%)
Query: 309 ERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDA--EFCNEVEIISNL 366
E D F + + +G G G+V+K + V +K+I + + + E++++
Sbjct: 21 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 80
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQR 426
+V G DG E + ++M G++D V K+ P++
Sbjct: 81 NSPYIVGFYGAFYSDG------EISICMEHMDGGSLDQ-----------VLKKAGRIPEQ 123
Query: 427 --KNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHL 484
+ + V KGL YL K I HRD+K +NIL+++ ++ DFG++ Q + +
Sbjct: 124 ILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---M 178
Query: 485 TTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLSTSGSPRACLITDW 544
GT Y++PE + +SD++S G+ ++E+ GR + S SGS + D+
Sbjct: 179 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIG-SGSGSMAIFELLDY 237
Query: 545 V 545
+
Sbjct: 238 I 238
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 132/300 (44%), Gaps = 55/300 (18%)
Query: 314 KFSQKNFIGRGGFGLV---YKGILQDGTTVAVKKVIESDFQGDAEFCN----EVEIISNL 366
+++ ++IG G +G+V Y + + VA+KK+ + Q +C E++I+
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQT---YCQRTLREIKILLRF 98
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQR 426
+H N++ + + E+ + Y+V D M + L+ + + L+
Sbjct: 99 RHENIIGINDI-IRAPTIEQMKDVYIVQDLM-----ETDLY------KLLKTQHLSNDHI 146
Query: 427 KNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSH--L 484
+ + +GL Y+H + HRD+K +N+LL+ ++ DFGLA+ + H
Sbjct: 147 CYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 203
Query: 485 TTRVAGTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMC------GRKALD-----LST 532
T T Y APE L + KS D++S G ++ E++ G+ LD L
Sbjct: 204 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI 263
Query: 533 SGSPRA----CLIT----DWVWSLVKAGKV-WQALDP-----SLLKEDDFLSLNPKAIME 578
GSP C+I +++ SL KV W L P +L D L+ NP +E
Sbjct: 264 LGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIE 323
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 132/300 (44%), Gaps = 55/300 (18%)
Query: 314 KFSQKNFIGRGGFGLV---YKGILQDGTTVAVKKVIESDFQGDAEFCN----EVEIISNL 366
+++ ++IG G +G+V Y + + VA+KK+ + Q +C E++I+
Sbjct: 32 RYTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQT---YCQRTLREIKILLRF 86
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQR 426
+H N++ + + E+ + Y+V D M + L+ + + L+
Sbjct: 87 RHENIIGINDI-IRAPTIEQMKDVYIVQDLM-----ETDLY------KLLKTQHLSNDHI 134
Query: 427 KNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSH--L 484
+ + +GL Y+H + HRD+K +N+LL+ ++ DFGLA+ + H
Sbjct: 135 CYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 191
Query: 485 TTRVAGTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMC------GRKALD-----LST 532
T T Y APE L + KS D++S G ++ E++ G+ LD L
Sbjct: 192 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI 251
Query: 533 SGSPRA----CLIT----DWVWSLVKAGKV-WQALDP-----SLLKEDDFLSLNPKAIME 578
GSP C+I +++ SL KV W L P +L D L+ NP +E
Sbjct: 252 LGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIE 311
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 132/300 (44%), Gaps = 55/300 (18%)
Query: 314 KFSQKNFIGRGGFGLV---YKGILQDGTTVAVKKVIESDFQGDAEFCN----EVEIISNL 366
+++ ++IG G +G+V Y + + VA+KK+ + Q +C E++I+
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQT---YCQRTLREIKILLRF 78
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQR 426
+H N++ + + E+ + Y+V D M + L+ + + L+
Sbjct: 79 RHENIIGINDI-IRAPTIEQMKDVYIVQDLM-----ETDLY------KLLKTQHLSNDHI 126
Query: 427 KNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSH--L 484
+ + +GL Y+H + HRD+K +N+LL+ ++ DFGLA+ + H
Sbjct: 127 CYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 183
Query: 485 TTRVAGTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMC------GRKALD-----LST 532
T T Y APE L + KS D++S G ++ E++ G+ LD L
Sbjct: 184 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI 243
Query: 533 SGSPRA----CLIT----DWVWSLVKAGKV-WQALDP-----SLLKEDDFLSLNPKAIME 578
GSP C+I +++ SL KV W L P +L D L+ NP +E
Sbjct: 244 LGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIE 303
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 131/301 (43%), Gaps = 57/301 (18%)
Query: 314 KFSQKNFIGRGGFGLV---YKGILQDGTTVAVKKVIESDFQGDAEFCN----EVEIISNL 366
+++ ++IG G +G+V Y + + VA+KK+ + Q +C E++I+
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQT---YCQRTLREIKILLRF 82
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAK-RPLTWPQ 425
+H N++ + + E+ + Y+V D M D + K + L+
Sbjct: 83 RHENIIGINDI-IRAPTIEQMKDVYIVQDLMET------------DLYKLLKCQHLSNDH 129
Query: 426 RKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSH-- 483
+ + +GL Y+H + HRD+K +N+LL+ ++ DFGLA+ + H
Sbjct: 130 ICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTG 186
Query: 484 LTTRVAGTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMC------GRKALD-----LS 531
T T Y APE L + KS D++S G ++ E++ G+ LD L
Sbjct: 187 FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 246
Query: 532 TSGSPRA----CLIT----DWVWSLVKAGKV-WQALDP-----SLLKEDDFLSLNPKAIM 577
GSP C+I +++ SL KV W L P +L D L+ NP +
Sbjct: 247 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 306
Query: 578 E 578
E
Sbjct: 307 E 307
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 120/265 (45%), Gaps = 33/265 (12%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNL-----KHRNLVPLR 375
IGRG + V L+ + +V++ + D E + V+ ++ H LV L
Sbjct: 60 IGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 119
Query: 376 GCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAK 435
C + S + V +Y+ G++ H+ +R L + +++
Sbjct: 120 SCFQTE------SRLFFVIEYVNGGDLMFHM---------QRQRKLPEEHARFYSAEISL 164
Query: 436 GLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQS-REGQSHLTTRVAGTHGY 494
L YLH + I +RD+K N+LLD++ ++ D+G+ K+ R G + T+ GT Y
Sbjct: 165 ALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSTFCGTPNY 219
Query: 495 LAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLSTSGSPRACLITDWVWSLV--KAG 552
+APE D ++ GV++ E+M GR D+ S D+++ ++ K
Sbjct: 220 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI 279
Query: 553 KVWQALD---PSLLKEDDFLSLNPK 574
++ ++L S+LK FL+ +PK
Sbjct: 280 RIPRSLSVKAASVLKS--FLNKDPK 302
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 132/300 (44%), Gaps = 55/300 (18%)
Query: 314 KFSQKNFIGRGGFGLV---YKGILQDGTTVAVKKVIESDFQGDAEFCN----EVEIISNL 366
+++ ++IG G +G+V Y + + VA+KK+ + Q +C E++I+
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQT---YCQRTLREIKILLRF 76
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQR 426
+H N++ + + E+ + Y+V D M + L+ + + L+
Sbjct: 77 RHENIIGINDI-IRAPTIEQMKDVYIVQDLM-----ETDLY------KLLKTQHLSNDHI 124
Query: 427 KNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSH--L 484
+ + +GL Y+H + HRD+K +N+LL+ ++ DFGLA+ + H
Sbjct: 125 CYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 181
Query: 485 TTRVAGTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMC------GRKALD-----LST 532
T T Y APE L + KS D++S G ++ E++ G+ LD L
Sbjct: 182 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI 241
Query: 533 SGSPRA----CLIT----DWVWSLVKAGKV-WQALDP-----SLLKEDDFLSLNPKAIME 578
GSP C+I +++ SL KV W L P +L D L+ NP +E
Sbjct: 242 LGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIE 301
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 132/300 (44%), Gaps = 55/300 (18%)
Query: 314 KFSQKNFIGRGGFGLV---YKGILQDGTTVAVKKVIESDFQGDAEFCN----EVEIISNL 366
+++ ++IG G +G+V Y + + VA+KK+ + Q +C E++I+
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQT---YCQRTLREIKILLRF 83
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQR 426
+H N++ + + E+ + Y+V D M + L+ + + L+
Sbjct: 84 RHENIIGINDI-IRAPTIEQMKDVYIVQDLM-----ETDLY------KLLKTQHLSNDHI 131
Query: 427 KNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSH--L 484
+ + +GL Y+H + HRD+K +N+LL+ ++ DFGLA+ + H
Sbjct: 132 CYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 188
Query: 485 TTRVAGTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMC------GRKALD-----LST 532
T T Y APE L + KS D++S G ++ E++ G+ LD L
Sbjct: 189 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI 248
Query: 533 SGSPRA----CLIT----DWVWSLVKAGKV-WQALDP-----SLLKEDDFLSLNPKAIME 578
GSP C+I +++ SL KV W L P +L D L+ NP +E
Sbjct: 249 LGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIE 308
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 107/225 (47%), Gaps = 32/225 (14%)
Query: 314 KFSQKNFIGRGGFGLVYKGILQ-DGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLV 372
K+ K+ IGRG +V + + + G AVK + + + E EV + + L
Sbjct: 95 KYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILR 154
Query: 373 PLRG----CCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKN 428
+ G ++D E S +LV+D M G + D+L K L+ + ++
Sbjct: 155 QVAGHPHIITLIDS-YESSSFMFLVFDLMRKGELFDYL---------TEKVALSEKETRS 204
Query: 429 IILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRV 488
I+ + + +++LH I HRD+K NILLD +M+ R++DFG + G+ +
Sbjct: 205 IMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEK--LREL 259
Query: 489 AGTHGYLAPE---------YALYGQLTEKSDVYSFGVVILEIMCG 524
GT GYLAPE + YG+ + D+++ GV++ ++ G
Sbjct: 260 CGTPGYLAPEILKCSMDETHPGYGK---EVDLWACGVILFTLLAG 301
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 132/300 (44%), Gaps = 55/300 (18%)
Query: 314 KFSQKNFIGRGGFGLV---YKGILQDGTTVAVKKVIESDFQGDAEFCN----EVEIISNL 366
+++ ++IG G +G+V Y + + VA+KK+ + Q +C E++I+
Sbjct: 30 RYTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQT---YCQRTLREIKILLRF 84
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQR 426
+H N++ + + E+ + Y+V D M + L+ + + L+
Sbjct: 85 RHENIIGINDI-IRAPTIEQMKDVYIVQDLM-----ETDLY------KLLKTQHLSNDHI 132
Query: 427 KNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSH--L 484
+ + +GL Y+H + HRD+K +N+LL+ ++ DFGLA+ + H
Sbjct: 133 CYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 189
Query: 485 TTRVAGTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMC------GRKALD-----LST 532
T T Y APE L + KS D++S G ++ E++ G+ LD L
Sbjct: 190 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI 249
Query: 533 SGSPRA----CLIT----DWVWSLVKAGKV-WQALDP-----SLLKEDDFLSLNPKAIME 578
GSP C+I +++ SL KV W L P +L D L+ NP +E
Sbjct: 250 LGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIE 309
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 132/300 (44%), Gaps = 55/300 (18%)
Query: 314 KFSQKNFIGRGGFGLV---YKGILQDGTTVAVKKVIESDFQGDAEFCN----EVEIISNL 366
+++ ++IG G +G+V Y + + VA+KK+ + Q +C E++I+
Sbjct: 21 RYTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQT---YCQRTLREIKILLRF 75
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQR 426
+H N++ + + E+ + Y+V D M + L+ + + L+
Sbjct: 76 RHENIIGINDI-IRAPTIEQMKDVYIVQDLM-----ETDLY------KLLKTQHLSNDHI 123
Query: 427 KNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSH--L 484
+ + +GL Y+H + HRD+K +N+LL+ ++ DFGLA+ + H
Sbjct: 124 CYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 180
Query: 485 TTRVAGTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMC------GRKALD-----LST 532
T T Y APE L + KS D++S G ++ E++ G+ LD L
Sbjct: 181 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI 240
Query: 533 SGSPRA----CLIT----DWVWSLVKAGKV-WQALDP-----SLLKEDDFLSLNPKAIME 578
GSP C+I +++ SL KV W L P +L D L+ NP +E
Sbjct: 241 LGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIE 300
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 102/222 (45%), Gaps = 26/222 (11%)
Query: 308 LERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDA--EFCNEVEIISN 365
+E D F + + +G G G+V+K + V +K+I + + + E++++
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 366 LKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQ 425
+V G DG E + ++M G++D V K+ P+
Sbjct: 61 CNSPYIVGFYGAFYSDG------EISICMEHMDGGSLDQ-----------VLKKAGRIPE 103
Query: 426 R--KNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSH 483
+ + + V KGL YL K I HRD+K +NIL+++ ++ DFG++ Q +
Sbjct: 104 QILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--- 158
Query: 484 LTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGR 525
+ GT Y++PE + +SD++S G+ ++E+ GR
Sbjct: 159 MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 132/300 (44%), Gaps = 55/300 (18%)
Query: 314 KFSQKNFIGRGGFGLV---YKGILQDGTTVAVKKVIESDFQGDAEFCN----EVEIISNL 366
+++ ++IG G +G+V Y + + VA+KK+ + Q +C E++I+
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQT---YCQRTLREIKILLRF 82
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQR 426
+H N++ + + E+ + Y+V D M + L+ + + L+
Sbjct: 83 RHENIIGINDI-IRAPTIEQMKDVYIVQDLM-----ETDLY------KLLKTQHLSNDHI 130
Query: 427 KNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSH--L 484
+ + +GL Y+H + HRD+K +N+LL+ ++ DFGLA+ + H
Sbjct: 131 CYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 187
Query: 485 TTRVAGTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMC------GRKALD-----LST 532
T T Y APE L + KS D++S G ++ E++ G+ LD L
Sbjct: 188 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI 247
Query: 533 SGSPRA----CLIT----DWVWSLVKAGKV-WQALDP-----SLLKEDDFLSLNPKAIME 578
GSP C+I +++ SL KV W L P +L D L+ NP +E
Sbjct: 248 LGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIE 307
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 102/221 (46%), Gaps = 20/221 (9%)
Query: 313 DKFSQKNFIGRGGFGLVYKGILQ-DGTTVAVKKVIES-DFQGDAEFC-NEVEIISNLKHR 369
D++ IG G +G+V + G VA+KK+ + D +A+ E++I+ + KH
Sbjct: 55 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 114
Query: 370 NLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNI 429
N++ ++ Y+V D M + D H + +PLT +
Sbjct: 115 NIIAIKDILRPTVPYGEFKSVYVVLDLMES---DLHQIIH-------SSQPLTLEHVRYF 164
Query: 430 ILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAK---QSREGQSHLTT 486
+ + +GL Y+H + HRD+K +N+L++ + ++ DFG+A+ S + T
Sbjct: 165 LYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMT 221
Query: 487 RVAGTHGYLAPEYAL-YGQLTEKSDVYSFGVVILEIMCGRK 526
T Y APE L + T+ D++S G + E++ R+
Sbjct: 222 EYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 96/215 (44%), Gaps = 28/215 (13%)
Query: 321 IGRGGFGLVY--KGILQDGTTVAVKKVIESDFQGDA--EFCNEVEIISNLKHRNLVPLRG 376
IG+G F V + IL G VAV+ + ++ + + EV I+ L H N+V L
Sbjct: 22 IGKGNFAKVKLARHILT-GKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 377 CCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKG 436
E YLV +Y G V D+L VA + + + +
Sbjct: 81 VI------ETEKTLYLVMEYASGGEVFDYL---------VAHGRMKEKEARAKFRQIVSA 125
Query: 437 LAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGYLA 496
+ Y H + I HRD+KA N+LLDADM ++ADFG + + G G+ Y A
Sbjct: 126 VQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDEFCGSPPYAA 180
Query: 497 PEYALYGQLTE--KSDVYSFGVVILEIMCGRKALD 529
PE G+ + + DV+S GV++ ++ G D
Sbjct: 181 PE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 103/219 (47%), Gaps = 26/219 (11%)
Query: 313 DKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKV---IESDFQGDAEFCNEVEIISNLKH 368
+++ + IG G +G V + G VAVKK+ +S + E+ ++ ++KH
Sbjct: 27 ERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKH 85
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAK-RPLTWPQRK 427
N++ L E ++ YLV HL + D + + K + LT +
Sbjct: 86 ENVIGLLDVFTPARSLEEFNDVYLV----------THLMGA--DLNNIVKCQKLTDDHVQ 133
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+I + +GL Y+H I HRD+K +N+ ++ D ++ DFGLA R +T
Sbjct: 134 FLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLA---RHTDDEMTGY 187
Query: 488 VAGTHGYLAPEYAL-YGQLTEKSDVYSFGVVILEIMCGR 525
VA T Y APE L + + D++S G ++ E++ GR
Sbjct: 188 VA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 102/221 (46%), Gaps = 20/221 (9%)
Query: 313 DKFSQKNFIGRGGFGLVYKGILQ-DGTTVAVKKVIES-DFQGDAEFC-NEVEIISNLKHR 369
D++ IG G +G+V + G VA+KK+ + D +A+ E++I+ + KH
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 113
Query: 370 NLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNI 429
N++ ++ Y+V D M + D H + +PLT +
Sbjct: 114 NIIAIKDILRPTVPYGEFKSVYVVLDLMES---DLHQIIH-------SSQPLTLEHVRYF 163
Query: 430 ILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAK---QSREGQSHLTT 486
+ + +GL Y+H + HRD+K +N+L++ + ++ DFG+A+ S + T
Sbjct: 164 LYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMT 220
Query: 487 RVAGTHGYLAPEYAL-YGQLTEKSDVYSFGVVILEIMCGRK 526
T Y APE L + T+ D++S G + E++ R+
Sbjct: 221 EYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 102/222 (45%), Gaps = 26/222 (11%)
Query: 308 LERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDA--EFCNEVEIISN 365
+E D F + + +G G G+V+K + V +K+I + + + E++++
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 366 LKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQ 425
+V G DG E + ++M G++D V K+ P+
Sbjct: 61 CNSPYIVGFYGAFYSDG------EISICMEHMDGGSLDQ-----------VLKKAGRIPE 103
Query: 426 R--KNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSH 483
+ + + V KGL YL K I HRD+K +NIL+++ ++ DFG++ Q +
Sbjct: 104 QILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--- 158
Query: 484 LTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGR 525
+ GT Y++PE + +SD++S G+ ++E+ GR
Sbjct: 159 MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 103/240 (42%), Gaps = 29/240 (12%)
Query: 291 RPKLRPNTGSIWFKIQDLERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESD- 349
P+L S+ K++ + F +G+G FG V+ + K ++ D
Sbjct: 1 EPELNKERPSLQIKLK-----IEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDV 55
Query: 350 --FQGDAEFCNEVE--IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDH 405
D E C VE ++S + C +N + V +Y+ G++ H
Sbjct: 56 VLMDDDVE-CTMVEKRVLSLAWEHPFLTHMFCTFQTKEN-----LFFVMEYLNGGDLMYH 109
Query: 406 LFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMR 465
+ K L+ + ++ GL +LH I +RD+K NILLD D
Sbjct: 110 I-------QSCHKFDLS--RATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGH 157
Query: 466 ARVADFGLAKQSREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGR 525
++ADFG+ K++ G + T GT Y+APE L + D +SFGV++ E++ G+
Sbjct: 158 IKIADFGMCKENMLGDAK-TNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 216
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 102/222 (45%), Gaps = 26/222 (11%)
Query: 308 LERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDA--EFCNEVEIISN 365
+E D F + + +G G G+V+K + V +K+I + + + E++++
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 366 LKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQ 425
+V G DG E + ++M G++D V K+ P+
Sbjct: 61 CNSPYIVGFYGAFYSDG------EISICMEHMDGGSLDQ-----------VLKKAGRIPE 103
Query: 426 R--KNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSH 483
+ + + V KGL YL K I HRD+K +NIL+++ ++ DFG++ Q +
Sbjct: 104 QILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--- 158
Query: 484 LTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGR 525
+ GT Y++PE + +SD++S G+ ++E+ GR
Sbjct: 159 MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 102/222 (45%), Gaps = 26/222 (11%)
Query: 308 LERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDA--EFCNEVEIISN 365
+E D F + + +G G G+V+K + V +K+I + + + E++++
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 366 LKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQ 425
+V G DG E + ++M G++D V K+ P+
Sbjct: 61 CNSPYIVGFYGAFYSDG------EISICMEHMDGGSLDQ-----------VLKKAGRIPE 103
Query: 426 R--KNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSH 483
+ + + V KGL YL K I HRD+K +NIL+++ ++ DFG++ Q +
Sbjct: 104 QILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--- 158
Query: 484 LTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGR 525
+ GT Y++PE + +SD++S G+ ++E+ GR
Sbjct: 159 MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 131/297 (44%), Gaps = 49/297 (16%)
Query: 314 KFSQKNFIGRGGFGLV---YKGILQDGTTVAVKKVIESDFQGDAE-FCNEVEIISNLKHR 369
+++ ++IG G +G+V Y + + VA+KK+ + Q + E++I+ +H
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHE 85
Query: 370 NLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNI 429
N++ + + E+ + Y+V D M + L+ + + L+
Sbjct: 86 NIIGINDI-IRAPTIEQMKDVYIVQDLM-----ETDLY------KLLKTQHLSNDHICYF 133
Query: 430 ILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSH--LTTR 487
+ + +GL Y+H + HRD+K +N+LL+ ++ DFGLA+ + H T
Sbjct: 134 LYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTE 190
Query: 488 VAGTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMC------GRKALD-----LSTSGS 535
T Y APE L + KS D++S G ++ E++ G+ LD L GS
Sbjct: 191 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 250
Query: 536 PRA----CLIT----DWVWSLVKAGKV-WQALDP-----SLLKEDDFLSLNPKAIME 578
P C+I +++ SL KV W L P +L D L+ NP +E
Sbjct: 251 PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIE 307
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 94/205 (45%), Gaps = 21/205 (10%)
Query: 321 IGRGGFGLV-YKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPLRGCCV 379
IG G G+V G VAVK + Q NEV I+ + +H N+V + +
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL 112
Query: 380 VDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLAY 439
V G E +++ +++ G + D V++ L Q + V + LAY
Sbjct: 113 V------GEELWVLMEFLQGGALTDI----------VSQVRLNEEQIATVCEAVLQALAY 156
Query: 440 LHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGYLAPEY 499
LH + HRDIK+ +ILL D R +++DFG Q + + GT ++APE
Sbjct: 157 LH---AQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPK-RKXLVGTPYWMAPEV 212
Query: 500 ALYGQLTEKSDVYSFGVVILEIMCG 524
+ D++S G++++E++ G
Sbjct: 213 ISRSLYATEVDIWSLGIMVIEMVDG 237
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 123/279 (44%), Gaps = 49/279 (17%)
Query: 303 FKIQDLERATDKFSQKNFI-----GRGGFGLVYKGIL------QDGTTVAVKKVIESDFQ 351
FKI LE +F +KN + G G FG V K TTVAVK + E+
Sbjct: 10 FKI--LEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASP 67
Query: 352 GD-AEFCNEVEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSF 410
+ + +E ++ + H +++ L G C DG L+ +Y G++ L S
Sbjct: 68 SELRDLLSEFNVLKQVNHPHVIKLYGACSQDG------PLLLIVEYAKYGSLRGFLRESR 121
Query: 411 NDGSGVA---------------KRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKA 455
G G +R LT + +++G+ YL + + HRD+ A
Sbjct: 122 KVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAA 178
Query: 456 TNILLDADMRARVADFGLAKQSREGQSHLTTRVAGT--HGYLAPEYALYGQLTEKSDVYS 513
NIL+ + +++DFGL++ E S + R G ++A E T +SDV+S
Sbjct: 179 RNILVAEGRKMKISDFGLSRDVYEEDSXV-KRSQGRIPVKWMAIESLFDHIYTTQSDVWS 237
Query: 514 FGVVILEIMCGRKALDLSTSGSPRACLITDWVWSLVKAG 552
FGV++ EI ++ G+P + + +++L+K G
Sbjct: 238 FGVLLWEI--------VTLGGNPYPGIPPERLFNLLKTG 268
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 95/215 (44%), Gaps = 28/215 (13%)
Query: 321 IGRGGFGLVY--KGILQDGTTVAVKKVIESDFQGDA--EFCNEVEIISNLKHRNLVPLRG 376
IG+G F V + IL G VAVK + ++ + + EV I+ L H N+V L
Sbjct: 22 IGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 377 CCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKG 436
E YLV +Y G V D+L VA + + + +
Sbjct: 81 VI------ETEKTLYLVMEYASGGEVFDYL---------VAHGRMKEKEARAKFRQIVSA 125
Query: 437 LAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGYLA 496
+ Y H + I HRD+KA N+LLDADM ++ADFG + + G G Y A
Sbjct: 126 VQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDAFCGAPPYAA 180
Query: 497 PEYALYGQLTE--KSDVYSFGVVILEIMCGRKALD 529
PE G+ + + DV+S GV++ ++ G D
Sbjct: 181 PE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 121/267 (45%), Gaps = 39/267 (14%)
Query: 314 KFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVI-ESDFQG-DAEFCNEVEIISNLKHRN 370
K+ + IG+G FG V+K + G VA+KKV+ E++ +G E++I+ LKH N
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 371 LVPLRGCCVVDGD--NERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL---TWPQ 425
+V L C N + YLV+D+ + D +G+ L T +
Sbjct: 79 VVNLIEICRTKASPYNRCKASIYLVFDFCEH------------DLAGLLSNVLVKFTLSE 126
Query: 426 RKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQ---SREGQS 482
K ++ + GL Y+H + I HRD+KA N+L+ D ++ADFGLA+ ++ Q
Sbjct: 127 IKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQP 183
Query: 483 HLTTRVAGTHGYLAPEYAL----YGQLTEKSDVYSFGVVILEIMCGRKALDLSTSGSPRA 538
+ T Y PE L YG D++ G ++ E+ + +T A
Sbjct: 184 NRYXNRVVTLWYRPPELLLGERDYG---PPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLA 240
Query: 539 CL------ITDWVWSLVKAGKVWQALD 559
+ IT VW V ++++ L+
Sbjct: 241 LISQLCGSITPEVWPNVDNYELYEKLE 267
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 120/267 (44%), Gaps = 39/267 (14%)
Query: 314 KFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVI-ESDFQG-DAEFCNEVEIISNLKHRN 370
K+ + IG+G FG V+K + G VA+KKV+ E++ +G E++I+ LKH N
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 371 LVPLRGCCVVDGD--NERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL---TWPQ 425
+V L C N YLV+D+ + D +G+ L T +
Sbjct: 79 VVNLIEICRTKASPYNRCKGSIYLVFDFCEH------------DLAGLLSNVLVKFTLSE 126
Query: 426 RKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQ---SREGQS 482
K ++ + GL Y+H + I HRD+KA N+L+ D ++ADFGLA+ ++ Q
Sbjct: 127 IKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQP 183
Query: 483 HLTTRVAGTHGYLAPEYAL----YGQLTEKSDVYSFGVVILEIMCGRKALDLSTSGSPRA 538
+ T Y PE L YG D++ G ++ E+ + +T A
Sbjct: 184 NRYXNRVVTLWYRPPELLLGERDYG---PPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLA 240
Query: 539 CL------ITDWVWSLVKAGKVWQALD 559
+ IT VW V ++++ L+
Sbjct: 241 LISQLCGSITPEVWPNVDNYELYEKLE 267
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 102/222 (45%), Gaps = 26/222 (11%)
Query: 308 LERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDA--EFCNEVEIISN 365
+E D F + + +G G G+V+K + V +K+I + + + E++++
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 366 LKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQ 425
+V G DG E + ++M G++D V K+ P+
Sbjct: 61 CNSPYIVGFYGAFYSDG------EISICMEHMDGGSLDQ-----------VLKKAGRIPE 103
Query: 426 R--KNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSH 483
+ + + V KGL YL K I HRD+K +NIL+++ ++ DFG++ Q +
Sbjct: 104 QILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--- 158
Query: 484 LTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGR 525
+ GT Y++PE + +SD++S G+ ++E+ GR
Sbjct: 159 MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 108/247 (43%), Gaps = 41/247 (16%)
Query: 296 PNTGSIWFKIQDLERATDKFSQKNFIGRGGFGLVYK----GILQDGT--TVAVKKVIESD 349
P S W E D+ + +GRG FG V + GI + T TVAVK + E
Sbjct: 17 PYDASKW------EFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA 70
Query: 350 FQGDAE-FCNEVEIISNLKHR-NLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHL- 406
+ +E++I+ ++ H N+V L G C + G ++ ++ GN+ +L
Sbjct: 71 THSEHRALMSELKILIHIGHHLNVVNLLGACT-----KPGGPLMVIVEFCKFGNLSTYLR 125
Query: 407 -----FPSFNDGSGVAKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLD 461
F + + K LT VAKG+ +L HRD+ A NILL
Sbjct: 126 SKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLS 182
Query: 462 ADMRARVADFGLAKQ-------SREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSF 514
++ DFGLA+ R+G + L + ++APE T +SDV+SF
Sbjct: 183 EKNVVKICDFGLARDIXKDPDXVRKGDARLPLK------WMAPETIFDRVYTIQSDVWSF 236
Query: 515 GVVILEI 521
GV++ EI
Sbjct: 237 GVLLWEI 243
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 101/221 (45%), Gaps = 26/221 (11%)
Query: 309 ERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDA--EFCNEVEIISNL 366
E D F + + +G G G+V+K + V +K+I + + + E++++
Sbjct: 5 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 64
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQR 426
+V G DG E + ++M G++D V K+ P++
Sbjct: 65 NSPYIVGFYGAFYSDG------EISICMEHMDGGSLDQ-----------VLKKAGRIPEQ 107
Query: 427 --KNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHL 484
+ + V KGL YL K I HRD+K +NIL+++ ++ DFG++ Q + +
Sbjct: 108 ILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---EM 162
Query: 485 TTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGR 525
GT Y++PE + +SD++S G+ ++E+ GR
Sbjct: 163 ANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 120/267 (44%), Gaps = 39/267 (14%)
Query: 314 KFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVI-ESDFQG-DAEFCNEVEIISNLKHRN 370
K+ + IG+G FG V+K + G VA+KKV+ E++ +G E++I+ LKH N
Sbjct: 18 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 77
Query: 371 LVPLRGCCVVDGD--NERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL---TWPQ 425
+V L C N YLV+D+ + D +G+ L T +
Sbjct: 78 VVNLIEICRTKASPYNRCKGSIYLVFDFCEH------------DLAGLLSNVLVKFTLSE 125
Query: 426 RKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQ---SREGQS 482
K ++ + GL Y+H + I HRD+KA N+L+ D ++ADFGLA+ ++ Q
Sbjct: 126 IKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQP 182
Query: 483 HLTTRVAGTHGYLAPEYAL----YGQLTEKSDVYSFGVVILEIMCGRKALDLSTSGSPRA 538
+ T Y PE L YG D++ G ++ E+ + +T A
Sbjct: 183 NRYXNRVVTLWYRPPELLLGERDYG---PPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLA 239
Query: 539 CL------ITDWVWSLVKAGKVWQALD 559
+ IT VW V ++++ L+
Sbjct: 240 LISQLCGSITPEVWPNVDNYELYEKLE 266
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 101/222 (45%), Gaps = 32/222 (14%)
Query: 312 TDKFSQKNFIGRGGFGLVYK------GILQDGTTVAVKKVIESDFQGDAEFCNEVEIISN 365
+D + K +G+G F +V + G+ + KK+ DFQ + E I
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQ---KLEREARICRK 61
Query: 366 LKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQ 425
L+H N+V L + S YLV+D + G + F D VA+ +
Sbjct: 62 LQHPNIVRLHDSI------QEESFHYLVFDLVTGGEL-------FEDI--VAREFYSEAD 106
Query: 426 RKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRA---RVADFGLAKQSREGQS 482
+ I + + +AY H I HR++K N+LL + + ++ADFGLA + + ++
Sbjct: 107 ASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA 163
Query: 483 HLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
AGT GYL+PE ++ D+++ GV++ ++ G
Sbjct: 164 --WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 109/221 (49%), Gaps = 23/221 (10%)
Query: 311 ATDKFSQKNFIGRGGFGLVYKGILQD-GTTVAVKKV-IESDFQGDAEFCNEVEIISNLKH 368
++ +F Q +G G + VYKG+ + G VA+K+V ++S+ + E+ ++ LKH
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRP--LTWPQR 426
N+V R V+ +N+ LV+++M N + D V P L
Sbjct: 63 ENIV--RLYDVIHTENKLT----LVFEFMDND------LKKYMDSRTVGNTPRGLELNLV 110
Query: 427 KNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTT 486
K + +GLA+ H + I HRD+K N+L++ + ++ DFGLA+ + ++
Sbjct: 111 KYFQWQLLQGLAFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSS 167
Query: 487 RVAGTHGYLAPEYALYGQLTEKS--DVYSFGVVILEIMCGR 525
V T Y AP+ L G T + D++S G ++ E++ G+
Sbjct: 168 EVV-TLWYRAPD-VLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 26/219 (11%)
Query: 313 DKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKV---IESDFQGDAEFCNEVEIISNLKH 368
+++ + +G G +G V + G VAVKK+ +S + E+ ++ ++KH
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKH 85
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAK-RPLTWPQRK 427
N++ L E ++ YLV HL + D + + K + LT +
Sbjct: 86 ENVIGLLDVFTPARSLEEFNDVYLV----------THLMGA--DLNNIVKCQKLTDDHVQ 133
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+I + +GL Y+H I HRD+K +N+ ++ D ++ DFGLA R +T
Sbjct: 134 FLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLA---RHTDDEMTGY 187
Query: 488 VAGTHGYLAPEYAL-YGQLTEKSDVYSFGVVILEIMCGR 525
VA T Y APE L + + D++S G ++ E++ GR
Sbjct: 188 VA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 26/219 (11%)
Query: 313 DKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKV---IESDFQGDAEFCNEVEIISNLKH 368
+++ + +G G +G V + G VAVKK+ +S + E+ ++ ++KH
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKH 80
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAK-RPLTWPQRK 427
N++ L E ++ YLV HL + D + + K + LT +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLV----------THLMGA--DLNNIVKCQKLTDDHVQ 128
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+I + +GL Y+H I HRD+K +N+ ++ D ++ DFGLA R +T
Sbjct: 129 FLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGX 182
Query: 488 VAGTHGYLAPEYAL-YGQLTEKSDVYSFGVVILEIMCGR 525
VA T Y APE L + + D++S G ++ E++ GR
Sbjct: 183 VA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 90/213 (42%), Gaps = 22/213 (10%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISN--LKHRNLVPLRGCC 378
+G G G V + + K+++ D + EI N L H N+V G
Sbjct: 14 LGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 71
Query: 379 VVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLA 438
G+ +YL +Y G + D + P + P + + G+
Sbjct: 72 ----HRREGNIQYLFLEYCSGGELFDRIEPDIG---------MPEPDAQRFFHQLMAGVV 118
Query: 439 YLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSR-EGQSHLTTRVAGTHGYLAP 497
YLH G+ I HRDIK N+LLD +++DFGLA R + L ++ GT Y+AP
Sbjct: 119 YLH-GI--GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 498 EYALYGQL-TEKSDVYSFGVVILEIMCGRKALD 529
E + E DV+S G+V+ ++ G D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 101/222 (45%), Gaps = 32/222 (14%)
Query: 312 TDKFSQKNFIGRGGFGLVYK------GILQDGTTVAVKKVIESDFQGDAEFCNEVEIISN 365
+D + K +G+G F +V + G+ + KK+ DFQ + E I
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQ---KLEREARICRK 61
Query: 366 LKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQ 425
L+H N+V L + S YLV+D + G + F D VA+ +
Sbjct: 62 LQHPNIVRLHDSI------QEESFHYLVFDLVTGGEL-------FEDI--VAREFYSEAD 106
Query: 426 RKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRA---RVADFGLAKQSREGQS 482
+ I + + +AY H I HR++K N+LL + + ++ADFGLA + + ++
Sbjct: 107 ASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA 163
Query: 483 HLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
AGT GYL+PE ++ D+++ GV++ ++ G
Sbjct: 164 --WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 130/304 (42%), Gaps = 63/304 (20%)
Query: 314 KFSQKNFIGRGGFGLV---YKGILQDGTTVAVKKVIESDFQGDAEFCN----EVEIISNL 366
+++ ++IG G +G+V Y + + VA+KK+ + Q +C E++I+
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQT---YCQRTLREIKILLRF 98
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQR 426
+H N++ + + E+ + YLV M G+ + K T
Sbjct: 99 RHENIIGINDI-IRAPTIEQMKDVYLVTHLM---------------GADLYKLLKTQHLS 142
Query: 427 KNII----LDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQS 482
+ I + +GL Y+H + HRD+K +N+LL+ ++ DFGLA+ +
Sbjct: 143 NDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHD 199
Query: 483 H--LTTRVAGTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMC------GRKALD---- 529
H T T Y APE L + KS D++S G ++ E++ G+ LD
Sbjct: 200 HTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNH 259
Query: 530 -LSTSGSPRA----CLIT----DWVWSLVKAGKV-WQALDP-----SLLKEDDFLSLNPK 574
L GSP C+I +++ SL KV W L P +L D L+ NP
Sbjct: 260 ILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPH 319
Query: 575 AIME 578
+E
Sbjct: 320 KRIE 323
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 99/215 (46%), Gaps = 28/215 (13%)
Query: 321 IGRGGFGLVY--KGILQDGTTVAVKKVIESDFQGDA--EFCNEVEIISNLKHRNLVPLRG 376
IG+G F V + IL G VA+K + ++ + + EV I+ L H N+V L
Sbjct: 20 IGKGNFAKVKLARHILT-GREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFE 78
Query: 377 CCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKG 436
E YL+ +Y G V D+L VA + + ++ +
Sbjct: 79 VI------ETEKTLYLIMEYASGGEVFDYL---------VAHGRMKEKEARSKFRQIVSA 123
Query: 437 LAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGYLA 496
+ Y H + I HRD+KA N+LLDADM ++ADFG + + G L T G+ Y A
Sbjct: 124 VQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVG-GKLDT-FCGSPPYAA 178
Query: 497 PEYALYGQLTE--KSDVYSFGVVILEIMCGRKALD 529
PE G+ + + DV+S GV++ ++ G D
Sbjct: 179 PEL-FQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 212
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 101/222 (45%), Gaps = 32/222 (14%)
Query: 312 TDKFSQKNFIGRGGFGLVYK------GILQDGTTVAVKKVIESDFQGDAEFCNEVEIISN 365
+D + K +G+G F +V + G+ + KK+ DFQ + E I
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQ---KLEREARICRK 60
Query: 366 LKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQ 425
L+H N+V L + S YLV+D + G + F D VA+ +
Sbjct: 61 LQHPNIVRLHDSI------QEESFHYLVFDLVTGGEL-------FEDI--VAREFYSEAD 105
Query: 426 RKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRA---RVADFGLAKQSREGQS 482
+ I + + +AY H I HR++K N+LL + + ++ADFGLA + + ++
Sbjct: 106 ASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA 162
Query: 483 HLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
AGT GYL+PE ++ D+++ GV++ ++ G
Sbjct: 163 --WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 99/212 (46%), Gaps = 28/212 (13%)
Query: 321 IGRGGFGLV---YKGILQDGTTVAVKKVIESDFQG---DAEFCNEVEIISNLKHRNLVPL 374
+G G +G V Y L+ VAVKK + FQ E+ ++ +LKH N++ L
Sbjct: 36 VGSGAYGSVCSAYDARLRQ--KVAVKK-LSRPFQSLIHARRTYRELRLLKHLKHENVIGL 92
Query: 375 RGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVA 434
E SE YLV M + + V + L+ + ++ +
Sbjct: 93 LDVFTPATSIEDFSEVYLVTTLM-----------GADLNNIVKSQALSDEHVQFLVYQLL 141
Query: 435 KGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGY 494
+GL Y+H I HRD+K +N+ ++ D R+ DFGLA+Q+ E +T VA T Y
Sbjct: 142 RGLKYIHSA---GIIHRDLKPSNVAVNEDSELRILDFGLARQADE---EMTGYVA-TRWY 194
Query: 495 LAPEYAL-YGQLTEKSDVYSFGVVILEIMCGR 525
APE L + + D++S G ++ E++ G+
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 26/219 (11%)
Query: 313 DKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKV---IESDFQGDAEFCNEVEIISNLKH 368
+++ + +G G +G V + G VAVKK+ +S + E+ ++ ++KH
Sbjct: 33 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKH 91
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAK-RPLTWPQRK 427
N++ L E ++ YLV HL + D + + K + LT +
Sbjct: 92 ENVIGLLDVFTPARSLEEFNDVYLV----------THLMGA--DLNNIVKCQKLTDDHVQ 139
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+I + +GL Y+H I HRD+K +N+ ++ D ++ DFGLA R +T
Sbjct: 140 FLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLA---RHTDDEMTGY 193
Query: 488 VAGTHGYLAPEYAL-YGQLTEKSDVYSFGVVILEIMCGR 525
VA T Y APE L + + D++S G ++ E++ GR
Sbjct: 194 VA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 26/219 (11%)
Query: 313 DKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKV---IESDFQGDAEFCNEVEIISNLKH 368
+++ + +G G +G V + G VAVKK+ +S + E+ ++ ++KH
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKH 80
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAK-RPLTWPQRK 427
N++ L E ++ YLV HL + D + + K + LT +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLV----------THLMGA--DLNNIVKXQKLTDDHVQ 128
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+I + +GL Y+H I HRD+K +N+ ++ D ++ DFGLA R +T
Sbjct: 129 FLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLA---RHTDDEMTGY 182
Query: 488 VAGTHGYLAPEYAL-YGQLTEKSDVYSFGVVILEIMCGR 525
VA T Y APE L + + D++S G ++ E++ GR
Sbjct: 183 VA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 132/300 (44%), Gaps = 55/300 (18%)
Query: 314 KFSQKNFIGRGGFGLV---YKGILQDGTTVAVKKVIESDFQGDAEFCN----EVEIISNL 366
+++ ++IG G +G+V Y + + VA++K+ + Q +C E++I+
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNL--NKVRVAIRKISPFEHQT---YCQRTLREIKILLRF 82
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQR 426
+H N++ + + E+ + Y+V D M + L+ + + L+
Sbjct: 83 RHENIIGINDI-IRAPTIEQMKDVYIVQDLM-----ETDLY------KLLKTQHLSNDHI 130
Query: 427 KNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSH--L 484
+ + +GL Y+H + HRD+K +N+LL+ ++ DFGLA+ + H
Sbjct: 131 CYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 187
Query: 485 TTRVAGTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMC------GRKALD-----LST 532
T T Y APE L + KS D++S G ++ E++ G+ LD L
Sbjct: 188 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI 247
Query: 533 SGSPRA----CLIT----DWVWSLVKAGKV-WQALDP-----SLLKEDDFLSLNPKAIME 578
GSP C+I +++ SL KV W L P +L D L+ NP +E
Sbjct: 248 LGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIE 307
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 98/216 (45%), Gaps = 17/216 (7%)
Query: 315 FSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNL-KHRNLVP 373
F +G G +G VYKG +A KV++ + E E+ ++ HRN+
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIAT 85
Query: 374 LRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDV 433
G + + +LV ++ G+V D + G+ + + + + I ++
Sbjct: 86 YYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLI--KNTKGNTLKEEWIAY-----ICREI 138
Query: 434 AKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHG 493
+GL++LH + + HRDIK N+LL + ++ DFG++ Q T + GT
Sbjct: 139 LRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFI-GTPY 194
Query: 494 YLAPEYALYGQLTE-----KSDVYSFGVVILEIMCG 524
++APE + + KSD++S G+ +E+ G
Sbjct: 195 WMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 105/219 (47%), Gaps = 26/219 (11%)
Query: 313 DKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKV---IESDFQGDAEFCNEVEIISNLKH 368
+++ + +G G +G V + G VAVKK+ +S + E+ ++ ++KH
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKH 87
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAK-RPLTWPQRK 427
N++ L E ++ YLV HL + D + + K + LT +
Sbjct: 88 ENVIGLLDVFTPARSLEEFNDVYLV----------THLMGA--DLNNIVKCQKLTDDHVQ 135
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+I + +GL Y+H I HRD+K +N+ ++ D ++ DFGLA+ + + +T
Sbjct: 136 FLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTAD---EMTGY 189
Query: 488 VAGTHGYLAPEYAL-YGQLTEKSDVYSFGVVILEIMCGR 525
VA T Y APE L + + D++S G ++ E++ GR
Sbjct: 190 VA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 26/219 (11%)
Query: 313 DKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKV---IESDFQGDAEFCNEVEIISNLKH 368
+++ + +G G +G V + G VAVKK+ +S + E+ ++ ++KH
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKH 85
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAK-RPLTWPQRK 427
N++ L E ++ YLV HL + D + + K + LT +
Sbjct: 86 ENVIGLLDVFTPARSLEEFNDVYLV----------THLMGA--DLNNIVKCQKLTDDHVQ 133
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+I + +GL Y+H I HRD+K +N+ ++ D ++ DFGLA R +T
Sbjct: 134 FLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGY 187
Query: 488 VAGTHGYLAPEYAL-YGQLTEKSDVYSFGVVILEIMCGR 525
VA T Y APE L + + D++S G ++ E++ GR
Sbjct: 188 VA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 26/219 (11%)
Query: 313 DKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKV---IESDFQGDAEFCNEVEIISNLKH 368
+++ + +G G +G V + G VAVKK+ +S + E+ ++ ++KH
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKH 76
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAK-RPLTWPQRK 427
N++ L E ++ YLV HL + D + + K + LT +
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLV----------THLMGA--DLNNIVKCQKLTDDHVQ 124
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+I + +GL Y+H I HRD+K +N+ ++ D ++ DFGLA R +T
Sbjct: 125 FLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGY 178
Query: 488 VAGTHGYLAPEYAL-YGQLTEKSDVYSFGVVILEIMCGR 525
VA T Y APE L + + D++S G ++ E++ GR
Sbjct: 179 VA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 120/267 (44%), Gaps = 39/267 (14%)
Query: 314 KFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVI-ESDFQG-DAEFCNEVEIISNLKHRN 370
K+ + IG+G FG V+K + G VA+KKV+ E++ +G E++I+ LKH N
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 371 LVPLRGCCVVDGD--NERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL---TWPQ 425
+V L C N YLV+D+ + D +G+ L T +
Sbjct: 79 VVNLIEICRTKASPYNRCKGSIYLVFDFCEH------------DLAGLLSNVLVKFTLSE 126
Query: 426 RKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQ---SREGQS 482
K ++ + GL Y+H + I HRD+KA N+L+ D ++ADFGLA+ ++ Q
Sbjct: 127 IKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQP 183
Query: 483 HLTTRVAGTHGYLAPEYAL----YGQLTEKSDVYSFGVVILEIMCGRKALDLSTSGSPRA 538
+ T Y PE L YG D++ G ++ E+ + +T A
Sbjct: 184 NRYXNRVVTLWYRPPELLLGERDYG---PPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLA 240
Query: 539 CL------ITDWVWSLVKAGKVWQALD 559
+ IT VW V ++++ L+
Sbjct: 241 LISQLCGSITPEVWPNVDNYELYEKLE 267
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 26/219 (11%)
Query: 313 DKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKV---IESDFQGDAEFCNEVEIISNLKH 368
+++ + +G G +G V + G VAVKK+ +S + E+ ++ ++KH
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKH 80
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAK-RPLTWPQRK 427
N++ L E ++ YLV HL + D + + K + LT +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLV----------THLMGA--DLNNIVKCQKLTDDHVQ 128
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+I + +GL Y+H I HRD+K +N+ ++ D ++ DFGLA R +T
Sbjct: 129 FLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGY 182
Query: 488 VAGTHGYLAPEYAL-YGQLTEKSDVYSFGVVILEIMCGR 525
VA T Y APE L + + D++S G ++ E++ GR
Sbjct: 183 VA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 26/219 (11%)
Query: 313 DKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKV---IESDFQGDAEFCNEVEIISNLKH 368
+++ + +G G +G V + G VAVKK+ +S + E+ ++ ++KH
Sbjct: 19 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKH 77
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAK-RPLTWPQRK 427
N++ L E ++ YLV HL + D + + K + LT +
Sbjct: 78 ENVIGLLDVFTPARSLEEFNDVYLV----------THLMGA--DLNNIVKCQKLTDDHVQ 125
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+I + +GL Y+H I HRD+K +N+ ++ D ++ DFGLA R +T
Sbjct: 126 FLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGY 179
Query: 488 VAGTHGYLAPEYAL-YGQLTEKSDVYSFGVVILEIMCGR 525
VA T Y APE L + + D++S G ++ E++ GR
Sbjct: 180 VA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 105/219 (47%), Gaps = 26/219 (11%)
Query: 313 DKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKV---IESDFQGDAEFCNEVEIISNLKH 368
+++ + +G G +G V + G VAVKK+ +S + E+ ++ ++KH
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKH 87
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAK-RPLTWPQRK 427
N++ L E ++ YLV HL + D + + K + LT +
Sbjct: 88 ENVIGLLDVFTPARSLEEFNDVYLV----------THLMGA--DLNNIVKCQKLTDDHVQ 135
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+I + +GL Y+H I HRD+K +N+ ++ D ++ DFGLA+ + + +T
Sbjct: 136 FLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTAD---EMTGY 189
Query: 488 VAGTHGYLAPEYAL-YGQLTEKSDVYSFGVVILEIMCGR 525
VA T Y APE L + + D++S G ++ E++ GR
Sbjct: 190 VA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 26/219 (11%)
Query: 313 DKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKV---IESDFQGDAEFCNEVEIISNLKH 368
+++ + +G G +G V + G VAVKK+ +S + E+ ++ ++KH
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKH 82
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAK-RPLTWPQRK 427
N++ L E ++ YLV HL + D + + K + LT +
Sbjct: 83 ENVIGLLDVFTPARSLEEFNDVYLV----------THLMGA--DLNNIVKCQKLTDDHVQ 130
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+I + +GL Y+H I HRD+K +N+ ++ D ++ DFGLA R +T
Sbjct: 131 FLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLA---RHTDDEMTGY 184
Query: 488 VAGTHGYLAPEYAL-YGQLTEKSDVYSFGVVILEIMCGR 525
VA T Y APE L + + D++S G ++ E++ GR
Sbjct: 185 VA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 105/219 (47%), Gaps = 26/219 (11%)
Query: 313 DKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKV---IESDFQGDAEFCNEVEIISNLKH 368
+++ + +G G +G V + G VAVKK+ +S + E+ ++ ++KH
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKH 87
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAK-RPLTWPQRK 427
N++ L E ++ YLV HL + D + + K + LT +
Sbjct: 88 ENVIGLLDVFTPARSLEEFNDVYLV----------THLMGA--DLNNIVKCQKLTDDHVQ 135
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+I + +GL Y+H I HRD+K +N+ ++ D ++ DFGLA+ + + +T
Sbjct: 136 FLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTAD---EMTGY 189
Query: 488 VAGTHGYLAPEYAL-YGQLTEKSDVYSFGVVILEIMCGR 525
VA T Y APE L + + D++S G ++ E++ GR
Sbjct: 190 VA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 4/94 (4%)
Query: 432 DVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGT 491
++ GL +LH I +RD+K NILLD D ++ADFG+ K++ G + T GT
Sbjct: 126 EIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK-TNXFCGT 181
Query: 492 HGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGR 525
Y+APE L + D +SFGV++ E++ G+
Sbjct: 182 PDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 215
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 26/219 (11%)
Query: 313 DKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKV---IESDFQGDAEFCNEVEIISNLKH 368
+++ + +G G +G V + G VAVKK+ +S + E+ ++ ++KH
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKH 86
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAK-RPLTWPQRK 427
N++ L E ++ YLV HL + D + + K + LT +
Sbjct: 87 ENVIGLLDVFTPARSLEEFNDVYLV----------THLMGA--DLNNIVKCQKLTDDHVQ 134
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+I + +GL Y+H I HRD+K +N+ ++ D ++ DFGLA R +T
Sbjct: 135 FLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGY 188
Query: 488 VAGTHGYLAPEYAL-YGQLTEKSDVYSFGVVILEIMCGR 525
VA T Y APE L + + D++S G ++ E++ GR
Sbjct: 189 VA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 26/219 (11%)
Query: 313 DKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKV---IESDFQGDAEFCNEVEIISNLKH 368
+++ + +G G +G V + G VAVKK+ +S + E+ ++ ++KH
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKH 86
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAK-RPLTWPQRK 427
N++ L E ++ YLV HL + D + + K + LT +
Sbjct: 87 ENVIGLLDVFTPARSLEEFNDVYLV----------THLMGA--DLNNIVKCQKLTDDHVQ 134
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+I + +GL Y+H I HRD+K +N+ ++ D ++ DFGLA R +T
Sbjct: 135 FLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLA---RHTDDEMTGY 188
Query: 488 VAGTHGYLAPEYAL-YGQLTEKSDVYSFGVVILEIMCGR 525
VA T Y APE L + + D++S G ++ E++ GR
Sbjct: 189 VA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 26/219 (11%)
Query: 313 DKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKV---IESDFQGDAEFCNEVEIISNLKH 368
+++ + +G G +G V + G VAVKK+ +S + E+ ++ ++KH
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTY-RELRLLKHMKH 92
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAK-RPLTWPQRK 427
N++ L E ++ YLV HL + D + + K + LT +
Sbjct: 93 ENVIGLLDVFTPARSLEEFNDVYLV----------THLMGA--DLNNIVKCQKLTDDHVQ 140
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+I + +GL Y+H I HRD+K +N+ ++ D ++ DFGLA R +T
Sbjct: 141 FLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGY 194
Query: 488 VAGTHGYLAPEYAL-YGQLTEKSDVYSFGVVILEIMCGR 525
VA T Y APE L + + D++S G ++ E++ GR
Sbjct: 195 VA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 101/222 (45%), Gaps = 32/222 (14%)
Query: 312 TDKFSQKNFIGRGGFGLVYK------GILQDGTTVAVKKVIESDFQGDAEFCNEVEIISN 365
+D + K +G+G F +V + G+ + KK+ DFQ + E I
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQ---KLEREARICRK 84
Query: 366 LKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQ 425
L+H N+V L + S YLV+D + G + + + VA+ +
Sbjct: 85 LQHPNIVRLHDSI------QEESFHYLVFDLVTGGELFEDI---------VAREFYSEAD 129
Query: 426 RKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRA---RVADFGLAKQSREGQS 482
+ I + + +AY H I HR++K N+LL + + ++ADFGLA + + ++
Sbjct: 130 ASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA 186
Query: 483 HLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
AGT GYL+PE ++ D+++ GV++ ++ G
Sbjct: 187 --WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 26/219 (11%)
Query: 313 DKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKV---IESDFQGDAEFCNEVEIISNLKH 368
+++ + +G G +G V + G VAVKK+ +S + E+ ++ ++KH
Sbjct: 20 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKH 78
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAK-RPLTWPQRK 427
N++ L E ++ YLV HL + D + + K + LT +
Sbjct: 79 ENVIGLLDVFTPARSLEEFNDVYLV----------THLMGA--DLNNIVKCQKLTDDHVQ 126
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+I + +GL Y+H I HRD+K +N+ ++ D ++ DFGLA R +T
Sbjct: 127 FLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGY 180
Query: 488 VAGTHGYLAPEYAL-YGQLTEKSDVYSFGVVILEIMCGR 525
VA T Y APE L + + D++S G ++ E++ GR
Sbjct: 181 VA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 26/219 (11%)
Query: 313 DKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKV---IESDFQGDAEFCNEVEIISNLKH 368
+++ + +G G +G V + G VAVKK+ +S + E+ ++ ++KH
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKH 80
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAK-RPLTWPQRK 427
N++ L E ++ YLV HL + D + + K + LT +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLV----------THLMGA--DLNNIVKCQKLTDDHVQ 128
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+I + +GL Y+H I HRD+K +N+ ++ D ++ DFGLA R +T
Sbjct: 129 FLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGY 182
Query: 488 VAGTHGYLAPEYAL-YGQLTEKSDVYSFGVVILEIMCGR 525
VA T Y APE L + + D++S G ++ E++ GR
Sbjct: 183 VA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 26/219 (11%)
Query: 313 DKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKV---IESDFQGDAEFCNEVEIISNLKH 368
+++ + +G G +G V + G VAVKK+ +S + E+ ++ ++KH
Sbjct: 19 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKH 77
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAK-RPLTWPQRK 427
N++ L E ++ YLV HL + D + + K + LT +
Sbjct: 78 ENVIGLLDVFTPARSLEEFNDVYLV----------THLMGA--DLNNIVKCQKLTDDHVQ 125
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+I + +GL Y+H I HRD+K +N+ ++ D ++ DFGLA R +T
Sbjct: 126 FLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGY 179
Query: 488 VAGTHGYLAPEYAL-YGQLTEKSDVYSFGVVILEIMCGR 525
VA T Y APE L + + D++S G ++ E++ GR
Sbjct: 180 VA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 26/219 (11%)
Query: 313 DKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKV---IESDFQGDAEFCNEVEIISNLKH 368
+++ + +G G +G V + G VAVKK+ +S + E+ ++ ++KH
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKH 80
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAK-RPLTWPQRK 427
N++ L E ++ YLV HL + D + + K + LT +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLV----------THLMGA--DLNNIVKCQKLTDDHVQ 128
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+I + +GL Y+H I HRD+K +N+ ++ D ++ DFGLA R +T
Sbjct: 129 FLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGY 182
Query: 488 VAGTHGYLAPEYAL-YGQLTEKSDVYSFGVVILEIMCGR 525
VA T Y APE L + + D++S G ++ E++ GR
Sbjct: 183 VA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 26/219 (11%)
Query: 313 DKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKV---IESDFQGDAEFCNEVEIISNLKH 368
+++ + +G G +G V + G VAVKK+ +S + E+ ++ ++KH
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKH 80
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAK-RPLTWPQRK 427
N++ L E ++ YLV HL + D + + K + LT +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLV----------THLMGA--DLNNIVKCQKLTDDHVQ 128
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+I + +GL Y+H I HRD+K +N+ ++ D ++ DFGLA R +T
Sbjct: 129 FLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGY 182
Query: 488 VAGTHGYLAPEYAL-YGQLTEKSDVYSFGVVILEIMCGR 525
VA T Y APE L + + D++S G ++ E++ GR
Sbjct: 183 VA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 26/219 (11%)
Query: 313 DKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKV---IESDFQGDAEFCNEVEIISNLKH 368
+++ + +G G +G V + G VAVKK+ +S + E+ ++ ++KH
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKH 87
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAK-RPLTWPQRK 427
N++ L E ++ YLV HL + D + + K + LT +
Sbjct: 88 ENVIGLLDVFTPARSLEEFNDVYLV----------THLMGA--DLNNIVKCQKLTDDHVQ 135
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+I + +GL Y+H I HRD+K +N+ ++ D ++ DFGLA R +T
Sbjct: 136 FLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGY 189
Query: 488 VAGTHGYLAPEYAL-YGQLTEKSDVYSFGVVILEIMCGR 525
VA T Y APE L + + D++S G ++ E++ GR
Sbjct: 190 VA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 26/219 (11%)
Query: 313 DKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKV---IESDFQGDAEFCNEVEIISNLKH 368
+++ + +G G +G V + G VAVKK+ +S + E+ ++ ++KH
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKH 80
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAK-RPLTWPQRK 427
N++ L E ++ YLV HL + D + + K + LT +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLV----------THLMGA--DLNNIVKCQKLTDDHVQ 128
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+I + +GL Y+H I HRD+K +N+ ++ D ++ DFGLA R +T
Sbjct: 129 FLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGY 182
Query: 488 VAGTHGYLAPEYAL-YGQLTEKSDVYSFGVVILEIMCGR 525
VA T Y APE L + + D++S G ++ E++ GR
Sbjct: 183 VA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 26/210 (12%)
Query: 321 IGRGGFGLV---YKGILQDGTTVAVKKVIESDFQGDAEF---CNEVEIISNLKHRNLVPL 374
IG G G+V Y IL+ VA+KK + FQ E+ ++ + H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKK-LSRPFQNQTHAKRAYRELVLMKVVNHKNIIGL 88
Query: 375 RGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVA 434
E + Y+V + M + N+ S V + L + ++ +
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELM-DANL-----------SQVIQMELDHERMSYLLYQML 136
Query: 435 KGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGY 494
G+ +LH I HRD+K +NI++ +D ++ DFGLA+ + G S + T T Y
Sbjct: 137 VGIKHLHSA---GIIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVVTRYY 191
Query: 495 LAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
APE L E D++S GV++ E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 26/219 (11%)
Query: 313 DKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKV---IESDFQGDAEFCNEVEIISNLKH 368
+++ + +G G +G V + G VAVKK+ +S + E+ ++ ++KH
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKH 92
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAK-RPLTWPQRK 427
N++ L E ++ YLV HL + D + + K + LT +
Sbjct: 93 ENVIGLLDVFTPARSLEEFNDVYLV----------THLMGA--DLNNIVKCQKLTDDHVQ 140
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+I + +GL Y+H I HRD+K +N+ ++ D ++ DFGLA R +T
Sbjct: 141 FLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGY 194
Query: 488 VAGTHGYLAPEYAL-YGQLTEKSDVYSFGVVILEIMCGR 525
VA T Y APE L + + D++S G ++ E++ GR
Sbjct: 195 VA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 108/244 (44%), Gaps = 38/244 (15%)
Query: 296 PNTGSIWFKIQDLERATDKFSQKNFIGRGGFGLVYK----GILQDGT--TVAVKKVIESD 349
P S W E D+ + +GRG FG V + GI + T TVAVK + E
Sbjct: 16 PYDASKW------EFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGA 69
Query: 350 FQGDAE-FCNEVEIISNLKHR-NLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLF 407
+ +E++I+ ++ H N+V L G C + G ++ ++ GN+ +L
Sbjct: 70 THSEHRALMSELKILIHIGHHLNVVNLLGAC-----TKPGGPLMVIVEFCKFGNLSTYLR 124
Query: 408 PSFND---GSGVAKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADM 464
N+ + K LT VAKG+ +L HRD+ A NILL
Sbjct: 125 SKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKN 181
Query: 465 RARVADFGLAKQ-------SREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVV 517
++ DFGLA+ R+G + L + ++APE T +SDV+SFGV+
Sbjct: 182 VVKIXDFGLARDIYKDPDYVRKGDARLPLK------WMAPETIFDRVYTIQSDVWSFGVL 235
Query: 518 ILEI 521
+ EI
Sbjct: 236 LWEI 239
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 26/219 (11%)
Query: 313 DKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKV---IESDFQGDAEFCNEVEIISNLKH 368
+++ + +G G +G V + G VAVKK+ +S + E+ ++ ++KH
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKH 92
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAK-RPLTWPQRK 427
N++ L E ++ YLV HL + D + + K + LT +
Sbjct: 93 ENVIGLLDVFTPARSLEEFNDVYLV----------THLMGA--DLNNIVKCQKLTDDHVQ 140
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+I + +GL Y+H I HRD+K +N+ ++ D ++ DFGLA R +T
Sbjct: 141 FLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGY 194
Query: 488 VAGTHGYLAPEYAL-YGQLTEKSDVYSFGVVILEIMCGR 525
VA T Y APE L + + D++S G ++ E++ GR
Sbjct: 195 VA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 26/219 (11%)
Query: 313 DKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKV---IESDFQGDAEFCNEVEIISNLKH 368
+++ + +G G +G V + G VAVKK+ +S + E+ ++ ++KH
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKH 76
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAK-RPLTWPQRK 427
N++ L E ++ YLV HL + D + + K + LT +
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLV----------THLMGA--DLNNIVKCQKLTDDHVQ 124
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+I + +GL Y+H I HRD+K +N+ ++ D ++ DFGLA R +T
Sbjct: 125 FLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGY 178
Query: 488 VAGTHGYLAPEYAL-YGQLTEKSDVYSFGVVILEIMCGR 525
VA T Y APE L + + D++S G ++ E++ GR
Sbjct: 179 VA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 26/219 (11%)
Query: 313 DKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKV---IESDFQGDAEFCNEVEIISNLKH 368
+++ + +G G +G V + G VAVKK+ +S + E+ ++ ++KH
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKH 80
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAK-RPLTWPQRK 427
N++ L E ++ YLV HL + D + + K + LT +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLV----------THLMGA--DLNNIVKCQKLTDDHVQ 128
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+I + +GL Y+H I HRD+K +N+ ++ D ++ DFGLA R +T
Sbjct: 129 FLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGY 182
Query: 488 VAGTHGYLAPEYAL-YGQLTEKSDVYSFGVVILEIMCGR 525
VA T Y APE L + + D++S G ++ E++ GR
Sbjct: 183 VA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 26/210 (12%)
Query: 321 IGRGGFGLV---YKGILQDGTTVAVKKVIESDFQGDAEF---CNEVEIISNLKHRNLVPL 374
IG G G+V Y IL+ VA+KK + FQ E+ ++ + H+N++ L
Sbjct: 32 IGSGAQGIVVAAYDAILE--RNVAIKK-LSRPFQNQTHAKRAYRELVLMKVVNHKNIIGL 88
Query: 375 RGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVA 434
E + Y+V + M + N+ S V + L + ++ +
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELM-DANL-----------SQVIQMELDHERMSYLLYQML 136
Query: 435 KGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGY 494
G+ +LH I HRD+K +NI++ +D ++ DFGLA+ + G S + T T Y
Sbjct: 137 VGIKHLHSA---GIIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVVTRYY 191
Query: 495 LAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
APE L E D++S GV++ E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 26/219 (11%)
Query: 313 DKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKV---IESDFQGDAEFCNEVEIISNLKH 368
+++ + +G G +G V + G VAVKK+ +S + E+ ++ ++KH
Sbjct: 33 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKH 91
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAK-RPLTWPQRK 427
N++ L E ++ YLV HL + D + + K + LT +
Sbjct: 92 ENVIGLLDVFTPARSLEEFNDVYLV----------THLMGA--DLNNIVKCQKLTDDHVQ 139
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+I + +GL Y+H I HRD+K +N+ ++ D ++ DFGLA R +T
Sbjct: 140 FLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGY 193
Query: 488 VAGTHGYLAPEYAL-YGQLTEKSDVYSFGVVILEIMCGR 525
VA T Y APE L + + D++S G ++ E++ GR
Sbjct: 194 VA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 26/219 (11%)
Query: 313 DKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKV---IESDFQGDAEFCNEVEIISNLKH 368
+++ + +G G +G V + G VAVKK+ +S + E+ ++ ++KH
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKH 85
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAK-RPLTWPQRK 427
N++ L E ++ YLV HL + D + + K + LT +
Sbjct: 86 ENVIGLLDVFTPARSLEEFNDVYLV----------THLMGA--DLNNIVKCQKLTDDHVQ 133
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+I + +GL Y+H I HRD+K +N+ ++ D ++ DFGLA R +T
Sbjct: 134 FLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGY 187
Query: 488 VAGTHGYLAPEYAL-YGQLTEKSDVYSFGVVILEIMCGR 525
VA T Y APE L + + D++S G ++ E++ GR
Sbjct: 188 VA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 26/219 (11%)
Query: 313 DKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKV---IESDFQGDAEFCNEVEIISNLKH 368
+++ + +G G +G V + G VAVKK+ +S + E+ ++ ++KH
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKH 82
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAK-RPLTWPQRK 427
N++ L E ++ YLV HL + D + + K + LT +
Sbjct: 83 ENVIGLLDVFTPARSLEEFNDVYLV----------THLMGA--DLNNIVKCQKLTDDHVQ 130
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+I + +GL Y+H I HRD+K +N+ ++ D ++ DFGLA R +T
Sbjct: 131 FLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGY 184
Query: 488 VAGTHGYLAPEYAL-YGQLTEKSDVYSFGVVILEIMCGR 525
VA T Y APE L + + D++S G ++ E++ GR
Sbjct: 185 VA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 26/219 (11%)
Query: 313 DKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKV---IESDFQGDAEFCNEVEIISNLKH 368
+++ + +G G +G V + G VAVKK+ +S + E+ ++ ++KH
Sbjct: 21 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKH 79
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAK-RPLTWPQRK 427
N++ L E ++ YLV HL + D + + K + LT +
Sbjct: 80 ENVIGLLDVFTPARSLEEFNDVYLV----------THLMGA--DLNNIVKCQKLTDDHVQ 127
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+I + +GL Y+H I HRD+K +N+ ++ D ++ DFGLA R +T
Sbjct: 128 FLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGY 181
Query: 488 VAGTHGYLAPEYAL-YGQLTEKSDVYSFGVVILEIMCGR 525
VA T Y APE L + + D++S G ++ E++ GR
Sbjct: 182 VA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 26/219 (11%)
Query: 313 DKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKV---IESDFQGDAEFCNEVEIISNLKH 368
+++ + +G G +G V + G VAVKK+ +S + E+ ++ ++KH
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKH 82
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAK-RPLTWPQRK 427
N++ L E ++ YLV HL + D + + K + LT +
Sbjct: 83 ENVIGLLDVFTPARSLEEFNDVYLV----------THLMGA--DLNNIVKCQKLTDDHVQ 130
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+I + +GL Y+H I HRD+K +N+ ++ D ++ DFGLA R +T
Sbjct: 131 FLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGY 184
Query: 488 VAGTHGYLAPEYAL-YGQLTEKSDVYSFGVVILEIMCGR 525
VA T Y APE L + + D++S G ++ E++ GR
Sbjct: 185 VA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 100/213 (46%), Gaps = 30/213 (14%)
Query: 321 IGRGGFGLV---YKGILQDGTTVAVKKVIESDFQG---DAEFCNEVEIISNLKHRNLVPL 374
+G G +G V Y L+ VAVKK + FQ E+ ++ +LKH N++ L
Sbjct: 28 VGSGAYGSVCSAYDARLRQ--KVAVKK-LSRPFQSLIHARRTYRELRLLKHLKHENVIGL 84
Query: 375 RGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAK-RPLTWPQRKNIILDV 433
E SE YLV M D + + K + L+ + ++ +
Sbjct: 85 LDVFTPATSIEDFSEVYLVTTLMGA------------DLNNIVKCQALSDEHVQFLVYQL 132
Query: 434 AKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHG 493
+GL Y+H I HRD+K +N+ ++ D R+ DFGLA+Q+ E +T VA T
Sbjct: 133 LRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRILDFGLARQADE---EMTGYVA-TRW 185
Query: 494 YLAPEYAL-YGQLTEKSDVYSFGVVILEIMCGR 525
Y APE L + + D++S G ++ E++ G+
Sbjct: 186 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 26/219 (11%)
Query: 313 DKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKV---IESDFQGDAEFCNEVEIISNLKH 368
+++ + +G G +G V + G VAVKK+ +S + E+ ++ ++KH
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKH 80
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAK-RPLTWPQRK 427
N++ L E ++ YLV HL + D + + K + LT +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLV----------THLMGA--DLNNIVKXQKLTDDHVQ 128
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+I + +GL Y+H I HRD+K +N+ ++ D ++ DFGLA R +T
Sbjct: 129 FLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGY 182
Query: 488 VAGTHGYLAPEYAL-YGQLTEKSDVYSFGVVILEIMCGR 525
VA T Y APE L + + D++S G ++ E++ GR
Sbjct: 183 VA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 101/222 (45%), Gaps = 32/222 (14%)
Query: 312 TDKFSQKNFIGRGGFGLVYKGILQD---GTTVAVKKVIESDFQGDAE---FCNEVEIISN 365
+D++ + +G+G FG V + +D G AVK + + + + EV+++
Sbjct: 25 SDRYKGQRVLGKGSFGEVI--LCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQ 82
Query: 366 LKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQ 425
L H N+ L E YLV + G + D + ++++ +
Sbjct: 83 LDHPNIXKLYEFF------EDKGYFYLVGEVYTGGELFDEI---------ISRKRFSEVD 127
Query: 426 RKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDA---DMRARVADFGLAKQSREGQS 482
II V G+ Y H K I HRD+K N+LL++ D R+ DFGL+ E
Sbjct: 128 AARIIRQVLSGITYXH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-EASK 183
Query: 483 HLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
++ GT Y+APE L+G EK DV+S GV++ ++ G
Sbjct: 184 KXKDKI-GTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 26/219 (11%)
Query: 313 DKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKV---IESDFQGDAEFCNEVEIISNLKH 368
+++ + +G G +G V + G VAVKK+ +S + E+ ++ ++KH
Sbjct: 45 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKH 103
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAK-RPLTWPQRK 427
N++ L E ++ YLV HL + D + + K + LT +
Sbjct: 104 ENVIGLLDVFTPARSLEEFNDVYLV----------THLMGA--DLNNIVKCQKLTDDHVQ 151
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+I + +GL Y+H I HRD+K +N+ ++ D ++ DFGLA R +T
Sbjct: 152 FLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGY 205
Query: 488 VAGTHGYLAPEYAL-YGQLTEKSDVYSFGVVILEIMCGR 525
VA T Y APE L + + D++S G ++ E++ GR
Sbjct: 206 VA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 100/213 (46%), Gaps = 30/213 (14%)
Query: 321 IGRGGFGLV---YKGILQDGTTVAVKKVIESDFQG---DAEFCNEVEIISNLKHRNLVPL 374
+G G +G V Y L+ VAVKK + FQ E+ ++ +LKH N++ L
Sbjct: 36 VGSGAYGSVCSAYDARLRQ--KVAVKK-LSRPFQSLIHARRTYRELRLLKHLKHENVIGL 92
Query: 375 RGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAK-RPLTWPQRKNIILDV 433
E SE YLV M D + + K + L+ + ++ +
Sbjct: 93 LDVFTPATSIEDFSEVYLVTTLMGA------------DLNNIVKCQALSDEHVQFLVYQL 140
Query: 434 AKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHG 493
+GL Y+H I HRD+K +N+ ++ D R+ DFGLA+Q+ E +T VA T
Sbjct: 141 LRGLKYIHSA---GIIHRDLKPSNVAVNEDSELRILDFGLARQADE---EMTGYVA-TRW 193
Query: 494 YLAPEYAL-YGQLTEKSDVYSFGVVILEIMCGR 525
Y APE L + + D++S G ++ E++ G+
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 100/218 (45%), Gaps = 24/218 (11%)
Query: 313 DKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKV---IESDFQGDAEFCNEVEIISNLKH 368
+++ + +G G +G V + G VAVKK+ +S + E+ ++ ++KH
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKH 76
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKN 428
N++ L E ++ YLV M N+ AK LT +
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLVTHLMG---------ADLNNIVKCAK--LTDDHVQF 125
Query: 429 IILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRV 488
+I + +GL Y+H I HRD+K +N+ ++ D ++ DFGLA R +T V
Sbjct: 126 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYV 179
Query: 489 AGTHGYLAPEYAL-YGQLTEKSDVYSFGVVILEIMCGR 525
A T Y APE L + + D++S G ++ E++ GR
Sbjct: 180 A-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 105/219 (47%), Gaps = 26/219 (11%)
Query: 313 DKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKV---IESDFQGDAEFCNEVEIISNLKH 368
+++ + +G G +G V + G VAVKK+ +S + E+ ++ ++KH
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKH 100
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAK-RPLTWPQRK 427
N++ L E ++ YLV HL + D + + K + LT +
Sbjct: 101 ENVIGLLDVFTPARSLEEFNDVYLV----------THLMGA--DLNNIVKCQKLTDDHVQ 148
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+I + +GL Y+H I HRD+K +N+ ++ D ++ DFGLA+ + + +T
Sbjct: 149 FLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGY 202
Query: 488 VAGTHGYLAPEYAL-YGQLTEKSDVYSFGVVILEIMCGR 525
VA T Y APE L + + D++S G ++ E++ GR
Sbjct: 203 VA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 101/221 (45%), Gaps = 26/221 (11%)
Query: 309 ERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDA--EFCNEVEIISNL 366
E D F + + +G G G+V+K + V +K+I + + + E++++
Sbjct: 64 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 123
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQR 426
+V G DG E + ++M G++D V K+ P++
Sbjct: 124 NSPYIVGFYGAFYSDG------EISICMEHMDGGSLDQ-----------VLKKAGRIPEQ 166
Query: 427 --KNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHL 484
+ + V KGL YL K I HRD+K +NIL+++ ++ DFG++ Q + +
Sbjct: 167 ILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---M 221
Query: 485 TTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGR 525
GT Y++PE + +SD++S G+ ++E+ GR
Sbjct: 222 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 262
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 102/224 (45%), Gaps = 27/224 (12%)
Query: 314 KFSQKNFI---GRGGFGLVYKGILQDGTTVAVKKVIESD--FQGDAEFCNEVE--IISNL 366
K + NF+ G+G FG V + + K+++ D Q D C VE +++ L
Sbjct: 17 KLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALL 76
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQR 426
+ C D Y V +Y+ G++ H+ V K PQ
Sbjct: 77 DKPPFLTQLHSCFQTVDR-----LYFVMEYVNGGDLMYHI-------QQVGK--FKEPQA 122
Query: 427 KNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTT 486
+++ GL +LH K I +RD+K N++LD++ ++ADFG+ K+ +TT
Sbjct: 123 VFYAAEISIGLFFLH---KRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHM--MDGVTT 177
Query: 487 R-VAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALD 529
R GT Y+APE Y + D +++GV++ E++ G+ D
Sbjct: 178 REFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 26/219 (11%)
Query: 313 DKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKV---IESDFQGDAEFCNEVEIISNLKH 368
+++ + +G G +G V + G VAVKK+ +S + E+ ++ ++KH
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKH 80
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAK-RPLTWPQRK 427
N++ L E ++ YLV HL + D + + K + LT +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLV----------THLMGA--DLNNIVKCQKLTDDHVQ 128
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+I + +GL Y+H I HRD+K +N+ ++ D ++ DFGLA R +T
Sbjct: 129 FLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGY 182
Query: 488 VAGTHGYLAPEYAL-YGQLTEKSDVYSFGVVILEIMCGR 525
VA T Y APE L + + D++S G ++ E++ GR
Sbjct: 183 VA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 102/219 (46%), Gaps = 26/219 (11%)
Query: 313 DKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKV---IESDFQGDAEFCNEVEIISNLKH 368
+++ + +G G +G V + G VAVKK+ +S + E+ ++ ++KH
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKH 86
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAK-RPLTWPQRK 427
N++ L E ++ YLV HL + D + + K + LT +
Sbjct: 87 ENVIGLLDVFTPARSLEEFNDVYLV----------THLMGA--DLNNIVKCQKLTDDHVQ 134
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+I + +GL Y+H I HRD+K +N+ ++ D ++ DFGLA+ + + T
Sbjct: 135 FLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTG 187
Query: 488 VAGTHGYLAPEYAL-YGQLTEKSDVYSFGVVILEIMCGR 525
T Y APE L + + D++S G ++ E++ GR
Sbjct: 188 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 26/219 (11%)
Query: 313 DKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKV---IESDFQGDAEFCNEVEIISNLKH 368
+++ + +G G +G V + G VAVKK+ +S + E+ ++ ++KH
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKH 80
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAK-RPLTWPQRK 427
N++ L E ++ YLV HL + D + + K + LT +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLV----------THLMGA--DLNNIVKCQKLTDDHVQ 128
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+I + +GL Y+H I HRD+K +N+ ++ D ++ DFGLA R +T
Sbjct: 129 FLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGY 182
Query: 488 VAGTHGYLAPEYAL-YGQLTEKSDVYSFGVVILEIMCGR 525
VA T Y APE L + + D++S G ++ E++ GR
Sbjct: 183 VA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 107/248 (43%), Gaps = 42/248 (16%)
Query: 296 PNTGSIWFKIQDLERATDKFSQKNFIGRGGFGLVYK----GILQDGT--TVAVKKVIESD 349
P S W E D+ +GRG FG V + GI + T TVAVK + E
Sbjct: 18 PYDASKW------EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA 71
Query: 350 FQGDAE-FCNEVEIISNLKHR-NLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLF 407
+ +E++I+ ++ H N+V L G C + G ++ ++ GN+ +L
Sbjct: 72 THSEHRALMSELKILIHIGHHLNVVNLLGAC-----TKPGGPLMVIVEFCKFGNLSTYLR 126
Query: 408 PSFNDGSGVAKRP-------LTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILL 460
N+ + P LT VAKG+ +L HRD+ A NILL
Sbjct: 127 SKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILL 183
Query: 461 DADMRARVADFGLAKQ-------SREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYS 513
++ DFGLA+ R+G + L + ++APE T +SDV+S
Sbjct: 184 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK------WMAPETIFDRVYTIQSDVWS 237
Query: 514 FGVVILEI 521
FGV++ EI
Sbjct: 238 FGVLLWEI 245
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 101/210 (48%), Gaps = 24/210 (11%)
Query: 321 IGRGGFGLVYKGIL-QDGTTVAVKKVIESDFQGD---AEFCNEVEIISNLKHRNLVPLRG 376
+G G +G V + + G VA+KK+ FQ + E+ ++ +++H N++ L
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRP-FQSELFAKRAYRELRLLKHMRHENVIGLLD 91
Query: 377 CCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKG 436
D + ++ YLV MP F + G + L + + ++ + KG
Sbjct: 92 VFTPDETLDDFTDFYLV---MP--------FMGTDLGKLMKHEKLGEDRIQFLVYQMLKG 140
Query: 437 LAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGYLA 496
L Y+H I HRD+K N+ ++ D ++ DFGLA+Q+ S + V T Y A
Sbjct: 141 LRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQA---DSEMXGXVV-TRWYRA 193
Query: 497 PEYAL-YGQLTEKSDVYSFGVVILEIMCGR 525
PE L + + T+ D++S G ++ E++ G+
Sbjct: 194 PEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 26/219 (11%)
Query: 313 DKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKV---IESDFQGDAEFCNEVEIISNLKH 368
+++ + +G G +G V + G VAVKK+ +S + E+ ++ ++KH
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKH 82
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAK-RPLTWPQRK 427
N++ L E ++ YLV HL + D + + K + LT +
Sbjct: 83 ENVIGLLDVFTPARSLEEFNDVYLV----------THLMGA--DLNNIVKCQKLTDDHVQ 130
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+I + +GL Y+H I HRD+K +N+ ++ D ++ DFGLA R +T
Sbjct: 131 FLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGY 184
Query: 488 VAGTHGYLAPEYAL-YGQLTEKSDVYSFGVVILEIMCGR 525
VA T Y APE L + + D++S G ++ E++ GR
Sbjct: 185 VA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 108/244 (44%), Gaps = 38/244 (15%)
Query: 296 PNTGSIWFKIQDLERATDKFSQKNFIGRGGFGLVYK----GILQDGT--TVAVKKVIESD 349
P S W E D+ + +GRG FG V + GI + T TVAVK + E
Sbjct: 16 PYDASKW------EFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGA 69
Query: 350 FQGDAE-FCNEVEIISNLKHR-NLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLF 407
+ +E++I+ ++ H N+V L G C + G ++ ++ GN+ +L
Sbjct: 70 THSEHRALMSELKILIHIGHHLNVVNLLGAC-----TKPGGPLMVIVEFCKFGNLSTYLR 124
Query: 408 PSFND---GSGVAKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADM 464
N+ + K LT VAKG+ +L HRD+ A NILL
Sbjct: 125 SKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKN 181
Query: 465 RARVADFGLAKQ-------SREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVV 517
++ DFGLA+ R+G + L + ++APE T +SDV+SFGV+
Sbjct: 182 VVKICDFGLARDIYKDPDYVRKGDARLPLK------WMAPETIFDRVYTIQSDVWSFGVL 235
Query: 518 ILEI 521
+ EI
Sbjct: 236 LWEI 239
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 26/219 (11%)
Query: 313 DKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKV---IESDFQGDAEFCNEVEIISNLKH 368
+++ + +G G +G V + G VAVKK+ +S + E+ ++ ++KH
Sbjct: 41 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKH 99
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAK-RPLTWPQRK 427
N++ L E ++ YLV HL + D + + K + LT +
Sbjct: 100 ENVIGLLDVFTPARSLEEFNDVYLV----------THLMGA--DLNNIVKCQKLTDDHVQ 147
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+I + +GL Y+H I HRD+K +N+ ++ D ++ DFGLA R +T
Sbjct: 148 FLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGY 201
Query: 488 VAGTHGYLAPEYAL-YGQLTEKSDVYSFGVVILEIMCGR 525
VA T Y APE L + + D++S G ++ E++ GR
Sbjct: 202 VA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 107/246 (43%), Gaps = 40/246 (16%)
Query: 296 PNTGSIWFKIQDLERATDKFSQKNFIGRGGFGLVYK----GILQDGT--TVAVKKVIESD 349
P S W E D+ +GRG FG V + GI + T TVAVK + E
Sbjct: 18 PYDASKW------EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGA 71
Query: 350 FQGDAE-FCNEVEIISNLKHR-NLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLF 407
+ +E++I+ ++ H N+V L G C + G ++ ++ GN+ +L
Sbjct: 72 THSEHRALMSELKILIHIGHHLNVVNLLGAC-----TKPGGPLMVIVEFCKFGNLSTYLR 126
Query: 408 PSFND-----GSGVAKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDA 462
N+ + K LT VAKG+ +L HRD+ A NILL
Sbjct: 127 SKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSE 183
Query: 463 DMRARVADFGLAKQ-------SREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFG 515
++ DFGLA+ R+G + L + ++APE T +SDV+SFG
Sbjct: 184 KNVVKICDFGLARDIXKDPDXVRKGDARLPLK------WMAPETIFDRVYTIQSDVWSFG 237
Query: 516 VVILEI 521
V++ EI
Sbjct: 238 VLLWEI 243
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 105/219 (47%), Gaps = 26/219 (11%)
Query: 313 DKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKV---IESDFQGDAEFCNEVEIISNLKH 368
+++ + +G G +G V + G VAVKK+ +S + E+ ++ ++KH
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKH 100
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAK-RPLTWPQRK 427
N++ L E ++ YLV HL + D + + K + LT +
Sbjct: 101 ENVIGLLDVFTPARSLEEFNDVYLV----------THLMGA--DLNNIVKCQKLTDDHVQ 148
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+I + +GL Y+H I HRD+K +N+ ++ D ++ DFGLA+ + + +T
Sbjct: 149 FLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGY 202
Query: 488 VAGTHGYLAPEYAL-YGQLTEKSDVYSFGVVILEIMCGR 525
VA T Y APE L + + D++S G ++ E++ GR
Sbjct: 203 VA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 102/219 (46%), Gaps = 26/219 (11%)
Query: 313 DKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKV---IESDFQGDAEFCNEVEIISNLKH 368
+++ + +G G +G V + G VAVKK+ +S + E+ ++ ++KH
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKH 86
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAK-RPLTWPQRK 427
N++ L E ++ YLV HL + D + + K + LT +
Sbjct: 87 ENVIGLLDVFTPARSLEEFNDVYLV----------THLMGA--DLNNIVKCQKLTDDHVQ 134
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+I + +GL Y+H I HRD+K +N+ ++ D ++ DFGLA+ + + T
Sbjct: 135 FLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTG 187
Query: 488 VAGTHGYLAPEYAL-YGQLTEKSDVYSFGVVILEIMCGR 525
T Y APE L + + D++S G ++ E++ GR
Sbjct: 188 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 105/219 (47%), Gaps = 26/219 (11%)
Query: 313 DKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKV---IESDFQGDAEFCNEVEIISNLKH 368
+++ + +G G +G V + G VAVKK+ +S + E+ ++ ++KH
Sbjct: 41 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKH 99
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAK-RPLTWPQRK 427
N++ L E ++ YLV HL + D + + K + LT +
Sbjct: 100 ENVIGLLDVFTPARSLEEFNDVYLV----------THLMGA--DLNNIVKCQKLTDDHVQ 147
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+I + +GL Y+H I HRD+K +N+ ++ D ++ DFGLA+ + + +T
Sbjct: 148 FLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGY 201
Query: 488 VAGTHGYLAPEYAL-YGQLTEKSDVYSFGVVILEIMCGR 525
VA T Y APE L + + D++S G ++ E++ GR
Sbjct: 202 VA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 101/221 (45%), Gaps = 26/221 (11%)
Query: 309 ERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDA--EFCNEVEIISNL 366
E D F + + +G G G+V+K + V +K+I + + + E++++
Sbjct: 29 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 88
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQR 426
+V G DG E + ++M G++D V K+ P++
Sbjct: 89 NSPYIVGFYGAFYSDG------EISICMEHMDGGSLDQ-----------VLKKAGRIPEQ 131
Query: 427 --KNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHL 484
+ + V KGL YL K I HRD+K +NIL+++ ++ DFG++ Q + +
Sbjct: 132 ILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---M 186
Query: 485 TTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGR 525
GT Y++PE + +SD++S G+ ++E+ GR
Sbjct: 187 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 227
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 131/300 (43%), Gaps = 55/300 (18%)
Query: 314 KFSQKNFIGRGGFGLV---YKGILQDGTTVAVKKVIESDFQGDAEFCN----EVEIISNL 366
+++ ++IG G +G+V Y + + VA+KK+ + Q +C E++I+
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQT---YCQRTLREIKILLRF 82
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQR 426
+H N++ + + E+ + Y+V D M + L+ + + L+
Sbjct: 83 RHENIIGINDI-IRAPTIEQMKDVYIVQDLM-----ETDLY------KLLKTQHLSNDHI 130
Query: 427 KNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSH--L 484
+ + +GL Y+H + HRD+K +N+LL+ ++ DFGLA+ + H
Sbjct: 131 CYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 187
Query: 485 TTRVAGTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMC------GRKALD-----LST 532
T Y APE L + KS D++S G ++ E++ G+ LD L
Sbjct: 188 LXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI 247
Query: 533 SGSPRA----CLIT----DWVWSLVKAGKV-WQALDP-----SLLKEDDFLSLNPKAIME 578
GSP C+I +++ SL KV W L P +L D L+ NP +E
Sbjct: 248 LGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIE 307
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 131/300 (43%), Gaps = 55/300 (18%)
Query: 314 KFSQKNFIGRGGFGLV---YKGILQDGTTVAVKKVIESDFQGDAEFCN----EVEIISNL 366
+++ ++IG G +G+V Y + + VA+KK+ + Q +C E++I+
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQT---YCQRTLREIKILLRF 83
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQR 426
+H N++ + + E+ + Y+V D M + L+ + + L+
Sbjct: 84 RHENIIGINDI-IRAPTIEQMKDVYIVQDLM-----ETDLY------KLLKTQHLSNDHI 131
Query: 427 KNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSH--L 484
+ + +GL Y+H + HRD+K +N+LL+ ++ DFGLA+ + H
Sbjct: 132 CYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 188
Query: 485 TTRVAGTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMC------GRKALD-----LST 532
T Y APE L + KS D++S G ++ E++ G+ LD L
Sbjct: 189 LXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI 248
Query: 533 SGSPRA----CLIT----DWVWSLVKAGKV-WQALDP-----SLLKEDDFLSLNPKAIME 578
GSP C+I +++ SL KV W L P +L D L+ NP +E
Sbjct: 249 LGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIE 308
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 102/219 (46%), Gaps = 26/219 (11%)
Query: 313 DKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKV---IESDFQGDAEFCNEVEIISNLKH 368
+++ + +G G +G V + G VAVKK+ +S + E+ ++ ++KH
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKH 80
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAK-RPLTWPQRK 427
N++ L E ++ YLV HL + D + + K + LT +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLV----------THLMGA--DLNNIVKCQKLTDDHVQ 128
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+I + +GL Y+H I HRD+K +N+ ++ D ++ DFGLA R +T
Sbjct: 129 FLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGY 182
Query: 488 VAGTHGYLAPEYALYG-QLTEKSDVYSFGVVILEIMCGR 525
VA T Y APE L + D++S G ++ E++ GR
Sbjct: 183 VA-TRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 108/225 (48%), Gaps = 32/225 (14%)
Query: 321 IGRGGFGLVYK----GILQDGTT--VAVKKVIESDFQGDAE-FCNEVEIISNL-KHRNLV 372
+G G FG V GI + G + VAVK + E + E +E+++++ L H N+V
Sbjct: 53 LGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIV 112
Query: 373 PLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFP-----SFNDGSGVAKRPLTWPQRK 427
L G C + G YL+++Y G++ ++L S ++ ++ L +
Sbjct: 113 NLLGACTLSGP------IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDL 166
Query: 428 NII---------LDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSR 478
N++ VAKG+ +L + + HRD+ A N+L+ ++ DFGLA+
Sbjct: 167 NVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLARDIM 223
Query: 479 EGQSHLTTRVAGTH-GYLAPEYALYGQLTEKSDVYSFGVVILEIM 522
+++ A ++APE G T KSDV+S+G+++ EI
Sbjct: 224 SDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIF 268
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 107/238 (44%), Gaps = 34/238 (14%)
Query: 313 DKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNL 371
D+ + +G+G +G+VY G L + +A+K++ E D + E+ + +LKH+N+
Sbjct: 22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNI 81
Query: 372 VPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKN--- 428
V G +G + + + +P G++ L R P + N
Sbjct: 82 VQYLGSFSENGFIK------IFMEQVPGGSLSALL------------RSKWGPLKDNEQT 123
Query: 429 ---IILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRA-RVADFGLAKQSREGQSHL 484
+ +GL YLH I HRDIK N+L++ +++DFG +K+ G +
Sbjct: 124 IGFYTKQILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKR-LAGINPC 179
Query: 485 TTRVAGTHGYLAPEYALYGQ--LTEKSDVYSFGVVILEIMCGRKALDLSTSGSPRACL 540
T GT Y+APE G + +D++S G I+E+ G+ G P+A +
Sbjct: 180 TETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPP--FYELGEPQAAM 235
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 26/211 (12%)
Query: 321 IGRGGFGLVYKGI-LQDGTTVAVKKV---IESDFQGDAEFCNEVEIISNLKHRNLVPLRG 376
+G G +G V + G VAVKK+ +S + E+ ++ ++KH N++ L
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 98
Query: 377 CCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAK-RPLTWPQRKNIILDVAK 435
E ++ YLV HL + D + + K + LT + +I + +
Sbjct: 99 VFTPARSLEEFNDVYLV----------THLMGA--DLNNIVKCQKLTDDHVQFLIYQILR 146
Query: 436 GLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGYL 495
GL Y+H I HRD+K +N+ ++ D ++ DFGLA R +T VA T Y
Sbjct: 147 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVA-TRWYR 199
Query: 496 APEYAL-YGQLTEKSDVYSFGVVILEIMCGR 525
APE L + + D++S G ++ E++ GR
Sbjct: 200 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 106/230 (46%), Gaps = 28/230 (12%)
Query: 302 WFKIQDLERATDKFSQKNFIGRGGFGLVYK-GILQDGTTVAVKKVIESDFQ---GDAEFC 357
W + Q + + T F Q +G+GGFG V + G A KK+ + + G+A
Sbjct: 175 WLERQPVTKNT--FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMAL 232
Query: 358 NEVEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVA 417
NE +I+ + R +V L E LV M G++ H++ G
Sbjct: 233 NEKQILEKVNSRFVVSLAYA------YETKDALCLVLTLMNGGDLKFHIYHMGQAG---- 282
Query: 418 KRPLTWPQRKNIIL--DVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAK 475
+P+ + + ++ GL LH + I +RD+K NILLD R++D GLA
Sbjct: 283 -----FPEARAVFYAAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAV 334
Query: 476 QSREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGR 525
EGQ+ + RV GT GY+APE + T D ++ G ++ E++ G+
Sbjct: 335 HVPEGQT-IKGRV-GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 107/247 (43%), Gaps = 42/247 (17%)
Query: 321 IGRGGFGLVYKGILQ------DGTTVAVKKVIE-SDFQGDAEFCNEVEIISNLKHRNLVP 373
+G G FG VY+G + VAVK + E Q + +F E IIS L H+N+V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 374 LRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLF---PSFNDGSGVAKRPLTWPQRKNII 430
C+ G + + R+++ + M G++ L P + S +A L ++
Sbjct: 99 ----CI--GVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLL-----HVA 147
Query: 431 LDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVA---DFGLAKQSREGQSHLTTR 487
D+A G YL HRDI A N LL RVA DFG+A+ +
Sbjct: 148 RDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGG 204
Query: 488 VAGTH-GYLAPEYALYGQLTEKSDVYSFGVVILEIM----------CGRKALDLSTSGS- 535
A ++ PE + G T K+D +SFGV++ EI ++ L+ TSG
Sbjct: 205 CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGR 264
Query: 536 ---PRAC 539
P+ C
Sbjct: 265 MDPPKNC 271
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 102/219 (46%), Gaps = 26/219 (11%)
Query: 313 DKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKV---IESDFQGDAEFCNEVEIISNLKH 368
+++ + +G G +G V + G VAVKK+ +S + E+ ++ ++KH
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKH 76
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAK-RPLTWPQRK 427
N++ L E ++ YLV HL + D + + K + LT +
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLV----------THLMGA--DLNNIVKCQKLTDDHVQ 124
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+I + +GL Y+H I HRD+K +N+ ++ D ++ DFGLA+ + + +
Sbjct: 125 FLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFV-- 179
Query: 488 VAGTHGYLAPEYAL-YGQLTEKSDVYSFGVVILEIMCGR 525
T Y APE L + + D++S G ++ E++ GR
Sbjct: 180 --ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 107/238 (44%), Gaps = 34/238 (14%)
Query: 313 DKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNL 371
D+ + +G+G +G+VY G L + +A+K++ E D + E+ + +LKH+N+
Sbjct: 8 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNI 67
Query: 372 VPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKN--- 428
V G +G + + + +P G++ L R P + N
Sbjct: 68 VQYLGSFSENGFIK------IFMEQVPGGSLSALL------------RSKWGPLKDNEQT 109
Query: 429 ---IILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRA-RVADFGLAKQSREGQSHL 484
+ +GL YLH I HRDIK N+L++ +++DFG +K+ G +
Sbjct: 110 IGFYTKQILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKR-LAGINPC 165
Query: 485 TTRVAGTHGYLAPEYALYGQ--LTEKSDVYSFGVVILEIMCGRKALDLSTSGSPRACL 540
T GT Y+APE G + +D++S G I+E+ G+ G P+A +
Sbjct: 166 TETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPP--FYELGEPQAAM 221
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 108/247 (43%), Gaps = 42/247 (17%)
Query: 321 IGRGGFGLVYKGILQ------DGTTVAVKKVIE-SDFQGDAEFCNEVEIISNLKHRNLVP 373
+G G FG VY+G + VAVK + E Q + +F E IIS L H+N+V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 374 LRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLF---PSFNDGSGVAKRPLTWPQRKNII 430
C+ G + + R+++ + M G++ L P + S +A L ++
Sbjct: 113 ----CI--GVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLL-----HVA 161
Query: 431 LDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVA---DFGLAKQSREGQSHLTTR 487
D+A G YL + HRDI A N LL RVA DFG+A+ +
Sbjct: 162 RDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGG 218
Query: 488 VAGTH-GYLAPEYALYGQLTEKSDVYSFGVVILEIM----------CGRKALDLSTSGS- 535
A ++ PE + G T K+D +SFGV++ EI ++ L+ TSG
Sbjct: 219 CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGR 278
Query: 536 ---PRAC 539
P+ C
Sbjct: 279 MDPPKNC 285
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 131/300 (43%), Gaps = 55/300 (18%)
Query: 314 KFSQKNFIGRGGFGLV---YKGILQDGTTVAVKKVIESDFQGDAEFCN----EVEIISNL 366
+++ ++IG G +G+V Y + + VA+KK+ + Q +C E++I+
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQT---YCQRTLREIKILLAF 80
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQR 426
+H N++ + + E+ + Y+V D M + L+ + + L+
Sbjct: 81 RHENIIGINDI-IRAPTIEQMKDVYIVQDLM-----ETDLY------KLLKTQHLSNDHI 128
Query: 427 KNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSH--L 484
+ + +GL Y+H + HRD+K +N+LL+ ++ DFGLA+ + H
Sbjct: 129 CYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGF 185
Query: 485 TTRVAGTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMC------GRKALD-----LST 532
T T Y APE L + KS D++S G ++ E++ G+ LD L
Sbjct: 186 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI 245
Query: 533 SGSPRA----CLIT----DWVWSLVKAGKV-WQALDP-----SLLKEDDFLSLNPKAIME 578
GSP C I +++ SL KV W L P +L D L+ NP +E
Sbjct: 246 LGSPSQEDLNCGINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIE 305
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 96/215 (44%), Gaps = 28/215 (13%)
Query: 321 IGRGGFGLVY--KGILQDGTTVAVKKVIESDFQGDA--EFCNEVEIISNLKHRNLVPLRG 376
IG+G F V + IL G VA+K + ++ + + EV I+ L H N+V L
Sbjct: 23 IGKGNFAKVKLARHILT-GREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFE 81
Query: 377 CCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKG 436
E YL+ +Y G V D+L VA + + ++ +
Sbjct: 82 VI------ETEKTLYLIMEYASGGEVFDYL---------VAHGRMKEKEARSKFRQIVSA 126
Query: 437 LAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGYLA 496
+ Y H + I HRD+KA N+LLDADM ++ADFG + + G G Y A
Sbjct: 127 VQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK--LDAFCGAPPYAA 181
Query: 497 PEYALYGQLTE--KSDVYSFGVVILEIMCGRKALD 529
PE G+ + + DV+S GV++ ++ G D
Sbjct: 182 PEL-FQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 106/230 (46%), Gaps = 28/230 (12%)
Query: 302 WFKIQDLERATDKFSQKNFIGRGGFGLVYK-GILQDGTTVAVKKVIESDFQ---GDAEFC 357
W + Q + + T F Q +G+GGFG V + G A KK+ + + G+A
Sbjct: 175 WLERQPVTKNT--FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMAL 232
Query: 358 NEVEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVA 417
NE +I+ + R +V L E LV M G++ H++ G
Sbjct: 233 NEKQILEKVNSRFVVSLAYA------YETKDALCLVLTLMNGGDLKFHIYHMGQAG---- 282
Query: 418 KRPLTWPQRKNIIL--DVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAK 475
+P+ + + ++ GL LH + I +RD+K NILLD R++D GLA
Sbjct: 283 -----FPEARAVFYAAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAV 334
Query: 476 QSREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGR 525
EGQ+ + RV GT GY+APE + T D ++ G ++ E++ G+
Sbjct: 335 HVPEGQT-IKGRV-GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 103/219 (47%), Gaps = 26/219 (11%)
Query: 313 DKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKV---IESDFQGDAEFCNEVEIISNLKH 368
+++ + +G G +G V ++ G +AVKK+ +S + E+ ++ ++KH
Sbjct: 51 ERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTY-RELRLLKHMKH 109
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAK-RPLTWPQRK 427
N++ L E ++ YLV HL + D + + K + LT +
Sbjct: 110 ENVIGLLDVFTPATSLEEFNDVYLV----------THLMGA--DLNNIVKCQKLTDDHVQ 157
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+I + +GL Y+H I HRD+K +N+ ++ D ++ DFGLA R +T
Sbjct: 158 FLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGY 211
Query: 488 VAGTHGYLAPEYAL-YGQLTEKSDVYSFGVVILEIMCGR 525
VA T Y APE L + D++S G ++ E++ GR
Sbjct: 212 VA-TRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 102/219 (46%), Gaps = 26/219 (11%)
Query: 313 DKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKV---IESDFQGDAEFCNEVEIISNLKH 368
+++ + +G G +G V + G VAVKK+ +S + E+ ++ ++KH
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKH 80
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAK-RPLTWPQRK 427
N++ L E ++ YLV HL + D + + K + LT +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLV----------THLMGA--DLNNIVKCQKLTDDHVQ 128
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+I + +GL Y+H I HRD+K +N+ ++ D ++ DFGLA+ + + +
Sbjct: 129 FLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFV-- 183
Query: 488 VAGTHGYLAPEYAL-YGQLTEKSDVYSFGVVILEIMCGR 525
T Y APE L + + D++S G ++ E++ GR
Sbjct: 184 --ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 102/219 (46%), Gaps = 26/219 (11%)
Query: 313 DKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKV---IESDFQGDAEFCNEVEIISNLKH 368
+++ + +G G +G V + G VAVKK+ +S + E+ ++ ++KH
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKH 80
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAK-RPLTWPQRK 427
N++ L E ++ YLV HL + D + + K + LT +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLV----------THLMGA--DLNNIVKCQKLTDDHVQ 128
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+I + +GL Y+H I HRD+K +N+ ++ D ++ DFGLA+ + + +
Sbjct: 129 FLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFV-- 183
Query: 488 VAGTHGYLAPEYAL-YGQLTEKSDVYSFGVVILEIMCGR 525
T Y APE L + + D++S G ++ E++ GR
Sbjct: 184 --ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 96/215 (44%), Gaps = 28/215 (13%)
Query: 321 IGRGGFGLVY--KGILQDGTTVAVKKVIESDFQGDA--EFCNEVEIISNLKHRNLVPLRG 376
IG+G F V + +L G VAVK + ++ + + EV I+ L H N+V L
Sbjct: 23 IGKGNFAKVKLARHVLT-GREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFE 81
Query: 377 CCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKG 436
E YLV +Y G V D+L VA + + + +
Sbjct: 82 VI------ETEKTLYLVMEYASGGEVFDYL---------VAHGRMKEKEARAKFRQIVSA 126
Query: 437 LAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGYLA 496
+ Y H + I HRD+KA N+LLD DM ++ADFG + + G T G+ Y A
Sbjct: 127 VQYCH---QKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDT--FCGSPPYAA 181
Query: 497 PEYALYGQLTE--KSDVYSFGVVILEIMCGRKALD 529
PE G+ + + DV+S GV++ ++ G D
Sbjct: 182 PE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 106/248 (42%), Gaps = 42/248 (16%)
Query: 296 PNTGSIWFKIQDLERATDKFSQKNFIGRGGFGLVYK----GILQDGT--TVAVKKVIESD 349
P S W E D+ +GRG FG V + GI + T TVAVK + E
Sbjct: 16 PYDASKW------EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA 69
Query: 350 FQGDAE-FCNEVEIISNLKHR-NLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLF 407
+ +E++I+ ++ H N+V L G C + G ++ ++ GN+ +L
Sbjct: 70 THSEHRALMSELKILIHIGHHLNVVNLLGAC-----TKPGGPLMVIVEFCKFGNLSTYLR 124
Query: 408 PSFNDGSGVAKRP-------LTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILL 460
N+ P LT VAKG+ +L HRD+ A NILL
Sbjct: 125 SKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILL 181
Query: 461 DADMRARVADFGLAKQ-------SREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYS 513
++ DFGLA+ R+G + L + ++APE T +SDV+S
Sbjct: 182 SEKNVVKICDFGLARDIXKDPDXVRKGDARLPLK------WMAPETIFDRVYTIQSDVWS 235
Query: 514 FGVVILEI 521
FGV++ EI
Sbjct: 236 FGVLLWEI 243
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 103/223 (46%), Gaps = 26/223 (11%)
Query: 307 DLERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAE------FCNEV 360
D++ ++ + +F+G G F VYK ++ + K I+ + +A+ E+
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREI 63
Query: 361 EIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRP 420
+++ L H N++ L +D + S LV+D+M + L D S V
Sbjct: 64 KLLQELSHPNIIGL-----LDAFGHK-SNISLVFDFM-----ETDLEVIIKDNSLV---- 108
Query: 421 LTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREG 480
LT K +L +GL YLH + I HRD+K N+LLD + ++ADFGLAK
Sbjct: 109 LTPSHIKAYMLMTLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSP 165
Query: 481 QSHLTTRVAGTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIM 522
+V T Y APE ++ D+++ G ++ E++
Sbjct: 166 NRAYXHQVV-TRWYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 103/219 (47%), Gaps = 26/219 (11%)
Query: 313 DKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKV---IESDFQGDAEFCNEVEIISNLKH 368
+++ + +G G +G V + G VAVKK+ +S + E+ ++ ++KH
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKH 80
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAK-RPLTWPQRK 427
N++ L E ++ YLV HL + D + + K + LT +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLV----------THLMGA--DLNNIVKCQKLTDDHVQ 128
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+I + +GL Y+H I HRD+K +N+ ++ D ++ D+GLA R +T
Sbjct: 129 FLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDYGLA---RHTDDEMTGY 182
Query: 488 VAGTHGYLAPEYAL-YGQLTEKSDVYSFGVVILEIMCGR 525
VA T Y APE L + + D++S G ++ E++ GR
Sbjct: 183 VA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 102/221 (46%), Gaps = 25/221 (11%)
Query: 310 RATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIES---DFQGDAEFCNEVEIISNL 366
R TD + +G+G F +V + + + T K+I + + + E I L
Sbjct: 28 RFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLL 87
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQR 426
KH N+V L D +E G YLV+D + G + F D VA+ +
Sbjct: 88 KHPNIVRLH-----DSISEEGFH-YLVFDLVTGGEL-------FEDI--VAREYYSEADA 132
Query: 427 KNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRA---RVADFGLAKQSREGQSH 483
+ I + + + ++H + I HRD+K N+LL + + ++ADFGLA + +G+
Sbjct: 133 SHCIHQILESVNHIH---QHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEV-QGEQQ 188
Query: 484 LTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
AGT GYL+PE + D+++ GV++ ++ G
Sbjct: 189 AWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVG 229
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 106/248 (42%), Gaps = 42/248 (16%)
Query: 296 PNTGSIWFKIQDLERATDKFSQKNFIGRGGFGLVYK----GILQDGT--TVAVKKVIESD 349
P S W E D+ +GRG FG V + GI + T TVAVK + E
Sbjct: 16 PYDASKW------EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA 69
Query: 350 FQGDAE-FCNEVEIISNLKHR-NLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLF 407
+ +E++I+ ++ H N+V L G C + G ++ ++ GN+ +L
Sbjct: 70 THSEHRALMSELKILIHIGHHLNVVNLLGAC-----TKPGGPLMVIVEFCKFGNLSTYLR 124
Query: 408 PSFNDGSGVAKRP-------LTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILL 460
N+ P LT VAKG+ +L HRD+ A NILL
Sbjct: 125 SKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILL 181
Query: 461 DADMRARVADFGLAKQ-------SREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYS 513
++ DFGLA+ R+G + L + ++APE T +SDV+S
Sbjct: 182 SEKNVVKICDFGLARDIYKDPDXVRKGDARLPLK------WMAPETIFDRVYTIQSDVWS 235
Query: 514 FGVVILEI 521
FGV++ EI
Sbjct: 236 FGVLLWEI 243
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 106/248 (42%), Gaps = 42/248 (16%)
Query: 296 PNTGSIWFKIQDLERATDKFSQKNFIGRGGFGLVYK----GILQDGT--TVAVKKVIESD 349
P S W E D+ +GRG FG V + GI + T TVAVK + E
Sbjct: 16 PYDASKW------EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA 69
Query: 350 FQGDAE-FCNEVEIISNLKHR-NLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLF 407
+ +E++I+ ++ H N+V L G C + G ++ ++ GN+ +L
Sbjct: 70 THSEHRALMSELKILIHIGHHLNVVNLLGAC-----TKPGGPLMVIVEFCKFGNLSTYLR 124
Query: 408 PSFNDGSGVAKRP-------LTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILL 460
N+ P LT VAKG+ +L HRD+ A NILL
Sbjct: 125 SKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILL 181
Query: 461 DADMRARVADFGLAKQ-------SREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYS 513
++ DFGLA+ R+G + L + ++APE T +SDV+S
Sbjct: 182 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK------WMAPETIFDRVYTIQSDVWS 235
Query: 514 FGVVILEI 521
FGV++ EI
Sbjct: 236 FGVLLWEI 243
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 103/222 (46%), Gaps = 30/222 (13%)
Query: 314 KFSQKNFIGRGGFGLV---YKGILQDGTTVAVKKVIESDFQGDAEFCN----EVEIISNL 366
+++ ++IG G +G+V Y + + VA+KK+ + Q +C E++I+
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQT---YCQRTLREIKILLRF 78
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQR 426
+H N++ + + E+ + Y+V D M + L+ + + L+
Sbjct: 79 RHENIIGINDI-IRAPTIEQMKDVYIVQDLM-----ETDLY------KLLKTQHLSNDHI 126
Query: 427 KNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSH--L 484
+ + +GL Y+H + HRD+K +N+LL+ ++ DFGLA+ + H
Sbjct: 127 CYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGF 183
Query: 485 TTRVAGTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMCGR 525
T T Y APE L + KS D++S G ++ E++ R
Sbjct: 184 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 106/249 (42%), Gaps = 42/249 (16%)
Query: 296 PNTGSIWFKIQDLERATDKFSQKNFIGRGGFGLVYK----GILQDGT--TVAVKKVIESD 349
P S W E D+ +GRG FG V + GI + T TVAVK + E
Sbjct: 7 PYDASKW------EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA 60
Query: 350 FQGDAE-FCNEVEIISNLKHR-NLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLF 407
+ +E++I+ ++ H N+V L G C + G ++ ++ GN+ +L
Sbjct: 61 THSEHRALMSELKILIHIGHHLNVVNLLGAC-----TKPGGPLMVITEFCKFGNLSTYLR 115
Query: 408 PSFNDGSGVAKRP-------LTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILL 460
N+ P LT VAKG+ +L HRD+ A NILL
Sbjct: 116 SKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILL 172
Query: 461 DADMRARVADFGLAKQ-------SREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYS 513
++ DFGLA+ R+G + L + ++APE T +SDV+S
Sbjct: 173 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK------WMAPETIFDRVYTIQSDVWS 226
Query: 514 FGVVILEIM 522
FGV++ EI
Sbjct: 227 FGVLLWEIF 235
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 100/216 (46%), Gaps = 24/216 (11%)
Query: 313 DKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKV-IESDFQG-DAEFCNEVEIISNLKHRN 370
+K+ IG G +G+VYK G T A+KK+ +E + +G + E+ I+ LKH N
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 371 LVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNII 430
+V L +++ LV V +HL V + L K+ +
Sbjct: 62 IVKLYDVI--------HTKKRLVL-------VFEHLDQDLKKLLDVCEGGLESVTAKSFL 106
Query: 431 LDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAG 490
L + G+AY H + HRD+K N+L++ + ++ADFGLA+ T V
Sbjct: 107 LQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV- 162
Query: 491 THGYLAPEYALYG--QLTEKSDVYSFGVVILEIMCG 524
T Y AP+ L G + + D++S G + E++ G
Sbjct: 163 TLWYRAPD-VLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 100/216 (46%), Gaps = 24/216 (11%)
Query: 313 DKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKV-IESDFQG-DAEFCNEVEIISNLKHRN 370
+K+ IG G +G+VYK G T A+KK+ +E + +G + E+ I+ LKH N
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 371 LVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNII 430
+V L +++ LV V +HL V + L K+ +
Sbjct: 62 IVKLYDVI--------HTKKRLVL-------VFEHLDQDLKKLLDVCEGGLESVTAKSFL 106
Query: 431 LDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAG 490
L + G+AY H + HRD+K N+L++ + ++ADFGLA+ T V
Sbjct: 107 LQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV- 162
Query: 491 THGYLAPEYALYG--QLTEKSDVYSFGVVILEIMCG 524
T Y AP+ L G + + D++S G + E++ G
Sbjct: 163 TLWYRAPD-VLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 106/248 (42%), Gaps = 42/248 (16%)
Query: 296 PNTGSIWFKIQDLERATDKFSQKNFIGRGGFGLVYK----GILQDGT--TVAVKKVIESD 349
P S W E D+ +GRG FG V + GI + T TVAVK + E
Sbjct: 7 PYDASKW------EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA 60
Query: 350 FQGDAE-FCNEVEIISNLKHR-NLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLF 407
+ +E++I+ ++ H N+V L G C + G ++ ++ GN+ +L
Sbjct: 61 THSEHRALMSELKILIHIGHHLNVVNLLGAC-----TKPGGPLMVIVEFCKFGNLSTYLR 115
Query: 408 PSFNDGSGVAKRP-------LTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILL 460
N+ P LT VAKG+ +L HRD+ A NILL
Sbjct: 116 SKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILL 172
Query: 461 DADMRARVADFGLAKQ-------SREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYS 513
++ DFGLA+ R+G + L + ++APE T +SDV+S
Sbjct: 173 SEKNVVKICDFGLARDIXKDPDXVRKGDARLPLK------WMAPETIFDRVYTIQSDVWS 226
Query: 514 FGVVILEI 521
FGV++ EI
Sbjct: 227 FGVLLWEI 234
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 103/222 (46%), Gaps = 30/222 (13%)
Query: 314 KFSQKNFIGRGGFGLV---YKGILQDGTTVAVKKVIESDFQGDAEFCN----EVEIISNL 366
+++ ++IG G +G+V Y + + VA+KK+ + Q +C E++I+
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQT---YCQRTLREIKILLRF 78
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQR 426
+H N++ + + E+ + Y+V D M + L+ + + L+
Sbjct: 79 RHENIIGINDI-IRAPTIEQMKDVYIVQDLM-----ETDLY------KLLKTQHLSNDHI 126
Query: 427 KNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSH--L 484
+ + +GL Y+H + HRD+K +N+LL+ ++ DFGLA+ + H
Sbjct: 127 CYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGF 183
Query: 485 TTRVAGTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMCGR 525
T T Y APE L + KS D++S G ++ E++ R
Sbjct: 184 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 106/248 (42%), Gaps = 42/248 (16%)
Query: 296 PNTGSIWFKIQDLERATDKFSQKNFIGRGGFGLVYK----GILQDGT--TVAVKKVIESD 349
P S W E D+ +GRG FG V + GI + T TVAVK + E
Sbjct: 53 PYDASKW------EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA 106
Query: 350 FQGDAE-FCNEVEIISNLKHR-NLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLF 407
+ +E++I+ ++ H N+V L G C + G ++ ++ GN+ +L
Sbjct: 107 THSEHRALMSELKILIHIGHHLNVVNLLGAC-----TKPGGPLMVIVEFCKFGNLSTYLR 161
Query: 408 PSFNDGSGVAKRP-------LTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILL 460
N+ P LT VAKG+ +L HRD+ A NILL
Sbjct: 162 SKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILL 218
Query: 461 DADMRARVADFGLAKQ-------SREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYS 513
++ DFGLA+ R+G + L + ++APE T +SDV+S
Sbjct: 219 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK------WMAPETIFDRVYTIQSDVWS 272
Query: 514 FGVVILEI 521
FGV++ EI
Sbjct: 273 FGVLLWEI 280
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 96/215 (44%), Gaps = 28/215 (13%)
Query: 321 IGRGGFGLVYKGILQ------DGTTVAVKKVIE-SDFQGDAEFCNEVEIISNLKHRNLVP 373
+G G FG VY+G + VAVK + E Q + +F E IIS H+N+V
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 374 LRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLF---PSFNDGSGVAKRPLTWPQRKNII 430
C+ G + + R+++ + M G++ L P + S +A L ++
Sbjct: 98 ----CI--GVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLL-----HVA 146
Query: 431 LDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVA---DFGLAKQSREGQSHLTTR 487
D+A G YL HRDI A N LL RVA DFG+A+ +
Sbjct: 147 RDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGG 203
Query: 488 VAGTH-GYLAPEYALYGQLTEKSDVYSFGVVILEI 521
A ++ PE + G T K+D +SFGV++ EI
Sbjct: 204 CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 238
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 100/217 (46%), Gaps = 31/217 (14%)
Query: 321 IGRGGFGLVYKGILQ-DGTTVAVK-----KVIESDFQGDAEFCNEVEIISNLKHRNLVPL 374
+G G FG V G + G VAVK K+ D G + E++ + +H +++ L
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVG--KIRREIQNLKLFRHPHIIKL 81
Query: 375 RGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVA 434
D ++V +Y+ G + D++ + L + + + +
Sbjct: 82 YQVISTPSDI------FMVMEYVSGGELFDYICKNGR---------LDEKESRRLFQQIL 126
Query: 435 KGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGY 494
G+ Y H + + HRD+K N+LLDA M A++ADFGL+ +G+ G+ Y
Sbjct: 127 SGVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE--FLRXSCGSPNY 181
Query: 495 LAPEYALYGQLTE--KSDVYSFGVVILEIMCGRKALD 529
APE + G+L + D++S GV++ ++CG D
Sbjct: 182 AAPE-VISGRLYAGPEVDIWSSGVILYALLCGTLPFD 217
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 96/215 (44%), Gaps = 28/215 (13%)
Query: 321 IGRGGFGLVYKGILQ------DGTTVAVKKVIE-SDFQGDAEFCNEVEIISNLKHRNLVP 373
+G G FG VY+G + VAVK + E Q + +F E IIS H+N+V
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 374 LRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLF---PSFNDGSGVAKRPLTWPQRKNII 430
C+ G + + R+++ + M G++ L P + S +A L ++
Sbjct: 98 ----CI--GVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLL-----HVA 146
Query: 431 LDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVA---DFGLAKQSREGQSHLTTR 487
D+A G YL HRDI A N LL RVA DFG+A+ +
Sbjct: 147 RDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGG 203
Query: 488 VAGTH-GYLAPEYALYGQLTEKSDVYSFGVVILEI 521
A ++ PE + G T K+D +SFGV++ EI
Sbjct: 204 CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 238
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 107/247 (43%), Gaps = 42/247 (17%)
Query: 321 IGRGGFGLVYKGILQ------DGTTVAVKKVIE-SDFQGDAEFCNEVEIISNLKHRNLVP 373
+G G FG VY+G + VAVK + E Q + +F E IIS H+N+V
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 374 LRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLF---PSFNDGSGVAKRPLTWPQRKNII 430
C+ G + + R+++ + M G++ L P + S +A L ++
Sbjct: 139 ----CI--GVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLL-----HVA 187
Query: 431 LDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVA---DFGLAKQ-SREGQSHLTT 486
D+A G YL + HRDI A N LL RVA DFG+A+ R G
Sbjct: 188 RDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGG 244
Query: 487 RVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIM----------CGRKALDLSTSGS- 535
++ PE + G T K+D +SFGV++ EI ++ L+ TSG
Sbjct: 245 CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGR 304
Query: 536 ---PRAC 539
P+ C
Sbjct: 305 MDPPKNC 311
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 104/220 (47%), Gaps = 28/220 (12%)
Query: 313 DKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKV---IESDFQGDAEFCNEVEIISNLKH 368
+++ + +G G +G V + G VAVKK+ +S + E+ ++ ++KH
Sbjct: 45 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKH 103
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAK-RPLTWPQRK 427
N++ L E ++ YLV HL + D + + K + LT +
Sbjct: 104 ENVIGLLDVFTPARSLEEFNDVYLV----------THLMGA--DLNNIVKCQKLTDDHVQ 151
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQS-REGQSHLTT 486
+I + +GL Y+H I HRD+K +N+ ++ D ++ DFGLA+ + E ++ T
Sbjct: 152 FLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVAT 208
Query: 487 RVAGTHGYLAPEYAL-YGQLTEKSDVYSFGVVILEIMCGR 525
R Y APE L + + D++S G ++ E++ GR
Sbjct: 209 R-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 96/215 (44%), Gaps = 28/215 (13%)
Query: 321 IGRGGFGLVYKGILQ------DGTTVAVKKVIE-SDFQGDAEFCNEVEIISNLKHRNLVP 373
+G G FG VY+G + VAVK + E Q + +F E IIS H+N+V
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 374 LRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLF---PSFNDGSGVAKRPLTWPQRKNII 430
C+ G + + R+++ + M G++ L P + S +A L ++
Sbjct: 90 ----CI--GVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLL-----HVA 138
Query: 431 LDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVA---DFGLAKQSREGQSHLTTR 487
D+A G YL HRDI A N LL RVA DFG+A+ +
Sbjct: 139 RDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGG 195
Query: 488 VAGTH-GYLAPEYALYGQLTEKSDVYSFGVVILEI 521
A ++ PE + G T K+D +SFGV++ EI
Sbjct: 196 CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 230
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 102/234 (43%), Gaps = 47/234 (20%)
Query: 313 DKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFC------------NEV 360
+ + K +GRG +V + I + K+I D G F EV
Sbjct: 4 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKII--DVTGGGSFSAEEVQELREATLKEV 61
Query: 361 EIISNLK-HRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKR 419
+I+ + H N++ L+ E + +LV+D M G + D+L K
Sbjct: 62 DILRKVSGHPNIIQLKDTY------ETNTFFFLVFDLMKKGELFDYL---------TEKV 106
Query: 420 PLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSRE 479
L+ + + I+ + + + LH K I HRD+K NILLD DM ++ DFG + Q
Sbjct: 107 TLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP 163
Query: 480 GQSHLTTRVAGTHGYLAPE---------YALYGQLTEKSDVYSFGVVILEIMCG 524
G+ V GT YLAPE + YG+ + D++S GV++ ++ G
Sbjct: 164 GEK--LREVCGTPSYLAPEIIECSMNDNHPGYGK---EVDMWSTGVIMYTLLAG 212
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 106/249 (42%), Gaps = 42/249 (16%)
Query: 296 PNTGSIWFKIQDLERATDKFSQKNFIGRGGFGLVYK----GILQDGT--TVAVKKVIESD 349
P S W E D+ +GRG FG V + GI + T TVAVK + E
Sbjct: 7 PYDASKW------EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA 60
Query: 350 FQGDAE-FCNEVEIISNLKHR-NLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLF 407
+ +E++I+ ++ H N+V L G C + G ++ ++ GN+ +L
Sbjct: 61 THSEHRALMSELKILIHIGHHLNVVNLLGAC-----TKPGGPLMVITEFCKFGNLSTYLR 115
Query: 408 PSFNDGSGVAKRP-------LTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILL 460
N+ P LT VAKG+ +L HRD+ A NILL
Sbjct: 116 SKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILL 172
Query: 461 DADMRARVADFGLAKQ-------SREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYS 513
++ DFGLA+ R+G + L + ++APE T +SDV+S
Sbjct: 173 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK------WMAPETIFDRVYTIQSDVWS 226
Query: 514 FGVVILEIM 522
FGV++ EI
Sbjct: 227 FGVLLWEIF 235
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 106/248 (42%), Gaps = 42/248 (16%)
Query: 296 PNTGSIWFKIQDLERATDKFSQKNFIGRGGFGLVYK----GILQDGT--TVAVKKVIESD 349
P S W E D+ +GRG FG V + GI + T TVAVK + E
Sbjct: 7 PYDASKW------EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA 60
Query: 350 FQGDAE-FCNEVEIISNLKHR-NLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLF 407
+ +E++I+ ++ H N+V L G C + G ++ ++ GN+ +L
Sbjct: 61 THSEHRALMSELKILIHIGHHLNVVNLLGAC-----TKPGGPLMVITEFCKFGNLSTYLR 115
Query: 408 PSFNDGSGVAKRP-------LTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILL 460
N+ P LT VAKG+ +L HRD+ A NILL
Sbjct: 116 SKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILL 172
Query: 461 DADMRARVADFGLAKQ-------SREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYS 513
++ DFGLA+ R+G + L + ++APE T +SDV+S
Sbjct: 173 SEKNVVKICDFGLARDIXKDPDXVRKGDARLPLK------WMAPETIFDRVYTIQSDVWS 226
Query: 514 FGVVILEI 521
FGV++ EI
Sbjct: 227 FGVLLWEI 234
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 102/234 (43%), Gaps = 47/234 (20%)
Query: 313 DKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFC------------NEV 360
+ + K +GRG +V + I + K+I D G F EV
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKII--DVTGGGSFSAEEVQELREATLKEV 74
Query: 361 EIISNLK-HRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKR 419
+I+ + H N++ L+ E + +LV+D M G + D+L K
Sbjct: 75 DILRKVSGHPNIIQLKDTY------ETNTFFFLVFDLMKKGELFDYL---------TEKV 119
Query: 420 PLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSRE 479
L+ + + I+ + + + LH K I HRD+K NILLD DM ++ DFG + Q
Sbjct: 120 TLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP 176
Query: 480 GQSHLTTRVAGTHGYLAPE---------YALYGQLTEKSDVYSFGVVILEIMCG 524
G+ V GT YLAPE + YG+ + D++S GV++ ++ G
Sbjct: 177 GEK--LREVCGTPSYLAPEIIECSMNDNHPGYGK---EVDMWSTGVIMYTLLAG 225
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 97/215 (45%), Gaps = 28/215 (13%)
Query: 321 IGRGGFGLVYKGILQ------DGTTVAVKKVIE-SDFQGDAEFCNEVEIISNLKHRNLVP 373
+G G FG VY+G + VAVK + E Q + +F E IIS H+N+V
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 374 LRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLF---PSFNDGSGVAKRPLTWPQRKNII 430
C+ G + + R+++ + M G++ L P + S +A L ++
Sbjct: 116 ----CI--GVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLL-----HVA 164
Query: 431 LDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVA---DFGLAKQ-SREGQSHLTT 486
D+A G YL + HRDI A N LL RVA DFG+A+ R G
Sbjct: 165 RDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGG 221
Query: 487 RVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEI 521
++ PE + G T K+D +SFGV++ EI
Sbjct: 222 CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 256
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 100/216 (46%), Gaps = 24/216 (11%)
Query: 313 DKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKV-IESDFQG-DAEFCNEVEIISNLKHRN 370
+K+ IG G +G+VYK G T A+KK+ +E + +G + E+ I+ LKH N
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 371 LVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNII 430
+V L +++ LV V +HL V + L K+ +
Sbjct: 62 IVKLYDVI--------HTKKRLVL-------VFEHLDQDLKKLLDVCEGGLESVTAKSFL 106
Query: 431 LDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAG 490
L + G+AY H + HRD+K N+L++ + ++ADFGLA+ T +
Sbjct: 107 LQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV- 162
Query: 491 THGYLAPEYALYG--QLTEKSDVYSFGVVILEIMCG 524
T Y AP+ L G + + D++S G + E++ G
Sbjct: 163 TLWYRAPD-VLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 106/247 (42%), Gaps = 42/247 (17%)
Query: 321 IGRGGFGLVYKGILQ------DGTTVAVKKVIE-SDFQGDAEFCNEVEIISNLKHRNLVP 373
+G G FG VY+G + VAVK + E Q + +F E IIS H+N+V
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 374 LRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLF---PSFNDGSGVAKRPLTWPQRKNII 430
C+ G + + R+++ + M G++ L P + S +A L ++
Sbjct: 115 ----CI--GVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLL-----HVA 163
Query: 431 LDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVA---DFGLAKQSREGQSHLTTR 487
D+A G YL HRDI A N LL RVA DFG+A+ +
Sbjct: 164 RDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGG 220
Query: 488 VAGTH-GYLAPEYALYGQLTEKSDVYSFGVVILEIM----------CGRKALDLSTSGS- 535
A ++ PE + G T K+D +SFGV++ EI ++ L+ TSG
Sbjct: 221 CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGR 280
Query: 536 ---PRAC 539
P+ C
Sbjct: 281 MDPPKNC 287
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 103/235 (43%), Gaps = 34/235 (14%)
Query: 310 RATDKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKH 368
R F + +G+G FG V K D A+KK+ ++ + + +EV ++++L H
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE-EKLSTILSEVMLLASLNH 61
Query: 369 RNLVPLRGCCVVDGD-------NERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
+ +V + + ++ S ++ +Y NG + D L S N +R
Sbjct: 62 QYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYD-LIHSENLNQ---QRDE 117
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAK------ 475
W + I+ + L+Y+H I HRD+K NI +D ++ DFGLAK
Sbjct: 118 YWRLFRQIL----EALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSL 170
Query: 476 -------QSREGQSHLTTRVAGTHGYLAPEYAL-YGQLTEKSDVYSFGVVILEIM 522
Q+ G S T GT Y+A E G EK D+YS G++ E++
Sbjct: 171 DILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 106/247 (42%), Gaps = 42/247 (17%)
Query: 321 IGRGGFGLVYKGILQ------DGTTVAVKKVIE-SDFQGDAEFCNEVEIISNLKHRNLVP 373
+G G FG VY+G + VAVK + E Q + +F E IIS H+N+V
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 374 LRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLF---PSFNDGSGVAKRPLTWPQRKNII 430
C+ G + + R+++ + M G++ L P + S +A L ++
Sbjct: 105 ----CI--GVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLL-----HVA 153
Query: 431 LDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVA---DFGLAKQSREGQSHLTTR 487
D+A G YL HRDI A N LL RVA DFG+A+ +
Sbjct: 154 RDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGG 210
Query: 488 VAGTH-GYLAPEYALYGQLTEKSDVYSFGVVILEIM----------CGRKALDLSTSGS- 535
A ++ PE + G T K+D +SFGV++ EI ++ L+ TSG
Sbjct: 211 CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGR 270
Query: 536 ---PRAC 539
P+ C
Sbjct: 271 MDPPKNC 277
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 99/218 (45%), Gaps = 24/218 (11%)
Query: 313 DKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKV---IESDFQGDAEFCNEVEIISNLKH 368
+++ + +G G +G V + G VAVKK+ +S + E+ ++ ++KH
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKH 80
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKN 428
N++ L E ++ YLV M + + V + LT +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-----------GADLNNIVKSQKLTDDHVQF 129
Query: 429 IILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRV 488
+I + +GL Y+H I HRD+K +N+ ++ D ++ DFGL R +T V
Sbjct: 130 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLC---RHTDDEMTGYV 183
Query: 489 AGTHGYLAPEYAL-YGQLTEKSDVYSFGVVILEIMCGR 525
A T Y APE L + + D++S G ++ E++ GR
Sbjct: 184 A-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 102/234 (43%), Gaps = 47/234 (20%)
Query: 313 DKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFC------------NEV 360
+ + K +GRG +V + I + K+I D G F EV
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKII--DVTGGGSFSAEEVQELREATLKEV 74
Query: 361 EIISNLK-HRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKR 419
+I+ + H N++ L+ E + +LV+D M G + D+L K
Sbjct: 75 DILRKVSGHPNIIQLKDTY------ETNTFFFLVFDLMKKGELFDYL---------TEKV 119
Query: 420 PLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSRE 479
L+ + + I+ + + + LH K I HRD+K NILLD DM ++ DFG + Q
Sbjct: 120 TLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP 176
Query: 480 GQSHLTTRVAGTHGYLAPE---------YALYGQLTEKSDVYSFGVVILEIMCG 524
G+ V GT YLAPE + YG+ + D++S GV++ ++ G
Sbjct: 177 GEK--LRSVCGTPSYLAPEIIECSMNDNHPGYGK---EVDMWSTGVIMYTLLAG 225
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 104/219 (47%), Gaps = 26/219 (11%)
Query: 313 DKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKV---IESDFQGDAEFCNEVEIISNLKH 368
+++ + +G G +G V + G VAVKK+ +S + E+ ++ ++KH
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKH 100
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAK-RPLTWPQRK 427
N++ L E ++ YLV HL + D + + K + LT +
Sbjct: 101 ENVIGLLDVFTPARSLEEFNDVYLV----------THLMGA--DLNNIVKCQKLTDDHVQ 148
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+I + +GL Y+H I HRD+K +N+ ++ D ++ DFGLA+ + + +
Sbjct: 149 FLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMXGX 202
Query: 488 VAGTHGYLAPEYAL-YGQLTEKSDVYSFGVVILEIMCGR 525
VA T Y APE L + + D++S G ++ E++ GR
Sbjct: 203 VA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 106/247 (42%), Gaps = 42/247 (17%)
Query: 321 IGRGGFGLVYKGILQ------DGTTVAVKKVIE-SDFQGDAEFCNEVEIISNLKHRNLVP 373
+G G FG VY+G + VAVK + E Q + +F E IIS H+N+V
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIV- 123
Query: 374 LRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLF---PSFNDGSGVAKRPLTWPQRKNII 430
C+ G + + R+++ + M G++ L P + S +A L ++
Sbjct: 124 ---RCI--GVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLL-----HVA 173
Query: 431 LDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVA---DFGLAKQSREGQSHLTTR 487
D+A G YL HRDI A N LL RVA DFG+A+ +
Sbjct: 174 RDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGG 230
Query: 488 VAGTH-GYLAPEYALYGQLTEKSDVYSFGVVILEIM----------CGRKALDLSTSGS- 535
A ++ PE + G T K+D +SFGV++ EI ++ L+ TSG
Sbjct: 231 CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGR 290
Query: 536 ---PRAC 539
P+ C
Sbjct: 291 MDPPKNC 297
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 107/247 (43%), Gaps = 42/247 (17%)
Query: 321 IGRGGFGLVYKGILQ------DGTTVAVKKVIE-SDFQGDAEFCNEVEIISNLKHRNLVP 373
+G G FG VY+G + VAVK + E Q + +F E IIS H+N+V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 374 LRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLF---PSFNDGSGVAKRPLTWPQRKNII 430
C+ G + + R+++ + M G++ L P + S +A L ++
Sbjct: 113 ----CI--GVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLL-----HVA 161
Query: 431 LDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVA---DFGLAKQSREGQSHLTTR 487
D+A G YL + HRDI A N LL RVA DFG+A+ +
Sbjct: 162 RDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGG 218
Query: 488 VAGTH-GYLAPEYALYGQLTEKSDVYSFGVVILEIM----------CGRKALDLSTSGS- 535
A ++ PE + G T K+D +SFGV++ EI ++ L+ TSG
Sbjct: 219 CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGR 278
Query: 536 ---PRAC 539
P+ C
Sbjct: 279 MDPPKNC 285
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 99/221 (44%), Gaps = 26/221 (11%)
Query: 309 ERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDA--EFCNEVEIISNL 366
E D F + + +G G G+V K + + +K+I + + + E++++
Sbjct: 12 ELKDDDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHEC 71
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQR 426
+V G DG E + ++M G++D V K P+
Sbjct: 72 NSPYIVGFYGAFYSDG------EISICMEHMDGGSLDQ-----------VLKEAKRIPEE 114
Query: 427 --KNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHL 484
+ + V +GLAYL K I HRD+K +NIL+++ ++ DFG++ Q + +
Sbjct: 115 ILGKVSIAVLRGLAYLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---M 169
Query: 485 TTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGR 525
GT Y+APE + +SD++S G+ ++E+ GR
Sbjct: 170 ANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGR 210
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 96/210 (45%), Gaps = 26/210 (12%)
Query: 321 IGRGGFGLV---YKGILQDGTTVAVKKVIESDFQGDAEF---CNEVEIISNLKHRNLVPL 374
IG G G+V Y IL+ VA+KK + FQ E+ ++ + H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKK-LSRPFQNQTHAKRAYRELVLMKVVNHKNIIGL 88
Query: 375 RGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVA 434
E + Y+V + M + N+ S V + L + ++ +
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELM-DANL-----------SQVIQMELDHERMSYLLYQML 136
Query: 435 KGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGY 494
G+ +LH I HRD+K +NI++ +D ++ DFGLA+ + G S + T T Y
Sbjct: 137 VGIKHLHSA---GIIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVVTRYY 191
Query: 495 LAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
APE L E D++S G ++ E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 106/247 (42%), Gaps = 42/247 (17%)
Query: 321 IGRGGFGLVYKGILQ------DGTTVAVKKVIE-SDFQGDAEFCNEVEIISNLKHRNLVP 373
+G G FG VY+G + VAVK + E Q + +F E IIS H+N+V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 374 LRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLF---PSFNDGSGVAKRPLTWPQRKNII 430
C+ G + + R+++ + M G++ L P + S +A L ++
Sbjct: 99 ----CI--GVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLL-----HVA 147
Query: 431 LDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVA---DFGLAKQSREGQSHLTTR 487
D+A G YL HRDI A N LL RVA DFG+A+ +
Sbjct: 148 RDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGG 204
Query: 488 VAGTH-GYLAPEYALYGQLTEKSDVYSFGVVILEIM----------CGRKALDLSTSGS- 535
A ++ PE + G T K+D +SFGV++ EI ++ L+ TSG
Sbjct: 205 CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGR 264
Query: 536 ---PRAC 539
P+ C
Sbjct: 265 MDPPKNC 271
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 115/260 (44%), Gaps = 31/260 (11%)
Query: 321 IGRGGFGLVYKGIL-----QDGTTVAVKKVIESDFQGDAE--FCNEVEIISNL-KHRNLV 372
+G G FG V + +D K+++S D + +E++I+S+L +H N+V
Sbjct: 39 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 98
Query: 373 PLRGCCVVDGDNERGSERYLVYDYMPN---GNVDDHLFPSF---NDGSGVAK---RPLTW 423
L G C G +E Y Y + N + L PS D G+ K RPL
Sbjct: 99 NLLGACTHGGPVLVITE-YCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLEL 157
Query: 424 PQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSH 483
+ VA+G+A+L HRD+ A N+LL A++ DFGLA+ ++
Sbjct: 158 RDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNY 214
Query: 484 LTTRVAGTH-GYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLSTSGSPRACLIT 542
+ A ++APE T +SDV+S+G+++ EI L + P L+
Sbjct: 215 IVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI------FSLGLNPYP-GILVN 267
Query: 543 DWVWSLVKAGKVWQALDPSL 562
+ LVK G +Q P+
Sbjct: 268 SKFYKLVKDG--YQMAQPAF 285
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 99/219 (45%), Gaps = 29/219 (13%)
Query: 321 IGRGGFGLVYKGILQD-GTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPL----- 374
+G GG GLV+ + D VA+KK++ +D Q E++II L H N+V +
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 375 -RGCCVVD--GDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKR-PLTWPQRKNII 430
G + D G + Y+V +YM D + V ++ PL + +
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYME------------TDLANVLEQGPLLEEHARLFM 126
Query: 431 LDVAKGLAYLHYGVKPAIYHRDIKATNILLDA-DMRARVADFGLAKQSREGQSHLTTRVA 489
+ +GL Y+H + HRD+K N+ ++ D+ ++ DFGLA+ SH
Sbjct: 127 YQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSE 183
Query: 490 G--THGYLAPEYALY-GQLTEKSDVYSFGVVILEIMCGR 525
G T Y +P L T+ D+++ G + E++ G+
Sbjct: 184 GLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 99/222 (44%), Gaps = 32/222 (14%)
Query: 312 TDKFSQKNFIGRGGFGLVYKGILQDGTTVA------VKKVIESDFQGDAEFCNEVEIISN 365
+D++ + +G G +G V + +D T A +KK + +EV ++
Sbjct: 20 SDRYQRVKKLGSGAYGEVL--LCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQ 77
Query: 366 LKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQ 425
L H N++ L E YLV + G + D + + ++ +
Sbjct: 78 LDHPNIMKLYEFF------EDKRNYYLVMEVYRGGELFDEI---------ILRQKFSEVD 122
Query: 426 RKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMR---ARVADFGLAKQSREGQS 482
I+ V G YLH K I HRD+K N+LL++ R ++ DFGL+ G
Sbjct: 123 AAVIMKQVLSGTTYLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVG-G 178
Query: 483 HLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
+ R+ GT Y+APE L + EK DV+S GV++ ++CG
Sbjct: 179 KMKERL-GTAYYIAPE-VLRKKYDEKCDVWSCGVILYILLCG 218
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 106/247 (42%), Gaps = 42/247 (17%)
Query: 321 IGRGGFGLVYKGILQ------DGTTVAVKKVIE-SDFQGDAEFCNEVEIISNLKHRNLVP 373
+G G FG VY+G + VAVK + E Q + +F E IIS H+N+V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 374 LRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLF---PSFNDGSGVAKRPLTWPQRKNII 430
C+ G + + R+++ + M G++ L P + S +A L ++
Sbjct: 99 ----CI--GVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLL-----HVA 147
Query: 431 LDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVA---DFGLAKQSREGQSHLTTR 487
D+A G YL HRDI A N LL RVA DFG+A+ +
Sbjct: 148 RDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGG 204
Query: 488 VAGTH-GYLAPEYALYGQLTEKSDVYSFGVVILEIM----------CGRKALDLSTSGS- 535
A ++ PE + G T K+D +SFGV++ EI ++ L+ TSG
Sbjct: 205 CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGR 264
Query: 536 ---PRAC 539
P+ C
Sbjct: 265 MDPPKNC 271
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 107/247 (43%), Gaps = 42/247 (17%)
Query: 321 IGRGGFGLVYKGILQ------DGTTVAVKKVIES-DFQGDAEFCNEVEIISNLKHRNLVP 373
+G G FG VY+G + VAVK + E Q + +F E IIS H+N+V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIV- 111
Query: 374 LRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLF---PSFNDGSGVAKRPLTWPQRKNII 430
C+ G + + R+++ + M G++ L P + S +A L ++
Sbjct: 112 ---RCI--GVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLL-----HVA 161
Query: 431 LDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVA---DFGLAKQSREGQSHLTTR 487
D+A G YL + HRDI A N LL RVA DFG+A+ +
Sbjct: 162 RDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGG 218
Query: 488 VAGTH-GYLAPEYALYGQLTEKSDVYSFGVVILEIM----------CGRKALDLSTSGS- 535
A ++ PE + G T K+D +SFGV++ EI ++ L+ TSG
Sbjct: 219 CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGR 278
Query: 536 ---PRAC 539
P+ C
Sbjct: 279 MDPPKNC 285
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 96/210 (45%), Gaps = 26/210 (12%)
Query: 321 IGRGGFGLV---YKGILQDGTTVAVKKVIESDFQGDAEF---CNEVEIISNLKHRNLVPL 374
IG G G+V Y IL+ VA+KK + FQ E+ ++ + H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKK-LSRPFQNQTHAKRAYRELVLMKVVNHKNIIGL 88
Query: 375 RGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVA 434
E + Y+V + M + N+ S V + L + ++ +
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELM-DANL-----------SQVIQMELDHERMSYLLYQML 136
Query: 435 KGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGY 494
G+ +LH I HRD+K +NI++ +D ++ DFGLA+ + G S + T T Y
Sbjct: 137 CGIKHLHSA---GIIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVVTRYY 191
Query: 495 LAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
APE L E D++S G ++ E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 106/218 (48%), Gaps = 26/218 (11%)
Query: 313 DKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKV-IESDFQG-DAEFCNEVEIISNLKHRN 370
+K+ + +G G +G+VYK G VA+K++ ++++ +G + E+ ++ L H N
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 371 LVPLRGCCVVDGDNERGSER--YLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKN 428
+V L SER LV+++M + L ++ K L Q K
Sbjct: 81 IVSLIDVI--------HSERCLTLVFEFM-----EKDLKKVLDEN----KTGLQDSQIKI 123
Query: 429 IILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRV 488
+ + +G+A+ H + I HRD+K N+L+++D ++ADFGLA+ T V
Sbjct: 124 YLYQLLRGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEV 180
Query: 489 AGTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMCGR 525
T Y AP+ + + S D++S G + E++ G+
Sbjct: 181 V-TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 8/164 (4%)
Query: 432 DVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGT 491
++ L YLH + + +RD+K N++LD D ++ DFGL K+ + + + T GT
Sbjct: 256 EIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT-FCGT 312
Query: 492 HGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLSTSGSPRACLITDWVWSLVKA 551
YLAPE D + GVV+ E+MCGR ++ + +
Sbjct: 313 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTL 372
Query: 552 GKVWQALDPSLLKEDDFLSL-----NPKAIMERFVLVGILCAHV 590
G ++L LLK+D L + K IM+ GI+ HV
Sbjct: 373 GPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHV 416
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 96/210 (45%), Gaps = 26/210 (12%)
Query: 321 IGRGGFGLV---YKGILQDGTTVAVKKVIESDFQGDAEF---CNEVEIISNLKHRNLVPL 374
IG G G+V Y IL+ VA+KK + FQ E+ ++ + H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKK-LSRPFQNQTHAKRAYRELVLMKCVNHKNIIGL 88
Query: 375 RGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVA 434
E + Y+V + M + N+ S V + L + ++ +
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELM-DANL-----------SQVIQMELDHERMSYLLYQML 136
Query: 435 KGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGY 494
G+ +LH I HRD+K +NI++ +D ++ DFGLA+ + G S + T T Y
Sbjct: 137 CGIKHLHSA---GIIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVVTRYY 191
Query: 495 LAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
APE L E D++S G ++ E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 8/164 (4%)
Query: 432 DVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGT 491
++ L YLH + + +RD+K N++LD D ++ DFGL K+ + + + T GT
Sbjct: 259 EIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT-FCGT 315
Query: 492 HGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLSTSGSPRACLITDWVWSLVKA 551
YLAPE D + GVV+ E+MCGR ++ + +
Sbjct: 316 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTL 375
Query: 552 GKVWQALDPSLLKEDDFLSL-----NPKAIMERFVLVGILCAHV 590
G ++L LLK+D L + K IM+ GI+ HV
Sbjct: 376 GPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHV 419
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 105/240 (43%), Gaps = 36/240 (15%)
Query: 296 PNTGSI----WFKIQDLERATDKFSQKNFIGRGGFGLVY----KGILQDGTTVAVKKVIE 347
P T S+ W + + +D F ++ +GRG +VY KG + +KK ++
Sbjct: 32 PGTASLVPDYWIDGSNRDALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVD 91
Query: 348 SDFQGDAEFCNEVEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLF 407
E+ ++ L H N++ L+ E +E LV + + G + D +
Sbjct: 92 KKI-----VRTEIGVLLRLSHPNIIKLKEIF------ETPTEISLVLELVTGGELFDRI- 139
Query: 408 PSFNDGSGVAKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDA---DM 464
V K + + + + + +AYLH + I HRD+K N+L D
Sbjct: 140 --------VEKGYYSERDAADAVKQILEAVAYLH---ENGIVHRDLKPENLLYATPAPDA 188
Query: 465 RARVADFGLAKQSREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
++ADFGL+K E Q + T V GT GY APE + D++S G++ ++CG
Sbjct: 189 PLKIADFGLSKIV-EHQVLMKT-VCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCG 246
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 102/219 (46%), Gaps = 26/219 (11%)
Query: 313 DKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKV---IESDFQGDAEFCNEVEIISNLKH 368
+++ + +G G +G V + G VAVKK+ +S + E+ ++ ++KH
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKH 80
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAK-RPLTWPQRK 427
N++ L E ++ YLV HL + D + + K + LT +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLV----------THLMGA--DLNNIVKCQKLTDDHVQ 128
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+I + +GL Y+H I HRD+K +N+ ++ D ++ FGLA R +T
Sbjct: 129 FLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILGFGLA---RHTDDEMTGY 182
Query: 488 VAGTHGYLAPEYAL-YGQLTEKSDVYSFGVVILEIMCGR 525
VA T Y APE L + + D++S G ++ E++ GR
Sbjct: 183 VA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 106/218 (48%), Gaps = 26/218 (11%)
Query: 313 DKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKV-IESDFQG-DAEFCNEVEIISNLKHRN 370
+K+ + +G G +G+VYK G VA+K++ ++++ +G + E+ ++ L H N
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 371 LVPLRGCCVVDGDNERGSER--YLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKN 428
+V L SER LV+++M + L ++ K L Q K
Sbjct: 81 IVSLIDVI--------HSERCLTLVFEFM-----EKDLKKVLDEN----KTGLQDSQIKI 123
Query: 429 IILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRV 488
+ + +G+A+ H + I HRD+K N+L+++D ++ADFGLA+ T V
Sbjct: 124 YLYQLLRGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEV 180
Query: 489 AGTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMCGR 525
T Y AP+ + + S D++S G + E++ G+
Sbjct: 181 V-TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 110/226 (48%), Gaps = 22/226 (9%)
Query: 310 RATDKFSQKNFIGRGGFGLVYKG--ILQDGTTVAVKKV-IESDFQG-DAEFCNEVEIISN 365
RA ++ IG G +G V+K + G VA+K+V +++ +G EV ++ +
Sbjct: 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRH 67
Query: 366 LK---HRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLT 422
L+ H N+V L C V +R ++ LV++++ D ++ D V + +
Sbjct: 68 LETFEHPNVVRLFDVCTV-SRTDRETKLTLVFEHV------DQDLTTYLDK--VPEPGVP 118
Query: 423 WPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQS 482
K+++ + +GL +LH + HRD+K NIL+ + + ++ADFGLA+ Q
Sbjct: 119 TETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLAR-IYSFQM 174
Query: 483 HLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKAL 528
LT+ V T Y APE L D++S G + E M RK L
Sbjct: 175 ALTS-VVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAE-MFRRKPL 218
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 79/173 (45%), Gaps = 24/173 (13%)
Query: 355 EFCNEVEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGS 414
E NE+ ++ +L H N++ L E YLV ++ G LF
Sbjct: 92 EIYNEISLLKSLDHPNIIKLFDVF------EDKKYFYLVTEFYEGG----ELFEQI---- 137
Query: 415 GVAKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDAD---MRARVADF 471
+ + NI+ + G+ YLH K I HRDIK NILL+ + ++ DF
Sbjct: 138 -INRHKFDECDAANIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIKIVDF 193
Query: 472 GLAKQSREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
GL+ S + + GT Y+APE L + EK DV+S GV++ ++CG
Sbjct: 194 GLS--SFFSKDYKLRDRLGTAYYIAPE-VLKKKYNEKCDVWSCGVIMYILLCG 243
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 102/219 (46%), Gaps = 26/219 (11%)
Query: 313 DKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKV---IESDFQGDAEFCNEVEIISNLKH 368
+++ + +G G +G V + G VAVKK+ +S + E+ ++ ++KH
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKH 80
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAK-RPLTWPQRK 427
N++ L E ++ YLV HL + D + + K + LT +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLV----------THLMGA--DLNNIVKCQKLTDDHVQ 128
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+I + +GL Y+H I HRD+K +N+ ++ D ++ DF LA R +T
Sbjct: 129 FLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFYLA---RHTDDEMTGY 182
Query: 488 VAGTHGYLAPEYAL-YGQLTEKSDVYSFGVVILEIMCGR 525
VA T Y APE L + + D++S G ++ E++ GR
Sbjct: 183 VA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 94/210 (44%), Gaps = 26/210 (12%)
Query: 321 IGRGGFG--LVYKGILQD---GTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPLR 375
IG+G FG L+ + ++ V KK I + ++ N+KH LV L
Sbjct: 46 IGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLH 105
Query: 376 GCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAK 435
+ + Y V DY+ G + HL +R P+ + ++A
Sbjct: 106 FSF------QTADKLYFVLDYINGGELFYHL---------QRERCFLEPRARFYAAEIAS 150
Query: 436 GLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGYL 495
L YLH I +RD+K NILLD+ + DFGL K++ E S T+ GT YL
Sbjct: 151 ALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNS-TTSTFCGTPEYL 206
Query: 496 APEYALYGQLTEKS-DVYSFGVVILEIMCG 524
APE L+ Q +++ D + G V+ E++ G
Sbjct: 207 APE-VLHKQPYDRTVDWWCLGAVLYEMLYG 235
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 102/219 (46%), Gaps = 26/219 (11%)
Query: 313 DKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKV---IESDFQGDAEFCNEVEIISNLKH 368
+++ + +G G +G V + G VAVKK+ +S + E+ ++ ++KH
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKH 80
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAK-RPLTWPQRK 427
N++ L E ++ YLV HL + D + + K + LT +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLV----------THLMGA--DLNNIVKCQKLTDDHVQ 128
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+I + +GL Y+H I HRD+K +N+ ++ D ++ D GLA R +T
Sbjct: 129 FLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDAGLA---RHTDDEMTGY 182
Query: 488 VAGTHGYLAPEYAL-YGQLTEKSDVYSFGVVILEIMCGR 525
VA T Y APE L + + D++S G ++ E++ GR
Sbjct: 183 VA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 99/222 (44%), Gaps = 32/222 (14%)
Query: 312 TDKFSQKNFIGRGGFGLVYKGILQDGTTVA------VKKVIESDFQGDAEFCNEVEIISN 365
+D++ + +G G +G V + +D T A +KK + +EV ++
Sbjct: 3 SDRYQRVKKLGSGAYGEVL--LCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQ 60
Query: 366 LKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQ 425
L H N++ L E YLV + G + D + + ++ +
Sbjct: 61 LDHPNIMKLYEFF------EDKRNYYLVMEVYRGGELFDEI---------ILRQKFSEVD 105
Query: 426 RKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMR---ARVADFGLAKQSREGQS 482
I+ V G YLH K I HRD+K N+LL++ R ++ DFGL+ G
Sbjct: 106 AAVIMKQVLSGTTYLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVG-G 161
Query: 483 HLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
+ R+ GT Y+APE L + EK DV+S GV++ ++CG
Sbjct: 162 KMKERL-GTAYYIAPE-VLRKKYDEKCDVWSCGVILYILLCG 201
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 110/226 (48%), Gaps = 22/226 (9%)
Query: 310 RATDKFSQKNFIGRGGFGLVYKG--ILQDGTTVAVKKV-IESDFQG-DAEFCNEVEIISN 365
RA ++ IG G +G V+K + G VA+K+V +++ +G EV ++ +
Sbjct: 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRH 67
Query: 366 LK---HRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLT 422
L+ H N+V L C V +R ++ LV++++ D ++ D V + +
Sbjct: 68 LETFEHPNVVRLFDVCTV-SRTDRETKLTLVFEHV------DQDLTTYLDK--VPEPGVP 118
Query: 423 WPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQS 482
K+++ + +GL +LH + HRD+K NIL+ + + ++ADFGLA+ Q
Sbjct: 119 TETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLAR-IYSFQM 174
Query: 483 HLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKAL 528
LT+ V T Y APE L D++S G + E M RK L
Sbjct: 175 ALTS-VVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAE-MFRRKPL 218
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 110/226 (48%), Gaps = 22/226 (9%)
Query: 310 RATDKFSQKNFIGRGGFGLVYKG--ILQDGTTVAVKKV-IESDFQG-DAEFCNEVEIISN 365
RA ++ IG G +G V+K + G VA+K+V +++ +G EV ++ +
Sbjct: 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRH 67
Query: 366 LK---HRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLT 422
L+ H N+V L C V +R ++ LV++++ D ++ D V + +
Sbjct: 68 LETFEHPNVVRLFDVCTV-SRTDRETKLTLVFEHV------DQDLTTYLDK--VPEPGVP 118
Query: 423 WPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQS 482
K+++ + +GL +LH + HRD+K NIL+ + + ++ADFGLA+ Q
Sbjct: 119 TETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLAR-IYSFQM 174
Query: 483 HLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKAL 528
LT+ V T Y APE L D++S G + E M RK L
Sbjct: 175 ALTS-VVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAE-MFRRKPL 218
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 100/217 (46%), Gaps = 31/217 (14%)
Query: 321 IGRGGFGLVYKGILQ-DGTTVAVK-----KVIESDFQGDAEFCNEVEIISNLKHRNLVPL 374
+G G FG V G Q G VAVK K+ D G + E++ + +H +++ L
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIK--REIQNLKLFRHPHIIKL 76
Query: 375 RGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVA 434
D ++V +Y+ G + D++ A+R + +
Sbjct: 77 YQVISTPTDF------FMVMEYVSGGELFDYICKHGRVEEMEARR---------LFQQIL 121
Query: 435 KGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGY 494
+ Y H + + HRD+K N+LLDA M A++ADFGL+ +G+ T+ G+ Y
Sbjct: 122 SAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTS--CGSPNY 176
Query: 495 LAPEYALYGQLTE--KSDVYSFGVVILEIMCGRKALD 529
APE + G+L + D++S GV++ ++CG D
Sbjct: 177 AAPE-VISGRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 96/211 (45%), Gaps = 26/211 (12%)
Query: 321 IGRGGFGLV---YKGILQDGTTVAVKKVIESDFQGDAEF---CNEVEIISNLKHRNLVPL 374
IG G G+V Y IL+ VA+KK + FQ E+ ++ + H+N++ L
Sbjct: 26 IGSGAQGIVCAAYDAILE--RNVAIKK-LSRPFQNQTHAKRAYRELVLMKCVNHKNIIGL 82
Query: 375 RGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVA 434
E + Y+V + M + N+ V + L + ++ +
Sbjct: 83 LNVFTPQKSLEEFQDVYIVMELM-DANL-----------CQVIQMELDHERMSYLLYQML 130
Query: 435 KGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGY 494
G+ +LH I HRD+K +NI++ +D ++ DFGLA+ + G S + T T Y
Sbjct: 131 CGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYY 185
Query: 495 LAPEYALYGQLTEKSDVYSFGVVILEIMCGR 525
APE L E D++S G ++ E++C +
Sbjct: 186 RAPEVILGMGYKENVDLWSVGCIMGEMVCHK 216
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 96/210 (45%), Gaps = 26/210 (12%)
Query: 321 IGRGGFGLV---YKGILQDGTTVAVKKVIESDFQGDAEF---CNEVEIISNLKHRNLVPL 374
IG G G+V Y IL+ VA+KK + FQ E+ ++ + H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKK-LSRPFQNQTHAKRAYRELVLMKCVNHKNIIGL 88
Query: 375 RGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVA 434
E + Y+V + M + N+ S V + L + ++ +
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELM-DANL-----------SQVIQMELDHERMSYLLYQML 136
Query: 435 KGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGY 494
G+ +LH I HRD+K +NI++ +D ++ DFGLA+ + G S + T T Y
Sbjct: 137 CGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYY 191
Query: 495 LAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
APE L E D++S G ++ E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 102/219 (46%), Gaps = 26/219 (11%)
Query: 313 DKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKV---IESDFQGDAEFCNEVEIISNLKH 368
+++ + +G G +G V + G VAVKK+ +S + E+ ++ ++KH
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKH 80
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAK-RPLTWPQRK 427
N++ L E ++ YLV HL + D + + K + LT +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLV----------THLMGA--DLNNIVKCQKLTDDHVQ 128
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+I + +GL Y+H I HRD+K +N+ ++ D ++ D GLA R +T
Sbjct: 129 FLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDRGLA---RHTDDEMTGY 182
Query: 488 VAGTHGYLAPEYAL-YGQLTEKSDVYSFGVVILEIMCGR 525
VA T Y APE L + + D++S G ++ E++ GR
Sbjct: 183 VA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 102/224 (45%), Gaps = 34/224 (15%)
Query: 321 IGRGGFGLVYKGILQ-DGTTVAVKKV-IESDFQGDAEFCNEVEIISNLKHRNLVPLRGCC 378
+GRGGFG+V++ + D A+K++ + + + EV+ ++ L+H +V
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAW 72
Query: 379 VVDGDNER---GSERYLVYDYMP---NGNVDDHLFPSFNDGSGVAKRPLTWPQRK---NI 429
+ E+ S + +Y M N+ D + N + +R +R +I
Sbjct: 73 LEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWM----NGRCTIEER-----ERSVCLHI 123
Query: 430 ILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAK---QSREGQSHLT- 485
L +A+ + +LH + HRD+K +NI D +V DFGL Q E Q+ LT
Sbjct: 124 FLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTP 180
Query: 486 -------TRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIM 522
T GT Y++PE + K D++S G+++ E++
Sbjct: 181 MPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 96/211 (45%), Gaps = 26/211 (12%)
Query: 321 IGRGGFGLV---YKGILQDGTTVAVKKVIESDFQGDAEF---CNEVEIISNLKHRNLVPL 374
IG G G+V Y IL+ VA+KK + FQ E+ ++ + H+N++ L
Sbjct: 37 IGSGAQGIVCAAYDAILE--RNVAIKK-LSRPFQNQTHAKRAYRELVLMKCVNHKNIIGL 93
Query: 375 RGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVA 434
E + Y+V + M + N+ V + L + ++ +
Sbjct: 94 LNVFTPQKSLEEFQDVYIVMELM-DANL-----------CQVIQMELDHERMSYLLYQML 141
Query: 435 KGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGY 494
G+ +LH I HRD+K +NI++ +D ++ DFGLA+ + G S + T T Y
Sbjct: 142 CGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYY 196
Query: 495 LAPEYALYGQLTEKSDVYSFGVVILEIMCGR 525
APE L E D++S G ++ E++C +
Sbjct: 197 RAPEVILGMGYKENVDLWSVGCIMGEMVCHK 227
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 98/227 (43%), Gaps = 25/227 (11%)
Query: 310 RATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDF----QGDAEFCNEVEIISN 365
R ++ + F+G+GGF Y+ D V KV+ + E+ I +
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 98
Query: 366 LKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQ 425
L + ++V G E Y+V + ++ + ++ +T P+
Sbjct: 99 LDNPHVVGFHGFF------EDDDFVYVVLEICRRRSLLE---------LHKRRKAVTEPE 143
Query: 426 RKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLA-KQSREGQSHL 484
+ + +G+ YLH + HRD+K N+ L+ DM ++ DFGLA K +G+
Sbjct: 144 ARYFMRQTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKK 200
Query: 485 TTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLS 531
T + GT Y+APE + + D++S G ++ ++ G+ + S
Sbjct: 201 T--LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 112/252 (44%), Gaps = 28/252 (11%)
Query: 321 IGRGGFGLVYKGIL-----QDGTTVAVKKVIESDFQGDAE--FCNEVEIISNL-KHRNLV 372
+G G FG V + +D K+++S D + +E++I+S+L +H N+V
Sbjct: 46 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 105
Query: 373 PLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLF-PSFNDGSGVAKRPLTWPQRKNIIL 431
L G C G ++ +Y G++ + L + D RPL +
Sbjct: 106 NLLGACT------HGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSS 159
Query: 432 DVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGT 491
VA+G+A+L HRD+ A N+LL A++ DFGLA+ +++ A
Sbjct: 160 QVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 216
Query: 492 H-GYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLSTSGSPRACLITDWVWSLVK 550
++APE T +SDV+S+G+++ EI L + P L+ + LVK
Sbjct: 217 PVKWMAPESIFDCVYTVQSDVWSYGILLWEI------FSLGLNPYP-GILVNSKFYKLVK 269
Query: 551 AGKVWQALDPSL 562
G +Q P+
Sbjct: 270 DG--YQMAQPAF 279
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 102/219 (46%), Gaps = 26/219 (11%)
Query: 313 DKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKV---IESDFQGDAEFCNEVEIISNLKH 368
+++ + +G G +G V + G VAVKK+ +S + E+ ++ ++KH
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKH 80
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAK-RPLTWPQRK 427
N++ L E ++ YLV HL + D + + K + LT +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLV----------THLMGA--DLNNIVKCQKLTDDHVQ 128
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+I + +GL Y+H I HRD+K +N+ ++ D ++ D GLA R +T
Sbjct: 129 FLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDGGLA---RHTDDEMTGY 182
Query: 488 VAGTHGYLAPEYAL-YGQLTEKSDVYSFGVVILEIMCGR 525
VA T Y APE L + + D++S G ++ E++ GR
Sbjct: 183 VA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 92/213 (43%), Gaps = 23/213 (10%)
Query: 315 FSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIESDF---QGDAEFCNEVEIISNLKHRN 370
F + IGRG F VY+ L DG VA+KKV D + A+ E++++ L H N
Sbjct: 34 FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPN 93
Query: 371 LVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNII 430
++ + D +E +V + G++ + F + W
Sbjct: 94 VIKYYASFIED------NELNIVLELADAGDLS-RMIKHFKKQKRLIPERTVW----KYF 142
Query: 431 LDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAK--QSREGQSHLTTRV 488
+ + L ++H + HRDIK N+ + A ++ D GL + S+ +H +
Sbjct: 143 VQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAH---SL 196
Query: 489 AGTHGYLAPEYALYGQLTEKSDVYSFGVVILEI 521
GT Y++PE KSD++S G ++ E+
Sbjct: 197 VGTPYYMSPERIHENGYNFKSDIWSLGCLLYEM 229
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 114/252 (45%), Gaps = 28/252 (11%)
Query: 321 IGRGGFGLVYKGIL-----QDGTTVAVKKVIESDFQGDAE--FCNEVEIISNL-KHRNLV 372
+G G FG V + +D K+++S D + +E++I+S+L +H N+V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 373 PLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLF-PSFNDGSGVAKRPLTWPQRKNIIL 431
L G C G ++ +Y G++ + L + D RPL +
Sbjct: 114 NLLGACT------HGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSS 167
Query: 432 DVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGT 491
VA+G+A+L K I HRD+ A N+LL A++ DFGLA+ +++ A
Sbjct: 168 QVAQGMAFL--ASKNCI-HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 224
Query: 492 H-GYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLSTSGSPRACLITDWVWSLVK 550
++APE T +SDV+S+G+++ EI L + P L+ + LVK
Sbjct: 225 PVKWMAPESIFDCVYTVQSDVWSYGILLWEI------FSLGLNPYP-GILVNSKFYKLVK 277
Query: 551 AGKVWQALDPSL 562
G +Q P+
Sbjct: 278 DG--YQMAQPAF 287
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 26/209 (12%)
Query: 321 IGRGGFGLVYKGIL---QDGTTVAVKKVIESDFQGDAE-FCNEVEIISNLKHRNLVPLRG 376
+G G FG V +G+ + VA+K + + + D E E +I+ L + +V L G
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 377 CCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRP-LTWPQRKNIILDVAK 435
C + LV + G + L V KR + ++ V+
Sbjct: 78 VCQAEA-------LMLVMEMAGGGPLHKFL---------VGKREEIPVSNVAELLHQVSM 121
Query: 436 GLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTH--G 493
G+ YL + HRD+ A N+LL A+++DFGL+K S+ T R AG
Sbjct: 122 GMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLK 178
Query: 494 YLAPEYALYGQLTEKSDVYSFGVVILEIM 522
+ APE + + + +SDV+S+GV + E +
Sbjct: 179 WYAPECINFRKFSSRSDVWSYGVTMWEAL 207
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 95/226 (42%), Gaps = 23/226 (10%)
Query: 310 RATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDF----QGDAEFCNEVEIISN 365
R ++ + F+G+GGF Y+ D V KV+ + E+ I +
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 98
Query: 366 LKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQ 425
L + ++V G E Y+V + ++ + ++ +T P+
Sbjct: 99 LDNPHVVGFHGFF------EDDDFVYVVLEICRRRSLLE---------LHKRRKAVTEPE 143
Query: 426 RKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLT 485
+ + +G+ YLH + HRD+K N+ L+ DM ++ DFGLA + E
Sbjct: 144 ARYFMRQTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKI-EFDGERK 199
Query: 486 TRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLS 531
+ GT Y+APE + + D++S G ++ ++ G+ + S
Sbjct: 200 KXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 99/222 (44%), Gaps = 31/222 (13%)
Query: 312 TDKFSQKNFIGRGGFGLVYK------GILQDGTTVAVKKVIESDFQGDAEFCNEVEIISN 365
TD++ IG+G F +V + G + KK+ D Q + E I
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQ---KLEREARICRL 59
Query: 366 LKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQ 425
LKH N+V L D +E G YLV+D + G + F D VA+ +
Sbjct: 60 LKHSNIVRLH-----DSISEEGF-HYLVFDLVTGGEL-------FEDI--VAREYYSEAD 104
Query: 426 RKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRA---RVADFGLAKQSREGQS 482
+ I + + + + H + + HRD+K N+LL + + ++ADFGLA + +G
Sbjct: 105 ASHCIQQILEAVLHCH---QMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEV-QGDQ 160
Query: 483 HLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
AGT GYL+PE + D+++ GV++ ++ G
Sbjct: 161 QAWFGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVG 202
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 92/215 (42%), Gaps = 28/215 (13%)
Query: 321 IGRGGFGLVY--KGILQDGTTVAVKKVIESDFQGDA--EFCNEVEIISNLKHRNLVPLRG 376
IG+G F V + IL G VAVK + ++ + + EV I L H N+V L
Sbjct: 22 IGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFE 80
Query: 377 CCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKG 436
E YLV +Y G V D+L VA + + +
Sbjct: 81 VI------ETEKTLYLVXEYASGGEVFDYL---------VAHGRXKEKEARAKFRQIVSA 125
Query: 437 LAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGYLA 496
+ Y H + I HRD+KA N+LLDAD ++ADFG + + G G Y A
Sbjct: 126 VQYCH---QKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNK--LDAFCGAPPYAA 180
Query: 497 PEYALYGQLTE--KSDVYSFGVVILEIMCGRKALD 529
PE G+ + + DV+S GV++ ++ G D
Sbjct: 181 PE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 95/226 (42%), Gaps = 23/226 (10%)
Query: 310 RATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDF----QGDAEFCNEVEIISN 365
R ++ + F+G+GGF Y+ D V KV+ + E+ I +
Sbjct: 23 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 82
Query: 366 LKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQ 425
L + ++V G E Y+V + ++ + ++ +T P+
Sbjct: 83 LDNPHVVGFHGFF------EDDDFVYVVLEICRRRSLLE---------LHKRRKAVTEPE 127
Query: 426 RKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLT 485
+ + +G+ YLH + HRD+K N+ L+ DM ++ DFGLA + E
Sbjct: 128 ARYFMRQTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKI-EFDGERK 183
Query: 486 TRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLS 531
+ GT Y+APE + + D++S G ++ ++ G+ + S
Sbjct: 184 KDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 229
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 26/208 (12%)
Query: 321 IGRGGFGLV---YKGILQDGTTVAVKKVIESDFQGDAEF---CNEVEIISNLKHRNLVPL 374
IG G G+V Y +L VA+KK + FQ E+ ++ + H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKK-LSRPFQNQTHAKRAYRELVLMKXVNHKNIISL 88
Query: 375 RGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVA 434
E + YLV + M + N+ V + L + ++ +
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELM-DANL-----------XQVIQMELDHERMSYLLYQML 136
Query: 435 KGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGY 494
G+ +LH I HRD+K +NI++ +D ++ DFGLA+ + G S + T T Y
Sbjct: 137 XGIKHLHSA---GIIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRYY 191
Query: 495 LAPEYALYGQLTEKSDVYSFGVVILEIM 522
APE L E D++S G ++ E++
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 95/226 (42%), Gaps = 23/226 (10%)
Query: 310 RATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDF----QGDAEFCNEVEIISN 365
R ++ + F+G+GGF Y+ D V KV+ + E+ I +
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 98
Query: 366 LKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQ 425
L + ++V G E Y+V + ++ + ++ +T P+
Sbjct: 99 LDNPHVVGFHGFF------EDDDFVYVVLEICRRRSLLE---------LHKRRKAVTEPE 143
Query: 426 RKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLT 485
+ + +G+ YLH + HRD+K N+ L+ DM ++ DFGLA + E
Sbjct: 144 ARYFMRQTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKI-EFDGERK 199
Query: 486 TRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLS 531
+ GT Y+APE + + D++S G ++ ++ G+ + S
Sbjct: 200 KDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 105/249 (42%), Gaps = 48/249 (19%)
Query: 310 RATDKFSQKNFIGRGGFGLVYKGILQDGT-TVAVKKV--IESDFQGDAEFCNEVEIISNL 366
+ D + K+ IGRG +G VY ++ VA+KKV + D E+ I++ L
Sbjct: 25 KVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRL 84
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRP--LTWP 424
K ++ L ++ D + E Y+V + + +D + K P LT
Sbjct: 85 KSDYIIRLHDL-IIPEDLLKFDELYIVLEI------------ADSDLKKLFKTPIFLTEQ 131
Query: 425 QRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAK--------- 475
K I+ ++ G ++H + I HRD+K N LL+ D ++ DFGLA+
Sbjct: 132 HVKTILYNLLLGEKFIH---ESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIH 188
Query: 476 ----------------QSREGQSHLTTRVAGTHGYLAPEYALYGQ-LTEKSDVYSFGVVI 518
++ + LT+ V T Y APE L + T D++S G +
Sbjct: 189 IVNDLEEKEENEEPGPHNKNLKKQLTSHVV-TRWYRAPELILLQENYTNSIDIWSTGCIF 247
Query: 519 LEIMCGRKA 527
E++ K+
Sbjct: 248 AELLNMMKS 256
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 118/264 (44%), Gaps = 34/264 (12%)
Query: 321 IGRGGFGLVYKGIL-----QDGTTVAVKKVIESDFQGDAE--FCNEVEIISNL-KHRNLV 372
+G G FG V + +D K+++S D + +E++I+S+L +H N+V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 373 PLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRK----- 427
L G C G ++ +Y G++ + L G + P P+ +
Sbjct: 114 NLLGACT------HGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRD 167
Query: 428 --NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLT 485
+ VA+G+A+L K I HRD+ A N+LL A++ DFGLA+ +++
Sbjct: 168 LLHFSSQVAQGMAFL--ASKNCI-HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 224
Query: 486 TRVAGTH-GYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLSTSGSPRACLITDW 544
A ++APE T +SDV+S+G+++ EI L + P L+
Sbjct: 225 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI------FSLGLNPYP-GILVNSK 277
Query: 545 VWSLVKAGKVWQALDPSLLKEDDF 568
+ LVK G +Q P+ ++ +
Sbjct: 278 FYKLVKDG--YQMAQPAFAPKNIY 299
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 100/229 (43%), Gaps = 47/229 (20%)
Query: 315 FSQKNFIGRGGFGLVYKGILQ-DGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVP 373
F + IG GGFG V+K + DG T +K+V ++ + + EV+ ++ L H N+V
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAE----REVKALAKLDHVNIVH 68
Query: 374 LRGCCVVDGDNERGSERYLVYDYMPNGNVDDH-------LF--PSFNDGSGVAKRPLTWP 424
GC DG +DY P + + LF F D + + W
Sbjct: 69 YNGCW--DG-----------FDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQ----WI 111
Query: 425 QRK-----------NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGL 473
+++ + + KG+ Y+H + +RD+K +NI L + ++ DFGL
Sbjct: 112 EKRRGEKLDKVLALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGL 168
Query: 474 AKQSREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIM 522
+ R GT Y++PE ++ D+Y+ G+++ E++
Sbjct: 169 VTSLKNDGKR--XRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 74/165 (44%), Gaps = 10/165 (6%)
Query: 432 DVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQS-REGQSHLTTRVAG 490
++ L YLH + + +RD+K N++LD D ++ DFGL K+ ++G + G
Sbjct: 116 EIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKXFCG 171
Query: 491 THGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLSTSGSPRACLITDWVWSLVK 550
T YLAPE D + GVV+ E+MCGR ++ + +
Sbjct: 172 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRT 231
Query: 551 AGKVWQALDPSLLKEDDFLSL-----NPKAIMERFVLVGILCAHV 590
G ++L LLK+D L + K IM+ GI+ HV
Sbjct: 232 LGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHV 276
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 74/165 (44%), Gaps = 10/165 (6%)
Query: 432 DVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQS-REGQSHLTTRVAG 490
++ L YLH + + +RD+K N++LD D ++ DFGL K+ ++G + G
Sbjct: 118 EIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKXFCG 173
Query: 491 THGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLSTSGSPRACLITDWVWSLVK 550
T YLAPE D + GVV+ E+MCGR ++ + +
Sbjct: 174 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRT 233
Query: 551 AGKVWQALDPSLLKEDDFLSL-----NPKAIMERFVLVGILCAHV 590
G ++L LLK+D L + K IM+ GI+ HV
Sbjct: 234 LGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHV 278
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 111/239 (46%), Gaps = 28/239 (11%)
Query: 303 FKIQ---DLERATDKFSQKN-FIGRGGFGLVYKGILQDGTTV---AVKKVIESDFQGDAE 355
FK++ + ER D F + +GRG +G VYK +DG A+K++ + A
Sbjct: 7 FKVKLSSERERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSA- 65
Query: 356 FCNEVEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSG 415
C E+ ++ LKH N++ L+ + D + +L++DY + D F+ S
Sbjct: 66 -CREIALLRELKHPNVISLQKVFLSHADR----KVWLLFDYAEH---DLWHIIKFHRASK 117
Query: 416 VAKRPLTWPQ--RKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDAD----MRARVA 469
K+P+ P+ K+++ + G+ YLH + HRD+K NIL+ + R ++A
Sbjct: 118 ANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIA 174
Query: 470 DFGLAKQSREGQSHLT--TRVAGTHGYLAPEYALYGQ-LTEKSDVYSFGVVILEIMCGR 525
D G A+ L V T Y APE L + T+ D+++ G + E++
Sbjct: 175 DMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE 233
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 93/223 (41%), Gaps = 40/223 (17%)
Query: 313 DKFSQKNFIGRGGFGLV-----------YKGILQDGTTVAVKKVIESDFQGDAEFCNEVE 361
D+F + IG G FG V Y + D V K IE NE
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-------LNEKR 93
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
I+ + LV L DN S Y+V +YMP G++ HL + +
Sbjct: 94 ILQAVNFPFLVKLEFSF---KDN---SNLYMVMEYMPGGDMFSHL-------RRIGR--F 138
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
+ P + + YLH + +RD+K N+L+D +VADFG AK+ + G+
Sbjct: 139 SEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK-GR 194
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
T + GT YLAPE L + D ++ GV+I E+ G
Sbjct: 195 ---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 74/165 (44%), Gaps = 10/165 (6%)
Query: 432 DVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQS-REGQSHLTTRVAG 490
++ L YLH + + +RD+K N++LD D ++ DFGL K+ ++G + G
Sbjct: 117 EIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKXFCG 172
Query: 491 THGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLSTSGSPRACLITDWVWSLVK 550
T YLAPE D + GVV+ E+MCGR ++ + +
Sbjct: 173 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRT 232
Query: 551 AGKVWQALDPSLLKEDDFLSL-----NPKAIMERFVLVGILCAHV 590
G ++L LLK+D L + K IM+ GI+ HV
Sbjct: 233 LGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHV 277
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 93/223 (41%), Gaps = 40/223 (17%)
Query: 313 DKFSQKNFIGRGGFGLV-----------YKGILQDGTTVAVKKVIESDFQGDAEFCNEVE 361
D+F + IG G FG V Y + D V K IE NE
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-------LNEKR 93
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
I+ + LV L DN S Y+V +YMP G++ HL + +
Sbjct: 94 ILQAVNFPFLVKLEFSF---KDN---SNLYMVMEYMPGGDMFSHL-------RRIGR--F 138
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
+ P + + YLH + +RD+K N+L+D +VADFG AK+ + G+
Sbjct: 139 SEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK-GR 194
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
T + GT YLAPE L + D ++ GV+I E+ G
Sbjct: 195 ---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 102/224 (45%), Gaps = 31/224 (13%)
Query: 310 RATDKFSQKNFIGRGGFGLVYK------GILQDGTTVAVKKVIESDFQGDAEFCNEVEII 363
R T+++ +G+G F +V + G + KK+ D Q + E I
Sbjct: 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQ---KLEREARIC 64
Query: 364 SNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTW 423
LKH N+V L D +E G YL++D + G + F D VA+ +
Sbjct: 65 RLLKHPNIVRLH-----DSISEEG-HHYLIFDLVTGGEL-------FEDI--VAREYYSE 109
Query: 424 PQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRA---RVADFGLAKQSREG 480
+ I + + + + H + + HR++K N+LL + ++ ++ADFGLA + EG
Sbjct: 110 ADASHCIQQILEAVLHCH---QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEV-EG 165
Query: 481 QSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
+ AGT GYL+PE + D+++ GV++ ++ G
Sbjct: 166 EQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG 209
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 31/217 (14%)
Query: 321 IGRGGFGLVYKGILQ-DGTTVAVK-----KVIESDFQGDAEFCNEVEIISNLKHRNLVPL 374
+G G FG V G Q G VAVK K+ D G + E++ + +H +++ L
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIK--REIQNLKLFRHPHIIKL 76
Query: 375 RGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVA 434
D ++V +Y+ G + D++ A+R + +
Sbjct: 77 YQVISTPTDF------FMVMEYVSGGELFDYICKHGRVEEMEARR---------LFQQIL 121
Query: 435 KGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGY 494
+ Y H + + HRD+K N+LLDA M A++ADFGL+ +G+ G+ Y
Sbjct: 122 SAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE--FLRDSCGSPNY 176
Query: 495 LAPEYALYGQLTE--KSDVYSFGVVILEIMCGRKALD 529
APE + G+L + D++S GV++ ++CG D
Sbjct: 177 AAPE-VISGRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 100/242 (41%), Gaps = 28/242 (11%)
Query: 311 ATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESD--FQGDAEFCNEVE--IISNL 366
D F +G+G FG V +++ + KV++ D Q D C E I+S
Sbjct: 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLA 80
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQR 426
++ + CC D + V +++ G++ H+ S R +
Sbjct: 81 RNHPFLTQLFCCFQTPDR-----LFFVMEFVNGGDLMFHIQKS---------RRFDEARA 126
Query: 427 KNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTT 486
+ ++ L +LH I +RD+K N+LLD + ++ADFG+ K+ T
Sbjct: 127 RFYAAEIISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGI-CNGVTTA 182
Query: 487 RVAGTHGYLAPEY---ALYGQLTEKSDVYSFGVVILEIMCGRKALDLSTSGSPRACLITD 543
GT Y+APE LYG D ++ GV++ E++CG + ++ D
Sbjct: 183 TFCGTPDYIAPEILQEMLYGPAV---DWWAMGVLLYEMLCGHAPFEAENEDDLFEAILND 239
Query: 544 WV 545
V
Sbjct: 240 EV 241
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 102/235 (43%), Gaps = 34/235 (14%)
Query: 310 RATDKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKH 368
R F + +G+G FG V K D A+KK+ ++ + + +EV ++++L H
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE-EKLSTILSEVMLLASLNH 61
Query: 369 RNLVPLRGCCVVDGD-------NERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
+ +V + + ++ S ++ +Y N + D L S N +R
Sbjct: 62 QYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYD-LIHSENLNQ---QRDE 117
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAK------ 475
W + I+ + L+Y+H I HRD+K NI +D ++ DFGLAK
Sbjct: 118 YWRLFRQIL----EALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSL 170
Query: 476 -------QSREGQSHLTTRVAGTHGYLAPEYAL-YGQLTEKSDVYSFGVVILEIM 522
Q+ G S T GT Y+A E G EK D+YS G++ E++
Sbjct: 171 DILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 95/211 (45%), Gaps = 26/211 (12%)
Query: 321 IGRGGFGLV---YKGILQDGTTVAVKKVIESDFQGDAEF---CNEVEIISNLKHRNLVPL 374
IG G G+V Y IL+ VA+KK + FQ E+ ++ + H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKK-LSRPFQNQTHAKRAYRELVLMKCVNHKNIIGL 88
Query: 375 RGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVA 434
E + Y+V + M + N+ V + L + ++ +
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELM-DANL-----------CQVIQMELDHERMSYLLYQML 136
Query: 435 KGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGY 494
G+ +LH I HRD+K +NI++ +D ++ DFGLA+ + G S + T Y
Sbjct: 137 CGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMEPEVVTRYY 191
Query: 495 LAPEYALYGQLTEKSDVYSFGVVILEIMCGR 525
APE L E D++S G ++ E++C +
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVCHK 222
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 95/210 (45%), Gaps = 26/210 (12%)
Query: 321 IGRGGFGLV---YKGILQDGTTVAVKKVIESDFQGDAEF---CNEVEIISNLKHRNLVPL 374
IG G G+V Y IL+ VA+KK + FQ E+ ++ + H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKK-LSRPFQNQTHAKRAYRELVLMKCVNHKNIIGL 88
Query: 375 RGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVA 434
E + Y+V + M + N+ V + L + ++ +
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELM-DANL-----------CQVIQMELDHERMSYLLYQML 136
Query: 435 KGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGY 494
G+ +LH I HRD+K +NI++ +D ++ DFGLA+ + G S + T T Y
Sbjct: 137 CGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPEVVTRYY 191
Query: 495 LAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
APE L E D++S G ++ E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 95/210 (45%), Gaps = 26/210 (12%)
Query: 321 IGRGGFGLV---YKGILQDGTTVAVKKVIESDFQGDAEF---CNEVEIISNLKHRNLVPL 374
IG G G+V Y IL+ VA+KK + FQ E+ ++ + H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKK-LSRPFQNQTHAKRAYRELVLMKCVNHKNIIGL 88
Query: 375 RGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVA 434
E + Y+V + M + N+ V + L + ++ +
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELM-DANL-----------CQVIQMELDHERMSYLLYQML 136
Query: 435 KGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGY 494
G+ +LH I HRD+K +NI++ +D ++ DFGLA+ + G S + T T Y
Sbjct: 137 CGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYY 191
Query: 495 LAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
APE L E D++S G ++ E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 26/208 (12%)
Query: 321 IGRGGFGLV---YKGILQDGTTVAVKKVIESDFQGDAEF---CNEVEIISNLKHRNLVPL 374
IG G G+V Y +L VA+KK + FQ E+ ++ + H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKK-LSRPFQNQTHAKRAYRELVLMKCVNHKNIISL 88
Query: 375 RGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVA 434
E + YLV + M + N+ V + L + ++ +
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELM-DANL-----------XQVIQMELDHERMSYLLYQML 136
Query: 435 KGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGY 494
G+ +LH I HRD+K +NI++ +D ++ DFGLA+ + G S + T T Y
Sbjct: 137 XGIKHLHSA---GIIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRYY 191
Query: 495 LAPEYALYGQLTEKSDVYSFGVVILEIM 522
APE L E D++S G ++ E++
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 93/210 (44%), Gaps = 25/210 (11%)
Query: 321 IGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQGD---AEFCNEVEIISNLKHRNLVPLRG 376
+G G +G V I + G VA+KK + FQ + E+ ++ +++H N++ L
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKK-LSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLD 108
Query: 377 CCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKG 436
+ YLV +M D + + + + ++ + KG
Sbjct: 109 VFTPASSLRNFYDFYLVMPFMQT------------DLQKIMGMEFSEEKIQYLVYQMLKG 156
Query: 437 LAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGYLA 496
L Y+H + HRD+K N+ ++ D ++ DFGLA R + +T V T Y A
Sbjct: 157 LKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLA---RHADAEMTGYVV-TRWYRA 209
Query: 497 PEYAL-YGQLTEKSDVYSFGVVILEIMCGR 525
PE L + + D++S G ++ E++ G+
Sbjct: 210 PEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 93/210 (44%), Gaps = 25/210 (11%)
Query: 321 IGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQGD---AEFCNEVEIISNLKHRNLVPLRG 376
+G G +G V I + G VA+KK + FQ + E+ ++ +++H N++ L
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKK-LSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLD 90
Query: 377 CCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKG 436
+ YLV +M D + + + + ++ + KG
Sbjct: 91 VFTPASSLRNFYDFYLVMPFMQT------------DLQKIMGLKFSEEKIQYLVYQMLKG 138
Query: 437 LAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGYLA 496
L Y+H + HRD+K N+ ++ D ++ DFGLA R + +T V T Y A
Sbjct: 139 LKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLA---RHADAEMTGYVV-TRWYRA 191
Query: 497 PEYAL-YGQLTEKSDVYSFGVVILEIMCGR 525
PE L + + D++S G ++ E++ G+
Sbjct: 192 PEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 99/217 (45%), Gaps = 25/217 (11%)
Query: 314 KFSQKNFIGRGGFG---LVYKGILQDGTTVAVKKVIES---DFQGDAEFCNEVEIISNLK 367
+F +G+G FG LV K D + KV++ + E +I+ +
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 84
Query: 368 HRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRK 427
H +V L +G + YL+ D++ G+ LF + + T K
Sbjct: 85 HPFIVKLHYAFQTEG------KLYLILDFLRGGD----LFTRLS-----KEVMFTEEDVK 129
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+ ++A L +LH I +RD+K NILLD + ++ DFGL+K+S + + +
Sbjct: 130 FYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS- 185
Query: 488 VAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
GT Y+APE T+ +D +SFGV++ E++ G
Sbjct: 186 FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 26/208 (12%)
Query: 321 IGRGGFGLV---YKGILQDGTTVAVKKVIESDFQGDAEF---CNEVEIISNLKHRNLVPL 374
IG G G+V Y +L VA+KK + FQ E+ ++ + H+N++ L
Sbjct: 25 IGSGAQGIVCAAYDAVL--DRNVAIKK-LSRPFQNQTHAKRAYRELVLMKCVNHKNIISL 81
Query: 375 RGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVA 434
E + YLV + M + N+ V + L + ++ +
Sbjct: 82 LNVFTPQKTLEEFQDVYLVMELM-DANL-----------XQVIQMELDHERMSYLLYQML 129
Query: 435 KGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGY 494
G+ +LH I HRD+K +NI++ +D ++ DFGLA+ + G S + T T Y
Sbjct: 130 XGIKHLHSA---GIIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRYY 184
Query: 495 LAPEYALYGQLTEKSDVYSFGVVILEIM 522
APE L E D++S G ++ E++
Sbjct: 185 RAPEVILGMGYKENVDIWSVGCIMGEMV 212
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 97/213 (45%), Gaps = 31/213 (14%)
Query: 321 IGRGGFGLVYK------GILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPL 374
+G+G F +V + G + KK+ D Q + E I LKH N+V L
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQ---KLEREARICRLLKHPNIVRL 86
Query: 375 RGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVA 434
D +E G YL++D + G + F D VA+ + + I +
Sbjct: 87 H-----DSISEEG-HHYLIFDLVTGGEL-------FEDI--VAREYYSEADASHCIQQIL 131
Query: 435 KGLAYLHYGVKPAIYHRDIKATNILLDADMRA---RVADFGLAKQSREGQSHLTTRVAGT 491
+ + + H + + HRD+K N+LL + ++ ++ADFGLA + EG+ AGT
Sbjct: 132 EAVLHCH---QMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEV-EGEQQAWFGFAGT 187
Query: 492 HGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
GYL+PE + D+++ GV++ ++ G
Sbjct: 188 PGYLSPEVLRKDPYGKPVDLWACGVILYILLVG 220
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 95/210 (45%), Gaps = 26/210 (12%)
Query: 321 IGRGGFGLV---YKGILQDGTTVAVKKVIESDFQGDAEF---CNEVEIISNLKHRNLVPL 374
IG G G+V Y IL+ VA+KK + FQ E+ ++ + H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKK-LSRPFQNQTHAKRAYRELVLMKCVNHKNIIGL 88
Query: 375 RGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVA 434
E + Y+V + M + N+ V + L + ++ +
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELM-DANL-----------CQVIQMELDHERMSYLLYQML 136
Query: 435 KGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGY 494
G+ +LH I HRD+K +NI++ +D ++ DFGLA+ + G S + T T Y
Sbjct: 137 CGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYY 191
Query: 495 LAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
APE L E D++S G ++ E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 99/217 (45%), Gaps = 25/217 (11%)
Query: 314 KFSQKNFIGRGGFG---LVYKGILQDGTTVAVKKVIES---DFQGDAEFCNEVEIISNLK 367
+F +G+G FG LV K D + KV++ + E +I+ +
Sbjct: 26 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 85
Query: 368 HRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRK 427
H +V L +G + YL+ D++ G+ LF + + T K
Sbjct: 86 HPFIVKLHYAFQTEG------KLYLILDFLRGGD----LFTRLS-----KEVMFTEEDVK 130
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+ ++A L +LH I +RD+K NILLD + ++ DFGL+K+S + + +
Sbjct: 131 FYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS- 186
Query: 488 VAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
GT Y+APE T+ +D +SFGV++ E++ G
Sbjct: 187 FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 98/223 (43%), Gaps = 27/223 (12%)
Query: 315 FSQKNFIGRGGFGLVYKGILQ-DGTTVAVKKVIESDFQGDA-EFCNEVEIISNLKHRNLV 372
F K+ +G G +G+V + G VA+KK+ D A E++I+ + KH N++
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENII 72
Query: 373 PLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILD 432
+ D E +E Y++ + M D H ++ + L+ + I
Sbjct: 73 TIFNIQRPDS-FENFNEVYIIQELM---QTDLH--------RVISTQMLSDDHIQYFIYQ 120
Query: 433 VAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSRE---------GQSH 483
+ + LH + HRD+K +N+L++++ +V DFGLA+ E GQ
Sbjct: 121 TLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQS 177
Query: 484 LTTRVAGTHGYLAPEYALY-GQLTEKSDVYSFGVVILEIMCGR 525
T T Y APE L + + DV+S G ++ E+ R
Sbjct: 178 GMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 418 KRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLA-KQ 476
++ LT P+ + + + G YLH + + HRD+K N+ L+ D+ ++ DFGLA K
Sbjct: 115 RKALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV 171
Query: 477 SREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLS 531
+G+ T + GT Y+APE + + DV+S G ++ ++ G+ + S
Sbjct: 172 EYDGERKKT--LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 224
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 103/238 (43%), Gaps = 45/238 (18%)
Query: 313 DKFSQKNFIGRGGFGLVYKGILQDGT-TVAVKKV--IESDFQGDAEFCNEVEIISNLKHR 369
D + K+ IGRG +G VY ++ VA+KKV + D E+ I++ LK
Sbjct: 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 85
Query: 370 NLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRP--LTWPQRK 427
++ L + D D + E Y+V + + +D + K P LT K
Sbjct: 86 YIIRLYDLIIPD-DLLKFDELYIVLEI------------ADSDLKKLFKTPIFLTEEHIK 132
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAK------------ 475
I+ ++ G ++H + I HRD+K N LL+ D +V DFGLA+
Sbjct: 133 TILYNLLLGENFIH---ESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVN 189
Query: 476 ----------QSREGQSHLTTRVAGTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIM 522
++ + LT+ V T Y APE L + KS D++S G + E++
Sbjct: 190 DLEENEEPGPHNKNLKKQLTSHVV-TRWYRAPELILLQENYTKSIDIWSTGCIFAELL 246
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 26/208 (12%)
Query: 321 IGRGGFGLV---YKGILQDGTTVAVKKVIESDFQGDAEF---CNEVEIISNLKHRNLVPL 374
IG G G+V Y +L VA+KK + FQ E+ ++ + H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKK-LSRPFQNQTHAKRAYRELVLMKXVNHKNIISL 88
Query: 375 RGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVA 434
E + YLV + M + N+ V + L + ++ +
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELM-DANL-----------XQVIQMELDHERMSYLLYQML 136
Query: 435 KGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGY 494
G+ +LH I HRD+K +NI++ +D ++ DFGLA+ + G S + T T Y
Sbjct: 137 CGIKHLHSA---GIIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRYY 191
Query: 495 LAPEYALYGQLTEKSDVYSFGVVILEIM 522
APE L E D++S G ++ E++
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 95/210 (45%), Gaps = 26/210 (12%)
Query: 321 IGRGGFGLV---YKGILQDGTTVAVKKVIESDFQGDAEF---CNEVEIISNLKHRNLVPL 374
IG G G+V Y IL+ VA+KK + FQ E+ ++ + H+N++ L
Sbjct: 33 IGSGAQGIVCAAYDAILE--RNVAIKK-LSRPFQNQTHAKRAYRELVLMKCVNHKNIIGL 89
Query: 375 RGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVA 434
E + Y+V + M + N+ V + L + ++ +
Sbjct: 90 LNVFTPQKSLEEFQDVYIVMELM-DANL-----------CQVIQMELDHERMSYLLYQML 137
Query: 435 KGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGY 494
G+ +LH I HRD+K +NI++ +D ++ DFGLA+ + G S + T T Y
Sbjct: 138 CGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYY 192
Query: 495 LAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
APE L E D++S G ++ E++ G
Sbjct: 193 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 418 KRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLA-KQ 476
++ LT P+ + + + G YLH + + HRD+K N+ L+ D+ ++ DFGLA K
Sbjct: 111 RKALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV 167
Query: 477 SREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLS 531
+G+ T + GT Y+APE + + DV+S G ++ ++ G+ + S
Sbjct: 168 EYDGERKKT--LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 220
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 418 KRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLA-KQ 476
++ LT P+ + + + G YLH + + HRD+K N+ L+ D+ ++ DFGLA K
Sbjct: 111 RKALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV 167
Query: 477 SREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLS 531
+G+ T + GT Y+APE + + DV+S G ++ ++ G+ + S
Sbjct: 168 EYDGERKKT--LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 220
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 99/217 (45%), Gaps = 25/217 (11%)
Query: 314 KFSQKNFIGRGGFG---LVYKGILQDGTTVAVKKVIES---DFQGDAEFCNEVEIISNLK 367
+F +G+G FG LV K D + KV++ + E +I+ +
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 84
Query: 368 HRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRK 427
H +V L +G + YL+ D++ G+ LF + + T K
Sbjct: 85 HPFIVKLHYAFQTEG------KLYLILDFLRGGD----LFTRLS-----KEVMFTEEDVK 129
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+ ++A L +LH I +RD+K NILLD + ++ DFGL+K+S + + +
Sbjct: 130 FYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS- 185
Query: 488 VAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
GT Y+APE T+ +D +SFGV++ E++ G
Sbjct: 186 FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 98/223 (43%), Gaps = 27/223 (12%)
Query: 315 FSQKNFIGRGGFGLVYKGILQ-DGTTVAVKKVIESDFQGDA-EFCNEVEIISNLKHRNLV 372
F K+ +G G +G+V + G VA+KK+ D A E++I+ + KH N++
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENII 72
Query: 373 PLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILD 432
+ D E +E Y++ + M D H ++ + L+ + I
Sbjct: 73 TIFNIQRPDS-FENFNEVYIIQELM---QTDLH--------RVISTQMLSDDHIQYFIYQ 120
Query: 433 VAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSRE---------GQSH 483
+ + LH + HRD+K +N+L++++ +V DFGLA+ E GQ
Sbjct: 121 TLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQS 177
Query: 484 LTTRVAGTHGYLAPEYALY-GQLTEKSDVYSFGVVILEIMCGR 525
T T Y APE L + + DV+S G ++ E+ R
Sbjct: 178 GMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 106/231 (45%), Gaps = 30/231 (12%)
Query: 315 FSQKNFIGRGGFGLV--YKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLV 372
F QK +G GGF V +G L DG A+K+++ + Q E E ++ H N++
Sbjct: 33 FIQK--LGEGGFSYVDLVEG-LHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNIL 89
Query: 373 PLRGCCVVDGDNERGS--ERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNII 430
L C+ ERG+ E +L+ + G + + + + G+ + + + W ++
Sbjct: 90 RLVAYCL----RERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILW-----LL 140
Query: 431 LDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQS---REGQSHLTT- 486
L + +GL +H HRD+K TNILL + + + D G Q+ EG T
Sbjct: 141 LGICRGLEAIH---AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTL 197
Query: 487 ----RVAGTHGYLAPE-YALYGQ--LTEKSDVYSFGVVILEIMCGRKALDL 530
T Y APE +++ + E++DV+S G V+ +M G D+
Sbjct: 198 QDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDM 248
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 97/221 (43%), Gaps = 25/221 (11%)
Query: 313 DKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQGDA---EFCNEVEIISNLKH 368
D F +G+G FG VY Q+ +A+K + +S + + + E+EI S+L+H
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKN 428
N++ + D +R YL+ ++ P G + L G +R T+
Sbjct: 74 PNILRMYNYF---HDRKRI---YLMLEFAPRGELYKELQ---KHGRFDEQRSATF----- 119
Query: 429 IILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRV 488
+ ++A L Y H + + HRDIK N+L+ ++ADFG S S +
Sbjct: 120 -MEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGW---SVHAPSLRRRXM 172
Query: 489 AGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALD 529
GT YL PE EK D++ GV+ E + G D
Sbjct: 173 CGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 114/271 (42%), Gaps = 36/271 (13%)
Query: 313 DKFSQKNFIGRGGFGLVYKGILQDGTT---VAVKKVIESDFQGDAEFCN---EVEIISNL 366
D F IG+G FG V I+Q T A+K + + E N E++I+ L
Sbjct: 15 DHFEILRAIGKGSFGKV--CIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGL 72
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQR 426
+H LV L + D ++V D + G++ HL + + K
Sbjct: 73 EHPFLVNLWYSFQDEED------MFMVVDLLLGGDLRYHLQQNVHFKEETVKL------- 119
Query: 427 KNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQ-SREGQSHLT 485
I ++ L YL I HRD+K NILLD + DF +A RE Q
Sbjct: 120 --FICELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQ---I 171
Query: 486 TRVAGTHGYLAPEYALYGQLTEKS---DVYSFGVVILEIMCGRKALDLSTSGSPRACLIT 542
T +AGT Y+APE + S D +S GV E++ GR+ + +S S + + T
Sbjct: 172 TTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHT 231
Query: 543 DWVWSLVKAGKVWQALDPSLLKEDDFLSLNP 573
+ ++V W SLLK+ L NP
Sbjct: 232 -FETTVVTYPSAWSQEMVSLLKK--LLEPNP 259
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Query: 432 DVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQ-SREGQSHLTTRVAG 490
++ L YLH I HRD+K NILL+ DM ++ DFG AK S E + G
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVG 196
Query: 491 THGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
T Y++PE ++ SD+++ G +I +++ G
Sbjct: 197 TAQYVSPELLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 106/239 (44%), Gaps = 34/239 (14%)
Query: 305 IQDLERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQG-------DAEFC 357
I +L ++ + FI G +G V G+ +G VA+K+V + G D+ C
Sbjct: 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLC 73
Query: 358 N----EVEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDG 413
E+ ++++ H N++ LR V + + YLV + M L +D
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRD-IFVHFEEPAMHKLYLVTELMRTD-----LAQVIHD- 126
Query: 414 SGVAKRPLTWPQR-KNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFG 472
+R + PQ + + + GL LH + + HRD+ NILL + + DF
Sbjct: 127 ----QRIVISPQHIQYFMYHILLGLHVLH---EAGVVHRDLHPGNILLADNNDITICDFN 179
Query: 473 LAKQ--SREGQSHLTTRVAGTHGYLAPEYAL-YGQLTEKSDVYSFGVVILEIMCGRKAL 528
LA++ + ++H T Y APE + + T+ D++S G V+ E M RKAL
Sbjct: 180 LAREDTADANKTHYVTH----RWYRAPELVMQFKGFTKLVDMWSAGCVMAE-MFNRKAL 233
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 116/260 (44%), Gaps = 40/260 (15%)
Query: 321 IGRGGFGLVYKGIL-----QDGTTVAVKKVIESDFQGDAE--FCNEVEIISNL-KHRNLV 372
+G G FG V + +D K+++S D + +E++I+S+L +H N+V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 373 PLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLF---------PSFNDGSGVAKRPLTW 423
L G C G ++ +Y G++ + L P+F +A L+
Sbjct: 114 NLLGACT------HGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAF----AIANSTLST 163
Query: 424 PQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSH 483
+ VA+G+A+L K I HRD+ A N+LL A++ DFGLA+ ++
Sbjct: 164 RDLLHFSSQVAQGMAFL--ASKNCI-HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNY 220
Query: 484 LTTRVAGTH-GYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLSTSGSPRACLIT 542
+ A ++APE T +SDV+S+G+++ EI L + P L+
Sbjct: 221 IVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI------FSLGLNPYP-GILVN 273
Query: 543 DWVWSLVKAGKVWQALDPSL 562
+ LVK G +Q P+
Sbjct: 274 SKFYKLVKDG--YQMAQPAF 291
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 95/211 (45%), Gaps = 26/211 (12%)
Query: 321 IGRGGFGLV---YKGILQDGTTVAVKKVIESDFQGDAEF---CNEVEIISNLKHRNLVPL 374
IG G G+V Y IL+ VA+KK + FQ E+ ++ + H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKK-LSRPFQNQTHAKRAYRELVLMKCVNHKNIIGL 88
Query: 375 RGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVA 434
E + Y+V + M + N+ V + L + ++ +
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELM-DANL-----------CQVIQMELDHERMSYLLYQML 136
Query: 435 KGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGY 494
G+ +LH I HRD+K +NI++ +D ++ DFGLA+ + G S + T Y
Sbjct: 137 CGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMEPEVVTRYY 191
Query: 495 LAPEYALYGQLTEKSDVYSFGVVILEIMCGR 525
APE L E D++S G ++ E++C +
Sbjct: 192 RAPEVILGMGYKENVDLWSVGCIMGEMVCHK 222
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 106/239 (44%), Gaps = 34/239 (14%)
Query: 305 IQDLERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQG-------DAEFC 357
I +L ++ + FI G +G V G+ +G VA+K+V + G D+ C
Sbjct: 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLC 73
Query: 358 N----EVEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDG 413
E+ ++++ H N++ LR V + + YLV + M L +D
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRD-IFVHFEEPAMHKLYLVTELMRTD-----LAQVIHD- 126
Query: 414 SGVAKRPLTWPQR-KNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFG 472
+R + PQ + + + GL LH + + HRD+ NILL + + DF
Sbjct: 127 ----QRIVISPQHIQYFMYHILLGLHVLH---EAGVVHRDLHPGNILLADNNDITICDFN 179
Query: 473 LAKQ--SREGQSHLTTRVAGTHGYLAPEYAL-YGQLTEKSDVYSFGVVILEIMCGRKAL 528
LA++ + ++H T Y APE + + T+ D++S G V+ E M RKAL
Sbjct: 180 LAREDTADANKTHYVTH----RWYRAPELVMQFKGFTKLVDMWSAGCVMAE-MFNRKAL 233
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 97/221 (43%), Gaps = 25/221 (11%)
Query: 313 DKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQGDA---EFCNEVEIISNLKH 368
D F +G+G FG VY Q+ +A+K + +S + + + E+EI S+L+H
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKN 428
N++ + D +R YL+ ++ P G + L G +R T+
Sbjct: 75 PNILRMYNYF---HDRKRI---YLMLEFAPRGELYKELQ---KHGRFDEQRSATF----- 120
Query: 429 IILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRV 488
+ ++A L Y H + + HRDIK N+L+ ++ADFG S S +
Sbjct: 121 -MEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGW---SVHAPSLRRRXM 173
Query: 489 AGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALD 529
GT YL PE EK D++ GV+ E + G D
Sbjct: 174 CGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 97/221 (43%), Gaps = 25/221 (11%)
Query: 313 DKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQGDA---EFCNEVEIISNLKH 368
D F +G+G FG VY Q+ +A+K + +S + + + E+EI S+L+H
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKN 428
N++ + D +R YL+ ++ P G + L G +R T+
Sbjct: 74 PNILRMYNYF---HDRKRI---YLMLEFAPRGELYKELQ---KHGRFDEQRSATF----- 119
Query: 429 IILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRV 488
+ ++A L Y H + + HRDIK N+L+ ++ADFG S S +
Sbjct: 120 -MEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGW---SVHAPSLRRRXM 172
Query: 489 AGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALD 529
GT YL PE EK D++ GV+ E + G D
Sbjct: 173 CGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 91/210 (43%), Gaps = 32/210 (15%)
Query: 321 IGRGGFGLVYKGILQ-----DGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPLR 375
+G G FG V KG Q V + K +D E E ++ L + +V +
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 376 GCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAK 435
G C LV + G ++ +L V + + ++ V+
Sbjct: 95 GIC-------EAESWMLVMEMAELGPLNKYL----QQNRHVKDKNII-----ELVHQVSM 138
Query: 436 GLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHG-- 493
G+ YL + HRD+ A N+LL A+++DFGL+K R +++ A THG
Sbjct: 139 GMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK---AQTHGKW 192
Query: 494 ---YLAPEYALYGQLTEKSDVYSFGVVILE 520
+ APE Y + + KSDV+SFGV++ E
Sbjct: 193 PVKWYAPECINYYKFSSKSDVWSFGVLMWE 222
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 91/210 (43%), Gaps = 32/210 (15%)
Query: 321 IGRGGFGLVYKGILQ-----DGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPLR 375
+G G FG V KG Q V + K +D E E ++ L + +V +
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 376 GCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAK 435
G C LV + G ++ +L V + + ++ V+
Sbjct: 95 GIC-------EAESWMLVMEMAELGPLNKYL----QQNRHVKDKNII-----ELVHQVSM 138
Query: 436 GLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHG-- 493
G+ YL + HRD+ A N+LL A+++DFGL+K R +++ A THG
Sbjct: 139 GMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK---AQTHGKW 192
Query: 494 ---YLAPEYALYGQLTEKSDVYSFGVVILE 520
+ APE Y + + KSDV+SFGV++ E
Sbjct: 193 PVKWYAPECINYYKFSSKSDVWSFGVLMWE 222
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 91/210 (43%), Gaps = 32/210 (15%)
Query: 321 IGRGGFGLVYKGILQ-----DGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPLR 375
+G G FG V KG Q V + K +D E E ++ L + +V +
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74
Query: 376 GCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAK 435
G C LV + G ++ +L V + + ++ V+
Sbjct: 75 GIC-------EAESWMLVMEMAELGPLNKYL----QQNRHVKDKNII-----ELVHQVSM 118
Query: 436 GLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHG-- 493
G+ YL + HRD+ A N+LL A+++DFGL+K R +++ A THG
Sbjct: 119 GMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK---AQTHGKW 172
Query: 494 ---YLAPEYALYGQLTEKSDVYSFGVVILE 520
+ APE Y + + KSDV+SFGV++ E
Sbjct: 173 PVKWYAPECINYYKFSSKSDVWSFGVLMWE 202
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 91/210 (43%), Gaps = 32/210 (15%)
Query: 321 IGRGGFGLVYKGILQ-----DGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPLR 375
+G G FG V KG Q V + K +D E E ++ L + +V +
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 376 GCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAK 435
G C LV + G ++ +L V + + ++ V+
Sbjct: 79 GIC-------EAESWMLVMEMAELGPLNKYL----QQNRHVKDKNII-----ELVHQVSM 122
Query: 436 GLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHG-- 493
G+ YL + HRD+ A N+LL A+++DFGL+K R +++ A THG
Sbjct: 123 GMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK---AQTHGKW 176
Query: 494 ---YLAPEYALYGQLTEKSDVYSFGVVILE 520
+ APE Y + + KSDV+SFGV++ E
Sbjct: 177 PVKWYAPECINYYKFSSKSDVWSFGVLMWE 206
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 26/209 (12%)
Query: 321 IGRGGFGLVYKGIL---QDGTTVAVKKVIESDFQGDAE-FCNEVEIISNLKHRNLVPLRG 376
+G G FG V +G+ + VA+K + + + D E E +I+ L + +V L G
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 377 CCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRP-LTWPQRKNIILDVAK 435
C + LV + G + L V KR + ++ V+
Sbjct: 404 VCQAEA-------LMLVMEMAGGGPLHKFL---------VGKREEIPVSNVAELLHQVSM 447
Query: 436 GLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTH--G 493
G+ YL + HR++ A N+LL A+++DFGL+K S+ T R AG
Sbjct: 448 GMKYLE---EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLK 504
Query: 494 YLAPEYALYGQLTEKSDVYSFGVVILEIM 522
+ APE + + + +SDV+S+GV + E +
Sbjct: 505 WYAPECINFRKFSSRSDVWSYGVTMWEAL 533
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 91/210 (43%), Gaps = 32/210 (15%)
Query: 321 IGRGGFGLVYKGILQ-----DGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPLR 375
+G G FG V KG Q V + K +D E E ++ L + +V +
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 72
Query: 376 GCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAK 435
G C LV + G ++ +L V + + ++ V+
Sbjct: 73 GIC-------EAESWMLVMEMAELGPLNKYL----QQNRHVKDKNII-----ELVHQVSM 116
Query: 436 GLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHG-- 493
G+ YL + HRD+ A N+LL A+++DFGL+K R +++ A THG
Sbjct: 117 GMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK---AQTHGKW 170
Query: 494 ---YLAPEYALYGQLTEKSDVYSFGVVILE 520
+ APE Y + + KSDV+SFGV++ E
Sbjct: 171 PVKWYAPECINYYKFSSKSDVWSFGVLMWE 200
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 91/210 (43%), Gaps = 32/210 (15%)
Query: 321 IGRGGFGLVYKGILQ-----DGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPLR 375
+G G FG V KG Q V + K +D E E ++ L + +V +
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 84
Query: 376 GCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAK 435
G C LV + G ++ +L V + + ++ V+
Sbjct: 85 GIC-------EAESWMLVMEMAELGPLNKYL----QQNRHVKDKNII-----ELVHQVSM 128
Query: 436 GLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHG-- 493
G+ YL + HRD+ A N+LL A+++DFGL+K R +++ A THG
Sbjct: 129 GMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK---AQTHGKW 182
Query: 494 ---YLAPEYALYGQLTEKSDVYSFGVVILE 520
+ APE Y + + KSDV+SFGV++ E
Sbjct: 183 PVKWYAPECINYYKFSSKSDVWSFGVLMWE 212
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 91/210 (43%), Gaps = 32/210 (15%)
Query: 321 IGRGGFGLVYKGILQ-----DGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPLR 375
+G G FG V KG Q V + K +D E E ++ L + +V +
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 92
Query: 376 GCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAK 435
G C LV + G ++ +L V + + ++ V+
Sbjct: 93 GIC-------EAESWMLVMEMAELGPLNKYL----QQNRHVKDKNII-----ELVHQVSM 136
Query: 436 GLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHG-- 493
G+ YL + HRD+ A N+LL A+++DFGL+K R +++ A THG
Sbjct: 137 GMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK---AQTHGKW 190
Query: 494 ---YLAPEYALYGQLTEKSDVYSFGVVILE 520
+ APE Y + + KSDV+SFGV++ E
Sbjct: 191 PVKWYAPECINYYKFSSKSDVWSFGVLMWE 220
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 26/208 (12%)
Query: 321 IGRGGFGLV---YKGILQDGTTVAVKKVIESDFQGDAEF---CNEVEIISNLKHRNLVPL 374
IG G G+V Y +L VA+KK + FQ E+ ++ + H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKK-LSRPFQNQTHAKRAYRELVLMKXVNHKNIISL 88
Query: 375 RGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVA 434
E + YLV + M + N+ V + L + ++ +
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELM-DANL-----------CQVIQMELDHERMSYLLYQML 136
Query: 435 KGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGY 494
G+ +LH I HRD+K +NI++ +D ++ DFGLA+ + G S + T T Y
Sbjct: 137 CGIKHLHSA---GIIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRYY 191
Query: 495 LAPEYALYGQLTEKSDVYSFGVVILEIM 522
APE L E D++S G ++ E++
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 81/177 (45%), Gaps = 28/177 (15%)
Query: 353 DAEFCNEVEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFP--SF 410
+++ EV ++ L H N++ L E YLV + G + D + F
Sbjct: 80 NSKLLEEVAVLKLLDHPNIMKLYDFF------EDKRNYYLVMECYKGGELFDEIIHRMKF 133
Query: 411 NDGSGVAKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDA---DMRAR 467
N+ II V G+ YLH K I HRD+K N+LL++ D +
Sbjct: 134 NEVDAAV-----------IIKQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIK 179
Query: 468 VADFGLAKQSREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
+ DFGL+ E Q + R+ GT Y+APE L + EK DV+S GV++ ++ G
Sbjct: 180 IVDFGLS-AVFENQKKMKERL-GTAYYIAPE-VLRKKYDEKCDVWSIGVILFILLAG 233
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 98/222 (44%), Gaps = 31/222 (13%)
Query: 312 TDKFSQKNFIGRGGFGLVYK------GILQDGTTVAVKKVIESDFQGDAEFCNEVEIISN 365
TD++ +G+G F +V + G + KK+ D Q + E I
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQ---KLEREARICRL 59
Query: 366 LKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQ 425
LKH N+V L D +E G YLV+D + G + F D VA+ +
Sbjct: 60 LKHPNIVRLH-----DSISEEGF-HYLVFDLVTGGEL-------FEDI--VAREYYSEAD 104
Query: 426 RKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRA---RVADFGLAKQSREGQS 482
+ I + + + + H I HRD+K N+LL + + ++ADFGLA + +G
Sbjct: 105 ASHCIQQILESVNHCHLN---GIVHRDLKPENLLLASKSKGAAVKLADFGLAIEV-QGDQ 160
Query: 483 HLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
AGT GYL+PE + D+++ GV++ ++ G
Sbjct: 161 QAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 100/216 (46%), Gaps = 25/216 (11%)
Query: 315 FSQKNFIGRGGFG---LVYKGILQDGTTVAVKKVIES---DFQGDAEFCNEVEIISNLKH 368
F +G+G FG LV K D + KV++ + E +I++++ H
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNH 89
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKN 428
+V L +G + YL+ D++ G+ LF + + T K
Sbjct: 90 PFVVKLHYAFQTEG------KLYLILDFLRGGD----LFTRLS-----KEVMFTEEDVKF 134
Query: 429 IILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRV 488
+ ++A GL +LH I +RD+K NILLD + ++ DFGL+K++ + + +
Sbjct: 135 YLAELALGLDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYS-F 190
Query: 489 AGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
GT Y+APE + +D +S+GV++ E++ G
Sbjct: 191 CGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 106/242 (43%), Gaps = 48/242 (19%)
Query: 313 DKFSQKNFIGRGGFGLVYKGILQ-DGTTVAVKKVIE--SDFQGDAEFCNEVEIISNLKHR 369
D++ ++ IG G +G V + + + VA+KK++ D E+ I++ L H
Sbjct: 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHD 112
Query: 370 NLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRP--LTWPQRK 427
++V + V+ D E+ E Y+V + + +D + + P LT K
Sbjct: 113 HVVKVLDI-VIPKDVEKFDELYVVLEI------------ADSDFKKLFRTPVYLTELHIK 159
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAK------------ 475
++ ++ G+ Y+H I HRD+K N L++ D +V DFGLA+
Sbjct: 160 TLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQL 216
Query: 476 --QSREGQSHLTT---------RVAG---THGYLAPEYALYGQ-LTEKSDVYSFGVVILE 520
RE +L T ++ G T Y APE L + TE DV+S G + E
Sbjct: 217 PISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAE 276
Query: 521 IM 522
++
Sbjct: 277 LL 278
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 98/222 (44%), Gaps = 31/222 (13%)
Query: 312 TDKFSQKNFIGRGGFGLVYK------GILQDGTTVAVKKVIESDFQGDAEFCNEVEIISN 365
TD++ +G+G F +V + G + KK+ D Q + E I
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQ---KLEREARICRL 59
Query: 366 LKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQ 425
LKH N+V L D +E G YLV+D + G + F D VA+ +
Sbjct: 60 LKHPNIVRLH-----DSISEEGF-HYLVFDLVTGGEL-------FEDI--VAREYYSEAD 104
Query: 426 RKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRA---RVADFGLAKQSREGQS 482
+ I + + + + H I HRD+K N+LL + + ++ADFGLA + +G
Sbjct: 105 ASHCIQQILESVNHCHLN---GIVHRDLKPENLLLASKSKGAAVKLADFGLAIEV-QGDQ 160
Query: 483 HLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
AGT GYL+PE + D+++ GV++ ++ G
Sbjct: 161 QAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Query: 432 DVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGT 491
++ L YLH + +RDIK N++LD D ++ DFGL K+ + + T GT
Sbjct: 113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGT 168
Query: 492 HGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGR 525
YLAPE D + GVV+ E+MCGR
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Query: 432 DVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGT 491
++ L YLH + +RDIK N++LD D ++ DFGL K+ + + T GT
Sbjct: 113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGT 168
Query: 492 HGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGR 525
YLAPE D + GVV+ E+MCGR
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 432 DVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQ-SREGQSHLTTRVAG 490
++ L YLH I HRD+K NILL+ DM ++ DFG AK S E + G
Sbjct: 118 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 174
Query: 491 THGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
T Y++PE + SD+++ G +I +++ G
Sbjct: 175 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 432 DVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQ-SREGQSHLTTRVAG 490
++ L YLH I HRD+K NILL+ DM ++ DFG AK S E + G
Sbjct: 117 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 173
Query: 491 THGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
T Y++PE + SD+++ G +I +++ G
Sbjct: 174 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Query: 432 DVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGT 491
++ L YLH + +RDIK N++LD D ++ DFGL K+ + + T GT
Sbjct: 116 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGT 171
Query: 492 HGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGR 525
YLAPE D + GVV+ E+MCGR
Sbjct: 172 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 432 DVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQ-SREGQSHLTTRVAG 490
++ L YLH I HRD+K NILL+ DM ++ DFG AK S E + G
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 491 THGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
T Y++PE + SD+++ G +I +++ G
Sbjct: 197 TAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 26/208 (12%)
Query: 321 IGRGGFGLV---YKGILQDGTTVAVKKVIESDFQGDAEF---CNEVEIISNLKHRNLVPL 374
IG G G+V Y +L VA+KK + FQ E+ ++ + H+N++ L
Sbjct: 70 IGSGAQGIVCAAYDAVLD--RNVAIKK-LSRPFQNQTHAKRAYRELVLMKCVNHKNIISL 126
Query: 375 RGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVA 434
E + YLV + M + N+ V + L + ++ +
Sbjct: 127 LNVFTPQKTLEEFQDVYLVMELM-DANL-----------CQVIQMELDHERMSYLLYQML 174
Query: 435 KGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGY 494
G+ +LH I HRD+K +NI++ +D ++ DFGLA+ + G S + T T Y
Sbjct: 175 CGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYY 229
Query: 495 LAPEYALYGQLTEKSDVYSFGVVILEIM 522
APE L E D++S G ++ E++
Sbjct: 230 RAPEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 432 DVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQ-SREGQSHLTTRVAG 490
++ L YLH I HRD+K NILL+ DM ++ DFG AK S E + G
Sbjct: 116 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 172
Query: 491 THGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
T Y++PE + SD+++ G +I +++ G
Sbjct: 173 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 432 DVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQ-SREGQSHLTTRVAG 490
++ L YLH I HRD+K NILL+ DM ++ DFG AK S E + G
Sbjct: 115 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 171
Query: 491 THGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
T Y++PE + SD+++ G +I +++ G
Sbjct: 172 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 109/229 (47%), Gaps = 34/229 (14%)
Query: 310 RATDKFSQKNFIGRGGFGLVYKGILQD-GTTVAVKKVIESDFQGDAEFCN-EVEIISN-- 365
+ D+F + G+G FG V G + G +VA+KKVI+ D F N E++I+ +
Sbjct: 20 KEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQ-----DPRFRNRELQIMQDLA 74
Query: 366 -LKHRNLVPLRGCCVVDGDNERGSERYL--VYDYMPNGNVDDHLFPSFNDGSGVAKRPLT 422
L H N+V L+ G+ +R + YL V +Y+P+ H VA P+
Sbjct: 75 VLHHPNIVQLQSYFYTLGERDR-RDIYLNVVMEYVPDTL---HRCCRNYYRRQVAPPPIL 130
Query: 423 WPQRKNIILDVAKGLAYLHYGVKPAIY--HRDIKATNILL-DADMRARVADFGLAKQ--- 476
K + + + + LH P++ HRDIK N+L+ +AD ++ DFG AK+
Sbjct: 131 I---KVFLFQLIRSIGCLHL---PSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSP 184
Query: 477 SREGQSHLTTRVAGTHGYLAPEYALYGQ-LTEKSDVYSFGVVILEIMCG 524
S +++ +R Y APE Q T D++S G + E+M G
Sbjct: 185 SEPNVAYICSRY-----YRAPELIFGNQHYTTAVDIWSVGCIFAEMMLG 228
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 96/217 (44%), Gaps = 26/217 (11%)
Query: 314 KFSQKNFIGRGGFGLV---YKGILQDGTTVAVKKVIESDFQGDAEF---CNEVEIISNLK 367
++ Q IG G G+V + +L G VAVKK + FQ E+ ++ +
Sbjct: 23 RYQQLKPIGSGAQGIVCAAFDTVL--GINVAVKK-LSRPFQNQTHAKRAYRELVLLKCVN 79
Query: 368 HRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRK 427
H+N++ L E + YLV + M + N+ V L +
Sbjct: 80 HKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANL-----------CQVIHMELDHERMS 127
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
++ + G+ +LH I HRD+K +NI++ +D ++ DFGLA+ + + + T
Sbjct: 128 YLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--STNFMMTP 182
Query: 488 VAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
T Y APE L E D++S G ++ E++ G
Sbjct: 183 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 26/208 (12%)
Query: 321 IGRGGFGLV---YKGILQDGTTVAVKKVIESDFQGDAEF---CNEVEIISNLKHRNLVPL 374
IG G G+V Y +L VA+KK + FQ E+ ++ + H+N++ L
Sbjct: 33 IGSGAQGIVCAAYDAVL--DRNVAIKK-LSRPFQNQTHAKRAYRELVLMKCVNHKNIISL 89
Query: 375 RGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVA 434
E + YLV + M + N+ V + L + ++ +
Sbjct: 90 LNVFTPQKTLEEFQDVYLVMELM-DANL-----------CQVIQMELDHERMSYLLYQML 137
Query: 435 KGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGY 494
G+ +LH I HRD+K +NI++ +D ++ DFGLA+ + G S + T T Y
Sbjct: 138 CGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYY 192
Query: 495 LAPEYALYGQLTEKSDVYSFGVVILEIM 522
APE L E D++S G ++ E++
Sbjct: 193 RAPEVILGMGYKENVDIWSVGCIMGEMV 220
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 26/208 (12%)
Query: 321 IGRGGFGLV---YKGILQDGTTVAVKKVIESDFQGDAEF---CNEVEIISNLKHRNLVPL 374
IG G G+V Y +L VA+KK + FQ E+ ++ + H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKK-LSRPFQNQTHAKRAYRELVLMKCVNHKNIISL 88
Query: 375 RGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVA 434
E + YLV + M + N+ V + L + ++ +
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELM-DANL-----------CQVIQMELDHERMSYLLYQML 136
Query: 435 KGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGY 494
G+ +LH I HRD+K +NI++ +D ++ DFGLA+ + G S + T T Y
Sbjct: 137 CGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYY 191
Query: 495 LAPEYALYGQLTEKSDVYSFGVVILEIM 522
APE L E D++S G ++ E++
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 58/114 (50%), Gaps = 4/114 (3%)
Query: 418 KRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQS 477
++ LT P+ + + + G YLH + + HRD+K N+ L+ D+ ++ DFGLA +
Sbjct: 109 RKALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV 165
Query: 478 REGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLS 531
E + GT Y+APE + + DV+S G ++ ++ G+ + S
Sbjct: 166 -EYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 218
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 26/208 (12%)
Query: 321 IGRGGFGLV---YKGILQDGTTVAVKKVIESDFQGDAEF---CNEVEIISNLKHRNLVPL 374
IG G G+V Y +L VA+KK + FQ E+ ++ + H+N++ L
Sbjct: 31 IGSGAQGIVCAAYDAVL--DRNVAIKK-LSRPFQNQTHAKRAYRELVLMKCVNHKNIISL 87
Query: 375 RGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVA 434
E + YLV + M + N+ V + L + ++ +
Sbjct: 88 LNVFTPQKTLEEFQDVYLVMELM-DANL-----------CQVIQMELDHERMSYLLYQML 135
Query: 435 KGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGY 494
G+ +LH I HRD+K +NI++ +D ++ DFGLA+ + G S + T T Y
Sbjct: 136 CGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYY 190
Query: 495 LAPEYALYGQLTEKSDVYSFGVVILEIM 522
APE L E D++S G ++ E++
Sbjct: 191 RAPEVILGMGYKENVDIWSVGCIMGEMV 218
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 77/151 (50%), Gaps = 24/151 (15%)
Query: 355 EFCNEVEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNV---DDHLFPSFN 411
+F NE++II+++K+ C +G E Y++Y+YM N ++ D++ F
Sbjct: 89 DFKNELQIITDIKNE------YCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVL-- 140
Query: 412 DGSGVAKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADF 471
D + P+ K II V +Y+H + I HRD+K +NIL+D + R +++DF
Sbjct: 141 DKNYTCFIPIQVI--KCIIKSVLNSFSYIH--NEKNICHRDVKPSNILMDKNGRVKLSDF 196
Query: 472 GLAKQSREGQSHLTTRVAGTHG---YLAPEY 499
G E + + ++ G+ G ++ PE+
Sbjct: 197 G------ESEYMVDKKIKGSRGTYEFMPPEF 221
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 103/238 (43%), Gaps = 36/238 (15%)
Query: 299 GSIWFKIQDLERATDKFSQKNFIGRGGFGLVYKGILQDGT------TVAVKKVIESDFQG 352
G F+ +D+E D + +G G F +V K Q GT K+ + S +G
Sbjct: 1 GMSTFRQEDVE---DHYEMGEELGSGQFAIVRK-CRQKGTGKEYAAKFIKKRRLSSSRRG 56
Query: 353 --DAEFCNEVEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSF 410
E EV I+ ++H N++ L E ++ L+ + + G + D L
Sbjct: 57 VSREEIEREVNILREIRHPNIITLHDIF------ENKTDVVLILELVSGGELFDFL---- 106
Query: 411 NDGSGVAKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNI-LLDADM---RA 466
K LT + + + G+ YLH I H D+K NI LLD ++ R
Sbjct: 107 -----AEKESLTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRI 158
Query: 467 RVADFGLAKQSREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
++ DFG+A + G + GT ++APE Y L ++D++S GV+ ++ G
Sbjct: 159 KLIDFGIAHKIEAGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 432 DVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQ-SREGQSHLTTRVAG 490
++ L YLH I HRD+K NILL+ DM ++ DFG AK S E + G
Sbjct: 138 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 194
Query: 491 THGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
T Y++PE + SD+++ G +I +++ G
Sbjct: 195 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 432 DVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQ-SREGQSHLTTRVAG 490
++ L YLH I HRD+K NILL+ DM ++ DFG AK S E + G
Sbjct: 145 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 201
Query: 491 THGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
T Y++PE + SD+++ G +I +++ G
Sbjct: 202 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 58/114 (50%), Gaps = 4/114 (3%)
Query: 418 KRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQS 477
++ LT P+ + + + G YLH + + HRD+K N+ L+ D+ ++ DFGLA +
Sbjct: 135 RKALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV 191
Query: 478 REGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLS 531
E + GT Y+APE + + DV+S G ++ ++ G+ + S
Sbjct: 192 -EYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 244
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 432 DVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQ-SREGQSHLTTRVAG 490
++ L YLH I HRD+K NILL+ DM ++ DFG AK S E + G
Sbjct: 122 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 178
Query: 491 THGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
T Y++PE + SD+++ G +I +++ G
Sbjct: 179 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 26/208 (12%)
Query: 321 IGRGGFGLV---YKGILQDGTTVAVKKVIESDFQGDAEF---CNEVEIISNLKHRNLVPL 374
IG G G+V Y +L VA+KK + FQ E+ ++ + H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKK-LSRPFQNQTHAKRAYRELVLMKCVNHKNIISL 88
Query: 375 RGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVA 434
E + YLV + M + N+ V + L + ++ +
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELM-DANL-----------CQVIQMELDHERMSYLLYQML 136
Query: 435 KGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGY 494
G+ +LH I HRD+K +NI++ +D ++ DFGLA+ + G S + T T Y
Sbjct: 137 CGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYY 191
Query: 495 LAPEYALYGQLTEKSDVYSFGVVILEIM 522
APE L E D++S G ++ E++
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 432 DVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQ-SREGQSHLTTRVAG 490
++ L YLH I HRD+K NILL+ DM ++ DFG AK S E + G
Sbjct: 138 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 194
Query: 491 THGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
T Y++PE + SD+++ G +I +++ G
Sbjct: 195 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 432 DVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQ-SREGQSHLTTRVAG 490
++ L YLH I HRD+K NILL+ DM ++ DFG AK S E + G
Sbjct: 141 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVG 197
Query: 491 THGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
T Y++PE + SD+++ G +I +++ G
Sbjct: 198 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 58/114 (50%), Gaps = 4/114 (3%)
Query: 418 KRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQS 477
++ LT P+ + + + G YLH + + HRD+K N+ L+ D+ ++ DFGLA +
Sbjct: 133 RKALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV 189
Query: 478 REGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLS 531
E + GT Y+APE + + DV+S G ++ ++ G+ + S
Sbjct: 190 -EYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 242
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 97/223 (43%), Gaps = 27/223 (12%)
Query: 315 FSQKNFIGRGGFGLVYKGILQ-DGTTVAVKKVIESDFQGDA-EFCNEVEIISNLKHRNLV 372
F K+ +G G +G+V + G VA+KK+ D A E++I+ + KH N++
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENII 72
Query: 373 PLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILD 432
+ D E +E Y++ + M D H ++ + L+ + I
Sbjct: 73 TIFNIQRPDS-FENFNEVYIIQELM---QTDLH--------RVISTQMLSDDHIQYFIYQ 120
Query: 433 VAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSRE---------GQSH 483
+ + LH + HRD+K +N+L++++ +V DFGLA+ E GQ
Sbjct: 121 TLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQS 177
Query: 484 LTTRVAGTHGYLAPEYALY-GQLTEKSDVYSFGVVILEIMCGR 525
T Y APE L + + DV+S G ++ E+ R
Sbjct: 178 GMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 90/210 (42%), Gaps = 32/210 (15%)
Query: 321 IGRGGFGLVYKGILQ-----DGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPLR 375
+G G FG V KG Q V + K +D E E ++ L + +V +
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 376 GCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAK 435
G C LV + G ++ +L V + + ++ V+
Sbjct: 79 GIC-------EAESWMLVMEMAELGPLNKYL----QQNRHVKDKNII-----ELVHQVSM 122
Query: 436 GLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHG-- 493
G+ YL + HRD+ A N+LL A+++DFGL+K R ++ A THG
Sbjct: 123 GMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYK---AQTHGKW 176
Query: 494 ---YLAPEYALYGQLTEKSDVYSFGVVILE 520
+ APE Y + + KSDV+SFGV++ E
Sbjct: 177 PVKWYAPECINYYKFSSKSDVWSFGVLMWE 206
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 432 DVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQ-SREGQSHLTTRVAG 490
++ L YLH I HRD+K NILL+ DM ++ DFG AK S E + G
Sbjct: 141 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 197
Query: 491 THGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
T Y++PE + SD+++ G +I +++ G
Sbjct: 198 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 432 DVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQ-SREGQSHLTTRVAG 490
++ L YLH I HRD+K NILL+ DM ++ DFG AK S E + G
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 491 THGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
T Y++PE + SD+++ G +I +++ G
Sbjct: 197 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 432 DVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQ-SREGQSHLTTRVAG 490
++ L YLH I HRD+K NILL+ DM ++ DFG AK S E + G
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 491 THGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
T Y++PE + SD+++ G +I +++ G
Sbjct: 197 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 432 DVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQ-SREGQSHLTTRVAG 490
++ L YLH I HRD+K NILL+ DM ++ DFG AK S E + G
Sbjct: 138 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 194
Query: 491 THGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
T Y++PE + SD+++ G +I +++ G
Sbjct: 195 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 432 DVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQ-SREGQSHLTTRVAG 490
++ L YLH I HRD+K NILL+ DM ++ DFG AK S E + G
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 491 THGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
T Y++PE + SD+++ G +I +++ G
Sbjct: 197 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 26/208 (12%)
Query: 321 IGRGGFGLV---YKGILQDGTTVAVKKVIESDFQGDAEF---CNEVEIISNLKHRNLVPL 374
IG G G+V Y +L VA+KK + FQ E+ ++ + H+N++ L
Sbjct: 25 IGSGAQGIVCAAYDAVL--DRNVAIKK-LSRPFQNQTHAKRAYRELVLMKCVNHKNIISL 81
Query: 375 RGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVA 434
E + YLV + M + N+ V + L + ++ +
Sbjct: 82 LNVFTPQKTLEEFQDVYLVMELM-DANL-----------CQVIQMELDHERMSYLLYQML 129
Query: 435 KGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGY 494
G+ +LH I HRD+K +NI++ +D ++ DFGLA+ + G S + T T Y
Sbjct: 130 CGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYY 184
Query: 495 LAPEYALYGQLTEKSDVYSFGVVILEIM 522
APE L E D++S G ++ E++
Sbjct: 185 RAPEVILGMGYKENVDIWSVGCIMGEMV 212
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 92/210 (43%), Gaps = 32/210 (15%)
Query: 321 IGRGGFGLVYKGILQ-----DGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPLR 375
+G G FG V KG Q V + K +D E E ++ L + +V +
Sbjct: 377 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 436
Query: 376 GCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAK 435
G C + LV + G ++ +L V + + ++ V+
Sbjct: 437 GICEAES-------WMLVMEMAELGPLNKYL----QQNRHVKDKNII-----ELVHQVSM 480
Query: 436 GLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHG-- 493
G+ YL + HRD+ A N+LL A+++DFGL+K R +++ A THG
Sbjct: 481 GMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK---AQTHGKW 534
Query: 494 ---YLAPEYALYGQLTEKSDVYSFGVVILE 520
+ APE Y + + KSDV+SFGV++ E
Sbjct: 535 PVKWYAPECINYYKFSSKSDVWSFGVLMWE 564
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 26/208 (12%)
Query: 321 IGRGGFGLV---YKGILQDGTTVAVKKVIESDFQGDAEF---CNEVEIISNLKHRNLVPL 374
IG G G+V Y +L VA+KK + FQ E+ ++ + H+N++ L
Sbjct: 26 IGSGAQGIVCAAYDAVL--DRNVAIKK-LSRPFQNQTHAKRAYRELVLMKCVNHKNIISL 82
Query: 375 RGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVA 434
E + YLV + M + N+ V + L + ++ +
Sbjct: 83 LNVFTPQKTLEEFQDVYLVMELM-DANL-----------CQVIQMELDHERMSYLLYQML 130
Query: 435 KGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGY 494
G+ +LH I HRD+K +NI++ +D ++ DFGLA+ + G S + T T Y
Sbjct: 131 CGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYY 185
Query: 495 LAPEYALYGQLTEKSDVYSFGVVILEIM 522
APE L E D++S G ++ E++
Sbjct: 186 RAPEVILGMGYKENVDIWSVGCIMGEMV 213
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 90/215 (41%), Gaps = 23/215 (10%)
Query: 315 FSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDF----QGDAEFCNEVEIISNLKHRN 370
FS IGRGGFG VY D + K ++ QG+ NE I+ +L
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNE-RIMLSLVSTG 249
Query: 371 LVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNII 430
P C + + D M G++ HL GV II
Sbjct: 250 DCPFIVCMSYAFHT--PDKLSFILDLMNGGDLHYHL-----SQHGVFSEADMRFYAAEII 302
Query: 431 LDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAG 490
L GL ++H + +RD+K NILLD R++D GLA + + H + G
Sbjct: 303 L----GLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---G 352
Query: 491 THGYLAPEYALYGQLTEKS-DVYSFGVVILEIMCG 524
THGY+APE G + S D +S G ++ +++ G
Sbjct: 353 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 90/215 (41%), Gaps = 23/215 (10%)
Query: 315 FSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDF----QGDAEFCNEVEIISNLKHRN 370
FS IGRGGFG VY D + K ++ QG+ NE I+ +L
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNE-RIMLSLVSTG 249
Query: 371 LVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNII 430
P C + + D M G++ HL GV II
Sbjct: 250 DCPFIVCMSYAFHT--PDKLSFILDLMNGGDLHYHL-----SQHGVFSEADMRFYAAEII 302
Query: 431 LDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAG 490
L GL ++H + +RD+K NILLD R++D GLA + + H + G
Sbjct: 303 L----GLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---G 352
Query: 491 THGYLAPEYALYGQLTEKS-DVYSFGVVILEIMCG 524
THGY+APE G + S D +S G ++ +++ G
Sbjct: 353 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 432 DVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQ-SREGQSHLTTRVAG 490
++ L YLH I HRD+K NILL+ DM ++ DFG AK S E + G
Sbjct: 137 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVG 193
Query: 491 THGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
T Y++PE + SD+++ G +I +++ G
Sbjct: 194 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 432 DVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQ-SREGQSHLTTRVAG 490
++ L YLH I HRD+K NILL+ DM ++ DFG AK S E + G
Sbjct: 137 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 193
Query: 491 THGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
T Y++PE + SD+++ G +I +++ G
Sbjct: 194 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 26/208 (12%)
Query: 321 IGRGGFGLV---YKGILQDGTTVAVKKVIESDFQGDAEF---CNEVEIISNLKHRNLVPL 374
IG G G+V Y +L VA+KK + FQ E+ ++ + H+N++ L
Sbjct: 33 IGSGAQGIVCAAYDAVL--DRNVAIKK-LSRPFQNQTHAKRAYRELVLMKCVNHKNIISL 89
Query: 375 RGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVA 434
E + YLV + M + N+ V + L + ++ +
Sbjct: 90 LNVFTPQKTLEEFQDVYLVMELM-DANL-----------CQVIQMELDHERMSYLLYQML 137
Query: 435 KGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGY 494
G+ +LH I HRD+K +NI++ +D ++ DFGLA+ + G S + T T Y
Sbjct: 138 CGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYY 192
Query: 495 LAPEYALYGQLTEKSDVYSFGVVILEIM 522
APE L E D++S G ++ E++
Sbjct: 193 RAPEVILGMGYKENVDIWSVGCIMGEMV 220
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 432 DVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQ-SREGQSHLTTRVAG 490
++ L YLH I HRD+K NILL+ DM ++ DFG AK S E + G
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 491 THGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
T Y++PE + SD+++ G +I +++ G
Sbjct: 197 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 432 DVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQ-SREGQSHLTTRVAG 490
++ L YLH I HRD+K NILL+ DM ++ DFG AK S E + G
Sbjct: 143 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 199
Query: 491 THGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
T Y++PE + SD+++ G +I +++ G
Sbjct: 200 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 26/208 (12%)
Query: 321 IGRGGFGLV---YKGILQDGTTVAVKKVIESDFQGDAEF---CNEVEIISNLKHRNLVPL 374
IG G G+V Y +L VA+KK + FQ E+ ++ + H+N++ L
Sbjct: 26 IGSGAQGIVCAAYDAVL--DRNVAIKK-LSRPFQNQTHAKRAYRELVLMKCVNHKNIISL 82
Query: 375 RGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVA 434
E + YLV + M + N+ V + L + ++ +
Sbjct: 83 LNVFTPQKTLEEFQDVYLVMELM-DANL-----------CQVIQMELDHERMSYLLYQML 130
Query: 435 KGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGY 494
G+ +LH I HRD+K +NI++ +D ++ DFGLA+ + G S + T T Y
Sbjct: 131 CGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYY 185
Query: 495 LAPEYALYGQLTEKSDVYSFGVVILEIM 522
APE L E D++S G ++ E++
Sbjct: 186 RAPEVILGMGYKENVDIWSVGCIMGEMV 213
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 92/223 (41%), Gaps = 40/223 (17%)
Query: 313 DKFSQKNFIGRGGFGLV-----------YKGILQDGTTVAVKKVIESDFQGDAEFCNEVE 361
D+F + IG G FG V Y + D V K IE NE
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-------LNEKR 93
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
I+ + LV L DN S Y+V +Y+P G + HL + +
Sbjct: 94 ILQAVNFPFLVKLEFSF---KDN---SNLYMVMEYVPGGEMFSHL-------RRIGR--F 138
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
+ P + + YLH + +RD+K N+L+D +VADFG AK+ + G+
Sbjct: 139 SEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK-GR 194
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
T + GT YLAPE L + D ++ GV+I E+ G
Sbjct: 195 ---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 26/208 (12%)
Query: 321 IGRGGFGLV---YKGILQDGTTVAVKKVIESDFQGDAEF---CNEVEIISNLKHRNLVPL 374
IG G G+V Y +L VA+KK + FQ E+ ++ + H+N++ L
Sbjct: 70 IGSGAQGIVCAAYDAVL--DRNVAIKK-LSRPFQNQTHAKRAYRELVLMKCVNHKNIISL 126
Query: 375 RGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVA 434
E + YLV + M + N+ V + L + ++ +
Sbjct: 127 LNVFTPQKTLEEFQDVYLVMELM-DANL-----------CQVIQMELDHERMSYLLYQML 174
Query: 435 KGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGY 494
G+ +LH I HRD+K +NI++ +D ++ DFGLA+ + G S + T T Y
Sbjct: 175 CGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYY 229
Query: 495 LAPEYALYGQLTEKSDVYSFGVVILEIM 522
APE L E D++S G ++ E++
Sbjct: 230 RAPEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 432 DVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQ-SREGQSHLTTRVAG 490
++ L YLH I HRD+K NILL+ DM ++ DFG AK S E + G
Sbjct: 138 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVG 194
Query: 491 THGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
T Y++PE + SD+++ G +I +++ G
Sbjct: 195 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 26/210 (12%)
Query: 321 IGRGGFGLV---YKGILQDGTTVAVKKVIESDFQGDAEF---CNEVEIISNLKHRNLVPL 374
IG G G+V Y IL+ VA+KK + FQ E+ ++ + H+N++ L
Sbjct: 34 IGSGAQGIVCAAYDAILE--RNVAIKK-LSRPFQNQTHAKRAYRELVLMKCVNHKNIIGL 90
Query: 375 RGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVA 434
E + Y+V + M + N+ V + L + ++ +
Sbjct: 91 LNVFTPQKSLEEFQDVYIVMELM-DANL-----------CQVIQMELDHERMSYLLYQML 138
Query: 435 KGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGY 494
G+ +LH I HRD+K +NI++ +D ++ DFGLA+ + G S + T Y
Sbjct: 139 CGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMVPFVVTRYY 193
Query: 495 LAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
APE L E D++S G ++ E++ G
Sbjct: 194 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 92/210 (43%), Gaps = 32/210 (15%)
Query: 321 IGRGGFGLVYKGILQ-----DGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPLR 375
+G G FG V KG Q V + K +D E E ++ L + +V +
Sbjct: 378 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 437
Query: 376 GCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAK 435
G C + LV + G ++ +L V + + ++ V+
Sbjct: 438 GICEAES-------WMLVMEMAELGPLNKYL----QQNRHVKDKNII-----ELVHQVSM 481
Query: 436 GLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHG-- 493
G+ YL + HRD+ A N+LL A+++DFGL+K R +++ A THG
Sbjct: 482 GMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK---AQTHGKW 535
Query: 494 ---YLAPEYALYGQLTEKSDVYSFGVVILE 520
+ APE Y + + KSDV+SFGV++ E
Sbjct: 536 PVKWYAPECINYYKFSSKSDVWSFGVLMWE 565
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 99/213 (46%), Gaps = 24/213 (11%)
Query: 316 SQKNFIGRGGFGLVYK-GILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPL 374
S+ +G G FG V+K G +A K + + E NE+ +++ L H NL+ L
Sbjct: 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQL 151
Query: 375 RGCCVVDGDNERGSERYLVYDYMPNGNVDDHLF-PSFNDGSGVAKRPLTWPQRKNIILDV 433
E ++ LV +Y+ G + D + S+N LT + +
Sbjct: 152 YDAF------ESKNDIVLVMEYVDGGELFDRIIDESYN---------LTELDTILFMKQI 196
Query: 434 AKGLAYLHYGVKPAIYHRDIKATNIL-LDADMRA-RVADFGLAKQSREGQSHLTTRVAGT 491
+G+ ++H + I H D+K NIL ++ D + ++ DFGLA++ + + GT
Sbjct: 197 CEGIRHMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVN--FGT 251
Query: 492 HGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
+LAPE Y ++ +D++S GV+ ++ G
Sbjct: 252 PEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSG 284
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 98/217 (45%), Gaps = 32/217 (14%)
Query: 321 IGRGGFGLVYKGI-LQDGTTVAVK----KVI-ESDFQGDAEFCNEVEIISNLKHRNLVPL 374
+G G FG V G VA+K KV+ +SD QG E E+ + L+H +++ L
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKL 78
Query: 375 RGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVA 434
+ E +V +Y N LF V + ++ + + +
Sbjct: 79 YDVI------KSKDEIIMVIEYAGN-----ELFDYI-----VQRDKMSEQEARRFFQQII 122
Query: 435 KGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGY 494
+ Y H + I HRD+K N+LLD + ++ADFGL+ +G T+ G+ Y
Sbjct: 123 SAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--CGSPNY 177
Query: 495 LAPEYALYGQLTE--KSDVYSFGVVILEIMCGRKALD 529
APE + G+L + DV+S GV++ ++C R D
Sbjct: 178 AAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 213
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 90/215 (41%), Gaps = 23/215 (10%)
Query: 315 FSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDF----QGDAEFCNEVEIISNLKHRN 370
FS IGRGGFG VY D + K ++ QG+ NE I+ +L
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNE-RIMLSLVSTG 249
Query: 371 LVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNII 430
P C + + D M G++ HL GV II
Sbjct: 250 DCPFIVCMSYAFHT--PDKLSFILDLMNGGDLHYHL-----SQHGVFSEADMRFYAAEII 302
Query: 431 LDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAG 490
L GL ++H + +RD+K NILLD R++D GLA + + H + G
Sbjct: 303 L----GLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---G 352
Query: 491 THGYLAPEYALYGQLTEKS-DVYSFGVVILEIMCG 524
THGY+APE G + S D +S G ++ +++ G
Sbjct: 353 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 90/215 (41%), Gaps = 23/215 (10%)
Query: 315 FSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDF----QGDAEFCNEVEIISNLKHRN 370
FS IGRGGFG VY D + K ++ QG+ NE I+ +L
Sbjct: 190 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNE-RIMLSLVSTG 248
Query: 371 LVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNII 430
P C + + D M G++ HL GV II
Sbjct: 249 DCPFIVCMSYAFHT--PDKLSFILDLMNGGDLHYHL-----SQHGVFSEADMRFYAAEII 301
Query: 431 LDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAG 490
L GL ++H + +RD+K NILLD R++D GLA + + H + G
Sbjct: 302 L----GLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---G 351
Query: 491 THGYLAPEYALYGQLTEKS-DVYSFGVVILEIMCG 524
THGY+APE G + S D +S G ++ +++ G
Sbjct: 352 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 386
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 98/217 (45%), Gaps = 32/217 (14%)
Query: 321 IGRGGFGLVYKGI-LQDGTTVAVK----KVI-ESDFQGDAEFCNEVEIISNLKHRNLVPL 374
+G G FG V G VA+K KV+ +SD QG E E+ + L+H +++ L
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKL 79
Query: 375 RGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVA 434
+ E +V +Y N LF V + ++ + + +
Sbjct: 80 YDVI------KSKDEIIMVIEYAGN-----ELFDYI-----VQRDKMSEQEARRFFQQII 123
Query: 435 KGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGY 494
+ Y H + I HRD+K N+LLD + ++ADFGL+ +G T+ G+ Y
Sbjct: 124 SAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--CGSPNY 178
Query: 495 LAPEYALYGQLTE--KSDVYSFGVVILEIMCGRKALD 529
APE + G+L + DV+S GV++ ++C R D
Sbjct: 179 AAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 214
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 98/218 (44%), Gaps = 29/218 (13%)
Query: 313 DKFSQKNFIGRGGFGLVYKGILQDGT-TVAVKKVIESDFQGDA---EFCNEVEIISNLKH 368
D F +G+G FG VY + VA+K + +S + + + E+EI ++L H
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKN 428
N++ L D R YL+ +Y P G + L ++ T+ +++
Sbjct: 83 PNILRLYNYFY---DRRRI---YLILEYAPRGELYKEL-----------QKSCTFDEQRT 125
Query: 429 --IILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTT 486
I+ ++A L Y H G K + HRDIK N+LL ++ADFG S S
Sbjct: 126 ATIMEELADALMYCH-GKK--VIHRDIKPENLLLGLKGELKIADFGW---SVHAPSLRRK 179
Query: 487 RVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
+ GT YL PE EK D++ GV+ E++ G
Sbjct: 180 TMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVG 217
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 98/217 (45%), Gaps = 32/217 (14%)
Query: 321 IGRGGFGLVYKGI-LQDGTTVAVK----KVI-ESDFQGDAEFCNEVEIISNLKHRNLVPL 374
+G G FG V G VA+K KV+ +SD QG E E+ + L+H +++ L
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKL 69
Query: 375 RGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVA 434
+ E +V +Y N LF V + ++ + + +
Sbjct: 70 YDVI------KSKDEIIMVIEYAGN-----ELFDYI-----VQRDKMSEQEARRFFQQII 113
Query: 435 KGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGY 494
+ Y H + I HRD+K N+LLD + ++ADFGL+ +G T+ G+ Y
Sbjct: 114 SAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--CGSPNY 168
Query: 495 LAPEYALYGQLTE--KSDVYSFGVVILEIMCGRKALD 529
APE + G+L + DV+S GV++ ++C R D
Sbjct: 169 AAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 204
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 115/260 (44%), Gaps = 40/260 (15%)
Query: 321 IGRGGFGLVYKGIL-----QDGTTVAVKKVIESDFQGDAE--FCNEVEIISNL-KHRNLV 372
+G G FG V + +D K+++S D + +E++I+S+L +H N+V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 373 PLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLF---------PSFNDGSGVAKRPLTW 423
L G C G ++ +Y G++ + L P+F +A +
Sbjct: 114 NLLGACT------HGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAF----AIANSTAST 163
Query: 424 PQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSH 483
+ VA+G+A+L K I HRD+ A N+LL A++ DFGLA+ ++
Sbjct: 164 RDLLHFSSQVAQGMAFL--ASKNCI-HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNY 220
Query: 484 LTTRVAGTH-GYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLSTSGSPRACLIT 542
+ A ++APE T +SDV+S+G+++ EI L + P L+
Sbjct: 221 IVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI------FSLGLNPYP-GILVN 273
Query: 543 DWVWSLVKAGKVWQALDPSL 562
+ LVK G +Q P+
Sbjct: 274 SKFYKLVKDG--YQMAQPAF 291
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 93/217 (42%), Gaps = 46/217 (21%)
Query: 321 IGRGGFGLVYKGILQDGTTVAV-------KKVIESDFQGDAEFCNEVEIISNLKHRNLV- 372
IGRG F VYKG L TTV V +K+ +S+ Q F E E + L+H N+V
Sbjct: 34 IGRGSFKTVYKG-LDTETTVEVAWCELQDRKLTKSERQ---RFKEEAEXLKGLQHPNIVR 89
Query: 373 -------PLRGC-CVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWP 424
++G C+V LV + +G + +L F R +W
Sbjct: 90 FYDSWESTVKGKKCIV-----------LVTELXTSGTLKTYL-KRFKVXKIKVLR--SWC 135
Query: 425 QRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADM-RARVADFGLAKQSREGQSH 483
++ + KGL +LH P I HRD+K NI + ++ D GLA R +
Sbjct: 136 RQ------ILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR---AS 185
Query: 484 LTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILE 520
V GT + APE + E DVY+FG LE
Sbjct: 186 FAKAVIGTPEFXAPE-XYEEKYDESVDVYAFGXCXLE 221
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 99/235 (42%), Gaps = 34/235 (14%)
Query: 310 RATDKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKH 368
R F + +G+G FG V K D A+KK+ ++ + + +EV ++++L H
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE-EKLSTILSEVXLLASLNH 61
Query: 369 RNLV-------PLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
+ +V R ++ S ++ +Y N + D L S N +R
Sbjct: 62 QYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYD-LIHSENLNQ---QRDE 117
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAK------ 475
W + I+ + L+Y+H I HR++K NI +D ++ DFGLAK
Sbjct: 118 YWRLFRQIL----EALSYIH---SQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSL 170
Query: 476 -------QSREGQSHLTTRVAGTHGYLAPEYAL-YGQLTEKSDVYSFGVVILEIM 522
Q+ G S T GT Y+A E G EK D YS G++ E +
Sbjct: 171 DILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 98/217 (45%), Gaps = 32/217 (14%)
Query: 321 IGRGGFGLVYKGI-LQDGTTVAVK----KVI-ESDFQGDAEFCNEVEIISNLKHRNLVPL 374
+G G FG V G VA+K KV+ +SD QG E E+ + L+H +++ L
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKL 73
Query: 375 RGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVA 434
+ E +V +Y N LF V + ++ + + +
Sbjct: 74 YDVI------KSKDEIIMVIEYAGN-----ELFDYI-----VQRDKMSEQEARRFFQQII 117
Query: 435 KGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGY 494
+ Y H + I HRD+K N+LLD + ++ADFGL+ +G T+ G+ Y
Sbjct: 118 SAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--CGSPNY 172
Query: 495 LAPEYALYGQLTE--KSDVYSFGVVILEIMCGRKALD 529
APE + G+L + DV+S GV++ ++C R D
Sbjct: 173 AAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 208
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 53/102 (51%), Gaps = 8/102 (7%)
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
I L K L +L +K I HRDIK +NILLD ++ DFG++ Q + S TR
Sbjct: 129 KITLATVKALNHLKENLK--IIHRDIKPSNILLDRSGNIKLCDFGISGQLVD--SIAKTR 184
Query: 488 VAGTHGYLAPEY----ALYGQLTEKSDVYSFGVVILEIMCGR 525
AG Y+APE A +SDV+S G+ + E+ GR
Sbjct: 185 DAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGR 226
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 48/96 (50%), Gaps = 8/96 (8%)
Query: 432 DVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTT--RVA 489
++ L YLH + +RDIK N++LD D ++ DFGL K EG S T
Sbjct: 118 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFC 171
Query: 490 GTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGR 525
GT YLAPE D + GVV+ E+MCGR
Sbjct: 172 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 48/96 (50%), Gaps = 8/96 (8%)
Query: 432 DVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTT--RVA 489
++ L YLH + +RDIK N++LD D ++ DFGL K EG S T
Sbjct: 113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFC 166
Query: 490 GTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGR 525
GT YLAPE D + GVV+ E+MCGR
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 48/96 (50%), Gaps = 8/96 (8%)
Query: 432 DVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTT--RVA 489
++ L YLH + +RDIK N++LD D ++ DFGL K EG S T
Sbjct: 113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFC 166
Query: 490 GTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGR 525
GT YLAPE D + GVV+ E+MCGR
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 48/96 (50%), Gaps = 8/96 (8%)
Query: 432 DVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTT--RVA 489
++ L YLH + +RDIK N++LD D ++ DFGL K EG S T
Sbjct: 113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFC 166
Query: 490 GTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGR 525
GT YLAPE D + GVV+ E+MCGR
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 98/215 (45%), Gaps = 23/215 (10%)
Query: 315 FSQKNFIGR---GGFGLVYKGILQ-DGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRN 370
F Q NF+ + G ++KG Q + V V KV + + +F E + H N
Sbjct: 9 FKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPN 68
Query: 371 LVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNII 430
++P+ G C + L+ +MP G+ L+ ++G+ + Q
Sbjct: 69 VLPVLGAC----QSPPAPHPTLITHWMPYGS----LYNVLHEGTNFV---VDQSQAVKFA 117
Query: 431 LDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARV--ADFGLAKQSREGQSHLTTRV 488
LD+A+G+A+LH ++P I + + ++++D DM AR+ AD + QS G+ + V
Sbjct: 118 LDMARGMAFLH-TLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQS-PGRMYAPAWV 175
Query: 489 AGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMC 523
A PE +D++SF V++ E++
Sbjct: 176 APEALQKKPE----DTNRRSADMWSFAVLLWELVT 206
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 90/208 (43%), Gaps = 23/208 (11%)
Query: 320 FIGRGGFGLVYKGILQ----DGTTVAVKKVIES-DFQGDAEFCNEVEIISNLKHRNLVPL 374
+G G FG VY+G+ + VAVK + +F +E I+ NL H ++V L
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 78
Query: 375 RGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVA 434
G +++ + P G + +L + N + + LT L +
Sbjct: 79 IGII-------EEEPTWIIMELYPYGELGHYLERNKN-----SLKVLTLVLYS---LQIC 123
Query: 435 KGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGY 494
K +AYL HRDI NIL+ + ++ DFGL++ + + + +
Sbjct: 124 KAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKW 180
Query: 495 LAPEYALYGQLTEKSDVYSFGVVILEIM 522
++PE + + T SDV+ F V + EI+
Sbjct: 181 MSPESINFRRFTTASDVWMFAVCMWEIL 208
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 90/208 (43%), Gaps = 23/208 (11%)
Query: 320 FIGRGGFGLVYKGILQ----DGTTVAVKKVIES-DFQGDAEFCNEVEIISNLKHRNLVPL 374
+G G FG VY+G+ + VAVK + +F +E I+ NL H ++V L
Sbjct: 31 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 90
Query: 375 RGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVA 434
G +++ + P G + +L + N + + LT L +
Sbjct: 91 IGII-------EEEPTWIIMELYPYGELGHYLERNKN-----SLKVLTLVLYS---LQIC 135
Query: 435 KGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGY 494
K +AYL HRDI NIL+ + ++ DFGL++ + + + +
Sbjct: 136 KAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKW 192
Query: 495 LAPEYALYGQLTEKSDVYSFGVVILEIM 522
++PE + + T SDV+ F V + EI+
Sbjct: 193 MSPESINFRRFTTASDVWMFAVCMWEIL 220
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 88/208 (42%), Gaps = 23/208 (11%)
Query: 320 FIGRGGFGLVYKGILQ----DGTTVAVKKVIES-DFQGDAEFCNEVEIISNLKHRNLVPL 374
+G G FG VY+G+ + VAVK + +F +E I+ NL H ++V L
Sbjct: 15 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 74
Query: 375 RGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVA 434
G +++ + P G + +L + N + + L +
Sbjct: 75 IGII-------EEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYS--------LQIC 119
Query: 435 KGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGY 494
K +AYL HRDI NIL+ + ++ DFGL++ + + + +
Sbjct: 120 KAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKW 176
Query: 495 LAPEYALYGQLTEKSDVYSFGVVILEIM 522
++PE + + T SDV+ F V + EI+
Sbjct: 177 MSPESINFRRFTTASDVWMFAVCMWEIL 204
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 92/218 (42%), Gaps = 26/218 (11%)
Query: 313 DKFSQKNF-----IGRGGFGLVYK-GILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNL 366
+ F Q++F +G G +G V+K +DG AVK+ + S F+G + ++ + +
Sbjct: 52 ESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSM-SPFRGPKDRARKLAEVGSH 110
Query: 367 KHRNLVPLRGCCV-VDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQ 425
+ P CCV ++ E G YL + PS L Q
Sbjct: 111 EKVGQHP---CCVRLEQAWEEGGILYLQTEL---------CGPSLQQHCEAWGASLPEAQ 158
Query: 426 RKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLT 485
+ D LA+LH + H D+K NI L R ++ DFGL + G +
Sbjct: 159 VWGYLRDTLLALAHLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVEL--GTAGAG 213
Query: 486 TRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMC 523
G Y+APE L G +DV+S G+ ILE+ C
Sbjct: 214 EVQEGDPRYMAPEL-LQGSYGTAADVFSLGLTILEVAC 250
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 424 PQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSH 483
P K +V L YLH I +RD+K NILLD + ++ DFG AK +
Sbjct: 106 PVAKFYAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD---- 158
Query: 484 LTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
+T + GT Y+APE + D +SFG++I E++ G
Sbjct: 159 VTYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAG 199
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 57/99 (57%), Gaps = 6/99 (6%)
Query: 432 DVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQS-REGQSHLTTRVAG 490
++A GL +L I +RD+K N++LD++ ++ADFG+ K++ +G + T G
Sbjct: 450 EIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT--TKXFCG 504
Query: 491 THGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALD 529
T Y+APE Y + D ++FGV++ E++ G+ +
Sbjct: 505 TPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFE 543
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 57/99 (57%), Gaps = 6/99 (6%)
Query: 432 DVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSR-EGQSHLTTRVAG 490
++A GL +L I +RD+K N++LD++ ++ADFG+ K++ +G + T G
Sbjct: 129 EIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT--TKXFCG 183
Query: 491 THGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALD 529
T Y+APE Y + D ++FGV++ E++ G+ +
Sbjct: 184 TPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFE 222
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 96/227 (42%), Gaps = 31/227 (13%)
Query: 309 ERATDKFSQKNFIGRGGFGLVYK-----GILQDGTTVAVKKVIESDFQG--DAEFCNEVE 361
E D + +G G F +V K LQ K+ +S +G + EV
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
I+ ++H N++ L E ++ L+ + + G + D L K L
Sbjct: 67 ILKEIQHPNVITLHEVY------ENKTDVILILELVAGGELFDFL---------AEKESL 111
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNI-LLDADM---RARVADFGLAKQS 477
T + + + G+ YLH I H D+K NI LLD ++ R ++ DFGLA +
Sbjct: 112 TEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
Query: 478 REGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
G + GT ++APE Y L ++D++S GV+ ++ G
Sbjct: 169 DFGNEF--KNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 96/224 (42%), Gaps = 33/224 (14%)
Query: 313 DKFSQKNFIGRGGFGLVYKGILQDGT------TVAVKKVIESDFQG--DAEFCNEVEIIS 364
D + +G G F +V K Q GT K+ + S +G E EV I+
Sbjct: 5 DHYEMGEELGSGQFAIVRK-CRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILR 63
Query: 365 NLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWP 424
++H N++ L E ++ L+ + + G + D L K LT
Sbjct: 64 EIRHPNIITLHDIF------ENKTDVVLILELVSGGELFDFL---------AEKESLTED 108
Query: 425 QRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNI-LLDADM---RARVADFGLAKQSREG 480
+ + + G+ YLH I H D+K NI LLD ++ R ++ DFG+A + G
Sbjct: 109 EATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG 165
Query: 481 QSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
+ GT ++APE Y L ++D++S GV+ ++ G
Sbjct: 166 NEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 207
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 96/224 (42%), Gaps = 33/224 (14%)
Query: 313 DKFSQKNFIGRGGFGLVYKGILQDGT------TVAVKKVIESDFQG--DAEFCNEVEIIS 364
D + +G G F +V K Q GT K+ + S +G E EV I+
Sbjct: 26 DHYEMGEELGSGQFAIVRK-CRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILR 84
Query: 365 NLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWP 424
++H N++ L E ++ L+ + + G + D L K LT
Sbjct: 85 EIRHPNIITLHDIF------ENKTDVVLILELVSGGELFDFL---------AEKESLTED 129
Query: 425 QRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNI-LLDADM---RARVADFGLAKQSREG 480
+ + + G+ YLH I H D+K NI LLD ++ R ++ DFG+A + G
Sbjct: 130 EATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG 186
Query: 481 QSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
+ GT ++APE Y L ++D++S GV+ ++ G
Sbjct: 187 NEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 228
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 95/217 (43%), Gaps = 26/217 (11%)
Query: 314 KFSQKNFIGRGGFGLV---YKGILQDGTTVAVKKVIESDFQGDAEF---CNEVEIISNLK 367
++ Q IG G G+V + +L G VAVKK + FQ E+ ++ +
Sbjct: 25 RYQQLKPIGSGAQGIVCAAFDTVL--GINVAVKK-LSRPFQNQTHAKRAYRELVLLKCVN 81
Query: 368 HRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRK 427
H+N++ L E + YLV + M + N+ V L +
Sbjct: 82 HKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANL-----------CQVIHMELDHERMS 129
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
++ + G+ +LH I HRD+K +NI++ +D ++ DFGLA+ + + + T
Sbjct: 130 YLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--CTNFMMTP 184
Query: 488 VAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
T Y APE L D++S G ++ E++ G
Sbjct: 185 YVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 87/213 (40%), Gaps = 33/213 (15%)
Query: 321 IGRGGFGLVYKGILQ--DGTTVAVK-KVIESDFQGDAE----FCNEVEIISNLKHRNLVP 373
+G G FG+V +G G TV+V K ++ D E F EV + +L HRNL+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 374 LRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGS---GVAKRPLTWPQRKNII 430
L G + +V + P G++ D L + G G R
Sbjct: 76 LYGVVLT-------PPMKMVTELAPLGSLLDRL--RKHQGHFLLGTLSR---------YA 117
Query: 431 LDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSH--LTTRV 488
+ VA+G+ YL HRD+ A N+LL ++ DFGL + + H +
Sbjct: 118 VQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHR 174
Query: 489 AGTHGYLAPEYALYGQLTEKSDVYSFGVVILEI 521
+ APE + SD + FGV + E+
Sbjct: 175 KVPFAWCAPESLKTRTFSHASDTWMFGVTLWEM 207
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 91/223 (40%), Gaps = 40/223 (17%)
Query: 313 DKFSQKNFIGRGGFGLV-----------YKGILQDGTTVAVKKVIESDFQGDAEFCNEVE 361
D+F + +G G FG V Y + D V K IE NE
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT-------LNEKR 86
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
I+ + LV L DN S Y+V +Y+P G + HL + +
Sbjct: 87 ILQAVNFPFLVKLEFSF---KDN---SNLYMVMEYVPGGEMFSHL-------RRIGR--F 131
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
+ P + + YLH + +RD+K N+L+D +V DFG AK+ + G+
Sbjct: 132 SEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GR 187
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
T + GT YLAPE L + D ++ GV+I E+ G
Sbjct: 188 ---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 53/106 (50%), Gaps = 14/106 (13%)
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAK---QSREGQSHL 484
+I + +A+ + +LH + HRD+K +NI D +V DFGL Q E Q+ L
Sbjct: 168 HIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVL 224
Query: 485 TTRVA--------GTHGYLAPEYALYGQLTEKSDVYSFGVVILEIM 522
T A GT Y++PE + K D++S G+++ E++
Sbjct: 225 TPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 87/213 (40%), Gaps = 33/213 (15%)
Query: 321 IGRGGFGLVYKGILQ--DGTTVAVK-KVIESDFQGDAE----FCNEVEIISNLKHRNLVP 373
+G G FG+V +G G TV+V K ++ D E F EV + +L HRNL+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 374 LRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGS---GVAKRPLTWPQRKNII 430
L G + +V + P G++ D L + G G R
Sbjct: 80 LYGVVLT-------PPMKMVTELAPLGSLLDRL--RKHQGHFLLGTLSR---------YA 121
Query: 431 LDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSH--LTTRV 488
+ VA+G+ YL HRD+ A N+LL ++ DFGL + + H +
Sbjct: 122 VQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHR 178
Query: 489 AGTHGYLAPEYALYGQLTEKSDVYSFGVVILEI 521
+ APE + SD + FGV + E+
Sbjct: 179 KVPFAWCAPESLKTRTFSHASDTWMFGVTLWEM 211
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 87/213 (40%), Gaps = 33/213 (15%)
Query: 321 IGRGGFGLVYKGILQ--DGTTVAVK-KVIESDFQGDAE----FCNEVEIISNLKHRNLVP 373
+G G FG+V +G G TV+V K ++ D E F EV + +L HRNL+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 374 LRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGS---GVAKRPLTWPQRKNII 430
L G + +V + P G++ D L + G G R
Sbjct: 76 LYGVVLT-------PPMKMVTELAPLGSLLDRL--RKHQGHFLLGTLSR---------YA 117
Query: 431 LDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSH--LTTRV 488
+ VA+G+ YL HRD+ A N+LL ++ DFGL + + H +
Sbjct: 118 VQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHR 174
Query: 489 AGTHGYLAPEYALYGQLTEKSDVYSFGVVILEI 521
+ APE + SD + FGV + E+
Sbjct: 175 KVPFAWCAPESLKTRTFSHASDTWMFGVTLWEM 207
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 91/223 (40%), Gaps = 40/223 (17%)
Query: 313 DKFSQKNFIGRGGFGLV-----------YKGILQDGTTVAVKKVIESDFQGDAEFCNEVE 361
D+F + +G G FG V Y + D V K IE NE
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-------LNEKR 79
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
I+ + LV L DN S Y+V +Y+P G + HL + +
Sbjct: 80 ILQAVNFPFLVKLEFSF---KDN---SNLYMVMEYVPGGEMFSHL-------RRIGR--F 124
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
+ P + + YLH + +RD+K N+L+D +V DFG AK+ + G+
Sbjct: 125 SEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GR 180
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
T + GT YLAPE L + D ++ GV+I E+ G
Sbjct: 181 ---TWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 220
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 87/213 (40%), Gaps = 33/213 (15%)
Query: 321 IGRGGFGLVYKGILQ--DGTTVAVK-KVIESDFQGDAE----FCNEVEIISNLKHRNLVP 373
+G G FG+V +G G TV+V K ++ D E F EV + +L HRNL+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 374 LRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGS---GVAKRPLTWPQRKNII 430
L G + +V + P G++ D L + G G R
Sbjct: 76 LYGVVLT-------PPMKMVTELAPLGSLLDRL--RKHQGHFLLGTLSR---------YA 117
Query: 431 LDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSH--LTTRV 488
+ VA+G+ YL HRD+ A N+LL ++ DFGL + + H +
Sbjct: 118 VQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHR 174
Query: 489 AGTHGYLAPEYALYGQLTEKSDVYSFGVVILEI 521
+ APE + SD + FGV + E+
Sbjct: 175 KVPFAWCAPESLKTRTFSHASDTWMFGVTLWEM 207
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 61/133 (45%), Gaps = 24/133 (18%)
Query: 411 NDGSGVAKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVAD 470
D G K P+T + VA+G+ +L HRD+ A NILL + ++ D
Sbjct: 186 EDSDGFYKEPITMEDLISYSFQVARGMEFLS---SRKCIHRDLAARNILLSENNVVKICD 242
Query: 471 FGLAKQ-------SREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMC 523
FGLA+ R+G + L + ++APE + KSDV+S+GV++ EI
Sbjct: 243 FGLARDIYKNPDYVRKGDTRLPLK------WMAPESIFDKIYSTKSDVWSYGVLLWEI-- 294
Query: 524 GRKALDLSTSGSP 536
S GSP
Sbjct: 295 ------FSLGGSP 301
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 87/213 (40%), Gaps = 33/213 (15%)
Query: 321 IGRGGFGLVYKGILQ--DGTTVAVK-KVIESDFQGDAE----FCNEVEIISNLKHRNLVP 373
+G G FG+V +G G TV+V K ++ D E F EV + +L HRNL+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 374 LRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGS---GVAKRPLTWPQRKNII 430
L G + +V + P G++ D L + G G R
Sbjct: 86 LYGVVLT-------PPMKMVTELAPLGSLLDRL--RKHQGHFLLGTLSR---------YA 127
Query: 431 LDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSH--LTTRV 488
+ VA+G+ YL HRD+ A N+LL ++ DFGL + + H +
Sbjct: 128 VQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHR 184
Query: 489 AGTHGYLAPEYALYGQLTEKSDVYSFGVVILEI 521
+ APE + SD + FGV + E+
Sbjct: 185 KVPFAWCAPESLKTRTFSHASDTWMFGVTLWEM 217
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 97/227 (42%), Gaps = 24/227 (10%)
Query: 311 ATDKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQGDAEF-----CNEVEIIS 364
AT ++ IG G +G VYK G VA+K V + G EV ++
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 365 NLK---HRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
L+ H N+V L C +R + LV++++ D ++ D + P
Sbjct: 67 RLEAFEHPNVVRLMDVCAT-SRTDREIKVTLVFEHV------DQDLRTYLDKAPPPGLPA 119
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
K+++ +GL +LH I HRD+K NIL+ + ++ADFGLA+
Sbjct: 120 E--TIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLADFGLARIYSYQM 174
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKAL 528
+ T V T Y APE L D++S G + E M RK L
Sbjct: 175 A--LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAE-MFRRKPL 218
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 98/224 (43%), Gaps = 21/224 (9%)
Query: 311 ATDKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKV-IESDFQG-DAEFCNEVEIISNLK 367
AT ++ IG G +G VYK G VA+K V + + +G EV ++ L+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 368 ---HRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWP 424
H N+V L C +R + LV++++ D ++ D + P
Sbjct: 62 AFEHPNVVRLMDVCAT-SRTDREIKVTLVFEHV------DQDLRTYLDKAPPPGLPAE-- 112
Query: 425 QRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHL 484
K+++ +GL +LH I HRD+K NIL+ + ++ADFGLA+ +
Sbjct: 113 TIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALF 169
Query: 485 TTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKAL 528
V T Y APE L D++S G + E M RK L
Sbjct: 170 PVVV--TLWYRAPEVLLQSTYATPVDMWSVGCIFAE-MFRRKPL 210
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 96/227 (42%), Gaps = 31/227 (13%)
Query: 309 ERATDKFSQKNFIGRGGFGLVYK-----GILQDGTTVAVKKVIESDFQG--DAEFCNEVE 361
E D + +G G F +V K LQ K+ +S +G + EV
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
I+ ++H N++ L E ++ L+ + + G + D L K L
Sbjct: 67 ILKEIQHPNVITLHEVY------ENKTDVILILELVAGGELFDFL---------AEKESL 111
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNI-LLDADM---RARVADFGLAKQS 477
T + + + G+ YLH I H D+K NI LLD ++ R ++ DFGLA +
Sbjct: 112 TEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
Query: 478 REGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
G + GT ++APE Y L ++D++S GV+ ++ G
Sbjct: 169 DFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 98/224 (43%), Gaps = 21/224 (9%)
Query: 311 ATDKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKV-IESDFQG-DAEFCNEVEIISNLK 367
AT ++ IG G +G VYK G VA+K V + + +G EV ++ L+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 368 ---HRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWP 424
H N+V L C +R + LV++++ D ++ D + P
Sbjct: 62 AFEHPNVVRLMDVCAT-SRTDREIKVTLVFEHV------DQDLRTYLDKAPPPGLPAE-- 112
Query: 425 QRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHL 484
K+++ +GL +LH I HRD+K NIL+ + ++ADFGLA+ +
Sbjct: 113 TIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA-- 167
Query: 485 TTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKAL 528
V T Y APE L D++S G + E M RK L
Sbjct: 168 LAPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAE-MFRRKPL 210
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 87/213 (40%), Gaps = 33/213 (15%)
Query: 321 IGRGGFGLVYKGILQ--DGTTVAVK-KVIESDFQGDAE----FCNEVEIISNLKHRNLVP 373
+G G FG+V +G G TV+V K ++ D E F EV + +L HRNL+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 374 LRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGS---GVAKRPLTWPQRKNII 430
L G + +V + P G++ D L + G G R
Sbjct: 80 LYGVVLT-------PPMKMVTELAPLGSLLDRL--RKHQGHFLLGTLSR---------YA 121
Query: 431 LDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSH--LTTRV 488
+ VA+G+ YL HRD+ A N+LL ++ DFGL + + H +
Sbjct: 122 VQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHR 178
Query: 489 AGTHGYLAPEYALYGQLTEKSDVYSFGVVILEI 521
+ APE + SD + FGV + E+
Sbjct: 179 KVPFAWCAPESLKTRTFSHASDTWMFGVTLWEM 211
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 96/219 (43%), Gaps = 29/219 (13%)
Query: 313 DKFSQKNFIGRGGFGLVYKGILQD-GTTVAVKKVIESDFQGDAE--FCNEVEIISNLKHR 369
+K+ + IG G +G+V+K +D G VA+KK +ES+ + E+ ++ LKH
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHP 62
Query: 370 NLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQR--K 427
NLV L R +LV++Y + + H + G P+ K
Sbjct: 63 NLVNLLEVF------RRKRRLHLVFEYCDHTVL--HELDRYQRGV---------PEHLVK 105
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
+I + + + H K HRD+K NIL+ ++ DFG A+ +
Sbjct: 106 SITWQTLQAVNFCH---KHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDE 162
Query: 488 VAGTHGYLAPEYALYG--QLTEKSDVYSFGVVILEIMCG 524
VA T Y +PE L G Q DV++ G V E++ G
Sbjct: 163 VA-TRWYRSPE-LLVGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 91/223 (40%), Gaps = 40/223 (17%)
Query: 313 DKFSQKNFIGRGGFGLV-----------YKGILQDGTTVAVKKVIESDFQGDAEFCNEVE 361
D+F + +G G FG V Y + D V K IE NE
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHT-------LNEKR 93
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
I+ + LV L DN S Y+V +Y P G + HL + +
Sbjct: 94 ILQAVNFPFLVKLEFSF---KDN---SNLYMVMEYAPGGEMFSHL-------RRIGR--F 138
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
+ P + + YLH + +RD+K N+++D +V DFGLAK+ + G+
Sbjct: 139 SEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVK-GR 194
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
T + GT YLAPE L + D ++ GV+I E+ G
Sbjct: 195 ---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 96/227 (42%), Gaps = 31/227 (13%)
Query: 309 ERATDKFSQKNFIGRGGFGLVYK-----GILQDGTTVAVKKVIESDFQG--DAEFCNEVE 361
E D + +G G F +V K LQ K+ +S +G + EV
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
I+ ++H N++ L E ++ L+ + + G + D L K L
Sbjct: 67 ILKEIQHPNVITLHEVY------ENKTDVILILELVAGGELFDFL---------AEKESL 111
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNI-LLDADM---RARVADFGLAKQS 477
T + + + G+ YLH I H D+K NI LLD ++ R ++ DFGLA +
Sbjct: 112 TEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
Query: 478 REGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
G + GT ++APE Y L ++D++S GV+ ++ G
Sbjct: 169 DFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 96/227 (42%), Gaps = 31/227 (13%)
Query: 309 ERATDKFSQKNFIGRGGFGLVYK-----GILQDGTTVAVKKVIESDFQG--DAEFCNEVE 361
E D + +G G F +V K LQ K+ +S +G + EV
Sbjct: 7 ENVDDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
I+ ++H N++ L E ++ L+ + + G + D L K L
Sbjct: 67 ILKEIQHPNVITLHEVY------ENKTDVILILELVAGGELFDFL---------AEKESL 111
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNI-LLDADM---RARVADFGLAKQS 477
T + + + G+ YLH I H D+K NI LLD ++ R ++ DFGLA +
Sbjct: 112 TEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
Query: 478 REGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
G + GT ++APE Y L ++D++S GV+ ++ G
Sbjct: 169 DFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 87/213 (40%), Gaps = 33/213 (15%)
Query: 321 IGRGGFGLVYKGILQ--DGTTVAVK-KVIESDFQGDAE----FCNEVEIISNLKHRNLVP 373
+G G FG+V +G G TV+V K ++ D E F EV + +L HRNL+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 374 LRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGS---GVAKRPLTWPQRKNII 430
L G + +V + P G++ D L + G G R
Sbjct: 86 LYGVVLT-------PPMKMVTELAPLGSLLDRL--RKHQGHFLLGTLSR---------YA 127
Query: 431 LDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSH--LTTRV 488
+ VA+G+ YL HRD+ A N+LL ++ DFGL + + H +
Sbjct: 128 VQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHR 184
Query: 489 AGTHGYLAPEYALYGQLTEKSDVYSFGVVILEI 521
+ APE + SD + FGV + E+
Sbjct: 185 KVPFAWCAPESLKTRTFSHASDTWMFGVTLWEM 217
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 91/223 (40%), Gaps = 40/223 (17%)
Query: 313 DKFSQKNFIGRGGFGLV-----------YKGILQDGTTVAVKKVIESDFQGDAEFCNEVE 361
D+F + +G G FG V Y + D V K IE NE
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-------LNEKR 94
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
I+ + LV L DN S Y+V +Y+P G + HL + +
Sbjct: 95 ILQAVNFPFLVKLEFSF---KDN---SNLYMVMEYVPGGEMFSHL-------RRIGR--F 139
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
+ P + + YLH + +RD+K N+L+D +V DFG AK+ + G+
Sbjct: 140 SEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GR 195
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
T + GT YLAPE L + D ++ GV+I E+ G
Sbjct: 196 ---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 91/223 (40%), Gaps = 40/223 (17%)
Query: 313 DKFSQKNFIGRGGFGLV-----------YKGILQDGTTVAVKKVIESDFQGDAEFCNEVE 361
D+F + +G G FG V Y + D V K IE NE
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-------LNEKR 93
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
I+ + LV L DN S Y+V +Y+P G + HL + +
Sbjct: 94 ILQAVNFPFLVKLEFSF---KDN---SNLYMVMEYVPGGEMFSHL-------RRIGR--F 138
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
+ P + + YLH + +RD+K N+L+D +V DFG AK+ + G+
Sbjct: 139 SEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GR 194
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
T + GT YLAPE L + D ++ GV+I E+ G
Sbjct: 195 ---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 91/223 (40%), Gaps = 40/223 (17%)
Query: 313 DKFSQKNFIGRGGFGLV-----------YKGILQDGTTVAVKKVIESDFQGDAEFCNEVE 361
D+F + +G G FG V Y + D V K IE NE
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT-------LNEKR 94
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
I+ + LV L DN S Y+V +Y+P G + HL + +
Sbjct: 95 ILQAVNFPFLVKLEFSF---KDN---SNLYMVMEYVPGGEMFSHL-------RRIGR--F 139
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
+ P + + YLH + +RD+K N+L+D +V DFG AK+ + G+
Sbjct: 140 SEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GR 195
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
T + GT YLAPE L + D ++ GV+I E+ G
Sbjct: 196 ---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 91/223 (40%), Gaps = 40/223 (17%)
Query: 313 DKFSQKNFIGRGGFGLV-----------YKGILQDGTTVAVKKVIESDFQGDAEFCNEVE 361
D+F + +G G FG V Y + D V K IE NE
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT-------LNEKR 94
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
I+ + LV L DN S Y+V +Y+P G + HL + +
Sbjct: 95 ILQAVNFPFLVKLEFSF---KDN---SNLYMVMEYVPGGEMFSHL-------RRIGR--F 139
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
+ P + + YLH + +RD+K N+L+D +V DFG AK+ + G+
Sbjct: 140 SEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GR 195
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
T + GT YLAPE L + D ++ GV+I E+ G
Sbjct: 196 ---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 96/227 (42%), Gaps = 31/227 (13%)
Query: 309 ERATDKFSQKNFIGRGGFGLVYK-----GILQDGTTVAVKKVIESDFQG--DAEFCNEVE 361
E D + +G G F +V K LQ K+ +S +G + EV
Sbjct: 6 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 65
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
I+ ++H N++ L E ++ L+ + + G + D L K L
Sbjct: 66 ILKEIQHPNVITLHEVY------ENKTDVILILELVAGGELFDFL---------AEKESL 110
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNI-LLDADM---RARVADFGLAKQS 477
T + + + G+ YLH I H D+K NI LLD ++ R ++ DFGLA +
Sbjct: 111 TEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 167
Query: 478 REGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
G + GT ++APE Y L ++D++S GV+ ++ G
Sbjct: 168 DFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 91/223 (40%), Gaps = 40/223 (17%)
Query: 313 DKFSQKNFIGRGGFGLV-----------YKGILQDGTTVAVKKVIESDFQGDAEFCNEVE 361
D+F + +G G FG V Y + D V K IE NE
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT-------LNEKR 94
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
I+ + LV L DN S Y+V +Y+P G + HL + +
Sbjct: 95 ILQAVNFPFLVKLEFSF---KDN---SNLYMVMEYVPGGEMFSHL-------RRIGR--F 139
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
+ P + + YLH + +RD+K N+L+D +V DFG AK+ + G+
Sbjct: 140 SEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GR 195
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
T + GT YLAPE L + D ++ GV+I E+ G
Sbjct: 196 ---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 91/223 (40%), Gaps = 40/223 (17%)
Query: 313 DKFSQKNFIGRGGFGLV-----------YKGILQDGTTVAVKKVIESDFQGDAEFCNEVE 361
D+F + +G G FG V Y + D V K IE NE
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-------LNEKR 94
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
I+ + LV L DN S Y+V +Y+P G + HL + +
Sbjct: 95 ILQAVNFPFLVKLEFSF---KDN---SNLYMVMEYVPGGEMFSHL-------RRIGR--F 139
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
+ P + + YLH + +RD+K N+L+D +V DFG AK+ + G+
Sbjct: 140 SEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GR 195
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
T + GT YLAPE L + D ++ GV+I E+ G
Sbjct: 196 ---TWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 91/223 (40%), Gaps = 40/223 (17%)
Query: 313 DKFSQKNFIGRGGFGLV-----------YKGILQDGTTVAVKKVIESDFQGDAEFCNEVE 361
D+F + +G G FG V Y + D V K IE NE
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-------LNEKR 93
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
I+ + LV L DN S Y+V +Y+P G + HL + +
Sbjct: 94 ILQAVNFPFLVKLEFSF---KDN---SNLYMVMEYVPGGEMFSHL-------RRIGR--F 138
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
+ P + + YLH + +RD+K N+L+D +V DFG AK+ + G+
Sbjct: 139 SEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GR 194
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
T + GT YLAPE L + D ++ GV+I E+ G
Sbjct: 195 ---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 91/223 (40%), Gaps = 40/223 (17%)
Query: 313 DKFSQKNFIGRGGFGLV-----------YKGILQDGTTVAVKKVIESDFQGDAEFCNEVE 361
D+F + +G G FG V Y + D V K IE NE
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-------LNEKR 93
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
I+ + LV L DN S Y+V +Y+P G + HL + +
Sbjct: 94 ILQAVNFPFLVKLEFSF---KDN---SNLYMVMEYVPGGEMFSHL-------RRIGR--F 138
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
+ P + + YLH + +RD+K N+L+D +V DFG AK+ + G+
Sbjct: 139 SEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GR 194
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
T + GT YLAPE L + D ++ GV+I E+ G
Sbjct: 195 ---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 96/227 (42%), Gaps = 31/227 (13%)
Query: 309 ERATDKFSQKNFIGRGGFGLVYK-----GILQDGTTVAVKKVIESDFQG--DAEFCNEVE 361
E D + +G G F +V K LQ K+ +S +G + EV
Sbjct: 6 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 65
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
I+ ++H N++ L E ++ L+ + + G + D L K L
Sbjct: 66 ILKEIQHPNVITLHEVY------ENKTDVILILELVAGGELFDFL---------AEKESL 110
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNI-LLDADM---RARVADFGLAKQS 477
T + + + G+ YLH I H D+K NI LLD ++ R ++ DFGLA +
Sbjct: 111 TEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 167
Query: 478 REGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
G + GT ++APE Y L ++D++S GV+ ++ G
Sbjct: 168 DFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 91/223 (40%), Gaps = 40/223 (17%)
Query: 313 DKFSQKNFIGRGGFGLV-----------YKGILQDGTTVAVKKVIESDFQGDAEFCNEVE 361
D+F + +G G FG V Y + D V K IE NE
Sbjct: 62 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT-------LNEKR 114
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
I+ + LV L DN S Y+V +Y+P G + HL + +
Sbjct: 115 ILQAVNFPFLVKLEFSF---KDN---SNLYMVMEYVPGGEMFSHL-------RRIGR--F 159
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
+ P + + YLH + +RD+K N+L+D +V DFG AK+ + G+
Sbjct: 160 SEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GR 215
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
T + GT YLAPE L + D ++ GV+I E+ G
Sbjct: 216 ---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 91/223 (40%), Gaps = 40/223 (17%)
Query: 313 DKFSQKNFIGRGGFGLV-----------YKGILQDGTTVAVKKVIESDFQGDAEFCNEVE 361
D+F + +G G FG V Y + D V K IE NE
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHT-------LNEKR 93
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
I+ + LV L DN S Y+V +Y P G + HL + +
Sbjct: 94 ILQAVNFPFLVKLEFSF---KDN---SNLYMVMEYAPGGEMFSHL-------RRIGR--F 138
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
+ P + + YLH + +RD+K N+++D +V DFGLAK+ + G+
Sbjct: 139 SEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVK-GR 194
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
T + GT YLAPE L + D ++ GV+I E+ G
Sbjct: 195 ---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 96/227 (42%), Gaps = 31/227 (13%)
Query: 309 ERATDKFSQKNFIGRGGFGLVYK-----GILQDGTTVAVKKVIESDFQG--DAEFCNEVE 361
E D + +G G F +V K LQ K+ +S +G + EV
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
I+ ++H N++ L E ++ L+ + + G + D L K L
Sbjct: 67 ILKEIQHPNVITLHEVY------ENKTDVILILELVAGGELFDFL---------AEKESL 111
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNI-LLDADM---RARVADFGLAKQS 477
T + + + G+ YLH I H D+K NI LLD ++ R ++ DFGLA +
Sbjct: 112 TEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
Query: 478 REGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
G + GT ++APE Y L ++D++S GV+ ++ G
Sbjct: 169 DFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 90/223 (40%), Gaps = 40/223 (17%)
Query: 313 DKFSQKNFIGRGGFGLV-----------YKGILQDGTTVAVKKVIESDFQGDAEFCNEVE 361
D+F + +G G FG V Y + D V K IE NE
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT-------LNEKR 86
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
I+ + LV L DN S Y+V +Y+P G + HL + +
Sbjct: 87 ILQAVNFPFLVKLEFSF---KDN---SNLYMVMEYVPGGEMFSHL-------RRIGR--F 131
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
P + + YLH + +RD+K N+L+D +V DFG AK+ + G+
Sbjct: 132 XEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GR 187
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
T + GT YLAPE L + D ++ GV+I E+ G
Sbjct: 188 ---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 99/238 (41%), Gaps = 29/238 (12%)
Query: 296 PNTGSIWFK------IQDLERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIES- 348
P T +++F+ +D E ++ IG G FG V++GI A+ I++
Sbjct: 15 PTTENLYFQGAMGSSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTC 74
Query: 349 -DFQGDA---EFCNEVEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDD 404
+ D+ +F E + H ++V L G + +++ + G +
Sbjct: 75 KNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITEN-------PVWIIMELCTLGELRS 127
Query: 405 HLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADM 464
L V K L ++ LAYL HRDI A N+L+ ++
Sbjct: 128 FL--------QVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSND 176
Query: 465 RARVADFGLAKQSREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIM 522
++ DFGL++ + + ++ ++APE + + T SDV+ FGV + EI+
Sbjct: 177 CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 234
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 96/227 (42%), Gaps = 31/227 (13%)
Query: 309 ERATDKFSQKNFIGRGGFGLVYK-----GILQDGTTVAVKKVIESDFQG--DAEFCNEVE 361
E D + +G G F +V K LQ K+ +S +G + EV
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
I+ ++H N++ L E ++ L+ + + G + D L K L
Sbjct: 67 ILKEIQHPNVITLHEVY------ENKTDVILILELVAGGELFDFL---------AEKESL 111
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNI-LLDADM---RARVADFGLAKQS 477
T + + + G+ YLH I H D+K NI LLD ++ R ++ DFGLA +
Sbjct: 112 TEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
Query: 478 REGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
G + GT ++APE Y L ++D++S GV+ ++ G
Sbjct: 169 DFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 96/227 (42%), Gaps = 31/227 (13%)
Query: 309 ERATDKFSQKNFIGRGGFGLVYK-----GILQDGTTVAVKKVIESDFQG--DAEFCNEVE 361
E D + +G G F +V K LQ K+ +S +G + EV
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
I+ ++H N++ L E ++ L+ + + G + D L K L
Sbjct: 67 ILKEIQHPNVITLHEVY------ENKTDVILILELVAGGELFDFL---------AEKESL 111
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNI-LLDADM---RARVADFGLAKQS 477
T + + + G+ YLH I H D+K NI LLD ++ R ++ DFGLA +
Sbjct: 112 TEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
Query: 478 REGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
G + GT ++APE Y L ++D++S GV+ ++ G
Sbjct: 169 DFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 98/224 (43%), Gaps = 21/224 (9%)
Query: 311 ATDKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKV-IESDFQG-DAEFCNEVEIISNLK 367
AT ++ IG G +G VYK G VA+K V + + +G EV ++ L+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 368 ---HRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWP 424
H N+V L C +R + LV++++ D ++ D + P
Sbjct: 62 AFEHPNVVRLMDVCAT-SRTDREIKVTLVFEHV------DQDLRTYLDKAPPPGLPAE-- 112
Query: 425 QRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHL 484
K+++ +GL +LH I HRD+K NIL+ + ++ADFGLA+ +
Sbjct: 113 TIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA-- 167
Query: 485 TTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKAL 528
V T Y APE L D++S G + E M RK L
Sbjct: 168 LDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAE-MFRRKPL 210
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 112/282 (39%), Gaps = 38/282 (13%)
Query: 312 TDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNL-KHRN 370
+D + K IG G + + + + KVI+ + +E E+EI+ +H N
Sbjct: 26 SDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSE---EIEILLRYGQHPN 82
Query: 371 LVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKN-- 428
++ L+ + G YLV + M G + D + R + +R+
Sbjct: 83 IITLKDVY------DDGKHVYLVTELMRGGELLDKIL-----------RQKFFSEREASF 125
Query: 429 IILDVAKGLAYLHYGVKPAIYHRDIKATNIL-LDADMRA---RVADFGLAKQSREGQSHL 484
++ + K + YLH + HRD+K +NIL +D R+ DFG AKQ R L
Sbjct: 126 VLHTIGKTVEYLH---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLL 182
Query: 485 TTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLSTSGSPRACLITDW 544
T T ++APE E D++S G+++ ++ G S +P L
Sbjct: 183 MTPCY-TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIG 241
Query: 545 VWSLVKAGKVWQALDPS-------LLKEDDFLSLNPKAIMER 579
+G W + + +L D L K +++
Sbjct: 242 SGKFTLSGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQH 283
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 96/227 (42%), Gaps = 31/227 (13%)
Query: 309 ERATDKFSQKNFIGRGGFGLVYK-----GILQDGTTVAVKKVIESDFQG--DAEFCNEVE 361
E D + +G G F +V K LQ K+ +S +G + EV
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
I+ ++H N++ L E ++ L+ + + G + D L K L
Sbjct: 67 ILKEIQHPNVITLHEVY------ENKTDVILILELVAGGELFDFL---------AEKESL 111
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNI-LLDADM---RARVADFGLAKQS 477
T + + + G+ YLH I H D+K NI LLD ++ R ++ DFGLA +
Sbjct: 112 TEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
Query: 478 REGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
G + GT ++APE Y L ++D++S GV+ ++ G
Sbjct: 169 DFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 104/231 (45%), Gaps = 27/231 (11%)
Query: 309 ERATDKFSQKNFIGRGGFGLVYK----GILQD--GTTVAVKKVIESDFQGDAE-FCNEVE 361
E ++ S +G G FG V + G+++ TVAVK + S + E +E++
Sbjct: 42 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELK 101
Query: 362 IISNL-KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRP 420
++S L H N+V L G C + G ++ +Y G++ + L + P
Sbjct: 102 VLSYLGNHMNIVNLLGACTIGGPT------LVITEYCCYGDLLNFLRRKRDSFICSKTSP 155
Query: 421 LTWPQRK---------NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADF 471
+ + VAKG+A+L K I HRD+ A NILL ++ DF
Sbjct: 156 AIMEDDELALDLEDLLSFSYQVAKGMAFL--ASKNCI-HRDLAARNILLTHGRITKICDF 212
Query: 472 GLAKQSREGQSHLTTRVAGTH-GYLAPEYALYGQLTEKSDVYSFGVVILEI 521
GLA+ + +++ A ++APE T +SDV+S+G+ + E+
Sbjct: 213 GLARHIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL 263
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 104/231 (45%), Gaps = 27/231 (11%)
Query: 309 ERATDKFSQKNFIGRGGFGLVYK----GILQD--GTTVAVKKVIESDFQGDAE-FCNEVE 361
E ++ S +G G FG V + G+++ TVAVK + S + E +E++
Sbjct: 19 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELK 78
Query: 362 IISNL-KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRP 420
++S L H N+V L G C + G ++ +Y G++ + L + P
Sbjct: 79 VLSYLGNHMNIVNLLGACTIGGPT------LVITEYCCYGDLLNFLRRKRDSFICSKTSP 132
Query: 421 LTWPQRK---------NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADF 471
+ + VAKG+A+L K I HRD+ A NILL ++ DF
Sbjct: 133 AIMEDDELALDLEDLLSFSYQVAKGMAFL--ASKNCI-HRDLAARNILLTHGRITKICDF 189
Query: 472 GLAKQSREGQSHLTTRVAGTH-GYLAPEYALYGQLTEKSDVYSFGVVILEI 521
GLA+ + +++ A ++APE T +SDV+S+G+ + E+
Sbjct: 190 GLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL 240
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 90/223 (40%), Gaps = 40/223 (17%)
Query: 313 DKFSQKNFIGRGGFGLV-----------YKGILQDGTTVAVKKVIESDFQGDAEFCNEVE 361
D+F + +G G FG V Y + D V K IE NE
Sbjct: 42 DQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT-------LNEKR 94
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
I + LV L DN S Y+V +Y P G + HL + +
Sbjct: 95 IQQAVNFPFLVKLEFSF---KDN---SNLYMVLEYAPGGEMFSHL-------RRIGR--F 139
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
+ P + + YLH + +RD+K N+L+D +VADFG AK+ + G+
Sbjct: 140 SEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK-GR 195
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
T + GT YLAPE L + D ++ GV+I E+ G
Sbjct: 196 ---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 90/223 (40%), Gaps = 40/223 (17%)
Query: 313 DKFSQKNFIGRGGFGLV-----------YKGILQDGTTVAVKKVIESDFQGDAEFCNEVE 361
D+F + +G G FG V Y + D V K IE NE
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-------LNEKR 94
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
I+ + LV L DN S Y+V +Y+P G + HL + +
Sbjct: 95 ILQAVNFPFLVKLEFSF---KDN---SNLYMVMEYVPGGEMFSHL-------RRIGR--F 139
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
P + + YLH + +RD+K N+L+D +V DFG AK+ + G+
Sbjct: 140 XEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GR 195
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
T + GT YLAPE L + D ++ GV+I E+ G
Sbjct: 196 ---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 96/227 (42%), Gaps = 31/227 (13%)
Query: 309 ERATDKFSQKNFIGRGGFGLVYK-----GILQDGTTVAVKKVIESDFQG--DAEFCNEVE 361
E D + +G G F +V K LQ K+ +S +G + EV
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
I+ ++H N++ L E ++ L+ + + G + D L K L
Sbjct: 67 ILKEIQHPNVITLHEVY------ENKTDVILILELVAGGELFDFL---------AEKESL 111
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNI-LLDADM---RARVADFGLAKQS 477
T + + + G+ YLH I H D+K NI LLD ++ R ++ DFGLA +
Sbjct: 112 TEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
Query: 478 REGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
G + GT ++APE Y L ++D++S GV+ ++ G
Sbjct: 169 DFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 96/227 (42%), Gaps = 31/227 (13%)
Query: 309 ERATDKFSQKNFIGRGGFGLVYK-----GILQDGTTVAVKKVIESDFQG--DAEFCNEVE 361
E D + +G G F +V K LQ K+ +S +G + EV
Sbjct: 7 ENVDDYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
I+ ++H N++ L E ++ L+ + + G + D L K L
Sbjct: 67 ILKEIQHPNVITLHEVY------ENKTDVILILELVAGGELFDFL---------AEKESL 111
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNI-LLDADM---RARVADFGLAKQS 477
T + + + G+ YLH I H D+K NI LLD ++ R ++ DFGLA +
Sbjct: 112 TEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
Query: 478 REGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
G + GT ++APE Y L ++D++S GV+ ++ G
Sbjct: 169 DFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 90/223 (40%), Gaps = 40/223 (17%)
Query: 313 DKFSQKNFIGRGGFGLV-----------YKGILQDGTTVAVKKVIESDFQGDAEFCNEVE 361
D+F + +G G FG V Y + D V K IE NE
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-------LNEKR 93
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
I+ + LV L DN S Y+V +Y+P G + HL + +
Sbjct: 94 ILQAVNFPFLVKLEFSF---KDN---SNLYMVMEYVPGGEMFSHL-------RRIGR--F 138
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
P + + YLH + +RD+K N+L+D +V DFG AK+ + G+
Sbjct: 139 XEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GR 194
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
T + GT YLAPE L + D ++ GV+I E+ G
Sbjct: 195 ---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 95/232 (40%), Gaps = 33/232 (14%)
Query: 304 KIQDLERATDKFSQKNFIGRGGFG---LVYKGILQDGTTVAVKKVIESDFQGDAEFCNEV 360
KI+ L+ + + IGRG FG LV Q + + E + D+ F E
Sbjct: 66 KIRGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEE 125
Query: 361 EIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRP 420
I + V C D Y+V +YMP G++ +L +++ P
Sbjct: 126 RDIMAFANSPWVVQLFCAFQDD-----KYLYMVMEYMPGGDLV-NLMSNYD-------VP 172
Query: 421 LTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGL-AKQSRE 479
W K +V L +H + HRD+K N+LLD ++ADFG K
Sbjct: 173 EKWA--KFYTAEVVLALDAIH---SMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDET 227
Query: 480 GQSHLTTRVAGTHGYLAPEY-------ALYGQLTEKSDVYSFGVVILEIMCG 524
G H T V GT Y++PE YG+ + D +S GV + E++ G
Sbjct: 228 GMVHCDTAV-GTPDYISPEVLKSQGGDGYYGR---ECDWWSVGVFLFEMLVG 275
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 90/223 (40%), Gaps = 40/223 (17%)
Query: 313 DKFSQKNFIGRGGFGLV-----------YKGILQDGTTVAVKKVIESDFQGDAEFCNEVE 361
D+F + +G G FG V Y + D V K IE NE
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-------LNEKR 93
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
I+ + LV L DN S Y+V +Y+P G + HL + +
Sbjct: 94 ILQAVNFPFLVKLEFSF---KDN---SNLYMVMEYVPGGEMFSHL-------RRIGR--F 138
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
P + + YLH + +RD+K N+L+D +V DFG AK+ + G+
Sbjct: 139 XEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GR 194
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
T + GT YLAPE L + D ++ GV+I E+ G
Sbjct: 195 ---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 112/282 (39%), Gaps = 38/282 (13%)
Query: 312 TDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNL-KHRN 370
+D + K IG G + + + + KVI+ + +E E+EI+ +H N
Sbjct: 26 SDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSE---EIEILLRYGQHPN 82
Query: 371 LVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKN-- 428
++ L+ + G YLV + M G + D + R + +R+
Sbjct: 83 IITLKDVY------DDGKHVYLVTELMRGGELLDKIL-----------RQKFFSEREASF 125
Query: 429 IILDVAKGLAYLHYGVKPAIYHRDIKATNIL-LDADMRA---RVADFGLAKQSREGQSHL 484
++ + K + YLH + HRD+K +NIL +D R+ DFG AKQ R L
Sbjct: 126 VLHTIGKTVEYLH---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLL 182
Query: 485 TTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLSTSGSPRACLITDW 544
T T ++APE E D++S G+++ ++ G S +P L
Sbjct: 183 MTPCY-TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIG 241
Query: 545 VWSLVKAGKVWQALDPS-------LLKEDDFLSLNPKAIMER 579
+G W + + +L D L K +++
Sbjct: 242 SGKFTLSGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQH 283
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 89/204 (43%), Gaps = 11/204 (5%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAE---FCNEVEIISNLKHRNLVPLRGC 377
IG G +G K + + V K ++ +AE +EV ++ LKH N+V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 378 CVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGL 437
++D N + Y+V +Y G++ + + + + + R L +A
Sbjct: 74 -IIDRTN---TTLYIVMEYCEGGDLASVITKGTKERQYLDEE---FVLRVMTQLTLALKE 126
Query: 438 AYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGYLAP 497
+ + HRD+K N+ LD ++ DFGLA+ S T V GT Y++P
Sbjct: 127 CHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFV-GTPYYMSP 185
Query: 498 EYALYGQLTEKSDVYSFGVVILEI 521
E EKSD++S G ++ E+
Sbjct: 186 EQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 91/209 (43%), Gaps = 24/209 (11%)
Query: 321 IGRGGFGLVYKGI--LQDGTTVAVKKV-IESDFQGDAEFCNEVEIISNLKHRNLVPLRGC 377
+G G + VYKG L D VA+K++ +E + EV ++ +LKH N+V L
Sbjct: 10 LGEGTYATVYKGKSKLTDNL-VALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI 68
Query: 378 CVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGL 437
+ LV++Y+ D L +D + + K + + +GL
Sbjct: 69 IHTE------KSLTLVFEYL-----DKDLKQYLDDCGNI----INMHNVKLFLFQLLRGL 113
Query: 438 AYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGYLAP 497
AY H + + HRD+K N+L++ ++ADFGLA+ V T Y P
Sbjct: 114 AYCH---RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV-TLWYRPP 169
Query: 498 EYAL-YGQLTEKSDVYSFGVVILEIMCGR 525
+ L + + D++ G + E+ GR
Sbjct: 170 DILLGSTDYSTQIDMWGVGCIFYEMATGR 198
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 104/231 (45%), Gaps = 27/231 (11%)
Query: 309 ERATDKFSQKNFIGRGGFGLVYK----GILQD--GTTVAVKKVIESDFQGDAE-FCNEVE 361
E ++ S +G G FG V + G+++ TVAVK + S + E +E++
Sbjct: 35 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELK 94
Query: 362 IISNL-KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRP 420
++S L H N+V L G C + G ++ +Y G++ + L + P
Sbjct: 95 VLSYLGNHMNIVNLLGACTIGGPT------LVITEYCCYGDLLNFLRRKRDSFICSKTSP 148
Query: 421 LTWPQRK---------NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADF 471
+ + VAKG+A+L K I HRD+ A NILL ++ DF
Sbjct: 149 AIMEDDELALDLEDLLSFSYQVAKGMAFL--ASKNCI-HRDLAARNILLTHGRITKICDF 205
Query: 472 GLAKQSREGQSHLTTRVAGTH-GYLAPEYALYGQLTEKSDVYSFGVVILEI 521
GLA+ + +++ A ++APE T +SDV+S+G+ + E+
Sbjct: 206 GLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL 256
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 96/227 (42%), Gaps = 31/227 (13%)
Query: 309 ERATDKFSQKNFIGRGGFGLVYK-----GILQDGTTVAVKKVIESDFQG--DAEFCNEVE 361
E D + +G G F +V K LQ K+ +S +G + EV
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
I+ ++H N++ L E ++ L+ + + G + D L K L
Sbjct: 67 ILKEIQHPNVITLHEVY------ENKTDVILILELVAGGELFDFL---------AEKESL 111
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNI-LLDADM---RARVADFGLAKQS 477
T + + + G+ YLH I H D+K NI LLD ++ R ++ DFGLA +
Sbjct: 112 TEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
Query: 478 REGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
G + GT ++APE Y L ++D++S GV+ ++ G
Sbjct: 169 DFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 92/224 (41%), Gaps = 42/224 (18%)
Query: 313 DKFSQKNFIGRGGFGLVY------------KGILQDGTTVAVKKVIESDFQGDAEFCNEV 360
D+F + +G G FG V IL V +K++ + NE
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHT--------LNEK 92
Query: 361 EIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRP 420
I+ + LV L DN S Y+V +Y+P G + HL + +
Sbjct: 93 RILQAVNFPFLVKLEYSF---KDN---SNLYMVMEYVPGGEMFSHL-------RRIGR-- 137
Query: 421 LTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREG 480
+ P + + YLH + +RD+K N+L+D +V DFG AK+ + G
Sbjct: 138 FSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-G 193
Query: 481 QSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
+ T + GT YLAPE L + D ++ GV+I E+ G
Sbjct: 194 R---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 92/224 (41%), Gaps = 42/224 (18%)
Query: 313 DKFSQKNFIGRGGFGLVY------------KGILQDGTTVAVKKVIESDFQGDAEFCNEV 360
D+F + +G G FG V IL V +K++ + NE
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHT--------LNEK 92
Query: 361 EIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRP 420
I+ + LV L DN S Y+V +Y+P G + HL + +
Sbjct: 93 RILQAVNFPFLVKLEYSF---KDN---SNLYMVMEYVPGGEMFSHL-------RRIGR-- 137
Query: 421 LTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREG 480
+ P + + YLH + +RD+K N+L+D +V DFG AK+ + G
Sbjct: 138 FSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-G 193
Query: 481 QSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
+ T + GT YLAPE L + D ++ GV+I E+ G
Sbjct: 194 R---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 104/231 (45%), Gaps = 27/231 (11%)
Query: 309 ERATDKFSQKNFIGRGGFGLVYK----GILQD--GTTVAVKKVIESDFQGDAE-FCNEVE 361
E ++ S +G G FG V + G+++ TVAVK + S + E +E++
Sbjct: 37 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELK 96
Query: 362 IISNL-KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRP 420
++S L H N+V L G C + G ++ +Y G++ + L + P
Sbjct: 97 VLSYLGNHMNIVNLLGACTIGGPT------LVITEYCCYGDLLNFLRRKRDSFICSKTSP 150
Query: 421 LTWPQRK---------NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADF 471
+ + VAKG+A+L K I HRD+ A NILL ++ DF
Sbjct: 151 AIMEDDELALDLEDLLSFSYQVAKGMAFL--ASKNCI-HRDLAARNILLTHGRITKICDF 207
Query: 472 GLAKQSREGQSHLTTRVAGTH-GYLAPEYALYGQLTEKSDVYSFGVVILEI 521
GLA+ + +++ A ++APE T +SDV+S+G+ + E+
Sbjct: 208 GLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL 258
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 92/224 (41%), Gaps = 42/224 (18%)
Query: 313 DKFSQKNFIGRGGFGLVY------------KGILQDGTTVAVKKVIESDFQGDAEFCNEV 360
D+F + +G G FG V IL V +K++ + NE
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHT--------LNEK 92
Query: 361 EIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRP 420
I+ + LV L DN S Y+V +Y+P G + HL + +
Sbjct: 93 RILQAVNFPFLVKLEYSF---KDN---SNLYMVMEYVPGGEMFSHL-------RRIGR-- 137
Query: 421 LTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREG 480
+ P + + YLH + +RD+K N+L+D +V DFG AK+ + G
Sbjct: 138 FSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-G 193
Query: 481 QSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
+ T + GT YLAPE L + D ++ GV+I E+ G
Sbjct: 194 R---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 61/116 (52%), Gaps = 8/116 (6%)
Query: 416 VAKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAK 475
V K+ +T + + + + Y H + I HRD+K N+LLD ++ ++ADFGL+
Sbjct: 100 VEKKRMTEDEGRRFFQQIICAIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSN 156
Query: 476 QSREGQSHLTTRVAGTHGYLAPEYALYGQLTE--KSDVYSFGVVILEIMCGRKALD 529
+G T+ G+ Y APE + G+L + DV+S G+V+ ++ GR D
Sbjct: 157 IMTDGNFLKTS--CGSPNYAAPE-VINGKLYAGPEVDVWSCGIVLYVMLVGRLPFD 209
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 90/223 (40%), Gaps = 40/223 (17%)
Query: 313 DKFSQKNFIGRGGFGLV-----------YKGILQDGTTVAVKKVIESDFQGDAEFCNEVE 361
D+F + +G G FG V Y + D V K IE NE
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT-------LNEKR 94
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
I+ + LV L DN S Y+V +Y P G + HL + +
Sbjct: 95 ILQAVNFPFLVKLEFSF---KDN---SNLYMVMEYAPGGEMFSHL-------RRIGR--F 139
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
+ P + + YLH + +RD+K N+++D +V DFG AK+ + G+
Sbjct: 140 SEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-GR 195
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
T + GT YLAPE L + D ++ GV+I E+ G
Sbjct: 196 ---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 96/227 (42%), Gaps = 31/227 (13%)
Query: 309 ERATDKFSQKNFIGRGGFGLVYK-----GILQDGTTVAVKKVIESDFQG--DAEFCNEVE 361
E D + +G G F +V K LQ K+ +S +G + EV
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
I+ ++H N++ L E ++ L+ + + G + D L K L
Sbjct: 67 ILKEIQHPNVITLHEVY------ENKTDVILIGELVAGGELFDFL---------AEKESL 111
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNI-LLDADM---RARVADFGLAKQS 477
T + + + G+ YLH I H D+K NI LLD ++ R ++ DFGLA +
Sbjct: 112 TEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
Query: 478 REGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
G + GT ++APE Y L ++D++S GV+ ++ G
Sbjct: 169 DFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 104/231 (45%), Gaps = 27/231 (11%)
Query: 309 ERATDKFSQKNFIGRGGFGLVYK----GILQD--GTTVAVKKVIESDFQGDAE-FCNEVE 361
E ++ S +G G FG V + G+++ TVAVK + S + E +E++
Sbjct: 42 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELK 101
Query: 362 IISNL-KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRP 420
++S L H N+V L G C + G ++ +Y G++ + L + P
Sbjct: 102 VLSYLGNHMNIVNLLGACTIGGPT------LVITEYCCYGDLLNFLRRKRDSFICSKTSP 155
Query: 421 LTWPQRK---------NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADF 471
+ + VAKG+A+L K I HRD+ A NILL ++ DF
Sbjct: 156 AIMEDDELALDLEDLLSFSYQVAKGMAFL--ASKNCI-HRDLAARNILLTHGRITKICDF 212
Query: 472 GLAKQSREGQSHLTTRVAGTH-GYLAPEYALYGQLTEKSDVYSFGVVILEI 521
GLA+ + +++ A ++APE T +SDV+S+G+ + E+
Sbjct: 213 GLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL 263
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 90/223 (40%), Gaps = 40/223 (17%)
Query: 313 DKFSQKNFIGRGGFGLV-----------YKGILQDGTTVAVKKVIESDFQGDAEFCNEVE 361
D+F + +G G FG V Y + D V K IE NE
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-------LNEKR 93
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
I+ + LV L DN S Y+V +Y P G + HL + +
Sbjct: 94 ILQAVNFPFLVKLEFSF---KDN---SNLYMVMEYAPGGEMFSHL-------RRIGR--F 138
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
+ P + + YLH + +RD+K N+++D +V DFG AK+ + G+
Sbjct: 139 SEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-GR 194
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
T + GT YLAPE L + D ++ GV+I E+ G
Sbjct: 195 ---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 91/223 (40%), Gaps = 40/223 (17%)
Query: 313 DKFSQKNFIGRGGFGLV-----------YKGILQDGTTVAVKKVIESDFQGDAEFCNEVE 361
D+F + +G G FG V Y + D V K IE NE
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-------LNEKR 93
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
I+ + LV L DN S Y+V +Y+ G + HL + +
Sbjct: 94 ILQAVNFPFLVKLEFSF---KDN---SNLYMVMEYVAGGEMFSHL-------RRIGR--F 138
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
+ P + + YLH + +RD+K N+L+D +V DFG AK+ + G+
Sbjct: 139 SEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GR 194
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
T +AGT YLAPE L + D ++ GV+I E+ G
Sbjct: 195 ---TWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 90/223 (40%), Gaps = 40/223 (17%)
Query: 313 DKFSQKNFIGRGGFGLV-----------YKGILQDGTTVAVKKVIESDFQGDAEFCNEVE 361
D+F + +G G FG V Y + D V K IE NE
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-------LNEKR 93
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
I+ + LV L DN S Y+V +Y P G + HL + +
Sbjct: 94 ILQAVNFPFLVKLEFSF---KDN---SNLYMVMEYAPGGEMFSHL-------RRIGR--F 138
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
+ P + + YLH + +RD+K N+++D +V DFG AK+ + G+
Sbjct: 139 SEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVK-GR 194
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
T + GT YLAPE L + D ++ GV+I E+ G
Sbjct: 195 ---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 95/229 (41%), Gaps = 23/229 (10%)
Query: 299 GSIWFKIQDLERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIES--DFQGDA-- 354
G++ +D E ++ IG G FG V++GI A+ I++ + D+
Sbjct: 1 GAMGSSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR 60
Query: 355 -EFCNEVEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDG 413
+F E + H ++V L G + +++ + G + L
Sbjct: 61 EKFLQEALTMRQFDHPHIVKLIGVITEN-------PVWIIMELCTLGELRSFL------- 106
Query: 414 SGVAKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGL 473
V K L ++ LAYL HRDI A N+L+ ++ ++ DFGL
Sbjct: 107 -QVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGL 162
Query: 474 AKQSREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIM 522
++ + + ++ ++APE + + T SDV+ FGV + EI+
Sbjct: 163 SRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 211
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 89/223 (39%), Gaps = 40/223 (17%)
Query: 313 DKFSQKNFIGRGGFGLV-----------YKGILQDGTTVAVKKVIESDFQGDAEFCNEVE 361
D+F + +G G FG V Y + D V K IE NE
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-------LNEKR 93
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
I+ + LV L DN S Y+V +Y P G + HL + +
Sbjct: 94 ILQAVNFPFLVKLEFSF---KDN---SNLYMVMEYAPGGEMFSHL-------RRIGR--F 138
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
P + + YLH + +RD+K N+++D +V DFG AK+ + G+
Sbjct: 139 XEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-GR 194
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
T + GT YLAPE L + D ++ GV+I E+ G
Sbjct: 195 ---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 104/263 (39%), Gaps = 31/263 (11%)
Query: 305 IQDLERA----TDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEV 360
+Q L R TD + K IG G + + + I + K+I+ + E E+
Sbjct: 10 VQQLHRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTE---EI 66
Query: 361 EIISNL-KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKR 419
EI+ +H N++ L+ + G Y+V + M G + D + ++
Sbjct: 67 EILLRYGQHPNIITLKDVY------DDGKYVYVVTELMKGGELLDKIL---------RQK 111
Query: 420 PLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADM----RARVADFGLAK 475
+ + ++ + K + YLH + HRD+K +NIL + R+ DFG AK
Sbjct: 112 FFSEREASAVLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAK 168
Query: 476 QSREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLSTSGS 535
Q R L T T ++APE D++S GV++ ++ G +
Sbjct: 169 QLRAENGLLMTPCY-TANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDT 227
Query: 536 PRACLITDWVWSLVKAGKVWQAL 558
P L +G W ++
Sbjct: 228 PEEILARIGSGKFSLSGGYWNSV 250
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 92/229 (40%), Gaps = 37/229 (16%)
Query: 306 QDLERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIES--DFQGDA---EFCNEV 360
+D E ++ IG G FG V++GI A+ I++ + D+ +F E
Sbjct: 3 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEA 62
Query: 361 EIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRP 420
+ H ++V L G + +++ + G + L
Sbjct: 63 LTMRQFDHPHIVKLIGVITEN-------PVWIIMELCTLGELRSFL-------------- 101
Query: 421 LTWPQRKNIILDVAKGLAY-------LHYGVKPAIYHRDIKATNILLDADMRARVADFGL 473
Q + LD+A + Y L Y HRDI A N+L+ A ++ DFGL
Sbjct: 102 ----QVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGL 157
Query: 474 AKQSREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIM 522
++ + + ++ ++APE + + T SDV+ FGV + EI+
Sbjct: 158 SRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 94/227 (41%), Gaps = 45/227 (19%)
Query: 315 FSQKNFIGRGGFGLVYKGILQDGTT--------VAVKKVIESDFQGDAEFCNEVEIISNL 366
F +G+GG+G V++ G V K +I + + A E I+ +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQR 426
KH +V L + G + YL+ +Y+ G + L +R
Sbjct: 79 KHPFIVDLIYAF------QTGGKLYLILEYLSGGELFMQL------------------ER 114
Query: 427 KNIILD---------VAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQS 477
+ I ++ ++ L +LH + I +RD+K NI+L+ ++ DFGL K+S
Sbjct: 115 EGIFMEDTACFYLAEISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKES 171
Query: 478 REGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
+ +T GT Y+APE + D +S G ++ +++ G
Sbjct: 172 IHDGT-VTHXFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 92/222 (41%), Gaps = 23/222 (10%)
Query: 306 QDLERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIES--DFQGDA---EFCNEV 360
+D E ++ IG G FG V++GI A+ I++ + D+ +F E
Sbjct: 3 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEA 62
Query: 361 EIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRP 420
+ H ++V L G + +++ + G + L V K
Sbjct: 63 LTMRQFDHPHIVKLIGVITEN-------PVWIIMELCTLGELRSFL--------QVRKYS 107
Query: 421 LTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREG 480
L ++ LAYL HRDI A N+L+ ++ ++ DFGL++ +
Sbjct: 108 LDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 164
Query: 481 QSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIM 522
+ ++ ++APE + + T SDV+ FGV + EI+
Sbjct: 165 TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 92/222 (41%), Gaps = 23/222 (10%)
Query: 306 QDLERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIES--DFQGDA---EFCNEV 360
+D E ++ IG G FG V++GI A+ I++ + D+ +F E
Sbjct: 3 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEA 62
Query: 361 EIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRP 420
+ H ++V L G + +++ + G + L V K
Sbjct: 63 LTMRQFDHPHIVKLIGVITEN-------PVWIIMELCTLGELRSFL--------QVRKYS 107
Query: 421 LTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREG 480
L ++ LAYL HRDI A N+L+ ++ ++ DFGL++ +
Sbjct: 108 LDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 164
Query: 481 QSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIM 522
+ ++ ++APE + + T SDV+ FGV + EI+
Sbjct: 165 TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 97/233 (41%), Gaps = 30/233 (12%)
Query: 304 KIQDLERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIES-DFQGDAE---FCNE 359
K++ + + F IGRG FG V L++ V K++ + AE F E
Sbjct: 65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREE 124
Query: 360 VEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDG--SGVA 417
+++ N + + L D + YLV DY G++ L F D +A
Sbjct: 125 RDVLVNGDSKWITTLHYAFQDDNN------LYLVMDYYVGGDLLT-LLSKFEDRLPEEMA 177
Query: 418 KRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQS 477
+ L I +D L Y+H RDIK NIL+D + R+ADFG +
Sbjct: 178 RFYLA---EMVIAIDSVHQLHYVH---------RDIKPDNILMDMNGHIRLADFGSCLKL 225
Query: 478 REGQSHLTTRVAGTHGYLAPEYAL-----YGQLTEKSDVYSFGVVILEIMCGR 525
E + ++ GT Y++PE G+ + D +S GV + E++ G
Sbjct: 226 MEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGE 278
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 89/223 (39%), Gaps = 40/223 (17%)
Query: 313 DKFSQKNFIGRGGFGLV-----------YKGILQDGTTVAVKKVIESDFQGDAEFCNEVE 361
D+F + +G G FG V Y + D V K IE NE
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-------LNEKR 94
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
I+ + L L DN S Y+V +Y P G + HL + +
Sbjct: 95 ILQAVNFPFLTKLEFSF---KDN---SNLYMVMEYAPGGEMFSHL-------RRIGR--F 139
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
+ P + + YLH + +RD+K N+++D +V DFG AK+ + G+
Sbjct: 140 SEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-GR 195
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
T + GT YLAPE L + D ++ GV+I E+ G
Sbjct: 196 ---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 94/227 (41%), Gaps = 45/227 (19%)
Query: 315 FSQKNFIGRGGFGLVYKGILQDGTT--------VAVKKVIESDFQGDAEFCNEVEIISNL 366
F +G+GG+G V++ G V K +I + + A E I+ +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQR 426
KH +V L + G + YL+ +Y+ G + L +R
Sbjct: 79 KHPFIVDLIYAF------QTGGKLYLILEYLSGGELFMQL------------------ER 114
Query: 427 KNIILD---------VAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQS 477
+ I ++ ++ L +LH + I +RD+K NI+L+ ++ DFGL K+S
Sbjct: 115 EGIFMEDTACFYLAEISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKES 171
Query: 478 REGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
+ +T GT Y+APE + D +S G ++ +++ G
Sbjct: 172 IHDGT-VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 78/174 (44%), Gaps = 24/174 (13%)
Query: 355 EFCNEVEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGS 414
E EV I+ + H N++ L E ++ L+ + + G + D L
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVY------ENRTDVVLILELVSGGELFDFL-------- 106
Query: 415 GVAKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNI-LLDADM---RARVAD 470
K L+ + + I + G+ YLH I H D+K NI LLD ++ ++ D
Sbjct: 107 -AQKESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLID 162
Query: 471 FGLAKQSREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
FGLA + +G + GT ++APE Y L ++D++S GV+ ++ G
Sbjct: 163 FGLAHEIEDGVEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 78/174 (44%), Gaps = 24/174 (13%)
Query: 355 EFCNEVEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGS 414
E EV I+ + H N++ L E ++ L+ + + G + D L
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVY------ENRTDVVLILELVSGGELFDFL-------- 106
Query: 415 GVAKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNI-LLDADM---RARVAD 470
K L+ + + I + G+ YLH I H D+K NI LLD ++ ++ D
Sbjct: 107 -AQKESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLID 162
Query: 471 FGLAKQSREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
FGLA + +G + GT ++APE Y L ++D++S GV+ ++ G
Sbjct: 163 FGLAHEIEDGVEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 89/223 (39%), Gaps = 40/223 (17%)
Query: 313 DKFSQKNFIGRGGFGLV-----------YKGILQDGTTVAVKKVIESDFQGDAEFCNEVE 361
D+F + +G G FG V Y + D V K IE NE
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-------LNEKR 94
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
I+ + L L DN S Y+V +Y P G + HL + +
Sbjct: 95 ILQAVNFPFLTKLEFSF---KDN---SNLYMVMEYAPGGEMFSHL-------RRIGR--F 139
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
+ P + + YLH + +RD+K N+++D +V DFG AK+ + G+
Sbjct: 140 SEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-GR 195
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
T + GT YLAPE L + D ++ GV+I E+ G
Sbjct: 196 ---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 78/174 (44%), Gaps = 24/174 (13%)
Query: 355 EFCNEVEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGS 414
E EV I+ + H N++ L E ++ L+ + + G + D L
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVY------ENRTDVVLILELVSGGELFDFL-------- 106
Query: 415 GVAKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNI-LLDADM---RARVAD 470
K L+ + + I + G+ YLH I H D+K NI LLD ++ ++ D
Sbjct: 107 -AQKESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLID 162
Query: 471 FGLAKQSREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
FGLA + +G + GT ++APE Y L ++D++S GV+ ++ G
Sbjct: 163 FGLAHEIEDGVEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 100/219 (45%), Gaps = 23/219 (10%)
Query: 314 KFSQKNFIGRGGFGLVYKGILQDG-TTVAVKKV-IESDFQG-DAEFCNEVEIISNLKHRN 370
K+ + IG G +G V+K ++ VA+K+V ++ D +G + E+ ++ LKH+N
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62
Query: 371 LVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNII 430
+V L D + LV+++ D L F+ +G + K+ +
Sbjct: 63 IVRLHDVLHSD------KKLTLVFEF-----CDQDLKKYFDSCNGDLDPEIV----KSFL 107
Query: 431 LDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAG 490
+ KGL + H + HRD+K N+L++ + ++ADFGLA+ + V
Sbjct: 108 FQLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV- 163
Query: 491 THGYLAPEYALYGQLTEKS-DVYSFGVVILEIMCGRKAL 528
T Y P+ +L S D++S G + E+ + L
Sbjct: 164 TLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPL 202
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 87/204 (42%), Gaps = 11/204 (5%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAE---FCNEVEIISNLKHRNLVPLRGC 377
IG G +G K + + V K ++ +AE +EV ++ LKH N+V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 378 CVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGL 437
++D N + Y+V +Y G++ + + + + + R L +A
Sbjct: 74 -IIDRTN---TTLYIVMEYCEGGDLASVITKGTKERQYLDEE---FVLRVMTQLTLALKE 126
Query: 438 AYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGYLAP 497
+ + HRD+K N+ LD ++ DFGLA+ + GT Y++P
Sbjct: 127 CHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDED-FAKEFVGTPYYMSP 185
Query: 498 EYALYGQLTEKSDVYSFGVVILEI 521
E EKSD++S G ++ E+
Sbjct: 186 EQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 87/204 (42%), Gaps = 11/204 (5%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAE---FCNEVEIISNLKHRNLVPLRGC 377
IG G +G K + + V K ++ +AE +EV ++ LKH N+V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 378 CVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGL 437
++D N + Y+V +Y G++ + + + + + R L +A
Sbjct: 74 -IIDRTN---TTLYIVMEYCEGGDLASVITKGTKERQYLDEE---FVLRVMTQLTLALKE 126
Query: 438 AYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGYLAP 497
+ + HRD+K N+ LD ++ DFGLA+ S GT Y++P
Sbjct: 127 CHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTS-FAKAFVGTPYYMSP 185
Query: 498 EYALYGQLTEKSDVYSFGVVILEI 521
E EKSD++S G ++ E+
Sbjct: 186 EQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 92/229 (40%), Gaps = 37/229 (16%)
Query: 306 QDLERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIES--DFQGDA---EFCNEV 360
+D E ++ IG G FG V++GI A+ I++ + D+ +F E
Sbjct: 3 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEA 62
Query: 361 EIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRP 420
+ H ++V L G + +++ + G + L
Sbjct: 63 LTMRQFDHPHIVKLIGVITEN-------PVWIIMELCTLGELRSFL-------------- 101
Query: 421 LTWPQRKNIILDVAKGLAY-------LHYGVKPAIYHRDIKATNILLDADMRARVADFGL 473
Q + LD+A + Y L Y HRDI A N+L+ ++ ++ DFGL
Sbjct: 102 ----QVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGL 157
Query: 474 AKQSREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIM 522
++ + ++ ++APE + + T SDV+ FGV + EI+
Sbjct: 158 SRYMEDSTXXKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 78/174 (44%), Gaps = 24/174 (13%)
Query: 355 EFCNEVEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGS 414
E EV I+ + H N++ L E ++ L+ + + G + D L
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVY------ENRTDVVLILELVSGGELFDFL-------- 106
Query: 415 GVAKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNI-LLDADM---RARVAD 470
K L+ + + I + G+ YLH I H D+K NI LLD ++ ++ D
Sbjct: 107 -AQKESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLID 162
Query: 471 FGLAKQSREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
FGLA + +G + GT ++APE Y L ++D++S GV+ ++ G
Sbjct: 163 FGLAHEIEDGVEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 92/222 (41%), Gaps = 23/222 (10%)
Query: 306 QDLERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIES--DFQGDA---EFCNEV 360
+D E ++ IG G FG V++GI A+ I++ + D+ +F E
Sbjct: 5 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEA 64
Query: 361 EIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRP 420
+ H ++V L G + +++ + G + L V K
Sbjct: 65 LTMRQFDHPHIVKLIGVITEN-------PVWIIMELCTLGELRSFL--------QVRKYS 109
Query: 421 LTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREG 480
L ++ LAYL HRDI A N+L+ ++ ++ DFGL++ +
Sbjct: 110 LDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 166
Query: 481 QSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIM 522
+ ++ ++APE + + T SDV+ FGV + EI+
Sbjct: 167 TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 208
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 78/174 (44%), Gaps = 24/174 (13%)
Query: 355 EFCNEVEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGS 414
E EV I+ + H N++ L E ++ L+ + + G + D L
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVY------ENRTDVVLILELVSGGELFDFL-------- 106
Query: 415 GVAKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNI-LLDADM---RARVAD 470
K L+ + + I + G+ YLH I H D+K NI LLD ++ ++ D
Sbjct: 107 -AQKESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLID 162
Query: 471 FGLAKQSREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
FGLA + +G + GT ++APE Y L ++D++S GV+ ++ G
Sbjct: 163 FGLAHEIEDGVEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 92/222 (41%), Gaps = 23/222 (10%)
Query: 306 QDLERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIES--DFQGDA---EFCNEV 360
+D E ++ IG G FG V++GI A+ I++ + D+ +F E
Sbjct: 6 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEA 65
Query: 361 EIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRP 420
+ H ++V L G + +++ + G + L V K
Sbjct: 66 LTMRQFDHPHIVKLIGVITEN-------PVWIIMELCTLGELRSFL--------QVRKYS 110
Query: 421 LTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREG 480
L ++ LAYL HRDI A N+L+ ++ ++ DFGL++ +
Sbjct: 111 LDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 167
Query: 481 QSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIM 522
+ ++ ++APE + + T SDV+ FGV + EI+
Sbjct: 168 TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 209
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 109/242 (45%), Gaps = 57/242 (23%)
Query: 318 KNFIGRGGFG-LVYKGILQDGTTVAVKKVIESDFQGDAEFCN----EVEIISNLK-HRNL 371
+ +G G G +V++G Q G VAVK+++ +FC+ E+++++ H N+
Sbjct: 20 EKILGYGSSGTVVFQGSFQ-GRPVAVKRML-------IDFCDIALMEIKLLTESDDHPNV 71
Query: 372 VPLRGCCVVDGDNERGSERYL-VYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKN-- 428
+ R C ++R+L + + N N+ D + + V+ L + N
Sbjct: 72 I--RYYC------SETTDRFLYIALELCNLNLQDLV-----ESKNVSDENLKLQKEYNPI 118
Query: 429 -IILDVAKGLAYLHYGVKPAIYHRDIKATNILLDA-------------DMRARVADFGLA 474
++ +A G+A+LH I HRD+K NIL+ ++R ++DFGL
Sbjct: 119 SLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLC 175
Query: 475 KQSREGQSHLTTRV---AGTHGYLAPE-------YALYGQLTEKSDVYSFGVVILEIMCG 524
K+ GQS T + +GT G+ APE +LT D++S G V I+
Sbjct: 176 KKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSK 235
Query: 525 RK 526
K
Sbjct: 236 GK 237
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 100/234 (42%), Gaps = 37/234 (15%)
Query: 304 KIQDLERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQ-----GDAEFCN 358
KI+DL + + IGRG FG V + V K++ S F+ A F
Sbjct: 65 KIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLL-SKFEMIKRSDSAFFWE 123
Query: 359 EVEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAK 418
E +I++ +V L D Y+V +YMP G++ +L +++
Sbjct: 124 ERDIMAFANSPWVVQLFYAFQDD------RYLYMVMEYMPGGDL-VNLMSNYD------- 169
Query: 419 RPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGL-AKQS 477
P W + +V L +H HRD+K N+LLD ++ADFG K +
Sbjct: 170 VPEKWA--RFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMN 224
Query: 478 REGQSHLTTRVAGTHGYLAPEY-------ALYGQLTEKSDVYSFGVVILEIMCG 524
+EG T V GT Y++PE YG+ + D +S GV + E++ G
Sbjct: 225 KEGMVRCDTAV-GTPDYISPEVLKSQGGDGYYGR---ECDWWSVGVFLYEMLVG 274
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 100/234 (42%), Gaps = 37/234 (15%)
Query: 304 KIQDLERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQ-----GDAEFCN 358
KI+DL + + IGRG FG V + V K++ S F+ A F
Sbjct: 60 KIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLL-SKFEMIKRSDSAFFWE 118
Query: 359 EVEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAK 418
E +I++ +V L D Y+V +YMP G++ +L +++
Sbjct: 119 ERDIMAFANSPWVVQLFYAFQDD------RYLYMVMEYMPGGDL-VNLMSNYD------- 164
Query: 419 RPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGL-AKQS 477
P W + +V L +H HRD+K N+LLD ++ADFG K +
Sbjct: 165 VPEKWA--RFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMN 219
Query: 478 REGQSHLTTRVAGTHGYLAPEY-------ALYGQLTEKSDVYSFGVVILEIMCG 524
+EG T V GT Y++PE YG+ + D +S GV + E++ G
Sbjct: 220 KEGMVRCDTAV-GTPDYISPEVLKSQGGDGYYGR---ECDWWSVGVFLYEMLVG 269
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 88/223 (39%), Gaps = 40/223 (17%)
Query: 313 DKFSQKNFIGRGGFGLV-----------YKGILQDGTTVAVKKVIESDFQGDAEFCNEVE 361
D+F + +G G FG V Y + D V K IE NE
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-------LNEKR 94
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
I+ + L L DN S Y+V +Y P G + HL + +
Sbjct: 95 ILQAVNFPFLTKLEFSF---KDN---SNLYMVMEYAPGGEMFSHL-------RRIGR--F 139
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
P + + YLH + +RD+K N+++D +V DFG AK+ + G+
Sbjct: 140 XEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-GR 195
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
T + GT YLAPE L + D ++ GV+I E+ G
Sbjct: 196 ---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 90/223 (40%), Gaps = 40/223 (17%)
Query: 313 DKFSQKNFIGRGGFGLV-----------YKGILQDGTTVAVKKVIESDFQGDAEFCNEVE 361
D+F + +G G FG V Y + D V K IE NE
Sbjct: 28 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-------LNEKR 80
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
I+ + LV L DN S Y+V +Y+ G + HL + +
Sbjct: 81 ILQAVNFPFLVKLEFSF---KDN---SNLYMVMEYVAGGEMFSHL-------RRIGR--F 125
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
+ P + + YLH + +RD+K N+L+D +V DFG AK+ + G+
Sbjct: 126 SEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVK-GR 181
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
T + GT YLAPE L + D ++ GV+I E+ G
Sbjct: 182 ---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 88/223 (39%), Gaps = 40/223 (17%)
Query: 313 DKFSQKNFIGRGGFGLV-----------YKGILQDGTTVAVKKVIESDFQGDAEFCNEVE 361
D+F + +G G FG V Y + D V K IE NE
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-------LNEKR 114
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
I+ + LV L DN S Y+V +Y+ G + HL + +
Sbjct: 115 ILQAVNFPFLVKLEFSF---KDN---SNLYMVMEYVAGGEMFSHL-------RRIGR--F 159
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
+ P + + YLH + +RD+K N+L+D +V DFG AK+ +
Sbjct: 160 SEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGA- 215
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
T + GT YLAPE L + D ++ GV+I E+ G
Sbjct: 216 ---TWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 91/221 (41%), Gaps = 23/221 (10%)
Query: 307 DLERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIES--DFQGDA---EFCNEVE 361
D E ++ IG G FG V++GI A+ I++ + D+ +F E
Sbjct: 1 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 60
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
+ H ++V L G + +++ + G + L V K L
Sbjct: 61 TMRQFDHPHIVKLIGVITEN-------PVWIIMELCTLGELRSFL--------QVRKYSL 105
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
++ LAYL HRDI A N+L+ ++ ++ DFGL++ +
Sbjct: 106 DLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 162
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIM 522
+ ++ ++APE + + T SDV+ FGV + EI+
Sbjct: 163 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 203
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 90/223 (40%), Gaps = 40/223 (17%)
Query: 313 DKFSQKNFIGRGGFGLV-----------YKGILQDGTTVAVKKVIESDFQGDAEFCNEVE 361
D+F + +G G FG V Y + D V K IE NE
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-------LNEKR 93
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
I+ + LV L DN S Y+V +Y+ G + HL + +
Sbjct: 94 ILQAVNFPFLVKLEFSF---KDN---SNLYMVMEYVAGGEMFSHL-------RRIGR--F 138
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
+ P + + YLH + +RD+K N+L+D +V DFG AK+ + G+
Sbjct: 139 SEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GR 194
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
T + GT YLAPE L + D ++ GV+I E+ G
Sbjct: 195 ---TWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 100/234 (42%), Gaps = 37/234 (15%)
Query: 304 KIQDLERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQ-----GDAEFCN 358
KI+DL + + IGRG FG V + V K++ S F+ A F
Sbjct: 65 KIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLL-SKFEMIKRSDSAFFWE 123
Query: 359 EVEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAK 418
E +I++ +V L D Y+V +YMP G++ +L +++
Sbjct: 124 ERDIMAFANSPWVVQLFYAFQDD------RYLYMVMEYMPGGDL-VNLMSNYD------- 169
Query: 419 RPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGL-AKQS 477
P W + +V L +H HRD+K N+LLD ++ADFG K +
Sbjct: 170 VPEKWA--RFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMN 224
Query: 478 REGQSHLTTRVAGTHGYLAPEY-------ALYGQLTEKSDVYSFGVVILEIMCG 524
+EG T V GT Y++PE YG+ + D +S GV + E++ G
Sbjct: 225 KEGMVRCDTAV-GTPDYISPEVLKSQGGDGYYGR---ECDWWSVGVFLYEMLVG 274
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 90/223 (40%), Gaps = 40/223 (17%)
Query: 313 DKFSQKNFIGRGGFGLV-----------YKGILQDGTTVAVKKVIESDFQGDAEFCNEVE 361
D+F + +G G FG V Y + D V K IE NE
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-------LNEKR 93
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
I+ + LV L DN S Y+V +Y+ G + HL + +
Sbjct: 94 ILQAVNFPFLVKLEFSF---KDN---SNLYMVMEYVAGGEMFSHL-------RRIGR--F 138
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
+ P + + YLH + +RD+K N+L+D +V DFG AK+ + G+
Sbjct: 139 SEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GR 194
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
T + GT YLAPE L + D ++ GV+I E+ G
Sbjct: 195 ---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 90/194 (46%), Gaps = 33/194 (17%)
Query: 315 FSQKNFIGRGGFG-LVYKGILQDGTTVAVKKVIESDFQGDAEFCN-EVEII-SNLKHRNL 371
F K+ +G G G +VY+G+ D VAVK+++ F F + EV+++ + +H N+
Sbjct: 26 FCPKDVLGHGAEGTIVYRGMF-DNRDVAVKRILPECFS----FADREVQLLRESDEHPNV 80
Query: 372 VPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIIL 431
+ R C +R Y + + D + + P+T Q+
Sbjct: 81 I--RYFCT-------EKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQ----- 126
Query: 432 DVAKGLAYLHYGVKPAIYHRDIKATNILLD-----ADMRARVADFGLAKQSREGQSHLTT 486
GLA+LH I HRD+K NIL+ ++A ++DFGL K+ G+ +
Sbjct: 127 -TTSGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSR 182
Query: 487 R--VAGTHGYLAPE 498
R V GT G++APE
Sbjct: 183 RSGVPGTEGWIAPE 196
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 90/223 (40%), Gaps = 40/223 (17%)
Query: 313 DKFSQKNFIGRGGFGLV-----------YKGILQDGTTVAVKKVIESDFQGDAEFCNEVE 361
D+F + +G G FG V Y + D V K IE NE
Sbjct: 42 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-------LNEKR 94
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
I+ + LV L DN S Y+V +Y+ G + HL + +
Sbjct: 95 ILQAVNFPFLVKLEFSF---KDN---SNLYMVMEYVAGGEMFSHL-------RRIGR--F 139
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
+ P + + YLH + +RD+K N+L+D +V DFG AK+ + G+
Sbjct: 140 SEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GR 195
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
T + GT YLAPE L + D ++ GV+I E+ G
Sbjct: 196 ---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 90/223 (40%), Gaps = 40/223 (17%)
Query: 313 DKFSQKNFIGRGGFGLV-----------YKGILQDGTTVAVKKVIESDFQGDAEFCNEVE 361
D+F + +G G FG V Y + D V K IE NE
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-------LNEKR 93
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
I+ + LV L DN S Y+V +Y+ G + HL + +
Sbjct: 94 ILQAVNFPFLVKLEFSF---KDN---SNLYMVMEYVAGGEMFSHL-------RRIGR--F 138
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
+ P + + YLH + +RD+K N+L+D +V DFG AK+ + G+
Sbjct: 139 SEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GR 194
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
T + GT YLAPE L + D ++ GV+I E+ G
Sbjct: 195 ---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 101/244 (41%), Gaps = 31/244 (12%)
Query: 303 FKIQDLERATDKFSQKNFIGRGGFGLVYKGILQD---GTTVAVKKVIESDFQGDAEFCNE 359
F Q +E + + + GGF VY+ QD G A+K+++ ++ + + E
Sbjct: 18 FVGQTVELGELRLRVRRVLAEGGFAFVYEA--QDVGSGREYALKRLLSNEEEKNRAIIQE 75
Query: 360 VEIISNLK-HRNLVPL-RGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVA 417
V + L H N+V + +++ G +L+ + G + + L + G
Sbjct: 76 VCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRG---- 131
Query: 418 KRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAK-- 475
PL+ I + + ++H KP I HRD+K N+LL ++ DFG A
Sbjct: 132 --PLSCDTVLKIFYQTCRAVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTI 188
Query: 476 ----------QSREGQSHLTTRVAGTHGYLAPEYA-LYGQ--LTEKSDVYSFGVVILEIM 522
Q R TR T Y PE LY + EK D+++ G IL ++
Sbjct: 189 SHYPDYSWSAQRRALVEEEITRNT-TPMYRTPEIIDLYSNFPIGEKQDIWALG-CILYLL 246
Query: 523 CGRK 526
C R+
Sbjct: 247 CFRQ 250
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 90/223 (40%), Gaps = 40/223 (17%)
Query: 313 DKFSQKNFIGRGGFGLV-----------YKGILQDGTTVAVKKVIESDFQGDAEFCNEVE 361
D+F + +G G FG V Y + D V K IE NE
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-------LNEKR 93
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
I+ + LV L DN S Y+V +Y+ G + HL + +
Sbjct: 94 ILQAVNFPFLVKLEFSF---KDN---SNLYMVMEYVAGGEMFSHL-------RRIGR--F 138
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
+ P + + YLH + +RD+K N+L+D +V DFG AK+ + G+
Sbjct: 139 SEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GR 194
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
T + GT YLAPE L + D ++ GV+I E+ G
Sbjct: 195 ---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 90/223 (40%), Gaps = 40/223 (17%)
Query: 313 DKFSQKNFIGRGGFGLV-----------YKGILQDGTTVAVKKVIESDFQGDAEFCNEVE 361
D+F + +G G FG V Y + D V K IE NE
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-------LNEKR 93
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
I+ + LV L DN S Y+V +Y+ G + HL + +
Sbjct: 94 ILQAVNFPFLVKLEFSF---KDN---SNLYMVMEYVAGGEMFSHL-------RRIGR--F 138
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
+ P + + YLH + +RD+K N+L+D +V DFG AK+ + G+
Sbjct: 139 SEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GR 194
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
T + GT YLAPE L + D ++ GV+I E+ G
Sbjct: 195 ---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 90/223 (40%), Gaps = 40/223 (17%)
Query: 313 DKFSQKNFIGRGGFGLV-----------YKGILQDGTTVAVKKVIESDFQGDAEFCNEVE 361
D+F + +G G FG V Y + D V K IE NE
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-------LNEKR 93
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
I+ + LV L DN S Y+V +Y+ G + HL + +
Sbjct: 94 ILQAVNFPFLVKLEFSF---KDN---SNLYMVMEYVAGGEMFSHL-------RRIGR--F 138
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
+ P + + YLH + +RD+K N+L+D +V DFG AK+ + G+
Sbjct: 139 SEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GR 194
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
T + GT YLAPE L + D ++ GV+I E+ G
Sbjct: 195 ---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 90/223 (40%), Gaps = 40/223 (17%)
Query: 313 DKFSQKNFIGRGGFGLV-----------YKGILQDGTTVAVKKVIESDFQGDAEFCNEVE 361
D+F + +G G FG V Y + D V K IE NE
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-------LNEKR 93
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
I+ + LV L DN S Y+V +Y+ G + HL + +
Sbjct: 94 ILQAVNFPFLVKLEFSF---KDN---SNLYMVMEYVAGGEMFSHL-------RRIGR--F 138
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
+ P + + YLH + +RD+K N+L+D +V DFG AK+ + G+
Sbjct: 139 SEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GR 194
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
T + GT YLAPE L + D ++ GV+I E+ G
Sbjct: 195 ---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 64/136 (47%), Gaps = 14/136 (10%)
Query: 391 YLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYH 450
+L+ DY+ G + HL + T + + + ++ L +LH K I +
Sbjct: 135 HLILDYINGGELFTHL---------SQRERFTEHEVQIYVGEIVLALEHLH---KLGIIY 182
Query: 451 RDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGYLAPEYALYGQLTEKS- 509
RDIK NILLD++ + DFGL+K+ ++ GT Y+AP+ G
Sbjct: 183 RDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKA 242
Query: 510 -DVYSFGVVILEIMCG 524
D +S GV++ E++ G
Sbjct: 243 VDWWSLGVLMYELLTG 258
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 78/174 (44%), Gaps = 24/174 (13%)
Query: 355 EFCNEVEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGS 414
E EV I+ + H N++ L E ++ L+ + + G + D L
Sbjct: 61 EIEREVSILRQVLHPNIITLHDVY------ENRTDVVLILELVSGGELFDFL-------- 106
Query: 415 GVAKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNI-LLDADM---RARVAD 470
K L+ + + I + G+ YLH I H D+K NI LLD ++ ++ D
Sbjct: 107 -AQKESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLID 162
Query: 471 FGLAKQSREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
FGLA + +G + GT ++APE Y L ++D++S GV+ ++ G
Sbjct: 163 FGLAHEIEDGVEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 89/223 (39%), Gaps = 40/223 (17%)
Query: 313 DKFSQKNFIGRGGFGLV-----------YKGILQDGTTVAVKKVIESDFQGDAEFCNEVE 361
D+F + +G G FG V Y + D V K IE NE
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-------LNEKR 93
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
I+ + LV L DN S Y+V +Y+ G + HL + +
Sbjct: 94 ILQAVNFPFLVKLEFSF---KDN---SNLYMVMEYVAGGEMFSHL-------RRIGR--F 138
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
P + + YLH + +RD+K N+L+D +V DFG AK+ + G+
Sbjct: 139 XEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GR 194
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
T + GT YLAPE L + D ++ GV+I E+ G
Sbjct: 195 ---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 89/223 (39%), Gaps = 40/223 (17%)
Query: 313 DKFSQKNFIGRGGFGLV-----------YKGILQDGTTVAVKKVIESDFQGDAEFCNEVE 361
D+F + +G G FG V Y + D V K IE NE
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-------LNEKR 93
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
I+ + LV L DN S Y+V +Y+ G + HL + +
Sbjct: 94 ILQAVNFPFLVKLEFSF---KDN---SNLYMVMEYVAGGEMFSHL-------RRIGR--F 138
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
P + + YLH + +RD+K N+L+D +V DFG AK+ + G+
Sbjct: 139 AEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GR 194
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
T + GT YLAPE L + D ++ GV+I E+ G
Sbjct: 195 ---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 89/223 (39%), Gaps = 40/223 (17%)
Query: 313 DKFSQKNFIGRGGFGLV-----------YKGILQDGTTVAVKKVIESDFQGDAEFCNEVE 361
D+F + +G G FG V Y + D V K IE NE
Sbjct: 36 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-------LNEKR 88
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
I+ + LV L DN S Y+V +Y+ G + HL + +
Sbjct: 89 ILQAVNFPFLVKLEFSF---KDN---SNLYMVMEYVAGGEMFSHL-------RRIGR--F 133
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
P + + YLH + +RD+K N+L+D +V DFG AK+ + G+
Sbjct: 134 XEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GR 189
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
T + GT YLAPE L + D ++ GV+I E+ G
Sbjct: 190 ---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 89/223 (39%), Gaps = 40/223 (17%)
Query: 313 DKFSQKNFIGRGGFGLV-----------YKGILQDGTTVAVKKVIESDFQGDAEFCNEVE 361
D+F + +G G FG V Y + D V K IE NE
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-------LNEKR 93
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
I+ + LV L DN S Y+V +Y+ G + HL + +
Sbjct: 94 ILQAVNFPFLVKLEFSF---KDN---SNLYMVMEYVAGGEMFSHL-------RRIGR--F 138
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
P + + YLH + +RD+K N+L+D +V DFG AK+ + G+
Sbjct: 139 XEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GR 194
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
T + GT YLAPE L + D ++ GV+I E+ G
Sbjct: 195 ---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 89/223 (39%), Gaps = 40/223 (17%)
Query: 313 DKFSQKNFIGRGGFGLV-----------YKGILQDGTTVAVKKVIESDFQGDAEFCNEVE 361
D+F + +G G FG V Y + D V K IE NE
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-------LNEKR 93
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
I+ + LV L DN S Y+V +Y+ G + HL + +
Sbjct: 94 ILQAVNFPFLVKLEFSF---KDN---SNLYMVMEYVAGGEMFSHL-------RRIGR--F 138
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
P + + YLH + +RD+K N+L+D +V DFG AK+ + G+
Sbjct: 139 XEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GR 194
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
T + GT YLAPE L + D ++ GV+I E+ G
Sbjct: 195 ---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 108/262 (41%), Gaps = 46/262 (17%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDA-EFCNEVEIISNLKHRNLVPLRGCCV 379
+G G FG+V++ + + V V K I + + D NE+ I++ L H L+ L
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAF- 117
Query: 380 VDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLAY 439
E E L+ +++ G + D + ++ + N + +GL +
Sbjct: 118 -----EDKYEMVLILEFLSGGELFDRI--------AAEDYKMSEAEVINYMRQACEGLKH 164
Query: 440 LHYGVKPAIYHRDIKATNILLDADMRA--RVADFGLAKQSREGQSHLTTRVAGTHGYLAP 497
+H + +I H DIK NI+ + + ++ DFGLA ++ + T + AP
Sbjct: 165 MH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLA--TKLNPDEIVKVTTATAEFAAP 219
Query: 498 EYALYGQLTEKSDVYSFGVVILEIMCGRKAL----DLSTSGSPRACLITDWVWSLVKAGK 553
E + +D+++ GV+ ++ G DL T + + C DW +
Sbjct: 220 EIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRC---DWEFD------ 270
Query: 554 VWQALDPSLLKEDDFLSLNPKA 575
ED F S++P+A
Sbjct: 271 -----------EDAFSSVSPEA 281
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 89/223 (39%), Gaps = 40/223 (17%)
Query: 313 DKFSQKNFIGRGGFGLV-----------YKGILQDGTTVAVKKVIESDFQGDAEFCNEVE 361
D+F + +G G FG V Y + D V K IE NE
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-------LNEKR 114
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
I+ + LV L DN S Y+V +Y+ G + HL + +
Sbjct: 115 ILQAVNFPFLVKLEFSF---KDN---SNLYMVMEYVAGGEMFSHL-------RRIGR--F 159
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
P + + YLH + +RD+K N+L+D +V DFG AK+ + G+
Sbjct: 160 XEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GR 215
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
T + GT YLAPE L + D ++ GV+I E+ G
Sbjct: 216 ---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 94/225 (41%), Gaps = 29/225 (12%)
Query: 310 RATDKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKH 368
R +KF IG G FG +Y G +Q VA+K +E+ + E +I L+
Sbjct: 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK--LENVKTKHPQLLYESKIYRILQG 61
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKN 428
+P V+GD Y+ + V D L PS D R L+ K
Sbjct: 62 GTGIPNVRWFGVEGD----------YNVL----VMDLLGPSLEDLFNFCSRKLSL---KT 104
Query: 429 IILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRAR---VADFGLAKQSREGQSHL- 484
+++ + + + + + HRDIK N L+ RA + DFGLAK+ R+ +H
Sbjct: 105 VLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQH 164
Query: 485 -----TTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
+ GT Y + L + + + D+ S G V++ + G
Sbjct: 165 IPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRG 209
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 56/109 (51%), Gaps = 11/109 (10%)
Query: 424 PQR--KNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
P+R + + + K L YL K + HRD+K +NILLD + ++ DFG++ R
Sbjct: 122 PERILGKMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFGIS--GRLVD 177
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTE-----KSDVYSFGVVILEIMCGR 525
R AG Y+APE T+ ++DV+S G+ ++E+ G+
Sbjct: 178 DKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQ 226
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 90/204 (44%), Gaps = 25/204 (12%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGD---AEFCNEVEIISNLKH-RNLVPLRG 376
+GRG F +V + I + K ++ +G AE +E+ ++ K ++ L
Sbjct: 37 LGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHE 96
Query: 377 CCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKG 436
E SE L+ +Y G + P V++ + +I + +G
Sbjct: 97 VY------ENTSEIILILEYAAGGEIFSLCLPEL--AEMVSENDVI-----RLIKQILEG 143
Query: 437 LAYLHYGVKPAIYHRDIKATNILLDADM---RARVADFGLAKQSREGQSHLTTRVAGTHG 493
+ YLH + I H D+K NILL + ++ DFG+++ + G + + GT
Sbjct: 144 VYYLH---QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSR--KIGHACELREIMGTPE 198
Query: 494 YLAPEYALYGQLTEKSDVYSFGVV 517
YLAPE Y +T +D+++ G++
Sbjct: 199 YLAPEILNYDPITTATDMWNIGII 222
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 100/219 (45%), Gaps = 23/219 (10%)
Query: 314 KFSQKNFIGRGGFGLVYKGILQDG-TTVAVKKV-IESDFQG-DAEFCNEVEIISNLKHRN 370
K+ + IG G +G V+K ++ VA+K+V ++ D +G + E+ ++ LKH+N
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62
Query: 371 LVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNII 430
+V L D + LV+++ D L F+ +G + K+ +
Sbjct: 63 IVRLHDVLHSD------KKLTLVFEF-----CDQDLKKYFDSCNGDLDPEIV----KSFL 107
Query: 431 LDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAG 490
+ KGL + H + HRD+K N+L++ + ++A+FGLA+ + V
Sbjct: 108 FQLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV- 163
Query: 491 THGYLAPEYALYGQLTEKS-DVYSFGVVILEIMCGRKAL 528
T Y P+ +L S D++S G + E+ + L
Sbjct: 164 TLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPL 202
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 107/232 (46%), Gaps = 25/232 (10%)
Query: 306 QDLERATDKFSQKNFIGRGGFGLVYK-GILQDGTTVAVKKVIES-DFQGDAEFCNEVEI- 362
Q+ E D +GRG +G+V K + G +AVK++ + + Q +++I
Sbjct: 44 QNFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDIS 103
Query: 363 ISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLT 422
+ + V G +GD ++ + M + ++D + G + + L
Sbjct: 104 MRTVDCPFTVTFYGALFREGD------VWICMELM-DTSLDKFYKQVIDKGQTIPEDILG 156
Query: 423 WPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQS 482
I + + K L +LH K ++ HRD+K +N+L++A + ++ DFG++ + S
Sbjct: 157 -----KIAVSIVKALEHLHS--KLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVD--S 207
Query: 483 HLTTRVAGTHGYLAPEYALYGQLTE-----KSDVYSFGVVILEIMCGRKALD 529
T AG Y+APE + +L + KSD++S G+ ++E+ R D
Sbjct: 208 VAKTIDAGCKPYMAPE-RINPELNQKGYSVKSDIWSLGITMIELAILRFPYD 258
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 130/340 (38%), Gaps = 68/340 (20%)
Query: 305 IQDLERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKV-IESDFQGDAE-FCNEVEI 362
+Q+ + ++ IG+G FG VY G VA++ + IE D + + F EV
Sbjct: 25 LQEWDIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMA 82
Query: 363 ISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLT 422
+H N+V G C+ + + G L+ D AK L
Sbjct: 83 YRQTRHENVVLFMGACM-------SPPHLAIITSLCKGRT---LYSVVRD----AKIVLD 128
Query: 423 WPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQS---RE 479
+ + I ++ KG+ YLH I H+D+K+ N+ D + + + DFGL S +
Sbjct: 129 VNKTRQIAQEIVKGMGYLH---AKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQA 184
Query: 480 GQSHLTTRVA-GTHGYLAPEYALYGQL-----------TEKSDVYSFGVVILEIMCGRKA 527
G+ R+ G +LAPE + QL ++ SDV++ G + E+ A
Sbjct: 185 GRREDKLRIQNGWLCHLAPE--IIRQLSPDTEEDKLPFSKHSDVFALGTIWYEL----HA 238
Query: 528 LDLSTSGSPRACLITDWVWSLVKAGKVWQALDPSLLKEDDFLSLNPKAIMERFVLVGILC 587
+ P +I W + K +L+ + + + + C
Sbjct: 239 REWPFKTQPAEAII----WQMGTGMKP---------------NLSQIGMGKEISDILLFC 279
Query: 588 AHVMVALRPTISDALKMLEGDIEVPPLPDRPMPLGHPSFY 627
RPT + + MLE LP R L HP +
Sbjct: 280 WAFEQEERPTFTKLMDMLE------KLPKRNRRLSHPGHF 313
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 92/229 (40%), Gaps = 37/229 (16%)
Query: 306 QDLERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIES--DFQGDA---EFCNEV 360
+D E ++ IG G FG V++GI A+ I++ + D+ +F E
Sbjct: 383 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEA 442
Query: 361 EIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRP 420
+ H ++V L G + +++ + G + L
Sbjct: 443 LTMRQFDHPHIVKLIGVITENP-------VWIIMELCTLGELRSFL-------------- 481
Query: 421 LTWPQRKNIILDVAKGLAY-------LHYGVKPAIYHRDIKATNILLDADMRARVADFGL 473
Q + LD+A + Y L Y HRDI A N+L+ A ++ DFGL
Sbjct: 482 ----QVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGL 537
Query: 474 AKQSREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIM 522
++ + + ++ ++APE + + T SDV+ FGV + EI+
Sbjct: 538 SRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 90/223 (40%), Gaps = 40/223 (17%)
Query: 313 DKFSQKNFIGRGGFGLV-----------YKGILQDGTTVAVKKVIESDFQGDAEFCNEVE 361
D+F + +G G FG V Y + D V K IE NE
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-------LNEKR 93
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
I+ + LV L DN S Y+V +Y+ G + HL + +
Sbjct: 94 ILQAVNFPFLVKLEFSF---KDN---SNLYMVMEYVAGGEMFSHL-------RRIGR--F 138
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
+ P + + YLH + +RD+K N+L+D +V DFG AK+ + G+
Sbjct: 139 SEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GR 194
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
T + GT YLAPE L + D ++ GV+I ++ G
Sbjct: 195 ---TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 98/221 (44%), Gaps = 29/221 (13%)
Query: 311 ATDKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKV-IESDFQG-DAEFCNEVEIISNLK 367
+ D++ + +G G +G VYK I TVA+K++ +E + +G EV ++ L+
Sbjct: 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQ 91
Query: 368 HRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRK 427
HRN++ L+ V N R +L+++Y N L + V+ R + K
Sbjct: 92 HRNIIELKS---VIHHNHR---LHLIFEYAEND-----LKKYMDKNPDVSMRVI-----K 135
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRA-----RVADFGLAKQSREGQS 482
+ + + G+ + H HRD+K N+LL + ++ DFGLA+
Sbjct: 136 SFLYQLINGVNFCH---SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIR 192
Query: 483 HLTTRVAGTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIM 522
T + T Y PE L + S D++S + E++
Sbjct: 193 QFTHEII-TLWYRPPEILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 93/229 (40%), Gaps = 37/229 (16%)
Query: 306 QDLERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIES--DFQGDA---EFCNEV 360
+D E ++ IG G FG V++GI A+ I++ + D+ +F E
Sbjct: 383 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEA 442
Query: 361 EIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRP 420
+ H ++V L G + +++ + G + L
Sbjct: 443 LTMRQFDHPHIVKLIGVITENP-------VWIIMELCTLGELRSFL-------------- 481
Query: 421 LTWPQRKNIILDVAKGLAY-------LHYGVKPAIYHRDIKATNILLDADMRARVADFGL 473
Q + LD+A + Y L Y HRDI A N+L+ ++ ++ DFGL
Sbjct: 482 ----QVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGL 537
Query: 474 AKQSREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIM 522
++ + + ++ ++APE + + T SDV+ FGV + EI+
Sbjct: 538 SRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 90/223 (40%), Gaps = 40/223 (17%)
Query: 313 DKFSQKNFIGRGGFGLV-----------YKGILQDGTTVAVKKVIESDFQGDAEFCNEVE 361
D+F + +G G FG V Y + D V K IE NE
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-------LNEKR 93
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
I+ + LV L DN S Y+V +Y+ G + HL + +
Sbjct: 94 ILQAVNFPFLVKLEFSF---KDN---SNLYMVMEYVAGGEMFSHL-------RRIGR--F 138
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
+ P + + YLH + +RD+K N+++D +V DFG AK+ + G+
Sbjct: 139 SEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVK-GR 194
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
T + GT YLAPE + + D ++ GV+I E+ G
Sbjct: 195 ---TWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 107/245 (43%), Gaps = 41/245 (16%)
Query: 297 NTGSIWFKIQDLERATDKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQGDAE 355
+T S+ K +D+ + T + +G G + V + LQ+G AVK + + +
Sbjct: 2 STDSLPGKFEDMYKLTSEL-----LGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSR 56
Query: 356 FCNEVEIISNLK-HRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGS 414
EVE + + ++N++ L E + YLV++ + G++ H+ +
Sbjct: 57 VFREVETLYQCQGNKNILELIEFF------EDDTRFYLVFEKLQGGSILAHIQKQKHFNE 110
Query: 415 GVAKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMR---ARVADF 471
A R ++ DVA L +LH I HRD+K NIL ++ + ++ DF
Sbjct: 111 REASR---------VVRDVAAALDFLH---TKGIAHRDLKPENILCESPEKVSPVKICDF 158
Query: 472 GLAKQSREGQS-------HLTTRVAGTHGYLAPEY--ALYGQLT---EKSDVYSFGVVIL 519
L + S LTT G+ Y+APE Q T ++ D++S GVV+
Sbjct: 159 DLGSGMKLNNSCTPITTPELTT-PCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLY 217
Query: 520 EIMCG 524
++ G
Sbjct: 218 IMLSG 222
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 102/263 (38%), Gaps = 31/263 (11%)
Query: 305 IQDLERA----TDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEV 360
+Q L R TD + K IG G + + + I + K+I+ + E E+
Sbjct: 10 VQQLHRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTE---EI 66
Query: 361 EIISNL-KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKR 419
EI+ +H N++ L+ + G Y+V + G + D + ++
Sbjct: 67 EILLRYGQHPNIITLKDVY------DDGKYVYVVTELXKGGELLDKIL---------RQK 111
Query: 420 PLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADM----RARVADFGLAK 475
+ + ++ + K + YLH + HRD+K +NIL + R+ DFG AK
Sbjct: 112 FFSEREASAVLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAK 168
Query: 476 QSREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLSTSGS 535
Q R L T T ++APE D++S GV++ + G +
Sbjct: 169 QLRAENGLLXTPCY-TANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDT 227
Query: 536 PRACLITDWVWSLVKAGKVWQAL 558
P L +G W ++
Sbjct: 228 PEEILARIGSGKFSLSGGYWNSV 250
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 95/221 (42%), Gaps = 24/221 (10%)
Query: 313 DKFSQKNFIGRGGFGLVYKGILQD-GTTVAVKKVIESDFQGD-----AEFCNEVEIISNL 366
D + IG+G F +V + I ++ G AVK V + F + E I L
Sbjct: 24 DVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 83
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQR 426
KH ++V L DG Y+V+++M ++ + + G ++ + R
Sbjct: 84 KHPHIVELLETYSSDG------MLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR 137
Query: 427 KNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRA---RVADFGLAKQSREGQSH 483
+ + + L Y H I HRD+K N+LL + + ++ DFG+A Q E
Sbjct: 138 Q-----ILEALRYCH---DNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLV 189
Query: 484 LTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
RV GT ++APE + DV+ GV++ ++ G
Sbjct: 190 AGGRV-GTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 93/211 (44%), Gaps = 31/211 (14%)
Query: 321 IGRGGFGLVYK-GILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPLRGCCV 379
+GRG FG V++ Q G AVKKV F+ + E+ + L +VPL G V
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAE-----ELMACAGLTSPRIVPLYGA-V 154
Query: 380 VDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVA-KGLA 438
+G P N+ L + G V ++ R L A +GL
Sbjct: 155 REG---------------PWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLE 199
Query: 439 YLHYGVKPAIYHRDIKATNILLDAD-MRARVADFGLA---KQSREGQSHLTTR-VAGTHG 493
YLH I H D+KA N+LL +D A + DFG A + G+S LT + GT
Sbjct: 200 YLH---SRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTET 256
Query: 494 YLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
++APE L K DV+S ++L ++ G
Sbjct: 257 HMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 287
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 90/215 (41%), Gaps = 22/215 (10%)
Query: 313 DKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFC-NEVEIISNLKHRNL 371
D + +G G FG+V++ + K + + + D E E++ +S L+H L
Sbjct: 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 216
Query: 372 VPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIIL 431
V L E +E ++Y++M G + + + N ++ + +
Sbjct: 217 VNLHDAF------EDDNEMVMIYEFMSGGELFEKVADEHNK--------MSEDEAVEYMR 262
Query: 432 DVAKGLAYLHYGVKPAIYHRDIKATNILLDADM--RARVADFGLAKQSREGQSHLTTRVA 489
V KGL ++H + H D+K NI+ ++ DFGL QS T
Sbjct: 263 QVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVT--T 317
Query: 490 GTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
GT + APE A + +D++S GV+ ++ G
Sbjct: 318 GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSG 352
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 94/217 (43%), Gaps = 31/217 (14%)
Query: 315 FSQKNFIGRGGFGLVYK-GILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVP 373
+ + +GRG FG V++ Q G AVKKV F+ E+ + L +VP
Sbjct: 60 MTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVP 114
Query: 374 LRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDV 433
L G V +G P N+ L + G + + R L
Sbjct: 115 LYGA-VREG---------------PWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQ 158
Query: 434 A-KGLAYLHYGVKPAIYHRDIKATNILLDAD-MRARVADFGLA---KQSREGQSHLTT-R 487
A +GL YLH I H D+KA N+LL +D RA + DFG A + G+S LT
Sbjct: 159 ALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDY 215
Query: 488 VAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
+ GT ++APE + K D++S ++L ++ G
Sbjct: 216 IPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 252
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 94/217 (43%), Gaps = 31/217 (14%)
Query: 315 FSQKNFIGRGGFGLVYK-GILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVP 373
+ + +GRG FG V++ Q G AVKKV F+ E+ + L +VP
Sbjct: 76 MTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVP 130
Query: 374 LRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDV 433
L G V +G P N+ L + G + + R L
Sbjct: 131 LYGA-VREG---------------PWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQ 174
Query: 434 A-KGLAYLHYGVKPAIYHRDIKATNILLDAD-MRARVADFGLA---KQSREGQSHLTT-R 487
A +GL YLH I H D+KA N+LL +D RA + DFG A + G+S LT
Sbjct: 175 ALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDY 231
Query: 488 VAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
+ GT ++APE + K D++S ++L ++ G
Sbjct: 232 IPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 268
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 49/99 (49%), Gaps = 16/99 (16%)
Query: 431 LDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQ-------SREGQSH 483
VAKG+ +L HRD+ A NILL ++ DFGLA+ R+G +
Sbjct: 198 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 254
Query: 484 LTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIM 522
L + ++APE T +SDV+SFGV++ EI
Sbjct: 255 LPLK------WMAPETIFDRVYTIQSDVWSFGVLLWEIF 287
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 49/99 (49%), Gaps = 16/99 (16%)
Query: 431 LDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQ-------SREGQSH 483
VAKG+ +L HRD+ A NILL ++ DFGLA+ R+G +
Sbjct: 200 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 256
Query: 484 LTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIM 522
L + ++APE T +SDV+SFGV++ EI
Sbjct: 257 LPLK------WMAPETIFDRVYTIQSDVWSFGVLLWEIF 289
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 16/98 (16%)
Query: 431 LDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQ-------SREGQSH 483
VAKG+ +L HRD+ A NILL ++ DFGLA+ R+G +
Sbjct: 205 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 261
Query: 484 LTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEI 521
L + ++APE T +SDV+SFGV++ EI
Sbjct: 262 LPLK------WMAPETIFDRVYTIQSDVWSFGVLLWEI 293
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 16/98 (16%)
Query: 431 LDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQ-------SREGQSH 483
VAKG+ +L HRD+ A NILL ++ DFGLA+ R+G +
Sbjct: 207 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 263
Query: 484 LTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEI 521
L + ++APE T +SDV+SFGV++ EI
Sbjct: 264 LPLK------WMAPETIFDRVYTIQSDVWSFGVLLWEI 295
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 108/238 (45%), Gaps = 53/238 (22%)
Query: 318 KNFIGRGGFG-LVYKGILQDGTTVAVKKVIESDFQGDAEFCN----EVEIISNLK-HRNL 371
+ +G G G +V++G Q G VAVK+++ +FC+ E+++++ H N+
Sbjct: 38 EKILGYGSSGTVVFQGSFQ-GRPVAVKRML-------IDFCDIALMEIKLLTESDDHPNV 89
Query: 372 VPLRGCCVVDGDNERGSERYL-VYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKN-- 428
+ R C ++R+L + + N N+ D + + V+ L + N
Sbjct: 90 I--RYYC------SETTDRFLYIALELCNLNLQDLV-----ESKNVSDENLKLQKEYNPI 136
Query: 429 -IILDVAKGLAYLHYGVKPAIYHRDIKATNILLDA-------------DMRARVADFGLA 474
++ +A G+A+LH I HRD+K NIL+ ++R ++DFGL
Sbjct: 137 SLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLC 193
Query: 475 KQSREGQSHLTTRV---AGTHGYLAPEY---ALYGQLTEKSDVYSFGVVILEIMCGRK 526
K+ GQ + +GT G+ APE + +LT D++S G V I+ K
Sbjct: 194 KKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGK 251
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 108/238 (45%), Gaps = 53/238 (22%)
Query: 318 KNFIGRGGFG-LVYKGILQDGTTVAVKKVIESDFQGDAEFCN----EVEIISNLK-HRNL 371
+ +G G G +V++G Q G VAVK+++ +FC+ E+++++ H N+
Sbjct: 38 EKILGYGSSGTVVFQGSFQ-GRPVAVKRML-------IDFCDIALMEIKLLTESDDHPNV 89
Query: 372 VPLRGCCVVDGDNERGSERYL-VYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKN-- 428
+ R C ++R+L + + N N+ D + + V+ L + N
Sbjct: 90 I--RYYC------SETTDRFLYIALELCNLNLQDLV-----ESKNVSDENLKLQKEYNPI 136
Query: 429 -IILDVAKGLAYLHYGVKPAIYHRDIKATNILLDA-------------DMRARVADFGLA 474
++ +A G+A+LH I HRD+K NIL+ ++R ++DFGL
Sbjct: 137 SLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLC 193
Query: 475 KQSREGQSHLTTRV---AGTHGYLAPEY---ALYGQLTEKSDVYSFGVVILEIMCGRK 526
K+ GQ + +GT G+ APE + +LT D++S G V I+ K
Sbjct: 194 KKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGK 251
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 90/215 (41%), Gaps = 22/215 (10%)
Query: 313 DKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFC-NEVEIISNLKHRNL 371
D + +G G FG+V++ + K + + + D E E++ +S L+H L
Sbjct: 51 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 110
Query: 372 VPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIIL 431
V L E +E ++Y++M G + + + N ++ + +
Sbjct: 111 VNLHDAF------EDDNEMVMIYEFMSGGELFEKVADEHNK--------MSEDEAVEYMR 156
Query: 432 DVAKGLAYLHYGVKPAIYHRDIKATNILLDADM--RARVADFGLAKQSREGQSHLTTRVA 489
V KGL ++H + H D+K NI+ ++ DFGL QS T
Sbjct: 157 QVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVT--T 211
Query: 490 GTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
GT + APE A + +D++S GV+ ++ G
Sbjct: 212 GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSG 246
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 89/223 (39%), Gaps = 40/223 (17%)
Query: 313 DKFSQKNFIGRGGFGLV-----------YKGILQDGTTVAVKKVIESDFQGDAEFCNEVE 361
D+F + +G G FG V Y + D V K IE NE
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-------LNEKR 93
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
I+ + LV L DN S Y+V +Y+ G + HL + +
Sbjct: 94 ILQAVNFPFLVKLEFSF---KDN---SNLYMVMEYVAGGEMFSHL-------RRIGR--F 138
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
+ P + + YLH + +RD+K N+L+D +V DFG AK+ + G+
Sbjct: 139 SEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GR 194
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
T + GT YLAP L + D ++ GV+I E+ G
Sbjct: 195 ---TWXLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 94/217 (43%), Gaps = 31/217 (14%)
Query: 315 FSQKNFIGRGGFGLVYK-GILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVP 373
+ + +GRG FG V++ Q G AVKKV F+ E+ + L +VP
Sbjct: 74 MTHQPRLGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVP 128
Query: 374 LRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDV 433
L G V +G P N+ L + G + + R L
Sbjct: 129 LYGA-VREG---------------PWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQ 172
Query: 434 A-KGLAYLHYGVKPAIYHRDIKATNILLDAD-MRARVADFGLA---KQSREGQSHLTT-R 487
A +GL YLH I H D+KA N+LL +D RA + DFG A + G+S LT
Sbjct: 173 ALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDY 229
Query: 488 VAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
+ GT ++APE + K D++S ++L ++ G
Sbjct: 230 IPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 266
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 97/231 (41%), Gaps = 28/231 (12%)
Query: 305 IQDLERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIIS 364
+++++ + F IGRG FG V +++ + K++ E E
Sbjct: 66 VKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNK-----WEMLKRAETAC 120
Query: 365 NLKHRNLVPLRGCCVVDGDN---ERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
+ R+++ C + + + + YLV DY G++ L F D K P
Sbjct: 121 FREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLT-LLSKFED-----KLPE 174
Query: 422 TWPQR--KNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSRE 479
+ ++L + + LHY HRDIK N+LLD + R+ADFG + +
Sbjct: 175 DMARFYIGEMVLAI-DSIHQLHY------VHRDIKPDNVLLDVNGHIRLADFGSCLKMND 227
Query: 480 GQSHLTTRVAGTHGYLAPEYAL-----YGQLTEKSDVYSFGVVILEIMCGR 525
+ ++ GT Y++PE G+ + D +S GV + E++ G
Sbjct: 228 DGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE 278
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 108/271 (39%), Gaps = 57/271 (21%)
Query: 300 SIWFKIQDLERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESD-----FQGDA 354
+++F+ L K+ K IG+G +G+V I + K++ + D
Sbjct: 13 NLYFQGGSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDV 72
Query: 355 E-FCNEVEIISNLKHRNLVPLRGCCVVDGDNERGSERY--LVYDYMPNGNVDDHLFPSFN 411
E EV ++ L H N+ L E+Y LV + G++ D L +
Sbjct: 73 ERIKTEVRLMKKLHHPNIARLYEV--------YEDEQYICLVMELCHGGHLLDKLNVFID 124
Query: 412 DGSGVA---------------------------KRPLTWPQRKNIILDVAKGL-AYLHYG 443
D +G + L + QR+ +I ++ + + + LHY
Sbjct: 125 DSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYL 184
Query: 444 VKPAIYHRDIKATNILLDAD--MRARVADFGLAKQS---REGQSHLTTRVAGTHGYLAPE 498
I HRDIK N L + ++ DFGL+K+ G+ + T AGT ++APE
Sbjct: 185 HNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPE 244
Query: 499 Y-----ALYGQLTEKSDVYSFGVVILEIMCG 524
YG K D +S GV++ ++ G
Sbjct: 245 VLNTTNESYG---PKCDAWSAGVLLHLLLMG 272
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 97/231 (41%), Gaps = 28/231 (12%)
Query: 305 IQDLERATDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIIS 364
+++++ + F IGRG FG V +++ + K++ E E
Sbjct: 82 VKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNK-----WEMLKRAETAC 136
Query: 365 NLKHRNLVPLRGCCVVDGDN---ERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
+ R+++ C + + + + YLV DY G++ L F D K P
Sbjct: 137 FREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLT-LLSKFED-----KLPE 190
Query: 422 TWPQR--KNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSRE 479
+ ++L + + LHY HRDIK N+LLD + R+ADFG + +
Sbjct: 191 DMARFYIGEMVLAI-DSIHQLHY------VHRDIKPDNVLLDVNGHIRLADFGSCLKMND 243
Query: 480 GQSHLTTRVAGTHGYLAPEYAL-----YGQLTEKSDVYSFGVVILEIMCGR 525
+ ++ GT Y++PE G+ + D +S GV + E++ G
Sbjct: 244 DGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE 294
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 92/217 (42%), Gaps = 25/217 (11%)
Query: 312 TDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNL 371
+D++ IG G FG+ + + K IE + D E+ +L+H N+
Sbjct: 18 SDRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSLRHPNI 77
Query: 372 VPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIIL 431
V + + + +V +Y G + + + N G + + +
Sbjct: 78 VRFKEVILT------PTHLAIVMEYASGGELFERI---CNAGR------FSEDEARFFFQ 122
Query: 432 DVAKGLAYLHYGVKPAIYHRDIKATNILLDAD--MRARVADFGLAKQSREGQSHLTTRVA 489
+ G++Y H + HRD+K N LLD R ++ADFG +K S H + A
Sbjct: 123 QLISGVSYAHAM---QVAHRDLKLENTLLDGSPAPRLKIADFGYSKAS---VLHSQPKSA 176
Query: 490 -GTHGYLAPEYALYGQLTEK-SDVYSFGVVILEIMCG 524
GT Y+APE L + K +DV+S GV + ++ G
Sbjct: 177 VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 107/242 (44%), Gaps = 57/242 (23%)
Query: 318 KNFIGRGGFG-LVYKGILQDGTTVAVKKVIESDFQGDAEFCN----EVEIISNLK-HRNL 371
+ +G G G +V++G Q G VAVK+++ +FC+ E+++++ H N+
Sbjct: 20 EKILGYGSSGTVVFQGSFQ-GRPVAVKRML-------IDFCDIALMEIKLLTESDDHPNV 71
Query: 372 VPLRGCCVVDGDNERGSERYL-VYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKN-- 428
+ R C ++R+L + + N N+ D + + V+ L + N
Sbjct: 72 I--RYYC------SETTDRFLYIALELCNLNLQDLV-----ESKNVSDENLKLQKEYNPI 118
Query: 429 -IILDVAKGLAYLHYGVKPAIYHRDIKATNILLDA-------------DMRARVADFGLA 474
++ +A G+A+LH I HRD+K NIL+ ++R ++DFGL
Sbjct: 119 SLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLC 175
Query: 475 KQSREGQSHLTTRV---AGTHGYLAPE-------YALYGQLTEKSDVYSFGVVILEIMCG 524
K+ GQ + +GT G+ APE +LT D++S G V I+
Sbjct: 176 KKLDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSK 235
Query: 525 RK 526
K
Sbjct: 236 GK 237
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 89/223 (39%), Gaps = 40/223 (17%)
Query: 313 DKFSQKNFIGRGGFGLV-----------YKGILQDGTTVAVKKVIESDFQGDAEFCNEVE 361
D+F + +G G FG V Y + D V K IE NE
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-------LNEKR 93
Query: 362 IISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
I+ + LV L DN S Y+V +Y+ G + HL + +
Sbjct: 94 ILQAVNFPFLVKLEFSF---KDN---SNLYMVMEYVAGGEMFSHL-------RRIGR--F 138
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQ 481
+ P + + YLH + +RD+K N+L+D +V DFG AK+ + G+
Sbjct: 139 SEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GR 194
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
T + GT LAPE L + D ++ GV+I E+ G
Sbjct: 195 ---TWXLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 59/112 (52%), Gaps = 20/112 (17%)
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTR 487
I + + K L +LH K ++ HRD+K +N+L++A + ++ DFG++ +L
Sbjct: 113 KIAVSIVKALEHLHS--KLSVIHRDVKPSNVLINALGQVKMCDFGIS-------GYLVDD 163
Query: 488 V-----AGTHGYLAPEYALYGQLTE-----KSDVYSFGVVILEIMCGRKALD 529
V AG Y+APE + +L + KSD++S G+ ++E+ R D
Sbjct: 164 VAKDIDAGCKPYMAPE-RINPELNQKGYSVKSDIWSLGITMIELAILRFPYD 214
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 92/211 (43%), Gaps = 31/211 (14%)
Query: 321 IGRGGFGLVYK-GILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPLRGCCV 379
+GRG FG V++ Q G AVKKV F+ + E+ + L +VPL G V
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAE-----ELMACAGLTSPRIVPLYGA-V 135
Query: 380 VDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVA-KGLA 438
+G P N+ L + G V ++ R L A +GL
Sbjct: 136 REG---------------PWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLE 180
Query: 439 YLHYGVKPAIYHRDIKATNILLDAD-MRARVADFGLA---KQSREGQSHLTTR-VAGTHG 493
YLH I H D+KA N+LL +D A + DFG A + G+ LT + GT
Sbjct: 181 YLH---SRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTET 237
Query: 494 YLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
++APE L K DV+S ++L ++ G
Sbjct: 238 HMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 268
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 93/221 (42%), Gaps = 27/221 (12%)
Query: 314 KFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDF-------QGDAEFCNEVEIISNL 366
K+ + +G G +G V K +L D T+ + V G+A E++++ L
Sbjct: 6 KYLMGDLLGEGSYGKV-KEVL-DSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRL 63
Query: 367 KHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQR 426
+H+N++ L NE + Y+V +Y G + + L V ++ Q
Sbjct: 64 RHKNVIQLVDVLY----NEEKQKMYMVMEYCVCG-MQEML-------DSVPEKRFPVCQA 111
Query: 427 KNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTT 486
+ GL YLH I H+DIK N+LL +++ G+A+ + T
Sbjct: 112 HGYFCQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTC 168
Query: 487 RVA-GTHGYLAPEYA--LYGQLTEKSDVYSFGVVILEIMCG 524
R + G+ + PE A L K D++S GV + I G
Sbjct: 169 RTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTG 209
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 95/219 (43%), Gaps = 29/219 (13%)
Query: 312 TDKFSQKNFIGRGGFGLVYKGILQDGTT---VAVKKVIESDFQGDAEFCNEVEIISNLKH 368
+D++ IG G FG+ +++D T VAVK IE D E+ +L+H
Sbjct: 19 SDRYDFVKDIGSGNFGVAR--LMRDKLTKELVAVK-YIERGAAIDENVQREIINHRSLRH 75
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKN 428
N+V + + + ++ +Y G + + + N G + + +
Sbjct: 76 PNIVRFKEVILT------PTHLAIIMEYASGGELYERIC---NAGR------FSEDEARF 120
Query: 429 IILDVAKGLAYLHYGVKPAIYHRDIKATNILLDAD--MRARVADFGLAKQSREGQSHLTT 486
+ G++Y H I HRD+K N LLD R ++ DFG +K S +T
Sbjct: 121 FFQQLLSGVSYCH---SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST 177
Query: 487 RVAGTHGYLAPEYALYGQLTEK-SDVYSFGVVILEIMCG 524
GT Y+APE L + K +DV+S GV + ++ G
Sbjct: 178 --VGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVG 214
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 92/215 (42%), Gaps = 23/215 (10%)
Query: 315 FSQKNFIGR---GGFGLVYKGILQ-DGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRN 370
F Q NF+ + G ++KG Q + V V KV + + +F E + H N
Sbjct: 9 FKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPN 68
Query: 371 LVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNII 430
++P+ G C + L+ + P G+ L+ ++G+ + Q
Sbjct: 69 VLPVLGAC----QSPPAPHPTLITHWXPYGS----LYNVLHEGTNFV---VDQSQAVKFA 117
Query: 431 LDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARV--ADFGLAKQSREGQSHLTTRV 488
LD A+G A+LH ++P I + + ++ +D D AR+ AD + QS G+ + V
Sbjct: 118 LDXARGXAFLH-TLEPLIPRHALNSRSVXIDEDXTARISXADVKFSFQS-PGRXYAPAWV 175
Query: 489 AGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMC 523
A PE +D +SF V++ E++
Sbjct: 176 APEALQKKPE----DTNRRSADXWSFAVLLWELVT 206
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%)
Query: 450 HRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGYLAPEYALYGQLTEKS 509
HRD+K NIL+ AD A + DFG+A + + + GT Y APE T ++
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYRA 216
Query: 510 DVYSFGVVILEIMCG 524
D+Y+ V+ E + G
Sbjct: 217 DIYALTCVLYECLTG 231
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 74/172 (43%), Gaps = 27/172 (15%)
Query: 359 EVEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAK 418
E+EI+ L H ++ ++ D ++ Y+V + M G + D + V
Sbjct: 204 EIEILKKLNHPCIIKIKN--FFDAED-----YYIVLELMEGGELFDKV---------VGN 247
Query: 419 RPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILL---DADMRARVADFGLAK 475
+ L K + + YLH + I HRD+K N+LL + D ++ DFG +K
Sbjct: 248 KRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 304
Query: 476 QSREGQSHLTTRVAGTHGYLAPEYAL---YGQLTEKSDVYSFGVVILEIMCG 524
G++ L + GT YLAPE + D +S GV++ + G
Sbjct: 305 IL--GETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 354
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 74/172 (43%), Gaps = 27/172 (15%)
Query: 359 EVEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAK 418
E+EI+ L H ++ ++ D ++ Y+V + M G + D + V
Sbjct: 190 EIEILKKLNHPCIIKIKN--FFDAED-----YYIVLELMEGGELFDKV---------VGN 233
Query: 419 RPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILL---DADMRARVADFGLAK 475
+ L K + + YLH + I HRD+K N+LL + D ++ DFG +K
Sbjct: 234 KRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 290
Query: 476 QSREGQSHLTTRVAGTHGYLAPEYAL---YGQLTEKSDVYSFGVVILEIMCG 524
G++ L + GT YLAPE + D +S GV++ + G
Sbjct: 291 IL--GETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 340
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 90/216 (41%), Gaps = 23/216 (10%)
Query: 312 TDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNL 371
+D++ IG G FG+ + + K IE + D E+ +L+H N+
Sbjct: 17 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNI 76
Query: 372 VPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIIL 431
V + + + +V +Y G + + + N G + + +
Sbjct: 77 VRFKEVILT------PTHLAIVMEYASGGELFERI---CNAGR------FSEDEARFFFQ 121
Query: 432 DVAKGLAYLHYGVKPAIYHRDIKATNILLDAD--MRARVADFGLAKQSREGQSHLTTRVA 489
+ G++Y H + HRD+K N LLD R ++ DFG +K S +T
Sbjct: 122 QLISGVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST--V 176
Query: 490 GTHGYLAPEYALYGQLTEK-SDVYSFGVVILEIMCG 524
GT Y+APE L + K +DV+S GV + ++ G
Sbjct: 177 GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 212
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 74/173 (42%), Gaps = 27/173 (15%)
Query: 358 NEVEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVA 417
E+EI+ L H ++ ++ D ++ Y+V + M G + D + V
Sbjct: 64 TEIEILKKLNHPCIIKIKN--FFDAED-----YYIVLELMEGGELFDKV---------VG 107
Query: 418 KRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILL---DADMRARVADFGLA 474
+ L K + + YLH + I HRD+K N+LL + D ++ DFG +
Sbjct: 108 NKRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS 164
Query: 475 KQSREGQSHLTTRVAGTHGYLAPEYAL---YGQLTEKSDVYSFGVVILEIMCG 524
K G++ L + GT YLAPE + D +S GV++ + G
Sbjct: 165 KIL--GETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 74/173 (42%), Gaps = 27/173 (15%)
Query: 358 NEVEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVA 417
E+EI+ L H ++ ++ D ++ Y+V + M G + D + V
Sbjct: 64 TEIEILKKLNHPCIIKIKN--FFDAED-----YYIVLELMEGGELFDKV---------VG 107
Query: 418 KRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILL---DADMRARVADFGLA 474
+ L K + + YLH + I HRD+K N+LL + D ++ DFG +
Sbjct: 108 NKRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS 164
Query: 475 KQSREGQSHLTTRVAGTHGYLAPEYAL---YGQLTEKSDVYSFGVVILEIMCG 524
K G++ L + GT YLAPE + D +S GV++ + G
Sbjct: 165 KIL--GETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 74/173 (42%), Gaps = 27/173 (15%)
Query: 358 NEVEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVA 417
E+EI+ L H ++ ++ D ++ Y+V + M G + D + V
Sbjct: 64 TEIEILKKLNHPCIIKIKN--FFDAED-----YYIVLELMEGGELFDKV---------VG 107
Query: 418 KRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILL---DADMRARVADFGLA 474
+ L K + + YLH + I HRD+K N+LL + D ++ DFG +
Sbjct: 108 NKRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS 164
Query: 475 KQSREGQSHLTTRVAGTHGYLAPEYAL---YGQLTEKSDVYSFGVVILEIMCG 524
K G++ L + GT YLAPE + D +S GV++ + G
Sbjct: 165 KIL--GETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 74/173 (42%), Gaps = 27/173 (15%)
Query: 358 NEVEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVA 417
E+EI+ L H ++ ++ D ++ Y+V + M G + D + V
Sbjct: 63 TEIEILKKLNHPCIIKIKN--FFDAED-----YYIVLELMEGGELFDKV---------VG 106
Query: 418 KRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILL---DADMRARVADFGLA 474
+ L K + + YLH + I HRD+K N+LL + D ++ DFG +
Sbjct: 107 NKRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS 163
Query: 475 KQSREGQSHLTTRVAGTHGYLAPEYAL---YGQLTEKSDVYSFGVVILEIMCG 524
K G++ L + GT YLAPE + D +S GV++ + G
Sbjct: 164 KIL--GETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 214
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 74/173 (42%), Gaps = 27/173 (15%)
Query: 358 NEVEIISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVA 417
E+EI+ L H ++ ++ D ++ Y+V + M G + D + V
Sbjct: 70 TEIEILKKLNHPCIIKIKN--FFDAED-----YYIVLELMEGGELFDKV---------VG 113
Query: 418 KRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILL---DADMRARVADFGLA 474
+ L K + + YLH + I HRD+K N+LL + D ++ DFG +
Sbjct: 114 NKRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS 170
Query: 475 KQSREGQSHLTTRVAGTHGYLAPEYAL---YGQLTEKSDVYSFGVVILEIMCG 524
K G++ L + GT YLAPE + D +S GV++ + G
Sbjct: 171 KIL--GETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 221
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 110/265 (41%), Gaps = 58/265 (21%)
Query: 308 LERATDKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQGDAEFCN-EVEIISN 365
LE ++ K+S +G G FG+V + ++ G A+KKV++ D + N E++I+
Sbjct: 2 LETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQ-----DPRYKNRELDIMKV 56
Query: 366 LKHRNLVPLRGCCVVDGDNER------------------------------GSERYL--V 393
L H N++ L GD E +YL +
Sbjct: 57 LDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVI 116
Query: 394 YDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDI 453
+Y+P+ + L G + ++ I + + + ++H I HRDI
Sbjct: 117 MEYVPD-TLHKVLKSFIRSGRSIPMNLISI-----YIYQLFRAVGFIH---SLGICHRDI 167
Query: 454 KATNILLDA-DMRARVADFGLAKQ---SREGQSHLTTRVAGTHGYLAPEYALYG-QLTEK 508
K N+L+++ D ++ DFG AK+ S + + +R Y APE L + T
Sbjct: 168 KPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAXICSRF-----YRAPELMLGATEYTPS 222
Query: 509 SDVYSFGVVILEIMCGRKALDLSTS 533
D++S G V E++ G+ TS
Sbjct: 223 IDLWSIGCVFGELILGKPLFSGETS 247
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 107/249 (42%), Gaps = 37/249 (14%)
Query: 296 PNTGSIWFK--IQDLERATDKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIES-DFQ 351
P T +++F+ ++ E D +GRG +G+V K + G AVK++ + + Q
Sbjct: 15 PTTENLYFQGAXENFEVKADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQ 74
Query: 352 GDAEFCNEVEI-ISNLKHRNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSF 410
+++I + V G +GD + + + ++D
Sbjct: 75 EQKRLLXDLDISXRTVDCPFTVTFYGALFREGD-------VWICXELXDTSLDKFYKQVI 127
Query: 411 NDGSGVAKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVAD 470
+ G + + L I + + K L +LH K ++ HRD+K +N+L++A + + D
Sbjct: 128 DKGQTIPEDILG-----KIAVSIVKALEHLHS--KLSVIHRDVKPSNVLINALGQVKXCD 180
Query: 471 FGLAKQSREGQSHLTTRV-----AGTHGYLAPEYALYGQLTE-----KSDVYSFGVVILE 520
FG++ +L V AG Y APE + +L + KSD++S G+ +E
Sbjct: 181 FGIS-------GYLVDDVAKDIDAGCKPYXAPE-RINPELNQKGYSVKSDIWSLGITXIE 232
Query: 521 IMCGRKALD 529
+ R D
Sbjct: 233 LAILRFPYD 241
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 90/216 (41%), Gaps = 23/216 (10%)
Query: 312 TDKFSQKNFIGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNL 371
+D++ IG G FG+ + + K IE + A E+ +L+H N+
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREIINHRSLRHPNI 77
Query: 372 VPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIIL 431
V + + + +V +Y G + + + N G + + +
Sbjct: 78 VRFKEVILT------PTHLAIVMEYASGGELFERIC---NAGR------FSEDEARFFFQ 122
Query: 432 DVAKGLAYLHYGVKPAIYHRDIKATNILLDAD--MRARVADFGLAKQSREGQSHLTTRVA 489
+ G++Y H + HRD+K N LLD R ++ DFG +K S +T
Sbjct: 123 QLISGVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST--V 177
Query: 490 GTHGYLAPEYALYGQLTEK-SDVYSFGVVILEIMCG 524
GT Y+APE L + K +DV+S GV + ++ G
Sbjct: 178 GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILL---DADMRARVADFGLAKQSREGQSHL 484
I+ D+ + +LH I HRD+K N+L + D ++ DFG AK++ Q+ L
Sbjct: 132 EIMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETT--QNAL 186
Query: 485 TTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
T T Y+APE + + D++S GV++ ++CG
Sbjct: 187 QTPCY-TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 225
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 94/225 (41%), Gaps = 21/225 (9%)
Query: 306 QDLERATDKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQGDAEFCNEVEIIS 364
++ E ++ +G GGFG VY GI + D VA+K V + E N +
Sbjct: 1 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 60
Query: 365 NLKHRNLVP--LRGCCVVDGDNERGSERYLVYDYM-PNGNVDDHLFPSFNDGSGVAKRPL 421
+ V G + ER L+ + M P ++ D F G + L
Sbjct: 61 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFD-----FITERGALQEEL 115
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADM-RARVADFGLAKQSREG 480
++ V + + + H + HRDIK NIL+D + ++ DFG ++
Sbjct: 116 A----RSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 168
Query: 481 QSHLTTRVAGTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMCG 524
+ T GT Y PE+ Y + +S V+S G+++ +++CG
Sbjct: 169 ---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 210
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILL---DADMRARVADFGLAKQSREGQSHL 484
I+ D+ + +LH I HRD+K N+L + D ++ DFG AK++ Q+ L
Sbjct: 113 EIMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKET--TQNAL 167
Query: 485 TTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
T T Y+APE + + D++S GV++ ++CG
Sbjct: 168 QTPCY-TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 206
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 91/225 (40%), Gaps = 29/225 (12%)
Query: 310 RATDKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKH 368
R +++ IG G FG +Y G + G VA+K +E + E +I ++
Sbjct: 6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIK--LECVKTKHPQLHIESKIYKMMQG 63
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKN 428
+P C +GD Y+ M V + L PS D R + K
Sbjct: 64 GVGIPTIRWCGAEGD----------YNVM----VMELLGPSLEDLFNFCSRKFSL---KT 106
Query: 429 IILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRAR---VADFGLAKQSREGQSHL- 484
++L + ++ + Y HRD+K N L+ + + DFGLAK+ R+ ++H
Sbjct: 107 VLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQH 166
Query: 485 -----TTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
+ GT Y + L + + + D+ S G V++ G
Sbjct: 167 IPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLG 211
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 91/225 (40%), Gaps = 29/225 (12%)
Query: 310 RATDKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKH 368
R +++ IG G FG +Y G + G VA+K +E + E +I ++
Sbjct: 4 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIK--LECVKTKHPQLHIESKIYKMMQG 61
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKN 428
+P C +GD Y+ M V + L PS D R + K
Sbjct: 62 GVGIPTIRWCGAEGD----------YNVM----VMELLGPSLEDLFNFCSRKFSL---KT 104
Query: 429 IILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRAR---VADFGLAKQSREGQSHL- 484
++L + ++ + Y HRD+K N L+ + + DFGLAK+ R+ ++H
Sbjct: 105 VLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQH 164
Query: 485 -----TTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
+ GT Y + L + + + D+ S G V++ G
Sbjct: 165 IPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLG 209
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 90/225 (40%), Gaps = 29/225 (12%)
Query: 310 RATDKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKH 368
R +K+ IG G FG +Y G + G VA+K +E + E + ++
Sbjct: 6 RVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIK--LECVKTKHPQLHIESKFYKMMQG 63
Query: 369 RNLVPLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKN 428
+P C +GD Y+ M V + L PS D R + K
Sbjct: 64 GVGIPSIKWCGAEGD----------YNVM----VMELLGPSLEDLFNFCSRKFSL---KT 106
Query: 429 IILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRAR---VADFGLAKQSREGQSHL- 484
++L + ++ + Y HRD+K N L+ + + DFGLAK+ R+ ++H
Sbjct: 107 VLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQH 166
Query: 485 -----TTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
+ GT Y + L + + + D+ S G V++ G
Sbjct: 167 IPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLG 211
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/206 (20%), Positives = 89/206 (43%), Gaps = 21/206 (10%)
Query: 321 IGRGGFGLVYKGILQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVPLRGCCVV 380
+GRG FG+V++ + + K ++ E+ I++ +HRN++ L
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESF-- 70
Query: 381 DGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLAYL 440
E E ++++++ ++ F N + L + + + V + L +L
Sbjct: 71 ----ESMEELVMIFEFISGLDI----FERINTSAF----ELNEREIVSYVHQVCEALQFL 118
Query: 441 HYGVKPAIYHRDIKATNILLDADMRA--RVADFGLAKQSREGQSHLTTRVAGTHGYLAPE 498
H I H DI+ NI+ + ++ +FG A+Q + G + A Y APE
Sbjct: 119 H---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPE--YYAPE 173
Query: 499 YALYGQLTEKSDVYSFGVVILEIMCG 524
+ ++ +D++S G ++ ++ G
Sbjct: 174 VHQHDVVSTATDMWSLGTLVYVLLSG 199
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 97/221 (43%), Gaps = 39/221 (17%)
Query: 321 IGRGGFGLVYKGILQD-------GTTVAVKKVIESDFQGDAE-FCNEVEIISNLKHRNLV 372
+G+G F ++KG+ ++ T + KV++ + +E F ++S L H++LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 373 PLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILD 432
G C G E LV +++ G++D +L + N + + K L+
Sbjct: 76 LNYGVCFC------GDENILVQEFVKFGSLDTYLKKNKNCINILWK------------LE 117
Query: 433 VAKGLAY-LHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREG-------QSHL 484
VAK LA+ +H+ + + H ++ A NILL + + + K S G + L
Sbjct: 118 VAKQLAWAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDIL 177
Query: 485 TTRVAGTHGYLAPE-YALYGQLTEKSDVYSFGVVILEIMCG 524
R+ ++ PE L +D +SFG + EI G
Sbjct: 178 QERIP----WVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 94/225 (41%), Gaps = 19/225 (8%)
Query: 305 IQDLERATDKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQGDAEFCNEVEII 363
+++ E ++ +G GGFG VY GI + D VA+K V + E N +
Sbjct: 1 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 60
Query: 364 SNLKHRNLVP--LRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
+ V G + ER L+ + P D LF F G + L
Sbjct: 61 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQD--LF-DFITERGALQEEL 116
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADM-RARVADFGLAKQSREG 480
++ V + + + H + HRDIK NIL+D + ++ DFG ++
Sbjct: 117 A----RSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 169
Query: 481 QSHLTTRVAGTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMCG 524
+ T GT Y PE+ Y + +S V+S G+++ +++CG
Sbjct: 170 ---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 94/225 (41%), Gaps = 19/225 (8%)
Query: 305 IQDLERATDKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQGDAEFCNEVEII 363
+++ E ++ +G GGFG VY GI + D VA+K V + E N +
Sbjct: 1 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 60
Query: 364 SNLKHRNLVP--LRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
+ V G + ER L+ + P D LF F G + L
Sbjct: 61 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQD--LF-DFITERGALQEEL 116
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADM-RARVADFGLAKQSREG 480
++ V + + + H + HRDIK NIL+D + ++ DFG ++
Sbjct: 117 A----RSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 169
Query: 481 QSHLTTRVAGTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMCG 524
+ T GT Y PE+ Y + +S V+S G+++ +++CG
Sbjct: 170 ---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 94/225 (41%), Gaps = 19/225 (8%)
Query: 305 IQDLERATDKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQGDAEFCNEVEII 363
+++ E ++ +G GGFG VY GI + D VA+K V + E N +
Sbjct: 1 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 60
Query: 364 SNLKHRNLVP--LRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
+ V G + ER L+ + P D LF F G + L
Sbjct: 61 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQD--LF-DFITERGALQEEL 116
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADM-RARVADFGLAKQSREG 480
++ V + + + H + HRDIK NIL+D + ++ DFG ++
Sbjct: 117 A----RSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 169
Query: 481 QSHLTTRVAGTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMCG 524
+ T GT Y PE+ Y + +S V+S G+++ +++CG
Sbjct: 170 ---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 93/224 (41%), Gaps = 19/224 (8%)
Query: 306 QDLERATDKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQGDAEFCNEVEIIS 364
++ E ++ +G GGFG VY GI + D VA+K V + E N +
Sbjct: 30 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 89
Query: 365 NLKHRNLVP--LRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLT 422
+ V G + ER L+ + P D LF F G + L
Sbjct: 90 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQD--LF-DFITERGALQEELA 145
Query: 423 WPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADM-RARVADFGLAKQSREGQ 481
++ V + + + H + HRDIK NIL+D + ++ DFG ++
Sbjct: 146 ----RSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT- 197
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMCG 524
+ T GT Y PE+ Y + +S V+S G+++ +++CG
Sbjct: 198 --VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 93/224 (41%), Gaps = 19/224 (8%)
Query: 306 QDLERATDKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQGDAEFCNEVEIIS 364
++ E ++ +G GGFG VY GI + D VA+K V + E N +
Sbjct: 30 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 89
Query: 365 NLKHRNLVP--LRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLT 422
+ V G + ER L+ + P D LF F G + L
Sbjct: 90 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQD--LF-DFITERGALQEELA 145
Query: 423 WPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADM-RARVADFGLAKQSREGQ 481
++ V + + + H + HRDIK NIL+D + ++ DFG ++
Sbjct: 146 ----RSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT- 197
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMCG 524
+ T GT Y PE+ Y + +S V+S G+++ +++CG
Sbjct: 198 --VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 93/224 (41%), Gaps = 19/224 (8%)
Query: 306 QDLERATDKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQGDAEFCNEVEIIS 364
++ E ++ +G GGFG VY GI + D VA+K V + E N +
Sbjct: 29 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 88
Query: 365 NLKHRNLVP--LRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLT 422
+ V G + ER L+ + P D LF F G + L
Sbjct: 89 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQD--LF-DFITERGALQEELA 144
Query: 423 WPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADM-RARVADFGLAKQSREGQ 481
++ V + + + H + HRDIK NIL+D + ++ DFG ++
Sbjct: 145 ----RSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT- 196
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMCG 524
+ T GT Y PE+ Y + +S V+S G+++ +++CG
Sbjct: 197 --VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 93/224 (41%), Gaps = 19/224 (8%)
Query: 306 QDLERATDKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQGDAEFCNEVEIIS 364
++ E ++ +G GGFG VY GI + D VA+K V + E N +
Sbjct: 30 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 89
Query: 365 NLKHRNLVP--LRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLT 422
+ V G + ER L+ + P D LF F G + L
Sbjct: 90 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQD--LF-DFITERGALQEELA 145
Query: 423 WPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADM-RARVADFGLAKQSREGQ 481
++ V + + + H + HRDIK NIL+D + ++ DFG ++
Sbjct: 146 ----RSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT- 197
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMCG 524
+ T GT Y PE+ Y + +S V+S G+++ +++CG
Sbjct: 198 --VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 93/224 (41%), Gaps = 19/224 (8%)
Query: 306 QDLERATDKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQGDAEFCNEVEIIS 364
++ E ++ +G GGFG VY GI + D VA+K V + E N +
Sbjct: 29 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 88
Query: 365 NLKHRNLVP--LRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLT 422
+ V G + ER L+ + P D LF F G + L
Sbjct: 89 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQD--LF-DFITERGALQEELA 144
Query: 423 WPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADM-RARVADFGLAKQSREGQ 481
++ V + + + H + HRDIK NIL+D + ++ DFG ++
Sbjct: 145 ----RSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT- 196
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMCG 524
+ T GT Y PE+ Y + +S V+S G+++ +++CG
Sbjct: 197 --VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 97/221 (43%), Gaps = 39/221 (17%)
Query: 321 IGRGGFGLVYKGILQD-------GTTVAVKKVIESDFQGDAE-FCNEVEIISNLKHRNLV 372
+G+G F ++KG+ ++ T + KV++ + +E F ++S L H++LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 373 PLRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILD 432
G CV G E LV +++ G++D +L + N + + K L+
Sbjct: 76 LNYGVCVC------GDENILVQEFVKFGSLDTYLKKNKNCINILWK------------LE 117
Query: 433 VAKGL-AYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREG-------QSHL 484
VAK L A +H+ + + H ++ A NILL + + + K S G + L
Sbjct: 118 VAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDIL 177
Query: 485 TTRVAGTHGYLAPE-YALYGQLTEKSDVYSFGVVILEIMCG 524
R+ ++ PE L +D +SFG + EI G
Sbjct: 178 QERIP----WVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 8/100 (8%)
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDA---DMRARVADFGLAKQSREGQSHL 484
I+ + + + YLH I HRD+K N+L + + ++ DFG AK++ S L
Sbjct: 126 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-L 181
Query: 485 TTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
TT T Y+APE + + D++S GV++ ++CG
Sbjct: 182 TTPCY-TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 220
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 8/100 (8%)
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDA---DMRARVADFGLAKQSREGQSHL 484
I+ + + + YLH I HRD+K N+L + + ++ DFG AK++ S L
Sbjct: 125 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-L 180
Query: 485 TTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
TT T Y+APE + + D++S GV++ ++CG
Sbjct: 181 TTPCY-TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 219
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 56/122 (45%), Gaps = 11/122 (9%)
Query: 406 LFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDA--- 462
LF D A T + I+ + + + YLH I HRD+K N+L +
Sbjct: 100 LFSRIQDRGDQA---FTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRP 153
Query: 463 DMRARVADFGLAKQSREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIM 522
+ ++ DFG AK++ S T T Y+APE + + D++S GV++ ++
Sbjct: 154 NAILKLTDFGFAKETTSHNS--LTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILL 211
Query: 523 CG 524
CG
Sbjct: 212 CG 213
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 93/224 (41%), Gaps = 19/224 (8%)
Query: 306 QDLERATDKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQGDAEFCNEVEIIS 364
++ E ++ +G GGFG VY GI + D VA+K V + E N +
Sbjct: 44 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 103
Query: 365 NLKHRNLVP--LRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLT 422
+ V G + ER L+ + P D LF F G + L
Sbjct: 104 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQD--LF-DFITERGALQEELA 159
Query: 423 WPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADM-RARVADFGLAKQSREGQ 481
++ V + + + H + HRDIK NIL+D + ++ DFG ++
Sbjct: 160 ----RSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT- 211
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMCG 524
+ T GT Y PE+ Y + +S V+S G+++ +++CG
Sbjct: 212 --VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 253
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 8/100 (8%)
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDA---DMRARVADFGLAKQSREGQSHL 484
I+ + + + YLH I HRD+K N+L + + ++ DFG AK++ S L
Sbjct: 127 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-L 182
Query: 485 TTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
TT T Y+APE + + D++S GV++ ++CG
Sbjct: 183 TTPCY-TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 221
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 93/224 (41%), Gaps = 19/224 (8%)
Query: 306 QDLERATDKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQGDAEFCNEVEIIS 364
++ E ++ +G GGFG VY GI + D VA+K V + E N +
Sbjct: 16 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 75
Query: 365 NLKHRNLVP--LRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLT 422
+ V G + ER L+ + P D LF F G + L
Sbjct: 76 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQD--LF-DFITERGALQEELA 131
Query: 423 WPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADM-RARVADFGLAKQSREGQ 481
++ V + + + H + HRDIK NIL+D + ++ DFG ++
Sbjct: 132 ----RSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT- 183
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMCG 524
+ T GT Y PE+ Y + +S V+S G+++ +++CG
Sbjct: 184 --VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 225
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 93/224 (41%), Gaps = 19/224 (8%)
Query: 306 QDLERATDKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQGDAEFCNEVEIIS 364
++ E ++ +G GGFG VY GI + D VA+K V + E N +
Sbjct: 29 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 88
Query: 365 NLKHRNLVP--LRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLT 422
+ V G + ER L+ + P D LF F G + L
Sbjct: 89 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQD--LF-DFITERGALQEELA 144
Query: 423 WPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADM-RARVADFGLAKQSREGQ 481
++ V + + + H + HRDIK NIL+D + ++ DFG ++
Sbjct: 145 ----RSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT- 196
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMCG 524
+ T GT Y PE+ Y + +S V+S G+++ +++CG
Sbjct: 197 --VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 94/225 (41%), Gaps = 19/225 (8%)
Query: 305 IQDLERATDKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQGDAEFCNEVEII 363
+++ E ++ +G GGFG VY GI + D VA+K V + E N +
Sbjct: 23 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 82
Query: 364 SNLKHRNLVP--LRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPL 421
+ V G + ER L+ + P D LF F G + L
Sbjct: 83 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQD--LF-DFITERGALQEEL 138
Query: 422 TWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADM-RARVADFGLAKQSREG 480
++ V + + + H + HRDIK NIL+D + ++ DFG ++
Sbjct: 139 A----RSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 191
Query: 481 QSHLTTRVAGTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMCG 524
+ T GT Y PE+ Y + +S V+S G+++ +++CG
Sbjct: 192 ---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 233
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 93/224 (41%), Gaps = 19/224 (8%)
Query: 306 QDLERATDKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQGDAEFCNEVEIIS 364
++ E ++ +G GGFG VY GI + D VA+K V + E N +
Sbjct: 30 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 89
Query: 365 NLKHRNLVP--LRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLT 422
+ V G + ER L+ + P D LF F G + L
Sbjct: 90 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQD--LF-DFITERGALQEELA 145
Query: 423 WPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADM-RARVADFGLAKQSREGQ 481
++ V + + + H + HRDIK NIL+D + ++ DFG ++
Sbjct: 146 ----RSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT- 197
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMCG 524
+ T GT Y PE+ Y + +S V+S G+++ +++CG
Sbjct: 198 --VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 88/210 (41%), Gaps = 19/210 (9%)
Query: 320 FIGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQGDAEFCNEVEIISNLKHRNLVP--LRG 376
+G GGFG VY GI + D VA+K V + E N + + V G
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 377 CCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLTWPQRKNIILDVAKG 436
+ ER L+ + P D LF F G + L ++ V +
Sbjct: 71 VIRLLDWFERPDSFVLILE-RPEPVQD--LF-DFITERGALQEELA----RSFFWQVLEA 122
Query: 437 LAYLHYGVKPAIYHRDIKATNILLDADM-RARVADFGLAKQSREGQSHLTTRVAGTHGYL 495
+ + H + HRDIK NIL+D + ++ DFG ++ + T GT Y
Sbjct: 123 VRHCH---NXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYS 176
Query: 496 APEYALYGQLTEKS-DVYSFGVVILEIMCG 524
PE+ Y + +S V+S G+++ +++CG
Sbjct: 177 PPEWIRYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 8/100 (8%)
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDA---DMRARVADFGLAKQSREGQSHL 484
I+ + + + YLH I HRD+K N+L + + ++ DFG AK++ S L
Sbjct: 120 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-L 175
Query: 485 TTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
TT T Y+APE + + D++S GV++ ++CG
Sbjct: 176 TTPCY-TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 214
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 93/224 (41%), Gaps = 19/224 (8%)
Query: 306 QDLERATDKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQGDAEFCNEVEIIS 364
++ E ++ +G GGFG VY GI + D VA+K V + E N +
Sbjct: 29 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 88
Query: 365 NLKHRNLVP--LRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLT 422
+ V G + ER L+ + P D LF F G + L
Sbjct: 89 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQD--LF-DFITERGALQEELA 144
Query: 423 WPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADM-RARVADFGLAKQSREGQ 481
++ V + + + H + HRDIK NIL+D + ++ DFG ++
Sbjct: 145 ----RSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT- 196
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMCG 524
+ T GT Y PE+ Y + +S V+S G+++ +++CG
Sbjct: 197 --VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 93/224 (41%), Gaps = 19/224 (8%)
Query: 306 QDLERATDKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQGDAEFCNEVEIIS 364
++ E ++ +G GGFG VY GI + D VA+K V + E N +
Sbjct: 49 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 108
Query: 365 NLKHRNLVP--LRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLT 422
+ V G + ER L+ + P D LF F G + L
Sbjct: 109 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQD--LF-DFITERGALQEELA 164
Query: 423 WPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADM-RARVADFGLAKQSREGQ 481
++ V + + + H + HRDIK NIL+D + ++ DFG ++
Sbjct: 165 ----RSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT- 216
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMCG 524
+ T GT Y PE+ Y + +S V+S G+++ +++CG
Sbjct: 217 --VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 258
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 8/100 (8%)
Query: 428 NIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDA---DMRARVADFGLAKQSREGQSHL 484
I+ + + + YLH I HRD+K N+L + + ++ DFG AK++ S L
Sbjct: 119 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-L 174
Query: 485 TTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCG 524
TT T Y+APE + + D++S GV++ ++CG
Sbjct: 175 TTPCY-TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 213
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 93/224 (41%), Gaps = 19/224 (8%)
Query: 306 QDLERATDKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQGDAEFCNEVEIIS 364
++ E ++ +G GGFG VY GI + D VA+K V + E N +
Sbjct: 16 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 75
Query: 365 NLKHRNLVP--LRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLT 422
+ V G + ER L+ + P D LF F G + L
Sbjct: 76 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQD--LF-DFITERGALQEELA 131
Query: 423 WPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADM-RARVADFGLAKQSREGQ 481
++ V + + + H + HRDIK NIL+D + ++ DFG ++
Sbjct: 132 ----RSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT- 183
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMCG 524
+ T GT Y PE+ Y + +S V+S G+++ +++CG
Sbjct: 184 --VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 225
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 11/122 (9%)
Query: 406 LFPSFNDGSGVAKRPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDA--- 462
LF D A T + I+ + + + YLH I HRD+K N+L +
Sbjct: 102 LFSRIQDRGDQA---FTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRP 155
Query: 463 DMRARVADFGLAKQSREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIM 522
+ ++ DFG AK++ S LTT T Y+APE + + D++S GV++ ++
Sbjct: 156 NAILKLTDFGFAKETTSHNS-LTTPCY-TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILL 213
Query: 523 CG 524
CG
Sbjct: 214 CG 215
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 93/224 (41%), Gaps = 19/224 (8%)
Query: 306 QDLERATDKFSQKNFIGRGGFGLVYKGI-LQDGTTVAVKKVIESDFQGDAEFCNEVEIIS 364
++ E ++ +G GGFG VY GI + D VA+K V + E N +
Sbjct: 17 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 76
Query: 365 NLKHRNLVP--LRGCCVVDGDNERGSERYLVYDYMPNGNVDDHLFPSFNDGSGVAKRPLT 422
+ V G + ER L+ + P D LF F G + L
Sbjct: 77 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQD--LF-DFITERGALQEELA 132
Query: 423 WPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADM-RARVADFGLAKQSREGQ 481
++ V + + + H + HRDIK NIL+D + ++ DFG ++
Sbjct: 133 ----RSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT- 184
Query: 482 SHLTTRVAGTHGYLAPEYALYGQLTEKS-DVYSFGVVILEIMCG 524
+ T GT Y PE+ Y + +S V+S G+++ +++CG
Sbjct: 185 --VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.137 0.426
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,487,627
Number of Sequences: 62578
Number of extensions: 820734
Number of successful extensions: 4047
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 853
Number of HSP's successfully gapped in prelim test: 235
Number of HSP's that attempted gapping in prelim test: 1744
Number of HSP's gapped (non-prelim): 1182
length of query: 683
length of database: 14,973,337
effective HSP length: 105
effective length of query: 578
effective length of database: 8,402,647
effective search space: 4856729966
effective search space used: 4856729966
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)