Query 005693
Match_columns 682
No_of_seqs 576 out of 5071
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 04:47:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005693.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005693hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4aoj_A High affinity nerve gro 100.0 5E-51 1.7E-55 428.9 22.0 252 390-662 46-321 (329)
2 3omv_A RAF proto-oncogene seri 100.0 6.9E-51 2.4E-55 422.2 20.4 252 389-663 40-303 (307)
3 4gt4_A Tyrosine-protein kinase 100.0 7.2E-51 2.5E-55 423.7 20.3 248 390-658 31-304 (308)
4 4asz_A BDNF/NT-3 growth factor 100.0 2.1E-51 7.3E-56 425.8 15.2 252 390-662 18-291 (299)
5 3hmm_A TGF-beta receptor type- 100.0 1.4E-50 4.8E-55 422.1 15.4 261 390-662 8-299 (303)
6 4fih_A Serine/threonine-protei 100.0 1.5E-49 5.3E-54 417.3 19.5 240 390-654 79-324 (346)
7 4g3f_A NF-kappa-beta-inducing 100.0 1.9E-49 6.7E-54 415.3 19.2 245 390-662 63-318 (336)
8 4ase_A Vascular endothelial gr 100.0 2.5E-49 8.7E-54 419.3 18.8 257 389-664 68-351 (353)
9 3fpq_A Serine/threonine-protei 100.0 4.8E-49 1.7E-53 405.4 19.5 241 391-654 32-283 (290)
10 4b9d_A Serine/threonine-protei 100.0 7.4E-49 2.5E-53 412.7 18.2 241 390-654 29-277 (350)
11 4fie_A Serine/threonine-protei 100.0 2.5E-48 8.7E-53 418.0 19.7 240 390-654 156-401 (423)
12 4aw0_A HPDK1, 3-phosphoinositi 100.0 2.3E-48 8E-53 402.4 15.2 238 390-654 37-285 (311)
13 3hyh_A Carbon catabolite-derep 100.0 1.6E-47 5.3E-52 390.8 19.2 237 390-654 18-263 (275)
14 3ubd_A Ribosomal protein S6 ki 100.0 8.8E-48 3E-52 398.0 13.0 237 390-653 29-281 (304)
15 4g31_A Eukaryotic translation 100.0 4.8E-46 1.6E-50 386.2 17.4 240 390-654 10-280 (299)
16 4f9c_A Cell division cycle 7-r 100.0 8.7E-44 3E-48 379.1 21.8 188 390-589 26-251 (361)
17 4b99_A Mitogen-activated prote 100.0 4E-43 1.4E-47 378.1 24.8 249 390-654 59-345 (398)
18 2qkw_B Protein kinase; three-h 100.0 5.7E-42 2E-46 360.8 24.1 267 390-662 44-317 (321)
19 3v5w_A G-protein coupled recep 100.0 2E-42 6.7E-47 388.4 19.7 242 390-654 194-450 (689)
20 3uto_A Twitchin; kinase, muscl 100.0 4E-42 1.4E-46 388.0 20.5 243 390-654 162-411 (573)
21 3soc_A Activin receptor type-2 100.0 4.3E-42 1.5E-46 362.0 17.3 257 390-662 29-320 (322)
22 3uim_A Brassinosteroid insensi 100.0 7.9E-42 2.7E-46 360.4 17.9 278 379-659 19-310 (326)
23 3p86_A Serine/threonine-protei 100.0 5.1E-41 1.8E-45 351.7 19.1 253 390-663 42-301 (309)
24 3s95_A LIMK-1, LIM domain kina 100.0 1.3E-40 4.5E-45 348.5 21.2 248 390-663 15-285 (310)
25 4hcu_A Tyrosine-protein kinase 100.0 2.2E-40 7.4E-45 339.5 21.6 247 390-661 15-267 (269)
26 2psq_A Fibroblast growth facto 100.0 9.7E-41 3.3E-45 358.5 18.6 254 390-663 86-367 (370)
27 3fxz_A Serine/threonine-protei 100.0 2.1E-40 7E-45 345.1 20.1 240 390-654 25-270 (297)
28 3sxs_A Cytoplasmic tyrosine-pr 100.0 2.8E-40 9.6E-45 338.3 20.2 248 390-662 13-266 (268)
29 3kul_A Ephrin type-A receptor 100.0 2.4E-40 8.3E-45 349.1 19.9 252 390-666 54-319 (325)
30 3gen_A Tyrosine-protein kinase 100.0 4.9E-40 1.7E-44 339.4 21.1 248 390-662 29-282 (283)
31 2izr_A Casein kinase I isoform 100.0 9.1E-40 3.1E-44 345.4 23.3 253 390-662 14-283 (330)
32 2nru_A Interleukin-1 receptor- 100.0 2.8E-39 9.6E-44 337.8 25.9 271 378-660 13-306 (307)
33 3q4u_A Activin receptor type-1 100.0 3.4E-40 1.2E-44 343.5 18.5 251 390-658 13-300 (301)
34 2c30_A Serine/threonine-protei 100.0 1.3E-39 4.5E-44 342.9 22.7 239 391-654 51-295 (321)
35 3tt0_A Basic fibroblast growth 100.0 1.3E-39 4.6E-44 351.3 23.0 260 390-669 74-361 (382)
36 1qcf_A Haematopoetic cell kina 100.0 5.5E-40 1.9E-44 362.5 19.2 248 390-662 193-446 (454)
37 3fe3_A MAP/microtubule affinit 100.0 9.4E-40 3.2E-44 344.8 20.1 238 390-654 20-265 (328)
38 1csn_A Casein kinase-1; phosph 100.0 2.7E-39 9.1E-44 336.2 23.2 255 390-663 15-286 (298)
39 3mdy_A Bone morphogenetic prot 100.0 2.2E-39 7.6E-44 342.9 21.8 259 390-663 42-334 (337)
40 4eqm_A Protein kinase; transfe 100.0 3.9E-39 1.3E-43 334.9 23.1 255 390-666 16-281 (294)
41 1k9a_A Carboxyl-terminal SRC k 100.0 2.2E-39 7.5E-44 357.1 21.6 247 390-662 198-447 (450)
42 3dtc_A Mitogen-activated prote 100.0 1E-39 3.5E-44 334.6 17.3 245 390-658 12-271 (271)
43 2yab_A Death-associated protei 100.0 4.7E-39 1.6E-43 343.7 22.8 241 390-653 17-272 (361)
44 3cbl_A C-FES, proto-oncogene t 100.0 4.6E-40 1.6E-44 354.3 14.8 247 390-661 119-375 (377)
45 1o6l_A RAC-beta serine/threoni 100.0 1.1E-38 3.6E-43 337.9 25.0 238 390-654 10-261 (337)
46 4dc2_A Protein kinase C IOTA t 100.0 6.4E-39 2.2E-43 346.1 23.7 245 390-653 57-318 (396)
47 1tki_A Titin; serine kinase, m 100.0 2.2E-39 7.4E-44 341.2 19.5 244 390-655 10-259 (321)
48 3zgw_A Maternal embryonic leuc 100.0 3.1E-39 1.1E-43 343.1 20.8 240 390-656 15-263 (347)
49 3t9t_A Tyrosine-protein kinase 100.0 3.1E-39 1.1E-43 330.1 20.1 247 390-661 13-265 (267)
50 3niz_A Rhodanese family protei 100.0 2.2E-39 7.4E-44 339.7 19.1 253 390-654 26-301 (311)
51 2qol_A Ephrin receptor; recept 100.0 1.3E-39 4.5E-44 350.1 17.8 248 390-662 50-311 (373)
52 3poz_A Epidermal growth factor 100.0 4.9E-40 1.7E-44 347.1 14.1 246 390-661 20-279 (327)
53 1opk_A P150, C-ABL, proto-onco 100.0 1.4E-39 4.9E-44 362.8 18.6 248 390-661 225-479 (495)
54 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 1.8E-39 6.3E-44 358.0 19.3 249 390-663 189-443 (452)
55 3ugc_A Tyrosine-protein kinase 100.0 1.2E-39 4.2E-44 338.6 16.4 255 390-662 15-293 (295)
56 3kn6_A Ribosomal protein S6 ki 100.0 1.9E-39 6.7E-44 342.2 18.1 247 390-654 16-271 (325)
57 3vhe_A Vascular endothelial gr 100.0 7.1E-40 2.4E-44 350.1 14.8 254 390-662 27-357 (359)
58 3kex_A Receptor tyrosine-prote 100.0 5.7E-40 2E-44 346.2 13.6 246 390-661 18-277 (325)
59 4euu_A Serine/threonine-protei 100.0 2E-38 6.8E-43 333.5 25.2 263 390-660 14-309 (319)
60 3txo_A PKC-L, NPKC-ETA, protei 100.0 1.9E-39 6.5E-44 345.8 17.6 238 390-653 28-280 (353)
61 3tki_A Serine/threonine-protei 100.0 1.9E-39 6.6E-44 341.9 17.3 241 390-654 12-262 (323)
62 3lb7_A RAF proto-oncogene seri 100.0 1.2E-38 4.2E-43 333.3 22.6 251 390-663 41-303 (307)
63 1nxk_A MAP kinase-activated pr 100.0 1.1E-38 3.8E-43 346.0 22.7 246 391-656 68-324 (400)
64 3l9p_A Anaplastic lymphoma kin 100.0 1.8E-39 6.2E-44 348.3 15.8 252 390-662 76-347 (367)
65 3a8x_A Protein kinase C IOTA t 100.0 1.3E-38 4.4E-43 338.5 21.8 246 390-654 14-276 (345)
66 1luf_A Muscle-specific tyrosin 100.0 3.5E-39 1.2E-43 342.3 17.2 253 390-663 52-338 (343)
67 2y0a_A Death-associated protei 100.0 2.3E-38 8E-43 334.1 23.4 242 390-654 16-272 (326)
68 3h4j_B AMPK kdaid, SNF1-like p 100.0 8.9E-39 3E-43 338.2 20.1 238 390-655 14-260 (336)
69 3op5_A Serine/threonine-protei 100.0 7.3E-39 2.5E-43 343.3 19.7 256 390-663 40-332 (364)
70 1rjb_A FL cytokine receptor; k 100.0 3.9E-39 1.3E-43 342.4 17.4 257 390-665 50-339 (344)
71 1fot_A TPK1 delta, CAMP-depend 100.0 1.1E-38 3.7E-43 335.3 20.4 238 390-654 11-259 (318)
72 3uc3_A Serine/threonine-protei 100.0 1E-38 3.5E-43 341.6 20.6 245 390-655 25-276 (361)
73 2eva_A TAK1 kinase - TAB1 chim 100.0 1.6E-38 5.4E-43 332.4 21.6 253 390-664 13-267 (307)
74 3soa_A Calcium/calmodulin-depe 100.0 2.1E-38 7.3E-43 347.6 23.5 242 390-654 16-268 (444)
75 3c0i_A Peripheral plasma membr 100.0 9.7E-39 3.3E-43 340.6 20.1 244 390-653 29-286 (351)
76 1t46_A HOMO sapiens V-KIT hard 100.0 5.2E-39 1.8E-43 336.4 17.6 255 390-663 28-310 (313)
77 2bdw_A Hypothetical protein K1 100.0 2.1E-38 7.3E-43 339.2 22.6 242 390-654 34-285 (362)
78 2zv2_A Calcium/calmodulin-depe 100.0 6.9E-39 2.4E-43 333.5 18.1 239 390-654 18-293 (298)
79 1xjd_A Protein kinase C, theta 100.0 5.4E-39 1.9E-43 341.1 17.4 238 390-653 22-269 (345)
80 1qpc_A LCK kinase; alpha beta 100.0 1.2E-38 4.1E-43 328.3 19.4 250 390-664 18-273 (279)
81 3qd2_B Eukaryotic translation 100.0 6.6E-39 2.2E-43 338.2 17.8 240 390-654 11-326 (332)
82 3llt_A Serine/threonine kinase 100.0 2.8E-39 9.4E-44 345.8 15.0 193 390-589 40-263 (360)
83 3uzp_A CKI-delta, CKID, casein 100.0 8.7E-38 3E-42 324.4 25.9 255 390-664 14-284 (296)
84 3v8s_A RHO-associated protein 100.0 9.2E-39 3.1E-43 346.7 19.1 241 390-654 74-330 (410)
85 2h8h_A Proto-oncogene tyrosine 100.0 7.6E-39 2.6E-43 360.2 18.9 248 390-662 272-525 (535)
86 4f0f_A Serine/threonine-protei 100.0 1.5E-38 5.2E-43 328.8 19.7 247 390-658 24-287 (287)
87 4fvq_A Tyrosine-protein kinase 100.0 5.3E-39 1.8E-43 332.5 16.2 248 390-663 13-278 (289)
88 3g2f_A Bone morphogenetic prot 100.0 1.1E-38 3.9E-43 337.6 19.0 265 390-669 18-327 (336)
89 2pvf_A Fibroblast growth facto 100.0 2.3E-38 7.9E-43 335.2 21.2 256 390-665 40-323 (334)
90 2ivs_A Proto-oncogene tyrosine 100.0 4E-39 1.4E-43 337.5 15.0 251 390-661 28-312 (314)
91 4hgt_A Casein kinase I isoform 100.0 6.6E-38 2.3E-42 325.1 24.1 255 390-663 14-283 (296)
92 3kmu_A ILK, integrin-linked ki 100.0 2E-38 6.7E-43 324.6 19.7 248 390-660 15-270 (271)
93 3qup_A Tyrosine-protein kinase 100.0 5.7E-39 1.9E-43 338.0 16.1 255 390-665 28-303 (323)
94 1ob3_A PFPK5, cell division co 100.0 3.8E-39 1.3E-43 333.8 14.5 253 390-654 7-281 (288)
95 2i0e_A Protein kinase C-beta I 100.0 1.6E-38 5.3E-43 338.6 19.4 239 390-654 25-277 (353)
96 1mp8_A Focal adhesion kinase 1 100.0 8.5E-39 2.9E-43 329.9 16.7 246 390-661 20-277 (281)
97 3gxj_A TGF-beta receptor type- 100.0 1.3E-40 4.5E-45 346.7 2.8 255 390-662 8-299 (303)
98 4fr4_A YANK1, serine/threonine 100.0 2.1E-38 7.2E-43 340.9 20.0 240 390-653 20-271 (384)
99 1mqb_A Ephrin type-A receptor 100.0 2.5E-38 8.5E-43 334.9 20.1 249 390-663 49-312 (333)
100 3kfa_A Tyrosine-protein kinase 100.0 4.4E-39 1.5E-43 332.9 14.0 249 390-662 18-273 (288)
101 1b6c_B TGF-B superfamily recep 100.0 2.7E-38 9.1E-43 335.4 20.3 256 390-663 47-339 (342)
102 2ac3_A MAP kinase-interacting 100.0 3.3E-38 1.1E-42 331.0 20.7 249 391-654 19-296 (316)
103 3p1a_A MYT1 kinase, membrane-a 100.0 2.1E-38 7.1E-43 332.2 19.1 237 390-654 62-305 (311)
104 1u59_A Tyrosine-protein kinase 100.0 3.2E-38 1.1E-42 326.6 20.2 248 391-664 16-276 (287)
105 3lxp_A Non-receptor tyrosine-p 100.0 5.1E-39 1.7E-43 337.9 14.4 256 390-665 36-315 (318)
106 2ozo_A Tyrosine-protein kinase 100.0 3E-38 1E-42 360.5 21.8 247 392-664 343-602 (613)
107 4e5w_A Tyrosine-protein kinase 100.0 1.2E-38 4.1E-43 332.1 16.8 252 390-659 26-301 (302)
108 2v62_A Serine/threonine-protei 100.0 1.1E-38 3.6E-43 339.4 16.5 256 390-662 42-330 (345)
109 2x4f_A Myosin light chain kina 100.0 2E-38 6.9E-43 340.7 18.8 242 390-653 94-342 (373)
110 3pls_A Macrophage-stimulating 100.0 3.2E-38 1.1E-42 328.0 19.7 251 390-665 26-292 (298)
111 3c1x_A Hepatocyte growth facto 100.0 9.7E-39 3.3E-43 343.1 16.3 252 390-666 94-361 (373)
112 1u5q_A Serine/threonine protei 100.0 5.5E-38 1.9E-42 334.2 21.9 242 390-656 59-308 (348)
113 3gni_B Strad alpha; kinase fol 100.0 7.3E-38 2.5E-42 338.6 23.0 261 390-659 30-341 (389)
114 1rdq_E PKA C-alpha, CAMP-depen 100.0 2.5E-38 8.6E-43 336.9 18.8 238 390-654 46-294 (350)
115 3a62_A Ribosomal protein S6 ki 100.0 3.8E-38 1.3E-42 332.6 20.0 238 390-654 22-277 (327)
116 2qr7_A Ribosomal protein S6 ki 100.0 1.2E-38 4.1E-43 338.4 16.2 244 390-655 27-279 (342)
117 1fvr_A Tyrosine-protein kinase 100.0 6.2E-38 2.1E-42 330.8 21.4 255 390-664 30-304 (327)
118 3g33_A Cell division protein k 100.0 2.6E-38 9E-43 330.7 18.2 256 390-654 14-297 (308)
119 2w4o_A Calcium/calmodulin-depe 100.0 4.4E-38 1.5E-42 335.2 20.1 242 390-654 58-306 (349)
120 4aw2_A Serine/threonine-protei 100.0 5.7E-38 1.9E-42 343.1 21.3 244 390-654 79-339 (437)
121 3e7e_A HBUB1, BUB1A, mitotic c 100.0 5.5E-38 1.9E-42 336.6 20.6 248 390-664 70-343 (365)
122 3og7_A AKAP9-BRAF fusion prote 100.0 4.1E-38 1.4E-42 326.2 18.8 248 390-660 29-288 (289)
123 2xir_A Vascular endothelial gr 100.0 2.9E-38 1E-42 331.1 17.8 255 390-663 32-313 (316)
124 3f66_A Hepatocyte growth facto 100.0 3.5E-38 1.2E-42 328.0 18.2 250 390-664 30-295 (298)
125 3oz6_A Mitogen-activated prote 100.0 1.5E-38 5.1E-43 343.9 15.8 190 390-589 14-235 (388)
126 3o0g_A Cell division protein k 100.0 7.9E-38 2.7E-42 324.5 20.6 251 390-654 7-283 (292)
127 4eut_A Serine/threonine-protei 100.0 7.2E-38 2.5E-42 339.4 21.1 265 390-662 14-311 (396)
128 3mtl_A Cell division protein k 100.0 1.2E-38 4.2E-43 335.9 14.6 279 390-680 7-310 (324)
129 2zmd_A Dual specificity protei 100.0 1.4E-37 4.7E-42 336.4 23.1 241 390-655 61-322 (390)
130 1kob_A Twitchin; kinase, intra 100.0 5.6E-38 1.9E-42 338.5 19.7 243 390-654 56-305 (387)
131 2a19_B Interferon-induced, dou 100.0 2.9E-38 9.9E-43 325.8 16.7 244 390-665 16-279 (284)
132 3lzb_A Epidermal growth factor 100.0 1.8E-38 6.3E-43 335.0 15.5 246 390-661 20-279 (327)
133 2acx_A G protein-coupled recep 100.0 7.2E-38 2.5E-42 350.7 21.1 244 390-654 189-445 (576)
134 4agu_A Cyclin-dependent kinase 100.0 2.7E-38 9.2E-43 330.9 16.5 256 390-654 8-285 (311)
135 3ork_A Serine/threonine protei 100.0 4.4E-38 1.5E-42 329.6 18.1 253 390-665 17-286 (311)
136 4fl3_A Tyrosine-protein kinase 100.0 4.2E-38 1.4E-42 360.3 19.5 244 391-661 375-632 (635)
137 3lxl_A Tyrosine-protein kinase 100.0 9.4E-39 3.2E-43 337.1 13.1 258 390-665 28-308 (327)
138 3ll6_A Cyclin G-associated kin 100.0 3.1E-38 1.1E-42 333.8 16.9 252 390-665 33-313 (337)
139 3fdn_A Serine/threonine-protei 100.0 1.2E-37 4E-42 320.9 20.7 239 390-655 14-259 (279)
140 2a2a_A Death-associated protei 100.0 2.3E-37 8E-42 325.6 23.3 242 390-654 17-273 (321)
141 3lm5_A Serine/threonine-protei 100.0 1.2E-37 4.2E-42 328.7 21.2 245 390-654 34-288 (327)
142 3cc6_A Protein tyrosine kinase 100.0 2.9E-38 9.7E-43 325.9 16.0 247 390-662 17-275 (281)
143 3brb_A Proto-oncogene tyrosine 100.0 6.6E-38 2.2E-42 328.4 18.9 253 390-663 39-311 (313)
144 3dbq_A Dual specificity protei 100.0 1.4E-37 4.7E-42 330.6 21.6 242 390-656 14-276 (343)
145 2vd5_A DMPK protein; serine/th 100.0 2.7E-38 9.3E-43 343.2 16.3 243 390-654 66-328 (412)
146 2pmi_A Negative RE, cyclin-dep 100.0 1.7E-38 6E-43 333.7 14.2 257 390-654 10-294 (317)
147 3cok_A Serine/threonine-protei 100.0 8.3E-38 2.8E-42 321.8 18.9 239 390-654 16-263 (278)
148 3sv0_A Casein kinase I-like; t 100.0 1.8E-37 6.2E-42 343.2 22.7 254 390-662 12-280 (483)
149 2y94_A 5'-AMP-activated protei 100.0 8E-38 2.7E-42 345.4 19.5 238 390-654 21-267 (476)
150 2wqm_A Serine/threonine-protei 100.0 1.3E-37 4.4E-42 325.7 19.8 256 390-664 37-301 (310)
151 1xbb_A Tyrosine-protein kinase 100.0 1.4E-37 4.8E-42 322.5 19.9 245 391-662 23-281 (291)
152 2h34_A Serine/threonine-protei 100.0 5.9E-38 2E-42 328.4 17.0 252 390-665 39-301 (309)
153 3bhy_A Death-associated protei 100.0 4.7E-37 1.6E-41 316.9 23.4 251 390-663 10-277 (283)
154 3kk8_A Calcium/calmodulin depe 100.0 2.8E-37 9.7E-42 318.7 21.7 242 390-654 11-262 (284)
155 2i1m_A Macrophage colony-stimu 100.0 7.8E-39 2.7E-43 338.5 10.2 254 390-662 51-328 (333)
156 3is5_A Calcium-dependent prote 100.0 6.2E-38 2.1E-42 324.3 16.7 244 390-654 27-279 (285)
157 2jii_A Serine/threonine-protei 100.0 1.5E-37 5.1E-42 331.5 20.1 256 390-664 47-340 (352)
158 2yex_A Serine/threonine-protei 100.0 2.1E-37 7.2E-42 318.1 20.1 241 390-654 12-262 (276)
159 3f3z_A Calcium/calmodulin-depe 100.0 3.4E-37 1.2E-41 317.0 21.5 241 390-654 14-262 (277)
160 3q60_A ROP5B; pseudokinase, tr 100.0 1.4E-38 4.8E-43 342.0 11.6 247 390-653 67-352 (371)
161 1wak_A Serine/threonine-protei 100.0 1.9E-37 6.4E-42 335.6 20.5 258 390-654 42-392 (397)
162 3dls_A PAS domain-containing s 100.0 1.2E-37 4E-42 330.0 18.3 232 390-654 29-275 (335)
163 2r5t_A Serine/threonine-protei 100.0 5.2E-38 1.8E-42 337.0 15.7 234 390-649 43-285 (373)
164 3c4z_A Rhodopsin kinase; Ser/T 100.0 2.1E-37 7.1E-42 346.1 21.1 244 391-653 191-448 (543)
165 1byg_A CSK, protein (C-termina 100.0 5.3E-38 1.8E-42 323.3 15.0 247 390-662 26-275 (278)
166 3kvw_A DYRK2, dual specificity 100.0 7E-38 2.4E-42 342.9 16.7 193 390-589 102-303 (429)
167 4ejn_A RAC-alpha serine/threon 100.0 7.2E-38 2.5E-42 344.9 16.8 237 390-653 153-404 (446)
168 2buj_A Serine/threonine-protei 100.0 6.5E-38 2.2E-42 328.9 15.6 255 390-664 34-310 (317)
169 1x8b_A WEE1HU, WEE1-like prote 100.0 1E-37 3.4E-42 322.1 16.8 241 390-654 16-280 (289)
170 1p4o_A Insulin-like growth fac 100.0 5.3E-38 1.8E-42 330.4 14.6 251 390-661 30-300 (322)
171 2vgo_A Serine/threonine-protei 100.0 4.7E-37 1.6E-41 317.3 21.3 238 390-654 19-263 (284)
172 1vzo_A Ribosomal protein S6 ki 100.0 1.1E-37 3.6E-42 333.1 16.9 244 390-655 59-323 (355)
173 2eue_A Carbon catabolite derep 100.0 1.6E-37 5.5E-42 319.2 17.6 237 390-654 18-263 (275)
174 3nsz_A CK II alpha, casein kin 100.0 3.7E-37 1.3E-41 325.1 20.4 250 390-654 41-320 (330)
175 3hko_A Calcium/calmodulin-depe 100.0 2E-37 7E-42 329.2 18.4 247 390-654 31-331 (345)
176 2y7j_A Phosphorylase B kinase 100.0 7.9E-37 2.7E-41 327.5 23.0 243 390-654 99-360 (365)
177 3i6u_A CDS1, serine/threonine- 100.0 4.2E-37 1.4E-41 335.7 21.2 242 390-654 140-400 (419)
178 3ttj_A Mitogen-activated prote 100.0 2.1E-37 7.1E-42 342.2 19.0 251 390-654 67-356 (464)
179 3byv_A Rhoptry kinase; malaria 100.0 4.9E-39 1.7E-43 346.3 5.5 243 390-659 78-367 (377)
180 1z57_A Dual specificity protei 100.0 1.8E-37 6.3E-42 327.9 17.3 254 390-654 19-329 (339)
181 4aaa_A Cyclin-dependent kinase 100.0 4E-37 1.4E-41 325.3 19.5 256 390-654 30-307 (331)
182 1t4h_A Serine/threonine-protei 100.0 4E-37 1.4E-41 318.8 19.1 242 390-654 31-283 (290)
183 2jam_A Calcium/calmodulin-depe 100.0 7.4E-37 2.5E-41 319.1 21.1 242 390-654 14-262 (304)
184 3rgf_A Cyclin-dependent kinase 100.0 3.5E-37 1.2E-41 335.1 19.3 202 383-590 19-241 (405)
185 1cm8_A Phosphorylated MAP kina 100.0 1E-37 3.5E-42 334.6 14.7 251 390-659 30-315 (367)
186 2w1i_A JAK2; chromosomal rearr 100.0 1.6E-37 5.4E-42 327.6 15.8 254 390-661 46-323 (326)
187 1q8y_A SR protein kinase; tran 100.0 8.3E-37 2.8E-41 327.9 21.5 258 390-654 24-334 (373)
188 3mi9_A Cell division protein k 100.0 2.4E-37 8.1E-42 329.7 16.9 253 390-654 22-312 (351)
189 3pfq_A PKC-B, PKC-beta, protei 100.0 2.9E-37 9.8E-42 355.7 18.6 238 390-653 346-597 (674)
190 3mwu_A Calmodulin-domain prote 100.0 1.1E-36 3.7E-41 339.2 22.5 241 390-654 27-277 (486)
191 2x7f_A TRAF2 and NCK-interacti 100.0 4.4E-37 1.5E-41 323.9 18.3 243 390-654 29-287 (326)
192 3rp9_A Mitogen-activated prote 100.0 4.2E-37 1.4E-41 340.0 18.8 181 390-580 58-279 (458)
193 3eqc_A Dual specificity mitoge 100.0 3.1E-37 1.1E-41 329.9 16.9 191 390-589 38-234 (360)
194 3q5i_A Protein kinase; CDPK, m 100.0 1.2E-36 4.1E-41 340.3 22.1 241 390-654 41-302 (504)
195 1u46_A ACK-1, activated CDC42 100.0 1.3E-37 4.4E-42 322.3 13.2 250 390-664 23-288 (291)
196 2rku_A Serine/threonine-protei 100.0 1.2E-36 4.2E-41 315.8 20.3 239 390-655 20-267 (294)
197 3com_A Serine/threonine-protei 100.0 8.5E-37 2.9E-41 320.0 19.2 240 390-653 34-278 (314)
198 2clq_A Mitogen-activated prote 100.0 5.6E-37 1.9E-41 318.1 17.6 243 391-654 28-279 (295)
199 3a7i_A MST3 kinase, serine/thr 100.0 1.4E-36 4.7E-41 316.8 20.5 240 390-656 27-273 (303)
200 2yfx_A Tyrosine-protein kinase 100.0 3.1E-37 1.1E-41 325.5 15.6 252 390-662 35-306 (327)
201 3nyv_A Calmodulin-domain prote 100.0 4.4E-37 1.5E-41 342.2 17.6 241 390-654 31-282 (484)
202 3lij_A Calcium/calmodulin depe 100.0 1.3E-36 4.5E-41 339.2 21.4 245 390-658 42-298 (494)
203 2ycf_A Serine/threonine-protei 100.0 1.8E-36 6.2E-41 318.9 21.3 241 390-653 15-274 (322)
204 1ua2_A CAK, cell division prot 100.0 2.8E-37 9.5E-42 328.6 15.2 255 390-655 15-293 (346)
205 2owb_A Serine/threonine-protei 100.0 1.3E-36 4.3E-41 322.1 19.8 238 390-654 46-292 (335)
206 2vx3_A Dual specificity tyrosi 100.0 8.7E-37 3E-41 329.3 18.9 195 390-589 59-262 (382)
207 2h6d_A 5'-AMP-activated protei 100.0 1.5E-36 5.1E-41 311.9 19.1 238 390-654 16-262 (276)
208 3fhr_A MAP kinase-activated pr 100.0 9.1E-37 3.1E-41 323.3 17.1 245 390-654 34-288 (336)
209 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1.6E-37 5.4E-42 328.1 11.2 249 390-654 39-319 (329)
210 3fme_A Dual specificity mitoge 100.0 1.2E-36 4.1E-41 314.8 17.4 244 390-653 12-266 (290)
211 2r3i_A Cell division protein k 100.0 2E-36 7E-41 314.7 19.0 254 390-653 8-283 (299)
212 2w5a_A Serine/threonine-protei 100.0 5.7E-37 2E-41 315.5 14.6 249 390-657 11-271 (279)
213 3n9x_A Phosphotransferase; mal 100.0 3E-36 1E-40 330.4 21.3 187 390-586 31-253 (432)
214 2j7t_A Serine/threonine-protei 100.0 5.4E-37 1.8E-41 319.5 14.6 242 390-654 24-276 (302)
215 2xrw_A Mitogen-activated prote 100.0 3.1E-36 1.1E-40 323.7 20.6 253 390-654 30-319 (371)
216 3pg1_A Mitogen-activated prote 100.0 2E-36 7E-41 323.8 19.0 250 390-654 27-317 (362)
217 1phk_A Phosphorylase kinase; g 100.0 3.5E-36 1.2E-40 312.8 20.0 242 390-653 22-283 (298)
218 2eu9_A Dual specificity protei 100.0 1.3E-36 4.6E-41 323.6 17.0 254 390-654 24-334 (355)
219 1blx_A Cyclin-dependent kinase 100.0 1.9E-36 6.6E-41 318.9 18.0 252 390-654 16-297 (326)
220 4e7w_A Glycogen synthase kinas 100.0 1.7E-36 6E-41 328.2 18.0 257 390-659 45-329 (394)
221 3qyz_A Mitogen-activated prote 100.0 1.3E-36 4.5E-41 325.8 16.8 251 390-654 32-314 (364)
222 2pml_X PFPK7, Ser/Thr protein 100.0 1.4E-36 4.8E-41 323.1 16.7 252 390-654 36-323 (348)
223 2rio_A Serine/threonine-protei 100.0 1.3E-36 4.3E-41 333.5 16.8 245 390-653 20-295 (434)
224 2y4i_B KSR2, HKSR2, kinase sup 100.0 3E-37 1E-41 324.1 11.0 246 390-662 38-304 (319)
225 2vwi_A Serine/threonine-protei 100.0 3.2E-37 1.1E-41 321.1 11.1 253 390-654 20-288 (303)
226 2j0j_A Focal adhesion kinase 1 100.0 2.7E-36 9.3E-41 346.5 19.8 246 390-661 395-652 (656)
227 1j1b_A Glycogen synthase kinas 100.0 1.4E-36 4.9E-41 331.7 16.6 259 390-659 59-344 (420)
228 3an0_A Dual specificity mitoge 100.0 1.7E-36 5.8E-41 321.6 16.5 245 390-654 56-311 (340)
229 3e3p_A Protein kinase, putativ 100.0 6.4E-36 2.2E-40 319.6 20.8 263 390-660 28-323 (360)
230 2fst_X Mitogen-activated prote 100.0 8.6E-37 2.9E-41 327.3 13.4 251 390-654 34-312 (367)
231 3cek_A Dual specificity protei 100.0 1.4E-35 4.7E-40 310.8 22.0 242 390-656 33-295 (313)
232 3eb0_A Putative uncharacterize 100.0 2.8E-36 9.5E-41 325.5 17.1 259 390-660 12-330 (383)
233 4exu_A Mitogen-activated prote 100.0 4.2E-36 1.5E-40 322.6 17.3 247 390-654 47-324 (371)
234 2wtk_C Serine/threonine-protei 100.0 1.5E-35 5.2E-40 309.0 20.9 239 390-654 10-264 (305)
235 2b9h_A MAP kinase FUS3, mitoge 100.0 8E-36 2.7E-40 317.9 18.9 251 390-654 16-306 (353)
236 2wei_A Calmodulin-domain prote 100.0 1.3E-35 4.6E-40 306.9 20.0 241 390-654 27-277 (287)
237 1zy4_A Serine/threonine-protei 100.0 1.4E-35 4.9E-40 308.3 19.9 241 390-654 11-284 (303)
238 3coi_A Mitogen-activated prote 100.0 3.7E-36 1.2E-40 320.8 15.7 247 390-654 29-306 (353)
239 3a99_A Proto-oncogene serine/t 100.0 5.1E-36 1.7E-40 315.3 15.0 233 390-654 48-294 (320)
240 3aln_A Dual specificity mitoge 100.0 1E-35 3.5E-40 313.7 17.3 249 390-654 27-286 (327)
241 2i6l_A Mitogen-activated prote 100.0 3.4E-36 1.2E-40 315.7 13.4 248 390-654 16-306 (320)
242 3p23_A Serine/threonine-protei 100.0 9.1E-36 3.1E-40 326.1 16.9 239 390-653 29-283 (432)
243 2dyl_A Dual specificity mitoge 100.0 1.1E-35 3.7E-40 311.9 14.9 241 390-653 30-283 (318)
244 3uqc_A Probable conserved tran 100.0 7E-35 2.4E-39 301.5 20.4 230 390-665 36-270 (286)
245 2iwi_A Serine/threonine-protei 100.0 1.7E-35 5.9E-40 309.8 14.3 233 390-654 36-284 (312)
246 3m2w_A MAP kinase-activated pr 100.0 2.8E-34 9.6E-39 299.0 20.0 228 390-655 23-258 (299)
247 2pzi_A Probable serine/threoni 100.0 1.1E-34 3.7E-39 336.0 17.8 233 390-659 85-327 (681)
248 3qa8_A MGC80376 protein; kinas 100.0 6.4E-35 2.2E-39 330.0 11.1 262 390-662 19-311 (676)
249 3dzo_A Rhoptry kinase domain; 100.0 4.4E-34 1.5E-38 311.3 14.7 236 390-653 83-363 (413)
250 2vuw_A Serine/threonine-protei 100.0 5.9E-33 2E-37 293.9 16.9 238 388-652 23-329 (336)
251 4azs_A Methyltransferase WBDD; 99.9 1E-28 3.5E-33 278.5 4.6 181 392-584 241-437 (569)
252 1ogq_A PGIP-2, polygalacturona 99.9 3.3E-27 1.1E-31 247.2 11.9 189 72-263 2-203 (313)
253 3en9_A Glycoprotease, O-sialog 99.9 2.3E-25 8E-30 249.8 8.1 177 390-586 341-539 (540)
254 3rgz_A Protein brassinosteroid 99.9 1E-24 3.5E-29 256.0 10.9 190 70-263 6-229 (768)
255 4eco_A Uncharacterized protein 99.9 1E-24 3.6E-29 250.3 7.0 184 75-263 29-336 (636)
256 4ecn_A Leucine-rich repeat pro 99.9 1.5E-24 5.2E-29 254.3 6.8 184 74-263 267-579 (876)
257 4fcg_A Uncharacterized protein 99.9 3E-22 1E-26 210.9 7.5 186 71-263 22-235 (328)
258 1zar_A RIO2 kinase; serine kin 99.8 1.5E-21 5.2E-26 200.7 10.6 151 390-570 95-274 (282)
259 3rgz_A Protein brassinosteroid 99.8 7.4E-22 2.5E-26 231.7 8.6 160 117-277 515-750 (768)
260 3m19_A Variable lymphocyte rec 99.8 7.6E-20 2.6E-24 184.8 15.2 151 117-268 36-193 (251)
261 3e6j_A Variable lymphocyte rec 99.8 3.6E-19 1.2E-23 177.3 13.9 148 96-246 12-172 (229)
262 1ogq_A PGIP-2, polygalacturona 99.8 3.8E-20 1.3E-24 193.5 6.8 143 118-261 127-272 (313)
263 2o6s_A Variable lymphocyte rec 99.8 1.7E-18 5.7E-23 169.6 13.9 146 104-250 7-165 (208)
264 2o6q_A Variable lymphocyte rec 99.8 1.3E-18 4.4E-23 177.8 13.6 146 117-263 38-187 (270)
265 2v70_A SLIT-2, SLIT homolog 2 99.8 7.1E-19 2.4E-23 174.0 10.5 146 120-269 15-168 (220)
266 2v9t_B SLIT homolog 2 protein 99.8 1.9E-18 6.6E-23 170.9 11.3 144 121-268 16-166 (220)
267 1zth_A RIO1 serine protein kin 99.7 4.3E-18 1.5E-22 172.7 11.7 132 390-539 52-219 (258)
268 2v70_A SLIT-2, SLIT homolog 2 99.7 8.7E-18 3E-22 166.2 13.1 147 104-250 11-170 (220)
269 3rfs_A Internalin B, repeat mo 99.7 1.8E-17 6.3E-22 169.4 15.3 151 116-269 63-220 (272)
270 2v9t_B SLIT homolog 2 protein 99.7 1E-17 3.5E-22 165.6 13.0 143 104-247 11-166 (220)
271 4fcg_A Uncharacterized protein 99.7 3.8E-18 1.3E-22 179.5 9.6 144 116-263 104-259 (328)
272 2o6q_A Variable lymphocyte rec 99.7 3.1E-17 1E-21 167.5 15.5 153 116-269 61-220 (270)
273 2xot_A Amphoterin-induced prot 99.7 3.3E-18 1.1E-22 182.4 7.9 166 104-270 18-205 (361)
274 3e6j_A Variable lymphocyte rec 99.7 3.9E-17 1.3E-21 162.5 14.5 153 106-268 14-173 (229)
275 1ozn_A Reticulon 4 receptor; N 99.7 3.1E-17 1.1E-21 168.7 11.9 145 117-262 57-206 (285)
276 1w8a_A SLIT protein; signaling 99.7 7.6E-18 2.6E-22 162.8 6.4 127 120-250 12-143 (192)
277 4g8a_A TOLL-like receptor 4; l 99.7 1.2E-17 4.1E-22 191.1 8.0 153 107-260 34-200 (635)
278 2z66_A Variable lymphocyte rec 99.7 2.1E-17 7.2E-22 171.9 9.0 155 104-260 7-178 (306)
279 1ozn_A Reticulon 4 receptor; N 99.7 6.9E-17 2.4E-21 166.2 12.4 147 116-263 32-183 (285)
280 1w8a_A SLIT protein; signaling 99.7 8.4E-17 2.9E-21 155.5 11.9 154 104-257 8-173 (192)
281 3m19_A Variable lymphocyte rec 99.7 1.7E-16 5.8E-21 160.1 14.6 154 103-263 4-161 (251)
282 2z81_A CD282 antigen, TOLL-lik 99.7 1.2E-17 4.1E-22 188.2 6.7 157 103-262 4-177 (549)
283 1p9a_G Platelet glycoprotein I 99.7 1.3E-16 4.3E-21 164.7 13.6 142 117-262 32-177 (290)
284 2z80_A TOLL-like receptor 2, v 99.7 1.8E-17 6.1E-22 176.1 6.6 165 96-263 23-204 (353)
285 2o6s_A Variable lymphocyte rec 99.7 5.4E-16 1.8E-20 151.6 16.0 146 119-268 10-162 (208)
286 3oja_B Anopheles plasmodium-re 99.7 6.5E-17 2.2E-21 184.2 10.6 170 94-264 10-202 (597)
287 3o6n_A APL1; leucine-rich repe 99.7 6.5E-17 2.2E-21 174.2 9.4 169 95-264 5-196 (390)
288 2id5_A Lingo-1, leucine rich r 99.7 1.1E-16 3.9E-21 177.1 11.6 158 105-263 12-182 (477)
289 3v47_A TOLL-like receptor 5B a 99.7 7.8E-17 2.7E-21 177.1 10.1 151 105-256 9-177 (455)
290 3rfs_A Internalin B, repeat mo 99.7 2.9E-16 9.7E-21 160.5 13.5 134 116-250 85-222 (272)
291 1p9a_G Platelet glycoprotein I 99.7 1.8E-16 6.2E-21 163.6 11.7 149 116-269 55-210 (290)
292 2z66_A Variable lymphocyte rec 99.7 9.5E-17 3.3E-21 166.8 9.6 140 117-256 102-246 (306)
293 3zyi_A Leucine-rich repeat-con 99.7 1.9E-16 6.4E-21 174.1 12.5 157 105-262 55-247 (452)
294 2o6r_A Variable lymphocyte rec 99.7 3.1E-16 1.1E-20 149.3 11.8 130 105-250 8-141 (177)
295 2z62_A TOLL-like receptor 4, v 99.7 1.6E-16 5.3E-21 162.7 10.1 143 117-260 29-176 (276)
296 2z62_A TOLL-like receptor 4, v 99.7 3.6E-16 1.2E-20 160.0 12.7 152 117-269 77-239 (276)
297 3vq2_A TLR4, TOLL-like recepto 99.7 1.3E-16 4.6E-21 181.9 9.8 152 107-259 14-179 (606)
298 2ft3_A Biglycan; proteoglycan, 99.6 4.2E-16 1.5E-20 164.0 12.5 157 104-264 33-203 (332)
299 4eco_A Uncharacterized protein 99.6 4.2E-17 1.4E-21 187.1 5.1 133 127-263 194-359 (636)
300 3v47_A TOLL-like receptor 5B a 99.6 1.8E-16 6.2E-21 174.2 9.9 130 141-270 275-411 (455)
301 3t6q_A CD180 antigen; protein- 99.6 2.1E-16 7.1E-21 180.3 10.7 154 106-260 14-180 (606)
302 4b8c_D Glucose-repressible alc 99.6 8.3E-17 2.8E-21 186.8 7.2 178 73-256 129-339 (727)
303 1xku_A Decorin; proteoglycan, 99.6 6.1E-16 2.1E-20 162.6 12.5 141 104-246 31-184 (330)
304 2ell_A Acidic leucine-rich nuc 99.6 2.1E-16 7.1E-21 149.1 8.0 132 116-251 24-164 (168)
305 3j0a_A TOLL-like receptor 5; m 99.6 3.6E-16 1.2E-20 185.2 11.5 86 187-272 480-565 (844)
306 3vq2_A TLR4, TOLL-like recepto 99.6 2.3E-16 7.9E-21 179.9 9.5 142 117-260 377-524 (606)
307 2xwt_C Thyrotropin receptor; s 99.6 2.1E-16 7.3E-21 158.1 6.5 141 116-260 31-182 (239)
308 2wfh_A SLIT homolog 2 protein 99.6 1.4E-15 4.9E-20 146.9 12.0 123 120-247 14-140 (193)
309 4g8a_A TOLL-like receptor 4; l 99.6 8.8E-16 3E-20 175.6 12.4 152 105-263 23-179 (635)
310 3cvr_A Invasion plasmid antige 99.6 5.3E-16 1.8E-20 174.0 9.6 151 95-265 35-191 (571)
311 1wwl_A Monocyte differentiatio 99.6 1.4E-16 4.9E-21 166.2 4.6 135 117-254 122-273 (312)
312 3zyj_A Leucine-rich repeat-con 99.6 1.4E-15 4.6E-20 166.7 12.5 154 116-271 112-296 (440)
313 3j0a_A TOLL-like receptor 5; m 99.6 6.6E-16 2.2E-20 183.0 10.5 149 105-256 15-171 (844)
314 4ecn_A Leucine-rich repeat pro 99.6 2E-16 6.9E-21 185.6 5.6 144 116-263 448-625 (876)
315 3oja_A Leucine-rich immune mol 99.6 2.4E-16 8.2E-21 174.8 5.6 145 117-268 100-251 (487)
316 3zyi_A Leucine-rich repeat-con 99.6 1.8E-15 6.3E-20 166.2 12.5 154 116-271 123-307 (452)
317 2je0_A Acidic leucine-rich nuc 99.6 3.7E-16 1.2E-20 144.2 5.8 122 117-241 18-148 (149)
318 4ezg_A Putative uncharacterize 99.6 9.7E-16 3.3E-20 148.6 9.0 140 117-263 45-187 (197)
319 4glp_A Monocyte differentiatio 99.6 5.3E-16 1.8E-20 161.7 7.1 148 116-265 117-283 (310)
320 1ziw_A TOLL-like receptor 3; i 99.6 1.2E-15 4.1E-20 176.5 10.2 149 105-254 5-166 (680)
321 3t6q_A CD180 antigen; protein- 99.6 8E-16 2.7E-20 175.5 8.5 143 116-259 376-526 (606)
322 3oja_A Leucine-rich immune mol 99.6 6.9E-16 2.4E-20 171.1 7.4 97 165-262 120-219 (487)
323 3zyj_A Leucine-rich repeat-con 99.6 3.2E-15 1.1E-19 163.7 12.0 141 105-246 44-198 (440)
324 2ft3_A Biglycan; proteoglycan, 99.6 2.7E-15 9.1E-20 157.9 10.9 143 117-263 124-270 (332)
325 2id5_A Lingo-1, leucine rich r 99.6 1.5E-15 5.3E-20 167.9 9.5 147 116-263 56-206 (477)
326 1xku_A Decorin; proteoglycan, 99.6 2.4E-15 8.1E-20 158.1 10.4 144 117-263 122-269 (330)
327 3oja_B Anopheles plasmodium-re 99.6 2.5E-15 8.6E-20 171.1 11.1 108 117-225 76-185 (597)
328 3a79_B TLR6, VLRB.59, TOLL-lik 99.6 3.4E-15 1.2E-19 168.7 12.0 150 115-269 352-512 (562)
329 2je0_A Acidic leucine-rich nuc 99.6 9.4E-16 3.2E-20 141.5 5.9 123 139-263 15-146 (149)
330 2ell_A Acidic leucine-rich nuc 99.6 2.7E-15 9.2E-20 141.4 9.1 125 138-264 21-154 (168)
331 1wwl_A Monocyte differentiatio 99.6 5.3E-16 1.8E-20 161.8 4.3 146 116-262 95-258 (312)
332 4gyi_A RIO2 kinase; protein ki 99.6 3.2E-15 1.1E-19 158.0 10.2 132 390-538 100-264 (397)
333 2xot_A Amphoterin-induced prot 99.6 5.1E-15 1.7E-19 157.7 11.8 148 107-263 14-169 (361)
334 1xeu_A Internalin C; cellular 99.6 4.8E-15 1.6E-19 150.6 10.7 138 116-263 41-178 (263)
335 2z63_A TOLL-like receptor 4, v 99.6 3.2E-15 1.1E-19 168.9 10.2 151 117-269 374-533 (570)
336 2wfh_A SLIT homolog 2 protein 99.6 5.9E-15 2E-19 142.6 10.3 120 104-225 10-140 (193)
337 2z7x_B TOLL-like receptor 1, v 99.6 3.4E-15 1.1E-19 167.0 9.8 148 116-268 324-482 (520)
338 4glp_A Monocyte differentiatio 99.6 1.5E-15 5E-20 158.3 6.1 146 117-263 92-257 (310)
339 2z63_A TOLL-like receptor 4, v 99.6 3.5E-15 1.2E-19 168.6 9.4 143 116-259 28-175 (570)
340 1ziw_A TOLL-like receptor 3; i 99.6 9E-15 3.1E-19 169.1 12.9 140 131-271 471-626 (680)
341 2xwt_C Thyrotropin receptor; s 99.6 2.6E-15 9E-20 150.1 7.3 144 116-263 55-211 (239)
342 4ezg_A Putative uncharacterize 99.6 3.4E-15 1.2E-19 144.7 7.1 128 116-247 66-195 (197)
343 2z81_A CD282 antigen, TOLL-lik 99.5 6.2E-15 2.1E-19 166.0 10.2 146 116-269 361-512 (549)
344 3o6n_A APL1; leucine-rich repe 99.5 1.1E-14 3.9E-19 156.5 11.3 107 117-225 70-179 (390)
345 3a79_B TLR6, VLRB.59, TOLL-lik 99.5 8.5E-15 2.9E-19 165.5 10.5 125 138-263 350-479 (562)
346 2z7x_B TOLL-like receptor 1, v 99.5 4.2E-15 1.5E-19 166.2 7.4 125 138-263 321-450 (520)
347 4ay9_X Follicle-stimulating ho 99.5 1.3E-14 4.4E-19 153.9 10.5 95 104-199 9-116 (350)
348 3o53_A Protein LRIM1, AGAP0063 99.5 2.9E-15 1E-19 156.6 4.6 143 116-262 58-219 (317)
349 3o53_A Protein LRIM1, AGAP0063 99.5 1.7E-15 5.8E-20 158.3 2.4 137 117-260 100-240 (317)
350 1h6t_A Internalin B; cell adhe 99.5 2.8E-14 9.7E-19 147.1 10.7 137 116-263 68-206 (291)
351 4b8c_D Glucose-repressible alc 99.5 1.5E-15 5.3E-20 176.1 1.1 137 115-256 223-364 (727)
352 1dce_A Protein (RAB geranylger 99.5 2.3E-14 7.9E-19 161.3 9.8 117 118-240 443-567 (567)
353 1ds9_A Outer arm dynein; leuci 99.5 1.1E-16 3.8E-21 155.4 -8.5 143 117-264 19-181 (198)
354 1h6t_A Internalin B; cell adhe 99.5 4E-14 1.4E-18 146.0 10.2 136 116-263 46-184 (291)
355 1h6u_A Internalin H; cell adhe 99.5 4.8E-14 1.6E-18 146.7 10.5 137 116-263 63-201 (308)
356 1h6u_A Internalin H; cell adhe 99.5 3.7E-14 1.3E-18 147.5 9.7 139 116-263 85-223 (308)
357 2z80_A TOLL-like receptor 2, v 99.5 4.5E-14 1.5E-18 149.8 9.6 149 107-263 26-180 (353)
358 2o6r_A Variable lymphocyte rec 99.5 6.1E-14 2.1E-18 133.3 9.4 112 116-228 28-141 (177)
359 3g39_A Variable lymphocyte rec 99.5 1.2E-13 4E-18 130.5 10.9 105 119-227 12-118 (170)
360 1m9s_A Internalin B; cell inva 99.5 7.5E-14 2.6E-18 158.1 10.7 137 116-263 65-203 (605)
361 3g39_A Variable lymphocyte rec 99.5 1.4E-13 4.7E-18 130.1 10.7 104 143-249 11-118 (170)
362 3cvr_A Invasion plasmid antige 99.5 1E-13 3.6E-18 155.4 11.1 117 117-251 81-197 (571)
363 1a9n_A U2A', U2A'; complex (nu 99.5 5.8E-14 2E-18 133.3 7.1 124 117-246 20-153 (176)
364 2r9u_A Variable lymphocyte rec 99.5 2.2E-13 7.4E-18 129.2 10.9 104 119-226 15-120 (174)
365 2r9u_A Variable lymphocyte rec 99.4 2.8E-13 9.7E-18 128.4 11.3 104 144-251 15-122 (174)
366 1jl5_A Outer protein YOPM; leu 99.4 1.9E-14 6.5E-19 158.0 3.2 134 116-261 11-157 (454)
367 1m9s_A Internalin B; cell inva 99.4 1.5E-13 5.2E-18 155.6 9.4 136 116-263 43-181 (605)
368 1o6v_A Internalin A; bacterial 99.4 2.1E-13 7.1E-18 150.4 10.1 139 116-263 221-359 (466)
369 1a9n_A U2A', U2A'; complex (nu 99.4 1.2E-13 4.1E-18 131.2 6.9 123 136-264 14-147 (176)
370 1dce_A Protein (RAB geranylger 99.4 1.3E-13 4.4E-18 155.3 7.6 116 142-262 442-565 (567)
371 3bz5_A Internalin-J, INLJ; leu 99.4 4.7E-13 1.6E-17 147.0 11.3 124 116-250 148-281 (457)
372 1jl5_A Outer protein YOPM; leu 99.4 8E-13 2.7E-17 145.0 12.9 133 116-263 111-243 (454)
373 3g06_A SSPH2 (leucine-rich rep 99.4 2.4E-13 8.2E-18 154.3 7.2 152 95-264 14-171 (622)
374 1o6v_A Internalin A; bacterial 99.4 6.7E-13 2.3E-17 146.3 10.3 138 116-262 199-336 (466)
375 1xeu_A Internalin C; cellular 99.4 7.9E-13 2.7E-17 134.2 9.8 123 116-248 63-187 (263)
376 4fmz_A Internalin; leucine ric 99.4 6.4E-13 2.2E-17 140.3 9.2 139 116-262 177-316 (347)
377 2ifg_A High affinity nerve gro 99.4 6.8E-13 2.3E-17 140.2 9.4 106 104-225 8-117 (347)
378 3bz5_A Internalin-J, INLJ; leu 99.4 2.5E-12 8.4E-17 141.2 13.5 133 116-262 106-238 (457)
379 2ast_B S-phase kinase-associat 99.4 1.7E-14 5.9E-19 151.6 -4.6 147 116-263 93-253 (336)
380 4fmz_A Internalin; leucine ric 99.4 6.9E-13 2.3E-17 140.1 7.6 137 116-263 199-339 (347)
381 2ast_B S-phase kinase-associat 99.3 4.2E-14 1.5E-18 148.6 -4.9 146 116-263 70-228 (336)
382 2ca6_A RAN GTPase-activating p 99.3 7.2E-14 2.4E-18 150.1 -4.5 148 116-263 60-250 (386)
383 3g06_A SSPH2 (leucine-rich rep 99.3 7.8E-12 2.7E-16 141.9 11.3 132 117-262 122-289 (622)
384 2ifg_A High affinity nerve gro 99.3 5.3E-12 1.8E-16 133.4 9.3 102 144-247 11-117 (347)
385 3tm0_A Aminoglycoside 3'-phosp 99.2 3.5E-11 1.2E-15 121.8 12.6 136 391-537 20-212 (263)
386 3goz_A Leucine-rich repeat-con 99.2 4E-13 1.4E-17 143.0 -2.4 135 117-251 23-185 (362)
387 2ca6_A RAN GTPase-activating p 99.2 3.5E-13 1.2E-17 144.7 -3.2 148 116-263 32-222 (386)
388 1ds9_A Outer arm dynein; leuci 99.2 9.2E-14 3.1E-18 134.7 -7.6 123 137-263 14-146 (198)
389 3goz_A Leucine-rich repeat-con 99.2 1.5E-12 5.1E-17 138.6 0.6 129 121-250 3-155 (362)
390 4ay9_X Follicle-stimulating ho 99.2 6.2E-11 2.1E-15 125.4 9.7 139 109-256 7-152 (350)
391 1z7x_W Ribonuclease inhibitor; 99.1 1.7E-12 5.8E-17 142.6 -7.4 148 116-263 227-404 (461)
392 1nd4_A Aminoglycoside 3'-phosp 99.1 5.5E-10 1.9E-14 112.3 11.4 131 392-537 26-213 (264)
393 1z7x_W Ribonuclease inhibitor; 99.0 1.7E-12 5.9E-17 142.5 -8.7 137 116-253 199-361 (461)
394 3rw6_A Nuclear RNA export fact 99.0 1.3E-12 4.5E-17 131.5 -9.0 159 105-266 79-260 (267)
395 3dxp_A Putative acyl-COA dehyd 98.9 2.2E-09 7.5E-14 113.8 11.3 140 391-538 44-248 (359)
396 3sg8_A APH(2'')-ID; antibiotic 98.9 1.4E-09 4.9E-14 112.5 5.9 183 391-585 26-287 (304)
397 3un9_A NLR family member X1; l 98.8 8E-11 2.7E-15 125.4 -6.0 133 116-248 101-254 (372)
398 3sb4_A Hypothetical leucine ri 98.8 6.2E-09 2.1E-13 108.9 8.3 141 117-262 102-302 (329)
399 3sb4_A Hypothetical leucine ri 98.7 5.4E-09 1.8E-13 109.4 5.7 131 131-263 83-280 (329)
400 3un9_A NLR family member X1; l 98.7 5.9E-11 2E-15 126.4 -11.0 146 117-263 73-245 (372)
401 3ogk_B Coronatine-insensitive 98.6 1.5E-09 5.1E-14 123.0 -5.8 131 117-248 379-528 (592)
402 3rw6_A Nuclear RNA export fact 98.5 4.8E-09 1.7E-13 105.4 -3.7 76 162-239 167-257 (267)
403 4gkh_A Aminoglycoside 3'-phosp 98.5 9.5E-07 3.3E-11 89.2 12.4 135 392-537 31-222 (272)
404 3r70_A Aminoglycoside phosphot 98.4 7.7E-07 2.6E-11 92.5 11.8 132 391-538 43-237 (320)
405 1io0_A Tropomodulin; LRR prote 98.4 6.8E-09 2.3E-13 99.0 -4.4 111 136-246 31-164 (185)
406 3ogk_B Coronatine-insensitive 98.4 1.1E-08 3.7E-13 115.9 -4.0 141 117-260 139-296 (592)
407 3tdw_A Gentamicin resistance p 98.3 4.7E-06 1.6E-10 85.9 13.5 136 391-538 25-224 (306)
408 3d1u_A Putative fructosamine-3 98.3 4.2E-06 1.5E-10 85.4 13.0 74 391-468 21-97 (288)
409 3ats_A Putative uncharacterize 98.2 2.4E-06 8.1E-11 90.1 9.7 80 391-470 26-122 (357)
410 2p1m_B Transport inhibitor res 98.2 4.2E-08 1.4E-12 111.0 -6.1 122 117-240 106-242 (594)
411 2p1m_B Transport inhibitor res 98.2 2.4E-08 8.4E-13 112.9 -8.4 105 140-246 371-494 (594)
412 3ovc_A Hygromycin-B 4-O-kinase 98.1 1.1E-05 3.8E-10 85.2 12.2 74 391-469 47-122 (362)
413 1io0_A Tropomodulin; LRR prote 98.1 1.7E-07 5.8E-12 89.2 -3.6 108 116-224 36-164 (185)
414 4fdw_A Leucine rich hypothetic 98.0 8.5E-06 2.9E-10 87.3 8.7 96 117-218 158-255 (401)
415 2ra8_A Uncharacterized protein 98.0 1.2E-06 4E-11 92.5 1.6 60 187-246 252-320 (362)
416 4fdw_A Leucine rich hypothetic 98.0 1.6E-05 5.5E-10 85.2 10.3 138 117-262 136-276 (401)
417 2olc_A MTR kinase, methylthior 97.8 3.1E-05 1.1E-09 82.8 8.8 74 391-466 36-120 (397)
418 2q83_A YTAA protein; 2635576, 97.8 7E-05 2.4E-09 78.0 10.4 143 391-537 38-251 (346)
419 3jr1_A Putative fructosamine-3 97.8 0.00011 3.7E-09 75.7 11.4 140 391-534 42-232 (312)
420 2ra8_A Uncharacterized protein 97.7 5.4E-06 1.8E-10 87.4 -0.5 126 117-244 194-341 (362)
421 3f7w_A Putative fructosamine-3 97.6 0.00039 1.3E-08 70.7 12.6 73 391-467 21-96 (288)
422 3rfe_A Platelet glycoprotein I 97.5 9.5E-05 3.2E-09 65.6 5.7 57 168-224 11-68 (130)
423 2pyw_A Uncharacterized protein 97.4 0.00069 2.4E-08 72.9 12.2 73 508-581 232-312 (420)
424 3dxq_A Choline/ethanolamine ki 97.4 0.00083 2.8E-08 68.7 12.0 71 391-468 24-95 (301)
425 1zyl_A Hypothetical protein YI 97.3 0.0014 4.8E-08 67.7 12.0 75 392-467 33-113 (328)
426 3e4g_A ATP synthase subunit S, 97.2 7.8E-05 2.7E-09 69.5 1.0 81 142-222 62-150 (176)
427 2qg7_A Ethanolamine kinase PV0 97.1 0.0022 7.4E-08 69.6 11.7 74 391-468 114-188 (458)
428 2ppq_A HSK, HK, homoserine kin 97.1 0.0032 1.1E-07 64.8 12.2 145 391-537 28-216 (322)
429 3csv_A Aminoglycoside phosphot 97.1 0.0015 5E-08 67.8 9.7 143 392-538 25-217 (333)
430 1nw1_A Choline kinase (49.2 KD 97.1 0.001 3.5E-08 71.8 8.4 73 391-468 79-159 (429)
431 3feg_A Choline/ethanolamine ki 97.1 0.0018 6.2E-08 68.3 10.1 143 391-537 56-253 (379)
432 3c5i_A Choline kinase; choline 96.8 0.0021 7.2E-08 67.7 8.3 74 391-468 39-121 (369)
433 1pgv_A TMD-1, tropomodulin TMD 96.8 0.00014 4.9E-09 69.0 -1.3 85 137-221 37-136 (197)
434 3e4g_A ATP synthase subunit S, 96.4 0.00086 2.9E-08 62.4 1.6 80 165-244 61-150 (176)
435 3i1a_A Spectinomycin phosphotr 96.3 0.01 3.4E-07 61.7 9.5 69 394-468 32-108 (339)
436 3rfe_A Platelet glycoprotein I 96.3 0.0058 2E-07 53.9 6.2 56 120-178 12-68 (130)
437 2yle_A Protein spire homolog 1 96.3 0.041 1.4E-06 52.5 12.3 102 467-584 34-135 (229)
438 4gt6_A Cell surface protein; l 96.1 0.0076 2.6E-07 64.0 7.3 110 131-245 255-369 (394)
439 3mes_A Choline kinase; malaria 96.1 0.0073 2.5E-07 64.7 6.8 74 391-468 76-157 (424)
440 1pgv_A TMD-1, tropomodulin TMD 96.0 0.00056 1.9E-08 64.9 -1.8 109 115-224 40-170 (197)
441 4fs7_A Uncharacterized protein 95.9 0.015 5E-07 61.7 8.1 134 117-260 231-369 (394)
442 4h09_A Hypothetical leucine ri 95.8 0.021 7.1E-07 60.1 8.8 123 136-262 212-338 (379)
443 3f2s_A CK, chetk-alpha, cholin 95.6 0.024 8.1E-07 60.1 8.4 143 391-537 58-279 (401)
444 4fs7_A Uncharacterized protein 95.6 0.029 9.8E-07 59.4 9.1 37 205-243 156-195 (394)
445 4gt6_A Cell surface protein; l 95.6 0.026 9E-07 59.7 8.6 100 158-262 258-362 (394)
446 4h09_A Hypothetical leucine ri 94.9 0.098 3.4E-06 54.8 10.6 104 134-241 233-341 (379)
447 3g15_A CK, chetk-alpha, cholin 91.6 0.46 1.6E-05 50.3 9.0 28 510-537 246-279 (401)
448 2k1k_A Ephrin type-A receptor 89.3 0.068 2.3E-06 35.6 -0.1 31 301-331 7-37 (38)
449 2ks1_B Epidermal growth factor 89.3 0.12 4E-06 35.5 1.1 31 305-335 11-41 (44)
450 2l2t_A Receptor tyrosine-prote 89.1 0.1 3.5E-06 35.7 0.7 31 305-335 10-40 (44)
451 4ann_A ESSB; membrane protein, 81.8 3.5 0.00012 39.1 7.6 116 439-586 43-158 (215)
452 2jwa_A Receptor tyrosine-prote 81.1 0.32 1.1E-05 33.3 0.1 29 306-335 13-41 (44)
453 4ano_A ESSB; membrane protein, 75.0 6.2 0.00021 37.5 7.0 115 439-586 48-163 (219)
454 3cxl_A N-chimerin; SH2, RHO-GA 59.0 0.98 3.3E-05 48.7 -2.4 57 391-451 148-214 (463)
455 2k9y_A Ephrin type-A receptor 54.5 2.4 8.2E-05 28.5 -0.2 6 311-316 19-24 (41)
456 3ls8_A Phosphatidylinositol 3- 39.1 1E+02 0.0036 33.8 9.6 47 484-537 453-501 (614)
457 2lz0_A Uncharacterized protein 36.2 51 0.0017 26.8 5.1 47 127-175 7-53 (100)
458 2klu_A T-cell surface glycopro 32.5 23 0.0008 26.2 2.1 17 310-326 12-29 (70)
459 1iij_A ERBB-2 receptor protein 30.2 5.3 0.00018 25.8 -1.4 24 308-332 11-34 (35)
460 2l34_A TYRO protein tyrosine k 26.8 11 0.00039 23.9 -0.3 26 303-328 5-30 (33)
461 2x6h_A GH13170P, VPS34, phosph 25.7 1.6E+02 0.0054 33.0 8.4 45 486-537 529-575 (696)
462 2llm_A Amyloid beta A4 protein 22.7 27 0.00091 23.5 0.0 24 303-326 15-38 (43)
No 1
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=5e-51 Score=428.85 Aligned_cols=252 Identities=24% Similarity=0.407 Sum_probs=202.1
Q ss_pred hccccccCeEEEEEEEEc------CCceEEEEEeecccc-ChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEee
Q 005693 390 AEVLGKGSYGTAYKAVLE------ESTTVVVKRLKEVVV-GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDY 462 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~ 462 (682)
.+.||+|+||+||+|++. +++.||||+++.... ..++|.+|+++++++ +|||||+++|+|.+++..++||||
T Consensus 46 ~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l-~HpnIV~l~g~~~~~~~~~lV~Ey 124 (329)
T 4aoj_A 46 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTML-QHQHIVRFFGVCTEGRPLLMVFEY 124 (329)
T ss_dssp EEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECSSSSEEEEEEC
T ss_pred EEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEECCEEEEEEEc
Confidence 578999999999999874 367899999976432 346799999999999 999999999999999999999999
Q ss_pred ccCCchhHhhccCCCC----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEee
Q 005693 463 FASGSLSTLLHGNRGA----------GRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISD 532 (682)
Q Consensus 463 ~~~g~L~~~l~~~~~~----------~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~D 532 (682)
|++|+|.++++..... ...+++|.+++.|+.|||+||+|||+.+ ||||||||+|||+++++.+||+|
T Consensus 125 ~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLKp~NILl~~~~~~Ki~D 201 (329)
T 4aoj_A 125 MRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGD 201 (329)
T ss_dssp CTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTTEEEECC
T ss_pred CCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecccccHhhEEECCCCcEEEcc
Confidence 9999999999764321 2346999999999999999999999987 99999999999999999999999
Q ss_pred cCCCCCCCCC------CCCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhh
Q 005693 533 FGLTPLMNVP------ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVR 605 (682)
Q Consensus 533 fGla~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-g~~Pf~~~~~~~~~~l~~~~~~~~~ 605 (682)
||+|+..... ....+|+.|||||++.+..|+.++|||||||++|||+| |+.||.+.... .....+..
T Consensus 202 FGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~------~~~~~i~~ 275 (329)
T 4aoj_A 202 FGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT------EAIDCITQ 275 (329)
T ss_dssp CC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHH------HHHHHHHH
T ss_pred cccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHH------HHHHHHHc
Confidence 9999865432 23457899999999999999999999999999999999 89999864322 11222221
Q ss_pred hccccccchhhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcC
Q 005693 606 EEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 662 (682)
Q Consensus 606 ~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~~ 662 (682)
.. .. .....+...+.+++.+||+.||++|||++||+++|+.+.+..
T Consensus 276 g~-~~----------~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~p 321 (329)
T 4aoj_A 276 GR-EL----------ERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAP 321 (329)
T ss_dssp TC-CC----------CCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHSC
T ss_pred CC-CC----------CCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhCC
Confidence 11 10 111223445778888999999999999999999999998754
No 2
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=6.9e-51 Score=422.20 Aligned_cols=252 Identities=28% Similarity=0.430 Sum_probs=199.6
Q ss_pred hhccccccCeEEEEEEEEcCCceEEEEEeeccccC---hhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccC
Q 005693 389 SAEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 465 (682)
Q Consensus 389 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~ 465 (682)
..+.||+|+||+||+|+++ ..||||+++..... .++|.+|+++++++ +|||||+++|++. ++..++|||||++
T Consensus 40 l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l-~HpNIV~l~g~~~-~~~~~iVmEy~~g 115 (307)
T 3omv_A 40 LSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKT-RHVNILLFMGYMT-KDNLAIVTQWCEG 115 (307)
T ss_dssp EEEECCCCSSSEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEC-SSSCEEEEECCSS
T ss_pred EeeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEE-CCeEEEEEEcCCC
Confidence 3578999999999999865 36999998754433 35689999999999 9999999999885 4578999999999
Q ss_pred CchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCC---
Q 005693 466 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP--- 542 (682)
Q Consensus 466 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~--- 542 (682)
|+|.++++... ..+++.+++.|+.|||.||+|||+++ ||||||||+|||+++++.+||+|||+|+.....
T Consensus 116 GsL~~~l~~~~----~~l~~~~~~~i~~qia~gL~yLH~~~---IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~ 188 (307)
T 3omv_A 116 SSLYKHLHVQE----TKFQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS 188 (307)
T ss_dssp CBHHHHHHTSC----CCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCSSSEEEETTEEEEECCCSSCBC-------
T ss_pred CCHHHHHhhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCccCHHHEEECCCCcEEEeeccCceecccCCcc
Confidence 99999997533 34999999999999999999999987 999999999999999999999999999875432
Q ss_pred ---CCCCCCCcccCcccccc---CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhh
Q 005693 543 ---ATPSRSAGYRAPEVIET---RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVE 616 (682)
Q Consensus 543 ---~~~~~~~~y~aPE~~~~---~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 616 (682)
....||+.|||||++.+ ..|+.++|||||||++|||+||+.||.+.... ......+...... +.
T Consensus 189 ~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~------~~~~~~~~~~~~~----p~ 258 (307)
T 3omv_A 189 QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNR------DQIIFMVGRGYAS----PD 258 (307)
T ss_dssp -----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH------HHHHHHHHTTCCC----CC
T ss_pred eeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChH------HHHHHHHhcCCCC----CC
Confidence 23468999999999964 45899999999999999999999999754321 1122222222111 11
Q ss_pred hccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCC
Q 005693 617 LMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 663 (682)
Q Consensus 617 l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~~~ 663 (682)
+. ....++...+.+++.+||+.||++||||+||++.|+.++...+
T Consensus 259 ~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~lp 303 (307)
T 3omv_A 259 LS--KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLP 303 (307)
T ss_dssp ST--TSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTCC
T ss_pred cc--cccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccCC
Confidence 10 0112234567778889999999999999999999999876543
No 3
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=7.2e-51 Score=423.70 Aligned_cols=248 Identities=25% Similarity=0.381 Sum_probs=203.3
Q ss_pred hccccccCeEEEEEEEEc------CCceEEEEEeecccc--ChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEe
Q 005693 390 AEVLGKGSYGTAYKAVLE------ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYD 461 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e 461 (682)
.+.||+|+||+||+|.+. +++.||||+++.... ..++|.+|+.++.++ +|||||+++|+|.+++..++|||
T Consensus 31 ~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l-~HpNIV~l~g~~~~~~~~~lV~E 109 (308)
T 4gt4_A 31 MEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARL-QHPNVVCLLGVVTKDQPLSMIFS 109 (308)
T ss_dssp EEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhC-CCCCCCCcceEEEECCEEEEEEE
Confidence 467999999999999863 467899999976533 357899999999999 99999999999999999999999
Q ss_pred eccCCchhHhhccCCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEE
Q 005693 462 YFASGSLSTLLHGNRGA-----------GRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCI 530 (682)
Q Consensus 462 ~~~~g~L~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl 530 (682)
||++|+|.++|+..... ....++|.++++|+.|||+||+|||+++ ||||||||+|||+++++.+||
T Consensus 110 y~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLK~~NILl~~~~~~Ki 186 (308)
T 4gt4_A 110 YCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKI 186 (308)
T ss_dssp CCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEE
T ss_pred cCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---CCCCCccccceEECCCCCEEE
Confidence 99999999999654311 1235899999999999999999999998 999999999999999999999
Q ss_pred eecCCCCCCCC------CCCCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHH
Q 005693 531 SDFGLTPLMNV------PATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSV 603 (682)
Q Consensus 531 ~DfGla~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-g~~Pf~~~~~~~~~~l~~~~~~~ 603 (682)
+|||+|+.... .....||+.|||||++.++.|+.++|||||||++|||+| |+.||.+....+ ....
T Consensus 187 ~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~------~~~~- 259 (308)
T 4gt4_A 187 SDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQD------VVEM- 259 (308)
T ss_dssp CCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHH------HHHH-
T ss_pred CCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHH------HHHH-
Confidence 99999976532 223457889999999999999999999999999999999 899998654221 1222
Q ss_pred hhhccccccchhhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHh
Q 005693 604 VREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEV 658 (682)
Q Consensus 604 ~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i 658 (682)
+...... ...+++...+.+++.+||+.||++||||+||+++|+.+
T Consensus 260 i~~~~~~----------~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 260 IRNRQVL----------PCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp HHTTCCC----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred HHcCCCC----------CCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 2221111 11123445677888899999999999999999999864
No 4
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=2.1e-51 Score=425.82 Aligned_cols=252 Identities=24% Similarity=0.440 Sum_probs=204.3
Q ss_pred hccccccCeEEEEEEEEc------CCceEEEEEeecccc-ChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEee
Q 005693 390 AEVLGKGSYGTAYKAVLE------ESTTVVVKRLKEVVV-GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDY 462 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~ 462 (682)
.+.||+|+||+||+|++. ++..||||+++.... ..++|.+|+++++++ +|||||+++|+|.+++..++||||
T Consensus 18 ~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l-~HpnIV~l~g~~~~~~~~~lV~Ey 96 (299)
T 4asz_A 18 KRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNL-QHEHIVKFYGVCVEGDPLIMVFEY 96 (299)
T ss_dssp EEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECSSSSEEEEEEC
T ss_pred eeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhC-CCCCCccEEEEEeeCCEEEEEEEc
Confidence 578999999999999864 367899999976432 356799999999999 999999999999999999999999
Q ss_pred ccCCchhHhhccCC--------CCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecC
Q 005693 463 FASGSLSTLLHGNR--------GAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFG 534 (682)
Q Consensus 463 ~~~g~L~~~l~~~~--------~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfG 534 (682)
|++|+|.++++... ......++|.+++.++.|||+||+|||+++ |+||||||+|||+++++.+||+|||
T Consensus 97 ~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDlKp~NILl~~~~~~Ki~DFG 173 (299)
T 4asz_A 97 MKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLLVKIGDFG 173 (299)
T ss_dssp CTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCS
T ss_pred CCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCccCHhhEEECCCCcEEECCcc
Confidence 99999999997542 122346999999999999999999999988 9999999999999999999999999
Q ss_pred CCCCCCCC------CCCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhc
Q 005693 535 LTPLMNVP------ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREE 607 (682)
Q Consensus 535 la~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-g~~Pf~~~~~~~~~~l~~~~~~~~~~~ 607 (682)
+|+..... ....+|+.|||||++.+..|+.++|||||||++|||+| |+.||.+.... .....+....
T Consensus 174 la~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~------~~~~~i~~~~ 247 (299)
T 4asz_A 174 MSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN------EVIECITQGR 247 (299)
T ss_dssp CHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH------HHHHHHHHTC
T ss_pred cceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH------HHHHHHHcCC
Confidence 99754332 12347889999999999999999999999999999999 89999865422 1122222111
Q ss_pred cccccchhhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcC
Q 005693 608 WTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 662 (682)
Q Consensus 608 ~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~~ 662 (682)
.. .....+...+.+++.+||+.||++|||++|+.+.|+++.+..
T Consensus 248 -~~----------~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~~ 291 (299)
T 4asz_A 248 -VL----------QRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKAS 291 (299)
T ss_dssp -CC----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHS
T ss_pred -CC----------CCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcC
Confidence 11 111223446778888999999999999999999999987654
No 5
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.4e-50 Score=422.05 Aligned_cols=261 Identities=22% Similarity=0.305 Sum_probs=197.1
Q ss_pred hccccccCeEEEEEEEEcCCceEEEEEeeccccChhhHHHHHHHHHHhcCCCceeceEEEEEecC----ceEEEEeeccC
Q 005693 390 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKD----EKLLVYDYFAS 465 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~----~~~lV~e~~~~ 465 (682)
.+.||+|+||+||+|+++ |+.||||+++........++.|+..+.++ +|||||++++++.+++ ..++||||+++
T Consensus 8 ~~~iG~G~fG~Vy~~~~~-g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l-~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~ 85 (303)
T 3hmm_A 8 QESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVML-RHENILGFIAADNKDNGTWTQLWLVSDYHEH 85 (303)
T ss_dssp EEEEEECSSSEEEEEEET-TEEEEEEEECGGGHHHHHHHHHHHTSTTC-CCTTBCCEEEEEEEECSSSEEEEEEEECCTT
T ss_pred EEEEeeCCCeEEEEEEEC-CEEEEEEEECccchhhHHHHHHHHHHhcC-CCCCCCcEEEEEEecCCCceEEEEEecCCCC
Confidence 578999999999999985 88999999976432222333444444566 8999999999998764 57999999999
Q ss_pred CchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-----CCCcEecCCCCCCeEecCCCCeEEeecCCCCCCC
Q 005693 466 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMG-----GPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN 540 (682)
Q Consensus 466 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~-----~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~ 540 (682)
|+|.++++.. .++|+.+.+++.|++.||+|||+++ .++|+||||||+|||+++++.+||+|||+|+...
T Consensus 86 gsL~~~l~~~------~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~ 159 (303)
T 3hmm_A 86 GSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 159 (303)
T ss_dssp CBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEE
T ss_pred CcHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCcccc
Confidence 9999999743 3899999999999999999999861 2459999999999999999999999999997653
Q ss_pred CC--------CCCCCCCcccCccccccC------CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCC--------ChhH
Q 005693 541 VP--------ATPSRSAGYRAPEVIETR------KHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMV--------DLPR 598 (682)
Q Consensus 541 ~~--------~~~~~~~~y~aPE~~~~~------~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~--------~l~~ 598 (682)
.. ....||+.|||||++.+. .++.++|||||||++|||+||+.||......+.. ....
T Consensus 160 ~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~ 239 (303)
T 3hmm_A 160 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVE 239 (303)
T ss_dssp TTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHH
T ss_pred CCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHH
Confidence 32 124589999999999764 3678999999999999999999887643322110 0111
Q ss_pred HHHHHhhhccccccchhhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcC
Q 005693 599 WVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 662 (682)
Q Consensus 599 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~~ 662 (682)
.......+. ..++.+.......+....+.+++.+||+.||++||||+||++.|+++.+..
T Consensus 240 ~~~~~~~~~----~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~~ 299 (303)
T 3hmm_A 240 EMRKVVCEQ----KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp HHHHHHTTS----CCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred HHHHHHhcc----cCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHHc
Confidence 122222111 112222111222356677889999999999999999999999999998654
No 6
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=1.5e-49 Score=417.28 Aligned_cols=240 Identities=20% Similarity=0.331 Sum_probs=199.2
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeecccc-ChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccCCc
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV-GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGS 467 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~ 467 (682)
.+.||+|+||+||+|+.. +++.||||++..... ..+.+.+|+++++++ +|||||++++++.+++..|+||||+++|+
T Consensus 79 ~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l-~HpnIV~l~~~~~~~~~~~ivmEy~~gg~ 157 (346)
T 4fih_A 79 FIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDY-QHENVVEMYNSYLVGDELWVVMEFLEGGA 157 (346)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEECCCTTEE
T ss_pred eEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhC-CCCCCCcEEEEEEECCEEEEEEeCCCCCc
Confidence 357999999999999976 578999999975533 456789999999999 99999999999999999999999999999
Q ss_pred hhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCC----C
Q 005693 468 LSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP----A 543 (682)
Q Consensus 468 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~----~ 543 (682)
|.+++... .+++.++..++.||+.||+|||+++ ||||||||+|||++.++.+||+|||+|+..... .
T Consensus 158 L~~~l~~~------~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~ 228 (346)
T 4fih_A 158 LTDIVTHT------RMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 228 (346)
T ss_dssp HHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBC
T ss_pred HHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEECCCCCEEEecCcCceecCCCCCccc
Confidence 99999742 3899999999999999999999998 999999999999999999999999999866432 3
Q ss_pred CCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhccccCh
Q 005693 544 TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNI 623 (682)
Q Consensus 544 ~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~ 623 (682)
+..||+.|||||++.+..|+.++||||+||++|||++|+.||.+.... .....+. +... +.+...
T Consensus 229 ~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~------~~~~~i~-~~~~-----~~~~~~--- 293 (346)
T 4fih_A 229 SLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL------KAMKMIR-DNLP-----PRLKNL--- 293 (346)
T ss_dssp CCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH------HHHHHHH-HSSC-----CCCSCG---
T ss_pred ccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH------HHHHHHH-cCCC-----CCCCcc---
Confidence 457999999999999999999999999999999999999999764321 1122221 1111 111111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 624 EEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 624 ~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
......+.+++.+||+.||++|||++|++++
T Consensus 294 ~~~s~~~~dli~~~L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 294 HKVSPSLKGFLDRLLVRDPAQRATAAELLKH 324 (346)
T ss_dssp GGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 1223455677779999999999999999874
No 7
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=1.9e-49 Score=415.31 Aligned_cols=245 Identities=21% Similarity=0.244 Sum_probs=200.2
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeeccccChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccCCch
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL 468 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~L 468 (682)
.++||+|+||+||+|+.. +++.||||+++.... ..+|+.+++++ +|||||++++++.+++..|+||||++||+|
T Consensus 63 ~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~----~~~E~~il~~l-~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L 137 (336)
T 4g3f_A 63 QPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF----RVEELVACAGL-SSPRIVPLYGAVREGPWVNIFMELLEGGSL 137 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC----CTHHHHTTTTC-CCTTBCCEEEEEEETTEEEEEECCCTTCBH
T ss_pred CcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh----HHHHHHHHHhC-CCCCCCcEEEEEEECCEEEEEEeccCCCcH
Confidence 467999999999999975 478999999975432 34689999998 999999999999999999999999999999
Q ss_pred hHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCC-CeEEeecCCCCCCCCC-----
Q 005693 469 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDL-DGCISDFGLTPLMNVP----- 542 (682)
Q Consensus 469 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~-~~kl~DfGla~~~~~~----- 542 (682)
.++++.. ..+++.++..++.||+.||+|||+++ ||||||||+|||++.++ .+||+|||+|+.....
T Consensus 138 ~~~l~~~-----~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~ 209 (336)
T 4g3f_A 138 GQLIKQM-----GCLPEDRALYYLGQALEGLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKS 209 (336)
T ss_dssp HHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCCGGGEEECTTSCCEEECCCTTCEEC--------
T ss_pred HHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccc
Confidence 9999743 24999999999999999999999998 99999999999999988 6999999999865432
Q ss_pred ----CCCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhc
Q 005693 543 ----ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELM 618 (682)
Q Consensus 543 ----~~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 618 (682)
....||+.|||||++.+..|+.++|||||||++|||+||+.||.+....+.. ..+..+..... .
T Consensus 210 ~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~------~~i~~~~~~~~------~ 277 (336)
T 4g3f_A 210 LLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLC------LKIASEPPPIR------E 277 (336)
T ss_dssp ----CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCH------HHHHHSCCGGG------G
T ss_pred eecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHH------HHHHcCCCCch------h
Confidence 2246899999999999999999999999999999999999999876544321 11111111000 0
Q ss_pred cccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcC
Q 005693 619 RFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 662 (682)
Q Consensus 619 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~~ 662 (682)
.... ....+.+++.+||+.||++|||++|++++|....+..
T Consensus 278 ~~~~---~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~ 318 (336)
T 4g3f_A 278 IPPS---CAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEV 318 (336)
T ss_dssp SCTT---SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred cCcc---CCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhh
Confidence 1112 2344566777999999999999999999998877544
No 8
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=2.5e-49 Score=419.25 Aligned_cols=257 Identities=26% Similarity=0.370 Sum_probs=206.9
Q ss_pred hhccccccCeEEEEEEEEcC------CceEEEEEeecccc--ChhhHHHHHHHHHHhcCCCceeceEEEEEec-CceEEE
Q 005693 389 SAEVLGKGSYGTAYKAVLEE------STTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSK-DEKLLV 459 (682)
Q Consensus 389 ~~~~lG~G~fg~Vy~~~~~~------~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~-~~~~lV 459 (682)
..+.||+|+||+||+|.+.. ++.||||+++.... ..++|.+|++++.++.+|||||+++|+|.++ +..++|
T Consensus 68 l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~~~iV 147 (353)
T 4ase_A 68 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVI 147 (353)
T ss_dssp EEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEE
T ss_pred EeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCEEEEE
Confidence 36789999999999999653 25799999976533 2457899999999997779999999999764 568999
Q ss_pred EeeccCCchhHhhccCCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCe
Q 005693 460 YDYFASGSLSTLLHGNRG-----------AGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDG 528 (682)
Q Consensus 460 ~e~~~~g~L~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~ 528 (682)
||||++|+|.++|+.... .....+++.+++.++.|||+||+|||+++ ||||||||+|||+++++.+
T Consensus 148 ~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~---iiHRDLK~~NILl~~~~~v 224 (353)
T 4ase_A 148 VEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVV 224 (353)
T ss_dssp EECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCE
T ss_pred EEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCC---eecCccCccceeeCCCCCE
Confidence 999999999999975432 11345899999999999999999999998 9999999999999999999
Q ss_pred EEeecCCCCCCCCCC------CCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHH
Q 005693 529 CISDFGLTPLMNVPA------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQ 601 (682)
Q Consensus 529 kl~DfGla~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-g~~Pf~~~~~~~~~~l~~~~~ 601 (682)
||+|||+|+...... ...+|+.|||||++.+..|+.++|||||||++|||+| |+.||.+....+ .+.
T Consensus 225 Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~------~~~ 298 (353)
T 4ase_A 225 KICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE------EFC 298 (353)
T ss_dssp EECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH------HHH
T ss_pred EECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHH------HHH
Confidence 999999998764432 2246888999999999999999999999999999998 899998654221 222
Q ss_pred HHhhhccccccchhhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCCC
Q 005693 602 SVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSE 664 (682)
Q Consensus 602 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~~~~ 664 (682)
..+.+...... .+.....+.+++.+||+.||++|||++|++++|+.+.+...+
T Consensus 299 ~~i~~g~~~~~----------p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~~~~ 351 (353)
T 4ase_A 299 RRLKEGTRMRA----------PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQ 351 (353)
T ss_dssp HHHHHTCCCCC----------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTC-
T ss_pred HHHHcCCCCCC----------CccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHHhhC
Confidence 22222221111 112334567788899999999999999999999999876543
No 9
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=4.8e-49 Score=405.40 Aligned_cols=241 Identities=24% Similarity=0.391 Sum_probs=192.3
Q ss_pred ccccccCeEEEEEEEEcC-CceEEEEEeeccccC---hhhHHHHHHHHHHhcCCCceeceEEEEEe----cCceEEEEee
Q 005693 391 EVLGKGSYGTAYKAVLEE-STTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYS----KDEKLLVYDY 462 (682)
Q Consensus 391 ~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~----~~~~~lV~e~ 462 (682)
+.||+|+||+||+|.+.. +..||+|++...... .+.|.+|+++++++ +|||||++++++.+ ++..|+||||
T Consensus 32 ~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIV~~~~~~~~~~~~~~~~~lvmEy 110 (290)
T 3fpq_A 32 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGL-QHPNIVRFYDSWESTVKGKKCIVLVTEL 110 (290)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEEEEETTEEEEEEEEEC
T ss_pred eEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEeeccCCCcEEEEEEeC
Confidence 569999999999999764 678999999765433 35688999999999 99999999999875 3457999999
Q ss_pred ccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecC-CCCeEEeecCCCCCCCC
Q 005693 463 FASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQ-DLDGCISDFGLTPLMNV 541 (682)
Q Consensus 463 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~-~~~~kl~DfGla~~~~~ 541 (682)
|++|+|.++++.. ..+++..+..++.||+.||+|||+++ ++|+||||||+|||++. ++.+||+|||+|+....
T Consensus 111 ~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~ylH~~~-~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~ 184 (290)
T 3fpq_A 111 MTSGTLKTYLKRF-----KVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 184 (290)
T ss_dssp CCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred CCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC-CCEEecccChhheeEECCCCCEEEEeCcCCEeCCC
Confidence 9999999999743 34899999999999999999999985 56999999999999984 79999999999986543
Q ss_pred C--CCCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhcc
Q 005693 542 P--ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMR 619 (682)
Q Consensus 542 ~--~~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 619 (682)
. .+..||+.|||||++.+ .|+.++|||||||++|||+||+.||.+... .......+ ........++
T Consensus 185 ~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~-----~~~~~~~i-~~~~~~~~~~----- 252 (290)
T 3fpq_A 185 SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQN-----AAQIYRRV-TSGVKPASFD----- 252 (290)
T ss_dssp TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSS-----HHHHHHHH-TTTCCCGGGG-----
T ss_pred CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCc-----HHHHHHHH-HcCCCCCCCC-----
Confidence 3 24569999999999865 699999999999999999999999975321 11112222 1111111111
Q ss_pred ccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 620 FQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 620 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
... ...+.+++.+||+.||++|||++|++++
T Consensus 253 -~~~---~~~~~~li~~~L~~dP~~R~s~~e~l~H 283 (290)
T 3fpq_A 253 -KVA---IPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp -GCC---CHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred -ccC---CHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 111 2246677889999999999999999874
No 10
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=7.4e-49 Score=412.74 Aligned_cols=241 Identities=18% Similarity=0.377 Sum_probs=194.8
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeeccccC---hhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccC
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 465 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~ 465 (682)
.+.||+|+||+||+|+.. +++.||||++...... .+.+.+|+++++++ +|||||++++++.+++..|+||||++|
T Consensus 29 ~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIV~~~~~~~~~~~~yiVmEy~~g 107 (350)
T 4b9d_A 29 LQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANM-KHPNIVQYRESFEENGSLYIVMDYCEG 107 (350)
T ss_dssp EEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred eEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHC-CCCCCCcEEEEEEECCEEEEEEeCCCC
Confidence 478999999999999975 5789999999765433 35688999999999 999999999999999999999999999
Q ss_pred CchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCCC--
Q 005693 466 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA-- 543 (682)
Q Consensus 466 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~-- 543 (682)
|+|.+++...+ ...+++.+++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+|+......
T Consensus 108 g~L~~~i~~~~---~~~~~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~ 181 (350)
T 4b9d_A 108 GDLFKRINAQK---GVLFQEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVEL 181 (350)
T ss_dssp CBHHHHHHHTT---TCCCCHHHHHHHHHHHHHHHHHHHHTT---CEETTCCGGGEEECTTCCEEECSTTEESCCCHHHHH
T ss_pred CcHHHHHHHcC---CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHHHEEECCCCCEEEcccccceeecCCccc
Confidence 99999997543 234789999999999999999999998 9999999999999999999999999998775432
Q ss_pred --CCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhcccc
Q 005693 544 --TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQ 621 (682)
Q Consensus 544 --~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 621 (682)
+..||+.|||||++.+..|+.++|||||||++|||+||+.||.+.+ .......+....... ...
T Consensus 182 ~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~------~~~~~~~i~~~~~~~--------~~~ 247 (350)
T 4b9d_A 182 ARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGS------MKNLVLKIISGSFPP--------VSL 247 (350)
T ss_dssp HHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHHTCCCC--------CCT
T ss_pred ccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC------HHHHHHHHHcCCCCC--------CCc
Confidence 3458999999999999999999999999999999999999998643 222233333322110 011
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 622 NIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 622 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
.+ ...+.+++.+||+.||++|||++|++++
T Consensus 248 ~~---s~~~~~li~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 248 HY---SYDLRSLVSQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp TS---CHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred cC---CHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 12 2346677779999999999999999873
No 11
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=2.5e-48 Score=417.97 Aligned_cols=240 Identities=20% Similarity=0.341 Sum_probs=199.0
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeecccc-ChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccCCc
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV-GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGS 467 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~ 467 (682)
.+.||+|+||.||+|+.. +++.||||++..... ..+.+.+|+++++++ +|||||++++++.+++..|+|||||++|+
T Consensus 156 ~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l-~HpnIV~l~~~~~~~~~~~iVmEy~~gG~ 234 (423)
T 4fie_A 156 FIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDY-QHENVVEMYNSYLVGDELWVVMEFLEGGA 234 (423)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEECCTTEE
T ss_pred eeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhC-CCCCCCceEEEEEECCEEEEEEeCCCCCc
Confidence 467999999999999976 478999999975533 456789999999999 99999999999999999999999999999
Q ss_pred hhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCC----C
Q 005693 468 LSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP----A 543 (682)
Q Consensus 468 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~----~ 543 (682)
|.++++.. .+++.++..++.||+.||+|||+++ ||||||||+||||+.++.+||+|||+|+..... .
T Consensus 235 L~~~i~~~------~l~e~~~~~~~~qil~aL~ylH~~~---IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~ 305 (423)
T 4fie_A 235 LTDIVTHT------RMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 305 (423)
T ss_dssp HHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCBC
T ss_pred HHHHHhcc------CCCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCCCCEEEecCccceECCCCCcccc
Confidence 99999742 3899999999999999999999998 999999999999999999999999999866433 3
Q ss_pred CCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhccccCh
Q 005693 544 TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNI 623 (682)
Q Consensus 544 ~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~ 623 (682)
+..||+.|||||++.+..|+.++|||||||++|||++|+.||.+.... .....+. +... +.+.....+
T Consensus 306 ~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~------~~~~~i~-~~~~-----~~~~~~~~~ 373 (423)
T 4fie_A 306 SLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL------KAMKMIR-DNLP-----PRLKNLHKV 373 (423)
T ss_dssp CCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH------HHHHHHH-HSCC-----CCCSCTTSS
T ss_pred ccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH------HHHHHHH-cCCC-----CCCcccccC
Confidence 456899999999999999999999999999999999999999754321 1122211 1111 111112222
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 624 EEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 624 ~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
+ ..+.+++.+||+.||++|||++|++++
T Consensus 374 s---~~~~dli~~~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 374 S---PSLKGFLDRLLVRDPAQRATAAELLKH 401 (423)
T ss_dssp C---HHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred C---HHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 3 345667779999999999999999884
No 12
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=2.3e-48 Score=402.35 Aligned_cols=238 Identities=18% Similarity=0.293 Sum_probs=198.4
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeeccc----cChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeecc
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 464 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~ 464 (682)
.+.||+|+||+||+|+.. +++.||+|++.+.. ...+.+.+|+++++++ +|||||++++++++++..|+||||++
T Consensus 37 ~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~yivmEy~~ 115 (311)
T 4aw0_A 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLYFTFQDDEKLYFGLSYAK 115 (311)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEeCCEEEEEEecCC
Confidence 578999999999999975 57889999997542 2346789999999999 99999999999999999999999999
Q ss_pred CCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCC--
Q 005693 465 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP-- 542 (682)
Q Consensus 465 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~-- 542 (682)
+|+|.+++... ..+++.++..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+|+.....
T Consensus 116 gG~L~~~i~~~-----~~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~ 187 (311)
T 4aw0_A 116 NGELLKYIRKI-----GSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK 187 (311)
T ss_dssp TEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECCTTTT
T ss_pred CCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCC
Confidence 99999999743 24999999999999999999999998 999999999999999999999999999876422
Q ss_pred ----CCCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhc
Q 005693 543 ----ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELM 618 (682)
Q Consensus 543 ----~~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 618 (682)
.+.+||+.|||||++.+..|+.++||||+||++|||+||+.||.+.+. ......+......
T Consensus 188 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~------~~~~~~i~~~~~~--------- 252 (311)
T 4aw0_A 188 QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE------GLIFAKIIKLEYD--------- 252 (311)
T ss_dssp CCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHTCCC---------
T ss_pred cccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHcCCCC---------
Confidence 245799999999999999999999999999999999999999976432 2222333322211
Q ss_pred cccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 619 RFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 619 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
....++ ..+.+++.+|++.||++|||++|+..+
T Consensus 253 ~p~~~s---~~~~dli~~lL~~dp~~R~t~~e~~~~ 285 (311)
T 4aw0_A 253 FPEKFF---PKARDLVEKLLVLDATKRLGCEEMEGY 285 (311)
T ss_dssp CCTTCC---HHHHHHHHHHSCSSGGGSTTSGGGTCH
T ss_pred CCcccC---HHHHHHHHHHccCCHhHCcChHHHcCC
Confidence 111222 345677779999999999999997543
No 13
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.6e-47 Score=390.76 Aligned_cols=237 Identities=23% Similarity=0.364 Sum_probs=185.1
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeecccc----ChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeecc
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV----GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 464 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~----~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~ 464 (682)
.+.||+|+||+||+|+.. +++.||+|++..... ..+.+.+|+++++++ +|||||++++++.+++..|+||||+
T Consensus 18 ~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~~~~~~~~~~~~~ivmEy~- 95 (275)
T 3hyh_A 18 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLL-RHPHIIKLYDVIKSKDEIIMVIEYA- 95 (275)
T ss_dssp EEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEEECC-
T ss_pred EEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHC-CCCCCCeEEEEEEECCEEEEEEeCC-
Confidence 478999999999999964 578999999975432 245689999999999 8999999999999999999999999
Q ss_pred CCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCC--
Q 005693 465 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP-- 542 (682)
Q Consensus 465 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~-- 542 (682)
+|+|.+++... ..+++.++..++.||+.||+|||+++ |+||||||+|||+++++.+||+|||+|+.....
T Consensus 96 ~g~L~~~l~~~-----~~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~ 167 (275)
T 3hyh_A 96 GNELFDYIVQR-----DKMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF 167 (275)
T ss_dssp CEEHHHHHHHS-----CSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTTCCEEECCSSCC--------
T ss_pred CCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCChHHeEECCCCCEEEeecCCCeecCCCCc
Confidence 68999999743 34999999999999999999999998 999999999999999999999999999876543
Q ss_pred -CCCCCCCcccCccccccCCC-CCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhccc
Q 005693 543 -ATPSRSAGYRAPEVIETRKH-SHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 620 (682)
Q Consensus 543 -~~~~~~~~y~aPE~~~~~~~-~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 620 (682)
.+..||+.|||||++.+..+ +.++||||+||++|||+||+.||.+.+ .......+...... ..
T Consensus 168 ~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~------~~~~~~~i~~~~~~---------~p 232 (275)
T 3hyh_A 168 LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES------IPVLFKNISNGVYT---------LP 232 (275)
T ss_dssp -------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHTCCC---------CC
T ss_pred cCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCC------HHHHHHHHHcCCCC---------CC
Confidence 34579999999999998876 579999999999999999999997543 22222222222111 11
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 621 QNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 621 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
...+ ..+.+++.+||+.||++|||++|++++
T Consensus 233 ~~~s---~~~~~li~~~L~~dP~~R~s~~eil~h 263 (275)
T 3hyh_A 233 KFLS---PGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp TTSC---HHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred CCCC---HHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 1222 345677779999999999999999984
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=8.8e-48 Score=397.99 Aligned_cols=237 Identities=26% Similarity=0.393 Sum_probs=188.7
Q ss_pred hccccccCeEEEEEEEEc----CCceEEEEEeecccc---ChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEee
Q 005693 390 AEVLGKGSYGTAYKAVLE----ESTTVVVKRLKEVVV---GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDY 462 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~----~~~~vavK~l~~~~~---~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~ 462 (682)
.+.||+|+||+||+|+.. .++.||+|+++.... ....+.+|++++.++ +|||||++++++.+++..|+||||
T Consensus 29 ~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~~ivmEy 107 (304)
T 3ubd_A 29 LKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV-NHPFIVKLHYAFQTEGKLYLILDF 107 (304)
T ss_dssp EEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCC-CCTTEECEEEEEEETTEEEEEECC
T ss_pred EEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHC-CCCCCCeEEEEEEECCEEEEEEEc
Confidence 578999999999999863 357899999975432 234688899999998 999999999999999999999999
Q ss_pred ccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCC-
Q 005693 463 FASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV- 541 (682)
Q Consensus 463 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~- 541 (682)
++||+|.+++... ..+++.++..++.||+.||+|||+++ |+||||||+|||+++++.+||+|||+|+....
T Consensus 108 ~~gg~L~~~l~~~-----~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 179 (304)
T 3ubd_A 108 LRGGDLFTRLSKE-----VMFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDH 179 (304)
T ss_dssp CTTCEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTSCEEEESSEEEEC----
T ss_pred CCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHeEEcCCCCEEecccccceeccCC
Confidence 9999999999743 24999999999999999999999998 99999999999999999999999999986532
Q ss_pred ---CCCCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhc
Q 005693 542 ---PATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELM 618 (682)
Q Consensus 542 ---~~~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 618 (682)
..+..||+.|||||++.+..|+.++||||+||++|||+||+.||.+.+.. .....+......
T Consensus 180 ~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~------~~~~~i~~~~~~--------- 244 (304)
T 3ubd_A 180 EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRK------ETMTMILKAKLG--------- 244 (304)
T ss_dssp -CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHCCCC---------
T ss_pred CccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHH------HHHHHHHcCCCC---------
Confidence 23457999999999999999999999999999999999999999865322 222222222110
Q ss_pred cccChHHHHHHHHHHHHHcccCCCCCCCCH-----HHHHH
Q 005693 619 RFQNIEEEMVQMLQIGMACVAKVPDMRPNM-----DEVVR 653 (682)
Q Consensus 619 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~-----~evl~ 653 (682)
....++ ..+.+++.+||+.||++|||+ +|+++
T Consensus 245 ~p~~~s---~~~~~li~~~L~~dP~~R~ta~~~~~~eil~ 281 (304)
T 3ubd_A 245 MPQFLS---PEAQSLLRMLFKRNPANRLGAGPDGVEEIKR 281 (304)
T ss_dssp CCTTSC---HHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred CCCcCC---HHHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence 111222 345677779999999999984 56665
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=4.8e-46 Score=386.23 Aligned_cols=240 Identities=21% Similarity=0.354 Sum_probs=182.4
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeecccc--ChhhHHHHHHHHHHhcCCCceeceEEEEEecCc-----------
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDE----------- 455 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~----------- 455 (682)
.+.||+|+||+||+|+.. +++.||||+++.... ..+.+.+|+++++++ +|||||++++++.+.+.
T Consensus 10 ~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l-~HpnIV~~~~~~~~~~~~~~~~~~~~~~ 88 (299)
T 4g31_A 10 IQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKL-EHPGIVRYFNAWLEKNTTEKLQPSSPKV 88 (299)
T ss_dssp EEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEEEC----------CE
T ss_pred eeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEecCccccccccCCCc
Confidence 478999999999999975 578999999975432 245688999999999 99999999999976543
Q ss_pred -eEEEEeeccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecC
Q 005693 456 -KLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFG 534 (682)
Q Consensus 456 -~~lV~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfG 534 (682)
.|+||||+++|+|.+++..... ....++..++.++.||++||+|||+++ |+||||||+|||++.++.+||+|||
T Consensus 89 ~l~ivmE~~~gg~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~al~ylH~~~---IiHRDlKp~NILl~~~~~vKl~DFG 163 (299)
T 4g31_A 89 YLYIQMQLCRKENLKDWMNGRCT--IEERERSVCLHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFG 163 (299)
T ss_dssp EEEEEEECCCSCCHHHHHHTCCS--GGGSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECCCC
T ss_pred EEEEEEecCCCCcHHHHHHhcCC--CChhHHHHHHHHHHHHHHHHHHHHHCc---CccccCcHHHeEECCCCcEEEccCc
Confidence 6899999999999999975432 233567778999999999999999998 9999999999999999999999999
Q ss_pred CCCCCCCCC----------------CCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhH
Q 005693 535 LTPLMNVPA----------------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPR 598 (682)
Q Consensus 535 la~~~~~~~----------------~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~ 598 (682)
+|+...... +..||+.|||||++.+..|+.++|||||||++|||++ ||.... +...
T Consensus 164 la~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~-----~~~~ 235 (299)
T 4g31_A 164 LVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM-----ERVR 235 (299)
T ss_dssp CC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH-----HHHH
T ss_pred cceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc-----HHHH
Confidence 998764321 2358999999999999999999999999999999996 775321 0001
Q ss_pred HHHHHhhhccccccchhhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 599 WVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 599 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
..... ..... ............+++.+||+.||++|||++|++++
T Consensus 236 ~~~~~-~~~~~----------p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 280 (299)
T 4g31_A 236 TLTDV-RNLKF----------PPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN 280 (299)
T ss_dssp HHHHH-HTTCC----------CHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHH-hcCCC----------CCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 11111 11000 01112333445678889999999999999999873
No 16
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=8.7e-44 Score=379.12 Aligned_cols=188 Identities=23% Similarity=0.459 Sum_probs=164.1
Q ss_pred hccccccCeEEEEEEEEc----CCceEEEEEeeccccChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccC
Q 005693 390 AEVLGKGSYGTAYKAVLE----ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 465 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~----~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~ 465 (682)
.+.||+|+||+||+|+.+ .++.||+|++... .....+.+|++++..+.+|||||++++++.+++..|+||||+++
T Consensus 26 ~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~-~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvmE~~~g 104 (361)
T 4f9c_A 26 EDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT-SHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEH 104 (361)
T ss_dssp EEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT-SCHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEEECCCC
T ss_pred EEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc-cCHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEEeCCCc
Confidence 468999999999999864 3568999998654 33566889999999997899999999999999999999999999
Q ss_pred CchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCC-CCeEEeecCCCCCCCCC--
Q 005693 466 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQD-LDGCISDFGLTPLMNVP-- 542 (682)
Q Consensus 466 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~-~~~kl~DfGla~~~~~~-- 542 (682)
|+|.++++ .+++.++..++.|++.||+|||++| |+||||||+|||++.+ +.+||+|||+|+.....
T Consensus 105 ~~L~~~~~--------~l~~~~~~~~~~qll~al~ylH~~g---IiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~ 173 (361)
T 4f9c_A 105 ESFLDILN--------SLSFQEVREYMLNLFKALKRIHQFG---IVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKI 173 (361)
T ss_dssp CCHHHHHT--------TCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSC
T ss_pred ccHHHHHc--------CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCccc
Confidence 99999984 2889999999999999999999998 9999999999999877 79999999999654321
Q ss_pred ------------------------------CCCCCCCcccCccccccC-CCCCcchHHHHHHHHHHHHhCCCCCCCCC
Q 005693 543 ------------------------------ATPSRSAGYRAPEVIETR-KHSHKSDVYSFGVLLLEMLTGKAPLQSPT 589 (682)
Q Consensus 543 ------------------------------~~~~~~~~y~aPE~~~~~-~~~~~sDvwS~Gvvl~elltg~~Pf~~~~ 589 (682)
.+..||+.|+|||++.+. .|+.++||||+||++|||+||+.||....
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~ 251 (361)
T 4f9c_A 174 ELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKAS 251 (361)
T ss_dssp GGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCS
T ss_pred cccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCC
Confidence 123589999999999775 48999999999999999999999996543
No 17
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=4e-43 Score=378.10 Aligned_cols=249 Identities=21% Similarity=0.305 Sum_probs=191.5
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeeccccC---hhhHHHHHHHHHHhcCCCceeceEEEEEec------CceEEE
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSK------DEKLLV 459 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~------~~~~lV 459 (682)
.+.||+|+||+||+|+.. +++.||||+++..... .+.+.+|+++++.+ +|||||++++++... +..|+|
T Consensus 59 ~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~~~~~~~iv 137 (398)
T 4b99_A 59 IETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHF-KHDNIIAIKDILRPTVPYGEFKSVYVV 137 (398)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHC-CCTTBCCEEEECCCSSCTTTCCCEEEE
T ss_pred EEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhc-CCCCcceEeeeeecccccccCCEEEEE
Confidence 478999999999999975 5789999999765432 34678899999999 999999999998643 578999
Q ss_pred EeeccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCC
Q 005693 460 YDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM 539 (682)
Q Consensus 460 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~ 539 (682)
|||++ |+|.+++... ..+++..+..++.||+.||+|||+++ ||||||||+|||++.++.+||+|||+|+..
T Consensus 138 mE~~~-g~L~~~i~~~-----~~l~~~~~~~~~~qil~al~ylH~~~---iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~ 208 (398)
T 4b99_A 138 LDLME-SDLHQIIHSS-----QPLTLEHVRYFLYQLLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGL 208 (398)
T ss_dssp EECCS-EEHHHHHTSS-----SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTCCEEECCCTTCBCC
T ss_pred EeCCC-CCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCc---CcCCCcCccccccCCCCCEEEeecceeeec
Confidence 99996 6899999743 35999999999999999999999998 999999999999999999999999999865
Q ss_pred CC--------CCCCCCCCcccCccccccC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccc-
Q 005693 540 NV--------PATPSRSAGYRAPEVIETR-KHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWT- 609 (682)
Q Consensus 540 ~~--------~~~~~~~~~y~aPE~~~~~-~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~- 609 (682)
.. ..+..||+.|||||++.+. .++.++||||+||++|||++|+.||.+.+..+. ...+......
T Consensus 209 ~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~------l~~I~~~~g~p 282 (398)
T 4b99_A 209 CTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQ------LQLIMMVLGTP 282 (398)
T ss_dssp -------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHH------HHHHHHHHCCC
T ss_pred ccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHH------HHHHHHhcCCC
Confidence 32 2245789999999998875 468999999999999999999999986543221 1111110000
Q ss_pred -cccc--------h---hhhc--cccCh----HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 610 -AEVF--------D---VELM--RFQNI----EEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 610 -~~~~--------d---~~l~--~~~~~----~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
.... . ..+. ..... ......+.+|+.+||+.||++|||++|++++
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 283 SPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp CGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred ChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 0000 0 0000 00000 0112356678889999999999999999884
No 18
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=5.7e-42 Score=360.78 Aligned_cols=267 Identities=27% Similarity=0.520 Sum_probs=224.6
Q ss_pred hccccccCeEEEEEEEEcCCceEEEEEeecccc-ChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccCCch
Q 005693 390 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVV-GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL 468 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~L 468 (682)
.+.||+|+||.||+|..++++.||+|++..... ..+.+.+|++++..+ +||||+++++++..++..++||||+++|+|
T Consensus 44 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 122 (321)
T 2qkw_B 44 KFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC-RHPHLVSLIGFCDERNEMILIYKYMENGNL 122 (321)
T ss_dssp CCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSC-CCTTBCCEEEECCCTTCCEEEEECCTTCBT
T ss_pred cceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhC-CCCCEeeEEEEEcCCCeEEEEEEcCCCCcH
Confidence 467999999999999988899999999876533 346788999999988 899999999999999999999999999999
Q ss_pred hHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCCC-----
Q 005693 469 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA----- 543 (682)
Q Consensus 469 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~----- 543 (682)
.+++..... ....+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 123 ~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 198 (321)
T 2qkw_B 123 KRHLYGSDL-PTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLS 198 (321)
T ss_dssp GGGSSSSCC-CSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCCCCB
T ss_pred HHHHhccCC-CccccCHHHHHHHHHHHHHHHHHhcCCC---eecCCCCHHHEEECCCCCEEEeecccccccccccccccc
Confidence 999975432 2345899999999999999999999998 9999999999999999999999999987543221
Q ss_pred -CCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhccccC
Q 005693 544 -TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQN 622 (682)
Q Consensus 544 -~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~ 622 (682)
...+++.|+|||++.+..++.++||||||+++|||++|+.||......+......|..............++.... ..
T Consensus 199 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 277 (321)
T 2qkw_B 199 TVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLAD-KI 277 (321)
T ss_dssp CCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTT-CS
T ss_pred cccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhcc-cc
Confidence 2236788999999998899999999999999999999999999877777777777766555444444444443322 23
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcC
Q 005693 623 IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 662 (682)
Q Consensus 623 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~~ 662 (682)
..+....+.+++.+||+.||++|||++|++++|+.+.+..
T Consensus 278 ~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~~ 317 (321)
T 2qkw_B 278 RPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQ 317 (321)
T ss_dssp CHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred CHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhcc
Confidence 3567788999999999999999999999999999988654
No 19
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=2e-42 Score=388.41 Aligned_cols=242 Identities=18% Similarity=0.260 Sum_probs=191.2
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeecccc----ChhhHHHHHHHHHHhc--CCCceeceEEEEEecCceEEEEee
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV----GKRDFEQQMEIVGRVG--QHPNVVPLRAYYYSKDEKLLVYDY 462 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~----~~~~~~~e~~~l~~l~--~h~niv~l~~~~~~~~~~~lV~e~ 462 (682)
.+.||+|+||+||+|+.. +++.||+|++++... ......+|..++..+. +|||||++++++++++..|+||||
T Consensus 194 ~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~lylVmEy 273 (689)
T 3v5w_A 194 HRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDL 273 (689)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEEECC
T ss_pred EEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEEEEEec
Confidence 478999999999999976 478899999975432 2333445544444332 799999999999999999999999
Q ss_pred ccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCC
Q 005693 463 FASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP 542 (682)
Q Consensus 463 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~ 542 (682)
++||+|.+++... ..+++..+..++.||+.||+|||+++ ||||||||+||||+.+|.+||+|||+|+.....
T Consensus 274 ~~GGdL~~~l~~~-----~~l~E~~a~~y~~qIl~aL~yLH~~g---IiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~ 345 (689)
T 3v5w_A 274 MNGGDLHYHLSQH-----GVFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKK 345 (689)
T ss_dssp CCSCBHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTTSCEEECCCTTCEECSSC
T ss_pred CCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchHHeEEeCCCCEEecccceeeecCCC
Confidence 9999999999743 24999999999999999999999998 999999999999999999999999999876443
Q ss_pred --CCCCCCCcccCcccccc-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhcc
Q 005693 543 --ATPSRSAGYRAPEVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMR 619 (682)
Q Consensus 543 --~~~~~~~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 619 (682)
.+.+||+.|||||++.. ..|+.++||||+||++|||++|+.||.+....+ ............. ..
T Consensus 346 ~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~---~~~i~~~i~~~~~---------~~ 413 (689)
T 3v5w_A 346 KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD---KHEIDRMTLTMAV---------EL 413 (689)
T ss_dssp CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCC---HHHHHHHHHHCCC---------CC
T ss_pred CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH---HHHHHHhhcCCCC---------CC
Confidence 35679999999999975 579999999999999999999999997644322 1111222111110 11
Q ss_pred ccChHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHHH
Q 005693 620 FQNIEEEMVQMLQIGMACVAKVPDMRPN-----MDEVVRM 654 (682)
Q Consensus 620 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt-----~~evl~~ 654 (682)
...++. .+.+++.+||+.||++|++ ++|+.++
T Consensus 414 p~~~S~---~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~H 450 (689)
T 3v5w_A 414 PDSFSP---ELRSLLEGLLQRDVNRRLGCLGRGAQEVKES 450 (689)
T ss_dssp CTTSCH---HHHHHHHHHTCSCGGGCTTCSSSTHHHHTTS
T ss_pred CccCCH---HHHHHHHHHccCCHhHCCCCCCCCHHHHhcC
Confidence 122233 4556777999999999998 7888774
No 20
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=4e-42 Score=388.03 Aligned_cols=243 Identities=20% Similarity=0.387 Sum_probs=199.0
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeecccc-ChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccCCc
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV-GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGS 467 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~ 467 (682)
.+.||+|+||+||+|..+ +++.||+|++..... ..+.+.+|+++++.+ +|||||++++++.+++..|+|||||++|+
T Consensus 162 ~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~~iv~E~~~gg~ 240 (573)
T 3uto_A 162 HEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVL-RHPTLVNLHDAFEDDNEMVMIYEFMSGGE 240 (573)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHT-CCTTBCCEEEEEECSSEEEEEEECCCCCB
T ss_pred EEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhC-CCCCCCeEEEEEEECCEEEEEEeecCCCc
Confidence 578999999999999975 478899999876533 356788999999999 99999999999999999999999999999
Q ss_pred hhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCC--CCeEEeecCCCCCCCCCC--
Q 005693 468 LSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQD--LDGCISDFGLTPLMNVPA-- 543 (682)
Q Consensus 468 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~--~~~kl~DfGla~~~~~~~-- 543 (682)
|.+++.... ..+++.++..++.||+.||+|||+++ |+||||||+|||++.+ +.+||+|||+|+......
T Consensus 241 L~~~i~~~~----~~l~e~~~~~~~~qi~~al~ylH~~~---iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~~ 313 (573)
T 3uto_A 241 LFEKVADEH----NKMSEDEAVEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSV 313 (573)
T ss_dssp HHHHHTCTT----SCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSEE
T ss_pred HHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCChhhccccCCCCCCEEEeeccceeEccCCCce
Confidence 999996432 34899999999999999999999998 9999999999999854 899999999998775443
Q ss_pred -CCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhccccC
Q 005693 544 -TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQN 622 (682)
Q Consensus 544 -~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~ 622 (682)
...||+.|||||++.+..|+.++||||+||++|||++|+.||.+.... .....+....+.. . ......
T Consensus 314 ~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~------~~~~~i~~~~~~~---~--~~~~~~ 382 (573)
T 3uto_A 314 KVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDD------ETLRNVKSCDWNM---D--DSAFSG 382 (573)
T ss_dssp EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH------HHHHHHHTTCCCC---C--SGGGTT
T ss_pred eeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH------HHHHHHHhCCCCC---C--cccccC
Confidence 346899999999999999999999999999999999999999865422 1122222221110 0 011122
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 623 IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 623 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
++ ..+.+++.+||+.||++|||++|++++
T Consensus 383 ~s---~~~~dli~~~L~~dp~~R~t~~e~l~H 411 (573)
T 3uto_A 383 IS---EDGKDFIRKLLLADPNTRMTIHQALEH 411 (573)
T ss_dssp SC---HHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred CC---HHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 23 345567779999999999999999874
No 21
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=4.3e-42 Score=362.01 Aligned_cols=257 Identities=24% Similarity=0.348 Sum_probs=202.9
Q ss_pred hccccccCeEEEEEEEEcCCceEEEEEeeccccChhhHHHHHHHHHHhcCCCceeceEEEEEecCc----eEEEEeeccC
Q 005693 390 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDE----KLLVYDYFAS 465 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~----~~lV~e~~~~ 465 (682)
.+.||+|+||+||+|+.. ++.||||++.........+++|+.++.++ +||||+++++++..... .++||||+++
T Consensus 29 ~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~ 106 (322)
T 3soc_A 29 LEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDKQSWQNEYEVYSLPGM-KHENILQFIGAEKRGTSVDVDLWLITAFHEK 106 (322)
T ss_dssp EEEEECSTTCEEEEEEET-TEEEEEEEECGGGHHHHHHHHHHHTSTTC-CCTTBCCEEEEEEEECSSSEEEEEEEECCTT
T ss_pred hheecccCceEEEEEEEC-CCEEEEEEeecCchHHHHHHHHHHHHhcC-CCCCchhhcceeccCCCCCceEEEEEecCCC
Confidence 478999999999999876 78999999976544445566788888888 89999999999987554 6999999999
Q ss_pred CchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc----------CCCCcEecCCCCCCeEecCCCCeEEeecCC
Q 005693 466 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSM----------GGPKFTHGNIKASNVLINQDLDGCISDFGL 535 (682)
Q Consensus 466 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~----------~~~~ivHrDLk~~NILl~~~~~~kl~DfGl 535 (682)
|+|.++++.. .+++..+..++.|++.||+|||+. + |+||||||+|||++.++.+||+|||+
T Consensus 107 g~L~~~l~~~------~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~---ivH~Dlkp~Nill~~~~~~kL~DFg~ 177 (322)
T 3soc_A 107 GSLSDFLKAN------VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPA---ISHRDIKSKNVLLKNNLTACIADFGL 177 (322)
T ss_dssp CBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECE---EECSCCSGGGEEECTTCCEEECCCTT
T ss_pred CCHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCC---EEeCCCChHhEEECCCCeEEEccCCc
Confidence 9999999743 389999999999999999999998 7 99999999999999999999999999
Q ss_pred CCCCCCC------CCCCCCCcccCccccccC-----CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhH------
Q 005693 536 TPLMNVP------ATPSRSAGYRAPEVIETR-----KHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPR------ 598 (682)
Q Consensus 536 a~~~~~~------~~~~~~~~y~aPE~~~~~-----~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~------ 598 (682)
++..... ....+|+.|+|||++.+. .++.++|||||||++|||+||+.||.+...........
T Consensus 178 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~ 257 (322)
T 3soc_A 178 ALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHP 257 (322)
T ss_dssp CEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSC
T ss_pred ccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCC
Confidence 9654332 224578999999999863 45678899999999999999999998765443332211
Q ss_pred ----HHHHHhhhccccccchhhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcC
Q 005693 599 ----WVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 662 (682)
Q Consensus 599 ----~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~~ 662 (682)
+......... .+.+............+.+++.+||+.||++|||++|+++.|+++.+..
T Consensus 258 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~~ 320 (322)
T 3soc_A 258 SLEDMQEVVVHKKK-----RPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRLT 320 (322)
T ss_dssp CHHHHHHHHTTSCC-----CCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred chhhhhhhhhcccC-----CCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 1111111111 1111111112245566888999999999999999999999999998653
No 22
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=7.9e-42 Score=360.37 Aligned_cols=278 Identities=38% Similarity=0.681 Sum_probs=224.1
Q ss_pred CCCHHHHHHHh-----hccccccCeEEEEEEEEcCCceEEEEEeecccc--ChhhHHHHHHHHHHhcCCCceeceEEEEE
Q 005693 379 NFDLEDLLRAS-----AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYY 451 (682)
Q Consensus 379 ~~~~~~l~~~~-----~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~ 451 (682)
.|+..++.... .+.||+|+||.||+|...+++.||+|++..... ....+.+|++++..+ +||||+++++++.
T Consensus 19 ~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~ 97 (326)
T 3uim_A 19 RFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMA-VHRNLLRLRGFCM 97 (326)
T ss_dssp ECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTC-CCTTBCCCCEEEC
T ss_pred eecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhc-cCCCccceEEEEe
Confidence 35555554443 468999999999999988899999999976532 234689999999998 8999999999999
Q ss_pred ecCceEEEEeeccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEe
Q 005693 452 SKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCIS 531 (682)
Q Consensus 452 ~~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~ 531 (682)
..+..++||||+++|+|.+++..... ....+++..+..++.|++.||+|||+...++|+||||||+||++++++.+||+
T Consensus 98 ~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~ 176 (326)
T 3uim_A 98 TPTERLLVYPYMANGSVASCLRERPE-SQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVG 176 (326)
T ss_dssp CSSCCEEEEECCTTCBHHHHHHCCST-TCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEEC
T ss_pred cCCceEEEEEeccCCCHHHHHHhccc-cCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEec
Confidence 99999999999999999999986543 34459999999999999999999999822239999999999999999999999
Q ss_pred ecCCCCCCCCCC-----CCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCC--CCCCCChhHHHHHHh
Q 005693 532 DFGLTPLMNVPA-----TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPT--RDDMVDLPRWVQSVV 604 (682)
Q Consensus 532 DfGla~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~--~~~~~~l~~~~~~~~ 604 (682)
|||+++...... ...+|+.|+|||++.+..++.++||||||+++|||++|+.||.... .........|.....
T Consensus 177 Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 256 (326)
T 3uim_A 177 DFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLL 256 (326)
T ss_dssp CCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTT
T ss_pred cCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHh
Confidence 999997654322 2347899999999998889999999999999999999999996321 122334555665555
Q ss_pred hhccccccchhhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhh
Q 005693 605 REEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVR 659 (682)
Q Consensus 605 ~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~ 659 (682)
.........+.... .....+....+.+++.+||+.||++|||++|++++|+...
T Consensus 257 ~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~ 310 (326)
T 3uim_A 257 KEKKLEALVDVDLQ-GNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDG 310 (326)
T ss_dssp SSCCSTTSSCTTCT-TSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSS
T ss_pred hchhhhhhcChhhc-cccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcc
Confidence 55544444444432 2334677888999999999999999999999999998643
No 23
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=5.1e-41 Score=351.70 Aligned_cols=253 Identities=28% Similarity=0.425 Sum_probs=196.3
Q ss_pred hccccccCeEEEEEEEEcCCceEEEEEeeccccC---hhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccCC
Q 005693 390 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 466 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g 466 (682)
.+.||+|+||+||+|+. +++.||+|++...... .+++.+|++++.++ +||||+++++++.+.+..++||||+++|
T Consensus 42 ~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~~~ 119 (309)
T 3p86_A 42 KEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRL-RHPNIVLFMGAVTQPPNLSIVTEYLSRG 119 (309)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHC-CCTTBCCEEEEECSTTCCEEEEECCTTC
T ss_pred eeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEECCceEEEEecCCCC
Confidence 57899999999999987 4788999999765433 24688899999999 8999999999999999999999999999
Q ss_pred chhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCC----
Q 005693 467 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP---- 542 (682)
Q Consensus 467 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~---- 542 (682)
+|.+++..... ...+++..+..++.|++.||+|||+.+ ++|+||||||+||+++.++.+||+|||+++.....
T Consensus 120 ~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~-~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~ 196 (309)
T 3p86_A 120 SLYRLLHKSGA--REQLDERRRLSMAYDVAKGMNYLHNRN-PPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSS 196 (309)
T ss_dssp BHHHHHHSTTH--HHHSCHHHHHHHHHHHHHHHHHHHTSS-SCCCCTTCCGGGEEECTTCCEEECCCC------------
T ss_pred cHHHHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHHcCC-CCEECCCCChhhEEEeCCCcEEECCCCCCcccccccccc
Confidence 99999975321 223899999999999999999999985 45999999999999999999999999999765433
Q ss_pred CCCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhccccC
Q 005693 543 ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQN 622 (682)
Q Consensus 543 ~~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~ 622 (682)
....+|+.|+|||++.+..++.++||||||+++|||++|+.||...... ............. ..
T Consensus 197 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~------~~~~~~~~~~~~~----------~~ 260 (309)
T 3p86_A 197 KSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPA------QVVAAVGFKCKRL----------EI 260 (309)
T ss_dssp -----CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHH------HHHHHHHHSCCCC----------CC
T ss_pred ccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHhcCCCC----------CC
Confidence 2345789999999999999999999999999999999999999754321 1111111111000 00
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCC
Q 005693 623 IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 663 (682)
Q Consensus 623 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~~~ 663 (682)
.......+.+++.+||+.||++|||++|+++.|+.+.+...
T Consensus 261 ~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~ 301 (309)
T 3p86_A 261 PRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAV 301 (309)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC---
T ss_pred CccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhCC
Confidence 11223456778889999999999999999999999987654
No 24
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.3e-40 Score=348.52 Aligned_cols=248 Identities=25% Similarity=0.436 Sum_probs=203.4
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeeccc-cChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccCCc
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV-VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGS 467 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~ 467 (682)
.+.||+|+||+||+|... +++.||+|++.... ...+.+.+|++++.++ +||||+++++++.+++..++||||+++|+
T Consensus 15 ~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~~~~ 93 (310)
T 3s95_A 15 GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCL-EHPNVLKFIGVLYKDKRLNFITEYIKGGT 93 (310)
T ss_dssp EEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEEEEEECCTTCB
T ss_pred cceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhC-CCcCcccEEEEEecCCeeEEEEEecCCCc
Confidence 578999999999999975 47889999885532 2346788999999999 89999999999999999999999999999
Q ss_pred hhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCCC----
Q 005693 468 LSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA---- 543 (682)
Q Consensus 468 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~---- 543 (682)
|.+++.... ..+++.++..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 94 L~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 166 (310)
T 3s95_A 94 LRGIIKSMD----SQYPWSQRVSFAKDIASGMAYLHSMN---IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPE 166 (310)
T ss_dssp HHHHHHHCC----TTSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEECTTSCEEECCCTTCEECC-------
T ss_pred HHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCcCeEEECCCCCEEEeecccceeccccccccc
Confidence 999997532 34899999999999999999999998 9999999999999999999999999997653321
Q ss_pred --------------CCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCC---ChhHHHHHHhhh
Q 005693 544 --------------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMV---DLPRWVQSVVRE 606 (682)
Q Consensus 544 --------------~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~---~l~~~~~~~~~~ 606 (682)
...||+.|+|||++.+..++.++||||||+++|||++|..||......... ..........
T Consensus 167 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-- 244 (310)
T 3s95_A 167 GLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYC-- 244 (310)
T ss_dssp -------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHHTC--
T ss_pred ccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccccccC--
Confidence 335788999999999999999999999999999999999998754332221 1111111000
Q ss_pred ccccccchhhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCC
Q 005693 607 EWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 663 (682)
Q Consensus 607 ~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~~~ 663 (682)
.......+.+++.+||+.||++|||++|+++.|+++.....
T Consensus 245 ----------------~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~~ 285 (310)
T 3s95_A 245 ----------------PPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLA 285 (310)
T ss_dssp ----------------CTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred ----------------CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhcc
Confidence 01122346678889999999999999999999999986644
No 25
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=2.2e-40 Score=339.51 Aligned_cols=247 Identities=25% Similarity=0.437 Sum_probs=206.8
Q ss_pred hccccccCeEEEEEEEEcCCceEEEEEeeccccChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccCCchh
Q 005693 390 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLS 469 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~L~ 469 (682)
.+.||+|+||.||+|...+++.||+|++.......+++.+|++++.++ +||||+++++++.+++..++||||+++|+|.
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 93 (269)
T 4hcu_A 15 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKL-SHPKLVQLYGVCLEQAPICLVFEFMEHGCLS 93 (269)
T ss_dssp EEEEEECSSCEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTC-CCTTBCCEEEEECSSSSEEEEEECCTTCBHH
T ss_pred eheecCCCccEEEEEEecCCCeEEEEEecccccCHHHHHHHHHHHHhC-CCCCEeeEEEEEecCCceEEEEEeCCCCcHH
Confidence 478999999999999998889999999988777778899999999999 8999999999999999999999999999999
Q ss_pred HhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCC-----CC
Q 005693 470 TLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP-----AT 544 (682)
Q Consensus 470 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~-----~~ 544 (682)
+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++..... ..
T Consensus 94 ~~l~~~~----~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 166 (269)
T 4hcu_A 94 DYLRTQR----GLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 166 (269)
T ss_dssp HHHHTTT----TCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTS
T ss_pred HHHHhcC----cccCHHHHHHHHHHHHHHHHHHHhCC---eecCCcchheEEEcCCCCEEeccccccccccccccccccC
Confidence 9997533 34899999999999999999999998 999999999999999999999999999765432 23
Q ss_pred CCCCCcccCccccccCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhccccCh
Q 005693 545 PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNI 623 (682)
Q Consensus 545 ~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-g~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~ 623 (682)
..+++.|+|||++.+..++.++||||+|+++|||++ |+.||...... ......... ... . ..
T Consensus 167 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~------~~~~~~~~~-~~~--~-----~~--- 229 (269)
T 4hcu_A 167 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS------EVVEDISTG-FRL--Y-----KP--- 229 (269)
T ss_dssp TTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH------HHHHHHHTT-CCC--C-----CC---
T ss_pred cccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHH------HHHHHHhcC-ccC--C-----CC---
Confidence 345678999999998999999999999999999999 99999754321 111111111 000 0 01
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 005693 624 EEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQS 661 (682)
Q Consensus 624 ~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~ 661 (682)
......+.+++.+||+.||++|||++|++++|+++.+.
T Consensus 230 ~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 230 RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 11234567788899999999999999999999999864
No 26
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=9.7e-41 Score=358.55 Aligned_cols=254 Identities=25% Similarity=0.408 Sum_probs=204.3
Q ss_pred hccccccCeEEEEEEEEc--------CCceEEEEEeecccc--ChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEE
Q 005693 390 AEVLGKGSYGTAYKAVLE--------ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLV 459 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~--------~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV 459 (682)
.+.||+|+||.||+|+.. ++..||+|+++.... ..+++.+|++++.++.+||||+++++++.+++..++|
T Consensus 86 ~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv 165 (370)
T 2psq_A 86 GKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVI 165 (370)
T ss_dssp EEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSSSCEEE
T ss_pred eeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCCCEEEE
Confidence 578999999999999863 245699999976432 2356889999999997899999999999999999999
Q ss_pred EeeccCCchhHhhccCCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCe
Q 005693 460 YDYFASGSLSTLLHGNRGA-----------GRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDG 528 (682)
Q Consensus 460 ~e~~~~g~L~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~ 528 (682)
|||+++|+|.+++...... ....+++.+++.++.||+.||+|||+++ |+||||||+|||++.++.+
T Consensus 166 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~ 242 (370)
T 2psq_A 166 VEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVM 242 (370)
T ss_dssp EECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCE
T ss_pred EEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---eeccccchhhEEECCCCCE
Confidence 9999999999999764321 1234899999999999999999999998 9999999999999999999
Q ss_pred EEeecCCCCCCCCCC------CCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHH
Q 005693 529 CISDFGLTPLMNVPA------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQ 601 (682)
Q Consensus 529 kl~DfGla~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-g~~Pf~~~~~~~~~~l~~~~~ 601 (682)
||+|||+++...... ...+++.|+|||++.+..++.++|||||||++|||+| |+.||.+....+. ..
T Consensus 243 kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~------~~ 316 (370)
T 2psq_A 243 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL------FK 316 (370)
T ss_dssp EECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH------HH
T ss_pred EEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHH------HH
Confidence 999999997654322 2234678999999999999999999999999999999 9999986543221 11
Q ss_pred HHhhhccccccchhhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCC
Q 005693 602 SVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 663 (682)
Q Consensus 602 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~~~ 663 (682)
. +....... ........+.+++.+||+.||++|||++|+++.|+.+.....
T Consensus 317 ~-~~~~~~~~----------~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~~~ 367 (370)
T 2psq_A 317 L-LKEGHRMD----------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 367 (370)
T ss_dssp H-HHTTCCCC----------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred H-HhcCCCCC----------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHhc
Confidence 1 11111100 111233456778889999999999999999999999986544
No 27
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=2.1e-40 Score=345.11 Aligned_cols=240 Identities=22% Similarity=0.344 Sum_probs=197.0
Q ss_pred hccccccCeEEEEEEEE-cCCceEEEEEeecccc-ChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccCCc
Q 005693 390 AEVLGKGSYGTAYKAVL-EESTTVVVKRLKEVVV-GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGS 467 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~ 467 (682)
.+.||+|+||+||+|.. .+++.||+|++..... ..+.+.+|+.++..+ +||||+++++++..++..++||||+++|+
T Consensus 25 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~~~~ 103 (297)
T 3fxz_A 25 FEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMREN-KNPNIVNYLDSYLVGDELWVVMEYLAGGS 103 (297)
T ss_dssp CEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEECCTTCB
T ss_pred eeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcC-CCCCCCeEeEEEEECCEEEEEEECCCCCC
Confidence 46799999999999996 4578899999875543 456788999999998 99999999999999999999999999999
Q ss_pred hhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCC----C
Q 005693 468 LSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP----A 543 (682)
Q Consensus 468 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~----~ 543 (682)
|.+++... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++...... .
T Consensus 104 L~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 174 (297)
T 3fxz_A 104 LTDVVTET------CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS 174 (297)
T ss_dssp HHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBC
T ss_pred HHHHHhhc------CCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccccC
Confidence 99999743 3899999999999999999999998 999999999999999999999999998765432 2
Q ss_pred CCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhccccCh
Q 005693 544 TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNI 623 (682)
Q Consensus 544 ~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~ 623 (682)
...+|+.|+|||++.+..++.++|||||||++|||++|+.||...... ............ .....
T Consensus 175 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~------~~~~~~~~~~~~---------~~~~~ 239 (297)
T 3fxz_A 175 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL------RALYLIATNGTP---------ELQNP 239 (297)
T ss_dssp CCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH------HHHHHHHHHCSC---------CCSCG
T ss_pred CccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHhCCCC---------CCCCc
Confidence 345789999999999999999999999999999999999999754311 111111111110 01111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 624 EEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 624 ~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
......+.+++.+||+.||++|||++|++++
T Consensus 240 ~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 270 (297)
T 3fxz_A 240 EKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 270 (297)
T ss_dssp GGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred cccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 2233456778889999999999999999874
No 28
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=2.8e-40 Score=338.35 Aligned_cols=248 Identities=27% Similarity=0.427 Sum_probs=205.1
Q ss_pred hccccccCeEEEEEEEEcCCceEEEEEeeccccChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccCCchh
Q 005693 390 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLS 469 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~L~ 469 (682)
.+.||+|+||.||+|..+++..||+|+++......+++.+|++++.++ +||||+++++++.+++..++||||+++|+|.
T Consensus 13 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 91 (268)
T 3sxs_A 13 LKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKL-SHPKLVKFYGVCSKEYPIYIVTEYISNGCLL 91 (268)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEECBTTBCHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSEEEEEECCTTCBHH
T ss_pred eeeeccCCCceEEEEEecCceeEEEEEeccCCCcHHHHHHHHHHHHhC-CCCCEeeEEEEEccCCceEEEEEccCCCcHH
Confidence 468999999999999999888999999987777778899999999999 8999999999999999999999999999999
Q ss_pred HhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCCC-----C
Q 005693 470 TLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA-----T 544 (682)
Q Consensus 470 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~-----~ 544 (682)
+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++....... .
T Consensus 92 ~~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~ 164 (268)
T 3sxs_A 92 NYLRSHG----KGLEPSQLLEMCYDVCEGMAFLESHQ---FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVG 164 (268)
T ss_dssp HHHHHHG----GGCCHHHHHHHHHHHHHHHHHHHHTT---EEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEECCS
T ss_pred HHHHHcC----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCcCcceEEECCCCCEEEccCccceecchhhhhcccC
Confidence 9997532 24899999999999999999999998 9999999999999999999999999997654332 2
Q ss_pred CCCCCcccCccccccCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhccccCh
Q 005693 545 PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNI 623 (682)
Q Consensus 545 ~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-g~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~ 623 (682)
..+++.|+|||.+.+..++.++||||||+++|||++ |+.||...... ........... .. ...
T Consensus 165 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~------~~~~~~~~~~~---~~-----~~~-- 228 (268)
T 3sxs_A 165 TKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNS------EVVLKVSQGHR---LY-----RPH-- 228 (268)
T ss_dssp CCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHH------HHHHHHHTTCC---CC-----CCT--
T ss_pred CCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChH------HHHHHHHcCCC---CC-----CCC--
Confidence 335667999999998889999999999999999999 99999754321 11111111110 00 011
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcC
Q 005693 624 EEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 662 (682)
Q Consensus 624 ~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~~ 662 (682)
.....+.+++.+||+.||++|||++|+++.|+.+.+..
T Consensus 229 -~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~~ 266 (268)
T 3sxs_A 229 -LASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREKD 266 (268)
T ss_dssp -TSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC--
T ss_pred -cChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhcc
Confidence 11235677888999999999999999999999987654
No 29
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=2.4e-40 Score=349.13 Aligned_cols=252 Identities=27% Similarity=0.454 Sum_probs=201.8
Q ss_pred hccccccCeEEEEEEEEc----CCceEEEEEeecccc--ChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeec
Q 005693 390 AEVLGKGSYGTAYKAVLE----ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYF 463 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~----~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~ 463 (682)
.+.||+|+||.||+|.+. .+..||||+++.... ..+.+.+|++++.++ +||||+++++++.+++..++||||+
T Consensus 54 ~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~ 132 (325)
T 3kul_A 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQF-DHPNIIRLEGVVTRGRLAMIVTEYM 132 (325)
T ss_dssp EEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECGGGCCEEEEECC
T ss_pred eeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEeCCccEEEeeCC
Confidence 578999999999999975 344699999976432 245788999999999 8999999999999999999999999
Q ss_pred cCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCCC
Q 005693 464 ASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA 543 (682)
Q Consensus 464 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~ 543 (682)
++|+|.++++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 133 ~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 205 (325)
T 3kul_A 133 ENGSLDTFLRTHD----GQFTIMQLVGMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDP 205 (325)
T ss_dssp TTCBHHHHHHTTT----TCSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCSSCEECC---
T ss_pred CCCcHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEECCCCCEEECCCCcccccccCc
Confidence 9999999997432 34899999999999999999999998 9999999999999999999999999998764332
Q ss_pred C-------CCCCCcccCccccccCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchh
Q 005693 544 T-------PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDV 615 (682)
Q Consensus 544 ~-------~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-g~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 615 (682)
. ..+++.|+|||++.+..++.++||||||+++|||++ |..||...... ......... ..
T Consensus 206 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~------~~~~~~~~~-~~------ 272 (325)
T 3kul_A 206 DAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR------DVISSVEEG-YR------ 272 (325)
T ss_dssp -CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHH------HHHHHHHTT-CC------
T ss_pred cceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHH------HHHHHHHcC-CC------
Confidence 1 224567999999998899999999999999999999 99999754321 111111111 10
Q ss_pred hhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCCCCC
Q 005693 616 ELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSENR 666 (682)
Q Consensus 616 ~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~~~~~~ 666 (682)
..........+.+++.+||+.||++|||++|+++.|+.+.+.....+
T Consensus 273 ----~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~~~~ 319 (325)
T 3kul_A 273 ----LPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPESLR 319 (325)
T ss_dssp ----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC---
T ss_pred ----CCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCccccc
Confidence 00111233456778889999999999999999999999997766543
No 30
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=4.9e-40 Score=339.37 Aligned_cols=248 Identities=22% Similarity=0.357 Sum_probs=204.0
Q ss_pred hccccccCeEEEEEEEEcCCceEEEEEeeccccChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccCCchh
Q 005693 390 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLS 469 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~L~ 469 (682)
.+.||+|+||.||++...++..||+|+++......+++.+|++++.++ +||||+++++++.+++..++||||+++|+|.
T Consensus 29 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 107 (283)
T 3gen_A 29 LKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNL-SHEKLVQLYGVCTKQRPIFIITEYMANGCLL 107 (283)
T ss_dssp EEECC---CEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTC-CCTTBCCEEEEECSSSSEEEEECCCTTCBHH
T ss_pred HhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCCHHHHHHHHHHHhcC-CCCCEeeEEEEEecCCCeEEEEeccCCCcHH
Confidence 478999999999999999888999999988777778899999999999 8999999999999999999999999999999
Q ss_pred HhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCC-----CC
Q 005693 470 TLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP-----AT 544 (682)
Q Consensus 470 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~-----~~ 544 (682)
+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++...... ..
T Consensus 108 ~~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 180 (283)
T 3gen_A 108 NYLREMR----HRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG 180 (283)
T ss_dssp HHHHCGG----GCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHSTTS
T ss_pred HHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCccceEEEcCCCCEEEccccccccccccccccccC
Confidence 9997532 24899999999999999999999998 999999999999999999999999999765432 23
Q ss_pred CCCCCcccCccccccCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhccccCh
Q 005693 545 PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNI 623 (682)
Q Consensus 545 ~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-g~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~ 623 (682)
..+++.|+|||++.+..++.++||||||+++|||+| |+.||...... .....+.... .. . ..
T Consensus 181 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~------~~~~~~~~~~-~~--~-----~~--- 243 (283)
T 3gen_A 181 SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS------ETAEHIAQGL-RL--Y-----RP--- 243 (283)
T ss_dssp TTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH------HHHHHHHTTC-CC--C-----CC---
T ss_pred CccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh------HHHHHHhccc-CC--C-----CC---
Confidence 345678999999998899999999999999999998 99999754321 1111111110 00 0 00
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcC
Q 005693 624 EEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 662 (682)
Q Consensus 624 ~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~~ 662 (682)
......+.+++.+||+.+|++|||++|++++|+++...+
T Consensus 244 ~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~e 282 (283)
T 3gen_A 244 HLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDEE 282 (283)
T ss_dssp TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred CcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhcc
Confidence 111245677888999999999999999999999988654
No 31
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=9.1e-40 Score=345.41 Aligned_cols=253 Identities=15% Similarity=0.176 Sum_probs=204.0
Q ss_pred hccccccCeEEEEEEEE-cCCceEEEEEeeccccChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccCCch
Q 005693 390 AEVLGKGSYGTAYKAVL-EESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL 468 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~L 468 (682)
.+.||+|+||.||+|.. .+++.||+|++.... ..+.+.+|++++.++.+||||+++++++..++..++||||+ +|+|
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~L 91 (330)
T 2izr_A 14 GKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS-RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL-GPSL 91 (330)
T ss_dssp EEECCC-CTTSEEEEEETTTTEEEEEEEEETTC-SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC-CCBH
T ss_pred EEEeeccCCceEEEEEECCCCcEEEEEEecccc-chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC-CCCH
Confidence 47899999999999996 457889999987543 34578999999999989999999999999999999999999 9999
Q ss_pred hHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCC-----eEEeecCCCCCCCCC-
Q 005693 469 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLD-----GCISDFGLTPLMNVP- 542 (682)
Q Consensus 469 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~-----~kl~DfGla~~~~~~- 542 (682)
.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++. +||+|||+++.....
T Consensus 92 ~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~LH~~~---iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~ 164 (330)
T 2izr_A 92 EDLFDLCD----RTFSLKTVLMIAIQLISRMEYVHSKN---LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPE 164 (330)
T ss_dssp HHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTT
T ss_pred HHHHHHcC----CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCC
Confidence 99997542 34999999999999999999999998 999999999999999887 999999999765322
Q ss_pred ----------CCCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcccccc
Q 005693 543 ----------ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEV 612 (682)
Q Consensus 543 ----------~~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~ 612 (682)
....||+.|+|||++.+..++.++|||||||++|||++|+.||.+....+. ......+........
T Consensus 165 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~---~~~~~~i~~~~~~~~- 240 (330)
T 2izr_A 165 TKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTL---KERYQKIGDTKRATP- 240 (330)
T ss_dssp TCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSH---HHHHHHHHHHHHHSC-
T ss_pred CCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccH---HHHHHHHHhhhccCC-
Confidence 234578999999999999999999999999999999999999987643332 222222211111000
Q ss_pred chhhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcC
Q 005693 613 FDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 662 (682)
Q Consensus 613 ~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~~ 662 (682)
.+ . ..... . .+.+++.+||+.||++||+++++.+.|+++.+..
T Consensus 241 ~~-~--~~~~~---p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~ 283 (330)
T 2izr_A 241 IE-V--LCENF---P-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRK 283 (330)
T ss_dssp HH-H--HTTTC---H-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred HH-H--HhccC---h-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHc
Confidence 00 0 00011 1 6778888999999999999999999999887654
No 32
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=2.8e-39 Score=337.76 Aligned_cols=271 Identities=29% Similarity=0.528 Sum_probs=214.2
Q ss_pred CCCCHHHHHHHh-----------hccccccCeEEEEEEEEcCCceEEEEEeecccc-----ChhhHHHHHHHHHHhcCCC
Q 005693 378 YNFDLEDLLRAS-----------AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVV-----GKRDFEQQMEIVGRVGQHP 441 (682)
Q Consensus 378 ~~~~~~~l~~~~-----------~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~-----~~~~~~~e~~~l~~l~~h~ 441 (682)
..|+.+++...+ .+.||+|+||.||+|.. +++.||+|++..... ..+.+.+|++++.++ +||
T Consensus 13 ~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~ 90 (307)
T 2nru_A 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKC-QHE 90 (307)
T ss_dssp EECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHC-CCT
T ss_pred CcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhc-CCC
Confidence 346677776665 26799999999999986 578999999875421 245688999999999 899
Q ss_pred ceeceEEEEEecCceEEEEeeccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeE
Q 005693 442 NVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVL 521 (682)
Q Consensus 442 niv~l~~~~~~~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NIL 521 (682)
||+++++++.+.+..++||||+++|+|.+++..... ...+++..+..++.|++.||+|||+.+ |+||||||+||+
T Consensus 91 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp~Nil 165 (307)
T 2nru_A 91 NLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDG--TPPLSWHMRCKIAQGAANGINFLHENH---HIHRDIKSANIL 165 (307)
T ss_dssp TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGG--CCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEE
T ss_pred CeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccC--CCCCCHHHHHHHHHHHHHHHHHHhcCC---eecCCCCHHHEE
Confidence 999999999999999999999999999999975332 345899999999999999999999998 999999999999
Q ss_pred ecCCCCeEEeecCCCCCCCCC------CCCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCC
Q 005693 522 INQDLDGCISDFGLTPLMNVP------ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVD 595 (682)
Q Consensus 522 l~~~~~~kl~DfGla~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~ 595 (682)
+++++.+||+|||++...... ....+++.|+|||.+.+ .++.++||||||+++|||++|..||......+..
T Consensus 166 i~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~- 243 (307)
T 2nru_A 166 LDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLL- 243 (307)
T ss_dssp ECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBT-
T ss_pred EcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHH-
Confidence 999999999999998765432 23357889999998865 5889999999999999999999999865543322
Q ss_pred hhHHHHHHhhhc-cccccchhhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhh
Q 005693 596 LPRWVQSVVREE-WTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQ 660 (682)
Q Consensus 596 l~~~~~~~~~~~-~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~ 660 (682)
..+........ ...+.++..+ ..........+.+++.+||+.+|++|||++|++++|+++.+
T Consensus 244 -~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 244 -LDIKEEIEDEEKTIEDYIDKKM--NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp -THHHHHHHTTSCCHHHHSCSSC--SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred -HHHHHHhhhhhhhhhhhccccc--cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 22222221111 1111122111 12235566788899999999999999999999999999865
No 33
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=3.4e-40 Score=343.45 Aligned_cols=251 Identities=23% Similarity=0.402 Sum_probs=194.0
Q ss_pred hccccccCeEEEEEEEEcCCceEEEEEeeccccChhhHHHHHHHHHHh-cCCCceeceEEEEEec----CceEEEEeecc
Q 005693 390 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRV-GQHPNVVPLRAYYYSK----DEKLLVYDYFA 464 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l-~~h~niv~l~~~~~~~----~~~~lV~e~~~ 464 (682)
.+.||+|+||+||+|+. +++.||||++... ....+.+|.+++... .+||||+++++++... ...++||||++
T Consensus 13 ~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~--~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~ 89 (301)
T 3q4u_A 13 LECVGKGRYGEVWRGSW-QGENVAVKIFSSR--DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHE 89 (301)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEECGG--GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEECCCT
T ss_pred EEeeccCCCcEEEEEEE-CCEEEEEEEeccc--cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEehhhcc
Confidence 47899999999999998 5889999998653 245566777777763 2899999999997653 35789999999
Q ss_pred CCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHH--------hcCCCCcEecCCCCCCeEecCCCCeEEeecCCC
Q 005693 465 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIH--------SMGGPKFTHGNIKASNVLINQDLDGCISDFGLT 536 (682)
Q Consensus 465 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH--------~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla 536 (682)
+|+|.++++. ..+++..+..++.|++.||+||| +.+ |+||||||+|||++.++.+||+|||++
T Consensus 90 ~g~L~~~l~~------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~Nill~~~~~~kl~Dfg~a 160 (301)
T 3q4u_A 90 MGSLYDYLQL------TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA---IAHRDLKSKNILVKKNGQCCIADLGLA 160 (301)
T ss_dssp TCBHHHHHTT------CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCE---EECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred CCCHHHHHhh------cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC---eecCCCChHhEEEcCCCCEEEeeCCCe
Confidence 9999999963 24899999999999999999999 766 999999999999999999999999998
Q ss_pred CCCCCC--------CCCCCCCcccCccccccC------CCCCcchHHHHHHHHHHHHhC----------CCCCCCCCCCC
Q 005693 537 PLMNVP--------ATPSRSAGYRAPEVIETR------KHSHKSDVYSFGVLLLEMLTG----------KAPLQSPTRDD 592 (682)
Q Consensus 537 ~~~~~~--------~~~~~~~~y~aPE~~~~~------~~~~~sDvwS~Gvvl~elltg----------~~Pf~~~~~~~ 592 (682)
+..... ....+|+.|+|||++.+. .++.++|||||||++|||+|| +.||......+
T Consensus 161 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~ 240 (301)
T 3q4u_A 161 VMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPND 240 (301)
T ss_dssp EEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred eecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCC
Confidence 654332 223688999999999876 455789999999999999999 78886543322
Q ss_pred CCChhHHHHHHhhhccccccchhhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHh
Q 005693 593 MVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEV 658 (682)
Q Consensus 593 ~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i 658 (682)
. ... ............ +..............+.+++.+||+.||++|||++|+++.|+++
T Consensus 241 ~-~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 241 P-SFE-DMRKVVCVDQQR----PNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp C-CHH-HHHHHHTTSCCC----CCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred c-chh-hhhHHHhccCCC----CCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 2 111 111111111111 11111111234567788899999999999999999999999976
No 34
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=1.3e-39 Score=342.92 Aligned_cols=239 Identities=21% Similarity=0.303 Sum_probs=196.2
Q ss_pred ccccccCeEEEEEEEEc-CCceEEEEEeecccc-ChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccCCch
Q 005693 391 EVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV-GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL 468 (682)
Q Consensus 391 ~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~L 468 (682)
+.||+|+||.||+|+.. +++.||||++..... ..+.+.+|+.++.++ +||||+++++++...+..++||||+++|+|
T Consensus 51 ~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 129 (321)
T 2c30_A 51 VKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDY-QHFNVVEMYKSYLVGEELWVLMEFLQGGAL 129 (321)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEEEEECCCCSCBH
T ss_pred EEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhC-CCCCcceEEEEEEECCEEEEEEecCCCCCH
Confidence 47999999999999986 688999999975543 356788999999999 899999999999999999999999999999
Q ss_pred hHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCC----CC
Q 005693 469 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP----AT 544 (682)
Q Consensus 469 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~----~~ 544 (682)
.+++.. ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++...... ..
T Consensus 130 ~~~l~~------~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~ 200 (321)
T 2c30_A 130 TDIVSQ------VRLNEEQIATVCEAVLQALAYLHAQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKS 200 (321)
T ss_dssp HHHHTT------CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCC
T ss_pred HHHHHh------cCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCcEEEeeeeeeeecccCcccccc
Confidence 999863 23899999999999999999999998 999999999999999999999999998765432 23
Q ss_pred CCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhccccChH
Q 005693 545 PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIE 624 (682)
Q Consensus 545 ~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 624 (682)
..+|+.|+|||++.+..++.++||||||+++|||++|+.||..... ......... ..... ... ..
T Consensus 201 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~------~~~~~~~~~-~~~~~-----~~~---~~ 265 (321)
T 2c30_A 201 LVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSP------VQAMKRLRD-SPPPK-----LKN---SH 265 (321)
T ss_dssp CCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHHHHHH-SSCCC-----CTT---GG
T ss_pred ccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHhc-CCCCC-----cCc---cc
Confidence 4688999999999999999999999999999999999999975431 111111111 11100 001 11
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 625 EEMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 625 ~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
.....+.+++.+||+.||++|||++|++++
T Consensus 266 ~~~~~l~~li~~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 266 KVSPVLRDFLERMLVRDPQERATAQELLDH 295 (321)
T ss_dssp GSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred cCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 122346677889999999999999999885
No 35
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.3e-39 Score=351.32 Aligned_cols=260 Identities=25% Similarity=0.375 Sum_probs=207.5
Q ss_pred hccccccCeEEEEEEEEc--------CCceEEEEEeeccccC--hhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEE
Q 005693 390 AEVLGKGSYGTAYKAVLE--------ESTTVVVKRLKEVVVG--KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLV 459 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~--------~~~~vavK~l~~~~~~--~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV 459 (682)
.+.||+|+||+||+|+.. .+..||+|+++..... .+.+.+|++++.++.+||||+++++++..++..++|
T Consensus 74 ~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv 153 (382)
T 3tt0_A 74 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVI 153 (382)
T ss_dssp EEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred eeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCCceEEE
Confidence 578999999999999863 2356999999765332 356889999999998899999999999999999999
Q ss_pred EeeccCCchhHhhccCCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCe
Q 005693 460 YDYFASGSLSTLLHGNRGA-----------GRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDG 528 (682)
Q Consensus 460 ~e~~~~g~L~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~ 528 (682)
|||+++|+|.+++...... ....+++..++.++.|++.||+|||+.+ |+||||||+|||+++++.+
T Consensus 154 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~ 230 (382)
T 3tt0_A 154 VEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVM 230 (382)
T ss_dssp EECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCE
T ss_pred EEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCcceEEEcCCCcE
Confidence 9999999999999764321 1235899999999999999999999998 9999999999999999999
Q ss_pred EEeecCCCCCCCCCC------CCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHH
Q 005693 529 CISDFGLTPLMNVPA------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQ 601 (682)
Q Consensus 529 kl~DfGla~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-g~~Pf~~~~~~~~~~l~~~~~ 601 (682)
||+|||+++...... ...+++.|+|||++.+..++.++|||||||++|||++ |..||.+.... ....
T Consensus 231 kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~------~~~~ 304 (382)
T 3tt0_A 231 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE------ELFK 304 (382)
T ss_dssp EECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH------HHHH
T ss_pred EEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH------HHHH
Confidence 999999998664322 2235678999999999999999999999999999999 99999754321 1122
Q ss_pred HHhhhccccccchhhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCCCCCCCC
Q 005693 602 SVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSENRPSS 669 (682)
Q Consensus 602 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~~~~~~~~~ 669 (682)
.+ ....... .. ......+.+++.+||+.||++|||++|+++.|+++.+....++...
T Consensus 305 ~~-~~~~~~~-------~~---~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~~~~~ 361 (382)
T 3tt0_A 305 LL-KEGHRMD-------KP---SNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQEMGY 361 (382)
T ss_dssp HH-HTTCCCC-------CC---SSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCSCC---
T ss_pred HH-HcCCCCC-------CC---ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhcCCCCC
Confidence 11 1111110 01 1223456778889999999999999999999999998776655443
No 36
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=5.5e-40 Score=362.46 Aligned_cols=248 Identities=24% Similarity=0.437 Sum_probs=205.2
Q ss_pred hccccccCeEEEEEEEEcCCceEEEEEeeccccChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccCCchh
Q 005693 390 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLS 469 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~L~ 469 (682)
.+.||+|+||+||+|.++++..||||+++......+++.+|+++++++ +||||+++++++. .+..++||||+++|+|.
T Consensus 193 ~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~l~~~~~-~~~~~lv~e~~~~g~L~ 270 (454)
T 1qcf_A 193 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTL-QHDKLVKLHAVVT-KEPIYIITEFMAKGSLL 270 (454)
T ss_dssp EEEEECCSSEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHTTC-CCTTBCCEEEEEC-SSSCEEEECCCTTCBHH
T ss_pred EEEcccCCceEEEEEEECCccEEEEEEecCCCccHHHHHHHHHHHhhC-CCCCEeeEEEEEe-CCccEEEEeecCCCcHH
Confidence 578999999999999998889999999987666778899999999999 9999999999986 66789999999999999
Q ss_pred HhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCC-----CC
Q 005693 470 TLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP-----AT 544 (682)
Q Consensus 470 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~-----~~ 544 (682)
++++... ...+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++..... ..
T Consensus 271 ~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~ 344 (454)
T 1qcf_A 271 DFLKSDE---GSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREG 344 (454)
T ss_dssp HHHHSHH---HHTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTTCS
T ss_pred HHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceeccCC
Confidence 9997432 124789999999999999999999998 999999999999999999999999999876432 22
Q ss_pred CCCCCcccCccccccCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhccccCh
Q 005693 545 PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNI 623 (682)
Q Consensus 545 ~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-g~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~ 623 (682)
..++..|+|||++....++.++|||||||++|||+| |+.||.+.... .....+. ..... ...
T Consensus 345 ~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~------~~~~~i~-~~~~~----------~~~ 407 (454)
T 1qcf_A 345 AKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP------EVIRALE-RGYRM----------PRP 407 (454)
T ss_dssp SSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH------HHHHHHH-HTCCC----------CCC
T ss_pred CcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHH------HHHHHHH-cCCCC----------CCC
Confidence 335678999999998999999999999999999999 99999754321 1111111 11110 011
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcC
Q 005693 624 EEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 662 (682)
Q Consensus 624 ~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~~ 662 (682)
......+.+++.+||+.||++|||++++++.|+++....
T Consensus 408 ~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~~ 446 (454)
T 1qcf_A 408 ENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTAT 446 (454)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSSS
T ss_pred CCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhcc
Confidence 223346778888999999999999999999999887543
No 37
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=9.4e-40 Score=344.82 Aligned_cols=238 Identities=20% Similarity=0.326 Sum_probs=196.4
Q ss_pred hccccccCeEEEEEEEE-cCCceEEEEEeeccccC---hhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccC
Q 005693 390 AEVLGKGSYGTAYKAVL-EESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 465 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~ 465 (682)
.+.||+|+||.||+|.. .+++.||+|++...... .+.+.+|+++++.+ +||||+++++++...+..++||||+++
T Consensus 20 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~lv~e~~~~ 98 (328)
T 3fe3_A 20 LKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKIL-NHPNIVKLFEVIETEKTLYLIMEYASG 98 (328)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEECCEEEEEEECCCC
Confidence 47899999999999997 46889999999765443 34577899999999 899999999999999999999999999
Q ss_pred CchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCC---
Q 005693 466 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP--- 542 (682)
Q Consensus 466 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~--- 542 (682)
|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 99 ~~L~~~l~~~-----~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~ 170 (328)
T 3fe3_A 99 GEVFDYLVAH-----GRMKEKEARSKFRQIVSAVQYCHQKR---IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKL 170 (328)
T ss_dssp CBHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCGG
T ss_pred CcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---EeccCCCHHHEEEcCCCCEEEeeccCceecCCCCcc
Confidence 9999999643 23899999999999999999999998 999999999999999999999999999765433
Q ss_pred CCCCCCCcccCccccccCCCC-CcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhcccc
Q 005693 543 ATPSRSAGYRAPEVIETRKHS-HKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQ 621 (682)
Q Consensus 543 ~~~~~~~~y~aPE~~~~~~~~-~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 621 (682)
....+|+.|+|||++.+..++ .++||||+||++|||++|+.||.+.. .......+...... ...
T Consensus 171 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~------~~~~~~~i~~~~~~---------~p~ 235 (328)
T 3fe3_A 171 DAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN------LKELRERVLRGKYR---------IPF 235 (328)
T ss_dssp GTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHCCCC---------CCT
T ss_pred ccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCC------HHHHHHHHHhCCCC---------CCC
Confidence 245689999999999888775 78999999999999999999997643 22222222222111 011
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 622 NIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 622 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
. ....+.+++.+||+.||++|||++|++++
T Consensus 236 ~---~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 236 Y---MSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp T---SCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred C---CCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 1 22345677789999999999999999885
No 38
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=2.7e-39 Score=336.17 Aligned_cols=255 Identities=16% Similarity=0.184 Sum_probs=204.4
Q ss_pred hccccccCeEEEEEEEE-cCCceEEEEEeeccccChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccCCch
Q 005693 390 AEVLGKGSYGTAYKAVL-EESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL 468 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~L 468 (682)
.+.||+|+||.||+|.. .+++.||+|++.... ..+.+.+|++++..+.+|+|++++++++......++||||+ +++|
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L 92 (298)
T 1csn_A 15 GRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-GPSL 92 (298)
T ss_dssp EEEEEECSSCEEEEEEETTTTEEEEEEEEECCT-TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-CCBH
T ss_pred EEEEeecCCEEEEEEEECCCCcEEEEEEeccCC-ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec-CCCH
Confidence 46899999999999996 467889999986543 34578899999999988999999999999999999999999 9999
Q ss_pred hHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCC-----eEEeecCCCCCCCCC-
Q 005693 469 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLD-----GCISDFGLTPLMNVP- 542 (682)
Q Consensus 469 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~-----~kl~DfGla~~~~~~- 542 (682)
.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++. +||+|||+++.....
T Consensus 93 ~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~ 165 (298)
T 1csn_A 93 EDLLDLCG----RKFSVKTVAMAAKQMLARVQSIHEKS---LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPV 165 (298)
T ss_dssp HHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTT
T ss_pred HHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEeccCCCCCCCeEEEEECcccccccccc
Confidence 99997532 24899999999999999999999998 999999999999988776 999999999765432
Q ss_pred ----------CCCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcccccc
Q 005693 543 ----------ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEV 612 (682)
Q Consensus 543 ----------~~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~ 612 (682)
....+|+.|+|||++.+..++.++||||||+++|||++|+.||.+....... ...............
T Consensus 166 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~---~~~~~~~~~~~~~~~ 242 (298)
T 1csn_A 166 TKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNK---QKYERIGEKKQSTPL 242 (298)
T ss_dssp TCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHH---HHHHHHHHHHHHSCH
T ss_pred ccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccH---HHHHHHHhhccCccH
Confidence 2335788999999999999999999999999999999999999865432221 111111111100000
Q ss_pred chhhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCC
Q 005693 613 FDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 663 (682)
Q Consensus 613 ~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~~~ 663 (682)
.. ... .....+.+++.+||+.||++||+++++++.|+++.+...
T Consensus 243 --~~--~~~---~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~ 286 (298)
T 1csn_A 243 --RE--LCA---GFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLN 286 (298)
T ss_dssp --HH--HTT---TSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred --HH--HHh---hCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcC
Confidence 00 001 123456778889999999999999999999999987654
No 39
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.2e-39 Score=342.91 Aligned_cols=259 Identities=24% Similarity=0.373 Sum_probs=197.0
Q ss_pred hccccccCeEEEEEEEEcCCceEEEEEeeccccChhhHHHHHHHHHHh-cCCCceeceEEEEEec----CceEEEEeecc
Q 005693 390 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRV-GQHPNVVPLRAYYYSK----DEKLLVYDYFA 464 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l-~~h~niv~l~~~~~~~----~~~~lV~e~~~ 464 (682)
.+.||+|+||.||+|+.. ++.||+|++.... ...+.+|.+++... .+||||+++++++... ...++||||++
T Consensus 42 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~ 118 (337)
T 3mdy_A 42 VKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE--EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHE 118 (337)
T ss_dssp EEEEEEETTEEEEEEEET-TEEEEEEEEEGGG--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEEECCCT
T ss_pred EeEeecCCCeEEEEEEEC-CceEEEEEEeccc--cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEEEeccC
Confidence 578999999999999986 8899999986543 34445555555443 2899999999999887 67899999999
Q ss_pred CCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-----CCCcEecCCCCCCeEecCCCCeEEeecCCCCCC
Q 005693 465 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMG-----GPKFTHGNIKASNVLINQDLDGCISDFGLTPLM 539 (682)
Q Consensus 465 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~-----~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~ 539 (682)
+|+|.++++.. .+++..+..++.|++.||+|||+.+ .++|+||||||+||+++.++.+||+|||++...
T Consensus 119 ~g~L~~~l~~~------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a~~~ 192 (337)
T 3mdy_A 119 NGSLYDYLKST------TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKF 192 (337)
T ss_dssp TCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred CCcHHHHhhcc------CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCceee
Confidence 99999999643 3899999999999999999999880 112999999999999999999999999999655
Q ss_pred CCCC--------CCCCCCcccCccccccCCCCCc------chHHHHHHHHHHHHhC----------CCCCCCCCCCCCCC
Q 005693 540 NVPA--------TPSRSAGYRAPEVIETRKHSHK------SDVYSFGVLLLEMLTG----------KAPLQSPTRDDMVD 595 (682)
Q Consensus 540 ~~~~--------~~~~~~~y~aPE~~~~~~~~~~------sDvwS~Gvvl~elltg----------~~Pf~~~~~~~~~~ 595 (682)
.... ...+|+.|+|||++.+..++.+ +|||||||++|||+|| ..||......+. .
T Consensus 193 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~-~ 271 (337)
T 3mdy_A 193 ISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDP-S 271 (337)
T ss_dssp C---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSC-C
T ss_pred ccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCC-c
Confidence 3322 3357899999999988776665 9999999999999999 555554332221 1
Q ss_pred hhHHHHHHhhhccccccchhhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCC
Q 005693 596 LPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 663 (682)
Q Consensus 596 l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~~~ 663 (682)
. ............. +.........++...+.+++.+||+.||++|||++|++++|+++.+...
T Consensus 272 ~-~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~ 334 (337)
T 3mdy_A 272 Y-EDMREIVCIKKLR----PSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQD 334 (337)
T ss_dssp H-HHHHHHHTTSCCC----CCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTTT
T ss_pred h-hhhHHHHhhhccC----ccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhcc
Confidence 1 1111111111111 1111111123566778899999999999999999999999999987654
No 40
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=3.9e-39 Score=334.93 Aligned_cols=255 Identities=22% Similarity=0.321 Sum_probs=201.4
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeeccccC----hhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeecc
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG----KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 464 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~----~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~ 464 (682)
.+.||+|+||.||+|... +++.||+|++...... .+.+.+|+.++.++ +||||+++++++..++..++||||++
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~ 94 (294)
T 4eqm_A 16 VDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQL-SHQNIVSMIDVDEEDDCYYLVMEYIE 94 (294)
T ss_dssp EEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTC-CBTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcC-CCCCCceEEEeeeeCCeEEEEEeCCC
Confidence 468999999999999975 5788999998654322 34678899999999 89999999999999999999999999
Q ss_pred CCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCCC-
Q 005693 465 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA- 543 (682)
Q Consensus 465 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~- 543 (682)
+|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 95 g~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 166 (294)
T 4eqm_A 95 GPTLSEYIESH-----GPLSVDTAINFTNQILDGIKHAHDMR---IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSL 166 (294)
T ss_dssp SCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCSSSTTC-----
T ss_pred CCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEEeCCCccccccccc
Confidence 99999999743 24899999999999999999999998 9999999999999999999999999998764332
Q ss_pred ----CCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhcc
Q 005693 544 ----TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMR 619 (682)
Q Consensus 544 ----~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 619 (682)
...+|+.|+|||.+.+..++.++||||||+++|||+||+.||.+.... ........+... ......
T Consensus 167 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~------~~~~~~~~~~~~----~~~~~~ 236 (294)
T 4eqm_A 167 TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAV------SIAIKHIQDSVP----NVTTDV 236 (294)
T ss_dssp --------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHH------HHHHHHHSSCCC----CHHHHS
T ss_pred cccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH------HHHHHHhhccCC----Ccchhc
Confidence 234789999999999999999999999999999999999999754321 111111111110 000000
Q ss_pred ccChHHHHHHHHHHHHHcccCCCCCCC-CHHHHHHHHHHhhhcCCCCC
Q 005693 620 FQNIEEEMVQMLQIGMACVAKVPDMRP-NMDEVVRMIEEVRQSDSENR 666 (682)
Q Consensus 620 ~~~~~~~~~~l~~l~~~Cl~~dP~~RP-t~~evl~~L~~i~~~~~~~~ 666 (682)
.. .....+.+++.+|++.||++|| +++++.+.|+.+.......+
T Consensus 237 ~~---~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~~~~~ 281 (294)
T 4eqm_A 237 RK---DIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHENRANE 281 (294)
T ss_dssp CT---TSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSSSTTC
T ss_pred cc---CCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhccCCc
Confidence 11 1234566778899999999999 89999999998876665443
No 41
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=2.2e-39 Score=357.13 Aligned_cols=247 Identities=25% Similarity=0.408 Sum_probs=202.4
Q ss_pred hccccccCeEEEEEEEEcCCceEEEEEeeccccChhhHHHHHHHHHHhcCCCceeceEEEEEecC-ceEEEEeeccCCch
Q 005693 390 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKD-EKLLVYDYFASGSL 468 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~-~~~lV~e~~~~g~L 468 (682)
.+.||+|+||.||+|.+. ++.||||+++... ..+.+.+|++++.++ +||||+++++++.+.+ ..++||||+++|+|
T Consensus 198 ~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~-~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~iv~e~~~~g~L 274 (450)
T 1k9a_A 198 LQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-TAQAFLAEASVMTQL-RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSL 274 (450)
T ss_dssp EEEEEECSSEEEEEEEET-TEEEEEEEESSCT-TSHHHHHHHHHHHTC-CCTTBCCEEEEEECTTSCEEEEEECCTTCBH
T ss_pred EeeecCcCCeeEEEEEec-CCeEEEEEeCCch-HHHHHHHHHHHHHhc-cCCCEEEEEEEEEcCCCceEEEEEecCCCcH
Confidence 578999999999999986 6799999997654 457899999999999 9999999999988765 78999999999999
Q ss_pred hHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCCC-CCCC
Q 005693 469 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA-TPSR 547 (682)
Q Consensus 469 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~-~~~~ 547 (682)
.++++... ...+++..++.++.||+.||+|||+++ |+||||||+|||+++++.+||+|||+++...... ...+
T Consensus 275 ~~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~ 348 (450)
T 1k9a_A 275 VDYLRSRG---RSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL 348 (450)
T ss_dssp HHHHHHHC---TTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTSCEEECCCTTCEECC------CC
T ss_pred HHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHhhEEECCCCCEEEeeCCCcccccccccCCCC
Confidence 99997532 234789999999999999999999998 9999999999999999999999999997654322 2346
Q ss_pred CCcccCccccccCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhccccChHHH
Q 005693 548 SAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEE 626 (682)
Q Consensus 548 ~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-g~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 626 (682)
++.|+|||++.+..++.++|||||||++|||+| |+.||......+ +. .. +...... .....+
T Consensus 349 ~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~---~~---~~-i~~~~~~----------~~p~~~ 411 (450)
T 1k9a_A 349 PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD---VV---PR-VEKGYKM----------DAPDGC 411 (450)
T ss_dssp CTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT---HH---HH-HHTTCCC----------CCCTTC
T ss_pred CcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH---HH---HH-HHcCCCC----------CCCCcC
Confidence 778999999999999999999999999999998 999998654332 11 11 1111110 111223
Q ss_pred HHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcC
Q 005693 627 MVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 662 (682)
Q Consensus 627 ~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~~ 662 (682)
...+.+++.+||+.||++|||++|+++.|+++....
T Consensus 412 ~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~~ 447 (450)
T 1k9a_A 412 PPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTHE 447 (450)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHhh
Confidence 456677888999999999999999999999988643
No 42
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=1e-39 Score=334.58 Aligned_cols=245 Identities=25% Similarity=0.393 Sum_probs=189.2
Q ss_pred hccccccCeEEEEEEEEcCCceEEEEEeecccc-----ChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeecc
Q 005693 390 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVV-----GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 464 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~-----~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~ 464 (682)
.+.||+|+||.||+|... ++.||+|+++.... ..+.+.+|++++..+ +||||+++++++.+++..++||||++
T Consensus 12 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~ 89 (271)
T 3dtc_A 12 EEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAML-KHPNIIALRGVCLKEPNLCLVMEFAR 89 (271)
T ss_dssp EEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHC-CCTTBCCEEEEECCC--CEEEEECCT
T ss_pred eeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhc-CCCCEeeEEEEEecCCceEEEEEcCC
Confidence 468999999999999976 78899999875432 235788999999999 89999999999999999999999999
Q ss_pred CCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecC--------CCCeEEeecCCC
Q 005693 465 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQ--------DLDGCISDFGLT 536 (682)
Q Consensus 465 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~--------~~~~kl~DfGla 536 (682)
+++|.+++.. ..+++..+..++.|++.||+|||+.+..+|+||||||+||+++. ++.+||+|||++
T Consensus 90 ~~~L~~~~~~------~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~ 163 (271)
T 3dtc_A 90 GGPLNRVLSG------KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLA 163 (271)
T ss_dssp TEEHHHHHTS------SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC-
T ss_pred CCCHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCcc
Confidence 9999999953 24899999999999999999999987556999999999999986 678999999999
Q ss_pred CCCCCCC--CCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccch
Q 005693 537 PLMNVPA--TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFD 614 (682)
Q Consensus 537 ~~~~~~~--~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 614 (682)
....... ...+++.|+|||.+.+..++.++||||||+++|||++|+.||.+.... ..............
T Consensus 164 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~------~~~~~~~~~~~~~~--- 234 (271)
T 3dtc_A 164 REWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGL------AVAYGVAMNKLALP--- 234 (271)
T ss_dssp ------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHH------HHHHHHHTSCCCCC---
T ss_pred cccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHhhhcCCCCCC---
Confidence 7654432 345788999999999989999999999999999999999999754311 11111111111100
Q ss_pred hhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHh
Q 005693 615 VELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEV 658 (682)
Q Consensus 615 ~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i 658 (682)
........+.+++.+||+.||++|||++|++++|+++
T Consensus 235 -------~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 235 -------IPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp -------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred -------CCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 1112234567788899999999999999999999864
No 43
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=4.7e-39 Score=343.71 Aligned_cols=241 Identities=21% Similarity=0.346 Sum_probs=196.6
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeecccc-------ChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEe
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV-------GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYD 461 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-------~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e 461 (682)
.+.||+|+||.||+|... +++.||+|+++.... ..+.+.+|+.++.++ +||||+++++++.+.+..++|||
T Consensus 17 ~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lv~e 95 (361)
T 2yab_A 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQV-LHPNIITLHDVYENRTDVVLILE 95 (361)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEEE
T ss_pred eeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhC-CCcCCCcEEEEEEeCCEEEEEEE
Confidence 478999999999999976 478899999976532 235789999999999 89999999999999999999999
Q ss_pred eccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCC----CeEEeecCCCC
Q 005693 462 YFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDL----DGCISDFGLTP 537 (682)
Q Consensus 462 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~----~~kl~DfGla~ 537 (682)
|+++|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+||++++++ .+||+|||++.
T Consensus 96 ~~~gg~L~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~~~~vkl~DFG~a~ 167 (361)
T 2yab_A 96 LVSGGELFDFLAQK-----ESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167 (361)
T ss_dssp CCCSCBHHHHHTTC-----SCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTTSSSCCEEECCCSSCE
T ss_pred cCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEeCCCCCccCEEEEecCCce
Confidence 99999999999642 34899999999999999999999998 99999999999998877 79999999997
Q ss_pred CCCCC---CCCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccch
Q 005693 538 LMNVP---ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFD 614 (682)
Q Consensus 538 ~~~~~---~~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 614 (682)
..... ....||+.|+|||++.+..++.++|||||||++|||++|..||.+.... .....+...... ++
T Consensus 168 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~------~~~~~i~~~~~~---~~ 238 (361)
T 2yab_A 168 EIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ------ETLANITAVSYD---FD 238 (361)
T ss_dssp ECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH------HHHHHHHTTCCC---CC
T ss_pred EcCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHhcCCC---CC
Confidence 76543 2446899999999999989999999999999999999999999764321 112222211110 01
Q ss_pred hhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005693 615 VELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVR 653 (682)
Q Consensus 615 ~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 653 (682)
.. ..... ...+.+++.+||..||++|||++|+++
T Consensus 239 ~~--~~~~~---s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 239 EE--FFSQT---SELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp HH--HHTTS---CHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ch--hccCC---CHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 00 01112 234567777999999999999999986
No 44
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=4.6e-40 Score=354.32 Aligned_cols=247 Identities=25% Similarity=0.383 Sum_probs=200.8
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeecccc--ChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccCC
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 466 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g 466 (682)
.+.||+|+||.||+|... +++.||+|+++.... ..+++.+|++++.++ +||||+++++++..++..++||||+++|
T Consensus 119 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~~~~g 197 (377)
T 3cbl_A 119 GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQY-SHPNIVRLIGVCTQKQPIYIVMELVQGG 197 (377)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTC-CCTTBCCEEEEECSSSSCEEEEECCTTC
T ss_pred eeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEecCCCcEEEEEcCCCC
Confidence 578999999999999986 678899999875432 234688999999999 9999999999999999999999999999
Q ss_pred chhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCCC---
Q 005693 467 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA--- 543 (682)
Q Consensus 467 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~--- 543 (682)
+|.++++... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 198 ~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~ 270 (377)
T 3cbl_A 198 DFLTFLRTEG----ARLRVKTLLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAA 270 (377)
T ss_dssp BHHHHHHHHG----GGCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEEC
T ss_pred CHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC---cCCcccCHHHEEEcCCCcEEECcCCCceecCCCceee
Confidence 9999997432 24899999999999999999999998 9999999999999999999999999987644321
Q ss_pred ---CCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhcc
Q 005693 544 ---TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMR 619 (682)
Q Consensus 544 ---~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-g~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 619 (682)
...+++.|+|||++.+..++.++|||||||++|||+| |..||......+ ....+......
T Consensus 271 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~-------~~~~~~~~~~~--------- 334 (377)
T 3cbl_A 271 SGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQ-------TREFVEKGGRL--------- 334 (377)
T ss_dssp CSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHH-------HHHHHHTTCCC---------
T ss_pred cCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-------HHHHHHcCCCC---------
Confidence 1123557999999998899999999999999999999 999997543211 11111111110
Q ss_pred ccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 005693 620 FQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQS 661 (682)
Q Consensus 620 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~ 661 (682)
.........+.+++.+||+.||++|||++++++.|+++...
T Consensus 335 -~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~ 375 (377)
T 3cbl_A 335 -PCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR 375 (377)
T ss_dssp -CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence 01112234567788899999999999999999999998754
No 45
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=1.1e-38 Score=337.87 Aligned_cols=238 Identities=21% Similarity=0.284 Sum_probs=195.6
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeeccc----cChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeecc
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 464 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~ 464 (682)
.+.||+|+||.||+|+.+ +++.||+|+++... .....+.+|++++..+ +||||+++++++.+.+..++||||++
T Consensus 10 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~~lv~E~~~ 88 (337)
T 1o6l_A 10 LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT-RHPFLTALKYAFQTHDRLCFVMEYAN 88 (337)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC-CCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhC-CCCcCcceEEEEEeCCEEEEEEeCCC
Confidence 478999999999999976 47889999997642 2345688899999998 89999999999999999999999999
Q ss_pred CCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCC--
Q 005693 465 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP-- 542 (682)
Q Consensus 465 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~-- 542 (682)
+|+|.+++... ..+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 89 gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~ 160 (337)
T 1o6l_A 89 GGELFFHLSRE-----RVFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA 160 (337)
T ss_dssp TCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTC
T ss_pred CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCcCCHHHEEECCCCCEEEeeccchhhcccCCC
Confidence 99999999743 24899999999999999999999998 999999999999999999999999999764322
Q ss_pred --CCCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhccc
Q 005693 543 --ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 620 (682)
Q Consensus 543 --~~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 620 (682)
....||+.|+|||++.+..++.++|||||||++|||++|+.||.+... ......+...... ..
T Consensus 161 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~------~~~~~~i~~~~~~---------~p 225 (337)
T 1o6l_A 161 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH------ERLFELILMEEIR---------FP 225 (337)
T ss_dssp CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHCCCC---------CC
T ss_pred cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCH------HHHHHHHHcCCCC---------CC
Confidence 234578999999999999999999999999999999999999975431 1222222221110 01
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 005693 621 QNIEEEMVQMLQIGMACVAKVPDMRP-----NMDEVVRM 654 (682)
Q Consensus 621 ~~~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~evl~~ 654 (682)
... ...+.+++.+||+.||++|| +++|++++
T Consensus 226 ~~~---s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 226 RTL---SPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp TTS---CHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred CCC---CHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 112 23456677799999999999 89999875
No 46
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=6.4e-39 Score=346.12 Aligned_cols=245 Identities=19% Similarity=0.296 Sum_probs=194.9
Q ss_pred hccccccCeEEEEEEEEcC-CceEEEEEeeccccC----hhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeecc
Q 005693 390 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVVVG----KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 464 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~----~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~ 464 (682)
.+.||+|+||.||+|+.+. ++.||+|++++.... .+.+.+|..++.++.+||||+++++++.+++..++||||++
T Consensus 57 ~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV~E~~~ 136 (396)
T 4dc2_A 57 LRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVN 136 (396)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEEEEcCC
Confidence 5789999999999999765 678999999865332 24578899999888789999999999999999999999999
Q ss_pred CCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCC---
Q 005693 465 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV--- 541 (682)
Q Consensus 465 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~--- 541 (682)
+|+|.+++... ..+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 137 gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~ 208 (396)
T 4dc2_A 137 GGDLMFHMQRQ-----RKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD 208 (396)
T ss_dssp TCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC
T ss_pred CCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEECCCCCEEEeecceeeecccCCC
Confidence 99999999743 24899999999999999999999998 99999999999999999999999999976322
Q ss_pred -CCCCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCC--CChhHHHHHHhhhccccccchhhhc
Q 005693 542 -PATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDM--VDLPRWVQSVVREEWTAEVFDVELM 618 (682)
Q Consensus 542 -~~~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~--~~l~~~~~~~~~~~~~~~~~d~~l~ 618 (682)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||......+. ..........+..... .
T Consensus 209 ~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~--------~ 280 (396)
T 4dc2_A 209 TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI--------R 280 (396)
T ss_dssp CBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCC--------C
T ss_pred ccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhcccc--------C
Confidence 2345689999999999999999999999999999999999999975432221 1111112211111110 0
Q ss_pred cccChHHHHHHHHHHHHHcccCCCCCCCCH------HHHHH
Q 005693 619 RFQNIEEEMVQMLQIGMACVAKVPDMRPNM------DEVVR 653 (682)
Q Consensus 619 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~------~evl~ 653 (682)
.... ....+.+++.+||+.||++||++ +|+++
T Consensus 281 ~p~~---~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~ 318 (396)
T 4dc2_A 281 IPRS---LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQG 318 (396)
T ss_dssp CCTT---SCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHH
T ss_pred CCCc---CCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhc
Confidence 1111 22345677789999999999985 66666
No 47
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.2e-39 Score=341.20 Aligned_cols=244 Identities=20% Similarity=0.312 Sum_probs=198.6
Q ss_pred hccccccCeEEEEEEEEcC-CceEEEEEeeccccChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccCCch
Q 005693 390 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL 468 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~L 468 (682)
.+.||+|+||.||+|.... ++.+|+|.++........+.+|++++..+ +||||+++++++.+.+..++||||+++|+|
T Consensus 10 ~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L 88 (321)
T 1tki_A 10 AEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIA-RHRNILHLHESFESMEELVMIFEFISGLDI 88 (321)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHS-CCTTBCCEEEEEEETTEEEEEECCCCCCBH
T ss_pred eeEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhC-CCCCCCeEeEEEecCCEEEEEEEeCCCCCH
Confidence 4679999999999999764 67899999876544556788999999998 899999999999999999999999999999
Q ss_pred hHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecC--CCCeEEeecCCCCCCCCCCC--
Q 005693 469 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQ--DLDGCISDFGLTPLMNVPAT-- 544 (682)
Q Consensus 469 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~--~~~~kl~DfGla~~~~~~~~-- 544 (682)
.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++. ++.+||+|||+++.......
T Consensus 89 ~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH~~g---ivH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~ 161 (321)
T 1tki_A 89 FERINTSA----FELNEREIVSYVHQVCEALQFLHSHN---IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFR 161 (321)
T ss_dssp HHHHTSSS----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEEE
T ss_pred HHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCccc
Confidence 99996432 34899999999999999999999998 999999999999997 78999999999987654332
Q ss_pred -CCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhccccCh
Q 005693 545 -PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNI 623 (682)
Q Consensus 545 -~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~ 623 (682)
..+++.|+|||++.+..++.++|||||||++|||++|..||.+.... .....+....... +. ....
T Consensus 162 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~------~~~~~i~~~~~~~---~~--~~~~-- 228 (321)
T 1tki_A 162 LLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ------QIIENIMNAEYTF---DE--EAFK-- 228 (321)
T ss_dssp EEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH------HHHHHHHHTCCCC---CH--HHHT--
T ss_pred cccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHH------HHHHHHHcCCCCC---Ch--hhhc--
Confidence 34788999999999888999999999999999999999999764321 2222222221110 00 0011
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 005693 624 EEEMVQMLQIGMACVAKVPDMRPNMDEVVRMI 655 (682)
Q Consensus 624 ~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L 655 (682)
.....+.+++.+|++.||++|||++|++++-
T Consensus 229 -~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp 259 (321)
T 1tki_A 229 -EISIEAMDFVDRLLVKERKSRMTASEALQHP 259 (321)
T ss_dssp -TSCHHHHHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred -cCCHHHHHHHHHHcCCChhHCcCHHHHhcCh
Confidence 1234566778899999999999999999843
No 48
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.1e-39 Score=343.10 Aligned_cols=240 Identities=20% Similarity=0.307 Sum_probs=191.7
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeecccc--ChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccCC
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 466 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g 466 (682)
.+.||+|+||+||+|... +++.||+|++..... ..+.+.+|+++++++ +||||+++++++...+..++||||+++|
T Consensus 15 ~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l-~hpnIv~l~~~~~~~~~~~lv~E~~~gg 93 (347)
T 3zgw_A 15 HETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNL-RHQHICQLYHVLETANKIFMVLEYCPGG 93 (347)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred EEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhC-CCCCEeeEEEEEEeCCEEEEEEeCCCCC
Confidence 478999999999999974 578899999976542 345788999999999 8999999999999999999999999999
Q ss_pred chhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCC----
Q 005693 467 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP---- 542 (682)
Q Consensus 467 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~---- 542 (682)
+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||++......
T Consensus 94 ~L~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~ 165 (347)
T 3zgw_A 94 ELFDYIISQ-----DRLSEEETRVVFRQIVSAVAYVHSQG---YAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYH 165 (347)
T ss_dssp BHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBC--------
T ss_pred CHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCccHHHEEEcCCCCEEEEeccCcccccCCCCcc
Confidence 999999643 24899999999999999999999998 999999999999999999999999998765432
Q ss_pred -CCCCCCCcccCccccccCCC-CCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhccc
Q 005693 543 -ATPSRSAGYRAPEVIETRKH-SHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 620 (682)
Q Consensus 543 -~~~~~~~~y~aPE~~~~~~~-~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 620 (682)
....||+.|+|||++.+..+ +.++||||+||++|||++|..||.+.. .......+...... ..
T Consensus 166 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~------~~~~~~~i~~~~~~---------~p 230 (347)
T 3zgw_A 166 LQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDN------VMALYKKIMRGKYD---------VP 230 (347)
T ss_dssp ------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHTCCC---------CC
T ss_pred ccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCC------HHHHHHHHHcCCCC---------CC
Confidence 23457899999999988775 889999999999999999999997543 22222222222111 01
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 005693 621 QNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIE 656 (682)
Q Consensus 621 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~ 656 (682)
.. ....+.+++.+||+.||++|||++|++++-.
T Consensus 231 ~~---~s~~~~~li~~~L~~dP~~Rps~~eil~hp~ 263 (347)
T 3zgw_A 231 KW---LSPSSILLLQQMLQVDPKKRISMKNLLNHPW 263 (347)
T ss_dssp TT---CCHHHHHHHHHHTCSSGGGSCCHHHHHTCHH
T ss_pred CC---CCHHHHHHHHHHcccCHhHCcCHHHHhcCcc
Confidence 11 1234567788999999999999999998544
No 49
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=3.1e-39 Score=330.07 Aligned_cols=247 Identities=25% Similarity=0.417 Sum_probs=206.0
Q ss_pred hccccccCeEEEEEEEEcCCceEEEEEeeccccChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccCCchh
Q 005693 390 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLS 469 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~L~ 469 (682)
.+.||+|+||.||+|...+++.||+|++.......+++.+|++++.++ +||||+++++++.+++..++||||+++|+|.
T Consensus 13 ~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 91 (267)
T 3t9t_A 13 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKL-SHPKLVQLYGVCLEQAPICLVTEFMEHGCLS 91 (267)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEECTTTBCHHHHHHHHHHHHTC-CCTTBCCEEEEECSSSSCEEEECCCTTCBHH
T ss_pred eeEecCCCceeEEEEEecCCCeEEEEEccccCCCHHHHHHHHHHHHhC-CCCCEeeEEEEEccCCCeEEEEeCCCCCcHH
Confidence 468999999999999998888999999988766778899999999999 8999999999999999999999999999999
Q ss_pred HhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCC-----CC
Q 005693 470 TLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP-----AT 544 (682)
Q Consensus 470 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~-----~~ 544 (682)
+++.... ..+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||++...... ..
T Consensus 92 ~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~ 164 (267)
T 3t9t_A 92 DYLRTQR----GLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 164 (267)
T ss_dssp HHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTS
T ss_pred HHHhhCc----ccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEECCCCCEEEccccccccccccccccccc
Confidence 9997543 34899999999999999999999998 999999999999999999999999998765432 23
Q ss_pred CCCCCcccCccccccCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhccccCh
Q 005693 545 PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNI 623 (682)
Q Consensus 545 ~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-g~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~ 623 (682)
..+++.|+|||++.+..++.++||||||+++|||++ |+.||..... ......+... .... ..
T Consensus 165 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~------~~~~~~i~~~-~~~~-------~~--- 227 (267)
T 3t9t_A 165 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN------SEVVEDISTG-FRLY-------KP--- 227 (267)
T ss_dssp TTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH------HHHHHHHHTT-CCCC-------CC---
T ss_pred ccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCH------HHHHHHHhcC-CcCC-------CC---
Confidence 345678999999998899999999999999999999 8999975431 1111211111 1000 01
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 005693 624 EEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQS 661 (682)
Q Consensus 624 ~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~ 661 (682)
......+.+++.+||+.||++|||++|++++|+++.+.
T Consensus 228 ~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (267)
T 3t9t_A 228 RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265 (267)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred ccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 11234566788899999999999999999999999864
No 50
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=2.2e-39 Score=339.69 Aligned_cols=253 Identities=26% Similarity=0.382 Sum_probs=193.7
Q ss_pred hccccccCeEEEEEEEEcCCceEEEEEeeccccC---hhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccCC
Q 005693 390 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 466 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g 466 (682)
.+.||+|+||+||+|+..+++.||+|++...... .+.+.+|++++.++ +||||+++++++.+++..++||||+++
T Consensus 26 ~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~~- 103 (311)
T 3niz_A 26 LEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKEL-HHPNIVSLIDVIHSERCLTLVFEFMEK- 103 (311)
T ss_dssp EEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHC-CCTTBCCEEEEECCSSCEEEEEECCSE-
T ss_pred hhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHc-CCCCEeeeeeEEccCCEEEEEEcCCCC-
Confidence 4689999999999999988999999999754332 35688999999999 899999999999999999999999985
Q ss_pred chhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCC----
Q 005693 467 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP---- 542 (682)
Q Consensus 467 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~---- 542 (682)
+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 104 ~l~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~ 176 (311)
T 3niz_A 104 DLKKVLDENK----TGLQDSQIKIYLYQLLRGVAHCHQHR---ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY 176 (311)
T ss_dssp EHHHHHHTCT----TCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC--
T ss_pred CHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCchHhEEECCCCCEEEccCcCceecCCCcccc
Confidence 8888886533 34899999999999999999999998 999999999999999999999999999765432
Q ss_pred CCCCCCCcccCcccccc-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccc---cchh---
Q 005693 543 ATPSRSAGYRAPEVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAE---VFDV--- 615 (682)
Q Consensus 543 ~~~~~~~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~---~~d~--- 615 (682)
....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||.+....+. ............... ..+.
T Consensus 177 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~ 253 (311)
T 3niz_A 177 THEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQ---LPKIFSILGTPNPREWPQVQELPLW 253 (311)
T ss_dssp -CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTH---HHHHHHHHCCCCTTTSGGGTTSHHH
T ss_pred cCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHH---HHHHHHHHCCCChHHhhhhhccchh
Confidence 23457889999999876 5689999999999999999999999986554332 111111111100000 0000
Q ss_pred ---hhc--cccC----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 616 ---ELM--RFQN----IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 616 ---~l~--~~~~----~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
... .... .+.....+.+++.+||+.||++|||++|++++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 301 (311)
T 3niz_A 254 KQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH 301 (311)
T ss_dssp HSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 000 0000 01122456788889999999999999999873
No 51
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=1.3e-39 Score=350.06 Aligned_cols=248 Identities=26% Similarity=0.497 Sum_probs=192.8
Q ss_pred hccccccCeEEEEEEEEc----CCceEEEEEeecccc--ChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeec
Q 005693 390 AEVLGKGSYGTAYKAVLE----ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYF 463 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~----~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~ 463 (682)
.+.||+|+||.||+|+.. ++..||+|+++.... ..+++.+|++++.++ +||||+++++++.+.+..++||||+
T Consensus 50 ~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~ 128 (373)
T 2qol_A 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF-DHPNIIRLEGVVTKSKPVMIVTEYM 128 (373)
T ss_dssp CEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECSSSSCEEEEECC
T ss_pred eeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEeeCCceEEEEeCC
Confidence 478999999999999865 467799999975432 245788999999999 8999999999999999999999999
Q ss_pred cCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCCC
Q 005693 464 ASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA 543 (682)
Q Consensus 464 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~ 543 (682)
++|+|.++++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 129 ~~~sL~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 201 (373)
T 2qol_A 129 ENGSLDSFLRKHD----AQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDP 201 (373)
T ss_dssp TTCBHHHHHHTTT----TCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred CCCcHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEEcCCCCEEECcCccccccccCC
Confidence 9999999997532 34899999999999999999999998 9999999999999999999999999998764332
Q ss_pred C-------CCCCCcccCccccccCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchh
Q 005693 544 T-------PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDV 615 (682)
Q Consensus 544 ~-------~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-g~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 615 (682)
. ..+++.|+|||++.+..++.++||||||+++|||++ |+.||...... ..... +.....
T Consensus 202 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~------~~~~~-i~~~~~------ 268 (373)
T 2qol_A 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ------DVIKA-VDEGYR------ 268 (373)
T ss_dssp ------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHH------HHHHH-HHTTEE------
T ss_pred ccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHH------HHHHH-HHcCCC------
Confidence 1 123567999999999999999999999999999998 99999754321 11111 111110
Q ss_pred hhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcC
Q 005693 616 ELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 662 (682)
Q Consensus 616 ~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~~ 662 (682)
..........+.+++.+||+.||++||+++|+++.|+++.+..
T Consensus 269 ----~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~ 311 (373)
T 2qol_A 269 ----LPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311 (373)
T ss_dssp ----CCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCG
T ss_pred ----CCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCc
Confidence 0111123456778888999999999999999999999997643
No 52
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=4.9e-40 Score=347.09 Aligned_cols=246 Identities=22% Similarity=0.376 Sum_probs=194.5
Q ss_pred hccccccCeEEEEEEEEcC-Cc----eEEEEEeeccc--cChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEee
Q 005693 390 AEVLGKGSYGTAYKAVLEE-ST----TVVVKRLKEVV--VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDY 462 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~-~~----~vavK~l~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~ 462 (682)
.+.||+|+||+||+|++.. ++ .||+|.+.... ...+++.+|++++.++ +||||+++++++..+ ..++|+||
T Consensus 20 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~-~~~~v~e~ 97 (327)
T 3poz_A 20 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-DNPHVCRLLGICLTS-TVQLITQL 97 (327)
T ss_dssp EEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHC-CBTTBCCEEEEEESS-SEEEEEEC
T ss_pred ceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCEeEEEEEEecC-CeEEEEEe
Confidence 4789999999999999643 33 35888876443 2456799999999999 899999999999875 47899999
Q ss_pred ccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCC
Q 005693 463 FASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP 542 (682)
Q Consensus 463 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~ 542 (682)
+++|+|.+++.... ..+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 98 ~~~g~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~ 170 (327)
T 3poz_A 98 MPFGCLLDYVREHK----DNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170 (327)
T ss_dssp CTTCBHHHHHHHST----TSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCTTHHHHHTTT
T ss_pred cCCCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCChheEEECCCCCEEEccCcceeEccCC
Confidence 99999999997543 34899999999999999999999998 999999999999999999999999998765432
Q ss_pred C------CCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchh
Q 005693 543 A------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDV 615 (682)
Q Consensus 543 ~------~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-g~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 615 (682)
. ...+++.|+|||++.+..++.++|||||||++|||+| |+.||.+....+. .........
T Consensus 171 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~-------~~~~~~~~~------ 237 (327)
T 3poz_A 171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI-------SSILEKGER------ 237 (327)
T ss_dssp CC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH-------HHHHHTTCC------
T ss_pred cccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHH-------HHHHHcCCC------
Confidence 2 2234678999999999999999999999999999999 9999986543221 111111110
Q ss_pred hhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 005693 616 ELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQS 661 (682)
Q Consensus 616 ~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~ 661 (682)
..........+.+++.+||+.+|++||+++|++++|+.+.+.
T Consensus 238 ----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~ 279 (327)
T 3poz_A 238 ----LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp ----CCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred ----CCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence 011112334577788899999999999999999999998754
No 53
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=1.4e-39 Score=362.79 Aligned_cols=248 Identities=26% Similarity=0.404 Sum_probs=206.3
Q ss_pred hccccccCeEEEEEEEEcC-CceEEEEEeeccccChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccCCch
Q 005693 390 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL 468 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~L 468 (682)
.+.||+|+||.||+|.+.. +..||||+++......+++.+|++++.++ +||||+++++++...+..++||||+++|+|
T Consensus 225 ~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~E~~~~g~L 303 (495)
T 1opk_A 225 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNL 303 (495)
T ss_dssp EEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSCEEEEECCTTCBH
T ss_pred eeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhc-CCCCEeeEEEEEecCCcEEEEEEccCCCCH
Confidence 5789999999999999875 77899999987766778899999999999 999999999999999999999999999999
Q ss_pred hHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCCC-----
Q 005693 469 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA----- 543 (682)
Q Consensus 469 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~----- 543 (682)
.++++... ...+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 304 ~~~l~~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~ 377 (495)
T 1opk_A 304 LDYLRECN---RQEVSAVVLLYMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 377 (495)
T ss_dssp HHHHHHSC---TTTSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEECCT
T ss_pred HHHHHhcC---cCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChhhEEECCCCcEEEeecccceeccCCceeecC
Confidence 99997543 234899999999999999999999998 9999999999999999999999999998764322
Q ss_pred CCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhccccC
Q 005693 544 TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQN 622 (682)
Q Consensus 544 ~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-g~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~ 622 (682)
...++..|+|||++.+..++.++|||||||++|||+| |..||.+....+ +.. .+...... ..
T Consensus 378 ~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~---~~~----~~~~~~~~----------~~ 440 (495)
T 1opk_A 378 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ---VYE----LLEKDYRM----------ER 440 (495)
T ss_dssp TCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---HHH----HHHTTCCC----------CC
T ss_pred CCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHH---HHH----HHHcCCCC----------CC
Confidence 2234568999999999899999999999999999999 999998654322 111 11111110 11
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 005693 623 IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQS 661 (682)
Q Consensus 623 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~ 661 (682)
.......+.+++.+||+.||++|||++|+++.|+.+.+.
T Consensus 441 ~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~~ 479 (495)
T 1opk_A 441 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 479 (495)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCSS
T ss_pred CCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHhc
Confidence 112334567788899999999999999999999988643
No 54
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=1.8e-39 Score=357.95 Aligned_cols=249 Identities=25% Similarity=0.425 Sum_probs=201.8
Q ss_pred hccccccCeEEEEEEEEcCCceEEEEEeeccccChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccCCchh
Q 005693 390 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLS 469 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~L~ 469 (682)
.+.||+|+||.||+|.++++..||||+++......+++.+|+++++++ +||||+++++++.+ +..++||||+++|+|.
T Consensus 189 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~-~~~~iv~e~~~~gsL~ 266 (452)
T 1fmk_A 189 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAVVSE-EPIYIVTEYMSKGSLL 266 (452)
T ss_dssp EEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHC-CCTTBCCEEEEECS-SSCEEEECCCTTCBHH
T ss_pred eeeecCCCCeEEEEEEECCCceEEEEEeccCCCCHHHHHHHHHHHHhC-CCCCEeeEEEEEcC-CceEEEehhhcCCCHH
Confidence 578999999999999999888899999987666678899999999999 99999999999865 6789999999999999
Q ss_pred HhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCCC-----C
Q 005693 470 TLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA-----T 544 (682)
Q Consensus 470 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~-----~ 544 (682)
+++.... ...+++..+..++.|++.||+|||+++ |+||||||+|||+++++.+||+|||+++...... .
T Consensus 267 ~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 340 (452)
T 1fmk_A 267 DFLKGET---GKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 340 (452)
T ss_dssp HHHSHHH---HTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCCTTC------------
T ss_pred HHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEECCCCCEEECCCccceecCCCceecccC
Confidence 9997432 124899999999999999999999998 9999999999999999999999999998764322 2
Q ss_pred CCCCCcccCccccccCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhccccCh
Q 005693 545 PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNI 623 (682)
Q Consensus 545 ~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-g~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~ 623 (682)
..++..|+|||++.+..++.++||||||+++|||++ |+.||.+.... .....+ ...... ...
T Consensus 341 ~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~------~~~~~i-~~~~~~----------~~~ 403 (452)
T 1fmk_A 341 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR------EVLDQV-ERGYRM----------PCP 403 (452)
T ss_dssp --CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH------HHHHHH-HTTCCC----------CCC
T ss_pred CcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHH------HHHHHH-HcCCCC----------CCC
Confidence 234678999999999999999999999999999999 99999754321 111111 111110 011
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCC
Q 005693 624 EEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 663 (682)
Q Consensus 624 ~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~~~ 663 (682)
......+.+++.+||+.||++|||++++++.|+++.....
T Consensus 404 ~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~~ 443 (452)
T 1fmk_A 404 PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 443 (452)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSC
T ss_pred CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccCC
Confidence 1234467788889999999999999999999998875543
No 55
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=1.2e-39 Score=338.60 Aligned_cols=255 Identities=24% Similarity=0.409 Sum_probs=196.8
Q ss_pred hccccccCeEEEEEEEEc-----CCceEEEEEeecccc-ChhhHHHHHHHHHHhcCCCceeceEEEEEec--CceEEEEe
Q 005693 390 AEVLGKGSYGTAYKAVLE-----ESTTVVVKRLKEVVV-GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSK--DEKLLVYD 461 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-----~~~~vavK~l~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~--~~~~lV~e 461 (682)
.+.||+|+||+||+|++. +++.||+|++..... ..+.+.+|++++.++ +||||+++++++... ...++|||
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~lv~e 93 (295)
T 3ugc_A 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKYKGVCYSAGRRNLKLIME 93 (295)
T ss_dssp EEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECHHHHTSCEEEEE
T ss_pred hheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEecCCCCceEEEEE
Confidence 478999999999999852 578899999875432 235788999999999 899999999998653 56899999
Q ss_pred eccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCC
Q 005693 462 YFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV 541 (682)
Q Consensus 462 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~ 541 (682)
|+++|+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.....
T Consensus 94 ~~~~~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 166 (295)
T 3ugc_A 94 YLPYGSLRDYLQKHK----ERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQ 166 (295)
T ss_dssp CCTTCBHHHHHHHCG----GGCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCCSCC----
T ss_pred eCCCCCHHHHHHhcc----cccCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHhhEEEcCCCeEEEccCcccccccC
Confidence 999999999997543 24899999999999999999999998 99999999999999999999999999987643
Q ss_pred CC-------CCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCC-------CCCC--hhHHHHHHhh
Q 005693 542 PA-------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRD-------DMVD--LPRWVQSVVR 605 (682)
Q Consensus 542 ~~-------~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~-------~~~~--l~~~~~~~~~ 605 (682)
.. ...++..|+|||++.+..++.++||||||+++|||+||..|+...... .... ..........
T Consensus 167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (295)
T 3ugc_A 167 DKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLK 246 (295)
T ss_dssp ---------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHH
T ss_pred CcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHh
Confidence 32 223456699999999999999999999999999999999998643110 0000 0000111111
Q ss_pred hccccccchhhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcC
Q 005693 606 EEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 662 (682)
Q Consensus 606 ~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~~ 662 (682)
... ...........+.+++.+||+.||++|||++|+++.|+++.+..
T Consensus 247 ~~~----------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l 293 (295)
T 3ugc_A 247 NNG----------RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293 (295)
T ss_dssp TTC----------CCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred ccC----------cCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhc
Confidence 110 11111223456777888999999999999999999999998654
No 56
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=1.9e-39 Score=342.19 Aligned_cols=247 Identities=21% Similarity=0.350 Sum_probs=179.9
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeeccccChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccCCch
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL 468 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~L 468 (682)
.+.||+|+||.||+|... +++.||+|++... ....+.+|+.++..+.+||||+++++++.++...++||||+++|+|
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 93 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR--MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGEL 93 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG--GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh--hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcH
Confidence 467999999999999986 4788999999653 2467788999999996699999999999999999999999999999
Q ss_pred hHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCC---CeEEeecCCCCCCCCC---
Q 005693 469 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDL---DGCISDFGLTPLMNVP--- 542 (682)
Q Consensus 469 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~---~~kl~DfGla~~~~~~--- 542 (682)
.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++ .+||+|||+++.....
T Consensus 94 ~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~ 165 (325)
T 3kn6_A 94 FERIKKK-----KHFSETEASYIMRKLVSAVSHMHDVG---VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQP 165 (325)
T ss_dssp HHHHHHC-----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEC----CEEEECCCTTCEECCC----
T ss_pred HHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---CeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCc
Confidence 9999753 34899999999999999999999998 99999999999998766 7999999999765433
Q ss_pred -CCCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCC-ChhHHHHHHhhhccccccchhhhccc
Q 005693 543 -ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMV-DLPRWVQSVVREEWTAEVFDVELMRF 620 (682)
Q Consensus 543 -~~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~-~l~~~~~~~~~~~~~~~~~d~~l~~~ 620 (682)
....+|+.|+|||++.+..++.++|||||||++|||++|+.||......... ........+....... ..
T Consensus 166 ~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~---~~----- 237 (325)
T 3kn6_A 166 LKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSF---EG----- 237 (325)
T ss_dssp ------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCC---CS-----
T ss_pred ccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCC---Cc-----
Confidence 2345688999999999999999999999999999999999999865433221 2222222222221110 00
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 621 QNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 621 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
.........+.+++.+||+.||++|||++|++++
T Consensus 238 ~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 271 (325)
T 3kn6_A 238 EAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYN 271 (325)
T ss_dssp HHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred ccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence 0001223456778889999999999999998764
No 57
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=7.1e-40 Score=350.11 Aligned_cols=254 Identities=27% Similarity=0.374 Sum_probs=202.1
Q ss_pred hccccccCeEEEEEEEEc------CCceEEEEEeecccc--ChhhHHHHHHHHHHhcCCCceeceEEEEEecCc-eEEEE
Q 005693 390 AEVLGKGSYGTAYKAVLE------ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDE-KLLVY 460 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~-~~lV~ 460 (682)
.+.||+|+||.||+|++. +++.||||+++.... ..+.+.+|++++.++.+||||+++++++.+.+. .++||
T Consensus 27 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~~iv~ 106 (359)
T 3vhe_A 27 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 106 (359)
T ss_dssp EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEEEE
T ss_pred ceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCCceEEEE
Confidence 578999999999999843 346899999976432 235689999999999889999999999987654 89999
Q ss_pred eeccCCchhHhhccCCCCC-------------------------------------------------------------
Q 005693 461 DYFASGSLSTLLHGNRGAG------------------------------------------------------------- 479 (682)
Q Consensus 461 e~~~~g~L~~~l~~~~~~~------------------------------------------------------------- 479 (682)
||+++|+|.++++......
T Consensus 107 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (359)
T 3vhe_A 107 EFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLY 186 (359)
T ss_dssp ECCTTEEHHHHHHTTTTSBCSCC------------------------------------------------------CTT
T ss_pred EecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhcccccchh
Confidence 9999999999997653210
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCCC------CCCCCCcccC
Q 005693 480 RTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA------TPSRSAGYRA 553 (682)
Q Consensus 480 ~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~------~~~~~~~y~a 553 (682)
...+++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++...... ...+|+.|+|
T Consensus 187 ~~~l~~~~~~~~~~ql~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~a 263 (359)
T 3vhe_A 187 KDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMA 263 (359)
T ss_dssp TTCBCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGGGCC
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCceeEC
Confidence 122899999999999999999999998 9999999999999999999999999998654322 2335778999
Q ss_pred ccccccCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhccccChHHHHHHHHH
Q 005693 554 PEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQ 632 (682)
Q Consensus 554 PE~~~~~~~~~~sDvwS~Gvvl~ellt-g~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~ 632 (682)
||++.+..++.++||||||+++|||+| |+.||.+....+ .............. .......+.+
T Consensus 264 PE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~------~~~~~~~~~~~~~~----------~~~~~~~l~~ 327 (359)
T 3vhe_A 264 PETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE------EFCRRLKEGTRMRA----------PDYTTPEMYQ 327 (359)
T ss_dssp HHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH------HHHHHHHHTCCCCC----------CTTCCHHHHH
T ss_pred hhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH------HHHHHHHcCCCCCC----------CCCCCHHHHH
Confidence 999999999999999999999999998 999997654321 11111111111110 0112235677
Q ss_pred HHHHcccCCCCCCCCHHHHHHHHHHhhhcC
Q 005693 633 IGMACVAKVPDMRPNMDEVVRMIEEVRQSD 662 (682)
Q Consensus 633 l~~~Cl~~dP~~RPt~~evl~~L~~i~~~~ 662 (682)
++.+||+.||++|||++|++++|+++.+..
T Consensus 328 li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 357 (359)
T 3vhe_A 328 TMLDCWHGEPSQRPTFSELVEHLGNLLQAN 357 (359)
T ss_dssp HHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHccCChhhCCCHHHHHHHHHHHHHHh
Confidence 888999999999999999999999988654
No 58
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=5.7e-40 Score=346.23 Aligned_cols=246 Identities=22% Similarity=0.342 Sum_probs=194.8
Q ss_pred hccccccCeEEEEEEEEcC-Cce----EEEEEeecccc--ChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEee
Q 005693 390 AEVLGKGSYGTAYKAVLEE-STT----VVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDY 462 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~-~~~----vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~ 462 (682)
.+.||+|+||+||+|.+.. ++. ||+|.+..... ..+.+.+|+.++.++ +||||+++++++. ++..++||||
T Consensus 18 ~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~-~~~~~~v~e~ 95 (325)
T 3kex_A 18 LKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSL-DHAHIVRLLGLCP-GSSLQLVTQY 95 (325)
T ss_dssp EEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTC-CCTTBCCEEEEEC-BSSEEEEEEC
T ss_pred eeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcC-CCCCcCeEEEEEc-CCccEEEEEe
Confidence 4789999999999999754 333 77777754422 235678899999998 9999999999885 5678999999
Q ss_pred ccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCC
Q 005693 463 FASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP 542 (682)
Q Consensus 463 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~ 542 (682)
+++|+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 96 ~~~~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 168 (325)
T 3kex_A 96 LPLGSLLDHVRQHR----GALGPQLLLNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPD 168 (325)
T ss_dssp CTTCBSHHHHHSSG----GGSCTTHHHHHHHHHHHHHHHHHHTT---CCCSCCSSTTEEESSSSCEEECSCSGGGGSCCC
T ss_pred CCCCCHHHHHHHcc----ccCCHHHHHHHHHHHHHHHHHHHhCC---CCCCccchheEEECCCCeEEECCCCcccccCcc
Confidence 99999999997542 34889999999999999999999998 999999999999999999999999999876433
Q ss_pred C------CCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchh
Q 005693 543 A------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDV 615 (682)
Q Consensus 543 ~------~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-g~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 615 (682)
. ...++..|+|||++.+..++.++||||||+++|||+| |+.||.+....+. ... ........
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~------~~~-~~~~~~~~---- 237 (325)
T 3kex_A 169 DKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEV------PDL-LEKGERLA---- 237 (325)
T ss_dssp TTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHH------HHH-HHTTCBCC----
T ss_pred cccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHH------HHH-HHcCCCCC----
Confidence 2 2235678999999999999999999999999999999 9999986543221 111 11111000
Q ss_pred hhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 005693 616 ELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQS 661 (682)
Q Consensus 616 ~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~ 661 (682)
........+.+++.+||+.||++|||++|++++|+.+...
T Consensus 238 ------~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~ 277 (325)
T 3kex_A 238 ------QPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARD 277 (325)
T ss_dssp ------CCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred ------CCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 0011122456788899999999999999999999998754
No 59
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=2e-38 Score=333.46 Aligned_cols=263 Identities=17% Similarity=0.253 Sum_probs=205.5
Q ss_pred hccccccCeEEEEEEEEcC-CceEEEEEeeccc--cChhhHHHHHHHHHHhcCCCceeceEEEEEecC--ceEEEEeecc
Q 005693 390 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVV--VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKD--EKLLVYDYFA 464 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~--~~~lV~e~~~ 464 (682)
.+.||+|+||+||+|.... ++.||+|+++... ...+.+.+|++++.++ +||||+++++++.... ..++||||++
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~lv~e~~~ 92 (319)
T 4euu_A 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKL-NHKNIVKLFAIEEETTTRHKVLIMEFCP 92 (319)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHC-CCTTBCCEEEEEECTTTCCEEEEEECCT
T ss_pred EEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhc-CCCCcceEEEEeecCCCceEEEEEeCCC
Confidence 4689999999999999865 7889999997543 2356788999999999 8999999999998765 6799999999
Q ss_pred CCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEe----cCCCCeEEeecCCCCCCC
Q 005693 465 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLI----NQDLDGCISDFGLTPLMN 540 (682)
Q Consensus 465 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl----~~~~~~kl~DfGla~~~~ 540 (682)
+|+|.+++..... ...+++..+..++.|++.||+|||+.+ |+||||||+||++ +.++.+||+|||+++...
T Consensus 93 ~~~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~ 167 (319)
T 4euu_A 93 CGSLYTVLEEPSN--AYGLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE 167 (319)
T ss_dssp TCBHHHHHHSGGG--TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEECTTSCEEEEECCCTTCEECC
T ss_pred CCCHHHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEEeccCCCCceEEEccCCCceecC
Confidence 9999999975432 233899999999999999999999998 9999999999999 788889999999997765
Q ss_pred CCC---CCCCCCcccCccccc--------cCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccc
Q 005693 541 VPA---TPSRSAGYRAPEVIE--------TRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWT 609 (682)
Q Consensus 541 ~~~---~~~~~~~y~aPE~~~--------~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~ 609 (682)
... ...+++.|+|||++. +..++.++|||||||++|||++|+.||........ ..............
T Consensus 168 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~--~~~~~~~~~~~~p~ 245 (319)
T 4euu_A 168 DDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRR--NKEVMYKIITGKPS 245 (319)
T ss_dssp TTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGG--CHHHHHHHHHHCCT
T ss_pred CCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccch--hHHHHHHHhcCCCc
Confidence 433 345788999999986 56789999999999999999999999975432221 12222222222111
Q ss_pred c---cc---------chhhhc-cccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhh
Q 005693 610 A---EV---------FDVELM-RFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQ 660 (682)
Q Consensus 610 ~---~~---------~d~~l~-~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~ 660 (682)
. .. +...+. ...........+.+++.+||+.||++|||++|++++..+-..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~~ 309 (319)
T 4euu_A 246 GAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH 309 (319)
T ss_dssp TCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHTC
T ss_pred ccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHhh
Confidence 0 00 000111 112234566677889999999999999999999999886553
No 60
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=1.9e-39 Score=345.84 Aligned_cols=238 Identities=24% Similarity=0.327 Sum_probs=193.6
Q ss_pred hccccccCeEEEEEEEEcC-CceEEEEEeeccc----cChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeecc
Q 005693 390 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 464 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~ 464 (682)
.+.||+|+||.||+|+.+. ++.||+|+++... ...+.+.+|.+++..+.+||||+++++++.+.+..++||||++
T Consensus 28 ~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~ 107 (353)
T 3txo_A 28 IRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVN 107 (353)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEEEeCCC
Confidence 4789999999999999764 7889999997642 2345677899999988789999999999999999999999999
Q ss_pred CCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCC---
Q 005693 465 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV--- 541 (682)
Q Consensus 465 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~--- 541 (682)
+|+|.+++... ..+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 108 gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~~ 179 (353)
T 3txo_A 108 GGDLMFHIQKS-----RRFDEARARFYAAEIISALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGV 179 (353)
T ss_dssp SCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCSCC---
T ss_pred CCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---CcccCCCHHHEEECCCCCEEEccccceeecccCCc
Confidence 99999999753 24899999999999999999999998 99999999999999999999999999986432
Q ss_pred -CCCCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhccc
Q 005693 542 -PATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 620 (682)
Q Consensus 542 -~~~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 620 (682)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||.+.... .....+...... ..
T Consensus 180 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~------~~~~~i~~~~~~---------~p 244 (353)
T 3txo_A 180 TTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENED------DLFEAILNDEVV---------YP 244 (353)
T ss_dssp ------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHCCCC---------CC
T ss_pred cccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHH------HHHHHHHcCCCC---------CC
Confidence 22446899999999999989999999999999999999999999765322 222222222110 01
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCCCH------HHHHH
Q 005693 621 QNIEEEMVQMLQIGMACVAKVPDMRPNM------DEVVR 653 (682)
Q Consensus 621 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~------~evl~ 653 (682)
.. ....+.+++.+|++.||++||++ +|+++
T Consensus 245 ~~---~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 245 TW---LHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp TT---SCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred CC---CCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 11 22345677789999999999998 77776
No 61
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=1.9e-39 Score=341.90 Aligned_cols=241 Identities=22% Similarity=0.337 Sum_probs=193.0
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeecccc--ChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccCC
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 466 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g 466 (682)
.+.||+|+||+||+|... +++.||+|++..... ..+.+.+|+.++..+ +||||+++++++.+++..++||||+++|
T Consensus 12 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~lv~e~~~~~ 90 (323)
T 3tki_A 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML-NHENVVKFYGHRREGNIQYLFLEYCSGG 90 (323)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEEECCTTE
T ss_pred eeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhC-CCCCCCeEEEEEecCCeEEEEEEcCCCC
Confidence 478999999999999976 578899999865432 246788999999999 8999999999999999999999999999
Q ss_pred chhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCC-----
Q 005693 467 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV----- 541 (682)
Q Consensus 467 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~----- 541 (682)
+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 91 ~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 162 (323)
T 3tki_A 91 ELFDRIEPD-----IGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162 (323)
T ss_dssp EGGGGSBTT-----TBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECEETTEEC
T ss_pred cHHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccchHHEEEeCCCCEEEEEeeccceeccCCccc
Confidence 999999743 34899999999999999999999998 99999999999999999999999999975432
Q ss_pred -CCCCCCCCcccCccccccCCC-CCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhcc
Q 005693 542 -PATPSRSAGYRAPEVIETRKH-SHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMR 619 (682)
Q Consensus 542 -~~~~~~~~~y~aPE~~~~~~~-~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 619 (682)
.....||+.|+|||++.+..+ +.++|||||||++|||++|+.||........ . ..........
T Consensus 163 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~----~~~~~~~~~~---------- 227 (323)
T 3tki_A 163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ-E----YSDWKEKKTY---------- 227 (323)
T ss_dssp CBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSH-H----HHHHHTTCTT----------
T ss_pred ccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHH-H----HHHHhccccc----------
Confidence 124568899999999987775 7789999999999999999999976442211 0 1111111000
Q ss_pred ccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 620 FQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 620 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
..........+.+++.+||+.||++|||++|++++
T Consensus 228 ~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 228 LNPWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp STTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CCccccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 00011223445678889999999999999999875
No 62
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=1.2e-38 Score=333.32 Aligned_cols=251 Identities=28% Similarity=0.450 Sum_probs=196.4
Q ss_pred hccccccCeEEEEEEEEcCCceEEEEEeeccccC---hhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccCC
Q 005693 390 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 466 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g 466 (682)
.+.||+|+||.||+|... ..+++|+++..... .+.+.+|++++.++ +||||+++++++. .+..++||||+++|
T Consensus 41 ~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~-~~~~~lv~e~~~~~ 116 (307)
T 3lb7_A 41 STRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKT-RHVNILLFMGYMT-KDNLAIVTQWCEGS 116 (307)
T ss_dssp EEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEC-SSSCEEEEECCSSC
T ss_pred EeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEc-cCcEEEEEecCCCC
Confidence 578999999999999864 45889888754333 35688899999999 8999999999864 56689999999999
Q ss_pred chhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCC-----
Q 005693 467 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV----- 541 (682)
Q Consensus 467 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~----- 541 (682)
+|.+++.... ..+++.++..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++....
T Consensus 117 ~L~~~l~~~~----~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~~ 189 (307)
T 3lb7_A 117 SLYKHLHVQE----TKFQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQ 189 (307)
T ss_dssp BHHHHHHTSC----CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCSSSEEECTTSCEEECCCCSSCC--------
T ss_pred cHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHhCC---EeeCCCChhhEEEcCCCCEEEccCCCceecccccccc
Confidence 9999997432 34899999999999999999999998 99999999999999999999999999976432
Q ss_pred -CCCCCCCCcccCccccc---cCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhh
Q 005693 542 -PATPSRSAGYRAPEVIE---TRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVEL 617 (682)
Q Consensus 542 -~~~~~~~~~y~aPE~~~---~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 617 (682)
.....+|+.|+|||++. +..++.++||||||+++|||++|+.||......+ ............. .+
T Consensus 190 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~------~~~~~~~~~~~~~----~~ 259 (307)
T 3lb7_A 190 QVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD------QIIFMVGRGYASP----DL 259 (307)
T ss_dssp ----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH------HHHHHHHHTCCCC----CS
T ss_pred cccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHH------HHHHHHhcCCCCc----ch
Confidence 12345789999999986 5668899999999999999999999997543221 1111111111111 00
Q ss_pred ccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCC
Q 005693 618 MRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 663 (682)
Q Consensus 618 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~~~ 663 (682)
.. ....+...+.+++.+||+.+|++||+++|+++.|+.+.+..+
T Consensus 260 ~~--~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~p 303 (307)
T 3lb7_A 260 SK--LYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLP 303 (307)
T ss_dssp TT--SCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTCC
T ss_pred hh--hhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhcc
Confidence 00 011223456778889999999999999999999999987654
No 63
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=1.1e-38 Score=346.02 Aligned_cols=246 Identities=19% Similarity=0.286 Sum_probs=190.4
Q ss_pred ccccccCeEEEEEEEEc-CCceEEEEEeeccccChhhHHHHHHHHHHhcCCCceeceEEEEEe----cCceEEEEeeccC
Q 005693 391 EVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYS----KDEKLLVYDYFAS 465 (682)
Q Consensus 391 ~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~----~~~~~lV~e~~~~ 465 (682)
+.||+|+||+||++... +++.||+|+++. ...+.+|++++.++.+||||+++++++.. ....++||||+++
T Consensus 68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~g 143 (400)
T 1nxk_A 68 QVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDG 143 (400)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEC----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCS
T ss_pred ceeeeccCeEEEEEEECCCCCEEEEEEeCc----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCCC
Confidence 57999999999999976 477899999864 35678889988777799999999999876 5678999999999
Q ss_pred CchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecC---CCCeEEeecCCCCCCCCC
Q 005693 466 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQ---DLDGCISDFGLTPLMNVP 542 (682)
Q Consensus 466 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~---~~~~kl~DfGla~~~~~~ 542 (682)
|+|.+++.... ...+++..+..++.||+.||+|||+.+ |+||||||+|||++. ++.+||+|||+++.....
T Consensus 144 g~L~~~l~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~ 217 (400)
T 1nxk_A 144 GELFSRIQDRG---DQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH 217 (400)
T ss_dssp EEHHHHHHCC------CCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSTTCCEEECCCTTCEECC--
T ss_pred CcHHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCcceEEEecCCCCccEEEEecccccccCCC
Confidence 99999997532 234899999999999999999999998 999999999999998 789999999999765432
Q ss_pred ---CCCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhcc
Q 005693 543 ---ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMR 619 (682)
Q Consensus 543 ---~~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 619 (682)
....+|+.|+|||++.+..++.++|||||||++|||++|+.||......+.... ....+....... ....
T Consensus 218 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~--~~~~i~~~~~~~-----~~~~ 290 (400)
T 1nxk_A 218 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPG--MKTRIRMGQYEF-----PNPE 290 (400)
T ss_dssp ---------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCS--HHHHHHHTCCCC-----CTTT
T ss_pred CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHH--HHHHHHcCcccC-----CCcc
Confidence 244578999999999999999999999999999999999999986543332110 111111111100 0001
Q ss_pred ccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 005693 620 FQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIE 656 (682)
Q Consensus 620 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~ 656 (682)
.. .....+.+++.+||+.||++|||++|++++-.
T Consensus 291 ~~---~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~ 324 (400)
T 1nxk_A 291 WS---EVSEEVKMLIRNLLKTEPTQRMTITEFMNHPW 324 (400)
T ss_dssp TT---TSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHH
T ss_pred cc---cCCHHHHHHHHHHCCCChhHCcCHHHHhcCcc
Confidence 11 22345667788999999999999999998543
No 64
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.8e-39 Score=348.30 Aligned_cols=252 Identities=23% Similarity=0.348 Sum_probs=200.7
Q ss_pred hccccccCeEEEEEEEEc------CCceEEEEEeecccc--ChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEe
Q 005693 390 AEVLGKGSYGTAYKAVLE------ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYD 461 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e 461 (682)
.+.||+|+||.||+|.+. ++..||||+++.... ...++.+|+.++.++ +||||+++++++.+....++|||
T Consensus 76 ~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~lv~e 154 (367)
T 3l9p_A 76 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF-NHQNIVRCIGVSLQSLPRFILLE 154 (367)
T ss_dssp EEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhC-CCCCCCeEEEEEecCCCCEEEEE
Confidence 478999999999999953 356799999975432 244688899999999 99999999999999999999999
Q ss_pred eccCCchhHhhccCCC--CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCC---CeEEeecCCC
Q 005693 462 YFASGSLSTLLHGNRG--AGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDL---DGCISDFGLT 536 (682)
Q Consensus 462 ~~~~g~L~~~l~~~~~--~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~---~~kl~DfGla 536 (682)
|+++|+|.+++..... .....+++.+++.++.||+.||+|||+.+ |+||||||+|||++.++ .+||+|||++
T Consensus 155 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~~~~kL~DFG~a 231 (367)
T 3l9p_A 155 LMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMA 231 (367)
T ss_dssp CCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEECCCHHH
T ss_pred eCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEEecCCCCceEEECCCccc
Confidence 9999999999975432 12245899999999999999999999998 99999999999999555 5999999998
Q ss_pred CCC------CCCCCCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccc
Q 005693 537 PLM------NVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWT 609 (682)
Q Consensus 537 ~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-g~~Pf~~~~~~~~~~l~~~~~~~~~~~~~ 609 (682)
+.. .......+|+.|+|||++.+..++.++|||||||++|||++ |..||...... .....+......
T Consensus 232 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~------~~~~~i~~~~~~ 305 (367)
T 3l9p_A 232 RDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ------EVLEFVTSGGRM 305 (367)
T ss_dssp HHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH------HHHHHHHTTCCC
T ss_pred cccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH------HHHHHHHcCCCC
Confidence 643 12223346788999999999999999999999999999998 99999754321 111111111100
Q ss_pred cccchhhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcC
Q 005693 610 AEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 662 (682)
Q Consensus 610 ~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~~ 662 (682)
.........+.+++.+||+.||++|||++|++++|+.+.+..
T Consensus 306 -----------~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~ 347 (367)
T 3l9p_A 306 -----------DPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 347 (367)
T ss_dssp -----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred -----------CCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhCh
Confidence 001122345677888999999999999999999999988654
No 65
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=1.3e-38 Score=338.51 Aligned_cols=246 Identities=19% Similarity=0.293 Sum_probs=194.3
Q ss_pred hccccccCeEEEEEEEEcC-CceEEEEEeeccccC----hhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeecc
Q 005693 390 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVVVG----KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 464 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~----~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~ 464 (682)
.+.||+|+||.||+|+.+. ++.||+|+++..... .+.+.+|..++.++.+||||+++++++.+++..++||||++
T Consensus 14 ~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~e~~~ 93 (345)
T 3a8x_A 14 LRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVN 93 (345)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred EEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEEeCCC
Confidence 4789999999999999864 678999999865432 23477888999888789999999999999999999999999
Q ss_pred CCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCC---
Q 005693 465 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV--- 541 (682)
Q Consensus 465 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~--- 541 (682)
+|+|.+++... ..+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 94 gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~~ 165 (345)
T 3a8x_A 94 GGDLMFHMQRQ-----RKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD 165 (345)
T ss_dssp SCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTTC
T ss_pred CCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCCCCEEEEeccccccccCCCC
Confidence 99999999743 24899999999999999999999998 99999999999999999999999999976432
Q ss_pred -CCCCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCC--ChhHHHHHHhhhccccccchhhhc
Q 005693 542 -PATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMV--DLPRWVQSVVREEWTAEVFDVELM 618 (682)
Q Consensus 542 -~~~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~--~l~~~~~~~~~~~~~~~~~d~~l~ 618 (682)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||......+.. .........+..... .
T Consensus 166 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~--------~ 237 (345)
T 3a8x_A 166 TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI--------R 237 (345)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCC--------C
T ss_pred cccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCC--------C
Confidence 23456899999999999999999999999999999999999999754322111 111111111111110 0
Q ss_pred cccChHHHHHHHHHHHHHcccCCCCCCCCH------HHHHHH
Q 005693 619 RFQNIEEEMVQMLQIGMACVAKVPDMRPNM------DEVVRM 654 (682)
Q Consensus 619 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~------~evl~~ 654 (682)
.... ....+.+++.+||+.||++||++ +|++++
T Consensus 238 ~p~~---~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~h 276 (345)
T 3a8x_A 238 IPRS---LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 276 (345)
T ss_dssp CCTT---SCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTS
T ss_pred CCCC---CCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcC
Confidence 1111 22346677789999999999995 677663
No 66
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=3.5e-39 Score=342.35 Aligned_cols=253 Identities=23% Similarity=0.401 Sum_probs=201.3
Q ss_pred hccccccCeEEEEEEEEcC------CceEEEEEeecccc--ChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEe
Q 005693 390 AEVLGKGSYGTAYKAVLEE------STTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYD 461 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~------~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e 461 (682)
.+.||+|+||.||+|+..+ ++.||+|+++.... ..+.+.+|++++.++ +||||+++++++.+++..++|||
T Consensus 52 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e 130 (343)
T 1luf_A 52 VRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEF-DNPNIVKLLGVCAVGKPMCLLFE 130 (343)
T ss_dssp EEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEccCCceEEEEe
Confidence 5789999999999999753 37899999975432 245688999999999 99999999999999999999999
Q ss_pred eccCCchhHhhccCCCC-------------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEe
Q 005693 462 YFASGSLSTLLHGNRGA-------------------GRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLI 522 (682)
Q Consensus 462 ~~~~g~L~~~l~~~~~~-------------------~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl 522 (682)
|+++|+|.+++...... ....+++.+++.++.||+.||+|||+.+ |+||||||+||++
T Consensus 131 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~ 207 (343)
T 1luf_A 131 YMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK---FVHRDLATRNCLV 207 (343)
T ss_dssp CCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEE
T ss_pred cCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEE
Confidence 99999999999764311 1246899999999999999999999998 9999999999999
Q ss_pred cCCCCeEEeecCCCCCCCC------CCCCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCCC
Q 005693 523 NQDLDGCISDFGLTPLMNV------PATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVD 595 (682)
Q Consensus 523 ~~~~~~kl~DfGla~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-g~~Pf~~~~~~~~~~ 595 (682)
+.++.+||+|||+++.... .....+++.|+|||++.+..++.++||||||+++|||+| |..||.+....
T Consensus 208 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~---- 283 (343)
T 1luf_A 208 GENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHE---- 283 (343)
T ss_dssp CGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH----
T ss_pred CCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCChH----
Confidence 9999999999999865422 223446788999999998899999999999999999999 99999754321
Q ss_pred hhHHHHHHhhhccccccchhhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCC
Q 005693 596 LPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 663 (682)
Q Consensus 596 l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~~~ 663 (682)
.....+.... ... ........+.+++.+||+.||++|||++|++++|+++.+...
T Consensus 284 --~~~~~~~~~~-~~~----------~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~~ 338 (343)
T 1luf_A 284 --EVIYYVRDGN-ILA----------CPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERAE 338 (343)
T ss_dssp --HHHHHHHTTC-CCC----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC---
T ss_pred --HHHHHHhCCC-cCC----------CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhhh
Confidence 1111111111 100 011223456778889999999999999999999999886554
No 67
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.3e-38 Score=334.08 Aligned_cols=242 Identities=23% Similarity=0.377 Sum_probs=196.6
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeecccc-------ChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEe
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV-------GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYD 461 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-------~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e 461 (682)
.+.||+|+||.||+|... +++.||+|+++.... ..+.+.+|+.++.++ +||||+++++++.+.+..++|||
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e 94 (326)
T 2y0a_A 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI-QHPNVITLHEVYENKTDVILILE 94 (326)
T ss_dssp EEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEEE
T ss_pred ceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhC-CCCCCCcEEEEEEeCCEEEEEEE
Confidence 578999999999999976 478899999975432 246789999999999 89999999999999999999999
Q ss_pred eccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCC----CeEEeecCCCC
Q 005693 462 YFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDL----DGCISDFGLTP 537 (682)
Q Consensus 462 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~----~~kl~DfGla~ 537 (682)
|+++|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++ .+||+|||+++
T Consensus 95 ~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~ 166 (326)
T 2y0a_A 95 LVAGGELFDFLAEK-----ESLTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166 (326)
T ss_dssp CCCSCBHHHHHTTS-----SCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred cCCCCCHHHHHHhc-----CCcCHHHHHHHHHHHHHHHHHHHHCC---eEcCCCCHHHEEEecCCCCCCCEEEEECCCCe
Confidence 99999999999642 34899999999999999999999998 99999999999999887 79999999997
Q ss_pred CCCCC---CCCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccch
Q 005693 538 LMNVP---ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFD 614 (682)
Q Consensus 538 ~~~~~---~~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 614 (682)
..... ....+|+.|+|||++.+..++.++|||||||++|||++|+.||.+.... ............ +.
T Consensus 167 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~------~~~~~~~~~~~~---~~ 237 (326)
T 2y0a_A 167 KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ------ETLANVSAVNYE---FE 237 (326)
T ss_dssp ECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH------HHHHHHHHTCCC---CC
T ss_pred ECCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH------HHHHHHHhcCCC---cC
Confidence 66432 2345889999999999999999999999999999999999999754321 111111111100 00
Q ss_pred hhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 615 VELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 615 ~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
.. ... .....+.+++.+||+.||++|||++|++++
T Consensus 238 ~~--~~~---~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 238 DE--YFS---NTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp HH--HHT---TSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred cc--ccc---cCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 00 001 122346677889999999999999999974
No 68
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=8.9e-39 Score=338.20 Aligned_cols=238 Identities=21% Similarity=0.322 Sum_probs=194.7
Q ss_pred hccccccCeEEEEEEEE-cCCceEEEEEeeccc----cChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeecc
Q 005693 390 AEVLGKGSYGTAYKAVL-EESTTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 464 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~ 464 (682)
.+.||+|+||.||+|.. .+++.||+|++.... .....+.+|+++++.+ +||||+++++++...+..++||||+
T Consensus 14 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~lv~E~~- 91 (336)
T 3h4j_B 14 RETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLL-RHPHIIKLYDVITTPTDIVMVIEYA- 91 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEECCC-
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhC-CCCCCCeEEEEEEeCCEEEEEEECC-
Confidence 47899999999999997 457889999987542 2245788999999998 8999999999999999999999999
Q ss_pred CCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCC--
Q 005693 465 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP-- 542 (682)
Q Consensus 465 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~-- 542 (682)
+|+|.+++... ..+++.++..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||++......
T Consensus 92 ~g~l~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~ 163 (336)
T 3h4j_B 92 GGELFDYIVEK-----KRMTEDEGRRFFQQIICAIEYCHRHK---IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNF 163 (336)
T ss_dssp CEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSBT
T ss_pred CCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCchhhEEEcCCCCEEEEEeccceeccCCcc
Confidence 78999988643 24899999999999999999999998 999999999999999999999999999876543
Q ss_pred -CCCCCCCcccCccccccCCC-CCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhccc
Q 005693 543 -ATPSRSAGYRAPEVIETRKH-SHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 620 (682)
Q Consensus 543 -~~~~~~~~y~aPE~~~~~~~-~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 620 (682)
....||+.|+|||++.+..+ +.++|||||||++|||++|+.||.+....+.... +........
T Consensus 164 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~---------------i~~~~~~~p 228 (336)
T 3h4j_B 164 LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKK---------------VNSCVYVMP 228 (336)
T ss_dssp TCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCC---------------CCSSCCCCC
T ss_pred cccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHH---------------HHcCCCCCc
Confidence 34568999999999988776 7899999999999999999999986543332110 000000011
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 005693 621 QNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMI 655 (682)
Q Consensus 621 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L 655 (682)
.. ....+.+++.+||+.||++|||++|++++-
T Consensus 229 ~~---~s~~~~~li~~~L~~dP~~Rpt~~eil~hp 260 (336)
T 3h4j_B 229 DF---LSPGAQSLIRRMIVADPMQRITIQEIRRDP 260 (336)
T ss_dssp TT---SCHHHHHHHHTTSCSSGGGSCCHHHHTTCH
T ss_pred cc---CCHHHHHHHHHHcCCChhHCcCHHHHHhCh
Confidence 11 223456778899999999999999999853
No 69
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=7.3e-39 Score=343.26 Aligned_cols=256 Identities=18% Similarity=0.216 Sum_probs=193.0
Q ss_pred hccccccCeEEEEEEEEcCC------ceEEEEEeeccccChhhHHHHHHHHHHhc--------------CCCceeceEEE
Q 005693 390 AEVLGKGSYGTAYKAVLEES------TTVVVKRLKEVVVGKRDFEQQMEIVGRVG--------------QHPNVVPLRAY 449 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~~------~~vavK~l~~~~~~~~~~~~e~~~l~~l~--------------~h~niv~l~~~ 449 (682)
.+.||+|+||.||+|.+..+ +.||+|++.... ..+.+|++++.++. +|+||++++++
T Consensus 40 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~ 116 (364)
T 3op5_A 40 GLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDN---GPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGS 116 (364)
T ss_dssp EEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTC---HHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEEE
T ss_pred EEEEecCCCeEEEEeeecCccccccccceEEEEeeccc---hhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEee
Confidence 47899999999999998653 679999986542 23444444444332 59999999999
Q ss_pred EEec----CceEEEEeeccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEec--
Q 005693 450 YYSK----DEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLIN-- 523 (682)
Q Consensus 450 ~~~~----~~~~lV~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~-- 523 (682)
+... ...++||||+ +|+|.+++.... ..+++..++.++.||+.||+|||+.+ |+||||||+|||++
T Consensus 117 ~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~----~~l~~~~~~~i~~qi~~~l~~lH~~~---iiHrDlkp~Nill~~~ 188 (364)
T 3op5_A 117 GLHDKNGKSYRFMIMDRF-GSDLQKIYEANA----KRFSRKTVLQLSLRILDILEYIHEHE---YVHGDIKASNLLLNYK 188 (364)
T ss_dssp EEEEETTEEEEEEEEECE-EEEHHHHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEESS
T ss_pred eeeccCCcceEEEEEeCC-CCCHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEEecCCHHHEEEecC
Confidence 9775 3479999999 999999997532 34999999999999999999999998 99999999999999
Q ss_pred CCCCeEEeecCCCCCCCCC-----------CCCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCC
Q 005693 524 QDLDGCISDFGLTPLMNVP-----------ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDD 592 (682)
Q Consensus 524 ~~~~~kl~DfGla~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~ 592 (682)
.++.+||+|||+++..... ....+|+.|+|||++.+..++.++|||||||++|||+||+.||.+.....
T Consensus 189 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~ 268 (364)
T 3op5_A 189 NPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDP 268 (364)
T ss_dssp CTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCH
T ss_pred CCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCH
Confidence 8899999999999654321 22348899999999999999999999999999999999999998543221
Q ss_pred CCChhHHHHHHhhhccccccchhhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCC
Q 005693 593 MVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 663 (682)
Q Consensus 593 ~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~~~ 663 (682)
............ ......+..+.. . .....+.+++..||+.+|++||+++++++.|+++.+...
T Consensus 269 --~~~~~~~~~~~~-~~~~~~~~~~~~-~---~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~ 332 (364)
T 3op5_A 269 --KYVRDSKIRYRE-NIASLMDKCFPA-A---NAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIG 332 (364)
T ss_dssp --HHHHHHHHHHHH-CHHHHHHHHSCT-T---CCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred --HHHHHHHHHhhh-hHHHHHHHhccc-c---cCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcC
Confidence 111111111111 111111211100 1 123456777889999999999999999999999886543
No 70
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.9e-39 Score=342.36 Aligned_cols=257 Identities=23% Similarity=0.341 Sum_probs=200.6
Q ss_pred hccccccCeEEEEEEEEc------CCceEEEEEeeccc--cChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEe
Q 005693 390 AEVLGKGSYGTAYKAVLE------ESTTVVVKRLKEVV--VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYD 461 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e 461 (682)
.+.||+|+||.||+|... ++..||+|+++... ...+.+.+|+.++.++.+||||+++++++...+..++|||
T Consensus 50 ~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e 129 (344)
T 1rjb_A 50 GKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFE 129 (344)
T ss_dssp EEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCccEEEEe
Confidence 578999999999999962 34579999997543 2346789999999999889999999999999999999999
Q ss_pred eccCCchhHhhccCCCC------------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEec
Q 005693 462 YFASGSLSTLLHGNRGA------------------GRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLIN 523 (682)
Q Consensus 462 ~~~~g~L~~~l~~~~~~------------------~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~ 523 (682)
|+++|+|.+++...... ....+++..+..++.|++.||+|||+.+ |+||||||+||+++
T Consensus 130 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~ 206 (344)
T 1rjb_A 130 YCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS---CVHRDLAARNVLVT 206 (344)
T ss_dssp CCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT---EEETTCSGGGEEEE
T ss_pred cCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChhhEEEc
Confidence 99999999999764321 0134799999999999999999999998 99999999999999
Q ss_pred CCCCeEEeecCCCCCCCCCCC------CCCCCcccCccccccCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCCCh
Q 005693 524 QDLDGCISDFGLTPLMNVPAT------PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDL 596 (682)
Q Consensus 524 ~~~~~kl~DfGla~~~~~~~~------~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-g~~Pf~~~~~~~~~~l 596 (682)
.++.+||+|||++........ ..+++.|+|||++.+..++.++||||||+++|||+| |..||.+....+
T Consensus 207 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~---- 282 (344)
T 1rjb_A 207 HGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDA---- 282 (344)
T ss_dssp TTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH----
T ss_pred CCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHH----
Confidence 999999999999976543322 234678999999999999999999999999999998 999997654221
Q ss_pred hHHHHHHhhhccccccchhhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCCCC
Q 005693 597 PRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSEN 665 (682)
Q Consensus 597 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~~~~~ 665 (682)
............. ........+.+++.+||+.||++|||++|++++|+.+.+...+.
T Consensus 283 --~~~~~~~~~~~~~----------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~~ 339 (344)
T 1rjb_A 283 --NFYKLIQNGFKMD----------QPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAEEA 339 (344)
T ss_dssp --HHHHHHHTTCCCC----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC------
T ss_pred --HHHHHHhcCCCCC----------CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHHHHH
Confidence 1112222211110 01112345677888999999999999999999999998776654
No 71
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-38 Score=335.26 Aligned_cols=238 Identities=19% Similarity=0.285 Sum_probs=196.8
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeeccc----cChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeecc
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 464 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~ 464 (682)
.+.||+|+||.||+++.. +++.||+|+++... ...+.+.+|..++..+ +||||+++++++.+.+..++||||++
T Consensus 11 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~Iv~~~~~~~~~~~~~lv~e~~~ 89 (318)
T 1fot_A 11 LRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV-THPFIIRMWGTFQDAQQIFMIMDYIE 89 (318)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC-CBTTBCCEEEEEECSSEEEEEECCCC
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhC-CCCCCceEeEEEEeCCEEEEEEeCCC
Confidence 478999999999999976 57889999997642 2345677899999988 99999999999999999999999999
Q ss_pred CCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCC-C
Q 005693 465 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP-A 543 (682)
Q Consensus 465 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~-~ 543 (682)
+|+|.+++... ..+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 90 gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~~ 161 (318)
T 1fot_A 90 GGELFSLLRKS-----QRFPNPVAKFYAAEVCLALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTY 161 (318)
T ss_dssp SCBHHHHHHHT-----SSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECTTSCEEECCCSSCEECSSCBC
T ss_pred CCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChheEEEcCCCCEEEeecCcceecCCccc
Confidence 99999999753 24899999999999999999999998 999999999999999999999999999765443 3
Q ss_pred CCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhccccCh
Q 005693 544 TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNI 623 (682)
Q Consensus 544 ~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~ 623 (682)
...||+.|+|||++.+..++.++|||||||++|||++|+.||.+... ......+..... ......
T Consensus 162 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~------~~~~~~i~~~~~---------~~p~~~ 226 (318)
T 1fot_A 162 TLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT------MKTYEKILNAEL---------RFPPFF 226 (318)
T ss_dssp CCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHHHHHHCCC---------CCCTTS
T ss_pred cccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH------HHHHHHHHhCCC---------CCCCCC
Confidence 45689999999999999999999999999999999999999975431 122222222211 011112
Q ss_pred HHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 005693 624 EEEMVQMLQIGMACVAKVPDMRP-----NMDEVVRM 654 (682)
Q Consensus 624 ~~~~~~l~~l~~~Cl~~dP~~RP-----t~~evl~~ 654 (682)
...+.+++.+|++.||++|| +++|++++
T Consensus 227 ---~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~h 259 (318)
T 1fot_A 227 ---NEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH 259 (318)
T ss_dssp ---CHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred ---CHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcC
Confidence 23456777799999999999 89999863
No 72
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=1e-38 Score=341.64 Aligned_cols=245 Identities=20% Similarity=0.301 Sum_probs=190.8
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeeccccChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccCCch
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL 468 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~L 468 (682)
.+.||+|+||+||+++.. +++.||+|++.......+.+.+|+.+++++ +||||+++++++.+.+..++||||+++|+|
T Consensus 25 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~~~~~~L 103 (361)
T 3uc3_A 25 VKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSL-RHPNIVRFKEVILTPTHLAIIMEYASGGEL 103 (361)
T ss_dssp EEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEEECCCSCBH
T ss_pred EEEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhC-CCCCCCcEEEEEeeCCEEEEEEEeCCCCCH
Confidence 468999999999999986 578899999987666667889999999999 899999999999999999999999999999
Q ss_pred hHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCC--eEEeecCCCCCCCC---CC
Q 005693 469 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLD--GCISDFGLTPLMNV---PA 543 (682)
Q Consensus 469 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~--~kl~DfGla~~~~~---~~ 543 (682)
.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++. +||+|||+++.... ..
T Consensus 104 ~~~l~~~-----~~~~~~~~~~i~~ql~~~L~~LH~~~---ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~~~ 175 (361)
T 3uc3_A 104 YERICNA-----GRFSEDEARFFFQQLLSGVSYCHSMQ---ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPK 175 (361)
T ss_dssp HHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CCSCCCCGGGEEECSSSSCCEEECCCCCC----------
T ss_pred HHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCceEEEeecCccccccccCCCC
Confidence 9999643 24899999999999999999999998 999999999999987765 99999999875432 23
Q ss_pred CCCCCCcccCccccccCCCCCc-chHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhccccC
Q 005693 544 TPSRSAGYRAPEVIETRKHSHK-SDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQN 622 (682)
Q Consensus 544 ~~~~~~~y~aPE~~~~~~~~~~-sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~ 622 (682)
...+|+.|+|||++.+..++.+ +|||||||++|||++|+.||.+..... ................ .....
T Consensus 176 ~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~--~~~~~~~~~~~~~~~~-------~~~~~ 246 (361)
T 3uc3_A 176 STVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPR--DYRKTIQRILSVKYSI-------PDDIR 246 (361)
T ss_dssp -----CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CC--CHHHHHHHHHTTCCCC-------CTTSC
T ss_pred CCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHH--HHHHHHHHHhcCCCCC-------CCcCC
Confidence 4468999999999988887665 899999999999999999998654322 2222233222221110 00111
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 005693 623 IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMI 655 (682)
Q Consensus 623 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L 655 (682)
....+.+++.+||+.||++|||++|++++-
T Consensus 247 ---~s~~~~~li~~~L~~dP~~Rps~~ell~hp 276 (361)
T 3uc3_A 247 ---ISPECCHLISRIFVADPATRISIPEIKTHS 276 (361)
T ss_dssp ---CCHHHHHHHHHHSCSCTTTSCCHHHHHTSH
T ss_pred ---CCHHHHHHHHHHccCChhHCcCHHHHHhCc
Confidence 123456778899999999999999999863
No 73
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.6e-38 Score=332.45 Aligned_cols=253 Identities=27% Similarity=0.412 Sum_probs=194.6
Q ss_pred hccccccCeEEEEEEEEcCCceEEEEEeeccccChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccCCchh
Q 005693 390 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLS 469 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~L~ 469 (682)
.+.||+|+||+||+|+.. ++.||+|++... ...+.+.+|++++.++ +||||+++++++. +..++||||+++|+|.
T Consensus 13 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~--~~~~lv~e~~~~~~L~ 87 (307)
T 2eva_A 13 EEVVGRGAFGVVCKAKWR-AKDVAIKQIESE-SERKAFIVELRQLSRV-NHPNIVKLYGACL--NPVCLVMEYAEGGSLY 87 (307)
T ss_dssp EEEEECCSSSEEEEEEET-TEEEEEEECSST-THHHHHHHHHHHHHHC-CCTTBCCEEEBCT--TTTEEEEECCTTCBHH
T ss_pred eeEeecCCCceEEEEEEC-CeeEEEEEecCh-hHHHHHHHHHHHHhcC-CCCCcCeEEEEEc--CCcEEEEEcCCCCCHH
Confidence 478999999999999986 788999998643 2356789999999999 9999999999876 4589999999999999
Q ss_pred HhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCC-eEEeecCCCCCCCCC-CCCCC
Q 005693 470 TLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLD-GCISDFGLTPLMNVP-ATPSR 547 (682)
Q Consensus 470 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~-~kl~DfGla~~~~~~-~~~~~ 547 (682)
+++..... ...+++..++.++.|+++||+|||+.+..+|+||||||+||+++.++. +||+|||++...... ....+
T Consensus 88 ~~l~~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~~~~~g 165 (307)
T 2eva_A 88 NVLHGAEP--LPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKG 165 (307)
T ss_dssp HHHHCSSS--EECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC------------C
T ss_pred HHHhccCC--CCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccccccCCC
Confidence 99975431 234788999999999999999999932223999999999999998887 799999999765433 23457
Q ss_pred CCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhccccChHHHH
Q 005693 548 SAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEM 627 (682)
Q Consensus 548 ~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 627 (682)
++.|+|||++.+..++.++||||||+++|||++|+.||....... ......... ..... ......
T Consensus 166 t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~----~~~~~~~~~-~~~~~----------~~~~~~ 230 (307)
T 2eva_A 166 SAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPA----FRIMWAVHN-GTRPP----------LIKNLP 230 (307)
T ss_dssp CTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSH----HHHHHHHHT-TCCCC----------CBTTCC
T ss_pred CCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccH----HHHHHHHhc-CCCCC----------cccccC
Confidence 899999999999999999999999999999999999997543211 111111111 10000 011223
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCCC
Q 005693 628 VQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSE 664 (682)
Q Consensus 628 ~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~~~~ 664 (682)
..+.+++.+||+.||++|||++|+++.|+.+.+....
T Consensus 231 ~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~ 267 (307)
T 2eva_A 231 KPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPG 267 (307)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCCC
T ss_pred HHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhccC
Confidence 4567788899999999999999999999999876544
No 74
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=2.1e-38 Score=347.58 Aligned_cols=242 Identities=20% Similarity=0.323 Sum_probs=194.8
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeecccc---ChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccC
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV---GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 465 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~ 465 (682)
.+.||+|+||.||+|... +++.+|+|++..... ..+.+.+|+++++.+ +||||+++++++.+++..++||||+++
T Consensus 16 ~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lv~E~~~g 94 (444)
T 3soa_A 16 FEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLL-KHPNIVRLHDSISEEGHHYLIFDLVTG 94 (444)
T ss_dssp EEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHC-CBTTBCCEEEEEECSSEEEEEECCCBC
T ss_pred EEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhC-CCcCCCeEEEEEEECCEEEEEEEeCCC
Confidence 578999999999999875 578899999876543 235688999999999 999999999999999999999999999
Q ss_pred CchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEec---CCCCeEEeecCCCCCCCCC
Q 005693 466 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLIN---QDLDGCISDFGLTPLMNVP 542 (682)
Q Consensus 466 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~---~~~~~kl~DfGla~~~~~~ 542 (682)
|+|.+.+... ..+++..+..++.||+.||+|||+++ |+||||||+|||++ +++.+||+|||++......
T Consensus 95 g~L~~~i~~~-----~~~~e~~~~~i~~qil~aL~~lH~~g---ivHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~ 166 (444)
T 3soa_A 95 GELFEDIVAR-----EYYSEADASHCIQQILEAVLHCHQMG---VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGE 166 (444)
T ss_dssp CBHHHHHHHC-----SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTT
T ss_pred CCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEeccCCCCcEEEccCceeEEecCC
Confidence 9999998753 34899999999999999999999998 99999999999998 4678999999999776543
Q ss_pred C----CCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhc
Q 005693 543 A----TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELM 618 (682)
Q Consensus 543 ~----~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 618 (682)
. ...||+.|+|||++.+..++.++||||+||++|+|++|..||.+.... .....+...... ....
T Consensus 167 ~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~------~~~~~i~~~~~~-----~~~~ 235 (444)
T 3soa_A 167 QQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQH------RLYQQIKAGAYD-----FPSP 235 (444)
T ss_dssp CCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHH------HHHHHHHHTCCC-----CCTT
T ss_pred CceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHH------HHHHHHHhCCCC-----CCcc
Confidence 2 346899999999999999999999999999999999999999754321 122222221111 0001
Q ss_pred cccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 619 RFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 619 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
..... ...+.+++.+||+.||++|||++|++++
T Consensus 236 ~~~~~---s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 236 EWDTV---TPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp TTTTS---CHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred ccccC---CHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 11122 3346677779999999999999999984
No 75
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=9.7e-39 Score=340.57 Aligned_cols=244 Identities=16% Similarity=0.294 Sum_probs=195.4
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeeccc------cChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEee
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV------VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDY 462 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~------~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~ 462 (682)
.+.||+|+||+||+|... +++.||+|++.... ...+.+.+|++++..+ +||||+++++++.+++..++||||
T Consensus 29 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~lv~e~ 107 (351)
T 3c0i_A 29 CEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML-KHPHIVELLETYSSDGMLYMVFEF 107 (351)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEEC
T ss_pred eeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhC-CCCCCCcEEEEEEeCCEEEEEEeC
Confidence 578999999999999975 57889999986432 1356789999999999 899999999999999999999999
Q ss_pred ccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCC---eEEeecCCCCCC
Q 005693 463 FASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLD---GCISDFGLTPLM 539 (682)
Q Consensus 463 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~---~kl~DfGla~~~ 539 (682)
+++|+|.+++..... ....+++..+..++.||+.||+|||+++ |+||||||+|||++.++. +||+|||++...
T Consensus 108 ~~g~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~ 183 (351)
T 3c0i_A 108 MDGADLCFEIVKRAD-AGFVYSEAVASHYMRQILEALRYCHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL 183 (351)
T ss_dssp CSSCBHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECSSSTTCCEEECCCTTCEEC
T ss_pred CCCCCHHHHHHHhcc-cCCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChHHeEEecCCCCCcEEEecCcceeEe
Confidence 999999888764321 1234899999999999999999999998 999999999999987655 999999999776
Q ss_pred CCCC----CCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchh
Q 005693 540 NVPA----TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDV 615 (682)
Q Consensus 540 ~~~~----~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 615 (682)
.... ...+|+.|+|||++.+..++.++|||||||++|||++|+.||.+.. ......+...... ...
T Consensus 184 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~-------~~~~~~i~~~~~~---~~~ 253 (351)
T 3c0i_A 184 GESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK-------ERLFEGIIKGKYK---MNP 253 (351)
T ss_dssp CTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH-------HHHHHHHHHTCCC---CCH
T ss_pred cCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH-------HHHHHHHHcCCCC---CCc
Confidence 5432 3458999999999999999999999999999999999999997532 1111222211111 000
Q ss_pred hhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005693 616 ELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVR 653 (682)
Q Consensus 616 ~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 653 (682)
..... ....+.+++.+||+.||++|||+.|+++
T Consensus 254 --~~~~~---~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 254 --RQWSH---ISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp --HHHTT---SCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred --ccccc---CCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 00111 2345667788999999999999999987
No 76
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=5.2e-39 Score=336.42 Aligned_cols=255 Identities=25% Similarity=0.406 Sum_probs=205.2
Q ss_pred hccccccCeEEEEEEEE------cCCceEEEEEeecccc--ChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEe
Q 005693 390 AEVLGKGSYGTAYKAVL------EESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYD 461 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~------~~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e 461 (682)
.+.||+|+||.||+|.. .+++.||+|+++.... ..+.+.+|++++.++.+||||+++++++..++..++|||
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e 107 (313)
T 1t46_A 28 GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITE 107 (313)
T ss_dssp EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred HHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCcEEEEe
Confidence 57899999999999985 2356899999975432 246788999999999889999999999999999999999
Q ss_pred eccCCchhHhhccCCCC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCe
Q 005693 462 YFASGSLSTLLHGNRGA-------------GRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDG 528 (682)
Q Consensus 462 ~~~~g~L~~~l~~~~~~-------------~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~ 528 (682)
|+++|+|.+++...... ....+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+
T Consensus 108 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~ 184 (313)
T 1t46_A 108 YCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRIT 184 (313)
T ss_dssp CCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEETTTEE
T ss_pred cCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCccceEEEcCCCCE
Confidence 99999999999764321 1234899999999999999999999998 9999999999999999999
Q ss_pred EEeecCCCCCCCCCCC------CCCCCcccCccccccCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHH
Q 005693 529 CISDFGLTPLMNVPAT------PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQ 601 (682)
Q Consensus 529 kl~DfGla~~~~~~~~------~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-g~~Pf~~~~~~~~~~l~~~~~ 601 (682)
||+|||++........ ..+++.|+|||++.+..++.++||||||+++|||+| |+.||.+....+ ...
T Consensus 185 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~------~~~ 258 (313)
T 1t46_A 185 KICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS------KFY 258 (313)
T ss_dssp EECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH------HHH
T ss_pred EEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchh------HHH
Confidence 9999999987654332 224667999999999999999999999999999999 999997654221 111
Q ss_pred HHhhhccccccchhhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCC
Q 005693 602 SVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 663 (682)
Q Consensus 602 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~~~ 663 (682)
....+..... ........+.+++.+||+.||++|||++|++++|+++.....
T Consensus 259 ~~~~~~~~~~----------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 310 (313)
T 1t46_A 259 KMIKEGFRML----------SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISEST 310 (313)
T ss_dssp HHHHHTCCCC----------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTC
T ss_pred HHhccCCCCC----------CcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHhh
Confidence 1222111100 011223456778889999999999999999999999887543
No 77
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=2.1e-38 Score=339.20 Aligned_cols=242 Identities=21% Similarity=0.327 Sum_probs=196.2
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeeccccC---hhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccC
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 465 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~ 465 (682)
.+.||+|+||.||+|... +++.||+|++...... .+.+.+|++++.++ +||||+++++++.+++..++||||+++
T Consensus 34 ~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~lv~e~~~g 112 (362)
T 2bdw_A 34 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL-QHPNIVRLHDSIQEESFHYLVFDLVTG 112 (362)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred eeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEeCCEEEEEEecCCC
Confidence 578999999999999975 4788999999765433 34678899999999 899999999999999999999999999
Q ss_pred CchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCC---CeEEeecCCCCCCCCC
Q 005693 466 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDL---DGCISDFGLTPLMNVP 542 (682)
Q Consensus 466 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~---~~kl~DfGla~~~~~~ 542 (682)
|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++ .+||+|||++......
T Consensus 113 g~L~~~l~~~-----~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~ 184 (362)
T 2bdw_A 113 GELFEDIVAR-----EFYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 184 (362)
T ss_dssp CBHHHHHTTC-----SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTC
T ss_pred CCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCCCCCCEEEeecCcceEecCC
Confidence 9999998643 34899999999999999999999998 99999999999998654 5999999999876543
Q ss_pred C---CCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhcc
Q 005693 543 A---TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMR 619 (682)
Q Consensus 543 ~---~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 619 (682)
. ...+|+.|+|||++.+..++.++|||||||++|||++|+.||.+... ......+....... ....
T Consensus 185 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~------~~~~~~i~~~~~~~-----~~~~ 253 (362)
T 2bdw_A 185 EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ------HRLYAQIKAGAYDY-----PSPE 253 (362)
T ss_dssp CSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHTCCCC-----CTTG
T ss_pred cccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH------HHHHHHHHhCCCCC-----Cccc
Confidence 3 34689999999999998999999999999999999999999975432 12222222211110 0001
Q ss_pred ccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 620 FQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 620 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
. ......+.+++.+||+.||++|||++|++++
T Consensus 254 ~---~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 254 W---DTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp G---GGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred c---cCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 1 1123456677789999999999999999874
No 78
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=6.9e-39 Score=333.50 Aligned_cols=239 Identities=21% Similarity=0.328 Sum_probs=187.3
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeecccc---------------------------ChhhHHHHHHHHHHhcCCC
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV---------------------------GKRDFEQQMEIVGRVGQHP 441 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---------------------------~~~~~~~e~~~l~~l~~h~ 441 (682)
.+.||+|+||.||+|... +++.||+|++..... ..+.+.+|++++.++ +||
T Consensus 18 ~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~ 96 (298)
T 2zv2_A 18 KDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKL-DHP 96 (298)
T ss_dssp EEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTC-CCT
T ss_pred EeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhC-CCC
Confidence 468999999999999975 477899999865431 124688999999999 899
Q ss_pred ceeceEEEEEe--cCceEEEEeeccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCC
Q 005693 442 NVVPLRAYYYS--KDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASN 519 (682)
Q Consensus 442 niv~l~~~~~~--~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~N 519 (682)
||+++++++.+ .+..++||||+++|+|.+++. ...+++..+..++.|++.||+|||+.+ |+||||||+|
T Consensus 97 ~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~------~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~N 167 (298)
T 2zv2_A 97 NVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT------LKPLSEDQARFYFQDLIKGIEYLHYQK---IIHRDIKPSN 167 (298)
T ss_dssp TBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC------SSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGG
T ss_pred CCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh------cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHH
Confidence 99999999986 567899999999999988764 234899999999999999999999998 9999999999
Q ss_pred eEecCCCCeEEeecCCCCCCCCC----CCCCCCCcccCccccccCC---CCCcchHHHHHHHHHHHHhCCCCCCCCCCCC
Q 005693 520 VLINQDLDGCISDFGLTPLMNVP----ATPSRSAGYRAPEVIETRK---HSHKSDVYSFGVLLLEMLTGKAPLQSPTRDD 592 (682)
Q Consensus 520 ILl~~~~~~kl~DfGla~~~~~~----~~~~~~~~y~aPE~~~~~~---~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~ 592 (682)
|+++.++.+||+|||+++..... ....+|+.|+|||++.+.. ++.++|||||||++|||++|+.||....
T Consensus 168 il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~--- 244 (298)
T 2zv2_A 168 LLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER--- 244 (298)
T ss_dssp EEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSS---
T ss_pred EEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCcc---
Confidence 99999999999999999765433 2346889999999997765 3778999999999999999999997532
Q ss_pred CCChhHHHHHHhhhccccccchhhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 593 MVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 593 ~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
.............. ...... ....+.+++.+||+.||++|||++|++++
T Consensus 245 ---~~~~~~~~~~~~~~-------~~~~~~---~~~~l~~li~~~l~~dp~~R~s~~e~l~h 293 (298)
T 2zv2_A 245 ---IMCLHSKIKSQALE-------FPDQPD---IAEDLKDLITRMLDKNPESRIVVPEIKLH 293 (298)
T ss_dssp ---HHHHHHHHHHCCCC-------CCSSSC---CCHHHHHHHHHHTCSCTTTSCCHHHHTTC
T ss_pred ---HHHHHHHHhcccCC-------CCCccc---cCHHHHHHHHHHhhcChhhCCCHHHHhcC
Confidence 11112221111110 001111 22356677789999999999999999764
No 79
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=5.4e-39 Score=341.09 Aligned_cols=238 Identities=22% Similarity=0.353 Sum_probs=194.8
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeeccc----cChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeecc
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 464 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~ 464 (682)
.+.||+|+||.||+|+.+ +++.||+|+++... ...+.+..|.+++..+.+||||+++++++.+.+..++||||++
T Consensus 22 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~ 101 (345)
T 1xjd_A 22 HKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLN 101 (345)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEEEeCCC
Confidence 478999999999999986 47789999997642 2345677888898887799999999999999999999999999
Q ss_pred CCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCC---
Q 005693 465 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV--- 541 (682)
Q Consensus 465 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~--- 541 (682)
+|+|.+++... ..+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 102 gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~ 173 (345)
T 1xjd_A 102 GGDLMYHIQSC-----HKFDLSRATFYAAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDA 173 (345)
T ss_dssp TCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC
T ss_pred CCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCChhhEEECCCCCEEEeEChhhhhcccCCC
Confidence 99999999743 24899999999999999999999998 99999999999999999999999999976432
Q ss_pred -CCCCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhccc
Q 005693 542 -PATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 620 (682)
Q Consensus 542 -~~~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 620 (682)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||.+.... .....+...... ..
T Consensus 174 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~------~~~~~i~~~~~~---------~p 238 (345)
T 1xjd_A 174 KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE------ELFHSIRMDNPF---------YP 238 (345)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHCCCC---------CC
T ss_pred cccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHH------HHHHHHHhCCCC---------CC
Confidence 23456899999999999999999999999999999999999999754321 112222211100 01
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCCCHH-HHHH
Q 005693 621 QNIEEEMVQMLQIGMACVAKVPDMRPNMD-EVVR 653 (682)
Q Consensus 621 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~-evl~ 653 (682)
... ...+.+++.+||+.||++||++. |+.+
T Consensus 239 ~~~---s~~~~~li~~lL~~dp~~R~~~~~~i~~ 269 (345)
T 1xjd_A 239 RWL---EKEAKDLLVKLFVREPEKRLGVRGDIRQ 269 (345)
T ss_dssp TTS---CHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred ccc---CHHHHHHHHHHhcCCHhHcCCChHHHHc
Confidence 112 23456777899999999999997 6654
No 80
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=1.2e-38 Score=328.25 Aligned_cols=250 Identities=26% Similarity=0.431 Sum_probs=203.8
Q ss_pred hccccccCeEEEEEEEEcCCceEEEEEeeccccChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccCCchh
Q 005693 390 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLS 469 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~L~ 469 (682)
.+.||+|+||.||+|...++..||+|+++......+.+.+|++++.++ +||||+++++++. ++..++||||+++|+|.
T Consensus 18 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~ 95 (279)
T 1qpc_A 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL-QHQRLVRLYAVVT-QEPIYIITEYMENGSLV 95 (279)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHC-CCTTBCCEEEEEC-SSSCEEEEECCTTCBHH
T ss_pred eeeecCCCCeEEEEEEEcCCcEEEEEEecCCcccHHHHHHHHHHHHhC-CCcCcceEEEEEc-CCCcEEEEecCCCCCHH
Confidence 478999999999999998888999999987666778899999999999 9999999999986 45689999999999999
Q ss_pred HhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCCC-----C
Q 005693 470 TLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA-----T 544 (682)
Q Consensus 470 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~-----~ 544 (682)
+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||++....... .
T Consensus 96 ~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 169 (279)
T 1qpc_A 96 DFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG 169 (279)
T ss_dssp HHTTSHH---HHTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTT
T ss_pred HHHhcCC---CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHhhEEEcCCCCEEECCCcccccccCcccccccC
Confidence 9996432 124899999999999999999999998 9999999999999999999999999997654322 2
Q ss_pred CCCCCcccCccccccCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhccccCh
Q 005693 545 PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNI 623 (682)
Q Consensus 545 ~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-g~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~ 623 (682)
..++..|+|||++.+..++.++||||||+++|||++ |+.||.+.... ....... ...... ..
T Consensus 170 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~------~~~~~~~-~~~~~~-------~~--- 232 (279)
T 1qpc_A 170 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP------EVIQNLE-RGYRMV-------RP--- 232 (279)
T ss_dssp CCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH------HHHHHHH-TTCCCC-------CC---
T ss_pred CCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHH------HHHHHHh-cccCCC-------Cc---
Confidence 335678999999998889999999999999999999 99999754321 1111111 111000 01
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCCC
Q 005693 624 EEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSE 664 (682)
Q Consensus 624 ~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~~~~ 664 (682)
......+.+++.+|++.||++|||++++++.|+++......
T Consensus 233 ~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~ 273 (279)
T 1qpc_A 233 DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEG 273 (279)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC--
T ss_pred ccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhccC
Confidence 12234567788899999999999999999999999866543
No 81
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=6.6e-39 Score=338.23 Aligned_cols=240 Identities=19% Similarity=0.331 Sum_probs=190.3
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeecccc--ChhhHHHHHHHHHHhcCCCceeceEEEEEecCc-----------
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDE----------- 455 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~----------- 455 (682)
.+.||+|+||.||+|+.. +++.||||+++.... ..+.+.+|++++.++ +||||+++++++.+...
T Consensus 11 ~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~~~~~~~~~~ 89 (332)
T 3qd2_B 11 IQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKL-EHPGIVRYFNAWLETPPEKWQEEMDEIW 89 (332)
T ss_dssp EEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSC-CCTTBCCEEEEEEECCSCHHHHHHHC--
T ss_pred eeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhC-CCCCEeeEEEEEEEeccchhhhhhhhhh
Confidence 578999999999999986 688999999975432 346789999999999 89999999999866542
Q ss_pred ----------------------------------------------eEEEEeeccCCchhHhhccCCCCCCCCCCHHHHH
Q 005693 456 ----------------------------------------------KLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRV 489 (682)
Q Consensus 456 ----------------------------------------------~~lV~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~ 489 (682)
.++||||+++|+|.+++..... ....++..++
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~ 167 (332)
T 3qd2_B 90 LKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCS--LEDREHGVCL 167 (332)
T ss_dssp ------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCS--GGGSCHHHHH
T ss_pred hccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccC--ccchhhHHHH
Confidence 7899999999999999986442 3346777899
Q ss_pred HHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCC----------------CCCCCCCcccC
Q 005693 490 KILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP----------------ATPSRSAGYRA 553 (682)
Q Consensus 490 ~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~----------------~~~~~~~~y~a 553 (682)
.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++..... ....+|+.|+|
T Consensus 168 ~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a 244 (332)
T 3qd2_B 168 HIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMS 244 (332)
T ss_dssp HHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSC
T ss_pred HHHHHHHHHHHHHHhCC---eeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccC
Confidence 99999999999999998 999999999999999999999999999765433 22357889999
Q ss_pred ccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhccccChHHHHHHHHHH
Q 005693 554 PEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQI 633 (682)
Q Consensus 554 PE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l 633 (682)
||++.+..++.++|||||||++|||++|..|+... ...... ..... ...........+.++
T Consensus 245 PE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~--------~~~~~~-~~~~~----------~~~~~~~~~~~~~~l 305 (332)
T 3qd2_B 245 PEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMER--------VRIITD-VRNLK----------FPLLFTQKYPQEHMM 305 (332)
T ss_dssp HHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHH--------HHHHHH-HHTTC----------CCHHHHHHCHHHHHH
T ss_pred hHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHH--------HHHHHH-hhccC----------CCcccccCChhHHHH
Confidence 99999999999999999999999999987765310 000010 00000 001112334556788
Q ss_pred HHHcccCCCCCCCCHHHHHHH
Q 005693 634 GMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 634 ~~~Cl~~dP~~RPt~~evl~~ 654 (682)
+.+||+.||++|||++|++++
T Consensus 306 i~~~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 306 VQDMLSPSPTERPEATDIIEN 326 (332)
T ss_dssp HHHHHCSSGGGSCCHHHHHHS
T ss_pred HHHHccCCCCcCCCHHHHhhc
Confidence 889999999999999999874
No 82
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=2.8e-39 Score=345.85 Aligned_cols=193 Identities=21% Similarity=0.337 Sum_probs=169.8
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeeccccChhhHHHHHHHHHHhc----CCCceeceEEEEEecCceEEEEeecc
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVG----QHPNVVPLRAYYYSKDEKLLVYDYFA 464 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~----~h~niv~l~~~~~~~~~~~lV~e~~~ 464 (682)
.+.||+|+||+||+|+.. +++.||+|+++......+.+..|++++..+. +||||+++++++...+..++||||+
T Consensus 40 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~- 118 (360)
T 3llt_A 40 IRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPL- 118 (360)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEEEEECCC-
T ss_pred EEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeEEEEcCC-
Confidence 478999999999999974 5788999999765444567788999999884 4999999999999999999999999
Q ss_pred CCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecC--------------------
Q 005693 465 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQ-------------------- 524 (682)
Q Consensus 465 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~-------------------- 524 (682)
+++|.+++.... ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.
T Consensus 119 ~~~L~~~~~~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~ 192 (360)
T 3llt_A 119 GPSLYEIITRNN---YNGFHIEDIKLYCIEILKALNYLRKMS---LTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQ 192 (360)
T ss_dssp CCBHHHHHHHTT---TCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEE
T ss_pred CCCHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCcccEEEccccccccccchhccccccccc
Confidence 899999997543 234899999999999999999999998 999999999999975
Q ss_pred -----CCCeEEeecCCCCCCCCC-CCCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCC
Q 005693 525 -----DLDGCISDFGLTPLMNVP-ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPT 589 (682)
Q Consensus 525 -----~~~~kl~DfGla~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~ 589 (682)
++.+||+|||+++..... ....+|+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 193 ~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~ 263 (360)
T 3llt_A 193 IYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHE 263 (360)
T ss_dssp EEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred ccccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCc
Confidence 789999999999765543 34568899999999999999999999999999999999999997644
No 83
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=8.7e-38 Score=324.39 Aligned_cols=255 Identities=17% Similarity=0.171 Sum_probs=198.8
Q ss_pred hccccccCeEEEEEEEE-cCCceEEEEEeeccccChhhHHHHHHHHHHhcCCCc-eeceEEEEEecCceEEEEeeccCCc
Q 005693 390 AEVLGKGSYGTAYKAVL-EESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPN-VVPLRAYYYSKDEKLLVYDYFASGS 467 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~n-iv~l~~~~~~~~~~~lV~e~~~~g~ 467 (682)
.+.||+|+||.||+|+. .+++.||+|++.... ..+++.+|++++..+ +|++ +..+..+....+..++||||+ +++
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~l~~l-~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~ 90 (296)
T 3uzp_A 14 GRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-KHPQLHIESKIYKMM-QGGVGIPTIRWCGAEGDYNVMVMELL-GPS 90 (296)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEEESCS-SCCHHHHHHHHHHHH-TTSTTCCCEEEEEEETTEEEEEEECC-CCB
T ss_pred EEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc-chhHHHHHHHHHHHh-hcCCCCCccccccCCCCceEEEEEec-CCC
Confidence 46899999999999997 567889999986543 345789999999999 5555 445444446677789999999 899
Q ss_pred hhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEe---cCCCCeEEeecCCCCCCCCC--
Q 005693 468 LSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLI---NQDLDGCISDFGLTPLMNVP-- 542 (682)
Q Consensus 468 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl---~~~~~~kl~DfGla~~~~~~-- 542 (682)
|.+++.... ..+++..+..++.|++.||+|||+++ |+||||||+||++ ++++.+||+|||++......
T Consensus 91 L~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~ 163 (296)
T 3uzp_A 91 LEDLFNFCS----RKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART 163 (296)
T ss_dssp HHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred HHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccccc
Confidence 999997432 24899999999999999999999998 9999999999999 48899999999998765432
Q ss_pred ---------CCCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccc
Q 005693 543 ---------ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 613 (682)
Q Consensus 543 ---------~~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 613 (682)
....+++.|+|||++.+..++.++|||||||++|||++|+.||......+.................
T Consensus 164 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~---- 239 (296)
T 3uzp_A 164 HQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI---- 239 (296)
T ss_dssp CCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH----
T ss_pred ccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCch----
Confidence 2345788999999999999999999999999999999999999876544333322221111100000
Q ss_pred hhhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCCC
Q 005693 614 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSE 664 (682)
Q Consensus 614 d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~~~~ 664 (682)
. .. .. .....+.+++.+||+.||++|||++|+++.|+++......
T Consensus 240 ~-~~--~~---~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~ 284 (296)
T 3uzp_A 240 E-VL--CK---GYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGF 284 (296)
T ss_dssp H-HH--TT---TSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred H-HH--Hh---hCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcCC
Confidence 0 00 01 1224567788899999999999999999999999876644
No 84
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=9.2e-39 Score=346.70 Aligned_cols=241 Identities=22% Similarity=0.311 Sum_probs=195.0
Q ss_pred hccccccCeEEEEEEEEcC-CceEEEEEeeccc----cChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeecc
Q 005693 390 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 464 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~ 464 (682)
.+.||+|+||+||+|+... ++.||+|+++... ...+.+.+|+.++..+ +||||+++++++.+++..++||||++
T Consensus 74 ~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~~~lV~E~~~ 152 (410)
T 3v8s_A 74 VKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA-NSPWVVQLFYAFQDDRYLYMVMEYMP 152 (410)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEECCEEEEEEeCCC
Confidence 4689999999999999864 6789999997532 2345688899999988 99999999999999999999999999
Q ss_pred CCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCC--
Q 005693 465 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP-- 542 (682)
Q Consensus 465 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~-- 542 (682)
+|+|.++++.. .+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 153 gg~L~~~l~~~------~~~e~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~ 223 (410)
T 3v8s_A 153 GGDLVNLMSNY------DVPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGM 223 (410)
T ss_dssp TEEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCTTSE
T ss_pred CCcHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeeECCCCCEEEeccceeEeeccCCc
Confidence 99999999743 3899999999999999999999998 999999999999999999999999999766543
Q ss_pred ---CCCCCCCcccCccccccCC----CCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchh
Q 005693 543 ---ATPSRSAGYRAPEVIETRK----HSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDV 615 (682)
Q Consensus 543 ---~~~~~~~~y~aPE~~~~~~----~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 615 (682)
.+..||+.|+|||++.+.. ++.++|||||||++|||++|+.||.+... ......+.......
T Consensus 224 ~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~------~~~~~~i~~~~~~~----- 292 (410)
T 3v8s_A 224 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL------VGTYSKIMNHKNSL----- 292 (410)
T ss_dssp EECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHHHHHTHHHHC-----
T ss_pred ccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCCh------hhHHHHHHhccccc-----
Confidence 2557899999999997665 78999999999999999999999975432 12222222211000
Q ss_pred hhccccChHHHHHHHHHHHHHcccCCCCC--CCCHHHHHHH
Q 005693 616 ELMRFQNIEEEMVQMLQIGMACVAKVPDM--RPNMDEVVRM 654 (682)
Q Consensus 616 ~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~--RPt~~evl~~ 654 (682)
........+ ..+.+++.+|++.+|++ ||+++|++++
T Consensus 293 ~~p~~~~~s---~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 293 TFPDDNDIS---KEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp CCCTTCCCC---HHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred cCCCccccc---HHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 000111222 34556677999999998 9999999985
No 85
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=7.6e-39 Score=360.17 Aligned_cols=248 Identities=25% Similarity=0.427 Sum_probs=205.0
Q ss_pred hccccccCeEEEEEEEEcCCceEEEEEeeccccChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccCCchh
Q 005693 390 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLS 469 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~L~ 469 (682)
.+.||+|+||.||+|.++++..||||+++......++|.+|+++++++ +|+||+++++++.+ +..++||||+++|+|.
T Consensus 272 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~-~~~~lv~e~~~~gsL~ 349 (535)
T 2h8h_A 272 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAVVSE-EPIYIVTEYMSKGSLL 349 (535)
T ss_dssp EEEEEECSSEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHC-CCTTBCCEEEEECS-SSCEEEECCCTTEEHH
T ss_pred heecccCCCeEEEEEEECCCceEEEEEeCCCCCCHHHHHHHHHHHHhC-CCCCEeeEEEEEee-ccceEeeehhcCCcHH
Confidence 578999999999999999888999999987666678899999999999 89999999999865 6789999999999999
Q ss_pred HhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCC-----CC
Q 005693 470 TLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP-----AT 544 (682)
Q Consensus 470 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~-----~~ 544 (682)
++++... ...+++.+++.++.||+.||+|||+++ |+||||||+|||+++++.+||+|||+++..... ..
T Consensus 350 ~~l~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~ 423 (535)
T 2h8h_A 350 DFLKGET---GKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 423 (535)
T ss_dssp HHHSHHH---HTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTTCS
T ss_pred HHHhhcC---CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHhhEEEcCCCcEEEcccccceecCCCceecccC
Confidence 9997432 124899999999999999999999998 999999999999999999999999999876432 22
Q ss_pred CCCCCcccCccccccCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhccccCh
Q 005693 545 PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNI 623 (682)
Q Consensus 545 ~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-g~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~ 623 (682)
..++..|+|||++....++.++|||||||++|||++ |+.||.+.... .....+ ...... ...
T Consensus 424 ~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~------~~~~~i-~~~~~~----------~~~ 486 (535)
T 2h8h_A 424 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR------EVLDQV-ERGYRM----------PCP 486 (535)
T ss_dssp TTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHH------HHHHHH-HTTCCC----------CCC
T ss_pred CcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH------HHHHHH-HcCCCC----------CCC
Confidence 345678999999999999999999999999999999 99999754321 111111 111110 011
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcC
Q 005693 624 EEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 662 (682)
Q Consensus 624 ~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~~ 662 (682)
..+...+.+++.+||+.||++|||++++++.|+++....
T Consensus 487 ~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~ 525 (535)
T 2h8h_A 487 PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 525 (535)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCC
T ss_pred CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhcc
Confidence 123345677888999999999999999999999887544
No 86
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=1.5e-38 Score=328.83 Aligned_cols=247 Identities=22% Similarity=0.434 Sum_probs=194.8
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeeccccC--------hhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEE
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG--------KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVY 460 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~--------~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~ 460 (682)
.+.||+|+||.||+|... +++.||+|++...... .+.+.+|++++.++ +||||+++++++.+. .++||
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~--~~lv~ 100 (287)
T 4f0f_A 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL-NHPNIVKLYGLMHNP--PRMVM 100 (287)
T ss_dssp EEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTC-CCTTBCCEEEEETTT--TEEEE
T ss_pred hhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhC-CCCCchhhheeecCC--CeEEE
Confidence 467999999999999975 5788999998654321 15788999999999 899999999998544 37999
Q ss_pred eeccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCC-----eEEeecCC
Q 005693 461 DYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLD-----GCISDFGL 535 (682)
Q Consensus 461 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~-----~kl~DfGl 535 (682)
||+++|+|.+++.... ..+++..+..++.|++.||+|||+.+ ++|+||||||+||+++.++. +||+|||+
T Consensus 101 e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~l~~~l~~lH~~~-~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~ 175 (287)
T 4f0f_A 101 EFVPCGDLYHRLLDKA----HPIKWSVKLRLMLDIALGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGL 175 (287)
T ss_dssp ECCTTCBHHHHHHCTT----SCCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCSCCSGGGEEESCCCTTCSCCEEECCCTT
T ss_pred EecCCCCHHHHHhccc----CCccHHHHHHHHHHHHHHHHHHHhCC-CCeecCCCCcceEEEeccCCCCceeEEeCCCCc
Confidence 9999999999886432 35899999999999999999999985 45999999999999988776 99999999
Q ss_pred CCCCCCCC-CCCCCCcccCccccc--cCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcccccc
Q 005693 536 TPLMNVPA-TPSRSAGYRAPEVIE--TRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEV 612 (682)
Q Consensus 536 a~~~~~~~-~~~~~~~y~aPE~~~--~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~ 612 (682)
++...... ...+++.|+|||++. ...++.++||||||+++|||++|+.||......+ ................
T Consensus 176 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~----~~~~~~~~~~~~~~~~ 251 (287)
T 4f0f_A 176 SQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK----IKFINMIREEGLRPTI 251 (287)
T ss_dssp CBCCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCH----HHHHHHHHHSCCCCCC
T ss_pred cccccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccH----HHHHHHHhccCCCCCC
Confidence 97654432 356889999999984 4557899999999999999999999997544221 1111221111111111
Q ss_pred chhhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHh
Q 005693 613 FDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEV 658 (682)
Q Consensus 613 ~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i 658 (682)
.......+.+++.+||+.||++|||++|+++.|+++
T Consensus 252 ----------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 252 ----------PEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp ----------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred ----------CcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 112234567788899999999999999999999864
No 87
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=5.3e-39 Score=332.53 Aligned_cols=248 Identities=23% Similarity=0.337 Sum_probs=195.8
Q ss_pred hccccccCeEEEEEEEEcC-C-------ceEEEEEeeccc-cChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEE
Q 005693 390 AEVLGKGSYGTAYKAVLEE-S-------TTVVVKRLKEVV-VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVY 460 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~-~-------~~vavK~l~~~~-~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~ 460 (682)
.+.||+|+||.||+|.... + ..||+|++.... ...+.+.+|++++.++ +||||+++++++.+++..++||
T Consensus 13 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~ 91 (289)
T 4fvq_A 13 NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKL-SHKHLVLNYGVCVCGDENILVQ 91 (289)
T ss_dssp EEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTS-CCTTBCCEEEEECCTTCCEEEE
T ss_pred eeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhC-CCCCEeEEEEEEEeCCCCEEEE
Confidence 4689999999999998654 2 469999986553 3356789999999999 8999999999999999999999
Q ss_pred eeccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCC--------eEEee
Q 005693 461 DYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLD--------GCISD 532 (682)
Q Consensus 461 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~--------~kl~D 532 (682)
||+++|+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++. +||+|
T Consensus 92 e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~D 164 (289)
T 4fvq_A 92 EFVKFGSLDTYLKKNK----NCINILWKLEVAKQLAAAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSD 164 (289)
T ss_dssp ECCTTCBHHHHHHHTG----GGCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEEECCBGGGTBCCEEEECC
T ss_pred ECCCCCCHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHhhCC---eECCCcCcceEEEecCCcccccccceeeecc
Confidence 9999999999997532 23899999999999999999999998 999999999999998887 99999
Q ss_pred cCCCCCCCCCCCCCCCCcccCcccccc-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccc
Q 005693 533 FGLTPLMNVPATPSRSAGYRAPEVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAE 611 (682)
Q Consensus 533 fGla~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~ 611 (682)
||++..........+++.|+|||++.+ ..++.++||||||+++|||++|..|+.... +...............
T Consensus 165 fg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~-----~~~~~~~~~~~~~~~~- 238 (289)
T 4fvq_A 165 PGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSAL-----DSQRKLQFYEDRHQLP- 238 (289)
T ss_dssp CCSCTTTSCHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTS-----CHHHHHHHHHTTCCCC-
T ss_pred CcccccccCccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCcccc-----chHHHHHHhhccCCCC-
Confidence 999977655444457888999999987 678999999999999999999655443221 1111111111100000
Q ss_pred cchhhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCC
Q 005693 612 VFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 663 (682)
Q Consensus 612 ~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~~~ 663 (682)
.. ....+.+++.+||+.||++|||++|++++|+++.....
T Consensus 239 ---------~~---~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~~ 278 (289)
T 4fvq_A 239 ---------AP---KAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDL 278 (289)
T ss_dssp ---------CC---SSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC----
T ss_pred ---------CC---CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCC
Confidence 00 12245678889999999999999999999999886543
No 88
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=1.1e-38 Score=337.56 Aligned_cols=265 Identities=23% Similarity=0.344 Sum_probs=193.4
Q ss_pred hccccccCeEEEEEEEEcCCceEEEEEeeccccChhhHHHHHHHHHH-hcCCCceeceEEEEEec-----CceEEEEeec
Q 005693 390 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGR-VGQHPNVVPLRAYYYSK-----DEKLLVYDYF 463 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~-l~~h~niv~l~~~~~~~-----~~~~lV~e~~ 463 (682)
.+.||+|+||.||+|+. +++.||+|++.... ...+..|.++... ..+|+||+++++.+... ...++||||+
T Consensus 18 ~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~--~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~ 94 (336)
T 3g2f_A 18 LELIGRGRYGAVYKGSL-DERPVAVKVFSFAN--RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYY 94 (336)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEECCC
T ss_pred eeecccCCCeEEEEEEE-CCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEEEecC
Confidence 47899999999999987 47899999997543 3444455544332 23899999999876532 2568999999
Q ss_pred cCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc---------CCCCcEecCCCCCCeEecCCCCeEEeecC
Q 005693 464 ASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSM---------GGPKFTHGNIKASNVLINQDLDGCISDFG 534 (682)
Q Consensus 464 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~---------~~~~ivHrDLk~~NILl~~~~~~kl~DfG 534 (682)
++|+|.+++.... .++..+..++.|++.||+|||+. + |+||||||+|||++.++.+||+|||
T Consensus 95 ~~g~L~~~l~~~~------~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~---ivH~Dikp~Nill~~~~~~kL~DFG 165 (336)
T 3g2f_A 95 PNGSLXKYLSLHT------SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPA---ISHRDLNSRNVLVKNDGTCVISDFG 165 (336)
T ss_dssp TTCBHHHHHHHCC------BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCC---EECSSCSGGGEEECTTSCEEECCCT
T ss_pred CCCcHHHHHhhcc------cchhHHHHHHHHHHHHHHHHHhhhccccccccc---eeecccccceEEEcCCCcEEEeecc
Confidence 9999999997432 68899999999999999999998 6 9999999999999999999999999
Q ss_pred CCCCCCCC------------CCCCCCCcccCcccccc-------CCCCCcchHHHHHHHHHHHHhCCCCCCCCCC-CCCC
Q 005693 535 LTPLMNVP------------ATPSRSAGYRAPEVIET-------RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTR-DDMV 594 (682)
Q Consensus 535 la~~~~~~------------~~~~~~~~y~aPE~~~~-------~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~-~~~~ 594 (682)
+++..... ....+|+.|+|||++.+ ..++.++|||||||++|||++|..||..... .+..
T Consensus 166 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~ 245 (336)
T 3g2f_A 166 LSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQ 245 (336)
T ss_dssp TCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCC
T ss_pred ceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHH
Confidence 99765321 12357889999999976 4567789999999999999999777643322 2211
Q ss_pred Ch----------hHHHHHHhhhccccccchhhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCCC
Q 005693 595 DL----------PRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSE 664 (682)
Q Consensus 595 ~l----------~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~~~~ 664 (682)
.. ................+.. ...........+.+++.+||+.||++|||++|+++.|+++......
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~~ 322 (336)
T 3g2f_A 246 MAFQTEVGNHPTFEDMQVLVSREKQRPKFPE---AWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWER 322 (336)
T ss_dssp CTTHHHHCSSCCHHHHHHHHTTSCCCCCCCT---TCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCCC
T ss_pred HhhhcccCCCchHHHHHhhhcccccCCCCCc---ccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHHh
Confidence 11 0111111111111111111 1112234556788899999999999999999999999999988777
Q ss_pred CCCCC
Q 005693 665 NRPSS 669 (682)
Q Consensus 665 ~~~~~ 669 (682)
+...+
T Consensus 323 ~~~~~ 327 (336)
T 3g2f_A 323 NKSVS 327 (336)
T ss_dssp -----
T ss_pred cccCC
Confidence 65443
No 89
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=2.3e-38 Score=335.21 Aligned_cols=256 Identities=25% Similarity=0.401 Sum_probs=203.4
Q ss_pred hccccccCeEEEEEEEEc--------CCceEEEEEeecccc--ChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEE
Q 005693 390 AEVLGKGSYGTAYKAVLE--------ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLV 459 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~--------~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV 459 (682)
.+.||+|+||.||+|... ++..||+|+++.... ..+.+.+|++++.++.+||||+++++++..++..++|
T Consensus 40 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 119 (334)
T 2pvf_A 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVI 119 (334)
T ss_dssp EEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCCEEE
T ss_pred eeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCCceEEE
Confidence 578999999999999873 456799999975432 2356889999999998899999999999999999999
Q ss_pred EeeccCCchhHhhccCCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCe
Q 005693 460 YDYFASGSLSTLLHGNRGA-----------GRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDG 528 (682)
Q Consensus 460 ~e~~~~g~L~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~ 528 (682)
|||+++|+|.+++...... ....+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+
T Consensus 120 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~ 196 (334)
T 2pvf_A 120 VEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVM 196 (334)
T ss_dssp EECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCE
T ss_pred EECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCccceEEEcCCCCE
Confidence 9999999999999864421 1234899999999999999999999998 9999999999999999999
Q ss_pred EEeecCCCCCCCCCC------CCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHH
Q 005693 529 CISDFGLTPLMNVPA------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQ 601 (682)
Q Consensus 529 kl~DfGla~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-g~~Pf~~~~~~~~~~l~~~~~ 601 (682)
||+|||+++...... ...+++.|+|||++.+..++.++||||||+++|||++ |+.||.+.... ....
T Consensus 197 kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~------~~~~ 270 (334)
T 2pvf_A 197 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE------ELFK 270 (334)
T ss_dssp EECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHH------HHHH
T ss_pred EEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHH------HHHH
Confidence 999999997654321 2335678999999998889999999999999999999 99999754321 1111
Q ss_pred HHhhhccccccchhhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCCCC
Q 005693 602 SVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSEN 665 (682)
Q Consensus 602 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~~~~~ 665 (682)
.. ....... ........+.+++.+||+.+|++|||++|+++.|+++.......
T Consensus 271 ~~-~~~~~~~----------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~~~ 323 (334)
T 2pvf_A 271 LL-KEGHRMD----------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTNE 323 (334)
T ss_dssp HH-HHTCCCC----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC--
T ss_pred HH-hcCCCCC----------CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccccC
Confidence 11 1111100 01122345677888999999999999999999999998766543
No 90
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=4e-39 Score=337.47 Aligned_cols=251 Identities=26% Similarity=0.395 Sum_probs=201.8
Q ss_pred hccccccCeEEEEEEEEc------CCceEEEEEeecccc--ChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEe
Q 005693 390 AEVLGKGSYGTAYKAVLE------ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYD 461 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e 461 (682)
.+.||+|+||.||+|... ++..||+|+++.... ..+.+.+|++++.++ +||||+++++++.+++..++|||
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e 106 (314)
T 2ivs_A 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQV-NHPHVIKLYGACSQDGPLLLIVE 106 (314)
T ss_dssp EEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhC-CCCceeeEEEEEecCCceEEEEe
Confidence 578999999999999862 347899999975432 235688899999999 89999999999999999999999
Q ss_pred eccCCchhHhhccCCCC-------------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEe
Q 005693 462 YFASGSLSTLLHGNRGA-------------------GRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLI 522 (682)
Q Consensus 462 ~~~~g~L~~~l~~~~~~-------------------~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl 522 (682)
|+++|+|.+++...... ....+++.++..++.|++.||+|||+++ |+||||||+||++
T Consensus 107 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dikp~NIli 183 (314)
T 2ivs_A 107 YAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK---LVHRDLAARNILV 183 (314)
T ss_dssp CCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEE
T ss_pred ecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCC---CcccccchheEEE
Confidence 99999999999764321 1234889999999999999999999998 9999999999999
Q ss_pred cCCCCeEEeecCCCCCCCCCC------CCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCCC
Q 005693 523 NQDLDGCISDFGLTPLMNVPA------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVD 595 (682)
Q Consensus 523 ~~~~~~kl~DfGla~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-g~~Pf~~~~~~~~~~ 595 (682)
++++.+||+|||+++...... ...+++.|+|||++.+..++.++||||||+++|||++ |+.||.+....+.
T Consensus 184 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~-- 261 (314)
T 2ivs_A 184 AEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERL-- 261 (314)
T ss_dssp ETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH--
T ss_pred cCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH--
Confidence 999999999999997654322 2335678999999999889999999999999999999 9999976543221
Q ss_pred hhHHHHHHhhhccccccchhhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 005693 596 LPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQS 661 (682)
Q Consensus 596 l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~ 661 (682)
. . ......... ........+.+++.+||+.||++||+++|++++|+++.+.
T Consensus 262 -~---~-~~~~~~~~~----------~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 312 (314)
T 2ivs_A 262 -F---N-LLKTGHRME----------RPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK 312 (314)
T ss_dssp -H---H-HHHTTCCCC----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred -H---H-HhhcCCcCC----------CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence 1 1 111111000 0112234567788899999999999999999999998764
No 91
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=6.6e-38 Score=325.14 Aligned_cols=255 Identities=16% Similarity=0.166 Sum_probs=197.5
Q ss_pred hccccccCeEEEEEEEE-cCCceEEEEEeeccccChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccCCch
Q 005693 390 AEVLGKGSYGTAYKAVL-EESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL 468 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~L 468 (682)
.+.||+|+||.||+|.. .+++.||+|++.... ..+.+.+|++++..+.+|+++..+..++...+..++||||+ +|+|
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L 91 (296)
T 4hgt_A 14 GRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSL 91 (296)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEEEEC----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CCBH
T ss_pred eeeecCCCCeEEEEEEEcCCCceEEEEeecccc-cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEcc-CCCH
Confidence 57899999999999997 457889999875543 23568899999999944444545555556777889999999 9999
Q ss_pred hHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEe---cCCCCeEEeecCCCCCCCCC---
Q 005693 469 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLI---NQDLDGCISDFGLTPLMNVP--- 542 (682)
Q Consensus 469 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl---~~~~~~kl~DfGla~~~~~~--- 542 (682)
.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||++ ++++.+||+|||+++.....
T Consensus 92 ~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~ 164 (296)
T 4hgt_A 92 EDLFNFCS----RKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH 164 (296)
T ss_dssp HHHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTC
T ss_pred HHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeeeeccCCCCeEEEecCccceeccCcccC
Confidence 99997432 24899999999999999999999998 9999999999999 78899999999999765432
Q ss_pred --------CCCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccch
Q 005693 543 --------ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFD 614 (682)
Q Consensus 543 --------~~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 614 (682)
....+++.|+|||++.+..++.++|||||||++|||++|+.||.+...................... .
T Consensus 165 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~----~ 240 (296)
T 4hgt_A 165 QHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI----E 240 (296)
T ss_dssp CBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH----H
T ss_pred ccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchh----h
Confidence 2345788999999999999999999999999999999999999876554443332211111100000 0
Q ss_pred hhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCC
Q 005693 615 VELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 663 (682)
Q Consensus 615 ~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~~~ 663 (682)
. .... ....+.+++.+||+.||++|||++|+++.|+++.+...
T Consensus 241 -~--~~~~---~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~ 283 (296)
T 4hgt_A 241 -V--LCKG---YPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG 283 (296)
T ss_dssp -H--HTTT---SCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred -h--hhcc---CCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhC
Confidence 0 0011 12456778889999999999999999999999987654
No 92
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=2e-38 Score=324.58 Aligned_cols=248 Identities=24% Similarity=0.376 Sum_probs=198.9
Q ss_pred hccccccCeEEEEEEEEcCCceEEEEEeeccccC---hhhHHHHHHHHHHhcCCCceeceEEEEEec--CceEEEEeecc
Q 005693 390 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSK--DEKLLVYDYFA 464 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~--~~~~lV~e~~~ 464 (682)
.+.||+|+||.||+|+.+ ++.||+|+++..... .+.+.+|+.++.++ +||||+++++++.+. ...++||||++
T Consensus 15 ~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~lv~e~~~ 92 (271)
T 3kmu_A 15 LTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIF-SHPNVLPVLGACQSPPAPHPTLITHWMP 92 (271)
T ss_dssp EEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCC-SCTTEECEEEEECTTTSSSCEEEEECCT
T ss_pred HHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhc-CCCchhheEEEEccCCCCCeEeeecccC
Confidence 478999999999999986 788999999765433 34688899999988 899999999999877 67899999999
Q ss_pred CCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCCCC
Q 005693 465 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPAT 544 (682)
Q Consensus 465 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~~ 544 (682)
+|+|.+++.... ...+++..+..++.|++.||+|||+.+ ++|+||||||+||++++++.++|+|||++..... ..
T Consensus 93 ~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~-~~ 167 (271)
T 3kmu_A 93 YGSLYNVLHEGT---NFVVDQSQAVKFALDMARGMAFLHTLE-PLIPRHALNSRSVMIDEDMTARISMADVKFSFQS-PG 167 (271)
T ss_dssp TCBHHHHHHSCS---SCCCCHHHHHHHHHHHHHHHHHHTTSS-SCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC-TT
T ss_pred CCcHHHHHhhcc---cCCCCHHHHHHHHHHHHHHHHHHhcCC-CceecCCCccceEEEcCCcceeEEeccceeeecc-cC
Confidence 999999998543 235899999999999999999999875 5599999999999999999999999988765433 33
Q ss_pred CCCCCcccCccccccCCCCC---cchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhcccc
Q 005693 545 PSRSAGYRAPEVIETRKHSH---KSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQ 621 (682)
Q Consensus 545 ~~~~~~y~aPE~~~~~~~~~---~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 621 (682)
..+|+.|+|||++.+..++. ++||||||+++|||++|+.||..... ................ .
T Consensus 168 ~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~------~~~~~~~~~~~~~~~~-------~- 233 (271)
T 3kmu_A 168 RMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSN------MEIGMKVALEGLRPTI-------P- 233 (271)
T ss_dssp CBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCH------HHHHHHHHHSCCCCCC-------C-
T ss_pred ccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccCh------HHHHHHHHhcCCCCCC-------C-
Confidence 45789999999998765544 79999999999999999999975432 1111222211111110 1
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhh
Q 005693 622 NIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQ 660 (682)
Q Consensus 622 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~ 660 (682)
......+.+++.+||+.||++|||++|+++.|+++.+
T Consensus 234 --~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 234 --PGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp --TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred --CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 1123456778889999999999999999999999864
No 93
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=5.7e-39 Score=338.05 Aligned_cols=255 Identities=23% Similarity=0.397 Sum_probs=190.3
Q ss_pred hccccccCeEEEEEEEEcCCc----eEEEEEeecccc---ChhhHHHHHHHHHHhcCCCceeceEEEEEecCce------
Q 005693 390 AEVLGKGSYGTAYKAVLEEST----TVVVKRLKEVVV---GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEK------ 456 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~~~----~vavK~l~~~~~---~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~------ 456 (682)
.+.||+|+||.||+|....+. .||+|+++.... ..+.+.+|+++++++ +||||+++++++...+..
T Consensus 28 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~ 106 (323)
T 3qup_A 28 GRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEF-DHPHVAKLVGVSLRSRAKGRLPIP 106 (323)
T ss_dssp EEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTC-CCTTBCCCCEEEECC-------CE
T ss_pred eceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHC-CCCceehhhceeeccccccCCCcc
Confidence 578999999999999865433 799999976432 245788999999999 999999999999877655
Q ss_pred EEEEeeccCCchhHhhccCCC-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCC
Q 005693 457 LLVYDYFASGSLSTLLHGNRG-AGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGL 535 (682)
Q Consensus 457 ~lV~e~~~~g~L~~~l~~~~~-~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGl 535 (682)
++||||+++|+|.+++..... .....+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+
T Consensus 107 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---ivH~Dikp~NIli~~~~~~kl~Dfg~ 183 (323)
T 3qup_A 107 MVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN---FIHRDLAARNCMLAEDMTVCVADFGL 183 (323)
T ss_dssp EEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTSCEEECCCCC
T ss_pred EEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCC---cccCCCCcceEEEcCCCCEEEeeccc
Confidence 999999999999999964321 12235899999999999999999999998 99999999999999999999999999
Q ss_pred CCCCCCCC------CCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhcc
Q 005693 536 TPLMNVPA------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEW 608 (682)
Q Consensus 536 a~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-g~~Pf~~~~~~~~~~l~~~~~~~~~~~~ 608 (682)
++...... ...+++.|+|||.+.+..++.++|||||||++|||++ |..||.+....+. .........
T Consensus 184 a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~------~~~~~~~~~ 257 (323)
T 3qup_A 184 SRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEI------YNYLIGGNR 257 (323)
T ss_dssp -----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH------HHHHHTTCC
T ss_pred cccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHH------HHHHhcCCC
Confidence 97654322 2235668999999999999999999999999999999 9999986543221 111111111
Q ss_pred ccccchhhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCCCC
Q 005693 609 TAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSEN 665 (682)
Q Consensus 609 ~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~~~~~ 665 (682)
. .........+.+++.+||+.||++|||+.|+++.|+++.+.....
T Consensus 258 ~-----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~ 303 (323)
T 3qup_A 258 L-----------KQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVL 303 (323)
T ss_dssp C-----------CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC----
T ss_pred C-----------CCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhc
Confidence 0 011122345678888999999999999999999999999776543
No 94
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=3.8e-39 Score=333.84 Aligned_cols=253 Identities=24% Similarity=0.366 Sum_probs=192.2
Q ss_pred hccccccCeEEEEEEEEcCCceEEEEEeecccc---ChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccCC
Q 005693 390 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVV---GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 466 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~---~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g 466 (682)
.+.||+|+||+||+|+..+++.||+|++..... ..+.+.+|++++.++ +||||+++++++.+++..++||||+++
T Consensus 7 ~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~- 84 (288)
T 1ob3_A 7 LEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKEL-KHSNIVKLYDVIHTKKRLVLVFEHLDQ- 84 (288)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGC-CCTTBCCEEEEEECSSCEEEEEECCSE-
T ss_pred hhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhc-CCCCEeeeeeEEccCCeEEEEEEecCC-
Confidence 467999999999999998899999999965432 235688999999999 899999999999999999999999986
Q ss_pred chhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCC----
Q 005693 467 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP---- 542 (682)
Q Consensus 467 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~---- 542 (682)
+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 85 ~l~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 157 (288)
T 1ob3_A 85 DLKKLLDVCE----GGLESVTAKSFLLQLLNGIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY 157 (288)
T ss_dssp EHHHHHHTST----TCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred CHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEEeECccccccCcccccc
Confidence 9999987532 34899999999999999999999998 999999999999999999999999998654322
Q ss_pred CCCCCCCcccCccccccC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhh----cccc----ccc
Q 005693 543 ATPSRSAGYRAPEVIETR-KHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVRE----EWTA----EVF 613 (682)
Q Consensus 543 ~~~~~~~~y~aPE~~~~~-~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~----~~~~----~~~ 613 (682)
....+|+.|+|||++.+. .++.++||||+||++|||++|+.||.+....+. +.... ..... .|.. ..+
T Consensus 158 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~ 234 (288)
T 1ob3_A 158 THEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQ--LMRIF-RILGTPNSKNWPNVTELPKY 234 (288)
T ss_dssp ----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH--HHHHH-HHHCCCCTTTSTTGGGSTTC
T ss_pred ccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHH-HHHCCCChhhchhhhccccc
Confidence 233578899999999764 589999999999999999999999976432111 11111 11000 0000 001
Q ss_pred hhhhccc------cChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 614 DVELMRF------QNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 614 d~~l~~~------~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
++..... .........+.+++.+||+.||++|||++|++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 281 (288)
T 1ob3_A 235 DPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (288)
T ss_dssp CTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 1111000 0001123456678889999999999999999864
No 95
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=1.6e-38 Score=338.64 Aligned_cols=239 Identities=23% Similarity=0.303 Sum_probs=195.1
Q ss_pred hccccccCeEEEEEEEEcC-CceEEEEEeeccc----cChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeecc
Q 005693 390 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 464 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~ 464 (682)
.+.||+|+||.||+|+.+. ++.||+|+++... ...+.+..|..++..+.+||||+++++++.+.+..++||||++
T Consensus 25 ~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~ 104 (353)
T 2i0e_A 25 LMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVN 104 (353)
T ss_dssp EEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEEEeCCC
Confidence 4789999999999999875 6789999997642 2345677888888887789999999999999999999999999
Q ss_pred CCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCC---
Q 005693 465 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV--- 541 (682)
Q Consensus 465 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~--- 541 (682)
+|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 105 gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~ 176 (353)
T 2i0e_A 105 GGDLMYHIQQV-----GRFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV 176 (353)
T ss_dssp SCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC
T ss_pred CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEEcCCCcEEEEeCCcccccccCCc
Confidence 99999999743 23899999999999999999999998 99999999999999999999999999976432
Q ss_pred -CCCCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhccc
Q 005693 542 -PATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 620 (682)
Q Consensus 542 -~~~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 620 (682)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||.+... ......+...... ..
T Consensus 177 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~------~~~~~~i~~~~~~---------~p 241 (353)
T 2i0e_A 177 TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE------DELFQSIMEHNVA---------YP 241 (353)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHCCCC---------CC
T ss_pred ccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCH------HHHHHHHHhCCCC---------CC
Confidence 2345689999999999999999999999999999999999999975432 1222222222110 01
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHHH
Q 005693 621 QNIEEEMVQMLQIGMACVAKVPDMRPN-----MDEVVRM 654 (682)
Q Consensus 621 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt-----~~evl~~ 654 (682)
.. ....+.+++.+||+.||++||+ ++|++++
T Consensus 242 ~~---~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h 277 (353)
T 2i0e_A 242 KS---MSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 277 (353)
T ss_dssp TT---SCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred CC---CCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 11 2235667777999999999995 5777764
No 96
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=8.5e-39 Score=329.92 Aligned_cols=246 Identities=22% Similarity=0.373 Sum_probs=189.5
Q ss_pred hccccccCeEEEEEEEEcC----CceEEEEEeecccc--ChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeec
Q 005693 390 AEVLGKGSYGTAYKAVLEE----STTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYF 463 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~----~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~ 463 (682)
.+.||+|+||.||+|.... +..||+|+++.... ..+.+.+|+.++.++ +||||+++++++ .++..++||||+
T Consensus 20 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~-~~~~~~lv~e~~ 97 (281)
T 1mp8_A 20 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF-DHPHIVKLIGVI-TENPVWIIMELC 97 (281)
T ss_dssp EEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTC-CCTTBCCEEEEE-CSSSCEEEEECC
T ss_pred EeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhC-CCCccceEEEEE-ccCccEEEEecC
Confidence 5789999999999999753 34689998865432 245688999999999 899999999998 456789999999
Q ss_pred cCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCCC
Q 005693 464 ASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA 543 (682)
Q Consensus 464 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~ 543 (682)
++|+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 98 ~~~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 170 (281)
T 1mp8_A 98 TLGELRSFLQVRK----YSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 170 (281)
T ss_dssp TTEEHHHHHHHTT----TTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECC-----------
T ss_pred CCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecccccHHHEEECCCCCEEECccccccccCccc
Confidence 9999999997532 34899999999999999999999998 9999999999999999999999999998765432
Q ss_pred -----CCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhh
Q 005693 544 -----TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVEL 617 (682)
Q Consensus 544 -----~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-g~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 617 (682)
...+++.|+|||++.+..++.++||||||+++|||++ |..||.+....+. ...+......
T Consensus 171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~------~~~i~~~~~~-------- 236 (281)
T 1mp8_A 171 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV------IGRIENGERL-------- 236 (281)
T ss_dssp --------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH------HHHHHTTCCC--------
T ss_pred ccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHH------HHHHHcCCCC--------
Confidence 2234678999999998899999999999999999997 9999986543221 1111111100
Q ss_pred ccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 005693 618 MRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQS 661 (682)
Q Consensus 618 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~ 661 (682)
.........+.+++.+||+.||++|||++|+++.|+++.+.
T Consensus 237 ---~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 277 (281)
T 1mp8_A 237 ---PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 277 (281)
T ss_dssp ---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ---CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 00112234567788899999999999999999999998764
No 97
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.3e-40 Score=346.75 Aligned_cols=255 Identities=23% Similarity=0.374 Sum_probs=183.5
Q ss_pred hccccccCeEEEEEEEEcCCceEEEEEeeccccChhhHHHHHHHHHHh-cCCCceeceEEEEEecC----ceEEEEeecc
Q 005693 390 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRV-GQHPNVVPLRAYYYSKD----EKLLVYDYFA 464 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l-~~h~niv~l~~~~~~~~----~~~lV~e~~~ 464 (682)
.+.||+|+||.||+|+.. ++.||+|++... ....+.+|.+++... .+||||+++++++.... ..++||||++
T Consensus 8 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~ 84 (303)
T 3gxj_A 8 QESIGKGRFGEVWRGKWR-GEEVAVKIFSSR--EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHE 84 (303)
T ss_dssp CEEEEECSSSEEEEC-CT-TSCEEEEECC-T--THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEEEECCT
T ss_pred hhhccCCCCeEEEEEEEc-CcceEEEEeccc--chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEEEEeccC
Confidence 478999999999999875 889999998643 345677788887763 38999999999998876 7899999999
Q ss_pred CCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHH--------hcCCCCcEecCCCCCCeEecCCCCeEEeecCCC
Q 005693 465 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIH--------SMGGPKFTHGNIKASNVLINQDLDGCISDFGLT 536 (682)
Q Consensus 465 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH--------~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla 536 (682)
+|+|.++++.. .+++..+..++.|++.||+||| +.+ |+||||||+||+++.++.+||+|||++
T Consensus 85 ~g~L~~~l~~~------~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~Nil~~~~~~~kl~DFg~a 155 (303)
T 3gxj_A 85 HGSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA---IAHRDLKSKNILVKKNGTCCIADLGLA 155 (303)
T ss_dssp TCCHHHHHHHC------CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-BCCCCC-
T ss_pred CCCHHHHHhcc------CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCC---EeeCcCCHHHeEECCCCCEEEeecCcc
Confidence 99999999643 3788889999999999999999 776 999999999999999999999999999
Q ss_pred CCCCCCC--------CCCCCCcccCccccccC------CCCCcchHHHHHHHHHHHHhC----------CCCCCCCCCCC
Q 005693 537 PLMNVPA--------TPSRSAGYRAPEVIETR------KHSHKSDVYSFGVLLLEMLTG----------KAPLQSPTRDD 592 (682)
Q Consensus 537 ~~~~~~~--------~~~~~~~y~aPE~~~~~------~~~~~sDvwS~Gvvl~elltg----------~~Pf~~~~~~~ 592 (682)
....... ...+|+.|+|||++.+. .++.++|||||||++|||+|| ..||......+
T Consensus 156 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~~~ 235 (303)
T 3gxj_A 156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 235 (303)
T ss_dssp CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-C
T ss_pred eeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCCCC
Confidence 7654332 22578999999999776 344689999999999999999 66665432211
Q ss_pred CCChhHHHHHHhhhccccccchhhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcC
Q 005693 593 MVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 662 (682)
Q Consensus 593 ~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~~ 662 (682)
. ............. . .+.........+....+.+++.+||+.||++|||++|+++.|+++.+..
T Consensus 236 ~-~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~~ 299 (303)
T 3gxj_A 236 P-SVEEMRKVVCEQK-L----RPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp C-CCC-CHHHHTTSC-C----CCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC-
T ss_pred c-cHHHHHHHHHHhh-c----CCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhhc
Confidence 1 0011111111111 1 1111111112356677889999999999999999999999999888654
No 98
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=2.1e-38 Score=340.87 Aligned_cols=240 Identities=20% Similarity=0.299 Sum_probs=194.3
Q ss_pred hccccccCeEEEEEEEEcC-CceEEEEEeeccc----cChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeecc
Q 005693 390 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 464 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~ 464 (682)
.+.||+|+||.||++.... ++.||+|++.... ...+.+.+|++++..+ +||||+++++++.+.+..++||||++
T Consensus 20 ~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~~~lv~e~~~ 98 (384)
T 4fr4_A 20 LRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGL-EHPFLVNLWYSFQDEEDMFMVVDLLL 98 (384)
T ss_dssp EEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEeCCEEEEEEecCC
Confidence 5789999999999999764 6789999987542 2345788999999999 99999999999999999999999999
Q ss_pred CCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCC--
Q 005693 465 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP-- 542 (682)
Q Consensus 465 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~-- 542 (682)
+|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 99 gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~ 170 (384)
T 4fr4_A 99 GGDLRYHLQQN-----VHFKEETVKLFICELVMALDYLQNQR---IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQ 170 (384)
T ss_dssp TEEHHHHHHTT-----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCTTCC
T ss_pred CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCcHHHeEECCCCCEEEeccceeeeccCCCc
Confidence 99999999743 34899999999999999999999998 999999999999999999999999999765433
Q ss_pred -CCCCCCCcccCcccccc---CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhc
Q 005693 543 -ATPSRSAGYRAPEVIET---RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELM 618 (682)
Q Consensus 543 -~~~~~~~~y~aPE~~~~---~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 618 (682)
....||+.|+|||++.. ..++.++|||||||++|||++|+.||....... ............. .
T Consensus 171 ~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~---~~~~~~~~~~~~~---------~ 238 (384)
T 4fr4_A 171 ITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTS---SKEIVHTFETTVV---------T 238 (384)
T ss_dssp BCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSC---HHHHHHHHHHCCC---------C
T ss_pred eeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCcc---HHHHHHHHhhccc---------C
Confidence 34568999999999974 458999999999999999999999997544322 1111111111110 0
Q ss_pred cccChHHHHHHHHHHHHHcccCCCCCCCC-HHHHHH
Q 005693 619 RFQNIEEEMVQMLQIGMACVAKVPDMRPN-MDEVVR 653 (682)
Q Consensus 619 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt-~~evl~ 653 (682)
.. ......+.+++.+||+.||++||+ ++++.+
T Consensus 239 ~p---~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 239 YP---SAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp CC---TTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred CC---CcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 01 112345677788999999999998 777765
No 99
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.5e-38 Score=334.92 Aligned_cols=249 Identities=25% Similarity=0.471 Sum_probs=195.7
Q ss_pred hccccccCeEEEEEEEEcCC-----ceEEEEEeecccc--ChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEee
Q 005693 390 AEVLGKGSYGTAYKAVLEES-----TTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDY 462 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~~-----~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~ 462 (682)
.+.||+|+||.||+|....+ ..||+|+++.... ...++.+|++++.++ +||||+++++++...+..++||||
T Consensus 49 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~ 127 (333)
T 1mqb_A 49 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF-SHHNIIRLEGVISKYKPMMIITEY 127 (333)
T ss_dssp EEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECSSSSEEEEEEC
T ss_pred ccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEecCCCcEEEEeC
Confidence 47899999999999986532 3599999875432 234688999999999 899999999999999999999999
Q ss_pred ccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCC
Q 005693 463 FASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP 542 (682)
Q Consensus 463 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~ 542 (682)
+++|+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 128 ~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~ 200 (333)
T 1mqb_A 128 MENGALDKFLREKD----GEFSVLQLVGMLRGIAAGMKYLANMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 200 (333)
T ss_dssp CTTEEHHHHHHHTT----TCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCCCC-------
T ss_pred CCCCcHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChheEEECCCCcEEECCCCcchhhccc
Confidence 99999999997532 34899999999999999999999998 999999999999999999999999999776432
Q ss_pred C-------CCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccch
Q 005693 543 A-------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFD 614 (682)
Q Consensus 543 ~-------~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-g~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 614 (682)
. ...+++.|+|||++.+..++.++||||||+++|||++ |+.||...... .....+. +....
T Consensus 201 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~------~~~~~~~-~~~~~---- 269 (333)
T 1mqb_A 201 PEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH------EVMKAIN-DGFRL---- 269 (333)
T ss_dssp ----------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH------HHHHHHH-TTCCC----
T ss_pred cccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHH------HHHHHHH-CCCcC----
Confidence 2 1124667999999998899999999999999999999 99999754321 1111111 11100
Q ss_pred hhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCC
Q 005693 615 VELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 663 (682)
Q Consensus 615 ~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~~~ 663 (682)
.........+.+++.+||+.+|++||+++|+++.|+++.+...
T Consensus 270 ------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~ 312 (333)
T 1mqb_A 270 ------PTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPD 312 (333)
T ss_dssp ------CCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGG
T ss_pred ------CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcch
Confidence 0011223456778889999999999999999999999886543
No 100
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=4.4e-39 Score=332.93 Aligned_cols=249 Identities=25% Similarity=0.396 Sum_probs=205.4
Q ss_pred hccccccCeEEEEEEEEcC-CceEEEEEeeccccChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccCCch
Q 005693 390 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL 468 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~L 468 (682)
.+.||+|+||.||+|.... +..||+|++.......+.+.+|++++.++ +||||+++++++.+++..++||||+++|+|
T Consensus 18 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 96 (288)
T 3kfa_A 18 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNL 96 (288)
T ss_dssp EEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSEEEEEECCTTEEH
T ss_pred EeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEccCCCEEEEEEcCCCCcH
Confidence 4689999999999999875 67899999987655567899999999999 899999999999999999999999999999
Q ss_pred hHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCCCC----
Q 005693 469 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPAT---- 544 (682)
Q Consensus 469 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~~---- 544 (682)
.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++........
T Consensus 97 ~~~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 170 (288)
T 3kfa_A 97 LDYLRECN---RQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 170 (288)
T ss_dssp HHHHHHCC---TTTSCHHHHHHHHHHHHHHHHHHHHHT---CCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEEET
T ss_pred HHHHHhcc---cCCccHhHHHHHHHHHHHHHHHHHHCC---ccCCCCCcceEEEcCCCCEEEccCccceeccCCcccccc
Confidence 99997543 345899999999999999999999998 99999999999999999999999999987654321
Q ss_pred -CCCCCcccCccccccCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhccccC
Q 005693 545 -PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQN 622 (682)
Q Consensus 545 -~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-g~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~ 622 (682)
..+++.|+|||++.+..++.++||||||+++|+|++ |..||......+ +. .. ....... ..
T Consensus 171 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~---~~---~~-~~~~~~~----------~~ 233 (288)
T 3kfa_A 171 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ---VY---EL-LEKDYRM----------ER 233 (288)
T ss_dssp TEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---HH---HH-HHTTCCC----------CC
T ss_pred CCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH---HH---HH-HhccCCC----------CC
Confidence 224667999999998999999999999999999999 999997654222 11 11 1111100 01
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcC
Q 005693 623 IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 662 (682)
Q Consensus 623 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~~ 662 (682)
.......+.+++.+|++.||++|||++|+++.|+++.+..
T Consensus 234 ~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~~ 273 (288)
T 3kfa_A 234 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273 (288)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHhc
Confidence 1122345677888999999999999999999999887653
No 101
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=2.7e-38 Score=335.45 Aligned_cols=256 Identities=23% Similarity=0.372 Sum_probs=201.7
Q ss_pred hccccccCeEEEEEEEEcCCceEEEEEeeccccChhhHHHHHHHHHHh-cCCCceeceEEEEEecC----ceEEEEeecc
Q 005693 390 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRV-GQHPNVVPLRAYYYSKD----EKLLVYDYFA 464 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l-~~h~niv~l~~~~~~~~----~~~lV~e~~~ 464 (682)
.+.||+|+||.||+|+.. ++.||+|++... ..+.+.+|.+++..+ .+||||+++++++.... ..++||||++
T Consensus 47 ~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~--~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~ 123 (342)
T 1b6c_B 47 QESIGKGRFGEVWRGKWR-GEEVAVKIFSSR--EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHE 123 (342)
T ss_dssp EEEEEEETTEEEEEEEET-TEEEEEEEECGG--GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEEECCCT
T ss_pred EeeecCCCCcEEEEEEEc-CccEEEEEeCch--hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEEEeecC
Confidence 578999999999999985 889999998653 245678888888873 38999999999998876 7899999999
Q ss_pred CCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHH--------hcCCCCcEecCCCCCCeEecCCCCeEEeecCCC
Q 005693 465 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIH--------SMGGPKFTHGNIKASNVLINQDLDGCISDFGLT 536 (682)
Q Consensus 465 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH--------~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla 536 (682)
+|+|.+++... .+++..++.++.|++.||+||| +.+ |+||||||+||+++.++.+||+|||++
T Consensus 124 ~g~L~~~l~~~------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~NIll~~~~~~kL~Dfg~~ 194 (342)
T 1b6c_B 124 HGSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA---IAHRDLKSKNILVKKNGTCCIADLGLA 194 (342)
T ss_dssp TCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE---EECSCCSGGGEEECTTSCEEECCCTTC
T ss_pred CCcHHHHHhcc------CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCC---eeeCCCCHHHEEECCCCCEEEEECCCc
Confidence 99999999743 3899999999999999999999 666 999999999999999999999999998
Q ss_pred CCCCCC--------CCCCCCCcccCccccccCC------CCCcchHHHHHHHHHHHHhC----------CCCCCCCCCCC
Q 005693 537 PLMNVP--------ATPSRSAGYRAPEVIETRK------HSHKSDVYSFGVLLLEMLTG----------KAPLQSPTRDD 592 (682)
Q Consensus 537 ~~~~~~--------~~~~~~~~y~aPE~~~~~~------~~~~sDvwS~Gvvl~elltg----------~~Pf~~~~~~~ 592 (682)
...... ....+++.|+|||++.+.. ++.++||||||+++|||+|| ..||......+
T Consensus 195 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~ 274 (342)
T 1b6c_B 195 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 274 (342)
T ss_dssp EEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred eeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCc
Confidence 655432 2345788999999997653 34689999999999999999 67776543222
Q ss_pred CCChhHHHHHHhhhccccccchhhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCC
Q 005693 593 MVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 663 (682)
Q Consensus 593 ~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~~~ 663 (682)
.....+............ +.......+....+.+++.+||+.||++|||++|++++|+++.+...
T Consensus 275 -~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~~ 339 (342)
T 1b6c_B 275 -PSVEEMRKVVCEQKLRPN-----IPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEG 339 (342)
T ss_dssp -CCHHHHHHHHTTSCCCCC-----CCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTTC
T ss_pred -ccHHHHHHHHHHHHhCCC-----CcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHhc
Confidence 122222222222211111 11111123566778889999999999999999999999999987653
No 102
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=3.3e-38 Score=331.04 Aligned_cols=249 Identities=22% Similarity=0.313 Sum_probs=191.9
Q ss_pred ccccccCeEEEEEEEEc-CCceEEEEEeecccc-ChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccCCch
Q 005693 391 EVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV-GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL 468 (682)
Q Consensus 391 ~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~L 468 (682)
+.||+|+||.||+|... +++.||+|++..... ..+.+.+|++++.++.+||||+++++++.+++..++||||+++|+|
T Consensus 19 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 98 (316)
T 2ac3_A 19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSI 98 (316)
T ss_dssp CCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTCBH
T ss_pred ceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCCCcH
Confidence 57999999999999954 578999999976533 3567899999999976899999999999999999999999999999
Q ss_pred hHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCC---eEEeecCCCCCCCCC---
Q 005693 469 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLD---GCISDFGLTPLMNVP--- 542 (682)
Q Consensus 469 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~---~kl~DfGla~~~~~~--- 542 (682)
.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++. +||+|||++......
T Consensus 99 ~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~ 170 (316)
T 2ac3_A 99 LSHIHKR-----RHFNELEASVVVQDVASALDFLHNKG---IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDC 170 (316)
T ss_dssp HHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESCSSSSCSEEECCTTCCC--------
T ss_pred HHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCcc
Confidence 9999753 24899999999999999999999998 999999999999998776 999999998765321
Q ss_pred --------CCCCCCCcccCcccccc-----CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCC-----hh---HHHH
Q 005693 543 --------ATPSRSAGYRAPEVIET-----RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVD-----LP---RWVQ 601 (682)
Q Consensus 543 --------~~~~~~~~y~aPE~~~~-----~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~-----l~---~~~~ 601 (682)
....+++.|+|||++.. ..++.++|||||||++|||++|+.||.+....+... .. ....
T Consensus 171 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 250 (316)
T 2ac3_A 171 SPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLF 250 (316)
T ss_dssp -----------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHH
T ss_pred ccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHH
Confidence 12347889999999875 558899999999999999999999998765432110 00 0001
Q ss_pred HHhhhccccccchhhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 602 SVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 602 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
..+..... ...+. ... .....+.+++.+||+.||++|||++|++++
T Consensus 251 ~~i~~~~~-~~~~~---~~~---~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 251 ESIQEGKY-EFPDK---DWA---HISCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp HHHHHCCC-CCCHH---HHT---TSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHhccCc-ccCch---hcc---cCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 11111100 00000 001 123456778889999999999999999884
No 103
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.1e-38 Score=332.18 Aligned_cols=237 Identities=22% Similarity=0.321 Sum_probs=187.1
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeeccccCh---hhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccC
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVGK---RDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 465 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~---~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~ 465 (682)
.+.||+|+||+||+|... +++.||||++....... ..+..|+..+.++.+|+||+++++++.+++..++||||+ +
T Consensus 62 ~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~e~~-~ 140 (311)
T 3p1a_A 62 LSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELC-G 140 (311)
T ss_dssp EEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC-C
T ss_pred eheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEEecc-C
Confidence 568999999999999986 68899999986544332 345556666667768999999999999999999999999 6
Q ss_pred CchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCC---
Q 005693 466 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP--- 542 (682)
Q Consensus 466 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~--- 542 (682)
|+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 141 ~~L~~~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~~~ 213 (311)
T 3p1a_A 141 PSLQQHCEAWG----ASLPEAQVWGYLRDTLLALAHLHSQG---LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAG 213 (311)
T ss_dssp CBHHHHHHHHC----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECGGGCEEECCCTTCEECC-----
T ss_pred CCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEECCCCCEEEccceeeeecccCCCC
Confidence 79998886532 34999999999999999999999998 999999999999999999999999998766433
Q ss_pred CCCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhccccC
Q 005693 543 ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQN 622 (682)
Q Consensus 543 ~~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~ 622 (682)
....||+.|+|||++.+ .++.++|||||||++|||++|..|+.... .+ ... .... ..... .
T Consensus 214 ~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~--------~~-~~~-~~~~----~~~~~--~-- 274 (311)
T 3p1a_A 214 EVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGE--------GW-QQL-RQGY----LPPEF--T-- 274 (311)
T ss_dssp -CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHH--------HH-HHH-TTTC----CCHHH--H--
T ss_pred cccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCcc--------HH-HHH-hccC----CCccc--c--
Confidence 23457899999999876 78999999999999999999977765321 01 111 1111 11111 0
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 623 IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 623 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
......+.+++.+||+.||++|||++|++++
T Consensus 275 -~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 305 (311)
T 3p1a_A 275 -AGLSSELRSVLVMMLEPDPKLRATAEALLAL 305 (311)
T ss_dssp -TTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred -cCCCHHHHHHHHHHcCCChhhCcCHHHHHhC
Confidence 1123456778889999999999999999863
No 104
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.2e-38 Score=326.63 Aligned_cols=248 Identities=23% Similarity=0.351 Sum_probs=200.7
Q ss_pred ccccccCeEEEEEEEEc---CCceEEEEEeecccc--ChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccC
Q 005693 391 EVLGKGSYGTAYKAVLE---ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 465 (682)
Q Consensus 391 ~~lG~G~fg~Vy~~~~~---~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~ 465 (682)
+.||+|+||.||+|.+. ++..||+|+++.... ..+.+.+|++++.++ +||||+++++++ ..+..++||||+++
T Consensus 16 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~-~~~~~~lv~e~~~~ 93 (287)
T 1u59_A 16 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQL-DNPYIVRLIGVC-QAEALMLVMEMAGG 93 (287)
T ss_dssp EEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEE-ESSSEEEEEECCTT
T ss_pred ccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhC-CCCCEeEEEEEe-cCCCcEEEEEeCCC
Confidence 47999999999999864 567899999976432 345688999999999 899999999999 55678999999999
Q ss_pred CchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCCC--
Q 005693 466 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA-- 543 (682)
Q Consensus 466 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~-- 543 (682)
|+|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 94 ~~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~ 166 (287)
T 1u59_A 94 GPLHKFLVGK----REEIPVSNVAELLHQVSMGMKYLEEKN---FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSY 166 (287)
T ss_dssp EEHHHHHTTC----TTTSCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCE
T ss_pred CCHHHHHHhC----CccCCHHHHHHHHHHHHHHHHHHHHCC---EeeCCCchheEEEcCCCCEEECcccceeeeccCcce
Confidence 9999999643 234899999999999999999999998 9999999999999999999999999997654322
Q ss_pred -----CCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhh
Q 005693 544 -----TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVEL 617 (682)
Q Consensus 544 -----~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-g~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 617 (682)
...+++.|+|||++.+..++.++||||||+++|||++ |+.||......+ ....+.... ..
T Consensus 167 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~------~~~~i~~~~-~~------- 232 (287)
T 1u59_A 167 YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE------VMAFIEQGK-RM------- 232 (287)
T ss_dssp ECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHH------HHHHHHTTC-CC-------
T ss_pred eeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHH------HHHHHhcCC-cC-------
Confidence 2235678999999998889999999999999999999 999997543221 111111111 00
Q ss_pred ccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCCC
Q 005693 618 MRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSE 664 (682)
Q Consensus 618 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~~~~ 664 (682)
.........+.+++.+||+.+|++||+++|++++|+++......
T Consensus 233 ---~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~ 276 (287)
T 1u59_A 233 ---ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLAS 276 (287)
T ss_dssp ---CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHT
T ss_pred ---CCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCC
Confidence 00112234567788899999999999999999999999876544
No 105
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=5.1e-39 Score=337.90 Aligned_cols=256 Identities=22% Similarity=0.339 Sum_probs=201.0
Q ss_pred hccccccCeEEEEEEEEc-----CCceEEEEEeecccc--ChhhHHHHHHHHHHhcCCCceeceEEEEEec--CceEEEE
Q 005693 390 AEVLGKGSYGTAYKAVLE-----ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSK--DEKLLVY 460 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-----~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~--~~~~lV~ 460 (682)
.+.||+|+||+||++.+. +++.||+|+++.... ..+.+.+|+++++++ +||||+++++++.+. ...++||
T Consensus 36 ~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~lv~ 114 (318)
T 3lxp_A 36 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTL-YHEHIIKYKGCCEDAGAASLQLVM 114 (318)
T ss_dssp EEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTTTEEEEEE
T ss_pred hheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhC-CCcchhhEEEEEecCCCceEEEEE
Confidence 478999999999998753 577899999976532 245688999999999 899999999999874 5678999
Q ss_pred eeccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCC
Q 005693 461 DYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN 540 (682)
Q Consensus 461 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~ 540 (682)
||+++|+|.+++... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++....
T Consensus 115 e~~~~~~L~~~l~~~------~~~~~~~~~i~~~l~~~l~~LH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~ 185 (318)
T 3lxp_A 115 EYVPLGSLRDYLPRH------SIGLAQLLLFAQQICEGMAYLHAQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 185 (318)
T ss_dssp CCCTTCBHHHHGGGS------CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCGGGCEECC
T ss_pred ecccCCcHHHHHhhC------CCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEEcCCCCEEECCcccccccc
Confidence 999999999999743 2899999999999999999999998 9999999999999999999999999997765
Q ss_pred CCC-------CCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCC-----CCC-hh--HHHHHHhh
Q 005693 541 VPA-------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDD-----MVD-LP--RWVQSVVR 605 (682)
Q Consensus 541 ~~~-------~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~-----~~~-l~--~~~~~~~~ 605 (682)
... ...+++.|+|||++.+..++.++||||||+++|||+||+.||....... ... .. ........
T Consensus 186 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (318)
T 3lxp_A 186 EGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLE 265 (318)
T ss_dssp TTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHH
T ss_pred ccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHh
Confidence 432 2346777999999999889999999999999999999999986432100 000 00 00000011
Q ss_pred hccccccchhhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCCCC
Q 005693 606 EEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSEN 665 (682)
Q Consensus 606 ~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~~~~~ 665 (682)
... ...........+.+++.+||+.||++|||++|+++.|+++.+.....
T Consensus 266 ~~~----------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~~~ 315 (318)
T 3lxp_A 266 RGE----------RLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQGQ 315 (318)
T ss_dssp TTC----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHC-
T ss_pred ccc----------CCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhccC
Confidence 000 01111223456778888999999999999999999999998766543
No 106
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=3e-38 Score=360.48 Aligned_cols=247 Identities=23% Similarity=0.359 Sum_probs=199.6
Q ss_pred cccccCeEEEEEEEEc---CCceEEEEEeeccc--cChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccCC
Q 005693 392 VLGKGSYGTAYKAVLE---ESTTVVVKRLKEVV--VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 466 (682)
Q Consensus 392 ~lG~G~fg~Vy~~~~~---~~~~vavK~l~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g 466 (682)
.||+|+||.||+|.+. ++..||||+++... ...+++.+|++++.++ +|||||++++++.. +..++||||+++|
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l-~hpniv~l~~~~~~-~~~~lv~E~~~~g 420 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQL-DNPYIVRLIGVCQA-EALMLVMEMAGGG 420 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTC-CCTTBCCEEEEEES-SSEEEEEECCTTC
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhC-CCCCEeeEEEEecc-CCeEEEEEeCCCC
Confidence 6999999999999874 45679999997653 2457899999999999 99999999999976 5789999999999
Q ss_pred chhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCCCC--
Q 005693 467 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPAT-- 544 (682)
Q Consensus 467 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~~-- 544 (682)
+|.+++... ...+++..+..++.||+.||+|||+++ |+||||||+|||+++++.+||+|||+++.......
T Consensus 421 ~L~~~l~~~----~~~l~~~~~~~i~~qi~~~L~~LH~~~---iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 493 (613)
T 2ozo_A 421 PLHKFLVGK----REEIPVSNVAELLHQVSMGMKYLEEKN---FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYY 493 (613)
T ss_dssp BHHHHHTTC----TTTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCSTTTTCC------
T ss_pred cHHHHHhhc----cCCCCHHHHHHHHHHHHHHHHHHHHCC---EEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCcee
Confidence 999999743 234899999999999999999999998 99999999999999999999999999987643321
Q ss_pred -----CCCCCcccCccccccCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhc
Q 005693 545 -----PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELM 618 (682)
Q Consensus 545 -----~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-g~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 618 (682)
..+++.|+|||++.+..++.++|||||||++|||++ |+.||.+....+ ....+ ......
T Consensus 494 ~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~------~~~~i-~~~~~~-------- 558 (613)
T 2ozo_A 494 TARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE------VMAFI-EQGKRM-------- 558 (613)
T ss_dssp --------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHH------HHHHH-HTTCCC--------
T ss_pred eeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHH------HHHHH-HcCCCC--------
Confidence 123578999999999999999999999999999998 999998654322 11111 111110
Q ss_pred cccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCCC
Q 005693 619 RFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSE 664 (682)
Q Consensus 619 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~~~~ 664 (682)
.....+...+.+++.+||+.+|++||+++++++.|+.+......
T Consensus 559 --~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~~~ 602 (613)
T 2ozo_A 559 --ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLAS 602 (613)
T ss_dssp --CCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHHSC
T ss_pred --CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHhcc
Confidence 11112345677888899999999999999999999998766543
No 107
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=1.2e-38 Score=332.06 Aligned_cols=252 Identities=24% Similarity=0.334 Sum_probs=196.0
Q ss_pred hccccccCeEEEEEEEE-----cCCceEEEEEeecccc--ChhhHHHHHHHHHHhcCCCceeceEEEEEec--CceEEEE
Q 005693 390 AEVLGKGSYGTAYKAVL-----EESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSK--DEKLLVY 460 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~-----~~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~--~~~~lV~ 460 (682)
.+.||+|+||.||+|++ .+++.||+|+++.... ..+.+.+|++++.++ +||||+++++++... ...++||
T Consensus 26 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~~lv~ 104 (302)
T 4e5w_A 26 IRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNL-YHENIVKYKGICTEDGGNGIKLIM 104 (302)
T ss_dssp EEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTC-CCTTBCCEEEEEEC---CCEEEEE
T ss_pred hhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhC-CCCCeeeeeeEEecCCCceEEEEE
Confidence 47899999999999984 3578899999975432 346789999999999 899999999999876 6689999
Q ss_pred eeccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCC
Q 005693 461 DYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN 540 (682)
Q Consensus 461 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~ 540 (682)
||+++|+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++....
T Consensus 105 e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 177 (302)
T 4e5w_A 105 EFLPSGSLKEYLPKNK----NKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKAIE 177 (302)
T ss_dssp ECCTTCBHHHHHHHHT----TTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred EeCCCCcHHHHHHhcc----ccCCHHHHHHHHHHHHHHHHHhhcCC---cccCCCchheEEEcCCCCEEECccccccccc
Confidence 9999999999996432 34899999999999999999999998 9999999999999999999999999997664
Q ss_pred CCC-------CCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCC--------CCCCChhHHHHHHhh
Q 005693 541 VPA-------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTR--------DDMVDLPRWVQSVVR 605 (682)
Q Consensus 541 ~~~-------~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~--------~~~~~l~~~~~~~~~ 605 (682)
... ...++..|+|||++.+..++.++||||||+++|||++|+.|+..... ...............
T Consensus 178 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (302)
T 4e5w_A 178 TDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLK 257 (302)
T ss_dssp TTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHH
T ss_pred CCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHh
Confidence 332 33467779999999998999999999999999999999998653210 000000000011111
Q ss_pred hccccccchhhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhh
Q 005693 606 EEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVR 659 (682)
Q Consensus 606 ~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~ 659 (682)
... ...........+.+++.+||+.||++|||++|+++.|+++.
T Consensus 258 ~~~----------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 258 EGK----------RLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp TTC----------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ccC----------CCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 100 00111123345778888999999999999999999999875
No 108
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=1.1e-38 Score=339.44 Aligned_cols=256 Identities=16% Similarity=0.225 Sum_probs=188.8
Q ss_pred hccccccCeEEEEEEEEc----CCceEEEEEeecccc------------ChhhHHHHHHHHHHhcCCCceeceEEEEEe-
Q 005693 390 AEVLGKGSYGTAYKAVLE----ESTTVVVKRLKEVVV------------GKRDFEQQMEIVGRVGQHPNVVPLRAYYYS- 452 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~----~~~~vavK~l~~~~~------------~~~~~~~e~~~l~~l~~h~niv~l~~~~~~- 452 (682)
.+.||+|+||.||+|... .+..+|+|+...... ....+.+|+..+..+ +||||+++++++..
T Consensus 42 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l-~h~ni~~~~~~~~~~ 120 (345)
T 2v62_A 42 GKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQL-DYLGIPLFYGSGLTE 120 (345)
T ss_dssp EEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTC-SCCCCCCEEEEEEEE
T ss_pred EeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccc-cccCcceeecccccc
Confidence 478999999999999986 467899999875421 122355666677777 89999999999988
Q ss_pred ---cCceEEEEeeccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCC--C
Q 005693 453 ---KDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDL--D 527 (682)
Q Consensus 453 ---~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~--~ 527 (682)
....++||||+ +++|.+++.... .+++..++.++.||+.||+|||+.+ |+||||||+||+++.++ .
T Consensus 121 ~~~~~~~~lv~e~~-~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~ 191 (345)
T 2v62_A 121 FKGRSYRFMVMERL-GIDLQKISGQNG-----TFKKSTVLQLGIRMLDVLEYIHENE---YVHGDIKAANLLLGYKNPDQ 191 (345)
T ss_dssp SSSCEEEEEEEECE-EEEHHHHCBGGG-----BCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEESSSTTS
T ss_pred cCCCcEEEEEEecc-CCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCcCHHHEEEccCCCCc
Confidence 67889999999 999999997532 5899999999999999999999998 99999999999999887 9
Q ss_pred eEEeecCCCCCCCCC-----------CCCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCCh
Q 005693 528 GCISDFGLTPLMNVP-----------ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDL 596 (682)
Q Consensus 528 ~kl~DfGla~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l 596 (682)
+||+|||+++..... ....+++.|+|||++.+..++.++|||||||++|||++|+.||........ .
T Consensus 192 ~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~--~ 269 (345)
T 2v62_A 192 VYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPV--A 269 (345)
T ss_dssp EEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHH--H
T ss_pred EEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccH--H
Confidence 999999999755321 233578899999999998999999999999999999999999964321110 0
Q ss_pred hHHHHHHhhhccccccchhhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcC
Q 005693 597 PRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 662 (682)
Q Consensus 597 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~~ 662 (682)
........... . ................+.+++.+||+.||++||+++++++.|+++....
T Consensus 270 ~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~ 330 (345)
T 2v62_A 270 VQTAKTNLLDE----L-PQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGIPL 330 (345)
T ss_dssp HHHHHHHHHHT----T-THHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCCCC
T ss_pred HHHHHHhhccc----c-cHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCCcc
Confidence 01111111110 0 0000000000022345777888999999999999999999999876533
No 109
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=2e-38 Score=340.71 Aligned_cols=242 Identities=22% Similarity=0.358 Sum_probs=192.1
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeeccc-cChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccCCc
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV-VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGS 467 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~ 467 (682)
.+.||+|+||.||+|... +++.||+|+++... ...+.+.+|++++.++ +||||+++++++...+..++||||+++|+
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~lv~E~~~~~~ 172 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQL-DHANLIQLYDAFESKNDIVLVMEYVDGGE 172 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEEECCTTCE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhC-CCCCCCeEEEEEEECCEEEEEEeCCCCCc
Confidence 357999999999999975 57889999997653 2356789999999999 99999999999999999999999999999
Q ss_pred hhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEe--cCCCCeEEeecCCCCCCCCCC--
Q 005693 468 LSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLI--NQDLDGCISDFGLTPLMNVPA-- 543 (682)
Q Consensus 468 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl--~~~~~~kl~DfGla~~~~~~~-- 543 (682)
|.+++.... ..+++..+..++.||+.||+|||+.+ |+||||||+|||+ ++++.+||+|||+++......
T Consensus 173 L~~~l~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~ 245 (373)
T 2x4f_A 173 LFDRIIDES----YNLTELDTILFMKQICEGIRHMHQMY---ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKL 245 (373)
T ss_dssp EHHHHHHTG----GGCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBC
T ss_pred HHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEEecCCCCcEEEEeCCCceecCCcccc
Confidence 999886432 34899999999999999999999998 9999999999999 567889999999998765432
Q ss_pred -CCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhccccC
Q 005693 544 -TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQN 622 (682)
Q Consensus 544 -~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~ 622 (682)
...+|+.|+|||++.+..++.++|||||||++|||++|+.||.+... ......+....+... . .....
T Consensus 246 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~------~~~~~~i~~~~~~~~--~---~~~~~ 314 (373)
T 2x4f_A 246 KVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDND------AETLNNILACRWDLE--D---EEFQD 314 (373)
T ss_dssp CCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHHHHHHTCCCSC--S---GGGTT
T ss_pred ccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHhccCCCC--h---hhhcc
Confidence 34588999999999998999999999999999999999999975432 122223322222110 0 01112
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005693 623 IEEEMVQMLQIGMACVAKVPDMRPNMDEVVR 653 (682)
Q Consensus 623 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 653 (682)
. ...+.+++.+||+.||++|||++|+++
T Consensus 315 ~---~~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 315 I---SEEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp S---CHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred C---CHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 2 245667778999999999999999998
No 110
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.2e-38 Score=327.98 Aligned_cols=251 Identities=23% Similarity=0.350 Sum_probs=197.8
Q ss_pred hccccccCeEEEEEEEEcCC----ceEEEEEeecccc--ChhhHHHHHHHHHHhcCCCceeceEEEEEecCce-EEEEee
Q 005693 390 AEVLGKGSYGTAYKAVLEES----TTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEK-LLVYDY 462 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~~----~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~-~lV~e~ 462 (682)
.+.||+|+||+||+|.+.++ ..+|+|++..... ..+.+.+|++++.++ +||||+++++++.+.+.. ++||||
T Consensus 26 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~v~e~ 104 (298)
T 3pls_A 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGL-NHPNVLALIGIMLPPEGLPHVLLPY 104 (298)
T ss_dssp EEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTC-CCTTBCCCCEEECCSSSCCEEEECC
T ss_pred CceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhC-CCCCeeeEEEEEecCCCCcEEEEec
Confidence 47899999999999986432 2689999875432 235688999999999 899999999999876665 999999
Q ss_pred ccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCC
Q 005693 463 FASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP 542 (682)
Q Consensus 463 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~ 542 (682)
+.+|+|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++.....
T Consensus 105 ~~~~~L~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 177 (298)
T 3pls_A 105 MCHGDLLQFIRSP----QRNPTVKDLISFGLQVARGMEYLAEQK---FVHRDLAARNCMLDESFTVKVADFGLARDILDR 177 (298)
T ss_dssp CTTCBHHHHHHCT----TCCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECCTTSSCTTTTG
T ss_pred ccCCCHHHHHhcc----ccCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCcEEeCcCCCcccccCC
Confidence 9999999999753 234899999999999999999999998 999999999999999999999999999754321
Q ss_pred --------CCCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCC-CCCCCCCCChhHHHHHHhhhccccccc
Q 005693 543 --------ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQ-SPTRDDMVDLPRWVQSVVREEWTAEVF 613 (682)
Q Consensus 543 --------~~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~-~~~~~~~~~l~~~~~~~~~~~~~~~~~ 613 (682)
....+++.|+|||.+.+..++.++||||||+++|||++|..|+. ..... .+. .... .....
T Consensus 178 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~---~~~---~~~~-~~~~~--- 247 (298)
T 3pls_A 178 EYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPF---DLT---HFLA-QGRRL--- 247 (298)
T ss_dssp GGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGG---GHH---HHHH-TTCCC---
T ss_pred cccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHH---HHH---HHhh-cCCCC---
Confidence 22345778999999999999999999999999999999665543 32211 111 1111 11000
Q ss_pred hhhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCCCC
Q 005693 614 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSEN 665 (682)
Q Consensus 614 d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~~~~~ 665 (682)
.........+.+++.+||+.||++|||++|+++.|+++.......
T Consensus 248 -------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~~ 292 (298)
T 3pls_A 248 -------PQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLGD 292 (298)
T ss_dssp -------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCSC
T ss_pred -------CCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHhcc
Confidence 001112245677888999999999999999999999998776544
No 111
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9.7e-39 Score=343.09 Aligned_cols=252 Identities=25% Similarity=0.406 Sum_probs=192.6
Q ss_pred hccccccCeEEEEEEEEcC--C--ceEEEEEeecccc--ChhhHHHHHHHHHHhcCCCceeceEEEEEe-cCceEEEEee
Q 005693 390 AEVLGKGSYGTAYKAVLEE--S--TTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYS-KDEKLLVYDY 462 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~--~--~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~-~~~~~lV~e~ 462 (682)
.+.||+|+||+||+|...+ + ..||+|.++.... ..+++.+|+.++.++ +||||+++++++.. ++..++||||
T Consensus 94 ~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~~lv~e~ 172 (373)
T 3c1x_A 94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF-SHPNVLSLLGICLRSEGSPLVVLPY 172 (373)
T ss_dssp EEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTC-CCTTBCCCCEEECCCSSCCEEEEEC
T ss_pred CcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCCCCeEEEEEC
Confidence 4689999999999998642 2 3588998865432 245788999999999 89999999998754 4578999999
Q ss_pred ccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCC
Q 005693 463 FASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP 542 (682)
Q Consensus 463 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~ 542 (682)
+++|+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++.....
T Consensus 173 ~~~g~L~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 245 (373)
T 3c1x_A 173 MKHGDLRNFIRNET----HNPTVKDLIGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 245 (373)
T ss_dssp CTTCBHHHHHHCTT----CCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred CCCCCHHHHHhhcc----cCCCHHHHHHHHHHHHHHHHHHHHCC---EecCccchheEEECCCCCEEEeecccccccccc
Confidence 99999999997532 34789999999999999999999998 999999999999999999999999999765322
Q ss_pred C--------CCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccc
Q 005693 543 A--------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 613 (682)
Q Consensus 543 ~--------~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-g~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 613 (682)
. ...+++.|+|||++.+..++.++||||||+++|||+| |.+||......+ +... ....... .
T Consensus 246 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~---~~~~---~~~~~~~---~ 316 (373)
T 3c1x_A 246 EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD---ITVY---LLQGRRL---L 316 (373)
T ss_dssp ------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSC---HHHH---HHTTCCC---C
T ss_pred ccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHH---HHHH---HHcCCCC---C
Confidence 1 2235678999999999999999999999999999999 677887544322 1111 1111100 0
Q ss_pred hhhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCCCCC
Q 005693 614 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSENR 666 (682)
Q Consensus 614 d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~~~~~~ 666 (682)
.. ......+.+++.+||+.||++|||++|+++.|+++......+.
T Consensus 317 -----~p---~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~~~ 361 (373)
T 3c1x_A 317 -----QP---EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEH 361 (373)
T ss_dssp -----CC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCSCC
T ss_pred -----CC---CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhccccc
Confidence 01 1223456778889999999999999999999999997766543
No 112
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=5.5e-38 Score=334.15 Aligned_cols=242 Identities=24% Similarity=0.375 Sum_probs=196.5
Q ss_pred hccccccCeEEEEEEEE-cCCceEEEEEeeccccC----hhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeecc
Q 005693 390 AEVLGKGSYGTAYKAVL-EESTTVVVKRLKEVVVG----KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 464 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~----~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~ 464 (682)
.+.||+|+||+||+|+. .+++.||+|++...... .+++.+|++++.++ +||||+++++++..++..++||||++
T Consensus 59 ~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~~~ 137 (348)
T 1u5q_A 59 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-RHPNTIQYRGCYLREHTAWLVMEYCL 137 (348)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred eeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEECCeEEEEEecCC
Confidence 46799999999999997 46788999999754322 24688999999999 89999999999999999999999997
Q ss_pred CCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCCCC
Q 005693 465 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPAT 544 (682)
Q Consensus 465 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~~ 544 (682)
|+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++........
T Consensus 138 -g~l~~~l~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~ 209 (348)
T 1u5q_A 138 -GSASDLLEVHK----KPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANS 209 (348)
T ss_dssp -EEHHHHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCC
T ss_pred -CCHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEeeccCceecCCCCc
Confidence 68888875322 34899999999999999999999998 99999999999999999999999999988877777
Q ss_pred CCCCCcccCccccc---cCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhcccc
Q 005693 545 PSRSAGYRAPEVIE---TRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQ 621 (682)
Q Consensus 545 ~~~~~~y~aPE~~~---~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 621 (682)
..+|+.|+|||++. ...++.++|||||||++|||++|+.||..... ............. .. ...
T Consensus 210 ~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~------~~~~~~~~~~~~~-~~------~~~ 276 (348)
T 1u5q_A 210 FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA------MSALYHIAQNESP-AL------QSG 276 (348)
T ss_dssp CCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHHHHHHSCCC-CC------CCT
T ss_pred ccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh------HHHHHHHHhcCCC-CC------CCC
Confidence 78999999999984 56789999999999999999999999975431 1122222211110 00 011
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 005693 622 NIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIE 656 (682)
Q Consensus 622 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~ 656 (682)
. ....+.+++.+||+.||++|||++|++++..
T Consensus 277 ~---~~~~l~~li~~~l~~dP~~Rps~~~ll~h~~ 308 (348)
T 1u5q_A 277 H---WSEYFRNFVDSCLQKIPQDRPTSEVLLKHRF 308 (348)
T ss_dssp T---SCHHHHHHHHHHTCSSGGGSCCHHHHTTCHH
T ss_pred C---CCHHHHHHHHHHcccChhhCcCHHHHhhChh
Confidence 1 1234567778999999999999999987644
No 113
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=7.3e-38 Score=338.61 Aligned_cols=261 Identities=23% Similarity=0.355 Sum_probs=196.7
Q ss_pred hcccccc--CeEEEEEEEEc-CCceEEEEEeeccccC---hhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeec
Q 005693 390 AEVLGKG--SYGTAYKAVLE-ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYF 463 (682)
Q Consensus 390 ~~~lG~G--~fg~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~ 463 (682)
.+.||+| +||.||+|+.. +++.||+|+++..... .+.+.+|+++++++ +||||+++++++.+++..++||||+
T Consensus 30 ~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~ 108 (389)
T 3gni_B 30 LTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLF-NHPNIVPYRATFIADNELWVVTSFM 108 (389)
T ss_dssp EEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEECC
T ss_pred EecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhC-CCCCCCcEeEEEEECCEEEEEEEcc
Confidence 4789999 99999999986 5789999999765433 24577899999999 8999999999999999999999999
Q ss_pred cCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCC---
Q 005693 464 ASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN--- 540 (682)
Q Consensus 464 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~--- 540 (682)
++|+|.+++.... ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||.+....
T Consensus 109 ~~~~L~~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~ 182 (389)
T 3gni_B 109 AYGSAKDLICTHF---MDGMNELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVDGKVYLSGLRSNLSMISHG 182 (389)
T ss_dssp TTCBHHHHHHHTC---TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCGGGCEECEETT
T ss_pred CCCCHHHHHhhhc---ccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEcccccceeecccc
Confidence 9999999997543 234899999999999999999999998 9999999999999999999999999874321
Q ss_pred --------CCCCCCCCCcccCcccccc--CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhh-----
Q 005693 541 --------VPATPSRSAGYRAPEVIET--RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVR----- 605 (682)
Q Consensus 541 --------~~~~~~~~~~y~aPE~~~~--~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~----- 605 (682)
......+++.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+.. .........
T Consensus 183 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~--~~~~~~~~~~~~~~ 260 (389)
T 3gni_B 183 QRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQML--LEKLNGTVPCLLDT 260 (389)
T ss_dssp EECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHH--HHC-----------
T ss_pred ccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHH--HHHhcCCCCccccc
Confidence 1223357888999999987 57899999999999999999999999865433211 000000000
Q ss_pred -----hc------------cccccch--------hhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHHh
Q 005693 606 -----EE------------WTAEVFD--------VELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM--IEEV 658 (682)
Q Consensus 606 -----~~------------~~~~~~d--------~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~--L~~i 658 (682)
+. ...+... ...............+.+++.+||+.||++|||++|++++ ++++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~~ 340 (389)
T 3gni_B 261 STIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQI 340 (389)
T ss_dssp ---------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGGC
T ss_pred cccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHHH
Confidence 00 0000000 0000000111223457788889999999999999999975 5444
Q ss_pred h
Q 005693 659 R 659 (682)
Q Consensus 659 ~ 659 (682)
.
T Consensus 341 ~ 341 (389)
T 3gni_B 341 K 341 (389)
T ss_dssp -
T ss_pred h
Confidence 4
No 114
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=2.5e-38 Score=336.88 Aligned_cols=238 Identities=18% Similarity=0.202 Sum_probs=196.7
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeeccc----cChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeecc
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 464 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~ 464 (682)
.+.||+|+||.||+|+.. +++.||+|++.... ...+.+.+|++++..+ +||||+++++++.+.+..++||||++
T Consensus 46 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~ 124 (350)
T 1rdq_E 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVA 124 (350)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred EEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEcCCEEEEEEcCCC
Confidence 468999999999999976 57889999997542 2345688899999998 99999999999999999999999999
Q ss_pred CCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCC-C
Q 005693 465 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP-A 543 (682)
Q Consensus 465 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~-~ 543 (682)
+|+|.+++... ..+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 125 gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~~ 196 (350)
T 1rdq_E 125 GGEMFSHLRRI-----GRFSEPHARFYAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196 (350)
T ss_dssp TCBHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECSSCBC
T ss_pred CCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCccceEEECCCCCEEEcccccceeccCCcc
Confidence 99999999743 23899999999999999999999998 999999999999999999999999999766443 3
Q ss_pred CCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhccccCh
Q 005693 544 TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNI 623 (682)
Q Consensus 544 ~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~ 623 (682)
...||+.|+|||++.+..++.++|||||||++|||++|+.||.+... ......+...... ....
T Consensus 197 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~------~~~~~~i~~~~~~---------~p~~- 260 (350)
T 1rdq_E 197 TLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP------IQIYEKIVSGKVR---------FPSH- 260 (350)
T ss_dssp CCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHCCCC---------CCTT-
T ss_pred cccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCH------HHHHHHHHcCCCC---------CCCC-
Confidence 45689999999999999999999999999999999999999975432 1222222221110 0111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCC-----HHHHHHH
Q 005693 624 EEEMVQMLQIGMACVAKVPDMRPN-----MDEVVRM 654 (682)
Q Consensus 624 ~~~~~~l~~l~~~Cl~~dP~~RPt-----~~evl~~ 654 (682)
....+.+++.+||+.||++||+ ++|++++
T Consensus 261 --~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h 294 (350)
T 1rdq_E 261 --FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294 (350)
T ss_dssp --CCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred --CCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhC
Confidence 2234667778999999999998 8888873
No 115
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=3.8e-38 Score=332.61 Aligned_cols=238 Identities=22% Similarity=0.343 Sum_probs=187.5
Q ss_pred hccccccCeEEEEEEEE----cCCceEEEEEeecccc-----ChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEE
Q 005693 390 AEVLGKGSYGTAYKAVL----EESTTVVVKRLKEVVV-----GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVY 460 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~----~~~~~vavK~l~~~~~-----~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~ 460 (682)
.+.||+|+||.||+++. .+++.||+|+++.... ....+.+|++++..+ +||||+++++++..++..++||
T Consensus 22 ~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~ 100 (327)
T 3a62_A 22 LRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV-KHPFIVDLIYAFQTGGKLYLIL 100 (327)
T ss_dssp EEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHC-CCTTBCCEEEEEECSSCEEEEE
T ss_pred EEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhC-CCCCccceeEEEEcCCEEEEEE
Confidence 47899999999999997 4688999999976431 234577899999999 8999999999999999999999
Q ss_pred eeccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCC
Q 005693 461 DYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN 540 (682)
Q Consensus 461 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~ 540 (682)
||+++|+|.+++... ..+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++...
T Consensus 101 e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~ 172 (327)
T 3a62_A 101 EYLSGGELFMQLERE-----GIFMEDTACFYLAEISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESI 172 (327)
T ss_dssp ECCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTTSCEEECCCSCC----
T ss_pred eCCCCCcHHHHHHhC-----CCCCHHHHHHHHHHHHHHHHHHHhCC---EEcccCCHHHeEECCCCcEEEEeCCcccccc
Confidence 999999999999743 24889999999999999999999998 9999999999999999999999999987643
Q ss_pred CC----CCCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhh
Q 005693 541 VP----ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVE 616 (682)
Q Consensus 541 ~~----~~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 616 (682)
.. ....||+.|+|||++.+..++.++||||||+++|||++|+.||.+.... .....+......
T Consensus 173 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~------~~~~~i~~~~~~------- 239 (327)
T 3a62_A 173 HDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRK------KTIDKILKCKLN------- 239 (327)
T ss_dssp ------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH------HHHHHHHHTCCC-------
T ss_pred cCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHH------HHHHHHHhCCCC-------
Confidence 22 2345889999999999999999999999999999999999999754321 122222221110
Q ss_pred hccccChHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 005693 617 LMRFQNIEEEMVQMLQIGMACVAKVPDMRP-----NMDEVVRM 654 (682)
Q Consensus 617 l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~evl~~ 654 (682)
.... ....+.+++.+||+.||++|| +++|++++
T Consensus 240 --~p~~---~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h 277 (327)
T 3a62_A 240 --LPPY---LTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAH 277 (327)
T ss_dssp --CCTT---SCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred --CCCC---CCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcC
Confidence 0111 223566777899999999999 78888873
No 116
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=1.2e-38 Score=338.37 Aligned_cols=244 Identities=24% Similarity=0.370 Sum_probs=193.4
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeeccccChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccCCch
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL 468 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~L 468 (682)
.+.||+|+||.||+|..+ +++.||+|+++... ....+|++++.++.+||||+++++++.+++..++||||+++|+|
T Consensus 27 ~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~---~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L 103 (342)
T 2qr7_A 27 KEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK---RDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGEL 103 (342)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEETTT---CCCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEccc---CChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCCCCcH
Confidence 578999999999999976 47789999997643 34567888898887899999999999999999999999999999
Q ss_pred hHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCC----CCeEEeecCCCCCCCCC--
Q 005693 469 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQD----LDGCISDFGLTPLMNVP-- 542 (682)
Q Consensus 469 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~----~~~kl~DfGla~~~~~~-- 542 (682)
.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||+.++ +.+||+|||+++.....
T Consensus 104 ~~~i~~~-----~~~~~~~~~~~~~qi~~al~~lH~~g---ivHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~ 175 (342)
T 2qr7_A 104 LDKILRQ-----KFFSEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENG 175 (342)
T ss_dssp HHHHHTC-----TTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTC
T ss_pred HHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCC
Confidence 9999743 34899999999999999999999998 9999999999998543 34999999999765432
Q ss_pred --CCCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhccc
Q 005693 543 --ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 620 (682)
Q Consensus 543 --~~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 620 (682)
....+|+.|+|||++.+..++.++|||||||++|||++|+.||...... ........+....... .....
T Consensus 176 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~---~~~~~~~~i~~~~~~~-----~~~~~ 247 (342)
T 2qr7_A 176 LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDD---TPEEILARIGSGKFSL-----SGGYW 247 (342)
T ss_dssp CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTS---CHHHHHHHHHHCCCCC-----CSTTT
T ss_pred ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcC---CHHHHHHHHccCCccc-----Ccccc
Confidence 2456789999999998888999999999999999999999999754322 2222222222221110 00001
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 005693 621 QNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMI 655 (682)
Q Consensus 621 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L 655 (682)
... ...+.+++.+||+.||++|||++|++++-
T Consensus 248 ~~~---s~~~~~li~~~L~~dP~~R~t~~~il~hp 279 (342)
T 2qr7_A 248 NSV---SDTAKDLVSKMLHVDPHQRLTAALVLRHP 279 (342)
T ss_dssp TTS---CHHHHHHHHHHTCSSTTTSCCHHHHTTSH
T ss_pred ccC---CHHHHHHHHHHCCCChhHCcCHHHHhcCC
Confidence 122 23456777799999999999999999853
No 117
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=6.2e-38 Score=330.84 Aligned_cols=255 Identities=23% Similarity=0.401 Sum_probs=201.4
Q ss_pred hccccccCeEEEEEEEEcC-Cce--EEEEEeeccc--cChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeecc
Q 005693 390 AEVLGKGSYGTAYKAVLEE-STT--VVVKRLKEVV--VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 464 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~-~~~--vavK~l~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~ 464 (682)
.+.||+|+||.||+|+... +.. +++|.++... ...+.+.+|++++.++.+||||+++++++.+.+..++||||++
T Consensus 30 ~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~ 109 (327)
T 1fvr_A 30 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAP 109 (327)
T ss_dssp EEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCCT
T ss_pred eeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEEEecCC
Confidence 5789999999999999654 443 4899887532 2345788999999999889999999999999999999999999
Q ss_pred CCchhHhhccCCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeec
Q 005693 465 SGSLSTLLHGNRG-----------AGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDF 533 (682)
Q Consensus 465 ~g~L~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~Df 533 (682)
+|+|.+++..... .....+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+||
T Consensus 110 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~~~~~kL~Df 186 (327)
T 1fvr_A 110 HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVAKIADF 186 (327)
T ss_dssp TCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGGCEEECCT
T ss_pred CCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCccceEEEcCCCeEEEccc
Confidence 9999999975430 12345899999999999999999999998 999999999999999999999999
Q ss_pred CCCCCCCCC---CCCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccc
Q 005693 534 GLTPLMNVP---ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWT 609 (682)
Q Consensus 534 Gla~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-g~~Pf~~~~~~~~~~l~~~~~~~~~~~~~ 609 (682)
|+++..... ....+++.|+|||++.+..++.++||||||+++|||+| |+.||.+... ........ ....
T Consensus 187 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~------~~~~~~~~-~~~~ 259 (327)
T 1fvr_A 187 GLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC------AELYEKLP-QGYR 259 (327)
T ss_dssp TCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCH------HHHHHHGG-GTCC
T ss_pred CcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcH------HHHHHHhh-cCCC
Confidence 998754322 22345778999999998889999999999999999998 9999975432 11122211 1110
Q ss_pred cccchhhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCCC
Q 005693 610 AEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSE 664 (682)
Q Consensus 610 ~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~~~~ 664 (682)
.. .. ......+.+++.+||+.||++|||++|+++.|+++.+....
T Consensus 260 ~~-------~~---~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~ 304 (327)
T 1fvr_A 260 LE-------KP---LNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKT 304 (327)
T ss_dssp CC-------CC---TTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSSC
T ss_pred CC-------CC---CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhcC
Confidence 00 11 11224567788899999999999999999999999876654
No 118
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=2.6e-38 Score=330.71 Aligned_cols=256 Identities=22% Similarity=0.295 Sum_probs=192.7
Q ss_pred hccccccCeEEEEEEEE-cCCceEEEEEeecccc------ChhhHHHHHHHHHHhc--CCCceeceEEEEEecC-----c
Q 005693 390 AEVLGKGSYGTAYKAVL-EESTTVVVKRLKEVVV------GKRDFEQQMEIVGRVG--QHPNVVPLRAYYYSKD-----E 455 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~------~~~~~~~e~~~l~~l~--~h~niv~l~~~~~~~~-----~ 455 (682)
.+.||+|+||+||+|+. .+++.||+|++..... ....+.+|++++.++. +||||+++++++.... .
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~~~~~ 93 (308)
T 3g33_A 14 VAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIK 93 (308)
T ss_dssp EEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSSSEEE
T ss_pred EEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCCCcee
Confidence 46899999999999996 4578899999874432 1346778888887774 4999999999998765 4
Q ss_pred eEEEEeeccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCC
Q 005693 456 KLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGL 535 (682)
Q Consensus 456 ~~lV~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGl 535 (682)
.++||||+. |+|.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+
T Consensus 94 ~~lv~e~~~-~~L~~~~~~~~---~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~ 166 (308)
T 3g33_A 94 VTLVFEHVD-QDLRTYLDKAP---PPGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGL 166 (308)
T ss_dssp EEEEEECCC-CBHHHHHHTCC---TTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCTTTEEECTTSCEEECSCSC
T ss_pred EEEEehhhh-cCHHHHHhhcc---CCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCEEEeeCcc
Confidence 789999997 59999997543 233899999999999999999999998 99999999999999999999999999
Q ss_pred CCCCCCCCC---CCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHh---hhccc
Q 005693 536 TPLMNVPAT---PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVV---REEWT 609 (682)
Q Consensus 536 a~~~~~~~~---~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~---~~~~~ 609 (682)
++....... ..+|+.|+|||++.+..++.++|||||||++|||++|+.||.+....+. +........ .+.|.
T Consensus 167 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~--~~~i~~~~~~~~~~~~~ 244 (308)
T 3g33_A 167 ARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQ--LGKIFDLIGLPPEDDWP 244 (308)
T ss_dssp TTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHH--HHHHHHHHCCCCTTTSC
T ss_pred ccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHHhCCCChhhcc
Confidence 987654332 3578899999999999999999999999999999999999976442211 001111000 01111
Q ss_pred cccc--hhhhc--cccC----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 610 AEVF--DVELM--RFQN----IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 610 ~~~~--d~~l~--~~~~----~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
.... ..... .... ..+....+.+++.+||+.||++|||++|++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 245 RDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp SSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred chhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 0000 00000 0000 01123456778889999999999999999874
No 119
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=4.4e-38 Score=335.20 Aligned_cols=242 Identities=21% Similarity=0.335 Sum_probs=182.1
Q ss_pred hccccccCeEEEEEEEEcC-CceEEEEEeeccccChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccCCch
Q 005693 390 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL 468 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~L 468 (682)
.+.||+|+||.||+|+... ++.||+|+++... ..+.+.+|++++.++ +||||+++++++...+..++||||+++|+|
T Consensus 58 ~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 135 (349)
T 2w4o_A 58 ESELGRGATSIVYRCKQKGTQKPYALKVLKKTV-DKKIVRTEIGVLLRL-SHPNIIKLKEIFETPTEISLVLELVTGGEL 135 (349)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEC-----------CHHHHHC-CCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred eeEEeeCCCEEEEEEEECCCCcEEEEEEeccch-hHHHHHHHHHHHHhC-CCCCCcceeeeEecCCeEEEEEEeCCCCCH
Confidence 4689999999999999874 6789999997643 356788899999999 899999999999999999999999999999
Q ss_pred hHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecC---CCCeEEeecCCCCCCCCC---
Q 005693 469 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQ---DLDGCISDFGLTPLMNVP--- 542 (682)
Q Consensus 469 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~---~~~~kl~DfGla~~~~~~--- 542 (682)
.+++... ..+++.++..++.|++.||+|||+.+ |+||||||+||+++. ++.+||+|||+++.....
T Consensus 136 ~~~l~~~-----~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~ 207 (349)
T 2w4o_A 136 FDRIVEK-----GYYSERDAADAVKQILEAVAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLM 207 (349)
T ss_dssp HHHHTTC-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESSSSTTCCEEECCCC-----------
T ss_pred HHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCcccEEEecCCCCCCEEEccCccccccCccccc
Confidence 9999743 34899999999999999999999998 999999999999975 889999999999866443
Q ss_pred CCCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhccccC
Q 005693 543 ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQN 622 (682)
Q Consensus 543 ~~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~ 622 (682)
....+|+.|+|||++.+..++.++|||||||++|||++|+.||......+ .....+...... ...+ ..
T Consensus 208 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-----~~~~~i~~~~~~--~~~~---~~-- 275 (349)
T 2w4o_A 208 KTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQ-----FMFRRILNCEYY--FISP---WW-- 275 (349)
T ss_dssp -----CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHH-----HHHHHHHTTCCC--CCTT---TT--
T ss_pred ccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccH-----HHHHHHHhCCCc--cCCc---hh--
Confidence 23457899999999999999999999999999999999999997543211 111222211110 0000 01
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 623 IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 623 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
......+.+++.+||+.||++|||++|++++
T Consensus 276 -~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 276 -DEVSLNAKDLVRKLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp -TTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred -hhCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1223456678889999999999999999874
No 120
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=5.7e-38 Score=343.10 Aligned_cols=244 Identities=17% Similarity=0.293 Sum_probs=194.3
Q ss_pred hccccccCeEEEEEEEEcC-CceEEEEEeeccc----cChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeecc
Q 005693 390 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 464 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~ 464 (682)
.+.||+|+||+||+|+.+. ++.||+|+++... .....+.+|..++..+ +||||+++++++.+++..++||||++
T Consensus 79 ~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~-~hp~Iv~l~~~~~~~~~~~lV~Ey~~ 157 (437)
T 4aw2_A 79 LKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNG-DSKWITTLHYAFQDDNNLYLVMDYYV 157 (437)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHS-CTTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEeeCCEEEEEEecCC
Confidence 4689999999999999875 6789999997532 2234588999999988 99999999999999999999999999
Q ss_pred CCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCCC-
Q 005693 465 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA- 543 (682)
Q Consensus 465 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~- 543 (682)
+|+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 158 gg~L~~~l~~~~----~~l~e~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~~ 230 (437)
T 4aw2_A 158 GGDLLTLLSKFE----DRLPEEMARFYLAEMVIAIDSVHQLH---YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGT 230 (437)
T ss_dssp TCBHHHHHHTTT----TCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCTTSC
T ss_pred CCcHHHHHHHcc----CCCCHHHHHHHHHHHHHHHHHHHhCC---eEecccCHHHeeEcCCCCEEEcchhhhhhcccCCC
Confidence 999999997532 34899999999999999999999998 9999999999999999999999999997654322
Q ss_pred ----CCCCCCcccCccccc-----cCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccch
Q 005693 544 ----TPSRSAGYRAPEVIE-----TRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFD 614 (682)
Q Consensus 544 ----~~~~~~~y~aPE~~~-----~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 614 (682)
...||+.|+|||++. ...++.++|||||||++|||++|+.||.+.... .....+......... .
T Consensus 231 ~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~------~~~~~i~~~~~~~~~-p 303 (437)
T 4aw2_A 231 VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLV------ETYGKIMNHKERFQF-P 303 (437)
T ss_dssp EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH------HHHHHHHTHHHHCCC-C
T ss_pred cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChh------HHHHhhhhccccccC-C
Confidence 346899999999997 556899999999999999999999999864322 122222211100000 0
Q ss_pred hhhccccChHHHHHHHHHHHHHcccCCCCC--CCCHHHHHHH
Q 005693 615 VELMRFQNIEEEMVQMLQIGMACVAKVPDM--RPNMDEVVRM 654 (682)
Q Consensus 615 ~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~--RPt~~evl~~ 654 (682)
. .....+ ..+.+++.+|+..+|++ ||+++|++++
T Consensus 304 ~---~~~~~s---~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 304 T---QVTDVS---ENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp S---SCCCSC---HHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred c---ccccCC---HHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 0 001122 34556677999888888 9999999884
No 121
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=5.5e-38 Score=336.59 Aligned_cols=248 Identities=14% Similarity=0.208 Sum_probs=198.5
Q ss_pred hccccccCeEEEEEEE------EcCCceEEEEEeeccccChhhHHHHHHHHHHhcC--CCceeceEEEEEecCceEEEEe
Q 005693 390 AEVLGKGSYGTAYKAV------LEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQ--HPNVVPLRAYYYSKDEKLLVYD 461 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~------~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~--h~niv~l~~~~~~~~~~~lV~e 461 (682)
.+.||+|+||+||+|. ...++.||+|+++.. ...++.+|++++.++.. |+||+++++++..++..++|||
T Consensus 70 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~lv~e 147 (365)
T 3e7e_A 70 HHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA--NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGE 147 (365)
T ss_dssp EEEEEECSSEEEEEEEC-------CCCCEEEEEESSC--CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEEEEEC
T ss_pred EEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC--ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcEEEEe
Confidence 4689999999999994 456788999998753 35678888888888732 8999999999999999999999
Q ss_pred eccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecC-----------CCCeEE
Q 005693 462 YFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQ-----------DLDGCI 530 (682)
Q Consensus 462 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~-----------~~~~kl 530 (682)
|+++|+|.++++.........+++..++.++.||+.||+|||+.+ |+||||||+|||++. ++.+||
T Consensus 148 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~---ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl 224 (365)
T 3e7e_A 148 LYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCE---IIHGDIKPDNFILGNGFLEQDDEDDLSAGLAL 224 (365)
T ss_dssp CCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECGGGTCC------CTTEEE
T ss_pred ccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCC---eecCCCCHHHEEecccccCccccccccCCEEE
Confidence 999999999997543323445999999999999999999999998 999999999999998 899999
Q ss_pred eecCCCCCCC---C---CCCCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHh
Q 005693 531 SDFGLTPLMN---V---PATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVV 604 (682)
Q Consensus 531 ~DfGla~~~~---~---~~~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~ 604 (682)
+|||+|+... . .....||+.|+|||++.+..++.++|||||||++|||+||+.||........
T Consensus 225 ~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~----------- 293 (365)
T 3e7e_A 225 IDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGEC----------- 293 (365)
T ss_dssp CCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEE-----------
T ss_pred eeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCce-----------
Confidence 9999996432 1 1234589999999999999999999999999999999999999964322110
Q ss_pred hhccccccchhhhccccChHHHHHHHHHHHHHcccCCCCCC-CCHHHHHHHHHHhhhcCCC
Q 005693 605 REEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMR-PNMDEVVRMIEEVRQSDSE 664 (682)
Q Consensus 605 ~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~R-Pt~~evl~~L~~i~~~~~~ 664 (682)
. .+..+... ...+ .+.+++..|++.+|.+| |+++++.+.|+++.+....
T Consensus 294 ----~---~~~~~~~~-~~~~---~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~~~~ 343 (365)
T 3e7e_A 294 ----K---PEGLFRRL-PHLD---MWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQHYT 343 (365)
T ss_dssp ----E---ECSCCTTC-SSHH---HHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHHHTT
T ss_pred ----e---echhcccc-CcHH---HHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHHhhh
Confidence 0 00111111 1123 34456669999999998 6789999999988876543
No 122
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=4.1e-38 Score=326.25 Aligned_cols=248 Identities=27% Similarity=0.435 Sum_probs=188.5
Q ss_pred hccccccCeEEEEEEEEcCCceEEEEEeeccccC---hhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccCC
Q 005693 390 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 466 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g 466 (682)
.+.||+|+||+||+|+.. ..+|+|+++..... .+.+.+|++++.++ +|+||+++++++ .....++||||++++
T Consensus 29 ~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~-~~~~~~lv~e~~~~~ 104 (289)
T 3og7_A 29 GQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT-RHVNILLFMGYS-TAPQLAIVTQWCEGS 104 (289)
T ss_dssp EEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEE-CSSSCEEEEECCCEE
T ss_pred eeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhC-CCCcEEEEEeec-cCCccEEEEEecCCC
Confidence 478999999999999864 35999998755433 35688999999998 899999999965 566789999999999
Q ss_pred chhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCC----
Q 005693 467 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP---- 542 (682)
Q Consensus 467 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~---- 542 (682)
+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 105 ~L~~~l~~~~----~~~~~~~~~~i~~qi~~~L~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 177 (289)
T 3og7_A 105 SLYHHLHASE----TKFEMKKLIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSH 177 (289)
T ss_dssp EHHHHHTTC-------CCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTTEEEECCCC------------
T ss_pred cHHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHHhCC---cccccCccceEEECCCCCEEEccceeccccccccccc
Confidence 9999996432 34899999999999999999999998 999999999999999999999999998765421
Q ss_pred --CCCCCCCcccCccccc---cCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhh
Q 005693 543 --ATPSRSAGYRAPEVIE---TRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVEL 617 (682)
Q Consensus 543 --~~~~~~~~y~aPE~~~---~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 617 (682)
....+++.|+|||++. +..++.++||||||+++|||++|+.||......+ ............. ..
T Consensus 178 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~------~~~~~~~~~~~~~----~~ 247 (289)
T 3og7_A 178 QFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD------QIIEMVGRGSLSP----DL 247 (289)
T ss_dssp ------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHH------HHHHHHHHTSCCC----CT
T ss_pred cccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHH------HHHHHhcccccCc----ch
Confidence 1235788999999986 5668889999999999999999999997543211 1111111111110 00
Q ss_pred ccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhh
Q 005693 618 MRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQ 660 (682)
Q Consensus 618 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~ 660 (682)
.. ........+.+++.+||+.+|++|||++|+++.|+++.+
T Consensus 248 ~~--~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 248 SK--VRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp TS--SCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred hh--ccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 00 011233567788889999999999999999999998864
No 123
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=2.9e-38 Score=331.14 Aligned_cols=255 Identities=27% Similarity=0.375 Sum_probs=202.4
Q ss_pred hccccccCeEEEEEEEEc------CCceEEEEEeecccc--ChhhHHHHHHHHHHhcCCCceeceEEEEEecC-ceEEEE
Q 005693 390 AEVLGKGSYGTAYKAVLE------ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKD-EKLLVY 460 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~-~~~lV~ 460 (682)
.+.||+|+||.||+|... +++.||+|+++.... ..+.+.+|++++.++.+||||+++++++...+ ..++||
T Consensus 32 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~~lv~ 111 (316)
T 2xir_A 32 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 111 (316)
T ss_dssp EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEEE
T ss_pred eeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCCceEEEE
Confidence 578999999999999852 357899999976433 23468899999999988999999999988755 489999
Q ss_pred eeccCCchhHhhccCCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeE
Q 005693 461 DYFASGSLSTLLHGNRGA-----------GRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGC 529 (682)
Q Consensus 461 e~~~~g~L~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~k 529 (682)
||+++|+|.+++...... ....+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+|
T Consensus 112 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dikp~Nil~~~~~~~k 188 (316)
T 2xir_A 112 EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVK 188 (316)
T ss_dssp ECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEE
T ss_pred EcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCC---cccccCccceEEECCCCCEE
Confidence 999999999999764321 0223789999999999999999999998 99999999999999999999
Q ss_pred EeecCCCCCCCCCCC------CCCCCcccCccccccCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHH
Q 005693 530 ISDFGLTPLMNVPAT------PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQS 602 (682)
Q Consensus 530 l~DfGla~~~~~~~~------~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-g~~Pf~~~~~~~~~~l~~~~~~ 602 (682)
|+|||+++....... ..+++.|+|||++.+..++.++||||||+++|||+| |..||.+....+ ....
T Consensus 189 l~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~------~~~~ 262 (316)
T 2xir_A 189 ICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE------EFCR 262 (316)
T ss_dssp ECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSH------HHHH
T ss_pred ECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhH------HHHH
Confidence 999999986644322 235678999999999999999999999999999998 999997644221 1111
Q ss_pred HhhhccccccchhhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCC
Q 005693 603 VVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 663 (682)
Q Consensus 603 ~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~~~ 663 (682)
.......... . ......+.+++.+||+.||++|||++|++++|+.+.+...
T Consensus 263 ~~~~~~~~~~-------~---~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 313 (316)
T 2xir_A 263 RLKEGTRMRA-------P---DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 313 (316)
T ss_dssp HHHHTCCCCC-------C---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred HhccCccCCC-------C---CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhc
Confidence 1111111000 0 1123356778889999999999999999999999987654
No 124
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=3.5e-38 Score=327.98 Aligned_cols=250 Identities=25% Similarity=0.402 Sum_probs=195.5
Q ss_pred hccccccCeEEEEEEEEcCC----ceEEEEEeecccc--ChhhHHHHHHHHHHhcCCCceeceEEEEE-ecCceEEEEee
Q 005693 390 AEVLGKGSYGTAYKAVLEES----TTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYY-SKDEKLLVYDY 462 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~~----~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~-~~~~~~lV~e~ 462 (682)
.+.||+|+||+||+|...++ ..+|+|.+..... ..+.+.+|+++++++ +||||+++++++. .++..++||||
T Consensus 30 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~v~e~ 108 (298)
T 3f66_A 30 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF-SHPNVLSLLGICLRSEGSPLVVLPY 108 (298)
T ss_dssp EEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTC-CCTTBCCCCEEECCSSSCCEEEEEC
T ss_pred cceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhC-CCCCEeeeeeEEEcCCCceEEEEeC
Confidence 47899999999999986432 2578888865332 235688999999999 8999999999865 45578999999
Q ss_pred ccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCC
Q 005693 463 FASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP 542 (682)
Q Consensus 463 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~ 542 (682)
+++|+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++.....
T Consensus 109 ~~~~~L~~~l~~~~----~~~~~~~~~~i~~ql~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 181 (298)
T 3f66_A 109 MKHGDLRNFIRNET----HNPTVKDLIGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 181 (298)
T ss_dssp CTTCBHHHHHHCTT----CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECSCGGGCCCSCG
T ss_pred CCCCCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEECCCCCEEECccccccccccc
Confidence 99999999997532 34889999999999999999999998 999999999999999999999999999765432
Q ss_pred --------CCCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccc
Q 005693 543 --------ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 613 (682)
Q Consensus 543 --------~~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-g~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 613 (682)
....+++.|+|||.+.+..++.++||||||+++|||++ |.+||......+ .. ......... .
T Consensus 182 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~---~~---~~~~~~~~~---~ 252 (298)
T 3f66_A 182 EYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD---IT---VYLLQGRRL---L 252 (298)
T ss_dssp GGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTT---HH---HHHHTTCCC---C
T ss_pred chhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHH---HH---HHHhcCCCC---C
Confidence 12335678999999999999999999999999999999 556665443222 11 111111100 0
Q ss_pred hhhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCCC
Q 005693 614 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSE 664 (682)
Q Consensus 614 d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~~~~ 664 (682)
.. ......+.+++.+||+.||++|||++|+++.|+++......
T Consensus 253 -----~~---~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~~ 295 (298)
T 3f66_A 253 -----QP---EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 295 (298)
T ss_dssp -----CC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSCC
T ss_pred -----CC---ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhcc
Confidence 01 11223567788899999999999999999999999876554
No 125
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.5e-38 Score=343.88 Aligned_cols=190 Identities=26% Similarity=0.433 Sum_probs=154.9
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeeccccC---hhhHHHHHHHHHHhcCCCceeceEEEEEecC--ceEEEEeec
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKD--EKLLVYDYF 463 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~--~~~lV~e~~ 463 (682)
.+.||+|+||.||+|... +++.||+|++...... .+.+.+|+.++..+.+||||+++++++..++ ..++||||+
T Consensus 14 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv~e~~ 93 (388)
T 3oz6_A 14 VKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYM 93 (388)
T ss_dssp EEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEEEECC
T ss_pred EEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEEeccc
Confidence 468999999999999975 5788999998654332 3457789999999966999999999998654 689999999
Q ss_pred cCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCC--
Q 005693 464 ASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV-- 541 (682)
Q Consensus 464 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~-- 541 (682)
+ |+|.+++... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 94 ~-~~L~~~~~~~------~~~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 163 (388)
T 3oz6_A 94 E-TDLHAVIRAN------ILEPVHKQYVVYQLIKVIKYLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIR 163 (388)
T ss_dssp S-EEHHHHHHHT------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEESSSCC
T ss_pred C-cCHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHeEEcCCCCEEecCCcccccccccc
Confidence 7 5999999742 3899999999999999999999998 99999999999999999999999999975432
Q ss_pred -----------------------CCCCCCCCcccCcccccc-CCCCCcchHHHHHHHHHHHHhCCCCCCCCC
Q 005693 542 -----------------------PATPSRSAGYRAPEVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPT 589 (682)
Q Consensus 542 -----------------------~~~~~~~~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~ 589 (682)
.....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||.+..
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~ 235 (388)
T 3oz6_A 164 RVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSS 235 (388)
T ss_dssp CCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred cccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 112357889999999976 678999999999999999999999998654
No 126
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=7.9e-38 Score=324.51 Aligned_cols=251 Identities=22% Similarity=0.334 Sum_probs=190.1
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeeccccC---hhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccC
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 465 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~ 465 (682)
.+.||+|+||+||+|... +++.||+|++...... .+.+.+|++++.++ +||||+++++++.+++..++||||+++
T Consensus 7 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~ 85 (292)
T 3o0g_A 7 LEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKEL-KHKNIVRLHDVLHSDKKLTLVFEFCDQ 85 (292)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred eeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcC-CCCCEeeEEeEEEeCCEEEEEEecCCC
Confidence 468999999999999976 4788999999755432 35678899999999 899999999999999999999999986
Q ss_pred CchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCC---
Q 005693 466 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP--- 542 (682)
Q Consensus 466 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~--- 542 (682)
++.+.+.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 86 -~l~~~~~~~~----~~l~~~~~~~~~~ql~~~l~~lH~~~---ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 157 (292)
T 3o0g_A 86 -DLKKYFDSCN----GDLDPEIVKSFLFQLLKGLGFCHSRN---VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRC 157 (292)
T ss_dssp -EHHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSC
T ss_pred -CHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecccceecCCcccc
Confidence 6666554322 34899999999999999999999998 999999999999999999999999999765432
Q ss_pred -CCCCCCCcccCccccccCC-CCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhh-------cccc--c
Q 005693 543 -ATPSRSAGYRAPEVIETRK-HSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVRE-------EWTA--E 611 (682)
Q Consensus 543 -~~~~~~~~y~aPE~~~~~~-~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~-------~~~~--~ 611 (682)
....+|+.|+|||++.+.. ++.++|||||||++|||++|..||..... .......+... .|.. .
T Consensus 158 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~-----~~~~~~~i~~~~~~~~~~~~~~~~~ 232 (292)
T 3o0g_A 158 YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGND-----VDDQLKRIFRLLGTPTEEQWPSMTK 232 (292)
T ss_dssp CCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSS-----HHHHHHHHHHHHCCCCTTTCTTGGG
T ss_pred ccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCC-----HHHHHHHHHHHhCCCChhhhhhhcc
Confidence 2345788999999997766 79999999999999999999888643221 11111111110 0000 0
Q ss_pred cch--------hhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 612 VFD--------VELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 612 ~~d--------~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
..+ ...............+.+++.+|++.||++|||++|++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 283 (292)
T 3o0g_A 233 LPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp STTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred cccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 000 0000000111223456678889999999999999999873
No 127
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=7.2e-38 Score=339.42 Aligned_cols=265 Identities=16% Similarity=0.248 Sum_probs=206.8
Q ss_pred hccccccCeEEEEEEEEcC-CceEEEEEeeccc--cChhhHHHHHHHHHHhcCCCceeceEEEEEecC--ceEEEEeecc
Q 005693 390 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVV--VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKD--EKLLVYDYFA 464 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~--~~~lV~e~~~ 464 (682)
.+.||+|+||+||+|.... ++.||+|+++... ...+.+.+|++++.++ +||||+++++++...+ ..++||||++
T Consensus 14 ~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~~~lv~e~~~ 92 (396)
T 4eut_A 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKL-NHKNIVKLFAIEEETTTRHKVLIMEFCP 92 (396)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHC-CCTTBCCEEEEEECTTTCCEEEEECCCT
T ss_pred EEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhc-CCCCCCeEEEeeccCCCCeeEEEEecCC
Confidence 4689999999999999865 7889999997543 2356788999999999 8999999999998765 6799999999
Q ss_pred CCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEe----cCCCCeEEeecCCCCCCC
Q 005693 465 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLI----NQDLDGCISDFGLTPLMN 540 (682)
Q Consensus 465 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl----~~~~~~kl~DfGla~~~~ 540 (682)
+|+|.+++..... ...+++..++.++.|++.||+|||+.+ |+||||||+|||+ +.++.+||+|||+++...
T Consensus 93 ~g~L~~~l~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~ 167 (396)
T 4eut_A 93 CGSLYTVLEEPSN--AYGLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE 167 (396)
T ss_dssp TEEHHHHTTSGGG--TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEECTTSCEEEEECCGGGCEECC
T ss_pred CCCHHHHHHhhhc--ccCCCHHHHHHHHHHHHHHHHHHHHCC---EEECCcCHHHEEEeecCCCceeEEEecCCCceEcc
Confidence 9999999975432 233899999999999999999999998 9999999999999 778889999999997765
Q ss_pred CCC---CCCCCCcccCcccccc--------CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccc
Q 005693 541 VPA---TPSRSAGYRAPEVIET--------RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWT 609 (682)
Q Consensus 541 ~~~---~~~~~~~y~aPE~~~~--------~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~ 609 (682)
... ...+++.|+|||++.+ ..++.++|||||||++|||++|+.||........ ..............
T Consensus 168 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~--~~~~~~~~~~~~p~ 245 (396)
T 4eut_A 168 DDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRR--NKEVMYKIITGKPS 245 (396)
T ss_dssp CGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTT--CHHHHHHHHHSCCT
T ss_pred CCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccc--hHHHHHHHhcCCCc
Confidence 432 3457899999999865 5678899999999999999999999975432221 12222222222111
Q ss_pred ccc------------chhhhc-cccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcC
Q 005693 610 AEV------------FDVELM-RFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 662 (682)
Q Consensus 610 ~~~------------~d~~l~-~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~~ 662 (682)
... +..... ...........+.+++.+||+.||++||+++|+++.++++....
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~~ 311 (396)
T 4eut_A 246 GAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHRM 311 (396)
T ss_dssp TCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTCE
T ss_pred ccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhce
Confidence 000 000011 11122456667788999999999999999999999999987653
No 128
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=335.92 Aligned_cols=279 Identities=18% Similarity=0.300 Sum_probs=199.3
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeeccccC--hhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccCC
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG--KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 466 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~--~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g 466 (682)
.+.||+|+||+||+|... +++.||+|++...... ...+.+|++++.++ +||||+++++++..++..++||||++ |
T Consensus 7 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~-~ 84 (324)
T 3mtl_A 7 LDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDL-KHANIVTLHDIIHTEKSLTLVFEYLD-K 84 (324)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCC-CCTTBCCEEEEEECSSCEEEEEECCS-E
T ss_pred EEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhc-CCCCCCeeeeEEeeCCEEEEEecccc-c
Confidence 468999999999999976 5788999998654322 22456789999998 89999999999999999999999997 5
Q ss_pred chhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCCC---
Q 005693 467 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA--- 543 (682)
Q Consensus 467 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~--- 543 (682)
+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 85 ~l~~~~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~ 157 (324)
T 3mtl_A 85 DLKQYLDDCG----NIINMHNVKLFLFQLLRGLAYCHRQK---VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTY 157 (324)
T ss_dssp EHHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHHTT---EEESSCCGGGEEECTTCCEEECSSSEEECC-------
T ss_pred CHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCcCHHHEEECCCCCEEEccCcccccccCCcccc
Confidence 9999887542 34899999999999999999999998 9999999999999999999999999987654332
Q ss_pred -CCCCCCcccCcccccc-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhh----hccccccchhhh
Q 005693 544 -TPSRSAGYRAPEVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVR----EEWTAEVFDVEL 617 (682)
Q Consensus 544 -~~~~~~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~----~~~~~~~~d~~l 617 (682)
...+++.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+. ......... +.+.........
T Consensus 158 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~ 234 (324)
T 3mtl_A 158 DNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQ---LHFIFRILGTPTEETWPGILSNEEF 234 (324)
T ss_dssp -----CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHHHHHHHCCCCTTTSTTGGGCHHH
T ss_pred ccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHhCCCChHhchhhhcchhh
Confidence 2356889999999876 5689999999999999999999999986542221 111111111 000000000000
Q ss_pred c-----c--ccC----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHHHhhhcCCCCCCCCcccCCCCCCCC
Q 005693 618 M-----R--FQN----IEEEMVQMLQIGMACVAKVPDMRPNMDEVVR--MIEEVRQSDSENRPSSEENKSKDSNVQ 680 (682)
Q Consensus 618 ~-----~--~~~----~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~--~L~~i~~~~~~~~~~~~~~~~~~~~~~ 680 (682)
. . ... .......+.+++.+|++.||++|||++|+++ .+..+.+..............++.+.|
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~~~~~~~~~~~~~~~~~~~q 310 (324)
T 3mtl_A 235 KTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGERIHKLPDTTSIFALKEIQLQ 310 (324)
T ss_dssp HHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCSTTSSSCTTSCGGGSTTCCCC
T ss_pred cccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhcccccccCCCCCcHhHHHHHHhh
Confidence 0 0 000 0112235667888999999999999999998 555555444433333333333444444
No 129
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=1.4e-37 Score=336.36 Aligned_cols=241 Identities=20% Similarity=0.306 Sum_probs=190.6
Q ss_pred hccccccCeEEEEEEEEcCCceEEEEEeeccccC---hhhHHHHHHHHHHhcC-CCceeceEEEEEecCceEEEEeeccC
Q 005693 390 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQ-HPNVVPLRAYYYSKDEKLLVYDYFAS 465 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~-h~niv~l~~~~~~~~~~~lV~e~~~~ 465 (682)
.+.||+|+||.||++...+++.||||++...... .+.+.+|++++.++.+ |+||+++++++..++..++||| +.+
T Consensus 61 ~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E-~~~ 139 (390)
T 2zmd_A 61 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGN 139 (390)
T ss_dssp EEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE-CCS
T ss_pred EEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe-cCC
Confidence 4789999999999999888899999999765433 3568899999999954 7999999999999999999999 568
Q ss_pred CchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCC---
Q 005693 466 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP--- 542 (682)
Q Consensus 466 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~--- 542 (682)
|+|.+++.... .+++.++..++.||+.||+|||+.+ |+||||||+|||++ ++.+||+|||+++.....
T Consensus 140 ~~L~~~l~~~~-----~~~~~~~~~i~~qi~~aL~~lH~~~---ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~ 210 (390)
T 2zmd_A 140 IDLNSWLKKKK-----SIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS 210 (390)
T ss_dssp EEHHHHHHHCS-----SCCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCCGGGEEES-SSCEEECCCSSSCCC------
T ss_pred CCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHEEEE-CCeEEEEecCccccccCCCcc
Confidence 89999997532 4889999999999999999999998 99999999999995 589999999999876432
Q ss_pred ---CCCCCCCcccCcccccc-----------CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcc
Q 005693 543 ---ATPSRSAGYRAPEVIET-----------RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEW 608 (682)
Q Consensus 543 ---~~~~~~~~y~aPE~~~~-----------~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~ 608 (682)
....||+.|+|||++.+ ..++.++|||||||++|||++|+.||.... +.............
T Consensus 211 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~-----~~~~~~~~~~~~~~ 285 (390)
T 2zmd_A 211 VVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII-----NQISKLHAIIDPNH 285 (390)
T ss_dssp ---CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCC-----CHHHHHHHHHCTTS
T ss_pred ccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhh-----HHHHHHHHHhCccc
Confidence 23458999999999865 368899999999999999999999997432 11122222221111
Q ss_pred ccccchhhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 005693 609 TAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMI 655 (682)
Q Consensus 609 ~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L 655 (682)
... ..... ...+.+++.+||+.||++|||++|++++-
T Consensus 286 ~~~-------~~~~~---~~~~~~li~~~L~~dP~~Rps~~ell~hp 322 (390)
T 2zmd_A 286 EIE-------FPDIP---EKDLQDVLKCCLKRDPKQRISIPELLAHP 322 (390)
T ss_dssp CCC-------CCCCS---CHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred cCC-------CCccc---hHHHHHHHHHHcccChhhCCCHHHHhhCc
Confidence 100 00111 23566788899999999999999999753
No 130
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=5.6e-38 Score=338.47 Aligned_cols=243 Identities=21% Similarity=0.373 Sum_probs=196.3
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeecccc-ChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccCCc
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV-GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGS 467 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~ 467 (682)
.+.||+|+||.||+|... +++.+|+|++..... ....+.+|++++..+ +||||+++++++.+.+..++||||+++|+
T Consensus 56 ~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~lv~E~~~gg~ 134 (387)
T 1kob_A 56 LEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQL-HHPKLINLHDAFEDKYEMVLILEFLSGGE 134 (387)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTC-CSTTBCCEEEEEECSSEEEEEEECCCCCB
T ss_pred EEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhC-CCcCCCeEEEEEEeCCEEEEEEEcCCCCc
Confidence 468999999999999976 477899999875432 345788999999999 89999999999999999999999999999
Q ss_pred hhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecC--CCCeEEeecCCCCCCCCCC--
Q 005693 468 LSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQ--DLDGCISDFGLTPLMNVPA-- 543 (682)
Q Consensus 468 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~--~~~~kl~DfGla~~~~~~~-- 543 (682)
|.+++... ...+++..+..++.||+.||+|||+.+ |+||||||+|||++. ++.+||+|||+++......
T Consensus 135 L~~~l~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~ 207 (387)
T 1kob_A 135 LFDRIAAE----DYKMSEAEVINYMRQACEGLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIV 207 (387)
T ss_dssp HHHHTTCT----TCCBCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCE
T ss_pred HHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccchHHeEEecCCCCceEEEecccceecCCCcce
Confidence 99999743 234899999999999999999999998 999999999999974 4779999999998765432
Q ss_pred -CCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhccccC
Q 005693 544 -TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQN 622 (682)
Q Consensus 544 -~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~ 622 (682)
...+|+.|+|||++.+..++.++|||||||++|||++|+.||.+... ......+....+.. +. ..
T Consensus 208 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~------~~~~~~i~~~~~~~---~~-----~~ 273 (387)
T 1kob_A 208 KVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD------LETLQNVKRCDWEF---DE-----DA 273 (387)
T ss_dssp EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH------HHHHHHHHHCCCCC---CS-----ST
T ss_pred eeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCH------HHHHHHHHhCCCCC---Cc-----cc
Confidence 23578999999999999999999999999999999999999975431 11222222211110 00 00
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 623 IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 623 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
.......+.+++.+||+.||++|||++|++++
T Consensus 274 ~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 274 FSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred cccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 11223456677789999999999999999885
No 131
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=2.9e-38 Score=325.81 Aligned_cols=244 Identities=22% Similarity=0.384 Sum_probs=196.5
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeeccccChhhHHHHHHHHHHhcCCCceeceEEEEEe----------------
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYS---------------- 452 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~---------------- 452 (682)
.+.||+|+||.||+|... +++.||+|+++.. .+.+.+|++++.++ +||||+++++++..
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (284)
T 2a19_B 16 IELIGSGGFGQVFKAKHRIDGKTYVIKRVKYN---NEKAEREVKALAKL-DHVNIVHYNGCWDGFDYDPETSSKNSSRSK 91 (284)
T ss_dssp EEEEECSSSCCEEEEEETTTCCEEEEEEEECC---SGGGHHHHHHHHHC-CCTTBCCEEEEEEEEEEC---------CCE
T ss_pred eeeeccCCceEEEEEEEcCCCeEEEEEEeccc---cHHHHHHHHHHHhC-CCCCEEEEeeeEeccccCcccccccccccC
Confidence 578999999999999986 6889999998753 35678899999999 89999999999864
Q ss_pred cCceEEEEeeccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEee
Q 005693 453 KDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISD 532 (682)
Q Consensus 453 ~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~D 532 (682)
....++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|
T Consensus 92 ~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~D 165 (284)
T 2a19_B 92 TKCLFIQMEFCDKGTLEQWIEKRR---GEKLDKVLALELFEQITKGVDYIHSKK---LINRDLKPSNIFLVDTKQVKIGD 165 (284)
T ss_dssp EEEEEEEECCCCSCBHHHHHHHGG---GSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECC
T ss_pred cceEEEEEeccCCCCHHHHHhhcc---CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCCHHHEEEcCCCCEEECc
Confidence 345789999999999999997532 234899999999999999999999998 99999999999999999999999
Q ss_pred cCCCCCCCCC---CCCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccc
Q 005693 533 FGLTPLMNVP---ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWT 609 (682)
Q Consensus 533 fGla~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~ 609 (682)
||++...... ....+++.|+|||++.+..++.++||||||+++|||++|..|+... ....... .....
T Consensus 166 fg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~--------~~~~~~~-~~~~~ 236 (284)
T 2a19_B 166 FGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET--------SKFFTDL-RDGII 236 (284)
T ss_dssp CTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH--------HHHHHHH-HTTCC
T ss_pred chhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH--------HHHHHHh-hcccc
Confidence 9998765443 2345788999999999999999999999999999999999887421 1111111 11111
Q ss_pred cccchhhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCCCC
Q 005693 610 AEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSEN 665 (682)
Q Consensus 610 ~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~~~~~ 665 (682)
. .. ....+.+++.+||+.||++|||++|++++|+.+......+
T Consensus 237 ~----------~~---~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~~~ 279 (284)
T 2a19_B 237 S----------DI---FDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPEKN 279 (284)
T ss_dssp C----------TT---SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC-----
T ss_pred c----------cc---CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCCcc
Confidence 1 11 1234567788999999999999999999999998765543
No 132
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.8e-38 Score=335.02 Aligned_cols=246 Identities=22% Similarity=0.368 Sum_probs=192.1
Q ss_pred hccccccCeEEEEEEEEcC-Cce----EEEEEeeccc--cChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEee
Q 005693 390 AEVLGKGSYGTAYKAVLEE-STT----VVVKRLKEVV--VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDY 462 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~-~~~----vavK~l~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~ 462 (682)
.+.||+|+||.||+|.... ++. |++|.+.... ...+.+.+|+.++.++ +||||+++++++..+ ..++|+||
T Consensus 20 ~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~-~~~~v~~~ 97 (327)
T 3lzb_A 20 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-DNPHVCRLLGICLTS-TVQLITQL 97 (327)
T ss_dssp EEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTC-CBTTBCCCCEEEESS-SEEEEECC
T ss_pred EEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhC-CCCCeeEEEEEEecC-CceEEEEe
Confidence 4789999999999999653 343 5777765432 2456789999999999 899999999999865 47899999
Q ss_pred ccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCC
Q 005693 463 FASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP 542 (682)
Q Consensus 463 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~ 542 (682)
+.+|+|.+++.... ..+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 98 ~~~g~L~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~ 170 (327)
T 3lzb_A 98 MPFGCLLDYVREHK----DNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170 (327)
T ss_dssp CSSCBHHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCTTC-------
T ss_pred cCCCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHhhCC---CcCCCCCHHHEEEcCCCCEEEccCcceeEccCc
Confidence 99999999997543 34899999999999999999999998 999999999999999999999999999876433
Q ss_pred C------CCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchh
Q 005693 543 A------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDV 615 (682)
Q Consensus 543 ~------~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-g~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 615 (682)
. ...+++.|+|||++.+..++.++|||||||++|||++ |+.||.+....+. . .........
T Consensus 171 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~---~----~~~~~~~~~----- 238 (327)
T 3lzb_A 171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI---S----SILEKGERL----- 238 (327)
T ss_dssp ---------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH---H----HHHHTTCCC-----
T ss_pred cccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH---H----HHHHcCCCC-----
Confidence 2 1234667999999999999999999999999999999 9999986543321 1 111111100
Q ss_pred hhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 005693 616 ELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQS 661 (682)
Q Consensus 616 ~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~ 661 (682)
.........+.+++.+||+.||++||+++|+++.|+++.+.
T Consensus 239 -----~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 239 -----PQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp -----CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred -----CCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 01112233567788899999999999999999999998743
No 133
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=7.2e-38 Score=350.71 Aligned_cols=244 Identities=23% Similarity=0.284 Sum_probs=198.0
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeeccc----cChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeecc
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 464 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~ 464 (682)
.+.||+|+||.||+|+.. +++.||+|++.... .....+.+|++++..+ +||||+++++++.+.+..++||||++
T Consensus 189 ~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l-~hp~Iv~l~~~~~~~~~l~lVmEy~~ 267 (576)
T 2acx_A 189 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV-NSRFVVSLAYAYETKDALCLVLTLMN 267 (576)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHc-CCCCEeeEEEEEeeCCEEEEEEEcCC
Confidence 468999999999999976 57899999997542 2345688899999999 99999999999999999999999999
Q ss_pred CCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCCC-
Q 005693 465 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA- 543 (682)
Q Consensus 465 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~- 543 (682)
+|+|.+++.... ...+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 268 gg~L~~~l~~~~---~~~l~e~~~~~i~~qIl~aL~yLH~~g---IvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~~ 341 (576)
T 2acx_A 268 GGDLKFHIYHMG---QAGFPEARAVFYAAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT 341 (576)
T ss_dssp SCBHHHHHHSSS---SCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTTCEECCTTCC
T ss_pred CCcHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHHCC---EeccCCchheEEEeCCCCeEEEecccceecccCcc
Confidence 999999997543 234899999999999999999999998 9999999999999999999999999998765432
Q ss_pred --CCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhcccc
Q 005693 544 --TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQ 621 (682)
Q Consensus 544 --~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 621 (682)
...||+.|+|||++.+..++.++|||||||++|||++|+.||....... ........ +..... . ...
T Consensus 342 ~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~--~~~~i~~~-i~~~~~-~-------~p~ 410 (576)
T 2acx_A 342 IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI--KREEVERL-VKEVPE-E-------YSE 410 (576)
T ss_dssp EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCC--CHHHHHHH-HHHCCC-C-------CCT
T ss_pred ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccch--hHHHHHHH-hhcccc-c-------CCc
Confidence 3568999999999999899999999999999999999999998654322 11111111 111100 0 011
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 005693 622 NIEEEMVQMLQIGMACVAKVPDMRP-----NMDEVVRM 654 (682)
Q Consensus 622 ~~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~evl~~ 654 (682)
. ....+.+++.+||+.||++|| +++|++++
T Consensus 411 ~---~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 411 R---FSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp T---SCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred c---CCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 1 223556777799999999999 78999874
No 134
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.7e-38 Score=330.93 Aligned_cols=256 Identities=21% Similarity=0.325 Sum_probs=191.8
Q ss_pred hccccccCeEEEEEEEEcC-CceEEEEEeeccccC---hhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccC
Q 005693 390 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 465 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~ 465 (682)
.+.||+|+||+||+|.... ++.||+|++...... .+.+.+|++++.++ +||||+++++++...+..++||||+++
T Consensus 8 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~ 86 (311)
T 4agu_A 8 IGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQL-KHPNLVNLLEVFRRKRRLHLVFEYCDH 86 (311)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred eeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhC-CCCCccchhheeecCCeEEEEEEeCCC
Confidence 4689999999999999864 788999998665433 34577899999999 899999999999999999999999999
Q ss_pred CchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCCC--
Q 005693 466 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA-- 543 (682)
Q Consensus 466 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~-- 543 (682)
++|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 87 ~~l~~~~~~~-----~~~~~~~~~~i~~~l~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 158 (311)
T 4agu_A 87 TVLHELDRYQ-----RGVPEHLVKSITWQTLQAVNFCHKHN---CIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDY 158 (311)
T ss_dssp EHHHHHHHTS-----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred chHHHHHhhh-----cCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCChhhEEEcCCCCEEEeeCCCchhccCcccc
Confidence 9999988643 24899999999999999999999998 9999999999999999999999999997665332
Q ss_pred --CCCCCCcccCcccccc-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCCh---------hHHHHHHhhhccccc
Q 005693 544 --TPSRSAGYRAPEVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDL---------PRWVQSVVREEWTAE 611 (682)
Q Consensus 544 --~~~~~~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l---------~~~~~~~~~~~~~~~ 611 (682)
...+++.|+|||++.+ ..++.++||||||+++|||++|+.||.+....+.... ..+........+...
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (311)
T 4agu_A 159 YDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSG 238 (311)
T ss_dssp -------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTT
T ss_pred cCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccccccccccccccccccc
Confidence 3357888999999976 5679999999999999999999999976543221100 000000000000000
Q ss_pred cchhhhccccC----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 612 VFDVELMRFQN----IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 612 ~~d~~l~~~~~----~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
...+....... .......+.+++.+||+.||++|||++|++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 239 VKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp CCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred CcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 00000000000 01223456788889999999999999999974
No 135
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=4.4e-38 Score=329.64 Aligned_cols=253 Identities=21% Similarity=0.333 Sum_probs=191.5
Q ss_pred hccccccCeEEEEEEEE-cCCceEEEEEeeccccC----hhhHHHHHHHHHHhcCCCceeceEEEEEecCce----EEEE
Q 005693 390 AEVLGKGSYGTAYKAVL-EESTTVVVKRLKEVVVG----KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEK----LLVY 460 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~----~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~----~lV~ 460 (682)
.+.||+|+||.||+|+. .+++.||+|+++..... ...+.+|++++.++ +||||+++++++...... ++||
T Consensus 17 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~~~~~lv~ 95 (311)
T 3ork_A 17 GEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL-NHPAIVAVYDTGEAETPAGPLPYIVM 95 (311)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCC-CCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcC-CCCCcceEEEeeeccCCCCcccEEEE
Confidence 47899999999999997 45788999999765332 23577888888888 899999999999876544 9999
Q ss_pred eeccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCC
Q 005693 461 DYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN 540 (682)
Q Consensus 461 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~ 540 (682)
||+++|+|.++++.. ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 96 e~~~g~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 167 (311)
T 3ork_A 96 EYVDGVTLRDIVHTE-----GPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIA 167 (311)
T ss_dssp ECCCEEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEETTSCEEECCCSCC----
T ss_pred ecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEcCCCCEEEeeccCccccc
Confidence 999999999999743 24899999999999999999999998 9999999999999999999999999997654
Q ss_pred CCC-------CCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccc
Q 005693 541 VPA-------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 613 (682)
Q Consensus 541 ~~~-------~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 613 (682)
... ...+++.|+|||++.+..++.++||||||+++|||++|+.||.+.... .............
T Consensus 168 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~------~~~~~~~~~~~~~--- 238 (311)
T 3ork_A 168 DSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV------SVAYQHVREDPIP--- 238 (311)
T ss_dssp --------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH------HHHHHHHHCCCCC---
T ss_pred ccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH------HHHHHHhcCCCCC---
Confidence 321 234789999999999999999999999999999999999999754321 1111212111110
Q ss_pred hhhhccccChHHHHHHHHHHHHHcccCCCCCCCCHH-HHHHHHHHhhhcCCCC
Q 005693 614 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMD-EVVRMIEEVRQSDSEN 665 (682)
Q Consensus 614 d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~-evl~~L~~i~~~~~~~ 665 (682)
.. ..... ....+.+++.+||+.||++||++. ++.+.+..+.......
T Consensus 239 -~~-~~~~~---~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~~~~~ 286 (311)
T 3ork_A 239 -PS-ARHEG---LSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPE 286 (311)
T ss_dssp -HH-HHSTT---CCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHTTCCCS
T ss_pred -cc-cccCC---CCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhcCCCCC
Confidence 00 00111 234566778899999999999655 4555666666554443
No 136
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=4.2e-38 Score=360.26 Aligned_cols=244 Identities=24% Similarity=0.347 Sum_probs=196.8
Q ss_pred ccccccCeEEEEEEEEc---CCceEEEEEeeccccC---hhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeecc
Q 005693 391 EVLGKGSYGTAYKAVLE---ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 464 (682)
Q Consensus 391 ~~lG~G~fg~Vy~~~~~---~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~ 464 (682)
+.||+|+||.||+|.+. .++.||||+++..... .+++.+|++++.++ +|||||++++++. .+..++||||++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~-~~~~~lv~E~~~ 452 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL-DNPYIVRMIGICE-AESWMLVMEMAE 452 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHC-CCTTBCCEEEEEE-SSSEEEEEECCT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEe-cCCEEEEEEccC
Confidence 57999999999999763 3568999999865432 46799999999999 8999999999986 456899999999
Q ss_pred CCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCCC-
Q 005693 465 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA- 543 (682)
Q Consensus 465 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~- 543 (682)
+|+|.+++... ..+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 453 ~g~L~~~l~~~-----~~l~~~~~~~i~~qi~~~L~yLH~~~---iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~ 524 (635)
T 4fl3_A 453 LGPLNKYLQQN-----RHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 524 (635)
T ss_dssp TEEHHHHHHHC-----TTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCTTHHHHTTC---
T ss_pred CCCHHHHHhhC-----CCCCHHHHHHHHHHHHHHHHHHHHCC---EeCCCCChHhEEEeCCCCEEEEEcCCccccccCcc
Confidence 99999999743 34899999999999999999999998 9999999999999999999999999997654322
Q ss_pred ------CCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchhh
Q 005693 544 ------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVE 616 (682)
Q Consensus 544 ------~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-g~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 616 (682)
...+++.|+|||++.+..++.++|||||||++|||++ |+.||.+....+ ....+.......
T Consensus 525 ~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~-------~~~~i~~~~~~~----- 592 (635)
T 4fl3_A 525 YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE-------VTAMLEKGERMG----- 592 (635)
T ss_dssp ----------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH-------HHHHHHTTCCCC-----
T ss_pred ccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH-------HHHHHHcCCCCC-----
Confidence 1234677999999999999999999999999999998 999997654221 111111111110
Q ss_pred hccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 005693 617 LMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQS 661 (682)
Q Consensus 617 l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~ 661 (682)
........+.+++.+||+.||++||+++++++.|+++...
T Consensus 593 -----~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~ 632 (635)
T 4fl3_A 593 -----CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYD 632 (635)
T ss_dssp -----CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred -----CCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHH
Confidence 1112335677888899999999999999999999988653
No 137
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=9.4e-39 Score=337.14 Aligned_cols=258 Identities=24% Similarity=0.363 Sum_probs=197.8
Q ss_pred hccccccCeEEEEEEEE-----cCCceEEEEEeecccc-ChhhHHHHHHHHHHhcCCCceeceEEEEEe--cCceEEEEe
Q 005693 390 AEVLGKGSYGTAYKAVL-----EESTTVVVKRLKEVVV-GKRDFEQQMEIVGRVGQHPNVVPLRAYYYS--KDEKLLVYD 461 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~-----~~~~~vavK~l~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~~--~~~~~lV~e 461 (682)
.+.||+|+||.||+|++ .+++.||+|++..... ..+.+.+|++++.++ +||||+++++++.. ....++|||
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~~lv~e 106 (327)
T 3lxl_A 28 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL-HSDFIVKYRGVSYGPGRQSLRLVME 106 (327)
T ss_dssp EEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSSCEEEEEEE
T ss_pred hhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhc-CCCceeEEEEEEecCCCceEEEEEe
Confidence 47899999999999985 3577899999876532 245689999999999 99999999999874 456889999
Q ss_pred eccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCC
Q 005693 462 YFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV 541 (682)
Q Consensus 462 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~ 541 (682)
|+++|+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.....
T Consensus 107 ~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~ 179 (327)
T 3lxl_A 107 YLPSGCLRDFLQRHR----ARLDASRLLLYSSQICKGMEYLGSRR---CVHRDLAARNILVESEAHVKIADFGLAKLLPL 179 (327)
T ss_dssp CCTTCBHHHHHHHHG----GGCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCGGGCEECCT
T ss_pred ecCCCCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChhhEEECCCCCEEEcccccceeccc
Confidence 999999999997532 24899999999999999999999998 99999999999999999999999999976543
Q ss_pred CC-------CCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCC--------CCCChhHHHHHHhhh
Q 005693 542 PA-------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRD--------DMVDLPRWVQSVVRE 606 (682)
Q Consensus 542 ~~-------~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~--------~~~~l~~~~~~~~~~ 606 (682)
.. ...+++.|+|||++.+..++.++||||||+++|||++|+.||...... ...............
T Consensus 180 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (327)
T 3lxl_A 180 DKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEE 259 (327)
T ss_dssp TCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHT
T ss_pred CCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhc
Confidence 22 234677799999999988999999999999999999999998643211 000000111111111
Q ss_pred ccccccchhhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCCCC
Q 005693 607 EWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSEN 665 (682)
Q Consensus 607 ~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~~~~~ 665 (682)
.. ...........+.+++.+||+.||++|||++|++++|+.+.......
T Consensus 260 ~~----------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~ 308 (327)
T 3lxl_A 260 GQ----------RLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRGC 308 (327)
T ss_dssp TC----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-------
T ss_pred cc----------CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhcCc
Confidence 10 01111223345777888999999999999999999999998665543
No 138
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=3.1e-38 Score=333.77 Aligned_cols=252 Identities=23% Similarity=0.374 Sum_probs=183.7
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeecccc-ChhhHHHHHHHHHHhcCCCceeceEEEEEe--------cCceEEE
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV-GKRDFEQQMEIVGRVGQHPNVVPLRAYYYS--------KDEKLLV 459 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~~--------~~~~~lV 459 (682)
.+.||+|+||.||+|+.. +++.||+|++..... ..+.+.+|+.++.++.+||||+++++++.. ....++|
T Consensus 33 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~~lv 112 (337)
T 3ll6_A 33 RRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLL 112 (337)
T ss_dssp EEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEEEEE
T ss_pred EEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCceEEEE
Confidence 478999999999999975 578899999865432 345688999999999669999999999953 2347899
Q ss_pred EeeccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCC
Q 005693 460 YDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM 539 (682)
Q Consensus 460 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~ 539 (682)
|||++ |+|.+++..... ...+++..+..++.|++.||+|||+.+ ++|+||||||+|||++.++.+||+|||+++..
T Consensus 113 ~e~~~-g~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~-~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~ 188 (337)
T 3ll6_A 113 TELCK-GQLVEFLKKMES--RGPLSCDTVLKIFYQTCRAVQHMHRQK-PPIIHRDLKVENLLLSNQGTIKLCDFGSATTI 188 (337)
T ss_dssp EECCS-EEHHHHHHHHHT--TCSCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCCCCCGGGCEECTTSCEEBCCCTTCBCC
T ss_pred EEecC-CCHHHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHhCC-CCEEEccCCcccEEECCCCCEEEecCccceec
Confidence 99996 799998864221 234899999999999999999999975 45999999999999999999999999999776
Q ss_pred CCCC----------------CCCCCCcccCcccc---ccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHH
Q 005693 540 NVPA----------------TPSRSAGYRAPEVI---ETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWV 600 (682)
Q Consensus 540 ~~~~----------------~~~~~~~y~aPE~~---~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~ 600 (682)
.... ...+++.|+|||++ .+..++.++||||||+++|||++|+.||.........
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~------ 262 (337)
T 3ll6_A 189 SHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIV------ 262 (337)
T ss_dssp SSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC---------------
T ss_pred cccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHhh------
Confidence 4322 23378889999998 5667889999999999999999999999754322110
Q ss_pred HHHhhhccccccchhhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCCCC
Q 005693 601 QSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSEN 665 (682)
Q Consensus 601 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~~~~~ 665 (682)
....... ... .....+.+++.+||+.||++|||++|++++|+++.+....+
T Consensus 263 ----~~~~~~~-------~~~---~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~~~~ 313 (337)
T 3ll6_A 263 ----NGKYSIP-------PHD---TQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARNVN 313 (337)
T ss_dssp -------CCCC-------TTC---CSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHTTCC
T ss_pred ----cCcccCC-------ccc---ccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccCCC
Confidence 0000000 000 11123567788999999999999999999999998766544
No 139
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=1.2e-37 Score=320.92 Aligned_cols=239 Identities=25% Similarity=0.374 Sum_probs=193.0
Q ss_pred hccccccCeEEEEEEEEcC-CceEEEEEeeccc----cChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeecc
Q 005693 390 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 464 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~ 464 (682)
.+.||+|+||.||+|.... +..||+|++.... .....+.+|++++.++ +||||+++++++.+.+..++||||++
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~ 92 (279)
T 3fdn_A 14 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLYGYFHDATRVYLILEYAP 92 (279)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred eeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcC-CCCCCcchhheEecCCEEEEEEecCC
Confidence 4789999999999999765 5689999986542 2345688899999998 89999999999999999999999999
Q ss_pred CCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCC--
Q 005693 465 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP-- 542 (682)
Q Consensus 465 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~-- 542 (682)
+|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 93 ~~~l~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~LH~~~---i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~~ 164 (279)
T 3fdn_A 93 LGTVYRELQKL-----SKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR 164 (279)
T ss_dssp TEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHTTT---CEECCCCGGGEEECTTSCEEECSCCEESCC-----
T ss_pred CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---EecccCChHhEEEcCCCCEEEEeccccccCCcccc
Confidence 99999999743 23899999999999999999999998 999999999999999999999999998665433
Q ss_pred CCCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhccccC
Q 005693 543 ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQN 622 (682)
Q Consensus 543 ~~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~ 622 (682)
....+++.|+|||.+.+..++.++||||||+++|||++|+.||...... ............ ..
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~~~~~~~~~~~---------~~-- 227 (279)
T 3fdn_A 165 TDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ------ETYKRISRVEFT---------FP-- 227 (279)
T ss_dssp ---CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHH------HHHHHHHHTCCC---------CC--
T ss_pred cccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHH------HHHHHHHhCCCC---------CC--
Confidence 2345788999999999999999999999999999999999999754311 111111111100 01
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 005693 623 IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMI 655 (682)
Q Consensus 623 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L 655 (682)
......+.+++.+||+.||++|||++|++++-
T Consensus 228 -~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~ 259 (279)
T 3fdn_A 228 -DFVTEGARDLISRLLKHNPSQRPMLREVLEHP 259 (279)
T ss_dssp -TTSCHHHHHHHHHHCCSSGGGSCCHHHHHHCH
T ss_pred -CcCCHHHHHHHHHHhccChhhCCCHHHHhhCc
Confidence 11223456778899999999999999999953
No 140
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=2.3e-37 Score=325.62 Aligned_cols=242 Identities=21% Similarity=0.343 Sum_probs=196.8
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeecccc-------ChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEe
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV-------GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYD 461 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-------~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e 461 (682)
.+.||+|+||.||+|... +++.||+|+++.... ..+.+.+|+.++.++ +||||+++++++.+.+..++|||
T Consensus 17 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e 95 (321)
T 2a2a_A 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQV-LHHNVITLHDVYENRTDVVLILE 95 (321)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEEC
T ss_pred eeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhC-CCCCcceEEEEEecCCEEEEEEE
Confidence 578999999999999976 478899999976432 246789999999999 89999999999999999999999
Q ss_pred eccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCC----CeEEeecCCCC
Q 005693 462 YFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDL----DGCISDFGLTP 537 (682)
Q Consensus 462 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~----~~kl~DfGla~ 537 (682)
|+++++|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||++++++ .+||+|||++.
T Consensus 96 ~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~lH~~~---ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~ 167 (321)
T 2a2a_A 96 LVSGGELFDFLAQK-----ESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167 (321)
T ss_dssp CCCSCBHHHHHHTC-----SCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTTSSSCCEEECCCTTCE
T ss_pred cCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCChHHEEEecCCCCcCCEEEccCccce
Confidence 99999999999743 34899999999999999999999998 99999999999999888 79999999997
Q ss_pred CCCCCC---CCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccch
Q 005693 538 LMNVPA---TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFD 614 (682)
Q Consensus 538 ~~~~~~---~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 614 (682)
...... ...+++.|+|||++.+..++.++||||||+++|||++|+.||.+.... .....+...... .+
T Consensus 168 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------~~~~~i~~~~~~---~~ 238 (321)
T 2a2a_A 168 EIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ------ETLANITSVSYD---FD 238 (321)
T ss_dssp ECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH------HHHHHHHTTCCC---CC
T ss_pred ecCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHH------HHHHHHHhcccc---cC
Confidence 665432 345788999999999999999999999999999999999999754321 111111111100 01
Q ss_pred hhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 615 VELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 615 ~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
... .. .....+.+++.+||+.||++|||++|++++
T Consensus 239 ~~~--~~---~~~~~~~~li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 239 EEF--FS---HTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp HHH--HT---TCCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred hhh--hc---ccCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 100 01 122346678889999999999999999873
No 141
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=1.2e-37 Score=328.70 Aligned_cols=245 Identities=17% Similarity=0.291 Sum_probs=196.0
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeecccc---ChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccC
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV---GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 465 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~ 465 (682)
.+.||+|+||.||+|... +++.||+|+++.... ....+.+|+.++..+.+||||+++++++.+.+..++||||+++
T Consensus 34 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e~~~~ 113 (327)
T 3lm5_A 34 SKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAG 113 (327)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred cceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEEecCC
Confidence 378999999999999976 478999999976533 3467889999999997889999999999999999999999999
Q ss_pred CchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecC---CCCeEEeecCCCCCCCCC
Q 005693 466 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQ---DLDGCISDFGLTPLMNVP 542 (682)
Q Consensus 466 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~---~~~~kl~DfGla~~~~~~ 542 (682)
|+|.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++. ++.+||+|||+++.....
T Consensus 114 ~~L~~~~~~~~---~~~~~~~~~~~i~~ql~~~L~~LH~~g---ivH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~ 187 (327)
T 3lm5_A 114 GEIFSLCLPEL---AEMVSENDVIRLIKQILEGVYYLHQNN---IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHA 187 (327)
T ss_dssp EEGGGGGSSCC----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESCBTTBCCEEECCGGGCEEC---
T ss_pred CcHHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCcCChHHEEEecCCCCCcEEEeeCccccccCCc
Confidence 99999986432 235899999999999999999999998 999999999999998 789999999999876543
Q ss_pred C---CCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhcc
Q 005693 543 A---TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMR 619 (682)
Q Consensus 543 ~---~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 619 (682)
. ...+++.|+|||++.+..++.++||||||+++|||++|+.||......+ ....+..... +..
T Consensus 188 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~------~~~~i~~~~~-----~~~--- 253 (327)
T 3lm5_A 188 CELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQE------TYLNISQVNV-----DYS--- 253 (327)
T ss_dssp ------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHTCC-----CCC---
T ss_pred cccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchH------HHHHHHhccc-----ccC---
Confidence 2 3458899999999999999999999999999999999999997543211 1111111100 000
Q ss_pred ccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 620 FQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 620 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
..........+.+++.+||+.||++|||++|++++
T Consensus 254 ~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 254 EETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp TTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred chhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 00111223456677889999999999999999885
No 142
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=2.9e-38 Score=325.87 Aligned_cols=247 Identities=23% Similarity=0.377 Sum_probs=196.3
Q ss_pred hccccccCeEEEEEEEEcCC----ceEEEEEeecccc--ChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeec
Q 005693 390 AEVLGKGSYGTAYKAVLEES----TTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYF 463 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~~----~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~ 463 (682)
.+.||+|+||.||+|...++ ..||+|.+..... ..+.+.+|++++.++ +||||+++++++.+ +..++||||+
T Consensus 17 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~-~~~~~v~e~~ 94 (281)
T 3cc6_A 17 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNL-DHPHIVKLIGIIEE-EPTWIIMELY 94 (281)
T ss_dssp EEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHH-CCTTBCCEEEEECS-SSCEEEEECC
T ss_pred EEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhC-CCCCcceEEEEEcC-CCCEEEEecC
Confidence 47899999999999986532 3599999876422 346788999999999 89999999999764 5678999999
Q ss_pred cCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCCC
Q 005693 464 ASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA 543 (682)
Q Consensus 464 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~ 543 (682)
++|+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 95 ~~~~L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 167 (281)
T 3cc6_A 95 PYGELGHYLERNK----NSLKVLTLVLYSLQICKAMAYLESIN---CVHRDIAVRNILVASPECVKLGDFGLSRYIEDED 167 (281)
T ss_dssp TTCBHHHHHHHHT----TTCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEEETTEEEECCCCGGGCC----
T ss_pred CCCCHHHHHHhcc----ccCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCccceEEECCCCcEEeCccCCCccccccc
Confidence 9999999997532 34899999999999999999999998 9999999999999999999999999997664432
Q ss_pred -----CCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhh
Q 005693 544 -----TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVEL 617 (682)
Q Consensus 544 -----~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-g~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 617 (682)
...+++.|+|||++.+..++.++||||||+++|||++ |+.||......+ .. ....... ...
T Consensus 168 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~---~~---~~~~~~~-~~~------ 234 (281)
T 3cc6_A 168 YYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD---VI---GVLEKGD-RLP------ 234 (281)
T ss_dssp -----CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGG---HH---HHHHHTC-CCC------
T ss_pred ccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHH---HH---HHHhcCC-CCC------
Confidence 2345678999999998899999999999999999998 999997543322 11 1111111 000
Q ss_pred ccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcC
Q 005693 618 MRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 662 (682)
Q Consensus 618 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~~ 662 (682)
.. ......+.+++.+||+.||++|||++|+++.|+++.+..
T Consensus 235 -~~---~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~ 275 (281)
T 3cc6_A 235 -KP---DLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQME 275 (281)
T ss_dssp -CC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred -CC---CCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHhh
Confidence 01 112345677888999999999999999999999987643
No 143
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=6.6e-38 Score=328.40 Aligned_cols=253 Identities=23% Similarity=0.396 Sum_probs=192.3
Q ss_pred hccccccCeEEEEEEEEcC----CceEEEEEeeccccC---hhhHHHHHHHHHHhcCCCceeceEEEEEecCc-----eE
Q 005693 390 AEVLGKGSYGTAYKAVLEE----STTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDE-----KL 457 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~----~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~-----~~ 457 (682)
.+.||+|+||.||+|.... +..||+|+++..... .+.+.+|+.++.++ +||||+++++++...+. .+
T Consensus 39 ~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~ 117 (313)
T 3brb_A 39 GKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDF-SHPNVIRLLGVCIEMSSQGIPKPM 117 (313)
T ss_dssp EEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTC-CCTTBCCCCEEEEC-------CEE
T ss_pred ccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcC-CCCCeeeeeEEEeeccccCCcccE
Confidence 5789999999999998653 347999998755333 34688899999999 89999999999987553 49
Q ss_pred EEEeeccCCchhHhhccCCC-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCC
Q 005693 458 LVYDYFASGSLSTLLHGNRG-AGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLT 536 (682)
Q Consensus 458 lV~e~~~~g~L~~~l~~~~~-~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla 536 (682)
+||||+++|+|.+++..... .....+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++
T Consensus 118 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NIli~~~~~~kl~Dfg~~ 194 (313)
T 3brb_A 118 VILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN---FLHRDLAARNCMLRDDMTVCVADFGLS 194 (313)
T ss_dssp EEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCSGGGEEECTTSCEEECSCSCC
T ss_pred EEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCcEEEeecCcc
Confidence 99999999999999854321 22345999999999999999999999998 999999999999999999999999999
Q ss_pred CCCCCCC------CCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccc
Q 005693 537 PLMNVPA------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWT 609 (682)
Q Consensus 537 ~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-g~~Pf~~~~~~~~~~l~~~~~~~~~~~~~ 609 (682)
....... ...+++.|+|||.+.+..++.++||||||+++|||++ |..||......+. .........
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~------~~~~~~~~~- 267 (313)
T 3brb_A 195 KKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEM------YDYLLHGHR- 267 (313)
T ss_dssp ----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH------HHHHHTTCC-
T ss_pred eecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHH------HHHHHcCCC-
Confidence 7654322 2335678999999999999999999999999999999 8899976543221 111111110
Q ss_pred cccchhhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCC
Q 005693 610 AEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDS 663 (682)
Q Consensus 610 ~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~~~ 663 (682)
. .........+.+++.+||+.||++|||++|++++|+++.+..+
T Consensus 268 ~----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~lp 311 (313)
T 3brb_A 268 L----------KQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESLP 311 (313)
T ss_dssp C----------CCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred C----------CCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcC
Confidence 0 0111223457778889999999999999999999999987654
No 144
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.4e-37 Score=330.62 Aligned_cols=242 Identities=21% Similarity=0.311 Sum_probs=189.3
Q ss_pred hccccccCeEEEEEEEEcCCceEEEEEeeccccC---hhhHHHHHHHHHHhcCC-CceeceEEEEEecCceEEEEeeccC
Q 005693 390 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQH-PNVVPLRAYYYSKDEKLLVYDYFAS 465 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h-~niv~l~~~~~~~~~~~lV~e~~~~ 465 (682)
.+.||+|+||.||++...+++.||+|++...... .+.+.+|++++.++.+| +||+++++++..++..++||| +.+
T Consensus 14 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~~~ 92 (343)
T 3dbq_A 14 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGN 92 (343)
T ss_dssp EEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC-CCS
T ss_pred EEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEe-CCC
Confidence 4789999999999999888899999999765433 25688999999999433 999999999999999999999 568
Q ss_pred CchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCCC--
Q 005693 466 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA-- 543 (682)
Q Consensus 466 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~-- 543 (682)
|+|.+++... ..+++.++..++.|++.||+|||+.+ |+||||||+|||++ ++.+||+|||+++......
T Consensus 93 ~~L~~~l~~~-----~~~~~~~~~~i~~qi~~al~~lH~~~---iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~ 163 (343)
T 3dbq_A 93 IDLNSWLKKK-----KSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS 163 (343)
T ss_dssp EEHHHHHHHS-----CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEE-TTEEEECCCSSSCCC------
T ss_pred CCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEEE-CCcEEEeecccccccCccccc
Confidence 8999999753 34899999999999999999999998 99999999999997 5789999999998764332
Q ss_pred ----CCCCCCcccCcccccc-----------CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcc
Q 005693 544 ----TPSRSAGYRAPEVIET-----------RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEW 608 (682)
Q Consensus 544 ----~~~~~~~y~aPE~~~~-----------~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~ 608 (682)
...||+.|+|||++.+ ..++.++|||||||++|||++|+.||.... +.............
T Consensus 164 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-----~~~~~~~~~~~~~~ 238 (343)
T 3dbq_A 164 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII-----NQISKLHAIIDPNH 238 (343)
T ss_dssp ------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCC-----SHHHHHHHHHCTTS
T ss_pred ccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhh-----hHHHHHHHHhcCCc
Confidence 3458999999999865 678899999999999999999999997432 11111222221111
Q ss_pred ccccchhhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 005693 609 TAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIE 656 (682)
Q Consensus 609 ~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~ 656 (682)
... .... ....+.+++.+||+.||++|||++|++++-.
T Consensus 239 ~~~-------~~~~---~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~ 276 (343)
T 3dbq_A 239 EIE-------FPDI---PEKDLQDVLKCCLKRDPKQRISIPELLAHPY 276 (343)
T ss_dssp CCC-------CCCC---SCHHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred ccC-------Cccc---CCHHHHHHHHHHcCCChhHCCCHHHHHhCcc
Confidence 100 0111 1235667888999999999999999998643
No 145
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.7e-38 Score=343.21 Aligned_cols=243 Identities=16% Similarity=0.262 Sum_probs=192.8
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeecccc----ChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeecc
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV----GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 464 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~----~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~ 464 (682)
.+.||+|+||+||+++.+ +++.||+|++++... ..+.+.+|.+++..+ +||||+++++++.+++..|+||||++
T Consensus 66 ~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~-~hp~Iv~l~~~~~~~~~~~lVmE~~~ 144 (412)
T 2vd5_A 66 LKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNG-DRRWITQLHFAFQDENYLYLVMEYYV 144 (412)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHS-CTTTBCCEEEEEECSSEEEEEECCCC
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhc-CCCCeeeEEEEEeeCCEEEEEEcCCC
Confidence 468999999999999985 578999999975321 234588899999988 99999999999999999999999999
Q ss_pred CCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCCC-
Q 005693 465 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA- 543 (682)
Q Consensus 465 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~- 543 (682)
+|+|.+++.... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 145 gg~L~~~l~~~~----~~l~~~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~~ 217 (412)
T 2vd5_A 145 GGDLLTLLSKFG----ERIPAEMARFYLAEIVMAIDSVHRLG---YVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGT 217 (412)
T ss_dssp SCBHHHHHHHHS----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCTTSC
T ss_pred CCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecccCHHHeeecCCCCEEEeechhheeccCCCc
Confidence 999999997432 24899999999999999999999998 9999999999999999999999999997664432
Q ss_pred ----CCCCCCcccCccccc-------cCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcccccc
Q 005693 544 ----TPSRSAGYRAPEVIE-------TRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEV 612 (682)
Q Consensus 544 ----~~~~~~~y~aPE~~~-------~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~ 612 (682)
...||+.|+|||++. ...++.++|||||||++|||++|+.||.+.... .....+.........
T Consensus 218 ~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~------~~~~~i~~~~~~~~~ 291 (412)
T 2vd5_A 218 VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTA------ETYGKIVHYKEHLSL 291 (412)
T ss_dssp EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH------HHHHHHHTHHHHCCC
T ss_pred cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHH------HHHHHHHhcccCcCC
Confidence 346899999999997 356899999999999999999999999764322 112222211100000
Q ss_pred chhhhccccChHHHHHHHHHHHHHcccCCCCCC---CCHHHHHHH
Q 005693 613 FDVELMRFQNIEEEMVQMLQIGMACVAKVPDMR---PNMDEVVRM 654 (682)
Q Consensus 613 ~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~R---Pt~~evl~~ 654 (682)
+. .... ....+.+++.+|+. +|++| |+++|++++
T Consensus 292 --p~--~~~~---~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 292 --PL--VDEG---VPEEARDFIQRLLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp --C------C---CCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred --Cc--cccC---CCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence 00 0011 22345667779999 99998 689999874
No 146
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=1.7e-38 Score=333.70 Aligned_cols=257 Identities=21% Similarity=0.362 Sum_probs=186.8
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeecccc--ChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccCC
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 466 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g 466 (682)
.+.||+|+||.||+|... +++.||+|+++.... ..+.+.+|++++.++ +||||+++++++..++..++||||++ |
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~-~ 87 (317)
T 2pmi_A 10 LEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKEL-KHENIVRLYDVIHTENKLTLVFEFMD-N 87 (317)
T ss_dssp ---------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTC-CBTTBCCEEEEECCTTEEEEEEECCC-C
T ss_pred eeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhc-CCCCcceEEEEEEECCeEEEEEEecC-C
Confidence 467999999999999865 478899999975432 346788999999999 89999999999999999999999998 5
Q ss_pred chhHhhccCCC-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCC---
Q 005693 467 SLSTLLHGNRG-AGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP--- 542 (682)
Q Consensus 467 ~L~~~l~~~~~-~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~--- 542 (682)
+|.+++..... .....+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 88 ~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~ 164 (317)
T 2pmi_A 88 DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK---ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNT 164 (317)
T ss_dssp BHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCSSCEETTSCCCC
T ss_pred CHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCChHHeEEcCCCCEEECcCccceecCCCccc
Confidence 99998864321 12235899999999999999999999998 999999999999999999999999999765432
Q ss_pred -CCCCCCCcccCcccccc-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhh----cccc----cc
Q 005693 543 -ATPSRSAGYRAPEVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVRE----EWTA----EV 612 (682)
Q Consensus 543 -~~~~~~~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~----~~~~----~~ 612 (682)
....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+. .......... .|.. ..
T Consensus 165 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~ 241 (317)
T 2pmi_A 165 FSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQ---LKLIFDIMGTPNESLWPSVTKLPK 241 (317)
T ss_dssp CCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHHHHHHHCSCCTTTCGGGGGCTT
T ss_pred CCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH---HHHHHHHhCCCChhHhhhhhhhhh
Confidence 23457889999999976 4589999999999999999999999986542211 1111111000 0000 00
Q ss_pred chhhhc--cccCh---------HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 613 FDVELM--RFQNI---------EEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 613 ~d~~l~--~~~~~---------~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
+..... ..... ......+.+++.+||+.||++|||++|++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 294 (317)
T 2pmi_A 242 YNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294 (317)
T ss_dssp CCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred cccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence 000000 00000 0122357788889999999999999999874
No 147
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=8.3e-38 Score=321.77 Aligned_cols=239 Identities=22% Similarity=0.414 Sum_probs=176.2
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeecccc----ChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeecc
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV----GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 464 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~----~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~ 464 (682)
.+.||+|+||.||+|... +++.||+|++..... ..+.+.+|++++.++ +||||+++++++.+.+..++||||++
T Consensus 16 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~ 94 (278)
T 3cok_A 16 GNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQL-KHPSILELYNYFEDSNYVYLVLEMCH 94 (278)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTB-CCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred eeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhC-CCCCeEeEEEEEccCCeEEEEEecCC
Confidence 468999999999999974 688999999975422 236788999999998 89999999999999999999999999
Q ss_pred CCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCCC-
Q 005693 465 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA- 543 (682)
Q Consensus 465 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~- 543 (682)
+++|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 95 ~~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 167 (278)
T 3cok_A 95 NGEMNRYLKNRV----KPFSENEARHFMHQIITGMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHE 167 (278)
T ss_dssp TEEHHHHHHTCS----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECSSCCGGGEEECTTCCEEECCCTTCEECC----
T ss_pred CCcHHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEEEeecceeeccCCCC
Confidence 999999997532 34899999999999999999999998 9999999999999999999999999987654322
Q ss_pred ---CCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhccc
Q 005693 544 ---TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 620 (682)
Q Consensus 544 ---~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 620 (682)
...+++.|+|||.+.+..++.++||||||+++|||++|+.||......+... ..... + ....
T Consensus 168 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~------~~~~~-------~--~~~~ 232 (278)
T 3cok_A 168 KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLN------KVVLA-------D--YEMP 232 (278)
T ss_dssp ------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----------CCSS-------C--CCCC
T ss_pred cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHH------HHhhc-------c--cCCc
Confidence 3457889999999998889999999999999999999999998654332211 00000 0 0001
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 621 QNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 621 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
.. ....+.+++.+||+.||++|||++|++++
T Consensus 233 ~~---~~~~~~~li~~~l~~dp~~Rps~~~~l~h 263 (278)
T 3cok_A 233 SF---LSIEAKDLIHQLLRRNPADRLSLSSVLDH 263 (278)
T ss_dssp TT---SCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred cc---cCHHHHHHHHHHcccCHhhCCCHHHHhcC
Confidence 11 22356678889999999999999999873
No 148
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=1.8e-37 Score=343.18 Aligned_cols=254 Identities=19% Similarity=0.234 Sum_probs=201.7
Q ss_pred hccccccCeEEEEEEEE-cCCceEEEEEeeccccChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccCCch
Q 005693 390 AEVLGKGSYGTAYKAVL-EESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL 468 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~L 468 (682)
.+.||+|+||.||+|.. .+++.||||++.... ...++.+|++++..+.+|+++..+..++...+..++||||+ +++|
T Consensus 12 ~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~-g~sL 89 (483)
T 3sv0_A 12 GRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-KHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL-GPSL 89 (483)
T ss_dssp CCCCEECSSCEEEEEEETTTCCEEEEEEEETTC-SSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC-CCBH
T ss_pred EEEEeeCCCEEEEEEEECCCCcEEEEEEecccc-ccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC-CCCH
Confidence 47899999999999997 457889999876543 34568899999999966688888888888888999999999 9999
Q ss_pred hHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEe---cCCCCeEEeecCCCCCCCCCC--
Q 005693 469 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLI---NQDLDGCISDFGLTPLMNVPA-- 543 (682)
Q Consensus 469 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl---~~~~~~kl~DfGla~~~~~~~-- 543 (682)
.+++.... ..+++..++.++.||+.||+|||+++ |+||||||+|||+ +.++.+||+|||+++......
T Consensus 90 ~~ll~~~~----~~l~~~~~~~i~~qi~~aL~yLH~~g---IvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (483)
T 3sv0_A 90 EDLFNFCS----RKLSLKTVLMLADQMINRVEFVHSKS---FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTH 162 (483)
T ss_dssp HHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTC
T ss_pred HHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccCcceEEEecCCCCCeEEEEeCCcceeccCCccc
Confidence 99997432 24999999999999999999999998 9999999999999 688999999999997654322
Q ss_pred ---------CCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccch
Q 005693 544 ---------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFD 614 (682)
Q Consensus 544 ---------~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 614 (682)
...+|+.|+|||++.+..++.++|||||||++|||++|+.||.+........ ....+...... ....
T Consensus 163 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~---~~~~i~~~~~~-~~~~ 238 (483)
T 3sv0_A 163 QHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQ---KYEKISEKKVA-TSIE 238 (483)
T ss_dssp CBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHH---HHHHHHHHHHH-SCHH
T ss_pred cccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHH---HHHHHhhcccc-ccHH
Confidence 3457889999999999999999999999999999999999998754432211 11111111110 0000
Q ss_pred hhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcC
Q 005693 615 VELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 662 (682)
Q Consensus 615 ~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~~ 662 (682)
.. .. .....+.+++.+||+.+|++||+++++++.|+++....
T Consensus 239 ~l---~~---~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~ 280 (483)
T 3sv0_A 239 AL---CR---GYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIRE 280 (483)
T ss_dssp HH---HT---TSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred HH---hc---CCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHc
Confidence 00 01 11345778888999999999999999999999987644
No 149
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=8e-38 Score=345.41 Aligned_cols=238 Identities=23% Similarity=0.368 Sum_probs=196.5
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeeccc----cChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeecc
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 464 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~ 464 (682)
.+.||+|+||.||+|+.. +++.||+|++.... ...+.+.+|+.+++.+ +||||+++++++...+..++||||++
T Consensus 21 ~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~lv~E~~~ 99 (476)
T 2y94_A 21 GDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLF-RHPHIIKLYQVISTPSDIFMVMEYVS 99 (476)
T ss_dssp EEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEEECCS
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEECCEEEEEEeCCC
Confidence 478999999999999976 68899999997542 1245688999999998 89999999999999999999999999
Q ss_pred CCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCC--
Q 005693 465 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP-- 542 (682)
Q Consensus 465 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~-- 542 (682)
+|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 100 gg~L~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~ 171 (476)
T 2y94_A 100 GGELFDYICKN-----GRLDEKESRRLFQQILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF 171 (476)
T ss_dssp SEEHHHHTTSS-----SSCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEECTTCCEEECCCSSCEECCTTCC
T ss_pred CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---CCcccccHHHEEEecCCCeEEEeccchhhcccccc
Confidence 99999999743 34899999999999999999999998 999999999999999999999999999876543
Q ss_pred -CCCCCCCcccCccccccCCC-CCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhccc
Q 005693 543 -ATPSRSAGYRAPEVIETRKH-SHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 620 (682)
Q Consensus 543 -~~~~~~~~y~aPE~~~~~~~-~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 620 (682)
....||+.|+|||++.+..+ +.++||||+||++|||++|+.||.+... ......+...... ..
T Consensus 172 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~------~~~~~~i~~~~~~---------~p 236 (476)
T 2y94_A 172 LRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHV------PTLFKKICDGIFY---------TP 236 (476)
T ss_dssp BCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSS------HHHHHHHHTTCCC---------CC
T ss_pred ccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCH------HHHHHHHhcCCcC---------CC
Confidence 24568999999999988776 6899999999999999999999975432 1222222221110 01
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 621 QNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 621 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
... ...+.+++.+||+.||++|||++|++++
T Consensus 237 ~~~---s~~~~~Li~~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 237 QYL---NPSVISLLKHMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp TTC---CHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred ccC---CHHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence 111 2346677889999999999999999984
No 150
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=1.3e-37 Score=325.74 Aligned_cols=256 Identities=20% Similarity=0.366 Sum_probs=194.4
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeecccc----ChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeecc
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV----GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 464 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~----~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~ 464 (682)
.+.||+|+||.||+|... +++.||+|+++.... ..+++.+|++++.++ +||||+++++++..++..++||||++
T Consensus 37 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~ 115 (310)
T 2wqm_A 37 EKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQL-NHPNVIKYYASFIEDNELNIVLELAD 115 (310)
T ss_dssp EEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEEETTEEEEEEECCC
T ss_pred EEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEcCCcEEEEEecCC
Confidence 478999999999999974 678999999975322 235688899999999 89999999999999999999999999
Q ss_pred CCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCCC-
Q 005693 465 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA- 543 (682)
Q Consensus 465 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~- 543 (682)
+|+|.+++..... ....+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||++.......
T Consensus 116 ~~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 191 (310)
T 2wqm_A 116 AGDLSRMIKHFKK-QKRLIPERTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT 191 (310)
T ss_dssp SCBHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCC-----------
T ss_pred CCCHHHHHHHhcc-cccCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCcHHHEEEcCCCCEEEEeccceeeecCCCc
Confidence 9999999864321 1334899999999999999999999998 9999999999999999999999999987654322
Q ss_pred ---CCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhccc
Q 005693 544 ---TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 620 (682)
Q Consensus 544 ---~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 620 (682)
...+++.|+|||++.+..++.++||||||+++|||++|+.||.+... ............... .. ..
T Consensus 192 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~----~~~~~~~~~~~~~~~-~~------~~ 260 (310)
T 2wqm_A 192 AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM----NLYSLCKKIEQCDYP-PL------PS 260 (310)
T ss_dssp -------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---C----CHHHHHHHHHTTCSC-CC------CT
T ss_pred cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccch----hHHHHHHHhhcccCC-CC------cc
Confidence 23578899999999999999999999999999999999999975421 222222222111111 00 00
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCCC
Q 005693 621 QNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSE 664 (682)
Q Consensus 621 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~~~~ 664 (682)
......+.+++.+||+.||++|||++|+++.|+++.+....
T Consensus 261 ---~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~ 301 (310)
T 2wqm_A 261 ---DHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTAS 301 (310)
T ss_dssp ---TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred ---cccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhh
Confidence 11233566778899999999999999999999999987654
No 151
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=1.4e-37 Score=322.50 Aligned_cols=245 Identities=24% Similarity=0.347 Sum_probs=195.7
Q ss_pred ccccccCeEEEEEEEEc---CCceEEEEEeeccccC---hhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeecc
Q 005693 391 EVLGKGSYGTAYKAVLE---ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 464 (682)
Q Consensus 391 ~~lG~G~fg~Vy~~~~~---~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~ 464 (682)
+.||+|+||.||+|.+. .++.||+|+++..... .+++.+|++++..+ +||||+++++++ ..+..++||||++
T Consensus 23 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~-~~~~~~lv~e~~~ 100 (291)
T 1xbb_A 23 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL-DNPYIVRMIGIC-EAESWMLVMEMAE 100 (291)
T ss_dssp EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTC-CCTTBCCEEEEE-ESSSEEEEEECCT
T ss_pred CccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCEEEEEEEE-CCCCcEEEEEeCC
Confidence 38999999999999653 3578999999765332 45788999999999 899999999999 5678899999999
Q ss_pred CCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCCCC
Q 005693 465 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPAT 544 (682)
Q Consensus 465 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~~ 544 (682)
+|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++........
T Consensus 101 ~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 172 (291)
T 1xbb_A 101 LGPLNKYLQQN-----RHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 172 (291)
T ss_dssp TEEHHHHHHHC-----TTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTCEECCTTCS
T ss_pred CCCHHHHHHhC-----cCCCHHHHHHHHHHHHHHHHHHHhCC---eEcCCCCcceEEEeCCCcEEEccCCcceeeccCCC
Confidence 99999999753 23899999999999999999999998 99999999999999999999999999976643321
Q ss_pred -------CCCCCcccCccccccCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchhh
Q 005693 545 -------PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVE 616 (682)
Q Consensus 545 -------~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-g~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 616 (682)
..+++.|+|||.+.+..++.++||||||+++|||++ |+.||......+ ....+.......
T Consensus 173 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~-------~~~~~~~~~~~~----- 240 (291)
T 1xbb_A 173 YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE-------VTAMLEKGERMG----- 240 (291)
T ss_dssp EEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH-------HHHHHHTTCCCC-----
T ss_pred cccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHH-------HHHHHHcCCCCC-----
Confidence 234678999999998889999999999999999999 999997543211 111111111000
Q ss_pred hccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcC
Q 005693 617 LMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 662 (682)
Q Consensus 617 l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~~ 662 (682)
........+.+++.+||+.||++||+++|+++.|+++....
T Consensus 241 -----~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~ 281 (291)
T 1xbb_A 241 -----CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDV 281 (291)
T ss_dssp -----CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred -----CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHH
Confidence 01122345677888999999999999999999999988654
No 152
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=5.9e-38 Score=328.42 Aligned_cols=252 Identities=20% Similarity=0.310 Sum_probs=192.0
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeeccccC----hhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeecc
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG----KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 464 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~----~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~ 464 (682)
.+.||+|+||.||+|... +++.||+|++...... .+.+.+|+.++.++ +||||+++++++..++..++||||++
T Consensus 39 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~ 117 (309)
T 2h34_A 39 RRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRL-QEPHVVPIHDFGEIDGQLYVDMRLIN 117 (309)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEEEEEECCC
T ss_pred EEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhc-CCCCeeEEEEEEeeCCeEEEEEEecC
Confidence 478999999999999976 5778999998765332 25688899999998 99999999999999999999999999
Q ss_pred CCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCCC-
Q 005693 465 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA- 543 (682)
Q Consensus 465 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~- 543 (682)
+++|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 118 ~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 189 (309)
T 2h34_A 118 GVDLAAMLRRQ-----GPLAPPRAVAIVRQIGSALDAAHAAG---ATHRDVKPENILVSADDFAYLVDFGIASATTDEKL 189 (309)
T ss_dssp CEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSCCC---------
T ss_pred CCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCc---CCcCCCChHHEEEcCCCCEEEecCccCcccccccc
Confidence 99999999743 24899999999999999999999998 9999999999999999999999999987654332
Q ss_pred ----CCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhcc
Q 005693 544 ----TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMR 619 (682)
Q Consensus 544 ----~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 619 (682)
...+++.|+|||++.+..++.++||||||+++|||++|+.||..... ............ ... ..
T Consensus 190 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-------~~~~~~~~~~~~----~~~-~~ 257 (309)
T 2h34_A 190 TQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQL-------SVMGAHINQAIP----RPS-TV 257 (309)
T ss_dssp -------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHH-------HHHHHHHHSCCC----CGG-GT
T ss_pred ccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchH-------HHHHHHhccCCC----Ccc-cc
Confidence 33578899999999999999999999999999999999999975321 111111111110 000 00
Q ss_pred ccChHHHHHHHHHHHHHcccCCCCCCC-CHHHHHHHHHHhhhcCCCC
Q 005693 620 FQNIEEEMVQMLQIGMACVAKVPDMRP-NMDEVVRMIEEVRQSDSEN 665 (682)
Q Consensus 620 ~~~~~~~~~~l~~l~~~Cl~~dP~~RP-t~~evl~~L~~i~~~~~~~ 665 (682)
.. .....+.+++.+||+.||++|| +++++++.|+++.+.....
T Consensus 258 ~~---~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~~~~ 301 (309)
T 2h34_A 258 RP---GIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATADQD 301 (309)
T ss_dssp ST---TCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC-----
T ss_pred CC---CCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhhccc
Confidence 11 1223466777899999999999 9999999999887666543
No 153
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=4.7e-37 Score=316.89 Aligned_cols=251 Identities=20% Similarity=0.368 Sum_probs=200.0
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeecccc-------ChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEe
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV-------GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYD 461 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-------~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e 461 (682)
.+.||+|+||.||+|... +++.||+|+++.... ..+.+.+|++++.++ +||||+++++++.+.+..++|||
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e 88 (283)
T 3bhy_A 10 GEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREI-RHPNIITLHDIFENKTDVVLILE 88 (283)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEEE
T ss_pred HHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhC-CCCCeeehhheecCCCeEEEEEe
Confidence 578999999999999986 578999999875432 256789999999999 89999999999999999999999
Q ss_pred eccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCC----CeEEeecCCCC
Q 005693 462 YFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDL----DGCISDFGLTP 537 (682)
Q Consensus 462 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~----~~kl~DfGla~ 537 (682)
|+++++|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++ .+||+|||++.
T Consensus 89 ~~~~~~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~ 160 (283)
T 3bhy_A 89 LVSGGELFDFLAEK-----ESLTEDEATQFLKQILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH 160 (283)
T ss_dssp CCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred ecCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChHHEEEecCCCCCCceEEEecccce
Confidence 99999999999642 24899999999999999999999998 99999999999999877 89999999997
Q ss_pred CCCCCC---CCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccch
Q 005693 538 LMNVPA---TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFD 614 (682)
Q Consensus 538 ~~~~~~---~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 614 (682)
...... ...+++.|+|||++.+..++.++||||||+++|||++|+.||...... ............ .+
T Consensus 161 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~~~~~~~~~~~---~~ 231 (283)
T 3bhy_A 161 KIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQ------ETLTNISAVNYD---FD 231 (283)
T ss_dssp ECC--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHH------HHHHHHHTTCCC---CC
T ss_pred eccCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchH------HHHHHhHhcccC---Cc
Confidence 654332 335788999999999999999999999999999999999999754321 111111111100 00
Q ss_pred hhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHHHhhhcCC
Q 005693 615 VELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVR--MIEEVRQSDS 663 (682)
Q Consensus 615 ~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~--~L~~i~~~~~ 663 (682)
.. ... .....+.+++.+||+.||++|||++|+++ .++.+.....
T Consensus 232 ~~--~~~---~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~~~ 277 (283)
T 3bhy_A 232 EE--YFS---NTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRRNV 277 (283)
T ss_dssp HH--HHT---TCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHHHCCC
T ss_pred ch--hcc---cCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHHHHhh
Confidence 00 001 12235677888999999999999999998 5677765543
No 154
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=2.8e-37 Score=318.68 Aligned_cols=242 Identities=21% Similarity=0.328 Sum_probs=195.3
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeeccccC---hhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccC
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 465 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~ 465 (682)
.+.||+|+||.||+|... +++.||+|++...... .+.+.+|++++.++ +||||+++++++.+++..++||||+++
T Consensus 11 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~e~~~~ 89 (284)
T 3kk8_A 11 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL-QHPNIVRLHDSIQEESFHYLVFDLVTG 89 (284)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred hhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHc-CCCCcCeEEEEEEcCCEEEEEEecCCC
Confidence 468999999999999976 4788999999765443 24577899999999 899999999999999999999999999
Q ss_pred CchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCC---eEEeecCCCCCCCCC
Q 005693 466 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLD---GCISDFGLTPLMNVP 542 (682)
Q Consensus 466 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~---~kl~DfGla~~~~~~ 542 (682)
|+|.+.+... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++. +||+|||++......
T Consensus 90 ~~l~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~ 161 (284)
T 3kk8_A 90 GELFEDIVAR-----EFYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 161 (284)
T ss_dssp CBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSS
T ss_pred CCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccC
Confidence 9999888643 34899999999999999999999998 999999999999987665 999999999766543
Q ss_pred C---CCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhcc
Q 005693 543 A---TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMR 619 (682)
Q Consensus 543 ~---~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 619 (682)
. ...+++.|+|||++.+..++.++||||||+++|+|++|+.||...... ............. ....
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~------~~~~~~~~~~~~~-----~~~~ 230 (284)
T 3kk8_A 162 EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH------RLYAQIKAGAYDY-----PSPE 230 (284)
T ss_dssp CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHTCCCC-----CTTT
T ss_pred ccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchh------HHHHHHHhccccC-----Cchh
Confidence 3 345788999999999999999999999999999999999999754321 1122221111110 0001
Q ss_pred ccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 620 FQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 620 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
.. .....+.+++.+||+.||++|||++|++++
T Consensus 231 ~~---~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 231 WD---TVTPEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp TT---TSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred hc---ccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 11 122346677789999999999999999985
No 155
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=7.8e-39 Score=338.46 Aligned_cols=254 Identities=24% Similarity=0.358 Sum_probs=202.0
Q ss_pred hccccccCeEEEEEEEEcCC------ceEEEEEeecccc--ChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEe
Q 005693 390 AEVLGKGSYGTAYKAVLEES------TTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYD 461 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~~------~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e 461 (682)
.+.||+|+||.||+|..... ..||+|.++.... ..+.+.+|++++.++.+||||+++++++..++..++|||
T Consensus 51 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e 130 (333)
T 2i1m_A 51 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITE 130 (333)
T ss_dssp EEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCceEEEEe
Confidence 57899999999999997532 3699999976532 245688999999999789999999999999999999999
Q ss_pred eccCCchhHhhccCCC---------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEee
Q 005693 462 YFASGSLSTLLHGNRG---------AGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISD 532 (682)
Q Consensus 462 ~~~~g~L~~~l~~~~~---------~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~D 532 (682)
|+++|+|.+++..... .....+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|
T Consensus 131 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~D 207 (333)
T 2i1m_A 131 YCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGD 207 (333)
T ss_dssp CCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGCEEEGGGEEEBCC
T ss_pred cCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCC---cccCCcccceEEECCCCeEEECc
Confidence 9999999999964321 01234799999999999999999999998 99999999999999999999999
Q ss_pred cCCCCCCCCCC------CCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhh
Q 005693 533 FGLTPLMNVPA------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVR 605 (682)
Q Consensus 533 fGla~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-g~~Pf~~~~~~~~~~l~~~~~~~~~ 605 (682)
||++....... ...+++.|+|||++.+..++.++||||||+++|||+| |..||.+....+ .......
T Consensus 208 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~------~~~~~~~ 281 (333)
T 2i1m_A 208 FGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS------KFYKLVK 281 (333)
T ss_dssp CGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH------HHHHHHH
T ss_pred cccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH------HHHHHHh
Confidence 99997654322 2234668999999999899999999999999999999 999997643221 1112222
Q ss_pred hccccccchhhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcC
Q 005693 606 EEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 662 (682)
Q Consensus 606 ~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~~ 662 (682)
...... .. ......+.+++.+||+.||++|||++|+++.|+++.+..
T Consensus 282 ~~~~~~-------~~---~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~ 328 (333)
T 2i1m_A 282 DGYQMA-------QP---AFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQED 328 (333)
T ss_dssp HTCCCC-------CC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred cCCCCC-------CC---CCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHhh
Confidence 211110 00 112345677888999999999999999999999987654
No 156
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=6.2e-38 Score=324.26 Aligned_cols=244 Identities=22% Similarity=0.325 Sum_probs=190.5
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeecccc--ChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccCC
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 466 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g 466 (682)
.+.||+|+||.||++... ++..+|+|++..... ..+.+.+|++++.++ +||||+++++++.+.+..++||||+++|
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~~~ 105 (285)
T 3is5_A 27 KRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSL-DHPNIIKIFEVFEDYHNMYIVMETCEGG 105 (285)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEECCCSCC
T ss_pred cceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhC-CCchHHhHHHheecCCeEEEEEEeCCCC
Confidence 578999999999999975 477899999876543 357789999999999 8999999999999999999999999999
Q ss_pred chhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEe---cCCCCeEEeecCCCCCCCCC-
Q 005693 467 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLI---NQDLDGCISDFGLTPLMNVP- 542 (682)
Q Consensus 467 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl---~~~~~~kl~DfGla~~~~~~- 542 (682)
+|.+++..... ....+++..+..++.|++.||+|||+.+ |+||||||+||++ +.++.+||+|||++......
T Consensus 106 ~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~ 181 (285)
T 3is5_A 106 ELLERIVSAQA-RGKALSEGYVAELMKQMMNALAYFHSQH---VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE 181 (285)
T ss_dssp BHHHHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-----
T ss_pred cHHHHHHhhhh-cccCCCHHHHHHHHHHHHHHHHHHHhCC---EEECCCCHHHEEEecCCCCCCEEEEeeecceecCCcc
Confidence 99998854321 1234899999999999999999999998 9999999999999 45678999999999765433
Q ss_pred --CCCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhccc
Q 005693 543 --ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 620 (682)
Q Consensus 543 --~~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 620 (682)
....+++.|+|||++. ..++.++||||||+++|||++|+.||.+.... ............... ..
T Consensus 182 ~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~------~~~~~~~~~~~~~~~------~~ 248 (285)
T 3is5_A 182 HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLE------EVQQKATYKEPNYAV------EC 248 (285)
T ss_dssp -----CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHCCCCCCC--------
T ss_pred cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHH------HHHhhhccCCccccc------cc
Confidence 2345788999999986 56889999999999999999999999754311 111111111100000 00
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 621 QNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 621 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
.. ....+.+++.+||+.||++|||++|++++
T Consensus 249 ~~---~~~~~~~li~~~L~~dP~~Rps~~e~l~h 279 (285)
T 3is5_A 249 RP---LTPQAVDLLKQMLTKDPERRPSAAQVLHH 279 (285)
T ss_dssp CC---CCHHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred Cc---CCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 11 12356678889999999999999999863
No 157
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.5e-37 Score=331.53 Aligned_cols=256 Identities=14% Similarity=0.166 Sum_probs=198.9
Q ss_pred hccccccCeEEEEEEEEcC---------CceEEEEEeeccccChhhHHHHHHHHHHhcCCCceec---------------
Q 005693 390 AEVLGKGSYGTAYKAVLEE---------STTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVP--------------- 445 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~---------~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~--------------- 445 (682)
.+.||+|+||.||+|+... ++.||+|++... +.+.+|++++.++ +||||++
T Consensus 47 ~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~----~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~i~~ 121 (352)
T 2jii_A 47 KSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD----GRLFNEQNFFQRA-AKPLQVNKWKKLYSTPLLAIPT 121 (352)
T ss_dssp EEEEEEETTEEEEEEEECC-----------CEEEEEEETT----STHHHHHHHHHHH-CCHHHHHHHHHHTTCTTCSCCC
T ss_pred EEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc----chHHHHHHHHHHh-cccchhhhhhhhccCCccCccc
Confidence 4789999999999999764 688999998753 5788999999999 8999887
Q ss_pred eEEEEEe-cCceEEEEeeccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecC
Q 005693 446 LRAYYYS-KDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQ 524 (682)
Q Consensus 446 l~~~~~~-~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~ 524 (682)
+++++.. +...++||||+ +|+|.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.
T Consensus 122 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp~NIl~~~ 194 (352)
T 2jii_A 122 CMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP---KHVLSERSVLQVACRLLDALEFLHENE---YVHGNVTAENIFVDP 194 (352)
T ss_dssp CCEEEEETTTEEEEEEECC-CEEHHHHHHHSG---GGCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCGGGEEEET
T ss_pred hhhccccCCcEEEEEecCC-CcCHHHHHHhCC---cCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCHHHEEEcC
Confidence 6778776 67889999999 999999998542 234999999999999999999999998 999999999999999
Q ss_pred CC--CeEEeecCCCCCCCCC-----------CCCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCC
Q 005693 525 DL--DGCISDFGLTPLMNVP-----------ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRD 591 (682)
Q Consensus 525 ~~--~~kl~DfGla~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~ 591 (682)
++ .+||+|||+++..... ....+++.|+|||++.+..++.++||||||+++|||++|+.||......
T Consensus 195 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~ 274 (352)
T 2jii_A 195 EDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPN 274 (352)
T ss_dssp TEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC
T ss_pred CCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcC
Confidence 98 8999999999765422 2235788999999999999999999999999999999999999854321
Q ss_pred CCCChhHHHHHHhhhccccccchhhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCCC
Q 005693 592 DMVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSE 664 (682)
Q Consensus 592 ~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~~~~ 664 (682)
. ..+........ .. .....+.. ...... ...+.+++.+||+.||++|||++|+++.|+++.+....
T Consensus 275 ~-~~~~~~~~~~~-~~-~~~~~~~~-~~~~~~---~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~ 340 (352)
T 2jii_A 275 T-EDIMKQKQKFV-DK-PGPFVGPC-GHWIRP---SETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLRV 340 (352)
T ss_dssp H-HHHHHHHHHHH-HS-CCCEECTT-SCEECC---CHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred H-HHHHHHHHhcc-CC-hhhhhhhc-cccCCC---cHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcCC
Confidence 1 11111111111 10 01111100 001111 24566777899999999999999999999999877643
No 158
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=2.1e-37 Score=318.11 Aligned_cols=241 Identities=22% Similarity=0.339 Sum_probs=194.0
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeecccc--ChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccCC
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 466 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g 466 (682)
.+.||+|+||.||+|... +++.||+|++..... ..+.+.+|+.++..+ +||||+++++++.+++..++||||+++|
T Consensus 12 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 90 (276)
T 2yex_A 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML-NHENVVKFYGHRREGNIQYLFLEYCSGG 90 (276)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTC-CCTTBCCEEEEEEETTEEEEEEECCTTE
T ss_pred EEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhc-CCCCceeeeeEEEcCCEEEEEEEecCCC
Confidence 578999999999999976 578899999875433 246788999999998 8999999999999999999999999999
Q ss_pred chhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCC-----
Q 005693 467 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV----- 541 (682)
Q Consensus 467 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~----- 541 (682)
+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||.+.....
T Consensus 91 ~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~ 162 (276)
T 2yex_A 91 ELFDRIEPD-----IGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162 (276)
T ss_dssp EGGGGSBTT-----TBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECEETTEEC
T ss_pred cHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCChHHEEEccCCCEEEeeCCCccccCCCcchh
Confidence 999999643 34899999999999999999999998 99999999999999999999999999875432
Q ss_pred -CCCCCCCCcccCccccccCCC-CCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhcc
Q 005693 542 -PATPSRSAGYRAPEVIETRKH-SHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMR 619 (682)
Q Consensus 542 -~~~~~~~~~y~aPE~~~~~~~-~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 619 (682)
.....+++.|+|||++.+..+ +.++||||||+++|||++|+.||........ .. ......... .
T Consensus 163 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~----~~~~~~~~~---~------ 228 (276)
T 2yex_A 163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ-EY----SDWKEKKTY---L------ 228 (276)
T ss_dssp CBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSH-HH----HHHHTTCTT---S------
T ss_pred cccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHH-HH----HHhhhcccc---c------
Confidence 223457889999999987765 7789999999999999999999976543211 11 111111000 0
Q ss_pred ccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 620 FQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 620 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
.........+.+++.+||+.||++|||++|++++
T Consensus 229 -~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (276)
T 2yex_A 229 -NPWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (276)
T ss_dssp -TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred -CchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcC
Confidence 0011123356678889999999999999999764
No 159
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=3.4e-37 Score=317.00 Aligned_cols=241 Identities=21% Similarity=0.318 Sum_probs=194.6
Q ss_pred hccccccCeEEEEEEEEcC-CceEEEEEeeccc-cChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccCCc
Q 005693 390 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVV-VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGS 467 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~-~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~ 467 (682)
.+.||+|+||.||+|.... +..+|+|++.... ...+.+.+|++++.++ +||||+++++++.+.+..++||||+++++
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 92 (277)
T 3f3z_A 14 ENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSL-DHPNIIRLYETFEDNTDIYLVMELCTGGE 92 (277)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEEECCCSCB
T ss_pred eeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhC-CCCCEeeEEEEEecCCeEEEEEeccCCCc
Confidence 5789999999999999765 5679999987653 3467899999999999 99999999999999999999999999999
Q ss_pred hhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEe---cCCCCeEEeecCCCCCCCCC--
Q 005693 468 LSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLI---NQDLDGCISDFGLTPLMNVP-- 542 (682)
Q Consensus 468 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl---~~~~~~kl~DfGla~~~~~~-- 542 (682)
|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||++ +.++.+||+|||++......
T Consensus 93 L~~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~ 164 (277)
T 3f3z_A 93 LFERVVHK-----RVFRESDAARIMKDVLSAVAYCHKLN---VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM 164 (277)
T ss_dssp HHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSC
T ss_pred HHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccc
Confidence 99998743 23899999999999999999999998 9999999999999 78899999999999765433
Q ss_pred -CCCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhcccc
Q 005693 543 -ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQ 621 (682)
Q Consensus 543 -~~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 621 (682)
....+++.|+|||++.+. ++.++||||||+++|||++|+.||...... ............. ... ...
T Consensus 165 ~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~------~~~~~~~~~~~~~--~~~---~~~ 232 (277)
T 3f3z_A 165 MRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDS------EVMLKIREGTFTF--PEK---DWL 232 (277)
T ss_dssp BCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHCCCCC--CHH---HHT
T ss_pred hhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHH------HHHHHHHhCCCCC--Cch---hhh
Confidence 234578899999998654 899999999999999999999999754321 1111111111100 000 000
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 622 NIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 622 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
.....+.+++.+|++.||++|||+.|++++
T Consensus 233 ---~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 262 (277)
T 3f3z_A 233 ---NVSPQAESLIRRLLTKSPKQRITSLQALEH 262 (277)
T ss_dssp ---TSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred ---cCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 123456778889999999999999999973
No 160
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=1.4e-38 Score=341.99 Aligned_cols=247 Identities=13% Similarity=0.033 Sum_probs=177.4
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeecccc----ChhhHHHHHHHHHHhc-CCCceeceE-------EEEEecC--
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV----GKRDFEQQMEIVGRVG-QHPNVVPLR-------AYYYSKD-- 454 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~----~~~~~~~e~~~l~~l~-~h~niv~l~-------~~~~~~~-- 454 (682)
.+.||+|+||.||+|... +++.||+|++..... ..+.+.+|++++..+. +||||++++ +++..+.
T Consensus 67 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~~~~~ 146 (371)
T 3q60_A 67 VEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQSQP 146 (371)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEETTSC
T ss_pred eeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheecCCCC
Confidence 478999999999999975 578899999987543 2345677877777664 599988755 5554432
Q ss_pred ---------------ceEEEEeeccCCchhHhhccCCCCCCCCCCHHHH------HHHHHHHHHHHHHHHhcCCCCcEec
Q 005693 455 ---------------EKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETR------VKILLGTARGVAHIHSMGGPKFTHG 513 (682)
Q Consensus 455 ---------------~~~lV~e~~~~g~L~~~l~~~~~~~~~~l~~~~~------~~i~~~ia~gl~~LH~~~~~~ivHr 513 (682)
..++||||++ |+|.+++..... .+++..+ ..++.||+.||+|||+++ |+||
T Consensus 147 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~----~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~---ivHr 218 (371)
T 3q60_A 147 PFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF----VYVFRGDEGILALHILTAQLIRLAANLQSKG---LVHG 218 (371)
T ss_dssp SSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH----SCCCCHHHHHHHHHHHHHHHHHHHHHHHHTT---EEET
T ss_pred CeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc----ccchhhhhhhhhHHHHHHHHHHHHHHHHHCC---CccC
Confidence 3799999999 899999975321 2444555 778899999999999998 9999
Q ss_pred CCCCCCeEecCCCCeEEeecCCCCCCCCCC-CCCCCCcccCcccccc--CCCCCcchHHHHHHHHHHHHhCCCCCCCCCC
Q 005693 514 NIKASNVLINQDLDGCISDFGLTPLMNVPA-TPSRSAGYRAPEVIET--RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTR 590 (682)
Q Consensus 514 DLk~~NILl~~~~~~kl~DfGla~~~~~~~-~~~~~~~y~aPE~~~~--~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~ 590 (682)
||||+|||++.++.+||+|||+++...... ...+++.|+|||++.+ ..++.++|||||||++|||++|+.||.....
T Consensus 219 Dikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~ 298 (371)
T 3q60_A 219 HFTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTP 298 (371)
T ss_dssp TCSGGGEEECTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCT
T ss_pred cCCHHHEEECCCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCc
Confidence 999999999999999999999998776544 4456789999999987 6799999999999999999999999986643
Q ss_pred CCCCChhHHHHHHhhhccccccchhhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005693 591 DDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVR 653 (682)
Q Consensus 591 ~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 653 (682)
....... ............ ...........+.+++.+||+.||++|||++|+++
T Consensus 299 ~~~~~~~--------~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 299 GIKGSWK--------RPSLRVPGTDSL-AFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp TCTTCCC--------BCCTTSCCCCSC-CCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred ccccchh--------hhhhhhcccccc-chhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 2211100 000000000000 00101122345667778999999999999999986
No 161
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=1.9e-37 Score=335.61 Aligned_cols=258 Identities=17% Similarity=0.255 Sum_probs=197.8
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeeccccChhhHHHHHHHHHHhcC-------CCceeceEEEEE----ecCceE
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQ-------HPNVVPLRAYYY----SKDEKL 457 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~-------h~niv~l~~~~~----~~~~~~ 457 (682)
.+.||+|+||+||+|+.. +++.||+|+++......+.+.+|++++..+.+ |+||+++++++. +....+
T Consensus 42 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~ 121 (397)
T 1wak_A 42 IRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHIC 121 (397)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTEEEEE
T ss_pred EEEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCCceEE
Confidence 468999999999999965 46789999997654445678899999998842 888999999998 456789
Q ss_pred EEEeeccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCcEecCCCCCCeEecCCC----------
Q 005693 458 LVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSM-GGPKFTHGNIKASNVLINQDL---------- 526 (682)
Q Consensus 458 lV~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~-~~~~ivHrDLk~~NILl~~~~---------- 526 (682)
+||||+ +|+|.+++.... ...+++..++.++.||+.||+|||++ + |+||||||+|||++.++
T Consensus 122 lv~e~~-~~~l~~~~~~~~---~~~~~~~~~~~i~~qi~~aL~~lH~~~g---ivHrDikp~NIll~~~~~~~~~~~~~~ 194 (397)
T 1wak_A 122 MVFEVL-GHHLLKWIIKSN---YQGLPLPCVKKIIQQVLQGLDYLHTKCR---IIHTDIKPENILLSVNEQYIRRLAAEA 194 (397)
T ss_dssp EEECCC-CCBHHHHHHHTT---TSCCCHHHHHHHHHHHHHHHHHHHHTTC---EECCCCSGGGEEECCCHHHHHHHHHHH
T ss_pred EEEecc-CccHHHHHHhcc---cCCCCHHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHeeEeccchhhhhhhhhh
Confidence 999999 566766665432 23489999999999999999999998 7 99999999999999775
Q ss_pred ---------------------------------------CeEEeecCCCCCCCCC-CCCCCCCcccCccccccCCCCCcc
Q 005693 527 ---------------------------------------DGCISDFGLTPLMNVP-ATPSRSAGYRAPEVIETRKHSHKS 566 (682)
Q Consensus 527 ---------------------------------------~~kl~DfGla~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~s 566 (682)
.+||+|||++...... ....+|+.|+|||++.+..++.++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~ 274 (397)
T 1wak_A 195 TEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPA 274 (397)
T ss_dssp C---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHHHTSCCCTHH
T ss_pred HHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCChhhcCCCCCcHH
Confidence 7999999999766543 334689999999999999999999
Q ss_pred hHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhh---h---------ccccccch------------------hh
Q 005693 567 DVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVR---E---------EWTAEVFD------------------VE 616 (682)
Q Consensus 567 DvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~---~---------~~~~~~~d------------------~~ 616 (682)
|||||||++|||++|+.||......+...-......+.. . .+....+. ..
T Consensus 275 DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (397)
T 1wak_A 275 DIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVL 354 (397)
T ss_dssp HHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHH
T ss_pred HHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhHhh
Confidence 999999999999999999987654443211111111110 0 00000000 00
Q ss_pred hccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 617 LMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 617 l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
........+....+.+++.+||+.||++|||++|++++
T Consensus 355 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 392 (397)
T 1wak_A 355 VEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH 392 (397)
T ss_dssp HHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred hhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence 01112235666788999999999999999999999874
No 162
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.2e-37 Score=329.98 Aligned_cols=232 Identities=22% Similarity=0.314 Sum_probs=192.5
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeecccc---------ChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEE
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV---------GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLV 459 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---------~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV 459 (682)
.+.||+|+||.||+|... +++.||+|+++.... ..+.+.+|++++.++ +||||+++++++.+.+..++|
T Consensus 29 ~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~~~~~lv 107 (335)
T 3dls_A 29 MSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRV-EHANIIKVLDIFENQGFFQLV 107 (335)
T ss_dssp EEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTC-CCTTBCCEEEEEECSSEEEEE
T ss_pred EeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhC-CCCCEeeEEEEEeeCCEEEEE
Confidence 578999999999999964 577899999976532 234677899999999 999999999999999999999
Q ss_pred EeeccCC-chhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCC
Q 005693 460 YDYFASG-SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPL 538 (682)
Q Consensus 460 ~e~~~~g-~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~ 538 (682)
|||+.+| +|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.
T Consensus 108 ~e~~~~g~~l~~~~~~~-----~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~ 179 (335)
T 3dls_A 108 MEKHGSGLDLFAFIDRH-----PRLDEPLASYIFRQLVSAVGYLRLKD---IIHRDIKDENIVIAEDFTIKLIDFGSAAY 179 (335)
T ss_dssp EECCTTSCBHHHHHHTC-----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEeCCCCccHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---eEEeccCHHHEEEcCCCcEEEeecccceE
Confidence 9999777 999999743 24899999999999999999999998 99999999999999999999999999987
Q ss_pred CCCCC---CCCCCCcccCccccccCCC-CCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccch
Q 005693 539 MNVPA---TPSRSAGYRAPEVIETRKH-SHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFD 614 (682)
Q Consensus 539 ~~~~~---~~~~~~~y~aPE~~~~~~~-~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 614 (682)
..... ...+|+.|+|||++.+..+ +.++|||||||++|||++|+.||....... .
T Consensus 180 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~---------------------~ 238 (335)
T 3dls_A 180 LERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETV---------------------E 238 (335)
T ss_dssp CCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGGT---------------------T
T ss_pred CCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHHH---------------------h
Confidence 65433 2357899999999988876 789999999999999999999997422100 0
Q ss_pred hhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 615 VELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 615 ~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
........ ....+.+++.+||+.||++|||++|++++
T Consensus 239 ~~~~~~~~---~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 239 AAIHPPYL---VSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp TCCCCSSC---CCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred hccCCCcc---cCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00001111 12346677789999999999999999985
No 163
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=5.2e-38 Score=336.98 Aligned_cols=234 Identities=21% Similarity=0.275 Sum_probs=182.3
Q ss_pred hccccccCeEEEEEEEEcC-CceEEEEEeeccccC----hhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeecc
Q 005693 390 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVVVG----KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 464 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~----~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~ 464 (682)
.+.||+|+||.||+|+.+. ++.||+|+++..... ...+.+|..++.+..+||||+++++++.+.+..|+||||++
T Consensus 43 ~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~ 122 (373)
T 2r5t_A 43 LKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYIN 122 (373)
T ss_dssp EEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEEEeCCC
Confidence 4789999999999999864 678999999765432 23445565554333389999999999999999999999999
Q ss_pred CCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCC---
Q 005693 465 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV--- 541 (682)
Q Consensus 465 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~--- 541 (682)
+|+|.+++... ..+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 123 gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~~ 194 (373)
T 2r5t_A 123 GGELFYHLQRE-----RCFLEPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNS 194 (373)
T ss_dssp SCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCCC
T ss_pred CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCCCCEEEeeCccccccccCCC
Confidence 99999999743 24889999999999999999999998 99999999999999999999999999975322
Q ss_pred -CCCCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhccc
Q 005693 542 -PATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 620 (682)
Q Consensus 542 -~~~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 620 (682)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||.+... ......+..... ...
T Consensus 195 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~------~~~~~~i~~~~~---------~~~ 259 (373)
T 2r5t_A 195 TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT------AEMYDNILNKPL---------QLK 259 (373)
T ss_dssp CCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBH------HHHHHHHHHSCC---------CCC
T ss_pred ccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH------HHHHHHHHhccc---------CCC
Confidence 2345689999999999999999999999999999999999999975432 122222222111 011
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCCCHH
Q 005693 621 QNIEEEMVQMLQIGMACVAKVPDMRPNMD 649 (682)
Q Consensus 621 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ 649 (682)
...+ ..+.+++.+||+.||++||++.
T Consensus 260 ~~~~---~~~~~li~~lL~~dp~~R~~~~ 285 (373)
T 2r5t_A 260 PNIT---NSARHLLEGLLQKDRTKRLGAK 285 (373)
T ss_dssp SSSC---HHHHHHHHHHTCSSGGGSTTTT
T ss_pred CCCC---HHHHHHHHHHcccCHHhCCCCC
Confidence 1222 3456677799999999999975
No 164
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=2.1e-37 Score=346.10 Aligned_cols=244 Identities=19% Similarity=0.299 Sum_probs=197.1
Q ss_pred ccccccCeEEEEEEEEc-CCceEEEEEeeccc----cChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccC
Q 005693 391 EVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 465 (682)
Q Consensus 391 ~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~ 465 (682)
+.||+|+||.||+|+.. +++.||+|++.... ...+.+.+|++++.++ +||||+++++++.+.+..++||||+++
T Consensus 191 ~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l-~hp~Iv~l~~~~~~~~~l~lVmE~~~g 269 (543)
T 3c4z_A 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-HSRFIVSLAYAFETKTDLCLVMTIMNG 269 (543)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhc-CCCCEeeEEEEEeeCCEEEEEEEeccC
Confidence 57999999999999986 57899999997543 2345688899999999 999999999999999999999999999
Q ss_pred CchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCCC--
Q 005693 466 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA-- 543 (682)
Q Consensus 466 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~-- 543 (682)
|+|.+++..... ....+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 270 g~L~~~l~~~~~-~~~~l~e~~~~~~~~qi~~aL~~LH~~g---IvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~~ 345 (543)
T 3c4z_A 270 GDIRYHIYNVDE-DNPGFQEPRAIFYTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK 345 (543)
T ss_dssp CBHHHHHHTSST-TSCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCC
T ss_pred CCHHHHHHHhhc-ccccccHHHHHHHHHHHHHHHHHHHHcC---CcccCCChHHEEEeCCCCEEEeecceeeeccCCCcc
Confidence 999999975432 2345899999999999999999999998 9999999999999999999999999997654332
Q ss_pred --CCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhcccc
Q 005693 544 --TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQ 621 (682)
Q Consensus 544 --~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 621 (682)
...||+.|+|||++.+..++.++|||||||++|||++|+.||.+..... ........+..... ....
T Consensus 346 ~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~--~~~~~~~~i~~~~~---------~~p~ 414 (543)
T 3c4z_A 346 TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV--ENKELKQRVLEQAV---------TYPD 414 (543)
T ss_dssp BCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCC--CHHHHHHHHHHCCC---------CCCT
T ss_pred cccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccch--hHHHHHHHHhhccc---------CCCc
Confidence 3468999999999999999999999999999999999999998653221 22222222222111 0111
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCCCH-----HHHHH
Q 005693 622 NIEEEMVQMLQIGMACVAKVPDMRPNM-----DEVVR 653 (682)
Q Consensus 622 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~-----~evl~ 653 (682)
.. ...+.+++.+||+.||++||++ +|+++
T Consensus 415 ~~---s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~ 448 (543)
T 3c4z_A 415 KF---SPASKDFCEALLQKDPEKRLGFRDGSCDGLRT 448 (543)
T ss_dssp TS---CHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred cc---CHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence 12 2345667779999999999965 66765
No 165
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=5.3e-38 Score=323.34 Aligned_cols=247 Identities=26% Similarity=0.411 Sum_probs=193.3
Q ss_pred hccccccCeEEEEEEEEcCCceEEEEEeeccccChhhHHHHHHHHHHhcCCCceeceEEEEEec-CceEEEEeeccCCch
Q 005693 390 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSK-DEKLLVYDYFASGSL 468 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~-~~~~lV~e~~~~g~L 468 (682)
.+.||+|+||.||++... ++.||+|+++... ..+.+.+|++++.++ +||||+++++++.+. +..++||||+++|+|
T Consensus 26 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~-~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L 102 (278)
T 1byg_A 26 LQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-TAQAFLAEASVMTQL-RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSL 102 (278)
T ss_dssp EEEEEECSSCEEEEEEET-TEEEEEEECCCCC---HHHHHTHHHHTTC-CCTTBCCEEEEECCC--CCEEEECCCTTEEH
T ss_pred EeEEecCCCceEEEEEEc-CCEEEEEEecchh-HHHHHHHHHHHHHhC-CCCCEeeEEEEEEcCCCceEEEEecCCCCCH
Confidence 578999999999999875 7899999987543 456788999999999 899999999997654 478999999999999
Q ss_pred hHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCCC-CCCC
Q 005693 469 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA-TPSR 547 (682)
Q Consensus 469 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~-~~~~ 547 (682)
.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++....... ...+
T Consensus 103 ~~~l~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 176 (278)
T 1byg_A 103 VDYLRSRG---RSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL 176 (278)
T ss_dssp HHHHHHHH---HHHCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTSCEEECCCCC------------C
T ss_pred HHHHHhcc---cccCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCCcceEEEeCCCcEEEeeccccccccccccCCCc
Confidence 99997432 123788999999999999999999998 9999999999999999999999999987654432 3346
Q ss_pred CCcccCccccccCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhccccChHHH
Q 005693 548 SAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEE 626 (682)
Q Consensus 548 ~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-g~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 626 (682)
++.|+|||++.+..++.++||||||+++|||+| |+.||......+ ...... ..... ......
T Consensus 177 ~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~------~~~~~~-~~~~~----------~~~~~~ 239 (278)
T 1byg_A 177 PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD------VVPRVE-KGYKM----------DAPDGC 239 (278)
T ss_dssp CTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGG------HHHHHT-TTCCC----------CCCTTC
T ss_pred cccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH------HHHHHh-cCCCC----------CCcccC
Confidence 788999999998899999999999999999998 999997543221 111111 11100 011122
Q ss_pred HHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcC
Q 005693 627 MVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 662 (682)
Q Consensus 627 ~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~~ 662 (682)
...+.+++.+||+.||++|||++|+++.|++++...
T Consensus 240 ~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~~ 275 (278)
T 1byg_A 240 PPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHE 275 (278)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhhh
Confidence 345677888999999999999999999999998654
No 166
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=7e-38 Score=342.89 Aligned_cols=193 Identities=23% Similarity=0.319 Sum_probs=168.7
Q ss_pred hccccccCeEEEEEEEEcC-CceEEEEEeeccccChhhHHHHHHHHHHhc-----CCCceeceEEEEEecCceEEEEeec
Q 005693 390 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVVVGKRDFEQQMEIVGRVG-----QHPNVVPLRAYYYSKDEKLLVYDYF 463 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~~~~~~~e~~~l~~l~-----~h~niv~l~~~~~~~~~~~lV~e~~ 463 (682)
.+.||+|+||+||+|.... ++.||||+++......+.+.+|++++..+. +|+||+++++++...+..++||||+
T Consensus 102 ~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~ 181 (429)
T 3kvw_A 102 LKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELL 181 (429)
T ss_dssp EEEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEEEECCC
T ss_pred EEEcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEEEEecc
Confidence 4789999999999998764 788999999765444567788888888774 5779999999999999999999999
Q ss_pred cCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCC--eEEeecCCCCCCCC
Q 005693 464 ASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLD--GCISDFGLTPLMNV 541 (682)
Q Consensus 464 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~--~kl~DfGla~~~~~ 541 (682)
. |+|.+++.... ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++. +||+|||++.....
T Consensus 182 ~-~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~~ 254 (429)
T 3kvw_A 182 S-MNLYELIKKNK---FQGFSLPLVRKFAHSILQCLDALHKNR---IIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQ 254 (429)
T ss_dssp C-CBHHHHHHHTT---TCCCCHHHHHHHHHHHHHHHHHHHHHT---EECSCCSGGGEEESSTTSCCEEECCCTTCEETTC
T ss_pred C-CCHHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEccCCCcceEEeecccceecCC
Confidence 6 69999987543 234899999999999999999999998 999999999999999987 99999999976554
Q ss_pred C-CCCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCC
Q 005693 542 P-ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPT 589 (682)
Q Consensus 542 ~-~~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~ 589 (682)
. ....+|+.|+|||++.+..++.++|||||||++|||++|+.||.+..
T Consensus 255 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~ 303 (429)
T 3kvw_A 255 RVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGED 303 (429)
T ss_dssp CCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCC
Confidence 3 34568899999999999999999999999999999999999998654
No 167
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=7.2e-38 Score=344.85 Aligned_cols=237 Identities=20% Similarity=0.277 Sum_probs=187.4
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeecccc----ChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeecc
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV----GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 464 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~----~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~ 464 (682)
.+.||+|+||.||+|... +++.||+|+++.... ....+.+|++++..+ +||||+++++++...+..++||||++
T Consensus 153 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~e~~~ 231 (446)
T 4ejn_A 153 LKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS-RHPFLTALKYSFQTHDRLCFVMEYAN 231 (446)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCC-SCTTSCCEEEEEEETTEEEEEECCCS
T ss_pred eEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhC-CCCeEeeEEEEEeeCCEEEEEEeeCC
Confidence 578999999999999975 478899999975421 234567788888888 89999999999999999999999999
Q ss_pred CCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCC-
Q 005693 465 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHS-MGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP- 542 (682)
Q Consensus 465 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~-~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~- 542 (682)
+|+|.+++... ..+++..+..++.|++.||+|||+ .+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 232 ~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~g---iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 303 (446)
T 4ejn_A 232 GGELFFHLSRE-----RVFSEDRARFYGAEIVSALDYLHSEKN---VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG 303 (446)
T ss_dssp SCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHHTC---CCCCCCCGGGEEECSSSCEEECCCCCCCTTCC--
T ss_pred CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHhhcCC---EEECCCCHHHEEECCCCCEEEccCCCceeccCCC
Confidence 99999999743 248999999999999999999998 77 999999999999999999999999999764322
Q ss_pred ---CCCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhcc
Q 005693 543 ---ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMR 619 (682)
Q Consensus 543 ---~~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 619 (682)
....||+.|+|||++.+..++.++|||||||++|||++|+.||.+... ......+...... .
T Consensus 304 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~------~~~~~~i~~~~~~---------~ 368 (446)
T 4ejn_A 304 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH------EKLFELILMEEIR---------F 368 (446)
T ss_dssp ---CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHCCCC---------C
T ss_pred cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH------HHHHHHHHhCCCC---------C
Confidence 244689999999999999999999999999999999999999975432 1122222211110 0
Q ss_pred ccChHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 005693 620 FQNIEEEMVQMLQIGMACVAKVPDMRP-----NMDEVVR 653 (682)
Q Consensus 620 ~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~evl~ 653 (682)
... ....+.+++.+||+.||++|| +++|+++
T Consensus 369 p~~---~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 369 PRT---LGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp CTT---SCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred Ccc---CCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 111 223566777899999999999 9999987
No 168
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=6.5e-38 Score=328.93 Aligned_cols=255 Identities=20% Similarity=0.364 Sum_probs=196.2
Q ss_pred hccccccCeEEEEEEEE-cCCceEEEEEeeccc-cChhhHHHHHHHHHHhcCCCceeceEEEEEe----cCceEEEEeec
Q 005693 390 AEVLGKGSYGTAYKAVL-EESTTVVVKRLKEVV-VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYS----KDEKLLVYDYF 463 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~-~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~----~~~~~lV~e~~ 463 (682)
.+.||+|+||.||++.. .+++.||+|++.... ...+.+.+|++++..+ +||||+++++++.. ....++||||+
T Consensus 34 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~lv~e~~ 112 (317)
T 2buj_A 34 IQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLF-NHPNILRLVAYCLRERGAKHEAWLLLPFF 112 (317)
T ss_dssp EEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTC-CCTTBCCCCEEEEEEETTEEEEEEEEECC
T ss_pred EEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhc-CCCCeeeEEEEEEeccCCCceeEEEEEeC
Confidence 47899999999999997 467899999986542 2346788999999999 99999999999873 34678999999
Q ss_pred cCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCCC
Q 005693 464 ASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA 543 (682)
Q Consensus 464 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~ 543 (682)
++|+|.+++..... ....+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 113 ~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~ 188 (317)
T 2buj_A 113 KRGTLWNEIERLKD-KGNFLTEDQILWLLLGICRGLEAIHAKG---YAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHV 188 (317)
T ss_dssp TTCBHHHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCSSCEESCEEE
T ss_pred CCCcHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEcCCCCEEEEecCcchhccccc
Confidence 99999999975322 2345899999999999999999999998 9999999999999999999999999987654211
Q ss_pred -------------CCCCCCcccCccccccCC---CCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhc
Q 005693 544 -------------TPSRSAGYRAPEVIETRK---HSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREE 607 (682)
Q Consensus 544 -------------~~~~~~~y~aPE~~~~~~---~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~ 607 (682)
...+++.|+|||++.+.. ++.++||||||+++|||++|+.||........ .... .....
T Consensus 189 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-~~~~----~~~~~ 263 (317)
T 2buj_A 189 EGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGD-SVAL----AVQNQ 263 (317)
T ss_dssp ESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTS-CHHH----HHHCC
T ss_pred ccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccc-hhhH----Hhhcc
Confidence 123588899999987654 68899999999999999999999963211110 1110 00000
Q ss_pred cccccchhhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCCC
Q 005693 608 WTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSE 664 (682)
Q Consensus 608 ~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~~~~ 664 (682)
. ...........+.+++.+||+.||++|||++|++++|+++......
T Consensus 264 ~----------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~~~ 310 (317)
T 2buj_A 264 L----------SIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAPG 310 (317)
T ss_dssp ------------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCCCC
T ss_pred C----------CCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCCCC
Confidence 0 0000112234567788899999999999999999999998765544
No 169
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=1e-37 Score=322.07 Aligned_cols=241 Identities=21% Similarity=0.322 Sum_probs=193.6
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeecccc---ChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccC
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV---GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 465 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~ 465 (682)
.+.||+|+||+||+|... +++.||+|+++.... ...++.+|+..+..+.+||||+++++++.+++..++||||+++
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 95 (289)
T 1x8b_A 16 LEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNG 95 (289)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred hhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEEecCC
Confidence 578999999999999986 688999999976432 2456778888888887899999999999999999999999999
Q ss_pred CchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCC-------------------C
Q 005693 466 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQD-------------------L 526 (682)
Q Consensus 466 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~-------------------~ 526 (682)
|+|.+++..... ....+++..+..++.|++.||+|||+++ |+||||||+||+++.+ .
T Consensus 96 ~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~ 171 (289)
T 1x8b_A 96 GSLADAISENYR-IMSYFKEAELKDLLLQVGRGLRYIHSMS---LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKV 171 (289)
T ss_dssp CBHHHHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEC--------------------CC
T ss_pred CcHHHHHHhhcc-cccCCCHHHHHHHHHHHHHHHHHHHhCC---EeecCCCHHHEEEcCCCCCcccccccccccccCCce
Confidence 999999975321 1234899999999999999999999998 9999999999999844 4
Q ss_pred CeEEeecCCCCCCCCCCCCCCCCcccCccccccC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhh
Q 005693 527 DGCISDFGLTPLMNVPATPSRSAGYRAPEVIETR-KHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVR 605 (682)
Q Consensus 527 ~~kl~DfGla~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~ 605 (682)
.+||+|||.+..........+++.|+|||++.+. .++.++||||||+++|||++|..|+.... . .....
T Consensus 172 ~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~--------~-~~~~~- 241 (289)
T 1x8b_A 172 MFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD--------Q-WHEIR- 241 (289)
T ss_dssp CEEECCCTTCEETTCSCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH--------H-HHHHH-
T ss_pred EEEEcccccccccCCccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh--------H-HHHHH-
Confidence 7999999999888777777799999999999876 56689999999999999999998764321 0 11111
Q ss_pred hccccccchhhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 606 EEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 606 ~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
....... ... ....+.+++.+||+.||++|||++|++++
T Consensus 242 ~~~~~~~-------~~~---~~~~~~~li~~~l~~dp~~Rps~~~ll~h 280 (289)
T 1x8b_A 242 QGRLPRI-------PQV---LSQEFTELLKVMIHPDPERRPSAMALVKH 280 (289)
T ss_dssp TTCCCCC-------SSC---CCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred cCCCCCC-------Ccc---cCHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence 1111100 111 22356677789999999999999999874
No 170
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=5.3e-38 Score=330.38 Aligned_cols=251 Identities=23% Similarity=0.375 Sum_probs=200.0
Q ss_pred hccccccCeEEEEEEEEc------CCceEEEEEeecccc--ChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEe
Q 005693 390 AEVLGKGSYGTAYKAVLE------ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYD 461 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~------~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e 461 (682)
.+.||+|+||.||+|... .++.||+|++..... ....+.+|++++..+ +||||+++++++.+.+..++|||
T Consensus 30 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e 108 (322)
T 1p4o_A 30 SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEF-NCHHVVRLLGVVSQGQPTLVIME 108 (322)
T ss_dssp EEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGC-CCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhc-CCCCEeeeEEEEccCCccEEEEE
Confidence 578999999999999865 357799999975432 234688899999999 89999999999999999999999
Q ss_pred eccCCchhHhhccCCC-----CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCC
Q 005693 462 YFASGSLSTLLHGNRG-----AGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLT 536 (682)
Q Consensus 462 ~~~~g~L~~~l~~~~~-----~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla 536 (682)
|+++|+|.+++..... .....+++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++
T Consensus 109 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~NIli~~~~~~kl~Dfg~~ 185 (322)
T 1p4o_A 109 LMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMT 185 (322)
T ss_dssp CCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCSGGGEEECTTCCEEECCTTCC
T ss_pred eCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---CccCCCccceEEEcCCCeEEECcCccc
Confidence 9999999999974321 11234789999999999999999999998 999999999999999999999999998
Q ss_pred CCCCCCC------CCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccc
Q 005693 537 PLMNVPA------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWT 609 (682)
Q Consensus 537 ~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-g~~Pf~~~~~~~~~~l~~~~~~~~~~~~~ 609 (682)
+...... ...+++.|+|||++.+..++.++||||||+++|||++ |..||..... .............
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~------~~~~~~~~~~~~~ 259 (322)
T 1p4o_A 186 RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN------EQVLRFVMEGGLL 259 (322)
T ss_dssp CGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCH------HHHHHHHHTTCCC
T ss_pred cccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCH------HHHHHHHHcCCcC
Confidence 7653321 2234678999999999899999999999999999999 8999975432 1112221111110
Q ss_pred cccchhhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 005693 610 AEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQS 661 (682)
Q Consensus 610 ~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~ 661 (682)
. .. ......+.+++.+||+.||++|||++|++++|+++...
T Consensus 260 -~-------~~---~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~ 300 (322)
T 1p4o_A 260 -D-------KP---DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 300 (322)
T ss_dssp -C-------CC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCT
T ss_pred -C-------CC---CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhcc
Confidence 0 01 12234567788899999999999999999999987653
No 171
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=4.7e-37 Score=317.26 Aligned_cols=238 Identities=22% Similarity=0.323 Sum_probs=195.1
Q ss_pred hccccccCeEEEEEEEEcC-CceEEEEEeeccc----cChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeecc
Q 005693 390 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 464 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~ 464 (682)
.+.||+|+||.||+|.... +..||+|++.... ...+.+.+|++++.++ +||||+++++++.+.+..++||||++
T Consensus 19 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~ 97 (284)
T 2vgo_A 19 GRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL-RHPNILRMYNYFHDRKRIYLMLEFAP 97 (284)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred eheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcC-CCCCEeeEEEEEEcCCEEEEEEEeCC
Confidence 5789999999999999764 6689999986542 2346788999999999 89999999999999999999999999
Q ss_pred CCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCC--
Q 005693 465 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP-- 542 (682)
Q Consensus 465 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~-- 542 (682)
+|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 98 ~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 169 (284)
T 2vgo_A 98 RGELYKELQKHG-----RFDEQRSATFMEELADALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRR 169 (284)
T ss_dssp TEEHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTTCCEEECCCTTCEECSSSCB
T ss_pred CCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEEcCCCCEEEecccccccCccccc
Confidence 999999997432 4899999999999999999999998 999999999999999999999999998655432
Q ss_pred CCCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhccccC
Q 005693 543 ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQN 622 (682)
Q Consensus 543 ~~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~ 622 (682)
....+++.|+|||++.+..++.++||||||+++|||++|+.||...... ........... .....
T Consensus 170 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------~~~~~~~~~~~---------~~~~~ 234 (284)
T 2vgo_A 170 RTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHT------ETHRRIVNVDL---------KFPPF 234 (284)
T ss_dssp CCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH------HHHHHHHTTCC---------CCCTT
T ss_pred ccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHh------HHHHHHhcccc---------CCCCc
Confidence 3445788999999999999999999999999999999999999754311 11111111110 01111
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 623 IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 623 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
....+.+++.+|++.||++|||++|++++
T Consensus 235 ---~~~~~~~li~~~l~~~p~~Rps~~~ll~h 263 (284)
T 2vgo_A 235 ---LSDGSKDLISKLLRYHPPQRLPLKGVMEH 263 (284)
T ss_dssp ---SCHHHHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred ---CCHHHHHHHHHHhhcCHhhCCCHHHHhhC
Confidence 22345677889999999999999999984
No 172
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-37 Score=333.08 Aligned_cols=244 Identities=21% Similarity=0.341 Sum_probs=194.7
Q ss_pred hccccccCeEEEEEEEE----cCCceEEEEEeeccc-----cChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEE
Q 005693 390 AEVLGKGSYGTAYKAVL----EESTTVVVKRLKEVV-----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVY 460 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~----~~~~~vavK~l~~~~-----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~ 460 (682)
.+.||+|+||.||+++. .+++.||+|+++... ...+.+.+|++++..+.+||||+++++++..++..++||
T Consensus 59 ~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 138 (355)
T 1vzo_A 59 LKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLIL 138 (355)
T ss_dssp EEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEEEEE
T ss_pred EEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCceEEEEe
Confidence 57899999999999997 367899999987532 234567789999999978999999999999999999999
Q ss_pred eeccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCC
Q 005693 461 DYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN 540 (682)
Q Consensus 461 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~ 540 (682)
||+++|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 139 e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 210 (355)
T 1vzo_A 139 DYINGGELFTHLSQR-----ERFTEHEVQIYVGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSKEFV 210 (355)
T ss_dssp CCCCSCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEESCSSEEEECC
T ss_pred ecCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCcEEEeeCCCCeecc
Confidence 999999999999743 24899999999999999999999998 9999999999999999999999999987653
Q ss_pred CC-----CCCCCCCcccCcccccc--CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccc
Q 005693 541 VP-----ATPSRSAGYRAPEVIET--RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 613 (682)
Q Consensus 541 ~~-----~~~~~~~~y~aPE~~~~--~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 613 (682)
.. ....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||....... ..............
T Consensus 211 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~--~~~~~~~~~~~~~~----- 283 (355)
T 1vzo_A 211 ADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKN--SQAEISRRILKSEP----- 283 (355)
T ss_dssp GGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCC--CHHHHHHHHHHCCC-----
T ss_pred cCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccc--hHHHHHHHHhccCC-----
Confidence 22 22358899999999985 347899999999999999999999997554322 22222222221110
Q ss_pred hhhhccccChHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHHH
Q 005693 614 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRP-----NMDEVVRMI 655 (682)
Q Consensus 614 d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~evl~~L 655 (682)
....+....+.+++.+||+.||++|| +++|++++.
T Consensus 284 -------~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 284 -------PYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp -------CCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred -------CCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 00111223466788899999999999 999998854
No 173
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.6e-37 Score=319.17 Aligned_cols=237 Identities=23% Similarity=0.344 Sum_probs=173.8
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeecccc----ChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeecc
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV----GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 464 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~----~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~ 464 (682)
.+.||+|+||.||+|... +++.||+|++..... ..+.+.+|+++++.+ +||||+++++++.+.+..++||||+
T Consensus 18 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~- 95 (275)
T 2eue_A 18 VKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLL-RHPHIIKLYDVIKSKDEIIMVIEYA- 95 (275)
T ss_dssp CC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSCEEEEEECC-
T ss_pred EEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhC-CCCCeEEEEEEEecCCeEEEEehhc-
Confidence 367999999999999864 578999999875432 245788999999999 8999999999999999999999999
Q ss_pred CCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCCC-
Q 005693 465 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA- 543 (682)
Q Consensus 465 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~- 543 (682)
+++|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||++.......
T Consensus 96 ~~~l~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 167 (275)
T 2eue_A 96 GNELFDYIVQR-----DKMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF 167 (275)
T ss_dssp CEEHHHHHHTS-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTSCEEECCSSCC--------
T ss_pred CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---CeeccCChHhEEECCCCCEEEeecccceeccCccc
Confidence 67888888643 34899999999999999999999998 9999999999999999999999999997665432
Q ss_pred --CCCCCCcccCccccccCCC-CCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhccc
Q 005693 544 --TPSRSAGYRAPEVIETRKH-SHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 620 (682)
Q Consensus 544 --~~~~~~~y~aPE~~~~~~~-~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 620 (682)
...+++.|+|||++.+..+ +.++||||||+++|||++|+.||.... .............. ..
T Consensus 168 ~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------~~~~~~~~~~~~~~---------~~ 232 (275)
T 2eue_A 168 LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES------IPVLFKNISNGVYT---------LP 232 (275)
T ss_dssp -------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHTCCC---------CC
T ss_pred ccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHhCCCC---------CC
Confidence 3457889999999988765 789999999999999999999997543 11111221111110 01
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 621 QNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 621 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
. .....+.+++.+||+.||++|||++|++++
T Consensus 233 ~---~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 263 (275)
T 2eue_A 233 K---FLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp T---TSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred c---cCCHHHHHHHHHHhhcCHhHCCCHHHHhhC
Confidence 1 122346677889999999999999999874
No 174
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=3.7e-37 Score=325.08 Aligned_cols=250 Identities=20% Similarity=0.298 Sum_probs=191.7
Q ss_pred hccccccCeEEEEEEEE-cCCceEEEEEeeccccChhhHHHHHHHHHHhcCCCceeceEEEEEe--cCceEEEEeeccCC
Q 005693 390 AEVLGKGSYGTAYKAVL-EESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYS--KDEKLLVYDYFASG 466 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~--~~~~~lV~e~~~~g 466 (682)
.+.||+|+||+||+|.. .+++.||+|+++.. ..+.+.+|++++.++.+||||+++++++.+ ....++||||++++
T Consensus 41 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~ 118 (330)
T 3nsz_A 41 VRKLGRGKYSEVFEAINITNNEKVVVKILKPV--KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNT 118 (330)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECSC--CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEECCCCC
T ss_pred EEEecccCCeEEEEEEECCCCcEEEEEEeccc--chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEeccCch
Confidence 47899999999999986 45788999998743 357889999999999669999999999987 56789999999999
Q ss_pred chhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCC-CeEEeecCCCCCCCCCC--
Q 005693 467 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDL-DGCISDFGLTPLMNVPA-- 543 (682)
Q Consensus 467 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~-~~kl~DfGla~~~~~~~-- 543 (682)
+|.+++.. +++..+..++.|++.||+|||+.+ |+||||||+|||++.++ .+||+|||+++......
T Consensus 119 ~l~~~~~~--------~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~ 187 (330)
T 3nsz_A 119 DFKQLYQT--------LTDYDIRFYMYEILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY 187 (330)
T ss_dssp CHHHHGGG--------CCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCCC
T ss_pred hHHHHHHh--------CCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCcc
Confidence 99999852 889999999999999999999998 99999999999999777 89999999997654332
Q ss_pred -CCCCCCcccCcccccc-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcccccc-------ch
Q 005693 544 -TPSRSAGYRAPEVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEV-------FD 614 (682)
Q Consensus 544 -~~~~~~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~-------~d 614 (682)
...+++.|+|||++.+ ..++.++|||||||++|||++|+.||....... ..+........... ..+. .+
T Consensus 188 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~-~~l~~~~~~~~~~~-~~~~~~~~~~~~~ 265 (330)
T 3nsz_A 188 NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNY-DQLVRIAKVLGTED-LYDYIDKYNIELD 265 (330)
T ss_dssp CSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHH-HHHHHHHHHHCHHH-HHHHHHHTTCCCC
T ss_pred ccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchH-HHHHHHHHhcCCch-hhhHHHHhccccc
Confidence 3457888999999977 668999999999999999999999996432210 00111000000000 0000 00
Q ss_pred hh---------------hccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 615 VE---------------LMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 615 ~~---------------l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
+. .............+.+++.+||+.||++|||++|++++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h 320 (330)
T 3nsz_A 266 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 320 (330)
T ss_dssp THHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred cchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 00 00001111134567788889999999999999999874
No 175
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2e-37 Score=329.15 Aligned_cols=247 Identities=20% Similarity=0.255 Sum_probs=190.8
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeeccc------cChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEee
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV------VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDY 462 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~------~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~ 462 (682)
.+.||+|+||.||+|... ++..||+|++.... ...+.+.+|++++.++ +||||+++++++.+.+..++||||
T Consensus 31 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~ 109 (345)
T 3hko_A 31 KGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKL-HHPNIARLYEVYEDEQYICLVMEL 109 (345)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEEEC
T ss_pred cceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhC-CCCCcceeehhhccCCeEEEEEeC
Confidence 678999999999999975 46789999987542 2235788999999999 899999999999999999999999
Q ss_pred ccCCchhHhhccCCCC-----------------------------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCC
Q 005693 463 FASGSLSTLLHGNRGA-----------------------------------GRTPLDWETRVKILLGTARGVAHIHSMGG 507 (682)
Q Consensus 463 ~~~g~L~~~l~~~~~~-----------------------------------~~~~l~~~~~~~i~~~ia~gl~~LH~~~~ 507 (682)
+++|+|.+++...... ....+++..+..++.|++.||+|||+.+
T Consensus 110 ~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~- 188 (345)
T 3hko_A 110 CHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQG- 188 (345)
T ss_dssp CCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHHTT-
T ss_pred CCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC-
Confidence 9999999998521110 0112467788899999999999999998
Q ss_pred CCcEecCCCCCCeEecCCC--CeEEeecCCCCCCCC--------CCCCCCCCcccCcccccc--CCCCCcchHHHHHHHH
Q 005693 508 PKFTHGNIKASNVLINQDL--DGCISDFGLTPLMNV--------PATPSRSAGYRAPEVIET--RKHSHKSDVYSFGVLL 575 (682)
Q Consensus 508 ~~ivHrDLk~~NILl~~~~--~~kl~DfGla~~~~~--------~~~~~~~~~y~aPE~~~~--~~~~~~sDvwS~Gvvl 575 (682)
|+||||||+||+++.++ .+||+|||+++.... .....+++.|+|||++.+ ..++.++||||||+++
T Consensus 189 --ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il 266 (345)
T 3hko_A 189 --ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLL 266 (345)
T ss_dssp --EECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHH
T ss_pred --ccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHHHHH
Confidence 99999999999998776 899999999975422 123457889999999975 6789999999999999
Q ss_pred HHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 576 LEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 576 ~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
|||++|+.||.+.... .............. .+ ........+.+++.+||+.||++|||++|++++
T Consensus 267 ~el~~g~~pf~~~~~~------~~~~~~~~~~~~~~--~~------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~h 331 (345)
T 3hko_A 267 HLLLMGAVPFPGVNDA------DTISQVLNKKLCFE--NP------NYNVLSPLARDLLSNLLNRNVDERFDAMRALQH 331 (345)
T ss_dssp HHHHHSSCSSCCSSHH------HHHHHHHHCCCCTT--SG------GGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHS
T ss_pred HHHHHCCCCCCCCChH------HHHHHHHhcccccC--Cc------ccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 9999999999754321 11222222111100 00 011123456678889999999999999999983
No 176
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=7.9e-37 Score=327.52 Aligned_cols=243 Identities=19% Similarity=0.358 Sum_probs=194.2
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeeccccC---------hhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEE
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG---------KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLV 459 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~---------~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV 459 (682)
.+.||+|+||.||+|... +++.||||++...... .+.+.+|+.++.++.+||||+++++++......++|
T Consensus 99 ~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 178 (365)
T 2y7j_A 99 KDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLV 178 (365)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSEEEEE
T ss_pred ceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCEEEEE
Confidence 378999999999999986 6889999998754321 245778999999997899999999999999999999
Q ss_pred EeeccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCC
Q 005693 460 YDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM 539 (682)
Q Consensus 460 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~ 539 (682)
|||+++|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+||++++++.+||+|||++...
T Consensus 179 ~e~~~g~~L~~~l~~~-----~~l~~~~~~~i~~qi~~~L~~LH~~g---i~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~ 250 (365)
T 2y7j_A 179 FDLMRKGELFDYLTEK-----VALSEKETRSIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFSCHL 250 (365)
T ss_dssp ECCCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEeCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEEEecCccccc
Confidence 9999999999999742 34899999999999999999999998 999999999999999999999999998765
Q ss_pred CCC---CCCCCCCcccCcccccc------CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcccc
Q 005693 540 NVP---ATPSRSAGYRAPEVIET------RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTA 610 (682)
Q Consensus 540 ~~~---~~~~~~~~y~aPE~~~~------~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~ 610 (682)
... ....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||..... ......+.......
T Consensus 251 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~------~~~~~~i~~~~~~~ 324 (365)
T 2y7j_A 251 EPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQ------ILMLRMIMEGQYQF 324 (365)
T ss_dssp CTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHTCCCC
T ss_pred CCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCH------HHHHHHHHhCCCCC
Confidence 443 23468899999999863 3578899999999999999999999975321 11111111111100
Q ss_pred ccchhhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 611 EVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 611 ~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
..+ ... .....+.+++.+||+.||++|||++|++++
T Consensus 325 --~~~---~~~---~~~~~~~~li~~~L~~dP~~Rps~~ell~h 360 (365)
T 2y7j_A 325 --SSP---EWD---DRSSTVKDLISRLLQVDPEARLTAEQALQH 360 (365)
T ss_dssp --CHH---HHS---SSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred --CCc---ccc---cCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 000 001 122346778889999999999999999873
No 177
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=4.2e-37 Score=335.75 Aligned_cols=242 Identities=21% Similarity=0.337 Sum_probs=184.7
Q ss_pred hccccccCeEEEEEEEEcC-CceEEEEEeecccc---------ChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEE
Q 005693 390 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVVV---------GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLV 459 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~---------~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV 459 (682)
.+.||+|+||+||+|.... ++.||+|++..... ....+.+|++++.++ +||||+++++++. .+..++|
T Consensus 140 ~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~-~~~~~lv 217 (419)
T 3i6u_A 140 SKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKL-NHPCIIKIKNFFD-AEDYYIV 217 (419)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHC-CCTTBCCCCEEEE-SSEEEEE
T ss_pred EeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhC-CCCCEeeEEEEEe-cCceEEE
Confidence 5789999999999999754 68899999975421 123588999999999 9999999999975 4568999
Q ss_pred EeeccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCC---CeEEeecCCC
Q 005693 460 YDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDL---DGCISDFGLT 536 (682)
Q Consensus 460 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~---~~kl~DfGla 536 (682)
|||+++|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++ .+||+|||++
T Consensus 218 ~e~~~~g~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~~~~~~~~kl~DFG~a 289 (419)
T 3i6u_A 218 LELMEGGELFDKVVGN-----KRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHS 289 (419)
T ss_dssp EECCTTCBGGGGTSSS-----CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSSSCCEEECCSSTT
T ss_pred EEcCCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEecCCCcceEEEeecccc
Confidence 9999999999998643 34899999999999999999999998 99999999999997554 5999999999
Q ss_pred CCCCCCC---CCCCCCcccCcccccc---CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcccc
Q 005693 537 PLMNVPA---TPSRSAGYRAPEVIET---RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTA 610 (682)
Q Consensus 537 ~~~~~~~---~~~~~~~y~aPE~~~~---~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~ 610 (682)
+...... ...+|+.|+|||++.+ ..++.++|||||||++|||++|+.||....... .+... +......
T Consensus 290 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~--~~~~~----i~~~~~~ 363 (419)
T 3i6u_A 290 KILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV--SLKDQ----ITSGKYN 363 (419)
T ss_dssp TSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSC--CHHHH----HHTTCCC
T ss_pred eecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchH--HHHHH----HhcCCCC
Confidence 8765432 3457899999999853 567889999999999999999999997543222 11111 1111000
Q ss_pred ccchhhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 611 EVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 611 ~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
. . +. .. ......+.+++.+||+.||++|||++|++++
T Consensus 364 ~-~-~~--~~---~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 364 F-I-PE--VW---AEVSEKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp C-C-HH--HH---TTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred C-C-ch--hh---cccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 0 0 00 00 1123456778889999999999999999874
No 178
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=2.1e-37 Score=342.20 Aligned_cols=251 Identities=22% Similarity=0.312 Sum_probs=186.3
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeeccccC---hhhHHHHHHHHHHhcCCCceeceEEEEEecC------ceEEE
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKD------EKLLV 459 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~------~~~lV 459 (682)
.+.||+|+||+||+|... +++.||+|++...... .+.+.+|+.+++.+ +||||+++++++...+ ..++|
T Consensus 67 ~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~~~~~~~lv 145 (464)
T 3ttj_A 67 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV-NHKNIISLLNVFTPQKTLEEFQDVYLV 145 (464)
T ss_dssp EEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCCSTTTCCEEEEE
T ss_pred EEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhC-CCCCCCcEEEEEccCCccccCCeEEEE
Confidence 478999999999999975 4788999999765332 45678899999999 9999999999996553 46999
Q ss_pred EeeccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCC
Q 005693 460 YDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM 539 (682)
Q Consensus 460 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~ 539 (682)
|||+++ +|.+.+.. .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 146 ~E~~~~-~l~~~~~~-------~l~~~~~~~~~~qil~aL~~lH~~~---iiHrDlkp~NIll~~~~~~kl~DFG~a~~~ 214 (464)
T 3ttj_A 146 MELMDA-NLCQVIQM-------ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA 214 (464)
T ss_dssp EECCSE-EHHHHHTS-------CCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCCC---
T ss_pred EeCCCC-CHHHHHhh-------cCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChHhEEEeCCCCEEEEEEEeeeec
Confidence 999976 56666642 2889999999999999999999998 999999999999999999999999999876
Q ss_pred CCC---CCCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHH---------------
Q 005693 540 NVP---ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQ--------------- 601 (682)
Q Consensus 540 ~~~---~~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~--------------- 601 (682)
... ....+|+.|+|||++.+..++.++||||+||++|||++|+.||.+....+. +.....
T Consensus 215 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~--~~~i~~~lg~p~~~~~~~~~~ 292 (464)
T 3ttj_A 215 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ--WNKVIEQLGTPCPEFMKKLQP 292 (464)
T ss_dssp --CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHHHHCSCCHHHHTTSCH
T ss_pred CCCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHhcCCCCHHHHHHcch
Confidence 543 234689999999999999999999999999999999999999986532111 000000
Q ss_pred ---HHhhhccc-ccc-----chhhhcccc--ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 602 ---SVVREEWT-AEV-----FDVELMRFQ--NIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 602 ---~~~~~~~~-~~~-----~d~~l~~~~--~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
........ ... +........ ........+.+++.+||+.||++|||++|++++
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 293 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp HHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred hhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000000 000 000000000 011124567889999999999999999999984
No 179
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=4.9e-39 Score=346.32 Aligned_cols=243 Identities=13% Similarity=0.167 Sum_probs=185.2
Q ss_pred hccccccCeEEEEEEEE-cCCceEEEEEeecccc----ChhhHHHHHHHHHHhc--CCCceeceE-------EEEEecCc
Q 005693 390 AEVLGKGSYGTAYKAVL-EESTTVVVKRLKEVVV----GKRDFEQQMEIVGRVG--QHPNVVPLR-------AYYYSKDE 455 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~----~~~~~~~e~~~l~~l~--~h~niv~l~-------~~~~~~~~ 455 (682)
.+.||+|+||+||+|.. .+++.||||++..... ..+.+.+|++++..+. +||||++++ +++..++.
T Consensus 78 ~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 157 (377)
T 3byv_A 78 GTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQK 157 (377)
T ss_dssp EEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTTS
T ss_pred cceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccCC
Confidence 47899999999999995 4588999999974322 2356888996555443 799999998 77765542
Q ss_pred -----------------eEEEEeeccCCchhHhhccCCCC--CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCC
Q 005693 456 -----------------KLLVYDYFASGSLSTLLHGNRGA--GRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIK 516 (682)
Q Consensus 456 -----------------~~lV~e~~~~g~L~~~l~~~~~~--~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk 516 (682)
.++||||+ +|+|.+++...... ....+++..+..++.||+.||+|||+++ |+|||||
T Consensus 158 ~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrDik 233 (377)
T 3byv_A 158 KKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG---LVHTYLR 233 (377)
T ss_dssp CSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTT---EECSCCC
T ss_pred ccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCC---eecCCCC
Confidence 78999999 68999999753211 1123456888899999999999999998 9999999
Q ss_pred CCCeEecCCCCeEEeecCCCCCCCCCC-CCCCCCcccCccccccC-----------CCCCcchHHHHHHHHHHHHhCCCC
Q 005693 517 ASNVLINQDLDGCISDFGLTPLMNVPA-TPSRSAGYRAPEVIETR-----------KHSHKSDVYSFGVLLLEMLTGKAP 584 (682)
Q Consensus 517 ~~NILl~~~~~~kl~DfGla~~~~~~~-~~~~~~~y~aPE~~~~~-----------~~~~~sDvwS~Gvvl~elltg~~P 584 (682)
|+|||++.++.+||+|||+++...... ...| +.|+|||++.+. .++.++|||||||++|||++|+.|
T Consensus 234 p~NIll~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~P 312 (377)
T 3byv_A 234 PVDIVLDQRGGVFLTGFEHLVRDGARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLP 312 (377)
T ss_dssp GGGEEECTTCCEEECCGGGCEETTCEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCC
T ss_pred HHHEEEcCCCCEEEEechhheecCCcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCCCC
Confidence 999999999999999999998654432 3446 899999999887 899999999999999999999999
Q ss_pred CCCCCCCCCCChhHHHHHHhhhccccccchhhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHHHhh
Q 005693 585 LQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVR--MIEEVR 659 (682)
Q Consensus 585 f~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~--~L~~i~ 659 (682)
|.+....+.... + ....... ...+.+++.+||+.||++|||+.|+++ .++++.
T Consensus 313 f~~~~~~~~~~~---------------~----~~~~~~~---~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~~ 367 (377)
T 3byv_A 313 ITKDAALGGSEW---------------I----FRSCKNI---PQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQLR 367 (377)
T ss_dssp C------CCSGG---------------G----GSSCCCC---CHHHHHHHHHHTCSSGGGCCCHHHHHTSHHHHHHH
T ss_pred Ccccccccchhh---------------h----hhhccCC---CHHHHHHHHHHcCCCchhCCCHHHHhhChHHHHHH
Confidence 976543322110 0 0011122 234667778999999999999999997 455544
No 180
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=1.8e-37 Score=327.95 Aligned_cols=254 Identities=19% Similarity=0.293 Sum_probs=196.7
Q ss_pred hccccccCeEEEEEEEE-c-CCceEEEEEeeccccChhhHHHHHHHHHHhcCCC------ceeceEEEEEecCceEEEEe
Q 005693 390 AEVLGKGSYGTAYKAVL-E-ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHP------NVVPLRAYYYSKDEKLLVYD 461 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~-~-~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~------niv~l~~~~~~~~~~~lV~e 461 (682)
.+.||+|+||.||+|.. . +++.||+|+++......+.+.+|++++..+ +|+ +++++++++...+..++|||
T Consensus 19 ~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l-~~~~~~~~~~i~~~~~~~~~~~~~~lv~e 97 (339)
T 1z57_A 19 VDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHL-NTTDPNSTFRCVQMLEWFEHHGHICIVFE 97 (339)
T ss_dssp EEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHH-HHHCTTCTTCBCCEEEEEEETTEEEEEEE
T ss_pred EEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHh-hhcCCCCceeeEeeecccccCCcEEEEEc
Confidence 46799999999999987 3 578899999976544456788899998887 444 59999999999999999999
Q ss_pred eccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecC-----------------
Q 005693 462 YFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQ----------------- 524 (682)
Q Consensus 462 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~----------------- 524 (682)
|+ +++|.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.
T Consensus 98 ~~-~~~l~~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~ 170 (339)
T 1z57_A 98 LL-GLSTYDFIKENG---FLPFRLDHIRKMAYQICKSVNFLHSNK---LTHTDLKPENILFVQSDYTEAYNPKIKRDERT 170 (339)
T ss_dssp CC-CCBHHHHHHHTT---TCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCCCEEEEEC----CEEEE
T ss_pred CC-CCCHHHHHHhcC---CCCCcHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHEEEeccccccccCCcccccccc
Confidence 99 889999997543 235889999999999999999999998 999999999999987
Q ss_pred --CCCeEEeecCCCCCCCCC-CCCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHH
Q 005693 525 --DLDGCISDFGLTPLMNVP-ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQ 601 (682)
Q Consensus 525 --~~~~kl~DfGla~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~ 601 (682)
++.+||+|||+++..... ....+|+.|+|||++.+..++.++|||||||++|||++|+.||......+.. ....
T Consensus 171 ~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~---~~~~ 247 (339)
T 1z57_A 171 LINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHL---AMME 247 (339)
T ss_dssp ESCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHH---HHHH
T ss_pred ccCCCceEeeCcccccCccccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHH---HHHH
Confidence 678999999999765543 3446889999999999999999999999999999999999999865432211 1111
Q ss_pred HHhh---hcc-----cccc---------------------chhhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 005693 602 SVVR---EEW-----TAEV---------------------FDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVV 652 (682)
Q Consensus 602 ~~~~---~~~-----~~~~---------------------~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl 652 (682)
.... ... .... .................+.+++.+||+.||++|||++|++
T Consensus 248 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell 327 (339)
T 1z57_A 248 RILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREAL 327 (339)
T ss_dssp HHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHT
T ss_pred HHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHh
Confidence 1100 000 0000 0000000111234556788999999999999999999998
Q ss_pred HH
Q 005693 653 RM 654 (682)
Q Consensus 653 ~~ 654 (682)
++
T Consensus 328 ~h 329 (339)
T 1z57_A 328 KH 329 (339)
T ss_dssp TS
T ss_pred cC
Confidence 74
No 181
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=4e-37 Score=325.31 Aligned_cols=256 Identities=24% Similarity=0.360 Sum_probs=192.0
Q ss_pred hccccccCeEEEEEEEEcC-CceEEEEEeeccccC---hhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccC
Q 005693 390 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 465 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~ 465 (682)
.+.||+|+||.||+|+... ++.||+|++...... .+.+.+|++++.++ +||||+++++++.+.+..++||||+++
T Consensus 30 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~ 108 (331)
T 4aaa_A 30 LGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQL-RHENLVNLLEVCKKKKRWYLVFEFVDH 108 (331)
T ss_dssp EEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred eeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhC-CCCCEeeEEEEeecCCEEEEEEecCCc
Confidence 4689999999999999865 788999998765433 34577899999999 899999999999999999999999999
Q ss_pred CchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCC---
Q 005693 466 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP--- 542 (682)
Q Consensus 466 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~--- 542 (682)
++|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 109 ~~l~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 180 (331)
T 4aaa_A 109 TILDDLELFP-----NGLDYQVVQKYLFQIINGIGFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEV 180 (331)
T ss_dssp EHHHHHHHST-----TCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCTTC---------
T ss_pred chHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHHHCC---EEccCcChheEEEcCCCcEEEEeCCCceeecCCccc
Confidence 9999887643 23899999999999999999999998 999999999999999999999999999765432
Q ss_pred -CCCCCCCcccCccccccC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCC-h--------hHHHHHHhhhccccc
Q 005693 543 -ATPSRSAGYRAPEVIETR-KHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVD-L--------PRWVQSVVREEWTAE 611 (682)
Q Consensus 543 -~~~~~~~~y~aPE~~~~~-~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~-l--------~~~~~~~~~~~~~~~ 611 (682)
....+++.|+|||++.+. .++.++|||||||++|||++|+.||......+... + +.+............
T Consensus 181 ~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (331)
T 4aaa_A 181 YDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAG 260 (331)
T ss_dssp ---CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTT
T ss_pred cCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhcccccc
Confidence 234578899999999775 68999999999999999999999997654221100 0 000000000000000
Q ss_pred cchhhhccccCh----HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 612 VFDVELMRFQNI----EEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 612 ~~d~~l~~~~~~----~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
...+........ ......+.+++.+||+.||++|||++|++++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 261 VRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp CCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 000000000000 1223457788889999999999999999874
No 182
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=4e-37 Score=318.78 Aligned_cols=242 Identities=24% Similarity=0.384 Sum_probs=190.6
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeeccccC---hhhHHHHHHHHHHhcCCCceeceEEEEEe----cCceEEEEe
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYS----KDEKLLVYD 461 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~----~~~~~lV~e 461 (682)
.+.||+|+||.||+|... ++..||+|++...... .+.+.+|+.++.++ +||||+++++++.. ....++|||
T Consensus 31 ~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~lv~e 109 (290)
T 1t4h_A 31 DIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGL-QHPNIVRFYDSWESTVKGKKCIVLVTE 109 (290)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEEESSSCEEEEEEEE
T ss_pred eeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhC-CCCCeeeeeeeeccccCCCceEEEEEE
Confidence 457999999999999975 4677999998765433 34688899999999 89999999999875 345799999
Q ss_pred eccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEec-CCCCeEEeecCCCCCCC
Q 005693 462 YFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLIN-QDLDGCISDFGLTPLMN 540 (682)
Q Consensus 462 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~-~~~~~kl~DfGla~~~~ 540 (682)
|+++|+|.+++... ..+++..+..++.|++.||+|||+.+ ++|+||||||+||+++ +++.+||+|||++....
T Consensus 110 ~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~ 183 (290)
T 1t4h_A 110 LMTSGTLKTYLKRF-----KVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp CCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred ecCCCCHHHHHHHc-----cCCCHHHHHHHHHHHHHHHHHHHcCC-CCEEECCCCHHHEEEECCCCCEEEeeCCCccccc
Confidence 99999999999743 34899999999999999999999975 4599999999999998 78999999999997654
Q ss_pred CCC--CCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhc
Q 005693 541 VPA--TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELM 618 (682)
Q Consensus 541 ~~~--~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 618 (682)
... ...+++.|+|||++.+ .++.++||||||+++|+|++|+.||..... ........... ......+
T Consensus 184 ~~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~-----~~~~~~~~~~~-~~~~~~~---- 252 (290)
T 1t4h_A 184 ASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQN-----AAQIYRRVTSG-VKPASFD---- 252 (290)
T ss_dssp TTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSS-----HHHHHHHHTTT-CCCGGGG----
T ss_pred ccccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCc-----HHHHHHHHhcc-CCccccC----
Confidence 432 3457899999998864 589999999999999999999999975331 11112211111 1111111
Q ss_pred cccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 619 RFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 619 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
......+.+++.+||+.||++|||++|++++
T Consensus 253 -----~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 253 -----KVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp -----GCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred -----CCCCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 0112356778889999999999999999874
No 183
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=7.4e-37 Score=319.09 Aligned_cols=242 Identities=20% Similarity=0.337 Sum_probs=194.0
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeecccc-ChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccCCc
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV-GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGS 467 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~ 467 (682)
.+.||+|+||.||+++.. +++.||+|+++.... ..+.+.+|++++.++ +||||+++++++.+.+..++||||+++|+
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 92 (304)
T 2jam_A 14 MEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKI-KHENIVTLEDIYESTTHYYLVMQLVSGGE 92 (304)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred eeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhC-CCCCeeehhhhcccCCEEEEEEEcCCCcc
Confidence 578999999999999976 578899999976532 345688999999999 89999999999999999999999999999
Q ss_pred hhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEe---cCCCCeEEeecCCCCCCCCCC-
Q 005693 468 LSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLI---NQDLDGCISDFGLTPLMNVPA- 543 (682)
Q Consensus 468 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl---~~~~~~kl~DfGla~~~~~~~- 543 (682)
|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||++ ++++.+||+|||++.......
T Consensus 93 L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~ 164 (304)
T 2jam_A 93 LFDRILER-----GVYTEKDASLVIQQVLSAVKYLHENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIM 164 (304)
T ss_dssp HHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBTT
T ss_pred HHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCcc
Confidence 99998643 24899999999999999999999998 9999999999999 788999999999987654332
Q ss_pred -CCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhccccC
Q 005693 544 -TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQN 622 (682)
Q Consensus 544 -~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~ 622 (682)
...+++.|+|||++.+..++.++||||||+++|||++|+.||...... .....+....... .. ...
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------~~~~~i~~~~~~~---~~--~~~-- 231 (304)
T 2jam_A 165 STACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETES------KLFEKIKEGYYEF---ES--PFW-- 231 (304)
T ss_dssp HHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHH------HHHHHHHHCCCCC---CT--TTT--
T ss_pred ccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH------HHHHHHHcCCCCC---Cc--ccc--
Confidence 123788999999999999999999999999999999999999754321 1122221111100 00 001
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 623 IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 623 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
......+.+++.+|++.||++|||++|++++
T Consensus 232 -~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (304)
T 2jam_A 232 -DDISESAKDFICHLLEKDPNERYTCEKALSH 262 (304)
T ss_dssp -TTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred -ccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 1223456778889999999999999999984
No 184
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=3.5e-37 Score=335.14 Aligned_cols=202 Identities=23% Similarity=0.413 Sum_probs=155.8
Q ss_pred HHHHHHhhccccccCeEEEEEEEEc---CCceEEEEEeeccccChhhHHHHHHHHHHhcCCCceeceEEEEEe--cCceE
Q 005693 383 EDLLRASAEVLGKGSYGTAYKAVLE---ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYS--KDEKL 457 (682)
Q Consensus 383 ~~l~~~~~~~lG~G~fg~Vy~~~~~---~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~--~~~~~ 457 (682)
++.....+++||+|+||+||+|+.. +++.||+|++..... ...+.+|++++.++ +||||+++++++.. +...+
T Consensus 19 ~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~~~ 96 (405)
T 3rgf_A 19 EDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI-SMSACREIALLREL-KHPNVISLQKVFLSHADRKVW 96 (405)
T ss_dssp HHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC-CHHHHHHHHHHHHC-CCTTBCCCCEEEEETTTTEEE
T ss_pred hhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC-CHHHHHHHHHHHhc-CCCCeeeEeeEEecCCCCeEE
Confidence 3333333668999999999999976 467899999975433 45688999999999 89999999999965 56789
Q ss_pred EEEeeccCCchhHhhccCC----CCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEe----cCCCCeE
Q 005693 458 LVYDYFASGSLSTLLHGNR----GAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLI----NQDLDGC 529 (682)
Q Consensus 458 lV~e~~~~g~L~~~l~~~~----~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl----~~~~~~k 529 (682)
+||||+.+ +|.+++.... ......+++..++.++.||+.||+|||+.+ |+||||||+|||+ +.++.+|
T Consensus 97 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~k 172 (405)
T 3rgf_A 97 LLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVK 172 (405)
T ss_dssp EEEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECCSSTTTTCEE
T ss_pred EEEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---EeCCCcCHHHeEEecCCCCCCcEE
Confidence 99999974 8888775321 112234899999999999999999999998 9999999999999 7789999
Q ss_pred EeecCCCCCCCCC-------CCCCCCCcccCccccccC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCC
Q 005693 530 ISDFGLTPLMNVP-------ATPSRSAGYRAPEVIETR-KHSHKSDVYSFGVLLLEMLTGKAPLQSPTR 590 (682)
Q Consensus 530 l~DfGla~~~~~~-------~~~~~~~~y~aPE~~~~~-~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~ 590 (682)
|+|||+++..... ....+|+.|+|||++.+. .++.++|||||||++|||++|+.||.+...
T Consensus 173 l~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~ 241 (405)
T 3rgf_A 173 IADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQE 241 (405)
T ss_dssp ECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC-
T ss_pred EEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccc
Confidence 9999999876432 234578999999999874 589999999999999999999999986543
No 185
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1e-37 Score=334.64 Aligned_cols=251 Identities=21% Similarity=0.350 Sum_probs=188.2
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeeccccC---hhhHHHHHHHHHHhcCCCceeceEEEEEecC------ceEEE
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKD------EKLLV 459 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~------~~~lV 459 (682)
.+.||+|+||.||+|... +++.||+|++...... .+.+.+|++++..+ +||||+++++++.... ..++|
T Consensus 30 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~~~~~~~lv 108 (367)
T 1cm8_A 30 LQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHM-RHENVIGLLDVFTPDETLDDFTDFYLV 108 (367)
T ss_dssp EEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHC-CBTTBCCCSEEECSCSSTTTCCCCEEE
T ss_pred eEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhC-CCcCCCCceeeEecCCccccCceEEEE
Confidence 467999999999999975 5788999999654332 35678899999999 8999999999997653 45999
Q ss_pred EeeccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCC
Q 005693 460 YDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM 539 (682)
Q Consensus 460 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~ 539 (682)
|||+ +++|.+++... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++..
T Consensus 109 ~e~~-~~~L~~~~~~~------~l~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 178 (367)
T 1cm8_A 109 MPFM-GTDLGKLMKHE------KLGEDRIQFLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLARQA 178 (367)
T ss_dssp EECC-SEEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EecC-CCCHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCHHHEEEcCCCCEEEEeeeccccc
Confidence 9999 88999999742 3899999999999999999999998 999999999999999999999999999876
Q ss_pred CCCC-CCCCCCcccCcccccc-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhh------ccccc
Q 005693 540 NVPA-TPSRSAGYRAPEVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVRE------EWTAE 611 (682)
Q Consensus 540 ~~~~-~~~~~~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~------~~~~~ 611 (682)
.... ...+|+.|+|||++.+ ..++.++||||+||++|||++|+.||.+....+ ....+... .....
T Consensus 179 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~------~l~~i~~~~g~~~~~~~~~ 252 (367)
T 1cm8_A 179 DSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLD------QLKEIMKVTGTPPAEFVQR 252 (367)
T ss_dssp CSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHHHCCCCHHHHHT
T ss_pred ccccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHHHhcCCCCHHHHHH
Confidence 5433 3467899999999877 678999999999999999999999998653211 11111100 00000
Q ss_pred c---------------chhhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHHhh
Q 005693 612 V---------------FDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM--IEEVR 659 (682)
Q Consensus 612 ~---------------~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~--L~~i~ 659 (682)
+ ....+. .........+.+++.+|++.||++|||++|++++ ++++.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~~ 315 (367)
T 1cm8_A 253 LQSDEAKNYMKGLPELEKKDFA--SILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH 315 (367)
T ss_dssp CSCHHHHHHHHHSCCCCCCCGG--GTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred hhhHHHHHHHHhCCCCCCCCHH--HHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhhc
Confidence 0 000000 0011223456778889999999999999999984 44443
No 186
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.6e-37 Score=327.63 Aligned_cols=254 Identities=24% Similarity=0.408 Sum_probs=197.9
Q ss_pred hccccccCeEEEEEEEE-----cCCceEEEEEeecccc-ChhhHHHHHHHHHHhcCCCceeceEEEEEecC--ceEEEEe
Q 005693 390 AEVLGKGSYGTAYKAVL-----EESTTVVVKRLKEVVV-GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKD--EKLLVYD 461 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~-----~~~~~vavK~l~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~--~~~lV~e 461 (682)
.+.||+|+||.||++++ .+++.||+|++..... ..+.+.+|++++.++ +||||+++++++...+ ..++|||
T Consensus 46 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~lv~e 124 (326)
T 2w1i_A 46 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKYKGVCYSAGRRNLKLIME 124 (326)
T ss_dssp EEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTC-CCTTBCCEEEEECC----CCEEEEC
T ss_pred eeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhC-CCCCeeeEEEEEEecCCCceEEEEE
Confidence 57899999999999985 3578899999876432 245788999999999 8999999999987644 6799999
Q ss_pred eccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCC
Q 005693 462 YFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV 541 (682)
Q Consensus 462 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~ 541 (682)
|+++|+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.....
T Consensus 125 ~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~ 197 (326)
T 2w1i_A 125 YLPYGSLRDYLQKHK----ERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQ 197 (326)
T ss_dssp CCTTCBHHHHHHHST----TSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTCEECCS
T ss_pred CCCCCCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHhCC---EeccCCCcceEEEcCCCcEEEecCcchhhccc
Confidence 999999999997543 34899999999999999999999998 99999999999999999999999999976644
Q ss_pred CC-------CCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCC--------CCCCC-hhHHHHHHhh
Q 005693 542 PA-------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTR--------DDMVD-LPRWVQSVVR 605 (682)
Q Consensus 542 ~~-------~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~--------~~~~~-l~~~~~~~~~ 605 (682)
.. ...++..|+|||.+.+..++.++||||||+++|||+||..||..... ..... ..........
T Consensus 198 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (326)
T 2w1i_A 198 DKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLK 277 (326)
T ss_dssp SCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHH
T ss_pred cccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhh
Confidence 32 22356679999999988899999999999999999999999863210 00000 0000111111
Q ss_pred hccccccchhhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 005693 606 EEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQS 661 (682)
Q Consensus 606 ~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~ 661 (682)
... ...........+.+++.+||+.||++|||++|+++.|+++++.
T Consensus 278 ~~~----------~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~ 323 (326)
T 2w1i_A 278 NNG----------RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ 323 (326)
T ss_dssp TTC----------CCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cCC----------CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 110 0011122334577788899999999999999999999998764
No 187
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=8.3e-37 Score=327.94 Aligned_cols=258 Identities=19% Similarity=0.278 Sum_probs=194.5
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeeccccChhhHHHHHHHHHHhc----------CCCceeceEEEEEecC----
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVG----------QHPNVVPLRAYYYSKD---- 454 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~----------~h~niv~l~~~~~~~~---- 454 (682)
.+.||+|+||+||+|+.. +++.||+|++.......+.+.+|++++.++. .|+||+++++++...+
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 103 (373)
T 1q8y_A 24 VRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGV 103 (373)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTEE
T ss_pred EEeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhccCCCCc
Confidence 478999999999999974 5788999999765445567888999988873 2899999999998654
Q ss_pred ceEEEEeeccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCcEecCCCCCCeEec------CCCC
Q 005693 455 EKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSM-GGPKFTHGNIKASNVLIN------QDLD 527 (682)
Q Consensus 455 ~~~lV~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~-~~~~ivHrDLk~~NILl~------~~~~ 527 (682)
..++||||+ +++|.+++.... ...+++..+..++.||+.||+|||++ + |+||||||+|||++ ..+.
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~~---~~~~~~~~~~~i~~qi~~aL~~lH~~~~---ivH~Dikp~NIll~~~~~~~~~~~ 176 (373)
T 1q8y_A 104 HVVMVFEVL-GENLLALIKKYE---HRGIPLIYVKQISKQLLLGLDYMHRRCG---IIHTDIKPENVLMEIVDSPENLIQ 176 (373)
T ss_dssp EEEEEECCC-CEEHHHHHHHTT---TSCCCHHHHHHHHHHHHHHHHHHHHTTC---EECSCCSGGGEEEEEEETTTTEEE
T ss_pred eEEEEEecC-CCCHHHHHHHhh---ccCCcHHHHHHHHHHHHHHHHHHHhcCC---EEecCCChHHeEEeccCCCcCcce
Confidence 678999999 889999997543 23489999999999999999999998 8 99999999999994 4457
Q ss_pred eEEeecCCCCCCCCC-CCCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhh
Q 005693 528 GCISDFGLTPLMNVP-ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVRE 606 (682)
Q Consensus 528 ~kl~DfGla~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~ 606 (682)
+||+|||++...... ....+|+.|+|||++.+..++.++|||||||++|||++|+.||.................+...
T Consensus 177 ~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 256 (373)
T 1q8y_A 177 IKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIEL 256 (373)
T ss_dssp EEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHH
T ss_pred EEEcccccccccCCCCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHh
Confidence 999999999766543 3446889999999999999999999999999999999999999865433222111111111100
Q ss_pred ------------ccc----------cccc--------hhhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 607 ------------EWT----------AEVF--------DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 607 ------------~~~----------~~~~--------d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
.+. ..+. +...............+.+++.+||+.||++|||++|++++
T Consensus 257 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 334 (373)
T 1q8y_A 257 LGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNH 334 (373)
T ss_dssp HCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTC
T ss_pred cCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhC
Confidence 000 0000 00001112234567788899999999999999999999984
No 188
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=2.4e-37 Score=329.71 Aligned_cols=253 Identities=21% Similarity=0.282 Sum_probs=190.8
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeecccc---ChhhHHHHHHHHHHhcCCCceeceEEEEEec--------CceE
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV---GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSK--------DEKL 457 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~--------~~~~ 457 (682)
.+.||+|+||.||+|+.. +++.||+|++..... ....+.+|++++..+ +||||+++++++... +..+
T Consensus 22 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~~~~ 100 (351)
T 3mi9_A 22 LAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLL-KHENVVNLIEICRTKASPYNRCKGSIY 100 (351)
T ss_dssp EEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHC-CCTTBCCEEEEEEEC--------CEEE
T ss_pred EEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhc-cCCCcccHhheeeccccccccCCceEE
Confidence 478999999999999984 578999999865432 235678999999999 899999999999874 4679
Q ss_pred EEEeeccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCC
Q 005693 458 LVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTP 537 (682)
Q Consensus 458 lV~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~ 537 (682)
+||||+++ +|.+.+.... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 101 lv~e~~~~-~l~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 172 (351)
T 3mi9_A 101 LVFDFCEH-DLAGLLSNVL----VKFTLSEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLAR 172 (351)
T ss_dssp EEEECCSE-EHHHHHHCTT----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EEEeccCC-CHHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCHHHEEEcCCCCEEEccchhcc
Confidence 99999975 7877776432 34899999999999999999999998 9999999999999999999999999997
Q ss_pred CCCCC--------CCCCCCCcccCcccccc-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhh--
Q 005693 538 LMNVP--------ATPSRSAGYRAPEVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVRE-- 606 (682)
Q Consensus 538 ~~~~~--------~~~~~~~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~-- 606 (682)
..... ....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+.. .........
T Consensus 173 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~---~~i~~~~~~~~ 249 (351)
T 3mi9_A 173 AFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQL---ALISQLCGSIT 249 (351)
T ss_dssp ECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH---HHHHHHHCCCC
T ss_pred cccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHH---HHHHHHhCCCC
Confidence 65321 22346888999999876 45799999999999999999999999865422111 111111100
Q ss_pred -ccccccchhh--------hccccChHHH------HHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 607 -EWTAEVFDVE--------LMRFQNIEEE------MVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 607 -~~~~~~~d~~--------l~~~~~~~~~------~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
.......+.. ........+. ...+.+++.+||+.||++|||++|++++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 250 PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp TTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 0000000000 0001111121 2346788899999999999999999985
No 189
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=2.9e-37 Score=355.75 Aligned_cols=238 Identities=24% Similarity=0.306 Sum_probs=195.3
Q ss_pred hccccccCeEEEEEEEEcC-CceEEEEEeeccc----cChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeecc
Q 005693 390 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 464 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~ 464 (682)
.+.||+|+||.||+|+... ++.||||+++... ...+.+..|.+++..+.+|+||+++++++.+.+..|+||||++
T Consensus 346 ~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV~E~~~ 425 (674)
T 3pfq_A 346 LMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVN 425 (674)
T ss_dssp EEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEEEECCC
T ss_pred EEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEEEeCcC
Confidence 4689999999999999764 6779999997542 2345677888898888789999999999999999999999999
Q ss_pred CCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCC---
Q 005693 465 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV--- 541 (682)
Q Consensus 465 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~--- 541 (682)
+|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 426 gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~g---IiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~ 497 (674)
T 3pfq_A 426 GGDLMYHIQQV-----GRFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV 497 (674)
T ss_dssp SCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTS---EECCCCCSTTEEECSSSCEEECCCTTCEECCCTTC
T ss_pred CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---eEeccCChhhEEEcCCCcEEEeecceeeccccCCc
Confidence 99999999753 24899999999999999999999998 99999999999999999999999999975322
Q ss_pred -CCCCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhccc
Q 005693 542 -PATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 620 (682)
Q Consensus 542 -~~~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 620 (682)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||.+... ......+..... ...
T Consensus 498 ~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~------~~~~~~i~~~~~---------~~p 562 (674)
T 3pfq_A 498 TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE------DELFQSIMEHNV---------AYP 562 (674)
T ss_dssp CBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHSSCC---------CCC
T ss_pred ccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCH------HHHHHHHHhCCC---------CCC
Confidence 2345689999999999999999999999999999999999999986432 122222222211 011
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCCCH-----HHHHH
Q 005693 621 QNIEEEMVQMLQIGMACVAKVPDMRPNM-----DEVVR 653 (682)
Q Consensus 621 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~-----~evl~ 653 (682)
.. ....+.+++.+||+.||++||++ +||++
T Consensus 563 ~~---~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 563 KS---MSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp TT---SCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred cc---CCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 12 22346677779999999999997 77765
No 190
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=1.1e-36 Score=339.23 Aligned_cols=241 Identities=21% Similarity=0.340 Sum_probs=194.9
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeeccc---cChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccC
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV---VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 465 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~ 465 (682)
.+.||+|+||+||+|... +++.||+|++.... .....+.+|++++.++ +||||+++++++.+....++||||+++
T Consensus 27 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~~~~ 105 (486)
T 3mwu_A 27 VCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL-DHPNIMKLFEILEDSSSFYIVGELYTG 105 (486)
T ss_dssp EEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred eEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhC-CCCCcCeEEEEEEcCCEEEEEEEcCCC
Confidence 578999999999999976 57889999996542 2456789999999999 999999999999999999999999999
Q ss_pred CchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEec---CCCCeEEeecCCCCCCCCC
Q 005693 466 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLIN---QDLDGCISDFGLTPLMNVP 542 (682)
Q Consensus 466 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~---~~~~~kl~DfGla~~~~~~ 542 (682)
|+|.+.+... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++ .++.+||+|||+++.....
T Consensus 106 ~~L~~~~~~~-----~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~ 177 (486)
T 3mwu_A 106 GELFDEIIKR-----KRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN 177 (486)
T ss_dssp CBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC
T ss_pred CcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCCCCCCEEEEECCcCeECCCC
Confidence 9999988643 24899999999999999999999998 99999999999995 4567999999999876543
Q ss_pred C---CCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhcc
Q 005693 543 A---TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMR 619 (682)
Q Consensus 543 ~---~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 619 (682)
. ...+|+.|+|||++.+ .++.++||||+||++|+|++|+.||.+.... .....+........ ...
T Consensus 178 ~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~------~~~~~i~~~~~~~~-----~~~ 245 (486)
T 3mwu_A 178 TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY------DILKRVETGKYAFD-----LPQ 245 (486)
T ss_dssp ----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHTCCCSC-----SGG
T ss_pred CccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHhCCCCCC-----Ccc
Confidence 2 3458899999999876 5899999999999999999999999764321 12222222211110 011
Q ss_pred ccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 620 FQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 620 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
.. .....+.+++.+||+.||++|||++|++++
T Consensus 246 ~~---~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 246 WR---TISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp GG---GSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred cC---CCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 11 122345677789999999999999999985
No 191
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.4e-37 Score=323.94 Aligned_cols=243 Identities=23% Similarity=0.396 Sum_probs=190.6
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeeccccChhhHHHHHHHHHHhcCCCceeceEEEEEe------cCceEEEEee
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYS------KDEKLLVYDY 462 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~------~~~~~lV~e~ 462 (682)
.+.||+|+||.||+|... +++.||+|++.......+.+.+|+.++.++.+||||+++++++.. .+..++||||
T Consensus 29 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~ 108 (326)
T 2x7f_A 29 VELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEF 108 (326)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEEEEEC
T ss_pred EEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEEEEEEc
Confidence 478999999999999974 578899999987666677899999999999889999999999987 4578999999
Q ss_pred ccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCC
Q 005693 463 FASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP 542 (682)
Q Consensus 463 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~ 542 (682)
+++|+|.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 109 ~~~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 182 (326)
T 2x7f_A 109 CGAGSVTDLIKNTK---GNTLKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRT 182 (326)
T ss_dssp CTTEEHHHHHHHSG---GGCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTCCEEECCCTTTC-----
T ss_pred CCCCcHHHHHHhcc---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCcHHHEEEcCCCCEEEeeCcCceecCcC
Confidence 99999999997543 234899999999999999999999998 999999999999999999999999998765432
Q ss_pred ----CCCCCCCcccCccccc-----cCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccc
Q 005693 543 ----ATPSRSAGYRAPEVIE-----TRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 613 (682)
Q Consensus 543 ----~~~~~~~~y~aPE~~~-----~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 613 (682)
....+++.|+|||++. +..++.++||||||+++|||++|+.||...... .......... ....
T Consensus 183 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~~~~~~~~~-~~~~- 254 (326)
T 2x7f_A 183 VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM------RALFLIPRNP-APRL- 254 (326)
T ss_dssp --------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHH------HHHHHHHHSC-CCCC-
T ss_pred ccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHH------HHHHHhhcCc-cccC-
Confidence 2345788999999987 566899999999999999999999999754311 1111111111 0000
Q ss_pred hhhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 614 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 614 d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
..... ...+.+++.+||+.||++||+++|++++
T Consensus 255 -----~~~~~---~~~l~~li~~~l~~dp~~Rps~~~ll~h 287 (326)
T 2x7f_A 255 -----KSKKW---SKKFQSFIESCLVKNHSQRPATEQLMKH 287 (326)
T ss_dssp -----SCSCS---CHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred -----Ccccc---CHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 01111 2356677789999999999999999883
No 192
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=4.2e-37 Score=339.99 Aligned_cols=181 Identities=28% Similarity=0.440 Sum_probs=146.1
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeeccccC---hhhHHHHHHHHHHhcCCCceeceEEEEEec-----CceEEEE
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSK-----DEKLLVY 460 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~-----~~~~lV~ 460 (682)
.+.||+|+||+||+|... +++.||||++...... .+.+.+|++++.++ +||||+++++++... ...|+||
T Consensus 58 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~~lv~ 136 (458)
T 3rp9_A 58 RHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRL-NHDHVVKVLDIVIPKDVEKFDELYVVL 136 (458)
T ss_dssp CCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHC-CCTTBCCEEEECCCSCTTTCCCEEEEE
T ss_pred eeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhC-CCCCCCceEEEEecCCcccCceEEEEE
Confidence 478999999999999965 5788999999764332 35688999999999 999999999999543 4689999
Q ss_pred eeccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCC
Q 005693 461 DYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN 540 (682)
Q Consensus 461 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~ 540 (682)
||+ +|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 137 e~~-~~~L~~~~~~~-----~~l~~~~~~~~~~qi~~aL~~LH~~~---iiHrDlKp~NILl~~~~~~kl~DFGla~~~~ 207 (458)
T 3rp9_A 137 EIA-DSDFKKLFRTP-----VYLTELHIKTLLYNLLVGVKYVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLARTVD 207 (458)
T ss_dssp CCC-SEEHHHHHHSS-----CCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTCCEEECCCTTCBCTT
T ss_pred ecc-ccchhhhcccC-----CCCCHHHHHHHHHHHHHHHHHHHhCC---cCCCCCChhhEEECCCCCEeecccccchhcc
Confidence 998 56999999743 34899999999999999999999998 9999999999999999999999999998754
Q ss_pred CC-------------------------------CCCCCCCcccCcccc-ccCCCCCcchHHHHHHHHHHHHh
Q 005693 541 VP-------------------------------ATPSRSAGYRAPEVI-ETRKHSHKSDVYSFGVLLLEMLT 580 (682)
Q Consensus 541 ~~-------------------------------~~~~~~~~y~aPE~~-~~~~~~~~sDvwS~Gvvl~ellt 580 (682)
.. ....+|+.|+|||++ ....++.++|||||||++|||++
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~ellt 279 (458)
T 3rp9_A 208 YPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN 279 (458)
T ss_dssp SCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHT
T ss_pred CccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHH
Confidence 22 123468889999986 55679999999999999999999
No 193
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=3.1e-37 Score=329.94 Aligned_cols=191 Identities=21% Similarity=0.381 Sum_probs=166.6
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeecccc--ChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccCC
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 466 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g 466 (682)
.+.||+|+||+||+|... ++..||+|++..... ..+.+.+|+.++..+ +||||+++++++..++..++||||+++|
T Consensus 38 ~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 116 (360)
T 3eqc_A 38 ISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC-NSPYIVGFYGAFYSDGEISICMEHMDGG 116 (360)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGC-CCTTBCCEEEEEEETTEEEEEECCCTTC
T ss_pred eeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHC-CCCCEEEEeEEEEECCEEEEEEECCCCC
Confidence 468999999999999976 577899999875432 235688999999998 8999999999999999999999999999
Q ss_pred chhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCC--CCC
Q 005693 467 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSM-GGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN--VPA 543 (682)
Q Consensus 467 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~-~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~--~~~ 543 (682)
+|.+++.... .+++..+..++.|++.||+|||+. + |+||||||+||+++.++.+||+|||++.... ...
T Consensus 117 ~L~~~l~~~~-----~~~~~~~~~i~~~i~~~l~~lh~~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 188 (360)
T 3eqc_A 117 SLDQVLKKAG-----RIPEQILGKVSIAVIKGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN 188 (360)
T ss_dssp BHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHHHC---CCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC--
T ss_pred CHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHhCC---EEcCCccHHHEEECCCCCEEEEECCCCccccccccc
Confidence 9999997532 489999999999999999999985 7 9999999999999999999999999986432 223
Q ss_pred CCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCC
Q 005693 544 TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPT 589 (682)
Q Consensus 544 ~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~ 589 (682)
...+++.|+|||++.+..++.++||||||+++|||++|+.||....
T Consensus 189 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 234 (360)
T 3eqc_A 189 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPD 234 (360)
T ss_dssp --CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCC
T ss_pred CCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 4468899999999999999999999999999999999999997543
No 194
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=1.2e-36 Score=340.31 Aligned_cols=241 Identities=22% Similarity=0.358 Sum_probs=191.9
Q ss_pred hccccccCeEEEEEEEEcC-CceEEEEEeeccc--------------cChhhHHHHHHHHHHhcCCCceeceEEEEEecC
Q 005693 390 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVV--------------VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKD 454 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~--------------~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~ 454 (682)
.+.||+|+||+||+|.... ++.||+|+++... ...+.+.+|+.++.++ +||||+++++++.+..
T Consensus 41 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~ 119 (504)
T 3q5i_A 41 VRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL-DHPNIIKLFDVFEDKK 119 (504)
T ss_dssp EEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTC-CCTTBCCEEEEEECSS
T ss_pred EeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEcCC
Confidence 4789999999999999764 6789999997543 1245688999999999 8999999999999999
Q ss_pred ceEEEEeeccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCC---CeEEe
Q 005693 455 EKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDL---DGCIS 531 (682)
Q Consensus 455 ~~~lV~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~---~~kl~ 531 (682)
..++||||+++|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++ .+||+
T Consensus 120 ~~~lv~e~~~gg~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~ 191 (504)
T 3q5i_A 120 YFYLVTEFYEGGELFEQIINR-----HKFDECDAANIMKQILSGICYLHKHN---IVHRDIKPENILLENKNSLLNIKIV 191 (504)
T ss_dssp EEEEEEECCTTCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESSTTCCSSEEEC
T ss_pred EEEEEEecCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCcHHHEEEecCCCCccEEEE
Confidence 999999999999999998643 24899999999999999999999998 99999999999999776 69999
Q ss_pred ecCCCCCCCCC---CCCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcc
Q 005693 532 DFGLTPLMNVP---ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEW 608 (682)
Q Consensus 532 DfGla~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~ 608 (682)
|||++...... ....+|+.|+|||++. ..++.++||||+||++|+|++|..||.+.... .....+.....
T Consensus 192 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~------~~~~~i~~~~~ 264 (504)
T 3q5i_A 192 DFGLSSFFSKDYKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQ------DIIKKVEKGKY 264 (504)
T ss_dssp CCTTCEECCTTSCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHCCC
T ss_pred ECCCCEEcCCCCccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHcCCC
Confidence 99999776543 2446899999999987 46899999999999999999999999864321 12222222111
Q ss_pred ccccchhhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 609 TAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 609 ~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
.. + ....... ...+.+++.+|++.||++|||++|++++
T Consensus 265 ~~---~--~~~~~~~---s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 265 YF---D--FNDWKNI---SDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp CC---C--HHHHTTS---CHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CC---C--ccccCCC---CHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 10 0 0011112 2346677789999999999999999984
No 195
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=1.3e-37 Score=322.27 Aligned_cols=250 Identities=25% Similarity=0.360 Sum_probs=188.3
Q ss_pred hccccccCeEEEEEEEEcC--Cc--eEEEEEeecccc----ChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEe
Q 005693 390 AEVLGKGSYGTAYKAVLEE--ST--TVVVKRLKEVVV----GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYD 461 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~--~~--~vavK~l~~~~~----~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e 461 (682)
.+.||+|+||+||+|.+.. ++ .||+|+++.... ..+.+.+|++++.++ +||||+++++++..+. .++|||
T Consensus 23 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~-~~~v~e 100 (291)
T 1u46_A 23 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-DHRNLIRLYGVVLTPP-MKMVTE 100 (291)
T ss_dssp EEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHC-CCTTBCCEEEEECSSS-CEEEEE
T ss_pred eeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhC-CCCCcccEEEEEccCC-ceeeEe
Confidence 4689999999999998642 22 589999875422 235688999999999 8999999999997654 889999
Q ss_pred eccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCC
Q 005693 462 YFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV 541 (682)
Q Consensus 462 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~ 541 (682)
|+++|+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.....
T Consensus 101 ~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 173 (291)
T 1u46_A 101 LAPLGSLLDRLRKHQ----GHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQ 173 (291)
T ss_dssp CCTTCBHHHHHHHHG----GGSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTCEECCC
T ss_pred cccCCCHHHHHHhcc----CCcCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEEcCCCCEEEccccccccccc
Confidence 999999999997532 34899999999999999999999998 99999999999999999999999999876643
Q ss_pred CC-------CCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccc
Q 005693 542 PA-------TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 613 (682)
Q Consensus 542 ~~-------~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-g~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 613 (682)
.. ...++..|+|||++.+..++.++||||||+++|||++ |+.||..... ..............
T Consensus 174 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~------~~~~~~~~~~~~~~--- 244 (291)
T 1u46_A 174 NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG------SQILHKIDKEGERL--- 244 (291)
T ss_dssp -CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCH------HHHHHHHHTSCCCC---
T ss_pred cccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCH------HHHHHHHHccCCCC---
Confidence 32 2235668999999998889999999999999999999 9999975432 11222222111110
Q ss_pred hhhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCCC
Q 005693 614 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSE 664 (682)
Q Consensus 614 d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~~~~ 664 (682)
.........+.+++.+||+.||++|||++++++.|+++......
T Consensus 245 -------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~ 288 (291)
T 1u46_A 245 -------PRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTDMR 288 (291)
T ss_dssp -------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-----
T ss_pred -------CCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCccchh
Confidence 01112334577788899999999999999999999998765543
No 196
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=1.2e-36 Score=315.76 Aligned_cols=239 Identities=21% Similarity=0.345 Sum_probs=194.9
Q ss_pred hccccccCeEEEEEEEEcC-CceEEEEEeecccc----ChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeecc
Q 005693 390 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVVV----GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 464 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~----~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~ 464 (682)
.+.||+|+||.||++...+ ++.+|+|++..... ..+.+.+|+.+++.+ +||||+++++++.+++..++||||++
T Consensus 20 ~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~ 98 (294)
T 2rku_A 20 GRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVVGFHGFFEDNDFVFVVLELCR 98 (294)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred EEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhC-CCCCEeeeeeeeccCCEEEEEEecCC
Confidence 4789999999999999864 67789999875532 235678899999999 99999999999999999999999999
Q ss_pred CCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCC--
Q 005693 465 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP-- 542 (682)
Q Consensus 465 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~-- 542 (682)
+++|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 99 ~~~L~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 170 (294)
T 2rku_A 99 RRSLLELHKRR-----KALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE 170 (294)
T ss_dssp TCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECCSTTC
T ss_pred CCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEcCCCCEEEEeccCceecccCcc
Confidence 99999998643 24899999999999999999999998 999999999999999999999999998765422
Q ss_pred --CCCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhccc
Q 005693 543 --ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 620 (682)
Q Consensus 543 --~~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 620 (682)
....+++.|+|||.+.+..++.++||||||+++|||++|+.||...... ............ ..
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~------~~~~~~~~~~~~---------~~ 235 (294)
T 2rku_A 171 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK------ETYLRIKKNEYS---------IP 235 (294)
T ss_dssp CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH------HHHHHHHTTCCC---------CC
T ss_pred ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHhhccCC---------Cc
Confidence 2345788999999999988999999999999999999999999754311 111111111100 01
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 005693 621 QNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMI 655 (682)
Q Consensus 621 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L 655 (682)
.. ....+.+++.+||+.||++|||++|++++-
T Consensus 236 ~~---~~~~~~~li~~~l~~~p~~Rps~~~ll~~~ 267 (294)
T 2rku_A 236 KH---INPVAASLIQKMLQTDPTARPTINELLNDE 267 (294)
T ss_dssp TT---SCHHHHHHHHHHTCSSGGGSCCGGGGGGSH
T ss_pred cc---cCHHHHHHHHHHcccChhhCcCHHHHhhCh
Confidence 11 123466778899999999999999999853
No 197
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=8.5e-37 Score=319.97 Aligned_cols=240 Identities=25% Similarity=0.406 Sum_probs=191.5
Q ss_pred hccccccCeEEEEEEEEcC-CceEEEEEeeccccChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccCCch
Q 005693 390 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL 468 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~L 468 (682)
.+.||+|+||.||+|.... ++.||+|.+.... ..+++.+|++++.++ +||||+++++++...+..++||||+++|+|
T Consensus 34 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 111 (314)
T 3com_A 34 LEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES-DLQEIIKEISIMQQC-DSPHVVKYYGSYFKNTDLWIVMEYCGAGSV 111 (314)
T ss_dssp EEECC----CEEEEEEETTTCCEEEEEEEETTS-CCHHHHHHHHHHHTC-CCTTBCCEEEEEEETTEEEEEEECCTTEEH
T ss_pred heeeccCCCeEEEEEEECCCCCEEEEEecCchH-HHHHHHHHHHHHHhC-CCCCCccEEEEEEeCCEEEEEeecCCCCCH
Confidence 4689999999999999764 7889999987643 356788999999999 999999999999999999999999999999
Q ss_pred hHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCC----CC
Q 005693 469 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP----AT 544 (682)
Q Consensus 469 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~----~~ 544 (682)
.+++... ...+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||++...... ..
T Consensus 112 ~~~~~~~----~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 184 (314)
T 3com_A 112 SDIIRLR----NKTLTEDEIATILQSTLKGLEYLHFMR---KIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT 184 (314)
T ss_dssp HHHHHHH----TCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECBTTBSCBCC
T ss_pred HHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhCC---CcCCCcCHHHEEECCCCCEEEeecccchhhhhhccccCc
Confidence 9998632 234899999999999999999999998 999999999999999999999999998665432 23
Q ss_pred CCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhccccChH
Q 005693 545 PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIE 624 (682)
Q Consensus 545 ~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 624 (682)
..+++.|+|||++.+..++.++||||||+++|||++|+.||...... ....... ....... ....
T Consensus 185 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~~~~~~-~~~~~~~--------~~~~ 249 (314)
T 3com_A 185 VIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPM------RAIFMIP-TNPPPTF--------RKPE 249 (314)
T ss_dssp CCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHH------HHHHHHH-HSCCCCC--------SSGG
T ss_pred cCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChH------HHHHHHh-cCCCccc--------CCcc
Confidence 45788999999999989999999999999999999999999753211 1111111 1110000 0111
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005693 625 EEMVQMLQIGMACVAKVPDMRPNMDEVVR 653 (682)
Q Consensus 625 ~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 653 (682)
.....+.+++.+||+.||++|||++|+++
T Consensus 250 ~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 250 LWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp GSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred cCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 12345677888999999999999999987
No 198
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=5.6e-37 Score=318.12 Aligned_cols=243 Identities=24% Similarity=0.300 Sum_probs=191.5
Q ss_pred ccccccCeEEEEEEEEc-CCceEEEEEeecccc-ChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccCCch
Q 005693 391 EVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV-GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL 468 (682)
Q Consensus 391 ~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~L 468 (682)
..||+|+||.||+|... +++.||+|.+..... ..+.+.+|+.++..+ +||||+++++++...+..++||||+++++|
T Consensus 28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 106 (295)
T 2clq_A 28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHL-KHKNIVQYLGSFSENGFIKIFMEQVPGGSL 106 (295)
T ss_dssp CEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTC-CCTTBCCEEEEEEETTEEEEEEECCSEEEH
T ss_pred EEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhC-CCCCEeeEeeEEEeCCcEEEEEEeCCCCCH
Confidence 47999999999999975 467899999876533 346788999999999 999999999999999999999999999999
Q ss_pred hHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecC-CCCeEEeecCCCCCCCCC----C
Q 005693 469 STLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQ-DLDGCISDFGLTPLMNVP----A 543 (682)
Q Consensus 469 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~-~~~~kl~DfGla~~~~~~----~ 543 (682)
.+++.... ....+++..+..++.|++.||+|||+.+ |+||||||+||+++. ++.+||+|||++...... .
T Consensus 107 ~~~l~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~ 181 (295)
T 2clq_A 107 SALLRSKW--GPLKDNEQTIGFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTE 181 (295)
T ss_dssp HHHHHHTT--CCCTTCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTCCEEECCTTTCEESCC-----C
T ss_pred HHHHHhhc--cCCCccHHHHHHHHHHHHHHHHHHHhCC---EEccCCChhhEEEECCCCCEEEeecccccccCCCCCccc
Confidence 99997543 2234678999999999999999999998 999999999999987 899999999999765432 2
Q ss_pred CCCCCCcccCccccccCC--CCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhcccc
Q 005693 544 TPSRSAGYRAPEVIETRK--HSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQ 621 (682)
Q Consensus 544 ~~~~~~~y~aPE~~~~~~--~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 621 (682)
...+++.|+|||++.+.. ++.++||||||+++|||++|+.||......+ ............. .
T Consensus 182 ~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-----~~~~~~~~~~~~~-----~----- 246 (295)
T 2clq_A 182 TFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQ-----AAMFKVGMFKVHP-----E----- 246 (295)
T ss_dssp CCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHH-----HHHHHHHHHCCCC-----C-----
T ss_pred ccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchh-----HHHHhhccccccc-----c-----
Confidence 345788999999997653 7899999999999999999999996432111 0000000000000 0
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 622 NIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 622 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
........+.+++.+||+.||++||+++|++++
T Consensus 247 ~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~ 279 (295)
T 2clq_A 247 IPESMSAEAKAFILKCFEPDPDKRACANDLLVD 279 (295)
T ss_dssp CCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTS
T ss_pred ccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 011223456677889999999999999999863
No 199
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=1.4e-36 Score=316.83 Aligned_cols=240 Identities=24% Similarity=0.379 Sum_probs=196.6
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeecccc--ChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccCC
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 466 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g 466 (682)
.+.||+|+||.||+|... +++.||+|++..... ..+.+.+|+.++..+ +||||+++++++.++...++||||++++
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 105 (303)
T 3a7i_A 27 LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQC-DSPYVTKYYGSYLKDTKLWIIMEYLGGG 105 (303)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEECCTTE
T ss_pred hhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhC-CCCCEeEEEEEEecCCeEEEEEEeCCCC
Confidence 468999999999999975 578899999975532 346789999999999 9999999999999999999999999999
Q ss_pred chhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCC----
Q 005693 467 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP---- 542 (682)
Q Consensus 467 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~---- 542 (682)
+|.+++.. ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 106 ~L~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 176 (303)
T 3a7i_A 106 SALDLLEP------GPLDETQIATILREILKGLDYLHSEK---KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR 176 (303)
T ss_dssp EHHHHHTT------SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCCB
T ss_pred cHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChheEEECCCCCEEEeecccceecCcccccc
Confidence 99999963 24899999999999999999999998 999999999999999999999999998665432
Q ss_pred CCCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhccccC
Q 005693 543 ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQN 622 (682)
Q Consensus 543 ~~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~ 622 (682)
....+++.|+|||++.+..++.++||||||+++|||++|+.||...... ..... ........ . ..
T Consensus 177 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~~~~-~~~~~~~~-~------~~- 241 (303)
T 3a7i_A 177 NTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM------KVLFL-IPKNNPPT-L------EG- 241 (303)
T ss_dssp CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH------HHHHH-HHHSCCCC-C------CS-
T ss_pred CccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHH------HHHHH-hhcCCCCC-C------cc-
Confidence 2345788899999999999999999999999999999999999754211 11111 11111100 0 01
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 005693 623 IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIE 656 (682)
Q Consensus 623 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~ 656 (682)
.....+.+++.+||+.||++|||++|++++..
T Consensus 242 --~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~ 273 (303)
T 3a7i_A 242 --NYSKPLKEFVEACLNKEPSFRPTAKELLKHKF 273 (303)
T ss_dssp --SCCHHHHHHHHHHCCSSGGGSCCHHHHTTCHH
T ss_pred --ccCHHHHHHHHHHcCCChhhCcCHHHHhhChh
Confidence 12234677888999999999999999998654
No 200
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=3.1e-37 Score=325.49 Aligned_cols=252 Identities=23% Similarity=0.348 Sum_probs=196.6
Q ss_pred hccccccCeEEEEEEEE------cCCceEEEEEeecccc--ChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEe
Q 005693 390 AEVLGKGSYGTAYKAVL------EESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYD 461 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~------~~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e 461 (682)
.+.||+|+||.||+|+. .++..||+|++..... ...++.+|+.++.++ +||||+++++++......++|||
T Consensus 35 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e 113 (327)
T 2yfx_A 35 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF-NHQNIVRCIGVSLQSLPRFILME 113 (327)
T ss_dssp EEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSCEEEEE
T ss_pred EEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhC-CCCCCCeEEEEEcCCCCcEEEEe
Confidence 47899999999999984 2466899999964422 345688899999999 99999999999999999999999
Q ss_pred eccCCchhHhhccCCCC--CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecC---CCCeEEeecCCC
Q 005693 462 YFASGSLSTLLHGNRGA--GRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQ---DLDGCISDFGLT 536 (682)
Q Consensus 462 ~~~~g~L~~~l~~~~~~--~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~---~~~~kl~DfGla 536 (682)
|+++|+|.+++...... ....+++..++.++.|++.||+|||+.+ |+||||||+||+++. +..+||+|||++
T Consensus 114 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~ 190 (327)
T 2yfx_A 114 LMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMA 190 (327)
T ss_dssp CCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEECCCHHH
T ss_pred cCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC---eecCcCCHhHEEEecCCCcceEEECccccc
Confidence 99999999999765321 1245899999999999999999999998 999999999999994 446999999988
Q ss_pred CCCCC------CCCCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccc
Q 005693 537 PLMNV------PATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWT 609 (682)
Q Consensus 537 ~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-g~~Pf~~~~~~~~~~l~~~~~~~~~~~~~ 609 (682)
..... .....+++.|+|||++.+..++.++||||||+++|||+| |..||...... ...........
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~------~~~~~~~~~~~- 263 (327)
T 2yfx_A 191 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ------EVLEFVTSGGR- 263 (327)
T ss_dssp HHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH------HHHHHHHTTCC-
T ss_pred cccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHH------HHHHHHhcCCC-
Confidence 64322 122345778999999998899999999999999999998 99999754311 11111111110
Q ss_pred cccchhhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcC
Q 005693 610 AEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 662 (682)
Q Consensus 610 ~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~~ 662 (682)
.. ........+.+++.+||+.||++||+++|++++|+.+.+..
T Consensus 264 ~~----------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~ 306 (327)
T 2yfx_A 264 MD----------PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 306 (327)
T ss_dssp CC----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred CC----------CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCH
Confidence 00 01122345677888999999999999999999999887644
No 201
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=4.4e-37 Score=342.23 Aligned_cols=241 Identities=23% Similarity=0.379 Sum_probs=195.9
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeeccc----cChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeecc
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 464 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~ 464 (682)
.+.||+|+||.||+|... +++.||+|++.... ...+.+.+|++++.++ +||||+++++++.+.+..++||||+.
T Consensus 31 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~~~ 109 (484)
T 3nyv_A 31 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL-DHPNIMKLYEFFEDKGYFYLVGEVYT 109 (484)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred eeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhC-CCCCCCcEEEEEEeCCEEEEEEecCC
Confidence 578999999999999976 57899999986542 2356789999999999 99999999999999999999999999
Q ss_pred CCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEe---cCCCCeEEeecCCCCCCCC
Q 005693 465 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLI---NQDLDGCISDFGLTPLMNV 541 (682)
Q Consensus 465 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl---~~~~~~kl~DfGla~~~~~ 541 (682)
+|+|.+++... ..+++..+..++.|++.||+|||+++ |+||||||+|||+ +.++.+||+|||+++....
T Consensus 110 ~~~L~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 181 (484)
T 3nyv_A 110 GGELFDEIISR-----KRFSEVDAARIIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA 181 (484)
T ss_dssp SCBHHHHHHTC-----SCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCC
T ss_pred CCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccc
Confidence 99999999743 34899999999999999999999998 9999999999999 5678999999999876654
Q ss_pred CC---CCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhc
Q 005693 542 PA---TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELM 618 (682)
Q Consensus 542 ~~---~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 618 (682)
.. ...+|+.|+|||++.+ .++.++||||+||++|+|++|+.||.+.... .....+........ ..
T Consensus 182 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~------~~~~~i~~~~~~~~-----~~ 249 (484)
T 3nyv_A 182 SKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEY------DILKKVEKGKYTFE-----LP 249 (484)
T ss_dssp CCSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHCCCCCC-----SG
T ss_pred ccccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHH------HHHHHHHcCCCCCC-----Cc
Confidence 43 2357899999999876 6899999999999999999999999864321 11222222211111 11
Q ss_pred cccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 619 RFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 619 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
... .....+.+++.+||+.||++|||++|++++
T Consensus 250 ~~~---~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 250 QWK---KVSESAKDLIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp GGG---GSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ccc---cCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence 111 123446677789999999999999999984
No 202
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=1.3e-36 Score=339.15 Aligned_cols=245 Identities=21% Similarity=0.355 Sum_probs=191.9
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeeccc---cChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccC
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV---VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 465 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~ 465 (682)
.+.||+|+||+||+|+.. ++..||+|++.... .....+.+|+.+++.+ +||||+++++++.+....++||||+++
T Consensus 42 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~~~~ 120 (494)
T 3lij_A 42 VKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLL-DHPNIMKLYDFFEDKRNYYLVMECYKG 120 (494)
T ss_dssp EEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred eeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhC-CCCCCCeEEEEEEeCCEEEEEEecCCC
Confidence 578999999999999976 57789999997653 2356788999999999 999999999999999999999999999
Q ss_pred CchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCC---CCeEEeecCCCCCCCCC
Q 005693 466 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQD---LDGCISDFGLTPLMNVP 542 (682)
Q Consensus 466 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~---~~~kl~DfGla~~~~~~ 542 (682)
|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.+ +.+||+|||++......
T Consensus 121 g~L~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~ 192 (494)
T 3lij_A 121 GELFDEIIHR-----MKFNEVDAAVIIKQVLSGVTYLHKHN---IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQ 192 (494)
T ss_dssp CBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTT
T ss_pred CcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCC
Confidence 9999988643 34899999999999999999999998 9999999999999764 45999999999765433
Q ss_pred ---CCCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhcc
Q 005693 543 ---ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMR 619 (682)
Q Consensus 543 ---~~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 619 (682)
....+|+.|+|||++. ..++.++||||+||++|+|++|..||.+.... .....+........ ...
T Consensus 193 ~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~------~~~~~i~~~~~~~~-----~~~ 260 (494)
T 3lij_A 193 KKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQ------EILRKVEKGKYTFD-----SPE 260 (494)
T ss_dssp BCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHTCCCCC-----SGG
T ss_pred ccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHhCCCCCC-----chh
Confidence 2346899999999986 46999999999999999999999999864321 22222222211100 001
Q ss_pred ccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHHh
Q 005693 620 FQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM--IEEV 658 (682)
Q Consensus 620 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~--L~~i 658 (682)
.... ...+.+++.+||+.||++|||++|++++ +.+.
T Consensus 261 ~~~~---s~~~~~li~~~L~~dp~~R~s~~e~l~hp~~~~~ 298 (494)
T 3lij_A 261 WKNV---SEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEM 298 (494)
T ss_dssp GTTS---CHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHHH
T ss_pred cccC---CHHHHHHHHHHCCCChhhCccHHHHhcCcccccC
Confidence 1122 2345677789999999999999999974 4443
No 203
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=1.8e-36 Score=318.88 Aligned_cols=241 Identities=23% Similarity=0.368 Sum_probs=187.4
Q ss_pred hccccccCeEEEEEEEEcC-CceEEEEEeecccc---------ChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEE
Q 005693 390 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVVV---------GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLV 459 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~---------~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV 459 (682)
.+.||+|+||.||+|.... ++.||+|++..... ....+.+|++++.++ +||||+++++++..++ .++|
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~-~~lv 92 (322)
T 2ycf_A 15 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKL-NHPCIIKIKNFFDAED-YYIV 92 (322)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHC-CCTTBCCEEEEEESSS-EEEE
T ss_pred eeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhC-CCCCCceEeeEEcCCc-eEEE
Confidence 5789999999999999764 67899999865321 124588999999999 9999999999987654 8999
Q ss_pred EeeccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCC---eEEeecCCC
Q 005693 460 YDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLD---GCISDFGLT 536 (682)
Q Consensus 460 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~---~kl~DfGla 536 (682)
|||+++|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++. +||+|||++
T Consensus 93 ~e~~~~~~L~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~ 164 (322)
T 2ycf_A 93 LELMEGGELFDKVVGN-----KRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHS 164 (322)
T ss_dssp EECCTTEETHHHHSTT-----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSSSCCEEECCCTTC
T ss_pred EecCCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEecCCCCCeEEEccCccc
Confidence 9999999999998643 34899999999999999999999998 999999999999987665 999999999
Q ss_pred CCCCCCC---CCCCCCcccCccccc---cCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcccc
Q 005693 537 PLMNVPA---TPSRSAGYRAPEVIE---TRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTA 610 (682)
Q Consensus 537 ~~~~~~~---~~~~~~~y~aPE~~~---~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~ 610 (682)
....... ...+++.|+|||++. ...++.++|||||||++|||++|..||....... .+..... .....
T Consensus 165 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~~~~----~~~~~ 238 (322)
T 2ycf_A 165 KILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV--SLKDQIT----SGKYN 238 (322)
T ss_dssp EECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSS--CHHHHHH----HTCCC
T ss_pred eecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHH--HHHHHHH----hCccc
Confidence 8765432 224788999999974 5668899999999999999999999997544322 1211111 11000
Q ss_pred ccchhhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005693 611 EVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVR 653 (682)
Q Consensus 611 ~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 653 (682)
..+.. . ......+.+++.+||+.||++|||++|+++
T Consensus 239 --~~~~~--~---~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 239 --FIPEV--W---AEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp --CCHHH--H---TTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred --cCchh--h---hhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 00000 0 112345677888999999999999999985
No 204
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.8e-37 Score=328.62 Aligned_cols=255 Identities=22% Similarity=0.348 Sum_probs=191.2
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeeccccC------hhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEee
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG------KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDY 462 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~------~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~ 462 (682)
.+.||+|+||.||+|... +++.||+|++...... .+.+.+|++++..+ +||||+++++++.+.+..++||||
T Consensus 15 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~ 93 (346)
T 1ua2_A 15 LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL-SHPNIIGLLDAFGHKSNISLVFDF 93 (346)
T ss_dssp EEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHC-CCTTBCCEEEEECCTTCCEEEEEC
T ss_pred EeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhC-CCCCCCeEEEEEeeCCceEEEEEc
Confidence 578999999999999975 4788999998753221 24678999999999 899999999999999999999999
Q ss_pred ccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCC
Q 005693 463 FASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP 542 (682)
Q Consensus 463 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~ 542 (682)
+++ +|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 94 ~~~-~l~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~ 165 (346)
T 1ua2_A 94 MET-DLEVIIKDNS----LVLTPSHIKAYMLMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSP 165 (346)
T ss_dssp CSE-EHHHHHTTCC----SSCCSSHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECCCGGGSTTTSC
T ss_pred CCC-CHHHHHHhcC----cCCCHHHHHHHHHHHHHHHHHHHHCC---EECCCCCHHHEEEcCCCCEEEEecccceeccCC
Confidence 986 8988886432 34888999999999999999999998 999999999999999999999999999876432
Q ss_pred ----CCCCCCCcccCccccccC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHh---hhccccc--c
Q 005693 543 ----ATPSRSAGYRAPEVIETR-KHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVV---REEWTAE--V 612 (682)
Q Consensus 543 ----~~~~~~~~y~aPE~~~~~-~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~---~~~~~~~--~ 612 (682)
....+|+.|+|||++.+. .++.++|||||||++|||++|..||.+....+. +........ .+.|... .
T Consensus 166 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~~~~~ 243 (346)
T 1ua2_A 166 NRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQ--LTRIFETLGTPTEEQWPDMCSL 243 (346)
T ss_dssp CCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHHHHCCCCTTTSSSTTSS
T ss_pred cccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHH--HHHHHHHcCCCChhhhhhhccC
Confidence 234578899999999764 478999999999999999999999976432111 111111100 0011000 0
Q ss_pred chh-hhccccC------hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 005693 613 FDV-ELMRFQN------IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMI 655 (682)
Q Consensus 613 ~d~-~l~~~~~------~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L 655 (682)
.+. ....... .......+.+++.+||+.||++|||++|++++-
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~ 293 (346)
T 1ua2_A 244 PDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMK 293 (346)
T ss_dssp TTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSG
T ss_pred cccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcCh
Confidence 000 0000000 012234677888899999999999999999853
No 205
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=1.3e-36 Score=322.07 Aligned_cols=238 Identities=21% Similarity=0.349 Sum_probs=194.5
Q ss_pred hccccccCeEEEEEEEEcC-CceEEEEEeecccc----ChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeecc
Q 005693 390 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVVV----GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 464 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~----~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~ 464 (682)
.+.||+|+||.||++...+ ++.+|+|++..... ..+.+.+|+.++..+ +|+||+++++++.+.+..++||||++
T Consensus 46 ~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~ 124 (335)
T 2owb_A 46 GRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVVGFHGFFEDNDFVFVVLELCR 124 (335)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEecCCeEEEEEecCC
Confidence 4789999999999999865 67789999875532 235678899999999 99999999999999999999999999
Q ss_pred CCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCC--
Q 005693 465 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP-- 542 (682)
Q Consensus 465 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~-- 542 (682)
+++|.+++... ..+++.++..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++......
T Consensus 125 ~~~L~~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 196 (335)
T 2owb_A 125 RRSLLELHKRR-----KALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE 196 (335)
T ss_dssp TCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTCEECCSTTC
T ss_pred CCCHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---CEecCCCchhEEEcCCCCEEEeeccCceecccCcc
Confidence 99999998643 24899999999999999999999998 999999999999999999999999999765422
Q ss_pred --CCCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhccc
Q 005693 543 --ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 620 (682)
Q Consensus 543 --~~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 620 (682)
....+++.|+|||++.+..++.++||||||+++|||++|+.||..... ............. ..
T Consensus 197 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~~~~~~~~~~~~~---------~~ 261 (335)
T 2owb_A 197 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL------KETYLRIKKNEYS---------IP 261 (335)
T ss_dssp CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHHHHHHTCCC---------CC
T ss_pred cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCH------HHHHHHHhcCCCC---------CC
Confidence 234578899999999998899999999999999999999999975431 1111111111110 01
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 621 QNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 621 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
.. ....+.+++.+||+.||++|||++|++++
T Consensus 262 ~~---~~~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 262 KH---INPVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp TT---SCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred cc---CCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 11 12345677889999999999999999984
No 206
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=8.7e-37 Score=329.33 Aligned_cols=195 Identities=22% Similarity=0.302 Sum_probs=165.7
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeeccccChhhHHHHHHHHHHhcCCCc-----eeceEEEEEecCceEEEEeec
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPN-----VVPLRAYYYSKDEKLLVYDYF 463 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~n-----iv~l~~~~~~~~~~~lV~e~~ 463 (682)
.+.||+|+||+||+|... +++.||||+++.......++..|++++..+.+|++ |+++++++...+..++||||+
T Consensus 59 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~ 138 (382)
T 2vx3_A 59 DSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEML 138 (382)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEEEEEECC
T ss_pred EEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceEEEEecC
Confidence 468999999999999976 46789999997654445667888889888865664 999999999999999999999
Q ss_pred cCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEec--CCCCeEEeecCCCCCCCC
Q 005693 464 ASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLIN--QDLDGCISDFGLTPLMNV 541 (682)
Q Consensus 464 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~--~~~~~kl~DfGla~~~~~ 541 (682)
+ |+|.+++.... ...+++..+..++.|++.||.|||.+. .+|+||||||+|||++ .++.+||+|||+++....
T Consensus 139 ~-~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~al~~lH~~~-~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~~ 213 (382)
T 2vx3_A 139 S-YNLYDLLRNTN---FRGVSLNLTRKFAQQMCTALLFLATPE-LSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ 213 (382)
T ss_dssp C-CBHHHHHHHTT---TSCCCHHHHHHHHHHHHHHHHHHTSTT-TCEECCCCSGGGEEESSTTSCCEEECCCTTCEETTC
T ss_pred C-CCHHHHHhhcC---cCCCCHHHHHHHHHHHHHHHHHhccCC-CCEEcCCCCcccEEEecCCCCcEEEEeccCceeccc
Confidence 6 59999997543 234899999999999999999999521 2399999999999995 478899999999977654
Q ss_pred C-CCCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCC
Q 005693 542 P-ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPT 589 (682)
Q Consensus 542 ~-~~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~ 589 (682)
. ....+|+.|+|||++.+..++.++|||||||++|||+||+.||.+..
T Consensus 214 ~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~ 262 (382)
T 2vx3_A 214 RIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGAN 262 (382)
T ss_dssp CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 3 34568899999999999999999999999999999999999998654
No 207
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=1.5e-36 Score=311.93 Aligned_cols=238 Identities=21% Similarity=0.333 Sum_probs=188.3
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeeccc----cChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeecc
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 464 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~ 464 (682)
.+.||+|+||.||+|... +++.||+|++.... ...+.+.+|++++..+ +||||+++++++...+..++||||++
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~ 94 (276)
T 2h6d_A 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLF-RHPHIIKLYQVISTPTDFFMVMEYVS 94 (276)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcC-CCCCEeEEEEEEecCCeEEEEEeccC
Confidence 478999999999999986 68899999987542 2345788999999998 89999999999999999999999999
Q ss_pred CCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCCC-
Q 005693 465 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA- 543 (682)
Q Consensus 465 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~- 543 (682)
+++|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 95 ~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~ 166 (276)
T 2h6d_A 95 GGELFDYICKH-----GRVEEMEARRLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF 166 (276)
T ss_dssp SCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHHC---SSCCCCCGGGEEECTTSCEEECCCCGGGCCCC---
T ss_pred CCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChhhEEECCCCCEEEeecccccccCCCcc
Confidence 99999999743 23899999999999999999999998 9999999999999999999999999997765432
Q ss_pred --CCCCCCcccCccccccCCC-CCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhccc
Q 005693 544 --TPSRSAGYRAPEVIETRKH-SHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 620 (682)
Q Consensus 544 --~~~~~~~y~aPE~~~~~~~-~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 620 (682)
...+++.|+|||.+.+..+ +.++||||||+++|||++|+.||.... .......+...... ..
T Consensus 167 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~------~~~~~~~~~~~~~~---------~~ 231 (276)
T 2h6d_A 167 LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEH------VPTLFKKIRGGVFY---------IP 231 (276)
T ss_dssp ----------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHCCCC---------CC
T ss_pred eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCc------HHHHHHHhhcCccc---------Cc
Confidence 3357888999999988765 689999999999999999999997532 11112211111100 00
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 621 QNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 621 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
. .....+.+++.+||+.||++|||++|++++
T Consensus 232 ~---~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 232 E---YLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp T---TSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred h---hcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 1 112346678889999999999999999985
No 208
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=9.1e-37 Score=323.30 Aligned_cols=245 Identities=19% Similarity=0.279 Sum_probs=168.0
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeeccccChhhHHHHHHHHHHhcCCCceeceEEEEEe----cCceEEEEeecc
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYS----KDEKLLVYDYFA 464 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~----~~~~~lV~e~~~ 464 (682)
.+.||+|+||+||+|... +++.||+|++... ....+|+....+..+||||+++++++.. +...++||||++
T Consensus 34 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~ 109 (336)
T 3fhr_A 34 KQVLGLGVNGKVLECFHRRTGQKCALKLLYDS----PKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECME 109 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEESS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCT
T ss_pred ceeeeeCCCeEEEEEEECCCCCEEEEEEecCc----HHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEeccC
Confidence 457999999999999986 5789999998653 3344455554455599999999999976 445799999999
Q ss_pred CCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCC---CCeEEeecCCCCCCCC
Q 005693 465 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQD---LDGCISDFGLTPLMNV 541 (682)
Q Consensus 465 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~---~~~kl~DfGla~~~~~ 541 (682)
+|+|.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.+ +.+||+|||+++....
T Consensus 110 gg~L~~~l~~~~---~~~l~~~~~~~i~~ql~~~l~~LH~~~---ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~ 183 (336)
T 3fhr_A 110 GGELFSRIQERG---DQAFTEREAAEIMRDIGTAIQFLHSHN---IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQ 183 (336)
T ss_dssp TEEHHHHHHTC----CCCCBHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSTTCCEEECCCTTCEEC--
T ss_pred CCCHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEEecCCCceEEEeccccceeccc
Confidence 999999998543 235899999999999999999999998 9999999999999864 5599999999976543
Q ss_pred C--CCCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhcc
Q 005693 542 P--ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMR 619 (682)
Q Consensus 542 ~--~~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 619 (682)
. ....+++.|+|||++.+..++.++||||||+++|||++|+.||........... ......... .......
T Consensus 184 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~--~~~~~~~~~-----~~~~~~~ 256 (336)
T 3fhr_A 184 NALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPG--MKRRIRLGQ-----YGFPNPE 256 (336)
T ss_dssp --------------------CHHHHHHHHHHHHHHHHHHHHSSCCC----------------------------CCCTTT
T ss_pred cccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhh--HHHhhhccc-----cccCchh
Confidence 3 234578899999999888899999999999999999999999976543321100 000000000 0000000
Q ss_pred ccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 620 FQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 620 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
. ......+.+++.+||+.||++|||++|++++
T Consensus 257 ~---~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 288 (336)
T 3fhr_A 257 W---SEVSEDAKQLIRLLLKTDPTERLTITQFMNH 288 (336)
T ss_dssp S---TTCCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred h---ccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 1 1223456677889999999999999999984
No 209
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=1.6e-37 Score=328.14 Aligned_cols=249 Identities=21% Similarity=0.298 Sum_probs=184.6
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeeccccC---hhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccC
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 465 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~ 465 (682)
.+.||+|+||+||+|... +++.||+|+++..... .+.+.+|++++.++ +||||+++++++.+++..++||||+++
T Consensus 39 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~ 117 (329)
T 3gbz_A 39 ITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKEL-QHRNIIELKSVIHHNHRLHLIFEYAEN 117 (329)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGC-CCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred EEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHc-CCCCcceEEEEEecCCEEEEEEecCCC
Confidence 478999999999999965 5788999999754322 34577899999999 999999999999999999999999985
Q ss_pred CchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEec-----CCCCeEEeecCCCCCCC
Q 005693 466 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLIN-----QDLDGCISDFGLTPLMN 540 (682)
Q Consensus 466 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~-----~~~~~kl~DfGla~~~~ 540 (682)
+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++ +++.+||+|||+++...
T Consensus 118 -~L~~~~~~~~-----~~~~~~~~~i~~ql~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~ 188 (329)
T 3gbz_A 118 -DLKKYMDKNP-----DVSMRVIKSFLYQLINGVNFCHSRR---CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFG 188 (329)
T ss_dssp -EHHHHHHHCT-----TCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC
T ss_pred -CHHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHHhCC---EECCCCCHHHEEEecCCCCccceEEECcCCCccccC
Confidence 9999997543 3899999999999999999999998 99999999999994 45569999999987554
Q ss_pred CC----CCCCCCCcccCccccccC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcc------c
Q 005693 541 VP----ATPSRSAGYRAPEVIETR-KHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEW------T 609 (682)
Q Consensus 541 ~~----~~~~~~~~y~aPE~~~~~-~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~------~ 609 (682)
.. ....+|+.|+|||++.+. .++.++|||||||++|||++|+.||.+....+ ....+..... .
T Consensus 189 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~------~~~~~~~~~~~~~~~~~ 262 (329)
T 3gbz_A 189 IPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEID------QLFKIFEVLGLPDDTTW 262 (329)
T ss_dssp -----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHHHCCCCTTTS
T ss_pred CcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHH------HHHHHHHHhCCCchhhh
Confidence 22 233568899999999875 48999999999999999999999997643211 1111111000 0
Q ss_pred ccc-----chhhhc--cccChHH-----HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 610 AEV-----FDVELM--RFQNIEE-----EMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 610 ~~~-----~d~~l~--~~~~~~~-----~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
... +..... ....... ....+.+++.+||+.||++|||++|++++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 319 (329)
T 3gbz_A 263 PGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEH 319 (329)
T ss_dssp TTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred hhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCC
Confidence 000 000000 0000011 22456788889999999999999999873
No 210
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=1.2e-36 Score=314.82 Aligned_cols=244 Identities=22% Similarity=0.330 Sum_probs=176.6
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeeccccC--hhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccCC
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG--KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 466 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~--~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g 466 (682)
.+.||+|+||+||+|... +++.||+|+++..... ..+...|...+.+..+||||+++++++.+++..++||||+++
T Consensus 12 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~- 90 (290)
T 3fme_A 12 IMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDT- 90 (290)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEECCSE-
T ss_pred HHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEehhcc-
Confidence 468999999999999974 5788999999764332 223334444434444899999999999999999999999974
Q ss_pred chhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCCC--
Q 005693 467 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSM-GGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA-- 543 (682)
Q Consensus 467 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~-~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~-- 543 (682)
+|.+++..... ....+++..+..++.|++.||+|||++ + |+||||||+||+++.++.+||+|||+++......
T Consensus 91 ~l~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 166 (290)
T 3fme_A 91 SLDKFYKQVID-KGQTIPEDILGKIAVSIVKALEHLHSKLS---VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAK 166 (290)
T ss_dssp EHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHHHSC---CCCCCCSGGGCEECTTCCEEBCCC------------
T ss_pred chHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeecCCcccccccccc
Confidence 88877754211 133589999999999999999999998 8 9999999999999999999999999997664432
Q ss_pred -CCCCCCcccCcccc----ccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhc
Q 005693 544 -TPSRSAGYRAPEVI----ETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELM 618 (682)
Q Consensus 544 -~~~~~~~y~aPE~~----~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 618 (682)
...+++.|+|||++ .+..++.++||||||+++|||++|+.||..... ............... .
T Consensus 167 ~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~~~-~------ 234 (290)
T 3fme_A 167 DIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGT-----PFQQLKQVVEEPSPQ-L------ 234 (290)
T ss_dssp ---CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSC-----HHHHHHHHHHSCCCC-C------
T ss_pred cccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCc-----hHHHHHHHhccCCCC-c------
Confidence 23578899999996 556789999999999999999999999974321 111111111111110 0
Q ss_pred cccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005693 619 RFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVR 653 (682)
Q Consensus 619 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 653 (682)
........+.+++.+||+.||++|||++|+++
T Consensus 235 ---~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 235 ---PADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp ---CTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred ---ccccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 00112345677888999999999999999998
No 211
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=2e-36 Score=314.68 Aligned_cols=254 Identities=22% Similarity=0.321 Sum_probs=190.7
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeecccc---ChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccC
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV---GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 465 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~ 465 (682)
.+.||+|+||.||+|+.. +++.||+|+++.... ..+.+.+|++++.++ +||||+++++++..++..++||||++
T Consensus 8 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~- 85 (299)
T 2r3i_A 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NHPNIVKLLDVIHTENKLYLVFEFLH- 85 (299)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEEEEEECCS-
T ss_pred hhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHc-CCCCeeeEEEEEecCCceEEEEEccc-
Confidence 467999999999999976 578899999865432 235788999999999 89999999999999999999999997
Q ss_pred CchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCC---
Q 005693 466 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP--- 542 (682)
Q Consensus 466 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~--- 542 (682)
|+|.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 86 ~~L~~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~ 159 (299)
T 2r3i_A 86 QDLKKFMDASA---LTGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 159 (299)
T ss_dssp EEHHHHHHHTT---TTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCSBC
T ss_pred CCHHHHHHhhh---ccCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHeEEcCCCCEEECcchhhhhccCCccc
Confidence 59999997543 234889999999999999999999998 999999999999999999999999988654322
Q ss_pred -CCCCCCCcccCccccccCC-CCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhh--cccc-----ccc
Q 005693 543 -ATPSRSAGYRAPEVIETRK-HSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVRE--EWTA-----EVF 613 (682)
Q Consensus 543 -~~~~~~~~y~aPE~~~~~~-~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~--~~~~-----~~~ 613 (682)
....+++.|+|||++.+.. ++.++||||||+++|||++|+.||.+....+. +.......... .... ...
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (299)
T 2r3i_A 160 YTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ--LFRIFRTLGTPDEVVWPGVTSMPDY 237 (299)
T ss_dssp TTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH--HHHHHHHHCCCCTTTSTTGGGSTTC
T ss_pred cCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHH--HHHHHHHhCCCchhhhhHhhcCccc
Confidence 2335788999999998765 78999999999999999999999986432110 11111110000 0000 000
Q ss_pred hhhhcc--ccCh----HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005693 614 DVELMR--FQNI----EEEMVQMLQIGMACVAKVPDMRPNMDEVVR 653 (682)
Q Consensus 614 d~~l~~--~~~~----~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 653 (682)
...... .... ......+.+++.+|++.||++|||++|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp CTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred chhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 000000 0000 112245677888999999999999999987
No 212
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=5.7e-37 Score=315.52 Aligned_cols=249 Identities=20% Similarity=0.304 Sum_probs=193.3
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeeccccC---hhhHHHHHHHHHHhcCCCceeceEEEEEe--cCceEEEEeec
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYS--KDEKLLVYDYF 463 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~--~~~~~lV~e~~ 463 (682)
.+.||+|+||.||++... +++.||+|++...... .+.+.+|++++.++ +||||+++++++.. ....++||||+
T Consensus 11 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~~lv~e~~ 89 (279)
T 2w5a_A 11 LYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL-KHPNIVRYYDRIIDRTNTTLYIVMEYC 89 (279)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEEGGGTEEEEEEECC
T ss_pred ehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhc-CCCCCCeEEEEEecCCCceEEEEEeCC
Confidence 468999999999999976 5788999999754332 35688899999999 89999999998864 56789999999
Q ss_pred cCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC--CCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCC
Q 005693 464 ASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMG--GPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV 541 (682)
Q Consensus 464 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~--~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~ 541 (682)
++|+|.+++..... ....+++..+..++.|++.||+|||+.+ ..+|+||||||+||+++.++.+||+|||+++....
T Consensus 90 ~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~~~ 168 (279)
T 2w5a_A 90 EGGDLASVITKGTK-ERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNH 168 (279)
T ss_dssp TTEEHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHHHC--
T ss_pred CCCCHHHHHHhhcc-cCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchheeecc
Confidence 99999999975332 2344899999999999999999999976 23499999999999999999999999999876544
Q ss_pred CC----CCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhh
Q 005693 542 PA----TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVEL 617 (682)
Q Consensus 542 ~~----~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 617 (682)
.. ...+++.|+|||++.+..++.++||||||+++|||++|+.||...... .....+. .......
T Consensus 169 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~~~~i~-~~~~~~~----- 236 (279)
T 2w5a_A 169 DTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK------ELAGKIR-EGKFRRI----- 236 (279)
T ss_dssp -CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHH-HTCCCCC-----
T ss_pred ccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHH------HHHHHHh-hcccccC-----
Confidence 32 124788899999999989999999999999999999999999754311 1111111 1111100
Q ss_pred ccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHH
Q 005693 618 MRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEE 657 (682)
Q Consensus 618 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~ 657 (682)
. ......+.+++.+||+.||++||+++|+++++..
T Consensus 237 --~---~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~ 271 (279)
T 2w5a_A 237 --P---YRYSDELNEIITRMLNLKDYHRPSVEEILENPLI 271 (279)
T ss_dssp --C---TTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred --C---cccCHHHHHHHHHHcCCCcccCCCHHHHHhChhh
Confidence 0 1123456777889999999999999999987653
No 213
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=3e-36 Score=330.37 Aligned_cols=187 Identities=26% Similarity=0.400 Sum_probs=158.9
Q ss_pred hccccccCeEEEEEEEEcC-CceEEEEEeeccccC---hhhHHHHHHHHHHhcCCCceeceEEEEEec-----CceEEEE
Q 005693 390 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSK-----DEKLLVY 460 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~-----~~~~lV~ 460 (682)
.+.||+|+||.||+|.... ++.||||+++..... .+.+.+|++++.++ +||||+++++++... ...|+||
T Consensus 31 ~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~~~~~~lv~ 109 (432)
T 3n9x_A 31 KHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRL-KSDYIIRLYDLIIPDDLLKFDELYIVL 109 (432)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHC-CCTTBCCEEEECCCSCTTTCCCEEEEE
T ss_pred EEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHc-CCCCcceEEEEEecCCCCcCCeEEEEE
Confidence 4789999999999999764 678999999764332 35688999999999 899999999999766 5689999
Q ss_pred eeccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCC
Q 005693 461 DYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN 540 (682)
Q Consensus 461 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~ 540 (682)
||++ |+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 110 e~~~-~~L~~~~~~~-----~~l~~~~~~~i~~qil~aL~~LH~~g---ivHrDlkp~NILl~~~~~~kL~DFGla~~~~ 180 (432)
T 3n9x_A 110 EIAD-SDLKKLFKTP-----IFLTEEHIKTILYNLLLGENFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLARTIN 180 (432)
T ss_dssp ECCS-EEHHHHHHSS-----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEEC-
T ss_pred ecCC-cCHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---CCCCCCCHHHeEECCCCCEEEccCCCccccc
Confidence 9986 5999999743 34899999999999999999999998 9999999999999999999999999997654
Q ss_pred CC--------------------------CCCCCCCcccCcccc-ccCCCCCcchHHHHHHHHHHHHhCCCCCC
Q 005693 541 VP--------------------------ATPSRSAGYRAPEVI-ETRKHSHKSDVYSFGVLLLEMLTGKAPLQ 586 (682)
Q Consensus 541 ~~--------------------------~~~~~~~~y~aPE~~-~~~~~~~~sDvwS~Gvvl~elltg~~Pf~ 586 (682)
.. ....+|+.|+|||++ ....++.++||||+||++|||++|..||.
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 181 SEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp ------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred ccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 32 234578999999986 55669999999999999999998655554
No 214
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=5.4e-37 Score=319.51 Aligned_cols=242 Identities=21% Similarity=0.333 Sum_probs=189.2
Q ss_pred hccccccCeEEEEEEEEcC-CceEEEEEeeccc-cChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccCCc
Q 005693 390 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVV-VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGS 467 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~-~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~ 467 (682)
.+.||+|+||.||+|.... ++.||+|++.... ...+.+.+|++++..+ +||||+++++++..++..++||||+++++
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 102 (302)
T 2j7t_A 24 VGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATC-DHPYIVKLLGAYYHDGKLWIMIEFCPGGA 102 (302)
T ss_dssp EEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHC-CCTTBCCEEEEEECC-CEEEEEECCTTEE
T ss_pred cceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcC-CCCCEeeeeeeeeeCCeEEEEEEeCCCCc
Confidence 4679999999999999864 7789999986543 3456788999999999 89999999999999999999999999999
Q ss_pred hhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCC----CCCC
Q 005693 468 LSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM----NVPA 543 (682)
Q Consensus 468 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~----~~~~ 543 (682)
|.+++.... ..+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||++... ....
T Consensus 103 l~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 175 (302)
T 2j7t_A 103 VDAIMLELD----RGLTEPQIQVVCRQMLEALNFLHSKR---IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRD 175 (302)
T ss_dssp HHHHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHHC--
T ss_pred HHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHHHEEECCCCCEEEEECCCCccccccccccc
Confidence 999986432 34899999999999999999999998 999999999999999999999999987432 1223
Q ss_pred CCCCCCcccCcccc-----ccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhc
Q 005693 544 TPSRSAGYRAPEVI-----ETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELM 618 (682)
Q Consensus 544 ~~~~~~~y~aPE~~-----~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 618 (682)
...+++.|+|||++ ....++.++||||||+++|||++|+.||..... .............. .
T Consensus 176 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~~~~~~-~------ 242 (302)
T 2j7t_A 176 SFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP------MRVLLKIAKSDPPT-L------ 242 (302)
T ss_dssp ---CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHHHHHHSCCCC-C------
T ss_pred cccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCH------HHHHHHHhccCCcc-c------
Confidence 44678899999998 366789999999999999999999999975431 11122221111110 0
Q ss_pred cccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 619 RFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 619 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
.........+.+++.+||+.||++|||++|++++
T Consensus 243 --~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 276 (302)
T 2j7t_A 243 --LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEH 276 (302)
T ss_dssp --SSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTS
T ss_pred --CCccccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 0011123456778889999999999999999863
No 215
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=3.1e-36 Score=323.71 Aligned_cols=253 Identities=21% Similarity=0.301 Sum_probs=184.7
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeeccccC---hhhHHHHHHHHHHhcCCCceeceEEEEEecC------ceEEE
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKD------EKLLV 459 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~------~~~lV 459 (682)
.+.||+|+||.||+|... +++.||+|++...... .+.+.+|+.+++.+ +||||+++++++...+ ..++|
T Consensus 30 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~~~~~~~lv 108 (371)
T 2xrw_A 30 LKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV-NHKNIIGLLNVFTPQKSLEEFQDVYIV 108 (371)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHC-CCTTBCCEEEEECSCCSTTTCCEEEEE
T ss_pred eeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhc-CCCCccceEEeeccccccccccceEEE
Confidence 468999999999999975 4778999999764332 34677899999998 8999999999997665 67999
Q ss_pred EeeccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCC
Q 005693 460 YDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM 539 (682)
Q Consensus 460 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~ 539 (682)
|||+++ +|.+++.. .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++..
T Consensus 109 ~e~~~~-~l~~~~~~-------~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~ 177 (371)
T 2xrw_A 109 MELMDA-NLCQVIQM-------ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA 177 (371)
T ss_dssp EECCSE-EHHHHHHS-------CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCCCC----
T ss_pred EEcCCC-CHHHHHhh-------ccCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCCCCEEEEEeeccccc
Confidence 999975 78888852 2889999999999999999999998 999999999999999999999999999876
Q ss_pred CCC---CCCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCC---------ChhHH-------H
Q 005693 540 NVP---ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMV---------DLPRW-------V 600 (682)
Q Consensus 540 ~~~---~~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~---------~l~~~-------~ 600 (682)
... ....+|+.|+|||++.+..++.++|||||||++|||++|+.||.+....+.. ..+.+ .
T Consensus 178 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 257 (371)
T 2xrw_A 178 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTV 257 (371)
T ss_dssp ------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHH
T ss_pred ccccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHH
Confidence 543 2345788999999999999999999999999999999999999865321100 00000 0
Q ss_pred HHHhhhccc--cccchhhhc---ccc---ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 601 QSVVREEWT--AEVFDVELM---RFQ---NIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 601 ~~~~~~~~~--~~~~d~~l~---~~~---~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
......... ...+..... ... ........+.+++.+||+.||++|||++|++++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 258 RTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp HHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred HHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 000000000 000000000 000 012235567889999999999999999999984
No 216
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=2e-36 Score=323.82 Aligned_cols=250 Identities=21% Similarity=0.323 Sum_probs=185.6
Q ss_pred hccccccCeEEEEEEEEcCCceEEEEEeeccccC------------hhhHHHHHHHHHHhcCCCceeceEEEEEecC---
Q 005693 390 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVG------------KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKD--- 454 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~------------~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~--- 454 (682)
.+.||+|+||.||+|...+++.||+|++...... .+.+.+|++++.++ +||||+++++++...+
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~ 105 (362)
T 3pg1_A 27 QRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHF-HHPNILGLRDIFVHFEEPA 105 (362)
T ss_dssp EEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEEEECCTTT
T ss_pred eEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhC-CCcCccceeeeEEeccCCC
Confidence 4789999999999999888999999998654321 15688999999999 8999999999986533
Q ss_pred --ceEEEEeeccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEee
Q 005693 455 --EKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISD 532 (682)
Q Consensus 455 --~~~lV~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~D 532 (682)
..++||||++ |+|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|
T Consensus 106 ~~~~~lv~e~~~-~~l~~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~D 177 (362)
T 3pg1_A 106 MHKLYLVTELMR-TDLAQVIHDQ----RIVISPQHIQYFMYHILLGLHVLHEAG---VVHRDLHPGNILLADNNDITICD 177 (362)
T ss_dssp CCEEEEEEECCS-EEHHHHHHCT----TSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECC
T ss_pred cceEEEEEccCC-CCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHHCc---CEecCCChHHEEEcCCCCEEEEe
Confidence 5799999998 6888888743 235899999999999999999999998 99999999999999999999999
Q ss_pred cCCCCCCCCCC---CCCCCCcccCcccccc-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcc
Q 005693 533 FGLTPLMNVPA---TPSRSAGYRAPEVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEW 608 (682)
Q Consensus 533 fGla~~~~~~~---~~~~~~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~ 608 (682)
||+++...... ...+++.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+ ....+.....
T Consensus 178 fg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~------~~~~i~~~~~ 251 (362)
T 3pg1_A 178 FNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYN------QLNKIVEVVG 251 (362)
T ss_dssp TTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH------HHHHHHHHHC
T ss_pred cCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHH------HHHHHHHHcC
Confidence 99997544332 3457888999999877 678999999999999999999999998643211 1111110000
Q ss_pred c---c-----------ccchhhhccc--c----ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 609 T---A-----------EVFDVELMRF--Q----NIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 609 ~---~-----------~~~d~~l~~~--~----~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
. . +......... . ........+.+++.+||+.||++|||++|++++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 252 TPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp CCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred CCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 0 0 0000000000 0 001123456788889999999999999999984
No 217
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=3.5e-36 Score=312.77 Aligned_cols=242 Identities=19% Similarity=0.354 Sum_probs=193.8
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeecccc----------ChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEE
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV----------GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLL 458 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~----------~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~l 458 (682)
.+.||+|+||.||+|... +++.||+|++..... ..+.+.+|++++.++.+||||+++++++..++..++
T Consensus 22 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~l 101 (298)
T 1phk_A 22 KEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFL 101 (298)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred eeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCCeEEE
Confidence 468999999999999986 478899999875421 134577899999999669999999999999999999
Q ss_pred EEeeccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCC
Q 005693 459 VYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPL 538 (682)
Q Consensus 459 V~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~ 538 (682)
||||+++|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++..
T Consensus 102 v~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~ 173 (298)
T 1phk_A 102 VFDLMKKGELFDYLTEK-----VTLSEKETRKIMRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGFSCQ 173 (298)
T ss_dssp EEECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EEeccCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEEcCCCcEEEecccchhh
Confidence 99999999999999743 34899999999999999999999998 99999999999999999999999999876
Q ss_pred CCCCC---CCCCCCcccCccccc------cCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccc
Q 005693 539 MNVPA---TPSRSAGYRAPEVIE------TRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWT 609 (682)
Q Consensus 539 ~~~~~---~~~~~~~y~aPE~~~------~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~ 609 (682)
..... ...+++.|+|||++. ...++.++||||||+++|||++|+.||..... .............
T Consensus 174 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~------~~~~~~~~~~~~~ 247 (298)
T 1phk_A 174 LDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ------MLMLRMIMSGNYQ 247 (298)
T ss_dssp CCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHTCCC
T ss_pred cCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccH------HHHHHHHhcCCcc
Confidence 54332 345788999999985 45678999999999999999999999975431 1111222211111
Q ss_pred cccchhhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005693 610 AEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVR 653 (682)
Q Consensus 610 ~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 653 (682)
.. . .........+.+++.+||+.||++|||++|+++
T Consensus 248 ~~--~------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 248 FG--S------PEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp CC--T------TTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred cC--c------ccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 00 0 011123345677888999999999999999986
No 218
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=1.3e-36 Score=323.62 Aligned_cols=254 Identities=17% Similarity=0.278 Sum_probs=193.5
Q ss_pred hccccccCeEEEEEEEEcC-C-ceEEEEEeeccccChhhHHHHHHHHHHhcCCCc------eeceEEEEEecCceEEEEe
Q 005693 390 AEVLGKGSYGTAYKAVLEE-S-TTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPN------VVPLRAYYYSKDEKLLVYD 461 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~-~-~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~n------iv~l~~~~~~~~~~~lV~e 461 (682)
.+.||+|+||.||+|.... + +.||+|+++......+.+.+|++++.++ +|++ ++.+++++...+..++|||
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~~~~~~~~~~~~~~~~~~~~~~~~~lv~e 102 (355)
T 2eu9_A 24 VGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKI-KEKDKENKFLCVLMSDWFNFHGHMCIAFE 102 (355)
T ss_dssp EEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHH-HHHCTTSCSCBCCEEEEEEETTEEEEEEE
T ss_pred EEEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHH-hhcCCCCceeEEEeeeeeeeCCeEEEEEe
Confidence 4689999999999999753 3 5799999976544456788899999888 5544 9999999999999999999
Q ss_pred eccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEe-------------------
Q 005693 462 YFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLI------------------- 522 (682)
Q Consensus 462 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl------------------- 522 (682)
|+ ++++.+++.... ...+++..+..++.||+.||+|||+.+ |+||||||+|||+
T Consensus 103 ~~-~~~l~~~l~~~~---~~~~~~~~~~~i~~qi~~~L~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~ 175 (355)
T 2eu9_A 103 LL-GKNTFEFLKENN---FQPYPLPHVRHMAYQLCHALRFLHENQ---LTHTDLKPENILFVNSEFETLYNEHKSCEEKS 175 (355)
T ss_dssp CC-CCBHHHHHHHTT---TCCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEESCCCEEEEECCC-CCCEEE
T ss_pred cc-CCChHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEecccccccccccccccccc
Confidence 99 667777776432 234899999999999999999999998 9999999999999
Q ss_pred cCCCCeEEeecCCCCCCCCC-CCCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHH
Q 005693 523 NQDLDGCISDFGLTPLMNVP-ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQ 601 (682)
Q Consensus 523 ~~~~~~kl~DfGla~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~ 601 (682)
+.++.+||+|||+++..... ....+|+.|+|||++.+..++.++|||||||++|||++|+.||......+.. ....
T Consensus 176 ~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~---~~~~ 252 (355)
T 2eu9_A 176 VKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHL---VMME 252 (355)
T ss_dssp ESCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH---HHHH
T ss_pred cCCCcEEEeecCccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHH---HHHH
Confidence 66789999999999765443 3446889999999999999999999999999999999999999864422111 1111
Q ss_pred HHhhh---ccc-----ccc-------ch--------------hhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 005693 602 SVVRE---EWT-----AEV-------FD--------------VELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVV 652 (682)
Q Consensus 602 ~~~~~---~~~-----~~~-------~d--------------~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl 652 (682)
..... .+. ... ++ ...........+...+.+++.+||+.||++|||++|++
T Consensus 253 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l 332 (355)
T 2eu9_A 253 KILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEAL 332 (355)
T ss_dssp HHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHT
T ss_pred HHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHh
Confidence 11000 000 000 00 00000011123455788899999999999999999998
Q ss_pred HH
Q 005693 653 RM 654 (682)
Q Consensus 653 ~~ 654 (682)
++
T Consensus 333 ~h 334 (355)
T 2eu9_A 333 LH 334 (355)
T ss_dssp TS
T ss_pred cC
Confidence 63
No 219
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=1.9e-36 Score=318.87 Aligned_cols=252 Identities=21% Similarity=0.312 Sum_probs=192.7
Q ss_pred hccccccCeEEEEEEEEc--CCceEEEEEeecccc---ChhhHHHHHHHHHHhc--CCCceeceEEEEE-----ecCceE
Q 005693 390 AEVLGKGSYGTAYKAVLE--ESTTVVVKRLKEVVV---GKRDFEQQMEIVGRVG--QHPNVVPLRAYYY-----SKDEKL 457 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~--~~~~vavK~l~~~~~---~~~~~~~e~~~l~~l~--~h~niv~l~~~~~-----~~~~~~ 457 (682)
.+.||+|+||.||+|... +++.||+|+++.... ....+.+|+.++..+. +||||+++++++. .....+
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~ 95 (326)
T 1blx_A 16 VAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLT 95 (326)
T ss_dssp EEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEE
T ss_pred eeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCCceEE
Confidence 468999999999999983 577899999875432 2346778888887764 7999999999987 456789
Q ss_pred EEEeeccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCC
Q 005693 458 LVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTP 537 (682)
Q Consensus 458 lV~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~ 537 (682)
+||||++ |+|.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++
T Consensus 96 lv~e~~~-~~L~~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~g---i~H~dlkp~Nili~~~~~~kl~Dfg~~~ 168 (326)
T 1blx_A 96 LVFEHVD-QDLTTYLDKVP---EPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLAR 168 (326)
T ss_dssp EEEECCS-CBHHHHHHHSC---TTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECSCCSCC
T ss_pred EEEecCC-CCHHHHHHhcc---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCHHHeEEcCCCCEEEecCcccc
Confidence 9999998 69999997543 234899999999999999999999998 9999999999999999999999999997
Q ss_pred CCCCC---CCCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhh-------hc
Q 005693 538 LMNVP---ATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVR-------EE 607 (682)
Q Consensus 538 ~~~~~---~~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~-------~~ 607 (682)
..... ....+++.|+|||++.+..++.++||||||+++|||++|+.||.+....+ ....+.. ..
T Consensus 169 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~------~~~~i~~~~~~~~~~~ 242 (326)
T 1blx_A 169 IYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD------QLGKILDVIGLPGEED 242 (326)
T ss_dssp CCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH------HHHHHHHHHCCCCGGG
T ss_pred cccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHH------HHHHHHHHcCCCCccc
Confidence 76532 23457889999999999999999999999999999999999998653211 1111111 11
Q ss_pred cccccchh--hhc------cccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 608 WTAEVFDV--ELM------RFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 608 ~~~~~~d~--~l~------~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
|......+ ... ...........+.+++.+||+.||++|||++|++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 297 (326)
T 1blx_A 243 WPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 297 (326)
T ss_dssp SCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred CccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 11100000 000 000011223456677889999999999999999963
No 220
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=1.7e-36 Score=328.22 Aligned_cols=257 Identities=24% Similarity=0.375 Sum_probs=188.5
Q ss_pred hccccccCeEEEEEEEEcCCceEEEEEeeccccChhhHHHHHHHHHHhcCCCceeceEEEEEecCc------eEEEEeec
Q 005693 390 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDE------KLLVYDYF 463 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~------~~lV~e~~ 463 (682)
.+.||+|+||.||+|+..++..+|+|++.... ....+|+++++.+ +||||+++++++..... .++||||+
T Consensus 45 ~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~---~~~~~E~~il~~l-~h~niv~l~~~~~~~~~~~~~~~~~lv~e~~ 120 (394)
T 4e7w_A 45 CKVIGNGSFGVVFQAKLVESDEVAIKKVLQDK---RFKNRELQIMRIV-KHPNVVDLKAFFYSNGDKKDEVFLNLVLEYV 120 (394)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEEECCT---TSCCHHHHHHHTC-CCTTBCCEEEEEEEESSSSSCEEEEEEEECC
T ss_pred eEEEeeCCCeEEEEEEECCCCeEEEEEEecCc---chHHHHHHHHHhC-CCCCcceEEEEEEecCCCCCceEEEEEeecc
Confidence 47899999999999999888889999986532 2334689999998 99999999999976543 78999999
Q ss_pred cCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEec-CCCCeEEeecCCCCCCCCC
Q 005693 464 ASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLIN-QDLDGCISDFGLTPLMNVP 542 (682)
Q Consensus 464 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~-~~~~~kl~DfGla~~~~~~ 542 (682)
+++.+........ ....+++..+..++.|++.||+|||+.+ |+||||||+|||++ .++.+||+|||+++.....
T Consensus 121 ~~~l~~~~~~~~~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~ 195 (394)
T 4e7w_A 121 PETVYRASRHYAK--LKQTMPMLLIKLYMYQLLRSLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAG 195 (394)
T ss_dssp SEEHHHHHHHHHH--TTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCTTCEECCTT
T ss_pred CccHHHHHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCC
Confidence 8754433332111 1234899999999999999999999998 99999999999999 7999999999999765432
Q ss_pred ---CCCCCCCcccCccccccC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHH----------hhhcc
Q 005693 543 ---ATPSRSAGYRAPEVIETR-KHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSV----------VREEW 608 (682)
Q Consensus 543 ---~~~~~~~~y~aPE~~~~~-~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~----------~~~~~ 608 (682)
....+|+.|+|||++.+. .++.++||||+||++|||++|+.||.+....+. +....... ....+
T Consensus 196 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~--l~~i~~~~g~p~~~~~~~~~~~~ 273 (394)
T 4e7w_A 196 EPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQ--LVEIIKVLGTPSREQIKTMNPNY 273 (394)
T ss_dssp CCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHHHHCCCCHHHHHHHCGGG
T ss_pred CCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHHhCCCCHHHHHhhChhh
Confidence 234578899999998765 589999999999999999999999986542211 11111100 00000
Q ss_pred ccccchhhhccccChH-----HHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHHhh
Q 005693 609 TAEVFDVELMRFQNIE-----EEMVQMLQIGMACVAKVPDMRPNMDEVVRM--IEEVR 659 (682)
Q Consensus 609 ~~~~~d~~l~~~~~~~-----~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~--L~~i~ 659 (682)
....+. .. ...... .....+.+++.+||+.||++|||+.|++++ ++++.
T Consensus 274 ~~~~~~-~~-~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 329 (394)
T 4e7w_A 274 MEHKFP-QI-RPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELR 329 (394)
T ss_dssp SSSCCC-CC-CCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTTT
T ss_pred hhhccc-cc-cCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhhc
Confidence 000000 00 000001 123467788889999999999999999984 55544
No 221
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=1.3e-36 Score=325.77 Aligned_cols=251 Identities=21% Similarity=0.308 Sum_probs=190.2
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeecccc--ChhhHHHHHHHHHHhcCCCceeceEEEEEec-----CceEEEEe
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSK-----DEKLLVYD 461 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~-----~~~~lV~e 461 (682)
.+.||+|+||.||+|... +++.||+|++..... ..+.+.+|++++.++ +||||+++++++... ...++|||
T Consensus 32 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~iv~e 110 (364)
T 3qyz_A 32 LSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQD 110 (364)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHC-CCTTBCCCCEEECCSSTTTCCCEEEEEE
T ss_pred EEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhc-CCCCCccceeEEecCCccccceEEEEEc
Confidence 468999999999999976 467899999975332 235688999999999 899999999999765 36799999
Q ss_pred eccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCC
Q 005693 462 YFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV 541 (682)
Q Consensus 462 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~ 541 (682)
|++ |+|.+++... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.....
T Consensus 111 ~~~-~~L~~~l~~~------~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~ 180 (364)
T 3qyz_A 111 LME-TDLYKLLKTQ------HLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADP 180 (364)
T ss_dssp CCS-EEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECCG
T ss_pred ccC-cCHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCChHhEEECCCCCEEEEeCcceEecCC
Confidence 997 5999998642 3899999999999999999999998 99999999999999999999999999976542
Q ss_pred C-------CCCCCCCcccCcccccc-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcc---cc
Q 005693 542 P-------ATPSRSAGYRAPEVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEW---TA 610 (682)
Q Consensus 542 ~-------~~~~~~~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~---~~ 610 (682)
. ....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+.. ........... ..
T Consensus 181 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~---~~i~~~~~~~~~~~~~ 257 (364)
T 3qyz_A 181 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL---NHILGILGSPSQEDLN 257 (364)
T ss_dssp GGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHH---HHHHHHHCSCCHHHHH
T ss_pred CCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHH---HHHHHHhCCCCHHHHH
Confidence 2 23467899999998754 45899999999999999999999999865433221 11111100000 00
Q ss_pred ccch-------hhhc--cccC----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 611 EVFD-------VELM--RFQN----IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 611 ~~~d-------~~l~--~~~~----~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
...+ .... .... .......+.+++.+||+.||++|||++|++++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 258 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp TCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0000 0000 0000 01123456788889999999999999999984
No 222
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=1.4e-36 Score=323.09 Aligned_cols=252 Identities=16% Similarity=0.253 Sum_probs=195.8
Q ss_pred hccccccCeEEEEEEEEcCCceEEEEEeeccccCh------------------hhHHHHHHHHHHhcCCCceeceEEEEE
Q 005693 390 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGK------------------RDFEQQMEIVGRVGQHPNVVPLRAYYY 451 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~------------------~~~~~e~~~l~~l~~h~niv~l~~~~~ 451 (682)
.+.||+|+||.||+|.. +++.||+|++....... +.+.+|++++.++ +||||+++++++.
T Consensus 36 ~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~ 113 (348)
T 2pml_X 36 IRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDI-KNEYCLTCEGIIT 113 (348)
T ss_dssp EEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTC-CCTTBCCCSEEEE
T ss_pred EEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhC-CCCCcceEEEEEe
Confidence 46899999999999999 78999999997543221 7789999999999 8999999999999
Q ss_pred ecCceEEEEeeccCCchhHh------hccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCcEecCCCCCCeEecC
Q 005693 452 SKDEKLLVYDYFASGSLSTL------LHGNRGAGRTPLDWETRVKILLGTARGVAHIHS-MGGPKFTHGNIKASNVLINQ 524 (682)
Q Consensus 452 ~~~~~~lV~e~~~~g~L~~~------l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~-~~~~~ivHrDLk~~NILl~~ 524 (682)
+.+..++||||+++|+|.++ +... ....+++..+..++.|++.||+|||+ .+ |+||||||+||+++.
T Consensus 114 ~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~~~---i~H~dl~p~Nil~~~ 187 (348)
T 2pml_X 114 NYDEVYIIYEYMENDSILKFDEYFFVLDKN---YTCFIPIQVIKCIIKSVLNSFSYIHNEKN---ICHRDVKPSNILMDK 187 (348)
T ss_dssp SSSEEEEEEECCTTCBSSEESSSEESSCSS---SCCCCCHHHHHHHHHHHHHHHHHHHHTSC---EECCCCCGGGEEECT
T ss_pred eCCeEEEEEeccCCCcHHHHHHHhhhhhhc---cccCCCHHHHHHHHHHHHHHHHHHhccCC---EeecCCChHhEEEcC
Confidence 99999999999999999999 5432 13459999999999999999999999 87 999999999999999
Q ss_pred CCCeEEeecCCCCCCCCC--CCCCCCCcccCccccccC-CCCC-cchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHH
Q 005693 525 DLDGCISDFGLTPLMNVP--ATPSRSAGYRAPEVIETR-KHSH-KSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWV 600 (682)
Q Consensus 525 ~~~~kl~DfGla~~~~~~--~~~~~~~~y~aPE~~~~~-~~~~-~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~ 600 (682)
++.+||+|||.+...... ....+++.|+|||++.+. .++. ++||||||+++|||++|+.||...... ....
T Consensus 188 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~~~ 262 (348)
T 2pml_X 188 NGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL-----VELF 262 (348)
T ss_dssp TSCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS-----HHHH
T ss_pred CCcEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH-----HHHH
Confidence 999999999999765332 344578899999999887 5666 999999999999999999999864421 1112
Q ss_pred HHHhhhcccccc----chhhhcc---ccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 601 QSVVREEWTAEV----FDVELMR---FQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 601 ~~~~~~~~~~~~----~d~~l~~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
..+......... ....... ..........+.+++.+||+.||++|||++|++++
T Consensus 263 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~h 323 (348)
T 2pml_X 263 NNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH 323 (348)
T ss_dssp HHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 222111110000 0000000 00001223456778889999999999999999873
No 223
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=1.3e-36 Score=333.54 Aligned_cols=245 Identities=23% Similarity=0.363 Sum_probs=184.2
Q ss_pred hccccccCeEEEEEEEEcCCceEEEEEeeccccChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccCCchh
Q 005693 390 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLS 469 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~L~ 469 (682)
.+.||+|+||+||.+...+++.||||++.... .+.+.+|++++.++.+||||+++++++.+++..++||||++ |+|.
T Consensus 20 ~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~--~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gsL~ 96 (434)
T 2rio_A 20 EKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF--CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LNLQ 96 (434)
T ss_dssp EEEEEECSTTCEEEEEESSSSEEEEEEEEGGG--HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EEHH
T ss_pred cCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH--HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CCHH
Confidence 46799999999987777779999999986532 35678899999887789999999999999999999999996 6999
Q ss_pred HhhccCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCC-------------CCeEEeecC
Q 005693 470 TLLHGNRGAGR--TPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQD-------------LDGCISDFG 534 (682)
Q Consensus 470 ~~l~~~~~~~~--~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~-------------~~~kl~DfG 534 (682)
+++........ ...++..++.++.||+.||+|||+.+ |+||||||+|||++.+ +.+||+|||
T Consensus 97 ~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG 173 (434)
T 2rio_A 97 DLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 173 (434)
T ss_dssp HHHHTC------------CCHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCT
T ss_pred HHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEecCcccccccccCCCceEEEEcccc
Confidence 99975432111 11233456789999999999999998 9999999999999754 489999999
Q ss_pred CCCCCCCCC--------CCCCCCcccCcccccc-------CCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhH
Q 005693 535 LTPLMNVPA--------TPSRSAGYRAPEVIET-------RKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPR 598 (682)
Q Consensus 535 la~~~~~~~--------~~~~~~~y~aPE~~~~-------~~~~~~sDvwS~Gvvl~ellt-g~~Pf~~~~~~~~~~l~~ 598 (682)
+++...... ...||+.|+|||++.+ ..++.++|||||||++|||+| |+.||......+
T Consensus 174 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~------ 247 (434)
T 2rio_A 174 LCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE------ 247 (434)
T ss_dssp TCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH------
T ss_pred cceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH------
Confidence 998765432 2357899999999975 568999999999999999999 999997432111
Q ss_pred HHHHHhhhccccccchhhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005693 599 WVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVR 653 (682)
Q Consensus 599 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 653 (682)
..+.......... ...........+.+++.+||+.||++|||++|+++
T Consensus 248 --~~i~~~~~~~~~~-----~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 248 --SNIIRGIFSLDEM-----KCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp --HHHHHTCCCCCCC-----TTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred --HHHhcCCCCcccc-----cccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 1111111110000 11112344567788889999999999999999986
No 224
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=3e-37 Score=324.11 Aligned_cols=246 Identities=20% Similarity=0.325 Sum_probs=189.1
Q ss_pred hccccccCeEEEEEEEEcCCceEEEEEeecccc---ChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccCC
Q 005693 390 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVV---GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 466 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~---~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g 466 (682)
.+.||+|+||.||+|...+ .+|+|+++.... ..+.+.+|+.++.++ +|+||+++++++.+.+..++||||++++
T Consensus 38 ~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~iv~e~~~~~ 114 (319)
T 2y4i_B 38 GELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQT-RHENVVLFMGACMSPPHLAIITSLCKGR 114 (319)
T ss_dssp CCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTC-CCTTBCCCCEEEECSSCEEEECBCCCSE
T ss_pred eeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcC-CCCCEeEEEEEEecCCceEEEeecccCC
Confidence 5789999999999998764 599999875432 235677899999998 8999999999999999999999999999
Q ss_pred chhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCC----
Q 005693 467 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP---- 542 (682)
Q Consensus 467 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~---- 542 (682)
+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++ ++.+||+|||+++.....
T Consensus 115 ~L~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~ 186 (319)
T 2y4i_B 115 TLYSVVRDAK----IVLDVNKTRQIAQEIVKGMGYLHAKG---ILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGR 186 (319)
T ss_dssp EHHHHTTSSC----CCCCSHHHHHHHHHHHHHHHHHHHTT---CCCCCCCSTTEEEC---CCEECCCSCCC---------
T ss_pred cHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCChhhEEEe-CCCEEEeecCCccccccccccc
Confidence 9999997532 34889999999999999999999998 99999999999998 679999999998654321
Q ss_pred -----CCCCCCCcccCcccccc---------CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcc
Q 005693 543 -----ATPSRSAGYRAPEVIET---------RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEW 608 (682)
Q Consensus 543 -----~~~~~~~~y~aPE~~~~---------~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~ 608 (682)
....+++.|+|||++.. ..++.++||||||+++|||++|+.||...... ........ ..
T Consensus 187 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~------~~~~~~~~-~~ 259 (319)
T 2y4i_B 187 REDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAE------AIIWQMGT-GM 259 (319)
T ss_dssp -CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHH------HHHHHHHT-TC
T ss_pred cccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHhcc-CC
Confidence 12236788999999864 34788999999999999999999999754321 11111111 11
Q ss_pred ccccchhhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcC
Q 005693 609 TAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSD 662 (682)
Q Consensus 609 ~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~~ 662 (682)
...... .. ....+.+++.+||+.||++|||++|+++.|+++....
T Consensus 260 ~~~~~~------~~---~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~ 304 (319)
T 2y4i_B 260 KPNLSQ------IG---MGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRN 304 (319)
T ss_dssp CCCCCC------SS---CCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC----
T ss_pred CCCCCc------CC---CCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhh
Confidence 111100 01 1234667888999999999999999999999988654
No 225
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=3.2e-37 Score=321.08 Aligned_cols=253 Identities=24% Similarity=0.388 Sum_probs=178.1
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeeccc--cChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccCC
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV--VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 466 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g 466 (682)
.+.||+|+||.||+|... +++.||+|++.... ...+++.+|++++.++ +||||+++++++..++..++||||+++|
T Consensus 20 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 98 (303)
T 2vwi_A 20 QEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQC-HHPNIVSYYTSFVVKDELWLVMKLLSGG 98 (303)
T ss_dssp EEECC---CCCEEEEEC----CEEEEECCC----------------CCCCC-CCTTBCCEEEEEESSSCEEEEEECCTTC
T ss_pred hheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhc-CCCCEeeEEEEEeecCCcEEEehhccCC
Confidence 478999999999999854 57889999986542 2345678888888888 8999999999999999999999999999
Q ss_pred chhHhhccCC---CCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCC-
Q 005693 467 SLSTLLHGNR---GAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVP- 542 (682)
Q Consensus 467 ~L~~~l~~~~---~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~- 542 (682)
+|.+++.... ......+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 99 ~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 175 (303)
T 2vwi_A 99 SVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG---QIHRDVKAGNILLGEDGSVQIADFGVSAFLATGG 175 (303)
T ss_dssp BHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTCCEEECCCHHHHHCC---
T ss_pred chHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCC---CCCCCCChhhEEEcCCCCEEEEeccchheeccCC
Confidence 9999986421 112345899999999999999999999998 999999999999999999999999988654322
Q ss_pred --------CCCCCCCcccCcccccc-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccc
Q 005693 543 --------ATPSRSAGYRAPEVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 613 (682)
Q Consensus 543 --------~~~~~~~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 613 (682)
....+++.|+|||++.+ ..++.++||||||+++|||++|+.||......+. .......... ..
T Consensus 176 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~------~~~~~~~~~~-~~- 247 (303)
T 2vwi_A 176 DITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKV------LMLTLQNDPP-SL- 247 (303)
T ss_dssp ------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGH------HHHHHTSSCC-CT-
T ss_pred CccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhH------HHHHhccCCC-cc-
Confidence 22357889999999876 5689999999999999999999999976432211 1111111100 00
Q ss_pred hhhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 614 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 614 d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
................+.+++.+||+.||++|||++|++++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 248 ETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp TC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred ccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 00000000011122356778889999999999999999873
No 226
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=2.7e-36 Score=346.55 Aligned_cols=246 Identities=22% Similarity=0.353 Sum_probs=196.7
Q ss_pred hccccccCeEEEEEEEEcC----CceEEEEEeecccc--ChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeec
Q 005693 390 AEVLGKGSYGTAYKAVLEE----STTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYF 463 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~----~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~ 463 (682)
.+.||+|+||.||+|.+.. +..||+|+++.... ..+.+.+|+.++.++ +||||+++++++. ++..++||||+
T Consensus 395 ~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~-~~~~~lv~E~~ 472 (656)
T 2j0j_A 395 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQF-DHPHIVKLIGVIT-ENPVWIIMELC 472 (656)
T ss_dssp EEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEC-SSSCEEEEECC
T ss_pred eeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEe-cCceEEEEEcC
Confidence 5789999999999999753 35689998865432 235788999999999 9999999999984 56789999999
Q ss_pred cCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCCC
Q 005693 464 ASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA 543 (682)
Q Consensus 464 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~ 543 (682)
++|+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 473 ~~g~L~~~l~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~ 545 (656)
T 2j0j_A 473 TLGELRSFLQVRK----FSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 545 (656)
T ss_dssp TTCBHHHHHHHTT----TTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCCCCCSCCC--
T ss_pred CCCcHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchHhEEEeCCCCEEEEecCCCeecCCCc
Confidence 9999999997432 34899999999999999999999998 9999999999999999999999999998765432
Q ss_pred C-----CCCCCcccCccccccCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhh
Q 005693 544 T-----PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVEL 617 (682)
Q Consensus 544 ~-----~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-g~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 617 (682)
. ..+++.|+|||++.+..++.++|||||||++|||++ |..||.+.... .....+..... ..
T Consensus 546 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~------~~~~~i~~~~~-~~------ 612 (656)
T 2j0j_A 546 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN------DVIGRIENGER-LP------ 612 (656)
T ss_dssp --------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH------HHHHHHHHTCC-CC------
T ss_pred ceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHH------HHHHHHHcCCC-CC------
Confidence 2 234678999999998899999999999999999997 99999754321 11111111110 00
Q ss_pred ccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 005693 618 MRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQS 661 (682)
Q Consensus 618 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~ 661 (682)
........+.+++.+||+.||++|||++|+++.|+++.+.
T Consensus 613 ----~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~ 652 (656)
T 2j0j_A 613 ----MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 652 (656)
T ss_dssp ----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ----CCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence 0112234567788899999999999999999999998754
No 227
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=1.4e-36 Score=331.68 Aligned_cols=259 Identities=24% Similarity=0.343 Sum_probs=187.4
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeeccccChhhHHHHHHHHHHhcCCCceeceEEEEEecC------ceEEEEee
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKD------EKLLVYDY 462 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~------~~~lV~e~ 462 (682)
.+.||+|+||.||+|+.. +++.||||++... .....+|+++++++ +||||+++++++.... ..++||||
T Consensus 59 ~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~---~~~~~~E~~il~~l-~hpniv~l~~~~~~~~~~~~~~~~~lv~e~ 134 (420)
T 1j1b_A 59 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD---KRFKNRELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDY 134 (420)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEECC---TTSCCHHHHHHHTC-CCTTBCCEEEEEEEEETTTTEEEEEEEEEC
T ss_pred eeEEeeCCCEEEEEEEECCCCcEEEEEEeccc---chhHHHHHHHHHHc-CCCCccceeeEEeccCCCCcceeEEeehhc
Confidence 478999999999999986 4789999998653 23345799999999 9999999999986432 25789999
Q ss_pred ccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCC-CCeEEeecCCCCCCCC
Q 005693 463 FASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQD-LDGCISDFGLTPLMNV 541 (682)
Q Consensus 463 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~-~~~kl~DfGla~~~~~ 541 (682)
+++ ++.+.+..... ....+++..+..++.||+.||+|||+.+ |+||||||+|||++.+ +.+||+|||+++....
T Consensus 135 ~~~-~l~~~~~~~~~-~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~ 209 (420)
T 1j1b_A 135 VPE-TVYRVARHYSR-AKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 209 (420)
T ss_dssp CCE-EHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred ccc-cHHHHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChhhEEEeCCCCeEEeccchhhhhccc
Confidence 986 66666543211 1345899999999999999999999998 9999999999999965 5689999999976543
Q ss_pred C---CCCCCCCcccCccccccC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhh---hcc---ccc
Q 005693 542 P---ATPSRSAGYRAPEVIETR-KHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVR---EEW---TAE 611 (682)
Q Consensus 542 ~---~~~~~~~~y~aPE~~~~~-~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~---~~~---~~~ 611 (682)
. ....+|+.|+|||++.+. .++.++|||||||++|||++|+.||.+....+ .+......... +.+ ...
T Consensus 210 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~--~l~~i~~~lg~p~~~~~~~~~~~ 287 (420)
T 1j1b_A 210 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD--QLVEIIKVLGTPTREQIREMNPN 287 (420)
T ss_dssp TCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHHHHCSCCHHHHHHHCSC
T ss_pred CCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHHhCCCCHHHHHhhChh
Confidence 2 234678999999999765 68999999999999999999999998653211 11111111000 000 000
Q ss_pred cchhhhcc--ccCh-----HHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHHHhh
Q 005693 612 VFDVELMR--FQNI-----EEEMVQMLQIGMACVAKVPDMRPNMDEVVR--MIEEVR 659 (682)
Q Consensus 612 ~~d~~l~~--~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~--~L~~i~ 659 (682)
..+..+.. .... ......+.+++.+||+.||++|||+.|+++ .++++.
T Consensus 288 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 344 (420)
T 1j1b_A 288 YTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 344 (420)
T ss_dssp CCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGG
T ss_pred hhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhcccc
Confidence 00000000 0000 112345778888999999999999999997 344443
No 228
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=1.7e-36 Score=321.55 Aligned_cols=245 Identities=22% Similarity=0.331 Sum_probs=189.0
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeeccccC--hhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccCC
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG--KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 466 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~--~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g 466 (682)
.+.||+|+||.||+|... +++.||||+++..... ..++..|+.++.+..+||||+++++++..++..++||||+++
T Consensus 56 ~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~- 134 (340)
T 3an0_A 56 IMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDT- 134 (340)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEECCCSE-
T ss_pred eeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEHHHhhC-
Confidence 467999999999999974 5788999999765433 344556666644545999999999999999999999999975
Q ss_pred chhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCCC--
Q 005693 467 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSM-GGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA-- 543 (682)
Q Consensus 467 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~-~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~-- 543 (682)
+|.+++..... ....+++..+..++.||+.||+|||++ + |+||||||+||+++.++.+||+|||+++......
T Consensus 135 ~L~~~l~~~~~-~~~~l~~~~~~~i~~qi~~~l~~lH~~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~ 210 (340)
T 3an0_A 135 SLDKFYKQVID-KGQTIPEDILGKIAVSIVKALEHLHSKLS---VIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAK 210 (340)
T ss_dssp EHHHHHHHHHH-TSCCCCHHHHHHHHHHHHHHHHHHHHHTC---CCCCSCCSTTEEECSTTCEEECCCSHHHHHSCHHHH
T ss_pred cHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeeCCCceeccccccc
Confidence 99888864211 123589999999999999999999987 7 9999999999999999999999999987654321
Q ss_pred -CCCCCCcccCccccc----cCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhc
Q 005693 544 -TPSRSAGYRAPEVIE----TRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELM 618 (682)
Q Consensus 544 -~~~~~~~y~aPE~~~----~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 618 (682)
...+++.|+|||++. ...++.++|||||||++|||++|+.||..... .............. ..
T Consensus 211 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~-----~~~~~~~~~~~~~~-~~------ 278 (340)
T 3an0_A 211 TIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGT-----PFQQLKQVVEEPSP-QL------ 278 (340)
T ss_dssp HHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSC-----HHHHHHHHHHSCCC-CC------
T ss_pred ccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccc-----hHHHHHHHhcCCCC-CC------
Confidence 235889999999964 34689999999999999999999999975321 11111222211110 00
Q ss_pred cccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 619 RFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 619 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
........+.+++.+||+.||++|||++|++++
T Consensus 279 ---~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 311 (340)
T 3an0_A 279 ---PADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 311 (340)
T ss_dssp ---CGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred ---CcccCCHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 001123457788889999999999999999984
No 229
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=6.4e-36 Score=319.56 Aligned_cols=263 Identities=21% Similarity=0.295 Sum_probs=182.5
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeeccccChhhHHHHHHHHHHhcCCCceeceEEEEEecCc-------eEEEEe
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDE-------KLLVYD 461 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~-------~~lV~e 461 (682)
.+.||+|+||.||+|... +++.||||++...........++++.+..+ +||||+++++++..... .++|||
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~~~lv~e 106 (360)
T 3e3p_A 28 ERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVL-HHPNIVQLQSYFYTLGERDRRDIYLNVVME 106 (360)
T ss_dssp C----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHH-CCTTBCCEEEEEEEECSSCTTCEEEEEEEE
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhc-CCCCcccHHHhhhccccccccceeEEEEee
Confidence 467999999999999985 578899999876555555677788888888 99999999999976544 789999
Q ss_pred eccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHH--hcCCCCcEecCCCCCCeEecC-CCCeEEeecCCCCC
Q 005693 462 YFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIH--SMGGPKFTHGNIKASNVLINQ-DLDGCISDFGLTPL 538 (682)
Q Consensus 462 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH--~~~~~~ivHrDLk~~NILl~~-~~~~kl~DfGla~~ 538 (682)
|+++ +|.+.+..... ....+++..+..++.|++.||.||| +.+ |+||||||+|||++. ++.+||+|||+++.
T Consensus 107 ~~~~-~l~~~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~~~---ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~ 181 (360)
T 3e3p_A 107 YVPD-TLHRCCRNYYR-RQVAPPPILIKVFLFQLIRSIGCLHLPSVN---VCHRDIKPHNVLVNEADGTLKLCDFGSAKK 181 (360)
T ss_dssp CCSC-BHHHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHTSTTTC---CBCSCCCGGGEEEETTTTEEEECCCTTCBC
T ss_pred cccc-cHHHHHHHHhh-cccCCCHHHHHHHHHHHHHHHHHHhCCCCC---eecCcCCHHHEEEeCCCCcEEEeeCCCcee
Confidence 9986 55444432111 2334889999999999999999999 877 999999999999997 89999999999987
Q ss_pred CCCCC---CCCCCCcccCccccccCC-CCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHH-----------HH
Q 005693 539 MNVPA---TPSRSAGYRAPEVIETRK-HSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQ-----------SV 603 (682)
Q Consensus 539 ~~~~~---~~~~~~~y~aPE~~~~~~-~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~-----------~~ 603 (682)
..... ...+|+.|+|||++.+.. ++.++|||||||++|||++|+.||.+....+. +..... ..
T Consensus 182 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 259 (360)
T 3e3p_A 182 LSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQ--LHEIVRVLGCPSREVLRKL 259 (360)
T ss_dssp CCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHHHHCCCCHHHHHHH
T ss_pred cCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHH--HHHHHHHcCCCCHHHHHhc
Confidence 65433 345788999999986654 89999999999999999999999986532211 111111 00
Q ss_pred hhhccccccchhhh-----ccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHHhhh
Q 005693 604 VREEWTAEVFDVEL-----MRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM--IEEVRQ 660 (682)
Q Consensus 604 ~~~~~~~~~~d~~l-----~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~--L~~i~~ 660 (682)
..........+... ............+.+++.+||+.||++|||++|++++ ++++..
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~ 323 (360)
T 3e3p_A 260 NPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELHD 323 (360)
T ss_dssp CTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGGC
T ss_pred ccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccccCC
Confidence 00000000000000 0000001134567788889999999999999999984 555543
No 230
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=8.6e-37 Score=327.29 Aligned_cols=251 Identities=21% Similarity=0.304 Sum_probs=174.7
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeeccccC---hhhHHHHHHHHHHhcCCCceeceEEEEEec------CceEEE
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSK------DEKLLV 459 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~------~~~~lV 459 (682)
.+.||+|+||.||+|... +++.||+|++...... .+.+.+|+++++.+ +||||+++++++... ...++|
T Consensus 34 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~~~~~~~lv 112 (367)
T 2fst_X 34 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLV 112 (367)
T ss_dssp EEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCSSGGGCCCCEEE
T ss_pred eeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEecCCccccCCeEEEE
Confidence 468999999999999965 5788999999754332 35677899999999 899999999999754 567999
Q ss_pred EeeccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCC
Q 005693 460 YDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM 539 (682)
Q Consensus 460 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~ 539 (682)
+||+ +++|.+++.. ..+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||+++..
T Consensus 113 ~e~~-~~~L~~~~~~------~~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~ 182 (367)
T 2fst_X 113 THLM-GADLNNIVKC------QKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHT 182 (367)
T ss_dssp EECC-CEECC-----------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECC-------
T ss_pred eccc-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHhhEEECCCCCEEEeeccccccc
Confidence 9999 6899998863 24899999999999999999999998 999999999999999999999999999876
Q ss_pred CCC-CCCCCCCcccCcccccc-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhh---ccccccch
Q 005693 540 NVP-ATPSRSAGYRAPEVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVRE---EWTAEVFD 614 (682)
Q Consensus 540 ~~~-~~~~~~~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~---~~~~~~~d 614 (682)
... ....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||.+....+. .......... .....+..
T Consensus 183 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~---l~~i~~~~g~p~~~~~~~~~~ 259 (367)
T 2fst_X 183 ADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ---LKLILRLVGTPGAELLKKISS 259 (367)
T ss_dssp --------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHHHHHHHCSCCHHHHTTCCC
T ss_pred cccCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHhCCCCHHHHHHhhh
Confidence 543 23467899999999877 6789999999999999999999999986532111 1111111000 00000000
Q ss_pred h-------hhcc--ccChH----HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 615 V-------ELMR--FQNIE----EEMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 615 ~-------~l~~--~~~~~----~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
. .+.. ..... .....+.+++.+||+.||++|||++|++++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 260 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp HHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 0 0000 00011 112456788889999999999999999984
No 231
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=1.4e-35 Score=310.82 Aligned_cols=242 Identities=20% Similarity=0.291 Sum_probs=188.8
Q ss_pred hccccccCeEEEEEEEEcCCceEEEEEeeccccC---hhhHHHHHHHHHHhcC-CCceeceEEEEEecCceEEEEeeccC
Q 005693 390 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQ-HPNVVPLRAYYYSKDEKLLVYDYFAS 465 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~-h~niv~l~~~~~~~~~~~lV~e~~~~ 465 (682)
.+.||+|+||.||++...+++.||+|++...... .+.+.+|++++.++.+ |+||+++++++..++..++||| +.+
T Consensus 33 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~~~ 111 (313)
T 3cek_A 33 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGN 111 (313)
T ss_dssp EEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEEC-CCS
T ss_pred EEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEEe-cCC
Confidence 4689999999999999888999999999754333 3568899999999954 7999999999999999999999 668
Q ss_pred CchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCCC--
Q 005693 466 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA-- 543 (682)
Q Consensus 466 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~-- 543 (682)
++|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||++++ +.+||+|||+++......
T Consensus 112 ~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~~~~ 182 (313)
T 3cek_A 112 IDLNSWLKKK-----KSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTS 182 (313)
T ss_dssp EEHHHHHHHC-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEET-TEEEECCCSSSCC-------
T ss_pred CcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcccEEEEC-CeEEEeeccccccccCcccc
Confidence 8999999753 24899999999999999999999998 999999999999965 899999999998764332
Q ss_pred ----CCCCCCcccCcccccc-----------CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhcc
Q 005693 544 ----TPSRSAGYRAPEVIET-----------RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEW 608 (682)
Q Consensus 544 ----~~~~~~~y~aPE~~~~-----------~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~ 608 (682)
...+++.|+|||++.+ ..++.++||||||+++|||++|+.||..... .............
T Consensus 183 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-----~~~~~~~~~~~~~ 257 (313)
T 3cek_A 183 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-----QISKLHAIIDPNH 257 (313)
T ss_dssp -------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCS-----HHHHHHHHHCTTS
T ss_pred ccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHH-----HHHHHHHHHhccc
Confidence 2357889999999875 4678899999999999999999999974321 1111222221111
Q ss_pred ccccchhhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 005693 609 TAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMIE 656 (682)
Q Consensus 609 ~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~ 656 (682)
... ..... ...+.+++.+||+.||++||+++|++++-.
T Consensus 258 ~~~-------~~~~~---~~~l~~li~~~l~~dp~~Rps~~ell~h~~ 295 (313)
T 3cek_A 258 EIE-------FPDIP---EKDLQDVLKCCLKRDPKQRISIPELLAHPY 295 (313)
T ss_dssp CCC-------CCCCS---CHHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred ccC-------Ccccc---hHHHHHHHHHHccCCcccCcCHHHHhcCcc
Confidence 100 01111 235667788999999999999999998543
No 232
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.8e-36 Score=325.50 Aligned_cols=259 Identities=22% Similarity=0.331 Sum_probs=188.6
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeeccccChhhHHHHHHHHHHhcCCCceeceEEEEEec---------------
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSK--------------- 453 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~--------------- 453 (682)
.+.||+|+||.||+|... +++.||+|++.... ....+|+++++.+ +||||+++++++...
T Consensus 12 ~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~ 87 (383)
T 3eb0_A 12 GKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP---RYKNRELDIMKVL-DHVNIIKLVDYFYTTGDEEPKPPQPPDDHN 87 (383)
T ss_dssp EEEEECC-CEEEEEEEETTTCCEEEEEEEECCT---TSCCHHHHHHTTC-CCTTBCCEEEEEEEC---------------
T ss_pred EEEEEeccCEEEEEEEECCCCCEEEEEEEecCc---chHHHHHHHHHHc-CCCCccchhheeeecCcccccccccccccc
Confidence 478999999999999974 57899999986542 3345789999998 999999999998543
Q ss_pred -----------------------CceEEEEeeccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCc
Q 005693 454 -----------------------DEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKF 510 (682)
Q Consensus 454 -----------------------~~~~lV~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~i 510 (682)
...++||||++ |+|.+.+..... ....+++..+..++.|++.||+|||+.+ |
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~g---i 162 (383)
T 3eb0_A 88 KLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIR-SGRSIPMNLISIYIYQLFRAVGFIHSLG---I 162 (383)
T ss_dssp ----------------------CCEEEEEECCCS-EEHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHTTT---E
T ss_pred cccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCc---C
Confidence 23789999998 488777753211 1235899999999999999999999998 9
Q ss_pred EecCCCCCCeEec-CCCCeEEeecCCCCCCCCC---CCCCCCCcccCccccccCC-CCCcchHHHHHHHHHHHHhCCCCC
Q 005693 511 THGNIKASNVLIN-QDLDGCISDFGLTPLMNVP---ATPSRSAGYRAPEVIETRK-HSHKSDVYSFGVLLLEMLTGKAPL 585 (682)
Q Consensus 511 vHrDLk~~NILl~-~~~~~kl~DfGla~~~~~~---~~~~~~~~y~aPE~~~~~~-~~~~sDvwS~Gvvl~elltg~~Pf 585 (682)
+||||||+||+++ .++.+||+|||+++..... ....+++.|+|||++.+.. ++.++||||+||++|||++|+.||
T Consensus 163 ~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf 242 (383)
T 3eb0_A 163 CHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLF 242 (383)
T ss_dssp ECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred ccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCC
Confidence 9999999999998 6889999999999765433 2345788999999987654 899999999999999999999999
Q ss_pred CCCCCCCCCChhHHHHHHhhhcccccc-------chhhhc--cccC-----hHHHHHHHHHHHHHcccCCCCCCCCHHHH
Q 005693 586 QSPTRDDMVDLPRWVQSVVREEWTAEV-------FDVELM--RFQN-----IEEEMVQMLQIGMACVAKVPDMRPNMDEV 651 (682)
Q Consensus 586 ~~~~~~~~~~l~~~~~~~~~~~~~~~~-------~d~~l~--~~~~-----~~~~~~~l~~l~~~Cl~~dP~~RPt~~ev 651 (682)
.+....+. +...... ........+ .+.... .... .......+.+++.+||+.||++|||++|+
T Consensus 243 ~~~~~~~~--~~~i~~~-~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~ 319 (383)
T 3eb0_A 243 SGETSIDQ--LVRIIQI-MGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEA 319 (383)
T ss_dssp CCSSHHHH--HHHHHHH-HCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHH
T ss_pred CCCChHHH--HHHHHHH-hCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHH
Confidence 86532211 1111110 000000000 000000 0000 01123456788889999999999999999
Q ss_pred HH--HHHHhhh
Q 005693 652 VR--MIEEVRQ 660 (682)
Q Consensus 652 l~--~L~~i~~ 660 (682)
++ .++++..
T Consensus 320 l~hp~f~~~~~ 330 (383)
T 3eb0_A 320 MAHPFFDHLRN 330 (383)
T ss_dssp HTSGGGHHHHH
T ss_pred hcCHHHHHHHh
Confidence 97 4555544
No 233
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=4.2e-36 Score=322.64 Aligned_cols=247 Identities=22% Similarity=0.332 Sum_probs=187.8
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeeccccC---hhhHHHHHHHHHHhcCCCceeceEEEEEecCce------EEE
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEK------LLV 459 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~------~lV 459 (682)
.+.||+|+||.||+|... +++.||+|++...... .+.+.+|+.++..+ +||||+++++++...+.. ++|
T Consensus 47 ~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~~lv 125 (371)
T 4exu_A 47 PTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHM-QHENVIGLLDVFTPASSLRNFYDFYLV 125 (371)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCSSSTTCCCCEEE
T ss_pred EeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhc-CCCCchhhhhheeccCCcccceeEEEE
Confidence 468999999999999975 4788999999765433 35678899999999 899999999999877655 999
Q ss_pred EeeccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCC
Q 005693 460 YDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM 539 (682)
Q Consensus 460 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~ 539 (682)
|||+. |+|.+++.. .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++..
T Consensus 126 ~e~~~-~~l~~~~~~-------~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~ 194 (371)
T 4exu_A 126 MPFMQ-TDLQKIMGM-------EFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHA 194 (371)
T ss_dssp EECCC-EEHHHHTTS-------CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECSTTCC---
T ss_pred Ecccc-ccHHHHhhc-------CCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCcCHHHeEECCCCCEEEEecCccccc
Confidence 99997 589888742 2899999999999999999999998 999999999999999999999999999876
Q ss_pred CCCC-CCCCCCcccCcccccc-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhh------ccccc
Q 005693 540 NVPA-TPSRSAGYRAPEVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVRE------EWTAE 611 (682)
Q Consensus 540 ~~~~-~~~~~~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~------~~~~~ 611 (682)
.... ...+|+.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+ ....+... .+...
T Consensus 195 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~------~~~~i~~~~~~~~~~~~~~ 268 (371)
T 4exu_A 195 DAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD------QLTQILKVTGVPGTEFVQK 268 (371)
T ss_dssp -----CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH------HHHHHHHHHCCCCHHHHTT
T ss_pred ccCcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHH------HHHHHHHHhCCCcHHHHHH
Confidence 5433 3467899999999987 678999999999999999999999998643211 11111110 00000
Q ss_pred cch-------hhhc--cccCh----HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 612 VFD-------VELM--RFQNI----EEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 612 ~~d-------~~l~--~~~~~----~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
..+ .... ..... ......+.+++.+||+.||++|||++|++++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 269 LNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp CSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 000 0000 00000 1123467788889999999999999999984
No 234
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=1.5e-35 Score=308.96 Aligned_cols=239 Identities=21% Similarity=0.342 Sum_probs=187.5
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeeccc-----cChhhHHHHHHHHHHhcCCCceeceEEEEE--ecCceEEEEe
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV-----VGKRDFEQQMEIVGRVGQHPNVVPLRAYYY--SKDEKLLVYD 461 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~-----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~--~~~~~~lV~e 461 (682)
.+.||+|+||.||++... +++.+|+|+++... ...+.+.+|++++.++ +||||+++++++. +....++|||
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~~lv~e 88 (305)
T 2wtk_C 10 GDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRL-RHKNVIQLVDVLYNEEKQKMYMVME 88 (305)
T ss_dssp CCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTC-CCTTBCCEEEEEECC---CEEEEEE
T ss_pred eeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhc-CCCCeeEEEEEEEcCCCCeEEEEeh
Confidence 468999999999999975 57789999997542 2246788999999999 8999999999985 4457899999
Q ss_pred eccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCC
Q 005693 462 YFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV 541 (682)
Q Consensus 462 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~ 541 (682)
|++++ |.+++.... ...+++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++.....
T Consensus 89 ~~~~~-l~~~~~~~~---~~~~~~~~~~~~~~qi~~al~~LH~~~---i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~ 161 (305)
T 2wtk_C 89 YCVCG-MQEMLDSVP---EKRFPVCQAHGYFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHP 161 (305)
T ss_dssp CCSEE-HHHHHHHST---TCSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECCT
T ss_pred hccCC-HHHHHHhCc---ccccCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCcccEEEcCCCcEEeeccccccccCc
Confidence 99876 777776433 234899999999999999999999998 99999999999999999999999999876542
Q ss_pred C------CCCCCCCcccCccccccCC--CCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccc
Q 005693 542 P------ATPSRSAGYRAPEVIETRK--HSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 613 (682)
Q Consensus 542 ~------~~~~~~~~y~aPE~~~~~~--~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 613 (682)
. ....+++.|+|||++.+.. ++.++||||||+++|||++|+.||.... .......+......
T Consensus 162 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~~~i~~~~~~---- 231 (305)
T 2wtk_C 162 FAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN------IYKLFENIGKGSYA---- 231 (305)
T ss_dssp TCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHHCCCC----
T ss_pred cccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCch------HHHHHHHHhcCCCC----
Confidence 2 2345788999999997644 3779999999999999999999997542 11222222111110
Q ss_pred hhhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 614 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 614 d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
... .....+.+++.+||+.||++|||++|++++
T Consensus 232 -----~~~---~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 232 -----IPG---DCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp -----CCS---SSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred -----CCC---ccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 011 123356677889999999999999999985
No 235
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=8e-36 Score=317.89 Aligned_cols=251 Identities=20% Similarity=0.267 Sum_probs=188.2
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeecccc--ChhhHHHHHHHHHHhcCCCceeceEEEEEec-----CceEEEEe
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSK-----DEKLLVYD 461 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~-----~~~~lV~e 461 (682)
.+.||+|+||.||+|... +++.||+|++..... ....+.+|++++.++ +||||+++++++... ...++|||
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~lv~e 94 (353)
T 2b9h_A 16 KSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHF-KHENIITIFNIQRPDSFENFNEVYIIQE 94 (353)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHC-CCTTBCCEEEECCCSCSTTCCCEEEEEC
T ss_pred eeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhC-cCCCcCCeeeeecccccCccceEEEEEe
Confidence 468999999999999976 578899999964322 234677899999999 899999999998754 57899999
Q ss_pred eccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCC
Q 005693 462 YFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNV 541 (682)
Q Consensus 462 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~ 541 (682)
|+. |+|.+++... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.....
T Consensus 95 ~~~-~~L~~~~~~~------~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~ 164 (353)
T 2b9h_A 95 LMQ-TDLHRVISTQ------MLSDDHIQYFIYQTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDE 164 (353)
T ss_dssp CCS-EEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTCEECC-
T ss_pred ccC-ccHHHHHhhc------CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEcCCCcEEEEeccccccccc
Confidence 997 5999998742 3899999999999999999999998 99999999999999999999999999976542
Q ss_pred C--------------CCCCCCCcccCcccccc-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhh
Q 005693 542 P--------------ATPSRSAGYRAPEVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVRE 606 (682)
Q Consensus 542 ~--------------~~~~~~~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~ 606 (682)
. ....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+. ..........
T Consensus 165 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~---~~~~~~~~~~ 241 (353)
T 2b9h_A 165 SAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQ---LLLIFGIIGT 241 (353)
T ss_dssp ---------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHHHHHHHCC
T ss_pred ccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHH---HHHHHHHhCC
Confidence 1 12356888999998764 6789999999999999999999999986532110 0000000000
Q ss_pred cc----ccccchh-------hhcc--ccC----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 607 EW----TAEVFDV-------ELMR--FQN----IEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 607 ~~----~~~~~d~-------~l~~--~~~----~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
.. ....... .+.. ... .......+.+++.+||+.||++|||++|++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (353)
T 2b9h_A 242 PHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306 (353)
T ss_dssp CCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred CchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 00 0000000 0000 000 01223456778889999999999999999983
No 236
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=1.3e-35 Score=306.90 Aligned_cols=241 Identities=21% Similarity=0.334 Sum_probs=192.6
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeecccc---ChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccC
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV---GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 465 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~ 465 (682)
.+.||+|+||.||+|... +++.||+|++..... ..+.+.+|++++.++ +||||+++++++.+.+..++||||+++
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~ 105 (287)
T 2wei_A 27 VCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL-DHPNIMKLFEILEDSSSFYIVGELYTG 105 (287)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred eEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhc-cCCCccEEEEEEeCCCeEEEEEEccCC
Confidence 578999999999999986 578899999975533 356788999999999 999999999999999999999999999
Q ss_pred CchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCC---CCeEEeecCCCCCCCCC
Q 005693 466 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQD---LDGCISDFGLTPLMNVP 542 (682)
Q Consensus 466 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~---~~~kl~DfGla~~~~~~ 542 (682)
++|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.+ +.+||+|||++......
T Consensus 106 ~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~ 177 (287)
T 2wei_A 106 GELFDEIIKR-----KRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN 177 (287)
T ss_dssp CBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCC
T ss_pred CCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCChhhEEEecCCCcccEEEeccCcceeecCC
Confidence 9999988643 24899999999999999999999998 9999999999999764 46999999998776543
Q ss_pred CCC---CCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhcc
Q 005693 543 ATP---SRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMR 619 (682)
Q Consensus 543 ~~~---~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 619 (682)
... .+++.|+|||.+.+ .++.++||||||+++|+|++|+.||.+.... .....+........ ...
T Consensus 178 ~~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~------~~~~~~~~~~~~~~-----~~~ 245 (287)
T 2wei_A 178 TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY------DILKRVETGKYAFD-----LPQ 245 (287)
T ss_dssp SSCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHCCCCCC-----SGG
T ss_pred CccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHH------HHHHHHHcCCCCCC-----chh
Confidence 322 25677999999875 4899999999999999999999999754321 11222221111100 011
Q ss_pred ccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 620 FQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 620 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
... ....+.+++.+||+.||++|||++|++++
T Consensus 246 ~~~---~~~~~~~li~~~l~~dp~~Rps~~ell~h 277 (287)
T 2wei_A 246 WRT---ISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (287)
T ss_dssp GTT---SCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred hhh---cCHHHHHHHHHHcccChhhCcCHHHHhcC
Confidence 111 23456677889999999999999999983
No 237
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=1.4e-35 Score=308.26 Aligned_cols=241 Identities=21% Similarity=0.357 Sum_probs=184.5
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeeccccChhhHHHHHHHHHHhcCCCceeceEEEEEe-------------cCc
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYS-------------KDE 455 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~-------------~~~ 455 (682)
.+.||+|+||.||+|+.. +++.||+|++.......+.+.+|++++.++ +||||+++++++.+ ...
T Consensus 11 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (303)
T 1zy4_A 11 IAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASL-NHQYVVRYYAAWLERRNFVKPMTAVKKKST 89 (303)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEECCCCCC------CEEE
T ss_pred hheeccCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhc-CchHHHHHHHHHHhhcchhhhhcccccCCc
Confidence 478999999999999975 678999999976544456788999999999 89999999999865 346
Q ss_pred eEEEEeeccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCC
Q 005693 456 KLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGL 535 (682)
Q Consensus 456 ~~lV~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGl 535 (682)
.++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~ 162 (303)
T 1zy4_A 90 LFIQMEYCENGTLYDLIHSEN----LNQQRDEYWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGL 162 (303)
T ss_dssp EEEEEECCCSCBHHHHHHHSC----GGGCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCCCC
T ss_pred eEEEEecCCCCCHHHhhhccc----cccchHHHHHHHHHHHHHHHHHHhCC---eecccCCHHhEEEcCCCCEEEeeCcc
Confidence 789999999999999997432 34788999999999999999999998 99999999999999999999999999
Q ss_pred CCCCCCC------------------CCCCCCCcccCccccccC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCCh
Q 005693 536 TPLMNVP------------------ATPSRSAGYRAPEVIETR-KHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDL 596 (682)
Q Consensus 536 a~~~~~~------------------~~~~~~~~y~aPE~~~~~-~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l 596 (682)
+...... ....+++.|+|||++.+. .++.++||||||+++|||++ ||.... +.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~-----~~ 234 (303)
T 1zy4_A 163 AKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGM-----ER 234 (303)
T ss_dssp CSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHH-----HH
T ss_pred hhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCch-----hH
Confidence 9765421 123467889999999764 68999999999999999998 553211 00
Q ss_pred hHHHHHHhhhccccccchhhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 597 PRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 597 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
............ .+... ........+.+++.+||+.||++|||++|++++
T Consensus 235 ~~~~~~~~~~~~---~~~~~-----~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 235 VNILKKLRSVSI---EFPPD-----FDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp HHHHHHHHSTTC---CCCTT-----CCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred HHHHHhcccccc---ccCcc-----ccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence 111111111000 00000 111223456778889999999999999999873
No 238
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=3.7e-36 Score=320.84 Aligned_cols=247 Identities=23% Similarity=0.327 Sum_probs=187.4
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeeccccC---hhhHHHHHHHHHHhcCCCceeceEEEEEecCc------eEEE
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDE------KLLV 459 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~------~~lV 459 (682)
.+.||+|+||.||+|... +++.||+|++...... .+.+.+|+.++..+ +||||+++++++..... .++|
T Consensus 29 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~~lv 107 (353)
T 3coi_A 29 PTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHM-QHENVIGLLDVFTPASSLRNFYDFYLV 107 (353)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCSSGGGCCCCEEE
T ss_pred eeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhc-CCCCcccHhheEecccccccceeEEEE
Confidence 467999999999999975 5788999999764333 34678899999999 89999999999987654 4999
Q ss_pred EeeccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCC
Q 005693 460 YDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM 539 (682)
Q Consensus 460 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~ 539 (682)
|||+. |+|.+++.. .+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||+++..
T Consensus 108 ~e~~~-~~l~~~~~~-------~~~~~~~~~i~~qi~~al~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 176 (353)
T 3coi_A 108 MPFMQ-TDLQKIMGL-------KFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHA 176 (353)
T ss_dssp EECCS-EEGGGTTTS-------CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTCCEEECSTTCTTC-
T ss_pred ecccc-CCHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEeECCCCcEEEeecccccCC
Confidence 99997 588888742 3899999999999999999999998 999999999999999999999999999876
Q ss_pred CCCC-CCCCCCcccCcccccc-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhh------ccccc
Q 005693 540 NVPA-TPSRSAGYRAPEVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVRE------EWTAE 611 (682)
Q Consensus 540 ~~~~-~~~~~~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~------~~~~~ 611 (682)
.... ...+++.|+|||++.+ ..++.++||||||+++|||++|+.||.+....+ ....+... .+...
T Consensus 177 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~------~~~~i~~~~~~~~~~~~~~ 250 (353)
T 3coi_A 177 DAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD------QLTQILKVTGVPGTEFVQK 250 (353)
T ss_dssp -------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHH------HHHHHHHHHCBCCHHHHTT
T ss_pred CCCccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHHHHhCCCCHHHHHH
Confidence 5432 3457889999999877 678999999999999999999999998643211 11111110 00000
Q ss_pred cchh-------hh-----cc-ccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 612 VFDV-------EL-----MR-FQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 612 ~~d~-------~l-----~~-~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
..+. .+ .. ..........+.+++.+|++.||++|||++|++++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 251 LNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp CSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 0000 00 00 00111234566778889999999999999999874
No 239
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=5.1e-36 Score=315.32 Aligned_cols=233 Identities=21% Similarity=0.379 Sum_probs=189.9
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeecccc-------ChhhHHHHHHHHHHhcC-CCceeceEEEEEecCceEEEE
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV-------GKRDFEQQMEIVGRVGQ-HPNVVPLRAYYYSKDEKLLVY 460 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-------~~~~~~~e~~~l~~l~~-h~niv~l~~~~~~~~~~~lV~ 460 (682)
.+.||+|+||.||+|... +++.||+|++..... ..+.+.+|+.++.++.+ |+||+++++++..++..++||
T Consensus 48 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~~~lv~ 127 (320)
T 3a99_A 48 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLIL 127 (320)
T ss_dssp EEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEEEEE
T ss_pred EEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCCcEEEEE
Confidence 478999999999999864 578899999976532 22567789999999953 799999999999999999999
Q ss_pred eeccC-CchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEec-CCCCeEEeecCCCCC
Q 005693 461 DYFAS-GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLIN-QDLDGCISDFGLTPL 538 (682)
Q Consensus 461 e~~~~-g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~-~~~~~kl~DfGla~~ 538 (682)
||+.+ ++|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++ +++.+||+|||+++.
T Consensus 128 e~~~~~~~L~~~l~~~-----~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~ 199 (320)
T 3a99_A 128 ERPEPVQDLFDFITER-----GALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGAL 199 (320)
T ss_dssp ECCSSEEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EcCCCCccHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cEeCCCCHHHEEEeCCCCCEEEeeCccccc
Confidence 99986 8999999742 24899999999999999999999998 99999999999999 789999999999976
Q ss_pred CCCCC--CCCCCCcccCccccccCCC-CCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchh
Q 005693 539 MNVPA--TPSRSAGYRAPEVIETRKH-SHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDV 615 (682)
Q Consensus 539 ~~~~~--~~~~~~~y~aPE~~~~~~~-~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 615 (682)
..... ...+++.|+|||++.+..+ +.++||||||+++|||++|+.||.... .......
T Consensus 200 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~------------~~~~~~~------- 260 (320)
T 3a99_A 200 LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------------EIIRGQV------- 260 (320)
T ss_dssp CCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------------HHHHCCC-------
T ss_pred cccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh------------hhhcccc-------
Confidence 65432 3457889999999987766 678999999999999999999996421 0011100
Q ss_pred hhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 616 ELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 616 ~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
...... ...+.+++.+||+.||++|||++|++++
T Consensus 261 --~~~~~~---~~~~~~li~~~l~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 261 --FFRQRV---SSECQHLIRWCLALRPSDRPTFEEIQNH 294 (320)
T ss_dssp --CCSSCC---CHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred --cccccC---CHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 001111 2346677789999999999999999874
No 240
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=1e-35 Score=313.74 Aligned_cols=249 Identities=22% Similarity=0.337 Sum_probs=171.1
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeecccc--ChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccCC
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASG 466 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g 466 (682)
.+.||+|+||.||+|... +++.||+|+++.... ...++..|+..+.+..+||||+++++++..++..++||||+++
T Consensus 27 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~~~~- 105 (327)
T 3aln_A 27 LGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMST- 105 (327)
T ss_dssp -CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEECCCSE-
T ss_pred hheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEeecCC-
Confidence 468999999999999985 578899999976432 2334556666455544999999999999999999999999985
Q ss_pred chhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCCC--
Q 005693 467 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSM-GGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA-- 543 (682)
Q Consensus 467 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~-~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~-- 543 (682)
+|.+++..........+++..+..++.|++.||.|||+. + |+||||||+||+++.++.+||+|||+++......
T Consensus 106 ~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~---ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 182 (327)
T 3aln_A 106 SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK---IIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAK 182 (327)
T ss_dssp EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHS---CCCSCCCGGGEEEETTTEEEECCCSSSCC-------
T ss_pred ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCC---EeECCCCHHHEEEcCCCCEEEccCCCceeccccccc
Confidence 888777532111234589999999999999999999998 8 9999999999999999999999999997764432
Q ss_pred -CCCCCCcccCcccc----ccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhc
Q 005693 544 -TPSRSAGYRAPEVI----ETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELM 618 (682)
Q Consensus 544 -~~~~~~~y~aPE~~----~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 618 (682)
...+++.|+|||++ .+..++.++||||||+++|||++|+.||........ ......... . +.+.
T Consensus 183 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-----~~~~~~~~~-~-----~~~~ 251 (327)
T 3aln_A 183 TRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFD-----QLTQVVKGD-P-----PQLS 251 (327)
T ss_dssp -----------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC------------CCCCCSC-C-----CCCC
T ss_pred ccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHH-----HHHHHhcCC-C-----CCCC
Confidence 23578889999998 456689999999999999999999999975431100 000000000 0 0000
Q ss_pred cccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 619 RFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 619 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
..........+.+++.+||+.||++|||++|++++
T Consensus 252 -~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 286 (327)
T 3aln_A 252 -NSEEREFSPSFINFVNLCLTKDESKRPKYKELLKH 286 (327)
T ss_dssp -CCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred -CcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence 00001123456778889999999999999999883
No 241
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=3.4e-36 Score=315.69 Aligned_cols=248 Identities=21% Similarity=0.302 Sum_probs=181.7
Q ss_pred hccccccCeEEEEEEEEcC-CceEEEEEeecccc-ChhhHHHHHHHHHHhcCCCceeceEEEEE--------------ec
Q 005693 390 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVVV-GKRDFEQQMEIVGRVGQHPNVVPLRAYYY--------------SK 453 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~--------------~~ 453 (682)
.+.||+|+||.||+|.... ++.||+|++..... ..+.+.+|++++.++ +||||+++++++. +.
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~~~~~~ 94 (320)
T 2i6l_A 16 LKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRL-DHDNIVKVFEILGPSGSQLTDDVGSLTEL 94 (320)
T ss_dssp EEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECTTSCBCCC----CCSC
T ss_pred EEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhc-CCCCeeEEEEecccccccccccccccccc
Confidence 4689999999999999875 78899999875432 245688999999999 9999999999874 34
Q ss_pred CceEEEEeeccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEec-CCCCeEEee
Q 005693 454 DEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLIN-QDLDGCISD 532 (682)
Q Consensus 454 ~~~~lV~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~-~~~~~kl~D 532 (682)
...++||||++ |+|.+++.. ..+++..+..++.|++.||+|||+.+ |+||||||+||+++ +++.+||+|
T Consensus 95 ~~~~lv~e~~~-~~L~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~kl~D 164 (320)
T 2i6l_A 95 NSVYIVQEYME-TDLANVLEQ------GPLLEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANLFINTEDLVLKIGD 164 (320)
T ss_dssp SEEEEEEECCS-EEHHHHHTT------CCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTTEEEECC
T ss_pred CceeEEeeccC-CCHHHHhhc------CCccHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCeEEEcc
Confidence 57799999998 699999963 24899999999999999999999998 99999999999997 567999999
Q ss_pred cCCCCCCCCCC-------CCCCCCcccCcccccc-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHh
Q 005693 533 FGLTPLMNVPA-------TPSRSAGYRAPEVIET-RKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVV 604 (682)
Q Consensus 533 fGla~~~~~~~-------~~~~~~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~ 604 (682)
||+++...... ...++..|+|||.+.+ ..++.++||||||+++|||++|+.||.+....+ ....+.
T Consensus 165 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~------~~~~~~ 238 (320)
T 2i6l_A 165 FGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELE------QMQLIL 238 (320)
T ss_dssp CTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHH
T ss_pred CccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHH------HHHHHH
Confidence 99998764321 1235778999998865 678999999999999999999999998653211 111111
Q ss_pred hhccc-------------cccchhhhccc-cCh----HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 605 REEWT-------------AEVFDVELMRF-QNI----EEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 605 ~~~~~-------------~~~~d~~l~~~-~~~----~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
..... ........... ... ......+.+++.+||+.||++|||++|++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 239 ESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp HHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred HhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence 10000 00000000000 000 1123456778889999999999999999884
No 242
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=9.1e-36 Score=326.06 Aligned_cols=239 Identities=21% Similarity=0.350 Sum_probs=180.9
Q ss_pred hccccccCeEEEEEEEEcCCceEEEEEeeccccChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccCCchh
Q 005693 390 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLS 469 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~L~ 469 (682)
.+.||+|+||+||.....+++.||||++.... ...+.+|++++..+.+||||+++++++.+.+..++||||+. |+|.
T Consensus 29 ~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~--~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~-g~L~ 105 (432)
T 3p23_A 29 KDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC--FSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA-ATLQ 105 (432)
T ss_dssp EEEEEECGGGCEEEEEESSSSEEEEEEECTTT--EEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS-EEHH
T ss_pred CCeeecCcCEEEEEEEEeCCeEEEEEEECHHH--HHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC-CCHH
Confidence 46899999999776666778999999986532 23467899999998789999999999999999999999996 5999
Q ss_pred HhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecC-----CCCeEEeecCCCCCCCCC--
Q 005693 470 TLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQ-----DLDGCISDFGLTPLMNVP-- 542 (682)
Q Consensus 470 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~-----~~~~kl~DfGla~~~~~~-- 542 (682)
+++..... ...+..+..++.||+.||+|||+.+ |+||||||+|||++. ...+||+|||+++.....
T Consensus 106 ~~l~~~~~----~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~ 178 (432)
T 3p23_A 106 EYVEQKDF----AHLGLEPITLLQQTTSGLAHLHSLN---IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRH 178 (432)
T ss_dssp HHHHSSSC----CCCSSCHHHHHHHHHHHHHHHHHTT---CCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-----
T ss_pred HHHHhcCC----CccchhHHHHHHHHHHHHHHHHHCc---CEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCc
Confidence 99975432 2444556789999999999999998 999999999999953 336789999999766432
Q ss_pred -----CCCCCCCcccCccccc---cCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhccccccc
Q 005693 543 -----ATPSRSAGYRAPEVIE---TRKHSHKSDVYSFGVLLLEMLT-GKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 613 (682)
Q Consensus 543 -----~~~~~~~~y~aPE~~~---~~~~~~~sDvwS~Gvvl~ellt-g~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 613 (682)
....||+.|+|||++. ...++.++|||||||++|||++ |..||...... ........ .....
T Consensus 179 ~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~-------~~~~~~~~-~~~~~- 249 (432)
T 3p23_A 179 SFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQR-------QANILLGA-CSLDC- 249 (432)
T ss_dssp -------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTH-------HHHHHTTC-CCCTT-
T ss_pred ceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHH-------HHHHHhcc-CCccc-
Confidence 2345899999999997 4567889999999999999999 99999643211 11111111 00000
Q ss_pred hhhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005693 614 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVR 653 (682)
Q Consensus 614 d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 653 (682)
..........+.+++.+||+.||++|||++|+++
T Consensus 250 ------~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 250 ------LHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp ------SCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ------cCccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 0111123344677888999999999999999985
No 243
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=1.1e-35 Score=311.93 Aligned_cols=241 Identities=18% Similarity=0.302 Sum_probs=170.0
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeeccccCh--hhHHHHHH-HHHHhcCCCceeceEEEEEecCceEEEEeeccC
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVGK--RDFEQQME-IVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFAS 465 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~--~~~~~e~~-~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~ 465 (682)
.+.||+|+||.||+|... +++.||+|++....... .++..|.. ++..+ +||||+++++++.+++..++||||+ +
T Consensus 30 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~i~~~~~~~~~~~~~~lv~e~~-~ 107 (318)
T 2dyl_A 30 LGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSH-DCPYIVQCFGTFITNTDVFIAMELM-G 107 (318)
T ss_dssp EEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTT-TCTTBCCEEEEEECSSEEEEEECCC-S
T ss_pred cceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhc-CCCceeeEEEEEecCCcEEEEEecc-C
Confidence 468999999999999986 57899999997653322 23333443 44455 9999999999999999999999999 4
Q ss_pred CchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCCC-
Q 005693 466 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSM-GGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPA- 543 (682)
Q Consensus 466 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~-~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~- 543 (682)
+.+..+.... ...+++..+..++.|++.||+|||+. + |+||||||+||+++.++.+||+|||++.......
T Consensus 108 ~~~~~l~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~ 180 (318)
T 2dyl_A 108 TCAEKLKKRM----QGPIPERILGKMTVAIVKALYYLKEKHG---VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKA 180 (318)
T ss_dssp EEHHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHHHHHC---CCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred CcHHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHHhhCC---EEeCCCCHHHEEECCCCCEEEEECCCchhccCCcc
Confidence 5555555422 23489999999999999999999995 7 9999999999999999999999999987654332
Q ss_pred --CCCCCCcccCccccc-----cCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhh
Q 005693 544 --TPSRSAGYRAPEVIE-----TRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVE 616 (682)
Q Consensus 544 --~~~~~~~y~aPE~~~-----~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 616 (682)
...+++.|+|||++. ...++.++||||||+++|||++|+.||..... .............. .
T Consensus 181 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----~~~~~~~~~~~~~~------~ 249 (318)
T 2dyl_A 181 KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKT-----DFEVLTKVLQEEPP------L 249 (318)
T ss_dssp ------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCS-----HHHHHHHHHHSCCC------C
T ss_pred ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCc-----cHHHHHHHhccCCC------C
Confidence 335788999999994 45688999999999999999999999975321 11122222221110 0
Q ss_pred hccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005693 617 LMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVR 653 (682)
Q Consensus 617 l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 653 (682)
...... ....+.+++.+||+.||++||+++|+++
T Consensus 250 ~~~~~~---~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 250 LPGHMG---FSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp CCSSSC---CCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred CCccCC---CCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 001111 2234667778999999999999999998
No 244
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=7e-35 Score=301.55 Aligned_cols=230 Identities=13% Similarity=0.099 Sum_probs=177.9
Q ss_pred hccccccCeEEEEEEEEcC-CceEEEEEeeccccCh----hhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeecc
Q 005693 390 AEVLGKGSYGTAYKAVLEE-STTVVVKRLKEVVVGK----RDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFA 464 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~~----~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~ 464 (682)
.+.||+|+||.||+|.... ++.||+|++....... +.+.+|+.++.++ +||||+++++++..++..|+||||++
T Consensus 36 ~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~ 114 (286)
T 3uqc_A 36 LIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRI-DKPGVARVLDVVHTRAGGLVVAEWIR 114 (286)
T ss_dssp EEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEEETTEEEEEEECCC
T ss_pred EEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcC-CCCCcceeeEEEEECCcEEEEEEecC
Confidence 4689999999999999865 7889999997654332 5688899999988 99999999999999999999999999
Q ss_pred CCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCCCC
Q 005693 465 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPAT 544 (682)
Q Consensus 465 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~~ 544 (682)
+++|.+++... ....++.+++.|++.||+|||+++ |+||||||+|||+++++.+||+++|
T Consensus 115 g~~L~~~l~~~-------~~~~~~~~i~~ql~~aL~~lH~~g---ivH~Dikp~NIll~~~g~~kl~~~~---------- 174 (286)
T 3uqc_A 115 GGSLQEVADTS-------PSPVGAIRAMQSLAAAADAAHRAG---VALSIDHPSRVRVSIDGDVVLAYPA---------- 174 (286)
T ss_dssp EEEHHHHHTTC-------CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEETTSCEEECSCC----------
T ss_pred CCCHHHHHhcC-------CChHHHHHHHHHHHHHHHHHHHCC---CccCCCCcccEEEcCCCCEEEEecc----------
Confidence 99999999531 355678899999999999999998 9999999999999999999998554
Q ss_pred CCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhccccChH
Q 005693 545 PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIE 624 (682)
Q Consensus 545 ~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 624 (682)
|++ .++.++|||||||++|||+||+.||.+....+..... .................
T Consensus 175 ------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~-- 231 (286)
T 3uqc_A 175 ------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPA--------ERDTAGQPIEPADIDRD-- 231 (286)
T ss_dssp ------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEEC--------CBCTTSCBCCHHHHCTT--
T ss_pred ------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHH--------HHHhccCCCChhhcccC--
Confidence 333 3688999999999999999999999876543321000 00000000000000111
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcCCCC
Q 005693 625 EEMVQMLQIGMACVAKVPDMRPNMDEVVRMIEEVRQSDSEN 665 (682)
Q Consensus 625 ~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~i~~~~~~~ 665 (682)
....+.+++.+||+.||++| |++|+++.|+++.......
T Consensus 232 -~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~~~~ 270 (286)
T 3uqc_A 232 -IPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAVADRT 270 (286)
T ss_dssp -SCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC-----
T ss_pred -CCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccCCcc
Confidence 22346677889999999999 9999999999998766543
No 245
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.7e-35 Score=309.85 Aligned_cols=233 Identities=23% Similarity=0.387 Sum_probs=184.0
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeecccc-------ChhhHHHHHHHHHHhc---CCCceeceEEEEEecCceEE
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV-------GKRDFEQQMEIVGRVG---QHPNVVPLRAYYYSKDEKLL 458 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-------~~~~~~~e~~~l~~l~---~h~niv~l~~~~~~~~~~~l 458 (682)
.+.||+|+||.||+|... +++.||+|++..... ....+.+|+.++.++. +|+||+++++++...+..++
T Consensus 36 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~~~~~~ 115 (312)
T 2iwi_A 36 GPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFML 115 (312)
T ss_dssp EEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-----CEE
T ss_pred eeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecCCeEEE
Confidence 578999999999999864 578899999965432 2234667888888875 79999999999999999999
Q ss_pred EEee-ccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEec-CCCCeEEeecCCC
Q 005693 459 VYDY-FASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLIN-QDLDGCISDFGLT 536 (682)
Q Consensus 459 V~e~-~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~-~~~~~kl~DfGla 536 (682)
|||| +.+++|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++ +++.+||+|||++
T Consensus 116 v~e~~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~kl~dfg~~ 187 (312)
T 2iwi_A 116 VLERPLPAQDLFDYITEK-----GPLGEGPSRCFFGQVVAAIQHCHSRG---VVHRDIKDENILIDLRRGCAKLIDFGSG 187 (312)
T ss_dssp EEECCSSEEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHHT---EECCCCSGGGEEEETTTTEEEECCCSSC
T ss_pred EEEecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChhhEEEeCCCCeEEEEEcchh
Confidence 9999 7899999999743 24899999999999999999999998 99999999999999 8899999999998
Q ss_pred CCCCCC--CCCCCCCcccCccccccCCCC-CcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccc
Q 005693 537 PLMNVP--ATPSRSAGYRAPEVIETRKHS-HKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVF 613 (682)
Q Consensus 537 ~~~~~~--~~~~~~~~y~aPE~~~~~~~~-~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 613 (682)
...... ....++..|+|||++.+..+. .++||||||+++|||++|+.||.... ......
T Consensus 188 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------------~~~~~~------ 249 (312)
T 2iwi_A 188 ALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ------------EILEAE------ 249 (312)
T ss_dssp EECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------------HHHHTC------
T ss_pred hhcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH------------HHhhhc------
Confidence 766543 234578899999999877664 58999999999999999999996421 001000
Q ss_pred hhhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005693 614 DVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRM 654 (682)
Q Consensus 614 d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 654 (682)
..... .....+.+++.+||+.||++|||++|++++
T Consensus 250 ---~~~~~---~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 250 ---LHFPA---HVSPDCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp ---CCCCT---TSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred ---cCCcc---cCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00011 122346677889999999999999999874
No 246
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=2.8e-34 Score=298.95 Aligned_cols=228 Identities=18% Similarity=0.284 Sum_probs=175.5
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeeccccChhhHHHHHHHHHHhcCCCceeceEEEEEe----cCceEEEEeecc
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYS----KDEKLLVYDYFA 464 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~----~~~~~lV~e~~~ 464 (682)
.+.||+|+||.||+|... +++.||+|+++. ...+.+|++++.+..+||||+++++++.. +...++||||++
T Consensus 23 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~ 98 (299)
T 3m2w_A 23 SQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLD 98 (299)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEC----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCCC
T ss_pred CcccccCCCeEEEEEEEcCCCcEEEEEEecc----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeecC
Confidence 367999999999999974 578899999864 35678899988777799999999999987 667899999999
Q ss_pred CCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecC---CCCeEEeecCCCCCCCC
Q 005693 465 SGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQ---DLDGCISDFGLTPLMNV 541 (682)
Q Consensus 465 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~---~~~~kl~DfGla~~~~~ 541 (682)
+|+|.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++. ++.+||+|||++....
T Consensus 99 ~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~- 171 (299)
T 3m2w_A 99 GGELFSRIQDRG---DQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT- 171 (299)
T ss_dssp SCBHHHHHHHCT---TCCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSTTCCEEECCCTTCEECT-
T ss_pred CCcHHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEecCCCCCcEEEeccccccccc-
Confidence 999999997643 235899999999999999999999998 999999999999998 7889999999986432
Q ss_pred CCCCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhcccc
Q 005693 542 PATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQ 621 (682)
Q Consensus 542 ~~~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 621 (682)
+..++.++|||||||++|||++|+.||......+.... .................
T Consensus 172 -----------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~- 226 (299)
T 3m2w_A 172 -----------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPG-------MKTRIRMGQYEFPNPEW- 226 (299)
T ss_dssp -----------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CC-------SCCSSCTTCCSSCHHHH-
T ss_pred -----------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHH-------HHHHHhhccccCCchhc-
Confidence 24577899999999999999999999975432221000 00000000000000000
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 005693 622 NIEEEMVQMLQIGMACVAKVPDMRPNMDEVVRMI 655 (682)
Q Consensus 622 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L 655 (682)
......+.+++.+||+.||++|||++|++++-
T Consensus 227 --~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp 258 (299)
T 3m2w_A 227 --SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHP 258 (299)
T ss_dssp --TTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred --ccCCHHHHHHHHHHcccChhhCCCHHHHhcCh
Confidence 11234567788899999999999999999843
No 247
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.1e-34 Score=336.03 Aligned_cols=233 Identities=18% Similarity=0.266 Sum_probs=188.7
Q ss_pred hccccccCeEEEEEEEEc--CCceEEEEEeecccc--ChhhHHHHHHHHHHhcCCCceeceEEEEEecCc-----eEEEE
Q 005693 390 AEVLGKGSYGTAYKAVLE--ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDE-----KLLVY 460 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~--~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~-----~~lV~ 460 (682)
.+.||+|+||.||+|.+. +++.||||++..... ....+.+|++++.++ +||||+++++++...+. .|+||
T Consensus 85 ~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~~~~~~lv~ 163 (681)
T 2pzi_A 85 KGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEV-VHPSIVQIFNFVEHTDRHGDPVGYIVM 163 (681)
T ss_dssp EEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGC-CCTTBCCEEEEEEEECTTSCEEEEEEE
T ss_pred EEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhc-CCCCcCeEeeeEeecCCCCCceeEEEE
Confidence 468999999999999986 578899999865322 234678899999999 89999999999988766 69999
Q ss_pred eeccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCC
Q 005693 461 DYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN 540 (682)
Q Consensus 461 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~ 540 (682)
||+++++|.+++.. .+++.+++.++.||+.||.|||+++ |+||||||+|||++.+ .+||+|||+++...
T Consensus 164 E~~~g~~L~~~~~~-------~l~~~~~~~~~~qi~~aL~~lH~~g---iiHrDlkp~NIll~~~-~~kl~DFG~a~~~~ 232 (681)
T 2pzi_A 164 EYVGGQSLKRSKGQ-------KLPVAEAIAYLLEILPALSYLHSIG---LVYNDLKPENIMLTEE-QLKLIDLGAVSRIN 232 (681)
T ss_dssp ECCCCEECC----C-------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECSS-CEEECCCTTCEETT
T ss_pred EeCCCCcHHHHHhC-------CCCHHHHHHHHHHHHHHHHHHHHCC---CeecccChHHeEEeCC-cEEEEecccchhcc
Confidence 99999999987752 4899999999999999999999998 9999999999999986 89999999998877
Q ss_pred CCCCCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhccc
Q 005693 541 VPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRF 620 (682)
Q Consensus 541 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 620 (682)
......||++|+|||++.+. ++.++|||||||++|||++|..||.+........ .
T Consensus 233 ~~~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~~~------------------------~ 287 (681)
T 2pzi_A 233 SFGYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVDGLPE------------------------D 287 (681)
T ss_dssp CCSCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECSSCCT------------------------T
T ss_pred cCCccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCcccccccccc------------------------c
Confidence 76677799999999998765 4889999999999999999999887532211100 0
Q ss_pred cChHHHHHHHHHHHHHcccCCCCCCCC-HHHHHHHHHHhh
Q 005693 621 QNIEEEMVQMLQIGMACVAKVPDMRPN-MDEVVRMIEEVR 659 (682)
Q Consensus 621 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt-~~evl~~L~~i~ 659 (682)
.........+.+++.+||+.||++||+ ++++.+.|..+.
T Consensus 288 ~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~ 327 (681)
T 2pzi_A 288 DPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVL 327 (681)
T ss_dssp CHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred ccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHH
Confidence 001122345678888999999999995 666777666554
No 248
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=6.4e-35 Score=330.04 Aligned_cols=262 Identities=19% Similarity=0.272 Sum_probs=196.4
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeecccc--ChhhHHHHHHHHHHhcCCCceeceEEEEEe------cCceEEEE
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV--GKRDFEQQMEIVGRVGQHPNVVPLRAYYYS------KDEKLLVY 460 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~------~~~~~lV~ 460 (682)
.+.||+|+||.||+|... +++.||+|+++.... ..+.+.+|++++.++ +||||+++++++.. ++..++||
T Consensus 19 ~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~v~~~~~~~~~~~~~~LVm 97 (676)
T 3qa8_A 19 KERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKL-NHPNVVSAREVPDGLQKLAPNDLPLLAM 97 (676)
T ss_dssp CCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHC-CBTTBCCEEECCTTTCCCCTTSSCCCEE
T ss_pred EEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhC-CCCCCCceeeeecccccccCCCeEEEEE
Confidence 578999999999999974 578899999875422 245688999999999 99999999999765 66779999
Q ss_pred eeccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCC---eEEeecCCCC
Q 005693 461 DYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLD---GCISDFGLTP 537 (682)
Q Consensus 461 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~---~kl~DfGla~ 537 (682)
||+++|+|.+++..... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++. +||+|||++.
T Consensus 98 Ey~~ggsL~~~L~~~~~--~~~lse~~i~~I~~QLl~aL~yLHs~g---IVHrDLKP~NILl~~~g~~~~vKL~DFG~a~ 172 (676)
T 3qa8_A 98 EYCEGGDLRKYLNQFEN--CCGLKEGPIRTLLSDISSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAK 172 (676)
T ss_dssp ECCSSCBHHHHHHSSSC--TTCCCSSHHHHHHHHHHHHHHHHHHTT---BCCCCCCSTTEEEECCSSSCEEEECSCCCCC
T ss_pred EeCCCCCHHHHHHhccc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEeecCCCceeEEEccccccc
Confidence 99999999999986432 234888999999999999999999998 999999999999997765 8999999998
Q ss_pred CCCCCC---CCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHH--------hhh
Q 005693 538 LMNVPA---TPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPTRDDMVDLPRWVQSV--------VRE 606 (682)
Q Consensus 538 ~~~~~~---~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~~~~~~~~~~l~~~~~~~--------~~~ 606 (682)
...... ...+++.|+|||++.+..++.++||||||+++|||++|..||.+.... ..|.... ...
T Consensus 173 ~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~-----~~~~~~i~~~~~~~~~~~ 247 (676)
T 3qa8_A 173 ELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQP-----VQWHGKVREKSNEHIVVY 247 (676)
T ss_dssp BTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHH-----HHSSTTCC------CCSC
T ss_pred ccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccch-----hhhhhhhhcccchhhhhh
Confidence 765433 345788999999999999999999999999999999999999753110 0000000 000
Q ss_pred ccccc--cchhhhccc-cChHHHHHHHHHHHHHcccCCCCCCCCHHH-----HHHHHHHhhhcC
Q 005693 607 EWTAE--VFDVELMRF-QNIEEEMVQMLQIGMACVAKVPDMRPNMDE-----VVRMIEEVRQSD 662 (682)
Q Consensus 607 ~~~~~--~~d~~l~~~-~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~e-----vl~~L~~i~~~~ 662 (682)
..... .+....... .........+.+++.+||+.||++|||++| ..+.++.+....
T Consensus 248 ~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~~k 311 (676)
T 3qa8_A 248 DDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILSLK 311 (676)
T ss_dssp CCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHCCC
T ss_pred hhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHhcc
Confidence 00000 000000000 111234556778888999999999999988 556677766544
No 249
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=4.4e-34 Score=311.28 Aligned_cols=236 Identities=13% Similarity=0.132 Sum_probs=172.1
Q ss_pred hccccccCeEEEEEEEEc-CCceEEEEEeecccc----ChhhHHHHHHHHHHhcCC-Cceec------------------
Q 005693 390 AEVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVVV----GKRDFEQQMEIVGRVGQH-PNVVP------------------ 445 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~----~~~~~~~e~~~l~~l~~h-~niv~------------------ 445 (682)
.+.||+|+||+||+|.+. +++.||||++..... ..+.+++|+.++..+ +| +|...
T Consensus 83 ~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (413)
T 3dzo_A 83 GTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLL-RGIKNQKQAKVHLRFIFPFDLVKDPQ 161 (413)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGS-TTCCSHHHHHHHTCBCCCCEEEECCC
T ss_pred ecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhh-ccCCCHHHHHHhcccccchhhcccCC
Confidence 468999999999999965 578999999873322 246788899888877 44 32111
Q ss_pred ---eEEEEEe-----cCceEEEEeeccCCchhHhhccCC--CCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCC
Q 005693 446 ---LRAYYYS-----KDEKLLVYDYFASGSLSTLLHGNR--GAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNI 515 (682)
Q Consensus 446 ---l~~~~~~-----~~~~~lV~e~~~~g~L~~~l~~~~--~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDL 515 (682)
+..++.. ....+++|+++ +|+|.+++.... ......+++..++.++.|+++||+|||+++ |+||||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---iiHrDi 237 (413)
T 3dzo_A 162 KKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG---LVHTYL 237 (413)
T ss_dssp ---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT---EECSCC
T ss_pred CCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCc
Confidence 1111111 12346666655 679999884211 012334788899999999999999999998 999999
Q ss_pred CCCCeEecCCCCeEEeecCCCCCCCCCC-CCCCCCcccCcccc----------ccCCCCCcchHHHHHHHHHHHHhCCCC
Q 005693 516 KASNVLINQDLDGCISDFGLTPLMNVPA-TPSRSAGYRAPEVI----------ETRKHSHKSDVYSFGVLLLEMLTGKAP 584 (682)
Q Consensus 516 k~~NILl~~~~~~kl~DfGla~~~~~~~-~~~~~~~y~aPE~~----------~~~~~~~~sDvwS~Gvvl~elltg~~P 584 (682)
||+|||++.++.+||+|||+++...... ...| +.|+|||++ ....++.++|||||||++|||++|+.|
T Consensus 238 Kp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~P 316 (413)
T 3dzo_A 238 RPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLP 316 (413)
T ss_dssp CGGGEEECTTCCEEECCGGGCEETTEEECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCC
T ss_pred ccceEEEecCCeEEEEeccceeecCCccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCC
Confidence 9999999999999999999987665432 3456 899999999 555688999999999999999999999
Q ss_pred CCCCCCCCCCChhHHHHHHhhhccccccchhhhccccChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005693 585 LQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACVAKVPDMRPNMDEVVR 653 (682)
Q Consensus 585 f~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 653 (682)
|......+... ..+......+ ..+.+++.+||+.||++||++.|+++
T Consensus 317 f~~~~~~~~~~-------------------~~~~~~~~~~---~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 317 NTDDAALGGSE-------------------WIFRSCKNIP---QPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp CCTTGGGSCSG-------------------GGGSSCCCCC---HHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCcchhhhHH-------------------HHHhhcccCC---HHHHHHHHHHccCChhhCcCHHHHHh
Confidence 97654332211 1111111222 45677778999999999999877754
No 250
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=5.9e-33 Score=293.89 Aligned_cols=238 Identities=13% Similarity=0.168 Sum_probs=180.8
Q ss_pred HhhccccccCeEEEEEEEEcCCceEEEEEeecccc---------ChhhHHHHHHHHHHhc--------CCCceeceEEEE
Q 005693 388 ASAEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVV---------GKRDFEQQMEIVGRVG--------QHPNVVPLRAYY 450 (682)
Q Consensus 388 ~~~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~---------~~~~~~~e~~~l~~l~--------~h~niv~l~~~~ 450 (682)
...+.||+|+||+||+|+. +++.||+|+++.... ..+.+.+|+++++.+. +||||+++.+.+
T Consensus 23 ~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~~~ 101 (336)
T 2vuw_A 23 QRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVH 101 (336)
T ss_dssp HTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEEEE
T ss_pred hheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhccee
Confidence 3468899999999999998 579999999976532 1267899999999885 488888888775
Q ss_pred E------------------------------ecCceEEEEeeccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHH
Q 005693 451 Y------------------------------SKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVA 500 (682)
Q Consensus 451 ~------------------------------~~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~ 500 (682)
. .++..++||||+++|++.+.+.+ ..+++..++.++.||+.||+
T Consensus 102 ~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~------~~~~~~~~~~i~~qi~~aL~ 175 (336)
T 2vuw_A 102 CVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT------KLSSLATAKSILHQLTASLA 175 (336)
T ss_dssp EEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT------TCCCHHHHHHHHHHHHHHHH
T ss_pred EecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh------cCCCHHHHHHHHHHHHHHHH
Confidence 3 26788999999999987777642 23899999999999999999
Q ss_pred HHH-hcCCCCcEecCCCCCCeEecCCC--------------------CeEEeecCCCCCCCCCCCCCCCCcccCcccccc
Q 005693 501 HIH-SMGGPKFTHGNIKASNVLINQDL--------------------DGCISDFGLTPLMNVPATPSRSAGYRAPEVIET 559 (682)
Q Consensus 501 ~LH-~~~~~~ivHrDLk~~NILl~~~~--------------------~~kl~DfGla~~~~~~~~~~~~~~y~aPE~~~~ 559 (682)
||| +.+ |+||||||+|||++.++ .+||+|||+|+..... ...||+.|+|||++.+
T Consensus 176 ~lH~~~~---ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-~~~gt~~y~aPE~~~g 251 (336)
T 2vuw_A 176 VAEASLR---FEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-IVVFCDVSMDEDLFTG 251 (336)
T ss_dssp HHHHHHC---CBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-EEECCCCTTCSGGGCC
T ss_pred HHHHhCC---EeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-cEEEeecccChhhhcC
Confidence 999 888 99999999999999887 8999999999876543 3468999999999987
Q ss_pred CCCCCcchHHHHHHH-HHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhccccccchhhhccccChHHHHHHHHHHHHHcc
Q 005693 560 RKHSHKSDVYSFGVL-LLEMLTGKAPLQSPTRDDMVDLPRWVQSVVREEWTAEVFDVELMRFQNIEEEMVQMLQIGMACV 638 (682)
Q Consensus 560 ~~~~~~sDvwS~Gvv-l~elltg~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl 638 (682)
.. +.++||||+|++ .+++++|..||.. ..|.......-........ .............+.+++.+||
T Consensus 252 ~~-~~~~Diwsl~~~~~~~~~~g~~p~~~---------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~s~~~~dli~~~L 320 (336)
T 2vuw_A 252 DG-DYQFDIYRLMKKENNNRWGEYHPYSN---------VLWLHYLTDKMLKQMTFKT-KCNTPAMKQIKRKIQEFHRTML 320 (336)
T ss_dssp CS-SHHHHHHHHHHHHHTTCTTSCCTHHH---------HHHHHHHHHHHHHTCCCSS-CCCSHHHHHHHHHHHHHHHHGG
T ss_pred CC-ccceehhhhhCCCCcccccccCCCcc---------hhhhhHHHHhhhhhhccCc-ccchhhhhhcCHHHHHHHHHHh
Confidence 66 889999998777 7889999999852 1121111111000000000 0001112345667888889999
Q ss_pred cCCCCCCCCHHHHH
Q 005693 639 AKVPDMRPNMDEVV 652 (682)
Q Consensus 639 ~~dP~~RPt~~evl 652 (682)
+.| |++|++
T Consensus 321 ~~d-----sa~e~l 329 (336)
T 2vuw_A 321 NFS-----SATDLL 329 (336)
T ss_dssp GSS-----SHHHHH
T ss_pred ccC-----CHHHHH
Confidence 976 899988
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.94 E-value=1e-28 Score=278.55 Aligned_cols=181 Identities=17% Similarity=0.104 Sum_probs=127.6
Q ss_pred cccccCeEEEEEEE-EcCCceEEEEEeeccc-----------cChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEE
Q 005693 392 VLGKGSYGTAYKAV-LEESTTVVVKRLKEVV-----------VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLV 459 (682)
Q Consensus 392 ~lG~G~fg~Vy~~~-~~~~~~vavK~l~~~~-----------~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV 459 (682)
..+.|++|.+..++ .--|..+++|++.... ...++|.+|++++.++.+|+||+++++++++++..|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 45667777666654 3347889999996542 12356899999999998999999999999999999999
Q ss_pred EeeccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCC
Q 005693 460 YDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLM 539 (682)
Q Consensus 460 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~ 539 (682)
|||++||+|.+++... .+++.. +|+.||+.||+|+|++| ||||||||+|||+++++.+||+|||+|+..
T Consensus 321 MEyv~G~~L~d~i~~~-----~~l~~~---~I~~QIl~AL~ylH~~G---IIHRDIKPeNILL~~dg~vKL~DFGlAr~~ 389 (569)
T 4azs_A 321 MEKLPGRLLSDMLAAG-----EEIDRE---KILGSLLRSLAALEKQG---FWHDDVRPWNVMVDARQHARLIDFGSIVTT 389 (569)
T ss_dssp EECCCSEEHHHHHHTT-----CCCCHH---HHHHHHHHHHHHHHHTT---CEESCCCGGGEEECTTSCEEECCCTTEESC
T ss_pred EecCCCCcHHHHHHhC-----CCCCHH---HHHHHHHHHHHHHHHCC---ceeccCchHhEEECCCCCEEEeecccCeeC
Confidence 9999999999999743 236554 58899999999999999 999999999999999999999999999876
Q ss_pred CCCCC----CCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCC
Q 005693 540 NVPAT----PSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAP 584 (682)
Q Consensus 540 ~~~~~----~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~P 584 (682)
..... ..||++|||||++.+ .+..++|+||+|++++++.++..+
T Consensus 390 ~~~~~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 390 PQDCSWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp C---CCSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred CCCCccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 54432 247889999999975 467789999999998887665444
No 252
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.94 E-value=3.3e-27 Score=247.20 Aligned_cols=189 Identities=36% Similarity=0.672 Sum_probs=169.6
Q ss_pred cCChhHHHHHHHHHHhCCCCC-CcCCCCCCCCCCC--cceEEecCCC--CeEEEEEeCCCcccc--cCCccccCCCCCCc
Q 005693 72 ADLNSDRQALLDFADAVPHLR-KLNWSSTNPICQS--WVGINCTQDR--TRVFGLRLPGIGLVG--PIPNNTLGKLDALE 144 (682)
Q Consensus 72 ~~~~~~~~al~~~~~~~~~~~-~~~w~~~~~~c~~--w~gv~C~~~~--~~v~~l~l~~~~l~g--~lp~~~~~~l~~L~ 144 (682)
.|.++|+.||++||+++.+.. ..+|+.+.++| . |.||.|+... ++|+.|+|+++++.| .+|+ .++++++|+
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~~l~~W~~~~~~C-~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~-~l~~l~~L~ 79 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPTTLSSWLPTTDCC-NRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPS-SLANLPYLN 79 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCGGGTTCCTTSCTT-TTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCG-GGGGCTTCS
T ss_pred CCCHHHHHHHHHHHHhcCCcccccCCCCCCCCC-cCCCcceEeCCCCCCceEEEEECCCCCccCCcccCh-hHhCCCCCC
Confidence 466789999999999996543 34898776777 5 9999998654 799999999999999 8998 799999999
Q ss_pred EEEccC-CCCCCCCCCcCCCCCCCcEEeecccccCCcCCCCcc--cccceeecccccCcccCCcchhhhccccceeccCC
Q 005693 145 VLSLRS-NVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSN 221 (682)
Q Consensus 145 ~L~L~~-N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~--~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N 221 (682)
+|+|++ |++.+.+|..|+++++|++|+|++|++++.+|..+. ++|++|+|++|+|++.+|..|+++++|++|+|++|
T Consensus 80 ~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 159 (313)
T 1ogq_A 80 FLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGN 159 (313)
T ss_dssp EEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSS
T ss_pred eeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCC
Confidence 999995 999999999999999999999999999999999887 89999999999999999999999999999999999
Q ss_pred cccCCCCCC--CCC-CCCeEEecccCCCCCCCccccCCCCCCCCC
Q 005693 222 NLSGSIPNF--DIP-KLRHLNLSYNGLKGSIPSSLQKFPNSSFVG 263 (682)
Q Consensus 222 ~l~g~~p~~--~l~-~L~~l~ls~N~l~g~~p~~~~~l~~l~~~~ 263 (682)
+++|.+|.. .++ +|+.|+|++|++++.+|..+..++ |+.++
T Consensus 160 ~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~ 203 (313)
T 1ogq_A 160 RISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVD 203 (313)
T ss_dssp CCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEE
T ss_pred cccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEE
Confidence 999988874 776 999999999999999999888765 55443
No 253
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.91 E-value=2.3e-25 Score=249.77 Aligned_cols=177 Identities=16% Similarity=0.210 Sum_probs=144.2
Q ss_pred hccccccCeEEEEEEEEcCCceEEEEEeeccccC---------hhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEE
Q 005693 390 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVG---------KRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVY 460 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~---------~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~ 460 (682)
.+.||+|+||+||+|.. .++.+++|+....... .+.+.+|++++.++ +||||+++..++...+..++||
T Consensus 341 ~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~~~~~~~~~~~~~lVm 418 (540)
T 3en9_A 341 EHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALV-KDFGIPAPYIFDVDLDNKRIMM 418 (540)
T ss_dssp -------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHG-GGGTCCCCCEEEEETTTTEEEE
T ss_pred CCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhc-CCCCcCceEEEEEeCCccEEEE
Confidence 56899999999999954 4678888886543221 23478999999999 9999997777777888889999
Q ss_pred eeccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCC
Q 005693 461 DYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMN 540 (682)
Q Consensus 461 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~ 540 (682)
||+++|+|.+++.. +..++.|+++||+|||+++ |+||||||+|||+++ .+||+|||+++...
T Consensus 419 E~~~ggsL~~~l~~-------------~~~i~~qi~~aL~~LH~~g---IiHrDiKp~NILl~~--~~kL~DFGla~~~~ 480 (540)
T 3en9_A 419 SYINGKLAKDVIED-------------NLDIAYKIGEIVGKLHKND---VIHNDLTTSNFIFDK--DLYIIDFGLGKISN 480 (540)
T ss_dssp ECCCSEEHHHHSTT-------------CTHHHHHHHHHHHHHHHTT---EECTTCCTTSEEESS--SEEECCCTTCEECC
T ss_pred ECCCCCCHHHHHHH-------------HHHHHHHHHHHHHHHHHCc---CccCCCCHHHEEECC--eEEEEECccCEECC
Confidence 99999999999963 4579999999999999998 999999999999999 99999999998876
Q ss_pred CCC-----------CCCCCCcccCcccccc--CCCCCcchHHHHHHHHHHHHhCCCCCC
Q 005693 541 VPA-----------TPSRSAGYRAPEVIET--RKHSHKSDVYSFGVLLLEMLTGKAPLQ 586 (682)
Q Consensus 541 ~~~-----------~~~~~~~y~aPE~~~~--~~~~~~sDvwS~Gvvl~elltg~~Pf~ 586 (682)
... ...||+.|+|||++.. ..|+..+|+|+..+-..+.+.++.+|.
T Consensus 481 ~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 481 LDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp CHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred CccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 532 2347899999999986 568888999999999999888887774
No 254
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.91 E-value=1e-24 Score=256.01 Aligned_cols=190 Identities=24% Similarity=0.349 Sum_probs=155.7
Q ss_pred cccCChhHHHHHHHHHHhCCCC-CCcCCCCCCCCCCCcceEEecCCCCeEEEEEeCCCccccc---CCc-----------
Q 005693 70 AFADLNSDRQALLDFADAVPHL-RKLNWSSTNPICQSWVGINCTQDRTRVFGLRLPGIGLVGP---IPN----------- 134 (682)
Q Consensus 70 ~~~~~~~~~~al~~~~~~~~~~-~~~~w~~~~~~c~~w~gv~C~~~~~~v~~l~l~~~~l~g~---lp~----------- 134 (682)
+..+.++|++||++||+++.+. ...+|+.+.+|| +|.||+|+ .++|+.|+|+++++.|. +|+
T Consensus 6 ~~~~~~~~~~all~~k~~~~~~~~l~~W~~~~~~C-~w~gv~C~--~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l 82 (768)
T 3rgz_A 6 PSQSLYREIHQLISFKDVLPDKNLLPDWSSNKNPC-TFDGVTCR--DDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESL 82 (768)
T ss_dssp --CCHHHHHHHHHHHHTTCSCTTSSTTCCTTSCGG-GSTTEEEE--TTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCEE
T ss_pred cccCCHHHHHHHHHHHhhCCCcccccCCCCCCCCc-CCcceEEC--CCcEEEEECCCCCcCCccCccChhHhccCccccc
Confidence 3445678999999999998543 344898666666 89999998 58999999999999987 543
Q ss_pred -----------cccCCCCCCcEEEccCCCCCCCCCC--cCCCCCCCcEEeecccccCCcCCCCcc---cccceeeccccc
Q 005693 135 -----------NTLGKLDALEVLSLRSNVLTGGLPS--EITSLPSLRYLYLQHNNFSGKIPSSFS---PQLVVLDLSFNS 198 (682)
Q Consensus 135 -----------~~~~~l~~L~~L~L~~N~l~g~~p~--~~~~l~~L~~L~L~~N~l~g~~p~~~~---~~L~~L~ls~N~ 198 (682)
..++++++|++|||++|.++|.+|. .++++++|++|+|++|.+++.+|..+. ++|++|+|++|+
T Consensus 83 ~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~ 162 (768)
T 3rgz_A 83 FLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANS 162 (768)
T ss_dssp ECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSC
T ss_pred CCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCc
Confidence 3688999999999999999999998 899999999999999999999998762 789999999999
Q ss_pred CcccCCcc---hhhhccccceeccCCcccCCCCCCCCCCCCeEEecccCCCCCCCccccCCCCCCCCC
Q 005693 199 FTGNIPQS---IQNLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFVG 263 (682)
Q Consensus 199 l~g~~p~~---~~~l~~L~~L~l~~N~l~g~~p~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~l~~~~ 263 (682)
+++..|.. ++++++|+.|+|++|++++.+|...+++|++|+|++|++++.+|. ++++++|+.++
T Consensus 163 l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~ 229 (768)
T 3rgz_A 163 ISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLD 229 (768)
T ss_dssp CEEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEE
T ss_pred cCCcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEE
Confidence 99888877 778888888888888888777766777777777777777776666 66666665543
No 255
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.90 E-value=1e-24 Score=250.33 Aligned_cols=184 Identities=26% Similarity=0.458 Sum_probs=162.3
Q ss_pred hhHHHHHHHHHHhCCCCCC----------cCCCCCCCCCCCc---ceEEecCCCCeEEEEEeCCCcccccCCccccCCCC
Q 005693 75 NSDRQALLDFADAVPHLRK----------LNWSSTNPICQSW---VGINCTQDRTRVFGLRLPGIGLVGPIPNNTLGKLD 141 (682)
Q Consensus 75 ~~~~~al~~~~~~~~~~~~----------~~w~~~~~~c~~w---~gv~C~~~~~~v~~l~l~~~~l~g~lp~~~~~~l~ 141 (682)
..|+.||.++++++..... .+|+.+.++| .| .||+|+.. ++|+.|+|+++++.|.+|+ .+++|+
T Consensus 29 ~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~~~c-~w~~~~GV~C~~~-~~V~~L~L~~~~l~g~lp~-~l~~L~ 105 (636)
T 4eco_A 29 IKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKELD-MWGAQPGVSLNSN-GRVTGLSLEGFGASGRVPD-AIGQLT 105 (636)
T ss_dssp HHHHHHHHHHHHHTTGGGCCCCC------CCCCCSSCGG-GTTCCTTEEECTT-CCEEEEECTTSCCEEEECG-GGGGCT
T ss_pred HHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCCCcc-cccCCCCeEEcCC-CCEEEEEecCcccCCcCCh-HHhcCc
Confidence 4699999999999854321 2698776766 89 99999865 8999999999999999998 899999
Q ss_pred CCcEEEccCCC---------------------------------------------------------------------
Q 005693 142 ALEVLSLRSNV--------------------------------------------------------------------- 152 (682)
Q Consensus 142 ~L~~L~L~~N~--------------------------------------------------------------------- 152 (682)
+|++|+|++|.
T Consensus 106 ~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~ 185 (636)
T 4eco_A 106 ELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKD 185 (636)
T ss_dssp TCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCCCT
T ss_pred cceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccchhh
Confidence 99999999884
Q ss_pred ---------CCCCCCCcCCCCCCCcEEeecccccCCc-----------------CCCCcc----cccceeecccccCccc
Q 005693 153 ---------LTGGLPSEITSLPSLRYLYLQHNNFSGK-----------------IPSSFS----PQLVVLDLSFNSFTGN 202 (682)
Q Consensus 153 ---------l~g~~p~~~~~l~~L~~L~L~~N~l~g~-----------------~p~~~~----~~L~~L~ls~N~l~g~ 202 (682)
|+| +|+.|+++++|++|+|++|+|+|. +|..++ ++|++|+|++|+++|.
T Consensus 186 l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~ 264 (636)
T 4eco_A 186 TQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTK 264 (636)
T ss_dssp TTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSS
T ss_pred hhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCcc
Confidence 445 899999999999999999999996 898876 7899999999999999
Q ss_pred CCcchhhhccccceeccCCc-ccC-CCCCC--CC------CCCCeEEecccCCCCCCCc--cccCCCCCCCCC
Q 005693 203 IPQSIQNLTQLTGLSLQSNN-LSG-SIPNF--DI------PKLRHLNLSYNGLKGSIPS--SLQKFPNSSFVG 263 (682)
Q Consensus 203 ~p~~~~~l~~L~~L~l~~N~-l~g-~~p~~--~l------~~L~~l~ls~N~l~g~~p~--~~~~l~~l~~~~ 263 (682)
+|..|+++++|+.|+|++|+ ++| .+|.. .+ ++|+.|+|++|+++ .+|. .++++++|+.++
T Consensus 265 ~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~ 336 (636)
T 4eco_A 265 LPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLE 336 (636)
T ss_dssp CCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEE
T ss_pred ChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEe
Confidence 99999999999999999998 998 78763 44 89999999999999 8998 888888887665
No 256
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.90 E-value=1.5e-24 Score=254.25 Aligned_cols=184 Identities=27% Similarity=0.467 Sum_probs=161.3
Q ss_pred ChhHHHHHHHHHHhCCCCCCcCCCCCC-----CC-CCCc------------ceEEecCCCCeEEEEEeCCCcccccCCcc
Q 005693 74 LNSDRQALLDFADAVPHLRKLNWSSTN-----PI-CQSW------------VGINCTQDRTRVFGLRLPGIGLVGPIPNN 135 (682)
Q Consensus 74 ~~~~~~al~~~~~~~~~~~~~~w~~~~-----~~-c~~w------------~gv~C~~~~~~v~~l~l~~~~l~g~lp~~ 135 (682)
...|+.||++||+++... +|+.+. ++ +|+| .||.|+. .++|+.|+|+++++.|.+|+
T Consensus 267 ~~~d~~ALl~~k~~l~~~---~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~-~~~V~~L~Ls~~~L~G~ip~- 341 (876)
T 4ecn_A 267 YIKDYKALKAIWEALDGK---NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDN-NGRVTGLSLAGFGAKGRVPD- 341 (876)
T ss_dssp HHHHHHHHHHHHHHTTGG---GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECT-TSCEEEEECTTTCCEEEECG-
T ss_pred chHHHHHHHHHHHHcCCC---CCCcCCCcccccCCccccccccccccccCcCceEecC-CCCEEEEECccCCCCCcCch-
Confidence 356999999999999654 686554 34 2599 9999986 58999999999999999998
Q ss_pred ccCCCCCCcEEEc-cCCCCCCC----------------------------------------------------------
Q 005693 136 TLGKLDALEVLSL-RSNVLTGG---------------------------------------------------------- 156 (682)
Q Consensus 136 ~~~~l~~L~~L~L-~~N~l~g~---------------------------------------------------------- 156 (682)
.|++|++|++|+| ++|.++|.
T Consensus 342 ~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~~~~ 421 (876)
T 4ecn_A 342 AIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKDS 421 (876)
T ss_dssp GGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCCCCC
T ss_pred HHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCcccccccccc
Confidence 7999999999999 77766554
Q ss_pred ------------------CCCcCCCCCCCcEEeecccccCC-----------------cCCCCcc----cccceeecccc
Q 005693 157 ------------------LPSEITSLPSLRYLYLQHNNFSG-----------------KIPSSFS----PQLVVLDLSFN 197 (682)
Q Consensus 157 ------------------~p~~~~~l~~L~~L~L~~N~l~g-----------------~~p~~~~----~~L~~L~ls~N 197 (682)
+|..|++|++|++|+|++|+|+| .+|..++ ++|++|+|++|
T Consensus 422 ~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N 501 (876)
T 4ecn_A 422 RISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNC 501 (876)
T ss_dssp CCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESC
T ss_pred ccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCC
Confidence 88899999999999999999998 4898875 79999999999
Q ss_pred cCcccCCcchhhhccccceeccCCc-ccC-CCCCC---------CCCCCCeEEecccCCCCCCCc--cccCCCCCCCCC
Q 005693 198 SFTGNIPQSIQNLTQLTGLSLQSNN-LSG-SIPNF---------DIPKLRHLNLSYNGLKGSIPS--SLQKFPNSSFVG 263 (682)
Q Consensus 198 ~l~g~~p~~~~~l~~L~~L~l~~N~-l~g-~~p~~---------~l~~L~~l~ls~N~l~g~~p~--~~~~l~~l~~~~ 263 (682)
+++|.+|..|++|++|+.|+|++|+ ++| .+|.. .+++|+.|+|++|+++ .+|. .++++++|..++
T Consensus 502 ~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~ 579 (876)
T 4ecn_A 502 PNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLD 579 (876)
T ss_dssp TTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEE
T ss_pred CCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEE
Confidence 9999999999999999999999998 998 77742 4569999999999999 8998 888888877664
No 257
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.85 E-value=3e-22 Score=210.90 Aligned_cols=186 Identities=18% Similarity=0.316 Sum_probs=150.3
Q ss_pred ccCChhHHHHHHHHHHhCC-CCC--CcCCC----CCCCCCCCcceEEecC--------CCCeEEEEEeCCCcccccCCcc
Q 005693 71 FADLNSDRQALLDFADAVP-HLR--KLNWS----STNPICQSWVGINCTQ--------DRTRVFGLRLPGIGLVGPIPNN 135 (682)
Q Consensus 71 ~~~~~~~~~al~~~~~~~~-~~~--~~~w~----~~~~~c~~w~gv~C~~--------~~~~v~~l~l~~~~l~g~lp~~ 135 (682)
..+..+++.||++||.++. +.. ..+|. ...++| .|.|+.|.. ...+|+.|+|++|++. .+|+
T Consensus 22 ~~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~-~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~- 98 (328)
T 4fcg_A 22 STALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIE-TRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPD- 98 (328)
T ss_dssp -CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSC-CSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCS-
T ss_pred cccCchHHHHHHHHHHhccCCchhhhhhhccccccccccc-ccCCcchhhhHHHHhcccccceeEEEccCCCch-hcCh-
Confidence 3456789999999999772 222 23783 344555 899999952 3468999999999998 8888
Q ss_pred ccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecccccCCcCCCCcc--cccceeecccccCcccCCcchhh----
Q 005693 136 TLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQN---- 209 (682)
Q Consensus 136 ~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~--~~L~~L~ls~N~l~g~~p~~~~~---- 209 (682)
.++++++|++|+|++|+++ .+|..++++++|++|+|++|+++ .+|..+. ++|++|+|++|++.+.+|..++.
T Consensus 99 ~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~ 176 (328)
T 4fcg_A 99 QAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDAS 176 (328)
T ss_dssp CGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-C
T ss_pred hhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccch
Confidence 6888999999999999999 89999999999999999999998 7888776 78999999999888888887765
Q ss_pred -----hccccceeccCCcccCCCCCC--CCCCCCeEEecccCCCCCCCccccCCCCCCCCC
Q 005693 210 -----LTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFVG 263 (682)
Q Consensus 210 -----l~~L~~L~l~~N~l~g~~p~~--~l~~L~~l~ls~N~l~g~~p~~~~~l~~l~~~~ 263 (682)
+++|+.|+|++|+|+ .+|.. .+++|+.|+|++|++++ +|+.++++++|+.++
T Consensus 177 ~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~ 235 (328)
T 4fcg_A 177 GEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELD 235 (328)
T ss_dssp CCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEE
T ss_pred hhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEE
Confidence 888999999999888 66653 78888999999998884 666777777776554
No 258
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.85 E-value=1.5e-21 Score=200.73 Aligned_cols=151 Identities=19% Similarity=0.240 Sum_probs=118.7
Q ss_pred hccccccCeEEEEEEEEcCCceEEEEEeecccc-------------------ChhhHHHHHHHHHHhcCCCceeceEEEE
Q 005693 390 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVV-------------------GKRDFEQQMEIVGRVGQHPNVVPLRAYY 450 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~-------------------~~~~~~~e~~~l~~l~~h~niv~l~~~~ 450 (682)
.+.||+|+||.||+|...+++.||+|.++.... ....+.+|++++.++. | +++.+++
T Consensus 95 ~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~---~-~~v~~~~ 170 (282)
T 1zar_A 95 GKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ---G-LAVPKVY 170 (282)
T ss_dssp EEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT---T-SSSCCEE
T ss_pred cCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc---C-CCcCeEE
Confidence 378999999999999997789999999964321 1345889999999994 4 5555554
Q ss_pred EecCceEEEEeeccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEE
Q 005693 451 YSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCI 530 (682)
Q Consensus 451 ~~~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl 530 (682)
.. +..++||||+++|+|.+ +.. .....++.|++.||+|||+.+ |+||||||+|||++ ++.+||
T Consensus 171 ~~-~~~~lvmE~~~g~~L~~-l~~-----------~~~~~i~~qi~~~l~~lH~~g---iiHrDlkp~NILl~-~~~vkl 233 (282)
T 1zar_A 171 AW-EGNAVLMELIDAKELYR-VRV-----------ENPDEVLDMILEEVAKFYHRG---IVHGDLSQYNVLVS-EEGIWI 233 (282)
T ss_dssp EE-ETTEEEEECCCCEEGGG-CCC-----------SCHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEEE-TTEEEE
T ss_pred ec-cceEEEEEecCCCcHHH-cch-----------hhHHHHHHHHHHHHHHHHHCC---CEeCCCCHHHEEEE-CCcEEE
Confidence 43 56799999999999998 531 124469999999999999998 99999999999999 999999
Q ss_pred eecCCCCCCCCCCCCCCCCcccCcccccc----------CCCCCcchHHH
Q 005693 531 SDFGLTPLMNVPATPSRSAGYRAPEVIET----------RKHSHKSDVYS 570 (682)
Q Consensus 531 ~DfGla~~~~~~~~~~~~~~y~aPE~~~~----------~~~~~~sDvwS 570 (682)
+|||+|+.. ..++|||++.. ..+...+|+|.
T Consensus 234 ~DFG~a~~~---------~~~~a~e~l~rdv~~i~~~f~~~~~~~~~~~~ 274 (282)
T 1zar_A 234 IDFPQSVEV---------GEEGWREILERDVRNIITYFSRTYRTEKDINS 274 (282)
T ss_dssp CCCTTCEET---------TSTTHHHHHHHHHHHHHHHHHHHHCCCCCHHH
T ss_pred EECCCCeEC---------CCCCHHHHHHHHHHHHHHHHHHhcCCCCChHH
Confidence 999998643 34789998754 34455566654
No 259
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.85 E-value=7.4e-22 Score=231.66 Aligned_cols=160 Identities=36% Similarity=0.638 Sum_probs=119.8
Q ss_pred eEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcC-----------------------------------
Q 005693 117 RVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEI----------------------------------- 161 (682)
Q Consensus 117 ~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~----------------------------------- 161 (682)
++..|+|++|.++|.+|. .++++++|+.|+|++|.++|.+|..+
T Consensus 515 ~L~~L~L~~N~l~~~~p~-~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (768)
T 3rgz_A 515 NLAILKLSNNSFSGNIPA-ELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNL 593 (768)
T ss_dssp TCCEEECCSSCCEEECCG-GGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEE
T ss_pred CCCEEECCCCcccCcCCH-HHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccc
Confidence 455666666666666665 56666777777777766666655432
Q ss_pred -----------------------------------CCCCCCcEEeecccccCCcCCCCcc--cccceeecccccCcccCC
Q 005693 162 -----------------------------------TSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIP 204 (682)
Q Consensus 162 -----------------------------------~~l~~L~~L~L~~N~l~g~~p~~~~--~~L~~L~ls~N~l~g~~p 204 (682)
.++++|+.|||++|+++|.+|..++ ++|+.|+|++|+|+|.+|
T Consensus 594 ~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip 673 (768)
T 3rgz_A 594 LEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIP 673 (768)
T ss_dssp EECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCC
T ss_pred cccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCC
Confidence 2345677777777777777777776 678888888888888888
Q ss_pred cchhhhccccceeccCCcccCCCCCC--CCCCCCeEEecccCCCCCCCcc--ccCCCCCCCCCCCCCCCCCCCCCCC
Q 005693 205 QSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSS--LQKFPNSSFVGNSLLCGPPLKACFP 277 (682)
Q Consensus 205 ~~~~~l~~L~~L~l~~N~l~g~~p~~--~l~~L~~l~ls~N~l~g~~p~~--~~~l~~l~~~~n~~~~~~~l~~c~~ 277 (682)
..|++|++|+.|+|++|+++|.+|.. .+++|+.|||++|+|+|.+|.. +..++.+.|.+|+++||.|+..|..
T Consensus 674 ~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~~C~~ 750 (768)
T 3rgz_A 674 DEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLPRCDP 750 (768)
T ss_dssp GGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTSCCCCS
T ss_pred hHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhcCCCCcCCCC
Confidence 88888888888888888888888864 7888888888888888888864 5677778899999999988877743
No 260
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.82 E-value=7.6e-20 Score=184.83 Aligned_cols=151 Identities=25% Similarity=0.252 Sum_probs=126.0
Q ss_pred eEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecccccCCcCCCCcc--cccceeec
Q 005693 117 RVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDL 194 (682)
Q Consensus 117 ~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~--~~L~~L~l 194 (682)
.+..|+|++|++++..+. .|+++++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|. ++|++|+|
T Consensus 36 ~l~~L~L~~n~l~~~~~~-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 114 (251)
T 3m19_A 36 DTEKLDLQSTGLATLSDA-TFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYL 114 (251)
T ss_dssp TCCEEECTTSCCCCCCTT-TTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCEEEccCCCcCccCHh-HhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEc
Confidence 477899999999865544 799999999999999999988888899999999999999999976666665 78999999
Q ss_pred ccccCcccCCcchhhhccccceeccCCcccCCCCCC--CCCCCCeEEecccCCCCCCCccccCCCCCCC---CCCCCCC
Q 005693 195 SFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSF---VGNSLLC 268 (682)
Q Consensus 195 s~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~l~~L~~l~ls~N~l~g~~p~~~~~l~~l~~---~~n~~~~ 268 (682)
++|+|++..+..|.++++|+.|+|++|+|++..+.. .+++|+.|+|++|++++..+..+.++++|+. .+|+..|
T Consensus 115 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 193 (251)
T 3m19_A 115 GGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDC 193 (251)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCT
T ss_pred CCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeC
Confidence 999999777777899999999999999999777743 7899999999999999777777777666554 4555544
No 261
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.79 E-value=3.6e-19 Score=177.31 Aligned_cols=148 Identities=27% Similarity=0.272 Sum_probs=69.5
Q ss_pred CCCCCCCCCCcceEEecCCC---------CeEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCC
Q 005693 96 WSSTNPICQSWVGINCTQDR---------TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPS 166 (682)
Q Consensus 96 w~~~~~~c~~w~gv~C~~~~---------~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~ 166 (682)
|......| +|.+|.|+... .+++.|+|++|++++..|. .|.++++|++|+|++|+|++..+..|.++++
T Consensus 12 ~~~~~~~C-s~~~v~c~~~~l~~ip~~~~~~L~~L~Ls~n~i~~~~~~-~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~ 89 (229)
T 3e6j_A 12 ACPSQCSC-SGTTVDCRSKRHASVPAGIPTNAQILYLHDNQITKLEPG-VFDSLINLKELYLGSNQLGALPVGVFDSLTQ 89 (229)
T ss_dssp CCCTTCEE-ETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTT-TTTTCTTCCEEECCSSCCCCCCTTTTTTCTT
T ss_pred cCCCCCEE-eCCEeEccCCCcCccCCCCCCCCCEEEcCCCccCccCHH-HhhCccCCcEEECCCCCCCCcChhhcccCCC
Confidence 44445556 89999997532 1234444444444433232 3444444444444444444333333444444
Q ss_pred CcEEeecccccCCcCCCCcc--cccceeecccccCcccCCcchhhhccccceeccCCcccCCCCCC--CCCCCCeEEecc
Q 005693 167 LRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSY 242 (682)
Q Consensus 167 L~~L~L~~N~l~g~~p~~~~--~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~l~~L~~l~ls~ 242 (682)
|++|+|++|+|++..+..|. ++|++|+|++|+|+ .+|..+.++++|+.|+|++|+|++..+.. .+++|+.|+|++
T Consensus 90 L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 168 (229)
T 3e6j_A 90 LTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFG 168 (229)
T ss_dssp CCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTT
T ss_pred cCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeC
Confidence 44444444444433333332 34444444444444 44444444444444444444444333321 344444444444
Q ss_pred cCCC
Q 005693 243 NGLK 246 (682)
Q Consensus 243 N~l~ 246 (682)
|.++
T Consensus 169 N~~~ 172 (229)
T 3e6j_A 169 NPWD 172 (229)
T ss_dssp SCBC
T ss_pred CCcc
Confidence 4444
No 262
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.79 E-value=3.8e-20 Score=193.46 Aligned_cols=143 Identities=22% Similarity=0.371 Sum_probs=74.3
Q ss_pred EEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCC-CCcEEeecccccCCcCCCCcc-cccceeecc
Q 005693 118 VFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLP-SLRYLYLQHNNFSGKIPSSFS-PQLVVLDLS 195 (682)
Q Consensus 118 v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~-~L~~L~L~~N~l~g~~p~~~~-~~L~~L~ls 195 (682)
+..|+|++|.+++.+|. .++.+++|++|+|++|+++|.+|..+++++ +|++|+|++|+++|.+|..+. .+|++|+|+
T Consensus 127 L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~L~~L~Ls 205 (313)
T 1ogq_A 127 LVTLDFSYNALSGTLPP-SISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLS 205 (313)
T ss_dssp CCEEECCSSEEESCCCG-GGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEECC
T ss_pred CCEEeCCCCccCCcCCh-HHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCcccEEECc
Confidence 44444444444444444 344444444444444444444444444444 444444444444444444443 225555555
Q ss_pred cccCcccCCcchhhhccccceeccCCcccCCCCCC-CCCCCCeEEecccCCCCCCCccccCCCCCCC
Q 005693 196 FNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF-DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSF 261 (682)
Q Consensus 196 ~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~-~l~~L~~l~ls~N~l~g~~p~~~~~l~~l~~ 261 (682)
+|++++.+|..|+++++|+.|+|++|++++.+|.. .+++|++|+|++|+++|.+|..+.++++|+.
T Consensus 206 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~ 272 (313)
T 1ogq_A 206 RNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHS 272 (313)
T ss_dssp SSEEEECCGGGCCTTSCCSEEECCSSEECCBGGGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCE
T ss_pred CCcccCcCCHHHhcCCCCCEEECCCCceeeecCcccccCCCCEEECcCCcccCcCChHHhcCcCCCE
Confidence 55555555555555666666666666665555543 4556666666666666666665555554443
No 263
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.77 E-value=1.7e-18 Score=169.65 Aligned_cols=146 Identities=26% Similarity=0.282 Sum_probs=114.2
Q ss_pred CCcceEEecCCC---------CeEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecc
Q 005693 104 QSWVGINCTQDR---------TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQH 174 (682)
Q Consensus 104 ~~w~gv~C~~~~---------~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~ 174 (682)
|.|.+|.|+... .+++.|+|++|+++ .+++..++++++|++|+|++|++++..+..|.++++|++|+|++
T Consensus 7 C~~~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~ 85 (208)
T 2o6s_A 7 CSGTTVECYSQGRTSVPTGIPAQTTYLDLETNSLK-SLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLST 85 (208)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred ECCCEEEecCCCccCCCCCCCCCCcEEEcCCCccC-cCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCC
Confidence 389999998632 25788888888888 45555688888888888888888866666678888888888888
Q ss_pred cccCCcCCCCcc--cccceeecccccCcccCCcchhhhccccceeccCCcccCCCCCC--CCCCCCeEEecccCCCCCCC
Q 005693 175 NNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIP 250 (682)
Q Consensus 175 N~l~g~~p~~~~--~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~l~~L~~l~ls~N~l~g~~p 250 (682)
|++++..+..+. ++|++|+|++|+|++..+..|.++++|+.|+|++|++++..+.. .+++|+.|+|++|.+.+..|
T Consensus 86 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 165 (208)
T 2o6s_A 86 NQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 165 (208)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCTT
T ss_pred CcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecCCC
Confidence 888865555554 68888888888888777777888888888888888888766653 67888888888887775443
No 264
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.77 E-value=1.3e-18 Score=177.80 Aligned_cols=146 Identities=25% Similarity=0.286 Sum_probs=102.5
Q ss_pred eEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecccccCCcCCCCcc--cccceeec
Q 005693 117 RVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDL 194 (682)
Q Consensus 117 ~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~--~~L~~L~l 194 (682)
.++.|+|++|+++ .+++..|+++++|++|+|++|+++...+..|.++++|++|+|++|++++..+..|. ++|++|+|
T Consensus 38 ~l~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 116 (270)
T 2o6q_A 38 DTKKLDLQSNKLS-SLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRL 116 (270)
T ss_dssp TCSEEECCSSCCS-CCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEEC
T ss_pred CCCEEECcCCCCC-eeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEEC
Confidence 3566777777776 34444677777788888877777754445567777788888888777755544444 67778888
Q ss_pred ccccCcccCCcchhhhccccceeccCCcccCCCCCC--CCCCCCeEEecccCCCCCCCccccCCCCCCCCC
Q 005693 195 SFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFVG 263 (682)
Q Consensus 195 s~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~l~~L~~l~ls~N~l~g~~p~~~~~l~~l~~~~ 263 (682)
++|++++..|..|+++++|+.|+|++|+|++..+.. .+++|+.|+|++|++++..+..|.++++|+.++
T Consensus 117 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 187 (270)
T 2o6q_A 117 DRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLK 187 (270)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEE
T ss_pred CCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEE
Confidence 888777777777777777888888888777655542 677777888887777765555666666665543
No 265
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.77 E-value=7.1e-19 Score=174.01 Aligned_cols=146 Identities=20% Similarity=0.258 Sum_probs=98.9
Q ss_pred EEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCC-CcCCCCCCCcEEeecccccCCcCCCCcc--cccceeeccc
Q 005693 120 GLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLP-SEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSF 196 (682)
Q Consensus 120 ~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p-~~~~~l~~L~~L~L~~N~l~g~~p~~~~--~~L~~L~ls~ 196 (682)
.+++++|+++ .+|. .+. ..+++|+|++|+|++..| ..|.++++|++|+|++|+|++..|..|. ++|++|+|++
T Consensus 15 ~l~~s~n~l~-~iP~-~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 15 TVDCSNQKLN-KIPE-HIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp EEECCSSCCS-SCCS-CCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred EeEeCCCCcc-cCcc-CCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 4666666666 4665 232 345677777777776544 3467777777777777777766665665 6777777777
Q ss_pred ccCcccCCcchhhhccccceeccCCcccCCCCCC--CCCCCCeEEecccCCCCCCCccccCCCCCC---CCCCCCCCC
Q 005693 197 NSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSS---FVGNSLLCG 269 (682)
Q Consensus 197 N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~l~~L~~l~ls~N~l~g~~p~~~~~l~~l~---~~~n~~~~~ 269 (682)
|+|++..|..|.++++|++|+|++|+|++..|.. .+++|+.|+|++|++++..|..|..+++|. +.+|+..|.
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 168 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCN 168 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECS
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCC
Confidence 7777766667777777777777777777766653 677777777777777776677766665554 335555443
No 266
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.76 E-value=1.9e-18 Score=170.89 Aligned_cols=144 Identities=24% Similarity=0.304 Sum_probs=87.2
Q ss_pred EEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecccccCCcCCCCcc--cccceeeccccc
Q 005693 121 LRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNS 198 (682)
Q Consensus 121 l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~--~~L~~L~ls~N~ 198 (682)
+++++++++ .+|. .+. ++|+.|+|++|+|++..+..|.++++|++|+|++|+|++..|..|. ++|++|+|++|+
T Consensus 16 v~c~~~~l~-~iP~-~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~ 91 (220)
T 2v9t_B 16 VDCRGKGLT-EIPT-NLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 91 (220)
T ss_dssp EECTTSCCS-SCCS-SCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSC
T ss_pred EEcCCCCcC-cCCC-ccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCc
Confidence 334445555 4554 232 5666666666666655555666666666666666666666666665 566666666666
Q ss_pred CcccCCcchhhhccccceeccCCcccCCCCCC--CCCCCCeEEecccCCCCCCCccccCCCCCC---CCCCCCCC
Q 005693 199 FTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSS---FVGNSLLC 268 (682)
Q Consensus 199 l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~l~~L~~l~ls~N~l~g~~p~~~~~l~~l~---~~~n~~~~ 268 (682)
|++..+..|.++++|+.|+|++|+|++..|.. .+++|+.|+|++|+|++..+..|..+++|+ +.+|++.|
T Consensus 92 l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 92 ITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 66554455666666666777776666655543 566666677777766655555555544443 33455544
No 267
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.74 E-value=4.3e-18 Score=172.66 Aligned_cols=132 Identities=14% Similarity=0.160 Sum_probs=102.5
Q ss_pred hccccccCeEEEEEEEE-cCCce--EEEEEeeccccC-------------------------hhhHHHHHHHHHHhcCCC
Q 005693 390 AEVLGKGSYGTAYKAVL-EESTT--VVVKRLKEVVVG-------------------------KRDFEQQMEIVGRVGQHP 441 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~-~~~~~--vavK~l~~~~~~-------------------------~~~~~~e~~~l~~l~~h~ 441 (682)
.+.||+|+||.||+|.. .+|+. ||||+++..... ...+.+|+.++.++ +|+
T Consensus 52 ~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~ 130 (258)
T 1zth_A 52 GGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA-KEA 130 (258)
T ss_dssp EEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH-HHT
T ss_pred CCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH-HhC
Confidence 46799999999999997 67888 999987543111 12578899999998 666
Q ss_pred ce--eceEEEEEecCceEEEEeeccC-C----chhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHH-hcCCCCcEec
Q 005693 442 NV--VPLRAYYYSKDEKLLVYDYFAS-G----SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIH-SMGGPKFTHG 513 (682)
Q Consensus 442 ni--v~l~~~~~~~~~~~lV~e~~~~-g----~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH-~~~~~~ivHr 513 (682)
++ +..++. +..++||||+.+ | +|.++... .++..+..++.|++.||.||| +.+ |+||
T Consensus 131 ~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~--------~~~~~~~~i~~qi~~~l~~lH~~~g---ivHr 195 (258)
T 1zth_A 131 GVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE--------LKELDVEGIFNDVVENVKRLYQEAE---LVHA 195 (258)
T ss_dssp TCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG--------GGGSCHHHHHHHHHHHHHHHHHTSC---EECS
T ss_pred CCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc--------cChHHHHHHHHHHHHHHHHHHHHCC---EEeC
Confidence 53 444432 367899999942 4 66666432 224467789999999999999 887 9999
Q ss_pred CCCCCCeEecCCCCeEEeecCCCCCC
Q 005693 514 NIKASNVLINQDLDGCISDFGLTPLM 539 (682)
Q Consensus 514 DLk~~NILl~~~~~~kl~DfGla~~~ 539 (682)
||||+|||+++ .++|+|||+|...
T Consensus 196 Dlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 196 DLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp SCSTTSEEESS--SEEECCCTTCEET
T ss_pred CCCHHHEEEcC--cEEEEECcccccC
Confidence 99999999998 9999999998754
No 268
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.74 E-value=8.7e-18 Score=166.16 Aligned_cols=147 Identities=20% Similarity=0.193 Sum_probs=131.9
Q ss_pred CCcceEEecCCC---------CeEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecc
Q 005693 104 QSWVGINCTQDR---------TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQH 174 (682)
Q Consensus 104 ~~w~gv~C~~~~---------~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~ 174 (682)
|.|..+.|++.. ..++.|+|++|++++..|.+.|+.+++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 11 C~~~~l~~s~n~l~~iP~~~~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 11 CEGTTVDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred ECCCEeEeCCCCcccCccCCCCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 379999997632 24678999999999776766799999999999999999988888999999999999999
Q ss_pred cccCCcCCCCcc--cccceeecccccCcccCCcchhhhccccceeccCCcccCCCCCC--CCCCCCeEEecccCCCCCCC
Q 005693 175 NNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIP 250 (682)
Q Consensus 175 N~l~g~~p~~~~--~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~l~~L~~l~ls~N~l~g~~p 250 (682)
|+|++..|..|. ++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..|.. .+++|+.|+|++|.+++..+
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 999988777776 89999999999999999999999999999999999999987864 89999999999999987544
No 269
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.74 E-value=1.8e-17 Score=169.39 Aligned_cols=151 Identities=26% Similarity=0.307 Sum_probs=131.9
Q ss_pred CeEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecccccCCcCCCCcc--cccceee
Q 005693 116 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLD 193 (682)
Q Consensus 116 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~--~~L~~L~ 193 (682)
.++..|+|++|++++ ++ .++.+++|++|+|++|++++..|..|.++++|++|+|++|++++..|..+. ++|++|+
T Consensus 63 ~~L~~L~l~~n~l~~-~~--~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 139 (272)
T 3rfs_A 63 PNVRYLALGGNKLHD-IS--ALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLN 139 (272)
T ss_dssp TTCCEEECTTSCCCC-CG--GGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCcEEECCCCCCCC-ch--hhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEE
Confidence 468899999999986 44 699999999999999999988888899999999999999999987776665 7999999
Q ss_pred cccccCcccCCcchhhhccccceeccCCcccCCCCCC--CCCCCCeEEecccCCCCCCCccccCCCCCCCC---CCCCCC
Q 005693 194 LSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFV---GNSLLC 268 (682)
Q Consensus 194 ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~l~~L~~l~ls~N~l~g~~p~~~~~l~~l~~~---~n~~~~ 268 (682)
|++|+|++..|..|+++++|+.|+|++|++++..+.. .+++|+.|+|++|++++..|..+.++++|+.+ +|+..|
T Consensus 140 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 219 (272)
T 3rfs_A 140 LAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC 219 (272)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccc
Confidence 9999999888888999999999999999999877754 78999999999999998888777777776654 555544
Q ss_pred C
Q 005693 269 G 269 (682)
Q Consensus 269 ~ 269 (682)
.
T Consensus 220 ~ 220 (272)
T 3rfs_A 220 T 220 (272)
T ss_dssp C
T ss_pred c
Confidence 3
No 270
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.74 E-value=1e-17 Score=165.63 Aligned_cols=143 Identities=22% Similarity=0.229 Sum_probs=127.4
Q ss_pred CCcceEEecCCC---------CeEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecc
Q 005693 104 QSWVGINCTQDR---------TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQH 174 (682)
Q Consensus 104 ~~w~gv~C~~~~---------~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~ 174 (682)
|.|..|.|++.. ..++.|+|++|++++ +++..|..+++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 11 C~~~~v~c~~~~l~~iP~~l~~~l~~L~l~~n~i~~-i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~ 89 (220)
T 2v9t_B 11 CSNNIVDCRGKGLTEIPTNLPETITEIRLEQNTIKV-IPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYG 89 (220)
T ss_dssp EETTEEECTTSCCSSCCSSCCTTCCEEECCSSCCCE-ECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCS
T ss_pred ECCCEEEcCCCCcCcCCCccCcCCCEEECCCCcCCC-cCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCC
Confidence 479999998632 368999999999995 5555899999999999999999988899999999999999999
Q ss_pred cccCCcCCCCcc--cccceeecccccCcccCCcchhhhccccceeccCCcccCCCCCC--CCCCCCeEEecccCCCC
Q 005693 175 NNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKG 247 (682)
Q Consensus 175 N~l~g~~p~~~~--~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~l~~L~~l~ls~N~l~g 247 (682)
|+|++..+..|. ++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..+.. .+++|+.|+|++|.+..
T Consensus 90 N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 90 NKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 999955444454 89999999999999999999999999999999999999887763 78999999999999974
No 271
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.73 E-value=3.8e-18 Score=179.48 Aligned_cols=144 Identities=26% Similarity=0.393 Sum_probs=126.7
Q ss_pred CeEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecccccCCcCCCCc----------
Q 005693 116 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSF---------- 185 (682)
Q Consensus 116 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~---------- 185 (682)
.++..|+|++|+++ .+|. .++++++|++|+|++|+++ .+|..++++++|++|+|++|++.+.+|..+
T Consensus 104 ~~L~~L~L~~n~l~-~lp~-~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~ 180 (328)
T 4fcg_A 104 SHLQHMTIDAAGLM-ELPD-TMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQ 180 (328)
T ss_dssp TTCSEEEEESSCCC-CCCS-CGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEE
T ss_pred CCCCEEECCCCCcc-chhH-HHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhc
Confidence 36888999999998 8887 7899999999999999999 889899999999999999999999999877
Q ss_pred -ccccceeecccccCcccCCcchhhhccccceeccCCcccCCCCCC-CCCCCCeEEecccCCCCCCCccccCCCCCCCCC
Q 005693 186 -SPQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF-DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFVG 263 (682)
Q Consensus 186 -~~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~-~l~~L~~l~ls~N~l~g~~p~~~~~l~~l~~~~ 263 (682)
.++|++|+|++|+|+ .+|..++++++|+.|+|++|++++.++.. .+++|+.|+|++|++.+.+|..++++++|+.++
T Consensus 181 ~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~ 259 (328)
T 4fcg_A 181 GLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLI 259 (328)
T ss_dssp ESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCCCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEE
T ss_pred cCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCcCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEE
Confidence 368999999999999 88888999999999999999999755554 788999999999999999999888888877664
No 272
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.73 E-value=3.1e-17 Score=167.52 Aligned_cols=153 Identities=24% Similarity=0.287 Sum_probs=132.6
Q ss_pred CeEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecccccCCcCCCCcc--cccceee
Q 005693 116 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLD 193 (682)
Q Consensus 116 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~--~~L~~L~ 193 (682)
.++..|+|++|+++ .+|+..|.++++|++|+|++|++++..+..|.++++|++|+|++|++++..|..|. ++|++|+
T Consensus 61 ~~L~~L~l~~n~l~-~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 139 (270)
T 2o6q_A 61 TKLRLLYLNDNKLQ-TLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLS 139 (270)
T ss_dssp TTCCEEECCSSCCS-CCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCccC-eeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEE
Confidence 46889999999998 67776789999999999999999977777889999999999999999987777765 8999999
Q ss_pred cccccCcccCCcchhhhccccceeccCCcccCCCCCC--CCCCCCeEEecccCCCCCCCccccCCCCCC---CCCCCCCC
Q 005693 194 LSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSS---FVGNSLLC 268 (682)
Q Consensus 194 ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~l~~L~~l~ls~N~l~g~~p~~~~~l~~l~---~~~n~~~~ 268 (682)
|++|+|++..+..|..+++|+.|+|++|++++..+.. .+++|+.|+|++|++++..+..+..+++|+ +.+|++.|
T Consensus 140 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 219 (270)
T 2o6q_A 140 LGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDC 219 (270)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeC
Confidence 9999999877778999999999999999999877653 789999999999999976666677666654 55666655
Q ss_pred C
Q 005693 269 G 269 (682)
Q Consensus 269 ~ 269 (682)
.
T Consensus 220 ~ 220 (270)
T 2o6q_A 220 T 220 (270)
T ss_dssp S
T ss_pred C
Confidence 4
No 273
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.72 E-value=3.3e-18 Score=182.39 Aligned_cols=166 Identities=28% Similarity=0.275 Sum_probs=140.2
Q ss_pred CCcceEEecCCC---------CeEEEEEeCCCcccccCCccccC-CCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeec
Q 005693 104 QSWVGINCTQDR---------TRVFGLRLPGIGLVGPIPNNTLG-KLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQ 173 (682)
Q Consensus 104 ~~w~gv~C~~~~---------~~v~~l~l~~~~l~g~lp~~~~~-~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~ 173 (682)
|.|..|.|+... ..++.|+|++|++++ +++..+. ++++|+.|+|++|+|++..|..|.++++|++|+|+
T Consensus 18 C~~~~l~c~~~~l~~iP~~~~~~l~~L~Ls~N~l~~-l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 96 (361)
T 2xot_A 18 CASNILSCSKQQLPNVPQSLPSYTALLDLSHNNLSR-LRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLS 96 (361)
T ss_dssp EETTEEECCSSCCSSCCSSCCTTCSEEECCSSCCCE-ECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred ECCCEEEeCCCCcCccCccCCCCCCEEECCCCCCCc-cChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECC
Confidence 378889997532 247789999999995 5554777 99999999999999998888889999999999999
Q ss_pred ccccCCcCCCCcc--cccceeecccccCcccCCcchhhhccccceeccCCcccCCCCCC-----CCCCCCeEEecccCCC
Q 005693 174 HNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF-----DIPKLRHLNLSYNGLK 246 (682)
Q Consensus 174 ~N~l~g~~p~~~~--~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~-----~l~~L~~l~ls~N~l~ 246 (682)
+|+|++..+..|. ++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..+.. .+++|+.|+|++|+|+
T Consensus 97 ~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~ 176 (361)
T 2xot_A 97 SNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLK 176 (361)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCC
T ss_pred CCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCC
Confidence 9999977666666 89999999999999999999999999999999999999755442 5899999999999999
Q ss_pred CCCCccccCCC-----CCCCCCCCCCCCC
Q 005693 247 GSIPSSLQKFP-----NSSFVGNSLLCGP 270 (682)
Q Consensus 247 g~~p~~~~~l~-----~l~~~~n~~~~~~ 270 (682)
+..+..+..++ .|.+.+|++.|.+
T Consensus 177 ~l~~~~~~~l~~~~l~~l~l~~N~~~C~C 205 (361)
T 2xot_A 177 KLPLTDLQKLPAWVKNGLYLHNNPLECDC 205 (361)
T ss_dssp CCCHHHHHHSCHHHHTTEECCSSCEECCH
T ss_pred ccCHHHhhhccHhhcceEEecCCCccCCc
Confidence 65556666664 4677788888764
No 274
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.72 E-value=3.9e-17 Score=162.51 Aligned_cols=153 Identities=25% Similarity=0.340 Sum_probs=128.3
Q ss_pred cceEEecCCCCeEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecccccCCcCCCCc
Q 005693 106 WVGINCTQDRTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSF 185 (682)
Q Consensus 106 w~gv~C~~~~~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~ 185 (682)
|..-.|+. +.++.+++++. .+|.+ + .++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|
T Consensus 14 ~~~~~Cs~-----~~v~c~~~~l~-~ip~~-~--~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~ 84 (229)
T 3e6j_A 14 PSQCSCSG-----TTVDCRSKRHA-SVPAG-I--PTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVF 84 (229)
T ss_dssp CTTCEEET-----TEEECTTSCCS-SCCSC-C--CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTT
T ss_pred CCCCEEeC-----CEeEccCCCcC-ccCCC-C--CCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhc
Confidence 45556764 45899999987 78873 3 3899999999999999999999999999999999999985555555
Q ss_pred c--cccceeecccccCcccCCcchhhhccccceeccCCcccCCCCCC--CCCCCCeEEecccCCCCCCCccccCCCCCCC
Q 005693 186 S--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSF 261 (682)
Q Consensus 186 ~--~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~l~~L~~l~ls~N~l~g~~p~~~~~l~~l~~ 261 (682)
. ++|++|+|++|+|++..+..|..+++|+.|+|++|+|+ .+|.. .+++|+.|+|++|+|++..+..|.++++|+.
T Consensus 85 ~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 163 (229)
T 3e6j_A 85 DSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTH 163 (229)
T ss_dssp TTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred ccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCE
Confidence 5 89999999999999888888999999999999999999 55653 8999999999999999776677777776654
Q ss_pred ---CCCCCCC
Q 005693 262 ---VGNSLLC 268 (682)
Q Consensus 262 ---~~n~~~~ 268 (682)
.+|+..|
T Consensus 164 L~l~~N~~~c 173 (229)
T 3e6j_A 164 AYLFGNPWDC 173 (229)
T ss_dssp EECTTSCBCT
T ss_pred EEeeCCCccC
Confidence 4566554
No 275
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.70 E-value=3.1e-17 Score=168.73 Aligned_cols=145 Identities=23% Similarity=0.200 Sum_probs=78.4
Q ss_pred eEEEEEeCCCcccccCCccccCCCCCCcEEEccCCC-CCCCCCCcCCCCCCCcEEeecccccCCcCCCCcc--cccceee
Q 005693 117 RVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNV-LTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLD 193 (682)
Q Consensus 117 ~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~-l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~--~~L~~L~ 193 (682)
+++.|+|++|.+++..|. .|+++++|++|+|++|. ++...|..+.++++|++|+|++|++++..|..+. ++|++|+
T Consensus 57 ~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 135 (285)
T 1ozn_A 57 NLTILWLHSNVLARIDAA-AFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLY 135 (285)
T ss_dssp TCCEEECCSSCCCEECTT-TTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCEEECCCCccceeCHh-hcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEE
Confidence 455555555555543333 45555556666666554 4444455555555566666665555554454443 4555555
Q ss_pred cccccCcccCCcchhhhccccceeccCCcccCCCCCC--CCCCCCeEEecccCCCCCCCccccCCCCCCCC
Q 005693 194 LSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFV 262 (682)
Q Consensus 194 ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~l~~L~~l~ls~N~l~g~~p~~~~~l~~l~~~ 262 (682)
|++|++++..+..|+++++|+.|+|++|++++..+.. .+++|+.|+|++|++++..|..+.++++|+.+
T Consensus 136 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 206 (285)
T 1ozn_A 136 LQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTL 206 (285)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEE
T ss_pred CCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEe
Confidence 5555555444445555555555555555555444331 45555555555555555555555555444433
No 276
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.70 E-value=7.6e-18 Score=162.85 Aligned_cols=127 Identities=27% Similarity=0.318 Sum_probs=111.4
Q ss_pred EEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCC-cCCCCCCCcEEeecccccCCcCCCCcc--cccceeeccc
Q 005693 120 GLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPS-EITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSF 196 (682)
Q Consensus 120 ~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~-~~~~l~~L~~L~L~~N~l~g~~p~~~~--~~L~~L~ls~ 196 (682)
.++++++++. .+|. .+.. +|++|+|++|+|++..+. .|.++++|++|+|++|+|++..|..|. ++|++|+|++
T Consensus 12 ~l~~s~~~l~-~ip~-~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 12 TVDCTGRGLK-EIPR-DIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp EEECTTSCCS-SCCS-CCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred EEEcCCCCcC-cCcc-CCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 5677778885 7887 3433 899999999999976664 489999999999999999998898887 7999999999
Q ss_pred ccCcccCCcchhhhccccceeccCCcccCCCCCC--CCCCCCeEEecccCCCCCCC
Q 005693 197 NSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIP 250 (682)
Q Consensus 197 N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~l~~L~~l~ls~N~l~g~~p 250 (682)
|+|++..|..|.++++|+.|+|++|+|++.+|.. .+++|++|+|++|.+++..+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 9999999999999999999999999999988864 88999999999999998665
No 277
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.69 E-value=1.2e-17 Score=191.06 Aligned_cols=153 Identities=20% Similarity=0.218 Sum_probs=131.3
Q ss_pred ceEEecCCC---------CeEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeeccccc
Q 005693 107 VGINCTQDR---------TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNF 177 (682)
Q Consensus 107 ~gv~C~~~~---------~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l 177 (682)
..|.|+..+ ..++.|+|++|+|+ .+|+..|+++++|++|||++|+|++..|..|.+|++|++|+|++|+|
T Consensus 34 ~~~~c~~~~l~~vP~~lp~~~~~LdLs~N~i~-~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l 112 (635)
T 4g8a_A 34 ITYQCMELNFYKIPDNLPFSTKNLDLSFNPLR-HLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPI 112 (635)
T ss_dssp TEEECTTSCCSSCCSSSCTTCCEEECTTSCCC-EECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred CEEECCCCCcCccCCCCCcCCCEEEeeCCCCC-CCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcC
Confidence 357787532 36899999999999 56666899999999999999999977788899999999999999999
Q ss_pred CCcCCCCcc--cccceeecccccCcccCCcchhhhccccceeccCCcccCC-CCCC--CCCCCCeEEecccCCCCCCCcc
Q 005693 178 SGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGS-IPNF--DIPKLRHLNLSYNGLKGSIPSS 252 (682)
Q Consensus 178 ~g~~p~~~~--~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~-~p~~--~l~~L~~l~ls~N~l~g~~p~~ 252 (682)
++..|..|. ++|++|+|++|+|++..+..|++|++|+.|+|++|++++. +|.. .+++|++|+|++|++++..|..
T Consensus 113 ~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 192 (635)
T 4g8a_A 113 QSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTD 192 (635)
T ss_dssp CEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGG
T ss_pred CCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCcccccccccc
Confidence 976666666 7999999999999988888899999999999999999864 4553 7899999999999999888888
Q ss_pred ccCCCCCC
Q 005693 253 LQKFPNSS 260 (682)
Q Consensus 253 ~~~l~~l~ 260 (682)
+..+.++.
T Consensus 193 l~~L~~l~ 200 (635)
T 4g8a_A 193 LRVLHQMP 200 (635)
T ss_dssp GHHHHTCT
T ss_pred ccchhhhh
Confidence 77665544
No 278
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.69 E-value=2.1e-17 Score=171.85 Aligned_cols=155 Identities=23% Similarity=0.285 Sum_probs=92.5
Q ss_pred CCcceEEecCCC---------CeEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCC--CCCCcCCCCCCCcEEee
Q 005693 104 QSWVGINCTQDR---------TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTG--GLPSEITSLPSLRYLYL 172 (682)
Q Consensus 104 ~~w~gv~C~~~~---------~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g--~~p~~~~~l~~L~~L~L 172 (682)
|.|.+|.|+... .+++.|+|++|+++ .+|+..|+++++|++|+|++|+++. .+|..+.++++|++|+|
T Consensus 7 C~~~~l~c~~~~l~~ip~~~~~~l~~L~L~~n~l~-~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L 85 (306)
T 2z66_A 7 CSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQ-SLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDL 85 (306)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEEC
T ss_pred eCCCEEEcCCCCcccCCCCCCCCCCEEECCCCccC-ccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEEC
Confidence 489999998632 36899999999998 7887678999999999999999873 22444555566666666
Q ss_pred cccccCCcCCCCcc--cccceeecccccCcccCC-cchhhhccccceeccCCcccCCCCCC--CCCCCCeEEecccCCCC
Q 005693 173 QHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIP-QSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKG 247 (682)
Q Consensus 173 ~~N~l~g~~p~~~~--~~L~~L~ls~N~l~g~~p-~~~~~l~~L~~L~l~~N~l~g~~p~~--~l~~L~~l~ls~N~l~g 247 (682)
++|.++ .+|..+. ++|++|+|++|++++..+ ..+.++++|+.|+|++|++++..|.. .+++|+.|+|++|.+++
T Consensus 86 s~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 164 (306)
T 2z66_A 86 SFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQE 164 (306)
T ss_dssp CSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGG
T ss_pred CCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCcccc
Confidence 666555 2333332 445555555555543333 34444555555555555554444432 44445555555554443
Q ss_pred -CCCccccCCCCCC
Q 005693 248 -SIPSSLQKFPNSS 260 (682)
Q Consensus 248 -~~p~~~~~l~~l~ 260 (682)
.+|..+.++++|+
T Consensus 165 ~~~~~~~~~l~~L~ 178 (306)
T 2z66_A 165 NFLPDIFTELRNLT 178 (306)
T ss_dssp GEECSCCTTCTTCC
T ss_pred ccchhHHhhCcCCC
Confidence 2344444444433
No 279
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.69 E-value=6.9e-17 Score=166.16 Aligned_cols=147 Identities=24% Similarity=0.233 Sum_probs=126.7
Q ss_pred CeEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecccc-cCCcCCCCcc--ccccee
Q 005693 116 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNN-FSGKIPSSFS--PQLVVL 192 (682)
Q Consensus 116 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~-l~g~~p~~~~--~~L~~L 192 (682)
.+++.|+|++|++++ +++..|+++++|++|+|++|.+++..|..|.++++|++|+|++|+ +++..|..+. ++|++|
T Consensus 32 ~~l~~L~l~~n~i~~-~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L 110 (285)
T 1ozn_A 32 AASQRIFLHGNRISH-VPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTL 110 (285)
T ss_dssp TTCSEEECTTSCCCE-ECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEE
T ss_pred CCceEEEeeCCcCCc-cCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEE
Confidence 368899999999985 554479999999999999999998889999999999999999997 7766677776 799999
Q ss_pred ecccccCcccCCcchhhhccccceeccCCcccCCCCCC--CCCCCCeEEecccCCCCCCCccccCCCCCCCCC
Q 005693 193 DLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFVG 263 (682)
Q Consensus 193 ~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~l~~L~~l~ls~N~l~g~~p~~~~~l~~l~~~~ 263 (682)
+|++|++++..|..|.++++|+.|+|++|++++..+.. .+++|+.|+|++|++++..+..+.++++|+.++
T Consensus 111 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 183 (285)
T 1ozn_A 111 HLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLL 183 (285)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred ECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEE
Confidence 99999999888999999999999999999999777653 789999999999999976666688777776554
No 280
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.69 E-value=8.4e-17 Score=155.48 Aligned_cols=154 Identities=25% Similarity=0.254 Sum_probs=122.9
Q ss_pred CCcceEEecCCC---------CeEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecc
Q 005693 104 QSWVGINCTQDR---------TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQH 174 (682)
Q Consensus 104 ~~w~gv~C~~~~---------~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~ 174 (682)
|.|..+.|+... .+++.|+|++|++++..+.+.++.+++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 8 C~~~~l~~s~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 8 CEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp EETTEEECTTSCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred ECCCEEEcCCCCcCcCccCCCCCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 379999998632 36889999999998655544589999999999999999999999999999999999999
Q ss_pred cccCCcCCCCcc--cccceeecccccCcccCCcchhhhccccceeccCCcccCCCCCCCC-CCCCeEEecccCCCCCCCc
Q 005693 175 NNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNFDI-PKLRHLNLSYNGLKGSIPS 251 (682)
Q Consensus 175 N~l~g~~p~~~~--~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~l-~~L~~l~ls~N~l~g~~p~ 251 (682)
|+|++..|..|. ++|++|+|++|+|++.+|..|..+++|+.|+|++|.+++..+...+ ..|+...+..+......|.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~~P~ 167 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAPS 167 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCSST
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCCCCh
Confidence 999988887776 8999999999999999999999999999999999999986653211 1122223344445445555
Q ss_pred cccCCC
Q 005693 252 SLQKFP 257 (682)
Q Consensus 252 ~~~~l~ 257 (682)
.+....
T Consensus 168 ~l~~~~ 173 (192)
T 1w8a_A 168 KVRDVQ 173 (192)
T ss_dssp TTTTSB
T ss_pred HHcCCC
Confidence 554443
No 281
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.69 E-value=1.7e-16 Score=160.15 Aligned_cols=154 Identities=24% Similarity=0.316 Sum_probs=135.6
Q ss_pred CCCcceEEecCCCCeEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecccccCCcCC
Q 005693 103 CQSWVGINCTQDRTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIP 182 (682)
Q Consensus 103 c~~w~gv~C~~~~~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p 182 (682)
|..|.|+.|.. ....+++++++++ .+|. .+. ++|+.|+|++|++++..|..|.++++|++|+|++|+|++..|
T Consensus 4 Cp~~~gC~C~~---~~~~l~~~~~~l~-~~p~-~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 76 (251)
T 3m19_A 4 CETVTGCTCNE---GKKEVDCQGKSLD-SVPS-GIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSA 76 (251)
T ss_dssp CHHHHSSEEEG---GGTEEECTTCCCS-SCCS-CCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCT
T ss_pred CCCCCceEcCC---CCeEEecCCCCcc-ccCC-CCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCH
Confidence 55899999964 2346899999998 7887 344 689999999999999889899999999999999999998888
Q ss_pred CCcc--cccceeecccccCcccCCcchhhhccccceeccCCcccCCCCCC--CCCCCCeEEecccCCCCCCCccccCCCC
Q 005693 183 SSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPN 258 (682)
Q Consensus 183 ~~~~--~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~l~~L~~l~ls~N~l~g~~p~~~~~l~~ 258 (682)
..|. ++|++|+|++|+|++..+..|.++++|+.|+|++|+|++..+.. .+++|+.|+|++|++++..+..|+++++
T Consensus 77 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 156 (251)
T 3m19_A 77 GVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTN 156 (251)
T ss_dssp TTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTT
T ss_pred hHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcC
Confidence 7776 89999999999999888889999999999999999999777753 7999999999999999777778888888
Q ss_pred CCCCC
Q 005693 259 SSFVG 263 (682)
Q Consensus 259 l~~~~ 263 (682)
|+.++
T Consensus 157 L~~L~ 161 (251)
T 3m19_A 157 LQTLS 161 (251)
T ss_dssp CCEEE
T ss_pred CCEEE
Confidence 77664
No 282
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.69 E-value=1.2e-17 Score=188.19 Aligned_cols=157 Identities=24% Similarity=0.261 Sum_probs=137.0
Q ss_pred CCCcceEEecCCC-----------CeEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEe
Q 005693 103 CQSWVGINCTQDR-----------TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLY 171 (682)
Q Consensus 103 c~~w~gv~C~~~~-----------~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 171 (682)
| .|.|+ |+... .+++.|+|++|++++..|. .|+++++|++|+|++|++++..|..|+++++|++|+
T Consensus 4 C-~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~-~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 80 (549)
T 2z81_A 4 C-DASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHG-DLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLD 80 (549)
T ss_dssp E-CTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSS-TTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred C-CCCce-EECCCCccccccccCCCCccEEECcCCccCccChh-hhhcCCcccEEECCCCCcCccChhhccccccCCEEE
Confidence 5 79998 87431 3689999999999976665 799999999999999999988889999999999999
Q ss_pred ecccccCCcCCCCcc--cccceeecccccCcc-cCCcchhhhccccceeccCCcccCCCCC--C-CCCCCCeEEecccCC
Q 005693 172 LQHNNFSGKIPSSFS--PQLVVLDLSFNSFTG-NIPQSIQNLTQLTGLSLQSNNLSGSIPN--F-DIPKLRHLNLSYNGL 245 (682)
Q Consensus 172 L~~N~l~g~~p~~~~--~~L~~L~ls~N~l~g-~~p~~~~~l~~L~~L~l~~N~l~g~~p~--~-~l~~L~~l~ls~N~l 245 (682)
|++|++++..|..|. ++|++|+|++|++++ .+|..++++++|+.|+|++|++.+.+|. + .+++|++|++++|++
T Consensus 81 Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l 160 (549)
T 2z81_A 81 LSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSL 160 (549)
T ss_dssp CTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTC
T ss_pred CCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcc
Confidence 999999987776676 799999999999997 4678999999999999999996666663 2 889999999999999
Q ss_pred CCCCCccccCCCCCCCC
Q 005693 246 KGSIPSSLQKFPNSSFV 262 (682)
Q Consensus 246 ~g~~p~~~~~l~~l~~~ 262 (682)
++.+|..++++++|+.+
T Consensus 161 ~~~~~~~l~~l~~L~~L 177 (549)
T 2z81_A 161 RNYQSQSLKSIRDIHHL 177 (549)
T ss_dssp CEECTTTTTTCSEEEEE
T ss_pred cccChhhhhccccCceE
Confidence 99999998888776554
No 283
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.69 E-value=1.3e-16 Score=164.75 Aligned_cols=142 Identities=30% Similarity=0.312 Sum_probs=101.0
Q ss_pred eEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecccccCCcCCCCcc--cccceeec
Q 005693 117 RVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDL 194 (682)
Q Consensus 117 ~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~--~~L~~L~l 194 (682)
.++.|+|++|++++..+. .|.++++|++|+|++|+|++. |.. +.+++|++|+|++|+|+ .+|..+. ++|++|+|
T Consensus 32 ~l~~L~L~~N~l~~~~~~-~~~~l~~L~~L~L~~n~l~~~-~~~-~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l 107 (290)
T 1p9a_G 32 DTTILHLSENLLYTFSLA-TLMPYTRLTQLNLDRAELTKL-QVD-GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDV 107 (290)
T ss_dssp TCCEEECTTSCCSEEEGG-GGTTCTTCCEEECTTSCCCEE-ECC-SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEEC
T ss_pred CCCEEEcCCCcCCccCHH-HhhcCCCCCEEECCCCccCcc-cCC-CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEEC
Confidence 577788888888754444 688888888888888888743 332 67777888888888777 5666554 67778888
Q ss_pred ccccCcccCCcchhhhccccceeccCCcccCCCCCC--CCCCCCeEEecccCCCCCCCccccCCCCCCCC
Q 005693 195 SFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFV 262 (682)
Q Consensus 195 s~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~l~~L~~l~ls~N~l~g~~p~~~~~l~~l~~~ 262 (682)
++|+|++..|..|.++++|+.|+|++|+|++.++.. .+++|+.|+|++|+|++..+..|.++++|..+
T Consensus 108 ~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L 177 (290)
T 1p9a_G 108 SFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTL 177 (290)
T ss_dssp CSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEE
T ss_pred CCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEE
Confidence 888887666677777778888888888777655543 67777788888877775444455656655544
No 284
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.68 E-value=1.8e-17 Score=176.11 Aligned_cols=165 Identities=25% Similarity=0.243 Sum_probs=130.6
Q ss_pred CCCCCCCCCCcceEEecCC-----------CCeEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCC
Q 005693 96 WSSTNPICQSWVGINCTQD-----------RTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSL 164 (682)
Q Consensus 96 w~~~~~~c~~w~gv~C~~~-----------~~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l 164 (682)
|......| .|.|+ |+.. ..+++.|+|++|++++ +|+..++++++|++|+|++|++++..|..|.++
T Consensus 23 ~~~~~~~C-~~~~~-c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 99 (353)
T 2z80_A 23 SNQASLSC-DRNGI-CKGSSGSLNSIPSGLTEAVKSLDLSNNRITY-ISNSDLQRCVNLQALVLTSNGINTIEEDSFSSL 99 (353)
T ss_dssp ----CCEE-CTTSE-EECCSTTCSSCCTTCCTTCCEEECTTSCCCE-ECTTTTTTCTTCCEEECTTSCCCEECTTTTTTC
T ss_pred CCccCCCC-CCCeE-eeCCCCCcccccccccccCcEEECCCCcCcc-cCHHHhccCCCCCEEECCCCccCccCHhhcCCC
Confidence 44344445 79887 6532 1368899999999985 555579999999999999999998888889999
Q ss_pred CCCcEEeecccccCCcCCCCcc--cccceeecccccCcccCC-cchhhhccccceeccCCc-ccCCCCCC--CCCCCCeE
Q 005693 165 PSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIP-QSIQNLTQLTGLSLQSNN-LSGSIPNF--DIPKLRHL 238 (682)
Q Consensus 165 ~~L~~L~L~~N~l~g~~p~~~~--~~L~~L~ls~N~l~g~~p-~~~~~l~~L~~L~l~~N~-l~g~~p~~--~l~~L~~l 238 (682)
++|++|+|++|++++..+..+. ++|++|+|++|++++..+ ..+.++++|+.|++++|+ +.+..|.. .+++|+.|
T Consensus 100 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L 179 (353)
T 2z80_A 100 GSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEEL 179 (353)
T ss_dssp TTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEE
T ss_pred CCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEE
Confidence 9999999999999964444354 789999999999995444 488999999999999995 66554543 78899999
Q ss_pred EecccCCCCCCCccccCCCCCCCCC
Q 005693 239 NLSYNGLKGSIPSSLQKFPNSSFVG 263 (682)
Q Consensus 239 ~ls~N~l~g~~p~~~~~l~~l~~~~ 263 (682)
++++|++++..|..+.++++|+.++
T Consensus 180 ~l~~n~l~~~~~~~l~~l~~L~~L~ 204 (353)
T 2z80_A 180 EIDASDLQSYEPKSLKSIQNVSHLI 204 (353)
T ss_dssp EEEETTCCEECTTTTTTCSEEEEEE
T ss_pred ECCCCCcCccCHHHHhccccCCeec
Confidence 9999999988898888888776654
No 285
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.68 E-value=5.4e-16 Score=151.65 Aligned_cols=146 Identities=24% Similarity=0.292 Sum_probs=123.1
Q ss_pred EEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecccccCCcCCCCcc--cccceeeccc
Q 005693 119 FGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSF 196 (682)
Q Consensus 119 ~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~--~~L~~L~ls~ 196 (682)
+.++.++++++ .+|.. ..++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|. ++|++|+|++
T Consensus 10 ~~v~c~~~~l~-~~p~~---~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~ 85 (208)
T 2o6s_A 10 TTVECYSQGRT-SVPTG---IPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLST 85 (208)
T ss_dssp TEEECCSSCCS-SCCSC---CCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CEEEecCCCcc-CCCCC---CCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCC
Confidence 46888999988 67763 356899999999999977777789999999999999999966665555 8999999999
Q ss_pred ccCcccCCcchhhhccccceeccCCcccCCCCCC--CCCCCCeEEecccCCCCCCCccccCCCCCCC---CCCCCCC
Q 005693 197 NSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSF---VGNSLLC 268 (682)
Q Consensus 197 N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~l~~L~~l~ls~N~l~g~~p~~~~~l~~l~~---~~n~~~~ 268 (682)
|+|++..+..|.++++|+.|+|++|+|++..+.. .+++|+.|+|++|++++..+..+.++++|+. .+|+..|
T Consensus 86 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 162 (208)
T 2o6s_A 86 NQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC 162 (208)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC
T ss_pred CcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec
Confidence 9999877778999999999999999999877753 7999999999999999776666777776654 4565554
No 286
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.67 E-value=6.5e-17 Score=184.21 Aligned_cols=170 Identities=19% Similarity=0.164 Sum_probs=138.1
Q ss_pred cCCCCCCCCCCC---cceEEecCC----------------CCeEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCC
Q 005693 94 LNWSSTNPICQS---WVGINCTQD----------------RTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLT 154 (682)
Q Consensus 94 ~~w~~~~~~c~~---w~gv~C~~~----------------~~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~ 154 (682)
.+|.+..+||.. |.++.|+.. -..+..++++++.+. .+|+..++++++|++|+|++|.|+
T Consensus 10 ~~~~~~~~C~~~~~~~~c~~~~~~i~~~~~~~~~~~~~l~l~~l~~l~l~~~~l~-~lp~~~~~~l~~L~~L~L~~n~l~ 88 (597)
T 3oja_B 10 KPRQPEYKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIE 88 (597)
T ss_dssp -CCCSEECCCCC--CCSEEECSCEECSSCCCCEESCSSGGGCCCSEEEESSCEES-EECTHHHHHCCCCSEEECTTSCCC
T ss_pred cCCCCCCcCcccCcCceeEecCceecccccccccCcccccCCCceEEEeeCCCCC-CcCHHHHccCCCCcEEECCCCCCC
Confidence 368877676654 665555410 024567888888887 678777899999999999999999
Q ss_pred CCCCCcCCCCCCCcEEeecccccCCcCCCCcc--cccceeecccccCcccCCcchhhhccccceeccCCcccCCCCCC--
Q 005693 155 GGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF-- 230 (682)
Q Consensus 155 g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~--~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~-- 230 (682)
+..|..|+++++|++|+|++|.+++..|..|. ++|++|+|++|+|++..+..|+++++|+.|+|++|.+++.+|..
T Consensus 89 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 168 (597)
T 3oja_B 89 EIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQ 168 (597)
T ss_dssp EECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTT
T ss_pred CCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhh
Confidence 88888999999999999999999988887776 89999999999999766667899999999999999999988863
Q ss_pred CCCCCCeEEecccCCCCCCCccccCCCCCCCCCC
Q 005693 231 DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFVGN 264 (682)
Q Consensus 231 ~l~~L~~l~ls~N~l~g~~p~~~~~l~~l~~~~n 264 (682)
.+++|+.|+|++|.+++..+..+.++..|.+.+|
T Consensus 169 ~l~~L~~L~L~~N~l~~~~~~~l~~L~~L~l~~n 202 (597)
T 3oja_B 169 ATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYN 202 (597)
T ss_dssp TCTTCCEEECTTSCCSBCCGGGCTTCSEEECCSS
T ss_pred cCCcCcEEECcCCCCCCcChhhhhhhhhhhcccC
Confidence 8999999999999999765555555555544444
No 287
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.67 E-value=6.5e-17 Score=174.19 Aligned_cols=169 Identities=20% Similarity=0.187 Sum_probs=131.9
Q ss_pred CCCCCCCCCCCcceEEecCCC-------------------CeEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCC
Q 005693 95 NWSSTNPICQSWVGINCTQDR-------------------TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTG 155 (682)
Q Consensus 95 ~w~~~~~~c~~w~gv~C~~~~-------------------~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g 155 (682)
+|....+||+.|.+..|.... ..+..++++++.+. .+|+..+..+++|++|+|++|++++
T Consensus 5 ~~~~~~~C~~~~~~~~c~~~~~~i~~~~~~~~~~~~~~~l~~l~~l~l~~~~l~-~l~~~~~~~l~~L~~L~L~~n~i~~ 83 (390)
T 3o6n_A 5 PRQPEYKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIEE 83 (390)
T ss_dssp --CCEECBCC------EEEESCEECSSCCCCEESCSSGGGCCCSEEEEESCEES-EECTHHHHHCCCCSEEECTTSCCCE
T ss_pred CCCCccceehhhhhhccceeeeeeecccccccccccccccCCceEEEecCCchh-hCChhHhcccccCcEEECCCCcccc
Confidence 688777777665555553110 35677899999887 6888678999999999999999998
Q ss_pred CCCCcCCCCCCCcEEeecccccCCcCCCCcc--cccceeecccccCcccCCcchhhhccccceeccCCcccCCCCCC--C
Q 005693 156 GLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--D 231 (682)
Q Consensus 156 ~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~--~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~ 231 (682)
..|..|.++++|++|+|++|++++..|..+. ++|++|+|++|+++...+..|+++++|+.|+|++|++++..|.. .
T Consensus 84 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 163 (390)
T 3o6n_A 84 IDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQA 163 (390)
T ss_dssp ECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSS
T ss_pred cChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccC
Confidence 7788999999999999999999988787776 79999999999999655556799999999999999999887763 8
Q ss_pred CCCCCeEEecccCCCCCCCccccCCCCCCCCCC
Q 005693 232 IPKLRHLNLSYNGLKGSIPSSLQKFPNSSFVGN 264 (682)
Q Consensus 232 l~~L~~l~ls~N~l~g~~p~~~~~l~~l~~~~n 264 (682)
+++|+.|++++|++++.-...+.++..+.+.+|
T Consensus 164 l~~L~~L~l~~n~l~~~~~~~l~~L~~L~l~~n 196 (390)
T 3o6n_A 164 TTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYN 196 (390)
T ss_dssp CTTCCEEECCSSCCSBCCGGGCTTCSEEECCSS
T ss_pred CCCCCEEECCCCcCCccccccccccceeecccc
Confidence 899999999999999754444445544444443
No 288
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.67 E-value=1.1e-16 Score=177.06 Aligned_cols=158 Identities=22% Similarity=0.207 Sum_probs=137.0
Q ss_pred CcceEEecCCC---------CeEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeeccc
Q 005693 105 SWVGINCTQDR---------TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHN 175 (682)
Q Consensus 105 ~w~gv~C~~~~---------~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N 175 (682)
.|..|.|.... ..+..|+|++|++++..|. .|.++++|++|+|++|.+++..|..|.++++|++|+|++|
T Consensus 12 ~~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~~-~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 90 (477)
T 2id5_A 12 QDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQD-EFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSN 90 (477)
T ss_dssp TTTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECTT-TTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECHh-HccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCC
Confidence 57889997532 3678999999999965554 8999999999999999999888999999999999999999
Q ss_pred ccCCcCCCCcc--cccceeecccccCcccCCcchhhhccccceeccCCcccCCCCCC--CCCCCCeEEecccCCCCCCCc
Q 005693 176 NFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPS 251 (682)
Q Consensus 176 ~l~g~~p~~~~--~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~l~~L~~l~ls~N~l~g~~p~ 251 (682)
++++..+..|. ++|++|+|++|++++..|..|.++++|+.|+|++|++++..|.. .+++|+.|+|++|++++..+.
T Consensus 91 ~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 170 (477)
T 2id5_A 91 RLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTE 170 (477)
T ss_dssp CCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHH
T ss_pred cCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChh
Confidence 99965555565 89999999999999999999999999999999999999877754 889999999999999976666
Q ss_pred cccCCCCCCCCC
Q 005693 252 SLQKFPNSSFVG 263 (682)
Q Consensus 252 ~~~~l~~l~~~~ 263 (682)
.+.++++|..++
T Consensus 171 ~l~~l~~L~~L~ 182 (477)
T 2id5_A 171 ALSHLHGLIVLR 182 (477)
T ss_dssp HHTTCTTCCEEE
T ss_pred HhcccCCCcEEe
Confidence 677777776553
No 289
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.67 E-value=7.8e-17 Score=177.09 Aligned_cols=151 Identities=23% Similarity=0.314 Sum_probs=133.0
Q ss_pred Ccce--EEecCCC--------CeEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCC-CcCCCCCCCcEEeec
Q 005693 105 SWVG--INCTQDR--------TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLP-SEITSLPSLRYLYLQ 173 (682)
Q Consensus 105 ~w~g--v~C~~~~--------~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p-~~~~~l~~L~~L~L~ 173 (682)
.|.+ |.|+... .+++.|+|++|++++..|. .|+++++|++|+|++|.+.+.+| ..|.++++|++|+|+
T Consensus 9 ~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~-~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls 87 (455)
T 3v47_A 9 SVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNET-SFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLD 87 (455)
T ss_dssp EEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECTT-TTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECT
T ss_pred EEEccccCcCCCCcccCCCCCCccCEEEecCCccCcCChh-HhccCccccEEECcCCcccceECcccccccccCCEEeCC
Confidence 4554 8887643 4689999999999976665 79999999999999999987774 679999999999999
Q ss_pred ccccCCcCCCCcc--cccceeecccccCcccCCcc--hhhhccccceeccCCcccCCCCCC---CCCCCCeEEecccCCC
Q 005693 174 HNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQS--IQNLTQLTGLSLQSNNLSGSIPNF---DIPKLRHLNLSYNGLK 246 (682)
Q Consensus 174 ~N~l~g~~p~~~~--~~L~~L~ls~N~l~g~~p~~--~~~l~~L~~L~l~~N~l~g~~p~~---~l~~L~~l~ls~N~l~ 246 (682)
+|++++..|..|. ++|++|+|++|++++.+|.. |+++++|+.|+|++|++++..|.. .+++|+.|+|++|+++
T Consensus 88 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~ 167 (455)
T 3v47_A 88 YNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVK 167 (455)
T ss_dssp TCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBS
T ss_pred CCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCccc
Confidence 9999988898887 89999999999999876665 999999999999999999988862 8999999999999999
Q ss_pred CCCCccccCC
Q 005693 247 GSIPSSLQKF 256 (682)
Q Consensus 247 g~~p~~~~~l 256 (682)
+..|..+.++
T Consensus 168 ~~~~~~l~~l 177 (455)
T 3v47_A 168 SICEEDLLNF 177 (455)
T ss_dssp CCCTTTSGGG
T ss_pred ccChhhhhcc
Confidence 9888888765
No 290
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.67 E-value=2.9e-16 Score=160.51 Aligned_cols=134 Identities=30% Similarity=0.353 Sum_probs=120.6
Q ss_pred CeEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecccccCCcCCCCcc--cccceee
Q 005693 116 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLD 193 (682)
Q Consensus 116 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~--~~L~~L~ 193 (682)
.++..|+|++|++++ +++..++++++|++|+|++|++++..|..|.++++|++|+|++|++++..|..+. ++|++|+
T Consensus 85 ~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 163 (272)
T 3rfs_A 85 TNLTYLILTGNQLQS-LPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELD 163 (272)
T ss_dssp TTCCEEECTTSCCCC-CCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCccCc-cChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEE
Confidence 578999999999995 5554789999999999999999988888899999999999999999977776665 8999999
Q ss_pred cccccCcccCCcchhhhccccceeccCCcccCCCCCC--CCCCCCeEEecccCCCCCCC
Q 005693 194 LSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIP 250 (682)
Q Consensus 194 ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~l~~L~~l~ls~N~l~g~~p 250 (682)
|++|+|++..|..|+++++|+.|+|++|++++.+|.. .+++|+.|+|++|.+.+..|
T Consensus 164 l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 222 (272)
T 3rfs_A 164 LSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 222 (272)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccccCc
Confidence 9999999888888999999999999999999988764 89999999999999987655
No 291
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.66 E-value=1.8e-16 Score=163.58 Aligned_cols=149 Identities=28% Similarity=0.308 Sum_probs=106.2
Q ss_pred CeEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecccccCCcCCCCcc--cccceee
Q 005693 116 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLD 193 (682)
Q Consensus 116 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~--~~L~~L~ 193 (682)
.++..|+|++|++++ ++. .+.+++|++|+|++|+|+ .+|..+.++++|++|+|++|+|++..|..|. ++|++|+
T Consensus 55 ~~L~~L~L~~n~l~~-~~~--~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~ 130 (290)
T 1p9a_G 55 TRLTQLNLDRAELTK-LQV--DGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELY 130 (290)
T ss_dssp TTCCEEECTTSCCCE-EEC--CSCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEE
T ss_pred CCCCEEECCCCccCc-ccC--CCCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEE
Confidence 467778888887774 443 367778888888888887 6777777788888888888888766556665 6788888
Q ss_pred cccccCcccCCcchhhhccccceeccCCcccCCCCCC--CCCCCCeEEecccCCCCCCCccccCCCCC---CCCCCCCCC
Q 005693 194 LSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNS---SFVGNSLLC 268 (682)
Q Consensus 194 ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~l~~L~~l~ls~N~l~g~~p~~~~~l~~l---~~~~n~~~~ 268 (682)
|++|+|++..+..|..+++|+.|+|++|+|++..+.. .+++|+.|+|++|+|+ .+|..+..+.+| .+.+|++.|
T Consensus 131 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C 209 (290)
T 1p9a_G 131 LKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLC 209 (290)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCC
T ss_pred CCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccC
Confidence 8888888766667777888888888888887555443 5778888888888887 566665554443 344566655
Q ss_pred C
Q 005693 269 G 269 (682)
Q Consensus 269 ~ 269 (682)
.
T Consensus 210 ~ 210 (290)
T 1p9a_G 210 N 210 (290)
T ss_dssp S
T ss_pred c
Confidence 3
No 292
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.66 E-value=9.5e-17 Score=166.85 Aligned_cols=140 Identities=23% Similarity=0.227 Sum_probs=69.4
Q ss_pred eEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecccccCC-cCCCCcc--cccceee
Q 005693 117 RVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSG-KIPSSFS--PQLVVLD 193 (682)
Q Consensus 117 ~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g-~~p~~~~--~~L~~L~ 193 (682)
++..|++++|++++..+...+..+++|++|+|++|.+++..|..+.++++|++|+|++|++++ .+|..+. ++|++|+
T Consensus 102 ~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ 181 (306)
T 2z66_A 102 QLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLD 181 (306)
T ss_dssp TCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEE
T ss_pred CCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEE
Confidence 344455555555432221245555555555555555554445555555555555555555544 3444443 4555555
Q ss_pred cccccCcccCCcchhhhccccceeccCCcccCCCCCC--CCCCCCeEEecccCCCCCCCccccCC
Q 005693 194 LSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKF 256 (682)
Q Consensus 194 ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~l~~L~~l~ls~N~l~g~~p~~~~~l 256 (682)
|++|++++..|..|.++++|+.|+|++|++++..+.. .+++|+.|+|++|++++..|..+..+
T Consensus 182 Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~ 246 (306)
T 2z66_A 182 LSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHF 246 (306)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCC
T ss_pred CCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhh
Confidence 5555555544555555555555555555555433321 44555555555555555555444443
No 293
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.66 E-value=1.9e-16 Score=174.13 Aligned_cols=157 Identities=21% Similarity=0.167 Sum_probs=114.0
Q ss_pred CcceEEecCCC---------CeEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeeccc
Q 005693 105 SWVGINCTQDR---------TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHN 175 (682)
Q Consensus 105 ~w~gv~C~~~~---------~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N 175 (682)
.|..|.|.+.. .+++.|+|++|++++..|. .|+++++|+.|+|++|+|++..|..|.++++|++|+|++|
T Consensus 55 ~~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~-~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n 133 (452)
T 3zyi_A 55 QFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQAD-TFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDN 133 (452)
T ss_dssp SSCEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECTT-TTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CCcEEEECCCCcCccCCCCCCCccEEECcCCcCceECHH-HcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCC
Confidence 46788887532 3688999999999965555 8999999999999999999888899999999999999999
Q ss_pred ccCCcCCCCcc--cccceeecccccCcccCCcchhhhccc-------------------------cceeccCCcccCCCC
Q 005693 176 NFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQL-------------------------TGLSLQSNNLSGSIP 228 (682)
Q Consensus 176 ~l~g~~p~~~~--~~L~~L~ls~N~l~g~~p~~~~~l~~L-------------------------~~L~l~~N~l~g~~p 228 (682)
+|++..+..|. ++|++|+|++|+|++..+..|.++++| +.|+|++|++++...
T Consensus 134 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~ 213 (452)
T 3zyi_A 134 WLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDMPN 213 (452)
T ss_dssp CCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSCCC
T ss_pred cCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccccc
Confidence 99966666565 789999999999886655555555444 444555555543221
Q ss_pred CCCCCCCCeEEecccCCCCCCCccccCCCCCCCC
Q 005693 229 NFDIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFV 262 (682)
Q Consensus 229 ~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~l~~~ 262 (682)
-..+++|+.|+|++|++++..|..|.++++|+.+
T Consensus 214 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 247 (452)
T 3zyi_A 214 LTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKL 247 (452)
T ss_dssp CTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEE
T ss_pred ccccccccEEECcCCcCcccCcccccCccCCCEE
Confidence 1255566666666666665556666555555443
No 294
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.66 E-value=3.1e-16 Score=149.28 Aligned_cols=130 Identities=26% Similarity=0.303 Sum_probs=109.6
Q ss_pred CcceEEecCCCCeEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecccccCCcCCCC
Q 005693 105 SWVGINCTQDRTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSS 184 (682)
Q Consensus 105 ~w~gv~C~~~~~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~ 184 (682)
+|.++.|+. ++++ .+|.. ..++|++|+|++|++++..+..|.++++|++|+|++|++++..+..
T Consensus 8 ~~~~l~~~~------------~~l~-~~p~~---~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 71 (177)
T 2o6r_A 8 SGTEIRCNS------------KGLT-SVPTG---IPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGV 71 (177)
T ss_dssp ETTEEECCS------------SCCS-SCCTT---CCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTT
T ss_pred CCCEEEecC------------CCCc-cCCCC---CCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhH
Confidence 677777654 4555 56652 2478999999999999777777899999999999999999766665
Q ss_pred cc--cccceeecccccCcccCCcchhhhccccceeccCCcccCCCCCC--CCCCCCeEEecccCCCCCCC
Q 005693 185 FS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIP 250 (682)
Q Consensus 185 ~~--~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~l~~L~~l~ls~N~l~g~~p 250 (682)
|. ++|++|+|++|+|++..+..+.++++|+.|+|++|+|++.++.. .+++|+.|+|++|.+++..|
T Consensus 72 ~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 72 FDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp TTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred ccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 55 79999999999999888888999999999999999999766653 68999999999999997665
No 295
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.66 E-value=1.6e-16 Score=162.70 Aligned_cols=143 Identities=21% Similarity=0.200 Sum_probs=123.5
Q ss_pred eEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecccccCCcCCCCcc--cccceeec
Q 005693 117 RVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDL 194 (682)
Q Consensus 117 ~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~--~~L~~L~l 194 (682)
.++.|+|++|++++. ++..|+++++|++|+|++|++++..+..|.++++|++|+|++|++++..|..+. ++|++|++
T Consensus 29 ~l~~L~ls~n~l~~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 29 STKNLDLSFNPLRHL-GSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TCCEEECTTCCCCEE-CTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CccEEECCCCccccc-CHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 588999999999854 444799999999999999999977777899999999999999999987777776 79999999
Q ss_pred ccccCcccCCcchhhhccccceeccCCcccCC-CCCC--CCCCCCeEEecccCCCCCCCccccCCCCCC
Q 005693 195 SFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGS-IPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSS 260 (682)
Q Consensus 195 s~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~-~p~~--~l~~L~~l~ls~N~l~g~~p~~~~~l~~l~ 260 (682)
++|++++..+..++++++|+.|+|++|++++. +|.. .+++|+.|+|++|++++..+..+..+.++.
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 176 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMP 176 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCT
T ss_pred CCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhcc
Confidence 99999988777899999999999999999873 4653 889999999999999987777776555444
No 296
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.66 E-value=3.6e-16 Score=159.95 Aligned_cols=152 Identities=24% Similarity=0.262 Sum_probs=89.7
Q ss_pred eEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecccccCC-cCCCCcc--cccceee
Q 005693 117 RVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSG-KIPSSFS--PQLVVLD 193 (682)
Q Consensus 117 ~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g-~~p~~~~--~~L~~L~ 193 (682)
++..|+|++|.+++..+. .+.++++|++|+|++|++++..+..+.++++|++|+|++|++++ .+|..+. ++|++|+
T Consensus 77 ~L~~L~L~~n~l~~~~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~ 155 (276)
T 2z62_A 77 HLSTLILTGNPIQSLALG-AFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLD 155 (276)
T ss_dssp TCCEEECTTCCCCEECTT-TTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEE
T ss_pred CCCEEECCCCccCccChh-hhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEE
Confidence 455566666665543332 45666666666666666665444456666666666666666654 2455554 5566666
Q ss_pred cccccCcccCCcchhhhcccc----ceeccCCcccCCCCCC-CCCCCCeEEecccCCCCCCCccccCCCCCC---CCCCC
Q 005693 194 LSFNSFTGNIPQSIQNLTQLT----GLSLQSNNLSGSIPNF-DIPKLRHLNLSYNGLKGSIPSSLQKFPNSS---FVGNS 265 (682)
Q Consensus 194 ls~N~l~g~~p~~~~~l~~L~----~L~l~~N~l~g~~p~~-~l~~L~~l~ls~N~l~g~~p~~~~~l~~l~---~~~n~ 265 (682)
|++|++++..+..+..+++|+ .|++++|++++..+.. ...+|+.|+|++|++++..+..+.++++|+ +.+|+
T Consensus 156 Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~ 235 (276)
T 2z62_A 156 LSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNP 235 (276)
T ss_dssp CCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCSCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSC
T ss_pred CCCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCccccCCCcccEEECCCCceeecCHhHhcccccccEEEccCCc
Confidence 666666655555666665555 5566666666544443 445788888888888865555556555544 44566
Q ss_pred CCCC
Q 005693 266 LLCG 269 (682)
Q Consensus 266 ~~~~ 269 (682)
..|.
T Consensus 236 ~~c~ 239 (276)
T 2z62_A 236 WDCS 239 (276)
T ss_dssp BCCC
T ss_pred cccc
Confidence 5554
No 297
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.65 E-value=1.3e-16 Score=181.89 Aligned_cols=152 Identities=20% Similarity=0.229 Sum_probs=133.1
Q ss_pred ceEEecCC---------CCeEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeeccccc
Q 005693 107 VGINCTQD---------RTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNF 177 (682)
Q Consensus 107 ~gv~C~~~---------~~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l 177 (682)
..|.|++. ..+++.|+|++|++++..+. .|+++++|++|+|++|++++..|..|.++++|++|+|++|++
T Consensus 14 ~~~~c~~~~l~~ip~~~~~~l~~L~Ls~n~l~~~~~~-~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l 92 (606)
T 3vq2_A 14 ITYQCMDQKLSKVPDDIPSSTKNIDLSFNPLKILKSY-SFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPI 92 (606)
T ss_dssp TEEECTTSCCSSCCTTSCTTCCEEECTTSCCCEECTT-TTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred CceEccCCCcccCCCCCCCCcCEEECCCCCcCEeChh-hccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcc
Confidence 36777652 24689999999999965554 799999999999999999988899999999999999999999
Q ss_pred CCcCCCCcc--cccceeecccccCcccCCcchhhhccccceeccCCcccC-CCCCC--CCCCCCeEEecccCCCCCCCcc
Q 005693 178 SGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSG-SIPNF--DIPKLRHLNLSYNGLKGSIPSS 252 (682)
Q Consensus 178 ~g~~p~~~~--~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g-~~p~~--~l~~L~~l~ls~N~l~g~~p~~ 252 (682)
++..|..|. ++|++|+|++|++++..|..|+++++|++|+|++|++++ .+|.. .+++|++|+|++|++++..|..
T Consensus 93 ~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~ 172 (606)
T 3vq2_A 93 QSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVND 172 (606)
T ss_dssp CCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTT
T ss_pred cccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhh
Confidence 988899887 899999999999998888999999999999999999986 56764 8999999999999999888887
Q ss_pred ccCCCCC
Q 005693 253 LQKFPNS 259 (682)
Q Consensus 253 ~~~l~~l 259 (682)
++.+.+|
T Consensus 173 ~~~l~~L 179 (606)
T 3vq2_A 173 LQFLREN 179 (606)
T ss_dssp THHHHHC
T ss_pred hhhhhcc
Confidence 7665543
No 298
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.65 E-value=4.2e-16 Score=163.99 Aligned_cols=157 Identities=21% Similarity=0.267 Sum_probs=127.7
Q ss_pred CCcceEEecCCC---------CeEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecc
Q 005693 104 QSWVGINCTQDR---------TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQH 174 (682)
Q Consensus 104 ~~w~gv~C~~~~---------~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~ 174 (682)
|.|..+.|+... .+++.|+|++|++.+..| ..|+++++|++|+|++|++++..|..|.++++|++|+|++
T Consensus 33 c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 111 (332)
T 2ft3_A 33 CHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRK-DDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISK 111 (332)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCEECT-TTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCS
T ss_pred ccCCEEECCCCCccccCCCCCCCCeEEECCCCcCCccCH-hHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCC
Confidence 479999997532 368899999999985444 4799999999999999999988899999999999999999
Q ss_pred cccCCcCCCCcccccceeecccccCcccCCcchhhhccccceeccCCcccC--CCCCC--CCCCCCeEEecccCCCCCCC
Q 005693 175 NNFSGKIPSSFSPQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSG--SIPNF--DIPKLRHLNLSYNGLKGSIP 250 (682)
Q Consensus 175 N~l~g~~p~~~~~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g--~~p~~--~l~~L~~l~ls~N~l~g~~p 250 (682)
|+++ .+|..+.++|++|+|++|++++..+..|.++++|+.|+|++|+++. ..|.. .+ +|+.|++++|++++ +|
T Consensus 112 n~l~-~l~~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~ 188 (332)
T 2ft3_A 112 NHLV-EIPPNLPSSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IP 188 (332)
T ss_dssp SCCC-SCCSSCCTTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CC
T ss_pred CcCC-ccCccccccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-cC
Confidence 9999 7888877999999999999998777789999999999999999963 44443 34 77777777777774 44
Q ss_pred ccc-cCCCCCCCCCC
Q 005693 251 SSL-QKFPNSSFVGN 264 (682)
Q Consensus 251 ~~~-~~l~~l~~~~n 264 (682)
..+ .++..|.+.+|
T Consensus 189 ~~~~~~L~~L~l~~n 203 (332)
T 2ft3_A 189 KDLPETLNELHLDHN 203 (332)
T ss_dssp SSSCSSCSCCBCCSS
T ss_pred ccccCCCCEEECCCC
Confidence 433 34445544444
No 299
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.65 E-value=4.2e-17 Score=187.09 Aligned_cols=133 Identities=17% Similarity=0.313 Sum_probs=118.5
Q ss_pred cccccCCccccCCCCCCcEEEccCCCCCCC-----------------CCCcCC--CCCCCcEEeecccccCCcCCCCcc-
Q 005693 127 GLVGPIPNNTLGKLDALEVLSLRSNVLTGG-----------------LPSEIT--SLPSLRYLYLQHNNFSGKIPSSFS- 186 (682)
Q Consensus 127 ~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~-----------------~p~~~~--~l~~L~~L~L~~N~l~g~~p~~~~- 186 (682)
+++| ||+ .++++++|++|+|++|+|+|. +|+.++ ++++|++|+|++|++.|.+|..+.
T Consensus 194 ~l~~-ip~-~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~ 271 (636)
T 4eco_A 194 NITF-VSK-AVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKA 271 (636)
T ss_dssp EEEE-ECG-GGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTT
T ss_pred CCcc-CCH-HHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhc
Confidence 4556 887 699999999999999999986 999999 999999999999999999999887
Q ss_pred -cccceeeccccc-Ccc-cCCcchhhh------ccccceeccCCcccCCCCC--C--CCCCCCeEEecccCCCCCCCccc
Q 005693 187 -PQLVVLDLSFNS-FTG-NIPQSIQNL------TQLTGLSLQSNNLSGSIPN--F--DIPKLRHLNLSYNGLKGSIPSSL 253 (682)
Q Consensus 187 -~~L~~L~ls~N~-l~g-~~p~~~~~l------~~L~~L~l~~N~l~g~~p~--~--~l~~L~~l~ls~N~l~g~~p~~~ 253 (682)
++|++|+|++|+ |+| .+|..++++ ++|+.|+|++|+++ .+|. . .+++|+.|+|++|+++|.+| .+
T Consensus 272 l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~ 349 (636)
T 4eco_A 272 LPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AF 349 (636)
T ss_dssp CSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CC
T ss_pred CCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hh
Confidence 799999999998 999 899999987 99999999999999 7776 3 89999999999999999999 77
Q ss_pred cCCCCCCCCC
Q 005693 254 QKFPNSSFVG 263 (682)
Q Consensus 254 ~~l~~l~~~~ 263 (682)
+++++|+.++
T Consensus 350 ~~l~~L~~L~ 359 (636)
T 4eco_A 350 GSEIKLASLN 359 (636)
T ss_dssp EEEEEESEEE
T ss_pred CCCCCCCEEE
Confidence 7776665543
No 300
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.65 E-value=1.8e-16 Score=174.17 Aligned_cols=130 Identities=22% Similarity=0.254 Sum_probs=114.7
Q ss_pred CCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecccccCCcCCCCcc--cccceeecccccCcccCCcchhhhccccceec
Q 005693 141 DALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSL 218 (682)
Q Consensus 141 ~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~--~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 218 (682)
++|+.|+|++|++++.+|..|.++++|++|+|++|++++..|..|. ++|++|+|++|++++..|..|+++++|+.|+|
T Consensus 275 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 354 (455)
T 3v47_A 275 SGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDL 354 (455)
T ss_dssp SCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEEC
T ss_pred cCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEEC
Confidence 6899999999999999999999999999999999999988888886 79999999999999988999999999999999
Q ss_pred cCCcccCCCCCC--CCCCCCeEEecccCCCCCCCccccCCCCCC---CCCCCCCCCC
Q 005693 219 QSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSS---FVGNSLLCGP 270 (682)
Q Consensus 219 ~~N~l~g~~p~~--~l~~L~~l~ls~N~l~g~~p~~~~~l~~l~---~~~n~~~~~~ 270 (682)
++|++++..|.. .+++|++|+|++|++++..+..+..+++|+ +.+|+..|.+
T Consensus 355 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 411 (455)
T 3v47_A 355 SYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 411 (455)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCT
T ss_pred CCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCC
Confidence 999999887864 899999999999999976666667666655 4566665543
No 301
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.65 E-value=2.1e-16 Score=180.32 Aligned_cols=154 Identities=19% Similarity=0.108 Sum_probs=137.5
Q ss_pred cceEEecCCC---------CeEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecccc
Q 005693 106 WVGINCTQDR---------TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNN 176 (682)
Q Consensus 106 w~gv~C~~~~---------~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~ 176 (682)
+..|.|.+.. ..++.|+|++|++++..|. .|+++++|++|+|++|++++..|..|.++++|++|+|++|+
T Consensus 14 ~~~~~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~~~~~-~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~ 92 (606)
T 3t6q_A 14 NKTYNCENLGLNEIPGTLPNSTECLEFSFNVLPTIQNT-TFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANP 92 (606)
T ss_dssp TTEEECTTSCCSSCCTTSCTTCCEEECTTCCCSEECTT-TSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred CceEECCCCCcccCcCCCCCcCcEEEccCCccCcCChh-HhccCccceEEECCCCccceeChhhccCccccCeeeCCCCc
Confidence 5678887532 4689999999999965555 89999999999999999999889999999999999999999
Q ss_pred cCCcCCCCcc--cccceeecccccCcccCCcchhhhccccceeccCCcccCC-CCCC-CCCCCCeEEecccCCCCCCCcc
Q 005693 177 FSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGS-IPNF-DIPKLRHLNLSYNGLKGSIPSS 252 (682)
Q Consensus 177 l~g~~p~~~~--~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~-~p~~-~l~~L~~l~ls~N~l~g~~p~~ 252 (682)
+++..|..|. ++|++|+|++|++++..|..++++++|++|+|++|++++. +|.. .+++|+.|+|++|++++..|..
T Consensus 93 l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 172 (606)
T 3t6q_A 93 LIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKED 172 (606)
T ss_dssp CSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHH
T ss_pred ccccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhh
Confidence 9998898887 8999999999999988789999999999999999999984 4554 8999999999999999888888
Q ss_pred ccCCCCCC
Q 005693 253 LQKFPNSS 260 (682)
Q Consensus 253 ~~~l~~l~ 260 (682)
++.+++|.
T Consensus 173 ~~~l~~L~ 180 (606)
T 3t6q_A 173 MSSLQQAT 180 (606)
T ss_dssp HHTTTTCC
T ss_pred hhhhcccc
Confidence 88888776
No 302
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.64 E-value=8.3e-17 Score=186.79 Aligned_cols=178 Identities=20% Similarity=0.281 Sum_probs=113.3
Q ss_pred CChhHHHHHHHHHHhCCC---CCCcCCCCCCCCCCCcceEEecCCCCeEEEEEeC------------------CCcccc-
Q 005693 73 DLNSDRQALLDFADAVPH---LRKLNWSSTNPICQSWVGINCTQDRTRVFGLRLP------------------GIGLVG- 130 (682)
Q Consensus 73 ~~~~~~~al~~~~~~~~~---~~~~~w~~~~~~c~~w~gv~C~~~~~~v~~l~l~------------------~~~l~g- 130 (682)
..+.++.+|.++..+... .....|......+.+|.++.++. .+++.|+|. ++.+.+
T Consensus 129 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~--~~~~~l~L~~n~~~~~~~~~l~~l~Ls~~~i~~~ 206 (727)
T 4b8c_D 129 LVDCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTATNSAVST--PLTPKIELFANGKDEANQALLQHKKLSQYSIDED 206 (727)
T ss_dssp ---CCCHHHHHHHHHHHHHHTTC---------------------------------------------------------
T ss_pred ccccchhhhhhhhhhcccccCcccCCCcCCCCccccCCCceecC--CccceEEeeCCCCCcchhhHhhcCccCcccccCc
Confidence 345678899999877621 22235755555555898887765 344444443 333322
Q ss_pred -------cCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecccccCCcCCCCcc--cccceeecccccCcc
Q 005693 131 -------PIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTG 201 (682)
Q Consensus 131 -------~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~--~~L~~L~ls~N~l~g 201 (682)
.++++.+..+..|+.|+|++|.+. .+|..+.++++|++|+|++|+|+ .+|..|. ++|++|+|++|+|+
T Consensus 207 ~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~- 283 (727)
T 4b8c_D 207 DDIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT- 283 (727)
T ss_dssp ---------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-
T ss_pred cccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-
Confidence 234457888999999999999998 88888889999999999999999 8888876 78999999999999
Q ss_pred cCCcchhhhccccceeccCCcccCCCCC-C-CCCCCCeEEecccCCCCCCCccccCC
Q 005693 202 NIPQSIQNLTQLTGLSLQSNNLSGSIPN-F-DIPKLRHLNLSYNGLKGSIPSSLQKF 256 (682)
Q Consensus 202 ~~p~~~~~l~~L~~L~l~~N~l~g~~p~-~-~l~~L~~l~ls~N~l~g~~p~~~~~l 256 (682)
.+|..|++|++|++|+|++|.|+ .+|. + .+++|+.|+|++|.|+|.+|..+..+
T Consensus 284 ~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~ 339 (727)
T 4b8c_D 284 SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEK 339 (727)
T ss_dssp SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHH
T ss_pred ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhc
Confidence 78999999999999999999998 5565 3 88999999999999999888777543
No 303
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.64 E-value=6.1e-16 Score=162.62 Aligned_cols=141 Identities=20% Similarity=0.253 Sum_probs=116.5
Q ss_pred CCcceEEecCCC---------CeEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecc
Q 005693 104 QSWVGINCTQDR---------TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQH 174 (682)
Q Consensus 104 ~~w~gv~C~~~~---------~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~ 174 (682)
|.|..+.|+... ..++.|+|++|++++ +++..|+++++|++|+|++|++++..|..|.++++|++|+|++
T Consensus 31 c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 109 (330)
T 1xku_A 31 CHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITE-IKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSK 109 (330)
T ss_dssp EETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCC-BCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CCCeEEEecCCCccccCccCCCCCeEEECCCCcCCE-eChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCC
Confidence 479999998522 367889999999995 5554799999999999999999988899999999999999999
Q ss_pred cccCCcCCCCcccccceeecccccCcccCCcchhhhccccceeccCCcccC--CCCCC--CCCCCCeEEecccCCC
Q 005693 175 NNFSGKIPSSFSPQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSG--SIPNF--DIPKLRHLNLSYNGLK 246 (682)
Q Consensus 175 N~l~g~~p~~~~~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g--~~p~~--~l~~L~~l~ls~N~l~ 246 (682)
|+++ .+|..+.++|++|++++|++++..+..|.++++|+.|+|++|+++. ..+.. .+++|+.|++++|+++
T Consensus 110 n~l~-~l~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~ 184 (330)
T 1xku_A 110 NQLK-ELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT 184 (330)
T ss_dssp SCCS-BCCSSCCTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC
T ss_pred CcCC-ccChhhcccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc
Confidence 9999 7888877889999999999987777778888888888888888853 33432 5666777777776666
No 304
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.64 E-value=2.1e-16 Score=149.07 Aligned_cols=132 Identities=25% Similarity=0.229 Sum_probs=106.2
Q ss_pred CeEEEEEeCCCccc-ccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecccccCCcCCCCcc--ccccee
Q 005693 116 TRVFGLRLPGIGLV-GPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVL 192 (682)
Q Consensus 116 ~~v~~l~l~~~~l~-g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~--~~L~~L 192 (682)
.+++.|+|++|+++ |.+|. .+..+++|++|+|++|.+++. ..+..+++|++|+|++|++++.+|..+. ++|++|
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~-~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEG-LTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSS-CCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred ccCCEEECCCCCCChhhHHH-HHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 46788888888887 78887 578888999999999988865 6788888999999999998877776654 788899
Q ss_pred ecccccCcccC-CcchhhhccccceeccCCcccCCCC----C-CCCCCCCeEEecccCCCCCCCc
Q 005693 193 DLSFNSFTGNI-PQSIQNLTQLTGLSLQSNNLSGSIP----N-FDIPKLRHLNLSYNGLKGSIPS 251 (682)
Q Consensus 193 ~ls~N~l~g~~-p~~~~~l~~L~~L~l~~N~l~g~~p----~-~~l~~L~~l~ls~N~l~g~~p~ 251 (682)
+|++|+|++.. +..+..+++|+.|+|++|++++..+ . ..+++|+.|++++|.+. .+|+
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~-~~~~ 164 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ-EAPD 164 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC-BCCS
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh-hccc
Confidence 99999888642 2788888889999999998887665 2 27888888998888887 4443
No 305
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.64 E-value=3.6e-16 Score=185.23 Aligned_cols=86 Identities=30% Similarity=0.334 Sum_probs=63.6
Q ss_pred cccceeecccccCcccCCcchhhhccccceeccCCcccCCCCCCCCCCCCeEEecccCCCCCCCccccCCCCCCCCCCCC
Q 005693 187 PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFVGNSL 266 (682)
Q Consensus 187 ~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~l~~~~n~~ 266 (682)
++|++|+|++|+|++..|..|.++++|+.|+|++|+|++.+|....++|+.|+|++|+|++..|..+.++..+.+.+|++
T Consensus 480 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~L~~l~l~~Np~ 559 (844)
T 3j0a_A 480 SHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLPANLEILDISRNQLLAPNPDVFVSLSVLDITHNKF 559 (844)
T ss_dssp CCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCCSCCCEEEEEEECCCCCCSCCCSSCCEEEEEEECC
T ss_pred ccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhhccccEEECCCCcCCCCChhHhCCcCEEEecCCCc
Confidence 35566666666666666666777777777777777777665554447788888888888888888888888888889999
Q ss_pred CCCCCC
Q 005693 267 LCGPPL 272 (682)
Q Consensus 267 ~~~~~l 272 (682)
.|.++.
T Consensus 560 ~C~c~~ 565 (844)
T 3j0a_A 560 ICECEL 565 (844)
T ss_dssp CCSSSC
T ss_pred cccccc
Confidence 986653
No 306
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.64 E-value=2.3e-16 Score=179.92 Aligned_cols=142 Identities=25% Similarity=0.214 Sum_probs=72.1
Q ss_pred eEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCC-CcCCCCCCCcEEeecccccCCcCCCCcc--cccceee
Q 005693 117 RVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLP-SEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLD 193 (682)
Q Consensus 117 ~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p-~~~~~l~~L~~L~L~~N~l~g~~p~~~~--~~L~~L~ 193 (682)
++..|+|++|.+++ +|. .++.+++|+.|+|++|++++..| ..+.++++|++|+|++|++++.+|..+. ++|++|+
T Consensus 377 ~L~~L~L~~n~l~~-~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 454 (606)
T 3vq2_A 377 SLRHLDLSFNGAII-MSA-NFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLK 454 (606)
T ss_dssp CCCEEECCSCSEEE-ECC-CCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEE
T ss_pred cccEeECCCCcccc-chh-hccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEE
Confidence 34555555555553 443 45555555555555555554444 3455555555555555555554554443 4555555
Q ss_pred cccccCcc-cCCcchhhhccccceeccCCcccCCCCCC--CCCCCCeEEecccCCCCCCCccccCCCCCC
Q 005693 194 LSFNSFTG-NIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSS 260 (682)
Q Consensus 194 ls~N~l~g-~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~l~~L~~l~ls~N~l~g~~p~~~~~l~~l~ 260 (682)
|++|++++ .+|..|+++++|+.|+|++|++++.+|.. .+++|+.|+|++|++++.+|..+.++++|+
T Consensus 455 l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 524 (606)
T 3vq2_A 455 MAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLS 524 (606)
T ss_dssp CTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCC
T ss_pred CCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCC
Confidence 55555554 24445555555555555555555444432 445555555555555544454444444443
No 307
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.62 E-value=2.1e-16 Score=158.09 Aligned_cols=141 Identities=16% Similarity=0.196 Sum_probs=112.8
Q ss_pred CeEEEEEeCCCcccccCCccccCCCCCCcEEEccCCC-CCCCCCCcCCCCCCCcEEeecc-cccCCcCCCCcc--cccce
Q 005693 116 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNV-LTGGLPSEITSLPSLRYLYLQH-NNFSGKIPSSFS--PQLVV 191 (682)
Q Consensus 116 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~-l~g~~p~~~~~l~~L~~L~L~~-N~l~g~~p~~~~--~~L~~ 191 (682)
..++.|+|++|+++ .+|+..|+++++|++|+|++|+ +++..+..|.++++|++|+|++ |++++..+..|. ++|++
T Consensus 31 ~~l~~L~l~~n~l~-~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~ 109 (239)
T 2xwt_C 31 PSTQTLKLIETHLR-TIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKF 109 (239)
T ss_dssp TTCCEEEEESCCCS-EECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCE
T ss_pred CcccEEEEeCCcce-EECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCE
Confidence 36889999999998 4555579999999999999997 8866666899999999999998 999966666665 78999
Q ss_pred eecccccCcccCCcchhhhcccc---ceeccCC-cccCCCCCC--CCCCCC-eEEecccCCCCCCCccccCCCCCC
Q 005693 192 LDLSFNSFTGNIPQSIQNLTQLT---GLSLQSN-NLSGSIPNF--DIPKLR-HLNLSYNGLKGSIPSSLQKFPNSS 260 (682)
Q Consensus 192 L~ls~N~l~g~~p~~~~~l~~L~---~L~l~~N-~l~g~~p~~--~l~~L~-~l~ls~N~l~g~~p~~~~~l~~l~ 260 (682)
|+|++|++++ +|. |..+++|+ .|++++| ++++..+.. .+++|+ .|++++|+++ .+|......++|+
T Consensus 110 L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~ 182 (239)
T 2xwt_C 110 LGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLD 182 (239)
T ss_dssp EEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTTCEEE
T ss_pred EeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCCCCCC
Confidence 9999999996 666 88888888 9999999 888766643 788899 9999999988 5655432224443
No 308
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.62 E-value=1.4e-15 Score=146.89 Aligned_cols=123 Identities=30% Similarity=0.379 Sum_probs=109.4
Q ss_pred EEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecccccCCcCCCCcc--cccceeecccc
Q 005693 120 GLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFN 197 (682)
Q Consensus 120 ~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~--~~L~~L~ls~N 197 (682)
.+++++++++ .+|.+ + .++|++|+|++|+|+ .+|..|.++++|+.|+|++|+|++..|..|. ++|++|+|++|
T Consensus 14 ~l~~~~~~l~-~ip~~-~--~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 14 VVRCSNKGLK-VLPKG-I--PRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp EEECTTSCCS-SCCSC-C--CTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred EEEcCCCCCC-cCCCC-C--CCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 4677788887 78873 3 368999999999999 8889999999999999999999988777776 89999999999
Q ss_pred cCcccCCcchhhhccccceeccCCcccCCCCCC--CCCCCCeEEecccCCCC
Q 005693 198 SFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKG 247 (682)
Q Consensus 198 ~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~l~~L~~l~ls~N~l~g 247 (682)
+|++..|..|.++++|+.|+|++|+|++..+.. .+++|+.|+|++|.+..
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 999988899999999999999999999766653 78999999999999874
No 309
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.62 E-value=8.8e-16 Score=175.57 Aligned_cols=152 Identities=20% Similarity=0.201 Sum_probs=125.9
Q ss_pred CcceEEecCCCCeEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecccccCCcCCCC
Q 005693 105 SWVGINCTQDRTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSS 184 (682)
Q Consensus 105 ~w~gv~C~~~~~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~ 184 (682)
.|....|..... ..+=++.+|+ .+|.+ + -+++++|||++|+|++..|..|.++++|++|+|++|+|++..|..
T Consensus 23 ~~~~c~~~~~~~---~~~c~~~~l~-~vP~~-l--p~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~ 95 (635)
T 4g8a_A 23 SWEPCVEVVPNI---TYQCMELNFY-KIPDN-L--PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGA 95 (635)
T ss_dssp --CCSEEEETTT---EEECTTSCCS-SCCSS-S--CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTT
T ss_pred CCCCccccCCCC---EEECCCCCcC-ccCCC-C--CcCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhH
Confidence 366555554322 3467788888 78873 3 257999999999999777789999999999999999999877777
Q ss_pred cc--cccceeecccccCcccCCcchhhhccccceeccCCcccCCCCCC--CCCCCCeEEecccCCCC-CCCccccCCCCC
Q 005693 185 FS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKG-SIPSSLQKFPNS 259 (682)
Q Consensus 185 ~~--~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~l~~L~~l~ls~N~l~g-~~p~~~~~l~~l 259 (682)
|. ++|++|+|++|+|++..|..|.+|++|++|+|++|+|++..+.. .+++|++|+|++|.+++ .+|..++++++|
T Consensus 96 f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L 175 (635)
T 4g8a_A 96 YQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNL 175 (635)
T ss_dssp TTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTC
T ss_pred hcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhh
Confidence 86 89999999999999887889999999999999999999877653 89999999999999986 467888888777
Q ss_pred CCCC
Q 005693 260 SFVG 263 (682)
Q Consensus 260 ~~~~ 263 (682)
+.++
T Consensus 176 ~~L~ 179 (635)
T 4g8a_A 176 EHLD 179 (635)
T ss_dssp CEEE
T ss_pred hhhc
Confidence 6654
No 310
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.62 E-value=5.3e-16 Score=174.00 Aligned_cols=151 Identities=25% Similarity=0.363 Sum_probs=123.6
Q ss_pred CCCCCCCCCC----CcceE-EecCCCCeEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcE
Q 005693 95 NWSSTNPICQ----SWVGI-NCTQDRTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRY 169 (682)
Q Consensus 95 ~w~~~~~~c~----~w~gv-~C~~~~~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~ 169 (682)
+|..+.++|. .|.|+ .|.. .+++.|+|++|++++ +|.. + +++|++|+|++|+|+ .+| ..+++|++
T Consensus 35 ~W~~~~~~~~~~~~~~~~l~~C~~--~~L~~L~Ls~n~L~~-lp~~-l--~~~L~~L~Ls~N~l~-~ip---~~l~~L~~ 104 (571)
T 3cvr_A 35 KWEKQALPGENRNEAVSLLKECLI--NQFSELQLNRLNLSS-LPDN-L--PPQITVLEITQNALI-SLP---ELPASLEY 104 (571)
T ss_dssp HHHTTCCTTCCHHHHHHHHHHHHH--TTCSEEECCSSCCSC-CCSC-C--CTTCSEEECCSSCCS-CCC---CCCTTCCE
T ss_pred HHhccCCccccccchhhhcccccc--CCccEEEeCCCCCCc-cCHh-H--cCCCCEEECcCCCCc-ccc---cccCCCCE
Confidence 4665556663 49999 7864 479999999999996 8874 4 388999999999999 788 56899999
Q ss_pred EeecccccCCcCCCCcccccceeecccccCcccCCcchhhhccccceeccCCcccCCCCCCCCCCCCeEEecccCCCCCC
Q 005693 170 LYLQHNNFSGKIPSSFSPQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNLSYNGLKGSI 249 (682)
Q Consensus 170 L~L~~N~l~g~~p~~~~~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~l~~L~~l~ls~N~l~g~~ 249 (682)
|+|++|+|++ +|. +..+|++|+|++|+|++ +|. .+++|+.|+|++|+|++ +|. .+++|+.|+|++|+|++ +
T Consensus 105 L~Ls~N~l~~-ip~-l~~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~-~l~~L~~L~Ls~N~L~~-l 175 (571)
T 3cvr_A 105 LDACDNRLST-LPE-LPASLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE-LPTSLEVLSVRNNQLTF-L 175 (571)
T ss_dssp EECCSSCCSC-CCC-CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CCTTCCEEECCSSCCSC-C
T ss_pred EEccCCCCCC-cch-hhcCCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC-cCCCcCEEECCCCCCCC-c
Confidence 9999999997 888 77899999999999997 776 68999999999999997 565 78899999999999997 7
Q ss_pred Ccccc-CCCCCCCCCCC
Q 005693 250 PSSLQ-KFPNSSFVGNS 265 (682)
Q Consensus 250 p~~~~-~l~~l~~~~n~ 265 (682)
|. |. ++..|.+.+|.
T Consensus 176 p~-l~~~L~~L~Ls~N~ 191 (571)
T 3cvr_A 176 PE-LPESLEALDVSTNL 191 (571)
T ss_dssp CC-CCTTCCEEECCSSC
T ss_pred ch-hhCCCCEEECcCCC
Confidence 77 54 34444444443
No 311
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.62 E-value=1.4e-16 Score=166.17 Aligned_cols=135 Identities=27% Similarity=0.316 Sum_probs=70.6
Q ss_pred eEEEEEeCCCcccccCCccccCCC-----CCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecccccCCc--CCCCc--c-
Q 005693 117 RVFGLRLPGIGLVGPIPNNTLGKL-----DALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGK--IPSSF--S- 186 (682)
Q Consensus 117 ~v~~l~l~~~~l~g~lp~~~~~~l-----~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~--~p~~~--~- 186 (682)
+++.|+|++|++++. |. .++.+ ++|++|+|++|++++..|..|+++++|++|+|++|++.|. +|..+ .
T Consensus 122 ~L~~L~Ls~N~l~~~-~~-~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~ 199 (312)
T 1wwl_A 122 DLNILNLRNVSWATR-DA-WLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLK 199 (312)
T ss_dssp CCSEEEEESCBCSSS-SS-HHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTS
T ss_pred CccEEEccCCCCcch-hH-HHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhcc
Confidence 455556666655544 43 44444 5566666666666555555556666666666666655543 12111 1
Q ss_pred -cccceeecccccCcc--cCC-cchhhhccccceeccCCcccCCCCC--C-CCCCCCeEEecccCCCCCCCcccc
Q 005693 187 -PQLVVLDLSFNSFTG--NIP-QSIQNLTQLTGLSLQSNNLSGSIPN--F-DIPKLRHLNLSYNGLKGSIPSSLQ 254 (682)
Q Consensus 187 -~~L~~L~ls~N~l~g--~~p-~~~~~l~~L~~L~l~~N~l~g~~p~--~-~l~~L~~l~ls~N~l~g~~p~~~~ 254 (682)
++|++|+|++|+|++ .++ ..+.++++|+.|+|++|++++.+|. . .+++|+.|+|++|+|+ .+|..+.
T Consensus 200 l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~ 273 (312)
T 1wwl_A 200 FPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP 273 (312)
T ss_dssp CTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC
T ss_pred CCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc
Confidence 456666666666552 112 2233455666666666666554432 1 3455666666666665 4554443
No 312
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.62 E-value=1.4e-15 Score=166.65 Aligned_cols=154 Identities=27% Similarity=0.271 Sum_probs=114.8
Q ss_pred CeEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCc-------------------------CCCCCCCcEE
Q 005693 116 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSE-------------------------ITSLPSLRYL 170 (682)
Q Consensus 116 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~-------------------------~~~l~~L~~L 170 (682)
.++..|+|++|+++ .+|+..|..+++|++|+|++|+|++..+.. |.++++|++|
T Consensus 112 ~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L 190 (440)
T 3zyj_A 112 ANLNTLELFDNRLT-TIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYL 190 (440)
T ss_dssp SSCCEEECCSSCCS-SCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEE
T ss_pred ccCCEEECCCCcCC-eeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCee
Confidence 46778888888887 556556888888888888888777444434 4455555555
Q ss_pred eecccccCCcCCCCcc-cccceeecccccCcccCCcchhhhccccceeccCCcccCCCCCC--CCCCCCeEEecccCCCC
Q 005693 171 YLQHNNFSGKIPSSFS-PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKG 247 (682)
Q Consensus 171 ~L~~N~l~g~~p~~~~-~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~l~~L~~l~ls~N~l~g 247 (682)
+|++|+++ .+|.... ++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..+.. .+++|+.|+|++|+|++
T Consensus 191 ~L~~n~l~-~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 269 (440)
T 3zyj_A 191 NLAMCNLR-EIPNLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTL 269 (440)
T ss_dssp ECTTSCCS-SCCCCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCC
T ss_pred cCCCCcCc-cccccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCc
Confidence 56666655 3343111 67889999999999888999999999999999999999877764 88999999999999997
Q ss_pred CCCccccCCCCC---CCCCCCCCCCCC
Q 005693 248 SIPSSLQKFPNS---SFVGNSLLCGPP 271 (682)
Q Consensus 248 ~~p~~~~~l~~l---~~~~n~~~~~~~ 271 (682)
..+..|..+++| .+.+|++.|.+.
T Consensus 270 ~~~~~~~~l~~L~~L~L~~Np~~CdC~ 296 (440)
T 3zyj_A 270 LPHDLFTPLHHLERIHLHHNPWNCNCD 296 (440)
T ss_dssp CCTTTTSSCTTCCEEECCSSCEECSST
T ss_pred cChhHhccccCCCEEEcCCCCccCCCC
Confidence 777666666654 566788877654
No 313
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.61 E-value=6.6e-16 Score=183.01 Aligned_cols=149 Identities=21% Similarity=0.235 Sum_probs=125.9
Q ss_pred CcceEEecCCCCeEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCC-CCcCCCCCCCcEEeecccccCCcCCC
Q 005693 105 SWVGINCTQDRTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGL-PSEITSLPSLRYLYLQHNNFSGKIPS 183 (682)
Q Consensus 105 ~w~gv~C~~~~~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~-p~~~~~l~~L~~L~L~~N~l~g~~p~ 183 (682)
+|..|.+ ...+++.|+|++|.+++..|. .|+++++|++|+|++|.+.+.+ |..|.++++|++|+|++|++++..|.
T Consensus 15 ~L~~vP~--lp~~l~~LdLs~N~i~~i~~~-~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~ 91 (844)
T 3j0a_A 15 NLTQVPQ--VLNTTERLLLSFNYIRTVTAS-SFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPD 91 (844)
T ss_dssp CSSCCCS--SCTTCCEEEEESCCCCEECSS-SCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTT
T ss_pred CCCCCCC--CCCCcCEEECCCCcCCccChh-HCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHh
Confidence 5666665 335788999999999866565 7999999999999999777777 67899999999999999999988888
Q ss_pred Ccc--cccceeecccccCcccCCcc--hhhhccccceeccCCcccCCCCC--C-CCCCCCeEEecccCCCCCCCccccCC
Q 005693 184 SFS--PQLVVLDLSFNSFTGNIPQS--IQNLTQLTGLSLQSNNLSGSIPN--F-DIPKLRHLNLSYNGLKGSIPSSLQKF 256 (682)
Q Consensus 184 ~~~--~~L~~L~ls~N~l~g~~p~~--~~~l~~L~~L~l~~N~l~g~~p~--~-~l~~L~~l~ls~N~l~g~~p~~~~~l 256 (682)
.|. ++|++|+|++|++++.+|.. |++|++|+.|+|++|++++..+. + .+++|+.|+|++|.+++..|..+..+
T Consensus 92 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l 171 (844)
T 3j0a_A 92 AFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPL 171 (844)
T ss_dssp SSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHH
T ss_pred HccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccc
Confidence 887 78999999999999877765 89999999999999999887654 2 88999999999999998888777544
No 314
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.61 E-value=2e-16 Score=185.57 Aligned_cols=144 Identities=22% Similarity=0.355 Sum_probs=131.0
Q ss_pred CeEEEEEeCCCcccc-----------------cCCccccC--CCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecccc
Q 005693 116 TRVFGLRLPGIGLVG-----------------PIPNNTLG--KLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNN 176 (682)
Q Consensus 116 ~~v~~l~l~~~~l~g-----------------~lp~~~~~--~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~ 176 (682)
.++..|+|++|.++| .+|+ .++ +|++|++|+|++|++.|.+|..|++|++|+.|+|++|+
T Consensus 448 ~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~-~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~ 526 (876)
T 4ecn_A 448 TKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENE-ELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNR 526 (876)
T ss_dssp TTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTS-CCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCT
T ss_pred CCCCEEECcCCcCCCCcccccccccccccccccCCh-hhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCC
Confidence 478899999999998 4998 677 99999999999999999999999999999999999998
Q ss_pred -cCC-cCCCCcc--c-------ccceeecccccCcccCCc--chhhhccccceeccCCcccCCCCCC-CCCCCCeEEecc
Q 005693 177 -FSG-KIPSSFS--P-------QLVVLDLSFNSFTGNIPQ--SIQNLTQLTGLSLQSNNLSGSIPNF-DIPKLRHLNLSY 242 (682)
Q Consensus 177 -l~g-~~p~~~~--~-------~L~~L~ls~N~l~g~~p~--~~~~l~~L~~L~l~~N~l~g~~p~~-~l~~L~~l~ls~ 242 (682)
++| .+|..+. + +|++|+|++|+|+ .+|. .|+++++|+.|+|++|+++ .+|.+ .+++|+.|+|++
T Consensus 527 ~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp~~~~L~~L~~L~Ls~ 604 (876)
T 4ecn_A 527 GISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLEAFGTNVKLTDLKLDY 604 (876)
T ss_dssp TSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCCCCCTTSEESEEECCS
T ss_pred CcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cchhhcCCCcceEEECcC
Confidence 998 8888765 3 8999999999999 8999 9999999999999999999 77755 889999999999
Q ss_pred cCCCCCCCccccCCCC-CCCCC
Q 005693 243 NGLKGSIPSSLQKFPN-SSFVG 263 (682)
Q Consensus 243 N~l~g~~p~~~~~l~~-l~~~~ 263 (682)
|+++ .+|..+.++++ |+.++
T Consensus 605 N~l~-~lp~~l~~l~~~L~~L~ 625 (876)
T 4ecn_A 605 NQIE-EIPEDFCAFTDQVEGLG 625 (876)
T ss_dssp SCCS-CCCTTSCEECTTCCEEE
T ss_pred Cccc-cchHHHhhccccCCEEE
Confidence 9999 89988887777 66553
No 315
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.61 E-value=2.4e-16 Score=174.79 Aligned_cols=145 Identities=20% Similarity=0.174 Sum_probs=83.8
Q ss_pred eEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecccccCCcCCCCcc---cccceee
Q 005693 117 RVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS---PQLVVLD 193 (682)
Q Consensus 117 ~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~---~~L~~L~ 193 (682)
.+..|+|++|.+++..+ ..+++|+.|+|++|.|++..|..++++++|++|+|++|+|++.+|..+. ++|++|+
T Consensus 100 ~L~~L~L~~N~l~~~~~----~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~ 175 (487)
T 3oja_A 100 SIETLHAANNNISRVSC----SRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLN 175 (487)
T ss_dssp TCCEEECCSSCCCCEEE----CCCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEE
T ss_pred CcCEEECcCCcCCCCCc----cccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEe
Confidence 45556666666654322 2345666666666666666666666666666666666666665555553 5666666
Q ss_pred cccccCcccCCcchhhhccccceeccCCcccCCCCCC-CCCCCCeEEecccCCCCCCCccccCCCCCC---CCCCCCCC
Q 005693 194 LSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF-DIPKLRHLNLSYNGLKGSIPSSLQKFPNSS---FVGNSLLC 268 (682)
Q Consensus 194 ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~-~l~~L~~l~ls~N~l~g~~p~~~~~l~~l~---~~~n~~~~ 268 (682)
|++|+|++..+ +..+++|+.|+|++|+|++.+|.+ .+++|+.|+|++|+|++ +|..+..+++|. +.+|+..|
T Consensus 176 Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c 251 (487)
T 3oja_A 176 LQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHC 251 (487)
T ss_dssp CTTSCCCEEEC--CCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCH
T ss_pred cCCCccccccc--cccCCCCCEEECCCCCCCCCCHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcC
Confidence 66666665422 234666666666666666655543 55666666666666663 555554444433 33444443
No 316
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.61 E-value=1.8e-15 Score=166.21 Aligned_cols=154 Identities=25% Similarity=0.235 Sum_probs=117.9
Q ss_pred CeEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCc-------------------------CCCCCCCcEE
Q 005693 116 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSE-------------------------ITSLPSLRYL 170 (682)
Q Consensus 116 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~-------------------------~~~l~~L~~L 170 (682)
.++..|+|++|+++ .+|+..|+++++|++|+|++|+|++..+.. |.++++|++|
T Consensus 123 ~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L 201 (452)
T 3zyi_A 123 ASLNTLELFDNWLT-VIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYL 201 (452)
T ss_dssp TTCCEEECCSSCCS-BCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEE
T ss_pred ccCCEEECCCCcCC-ccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEE
Confidence 46788888888888 556557888888888888888887444333 4555666666
Q ss_pred eecccccCCcCCCCcc-cccceeecccccCcccCCcchhhhccccceeccCCcccCCCCCC--CCCCCCeEEecccCCCC
Q 005693 171 YLQHNNFSGKIPSSFS-PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKG 247 (682)
Q Consensus 171 ~L~~N~l~g~~p~~~~-~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~l~~L~~l~ls~N~l~g 247 (682)
+|++|++++ +|.... ++|++|+|++|+|++..|..|.++++|+.|+|++|++++..|.. .+++|+.|+|++|+|++
T Consensus 202 ~L~~n~l~~-~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 280 (452)
T 3zyi_A 202 NLGMCNIKD-MPNLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSS 280 (452)
T ss_dssp ECTTSCCSS-CCCCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSC
T ss_pred ECCCCcccc-cccccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCc
Confidence 666666664 332111 68999999999999888999999999999999999999887764 88999999999999997
Q ss_pred CCCccccCCCCC---CCCCCCCCCCCC
Q 005693 248 SIPSSLQKFPNS---SFVGNSLLCGPP 271 (682)
Q Consensus 248 ~~p~~~~~l~~l---~~~~n~~~~~~~ 271 (682)
..+..+..+++| .+.+|++.|.+.
T Consensus 281 ~~~~~~~~l~~L~~L~L~~Np~~CdC~ 307 (452)
T 3zyi_A 281 LPHDLFTPLRYLVELHLHHNPWNCDCD 307 (452)
T ss_dssp CCTTSSTTCTTCCEEECCSSCEECSTT
T ss_pred cChHHhccccCCCEEEccCCCcCCCCC
Confidence 776666666654 566788777654
No 317
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.61 E-value=3.7e-16 Score=144.25 Aligned_cols=122 Identities=26% Similarity=0.281 Sum_probs=75.4
Q ss_pred eEEEEEeCCCccc-ccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecccccCCcCCCCcc--cccceee
Q 005693 117 RVFGLRLPGIGLV-GPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLD 193 (682)
Q Consensus 117 ~v~~l~l~~~~l~-g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~--~~L~~L~ 193 (682)
+++.|++++|+++ +.+|. .++.+++|++|+|++|.+++. ..++++++|++|+|++|++++.+|..+. ++|++|+
T Consensus 18 ~l~~L~l~~n~l~~~~~~~-~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 18 DVKELVLDNSRSNEGKLEG-LTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GCSEEECTTCBCBTTBCCS-CCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred cCeEEEccCCcCChhHHHH-HHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 4566666666666 56665 566666666666666666654 5566666666666666666655555443 5666666
Q ss_pred cccccCccc-CCcchhhhccccceeccCCcccCCCC---C-C-CCCCCCeEEec
Q 005693 194 LSFNSFTGN-IPQSIQNLTQLTGLSLQSNNLSGSIP---N-F-DIPKLRHLNLS 241 (682)
Q Consensus 194 ls~N~l~g~-~p~~~~~l~~L~~L~l~~N~l~g~~p---~-~-~l~~L~~l~ls 241 (682)
|++|++++. .|..++++++|+.|++++|++++..+ . . .+++|+.||++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 666666652 33566666666666666666665544 1 1 55666666654
No 318
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.61 E-value=9.7e-16 Score=148.59 Aligned_cols=140 Identities=19% Similarity=0.330 Sum_probs=118.5
Q ss_pred eEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecccccCCcCCCCcc--cccceeec
Q 005693 117 RVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDL 194 (682)
Q Consensus 117 ~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~--~~L~~L~l 194 (682)
+++.|++++|++. .+| .+..+++|++|+|++|.++ .++.+..+++|++|+|++|++++..|..+. ++|++|+|
T Consensus 45 ~L~~L~l~~n~i~-~l~--~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L 119 (197)
T 4ezg_A 45 SLTYITLANINVT-DLT--GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDI 119 (197)
T ss_dssp TCCEEEEESSCCS-CCT--TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEEC
T ss_pred CccEEeccCCCcc-ChH--HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEe
Confidence 5788999999998 677 4899999999999999775 334799999999999999999987888877 79999999
Q ss_pred ccccCcccCCcchhhhccccceeccCCcccCCCCCC-CCCCCCeEEecccCCCCCCCccccCCCCCCCCC
Q 005693 195 SFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF-DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFVG 263 (682)
Q Consensus 195 s~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~-~l~~L~~l~ls~N~l~g~~p~~~~~l~~l~~~~ 263 (682)
++|++++..|..++++++|+.|+|++|++.+.+|.. .+++|+.|++++|++++ ++ .+..+++|+.++
T Consensus 120 s~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~ 187 (197)
T 4ezg_A 120 SHSAHDDSILTKINTLPKVNSIDLSYNGAITDIMPLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLY 187 (197)
T ss_dssp CSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCGGGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEE
T ss_pred cCCccCcHhHHHHhhCCCCCEEEccCCCCccccHhhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEE
Confidence 999999989999999999999999999833345544 88999999999999996 44 566666665543
No 319
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.60 E-value=5.3e-16 Score=161.65 Aligned_cols=148 Identities=22% Similarity=0.214 Sum_probs=104.2
Q ss_pred CeEEEEEeCCCcccccCCc---cccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecccccCCc--CC-CCc-c--
Q 005693 116 TRVFGLRLPGIGLVGPIPN---NTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGK--IP-SSF-S-- 186 (682)
Q Consensus 116 ~~v~~l~l~~~~l~g~lp~---~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~--~p-~~~-~-- 186 (682)
.++..|+|++|.+++..+. ..+..+++|++|+|++|++++..|..|+++++|++|+|++|++.+. ++ ..+ .
T Consensus 117 ~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l 196 (310)
T 4glp_A 117 LALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKF 196 (310)
T ss_dssp BCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSS
T ss_pred CCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcC
Confidence 4677788888888876551 2355788888888888888877778888888888888888887652 22 221 2
Q ss_pred cccceeecccccCcccCCc----chhhhccccceeccCCcccCCCCCC--C---CCCCCeEEecccCCCCCCCcccc-CC
Q 005693 187 PQLVVLDLSFNSFTGNIPQ----SIQNLTQLTGLSLQSNNLSGSIPNF--D---IPKLRHLNLSYNGLKGSIPSSLQ-KF 256 (682)
Q Consensus 187 ~~L~~L~ls~N~l~g~~p~----~~~~l~~L~~L~l~~N~l~g~~p~~--~---l~~L~~l~ls~N~l~g~~p~~~~-~l 256 (682)
++|++|+|++|+|+ .+|. .++++++|+.|+|++|+|++..|.. . +++|++|+|++|+|+ .+|..+. ++
T Consensus 197 ~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~~~L 274 (310)
T 4glp_A 197 PAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLPAKL 274 (310)
T ss_dssp CCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCCSCC
T ss_pred CCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhcCCC
Confidence 67888888888887 3333 2567788888888888888775532 3 368888888888888 6666553 44
Q ss_pred CCCCCCCCC
Q 005693 257 PNSSFVGNS 265 (682)
Q Consensus 257 ~~l~~~~n~ 265 (682)
..|.+.+|.
T Consensus 275 ~~L~Ls~N~ 283 (310)
T 4glp_A 275 RVLDLSSNR 283 (310)
T ss_dssp SCEECCSCC
T ss_pred CEEECCCCc
Confidence 444444443
No 320
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.60 E-value=1.2e-15 Score=176.51 Aligned_cols=149 Identities=26% Similarity=0.289 Sum_probs=127.8
Q ss_pred CcceEEecCC---------CCeEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeeccc
Q 005693 105 SWVGINCTQD---------RTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHN 175 (682)
Q Consensus 105 ~w~gv~C~~~---------~~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N 175 (682)
.+..|.|+.. ..+++.|+|++|++++ +|+..|+++++|++|+|++|.+++..|..|+++++|++|+|++|
T Consensus 5 ~~~~~~cs~~~L~~ip~~~~~~l~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n 83 (680)
T 1ziw_A 5 SHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRR-LPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHN 83 (680)
T ss_dssp BSSEEECCSSCCSSCCSCSCTTCSEEECCSSCCCC-CCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSS
T ss_pred ECCeeECCCCCccccccccCCCCcEEECCCCCCCC-cCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCC
Confidence 4566777642 2478999999999995 55557999999999999999999999999999999999999999
Q ss_pred ccCCcCCCCcc--cccceeecccccCcccCCcchhhhccccceeccCCcccCCCCCC--CCCCCCeEEecccCCCCCCCc
Q 005693 176 NFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPS 251 (682)
Q Consensus 176 ~l~g~~p~~~~--~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~l~~L~~l~ls~N~l~g~~p~ 251 (682)
++++..+..|. ++|++|+|++|++++..|..|+++++|++|+|++|++++..|.. .+++|++|+|++|++++..+.
T Consensus 84 ~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 163 (680)
T 1ziw_A 84 ELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSE 163 (680)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHH
T ss_pred ccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHH
Confidence 99965555666 79999999999999888889999999999999999999887764 899999999999999987776
Q ss_pred ccc
Q 005693 252 SLQ 254 (682)
Q Consensus 252 ~~~ 254 (682)
.+.
T Consensus 164 ~~~ 166 (680)
T 1ziw_A 164 ELD 166 (680)
T ss_dssp HHG
T ss_pred Hhh
Confidence 543
No 321
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.60 E-value=8e-16 Score=175.46 Aligned_cols=143 Identities=24% Similarity=0.229 Sum_probs=109.3
Q ss_pred CeEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCc-CCCCCCCcEEeecccccCCcCCCCcc--ccccee
Q 005693 116 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSE-ITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVL 192 (682)
Q Consensus 116 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~-~~~l~~L~~L~L~~N~l~g~~p~~~~--~~L~~L 192 (682)
.++..|++++|.+.+..|. .++.+++|+.|+|++|++++..|.. +.++++|+.|+|++|.+++..|..+. ++|++|
T Consensus 376 ~~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 454 (606)
T 3t6q_A 376 SHLQSLNLSYNEPLSLKTE-AFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHL 454 (606)
T ss_dssp TTCCEEECCSCSCEEECTT-TTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEE
T ss_pred CCCCEEECCCCcCCcCCHH-HhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEE
Confidence 4677888888888866555 6888888888888888888776654 77888888888888888877777665 678888
Q ss_pred ecccccCccc---CCcchhhhccccceeccCCcccCCCCCC--CCCCCCeEEecccCCCCCCCccccCCCCC
Q 005693 193 DLSFNSFTGN---IPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNS 259 (682)
Q Consensus 193 ~ls~N~l~g~---~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~l~~L~~l~ls~N~l~g~~p~~~~~l~~l 259 (682)
+|++|++++. .+..+..+++|+.|+|++|++++.+|.. .+++|+.|+|++|++++..|..+.+++.|
T Consensus 455 ~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L 526 (606)
T 3t6q_A 455 NLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI 526 (606)
T ss_dssp ECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC
T ss_pred ECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc
Confidence 8888888762 3356778888888888888888776653 77788888888888887777777777766
No 322
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.59 E-value=6.9e-16 Score=171.08 Aligned_cols=97 Identities=21% Similarity=0.216 Sum_probs=53.2
Q ss_pred CCCcEEeecccccCCcCCCCcc--cccceeecccccCcccCCcchh-hhccccceeccCCcccCCCCCCCCCCCCeEEec
Q 005693 165 PSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQ-NLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNLS 241 (682)
Q Consensus 165 ~~L~~L~L~~N~l~g~~p~~~~--~~L~~L~ls~N~l~g~~p~~~~-~l~~L~~L~l~~N~l~g~~p~~~l~~L~~l~ls 241 (682)
++|+.|+|++|++++..|..+. ++|++|+|++|+|++.+|..+. ++++|+.|+|++|.|++..+...+++|+.|+|+
T Consensus 120 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~~~~l~~L~~L~Ls 199 (487)
T 3oja_A 120 QGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKGQVVFAKLKTLDLS 199 (487)
T ss_dssp SSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEECCCCCTTCCEEECC
T ss_pred CCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccccccccCCCCCEEECC
Confidence 3444444444444444444443 4566666666666655555554 556666666666666655444456666666666
Q ss_pred ccCCCCCCCccccCCCCCCCC
Q 005693 242 YNGLKGSIPSSLQKFPNSSFV 262 (682)
Q Consensus 242 ~N~l~g~~p~~~~~l~~l~~~ 262 (682)
+|++++ +|+.+..+++|..+
T Consensus 200 ~N~l~~-~~~~~~~l~~L~~L 219 (487)
T 3oja_A 200 SNKLAF-MGPEFQSAAGVTWI 219 (487)
T ss_dssp SSCCCE-ECGGGGGGTTCSEE
T ss_pred CCCCCC-CCHhHcCCCCccEE
Confidence 666664 33335555555443
No 323
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.59 E-value=3.2e-15 Score=163.72 Aligned_cols=141 Identities=22% Similarity=0.203 Sum_probs=97.3
Q ss_pred CcceEEecCCC---------CeEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeeccc
Q 005693 105 SWVGINCTQDR---------TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHN 175 (682)
Q Consensus 105 ~w~gv~C~~~~---------~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N 175 (682)
.|..|.|.... ..++.|+|++|++.+..+ ..|.++++|++|+|++|+|++..|..|.++++|++|+|++|
T Consensus 44 ~~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~-~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n 122 (440)
T 3zyj_A 44 QFSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIKV-NSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDN 122 (440)
T ss_dssp TSCEEECCSCCCSSCCSCCCTTCSEEECCSCCCCEECT-TTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSS
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEEccCCcCCeeCH-HHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCC
Confidence 46788887532 356788999999885444 47888999999999999888777788888888999999888
Q ss_pred ccCCcCCCCcc--cccceeecccccCcccCCcchhhhccccceeccCCcccCCCCCC---CCCCCCeEEecccCCC
Q 005693 176 NFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF---DIPKLRHLNLSYNGLK 246 (682)
Q Consensus 176 ~l~g~~p~~~~--~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~---~l~~L~~l~ls~N~l~ 246 (682)
+|++..+..|. ++|++|+|++|+|++..+..|.++++|+.|+|++|+..+.++.. .+++|+.|+|++|+++
T Consensus 123 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~ 198 (440)
T 3zyj_A 123 RLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR 198 (440)
T ss_dssp CCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS
T ss_pred cCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc
Confidence 88865555555 67888888888887665556666666666666554333333321 4444444444444444
No 324
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.59 E-value=2.7e-15 Score=157.85 Aligned_cols=143 Identities=23% Similarity=0.359 Sum_probs=112.6
Q ss_pred eEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCC--CCCCCcCCCCCCCcEEeecccccCCcCCCCcccccceeec
Q 005693 117 RVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLT--GGLPSEITSLPSLRYLYLQHNNFSGKIPSSFSPQLVVLDL 194 (682)
Q Consensus 117 ~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~--g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~L~~L~l 194 (682)
++..|++++|.+. .+|+..++++++|++|+|++|.++ +..|..+..+ +|+.|++++|++++ +|..+.++|++|+|
T Consensus 124 ~L~~L~l~~n~i~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~~~L~~L~l 200 (332)
T 2ft3_A 124 SLVELRIHDNRIR-KVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLPETLNELHL 200 (332)
T ss_dssp TCCEEECCSSCCC-CCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSCSSCSCCBC
T ss_pred cCCEEECCCCccC-ccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-cCccccCCCCEEEC
Confidence 4666667777666 445445777777777777777774 3566667777 77777777777774 67666688999999
Q ss_pred ccccCcccCCcchhhhccccceeccCCcccCCCCCC--CCCCCCeEEecccCCCCCCCccccCCCCCCCCC
Q 005693 195 SFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFVG 263 (682)
Q Consensus 195 s~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~l~~L~~l~ls~N~l~g~~p~~~~~l~~l~~~~ 263 (682)
++|++++..|..|.++++|+.|+|++|++++..+.. .+++|+.|+|++|+++ .+|..+.++++|+.++
T Consensus 201 ~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~ 270 (332)
T 2ft3_A 201 DHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVY 270 (332)
T ss_dssp CSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEE
T ss_pred CCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEE
Confidence 999999888889999999999999999999877753 7899999999999999 7888888887776654
No 325
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.59 E-value=1.5e-15 Score=167.91 Aligned_cols=147 Identities=20% Similarity=0.155 Sum_probs=130.7
Q ss_pred CeEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecccccCCcCCCCcc--cccceee
Q 005693 116 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLD 193 (682)
Q Consensus 116 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~--~~L~~L~ 193 (682)
.++..|+|++|.+++..|. .|+++++|++|+|++|++++..+..|.++++|++|+|++|++++..|..|. ++|++|+
T Consensus 56 ~~L~~L~L~~n~i~~~~~~-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 134 (477)
T 2id5_A 56 PHLEELELNENIVSAVEPG-AFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLE 134 (477)
T ss_dssp TTCCEEECTTSCCCEECTT-TTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCccCEeChh-hhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEE
Confidence 4789999999999976666 899999999999999999966666789999999999999999988888877 7999999
Q ss_pred cccccCcccCCcchhhhccccceeccCCcccCCCCC--CCCCCCCeEEecccCCCCCCCccccCCCCCCCCC
Q 005693 194 LSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPN--FDIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFVG 263 (682)
Q Consensus 194 ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~--~~l~~L~~l~ls~N~l~g~~p~~~~~l~~l~~~~ 263 (682)
|++|++++..|..|.++++|+.|+|++|++++..+. ..+++|+.|+|++|++++..+..|.++++|+.++
T Consensus 135 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~ 206 (477)
T 2id5_A 135 VGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLE 206 (477)
T ss_dssp ECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEE
T ss_pred CCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceee
Confidence 999999999999999999999999999999976554 2889999999999999988777888888777654
No 326
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.59 E-value=2.4e-15 Score=158.09 Aligned_cols=144 Identities=25% Similarity=0.357 Sum_probs=124.6
Q ss_pred eEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCC--CCCCCcCCCCCCCcEEeecccccCCcCCCCcccccceeec
Q 005693 117 RVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLT--GGLPSEITSLPSLRYLYLQHNNFSGKIPSSFSPQLVVLDL 194 (682)
Q Consensus 117 ~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~--g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~L~~L~l 194 (682)
.+..|++++|.+.+ +++..++++++|++|+|++|.++ +..|..+.++++|++|+|++|+++ .+|..+.++|++|+|
T Consensus 122 ~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~~~L~~L~l 199 (330)
T 1xku_A 122 TLQELRVHENEITK-VRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLPPSLTELHL 199 (330)
T ss_dssp TCCEEECCSSCCCB-BCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSCCTTCSEEEC
T ss_pred cccEEECCCCcccc-cCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc-cCCccccccCCEEEC
Confidence 56777777777774 44446889999999999999996 377888999999999999999998 578777799999999
Q ss_pred ccccCcccCCcchhhhccccceeccCCcccCCCCCC--CCCCCCeEEecccCCCCCCCccccCCCCCCCCC
Q 005693 195 SFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFVG 263 (682)
Q Consensus 195 s~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~l~~L~~l~ls~N~l~g~~p~~~~~l~~l~~~~ 263 (682)
++|++++..|..|.++++|+.|+|++|++++..+.. .+++|+.|+|++|+++ .+|..+..+++|+.++
T Consensus 200 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~ 269 (330)
T 1xku_A 200 DGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVY 269 (330)
T ss_dssp TTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEE
T ss_pred CCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEE
Confidence 999999998999999999999999999999877753 8899999999999999 8898888888777654
No 327
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.58 E-value=2.5e-15 Score=171.06 Aligned_cols=108 Identities=24% Similarity=0.264 Sum_probs=68.9
Q ss_pred eEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecccccCCcCCCCcc--cccceeec
Q 005693 117 RVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDL 194 (682)
Q Consensus 117 ~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~--~~L~~L~l 194 (682)
++..|+|++|.+++..|. .|+++++|++|+|++|.|++..|..|+++++|++|+|++|.|++..+..|. ++|++|+|
T Consensus 76 ~L~~L~L~~n~l~~~~~~-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 154 (597)
T 3oja_B 76 QVELLNLNDLQIEEIDTY-AFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSM 154 (597)
T ss_dssp CCSEEECTTSCCCEECTT-TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCcEEECCCCCCCCCChH-HhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEe
Confidence 456666666666644333 566666677777776666666666666666677777776666643333333 56666666
Q ss_pred ccccCcccCCcchhhhccccceeccCCcccC
Q 005693 195 SFNSFTGNIPQSIQNLTQLTGLSLQSNNLSG 225 (682)
Q Consensus 195 s~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g 225 (682)
++|+|++..|..|+++++|+.|+|++|+|++
T Consensus 155 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 185 (597)
T 3oja_B 155 SNNNLERIEDDTFQATTSLQNLQLSSNRLTH 185 (597)
T ss_dssp CSSCCCBCCTTTTTTCTTCCEEECTTSCCSB
T ss_pred eCCcCCCCChhhhhcCCcCcEEECcCCCCCC
Confidence 6666666666666666666666666666654
No 328
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.58 E-value=3.4e-15 Score=168.75 Aligned_cols=150 Identities=23% Similarity=0.333 Sum_probs=124.2
Q ss_pred CCeEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCC--CCCCcCCCCCCCcEEeecccccCCcCCCCc-c--ccc
Q 005693 115 RTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTG--GLPSEITSLPSLRYLYLQHNNFSGKIPSSF-S--PQL 189 (682)
Q Consensus 115 ~~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g--~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~-~--~~L 189 (682)
-.+++.|+|++|.+++.+|. .++++++|++|+|++|++++ .+|..+.++++|++|+|++|++++.+|... . ++|
T Consensus 352 l~~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L 430 (562)
T 3a79_B 352 PSSFTFLNFTQNVFTDSVFQ-GCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESI 430 (562)
T ss_dssp CCCCCEEECCSSCCCTTTTT-TCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTC
T ss_pred CCCceEEECCCCccccchhh-hhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccC
Confidence 35788999999999988887 79999999999999999996 345678999999999999999998777653 3 789
Q ss_pred ceeecccccCcccCCcchhhhccccceeccCCcccCCCCC-C-CCCCCCeEEecccCCCCCCCcc-ccCCCCCC---CCC
Q 005693 190 VVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPN-F-DIPKLRHLNLSYNGLKGSIPSS-LQKFPNSS---FVG 263 (682)
Q Consensus 190 ~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~-~-~l~~L~~l~ls~N~l~g~~p~~-~~~l~~l~---~~~ 263 (682)
++|+|++|+|++.+|..+. ++|+.|+|++|+|+ .+|. . .+++|+.|+|++|+++ .+|.. +..+++|+ +.+
T Consensus 431 ~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~ 506 (562)
T 3a79_B 431 LVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWLHD 506 (562)
T ss_dssp CEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCC-CCCTTSTTTCTTCCCEECCS
T ss_pred CEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCC-CCCHHHHhcCCCCCEEEecC
Confidence 9999999999988887765 78999999999999 4554 3 8899999999999999 56665 77666655 456
Q ss_pred CCCCCC
Q 005693 264 NSLLCG 269 (682)
Q Consensus 264 n~~~~~ 269 (682)
|+..|.
T Consensus 507 N~~~c~ 512 (562)
T 3a79_B 507 NPWDCT 512 (562)
T ss_dssp CCBCCC
T ss_pred CCcCCC
Confidence 666654
No 329
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.58 E-value=9.4e-16 Score=141.47 Aligned_cols=123 Identities=17% Similarity=0.258 Sum_probs=108.2
Q ss_pred CCCCCcEEEccCCCCC-CCCCCcCCCCCCCcEEeecccccCCcCCCCcc--cccceeecccccCcccCCcchhhhccccc
Q 005693 139 KLDALEVLSLRSNVLT-GGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTG 215 (682)
Q Consensus 139 ~l~~L~~L~L~~N~l~-g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~--~~L~~L~ls~N~l~g~~p~~~~~l~~L~~ 215 (682)
..++|+.|+|++|+++ +.+|..+..+++|++|+|++|++++. ..+. ++|++|+|++|++++.+|..+.++++|+.
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 92 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTH 92 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCE
T ss_pred CCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCE
Confidence 4578999999999998 89999999999999999999999976 4554 79999999999999889999999999999
Q ss_pred eeccCCcccCCC--CCC-CCCCCCeEEecccCCCCCCC---ccccCCCCCCCCC
Q 005693 216 LSLQSNNLSGSI--PNF-DIPKLRHLNLSYNGLKGSIP---SSLQKFPNSSFVG 263 (682)
Q Consensus 216 L~l~~N~l~g~~--p~~-~l~~L~~l~ls~N~l~g~~p---~~~~~l~~l~~~~ 263 (682)
|+|++|++++.. +.. .+++|+.|++++|++++..+ ..+..+++|+.++
T Consensus 93 L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~ 146 (149)
T 2je0_A 93 LNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLD 146 (149)
T ss_dssp EECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEET
T ss_pred EECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCccccc
Confidence 999999999742 333 89999999999999997665 4688888887765
No 330
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.58 E-value=2.7e-15 Score=141.39 Aligned_cols=125 Identities=22% Similarity=0.285 Sum_probs=109.0
Q ss_pred CCCCCCcEEEccCCCCC-CCCCCcCCCCCCCcEEeecccccCCcCCCCcc--cccceeecccccCcccCCcchhhhcccc
Q 005693 138 GKLDALEVLSLRSNVLT-GGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLT 214 (682)
Q Consensus 138 ~~l~~L~~L~L~~N~l~-g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~--~~L~~L~ls~N~l~g~~p~~~~~l~~L~ 214 (682)
...++|+.|+|++|+++ +.+|..+..+++|++|+|++|++++. ..+. ++|++|+|++|++++.+|..+.++++|+
T Consensus 21 ~~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 98 (168)
T 2ell_A 21 RTPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLT 98 (168)
T ss_dssp SCTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCC
T ss_pred CCcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCC
Confidence 34578999999999998 89999999999999999999999976 4554 7999999999999988999999999999
Q ss_pred ceeccCCcccCCC--CCC-CCCCCCeEEecccCCCCCCC---ccccCCCCCCCCCC
Q 005693 215 GLSLQSNNLSGSI--PNF-DIPKLRHLNLSYNGLKGSIP---SSLQKFPNSSFVGN 264 (682)
Q Consensus 215 ~L~l~~N~l~g~~--p~~-~l~~L~~l~ls~N~l~g~~p---~~~~~l~~l~~~~n 264 (682)
.|+|++|++++.. +.. .+++|+.|++++|.+++..+ ..+..+++|+.++-
T Consensus 99 ~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l 154 (168)
T 2ell_A 99 HLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDG 154 (168)
T ss_dssp EEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETT
T ss_pred EEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecC
Confidence 9999999999754 233 89999999999999996555 47888888887763
No 331
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.58 E-value=5.3e-16 Score=161.81 Aligned_cols=146 Identities=21% Similarity=0.252 Sum_probs=118.2
Q ss_pred CeEEEEEeCCCcccccCCcccc-CCCCCCcEEEccCCCCCCCCCCcCCCC-----CCCcEEeecccccCCcCCCCcc--c
Q 005693 116 TRVFGLRLPGIGLVGPIPNNTL-GKLDALEVLSLRSNVLTGGLPSEITSL-----PSLRYLYLQHNNFSGKIPSSFS--P 187 (682)
Q Consensus 116 ~~v~~l~l~~~~l~g~lp~~~~-~~l~~L~~L~L~~N~l~g~~p~~~~~l-----~~L~~L~L~~N~l~g~~p~~~~--~ 187 (682)
.++..|+|++|+++|.+|...+ +.+++|++|+|++|++++. |..++++ ++|++|+|++|++++..|..+. +
T Consensus 95 ~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~ 173 (312)
T 1wwl_A 95 SGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFP 173 (312)
T ss_dssp SCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCS
T ss_pred CCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCC
Confidence 4688899999999999988432 8999999999999999977 8888887 8999999999999988778876 7
Q ss_pred ccceeecccccCccc--CCcch--hhhccccceeccCCcccCC--CCCC---CCCCCCeEEecccCCCCCCC-ccccCCC
Q 005693 188 QLVVLDLSFNSFTGN--IPQSI--QNLTQLTGLSLQSNNLSGS--IPNF---DIPKLRHLNLSYNGLKGSIP-SSLQKFP 257 (682)
Q Consensus 188 ~L~~L~ls~N~l~g~--~p~~~--~~l~~L~~L~l~~N~l~g~--~p~~---~l~~L~~l~ls~N~l~g~~p-~~~~~l~ 257 (682)
+|++|+|++|+++|. +|..+ +++++|+.|+|++|+|++. ++.. .+++|+.|+|++|++++.+| ..+..++
T Consensus 174 ~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~ 253 (312)
T 1wwl_A 174 ALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPS 253 (312)
T ss_dssp SCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCT
T ss_pred CCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcC
Confidence 899999999998876 34444 8899999999999999842 2221 67899999999999998775 4455555
Q ss_pred CCCCC
Q 005693 258 NSSFV 262 (682)
Q Consensus 258 ~l~~~ 262 (682)
+|+.+
T Consensus 254 ~L~~L 258 (312)
T 1wwl_A 254 QLNSL 258 (312)
T ss_dssp TCCEE
T ss_pred CCCEE
Confidence 55544
No 332
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.58 E-value=3.2e-15 Score=158.01 Aligned_cols=132 Identities=11% Similarity=0.124 Sum_probs=95.3
Q ss_pred hccccccCeEEEEEEEEcCCceEEEEEeeccccC---------------hhh--------HHHHHHHHHHhcCCCceece
Q 005693 390 AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVG---------------KRD--------FEQQMEIVGRVGQHPNVVPL 446 (682)
Q Consensus 390 ~~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~---------------~~~--------~~~e~~~l~~l~~h~niv~l 446 (682)
.+.||+|+||.||+|...+|+.||||+++..... ... ..+|...+.++ .+.++...
T Consensus 100 ~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL-~~~gv~vp 178 (397)
T 4gyi_A 100 GSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKAL-YEEGFPVP 178 (397)
T ss_dssp EEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHH-HHTTCSCC
T ss_pred cCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHH-HhcCCCCC
Confidence 5689999999999999988999999987532110 001 23455666666 33333221
Q ss_pred EEEEEecCceEEEEeeccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCC
Q 005693 447 RAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDL 526 (682)
Q Consensus 447 ~~~~~~~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~ 526 (682)
.-+.. ...++||||++++.|.++.. . .....++.|++.+|.+||+.| ||||||||.|||+++++
T Consensus 179 ~p~~~--~~~~LVME~i~G~~L~~l~~---------~--~~~~~l~~qll~~l~~lH~~g---IVHrDLKp~NILl~~dg 242 (397)
T 4gyi_A 179 EPIAQ--SRHTIVMSLVDALPMRQVSS---------V--PDPASLYADLIALILRLAKHG---LIHGDFNEFNILIREEK 242 (397)
T ss_dssp CEEEE--ETTEEEEECCSCEEGGGCCC---------C--SCHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEEEEEE
T ss_pred eeeec--cCceEEEEecCCccHhhhcc---------c--HHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHEEEeCCC
Confidence 11111 23579999999988876542 1 124568899999999999998 99999999999999877
Q ss_pred C----------eEEeecCCCCC
Q 005693 527 D----------GCISDFGLTPL 538 (682)
Q Consensus 527 ~----------~kl~DfGla~~ 538 (682)
. +.|+||+-+..
T Consensus 243 d~~d~~~~~~~~~iID~~Q~V~ 264 (397)
T 4gyi_A 243 DAEDPSSITLTPIIIXFPQMVS 264 (397)
T ss_dssp CSSCTTSEEEEEEECCCTTCEE
T ss_pred CcccccccccceEEEEeCCccc
Confidence 3 88999996644
No 333
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.58 E-value=5.1e-15 Score=157.70 Aligned_cols=148 Identities=25% Similarity=0.244 Sum_probs=123.1
Q ss_pred ceEEecCCCCeEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcCC-CCCCCcEEeecccccCCcCCCCc
Q 005693 107 VGINCTQDRTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEIT-SLPSLRYLYLQHNNFSGKIPSSF 185 (682)
Q Consensus 107 ~gv~C~~~~~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~-~l~~L~~L~L~~N~l~g~~p~~~ 185 (682)
....|.. ..+++++++|+ .+|. .+. ..++.|+|++|+|++..+..+. ++++|+.|+|++|+|++..|..|
T Consensus 14 ~~C~C~~-----~~l~c~~~~l~-~iP~-~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~ 84 (361)
T 2xot_A 14 ANCLCAS-----NILSCSKQQLP-NVPQ-SLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAF 84 (361)
T ss_dssp TTCEEET-----TEEECCSSCCS-SCCS-SCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTT
T ss_pred CCCEECC-----CEEEeCCCCcC-ccCc-cCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhc
Confidence 5667764 25899999998 6887 343 4689999999999987777787 99999999999999998777777
Q ss_pred c--cccceeecccccCcccCCcchhhhccccceeccCCcccCCCCCC--CCCCCCeEEecccCCCCCCCccc---cCCCC
Q 005693 186 S--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSL---QKFPN 258 (682)
Q Consensus 186 ~--~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~l~~L~~l~ls~N~l~g~~p~~~---~~l~~ 258 (682)
. ++|++|+|++|+|++..+..|.++++|+.|+|++|+|++..|.. .+++|+.|+|++|+|++..+..| .++++
T Consensus 85 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~ 164 (361)
T 2xot_A 85 VPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPK 164 (361)
T ss_dssp TTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTT
T ss_pred cCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCc
Confidence 6 79999999999999888889999999999999999999877764 89999999999999996444444 45666
Q ss_pred CCCCC
Q 005693 259 SSFVG 263 (682)
Q Consensus 259 l~~~~ 263 (682)
|..++
T Consensus 165 L~~L~ 169 (361)
T 2xot_A 165 LMLLD 169 (361)
T ss_dssp CCEEE
T ss_pred CCEEE
Confidence 65544
No 334
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.57 E-value=4.8e-15 Score=150.59 Aligned_cols=138 Identities=20% Similarity=0.247 Sum_probs=114.6
Q ss_pred CeEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecccccCCcCCCCcccccceeecc
Q 005693 116 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFSPQLVVLDLS 195 (682)
Q Consensus 116 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~L~~L~ls 195 (682)
.++..|++++|+++ .+| .++.+++|++|+|++|+|++..| +.++++|++|+|++|++++ +|....++|++|+|+
T Consensus 41 ~~L~~L~l~~n~i~-~l~--~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~-l~~~~~~~L~~L~L~ 114 (263)
T 1xeu_A 41 SGVQNFNGDNSNIQ-SLA--GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKN-LNGIPSACLSRLFLD 114 (263)
T ss_dssp TTCSEEECTTSCCC-CCT--TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSC-CTTCCCSSCCEEECC
T ss_pred CcCcEEECcCCCcc-cch--HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCCCccCC-cCccccCcccEEEcc
Confidence 36788999999988 576 48999999999999999996554 9999999999999999996 443333899999999
Q ss_pred cccCcccCCcchhhhccccceeccCCcccCCCCCCCCCCCCeEEecccCCCCCCCccccCCCCCCCCC
Q 005693 196 FNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFVG 263 (682)
Q Consensus 196 ~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~l~~~~ 263 (682)
+|+|++. +.+.++++|+.|+|++|+|++..+-..+++|+.|+|++|++++. ..+.++++|..++
T Consensus 115 ~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~~~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~ 178 (263)
T 1xeu_A 115 NNELRDT--DSLIHLKNLEILSIRNNKLKSIVMLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWID 178 (263)
T ss_dssp SSCCSBS--GGGTTCTTCCEEECTTSCCCBCGGGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEE
T ss_pred CCccCCC--hhhcCcccccEEECCCCcCCCChHHccCCCCCEEECCCCcCcch--HHhccCCCCCEEe
Confidence 9999964 36999999999999999999764334889999999999999976 5677777766543
No 335
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.57 E-value=3.2e-15 Score=168.94 Aligned_cols=151 Identities=25% Similarity=0.305 Sum_probs=104.9
Q ss_pred eEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCC-CcCCCCCCCcEEeecccccCCcCCCCcc--cccceee
Q 005693 117 RVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLP-SEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLD 193 (682)
Q Consensus 117 ~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p-~~~~~l~~L~~L~L~~N~l~g~~p~~~~--~~L~~L~ 193 (682)
++..|++++|.+.+ +|+ .++.+++|++|+|++|.+++..| ..+.++++|++|+|++|++++..|..+. ++|++|+
T Consensus 374 ~L~~L~l~~n~l~~-~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 451 (570)
T 2z63_A 374 SLKYLDLSFNGVIT-MSS-NFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLK 451 (570)
T ss_dssp CCCEEECCSCSEEE-EEE-EEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEE
T ss_pred ccCEEECCCCcccc-ccc-cccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEE
Confidence 45566666666663 444 27777777777777777776655 4577777777777777777777776665 6777788
Q ss_pred cccccCc-ccCCcchhhhccccceeccCCcccCCCCCC--CCCCCCeEEecccCCCCCCCccccCCCCCC---CCCCCCC
Q 005693 194 LSFNSFT-GNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSS---FVGNSLL 267 (682)
Q Consensus 194 ls~N~l~-g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~l~~L~~l~ls~N~l~g~~p~~~~~l~~l~---~~~n~~~ 267 (682)
|++|+++ +.+|..+..+++|+.|+|++|++++..|.. .+++|+.|+|++|++++..|..+.++++|+ +.+|+..
T Consensus 452 l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~ 531 (570)
T 2z63_A 452 MAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWD 531 (570)
T ss_dssp CTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred CcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCccc
Confidence 8877776 567777777778888888888777766653 677788888888877776666666666554 3345544
Q ss_pred CC
Q 005693 268 CG 269 (682)
Q Consensus 268 ~~ 269 (682)
|.
T Consensus 532 ~~ 533 (570)
T 2z63_A 532 CS 533 (570)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 336
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.57 E-value=5.9e-15 Score=142.56 Aligned_cols=120 Identities=21% Similarity=0.268 Sum_probs=108.5
Q ss_pred CCcceEEecCCC---------CeEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecc
Q 005693 104 QSWVGINCTQDR---------TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQH 174 (682)
Q Consensus 104 ~~w~gv~C~~~~---------~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~ 174 (682)
|.|..+.|++.. ..++.|+|++|+++ .+|. .|.++++|+.|+|++|+|++..|..|.++++|++|+|++
T Consensus 10 C~~~~l~~~~~~l~~ip~~~~~~l~~L~L~~n~i~-~ip~-~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~ 87 (193)
T 2wfh_A 10 CLDTVVRCSNKGLKVLPKGIPRDVTELYLDGNQFT-LVPK-ELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSY 87 (193)
T ss_dssp EETTEEECTTSCCSSCCSCCCTTCCEEECCSSCCC-SCCG-GGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred eCCCEEEcCCCCCCcCCCCCCCCCCEEECCCCcCc-hhHH-HhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCC
Confidence 478889997532 36889999999998 8886 899999999999999999988888999999999999999
Q ss_pred cccCCcCCCCcc--cccceeecccccCcccCCcchhhhccccceeccCCcccC
Q 005693 175 NNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSG 225 (682)
Q Consensus 175 N~l~g~~p~~~~--~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g 225 (682)
|+|++..|..|. ++|++|+|++|+|++..+..|..+++|+.|+|++|.+..
T Consensus 88 N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 88 NRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp SCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 999988887786 899999999999997777789999999999999999974
No 337
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.57 E-value=3.4e-15 Score=167.04 Aligned_cols=148 Identities=27% Similarity=0.378 Sum_probs=105.2
Q ss_pred CeEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCC--CCCCcCCCCCCCcEEeecccccCCcCCCC-cc--cccc
Q 005693 116 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTG--GLPSEITSLPSLRYLYLQHNNFSGKIPSS-FS--PQLV 190 (682)
Q Consensus 116 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g--~~p~~~~~l~~L~~L~L~~N~l~g~~p~~-~~--~~L~ 190 (682)
..++.|++++|.+++.+|. .++++++|++|+|++|++++ .+|..+.++++|++|+|++|++++.+|.. +. ++|+
T Consensus 324 ~~L~~L~Ls~n~l~~~~~~-~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~ 402 (520)
T 2z7x_B 324 SPFLHLDFSNNLLTDTVFE-NCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLL 402 (520)
T ss_dssp CCCCEEECCSSCCCTTTTT-TCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCC
T ss_pred CcccEEEeECCccChhhhh-hhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCC
Confidence 4577788888888776776 67788888888888888875 55666778888888888888887756654 32 6788
Q ss_pred eeecccccCcccCCcchhhhccccceeccCCcccCCCCCC--CCCCCCeEEecccCCCCCCCcc-ccCCCCCC---CCCC
Q 005693 191 VLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSS-LQKFPNSS---FVGN 264 (682)
Q Consensus 191 ~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~l~~L~~l~ls~N~l~g~~p~~-~~~l~~l~---~~~n 264 (682)
+|+|++|++++.+|..+. ++|+.|+|++|+|+ .+|.. .+++|+.|+|++|+++ .+|.. +.++++|+ +.+|
T Consensus 403 ~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N 478 (520)
T 2z7x_B 403 SLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLK-SVPDGIFDRLTSLQKIWLHTN 478 (520)
T ss_dssp EEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSS
T ss_pred EEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCC-ccCHHHhccCCcccEEECcCC
Confidence 888888888777776654 67888888888887 55542 7778888888888887 45554 65555544 4455
Q ss_pred CCCC
Q 005693 265 SLLC 268 (682)
Q Consensus 265 ~~~~ 268 (682)
+..|
T Consensus 479 ~~~c 482 (520)
T 2z7x_B 479 PWDC 482 (520)
T ss_dssp CBCC
T ss_pred CCcc
Confidence 5544
No 338
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.56 E-value=1.5e-15 Score=158.30 Aligned_cols=146 Identities=21% Similarity=0.227 Sum_probs=121.3
Q ss_pred eEEEEEeCCCcccccCCcccc--CCCCCCcEEEccCCCCCCCCC----CcCCCCCCCcEEeecccccCCcCCCCcc--cc
Q 005693 117 RVFGLRLPGIGLVGPIPNNTL--GKLDALEVLSLRSNVLTGGLP----SEITSLPSLRYLYLQHNNFSGKIPSSFS--PQ 188 (682)
Q Consensus 117 ~v~~l~l~~~~l~g~lp~~~~--~~l~~L~~L~L~~N~l~g~~p----~~~~~l~~L~~L~L~~N~l~g~~p~~~~--~~ 188 (682)
++..|+|++|++++.+|. .+ +.+++|++|+|++|++++..| ..+..+++|++|+|++|++++..|..+. ++
T Consensus 92 ~L~~L~l~~n~l~~~~~~-~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~ 170 (310)
T 4glp_A 92 RLKELTLEDLKITGTMPP-LPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPA 170 (310)
T ss_dssp CCCEEEEESCCCBSCCCC-CSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTT
T ss_pred ceeEEEeeCCEeccchhh-hhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCC
Confidence 488999999999999988 56 999999999999999998766 3456899999999999999988888876 79
Q ss_pred cceeecccccCccc--C--CcchhhhccccceeccCCcccCCCCC-----CCCCCCCeEEecccCCCCCCCccccCC---
Q 005693 189 LVVLDLSFNSFTGN--I--PQSIQNLTQLTGLSLQSNNLSGSIPN-----FDIPKLRHLNLSYNGLKGSIPSSLQKF--- 256 (682)
Q Consensus 189 L~~L~ls~N~l~g~--~--p~~~~~l~~L~~L~l~~N~l~g~~p~-----~~l~~L~~l~ls~N~l~g~~p~~~~~l--- 256 (682)
|++|+|++|++++. + +..++++++|++|+|++|+++...+. ..+++|++|+|++|++++..|+.+..+
T Consensus 171 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~ 250 (310)
T 4glp_A 171 LTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWS 250 (310)
T ss_dssp CCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCC
T ss_pred CCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCc
Confidence 99999999998863 2 23457899999999999999743221 167999999999999999888877665
Q ss_pred CCCCCCC
Q 005693 257 PNSSFVG 263 (682)
Q Consensus 257 ~~l~~~~ 263 (682)
++|+.++
T Consensus 251 ~~L~~L~ 257 (310)
T 4glp_A 251 SALNSLN 257 (310)
T ss_dssp TTCCCEE
T ss_pred CcCCEEE
Confidence 4555544
No 339
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.56 E-value=3.5e-15 Score=168.64 Aligned_cols=143 Identities=21% Similarity=0.193 Sum_probs=126.0
Q ss_pred CeEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecccccCCcCCCCcc--cccceee
Q 005693 116 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLD 193 (682)
Q Consensus 116 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~--~~L~~L~ 193 (682)
.+++.|+|++|++++..+ ..|+++++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|. ++|++|+
T Consensus 28 ~~l~~L~Ls~n~l~~~~~-~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGS-YSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 106 (570)
T ss_dssp SSCCEEECCSCCCCEECT-TTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEE
T ss_pred ccccEEEccCCccCccCh-hHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccccc
Confidence 468899999999996444 4799999999999999999988888899999999999999999987778776 7999999
Q ss_pred cccccCcccCCcchhhhccccceeccCCcccC-CCCCC--CCCCCCeEEecccCCCCCCCccccCCCCC
Q 005693 194 LSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSG-SIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNS 259 (682)
Q Consensus 194 ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g-~~p~~--~l~~L~~l~ls~N~l~g~~p~~~~~l~~l 259 (682)
|++|++++..+..|+++++|++|+|++|++++ .+|.. .+++|+.|++++|++++..|..++.+.+|
T Consensus 107 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 175 (570)
T 2z63_A 107 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQM 175 (570)
T ss_dssp CTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTC
T ss_pred ccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhcc
Confidence 99999997766689999999999999999997 45764 79999999999999998878777766665
No 340
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.56 E-value=9e-15 Score=169.13 Aligned_cols=140 Identities=23% Similarity=0.267 Sum_probs=99.0
Q ss_pred cCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecccccCCcCCC--------Ccc--cccceeecccccCc
Q 005693 131 PIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPS--------SFS--PQLVVLDLSFNSFT 200 (682)
Q Consensus 131 ~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~--------~~~--~~L~~L~ls~N~l~ 200 (682)
.+|. .++++++|++|+|++|++++..|..|.++++|++|+|++|++++..+. .+. ++|++|+|++|+|+
T Consensus 471 ~~p~-~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~ 549 (680)
T 1ziw_A 471 SSPS-PFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFD 549 (680)
T ss_dssp CSSC-TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCC
T ss_pred cCCc-ccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCC
Confidence 4454 577777777777777777766666677777888888888877753221 122 67888888888888
Q ss_pred ccCCcchhhhccccceeccCCcccCCCCCC--CCCCCCeEEecccCCCCCCCcc----ccCCCCCCCCCCCCCCCCC
Q 005693 201 GNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSS----LQKFPNSSFVGNSLLCGPP 271 (682)
Q Consensus 201 g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~l~~L~~l~ls~N~l~g~~p~~----~~~l~~l~~~~n~~~~~~~ 271 (682)
...+..|.++++|+.|+|++|+|++.++.. .+++|+.|+|++|++++..|.. +.++..+.+.+|++.|.++
T Consensus 550 ~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~ 626 (680)
T 1ziw_A 550 EIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCE 626 (680)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCC
T ss_pred CCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCc
Confidence 444456888888888888888888655543 6788888888888888766653 3456666677788877654
No 341
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.56 E-value=2.6e-15 Score=150.11 Aligned_cols=144 Identities=19% Similarity=0.235 Sum_probs=121.9
Q ss_pred CeEEEEEeCCCc-ccccCCccccCCCCCCcEEEccC-CCCCCCCCCcCCCCCCCcEEeecccccCCcCCCCcc--cccc-
Q 005693 116 TRVFGLRLPGIG-LVGPIPNNTLGKLDALEVLSLRS-NVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLV- 190 (682)
Q Consensus 116 ~~v~~l~l~~~~-l~g~lp~~~~~~l~~L~~L~L~~-N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~--~~L~- 190 (682)
.++..|++++|+ ++ .+++..|+++++|++|+|++ |++++..+..|.++++|++|+|++|++++ +|. +. ++|+
T Consensus 55 ~~L~~L~l~~n~~l~-~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~ 131 (239)
T 2xwt_C 55 PNISRIYVSIDVTLQ-QLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDI 131 (239)
T ss_dssp TTCCEEEEECCSSCC-EECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCS
T ss_pred CCCcEEeCCCCCCcc-eeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-ccccccccc
Confidence 468899999998 66 67766899999999999999 99997777789999999999999999996 776 54 6677
Q ss_pred --eeecccc-cCcccCCcchhhhcccc-ceeccCCcccCCCCCC--CCCCCCeEEecccC-CCCCCCccccCC-CCCCCC
Q 005693 191 --VLDLSFN-SFTGNIPQSIQNLTQLT-GLSLQSNNLSGSIPNF--DIPKLRHLNLSYNG-LKGSIPSSLQKF-PNSSFV 262 (682)
Q Consensus 191 --~L~ls~N-~l~g~~p~~~~~l~~L~-~L~l~~N~l~g~~p~~--~l~~L~~l~ls~N~-l~g~~p~~~~~l-~~l~~~ 262 (682)
+|+|++| ++++..+..|.++++|+ .|+|++|+++ .+|.. ..++|+.|+|++|+ +++..+..|..+ ++|+.+
T Consensus 132 L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L 210 (239)
T 2xwt_C 132 FFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLL 210 (239)
T ss_dssp EEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEE
T ss_pred ccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCCCCCCEEEcCCCCCcccCCHHHhhccccCCcEE
Confidence 9999999 99988778899999999 9999999999 55543 45789999999995 986666778777 777665
Q ss_pred C
Q 005693 263 G 263 (682)
Q Consensus 263 ~ 263 (682)
+
T Consensus 211 ~ 211 (239)
T 2xwt_C 211 D 211 (239)
T ss_dssp E
T ss_pred E
Confidence 4
No 342
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.55 E-value=3.4e-15 Score=144.69 Aligned_cols=128 Identities=23% Similarity=0.339 Sum_probs=109.0
Q ss_pred CeEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecccccCCcCCCCcc--cccceee
Q 005693 116 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLD 193 (682)
Q Consensus 116 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~--~~L~~L~ 193 (682)
.++..|++++|.++ .+ + .++.+++|++|+|++|++++..|..++++++|++|+|++|++++..|..+. ++|++|+
T Consensus 66 ~~L~~L~l~~n~~~-~~-~-~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~ 142 (197)
T 4ezg_A 66 HNIKDLTINNIHAT-NY-N-PISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSID 142 (197)
T ss_dssp TTCSEEEEESCCCS-CC-G-GGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEE
T ss_pred CCCCEEEccCCCCC-cc-h-hhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEE
Confidence 46889999999765 33 3 699999999999999999988899999999999999999999987777776 7999999
Q ss_pred cccccCcccCCcchhhhccccceeccCCcccCCCCCCCCCCCCeEEecccCCCC
Q 005693 194 LSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNLSYNGLKG 247 (682)
Q Consensus 194 ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~l~~L~~l~ls~N~l~g 247 (682)
|++|++.+.+| .+.++++|+.|+|++|++++..+-..+++|+.|++++|++.+
T Consensus 143 L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~~~~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 143 LSYNGAITDIM-PLKTLPELKSLNIQFDGVHDYRGIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp CCSCTBCCCCG-GGGGCSSCCEEECTTBCCCCCTTGGGCSSCCEEEECBC----
T ss_pred ccCCCCccccH-hhcCCCCCCEEECCCCCCcChHHhccCCCCCEEEeeCcccCC
Confidence 99999433666 799999999999999999975533489999999999999874
No 343
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.55 E-value=6.2e-15 Score=165.96 Aligned_cols=146 Identities=22% Similarity=0.296 Sum_probs=112.1
Q ss_pred CeEEEEEeCCCcccccCCc--cccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecccccCCcCCCCcccccceee
Q 005693 116 TRVFGLRLPGIGLVGPIPN--NTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFSPQLVVLD 193 (682)
Q Consensus 116 ~~v~~l~l~~~~l~g~lp~--~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~L~~L~ 193 (682)
.+++.|+|++|++++ ++. ..++.+++|++|+|++|+|+ .+|..+..+++|++|+|++|+++ .+|..+.++|++|+
T Consensus 361 ~~L~~L~Ls~N~l~~-~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~-~l~~~~~~~L~~L~ 437 (549)
T 2z81_A 361 PSLQTLVLSQNHLRS-MQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIR-VVKTCIPQTLEVLD 437 (549)
T ss_dssp TTCCEEECTTSCCCC-HHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCS-CCCTTSCTTCSEEE
T ss_pred ccCcEEEccCCcccc-cccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCcc-cccchhcCCceEEE
Confidence 356677777777763 221 24777888888888888888 67778888888888888888887 56666667888888
Q ss_pred cccccCcccCCcchhhhccccceeccCCcccCCCCCC-CCCCCCeEEecccCCCCCCCccccCCCCCC---CCCCCCCCC
Q 005693 194 LSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF-DIPKLRHLNLSYNGLKGSIPSSLQKFPNSS---FVGNSLLCG 269 (682)
Q Consensus 194 ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~-~l~~L~~l~ls~N~l~g~~p~~~~~l~~l~---~~~n~~~~~ 269 (682)
|++|+|++.+ .++++|+.|+|++|+|+ .+|.. .+++|+.|+|++|++++.+|..+.++++|+ +.+|+..|.
T Consensus 438 Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 512 (549)
T 2z81_A 438 VSNNNLDSFS----LFLPRLQELYISRNKLK-TLPDASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 512 (549)
T ss_dssp CCSSCCSCCC----CCCTTCCEEECCSSCCS-SCCCGGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCC
T ss_pred CCCCChhhhc----ccCChhcEEECCCCccC-cCCCcccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCC
Confidence 8888888653 47889999999999998 56654 789999999999999988887777666654 556666554
No 344
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.54 E-value=1.1e-14 Score=156.54 Aligned_cols=107 Identities=26% Similarity=0.352 Sum_probs=66.4
Q ss_pred eEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecccccCCcCCCC-cc--cccceee
Q 005693 117 RVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSS-FS--PQLVVLD 193 (682)
Q Consensus 117 ~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~-~~--~~L~~L~ 193 (682)
++..|+|++|++.+ +++..|+++++|++|+|++|++++..|..|+++++|++|+|++|+++ .+|.. |. ++|++|+
T Consensus 70 ~L~~L~L~~n~i~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L~ 147 (390)
T 3o6n_A 70 QVELLNLNDLQIEE-IDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLS 147 (390)
T ss_dssp CCSEEECTTSCCCE-ECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEE
T ss_pred cCcEEECCCCcccc-cChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccC-cCCHHHhcCCCCCcEEE
Confidence 45666666666663 33335666666666666666666655666666666666666666666 33333 32 5666666
Q ss_pred cccccCcccCCcchhhhccccceeccCCcccC
Q 005693 194 LSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSG 225 (682)
Q Consensus 194 ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g 225 (682)
|++|++++..|..|+++++|+.|+|++|++++
T Consensus 148 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 179 (390)
T 3o6n_A 148 MSNNNLERIEDDTFQATTSLQNLQLSSNRLTH 179 (390)
T ss_dssp CCSSCCCBCCTTTTSSCTTCCEEECCSSCCSB
T ss_pred CCCCccCccChhhccCCCCCCEEECCCCcCCc
Confidence 66666666666666666666666666666653
No 345
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.54 E-value=8.5e-15 Score=165.47 Aligned_cols=125 Identities=26% Similarity=0.326 Sum_probs=106.4
Q ss_pred CCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecccccCC--cCCCCcc--cccceeecccccCcccCCc-chhhhcc
Q 005693 138 GKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSG--KIPSSFS--PQLVVLDLSFNSFTGNIPQ-SIQNLTQ 212 (682)
Q Consensus 138 ~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g--~~p~~~~--~~L~~L~ls~N~l~g~~p~-~~~~l~~ 212 (682)
+.+++|++|+|++|++++.+|..+.++++|++|+|++|++++ .+|..+. ++|++|+|++|++++.+|. .+..+++
T Consensus 350 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~ 429 (562)
T 3a79_B 350 PSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAES 429 (562)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTT
T ss_pred cCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCccc
Confidence 788999999999999999899999999999999999999996 3344554 7899999999999985665 5889999
Q ss_pred ccceeccCCcccCCCCCCCCCCCCeEEecccCCCCCCCccccCCCCCCCCC
Q 005693 213 LTGLSLQSNNLSGSIPNFDIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFVG 263 (682)
Q Consensus 213 L~~L~l~~N~l~g~~p~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~l~~~~ 263 (682)
|+.|+|++|++++.+|..-.++|+.|+|++|+++ .+|..+.++++|+.++
T Consensus 430 L~~L~l~~n~l~~~~~~~l~~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~ 479 (562)
T 3a79_B 430 ILVLNLSSNMLTGSVFRCLPPKVKVLDLHNNRIM-SIPKDVTHLQALQELN 479 (562)
T ss_dssp CCEEECCSSCCCGGGGSSCCTTCSEEECCSSCCC-CCCTTTTSSCCCSEEE
T ss_pred CCEEECCCCCCCcchhhhhcCcCCEEECCCCcCc-ccChhhcCCCCCCEEE
Confidence 9999999999998777653379999999999999 7888777777776654
No 346
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.54 E-value=4.2e-15 Score=166.22 Aligned_cols=125 Identities=27% Similarity=0.314 Sum_probs=102.9
Q ss_pred CCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecccccCC--cCCCCcc--cccceeecccccCcccCCc-chhhhcc
Q 005693 138 GKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSG--KIPSSFS--PQLVVLDLSFNSFTGNIPQ-SIQNLTQ 212 (682)
Q Consensus 138 ~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g--~~p~~~~--~~L~~L~ls~N~l~g~~p~-~~~~l~~ 212 (682)
+.+++|++|+|++|++++.+|..++++++|++|+|++|++++ .+|..+. ++|++|+|++|++++.+|. .+..+++
T Consensus 321 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~ 400 (520)
T 2z7x_B 321 SKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKS 400 (520)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTT
T ss_pred hhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCcc
Confidence 678889999999999998888889999999999999999986 5555554 7899999999999986665 4888889
Q ss_pred ccceeccCCcccCCCCCCCCCCCCeEEecccCCCCCCCccccCCCCCCCCC
Q 005693 213 LTGLSLQSNNLSGSIPNFDIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFVG 263 (682)
Q Consensus 213 L~~L~l~~N~l~g~~p~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~l~~~~ 263 (682)
|+.|+|++|++++.+|..-.++|+.|+|++|+++ .+|..+.++++|+.++
T Consensus 401 L~~L~Ls~N~l~~~~~~~l~~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~ 450 (520)
T 2z7x_B 401 LLSLNMSSNILTDTIFRCLPPRIKVLDLHSNKIK-SIPKQVVKLEALQELN 450 (520)
T ss_dssp CCEEECCSSCCCGGGGGSCCTTCCEEECCSSCCC-CCCGGGGGCTTCCEEE
T ss_pred CCEEECcCCCCCcchhhhhcccCCEEECCCCccc-ccchhhhcCCCCCEEE
Confidence 9999999999988777654478999999999998 7888777777776654
No 347
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.53 E-value=1.3e-14 Score=153.86 Aligned_cols=95 Identities=21% Similarity=0.241 Sum_probs=61.1
Q ss_pred CCcceEEecCCC---------CeEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCC-cCCCCCCCcE-Eee
Q 005693 104 QSWVGINCTQDR---------TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPS-EITSLPSLRY-LYL 172 (682)
Q Consensus 104 ~~w~gv~C~~~~---------~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~-~~~~l~~L~~-L~L 172 (682)
|+|..|.|++.. ..++.|+|++|+|+ .||++.|++|++|++|+|++|++.+.+|. .|.++++|+. +++
T Consensus 9 C~~~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~-~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~ 87 (350)
T 4ay9_X 9 CSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLR-VIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIE 87 (350)
T ss_dssp EETTEEEEESTTCCSCCTTCCTTCSEEEEESCCCS-EECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEE
T ss_pred eeCCEEEecCCCCCccCcCcCCCCCEEEccCCcCC-CcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcc
Confidence 489999998532 35889999999998 78887899999999999999998765553 3444444332 333
Q ss_pred cccccCCcCCCCcc--cccceeecccccC
Q 005693 173 QHNNFSGKIPSSFS--PQLVVLDLSFNSF 199 (682)
Q Consensus 173 ~~N~l~g~~p~~~~--~~L~~L~ls~N~l 199 (682)
+.|++++..|..|. ++|++|++++|+|
T Consensus 88 ~~N~l~~l~~~~f~~l~~L~~L~l~~n~l 116 (350)
T 4ay9_X 88 KANNLLYINPEAFQNLPNLQYLLISNTGI 116 (350)
T ss_dssp EETTCCEECTTSBCCCTTCCEEEEEEECC
T ss_pred cCCcccccCchhhhhcccccccccccccc
Confidence 34444433333332 3333333333333
No 348
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.53 E-value=2.9e-15 Score=156.56 Aligned_cols=143 Identities=22% Similarity=0.208 Sum_probs=85.1
Q ss_pred CeEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCC-c---------------CCCCCCCcEEeecccccCC
Q 005693 116 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPS-E---------------ITSLPSLRYLYLQHNNFSG 179 (682)
Q Consensus 116 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~-~---------------~~~l~~L~~L~L~~N~l~g 179 (682)
.++..|+|++|.+++..+ ++.+++|++|+|++|++++..+. . ...+++|+.|+|++|++++
T Consensus 58 ~~L~~L~Ls~n~l~~~~~---~~~l~~L~~L~Ls~n~l~~l~~~~~L~~L~l~~n~l~~~~~~~~~~L~~L~l~~N~l~~ 134 (317)
T 3o53_A 58 TKLELLNLSSNVLYETLD---LESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNISRVSCSRGQGKKNIYLANNKITM 134 (317)
T ss_dssp TTCCEEECTTSCCEEEEE---ETTCTTCCEEECCSSEEEEEEECTTCCEEECCSSCCSEEEECCCSSCEEEECCSSCCCS
T ss_pred CcCCEEECCCCcCCcchh---hhhcCCCCEEECcCCccccccCCCCcCEEECCCCccCCcCccccCCCCEEECCCCCCCC
Confidence 467888888888875442 77888888888888877642211 0 0123445555555555554
Q ss_pred cCCCCcc--cccceeecccccCcccCCcchh-hhccccceeccCCcccCCCCCCCCCCCCeEEecccCCCCCCCccccCC
Q 005693 180 KIPSSFS--PQLVVLDLSFNSFTGNIPQSIQ-NLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNLSYNGLKGSIPSSLQKF 256 (682)
Q Consensus 180 ~~p~~~~--~~L~~L~ls~N~l~g~~p~~~~-~l~~L~~L~l~~N~l~g~~p~~~l~~L~~l~ls~N~l~g~~p~~~~~l 256 (682)
..|..+. ++|++|+|++|++++..|..+. .+++|+.|+|++|++++..+...+++|+.|+|++|++++ +|+.+..+
T Consensus 135 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l 213 (317)
T 3o53_A 135 LRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKGQVVFAKLKTLDLSSNKLAF-MGPEFQSA 213 (317)
T ss_dssp GGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEECCCCCTTCCEEECCSSCCCE-ECGGGGGG
T ss_pred ccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCcccccccccccCCEEECCCCcCCc-chhhhccc
Confidence 4444443 5566666666666665555553 566666666666666654333456667777777777763 44445555
Q ss_pred CCCCCC
Q 005693 257 PNSSFV 262 (682)
Q Consensus 257 ~~l~~~ 262 (682)
++|+.+
T Consensus 214 ~~L~~L 219 (317)
T 3o53_A 214 AGVTWI 219 (317)
T ss_dssp TTCSEE
T ss_pred CcccEE
Confidence 555544
No 349
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.52 E-value=1.7e-15 Score=158.33 Aligned_cols=137 Identities=19% Similarity=0.144 Sum_probs=79.7
Q ss_pred eEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecccccCCcCCCCcc---cccceee
Q 005693 117 RVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS---PQLVVLD 193 (682)
Q Consensus 117 ~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~---~~L~~L~ 193 (682)
.+..|++++|++++..+ ..+++|++|+|++|++++..|..+..+++|++|+|++|++++..|..+. ++|++|+
T Consensus 100 ~L~~L~l~~n~l~~~~~----~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~ 175 (317)
T 3o53_A 100 SIETLHAANNNISRVSC----SRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLN 175 (317)
T ss_dssp TCCEEECCSSCCSEEEE----CCCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEE
T ss_pred CcCEEECCCCccCCcCc----cccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEE
Confidence 34455555555553222 2345666666666666665555666666666666666666665555543 5666666
Q ss_pred cccccCcccCCcchhhhccccceeccCCcccCCCCCC-CCCCCCeEEecccCCCCCCCccccCCCCCC
Q 005693 194 LSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF-DIPKLRHLNLSYNGLKGSIPSSLQKFPNSS 260 (682)
Q Consensus 194 ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~-~l~~L~~l~ls~N~l~g~~p~~~~~l~~l~ 260 (682)
|++|+|++. | ....+++|+.|+|++|+|++.++.+ .+++|+.|+|++|+++ .+|..+..+++|+
T Consensus 176 L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~ 240 (317)
T 3o53_A 176 LQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLE 240 (317)
T ss_dssp CTTSCCCEE-E-CCCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCC
T ss_pred CCCCcCccc-c-cccccccCCEEECCCCcCCcchhhhcccCcccEEECcCCccc-chhhHhhcCCCCC
Confidence 666666644 2 2223666666666666666544443 5566666666666666 4555555444443
No 350
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.51 E-value=2.8e-14 Score=147.13 Aligned_cols=137 Identities=32% Similarity=0.395 Sum_probs=105.1
Q ss_pred CeEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecccccCCcCCCCcc--cccceee
Q 005693 116 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLD 193 (682)
Q Consensus 116 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~--~~L~~L~ 193 (682)
.+++.|+|++|++++ +++ ++++++|++|+|++|++++ +| .+.++++|++|+|++|++++. + .+. ++|++|+
T Consensus 68 ~~L~~L~L~~n~l~~-~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~~-~-~l~~l~~L~~L~ 140 (291)
T 1h6t_A 68 PNVTKLFLNGNKLTD-IKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISDI-N-GLVHLPQLESLY 140 (291)
T ss_dssp TTCCEEECCSSCCCC-CGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCCC-G-GGGGCTTCCEEE
T ss_pred CCCCEEEccCCccCC-Ccc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCCC-h-hhcCCCCCCEEE
Confidence 467788888888875 443 7888888888888888885 44 488888888888888888863 3 333 7888888
Q ss_pred cccccCcccCCcchhhhccccceeccCCcccCCCCCCCCCCCCeEEecccCCCCCCCccccCCCCCCCCC
Q 005693 194 LSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFVG 263 (682)
Q Consensus 194 ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~l~~~~ 263 (682)
|++|++++. ..++++++|+.|+|++|++++..|-..+++|+.|+|++|++++ +| .+.++++|..++
T Consensus 141 l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~l~~l~~L~~L~L~~N~i~~-l~-~l~~l~~L~~L~ 206 (291)
T 1h6t_A 141 LGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLE 206 (291)
T ss_dssp CCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEE
T ss_pred ccCCcCCcc--hhhccCCCCCEEEccCCccccchhhcCCCccCEEECCCCcCCC-Ch-hhccCCCCCEEE
Confidence 888888865 5788888888888888888877664578888888888888885 44 366666666553
No 351
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.51 E-value=1.5e-15 Score=176.14 Aligned_cols=137 Identities=27% Similarity=0.308 Sum_probs=119.1
Q ss_pred CCeEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecccccCCcCCCCcc--ccccee
Q 005693 115 RTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVL 192 (682)
Q Consensus 115 ~~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~--~~L~~L 192 (682)
...+..|+|++|++. .+|. .+.++++|++|+|++|.|+ .+|..|++|++|++|+|++|+|+ .+|..|. ++|++|
T Consensus 223 l~~L~~L~Ls~n~l~-~l~~-~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L 298 (727)
T 4b8c_D 223 DQLWHALDLSNLQIF-NISA-NIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYF 298 (727)
T ss_dssp CCCCCEEECTTSCCS-CCCG-GGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEE
T ss_pred CCCCcEEECCCCCCC-CCCh-hhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEE
Confidence 357889999999998 8998 5779999999999999999 99999999999999999999999 8899987 799999
Q ss_pred ecccccCcccCCcchhhhccccceeccCCcccCCCCCC--CC-CCCCeEEecccCCCCCCCccccCC
Q 005693 193 DLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DI-PKLRHLNLSYNGLKGSIPSSLQKF 256 (682)
Q Consensus 193 ~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~l-~~L~~l~ls~N~l~g~~p~~~~~l 256 (682)
+|++|.|+ .+|..|++|++|+.|+|++|+|+|.+|.. .+ ..+..|+|++|.++|.+|..+..+
T Consensus 299 ~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~l~~l 364 (727)
T 4b8c_D 299 YFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHERRFI 364 (727)
T ss_dssp ECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC----
T ss_pred ECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcccccee
Confidence 99999998 88999999999999999999999988864 11 123357899999999999876544
No 352
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.50 E-value=2.3e-14 Score=161.33 Aligned_cols=117 Identities=25% Similarity=0.263 Sum_probs=97.9
Q ss_pred EEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecccccCCcCCCCcc--cccceeecc
Q 005693 118 VFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLS 195 (682)
Q Consensus 118 v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~--~~L~~L~ls 195 (682)
+..|+|++|++++ +|. +++|++|+.|+|++|+|+ .+|..|++|++|+.|+|++|+|++ +| .+. ++|++|+|+
T Consensus 443 L~~L~Ls~n~l~~-lp~--~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls 516 (567)
T 1dce_A 443 VRVLHLAHKDLTV-LCH--LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLC 516 (567)
T ss_dssp CSEEECTTSCCSS-CCC--GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECC
T ss_pred ceEEEecCCCCCC-CcC--ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECC
Confidence 5668899998885 774 888999999999999998 888889999999999999999986 66 555 789999999
Q ss_pred cccCcccC-CcchhhhccccceeccCCcccCCCCCC-----CCCCCCeEEe
Q 005693 196 FNSFTGNI-PQSIQNLTQLTGLSLQSNNLSGSIPNF-----DIPKLRHLNL 240 (682)
Q Consensus 196 ~N~l~g~~-p~~~~~l~~L~~L~l~~N~l~g~~p~~-----~l~~L~~l~l 240 (682)
+|+|++.. |..|++|++|+.|+|++|+|++.+|.. .+++|+.|++
T Consensus 517 ~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 517 NNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp SSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred CCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 99998876 888999999999999999998877753 4788888864
No 353
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.50 E-value=1.1e-16 Score=155.39 Aligned_cols=143 Identities=25% Similarity=0.331 Sum_probs=119.6
Q ss_pred eEEEEEeCCCcccccCCc-----cccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecccccCCcCCCCcc--ccc
Q 005693 117 RVFGLRLPGIGLVGPIPN-----NTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQL 189 (682)
Q Consensus 117 ~v~~l~l~~~~l~g~lp~-----~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~--~~L 189 (682)
+++.++++.+++.|.+|. ..++.+++|++|+|++|++++ +| .+.++++|++|+|++|+++ .+|..+. ++|
T Consensus 19 ~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L 95 (198)
T 1ds9_A 19 SVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTL 95 (198)
T ss_dssp CCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHC
T ss_pred cccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcC
Confidence 455566666666666664 258999999999999999996 77 8999999999999999999 6787655 799
Q ss_pred ceeecccccCcccCCcchhhhccccceeccCCcccCCCC--C-CCCCCCCeEEecccCCCCCCCcc----------ccCC
Q 005693 190 VVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIP--N-FDIPKLRHLNLSYNGLKGSIPSS----------LQKF 256 (682)
Q Consensus 190 ~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p--~-~~l~~L~~l~ls~N~l~g~~p~~----------~~~l 256 (682)
++|+|++|+|++ +| .+.++++|+.|+|++|++++..+ . ..+++|+.|++++|.+++.+|.. +.++
T Consensus 96 ~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l 173 (198)
T 1ds9_A 96 EELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRL 173 (198)
T ss_dssp SEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHC
T ss_pred CEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhC
Confidence 999999999996 55 79999999999999999996433 2 38999999999999998876653 7788
Q ss_pred CCCCCCCC
Q 005693 257 PNSSFVGN 264 (682)
Q Consensus 257 ~~l~~~~n 264 (682)
++|+.++.
T Consensus 174 ~~L~~Ld~ 181 (198)
T 1ds9_A 174 PNLKKLDG 181 (198)
T ss_dssp SSCSEECC
T ss_pred CCcEEECC
Confidence 88888763
No 354
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.50 E-value=4e-14 Score=145.99 Aligned_cols=136 Identities=22% Similarity=0.321 Sum_probs=116.5
Q ss_pred CeEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecccccCCcCCCCcc--cccceee
Q 005693 116 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLD 193 (682)
Q Consensus 116 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~--~~L~~L~ 193 (682)
.+++.|++++|++. .++ .++.+++|++|+|++|++++..| +.++++|++|+|++|++++ +|. +. ++|++|+
T Consensus 46 ~~L~~L~l~~~~i~-~~~--~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~ 118 (291)
T 1h6t_A 46 NSIDQIIANNSDIK-SVQ--GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LSS-LKDLKKLKSLS 118 (291)
T ss_dssp HTCCEEECTTSCCC-CCT--TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GGG-GTTCTTCCEEE
T ss_pred CcccEEEccCCCcc-cCh--hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Chh-hccCCCCCEEE
Confidence 35888999999998 455 48999999999999999996555 9999999999999999996 343 44 7999999
Q ss_pred cccccCcccCCcchhhhccccceeccCCcccCCCCCC-CCCCCCeEEecccCCCCCCCccccCCCCCCCCC
Q 005693 194 LSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF-DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFVG 263 (682)
Q Consensus 194 ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~-~l~~L~~l~ls~N~l~g~~p~~~~~l~~l~~~~ 263 (682)
|++|++++. ..+..+++|+.|+|++|++++. +.. .+++|+.|+|++|++++..| +..+++|+.++
T Consensus 119 L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~ 184 (291)
T 1h6t_A 119 LEHNGISDI--NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLY 184 (291)
T ss_dssp CTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEE
T ss_pred CCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc-hhhccCCCCCEEEccCCccccchh--hcCCCccCEEE
Confidence 999999974 5799999999999999999976 443 89999999999999997555 77787777654
No 355
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.49 E-value=4.8e-14 Score=146.69 Aligned_cols=137 Identities=27% Similarity=0.374 Sum_probs=102.3
Q ss_pred CeEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecccccCCcCCCCcc--cccceee
Q 005693 116 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLD 193 (682)
Q Consensus 116 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~--~~L~~L~ 193 (682)
.++..|+|++|++++ +++ +..+++|++|+|++|++++ +| .+.++++|++|+|++|++++. |. +. ++|++|+
T Consensus 63 ~~L~~L~L~~n~i~~-~~~--~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~L~ 135 (308)
T 1h6u_A 63 NNLIGLELKDNQITD-LAP--LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDLTSTQITDV-TP-LAGLSNLQVLY 135 (308)
T ss_dssp TTCCEEECCSSCCCC-CGG--GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTTSCCCCC-GG-GTTCTTCCEEE
T ss_pred CCCCEEEccCCcCCC-Chh--HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEECCCCCCCCc-hh-hcCCCCCCEEE
Confidence 467888888888874 544 7888888888888888885 34 688888888888888888864 32 33 7888888
Q ss_pred cccccCcccCCcchhhhccccceeccCCcccCCCCCCCCCCCCeEEecccCCCCCCCccccCCCCCCCCC
Q 005693 194 LSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFVG 263 (682)
Q Consensus 194 ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~l~~~~ 263 (682)
|++|++++..+ ++++++|+.|+|++|++++..+-..+++|+.|+|++|++++..+ +..+++|+.++
T Consensus 136 l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~ 201 (308)
T 1h6u_A 136 LDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDISP--LASLPNLIEVH 201 (308)
T ss_dssp CCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEE
T ss_pred CCCCccCcCcc--ccCCCCccEEEccCCcCCCChhhcCCCCCCEEECCCCccCcChh--hcCCCCCCEEE
Confidence 88888886544 88888888888888888875554478888888888888885433 55566555443
No 356
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.49 E-value=3.7e-14 Score=147.51 Aligned_cols=139 Identities=26% Similarity=0.389 Sum_probs=117.5
Q ss_pred CeEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecccccCCcCCCCcccccceeecc
Q 005693 116 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFSPQLVVLDLS 195 (682)
Q Consensus 116 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~L~~L~ls 195 (682)
.++..|+|++|.+++ ++ .++.+++|++|+|++|++++ +| .+.++++|++|+|++|++++..+-.-.++|++|+|+
T Consensus 85 ~~L~~L~L~~n~l~~-~~--~~~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~ 159 (308)
T 1h6u_A 85 TKITELELSGNPLKN-VS--AIAGLQSIKTLDLTSTQITD-VT-PLAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIG 159 (308)
T ss_dssp CSCCEEECCSCCCSC-CG--GGTTCTTCCEEECTTSCCCC-CG-GGTTCTTCCEEECCSSCCCCCGGGGGCTTCCEEECC
T ss_pred CCCCEEEccCCcCCC-ch--hhcCCCCCCEEECCCCCCCC-ch-hhcCCCCCCEEECCCCccCcCccccCCCCccEEEcc
Confidence 578999999999985 54 59999999999999999996 44 399999999999999999976552222799999999
Q ss_pred cccCcccCCcchhhhccccceeccCCcccCCCCCCCCCCCCeEEecccCCCCCCCccccCCCCCCCCC
Q 005693 196 FNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFVG 263 (682)
Q Consensus 196 ~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~l~~~~ 263 (682)
+|++++..+ +.++++|+.|+|++|++++..+-..+++|+.|+|++|++++..| +.++++|..++
T Consensus 160 ~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~ 223 (308)
T 1h6u_A 160 NAQVSDLTP--LANLSKLTTLKADDNKISDISPLASLPNLIEVHLKNNQISDVSP--LANTSNLFIVT 223 (308)
T ss_dssp SSCCCCCGG--GTTCTTCCEEECCSSCCCCCGGGGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEE
T ss_pred CCcCCCChh--hcCCCCCCEEECCCCccCcChhhcCCCCCCEEEccCCccCcccc--ccCCCCCCEEE
Confidence 999996544 99999999999999999987665589999999999999996543 77777776553
No 357
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.48 E-value=4.5e-14 Score=149.79 Aligned_cols=149 Identities=23% Similarity=0.250 Sum_probs=124.2
Q ss_pred ceEEecCCCCeEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecccccCCcCCCCcc
Q 005693 107 VGINCTQDRTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS 186 (682)
Q Consensus 107 ~gv~C~~~~~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~ 186 (682)
..+.|... .+ .++++++++ .+|. .+. ++|++|+|++|++++..+..|.++++|++|+|++|++++..|..|.
T Consensus 26 ~~~~C~~~--~~--c~~~~~~l~-~iP~-~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 97 (353)
T 2z80_A 26 ASLSCDRN--GI--CKGSSGSLN-SIPS-GLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFS 97 (353)
T ss_dssp -CCEECTT--SE--EECCSTTCS-SCCT-TCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTT
T ss_pred cCCCCCCC--eE--eeCCCCCcc-cccc-ccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcC
Confidence 45677653 23 789999998 7887 343 5899999999999976667899999999999999999988888787
Q ss_pred --cccceeecccccCcccCCcchhhhccccceeccCCcccCCCC-C-C-CCCCCCeEEecccC-CCCCCCccccCCCCCC
Q 005693 187 --PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIP-N-F-DIPKLRHLNLSYNG-LKGSIPSSLQKFPNSS 260 (682)
Q Consensus 187 --~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p-~-~-~l~~L~~l~ls~N~-l~g~~p~~~~~l~~l~ 260 (682)
++|++|+|++|+|++..+..|+++++|++|+|++|++++..+ . . .+++|+.|++++|+ +++..|..+.++++|+
T Consensus 98 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~ 177 (353)
T 2z80_A 98 SLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLE 177 (353)
T ss_dssp TCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEE
T ss_pred CCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCC
Confidence 799999999999997666669999999999999999996554 2 2 89999999999995 7766677888888877
Q ss_pred CCC
Q 005693 261 FVG 263 (682)
Q Consensus 261 ~~~ 263 (682)
.++
T Consensus 178 ~L~ 180 (353)
T 2z80_A 178 ELE 180 (353)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 358
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.48 E-value=6.1e-14 Score=133.29 Aligned_cols=112 Identities=27% Similarity=0.313 Sum_probs=99.6
Q ss_pred CeEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecccccCCcCCCCcc--cccceee
Q 005693 116 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLD 193 (682)
Q Consensus 116 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~--~~L~~L~ 193 (682)
.+++.|++++|++++ +|+..++.+++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..+. ++|++|+
T Consensus 28 ~~l~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ 106 (177)
T 2o6r_A 28 SSATRLELESNKLQS-LPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELA 106 (177)
T ss_dssp TTCSEEECCSSCCCC-CCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCcEEEeCCCcccE-eCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEE
Confidence 468899999999984 6655789999999999999999977777789999999999999999977766665 7999999
Q ss_pred cccccCcccCCcchhhhccccceeccCCcccCCCC
Q 005693 194 LSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIP 228 (682)
Q Consensus 194 ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p 228 (682)
|++|+|++..+..+.++++|+.|+|++|.+++..|
T Consensus 107 l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 107 LDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 99999997777778999999999999999998665
No 359
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.48 E-value=1.2e-13 Score=130.55 Aligned_cols=105 Identities=25% Similarity=0.263 Sum_probs=81.8
Q ss_pred EEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecccccCCcCCCCcc--cccceeeccc
Q 005693 119 FGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSF 196 (682)
Q Consensus 119 ~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~--~~L~~L~ls~ 196 (682)
+.+++++|+++ .+|. .+ .++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|. ++|++|+|++
T Consensus 12 ~~l~~s~n~l~-~ip~-~~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 12 TTVDCSGKSLA-SVPT-GI--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TEEECTTSCCS-SCCS-CC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCc-cC--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 35777788887 5886 34 38899999999999988888899999999999999999866555554 6788888888
Q ss_pred ccCcccCCcchhhhccccceeccCCcccCCC
Q 005693 197 NSFTGNIPQSIQNLTQLTGLSLQSNNLSGSI 227 (682)
Q Consensus 197 N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~ 227 (682)
|+|++..|..|.++++|+.|+|++|.++...
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c 118 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCAC 118 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTTB
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCCc
Confidence 8888666667777777777777777776543
No 360
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.47 E-value=7.5e-14 Score=158.15 Aligned_cols=137 Identities=32% Similarity=0.382 Sum_probs=116.8
Q ss_pred CeEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecccccCCcCCCCcc--cccceee
Q 005693 116 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLD 193 (682)
Q Consensus 116 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~--~~L~~L~ 193 (682)
.++..|+|++|.+.+ +++ ++.|++|+.|+|++|.|++ +| .+..|++|+.|+|++|+|++. | .+. ++|+.|+
T Consensus 65 ~~L~~L~Ls~N~l~~-~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~l-~-~l~~l~~L~~L~ 137 (605)
T 1m9s_A 65 PNVTKLFLNGNKLTD-IKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISDI-N-GLVHLPQLESLY 137 (605)
T ss_dssp TTCCEEECTTSCCCC-CGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCCC-G-GGGGCTTCSEEE
T ss_pred CCCCEEEeeCCCCCC-Chh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCCC-c-cccCCCccCEEE
Confidence 468899999999985 444 8999999999999999985 44 799999999999999999963 3 343 7999999
Q ss_pred cccccCcccCCcchhhhccccceeccCCcccCCCCCCCCCCCCeEEecccCCCCCCCccccCCCCCCCCC
Q 005693 194 LSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFVG 263 (682)
Q Consensus 194 ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~l~~~~ 263 (682)
|++|+|++. ..+..|++|+.|+|++|+|++.+|-..+++|+.|+|++|+|++. | .+..+++|..++
T Consensus 138 Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~l~~l~~L~~L~Ls~N~i~~l-~-~l~~l~~L~~L~ 203 (605)
T 1m9s_A 138 LGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLE 203 (605)
T ss_dssp CCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEE
T ss_pred CCCCccCCc--hhhcccCCCCEEECcCCcCCCchhhccCCCCCEEECcCCCCCCC-h-HHccCCCCCEEE
Confidence 999999975 68999999999999999999988855899999999999999964 3 577777776554
No 361
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.47 E-value=1.4e-13 Score=130.07 Aligned_cols=104 Identities=29% Similarity=0.334 Sum_probs=93.1
Q ss_pred CcEEEccCCCCCCCCCCcCCCCCCCcEEeecccccCCcCCCCcc--cccceeecccccCcccCCcchhhhccccceeccC
Q 005693 143 LEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQS 220 (682)
Q Consensus 143 L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~--~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~ 220 (682)
.+.|++++|+|+ .+|..+. ++|++|+|++|+|++..|..|. ++|++|+|++|+|++..|..|.++++|+.|+|++
T Consensus 11 ~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 578999999999 6887774 8999999999999988888886 7999999999999988888899999999999999
Q ss_pred CcccCCCCCC--CCCCCCeEEecccCCCCCC
Q 005693 221 NNLSGSIPNF--DIPKLRHLNLSYNGLKGSI 249 (682)
Q Consensus 221 N~l~g~~p~~--~l~~L~~l~ls~N~l~g~~ 249 (682)
|+|++..+.. .+++|+.|+|++|.+++..
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c 118 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCAC 118 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTTB
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCCc
Confidence 9999877753 8999999999999998543
No 362
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.46 E-value=1e-13 Score=155.42 Aligned_cols=117 Identities=28% Similarity=0.427 Sum_probs=76.5
Q ss_pred eEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecccccCCcCCCCcccccceeeccc
Q 005693 117 RVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFSPQLVVLDLSF 196 (682)
Q Consensus 117 ~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~L~~L~ls~ 196 (682)
+++.|+|++|+++ .+| +.+++|++|+|++|+|++ +|. +.+ +|++|+|++|+|++ +|. ..++|++|+|++
T Consensus 81 ~L~~L~Ls~N~l~-~ip----~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~-~l~~L~~L~Ls~ 149 (571)
T 3cvr_A 81 QITVLEITQNALI-SLP----ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE-LPALLEYINADN 149 (571)
T ss_dssp TCSEEECCSSCCS-CCC----CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC-CCTTCCEEECCS
T ss_pred CCCEEECcCCCCc-ccc----cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC-cCccccEEeCCC
Confidence 4677777777777 566 345777777777777775 665 554 77777777777775 555 446677777777
Q ss_pred ccCcccCCcchhhhccccceeccCCcccCCCCCCCCCCCCeEEecccCCCCCCCc
Q 005693 197 NSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNLSYNGLKGSIPS 251 (682)
Q Consensus 197 N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~l~~L~~l~ls~N~l~g~~p~ 251 (682)
|+|++ +|. .+++|+.|+|++|+|++ +|.+. ++|+.|+|++|+|+ .+|.
T Consensus 150 N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~l~-~~L~~L~Ls~N~L~-~lp~ 197 (571)
T 3cvr_A 150 NQLTM-LPE---LPTSLEVLSVRNNQLTF-LPELP-ESLEALDVSTNLLE-SLPA 197 (571)
T ss_dssp SCCSC-CCC---CCTTCCEEECCSSCCSC-CCCCC-TTCCEEECCSSCCS-SCCC
T ss_pred CccCc-CCC---cCCCcCEEECCCCCCCC-cchhh-CCCCEEECcCCCCC-chhh
Confidence 77765 554 45666777777777665 44333 66666666666666 4555
No 363
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.46 E-value=5.8e-14 Score=133.34 Aligned_cols=124 Identities=23% Similarity=0.286 Sum_probs=82.9
Q ss_pred eEEEEEeCCCcccccCCccccCCCC-CCcEEEccCCCCCCCCCCcCCCCCCCcEEeecccccCCcCCCCcc--cccceee
Q 005693 117 RVFGLRLPGIGLVGPIPNNTLGKLD-ALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLD 193 (682)
Q Consensus 117 ~v~~l~l~~~~l~g~lp~~~~~~l~-~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~--~~L~~L~ 193 (682)
.++.|++++|+++ .+|. +..+. +|++|+|++|.|++. +.|.++++|++|+|++|+|++..|..+. ++|++|+
T Consensus 20 ~L~~L~l~~n~l~-~i~~--~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 94 (176)
T 1a9n_A 20 RDRELDLRGYKIP-VIEN--LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELI 94 (176)
T ss_dssp SCEEEECTTSCCC-SCCC--GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEE
T ss_pred CceEEEeeCCCCc-hhHH--hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEE
Confidence 5677777777777 4543 44444 777777777777754 5677777777777777777744333223 6777777
Q ss_pred cccccCcccCCc--chhhhccccceeccCCcccCCCCC----C-CCCCCCeEEecccCCC
Q 005693 194 LSFNSFTGNIPQ--SIQNLTQLTGLSLQSNNLSGSIPN----F-DIPKLRHLNLSYNGLK 246 (682)
Q Consensus 194 ls~N~l~g~~p~--~~~~l~~L~~L~l~~N~l~g~~p~----~-~l~~L~~l~ls~N~l~ 246 (682)
|++|+|+ .+|. .+..+++|+.|+|++|.++...+. . .+++|+.||+++|.+.
T Consensus 95 L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 95 LTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCCcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 7777775 4554 677777777777777777743331 2 6677777777777654
No 364
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.45 E-value=2.2e-13 Score=129.18 Aligned_cols=104 Identities=25% Similarity=0.284 Sum_probs=81.2
Q ss_pred EEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecccccCCcCCCCcc--cccceeeccc
Q 005693 119 FGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSF 196 (682)
Q Consensus 119 ~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~--~~L~~L~ls~ 196 (682)
+.++++++++. .+|. .+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|. ++|++|+|++
T Consensus 15 ~~l~~~~n~l~-~iP~-~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPA-GIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SEEECCSSCCS-SCCS-CCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred cEEEeCCCCCC-ccCC-CcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 46888999886 7887 343 8899999999999988888899999999999999999865444443 6788888888
Q ss_pred ccCcccCCcchhhhccccceeccCCcccCC
Q 005693 197 NSFTGNIPQSIQNLTQLTGLSLQSNNLSGS 226 (682)
Q Consensus 197 N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ 226 (682)
|+|++..+..|.++++|+.|+|++|.+...
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~ 120 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWDCE 120 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBCTT
T ss_pred CccceeCHHHhccccCCCEEEeCCCCcccc
Confidence 888865555677777777777777777643
No 365
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.45 E-value=2.8e-13 Score=128.38 Aligned_cols=104 Identities=25% Similarity=0.319 Sum_probs=92.1
Q ss_pred cEEEccCCCCCCCCCCcCCCCCCCcEEeecccccCCcCCCCcc--cccceeecccccCcccCCcchhhhccccceeccCC
Q 005693 144 EVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSN 221 (682)
Q Consensus 144 ~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~--~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N 221 (682)
+.+++++|+++ .+|..+. ++|++|+|++|+|++..|..|. ++|++|+|++|+|++..+..|.++++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 78999999997 8888775 8999999999999988888886 79999999999999877777899999999999999
Q ss_pred cccCCCCC-C-CCCCCCeEEecccCCCCCCCc
Q 005693 222 NLSGSIPN-F-DIPKLRHLNLSYNGLKGSIPS 251 (682)
Q Consensus 222 ~l~g~~p~-~-~l~~L~~l~ls~N~l~g~~p~ 251 (682)
+|++.++. + .+++|+.|+|++|.+.. .+.
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c-~~~ 122 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDC-ECR 122 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCT-TBG
T ss_pred ccceeCHHHhccccCCCEEEeCCCCccc-ccc
Confidence 99987775 3 79999999999999984 443
No 366
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.44 E-value=1.9e-14 Score=158.01 Aligned_cols=134 Identities=22% Similarity=0.232 Sum_probs=68.7
Q ss_pred CeEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCC-------------cEEeecccccCCcCC
Q 005693 116 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSL-------------RYLYLQHNNFSGKIP 182 (682)
Q Consensus 116 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L-------------~~L~L~~N~l~g~~p 182 (682)
.++..|++++|++ |.+|+ .+++|++|++|+|++|+++|.+|..++++++| ++|++++|++++ +|
T Consensus 11 ~~L~~L~l~~n~l-~~iP~-~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-lp 87 (454)
T 1jl5_A 11 TFLQEPLRHSSNL-TEMPV-EAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-LP 87 (454)
T ss_dssp -------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-CC
T ss_pred ccchhhhcccCch-hhCCh-hHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-CC
Confidence 4677888888888 78887 68889999999998888888888888887764 777888777775 34
Q ss_pred CCcccccceeecccccCcccCCcchhhhccccceeccCCcccCCCCCCCCCCCCeEEecccCCCCCCCccccCCCCCCC
Q 005693 183 SSFSPQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNLSYNGLKGSIPSSLQKFPNSSF 261 (682)
Q Consensus 183 ~~~~~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~l~~ 261 (682)
. +.++|++|+|++|++++ +|..+ ++|+.|++++|++++. |.. .++|++|++++|++++ +| .++++++|+.
T Consensus 88 ~-~~~~L~~L~l~~n~l~~-lp~~~---~~L~~L~l~~n~l~~l-~~~-~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~ 157 (454)
T 1jl5_A 88 E-LPPHLESLVASCNSLTE-LPELP---QSLKSLLVDNNNLKAL-SDL-PPLLEYLGVSNNQLEK-LP-ELQNSSFLKI 157 (454)
T ss_dssp S-CCTTCSEEECCSSCCSS-CCCCC---TTCCEEECCSSCCSCC-CSC-CTTCCEEECCSSCCSS-CC-CCTTCTTCCE
T ss_pred C-CcCCCCEEEccCCcCCc-ccccc---CCCcEEECCCCccCcc-cCC-CCCCCEEECcCCCCCC-Cc-ccCCCCCCCE
Confidence 3 33567777777777775 55432 4555555555555531 111 1345555555555553 44 3444444443
No 367
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.43 E-value=1.5e-13 Score=155.61 Aligned_cols=136 Identities=23% Similarity=0.327 Sum_probs=116.7
Q ss_pred CeEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecccccCCcCCCCcc--cccceee
Q 005693 116 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLD 193 (682)
Q Consensus 116 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~--~~L~~L~ 193 (682)
.++..|+|++|++. .+| .++.|++|+.|+|++|+|++..| +.+|++|+.|+|++|+|++ +| .+. ++|++|+
T Consensus 43 ~~L~~L~l~~n~i~-~l~--~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~ 115 (605)
T 1m9s_A 43 NSIDQIIANNSDIK-SVQ--GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLS 115 (605)
T ss_dssp TTCCCCBCTTCCCC-CCT--TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEE
T ss_pred CCCCEEECcCCCCC-CCh--HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEE
Confidence 35777899999987 565 48999999999999999997655 9999999999999999996 34 444 7999999
Q ss_pred cccccCcccCCcchhhhccccceeccCCcccCCCCCC-CCCCCCeEEecccCCCCCCCccccCCCCCCCCC
Q 005693 194 LSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF-DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFVG 263 (682)
Q Consensus 194 ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~-~l~~L~~l~ls~N~l~g~~p~~~~~l~~l~~~~ 263 (682)
|++|+|++. +.+..|++|+.|+|++|+|++. +.. .+++|+.|+|++|+|++..| +..+++|..++
T Consensus 116 Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l-~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~ 181 (605)
T 1m9s_A 116 LEHNGISDI--NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLY 181 (605)
T ss_dssp CTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC-GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEE
T ss_pred ecCCCCCCC--ccccCCCccCEEECCCCccCCc-hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEE
Confidence 999999963 5699999999999999999986 443 89999999999999997766 77777776654
No 368
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.43 E-value=2.1e-13 Score=150.39 Aligned_cols=139 Identities=32% Similarity=0.354 Sum_probs=99.7
Q ss_pred CeEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecccccCCcCCCCcccccceeecc
Q 005693 116 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFSPQLVVLDLS 195 (682)
Q Consensus 116 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~L~~L~ls 195 (682)
.++..|++++|++++ ++ .+..+++|+.|+|++|.+++..| +.++++|+.|+|++|++++..|-.-.++|++|+|+
T Consensus 221 ~~L~~L~l~~n~l~~-~~--~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~L~ 295 (466)
T 1o6v_A 221 TNLDELSLNGNQLKD-IG--TLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPLAGLTALTNLELN 295 (466)
T ss_dssp TTCCEEECCSSCCCC-CG--GGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGGGTTCTTCSEEECC
T ss_pred CCCCEEECCCCCccc-ch--hhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCccccccCCCccCeEEcC
Confidence 357778888888774 33 47788888888888888876554 77888888888888888765442222678888888
Q ss_pred cccCcccCCcchhhhccccceeccCCcccCCCCCCCCCCCCeEEecccCCCCCCCccccCCCCCCCCC
Q 005693 196 FNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFVG 263 (682)
Q Consensus 196 ~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~l~~~~ 263 (682)
+|++++..| ++.+++|+.|+|++|++++..|...+++|+.|++++|++++. +.+.++++|+.++
T Consensus 296 ~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~ 359 (466)
T 1o6v_A 296 ENQLEDISP--ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLS 359 (466)
T ss_dssp SSCCSCCGG--GGGCTTCSEEECCSSCCSCCGGGGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEE
T ss_pred CCcccCchh--hcCCCCCCEEECcCCcCCCchhhccCccCCEeECCCCccCCc--hhhccCCCCCEEe
Confidence 888876544 777788888888888887776655777788888888877764 3566666665543
No 369
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.42 E-value=1.2e-13 Score=131.17 Aligned_cols=123 Identities=17% Similarity=0.149 Sum_probs=103.3
Q ss_pred ccCCCCCCcEEEccCCCCCCCCCCcCCCCC-CCcEEeecccccCCcCCCCcc--cccceeecccccCcccCCcchhhhcc
Q 005693 136 TLGKLDALEVLSLRSNVLTGGLPSEITSLP-SLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQ 212 (682)
Q Consensus 136 ~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~-~L~~L~L~~N~l~g~~p~~~~--~~L~~L~ls~N~l~g~~p~~~~~l~~ 212 (682)
.+.++.+|+.|+|++|+++ .+|. +..+. +|++|+|++|+|++. ..+. ++|++|+|++|+|++..|..+..+++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 89 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPD 89 (176)
T ss_dssp EEECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred hcCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCC
Confidence 4778999999999999999 5564 66655 999999999999975 4554 79999999999999765566699999
Q ss_pred ccceeccCCcccCCCCC---C-CCCCCCeEEecccCCCCCCCcc----ccCCCCCCCCCC
Q 005693 213 LTGLSLQSNNLSGSIPN---F-DIPKLRHLNLSYNGLKGSIPSS----LQKFPNSSFVGN 264 (682)
Q Consensus 213 L~~L~l~~N~l~g~~p~---~-~l~~L~~l~ls~N~l~g~~p~~----~~~l~~l~~~~n 264 (682)
|+.|+|++|+|+. +|. . .+++|+.|++++|.++ .+|.. +..+++|..++-
T Consensus 90 L~~L~L~~N~i~~-~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~ 147 (176)
T 1a9n_A 90 LTELILTNNSLVE-LGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDF 147 (176)
T ss_dssp CCEEECCSCCCCC-GGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETT
T ss_pred CCEEECCCCcCCc-chhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCC
Confidence 9999999999974 443 2 8899999999999998 56764 788888887763
No 370
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.42 E-value=1.3e-13 Score=155.26 Aligned_cols=116 Identities=29% Similarity=0.323 Sum_probs=90.0
Q ss_pred CCcEEEccCCCCCCCCCCcCCCCCCCcEEeecccccCCcCCCCcc--cccceeecccccCcccCCcchhhhccccceecc
Q 005693 142 ALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQ 219 (682)
Q Consensus 142 ~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~--~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~ 219 (682)
.|+.|+|++|+|++ +|. |+++++|+.|+|++|+|+ .+|..++ ++|++|+|++|+|++ +| .|++|++|+.|+|+
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls 516 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLC 516 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECC
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECC
Confidence 46788888888885 675 888888888888888888 7787776 788888888888886 66 78888888888888
Q ss_pred CCcccCCC-CCC--CCCCCCeEEecccCCCCCCCcc---ccCCCCCCCC
Q 005693 220 SNNLSGSI-PNF--DIPKLRHLNLSYNGLKGSIPSS---LQKFPNSSFV 262 (682)
Q Consensus 220 ~N~l~g~~-p~~--~l~~L~~l~ls~N~l~g~~p~~---~~~l~~l~~~ 262 (682)
+|+|++.+ |.. .+++|+.|+|++|+|++.+|.. +..+++|..+
T Consensus 517 ~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L 565 (567)
T 1dce_A 517 NNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSI 565 (567)
T ss_dssp SSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEE
T ss_pred CCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCcc
Confidence 88888875 553 7888888888888888665432 2235555544
No 371
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.41 E-value=4.7e-13 Score=146.98 Aligned_cols=124 Identities=23% Similarity=0.163 Sum_probs=80.8
Q ss_pred CeEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecccccCCcCCCCcccccceeecc
Q 005693 116 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFSPQLVVLDLS 195 (682)
Q Consensus 116 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~L~~L~ls 195 (682)
.++..|++++|+..+.++ ++.+++|++|+|++|++++ +| ++.+++|+.|+|++|++++. +-.-.++|++|+|+
T Consensus 148 ~~L~~L~l~~n~~~~~~~---~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~-~l~~l~~L~~L~Ls 220 (457)
T 3bz5_A 148 TQLTELDCHLNKKITKLD---VTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL-DLNQNIQLTFLDCS 220 (457)
T ss_dssp TTCCEEECTTCSCCCCCC---CTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC-CCTTCTTCSEEECC
T ss_pred CcCCEEECCCCCcccccc---cccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee-ccccCCCCCEEECc
Confidence 356777777776666662 6677777778887777775 44 67777777777777777754 31112677777777
Q ss_pred cccCcccCCcchhhhccccceeccCCcccCCCCCCCCC----------CCCeEEecccCCCCCCC
Q 005693 196 FNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIP----------KLRHLNLSYNGLKGSIP 250 (682)
Q Consensus 196 ~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~l~----------~L~~l~ls~N~l~g~~p 250 (682)
+|+|++ +| ++.+++|+.|+|++|++++..+. .++ +|+.|++++|.+.|.+|
T Consensus 221 ~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~-~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~ 281 (457)
T 3bz5_A 221 SNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVS-TLSKLTTLHCIQTDLLEIDLTHNTQLIYFQ 281 (457)
T ss_dssp SSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCT-TCTTCCEEECTTCCCSCCCCTTCTTCCEEE
T ss_pred CCcccc-cC--ccccCCCCEEEeeCCcCCCcCHH-HCCCCCEEeccCCCCCEEECCCCccCCccc
Confidence 777776 45 67777777777777777764432 222 34455555555555554
No 372
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.41 E-value=8e-13 Score=145.01 Aligned_cols=133 Identities=25% Similarity=0.378 Sum_probs=104.3
Q ss_pred CeEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecccccCCcCCCCcccccceeecc
Q 005693 116 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFSPQLVVLDLS 195 (682)
Q Consensus 116 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~L~~L~ls 195 (682)
.+++.|++++|++++ +|. + .++|++|+|++|++++ +| .|+++++|++|++++|++++ +|..+ .+|++|+|+
T Consensus 111 ~~L~~L~l~~n~l~~-l~~--~--~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~-~~L~~L~L~ 181 (454)
T 1jl5_A 111 QSLKSLLVDNNNLKA-LSD--L--PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP-PSLEFIAAG 181 (454)
T ss_dssp TTCCEEECCSSCCSC-CCS--C--CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC-TTCCEEECC
T ss_pred CCCcEEECCCCccCc-ccC--C--CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc-ccccEEECc
Confidence 356667777776663 332 1 2689999999999986 77 59999999999999999986 66544 589999999
Q ss_pred cccCcccCCcchhhhccccceeccCCcccCCCCCCCCCCCCeEEecccCCCCCCCccccCCCCCCCCC
Q 005693 196 FNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFVG 263 (682)
Q Consensus 196 ~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~l~~~~ 263 (682)
+|++++ +| .++++++|+.|++++|++++ +|.. .++|+.|++++|+++ .+|. ++++++|+.++
T Consensus 182 ~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~-~~~L~~L~l~~n~l~-~lp~-~~~l~~L~~L~ 243 (454)
T 1jl5_A 182 NNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDL-PLSLESIVAGNNILE-ELPE-LQNLPFLTTIY 243 (454)
T ss_dssp SSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCC-CTTCCEEECCSSCCS-SCCC-CTTCTTCCEEE
T ss_pred CCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCC-cCcccEEECcCCcCC-cccc-cCCCCCCCEEE
Confidence 999997 66 68999999999999999987 4432 368999999999998 6774 77777776654
No 373
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.39 E-value=2.4e-13 Score=154.25 Aligned_cols=152 Identities=26% Similarity=0.351 Sum_probs=103.7
Q ss_pred CCCCCCCCCCCcceEEec------CCCCeEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCc
Q 005693 95 NWSSTNPICQSWVGINCT------QDRTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLR 168 (682)
Q Consensus 95 ~w~~~~~~c~~w~gv~C~------~~~~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~ 168 (682)
.|....++| .|.|..|. .....++.|++++|+++ .+|. .+. ++|+.|+|++|+|+ .+|. .+++|+
T Consensus 14 ~W~~~~~~~-~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~-~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~ 84 (622)
T 3g06_A 14 AWRRAAPAE-ESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPD-CLP--AHITTLVIPDNNLT-SLPA---LPPELR 84 (622)
T ss_dssp HHHHTCCGG-GHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCS-CCC--TTCSEEEECSCCCS-CCCC---CCTTCC
T ss_pred HHHhcCCcc-hhccccccCcccccccCCCCcEEEecCCCcC-ccCh-hhC--CCCcEEEecCCCCC-CCCC---cCCCCC
Confidence 576655655 78664321 11235788899999888 7887 344 78888888888888 5665 578888
Q ss_pred EEeecccccCCcCCCCcccccceeecccccCcccCCcchhhhccccceeccCCcccCCCCCCCCCCCCeEEecccCCCCC
Q 005693 169 YLYLQHNNFSGKIPSSFSPQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNLSYNGLKGS 248 (682)
Q Consensus 169 ~L~L~~N~l~g~~p~~~~~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~l~~L~~l~ls~N~l~g~ 248 (682)
+|+|++|+|+ .+|. ..++|++|+|++|+|++ +|. .+++|+.|+|++|+|++ +|. .+++|++|+|++|++++
T Consensus 85 ~L~Ls~N~l~-~lp~-~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~-~l~~L~~L~Ls~N~l~~- 155 (622)
T 3g06_A 85 TLEVSGNQLT-SLPV-LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPV-LPPGLQELSVSDNQLAS- 155 (622)
T ss_dssp EEEECSCCCS-CCCC-CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCSC-CCC-CCTTCCEEECCSSCCSC-
T ss_pred EEEcCCCcCC-cCCC-CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCCc-CCC-CCCCCCEEECcCCcCCC-
Confidence 8888888888 4666 44788888888888885 444 56777777788887775 333 24677777777777774
Q ss_pred CCccccCCCCCCCCCC
Q 005693 249 IPSSLQKFPNSSFVGN 264 (682)
Q Consensus 249 ~p~~~~~l~~l~~~~n 264 (682)
+|..+.++..|.+.+|
T Consensus 156 l~~~~~~L~~L~L~~N 171 (622)
T 3g06_A 156 LPALPSELCKLWAYNN 171 (622)
T ss_dssp CCCCCTTCCEEECCSS
T ss_pred cCCccCCCCEEECCCC
Confidence 4544445544444333
No 374
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.38 E-value=6.7e-13 Score=146.29 Aligned_cols=138 Identities=29% Similarity=0.345 Sum_probs=104.6
Q ss_pred CeEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecccccCCcCCCCcccccceeecc
Q 005693 116 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFSPQLVVLDLS 195 (682)
Q Consensus 116 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~L~~L~ls 195 (682)
.++..|++++|.+.+..| ++.+++|+.|+|++|++++. +.+..+++|+.|+|++|++++..|-.-.++|++|+|+
T Consensus 199 ~~L~~L~l~~n~l~~~~~---~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~ 273 (466)
T 1o6v_A 199 TNLESLIATNNQISDITP---LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 273 (466)
T ss_dssp TTCSEEECCSSCCCCCGG---GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGGGTTCTTCSEEECC
T ss_pred CCCCEEEecCCccccccc---ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchhhhcCCCCCEEECC
Confidence 467788888888885433 67788888888888888853 3678888888888888888876652223788888888
Q ss_pred cccCcccCCcchhhhccccceeccCCcccCCCCCCCCCCCCeEEecccCCCCCCCccccCCCCCCCC
Q 005693 196 FNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFV 262 (682)
Q Consensus 196 ~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~l~~~ 262 (682)
+|++++..| +..+++|+.|+|++|++++..|-..+++|+.|+|++|++++..| +..+++|+.+
T Consensus 274 ~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L 336 (466)
T 1o6v_A 274 ANQISNISP--LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISP--VSSLTKLQRL 336 (466)
T ss_dssp SSCCCCCGG--GTTCTTCSEEECCSSCCSCCGGGGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEE
T ss_pred CCccCcccc--ccCCCccCeEEcCCCcccCchhhcCCCCCCEEECcCCcCCCchh--hccCccCCEe
Confidence 888886544 88888888888888888876665578888888888888887655 4555555433
No 375
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.38 E-value=7.9e-13 Score=134.16 Aligned_cols=123 Identities=24% Similarity=0.292 Sum_probs=105.5
Q ss_pred CeEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecccccCCcCCCCcc--cccceee
Q 005693 116 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLD 193 (682)
Q Consensus 116 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~--~~L~~L~ 193 (682)
.++..|+|++|++++ +++ ++++++|++|+|++|++++ +|. +.. ++|+.|+|++|++++. | .+. ++|++|+
T Consensus 63 ~~L~~L~L~~N~i~~-~~~--l~~l~~L~~L~L~~N~l~~-l~~-~~~-~~L~~L~L~~N~l~~~-~-~l~~l~~L~~L~ 134 (263)
T 1xeu_A 63 TNLKELHLSHNQISD-LSP--LKDLTKLEELSVNRNRLKN-LNG-IPS-ACLSRLFLDNNELRDT-D-SLIHLKNLEILS 134 (263)
T ss_dssp TTCCEEECCSSCCCC-CGG--GTTCSSCCEEECCSSCCSC-CTT-CCC-SSCCEEECCSSCCSBS-G-GGTTCTTCCEEE
T ss_pred CCCCEEECCCCccCC-Chh--hccCCCCCEEECCCCccCC-cCc-ccc-CcccEEEccCCccCCC-h-hhcCcccccEEE
Confidence 478999999999985 554 9999999999999999995 554 333 9999999999999964 4 344 8999999
Q ss_pred cccccCcccCCcchhhhccccceeccCCcccCCCCCCCCCCCCeEEecccCCCCC
Q 005693 194 LSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNLSYNGLKGS 248 (682)
Q Consensus 194 ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~l~~L~~l~ls~N~l~g~ 248 (682)
|++|+|++. | .++.+++|+.|+|++|++++...-..+++|+.|++++|.+++.
T Consensus 135 Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 135 IRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNTGGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp CTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBCTTSTTCCCCCEEEEEEEEEECC
T ss_pred CCCCcCCCC-h-HHccCCCCCEEECCCCcCcchHHhccCCCCCEEeCCCCcccCC
Confidence 999999975 4 7999999999999999999872233899999999999999865
No 376
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.37 E-value=6.4e-13 Score=140.32 Aligned_cols=139 Identities=22% Similarity=0.298 Sum_probs=89.9
Q ss_pred CeEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecccccCCcCCCCcccccceeecc
Q 005693 116 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFSPQLVVLDLS 195 (682)
Q Consensus 116 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~L~~L~ls 195 (682)
.++..|++++|.+.+ +++ +..+++|+.|++++|.+++..+ +..+++|+.|+|++|++++..+-.-.++|++|+|+
T Consensus 177 ~~L~~L~l~~n~l~~-~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~ 251 (347)
T 4fmz_A 177 TDLYSLSLNYNQIED-ISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSPLANLSQLTWLEIG 251 (347)
T ss_dssp TTCSEEECTTSCCCC-CGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECC
T ss_pred CCCCEEEccCCcccc-ccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcchhcCCCCCEEECC
Confidence 357778888887763 443 6677777777777777775444 66777777777777777654431112667777777
Q ss_pred cccCcccCCcchhhhccccceeccCCcccCCCCCC-CCCCCCeEEecccCCCCCCCccccCCCCCCCC
Q 005693 196 FNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF-DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFV 262 (682)
Q Consensus 196 ~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~-~l~~L~~l~ls~N~l~g~~p~~~~~l~~l~~~ 262 (682)
+|++++. +.+..+++|+.|++++|++++. +.. .+++|+.|++++|++++..|..+.++++|+.+
T Consensus 252 ~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L 316 (347)
T 4fmz_A 252 TNQISDI--NAVKDLTKLKMLNVGSNQISDI-SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTL 316 (347)
T ss_dssp SSCCCCC--GGGTTCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEE
T ss_pred CCccCCC--hhHhcCCCcCEEEccCCccCCC-hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEE
Confidence 7777653 3566777777777777777654 332 66677777777777766666666666555544
No 377
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.37 E-value=6.8e-13 Score=140.24 Aligned_cols=106 Identities=26% Similarity=0.360 Sum_probs=84.4
Q ss_pred CCcceEEecCCCCeEEEEEeCCC-cccccCCccccCCCCCCcEEEccC-CCCCCCCCCcCCCCCCCcEEeecccccCCcC
Q 005693 104 QSWVGINCTQDRTRVFGLRLPGI-GLVGPIPNNTLGKLDALEVLSLRS-NVLTGGLPSEITSLPSLRYLYLQHNNFSGKI 181 (682)
Q Consensus 104 ~~w~gv~C~~~~~~v~~l~l~~~-~l~g~lp~~~~~~l~~L~~L~L~~-N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~ 181 (682)
|+|.+|.|++ + +|+ .||. |..+++|+.|+|++ |+|++..|..|.+|++|+.|+|++|+|++..
T Consensus 8 C~~~~v~~~~------------~n~l~-~ip~--l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 72 (347)
T 2ifg_A 8 HGSSGLRCTR------------DGALD-SLHH--LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVA 72 (347)
T ss_dssp SSSSCEECCS------------SCCCT-TTTT--SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEEC
T ss_pred ccCCEEEcCC------------CCCCC-ccCC--CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeC
Confidence 3677777753 4 566 5886 89999999999996 9999877788999999999999999999877
Q ss_pred CCCcc--cccceeecccccCcccCCcchhhhccccceeccCCcccC
Q 005693 182 PSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSG 225 (682)
Q Consensus 182 p~~~~--~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g 225 (682)
|..|. ++|++|+|++|+|++..|..|..++ |+.|+|++|.|..
T Consensus 73 ~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 73 PDAFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp TTGGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred HHHhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCccC
Confidence 77766 6888888888888866555665555 8888888887763
No 378
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.37 E-value=2.5e-12 Score=141.24 Aligned_cols=133 Identities=23% Similarity=0.202 Sum_probs=96.0
Q ss_pred CeEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecccccCCcCCCCcccccceeecc
Q 005693 116 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFSPQLVVLDLS 195 (682)
Q Consensus 116 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~L~~L~ls 195 (682)
.++..|++++|++++ +| ++.+++|++|+|++|++++. | ++++++|++|++++|+..+.++-.-.++|++|+|+
T Consensus 106 ~~L~~L~L~~N~l~~-l~---~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~~~~~l~~L~~L~ls 178 (457)
T 3bz5_A 106 TKLTYLNCDTNKLTK-LD---VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKLDVTPQTQLTTLDCS 178 (457)
T ss_dssp TTCCEEECCSSCCSC-CC---CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCCCCTTCTTCCEEECC
T ss_pred CcCCEEECCCCcCCe-ec---CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCcccccccccCCcCCEEECC
Confidence 467888999998886 43 78888999999999988863 3 77888888888888866666643333678888888
Q ss_pred cccCcccCCcchhhhccccceeccCCcccCCCCCCCCCCCCeEEecccCCCCCCCccccCCCCCCCC
Q 005693 196 FNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFV 262 (682)
Q Consensus 196 ~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~l~~~ 262 (682)
+|+|++ +| ++.+++|+.|++++|++++. +-..+++|+.|+|++|++++ +| ++.+++|+.+
T Consensus 179 ~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~-~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L 238 (457)
T 3bz5_A 179 FNKITE-LD--VSQNKLLNRLNCDTNNITKL-DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYF 238 (457)
T ss_dssp SSCCCC-CC--CTTCTTCCEEECCSSCCSCC-CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEE
T ss_pred CCccce-ec--cccCCCCCEEECcCCcCCee-ccccCCCCCEEECcCCcccc-cC--ccccCCCCEE
Confidence 888776 44 67777777777777777764 44467777777777777776 44 5555555443
No 379
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.35 E-value=1.7e-14 Score=151.64 Aligned_cols=147 Identities=23% Similarity=0.295 Sum_probs=100.4
Q ss_pred CeEEEEEeCCCccccc-CCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeeccc-ccCCc-CCCCcc--cccc
Q 005693 116 TRVFGLRLPGIGLVGP-IPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHN-NFSGK-IPSSFS--PQLV 190 (682)
Q Consensus 116 ~~v~~l~l~~~~l~g~-lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N-~l~g~-~p~~~~--~~L~ 190 (682)
.++..|+|++|.+++. +|. .+..+++|++|+|++|.+++..|..++.+++|++|+|++| .+++. +|..+. ++|+
T Consensus 93 ~~L~~L~L~~~~l~~~~~~~-~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~ 171 (336)
T 2ast_B 93 FRVQHMDLSNSVIEVSTLHG-ILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLD 171 (336)
T ss_dssp BCCCEEECTTCEECHHHHHH-HHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCC
T ss_pred CCCCEEEccCCCcCHHHHHH-HHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCC
Confidence 4567777777777654 554 5777777777777777777777777777777777777777 56642 343333 6777
Q ss_pred eeecccc-cCccc-CCcchhhhc-cccceeccCC--ccc-CCCCCC--CCCCCCeEEecccC-CCCCCCccccCCCCCCC
Q 005693 191 VLDLSFN-SFTGN-IPQSIQNLT-QLTGLSLQSN--NLS-GSIPNF--DIPKLRHLNLSYNG-LKGSIPSSLQKFPNSSF 261 (682)
Q Consensus 191 ~L~ls~N-~l~g~-~p~~~~~l~-~L~~L~l~~N--~l~-g~~p~~--~l~~L~~l~ls~N~-l~g~~p~~~~~l~~l~~ 261 (682)
+|+|++| ++++. ++..+.+++ +|+.|+|++| .++ +.+|.. .+++|+.|+|++|. +++..+..+.++++|+.
T Consensus 172 ~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~ 251 (336)
T 2ast_B 172 ELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQH 251 (336)
T ss_dssp EEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCE
T ss_pred EEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCE
Confidence 7777777 77754 566677777 7778887777 344 333432 67778888888887 66666667776666665
Q ss_pred CC
Q 005693 262 VG 263 (682)
Q Consensus 262 ~~ 263 (682)
++
T Consensus 252 L~ 253 (336)
T 2ast_B 252 LS 253 (336)
T ss_dssp EE
T ss_pred ee
Confidence 54
No 380
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.35 E-value=6.9e-13 Score=140.07 Aligned_cols=137 Identities=22% Similarity=0.287 Sum_probs=114.7
Q ss_pred CeEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecccccCCcCCCCcc--cccceee
Q 005693 116 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLD 193 (682)
Q Consensus 116 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~--~~L~~L~ 193 (682)
.++..+++++|++.+ +++ ++.+++|+.|+|++|++++..+ +..+++|++|+|++|++++. + .+. ++|++|+
T Consensus 199 ~~L~~L~l~~n~l~~-~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~-~~~~l~~L~~L~ 271 (347)
T 4fmz_A 199 TSLHYFTAYVNQITD-ITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI-N-AVKDLTKLKMLN 271 (347)
T ss_dssp TTCCEEECCSSCCCC-CGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC-G-GGTTCTTCCEEE
T ss_pred CccceeecccCCCCC-Cch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC-h-hHhcCCCcCEEE
Confidence 467889999999985 333 8899999999999999995544 99999999999999999964 3 333 7999999
Q ss_pred cccccCcccCCcchhhhccccceeccCCcccCCCCCC--CCCCCCeEEecccCCCCCCCccccCCCCCCCCC
Q 005693 194 LSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFVG 263 (682)
Q Consensus 194 ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~l~~L~~l~ls~N~l~g~~p~~~~~l~~l~~~~ 263 (682)
|++|++++. +.+..+++|+.|+|++|++++..|.. .+++|+.|+|++|++++..| +..+++|+.++
T Consensus 272 l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~ 339 (347)
T 4fmz_A 272 VGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSAD 339 (347)
T ss_dssp CCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEES
T ss_pred ccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhccceee
Confidence 999999975 46899999999999999999887764 89999999999999997766 55666655543
No 381
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.31 E-value=4.2e-14 Score=148.64 Aligned_cols=146 Identities=19% Similarity=0.267 Sum_probs=117.8
Q ss_pred CeEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCC-CCCcCCCCCCCcEEeecccccCCcCCCCcc--ccccee
Q 005693 116 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGG-LPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVL 192 (682)
Q Consensus 116 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~-~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~--~~L~~L 192 (682)
.++..+++++|.+.+..+. +..+++|++|+|++|.+++. +|..+.++++|++|+|++|++++..|..+. ++|++|
T Consensus 70 ~~l~~L~l~~n~l~~~~~~--~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L 147 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE--HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRL 147 (336)
T ss_dssp TTCSEEECTTCEECSCCCS--CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEE
T ss_pred ccceEEEcCCccccccchh--hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEE
Confidence 4678889999999877664 67899999999999999876 888889999999999999999877776665 789999
Q ss_pred ecccc-cCccc-CCcchhhhccccceeccCC-cccCC-CCCC--CCC-CCCeEEeccc--CCC-CCCCccccCCCCCCCC
Q 005693 193 DLSFN-SFTGN-IPQSIQNLTQLTGLSLQSN-NLSGS-IPNF--DIP-KLRHLNLSYN--GLK-GSIPSSLQKFPNSSFV 262 (682)
Q Consensus 193 ~ls~N-~l~g~-~p~~~~~l~~L~~L~l~~N-~l~g~-~p~~--~l~-~L~~l~ls~N--~l~-g~~p~~~~~l~~l~~~ 262 (682)
+|++| .+++. +|..+.++++|+.|+|++| ++++. ++.. .++ +|++|+|++| .++ +.+|..+.++++|+.+
T Consensus 148 ~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L 227 (336)
T 2ast_B 148 NLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHL 227 (336)
T ss_dssp ECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEE
T ss_pred ECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEE
Confidence 99999 78863 7778899999999999999 88864 4442 778 9999999999 565 4566666666666554
Q ss_pred C
Q 005693 263 G 263 (682)
Q Consensus 263 ~ 263 (682)
+
T Consensus 228 ~ 228 (336)
T 2ast_B 228 D 228 (336)
T ss_dssp E
T ss_pred e
Confidence 3
No 382
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.29 E-value=7.2e-14 Score=150.12 Aligned_cols=148 Identities=20% Similarity=0.300 Sum_probs=92.9
Q ss_pred CeEEEEEeCCC---cccccCCccc------cCCCCCCcEEEccCCCCCC----CCCCcCCCCCCCcEEeecccccCCcCC
Q 005693 116 TRVFGLRLPGI---GLVGPIPNNT------LGKLDALEVLSLRSNVLTG----GLPSEITSLPSLRYLYLQHNNFSGKIP 182 (682)
Q Consensus 116 ~~v~~l~l~~~---~l~g~lp~~~------~~~l~~L~~L~L~~N~l~g----~~p~~~~~l~~L~~L~L~~N~l~g~~p 182 (682)
.++..|+|++| .++|.+|.+. +..+++|++|+|++|.+++ .+|..+.++++|++|+|++|.+++..+
T Consensus 60 ~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~ 139 (386)
T 2ca6_A 60 KDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAG 139 (386)
T ss_dssp TTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHH
T ss_pred CCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHH
Confidence 35666777664 4555555421 3667777777777777776 366667777777777777777764333
Q ss_pred CCcc---------------cccceeecccccCc-ccCC---cchhhhccccceeccCCccc--C---CCC-CC-CCCCCC
Q 005693 183 SSFS---------------PQLVVLDLSFNSFT-GNIP---QSIQNLTQLTGLSLQSNNLS--G---SIP-NF-DIPKLR 236 (682)
Q Consensus 183 ~~~~---------------~~L~~L~ls~N~l~-g~~p---~~~~~l~~L~~L~l~~N~l~--g---~~p-~~-~l~~L~ 236 (682)
..+. ++|++|+|++|+|+ +.+| ..+..+++|+.|+|++|+|+ | .+| .. .+++|+
T Consensus 140 ~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~ 219 (386)
T 2ca6_A 140 AKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELK 219 (386)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCC
T ss_pred HHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCcc
Confidence 3332 46777777777776 4444 45666777777777777776 2 233 22 566777
Q ss_pred eEEecccCCC----CCCCccccCCCCCCCCC
Q 005693 237 HLNLSYNGLK----GSIPSSLQKFPNSSFVG 263 (682)
Q Consensus 237 ~l~ls~N~l~----g~~p~~~~~l~~l~~~~ 263 (682)
.|+|++|.++ +.+|..+.++++|..++
T Consensus 220 ~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~ 250 (386)
T 2ca6_A 220 VLDLQDNTFTHLGSSALAIALKSWPNLRELG 250 (386)
T ss_dssp EEECCSSCCHHHHHHHHHHHGGGCTTCCEEE
T ss_pred EEECcCCCCCcHHHHHHHHHHccCCCcCEEE
Confidence 7777777775 45666666666555443
No 383
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.28 E-value=7.8e-12 Score=141.85 Aligned_cols=132 Identities=27% Similarity=0.344 Sum_probs=70.4
Q ss_pred eEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCc---CCCC--------------CCCcEEeecccccCC
Q 005693 117 RVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSE---ITSL--------------PSLRYLYLQHNNFSG 179 (682)
Q Consensus 117 ~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~---~~~l--------------~~L~~L~L~~N~l~g 179 (682)
.+..|++++|+++ .+|. .+++|++|+|++|++++ +|.. +..| ++|+.|+|++|+|++
T Consensus 122 ~L~~L~L~~N~l~-~lp~----~l~~L~~L~Ls~N~l~~-l~~~~~~L~~L~L~~N~l~~l~~~~~~L~~L~Ls~N~l~~ 195 (622)
T 3g06_A 122 GLCKLWIFGNQLT-SLPV----LPPGLQELSVSDNQLAS-LPALPSELCKLWAYNNQLTSLPMLPSGLQELSVSDNQLAS 195 (622)
T ss_dssp TCCEEECCSSCCS-CCCC----CCTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSC
T ss_pred CcCEEECCCCCCC-cCCC----CCCCCCEEECcCCcCCC-cCCccCCCCEEECCCCCCCCCcccCCCCcEEECCCCCCCC
Confidence 4556666666666 3554 13666666776666664 2322 2222 667777777777774
Q ss_pred cCCCCc-------------------ccccceeecccccCcccCCcchhhhccccceeccCCcccCCCCCCCCCCCCeEEe
Q 005693 180 KIPSSF-------------------SPQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIPKLRHLNL 240 (682)
Q Consensus 180 ~~p~~~-------------------~~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~l~~L~~l~l 240 (682)
+|..+ .++|++|+|++|+|++ +| ..+++|+.|+|++|+|++ +|. .+++|+.|+|
T Consensus 196 -l~~~~~~L~~L~L~~N~l~~l~~~~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~-lp~-~~~~L~~L~L 268 (622)
T 3g06_A 196 -LPTLPSELYKLWAYNNRLTSLPALPSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLTS-LPM-LPSGLLSLSV 268 (622)
T ss_dssp -CCCCCTTCCEEECCSSCCSSCCCCCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCC-CCTTCCEEEC
T ss_pred -CCCccchhhEEECcCCcccccCCCCCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCCc-CCc-ccccCcEEeC
Confidence 34322 1345555555555553 33 233455555555555552 333 4455666666
Q ss_pred cccCCCCCCCccccCCCCCCCC
Q 005693 241 SYNGLKGSIPSSLQKFPNSSFV 262 (682)
Q Consensus 241 s~N~l~g~~p~~~~~l~~l~~~ 262 (682)
++|+|+ .+|..+.++++|..+
T Consensus 269 s~N~L~-~lp~~l~~l~~L~~L 289 (622)
T 3g06_A 269 YRNQLT-RLPESLIHLSSETTV 289 (622)
T ss_dssp CSSCCC-SCCGGGGGSCTTCEE
T ss_pred CCCCCC-cCCHHHhhccccCEE
Confidence 666655 455555555554443
No 384
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.28 E-value=5.3e-12 Score=133.38 Aligned_cols=102 Identities=20% Similarity=0.168 Sum_probs=90.7
Q ss_pred cEEEccCC-CCCCCCCCcCCCCCCCcEEeecc-cccCCcCCCCcc--cccceeecccccCcccCCcchhhhccccceecc
Q 005693 144 EVLSLRSN-VLTGGLPSEITSLPSLRYLYLQH-NNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQ 219 (682)
Q Consensus 144 ~~L~L~~N-~l~g~~p~~~~~l~~L~~L~L~~-N~l~g~~p~~~~--~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~ 219 (682)
..+++++| +|+ .+|. |..+++|+.|+|++ |+|++..|..|. ++|++|+|++|+|++..|..|++|++|+.|+|+
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 35799998 899 6898 99999999999996 999988777776 899999999999999999999999999999999
Q ss_pred CCcccCCCCCC-CCCCCCeEEecccCCCC
Q 005693 220 SNNLSGSIPNF-DIPKLRHLNLSYNGLKG 247 (682)
Q Consensus 220 ~N~l~g~~p~~-~l~~L~~l~ls~N~l~g 247 (682)
+|+|++.++.. ...+|+.|+|++|.|..
T Consensus 89 ~N~l~~~~~~~~~~~~L~~l~l~~N~~~c 117 (347)
T 2ifg_A 89 FNALESLSWKTVQGLSLQELVLSGNPLHC 117 (347)
T ss_dssp SSCCSCCCSTTTCSCCCCEEECCSSCCCC
T ss_pred CCccceeCHHHcccCCceEEEeeCCCccC
Confidence 99999776654 43449999999999984
No 385
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.24 E-value=3.5e-11 Score=121.75 Aligned_cols=136 Identities=17% Similarity=0.113 Sum_probs=107.2
Q ss_pred ccccccCeEEEEEEEEcCCceEEEEEeeccc-cChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccCCchh
Q 005693 391 EVLGKGSYGTAYKAVLEESTTVVVKRLKEVV-VGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLS 469 (682)
Q Consensus 391 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~-~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~L~ 469 (682)
..++.|+++.||++... ++.+++|+..... ....++.+|++++..+.++..+.++++++...+..|+||||++|.+|.
T Consensus 20 ~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~ 98 (263)
T 3tm0_A 20 KDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCS 98 (263)
T ss_dssp ECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHH
T ss_pred eeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCCeehh
Confidence 45677788999999754 6789999987532 234579999999999966888999999999888999999999999998
Q ss_pred HhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-------------------------------------------
Q 005693 470 TLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMG------------------------------------------- 506 (682)
Q Consensus 470 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~------------------------------------------- 506 (682)
+.+.. ......++.+++++++.||+..
T Consensus 99 ~~~~~----------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (263)
T 3tm0_A 99 EEYED----------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPR 168 (263)
T ss_dssp HHCCT----------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSHH
T ss_pred hccCC----------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCHH
Confidence 76421 1223467889999999999811
Q ss_pred -------------CCCcEecCCCCCCeEecCCCCeEEeecCCCC
Q 005693 507 -------------GPKFTHGNIKASNVLINQDLDGCISDFGLTP 537 (682)
Q Consensus 507 -------------~~~ivHrDLk~~NILl~~~~~~kl~DfGla~ 537 (682)
.+.++|+|+++.||+++++..+.|+||+.+.
T Consensus 169 ~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 169 ELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp HHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 1338999999999999876666799998753
No 386
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.23 E-value=4e-13 Score=143.00 Aligned_cols=135 Identities=24% Similarity=0.283 Sum_probs=76.8
Q ss_pred eEEEEEeCCCcccccCCc---cccCCCC-CCcEEEccCCCCCCCCCCcCCCC-----CCCcEEeecccccCCcCCCCcc-
Q 005693 117 RVFGLRLPGIGLVGPIPN---NTLGKLD-ALEVLSLRSNVLTGGLPSEITSL-----PSLRYLYLQHNNFSGKIPSSFS- 186 (682)
Q Consensus 117 ~v~~l~l~~~~l~g~lp~---~~~~~l~-~L~~L~L~~N~l~g~~p~~~~~l-----~~L~~L~L~~N~l~g~~p~~~~- 186 (682)
+++.|+|++|++++.-+. ..+..++ +|++|+|++|+|++..+..+..+ ++|++|+|++|++++..+..+.
T Consensus 23 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~ 102 (362)
T 3goz_A 23 GVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVK 102 (362)
T ss_dssp TCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHH
T ss_pred CceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHH
Confidence 366666666666533220 2455666 66666666666665555555554 6666666666666654444322
Q ss_pred ------cccceeecccccCcccCCcchhhh-----ccccceeccCCcccCCCCC----C--CCC-CCCeEEecccCCCCC
Q 005693 187 ------PQLVVLDLSFNSFTGNIPQSIQNL-----TQLTGLSLQSNNLSGSIPN----F--DIP-KLRHLNLSYNGLKGS 248 (682)
Q Consensus 187 ------~~L~~L~ls~N~l~g~~p~~~~~l-----~~L~~L~l~~N~l~g~~p~----~--~l~-~L~~l~ls~N~l~g~ 248 (682)
++|++|+|++|+|++..+..+... ++|+.|+|++|++++..+. . .++ +|+.|+|++|++++.
T Consensus 103 ~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~ 182 (362)
T 3goz_A 103 TLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASK 182 (362)
T ss_dssp HHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGS
T ss_pred HHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchh
Confidence 356666666666665555444432 4666666666666642221 1 233 666666666666655
Q ss_pred CCc
Q 005693 249 IPS 251 (682)
Q Consensus 249 ~p~ 251 (682)
.+.
T Consensus 183 ~~~ 185 (362)
T 3goz_A 183 NCA 185 (362)
T ss_dssp CHH
T ss_pred hHH
Confidence 443
No 387
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.23 E-value=3.5e-13 Score=144.72 Aligned_cols=148 Identities=20% Similarity=0.271 Sum_probs=116.0
Q ss_pred CeEEEEEeCCCcccccCCc---cccCCCCCCcEEEccCC---CCCCCCCCcC-------CCCCCCcEEeecccccCC---
Q 005693 116 TRVFGLRLPGIGLVGPIPN---NTLGKLDALEVLSLRSN---VLTGGLPSEI-------TSLPSLRYLYLQHNNFSG--- 179 (682)
Q Consensus 116 ~~v~~l~l~~~~l~g~lp~---~~~~~l~~L~~L~L~~N---~l~g~~p~~~-------~~l~~L~~L~L~~N~l~g--- 179 (682)
.+++.|+|++|++.+..+. ..+..+++|++|+|++| ++++.+|..+ .++++|++|+|++|++++
T Consensus 32 ~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~ 111 (386)
T 2ca6_A 32 DSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQ 111 (386)
T ss_dssp SCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTH
T ss_pred CCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHH
Confidence 4688999999999865332 14778999999999995 5666777666 789999999999999997
Q ss_pred -cCCCCcc--cccceeecccccCcccCCcchh----hh---------ccccceeccCCccc-CCCCC----C-CCCCCCe
Q 005693 180 -KIPSSFS--PQLVVLDLSFNSFTGNIPQSIQ----NL---------TQLTGLSLQSNNLS-GSIPN----F-DIPKLRH 237 (682)
Q Consensus 180 -~~p~~~~--~~L~~L~ls~N~l~g~~p~~~~----~l---------~~L~~L~l~~N~l~-g~~p~----~-~l~~L~~ 237 (682)
.+|..+. ++|++|+|++|+|++..+..+. .+ ++|+.|+|++|+++ +.+|. . .+++|+.
T Consensus 112 ~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~ 191 (386)
T 2ca6_A 112 EPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHT 191 (386)
T ss_dssp HHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCE
T ss_pred HHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCE
Confidence 4665555 7999999999999865554444 44 89999999999998 45553 1 6789999
Q ss_pred EEecccCCC--C---CCCccccCCCCCCCCC
Q 005693 238 LNLSYNGLK--G---SIPSSLQKFPNSSFVG 263 (682)
Q Consensus 238 l~ls~N~l~--g---~~p~~~~~l~~l~~~~ 263 (682)
|+|++|+++ | .+|..+.++++|+.++
T Consensus 192 L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~ 222 (386)
T 2ca6_A 192 VKMVQNGIRPEGIEHLLLEGLAYCQELKVLD 222 (386)
T ss_dssp EECCSSCCCHHHHHHHHHTTGGGCTTCCEEE
T ss_pred EECcCCCCCHhHHHHHHHHHhhcCCCccEEE
Confidence 999999998 3 3444677777776654
No 388
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.22 E-value=9.2e-14 Score=134.67 Aligned_cols=123 Identities=20% Similarity=0.231 Sum_probs=105.8
Q ss_pred cCCCCCCcEEEccCCCCCCCCCC------cCCCCCCCcEEeecccccCCcCCCCcc--cccceeecccccCcccCCcchh
Q 005693 137 LGKLDALEVLSLRSNVLTGGLPS------EITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQ 208 (682)
Q Consensus 137 ~~~l~~L~~L~L~~N~l~g~~p~------~~~~l~~L~~L~L~~N~l~g~~p~~~~--~~L~~L~ls~N~l~g~~p~~~~ 208 (682)
+.....++.++|+.|.++|.+|. .+..+++|++|+|++|++++ +| .+. ++|++|+|++|+|+ .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 55677889999999999999887 89999999999999999997 77 665 89999999999999 7899999
Q ss_pred hhccccceeccCCcccCCCCCC-CCCCCCeEEecccCCCCCCC-ccccCCCCCCCCC
Q 005693 209 NLTQLTGLSLQSNNLSGSIPNF-DIPKLRHLNLSYNGLKGSIP-SSLQKFPNSSFVG 263 (682)
Q Consensus 209 ~l~~L~~L~l~~N~l~g~~p~~-~l~~L~~l~ls~N~l~g~~p-~~~~~l~~l~~~~ 263 (682)
.+++|+.|+|++|++++ +|.. .+++|+.|+|++|++++..+ ..+.++++|+.++
T Consensus 91 ~~~~L~~L~L~~N~l~~-l~~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~ 146 (198)
T 1ds9_A 91 VADTLEELWISYNQIAS-LSGIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLL 146 (198)
T ss_dssp HHHHCSEEEEEEEECCC-HHHHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEE
T ss_pred cCCcCCEEECcCCcCCc-CCccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEE
Confidence 99999999999999997 4443 78899999999999995332 4677777776654
No 389
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.21 E-value=1.5e-12 Score=138.56 Aligned_cols=129 Identities=20% Similarity=0.145 Sum_probs=109.2
Q ss_pred EEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCC----CcCCCCC-CCcEEeecccccCCcCCCCcc-------cc
Q 005693 121 LRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLP----SEITSLP-SLRYLYLQHNNFSGKIPSSFS-------PQ 188 (682)
Q Consensus 121 l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p----~~~~~l~-~L~~L~L~~N~l~g~~p~~~~-------~~ 188 (682)
.+|+.++++|.+|. .+...++|++|||++|.+++..+ ..+.+++ +|++|+|++|++++..+..+. ++
T Consensus 3 ~~ls~n~~~~~~~~-~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 3 YKLTLHPGSNPVEE-FTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EECCCCTTCCHHHH-HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred cccccccchHHHHH-HHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 57899999998887 67777779999999999997766 6788898 999999999999987666553 58
Q ss_pred cceeecccccCcccCCcchhhh-----ccccceeccCCcccCCCCCC------C-CCCCCeEEecccCCCCCCC
Q 005693 189 LVVLDLSFNSFTGNIPQSIQNL-----TQLTGLSLQSNNLSGSIPNF------D-IPKLRHLNLSYNGLKGSIP 250 (682)
Q Consensus 189 L~~L~ls~N~l~g~~p~~~~~l-----~~L~~L~l~~N~l~g~~p~~------~-l~~L~~l~ls~N~l~g~~p 250 (682)
|++|+|++|+|++..+..+... ++|+.|+|++|+|++..+.. . .++|++|+|++|++++.-+
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~ 155 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSS 155 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHH
Confidence 9999999999998888876665 89999999999998766532 3 3699999999999996443
No 390
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.15 E-value=6.2e-11 Score=125.38 Aligned_cols=139 Identities=15% Similarity=0.114 Sum_probs=107.1
Q ss_pred EEecCCCCeEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecccccCCcCCCCc-c-
Q 005693 109 INCTQDRTRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSF-S- 186 (682)
Q Consensus 109 v~C~~~~~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~-~- 186 (682)
..|+. ..++-++++|+ .||.+ + .++|++|+|++|+|+..-+..|.+|++|++|+|++|++.+.+|... .
T Consensus 7 C~C~~-----~~v~C~~~~Lt-~iP~~-l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~ 77 (350)
T 4ay9_X 7 CHCSN-----RVFLCQESKVT-EIPSD-L--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSN 77 (350)
T ss_dssp SEEET-----TEEEEESTTCC-SCCTT-C--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCS
T ss_pred cEeeC-----CEEEecCCCCC-ccCcC-c--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhc
Confidence 46764 24678899998 78873 4 4689999999999995444679999999999999999988888654 3
Q ss_pred -ccc-ceeecccccCcccCCcchhhhccccceeccCCcccCCCCCC--CCCCCCeEEecc-cCCCCCCCccccCC
Q 005693 187 -PQL-VVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPNF--DIPKLRHLNLSY-NGLKGSIPSSLQKF 256 (682)
Q Consensus 187 -~~L-~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~l~~L~~l~ls~-N~l~g~~p~~~~~l 256 (682)
++| +.+++++|+|++..|..|.++++|+.|++++|+|++..+.. ...++..|++++ |++....+..|..+
T Consensus 78 L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~ 152 (350)
T 4ay9_X 78 LPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGL 152 (350)
T ss_dssp CTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTS
T ss_pred chhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhc
Confidence 444 45788889999888999999999999999999999766643 555677777765 45553333445444
No 391
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.06 E-value=1.7e-12 Score=142.57 Aligned_cols=148 Identities=20% Similarity=0.092 Sum_probs=114.6
Q ss_pred CeEEEEEeCCCccccc----CCccccCCCCCCcEEEccCCCCCCC----CCCcCCCCCCCcEEeecccccCCcCCCCcc-
Q 005693 116 TRVFGLRLPGIGLVGP----IPNNTLGKLDALEVLSLRSNVLTGG----LPSEITSLPSLRYLYLQHNNFSGKIPSSFS- 186 (682)
Q Consensus 116 ~~v~~l~l~~~~l~g~----lp~~~~~~l~~L~~L~L~~N~l~g~----~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~- 186 (682)
.++..|+|++|.+.+. +.+..+..+++|++|+|++|++++. ++..+.++++|++|+|++|++++..+..+.
T Consensus 227 ~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~ 306 (461)
T 1z7x_W 227 ASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCE 306 (461)
T ss_dssp TTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHH
T ss_pred CCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHH
Confidence 4688999999988753 2222344689999999999999864 677788899999999999999754443332
Q ss_pred ------cccceeecccccCccc----CCcchhhhccccceeccCCcccCCCCCC-------CCCCCCeEEecccCCCC--
Q 005693 187 ------PQLVVLDLSFNSFTGN----IPQSIQNLTQLTGLSLQSNNLSGSIPNF-------DIPKLRHLNLSYNGLKG-- 247 (682)
Q Consensus 187 ------~~L~~L~ls~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~g~~p~~-------~l~~L~~l~ls~N~l~g-- 247 (682)
++|++|+|++|++++. +|..+..+++|+.|+|++|++++..+.. ..++|+.|+|++|++++
T Consensus 307 ~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~ 386 (461)
T 1z7x_W 307 TLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSS 386 (461)
T ss_dssp HHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHH
T ss_pred HhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhh
Confidence 4899999999999976 5677888899999999999998654321 26799999999999986
Q ss_pred --CCCccccCCCCCCCCC
Q 005693 248 --SIPSSLQKFPNSSFVG 263 (682)
Q Consensus 248 --~~p~~~~~l~~l~~~~ 263 (682)
.+|..+.++++|+.++
T Consensus 387 ~~~l~~~l~~~~~L~~L~ 404 (461)
T 1z7x_W 387 CSSLAATLLANHSLRELD 404 (461)
T ss_dssp HHHHHHHHHHCCCCCEEE
T ss_pred HHHHHHHHHhCCCccEEE
Confidence 7777776666666553
No 392
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.06 E-value=5.5e-10 Score=112.33 Aligned_cols=131 Identities=11% Similarity=0.085 Sum_probs=98.3
Q ss_pred ccc-ccCeEEEEEEEEcCCceEEEEEeeccccChhhHHHHHHHHHHhcCCCc-eeceEEEEEecCceEEEEeeccCCchh
Q 005693 392 VLG-KGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPN-VVPLRAYYYSKDEKLLVYDYFASGSLS 469 (682)
Q Consensus 392 ~lG-~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~n-iv~l~~~~~~~~~~~lV~e~~~~g~L~ 469 (682)
.++ .|..+.||++...++..+++|..... ....+.+|++++..+.++.- +.+++++...++..++||||++|.++.
T Consensus 26 ~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~--~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~ 103 (264)
T 1nd4_A 26 QQTIGCSDAAVFRLSAQGRPVLFVKTDLSG--ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL 103 (264)
T ss_dssp ECSCTTSSCEEEEEECTTSCCEEEEEECSC--TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT
T ss_pred ecccCCCCceEEEEecCCCCeEEEEeCCcc--cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC
Confidence 344 45569999998777788999997653 33568899999999855522 566888888777889999999998884
Q ss_pred HhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-------------------------------------------
Q 005693 470 TLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMG------------------------------------------- 506 (682)
Q Consensus 470 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~------------------------------------------- 506 (682)
... .+ ...++.++++.++.||+..
T Consensus 104 --~~~--------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (264)
T 1nd4_A 104 --SSH--------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAEL 170 (264)
T ss_dssp --TSC--------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHH
T ss_pred --cCc--------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHH
Confidence 211 11 2356777888888888643
Q ss_pred ------------CCCcEecCCCCCCeEecCCCCeEEeecCCCC
Q 005693 507 ------------GPKFTHGNIKASNVLINQDLDGCISDFGLTP 537 (682)
Q Consensus 507 ------------~~~ivHrDLk~~NILl~~~~~~kl~DfGla~ 537 (682)
.+.++|+|++|.||++++++.+.|+|||.+.
T Consensus 171 ~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 171 FARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp HHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred HHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 1129999999999999887667799999864
No 393
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.04 E-value=1.7e-12 Score=142.49 Aligned_cols=137 Identities=20% Similarity=0.222 Sum_probs=106.7
Q ss_pred CeEEEEEeCCCccccc----CCccccCCCCCCcEEEccCCCCCCCC-----CCcCCCCCCCcEEeecccccCCc----CC
Q 005693 116 TRVFGLRLPGIGLVGP----IPNNTLGKLDALEVLSLRSNVLTGGL-----PSEITSLPSLRYLYLQHNNFSGK----IP 182 (682)
Q Consensus 116 ~~v~~l~l~~~~l~g~----lp~~~~~~l~~L~~L~L~~N~l~g~~-----p~~~~~l~~L~~L~L~~N~l~g~----~p 182 (682)
.++..|+|++|++++. ++. .+..+++|++|+|++|.+++.- +..+..+++|++|+|++|++++. ++
T Consensus 199 ~~L~~L~L~~n~l~~~~~~~l~~-~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~ 277 (461)
T 1z7x_W 199 CQLEALKLESCGVTSDNCRDLCG-IVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLC 277 (461)
T ss_dssp CCCCEEECTTSCCBTTHHHHHHH-HHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHH
T ss_pred CCceEEEccCCCCcHHHHHHHHH-HHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHH
Confidence 3788999999998863 455 6788999999999999987532 33344689999999999999864 45
Q ss_pred CCcc--cccceeecccccCcccCCcchhhh-----ccccceeccCCcccCC----CCCC--CCCCCCeEEecccCCCCCC
Q 005693 183 SSFS--PQLVVLDLSFNSFTGNIPQSIQNL-----TQLTGLSLQSNNLSGS----IPNF--DIPKLRHLNLSYNGLKGSI 249 (682)
Q Consensus 183 ~~~~--~~L~~L~ls~N~l~g~~p~~~~~l-----~~L~~L~l~~N~l~g~----~p~~--~l~~L~~l~ls~N~l~g~~ 249 (682)
..+. ++|++|+|++|++++..+..+... ++|+.|+|++|.+++. ++.. .+++|+.|+|++|++++..
T Consensus 278 ~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~ 357 (461)
T 1z7x_W 278 RVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAG 357 (461)
T ss_dssp HHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHH
T ss_pred HHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCcccccc
Confidence 5544 789999999999987766666654 6999999999999865 2332 6789999999999998654
Q ss_pred Cccc
Q 005693 250 PSSL 253 (682)
Q Consensus 250 p~~~ 253 (682)
+..+
T Consensus 358 ~~~l 361 (461)
T 1z7x_W 358 VREL 361 (461)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4433
No 394
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=99.03 E-value=1.3e-12 Score=131.49 Aligned_cols=159 Identities=19% Similarity=0.188 Sum_probs=117.5
Q ss_pred CcceEEecCCCCeEEEEEeCC---CcccccCCccccCCCCCCcEEEccCCCCCCCCCC-cCCCCCCCcE--EeecccccC
Q 005693 105 SWVGINCTQDRTRVFGLRLPG---IGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPS-EITSLPSLRY--LYLQHNNFS 178 (682)
Q Consensus 105 ~w~gv~C~~~~~~v~~l~l~~---~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~-~~~~l~~L~~--L~L~~N~l~ 178 (682)
+|.|+.|+.++.+|+.+...+ ..+.|.++++.+..|+. .|...+|..++.++- .+...+.|.. ++++.|+..
T Consensus 79 ~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~--~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N~~~ 156 (267)
T 3rw6_A 79 AVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKL--IMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNRRS 156 (267)
T ss_dssp HTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHH--HHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTTSHH
T ss_pred hcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHH--HHHhccchhccccCHHHcCCCcchhhcCccccCCHHH
Confidence 799999998766777666655 46667777656555554 566667777766663 3667777776 788888644
Q ss_pred CcCCCCc------ccccceeecccccCcc--cCCcchhhhccccceeccCCcccCCCCCCCCC--CCCeEEecccCCCCC
Q 005693 179 GKIPSSF------SPQLVVLDLSFNSFTG--NIPQSIQNLTQLTGLSLQSNNLSGSIPNFDIP--KLRHLNLSYNGLKGS 248 (682)
Q Consensus 179 g~~p~~~------~~~L~~L~ls~N~l~g--~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~l~--~L~~l~ls~N~l~g~ 248 (682)
.++..+ .++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++.-.-..+. +|+.|+|++|.+++.
T Consensus 157 -~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~~~l~~l~~l~L~~L~L~~Npl~~~ 235 (267)
T 3rw6_A 157 -CMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLCDT 235 (267)
T ss_dssp -HHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSGGGGGGGTTSCCSEEECTTSTTGGG
T ss_pred -HHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCchhhhhcccCCcceEEccCCcCccc
Confidence 333322 1689999999999998 56788899999999999999999752212233 999999999999988
Q ss_pred CCc-------cccCCCCCCCCCCCC
Q 005693 249 IPS-------SLQKFPNSSFVGNSL 266 (682)
Q Consensus 249 ~p~-------~~~~l~~l~~~~n~~ 266 (682)
+|. .+..+++|..++...
T Consensus 236 ~~~~~~y~~~il~~~P~L~~LDg~~ 260 (267)
T 3rw6_A 236 FRDQSTYISAIRERFPKLLRLDGHE 260 (267)
T ss_dssp CSSHHHHHHHHHHHCTTCCEESSCB
T ss_pred cCcchhHHHHHHHHCcccCeECCcC
Confidence 773 367889998888543
No 395
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.95 E-value=2.2e-09 Score=113.79 Aligned_cols=140 Identities=15% Similarity=0.226 Sum_probs=104.9
Q ss_pred ccccccCeEEEEEEEEcCCceEEEEEee--ccc--cChhhHHHHHHHHHHhcC-CCceeceEEEEEec---CceEEEEee
Q 005693 391 EVLGKGSYGTAYKAVLEESTTVVVKRLK--EVV--VGKRDFEQQMEIVGRVGQ-HPNVVPLRAYYYSK---DEKLLVYDY 462 (682)
Q Consensus 391 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~--~~~--~~~~~~~~e~~~l~~l~~-h~niv~l~~~~~~~---~~~~lV~e~ 462 (682)
+.++.|.++.||+.... +..+++|+.. ... .....+.+|..++..+.+ +..++++++++.+. +..++||||
T Consensus 44 ~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme~ 122 (359)
T 3dxp_A 44 EQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEF 122 (359)
T ss_dssp EECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEEC
T ss_pred EEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEEe
Confidence 46888999999998865 4678888775 322 234578899999999954 45688899888766 347999999
Q ss_pred ccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC------------------------------------
Q 005693 463 FASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMG------------------------------------ 506 (682)
Q Consensus 463 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~------------------------------------ 506 (682)
++|..+.+.. ...++..++..++.++++.|+.||+..
T Consensus 123 v~G~~l~~~~-------~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (359)
T 3dxp_A 123 VSGRVLWDQS-------LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIP 195 (359)
T ss_dssp CCCBCCCCTT-------CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCH
T ss_pred cCCeecCCCc-------cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCCh
Confidence 9997774321 122678888999999999999999731
Q ss_pred -------------------CCCcEecCCCCCCeEecCCCC--eEEeecCCCCC
Q 005693 507 -------------------GPKFTHGNIKASNVLINQDLD--GCISDFGLTPL 538 (682)
Q Consensus 507 -------------------~~~ivHrDLk~~NILl~~~~~--~kl~DfGla~~ 538 (682)
.+.++|+|+++.||++++++. +.|+||+.+..
T Consensus 196 ~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 196 AMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 245899999999999997753 68999998754
No 396
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.86 E-value=1.4e-09 Score=112.45 Aligned_cols=183 Identities=16% Similarity=0.199 Sum_probs=120.9
Q ss_pred ccccccCeEEEEEEEEcCCceEEEEEeeccccChhhHHHHHHHHHHhcCCCc--eeceEEEEEecC---ceEEEEeeccC
Q 005693 391 EVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPN--VVPLRAYYYSKD---EKLLVYDYFAS 465 (682)
Q Consensus 391 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~n--iv~l~~~~~~~~---~~~lV~e~~~~ 465 (682)
+.++.|.+..||+.. ..+++|+.... .....+.+|.+++..+..+.. +.+++......+ ..|+|||+++|
T Consensus 26 ~~~~~G~~n~v~~v~----~~~vlR~~~~~-~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~G 100 (304)
T 3sg8_A 26 EISGEGNDCIAYEIN----RDFIFKFPKHS-RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIKG 100 (304)
T ss_dssp CEEEECSSEEEEEST----TSEEEEEESSH-HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCCC
T ss_pred EecCCCCcceEEEEC----CEEEEEecCCc-chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccCC
Confidence 458899999999863 56888886432 234578899999998855433 344554443333 34789999999
Q ss_pred CchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC---------------------------------------
Q 005693 466 GSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMG--------------------------------------- 506 (682)
Q Consensus 466 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~--------------------------------------- 506 (682)
..+.+... ..++.+++..++.+++..++.||+..
T Consensus 101 ~~l~~~~~-------~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 173 (304)
T 3sg8_A 101 VPLTPLLL-------NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKV 173 (304)
T ss_dssp EECCHHHH-------HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHH
T ss_pred eECCcccc-------ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHH
Confidence 88865432 12677788888899999898888621
Q ss_pred ----------------CCCcEecCCCCCCeEecC--CCCeEEeecCCCCCCCCCCCCCCCCcc---cCcccccc-----C
Q 005693 507 ----------------GPKFTHGNIKASNVLINQ--DLDGCISDFGLTPLMNVPATPSRSAGY---RAPEVIET-----R 560 (682)
Q Consensus 507 ----------------~~~ivHrDLk~~NILl~~--~~~~kl~DfGla~~~~~~~~~~~~~~y---~aPE~~~~-----~ 560 (682)
.+.++|+|+++.||++++ ...+.|+||+.+..............+ ..|+.... +
T Consensus 174 ~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~ 253 (304)
T 3sg8_A 174 DDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYK 253 (304)
T ss_dssp HHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHT
T ss_pred HHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcC
Confidence 134799999999999998 456789999987653221100000000 11221100 0
Q ss_pred C---------CCCcchHHHHHHHHHHHHhCCCCC
Q 005693 561 K---------HSHKSDVYSFGVLLLEMLTGKAPL 585 (682)
Q Consensus 561 ~---------~~~~sDvwS~Gvvl~elltg~~Pf 585 (682)
. .....+.|+++.++|.+.+|..+|
T Consensus 254 ~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 254 HKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 0 112358999999999999998776
No 397
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.81 E-value=8e-11 Score=125.43 Aligned_cols=133 Identities=17% Similarity=0.183 Sum_probs=92.5
Q ss_pred CeEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcC-----CCCCCCcEEeecccccCCc----CCCCcc
Q 005693 116 TRVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEI-----TSLPSLRYLYLQHNNFSGK----IPSSFS 186 (682)
Q Consensus 116 ~~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~-----~~l~~L~~L~L~~N~l~g~----~p~~~~ 186 (682)
.++..|+|++|+++..-.......+.+|+.|+|++|+|+..-...+ ...++|+.|+|++|.|+.. ++..+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 4788899999987643222223456778999999998874433333 3467899999999988742 222222
Q ss_pred --cccceeecccccCccc----CCcchhhhccccceeccCCcccCCCC----CC--CCCCCCeEEecccCCCCC
Q 005693 187 --PQLVVLDLSFNSFTGN----IPQSIQNLTQLTGLSLQSNNLSGSIP----NF--DIPKLRHLNLSYNGLKGS 248 (682)
Q Consensus 187 --~~L~~L~ls~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~g~~p----~~--~l~~L~~l~ls~N~l~g~ 248 (682)
++|++|+|++|+|+.. ++..+..+++|+.|+|++|+|+..-. .. ..++|+.|+|++|.|+..
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~ 254 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSE 254 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHH
T ss_pred cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHH
Confidence 6789999999998753 35567778889999999998874221 11 457889999999988753
No 398
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.80 E-value=6.2e-09 Score=108.91 Aligned_cols=141 Identities=18% Similarity=0.191 Sum_probs=86.5
Q ss_pred eEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeeccccc----CCcCCCCc-------
Q 005693 117 RVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNF----SGKIPSSF------- 185 (682)
Q Consensus 117 ~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l----~g~~p~~~------- 185 (682)
+++.|+|++ +++ .|++.+|.++++|+.|+|++|.+...-+..|.++.+|..|.+..+.. ...-+..|
T Consensus 102 ~L~~l~L~~-~i~-~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~ 179 (329)
T 3sb4_A 102 TLEKVILSE-KIK-NIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLE 179 (329)
T ss_dssp TCCC-CBCT-TCC-EECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCE
T ss_pred CCcEEECCc-ccc-chhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccc
Confidence 467788887 666 67777888888888888888887644445566655555555444211 00000000
Q ss_pred ---------------------------------------------ccccceeecccccCcccCCcchhhhccccceeccC
Q 005693 186 ---------------------------------------------SPQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQS 220 (682)
Q Consensus 186 ---------------------------------------------~~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~ 220 (682)
.++|+.|+|++|+++...+.+|.+|++|+.|+|.+
T Consensus 180 ~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~ 259 (329)
T 3sb4_A 180 TTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPH 259 (329)
T ss_dssp EEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCT
T ss_pred eeEEecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCc
Confidence 24677777777777755556677777777777777
Q ss_pred CcccCCCCCC---CCCCCC-eEEecccCCCCCCCccccCCCCCCCC
Q 005693 221 NNLSGSIPNF---DIPKLR-HLNLSYNGLKGSIPSSLQKFPNSSFV 262 (682)
Q Consensus 221 N~l~g~~p~~---~l~~L~-~l~ls~N~l~g~~p~~~~~l~~l~~~ 262 (682)
| ++. ++.. ++++|+ .+++.+ +++..-+..|.++++|+.+
T Consensus 260 n-i~~-I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l 302 (329)
T 3sb4_A 260 N-LKT-IGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYV 302 (329)
T ss_dssp T-CCE-ECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEE
T ss_pred c-cce-ehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEE
Confidence 6 543 3331 666777 777766 5554444566666666544
No 399
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.75 E-value=5.4e-09 Score=109.37 Aligned_cols=131 Identities=13% Similarity=0.170 Sum_probs=93.8
Q ss_pred cCCccccCC--------CCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecccccCCcCCCCccc--ccceeecccccC-
Q 005693 131 PIPNNTLGK--------LDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFSP--QLVVLDLSFNSF- 199 (682)
Q Consensus 131 ~lp~~~~~~--------l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~--~L~~L~ls~N~l- 199 (682)
.||+..|.+ +++|+.|+|.+ +++..-+..|.+|++|+.|+|++|.++...+..|.. ++..+.++.+..
T Consensus 83 ~I~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~ 161 (329)
T 3sb4_A 83 FVPAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAY 161 (329)
T ss_dssp EECTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHH
T ss_pred ccCHHHhcccccccccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhh
Confidence 567778888 99999999999 888555677999999999999999998555566653 444554444211
Q ss_pred ---c----------------------ccCCcc---------------------------h-hhhccccceeccCCcccCC
Q 005693 200 ---T----------------------GNIPQS---------------------------I-QNLTQLTGLSLQSNNLSGS 226 (682)
Q Consensus 200 ---~----------------------g~~p~~---------------------------~-~~l~~L~~L~l~~N~l~g~ 226 (682)
. +.++.. + ..+++|+.|+|++|+++..
T Consensus 162 ~~~~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I 241 (329)
T 3sb4_A 162 RFKNRWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTI 241 (329)
T ss_dssp HTSTTTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEE
T ss_pred hccccccccccccccccceeEEecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCccee
Confidence 0 000000 0 1378999999999999844
Q ss_pred CCCC--CCCCCCeEEecccCCCCCCCccccCCCCCC-CCC
Q 005693 227 IPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSS-FVG 263 (682)
Q Consensus 227 ~p~~--~l~~L~~l~ls~N~l~g~~p~~~~~l~~l~-~~~ 263 (682)
.+.. .+++|+.|+|++| ++..-+..|.++++|+ .+.
T Consensus 242 ~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~ 280 (329)
T 3sb4_A 242 PDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLE 280 (329)
T ss_dssp CTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEE
T ss_pred cHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEE
Confidence 3332 8999999999998 7755556788888887 443
No 400
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.71 E-value=5.9e-11 Score=126.44 Aligned_cols=146 Identities=22% Similarity=0.246 Sum_probs=103.7
Q ss_pred eEEEEEeCCCcccccCCccccC-----CCCCCcEEEccCCCCCCCCCCcC-CCCCCCcEEeecccccCCcCCCCcc----
Q 005693 117 RVFGLRLPGIGLVGPIPNNTLG-----KLDALEVLSLRSNVLTGGLPSEI-TSLPSLRYLYLQHNNFSGKIPSSFS---- 186 (682)
Q Consensus 117 ~v~~l~l~~~~l~g~lp~~~~~-----~l~~L~~L~L~~N~l~g~~p~~~-~~l~~L~~L~L~~N~l~g~~p~~~~---- 186 (682)
.+..|+|++|+++..-.. .+. +..+|+.|+|++|.|+..-...+ ..+++|+.|+|++|+|+......+.
T Consensus 73 ~L~~L~Ls~n~l~~~~~~-~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 73 SLRQLNLAGVRMTPVKCT-VVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TCCEEECTTSCCCHHHHH-HHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hCCEEEecCCCCCHHHHH-HHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 577899999998742221 232 33799999999999975433333 3578999999999999854333331
Q ss_pred ---cccceeecccccCccc----CCcchhhhccccceeccCCcccCCC----CC--CCCCCCCeEEecccCCCCC----C
Q 005693 187 ---PQLVVLDLSFNSFTGN----IPQSIQNLTQLTGLSLQSNNLSGSI----PN--FDIPKLRHLNLSYNGLKGS----I 249 (682)
Q Consensus 187 ---~~L~~L~ls~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~g~~----p~--~~l~~L~~l~ls~N~l~g~----~ 249 (682)
++|++|+|++|+|+.. ++..+..+++|+.|+|++|+|+..- +. ...++|+.|+|++|.++.. +
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l 231 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALAL 231 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHH
Confidence 5799999999999853 5556678999999999999998422 21 1567899999999999752 3
Q ss_pred CccccCCCCCCCCC
Q 005693 250 PSSLQKFPNSSFVG 263 (682)
Q Consensus 250 p~~~~~l~~l~~~~ 263 (682)
+..+...++|..++
T Consensus 232 ~~~L~~~~~L~~L~ 245 (372)
T 3un9_A 232 ARAAREHPSLELLH 245 (372)
T ss_dssp HHHHHHCSSCCEEE
T ss_pred HHHHHhCCCCCEEe
Confidence 33343344444443
No 401
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.56 E-value=1.5e-09 Score=122.99 Aligned_cols=131 Identities=15% Similarity=0.110 Sum_probs=68.3
Q ss_pred eEEEEEeCCCcccccCCccccCC-CCCCcEEEcc----CCCCCCC-----CCCcCCCCCCCcEEeeccc--ccCCcCCCC
Q 005693 117 RVFGLRLPGIGLVGPIPNNTLGK-LDALEVLSLR----SNVLTGG-----LPSEITSLPSLRYLYLQHN--NFSGKIPSS 184 (682)
Q Consensus 117 ~v~~l~l~~~~l~g~lp~~~~~~-l~~L~~L~L~----~N~l~g~-----~p~~~~~l~~L~~L~L~~N--~l~g~~p~~ 184 (682)
++..|++..+++++..+. .++. +++|+.|+|+ .|++++. ++..+.++++|+.|+|++| .+++..+..
T Consensus 379 ~L~~L~l~~~~l~~~~~~-~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~ 457 (592)
T 3ogk_B 379 ELEYMAVYVSDITNESLE-SIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSY 457 (592)
T ss_dssp TCSEEEEEESCCCHHHHH-HHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHH
T ss_pred cCeEEEeecCCccHHHHH-HHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHH
Confidence 344555555555544333 2332 5556666664 4555532 2223445566666666532 244333322
Q ss_pred cc---cccceeecccccCcc-cCCcchhhhccccceeccCCcccCC-CCCC--CCCCCCeEEecccCCCCC
Q 005693 185 FS---PQLVVLDLSFNSFTG-NIPQSIQNLTQLTGLSLQSNNLSGS-IPNF--DIPKLRHLNLSYNGLKGS 248 (682)
Q Consensus 185 ~~---~~L~~L~ls~N~l~g-~~p~~~~~l~~L~~L~l~~N~l~g~-~p~~--~l~~L~~l~ls~N~l~g~ 248 (682)
+. ++|++|+|++|++++ .++..+.++++|+.|+|++|.+++. ++.. .+++|+.|+|++|++++.
T Consensus 458 ~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~ 528 (592)
T 3ogk_B 458 IGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMT 528 (592)
T ss_dssp HHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTT
T ss_pred HHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHH
Confidence 22 456666666666665 3344445666666666666666533 2221 456666666666666643
No 402
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.48 E-value=4.8e-09 Score=105.44 Aligned_cols=76 Identities=28% Similarity=0.461 Sum_probs=45.3
Q ss_pred CCCCCCcEEeecccccCC--cCCCCcc--cccceeecccccCcccCCcchhhhc--cccceeccCCcccCCCCCC-----
Q 005693 162 TSLPSLRYLYLQHNNFSG--KIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLT--QLTGLSLQSNNLSGSIPNF----- 230 (682)
Q Consensus 162 ~~l~~L~~L~L~~N~l~g--~~p~~~~--~~L~~L~ls~N~l~g~~p~~~~~l~--~L~~L~l~~N~l~g~~p~~----- 230 (682)
.++++|+.|+|++|+|++ .+|..+. ++|+.|+|++|+|++. ..+..++ +|+.|+|++|.+++.+|..
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~ 244 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYIS 244 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHH
Confidence 345666666666666665 3333332 5666666666666654 3344444 6777777777777666531
Q ss_pred ----CCCCCCeEE
Q 005693 231 ----DIPKLRHLN 239 (682)
Q Consensus 231 ----~l~~L~~l~ 239 (682)
.+++|+.||
T Consensus 245 ~il~~~P~L~~LD 257 (267)
T 3rw6_A 245 AIRERFPKLLRLD 257 (267)
T ss_dssp HHHHHCTTCCEES
T ss_pred HHHHHCcccCeEC
Confidence 566676665
No 403
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.45 E-value=9.5e-07 Score=89.23 Aligned_cols=135 Identities=16% Similarity=0.166 Sum_probs=97.7
Q ss_pred cccccCeE-EEEEEEEc-CCceEEEEEeeccccChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccCCchh
Q 005693 392 VLGKGSYG-TAYKAVLE-ESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSLS 469 (682)
Q Consensus 392 ~lG~G~fg-~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~L~ 469 (682)
.+..|..| .||+.... ++..+++|+-... ...++.+|...+..+..+--|.++++++.+.+..++|||+++|.++.
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~--~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~ 108 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS--VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAF 108 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH--HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHH
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC--CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcccc
Confidence 34445554 68987754 4567888886543 24568889999999876666888999999999999999999998887
Q ss_pred HhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc--------------------------------------------
Q 005693 470 TLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSM-------------------------------------------- 505 (682)
Q Consensus 470 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~-------------------------------------------- 505 (682)
+..... ......++.+++..++.||..
T Consensus 109 ~~~~~~---------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (272)
T 4gkh_A 109 QVLEEY---------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQV 179 (272)
T ss_dssp HHHHHC---------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHH
T ss_pred ccccCC---------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHH
Confidence 665321 122334556666666666642
Q ss_pred -----------CCCCcEecCCCCCCeEecCCCCeEEeecCCCC
Q 005693 506 -----------GGPKFTHGNIKASNVLINQDLDGCISDFGLTP 537 (682)
Q Consensus 506 -----------~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~ 537 (682)
..+.++|+|+.+.|||+++++.+-|+||+.+.
T Consensus 180 ~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 180 WKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp HHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 01127899999999999988777899998764
No 404
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.45 E-value=7.7e-07 Score=92.51 Aligned_cols=132 Identities=14% Similarity=0.177 Sum_probs=97.8
Q ss_pred ccccccCeEEEEEEEEcCCceEEEEEeeccccChhhHHHHHHHHHHhcC--C-CceeceEEEEEecCceEEEEeeccCCc
Q 005693 391 EVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQ--H-PNVVPLRAYYYSKDEKLLVYDYFASGS 467 (682)
Q Consensus 391 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~--h-~niv~l~~~~~~~~~~~lV~e~~~~g~ 467 (682)
+.++.|....||+. +..+++|+..... ....+.+|.+++..+.+ . ..+.+++++ +..++||||++|.+
T Consensus 43 ~~l~~G~~n~vy~v----g~~~vlR~~~~~~-~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme~i~G~~ 113 (320)
T 3r70_A 43 RYLSSGDDSDTFLC----NEQYVVKVPKRDS-VRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMKYIKGER 113 (320)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESSHH-HHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEECCCCBC
T ss_pred EeCCCCCCceEEEE----CCEEEEEeCCcHH-HHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEeecCCcc
Confidence 56889999999998 6678888764322 23468899999998843 1 234555554 56789999999988
Q ss_pred hhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC----------------------------------------
Q 005693 468 LSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGG---------------------------------------- 507 (682)
Q Consensus 468 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~---------------------------------------- 507 (682)
+.+... ..++..++..++.++++.++.||+...
T Consensus 114 l~~~~~-------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (320)
T 3r70_A 114 ITYEQY-------HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDEML 186 (320)
T ss_dssp CCHHHH-------TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHHHH
T ss_pred cccccc-------ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccccch
Confidence 864332 125677778888888888888885432
Q ss_pred --------------------CCcEecCCCCCCeEecCCCCeEEeecCCCCC
Q 005693 508 --------------------PKFTHGNIKASNVLINQDLDGCISDFGLTPL 538 (682)
Q Consensus 508 --------------------~~ivHrDLk~~NILl~~~~~~kl~DfGla~~ 538 (682)
+.++|+|+++.||+++++..+.|+||+.+..
T Consensus 187 ~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 187 EHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp HHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 1249999999999999976679999998754
No 405
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.42 E-value=6.8e-09 Score=99.04 Aligned_cols=111 Identities=14% Similarity=0.193 Sum_probs=78.8
Q ss_pred ccCCCCCCcEEEccCC-CCCCC----CCCcCCCCCCCcEEeecccccCCcCCCCcc------cccceeecccccCccc--
Q 005693 136 TLGKLDALEVLSLRSN-VLTGG----LPSEITSLPSLRYLYLQHNNFSGKIPSSFS------PQLVVLDLSFNSFTGN-- 202 (682)
Q Consensus 136 ~~~~l~~L~~L~L~~N-~l~g~----~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~------~~L~~L~ls~N~l~g~-- 202 (682)
.+...+.|++|+|++| .|... +...+...++|++|+|++|+|+..--..+. ++|++|+|++|+|+..
T Consensus 31 ~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~ 110 (185)
T 1io0_A 31 IQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGI 110 (185)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHH
T ss_pred HHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHH
Confidence 4677788888888888 77632 344566678888899998888642211221 5788999999988854
Q ss_pred --CCcchhhhccccceec--cCCcccCCCC----CC--CCCCCCeEEecccCCC
Q 005693 203 --IPQSIQNLTQLTGLSL--QSNNLSGSIP----NF--DIPKLRHLNLSYNGLK 246 (682)
Q Consensus 203 --~p~~~~~l~~L~~L~l--~~N~l~g~~p----~~--~l~~L~~l~ls~N~l~ 246 (682)
+...+...++|+.|+| ++|.|...-. .. ..++|++|+|++|.+.
T Consensus 111 ~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 111 LALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 4566777788999999 7788874211 11 4578899999988874
No 406
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.41 E-value=1.1e-08 Score=115.86 Aligned_cols=141 Identities=16% Similarity=0.105 Sum_probs=87.9
Q ss_pred eEEEEEeCCCc-ccc-cCCccccCCCCCCcEEEccCCCCCCC----CCCcCCCCCCCcEEeecccccCCcCCCCcc----
Q 005693 117 RVFGLRLPGIG-LVG-PIPNNTLGKLDALEVLSLRSNVLTGG----LPSEITSLPSLRYLYLQHNNFSGKIPSSFS---- 186 (682)
Q Consensus 117 ~v~~l~l~~~~-l~g-~lp~~~~~~l~~L~~L~L~~N~l~g~----~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~---- 186 (682)
++..|+|+++. ++. .++. ...++++|++|+|++|.+++. ++..+.++++|+.|+|++|.+++.-+..+.
T Consensus 139 ~L~~L~L~~~~~~~~~~l~~-~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~ 217 (592)
T 3ogk_B 139 DLETLKLDKCSGFTTDGLLS-IVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIAR 217 (592)
T ss_dssp GCCEEEEESCEEEEHHHHHH-HHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHH
T ss_pred cCcEEECcCCCCcCHHHHHH-HHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHh
Confidence 37888888775 221 1221 234778888888888888765 444456778888888888888743222221
Q ss_pred --cccceeecccccCcccCCcchhhhccccceeccCCcccCC---CCC--CCCCCCCeEEecccCCCCCCCccccCCCCC
Q 005693 187 --PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGS---IPN--FDIPKLRHLNLSYNGLKGSIPSSLQKFPNS 259 (682)
Q Consensus 187 --~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~---~p~--~~l~~L~~l~ls~N~l~g~~p~~~~~l~~l 259 (682)
++|++|+|++|.+++ +|..+.++++|+.|+++++..... .+. ..+++|+.|+++++.. +.+|..+..+++|
T Consensus 218 ~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~-~~l~~~~~~~~~L 295 (592)
T 3ogk_B 218 NCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGP-NEMPILFPFAAQI 295 (592)
T ss_dssp HCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCT-TTGGGGGGGGGGC
T ss_pred hCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccch-hHHHHHHhhcCCC
Confidence 678888888888885 677888888888888875332211 111 1455666666665432 2445444444444
Q ss_pred C
Q 005693 260 S 260 (682)
Q Consensus 260 ~ 260 (682)
+
T Consensus 296 ~ 296 (592)
T 3ogk_B 296 R 296 (592)
T ss_dssp C
T ss_pred c
Confidence 3
No 407
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.31 E-value=4.7e-06 Score=85.95 Aligned_cols=136 Identities=18% Similarity=0.197 Sum_probs=95.2
Q ss_pred ccccccCeEEEEEEEEcCCceEEEEEeeccccChhhHHHHHHHHHHhcCCC--ceeceEEEEE-ecCceEEEEeeccCCc
Q 005693 391 EVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHP--NVVPLRAYYY-SKDEKLLVYDYFASGS 467 (682)
Q Consensus 391 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~--niv~l~~~~~-~~~~~~lV~e~~~~g~ 467 (682)
+.++.|....||+. +..+++|+-.. ......+.+|.+++..+.+|- .|.+.+.+.. ..+..++||||++|..
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~~-~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~~ 99 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPKS-QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQI 99 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESS-HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSEE
T ss_pred eecCCCcceeEEEE----CCEEEEEecCC-chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCeE
Confidence 45788888899988 56788888532 122457889999999995542 3566777764 3456789999999988
Q ss_pred hhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-----------------------------------------
Q 005693 468 LSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMG----------------------------------------- 506 (682)
Q Consensus 468 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~----------------------------------------- 506 (682)
+.+.... .++..+...++.++++.|+.||+..
T Consensus 100 l~~~~~~-------~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l 172 (306)
T 3tdw_A 100 LGEDGMA-------VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYL 172 (306)
T ss_dssp CHHHHHT-------TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHH
T ss_pred Cchhhhh-------hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHH
Confidence 8763221 1455556666666666666666432
Q ss_pred ----------------CCCcEecCCCCCCeEecC---CCCe-EEeecCCCCC
Q 005693 507 ----------------GPKFTHGNIKASNVLINQ---DLDG-CISDFGLTPL 538 (682)
Q Consensus 507 ----------------~~~ivHrDLk~~NILl~~---~~~~-kl~DfGla~~ 538 (682)
.+.++|+|+++.||++++ ++.+ .|+||+.+..
T Consensus 173 ~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 173 TLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 224699999999999997 4554 7999987643
No 408
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.31 E-value=4.2e-06 Score=85.43 Aligned_cols=74 Identities=15% Similarity=0.198 Sum_probs=58.7
Q ss_pred ccccccCeEEEEEEEEcCCceEEEEEeeccc-cChhhHHHHHHHHHHhcCC--CceeceEEEEEecCceEEEEeeccCCc
Q 005693 391 EVLGKGSYGTAYKAVLEESTTVVVKRLKEVV-VGKRDFEQQMEIVGRVGQH--PNVVPLRAYYYSKDEKLLVYDYFASGS 467 (682)
Q Consensus 391 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~-~~~~~~~~e~~~l~~l~~h--~niv~l~~~~~~~~~~~lV~e~~~~g~ 467 (682)
+.||.|.++.||++...+|+.+++|+..... .....+..|++.+..+.++ ..+++++++. ..++||||++++.
T Consensus 21 ~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g~~ 96 (288)
T 3d1u_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDERP 96 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCCCC
T ss_pred eeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecccCC
Confidence 5689999999999998889999999965432 2346789999999999433 3577888763 4689999999986
Q ss_pred h
Q 005693 468 L 468 (682)
Q Consensus 468 L 468 (682)
+
T Consensus 97 ~ 97 (288)
T 3d1u_A 97 P 97 (288)
T ss_dssp C
T ss_pred C
Confidence 4
No 409
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.24 E-value=2.4e-06 Score=90.11 Aligned_cols=80 Identities=14% Similarity=0.139 Sum_probs=57.2
Q ss_pred ccc-cccCeEEEEEEEEc-------CCceEEEEEeeccc---c-ChhhHHHHHHHHHHhcCC--CceeceEEEEEec---
Q 005693 391 EVL-GKGSYGTAYKAVLE-------ESTTVVVKRLKEVV---V-GKRDFEQQMEIVGRVGQH--PNVVPLRAYYYSK--- 453 (682)
Q Consensus 391 ~~l-G~G~fg~Vy~~~~~-------~~~~vavK~l~~~~---~-~~~~~~~e~~~l~~l~~h--~niv~l~~~~~~~--- 453 (682)
+.| +.|....+|+.... ++..+++|+..... . ....+.+|..++..+..+ -.+.++++++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 456 78889999998754 25678888765432 1 235688999999988655 3577788887654
Q ss_pred CceEEEEeeccCCchhH
Q 005693 454 DEKLLVYDYFASGSLST 470 (682)
Q Consensus 454 ~~~~lV~e~~~~g~L~~ 470 (682)
...++||||++|..+.+
T Consensus 106 g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp SSCEEEEECCCCBCCCB
T ss_pred CCceEEEEecCCCChhh
Confidence 34689999999876653
No 410
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.17 E-value=4.2e-08 Score=110.95 Aligned_cols=122 Identities=18% Similarity=0.239 Sum_probs=55.0
Q ss_pred eEEEEEeCCCcccccCCccccC-CCCCCcEEEccCC-CCCCC-CCCcCCCCCCCcEEeecccccCCcCCCCcc------c
Q 005693 117 RVFGLRLPGIGLVGPIPNNTLG-KLDALEVLSLRSN-VLTGG-LPSEITSLPSLRYLYLQHNNFSGKIPSSFS------P 187 (682)
Q Consensus 117 ~v~~l~l~~~~l~g~lp~~~~~-~l~~L~~L~L~~N-~l~g~-~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~------~ 187 (682)
+++.|+|+++.+++..+. .+. .+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+. +
T Consensus 106 ~L~~L~L~~~~~~~~~~~-~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~ 184 (594)
T 2p1m_B 106 WLEEIRLKRMVVTDDCLE-LIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYT 184 (594)
T ss_dssp TCCEEEEESCBCCHHHHH-HHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCC
T ss_pred CCCeEEeeCcEEcHHHHH-HHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCC
Confidence 455555555555544333 232 4555555555555 33321 222233555555555555555543332221 3
Q ss_pred ccceeeccccc--Cccc-CCcchhhhccccceeccCC-cccCCCCCC--CCCCCCeEEe
Q 005693 188 QLVVLDLSFNS--FTGN-IPQSIQNLTQLTGLSLQSN-NLSGSIPNF--DIPKLRHLNL 240 (682)
Q Consensus 188 ~L~~L~ls~N~--l~g~-~p~~~~~l~~L~~L~l~~N-~l~g~~p~~--~l~~L~~l~l 240 (682)
+|++|+|++|. ++.. ++..+.++++|+.|+|++| .+.+ +|.. .+++|+.|++
T Consensus 185 ~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l 242 (594)
T 2p1m_B 185 SLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGT 242 (594)
T ss_dssp CCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEEC
T ss_pred cCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEccc
Confidence 55555555554 1110 1111233455555555555 2322 2221 4455555553
No 411
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.16 E-value=2.4e-08 Score=112.91 Aligned_cols=105 Identities=18% Similarity=0.105 Sum_probs=51.2
Q ss_pred CCCCcEEEccCCCCCCCCCCcCC-CCCCCcEEeec--c----cccCCcCCC--C----cc--cccceeecccccCcccCC
Q 005693 140 LDALEVLSLRSNVLTGGLPSEIT-SLPSLRYLYLQ--H----NNFSGKIPS--S----FS--PQLVVLDLSFNSFTGNIP 204 (682)
Q Consensus 140 l~~L~~L~L~~N~l~g~~p~~~~-~l~~L~~L~L~--~----N~l~g~~p~--~----~~--~~L~~L~ls~N~l~g~~p 204 (682)
+++|+.|+++.|++++..+..+. ++++|+.|+|+ + |++++ .|. . +. ++|+.|+|++ ++++..+
T Consensus 371 ~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~-~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~ 448 (594)
T 2p1m_B 371 CPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTL-EPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVF 448 (594)
T ss_dssp CTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTC-CCTHHHHHHHHHHCTTCCEEECCS-SCCHHHH
T ss_pred chhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccC-CchhhHHHHHHhhCCCccEEeecC-cccHHHH
Confidence 55566666655666544443443 35566666665 2 33431 111 0 10 4555555544 4544444
Q ss_pred cchhh-hccccceeccCCcccCCCCC---CCCCCCCeEEecccCCC
Q 005693 205 QSIQN-LTQLTGLSLQSNNLSGSIPN---FDIPKLRHLNLSYNGLK 246 (682)
Q Consensus 205 ~~~~~-l~~L~~L~l~~N~l~g~~p~---~~l~~L~~l~ls~N~l~ 246 (682)
..++. +++|+.|+|++|.+++.... ..+++|+.|+|++|.++
T Consensus 449 ~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~ 494 (594)
T 2p1m_B 449 EYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFG 494 (594)
T ss_dssp HHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCC
T ss_pred HHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCc
Confidence 44444 55555555555555432221 13455555555555553
No 412
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.14 E-value=1.1e-05 Score=85.19 Aligned_cols=74 Identities=8% Similarity=-0.026 Sum_probs=55.5
Q ss_pred ccccccCeEEEEEEEEcCCceEEEEEeeccccChhhHHHHHHHHHHhcCC-CceeceEEEEEec-CceEEEEeeccCCch
Q 005693 391 EVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQH-PNVVPLRAYYYSK-DEKLLVYDYFASGSL 468 (682)
Q Consensus 391 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h-~niv~l~~~~~~~-~~~~lV~e~~~~g~L 468 (682)
+.++.|....+|+... ++..+++|.... ...+..|..++..+..+ -.+.++++++... ...++||||++|..+
T Consensus 47 ~~l~gG~~n~~y~v~~-~g~~~vlK~~~~----~~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G~~l 121 (362)
T 3ovc_A 47 MQLSEGEESRAFSFDV-GGRGYVLRVNSC----ADGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGVTL 121 (362)
T ss_dssp EEEEECSSEEEEEEEE-TTEEEEEEEESC----CHHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCSEET
T ss_pred EECCCCCcceEEEEEE-CCcEEEEEeCCc----hhhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCCCCc
Confidence 4678899999999875 477888887643 23688999999998543 2356777777654 568999999998665
Q ss_pred h
Q 005693 469 S 469 (682)
Q Consensus 469 ~ 469 (682)
.
T Consensus 122 ~ 122 (362)
T 3ovc_A 122 Q 122 (362)
T ss_dssp T
T ss_pred c
Confidence 4
No 413
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.05 E-value=1.7e-07 Score=89.24 Aligned_cols=108 Identities=16% Similarity=0.209 Sum_probs=81.5
Q ss_pred CeEEEEEeCCC-ccccc----CCccccCCCCCCcEEEccCCCCCCC----CCCcCCCCCCCcEEeecccccCCc----CC
Q 005693 116 TRVFGLRLPGI-GLVGP----IPNNTLGKLDALEVLSLRSNVLTGG----LPSEITSLPSLRYLYLQHNNFSGK----IP 182 (682)
Q Consensus 116 ~~v~~l~l~~~-~l~g~----lp~~~~~~l~~L~~L~L~~N~l~g~----~p~~~~~l~~L~~L~L~~N~l~g~----~p 182 (682)
..++.|+|++| ++... +.. .+...++|++|+|++|.|... +...+...++|++|+|++|.|+.. +.
T Consensus 36 ~~L~~L~L~~n~~i~~~g~~~l~~-~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~ 114 (185)
T 1io0_A 36 PDLEEVNLNNIMNIPVPTLKACAE-ALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALV 114 (185)
T ss_dssp TTCCEEECTTCTTCCHHHHHHHHH-HHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHH
T ss_pred CCCCEEEecCCCCCCHHHHHHHHH-HHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHH
Confidence 56888999998 76531 222 467789999999999999732 344455668999999999999853 22
Q ss_pred CCcc--cccceeec--ccccCccc----CCcchhhhccccceeccCCccc
Q 005693 183 SSFS--PQLVVLDL--SFNSFTGN----IPQSIQNLTQLTGLSLQSNNLS 224 (682)
Q Consensus 183 ~~~~--~~L~~L~l--s~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~ 224 (682)
..+. ++|++|+| ++|.|+.. +...+...++|+.|+|++|.+.
T Consensus 115 ~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 115 EALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 3333 67999999 88999865 3445666689999999999986
No 414
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=98.03 E-value=8.5e-06 Score=87.34 Aligned_cols=96 Identities=16% Similarity=0.198 Sum_probs=51.3
Q ss_pred eEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecccccCCcCCCCcc--cccceeec
Q 005693 117 RVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDL 194 (682)
Q Consensus 117 ~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~--~~L~~L~l 194 (682)
.++.+.|++ ++. .|+...|.++.+|+.++|++|+++ .+|......++|+.+.|..| ++..-...|. ++|+.++|
T Consensus 158 ~L~~i~lp~-~l~-~I~~~aF~~c~~L~~l~l~~n~l~-~I~~~aF~~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l 233 (401)
T 4fdw_A 158 TVQEIVFPS-TLE-QLKEDIFYYCYNLKKADLSKTKIT-KLPASTFVYAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEI 233 (401)
T ss_dssp CCCEEECCT-TCC-EECSSTTTTCTTCCEEECTTSCCS-EECTTTTTTCCCSEEECCTT-CCEECTTTTTTCTTCCCEEC
T ss_pred CceEEEeCC-Ccc-EehHHHhhCcccCCeeecCCCcce-EechhhEeecccCEEEeCCc-hheehhhHhhCCCCCCEEec
Confidence 366666665 444 566667777777777777777776 44433223466666666533 4423233333 45555555
Q ss_pred ccccCcccCCcchhhhccccceec
Q 005693 195 SFNSFTGNIPQSIQNLTQLTGLSL 218 (682)
Q Consensus 195 s~N~l~g~~p~~~~~l~~L~~L~l 218 (682)
.+| ++..-..+|.+ .+|+.+.|
T Consensus 234 ~~~-l~~I~~~aF~~-~~L~~i~l 255 (401)
T 4fdw_A 234 PEN-VSTIGQEAFRE-SGITTVKL 255 (401)
T ss_dssp CTT-CCEECTTTTTT-CCCSEEEE
T ss_pred CCC-ccCcccccccc-CCccEEEe
Confidence 543 33233334444 44444444
No 415
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.01 E-value=1.2e-06 Score=92.53 Aligned_cols=60 Identities=22% Similarity=0.322 Sum_probs=29.8
Q ss_pred cccceeecccccCcccCCcchh---hhccccceeccCCcccCC----CCCC--CCCCCCeEEecccCCC
Q 005693 187 PQLVVLDLSFNSFTGNIPQSIQ---NLTQLTGLSLQSNNLSGS----IPNF--DIPKLRHLNLSYNGLK 246 (682)
Q Consensus 187 ~~L~~L~ls~N~l~g~~p~~~~---~l~~L~~L~l~~N~l~g~----~p~~--~l~~L~~l~ls~N~l~ 246 (682)
++|++|+|++|.+++..+..+. .+++|+.|+|+.|.|++. ++.. .+++|+.|+|++|.++
T Consensus 252 p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~ 320 (362)
T 2ra8_A 252 PNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLS 320 (362)
T ss_dssp TTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCC
T ss_pred CCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCC
Confidence 4555555555555543333332 355555555555555532 1111 3455555555555554
No 416
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=98.00 E-value=1.6e-05 Score=85.17 Aligned_cols=138 Identities=16% Similarity=0.145 Sum_probs=95.4
Q ss_pred eEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecccccCCcCCCCcc-cccceeecc
Q 005693 117 RVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS-PQLVVLDLS 195 (682)
Q Consensus 117 ~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~-~~L~~L~ls 195 (682)
+++.+.|+++ ++ .|+..+|.+ .+|+.++|.+ +++..-+..|.++++|+.++|++|+++..-...|. .+|+.+.|.
T Consensus 136 ~L~~i~l~~~-i~-~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~~~~L~~l~lp 211 (401)
T 4fdw_A 136 QIAKVVLNEG-LK-SIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFVYAGIEEVLLP 211 (401)
T ss_dssp CCSEEECCTT-CC-EECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTTTCCCSEEECC
T ss_pred CccEEEeCCC-cc-EECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEeecccCEEEeC
Confidence 4677777766 54 677777888 4699999885 67745567788999999999999988844444444 788999988
Q ss_pred cccCcccCCcchhhhccccceeccCCcccCCCCC--CCCCCCCeEEecccCCCCCCCccccCCCCCCCC
Q 005693 196 FNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPN--FDIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFV 262 (682)
Q Consensus 196 ~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~--~~l~~L~~l~ls~N~l~g~~p~~~~~l~~l~~~ 262 (682)
+| ++..-..+|.++++|+.|+|.+| ++ .++. +.-.+|+.++| .|+++..-+..|.++++|..+
T Consensus 212 ~~-l~~I~~~aF~~~~~L~~l~l~~~-l~-~I~~~aF~~~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l 276 (401)
T 4fdw_A 212 VT-LKEIGSQAFLKTSQLKTIEIPEN-VS-TIGQEAFRESGITTVKL-PNGVTNIASRAFYYCPELAEV 276 (401)
T ss_dssp TT-CCEECTTTTTTCTTCCCEECCTT-CC-EECTTTTTTCCCSEEEE-ETTCCEECTTTTTTCTTCCEE
T ss_pred Cc-hheehhhHhhCCCCCCEEecCCC-cc-CccccccccCCccEEEe-CCCccEEChhHhhCCCCCCEE
Confidence 44 77667778889999999998875 43 2332 22256777777 444553334556666665543
No 417
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.83 E-value=3.1e-05 Score=82.82 Aligned_cols=74 Identities=12% Similarity=0.194 Sum_probs=49.7
Q ss_pred ccccccCeEEEEEEEEc-CCceEEEEEeeccc--------cChhhHHHHHHHHHHhcCC-Cc-eeceEEEEEecCceEEE
Q 005693 391 EVLGKGSYGTAYKAVLE-ESTTVVVKRLKEVV--------VGKRDFEQQMEIVGRVGQH-PN-VVPLRAYYYSKDEKLLV 459 (682)
Q Consensus 391 ~~lG~G~fg~Vy~~~~~-~~~~vavK~l~~~~--------~~~~~~~~e~~~l~~l~~h-~n-iv~l~~~~~~~~~~~lV 459 (682)
+.||.|.++.||++... +++.+++|...... .....+..|.+++..+..+ +. +.+++.+ +.+..++|
T Consensus 36 ~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~lv 113 (397)
T 2olc_A 36 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVTV 113 (397)
T ss_dssp EECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEEE
T ss_pred EECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEEE
Confidence 56899999999999754 46789999764321 1234567888898887543 33 4455543 45567899
Q ss_pred EeeccCC
Q 005693 460 YDYFASG 466 (682)
Q Consensus 460 ~e~~~~g 466 (682)
|||+++.
T Consensus 114 mE~l~g~ 120 (397)
T 2olc_A 114 MEDLSHL 120 (397)
T ss_dssp ECCCTTS
T ss_pred EEeCCCc
Confidence 9999764
No 418
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.78 E-value=7e-05 Score=77.96 Aligned_cols=143 Identities=15% Similarity=0.226 Sum_probs=79.5
Q ss_pred ccccccCeEEEEEEEEcCCceEEEEEeeccccChhhHHHHHHHHHHhcCC-CceeceEE------EEEecCceEEEEeec
Q 005693 391 EVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQH-PNVVPLRA------YYYSKDEKLLVYDYF 463 (682)
Q Consensus 391 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h-~niv~l~~------~~~~~~~~~lV~e~~ 463 (682)
+.|+.|..+.||+....++ .+++|+... ...+...|.+++..+.++ -.+++++. +....+..++||||+
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~---~~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~i 113 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHR---PEKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDWI 113 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECS---CHHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEECC
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCC---CHHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEee
Confidence 3466677889999987654 588888865 234455566666655321 12334432 123456778999999
Q ss_pred cCCchh--------------HhhccC-CC---C-CC----CCCCHHHH-------------------------------H
Q 005693 464 ASGSLS--------------TLLHGN-RG---A-GR----TPLDWETR-------------------------------V 489 (682)
Q Consensus 464 ~~g~L~--------------~~l~~~-~~---~-~~----~~l~~~~~-------------------------------~ 489 (682)
+|..+. ..+|.. .. . .. ..-.|... .
T Consensus 114 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 193 (346)
T 2q83_A 114 EGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEID 193 (346)
T ss_dssp CCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred cCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHH
Confidence 986442 111110 00 0 00 01123211 0
Q ss_pred HHHHHHHHHHHHHHh--------c--CCCCcEecCCCCCCeEecCCCCeEEeecCCCC
Q 005693 490 KILLGTARGVAHIHS--------M--GGPKFTHGNIKASNVLINQDLDGCISDFGLTP 537 (682)
Q Consensus 490 ~i~~~ia~gl~~LH~--------~--~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~ 537 (682)
.+..++..++.+|+. . ..+.++|+|+++.||+++.++.+.|+||+.+.
T Consensus 194 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 194 GFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 111123345666653 1 23459999999999999888899999998653
No 419
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.77 E-value=0.00011 Score=75.71 Aligned_cols=140 Identities=17% Similarity=0.151 Sum_probs=91.4
Q ss_pred ccccccCeEEEEEEEEcCCceEEEEEeeccccChhhHHHHHHHHHHhcCC--CceeceEEEEEecCceEEEEeeccCCch
Q 005693 391 EVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQH--PNVVPLRAYYYSKDEKLLVYDYFASGSL 468 (682)
Q Consensus 391 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h--~niv~l~~~~~~~~~~~lV~e~~~~g~L 468 (682)
+.|+.|.+..+|+... ++..+++|+.... ....+..|.+.+..+..+ ..+++++++....+..++||||+++..+
T Consensus 42 ~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~--~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~~ 118 (312)
T 3jr1_A 42 EKLYSGEMNEIWLIND-EVQTVFVKINERS--YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSKN 118 (312)
T ss_dssp EEECCSSSSEEEEEES-SSCEEEEEEEEGG--GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCCC
T ss_pred EEeCCccceeeeEEEE-CCCeEEEEeCCcc--cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCCC
Confidence 4578899999999875 4678888887543 256788999999888543 6788899988888889999999998754
Q ss_pred hH-----------hhccCCC-CC----------------CCCCCHHHHH---HHHH----------------HHHHH-HH
Q 005693 469 ST-----------LLHGNRG-AG----------------RTPLDWETRV---KILL----------------GTARG-VA 500 (682)
Q Consensus 469 ~~-----------~l~~~~~-~~----------------~~~l~~~~~~---~i~~----------------~ia~g-l~ 500 (682)
.. .++.... .. .-.-+|.+.. ++.. .+... ..
T Consensus 119 ~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l~~ 198 (312)
T 3jr1_A 119 KQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIVAD 198 (312)
T ss_dssp CTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHH
Confidence 21 2222211 00 0012454321 1111 11111 12
Q ss_pred HHHh-cCCCCcEecCCCCCCeEecCCCCeEEeecC
Q 005693 501 HIHS-MGGPKFTHGNIKASNVLINQDLDGCISDFG 534 (682)
Q Consensus 501 ~LH~-~~~~~ivHrDLk~~NILl~~~~~~kl~DfG 534 (682)
.|.. ...+.++|+|+.+.|++++.++ +.|+||.
T Consensus 199 ~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 199 TLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 3322 2246699999999999999887 8899974
No 420
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=97.66 E-value=5.4e-06 Score=87.43 Aligned_cols=126 Identities=19% Similarity=0.288 Sum_probs=82.3
Q ss_pred eEEEEEeCCCcccccCCcccc--CCCCCCcEEEccC--CCCCCC-----CCCcC--CCCCCCcEEeecccccCCcCCCCc
Q 005693 117 RVFGLRLPGIGLVGPIPNNTL--GKLDALEVLSLRS--NVLTGG-----LPSEI--TSLPSLRYLYLQHNNFSGKIPSSF 185 (682)
Q Consensus 117 ~v~~l~l~~~~l~g~lp~~~~--~~l~~L~~L~L~~--N~l~g~-----~p~~~--~~l~~L~~L~L~~N~l~g~~p~~~ 185 (682)
++..|+|..+++....-. .+ ..+++|++|+|+. |...|. +...+ ..+++|++|+|++|.+++..+..+
T Consensus 194 ~L~~L~L~~~~l~~~~l~-~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~l 272 (362)
T 2ra8_A 194 NLKSLEIISGGLPDSVVE-DILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMF 272 (362)
T ss_dssp TCSEEEEECSBCCHHHHH-HHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHH
T ss_pred CCcEEEEecCCCChHHHH-HHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHH
Confidence 466666666655432111 23 3789999999863 222221 11122 357999999999999875332222
Q ss_pred -----ccccceeecccccCccc----CCcchhhhccccceeccCCcccCCCCCCCCCC--CCeEEecccC
Q 005693 186 -----SPQLVVLDLSFNSFTGN----IPQSIQNLTQLTGLSLQSNNLSGSIPNFDIPK--LRHLNLSYNG 244 (682)
Q Consensus 186 -----~~~L~~L~ls~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~g~~p~~~l~~--L~~l~ls~N~ 244 (682)
.++|++|+|+.|.|++. ++..+.++++|+.|+|++|.|+...-. .+.. ...+++++|+
T Consensus 273 a~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~-~l~~alg~~~~~~~~~ 341 (362)
T 2ra8_A 273 LESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKK-ELQKSLPMKIDVSDSQ 341 (362)
T ss_dssp HHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHH-HHHHHCCSEEECCSBC
T ss_pred HhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHH-HHHHHcCCEEEecCCc
Confidence 37899999999999874 556667899999999999998742111 1111 3568888887
No 421
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.61 E-value=0.00039 Score=70.66 Aligned_cols=73 Identities=16% Similarity=0.217 Sum_probs=54.4
Q ss_pred ccccccCeEEEEEEEEcCCceEEEEEeecccc-ChhhHHHHHHHHHHhcCCC--ceeceEEEEEecCceEEEEeeccCCc
Q 005693 391 EVLGKGSYGTAYKAVLEESTTVVVKRLKEVVV-GKRDFEQQMEIVGRVGQHP--NVVPLRAYYYSKDEKLLVYDYFASGS 467 (682)
Q Consensus 391 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~-~~~~~~~e~~~l~~l~~h~--niv~l~~~~~~~~~~~lV~e~~~~g~ 467 (682)
+.+|.|..+.||+....+|+.+++|+-..... ....|+.|.+.++.+.+.. .+++++++ +..++||||++++.
T Consensus 21 ~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~----~~~~lv~e~l~~~~ 96 (288)
T 3f7w_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW----DDRTLAMEWVDERP 96 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE----ETTEEEEECCCCCC
T ss_pred EecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec----cCceEEEEeecccC
Confidence 46899999999999999999999998754432 2356889999999885442 34555554 23578999998764
No 422
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.52 E-value=9.5e-05 Score=65.61 Aligned_cols=57 Identities=19% Similarity=0.251 Sum_probs=45.2
Q ss_pred cEEeecccccC-CcCCCCcccccceeecccccCcccCCcchhhhccccceeccCCccc
Q 005693 168 RYLYLQHNNFS-GKIPSSFSPQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLS 224 (682)
Q Consensus 168 ~~L~L~~N~l~-g~~p~~~~~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~ 224 (682)
+.++.+++.++ ..+|..+.++|++|+|++|+|+...+..|..+++|+.|+|++|.+.
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFPVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCCTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CEEEeCCCCCccccCCCCCCcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 36777777776 4677777788899999999998666677888888888888888765
No 423
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.43 E-value=0.00069 Score=72.86 Aligned_cols=73 Identities=12% Similarity=0.097 Sum_probs=45.3
Q ss_pred CCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCCCCCCC-----CCcccCccccccCC---CCCcchHHHHHHHHHHHH
Q 005693 508 PKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPSR-----SAGYRAPEVIETRK---HSHKSDVYSFGVLLLEML 579 (682)
Q Consensus 508 ~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~-----~~~y~aPE~~~~~~---~~~~sDvwS~Gvvl~ell 579 (682)
+.++|+|+++.|||+++++ ++|+||+.+..-........ ...|.+|+...... .....++.+....+|+.+
T Consensus 232 ~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 310 (420)
T 2pyw_A 232 QALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNLF 310 (420)
T ss_dssp CEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHHH
T ss_pred CeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHHH
Confidence 4599999999999999876 99999998764321110000 11255555543211 112345557788888877
Q ss_pred hC
Q 005693 580 TG 581 (682)
Q Consensus 580 tg 581 (682)
++
T Consensus 311 ~~ 312 (420)
T 2pyw_A 311 NK 312 (420)
T ss_dssp HH
T ss_pred HH
Confidence 75
No 424
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.41 E-value=0.00083 Score=68.67 Aligned_cols=71 Identities=6% Similarity=-0.011 Sum_probs=45.4
Q ss_pred ccccccCeEEEEEEEEcCCceEEEEEeeccccChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeec-cCCch
Q 005693 391 EVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYF-ASGSL 468 (682)
Q Consensus 391 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~-~~g~L 468 (682)
+.|+.|....+|+. ..+++|+.........+.++|..++..+..+.-..+++++ +.+.-++|+||+ ++-++
T Consensus 24 ~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g~~l 95 (301)
T 3dxq_A 24 LERLGGLTNLVFRA-----GDLCLRIPGKGTEEYINRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGAQTM 95 (301)
T ss_dssp EEEESCSSEEEEEE-----TTEEEEEECC----CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTCEEC
T ss_pred eEcCCcccccccee-----eeEEEECCCCCccceeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCCccC
Confidence 56888999999998 5688888754322222346788888777544333556554 444567899999 55444
No 425
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.28 E-value=0.0014 Score=67.67 Aligned_cols=75 Identities=12% Similarity=0.064 Sum_probs=50.2
Q ss_pred cccccCeEEEEEEEEcCCceEEEEEeeccccChhhHHHHHHHHHHhcCCC-ceeceEEE-----EEecCceEEEEeeccC
Q 005693 392 VLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHP-NVVPLRAY-----YYSKDEKLLVYDYFAS 465 (682)
Q Consensus 392 ~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~-niv~l~~~-----~~~~~~~~lV~e~~~~ 465 (682)
.++ |....||+....+|+.+++|...........+..|..++..+..+. .+++++.. ....+..++||||++|
T Consensus 33 ~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i~G 111 (328)
T 1zyl_A 33 PLN-SYENRVYQFQDEDRRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGG 111 (328)
T ss_dssp EEC-CSSSEEEEECCTTCCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCC
T ss_pred eec-CcccceEEEEcCCCCEEEEEEcCCCCCCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEecCC
Confidence 355 7778899887766778999998644345567778888888775432 24444433 1224456789999987
Q ss_pred Cc
Q 005693 466 GS 467 (682)
Q Consensus 466 g~ 467 (682)
..
T Consensus 112 ~~ 113 (328)
T 1zyl_A 112 RQ 113 (328)
T ss_dssp EE
T ss_pred CC
Confidence 54
No 426
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.18 E-value=7.8e-05 Score=69.49 Aligned_cols=81 Identities=7% Similarity=0.063 Sum_probs=48.3
Q ss_pred CCcEEEccCCCCCCCCCCcCCCCCCCcEEeecccc-cCCcCCCCc------ccccceeeccccc-CcccCCcchhhhccc
Q 005693 142 ALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNN-FSGKIPSSF------SPQLVVLDLSFNS-FTGNIPQSIQNLTQL 213 (682)
Q Consensus 142 ~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~-l~g~~p~~~------~~~L~~L~ls~N~-l~g~~p~~~~~l~~L 213 (682)
+|+.|||+++.++..--..+.++++|+.|+|+++. ++..--..+ .++|++|+|+++. +|..-=..+.++++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 57777777777764333456778888888888874 553111111 1357777777763 664333345566666
Q ss_pred cceeccCCc
Q 005693 214 TGLSLQSNN 222 (682)
Q Consensus 214 ~~L~l~~N~ 222 (682)
+.|+|+++.
T Consensus 142 ~~L~L~~c~ 150 (176)
T 3e4g_A 142 KYLFLSDLP 150 (176)
T ss_dssp CEEEEESCT
T ss_pred CEEECCCCC
Confidence 666666553
No 427
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=97.11 E-value=0.0022 Score=69.61 Aligned_cols=74 Identities=7% Similarity=0.050 Sum_probs=48.4
Q ss_pred ccccccCeEEEEEEEEcC-CceEEEEEeeccccChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEeeccCCch
Q 005693 391 EVLGKGSYGTAYKAVLEE-STTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYFASGSL 468 (682)
Q Consensus 391 ~~lG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~~~~g~L 468 (682)
+.|+.|-...+|+....+ +..+++|+........-+..+|..++..+..+.-..++++.+. + .+||||++|-.|
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~l 188 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEIINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYAL 188 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEEC
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCccC
Confidence 457778889999998765 4678888764322112234688999999865554567777762 2 359999987544
No 428
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.08 E-value=0.0032 Score=64.78 Aligned_cols=145 Identities=10% Similarity=0.097 Sum_probs=79.3
Q ss_pred ccccccCeEEEEEEEEcCCceEEEEEeeccccChhhHHHHHHHHHHhcCCC-ceeceEEE------EEecCceEEEEeec
Q 005693 391 EVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHP-NVVPLRAY------YYSKDEKLLVYDYF 463 (682)
Q Consensus 391 ~~lG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~-niv~l~~~------~~~~~~~~lV~e~~ 463 (682)
+.|+.|....+|+....++ .+++|..... ....++..|..++..+..+. .+.+++.. ....+..+++++|+
T Consensus 28 ~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~-~~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~~l 105 (322)
T 2ppq_A 28 KGIAEGVENSNFLLHTTKD-PLILTLYEKR-VEKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALISFL 105 (322)
T ss_dssp EEECC---EEEEEEEESSC-CEEEEEECC----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEECC
T ss_pred eccCCCcccceEEEEeCCc-cEEEEEeCCC-CCHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEEeC
Confidence 3567788889999987655 6888887652 23456677888887775432 13333321 12235678999999
Q ss_pred cCCchhH--------------hhccC-CC--CCC-CC---CCHHHHHH------------HHHHHHHHHHHHHhc----C
Q 005693 464 ASGSLST--------------LLHGN-RG--AGR-TP---LDWETRVK------------ILLGTARGVAHIHSM----G 506 (682)
Q Consensus 464 ~~g~L~~--------------~l~~~-~~--~~~-~~---l~~~~~~~------------i~~~ia~gl~~LH~~----~ 506 (682)
+|..+.. .++.. .. ... .. ..|..... +...+...+++++.. .
T Consensus 106 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~~~ 185 (322)
T 2ppq_A 106 EGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPKDL 185 (322)
T ss_dssp CCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCCSS
T ss_pred CCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCcccC
Confidence 8754321 11110 00 000 00 11222110 001133445555532 1
Q ss_pred CCCcEecCCCCCCeEecCCCCeEEeecCCCC
Q 005693 507 GPKFTHGNIKASNVLINQDLDGCISDFGLTP 537 (682)
Q Consensus 507 ~~~ivHrDLk~~NILl~~~~~~kl~DfGla~ 537 (682)
.+.++|+|+.+.||+++++..+.|+||+.+.
T Consensus 186 ~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 186 PAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp CEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred CcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 2348999999999999987666899998653
No 429
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.08 E-value=0.0015 Score=67.78 Aligned_cols=143 Identities=15% Similarity=0.108 Sum_probs=73.3
Q ss_pred cccccCeEE-EEEEEEcCCceEEEEEeeccccChhhHHHHHHHHHHhcCCC-ceeceEEEEEecCceEEEEeeccCCchh
Q 005693 392 VLGKGSYGT-AYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHP-NVVPLRAYYYSKDEKLLVYDYFASGSLS 469 (682)
Q Consensus 392 ~lG~G~fg~-Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~-niv~l~~~~~~~~~~~lV~e~~~~g~L~ 469 (682)
.|+.|.... +|+....++..+++|...... ..++..|+.++..+..+. .+.+++.+. .+.-++|||++.+..+.
T Consensus 25 ~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~--~~~~~~e~~~l~~L~~~g~~vP~v~~~d--~~~g~ll~e~l~~~~l~ 100 (333)
T 3csv_A 25 PLAGDASSRRYQRLRSPTGAKAVLMDWSPEE--GGDTQPFVDLAQYLRNLDISAPEIYAEE--HARGLLLIEDLGDALFT 100 (333)
T ss_dssp C--------CCEEEECTTCCEEEEEECCTTT--TCCSHHHHHHHHHHHHTTCBCCCEEEEE--TTTTEEEECCCCSCBHH
T ss_pred ECCCCCCCceEEEEEcCCCCeEEEEECCCCC--CccccHHHHHHHHHHhCCCCCCceeeec--CCCCEEEEeeCCCcchH
Confidence 455554444 667654436667776543321 145566777777775442 355666663 23337899999776665
Q ss_pred HhhccCC---------------------CCCCCCCCHHHHH-------H-------------HHHHHHHHHHHHHh---c
Q 005693 470 TLLHGNR---------------------GAGRTPLDWETRV-------K-------------ILLGTARGVAHIHS---M 505 (682)
Q Consensus 470 ~~l~~~~---------------------~~~~~~l~~~~~~-------~-------------i~~~ia~gl~~LH~---~ 505 (682)
+++.... ......++..... . ....+...++.+.. .
T Consensus 101 ~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~~~ 180 (333)
T 3csv_A 101 EVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQLE 180 (333)
T ss_dssp HHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHHCC
T ss_pred HHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhccc
Confidence 4443211 0001112211100 0 00011122222311 1
Q ss_pred CCCCcEecCCCCCCeEecCC----CCeEEeecCCCCC
Q 005693 506 GGPKFTHGNIKASNVLINQD----LDGCISDFGLTPL 538 (682)
Q Consensus 506 ~~~~ivHrDLk~~NILl~~~----~~~kl~DfGla~~ 538 (682)
..+.++|+|+.+.||+++.+ +.+.|+||+.+..
T Consensus 181 ~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 181 GDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp SCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred CCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 23459999999999999875 6789999998754
No 430
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.06 E-value=0.001 Score=71.75 Aligned_cols=73 Identities=12% Similarity=0.104 Sum_probs=50.2
Q ss_pred ccccccCeEEEEEEEEcC--------CceEEEEEeeccccChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEee
Q 005693 391 EVLGKGSYGTAYKAVLEE--------STTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDY 462 (682)
Q Consensus 391 ~~lG~G~fg~Vy~~~~~~--------~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~ 462 (682)
+.|+.|....||+....+ +..+++|+.... .....+.+|..++..+..+.-.+++++.+.+ .+|+||
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~-~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~e~ 153 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP-ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEEY 153 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC-CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEECC
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC-CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEEEE
Confidence 457778889999998753 467888887432 1125566888888888655545677776532 389999
Q ss_pred ccCCch
Q 005693 463 FASGSL 468 (682)
Q Consensus 463 ~~~g~L 468 (682)
++|-++
T Consensus 154 l~G~~l 159 (429)
T 1nw1_A 154 IPSRPL 159 (429)
T ss_dssp CCEEEC
T ss_pred eCCccc
Confidence 986443
No 431
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=97.05 E-value=0.0018 Score=68.34 Aligned_cols=143 Identities=15% Similarity=0.206 Sum_probs=83.3
Q ss_pred ccccccCeEEEEEEEEcC--------CceEEEEEeeccccChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEee
Q 005693 391 EVLGKGSYGTAYKAVLEE--------STTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDY 462 (682)
Q Consensus 391 ~~lG~G~fg~Vy~~~~~~--------~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~ 462 (682)
+.+..|-...+|+....+ ++.+++|+.-..........+|.++++.+..+.-..++++++.+ .+||||
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e~ 131 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQY 131 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEEC
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCccchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEEE
Confidence 346667778899988642 46788888643233455677899999888666555677776543 399999
Q ss_pred ccCCchhHh-----------------hccCCC-CCCCCC-CHHHHHHHHHHHHH-------------------HHHHH--
Q 005693 463 FASGSLSTL-----------------LHGNRG-AGRTPL-DWETRVKILLGTAR-------------------GVAHI-- 502 (682)
Q Consensus 463 ~~~g~L~~~-----------------l~~~~~-~~~~~l-~~~~~~~i~~~ia~-------------------gl~~L-- 502 (682)
++|..|..- +|...- ....+. -+.+..++..++.. .+..|
T Consensus 132 i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~ 211 (379)
T 3feg_A 132 IPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLRK 211 (379)
T ss_dssp CSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHHH
T ss_pred ecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHHH
Confidence 988554311 111110 011111 23444444443321 23333
Q ss_pred --HhcC-CCCcEecCCCCCCeEecCC----CCeEEeecCCCC
Q 005693 503 --HSMG-GPKFTHGNIKASNVLINQD----LDGCISDFGLTP 537 (682)
Q Consensus 503 --H~~~-~~~ivHrDLk~~NILl~~~----~~~kl~DfGla~ 537 (682)
.... ...++|+|+.+.||+++++ +.+.++||..+.
T Consensus 212 ~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 212 LLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 2222 2348999999999999876 789999998764
No 432
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.83 E-value=0.0021 Score=67.69 Aligned_cols=74 Identities=12% Similarity=0.112 Sum_probs=44.9
Q ss_pred ccccccCeEEEEEEEEcC---------CceEEEEEeeccccChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEe
Q 005693 391 EVLGKGSYGTAYKAVLEE---------STTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYD 461 (682)
Q Consensus 391 ~~lG~G~fg~Vy~~~~~~---------~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e 461 (682)
+.++.|....+|+....+ +..+++|+.........+...|.+++..+..+.-+.++++.. .-++|||
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~~~~~~~E~~~l~~L~~~g~~P~~~~~~----~~~~v~e 114 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDELYNTISEFEVYKTMSKYKIAPQLLNTF----NGGRIEE 114 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGGTSCHHHHHHHHHHHHHTTSSCCEEEEE----TTEEEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccceecHHHHHHHHHHHHhcCCCCceEEec----CCcEEEE
Confidence 457778888999998754 257788776442211123467888888885554355676553 2378999
Q ss_pred eccCCch
Q 005693 462 YFASGSL 468 (682)
Q Consensus 462 ~~~~g~L 468 (682)
|++|..+
T Consensus 115 ~i~G~~l 121 (369)
T 3c5i_A 115 WLYGDPL 121 (369)
T ss_dssp CCCSEEC
T ss_pred EecCCcC
Confidence 9987543
No 433
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.75 E-value=0.00014 Score=68.96 Aligned_cols=85 Identities=13% Similarity=0.140 Sum_probs=53.1
Q ss_pred cCCCCCCcEEEccCC-CCCC----CCCCcCCCCCCCcEEeecccccCCcCCCCcc------cccceeecccccCccc---
Q 005693 137 LGKLDALEVLSLRSN-VLTG----GLPSEITSLPSLRYLYLQHNNFSGKIPSSFS------PQLVVLDLSFNSFTGN--- 202 (682)
Q Consensus 137 ~~~l~~L~~L~L~~N-~l~g----~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~------~~L~~L~ls~N~l~g~--- 202 (682)
+.+-+.|++|+|++| +|.. .+-+.+..=+.|+.|+|++|+|...--..+. +.|+.|+|++|+|+..
T Consensus 37 l~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ 116 (197)
T 1pgv_A 37 REDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLA 116 (197)
T ss_dssp HTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHH
T ss_pred HhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHH
Confidence 455577888888875 6652 1223445556788888888888743333333 5688888888888743
Q ss_pred -CCcchhhhccccceeccCC
Q 005693 203 -IPQSIQNLTQLTGLSLQSN 221 (682)
Q Consensus 203 -~p~~~~~l~~L~~L~l~~N 221 (682)
+-..+..-+.|+.|+|++|
T Consensus 117 ala~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 117 RLLRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHHHHTTTTCCCSEEECCCC
T ss_pred HHHHHHhhCCceeEEECCCC
Confidence 2233444456777777654
No 434
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=96.41 E-value=0.00086 Score=62.39 Aligned_cols=80 Identities=10% Similarity=0.035 Sum_probs=56.3
Q ss_pred CCCcEEeecccccCCcCCCCcc--cccceeeccccc-CcccCCcchhhh----ccccceeccCCc-ccC--CCCCCCCCC
Q 005693 165 PSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNS-FTGNIPQSIQNL----TQLTGLSLQSNN-LSG--SIPNFDIPK 234 (682)
Q Consensus 165 ~~L~~L~L~~N~l~g~~p~~~~--~~L~~L~ls~N~-l~g~~p~~~~~l----~~L~~L~l~~N~-l~g--~~p~~~l~~ 234 (682)
-+|+.|||+++.++..--..+. ++|+.|+|+++. |+..-=..++.+ ++|+.|+|+++. ++. ...-..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 4799999999998743222222 789999999985 775433445543 479999999975 662 111126899
Q ss_pred CCeEEecccC
Q 005693 235 LRHLNLSYNG 244 (682)
Q Consensus 235 L~~l~ls~N~ 244 (682)
|+.|+|+++.
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 9999999875
No 435
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.35 E-value=0.01 Score=61.73 Aligned_cols=69 Identities=16% Similarity=0.140 Sum_probs=43.4
Q ss_pred cccCeEEEEEEEEcCCceEEEEEeeccccChhhHHHHHHHHHHhcCC--CceeceEEE------EEecCceEEEEeeccC
Q 005693 394 GKGSYGTAYKAVLEESTTVVVKRLKEVVVGKRDFEQQMEIVGRVGQH--PNVVPLRAY------YYSKDEKLLVYDYFAS 465 (682)
Q Consensus 394 G~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h--~niv~l~~~------~~~~~~~~lV~e~~~~ 465 (682)
|.|....||+....++ .+++|+...... ..|..++..+.++ +.+++.+.. ....+..++||+|++|
T Consensus 32 G~g~~N~vy~v~~~~g-~~vLK~~~~~~~-----~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i~G 105 (339)
T 3i1a_A 32 GADTNAFAYQADSESK-SYFIKLKYGYHD-----EINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIHA 105 (339)
T ss_dssp TSCSSCEEEEEECSSC-EEEEEEEECSSC-----CHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECCCC
T ss_pred cCccccceEEEEeCCC-CEEEEEecCccc-----hHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEeccCC
Confidence 4444678999987666 889998765431 3455666555332 224454432 2334667899999998
Q ss_pred Cch
Q 005693 466 GSL 468 (682)
Q Consensus 466 g~L 468 (682)
..+
T Consensus 106 ~~~ 108 (339)
T 3i1a_A 106 PNG 108 (339)
T ss_dssp CBT
T ss_pred CcC
Confidence 755
No 436
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.29 E-value=0.0058 Score=53.90 Aligned_cols=56 Identities=27% Similarity=0.291 Sum_probs=41.2
Q ss_pred EEEeCCCccc-ccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecccccC
Q 005693 120 GLRLPGIGLV-GPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFS 178 (682)
Q Consensus 120 ~l~l~~~~l~-g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~ 178 (682)
.++.++++|+ ..+|.+ + -.+|+.|+|++|+|+..-+..|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~-l--p~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTA-F--PVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSC-C--CTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCC-C--CcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 5777788886 456652 2 246889999999998555566788888888888888775
No 437
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.28 E-value=0.041 Score=52.50 Aligned_cols=102 Identities=12% Similarity=0.066 Sum_probs=66.5
Q ss_pred chhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCCCCCCCCCCC
Q 005693 467 SLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTPLMNVPATPS 546 (682)
Q Consensus 467 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 546 (682)
+|.+.|... ..++++++++.++.|.+.+|.-+-.... + ..+=+.|..|++..+|.|.+.+ +.+. .
T Consensus 34 SL~eIL~~~----~~PlsEEqaWALc~Qc~~~L~~~~~~~~-~-~~~i~~~~~i~l~~dG~V~f~~-~~s~--------~ 98 (229)
T 2yle_A 34 SLEEILRLY----NQPINEEQAWAVCYQCCGSLRAAARRRQ-P-RHRVRSAAQIRVWRDGAVTLAP-AADD--------A 98 (229)
T ss_dssp EHHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHHHTTC-C-CCCCCSGGGEEEETTSCEEECC-C------------
T ss_pred cHHHHHHHc----CCCcCHHHHHHHHHHHHHHHHhhhhccc-C-CceecCCcceEEecCCceeccc-cccc--------c
Confidence 788888753 3569999999999999998877632111 1 1233446899999999998764 1111 1
Q ss_pred CCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCC
Q 005693 547 RSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAP 584 (682)
Q Consensus 547 ~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~P 584 (682)
....+.|||... ...+.+.=|||+|+++|..+--..|
T Consensus 99 ~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 99 GEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp --------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred cccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 223467888764 3456788999999999998875444
No 438
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=96.12 E-value=0.0076 Score=63.99 Aligned_cols=110 Identities=15% Similarity=0.226 Sum_probs=77.9
Q ss_pred cCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecccccCCcCCCCcc--cccceeecccccCcccCCcchh
Q 005693 131 PIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQ 208 (682)
Q Consensus 131 ~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~--~~L~~L~ls~N~l~g~~p~~~~ 208 (682)
.+...+|.++..|+.+.+.++..+ .-...|.++++|+.+.+. +.++..-...|. .+|+.++|..| ++..-..+|.
T Consensus 255 ~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~ 331 (394)
T 4gt6_A 255 RIETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFA 331 (394)
T ss_dssp EECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTT
T ss_pred EcccceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhh
Confidence 344457888899999988766543 445678888999999886 445533334454 68899988765 6655567888
Q ss_pred hhccccceeccCCcccCCCCCC---CCCCCCeEEecccCC
Q 005693 209 NLTQLTGLSLQSNNLSGSIPNF---DIPKLRHLNLSYNGL 245 (682)
Q Consensus 209 ~l~~L~~L~l~~N~l~g~~p~~---~l~~L~~l~ls~N~l 245 (682)
+|++|+.+.|.+| ++ .+... ++++|+.+++.+|..
T Consensus 332 ~C~~L~~i~ip~s-v~-~I~~~aF~~C~~L~~i~~~~~~~ 369 (394)
T 4gt6_A 332 GCEQLERIAIPSS-VT-KIPESAFSNCTALNNIEYSGSRS 369 (394)
T ss_dssp TCTTCCEEEECTT-CC-BCCGGGGTTCTTCCEEEESSCHH
T ss_pred CCCCCCEEEECcc-cC-EEhHhHhhCCCCCCEEEECCcee
Confidence 9999999988655 54 34432 788899999887754
No 439
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=96.08 E-value=0.0073 Score=64.66 Aligned_cols=74 Identities=7% Similarity=0.075 Sum_probs=49.1
Q ss_pred ccccccCeEEEEEEEEcC--------CceEEEEEeeccccChhhHHHHHHHHHHhcCCCceeceEEEEEecCceEEEEee
Q 005693 391 EVLGKGSYGTAYKAVLEE--------STTVVVKRLKEVVVGKRDFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDY 462 (682)
Q Consensus 391 ~~lG~G~fg~Vy~~~~~~--------~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lV~e~ 462 (682)
+.+..|-...+|+....+ +..+++++........-+.++|..++..+..+.-..++++.+ .-++||||
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~idR~~E~~~l~~L~~~gi~P~l~~~~----~~~~I~ef 151 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKFYDSKVELDVFRYLSNINIAPNIIADF----PEGRIEEF 151 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CCCCHHHHHHHHHHHHHTTSSCCEEEEE----TTEEEEEC
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchhcCHHHHHHHHHHHHhcCCCCCEEEEc----CCCEEEEE
Confidence 346667778899988753 567888876433222234578888888886555556677543 23789999
Q ss_pred ccCCch
Q 005693 463 FASGSL 468 (682)
Q Consensus 463 ~~~g~L 468 (682)
++|..|
T Consensus 152 I~G~~l 157 (424)
T 3mes_A 152 IDGEPL 157 (424)
T ss_dssp CCSEEC
T ss_pred eCCccC
Confidence 998654
No 440
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.05 E-value=0.00056 Score=64.91 Aligned_cols=109 Identities=14% Similarity=0.209 Sum_probs=70.5
Q ss_pred CCeEEEEEeCCC-cccc----cCCccccCCCCCCcEEEccCCCCCCC----CCCcCCCCCCCcEEeecccccCCcCCCCc
Q 005693 115 RTRVFGLRLPGI-GLVG----PIPNNTLGKLDALEVLSLRSNVLTGG----LPSEITSLPSLRYLYLQHNNFSGKIPSSF 185 (682)
Q Consensus 115 ~~~v~~l~l~~~-~l~g----~lp~~~~~~l~~L~~L~L~~N~l~g~----~p~~~~~l~~L~~L~L~~N~l~g~~p~~~ 185 (682)
...++.|+|+++ ++.. .+-. .+..=+.|+.|+|++|+|... +-+.+..=+.|+.|+|++|+|+..--..+
T Consensus 40 n~~L~~L~L~~nn~igd~ga~~la~-aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~al 118 (197)
T 1pgv_A 40 DTDLKEVNINNMKRVSKERIRSLIE-AACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARL 118 (197)
T ss_dssp CSSCCEEECTTCCSSCHHHHHHHHH-HHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHH
T ss_pred CCCccEEECCCCCCCCHHHHHHHHH-HHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHH
Confidence 356788888875 4431 1222 466678899999999999732 22333345789999999999984322222
Q ss_pred c------cccceeecccc---cCccc----CCcchhhhccccceeccCCccc
Q 005693 186 S------PQLVVLDLSFN---SFTGN----IPQSIQNLTQLTGLSLQSNNLS 224 (682)
Q Consensus 186 ~------~~L~~L~ls~N---~l~g~----~p~~~~~l~~L~~L~l~~N~l~ 224 (682)
. ..|++|+|++| .+... +-..+..-+.|+.|+|+.|.+.
T Consensus 119 a~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 119 LRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASME 170 (197)
T ss_dssp HHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCHH
T ss_pred HHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCcc
Confidence 1 56999999876 33422 3345555677888888776643
No 441
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=95.87 E-value=0.015 Score=61.72 Aligned_cols=134 Identities=16% Similarity=0.133 Sum_probs=62.5
Q ss_pred eEEEEEeCCCcccccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecccccCCcCCCCcc--cccceeec
Q 005693 117 RVFGLRLPGIGLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDL 194 (682)
Q Consensus 117 ~v~~l~l~~~~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~--~~L~~L~l 194 (682)
.+..+.++..- + .+....+.+...|+.+.+..|..+ .-...|.++.+|+.+.+..+.+.. ..|. .+|+.+.+
T Consensus 231 ~l~~i~ip~~~-~-~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~~---~~F~~~~~L~~i~l 304 (394)
T 4fs7_A 231 GVKNIIIPDSF-T-ELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVPE---KTFYGCSSLTEVKL 304 (394)
T ss_dssp CCCEEEECTTC-C-EECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEECT---TTTTTCTTCCEEEE
T ss_pred CCceEEECCCc-e-ecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeecc---cccccccccccccc
Confidence 34555555432 2 344456777777777777666443 333445555555555554443211 1111 44555555
Q ss_pred ccccCcccCCcchhhhccccceeccCCcccCCCCC--C-CCCCCCeEEecccCCCCCCCccccCCCCCC
Q 005693 195 SFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPN--F-DIPKLRHLNLSYNGLKGSIPSSLQKFPNSS 260 (682)
Q Consensus 195 s~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~--~-~l~~L~~l~ls~N~l~g~~p~~~~~l~~l~ 260 (682)
.+| ++..-..+|.++++|+.++|.++ ++ .+.. + ++.+|+.+++..| ++..-...|.++.+|+
T Consensus 305 ~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~ 369 (394)
T 4fs7_A 305 LDS-VKFIGEEAFESCTSLVSIDLPYL-VE-EIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLK 369 (394)
T ss_dssp CTT-CCEECTTTTTTCTTCCEECCCTT-CC-EECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCC
T ss_pred ccc-cceechhhhcCCCCCCEEEeCCc-cc-EEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCC
Confidence 433 44333445555555555555432 32 2222 1 4455555555443 3322223444444443
No 442
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=95.80 E-value=0.021 Score=60.07 Aligned_cols=123 Identities=14% Similarity=0.095 Sum_probs=77.2
Q ss_pred ccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecccccCCcCCCCcc--cccceeecccccCcccCCcchhhhccc
Q 005693 136 TLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQL 213 (682)
Q Consensus 136 ~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~--~~L~~L~ls~N~l~g~~p~~~~~l~~L 213 (682)
.+.....|+.+.+..+ +...-...+.++.+|+.+.+..+ ++..-...|. .+|+.+.+..+ ++..-...|.++++|
T Consensus 212 ~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L 288 (379)
T 4h09_A 212 GFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNL 288 (379)
T ss_dssp TTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTC
T ss_pred ccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceecccccccccccc
Confidence 5667777888887655 33244456778888888888765 4423233333 56777777544 554555677888888
Q ss_pred cceeccCCcccCCCCCC--CCCCCCeEEecccCCCCCCCccccCCCCCCCC
Q 005693 214 TGLSLQSNNLSGSIPNF--DIPKLRHLNLSYNGLKGSIPSSLQKFPNSSFV 262 (682)
Q Consensus 214 ~~L~l~~N~l~g~~p~~--~l~~L~~l~ls~N~l~g~~p~~~~~l~~l~~~ 262 (682)
+.+.+.+|.++..-... ++.+|+.++|..| ++..-...|.++.+|+-+
T Consensus 289 ~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i 338 (379)
T 4h09_A 289 TKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTI 338 (379)
T ss_dssp CEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCC
T ss_pred ccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEE
Confidence 88888877776322222 6778888888654 542223456666666544
No 443
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.65 E-value=0.024 Score=60.11 Aligned_cols=143 Identities=16% Similarity=0.216 Sum_probs=81.1
Q ss_pred ccccccCeEEEEEEEEcC--------CceEEEEEeeccc------------cCh-------hhHHHHHHHHHHhcCCCce
Q 005693 391 EVLGKGSYGTAYKAVLEE--------STTVVVKRLKEVV------------VGK-------RDFEQQMEIVGRVGQHPNV 443 (682)
Q Consensus 391 ~~lG~G~fg~Vy~~~~~~--------~~~vavK~l~~~~------------~~~-------~~~~~e~~~l~~l~~h~ni 443 (682)
+.|..|-...+|+....+ ...+++++.-... .++ +....|..++..+..+--.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 346567788999988653 2567777653221 011 1122478888888667667
Q ss_pred eceEEEEEecCceEEEEeeccCCchhH--h---------------hccCC-CCCCCCC-CHHHHHHHHHHHH--------
Q 005693 444 VPLRAYYYSKDEKLLVYDYFASGSLST--L---------------LHGNR-GAGRTPL-DWETRVKILLGTA-------- 496 (682)
Q Consensus 444 v~l~~~~~~~~~~~lV~e~~~~g~L~~--~---------------l~~~~-~~~~~~l-~~~~~~~i~~~ia-------- 496 (682)
.++++++.+ .+|+||+++-+|.. + +|... .....+. -+....++..++.
T Consensus 138 Pkl~~~~~~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQ----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETT----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCC----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 788877642 28999998744421 1 11111 0011111 1233333333221
Q ss_pred --------------HHHH----HHHhcC-CCCcEecCCCCCCeEecCC------CCeEEeecCCCC
Q 005693 497 --------------RGVA----HIHSMG-GPKFTHGNIKASNVLINQD------LDGCISDFGLTP 537 (682)
Q Consensus 497 --------------~gl~----~LH~~~-~~~ivHrDLk~~NILl~~~------~~~kl~DfGla~ 537 (682)
.-+. +|...+ ...++|+|+.+.||+++++ +.+.++||..|.
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 1122 233322 2248999999999999887 789999997653
No 444
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=95.62 E-value=0.029 Score=59.44 Aligned_cols=37 Identities=22% Similarity=0.233 Sum_probs=19.6
Q ss_pred cchhhhccccceeccCCcccCCCCCC---CCCCCCeEEeccc
Q 005693 205 QSIQNLTQLTGLSLQSNNLSGSIPNF---DIPKLRHLNLSYN 243 (682)
Q Consensus 205 ~~~~~l~~L~~L~l~~N~l~g~~p~~---~l~~L~~l~ls~N 243 (682)
.+|.++++|+.+.+.++..+ ++.. .+.+|+.+++..|
T Consensus 156 ~aF~~c~~L~~i~l~~~~~~--I~~~~F~~c~~L~~i~l~~~ 195 (394)
T 4fs7_A 156 EAFATCESLEYVSLPDSMET--LHNGLFSGCGKLKSIKLPRN 195 (394)
T ss_dssp TTTTTCTTCCEEECCTTCCE--ECTTTTTTCTTCCBCCCCTT
T ss_pred hhhcccCCCcEEecCCccce--eccccccCCCCceEEEcCCC
Confidence 45666666666666544322 2221 4556666666544
No 445
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=95.58 E-value=0.026 Score=59.74 Aligned_cols=100 Identities=13% Similarity=0.183 Sum_probs=59.7
Q ss_pred CCcCCCCCCCcEEeecccccCCcCCCCcc--cccceeecccccCcccCCcchhhhccccceeccCCcccCCCCC--C-CC
Q 005693 158 PSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLTQLTGLSLQSNNLSGSIPN--F-DI 232 (682)
Q Consensus 158 p~~~~~l~~L~~L~L~~N~l~g~~p~~~~--~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~--~-~l 232 (682)
...|.++++|+.+.+.++..+ .-...|. .+|+.+.+. +.++..-..+|.++.+|+.+.|.+| ++ .+.. + ++
T Consensus 258 ~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~C 333 (394)
T 4gt6_A 258 THAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-IT-QILDDAFAGC 333 (394)
T ss_dssp TTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTC
T ss_pred cceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-cc-EehHhHhhCC
Confidence 456777777777777655433 2223333 567777775 4555455567777778888777654 33 2332 2 66
Q ss_pred CCCCeEEecccCCCCCCCccccCCCCCCCC
Q 005693 233 PKLRHLNLSYNGLKGSIPSSLQKFPNSSFV 262 (682)
Q Consensus 233 ~~L~~l~ls~N~l~g~~p~~~~~l~~l~~~ 262 (682)
.+|+.+.|..+ ++..-...|.++++|+-+
T Consensus 334 ~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i 362 (394)
T 4gt6_A 334 EQLERIAIPSS-VTKIPESAFSNCTALNNI 362 (394)
T ss_dssp TTCCEEEECTT-CCBCCGGGGTTCTTCCEE
T ss_pred CCCCEEEECcc-cCEEhHhHhhCCCCCCEE
Confidence 77777777544 552223456666666543
No 446
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=94.94 E-value=0.098 Score=54.80 Aligned_cols=104 Identities=13% Similarity=0.175 Sum_probs=53.7
Q ss_pred ccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeecccccCCcCCCCcc--cccceeecccccCcccCCcchhhhc
Q 005693 134 NNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHNNFSGKIPSSFS--PQLVVLDLSFNSFTGNIPQSIQNLT 211 (682)
Q Consensus 134 ~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~--~~L~~L~ls~N~l~g~~p~~~~~l~ 211 (682)
...+.+...|+.+.+..+ ++..-...|.++.+|+.+.+..+ +...-...|. .+|+.+++.+|.++..-..+|.++.
T Consensus 233 ~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~ 310 (379)
T 4h09_A 233 DGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCV 310 (379)
T ss_dssp TTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCT
T ss_pred cccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCC
Confidence 334556666666666544 44233345566666666666443 3312122232 4566666666666644455666666
Q ss_pred cccceeccCCcccCCCCCC---CCCCCCeEEec
Q 005693 212 QLTGLSLQSNNLSGSIPNF---DIPKLRHLNLS 241 (682)
Q Consensus 212 ~L~~L~l~~N~l~g~~p~~---~l~~L~~l~ls 241 (682)
+|+.+.|.+| ++ .+... ++.+|+.+.+.
T Consensus 311 ~L~~i~lp~~-l~-~I~~~aF~~C~~L~~i~ip 341 (379)
T 4h09_A 311 KLSSVTLPTA-LK-TIQVYAFKNCKALSTISYP 341 (379)
T ss_dssp TCCEEECCTT-CC-EECTTTTTTCTTCCCCCCC
T ss_pred CCCEEEcCcc-cc-EEHHHHhhCCCCCCEEEEC
Confidence 6666666543 33 22221 45555555543
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=91.63 E-value=0.46 Score=50.26 Aligned_cols=28 Identities=21% Similarity=0.478 Sum_probs=23.8
Q ss_pred cEecCCCCCCeEe------cCCCCeEEeecCCCC
Q 005693 510 FTHGNIKASNVLI------NQDLDGCISDFGLTP 537 (682)
Q Consensus 510 ivHrDLk~~NILl------~~~~~~kl~DfGla~ 537 (682)
++|+|+.+.||++ +++..++++||-+|.
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~ 279 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhcc
Confidence 5799999999999 456779999998764
No 448
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=89.31 E-value=0.068 Score=35.56 Aligned_cols=31 Identities=19% Similarity=0.163 Sum_probs=20.5
Q ss_pred ccccceeeeeeehhhHHHHHHHHhhhhhhcc
Q 005693 301 KLGLGAIIAIAVGGSAVLLLVALVILCYCLK 331 (682)
Q Consensus 301 ~~~~~~Ii~ivv~~~~~~l~~~~li~~~~~r 331 (682)
..+.++|.+++++.++.+++++.+++++++|
T Consensus 7 ~ls~GaIAGiVvG~v~gv~li~~l~~~~~rr 37 (38)
T 2k1k_A 7 GLTGGEIVAVIFGLLLGAALLLGILVFRSRR 37 (38)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCCceeeeehHHHHHHHHHHHHHHHHeec
Confidence 3456778888888877766666555555444
No 449
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=89.28 E-value=0.12 Score=35.54 Aligned_cols=31 Identities=29% Similarity=0.254 Sum_probs=17.4
Q ss_pred ceeeeeeehhhHHHHHHHHhhhhhhccccCC
Q 005693 305 GAIIAIAVGGSAVLLLVALVILCYCLKKKDN 335 (682)
Q Consensus 305 ~~Ii~ivv~~~~~~l~~~~li~~~~~rrk~~ 335 (682)
..|++.++++++++++++++++++.+||+++
T Consensus 11 ~~IA~gVVgGv~~~~ii~~~~~~~~RRr~~~ 41 (44)
T 2ks1_B 11 PSIATGMVGALLLLLVVALGIGLFMRRRHIV 41 (44)
T ss_dssp SSSTHHHHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred ceEEeehhHHHHHHHHHHHHHHHHhhhhHhh
Confidence 4456666666666555555555555555443
No 450
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=89.06 E-value=0.1 Score=35.74 Aligned_cols=31 Identities=29% Similarity=0.413 Sum_probs=18.3
Q ss_pred ceeeeeeehhhHHHHHHHHhhhhhhccccCC
Q 005693 305 GAIIAIAVGGSAVLLLVALVILCYCLKKKDN 335 (682)
Q Consensus 305 ~~Ii~ivv~~~~~~l~~~~li~~~~~rrk~~ 335 (682)
+.|++.++++++++++++++++++.+||+++
T Consensus 10 ~aIA~gVVgGv~~v~ii~~~~~~~~RRRr~~ 40 (44)
T 2l2t_A 10 PLIAAGVIGGLFILVIVGLTFAVYVRRKSIK 40 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCSS
T ss_pred ceEEEeehHHHHHHHHHHHHHHHHhhhhhhh
Confidence 4466666776666666555555555555443
No 451
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=81.83 E-value=3.5 Score=39.07 Aligned_cols=116 Identities=11% Similarity=0.095 Sum_probs=77.3
Q ss_pred CCCceeceEEEEEecCceEEEEeeccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCC
Q 005693 439 QHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVAHIHSMGGPKFTHGNIKAS 518 (682)
Q Consensus 439 ~h~niv~l~~~~~~~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~~LH~~~~~~ivHrDLk~~ 518 (682)
.||+.+.. .+-.+++...+.|+.-+.+-=...++ .++...+++++.+|+....+++. =+|--|.|+
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~ik--------~~~~~eKlr~l~ni~~l~~~~~~-----r~tf~L~P~ 108 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDNIK--------SFTKNEKLRYLLNIKNLEEVNRT-----RYTFVLAPD 108 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGGGG--------GSCHHHHHHHHHHGGGGGGGGGS-----SEECCCSGG
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHHHH--------hcCHHHHHHHHHHHHHHHHHhcC-----ceEEEEecc
Confidence 68988876 45556666666666443222222232 27889999999999887755554 478889999
Q ss_pred CeEecCCCCeEEeecCCCCCCCCCCCCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCC
Q 005693 519 NVLINQDLDGCISDFGLTPLMNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQ 586 (682)
Q Consensus 519 NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~ 586 (682)
|++++.++.+++.=.|+-..+ +|. ..++..=.-.+=+++..+++++..|.
T Consensus 109 NL~f~~~~~p~i~~RGik~~l-------------~P~-----~~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 109 ELFFTRDGLPIAKTRGLQNVV-------------DPL-----PVSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp GEEECTTSCEEESCCEETTTB-------------SCC-----CCCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred eEEEcCCCCEEEEEccCccCC-------------CCC-----CCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 999999999999876653322 222 11222223356778888999988885
No 452
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=81.09 E-value=0.32 Score=33.25 Aligned_cols=29 Identities=17% Similarity=0.370 Sum_probs=14.1
Q ss_pred eeeeeeehhhHHHHHHHHhhhhhhccccCC
Q 005693 306 AIIAIAVGGSAVLLLVALVILCYCLKKKDN 335 (682)
Q Consensus 306 ~Ii~ivv~~~~~~l~~~~li~~~~~rrk~~ 335 (682)
.|+++++| +++++++++.+++|.+||+.+
T Consensus 13 ~Ia~~vVG-vll~vi~~l~~~~~~RRR~~~ 41 (44)
T 2jwa_A 13 SIISAVVG-ILLVVVLGVVFGILIKRRQQK 41 (44)
T ss_dssp HHHHHHHH-HHHHHHHHHHHHHHHHHHCSC
T ss_pred chHHHHHH-HHHHHHHHHHHHhheehhhhh
Confidence 35555665 444444444444455554443
No 453
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=74.99 E-value=6.2 Score=37.53 Aligned_cols=115 Identities=15% Similarity=0.132 Sum_probs=75.9
Q ss_pred CCCceeceEEEEEecCceEEEEeeccCCchhHhhccCCCCCCCCCCHHHHHHHHHHHHHHHH-HHHhcCCCCcEecCCCC
Q 005693 439 QHPNVVPLRAYYYSKDEKLLVYDYFASGSLSTLLHGNRGAGRTPLDWETRVKILLGTARGVA-HIHSMGGPKFTHGNIKA 517 (682)
Q Consensus 439 ~h~niv~l~~~~~~~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gl~-~LH~~~~~~ivHrDLk~ 517 (682)
.||+. -..+-.+++...+.++.-+++.=...++. ++..++++++.+|+.... ++++ -+|--|.|
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~~--------~~~~eKlrll~nl~~L~~~~~~~-----r~tf~l~P 112 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIRK--------TTLLSRIRAAIHLVSKVKHHSAR-----RLIFIVCP 112 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHHT--------SCHHHHHHHHHHHHHHHSSCCSS-----SEECCCCG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHHh--------cCHHHHHHHHHHHHHHHHHhhhC-----ceeEEEeC
Confidence 68888 34444666777777776544433344432 788899999999887666 4544 57888999
Q ss_pred CCeEecCCCCeEEeecCCCCCCCCCCCCCCCCcccCccccccCCCCCcchHHHHHHHHHHHHhCCCCCC
Q 005693 518 SNVLINQDLDGCISDFGLTPLMNVPATPSRSAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQ 586 (682)
Q Consensus 518 ~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltg~~Pf~ 586 (682)
+|++++.++.+++.-.|+-.. ++|.-+ ++.-=.-.+=+++..++.++..|.
T Consensus 113 ~NL~f~~~~~p~i~hRGi~~~-------------lpP~e~-----~ee~fl~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 113 ENLMFNRALEPFFLHVGVKES-------------LPPDEW-----DDERLLREVKATVLALTEGEYRFD 163 (219)
T ss_dssp GGEEECTTCCEEESCCEETTT-------------BSSCSC-----CHHHHHHHHHHHHHHHTTCSSCHH
T ss_pred ceEEEeCCCcEEEEEcCCccc-------------CCCCCC-----CHHHHHHHHHHHHHHHHcCCCCHH
Confidence 999999999999987776332 233221 111122355677777888877774
No 454
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=59.04 E-value=0.98 Score=48.70 Aligned_cols=57 Identities=14% Similarity=0.144 Sum_probs=16.2
Q ss_pred ccccccCeEEEEEEEEcC-CceEEE------EEeeccccC---hhhHHHHHHHHHHhcCCCceeceEEEEE
Q 005693 391 EVLGKGSYGTAYKAVLEE-STTVVV------KRLKEVVVG---KRDFEQQMEIVGRVGQHPNVVPLRAYYY 451 (682)
Q Consensus 391 ~~lG~G~fg~Vy~~~~~~-~~~vav------K~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~ 451 (682)
+.|| ||+||+|.+.. ..+||+ |..+..... ...+.+|..+...+ +|+|+++.+++..
T Consensus 148 ~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~-~H~niv~~h~f~~ 214 (463)
T 3cxl_A 148 EHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENE-QIPKYEKIHNFKV 214 (463)
T ss_dssp TTSS---BCCC---------CCBGGGC------------------------------------CBCCCEEE
T ss_pred ccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccc-cccccCCCcceEE
Confidence 4566 99999999865 367888 766543322 23566777777777 8999999877764
No 455
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=54.50 E-value=2.4 Score=28.50 Aligned_cols=6 Identities=17% Similarity=0.147 Sum_probs=2.2
Q ss_pred eehhhH
Q 005693 311 AVGGSA 316 (682)
Q Consensus 311 vv~~~~ 316 (682)
++++++
T Consensus 19 vv~Gv~ 24 (41)
T 2k9y_A 19 VAVGVV 24 (41)
T ss_dssp HHHHHH
T ss_pred hhHHHH
Confidence 333333
No 456
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=39.14 E-value=1e+02 Score=33.85 Aligned_cols=47 Identities=19% Similarity=0.147 Sum_probs=34.3
Q ss_pred CHHHHHHHHHHHH--HHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCC
Q 005693 484 DWETRVKILLGTA--RGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTP 537 (682)
Q Consensus 484 ~~~~~~~i~~~ia--~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~ 537 (682)
.+..+..++..+| ..+.|+=.- +|=.++|||++.+|++.=+|||..-
T Consensus 453 ~~~a~~nF~~S~A~ySvv~YILGi-------gDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 453 SAEVMDTYVKSCAGYCVITYILGV-------GDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTC-------CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred cHHHHHHHHHHHHHHhHhheeeec-------cCCCCcceeEcCCCCEeeeehHHhh
Confidence 3555666666654 345666443 3778999999999999999999863
No 457
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=36.15 E-value=51 Score=26.76 Aligned_cols=47 Identities=11% Similarity=0.130 Sum_probs=34.3
Q ss_pred cccccCCccccCCCCCCcEEEccCCCCCCCCCCcCCCCCCCcEEeeccc
Q 005693 127 GLVGPIPNNTLGKLDALEVLSLRSNVLTGGLPSEITSLPSLRYLYLQHN 175 (682)
Q Consensus 127 ~l~g~lp~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N 175 (682)
+++ .|....|.++++|+.+.|-.+ ++..-...|.++++|+.+.+...
T Consensus 7 ~vt-~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 7 PVV-GMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCC-SSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred ccC-EecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 344 566668888889998888765 44344567888888888888654
No 458
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=32.48 E-value=23 Score=26.18 Aligned_cols=17 Identities=53% Similarity=0.774 Sum_probs=8.3
Q ss_pred eeehhhHHHHH-HHHhhh
Q 005693 310 IAVGGSAVLLL-VALVIL 326 (682)
Q Consensus 310 ivv~~~~~~l~-~~~li~ 326 (682)
+++|+++.+++ ..+.++
T Consensus 12 ivlGg~~~lll~~glcI~ 29 (70)
T 2klu_A 12 IVLGGVAGLLLFIGLGIF 29 (70)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHH
Confidence 45565555444 344444
No 459
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=30.23 E-value=5.3 Score=25.77 Aligned_cols=24 Identities=25% Similarity=0.434 Sum_probs=9.3
Q ss_pred eeeeehhhHHHHHHHHhhhhhhccc
Q 005693 308 IAIAVGGSAVLLLVALVILCYCLKK 332 (682)
Q Consensus 308 i~ivv~~~~~~l~~~~li~~~~~rr 332 (682)
++.++| +++++++.+.+..+.+||
T Consensus 11 aagVvg-lll~vii~l~~~~~iRRr 34 (35)
T 1iij_A 11 IATVVG-VLLFLILVVVVGILIKRR 34 (35)
T ss_dssp HHHHHH-HHHHHHHTTTTTHHHHHC
T ss_pred HHHHHH-HHHHHHHHHHhheEEeec
Confidence 333444 333333333333444443
No 460
>2l34_A TYRO protein tyrosine kinase-binding protein; immunoreceptor, transmembrane assembly, DAP12, protein bindi; NMR {Homo sapiens} PDB: 2l35_B
Probab=26.83 E-value=11 Score=23.93 Aligned_cols=26 Identities=27% Similarity=0.484 Sum_probs=14.6
Q ss_pred ccceeeeeeehhhHHHHHHHHhhhhh
Q 005693 303 GLGAIIAIAVGGSAVLLLVALVILCY 328 (682)
Q Consensus 303 ~~~~Ii~ivv~~~~~~l~~~~li~~~ 328 (682)
+.+++.+++++-++..+++++.++++
T Consensus 5 ~~gaIaGIVvgdi~~t~~i~~~vy~~ 30 (33)
T 2l34_A 5 SPGVLAGIVVGDLVLTVLIALAVYFL 30 (33)
T ss_dssp CTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcceEEeEeHHHHHHHHHHHHHHhhe
Confidence 34556667766666555555554443
No 461
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=25.73 E-value=1.6e+02 Score=32.98 Aligned_cols=45 Identities=18% Similarity=0.180 Sum_probs=32.5
Q ss_pred HHHHHHHHHHH--HHHHHHHhcCCCCcEecCCCCCCeEecCCCCeEEeecCCCC
Q 005693 486 ETRVKILLGTA--RGVAHIHSMGGPKFTHGNIKASNVLINQDLDGCISDFGLTP 537 (682)
Q Consensus 486 ~~~~~i~~~ia--~gl~~LH~~~~~~ivHrDLk~~NILl~~~~~~kl~DfGla~ 537 (682)
..+..++..+| ..+.|+=.- +|=.++||||+.+|++.=+|||..-
T Consensus 529 ~ar~nF~~SlA~~Svv~YILGl-------GDRH~~NILid~tG~v~HIDFG~~f 575 (696)
T 2x6h_A 529 EVMDTYIKSCAGYCVITYLLGV-------GDRHLDNLLLTTNGKLFHIDFGYIL 575 (696)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTC-------CCCCTTTEEECTTSCEEECCCCSCT
T ss_pred HHHHHHHHHHHHHHHHHHHccC-------CCCCCcceEEeCCCCEEEEeehhhh
Confidence 44555555554 345555443 4888999999999999999999863
No 462
>2llm_A Amyloid beta A4 protein; alzheimer'S disease, protein fibril; NMR {Homo sapiens} PDB: 2loh_A
Probab=22.73 E-value=27 Score=23.50 Aligned_cols=24 Identities=29% Similarity=0.648 Sum_probs=13.5
Q ss_pred ccceeeeeeehhhHHHHHHHHhhh
Q 005693 303 GLGAIIAIAVGGSAVLLLVALVIL 326 (682)
Q Consensus 303 ~~~~Ii~ivv~~~~~~l~~~~li~ 326 (682)
+.++++++.+++++++.++++.++
T Consensus 15 srga~iGL~v~gVai~~vIVvsl~ 38 (43)
T 2llm_A 15 NKGAIIGLMVGGVVIATVIVITLV 38 (43)
Confidence 456677777666665544444333
Done!