BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005694
(682 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359489412|ref|XP_002273349.2| PREDICTED: ATP-dependent DNA helicase 2 subunit KU80-like [Vitis
vinifera]
Length = 690
Score = 1018 bits (2631), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/690 (71%), Positives = 577/690 (83%), Gaps = 9/690 (1%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR +EALLLLLDVSPSMH+ LP+VEKLCS L+QKKLIY KN EVG++LFGTE+T NELT
Sbjct: 1 MARNKEALLLLLDVSPSMHTFLPEVEKLCSMLLQKKLIYSKNDEVGIVLFGTEDTNNELT 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDY---------MLIKKYGETYKGK 111
KEVGGYEHV VL+ IKVVDG LV++L+ LP+GT AGD+ MLIKK+G T KGK
Sbjct: 61 KEVGGYEHVVVLRHIKVVDGDLVEALQQLPRGTVAGDFLDAIVVGMDMLIKKFGSTNKGK 120
Query: 112 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN 171
K LCLIT ALCP+KDP GTKEDQ+ TIA QM A G++++ IV R LSG MR++ EN
Sbjct: 121 KRLCLITSALCPIKDPYEGTKEDQIGTIAEQMSAHGMKLECIVARGRLSGNVDMRIMDEN 180
Query: 172 DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTG 231
D LL +FS K++AKTL+V++ TSL GA +TR I+PVTIFRGDLELS KM+IKVWVYKKT
Sbjct: 181 DLLLKLFSTKTTAKTLYVETPTSLLGALRTRSIAPVTIFRGDLELSPKMRIKVWVYKKTA 240
Query: 232 EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 291
EE+FPTLK+YSD+AP TDKFATHEVKVD+EYKSVE+ SKVVPPEQRIKGYRYGPQV+PIS
Sbjct: 241 EERFPTLKQYSDQAPPTDKFATHEVKVDFEYKSVEESSKVVPPEQRIKGYRYGPQVIPIS 300
Query: 292 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKE 351
SAEWEAVKFKPEK VKLLGFTDASN++RHYYM DVN+FIAEP N++A +AVSALARAMKE
Sbjct: 301 SAEWEAVKFKPEKGVKLLGFTDASNVMRHYYMHDVNIFIAEPSNTKAMLAVSALARAMKE 360
Query: 352 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFP 411
MNKVAI+RCVWRQGQ SVV+G+LTPNVS+K +IPDSFYFNVLP+AEDVREFQFPSFS P
Sbjct: 361 MNKVAILRCVWRQGQGSVVIGILTPNVSDKDDIPDSFYFNVLPYAEDVREFQFPSFSNLP 420
Query: 412 VSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPP 471
SWQPNE+QQEAADNLVKMLDLAPSG E L P+LTPNP LERFY HLELKS+H DAA P
Sbjct: 421 ASWQPNEEQQEAADNLVKMLDLAPSGSKETLLPDLTPNPVLERFYRHLELKSKHPDAAVP 480
Query: 472 PLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGD 531
PLD+SLKKITEPDP LL++++ IDAF +F +KENPKLKKSTRR LRE+PSG +E
Sbjct: 481 PLDESLKKITEPDPKLLSQNKPIIDAFRRRFELKENPKLKKSTRRLLRERPSGLNEEASM 540
Query: 532 GSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLL 591
G SD QA+ S+E+ V V+KIGD TPIQDFEAMMS RD P+WV KAI +MKNKIF L+
Sbjct: 541 GDGSDGQAIKSIENTSTVGVEKIGDSTPIQDFEAMMSCRDSPEWVGKAINEMKNKIFDLV 600
Query: 592 ENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKKL 651
E+S EG NY KA+E LVALRKGC+LEQEPKQFND L + K C K N ++F + L SK++
Sbjct: 601 EDSYEGDNYLKALEYLVALRKGCVLEQEPKQFNDFLHHLYKYCEKHNLNSFCESLASKEI 660
Query: 652 SLISKSEAVDSDITDDEAGSFIVKSQPKHE 681
LI+K+EA DS++T+DEA S +VK +PK E
Sbjct: 661 MLINKTEAADSEVTEDEARSLMVKKEPKLE 690
>gi|255541318|ref|XP_002511723.1| ku P80 DNA helicase, putative [Ricinus communis]
gi|223548903|gb|EEF50392.1| ku P80 DNA helicase, putative [Ricinus communis]
Length = 684
Score = 1010 bits (2611), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 498/690 (72%), Positives = 576/690 (83%), Gaps = 15/690 (2%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR RE L+LLLDV PSMH+VLP++E++CS LIQKKLIY K+ EVG+++FGTEET NELT
Sbjct: 1 MARNREGLILLLDVGPSMHNVLPEIERICSMLIQKKLIYSKSDEVGIVVFGTEETVNELT 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDY---------MLIKKYGETYKGK 111
EVGGYEHV VLQ++KVVDG LV++L HLP+GT AGDY M+IKKY T KGK
Sbjct: 61 VEVGGYEHVLVLQNMKVVDGDLVEALHHLPRGTVAGDYLDAIVVGMDMMIKKYQLTNKGK 120
Query: 112 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN 171
K LCLITDA P+K+P GTKEDQVSTIA QM A G+RM+ IVVR S + R++ EN
Sbjct: 121 KRLCLITDAGNPIKEPYEGTKEDQVSTIALQMAAHGVRMETIVVRGRPSQDIDQRIVDEN 180
Query: 172 DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTG 231
D+LL++FS+K+SAKT++V+S TSL GA +TR+ISPVTIFRGDLE+S K+KIKVWVYKKT
Sbjct: 181 DHLLHLFSEKTSAKTVYVESPTSLLGALRTRNISPVTIFRGDLEISPKLKIKVWVYKKTS 240
Query: 232 EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 291
EEKFPTLKK SDKAP TDK+ATHEVKVDYEYKSVEDP+KVVPP+QRIKGYRYGPQV+PIS
Sbjct: 241 EEKFPTLKKRSDKAPPTDKYATHEVKVDYEYKSVEDPNKVVPPDQRIKGYRYGPQVIPIS 300
Query: 292 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKE 351
SAE +AVKFKPEKSVKLLGFTDA+NILRHYYMKDVN+FIAEPGN RAT+AVSALARAMKE
Sbjct: 301 SAELDAVKFKPEKSVKLLGFTDAANILRHYYMKDVNIFIAEPGNMRATIAVSALARAMKE 360
Query: 352 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFP 411
M+KVAIVRCVWRQGQ SVVVGVLTPN+SEK PDSFYFNVLPFAEDVREFQFPSFS FP
Sbjct: 361 MDKVAIVRCVWRQGQGSVVVGVLTPNLSEKDKTPDSFYFNVLPFAEDVREFQFPSFSNFP 420
Query: 412 VSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPP 471
SWQP+EQQQEAADNLV MLDLA GK E+L P+ TPNP LERFYHHLELKS+H DAA P
Sbjct: 421 ASWQPSEQQQEAADNLVMMLDLATPGKEEVLLPDFTPNPILERFYHHLELKSKHPDAAVP 480
Query: 472 PLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGD 531
PLD +LKKITEPDP LL+ ++S IDAFC F +KENPK KKSTRRFLREKPSGSD+
Sbjct: 481 PLDRTLKKITEPDPELLSGNKSVIDAFCRSFEVKENPKRKKSTRRFLREKPSGSDDDRDY 540
Query: 532 GSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLL 591
G S A A+ S + V+KIGD P+QDFEAM+SRRD PDWV KAI+DMKNKI+ ++
Sbjct: 541 GDSSIALAIKSGD------VEKIGDSNPVQDFEAMLSRRDNPDWVGKAIKDMKNKIYSIV 594
Query: 592 ENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKKL 651
EN EG NYP+A+E L ALRKGCILEQEPKQFND L + + C+ + +F +FL SK+L
Sbjct: 595 ENCYEGNNYPRALECLAALRKGCILEQEPKQFNDFLHDLFRFCQGKKLGSFCEFLASKEL 654
Query: 652 SLISKSEAVDSDITDDEAGSFIVKSQPKHE 681
+LISKSEA+DS++TDDEA SF VK +PK E
Sbjct: 655 TLISKSEAIDSEVTDDEARSFFVKKEPKIE 684
>gi|296089149|emb|CBI38852.3| unnamed protein product [Vitis vinifera]
Length = 673
Score = 988 bits (2554), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 478/673 (71%), Positives = 561/673 (83%), Gaps = 9/673 (1%)
Query: 18 MHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKV 77
MH+ LP+VEKLCS L+QKKLIY KN EVG++LFGTE+T NELTKEVGGYEHV VL+ IKV
Sbjct: 1 MHTFLPEVEKLCSMLLQKKLIYSKNDEVGIVLFGTEDTNNELTKEVGGYEHVVVLRHIKV 60
Query: 78 VDGHLVQSLKHLPQGTCAGDY---------MLIKKYGETYKGKKHLCLITDALCPLKDPD 128
VDG LV++L+ LP+GT AGD+ MLIKK+G T KGKK LCLIT ALCP+KDP
Sbjct: 61 VDGDLVEALQQLPRGTVAGDFLDAIVVGMDMLIKKFGSTNKGKKRLCLITSALCPIKDPY 120
Query: 129 VGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLF 188
GTKEDQ+ TIA QM A G++++ IV R LSG MR++ END LL +FS K++AKTL+
Sbjct: 121 EGTKEDQIGTIAEQMSAHGMKLECIVARGRLSGNVDMRIMDENDLLLKLFSTKTTAKTLY 180
Query: 189 VDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPST 248
V++ TSL GA +TR I+PVTIFRGDLELS KM+IKVWVYKKT EE+FPTLK+YSD+AP T
Sbjct: 181 VETPTSLLGALRTRSIAPVTIFRGDLELSPKMRIKVWVYKKTAEERFPTLKQYSDQAPPT 240
Query: 249 DKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKL 308
DKFATHEVKVD+EYKSVE+ SKVVPPEQRIKGYRYGPQV+PISSAEWEAVKFKPEK VKL
Sbjct: 241 DKFATHEVKVDFEYKSVEESSKVVPPEQRIKGYRYGPQVIPISSAEWEAVKFKPEKGVKL 300
Query: 309 LGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQS 368
LGFTDASN++RHYYM DVN+FIAEP N++A +AVSALARAMKEMNKVAI+RCVWRQGQ S
Sbjct: 301 LGFTDASNVMRHYYMHDVNIFIAEPSNTKAMLAVSALARAMKEMNKVAILRCVWRQGQGS 360
Query: 369 VVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV 428
VV+G+LTPNVS+K +IPDSFYFNVLP+AEDVREFQFPSFS P SWQPNE+QQEAADNLV
Sbjct: 361 VVIGILTPNVSDKDDIPDSFYFNVLPYAEDVREFQFPSFSNLPASWQPNEEQQEAADNLV 420
Query: 429 KMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLL 488
KMLDLAPSG E L P+LTPNP LERFY HLELKS+H DAA PPLD+SLKKITEPDP LL
Sbjct: 421 KMLDLAPSGSKETLLPDLTPNPVLERFYRHLELKSKHPDAAVPPLDESLKKITEPDPKLL 480
Query: 489 AESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNSMESKPV 548
++++ IDAF +F +KENPKLKKSTRR LRE+PSG +E G SD QA+ S+E+
Sbjct: 481 SQNKPIIDAFRRRFELKENPKLKKSTRRLLRERPSGLNEEASMGDGSDGQAIKSIENTST 540
Query: 549 VTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLV 608
V V+KIGD TPIQDFEAMMS RD P+WV KAI +MKNKIF L+E+S EG NY KA+E LV
Sbjct: 541 VGVEKIGDSTPIQDFEAMMSCRDSPEWVGKAINEMKNKIFDLVEDSYEGDNYLKALEYLV 600
Query: 609 ALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKKLSLISKSEAVDSDITDDE 668
ALRKGC+LEQEPKQFND L + K C K N ++F + L SK++ LI+K+EA DS++T+DE
Sbjct: 601 ALRKGCVLEQEPKQFNDFLHHLYKYCEKHNLNSFCESLASKEIMLINKTEAADSEVTEDE 660
Query: 669 AGSFIVKSQPKHE 681
A S +VK +PK E
Sbjct: 661 ARSLMVKKEPKLE 673
>gi|224130002|ref|XP_002320725.1| predicted protein [Populus trichocarpa]
gi|222861498|gb|EEE99040.1| predicted protein [Populus trichocarpa]
Length = 700
Score = 975 bits (2520), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 484/708 (68%), Positives = 572/708 (80%), Gaps = 35/708 (4%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR +E L+LLLDV P+M+SVLP+++K+CS LIQKKLIYGK EVGV++FGT+ET+NELT
Sbjct: 1 MARNKEGLVLLLDVGPTMYSVLPEIKKVCSMLIQKKLIYGKFDEVGVVVFGTQETDNELT 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDY---------------------- 98
KEVGGYEHV VL++IKVVDG LV + + LP+G GD
Sbjct: 61 KEVGGYEHVVVLRNIKVVDGDLVDAFQELPRGNFDGDCIHWIFLYYLFWKFMLCADLDAI 120
Query: 99 -----MLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNI 153
MLIKKY T KGKK LCLIT+ALCP+KD GTKEDQV+TIA QM A G++M+++
Sbjct: 121 VVGMDMLIKKYQATNKGKKRLCLITNALCPIKDSCEGTKEDQVNTIAAQMSAHGMKMESV 180
Query: 154 VVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGD 213
+VR L G R++ END LLN+FS+K+SA+ ++V+S T+L GA KTR+ISPVTIFRGD
Sbjct: 181 IVRGRLCGGGDQRIMAENDRLLNLFSEKTSARAVYVESPTALLGAVKTRNISPVTIFRGD 240
Query: 214 LELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVP 273
LEL KMKIKVWVYKKT EEKFPTLKKYSDKAP TD+FATHEVKVDYEYKSVEDP+KVVP
Sbjct: 241 LELGSKMKIKVWVYKKTSEEKFPTLKKYSDKAPPTDRFATHEVKVDYEYKSVEDPNKVVP 300
Query: 274 PEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP 333
PEQRIKGYRYGPQVVPISSAEW+AVKFKPEKSVKLLGFTDASNI+RHYYMKDVN+FI EP
Sbjct: 301 PEQRIKGYRYGPQVVPISSAEWDAVKFKPEKSVKLLGFTDASNIMRHYYMKDVNVFIPEP 360
Query: 334 GNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVL 393
GN+RA +AVSALARAMKEMNKVAI+RCVWRQGQ SVVVGVLTPN+SEK + PDSFYFNVL
Sbjct: 361 GNARAALAVSALARAMKEMNKVAILRCVWRQGQGSVVVGVLTPNISEKDSTPDSFYFNVL 420
Query: 394 PFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALE 453
PFAEDVREFQFPSFS FP SWQPNEQQQEAADNLVKMLDLAPS K E L P+ TPNP LE
Sbjct: 421 PFAEDVREFQFPSFSSFPASWQPNEQQQEAADNLVKMLDLAPSTKQEALLPDFTPNPVLE 480
Query: 454 RFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKS 513
RFY HLELKS+H DAA PPLD++LK ITE DP LL+E ++ +DAF F +KENP+LKKS
Sbjct: 481 RFYRHLELKSKHPDAAVPPLDETLKTITEADPDLLSEKKNVMDAFYKSFELKENPRLKKS 540
Query: 514 TRRFLREKPSGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCP 573
++R L +KPSGSDE + D + N++ KP V V+KIGD +P+QDFEAMMS RD P
Sbjct: 541 SKRLLEKKPSGSDEDHQDTT-------NALVVKP-VKVEKIGDSSPVQDFEAMMSCRDSP 592
Query: 574 DWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKI 633
DWV KAI+DMKNKI+ L+ENS +G N+ KA+E L+ALRKGCILEQEPKQFND L + +
Sbjct: 593 DWVSKAIQDMKNKIYSLVENSYDGDNHGKALECLLALRKGCILEQEPKQFNDFLHHLFNV 652
Query: 634 CRKRNFSTFFDFLMSKKLSLISKSEAVDSDITDDEAGSFIVKSQPKHE 681
+++ F F + L+ K L+LISKSEA+DS++TDDEA +F+VK + K E
Sbjct: 653 RQEKKFRNFCESLIPKGLTLISKSEAIDSEVTDDEARNFLVKKELKFE 700
>gi|449433125|ref|XP_004134348.1| PREDICTED: ATP-dependent DNA helicase 2 subunit KU80-like [Cucumis
sativus]
Length = 691
Score = 947 bits (2448), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/690 (66%), Positives = 559/690 (81%), Gaps = 10/690 (1%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR RE L+L+LDV PSMHS+LP+VEK+CS L++KKL+Y K EVG++LFGTE+T+NELT
Sbjct: 1 MARNREILVLVLDVGPSMHSILPEVEKVCSMLVEKKLLYNKYDEVGIVLFGTEDTKNELT 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDY---------MLIKKYGETYKGK 111
+EVGGY+HV VLQ +KVVDG LV LKH+P+GT +GD+ MLIKK+GET +GK
Sbjct: 61 EEVGGYQHVVVLQKMKVVDGDLVDVLKHIPRGTVSGDFLDAIIVGMDMLIKKFGETERGK 120
Query: 112 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN 171
K LCL+TDAL P+K+P GTKEDQV+TIA+QM G+RM ++VVR + + + EN
Sbjct: 121 KRLCLVTDALFPIKEPYEGTKEDQVTTIAQQMTKHGIRMDSVVVRGRFGQDAIEKTMNEN 180
Query: 172 DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTG 231
D LLNIFS+K++AK ++V+S TSL GA +TR I+PVTIFRGDLE+S +KIKVWVYKKT
Sbjct: 181 DLLLNIFSRKTNAKMVYVESPTSLLGAIRTRSIAPVTIFRGDLEISSVIKIKVWVYKKTS 240
Query: 232 EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 291
EEKFPTLK+YSDKAP TDKFATHEVKVDYEYKS E+PSKVVPPE RIKGYRYGPQVVPIS
Sbjct: 241 EEKFPTLKRYSDKAPLTDKFATHEVKVDYEYKSAEEPSKVVPPELRIKGYRYGPQVVPIS 300
Query: 292 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKE 351
+AEW+AVKFK EKSVKLLGFT+A +I+RHYYMKDVN+FIAEPGN R+ VAVSALARAMKE
Sbjct: 301 TAEWDAVKFKTEKSVKLLGFTNAFHIMRHYYMKDVNVFIAEPGNKRSIVAVSALARAMKE 360
Query: 352 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFP 411
M+KVAIVRCVWRQGQ SVVVGVLTPN+SEK I DS +FNVLPFAEDVREFQFPSFS P
Sbjct: 361 MDKVAIVRCVWRQGQGSVVVGVLTPNISEKDGIADSLFFNVLPFAEDVREFQFPSFSNLP 420
Query: 412 VSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPP 471
QP+E+QQEAAD+ VKMLDLAP G+ EILQP+ TPNP LERFY HLE+KS+ DAA P
Sbjct: 421 ALMQPSEEQQEAADDFVKMLDLAPDGREEILQPDFTPNPVLERFYRHLEVKSKDPDAAVP 480
Query: 472 PLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGD 531
PLD +L+KITEPDP L +++QS I+ F +F +KENPKLKKS R +LREK SGS + +
Sbjct: 481 PLDGTLQKITEPDPDLFSQNQSVINTFHKRFELKENPKLKKSRRHYLREKASGSSDKEDN 540
Query: 532 GSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLL 591
+S AQ V S+ + P V V+KIGD TP++DFEAMMSRRD P+W+ KAI M +KIF L+
Sbjct: 541 EEIS-AQIVESVANMPTVKVEKIGDTTPLEDFEAMMSRRDSPEWISKAISGMMSKIFDLI 599
Query: 592 ENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKKL 651
+NS++G +Y KA+E L ALRKGCI+EQEPKQFND L + ++N TF +FL S+++
Sbjct: 600 KNSSDGHSYTKAIEYLRALRKGCIIEQEPKQFNDFLRHLRNFYPEKNLHTFCEFLASQQI 659
Query: 652 SLISKSEAVDSDITDDEAGSFIVKSQPKHE 681
SLISK EA DS++ DDEA F VK +PK E
Sbjct: 660 SLISKEEAADSEVGDDEARRFWVKMEPKSE 689
>gi|449525249|ref|XP_004169630.1| PREDICTED: ATP-dependent DNA helicase 2 subunit KU80-like [Cucumis
sativus]
Length = 691
Score = 944 bits (2439), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/690 (66%), Positives = 558/690 (80%), Gaps = 10/690 (1%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR RE L+L+LDV PSMHS+LP+VEK+CS L++KKL+Y K EVG++LF TE+T+NELT
Sbjct: 1 MARNREILVLVLDVGPSMHSILPEVEKVCSMLVEKKLLYNKYDEVGIVLFRTEDTKNELT 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDY---------MLIKKYGETYKGK 111
+EVGGY+HV VLQ +KVVDG LV LKH+P+GT +GD+ MLIKK+GET +GK
Sbjct: 61 EEVGGYQHVVVLQKMKVVDGDLVDVLKHIPRGTVSGDFLDAIIVGMDMLIKKFGETERGK 120
Query: 112 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN 171
K LCL+TDAL P+K+P GTKEDQV+TIA+QM G+RM ++VVR + + + EN
Sbjct: 121 KRLCLVTDALFPIKEPYEGTKEDQVTTIAQQMTKHGIRMDSVVVRGRFGQDAIEKTMNEN 180
Query: 172 DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTG 231
D LLNIFS+K++AK ++V+S TSL GA +TR I+PVTIFRGDLE+S +KIKVWVYKKT
Sbjct: 181 DLLLNIFSRKTNAKMVYVESPTSLLGAIRTRSIAPVTIFRGDLEISSVIKIKVWVYKKTS 240
Query: 232 EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 291
EEKFPTLK+YSDKAP TDKFATHEVKVDYEYKS E+PSKVVPPE RIKGYRYGPQVVPIS
Sbjct: 241 EEKFPTLKRYSDKAPLTDKFATHEVKVDYEYKSAEEPSKVVPPELRIKGYRYGPQVVPIS 300
Query: 292 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKE 351
+AEW+AVKFK EKSVKLLGFT+A +I+RHYYMKDVN+FIAEPGN R+ VAVSALARAMKE
Sbjct: 301 TAEWDAVKFKTEKSVKLLGFTNAFHIMRHYYMKDVNVFIAEPGNKRSIVAVSALARAMKE 360
Query: 352 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFP 411
M+KVAIVRCVWRQGQ SVVVGVLTPN+SEK I DS +FNVLPFAEDVREFQFPSFS P
Sbjct: 361 MDKVAIVRCVWRQGQGSVVVGVLTPNISEKDGIADSLFFNVLPFAEDVREFQFPSFSNLP 420
Query: 412 VSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPP 471
QP+E+QQEAAD+ VKMLDLAP G+ EILQP+ TPNP LERFY HLE+KS+ DAA P
Sbjct: 421 ALMQPSEEQQEAADDFVKMLDLAPDGREEILQPDFTPNPVLERFYRHLEVKSKDPDAAVP 480
Query: 472 PLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGD 531
PLD +L+KITEPDP L +++QS I+ F +F +KENPKLKKS R +LREK SGS + +
Sbjct: 481 PLDGTLQKITEPDPDLFSQNQSVINTFHKRFELKENPKLKKSRRHYLREKASGSSDKEDN 540
Query: 532 GSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLL 591
+S AQ V S+ + P V V+KIGD TP++DFEAMMSRRD P+W+ KAI M +KIF L+
Sbjct: 541 EEIS-AQIVESVANMPTVKVEKIGDTTPLEDFEAMMSRRDSPEWISKAISGMMSKIFDLI 599
Query: 592 ENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKKL 651
+NS++G +Y KA+E L ALRKGCI+EQEPKQFND L + ++N TF +FL S+++
Sbjct: 600 KNSSDGHSYTKAIEYLRALRKGCIIEQEPKQFNDFLRHLRNFYPEKNLHTFCEFLASQQI 659
Query: 652 SLISKSEAVDSDITDDEAGSFIVKSQPKHE 681
SLISK EA DS++ DDEA F VK +PK E
Sbjct: 660 SLISKEEAADSEVGDDEARRFWVKMEPKSE 689
>gi|357469575|ref|XP_003605072.1| ATP-dependent DNA helicase 2 subunit [Medicago truncatula]
gi|355506127|gb|AES87269.1| ATP-dependent DNA helicase 2 subunit [Medicago truncatula]
Length = 683
Score = 915 bits (2364), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/688 (65%), Positives = 564/688 (81%), Gaps = 16/688 (2%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR +EALLLLLDV PSMH VLP+VEK+CS L+QKKLIY K EVG++LFGTE+T+NELT
Sbjct: 1 MARNKEALLLLLDVGPSMHPVLPEVEKVCSMLVQKKLIYNKYDEVGIVLFGTEDTDNELT 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDY---------MLIKKYGETYKGK 111
EVGGY+HV V ++ KVVDG +V++L+ LP+GT GD+ MLIKK+G+T KGK
Sbjct: 61 TEVGGYQHVVVSKNSKVVDGDIVEALQQLPRGTTDGDFLDAVIVAMDMLIKKFGDTNKGK 120
Query: 112 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN 171
K LCLIT+A CP+KDP G+KE+QV+TIA+QM A G++M++I+VR LS + + ++ EN
Sbjct: 121 KRLCLITNAQCPIKDPYEGSKEEQVTTIAKQMTAHGMKMESIIVRGKLSQDANKEIMDEN 180
Query: 172 DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTG 231
D LLNIFSK++ + L+V+ SL GA KTR+I+PVT+FRGDLELS K++IKV VYKKT
Sbjct: 181 DRLLNIFSKETQTRLLYVEDPISLFGALKTRNITPVTVFRGDLELSPKLRIKVMVYKKTQ 240
Query: 232 EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 291
EEKFPTLKK+SDKAP TDKFATHEVKVDYEYKS DP KVVPP+QRIKGYRYGPQ++PIS
Sbjct: 241 EEKFPTLKKFSDKAPQTDKFATHEVKVDYEYKSSADPDKVVPPDQRIKGYRYGPQIIPIS 300
Query: 292 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKE 351
SAEW+AVKFKPEK VKLLGFTD+SNILRH YMKDV +FIAEPGN++A +AVSAL+RAMKE
Sbjct: 301 SAEWDAVKFKPEKGVKLLGFTDSSNILRHQYMKDVYVFIAEPGNTKAVLAVSALSRAMKE 360
Query: 352 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFP 411
MNKVAI+RCVWRQGQ +VV+GVLTPNVS++ N+PDSFYFN+LPFAEDVREFQFPSFS FP
Sbjct: 361 MNKVAILRCVWRQGQANVVIGVLTPNVSDRENLPDSFYFNILPFAEDVREFQFPSFSSFP 420
Query: 412 VSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPP 471
S QPNEQQ E+A N +KMLDLAP GK E+L P+ TPNP L RFYH+L+LKS+H DA+ P
Sbjct: 421 ASCQPNEQQLESAANFIKMLDLAPDGKQEVLLPDFTPNPVLARFYHYLDLKSKHPDASVP 480
Query: 472 PLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGD 531
PLD +L+KITEP+ L+ ++QS ID++ F ++ NP LKK RRFLR K S + G
Sbjct: 481 PLDYTLRKITEPETDLVLQNQSVIDSYRRSFEMQGNP-LKKP-RRFLRGKTSDEE---GK 535
Query: 532 GSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLL 591
+++ A N +E + V+KIGDLTP+QDFEAM+SRRD PDWV KAI+DMK+KIF ++
Sbjct: 536 ENIT-APPANLIEYTS-IKVEKIGDLTPVQDFEAMISRRDSPDWVVKAIKDMKDKIFDMV 593
Query: 592 ENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKKL 651
E+S+EG NYPKA++ LVALRKGCILEQEPKQFND L+ +C C+++N +F + L +K L
Sbjct: 594 EDSHEGDNYPKALDCLVALRKGCILEQEPKQFNDFLKHLCNFCQEKNLQSFCEHLAAKGL 653
Query: 652 SLISKSEAVDSDITDDEAGSFIVKSQPK 679
+LI K+EA+DSD++D+EA SF+VKS+ K
Sbjct: 654 TLIPKTEAIDSDVSDEEARSFLVKSESK 681
>gi|19401142|gb|AAL87543.1|AF293343_1 KAP-2 [Medicago truncatula]
Length = 683
Score = 912 bits (2356), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/688 (65%), Positives = 563/688 (81%), Gaps = 16/688 (2%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR +EALLLLLDV PSMH VLP+VEK+CS L+QKKLIY K EVG++LFGTE+T+NELT
Sbjct: 1 MARNKEALLLLLDVGPSMHPVLPEVEKVCSMLVQKKLIYNKYDEVGIVLFGTEDTDNELT 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDY---------MLIKKYGETYKGK 111
EVGGY+HV V ++ KVVDG +V++L+ LP+GT GD+ MLIKK+G+T KGK
Sbjct: 61 TEVGGYQHVVVSKNSKVVDGDIVEALQQLPRGTTDGDFLDAVIVAMDMLIKKFGDTNKGK 120
Query: 112 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN 171
K LCLIT+A CP+KDP G+KE+QV+TIA+QM A G++M++I+VR LS + + ++ EN
Sbjct: 121 KRLCLITNAQCPIKDPYEGSKEEQVTTIAKQMTAHGMKMESIIVRGKLSQDANKEIMDEN 180
Query: 172 DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTG 231
D LLNIFSK++ + L+V+ SL GA KTR+I+PVT+FRGDLELS K++IKV VYKKT
Sbjct: 181 DRLLNIFSKETQTRLLYVEDPISLFGALKTRNITPVTVFRGDLELSPKLRIKVMVYKKTQ 240
Query: 232 EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 291
EEKFPTLKK+SDKAP TDKFATHEVKVDYEYKS DP VVPP+QRIKGYRYGPQ++PIS
Sbjct: 241 EEKFPTLKKFSDKAPQTDKFATHEVKVDYEYKSSADPDIVVPPDQRIKGYRYGPQIIPIS 300
Query: 292 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKE 351
SAEW+AVKFKPEK VKLLGFTD+SNILRH YMKDV +FIAEPGN++A +AVSAL+RAMKE
Sbjct: 301 SAEWDAVKFKPEKGVKLLGFTDSSNILRHQYMKDVYVFIAEPGNTKAVLAVSALSRAMKE 360
Query: 352 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFP 411
MNKVAI+RCVWRQGQ +VV+GVLTPNVS++ N+PDSFYFN+LPFAEDVREFQFPSFS FP
Sbjct: 361 MNKVAILRCVWRQGQANVVIGVLTPNVSDRENLPDSFYFNILPFAEDVREFQFPSFSSFP 420
Query: 412 VSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPP 471
S QPNEQQ E+A N +KMLDLAP GK E+L P+ TPNP L RFYH+L+LKS+H DA+ P
Sbjct: 421 ASCQPNEQQLESAANFIKMLDLAPDGKQEVLLPDFTPNPVLARFYHYLDLKSKHPDASVP 480
Query: 472 PLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGD 531
PLD +L+KITEP+ L+ ++QS ID++ F ++ NP LKK RRFLR K S + G
Sbjct: 481 PLDYTLRKITEPETDLVLQNQSVIDSYRRSFEMQGNP-LKKP-RRFLRGKTSDEE---GK 535
Query: 532 GSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLL 591
+++ A N +E + V+KIGDLTP+QDFEAM+SRRD PDWV KAI+DMK+KIF ++
Sbjct: 536 ENIT-APPANLIEYTS-IKVEKIGDLTPVQDFEAMISRRDSPDWVVKAIKDMKDKIFDMV 593
Query: 592 ENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKKL 651
E+S+EG NYPKA++ LVALRKGCILEQEPKQFND L+ +C C+++N +F + L +K L
Sbjct: 594 EDSHEGDNYPKALDCLVALRKGCILEQEPKQFNDFLKHLCNFCQEKNLQSFCEHLAAKGL 653
Query: 652 SLISKSEAVDSDITDDEAGSFIVKSQPK 679
+LI K+EA+DSD++D+EA SF+VKS+ K
Sbjct: 654 TLIPKTEAIDSDVSDEEARSFLVKSESK 681
>gi|356512141|ref|XP_003524779.1| PREDICTED: ATP-dependent DNA helicase 2 subunit KU80-like [Glycine
max]
Length = 687
Score = 895 bits (2312), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/689 (63%), Positives = 553/689 (80%), Gaps = 14/689 (2%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR +EALLLLLDV PSMH L ++EK+CS L+ KKLIY K EVG++LFGTE+T NELT
Sbjct: 1 MARNKEALLLLLDVGPSMHPALSEIEKVCSMLVHKKLIYSKYDEVGIVLFGTEDTNNELT 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDYM---------LIKKYGETYKGK 111
EVGGY+HV VL++IKVVDG +V++L+ LP+GT GD++ L+KK+G T KGK
Sbjct: 61 TEVGGYQHVVVLKNIKVVDGDIVEALQQLPRGTTDGDFLDAVIVGMDVLVKKFGVTNKGK 120
Query: 112 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN 171
K +CLIT+A C +K+ D GTKE+QV+TIA+QM A G++M++I++R LS + + ++ EN
Sbjct: 121 KRVCLITNAQCQIKESDEGTKEEQVTTIAKQMTAHGIKMESIIMRGKLSQDANKGIMDEN 180
Query: 172 DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTG 231
D LLNIFSK++S + L+V++ SL GA +TR+I+ VT+FRG LE+S K+ IKV VYKKT
Sbjct: 181 DRLLNIFSKETSTRLLYVENPISLFGALRTRNIALVTVFRGHLEISPKLSIKVMVYKKTT 240
Query: 232 EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 291
EEKFP++KKYSDKAP DKFA HEVK+DYE+KS +DP KVVPP+QRIKGY YGPQ+VPIS
Sbjct: 241 EEKFPSMKKYSDKAPPNDKFAKHEVKIDYEHKSSKDPDKVVPPDQRIKGYPYGPQIVPIS 300
Query: 292 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKE 351
SAEWEAVKFKPEK VKL+GFTD+SN+ RH+YMKDV +F+ EPGN+RA +AVSA+ARAMKE
Sbjct: 301 SAEWEAVKFKPEKGVKLMGFTDSSNVFRHHYMKDVYVFLPEPGNTRAMIAVSAVARAMKE 360
Query: 352 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFP 411
MNKVAIVRCVWRQGQ +VV+GVLTPN+S+K NIPDSFY NVLPFAEDVREFQFPSF+ FP
Sbjct: 361 MNKVAIVRCVWRQGQANVVIGVLTPNLSDKENIPDSFYLNVLPFAEDVREFQFPSFTNFP 420
Query: 412 VSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPP 471
SWQPN QQ EAA NL+K LDLAP G+ E+L P+ TPNP LERFY +LELKS+ D A P
Sbjct: 421 ASWQPNGQQLEAAANLIKTLDLAPHGQEEVLLPDFTPNPVLERFYRYLELKSKDPDVAVP 480
Query: 472 PLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGD 531
PLD +LKKITEPD LL +++S ID+FC F +K NP LKKS RR L K S S++
Sbjct: 481 PLDGTLKKITEPDTDLLLQNKSEIDSFCRSFELKGNP-LKKS-RRLLGGKRSFSNDEEVK 538
Query: 532 GSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLL 591
G+++ AQ N + V V KIGDLTP+Q FEA++SRRD PDWV KAI +MKNKIF L+
Sbjct: 539 GNIT-AQPAN-LTGNASVNVGKIGDLTPVQYFEALISRRDSPDWVVKAINEMKNKIFDLV 596
Query: 592 ENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKKL 651
E+S+EG NYPKA+E LVALRKGCILEQEP+QFND L+ + C+++N +F ++L SK+L
Sbjct: 597 EDSHEGDNYPKALECLVALRKGCILEQEPEQFNDFLKHLWNFCQEKNLPSFCEYLASKEL 656
Query: 652 SLISKSEAVDSDITDDEA-GSFIVKSQPK 679
+LISK+EA+DS+ TDD+A F+VKS+PK
Sbjct: 657 TLISKTEAIDSENTDDKARKGFLVKSEPK 685
>gi|225453905|ref|XP_002273329.1| PREDICTED: ATP-dependent DNA helicase 2 subunit KU80-like [Vitis
vinifera]
Length = 688
Score = 885 bits (2287), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/690 (63%), Positives = 551/690 (79%), Gaps = 17/690 (2%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
M R +EAL+LLLDVSP MH+ LP+VEKLC L+QKKLIY K VG++LFGT+ T+NELT
Sbjct: 1 MIRNQEALVLLLDVSPPMHNFLPEVEKLCFMLLQKKLIYNKKDLVGIVLFGTKVTKNELT 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDY---------MLIKKYGETYKGK 111
K+VGGY++V V QDIKVVDG LV++++ LP+GT AGD+ MLIKK+ T +GK
Sbjct: 61 KKVGGYKYVLVSQDIKVVDGDLVEAVRELPRGTFAGDFLDAIVVGMDMLIKKFLLTKRGK 120
Query: 112 --KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVII 169
K LCLIT ALCP K P G KED++ TIA QM A G+R++ IV R LSG +MR++
Sbjct: 121 IKKRLCLITSALCPTKGPYKGAKEDEIGTIAEQMTAHGIRLECIVARGRLSGNMNMRIME 180
Query: 170 ENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKK 229
END LL +FSKK+ AKT++V+S TSL GA +TR+++PVTIFRGDLELS KM+IKVWVYKK
Sbjct: 181 ENDLLLKLFSKKTIAKTVYVESPTSLLGALRTRNVAPVTIFRGDLELSPKMEIKVWVYKK 240
Query: 230 TGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVP 289
+ EE P LK YSD+AP TDKFATHEV+V+ +YKSVEDP+KVVP QRI+GY YGPQVVP
Sbjct: 241 SAEE-LPVLKLYSDEAPPTDKFATHEVRVNLQYKSVEDPTKVVPLTQRIQGYSYGPQVVP 299
Query: 290 ISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAM 349
ISSAEWEAVKF+PEK VKLLGFTDASNI+RHYY KDVN+FIAEPGN++A +AVSALARAM
Sbjct: 300 ISSAEWEAVKFEPEKGVKLLGFTDASNIMRHYYKKDVNIFIAEPGNTKAILAVSALARAM 359
Query: 350 KEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK 409
KEMNKVAI+RCVWR+ Q++V++G+LTPNVSEK ++PDSFYFNVLP+AEDV+EFQFPSFS
Sbjct: 360 KEMNKVAILRCVWRRKQRNVIIGILTPNVSEKDSVPDSFYFNVLPYAEDVQEFQFPSFSN 419
Query: 410 FPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAA 469
P+SWQPNE+QQEAAD+LV+ML LAP G+ E L P++TPNP LERFY +LELKS+ AA
Sbjct: 420 LPLSWQPNEEQQEAADDLVQMLYLAPFGREESLLPDVTPNPVLERFYRYLELKSKKPYAA 479
Query: 470 PPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPN 529
PP+D +LK ITEPDP LLA+++S ID F +F +K+NPKLKKST R++ SG E
Sbjct: 480 VPPVDKTLKTITEPDPKLLAQNKSIIDEFKRRFELKQNPKLKKST----RDRQSGVKEEA 535
Query: 530 GDGSVSDAQAVNSMESKPVVT-VDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIF 588
G SDA A+NS+E+ V+T V KIGD TPIQDFEAMMS R+ P+WV KAI++MKNKIF
Sbjct: 536 NIGESSDAGAINSVENTSVITMVKKIGDSTPIQDFEAMMSHRESPEWVGKAIKEMKNKIF 595
Query: 589 GLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMS 648
L++NSNE N+ KA++ LVA RKGCILEQ+P +FN+ L + K C+ N ++F + L S
Sbjct: 596 DLVQNSNERDNHLKALDCLVAFRKGCILEQKPTEFNNFLLHIYKFCKYHNLNSFCESLAS 655
Query: 649 KKLSLISKSEAVDSDITDDEAGSFIVKSQP 678
++ LI K+E DS++T+D A +F+VK +P
Sbjct: 656 NEIMLIPKTEVTDSEVTEDGARNFMVKKEP 685
>gi|19401144|gb|AAL87544.1|AF293344_1 KAP-2 [Phaseolus vulgaris]
Length = 686
Score = 884 bits (2284), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/689 (62%), Positives = 549/689 (79%), Gaps = 14/689 (2%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
M ++ALLLLLDV PSMH VLP++EK CS L+QKKL++ KN EVG++LFGTE+T+NELT
Sbjct: 1 MPPIKDALLLLLDVGPSMHYVLPEIEKACSLLVQKKLVFSKNDEVGIVLFGTEDTDNELT 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDY---------MLIKKYGETYKGK 111
EVGGY+HV VL++ KVVDG +V++L+HLP+GT GD+ +LIKK+G+T KGK
Sbjct: 61 TEVGGYQHVVVLKNTKVVDGDIVEALQHLPRGTTDGDFVDAVIVGMNLLIKKFGQTNKGK 120
Query: 112 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN 171
K +CLIT+A CP+K+ GTKE+QV+TIA+Q+ A G++M++I+VR LS + + ++ EN
Sbjct: 121 KRICLITNAQCPIKESYEGTKEEQVTTIAKQLTAHGMKMESIIVRGKLSQDANKGIMDEN 180
Query: 172 DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTG 231
D LLNIFSK++S + L++++ SL GA KTR+I+ VT+FRGDLE+S K+ IKV VYKKT
Sbjct: 181 DRLLNIFSKETSTRLLYLENPISLFGALKTRNITLVTVFRGDLEISPKLSIKVMVYKKTA 240
Query: 232 EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVV-PPEQRIKGYRYGPQVVPI 290
EEKFPTLKKY+DKAP DKFAT EVK+DYEYKS EDP KVV PP+QRI+GY YGPQ+VP+
Sbjct: 241 EEKFPTLKKYTDKAPPNDKFATREVKIDYEYKSSEDPDKVVVPPDQRIRGYPYGPQIVPL 300
Query: 291 SSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMK 350
S++ W+A KF PEK VKLLGFTD+SN+ RH+YMKDV +F+ +PGN+RA +AVS+LARAMK
Sbjct: 301 STSHWDAFKFLPEKGVKLLGFTDSSNVFRHHYMKDVYVFLPQPGNTRAMLAVSSLARAMK 360
Query: 351 EMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKF 410
EM+KVAI+RCVWRQGQ +VV+GVLTPN+S+K NIPDSFY NVLPFAEDVREFQF SFS F
Sbjct: 361 EMDKVAILRCVWRQGQANVVIGVLTPNLSDKENIPDSFYLNVLPFAEDVREFQFHSFSNF 420
Query: 411 PVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAP 470
P SW PN QQ EAA NLVK LDLAP G+ E+L P+ T NP LERFY LE KS+ D A
Sbjct: 421 PASWLPNGQQLEAAANLVKALDLAPDGQEEVLLPDFTANPVLERFYRFLEQKSKDPDIAV 480
Query: 471 PPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNG 530
PPLDD+LKKITEPD LL +++S ID+FC F +K NP LKKS R F ++ +DE
Sbjct: 481 PPLDDTLKKITEPDADLLLQNKSVIDSFCRSFELKGNP-LKKSRRLFGGKRSFSNDEEIK 539
Query: 531 DGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGL 590
+ A+ N +E+ V V+KIGDLTP QDFEA++SRRD PDWV KAI +MKNKIF L
Sbjct: 540 ENIT--AEPPNLIENAS-VKVEKIGDLTPAQDFEALISRRDSPDWVVKAINEMKNKIFDL 596
Query: 591 LENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKK 650
+E+S+EG NYPKA+E LV LRKGCILEQEPKQFND L+ +C C++++ +F +L SK
Sbjct: 597 VEDSHEGDNYPKALECLVVLRKGCILEQEPKQFNDFLKHLCNFCQEKSLHSFCQYLASKD 656
Query: 651 LSLISKSEAVDSDITDDEAGSFIVKSQPK 679
L+LISK+EAVDSD+TD+EA SF+VKS+PK
Sbjct: 657 LTLISKTEAVDSDVTDEEARSFLVKSEPK 685
>gi|61338429|gb|AAX43993.1| Ku80-like [Vigna radiata]
Length = 673
Score = 854 bits (2207), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/690 (61%), Positives = 537/690 (77%), Gaps = 26/690 (3%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
M ++ALLLLLDV PSMHSVLP++EK CS L+QKK+IY KN EVG++LFG E+T+NELT
Sbjct: 1 MPPIKDALLLLLDVGPSMHSVLPEIEKACSLLVQKKMIYSKNDEVGIVLFGAEDTDNELT 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDY---------MLIKKYGETYKGK 111
EVGGY+HV VL+ IKVVDG ++++L+ LP+GT D+ MLIKK+ +T KGK
Sbjct: 61 TEVGGYQHVVVLKKIKVVDGDILEALQQLPRGTTDADFLDAVIVGMDMLIKKFDQTNKGK 120
Query: 112 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN 171
K LCLIT+A CP+K+P GTKE+QV+ IA+Q+ A G++M++I+ R L + + ++ EN
Sbjct: 121 KRLCLITNAQCPIKEPYEGTKEEQVTIIAKQLTAHGMKMESIIFRGKLGQDANREIMDEN 180
Query: 172 DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTG 231
D+LLNIFSK++S + L++++ SL GA +TR+I+ VT FRGDLE+S K+ IKV VYKKT
Sbjct: 181 DHLLNIFSKETSTRLLYLENPISLFGALRTRNITLVTTFRGDLEISPKLSIKVMVYKKTA 240
Query: 232 EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 291
EEKFPTLKKYSDKAP+ ++AT E+K+DYEYKS ED KV+ P+QRIKGY YGPQ+VPIS
Sbjct: 241 EEKFPTLKKYSDKAPTNAQYATRELKIDYEYKSSEDRDKVLSPDQRIKGYPYGPQIVPIS 300
Query: 292 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKE 351
+EW+AVKF+PEK VKLLGFTD+SNI RH+YMKDV +F+ +PGN+ A +A+SALARAMKE
Sbjct: 301 RSEWDAVKFQPEKGVKLLGFTDSSNIFRHHYMKDVYVFLPQPGNTGAMLALSALARAMKE 360
Query: 352 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFP 411
M+KVAI+RCVWR+GQ +V +GVLTPN+S+K NIPDSFY NVLPFAEDVREFQFPSFS FP
Sbjct: 361 MDKVAILRCVWRKGQSNVSIGVLTPNLSDKENIPDSFYLNVLPFAEDVREFQFPSFSNFP 420
Query: 412 VSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPP 471
SW+PN QQ EAA NL+K LDLAP G+ E+L P+ T NP LERFY LELKS+ D A P
Sbjct: 421 ASWKPNGQQLEAAANLIKTLDLAPHGQAEVLLPDFTSNPVLERFYRFLELKSKDPDVAVP 480
Query: 472 PLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGD 531
P+DD+LKKITEPD LL +++S ID+FC F +K P LKKS RR K S +++ +
Sbjct: 481 PIDDTLKKITEPDADLLLQNKSVIDSFCRSFELKGQP-LKKS-RRLWEGKRSSTNDIIEN 538
Query: 532 GSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLL 591
SV V+KIGDLTP QDFEA++SRRD PDWV KAI +MKNKIF L+
Sbjct: 539 ASVK---------------VEKIGDLTPAQDFEALISRRDSPDWVVKAINEMKNKIFDLV 583
Query: 592 ENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKKL 651
E+S+EG NYPKA E LV LRKGCILEQEPKQFND L+ +C CR+ +F +L SK L
Sbjct: 584 EDSHEGDNYPKAFECLVVLRKGCILEQEPKQFNDFLKHICNFCRENRLHSFCQYLASKDL 643
Query: 652 SLISKSEAVDSDITDDEAGSFIVKSQPKHE 681
+LISK+EAVDSD+TD+EA SF+V+S+PK E
Sbjct: 644 TLISKTEAVDSDVTDEEARSFLVESEPKVE 673
>gi|18402015|ref|NP_564520.1| ATP-dependent DNA helicase 2 subunit KU80 [Arabidopsis thaliana]
gi|75172082|sp|Q9FQ09.1|KU80_ARATH RecName: Full=ATP-dependent DNA helicase 2 subunit KU80; AltName:
Full=ATP-dependent DNA helicase 2 subunit 2; AltName:
Full=ATP-dependent DNA helicase II 80 kDa subunit
gi|12006422|gb|AAG44851.1|AF283758_1 Ku80-like protein [Arabidopsis thaliana]
gi|332194121|gb|AEE32242.1| ATP-dependent DNA helicase 2 subunit KU80 [Arabidopsis thaliana]
Length = 680
Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/687 (60%), Positives = 529/687 (77%), Gaps = 22/687 (3%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR RE L+L+LDV P+M SVLPDVEK CS L+QKKLIY K EVG+++FGTEET NEL
Sbjct: 1 MARNREGLVLVLDVGPAMRSVLPDVEKACSMLLQKKLIYNKYDEVGIVVFGTEETGNELA 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDY---------MLIKKYGETYKGK 111
+E+GGYE+V VL++I+VVD + +K LP+GT AGD+ MLIK YG +KGK
Sbjct: 61 REIGGYENVTVLRNIRVVDELAAEHVKQLPRGTVAGDFLDALIVGMDMLIKMYGNAHKGK 120
Query: 112 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN 171
K +CLIT+A CP KDP GTK+DQVSTIA +M A G++M++IV+R++LSG+ H RVI EN
Sbjct: 121 KRMCLITNAACPTKDPFEGTKDDQVSTIAMKMAAEGIKMESIVMRSNLSGDAHERVIEEN 180
Query: 172 DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTG 231
D+LL +FS + AKT+ VDS SL G+ KTR ++PVT+FRGDLE++ MKIKVWVYKK
Sbjct: 181 DHLLTLFSSNAIAKTVNVDSPLSLLGSLKTRRVAPVTLFRGDLEINPTMKIKVWVYKKVA 240
Query: 232 EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 291
EE+ PTLK YSDKAP TDKFA HEVKVDY+YK + ++V+ PE+RIKG+RYGPQV+PIS
Sbjct: 241 EERLPTLKMYSDKAPPTDKFAKHEVKVDYDYKVTAESTEVIAPEERIKGFRYGPQVIPIS 300
Query: 292 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKE 351
+ E +KFK +K +KLLGFT+ASNILRHYYMKDVN+ + +P ++ +AVSA+AR MKE
Sbjct: 301 PDQIETLKFKTDKGMKLLGFTEASNILRHYYMKDVNIVVPDPSKEKSVLAVSAIAREMKE 360
Query: 352 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFP 411
NKVAIVRCVWR GQ +VVVGVLTPNVSE+ + PDSFYFNVLPFAEDVREF FPSF+K P
Sbjct: 361 TNKVAIVRCVWRNGQGNVVVGVLTPNVSERDDTPDSFYFNVLPFAEDVREFPFPSFNKLP 420
Query: 412 VSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPP 471
SW+P+EQQQ ADNLVKMLDLAPS + E+L+P+LTPNP L+RFY +LELKS+ DA P
Sbjct: 421 SSWKPDEQQQAVADNLVKMLDLAPSAEEEVLKPDLTPNPVLQRFYEYLELKSKSTDATLP 480
Query: 472 PLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGD 531
P+D + K++ E DP L + ++S +D F G F +KENPKLKK+++R LR+KPSGSD+ +
Sbjct: 481 PMDGTFKRLMEQDPELSSNNKSIMDTFRGSFEVKENPKLKKASKRLLRDKPSGSDDEDNR 540
Query: 532 GSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLL 591
DA+ E+K +D +GD PIQDFEAM+SRRD DW +KAI MKN I L+
Sbjct: 541 MITYDAK-----ENK----IDIVGDANPIQDFEAMISRRDKTDWTEKAITQMKNLIMKLV 591
Query: 592 EN-SNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKK 650
EN ++EG KA+E ++ALRKGC+LEQEPKQFN+ L + K+C++RN S + MSKK
Sbjct: 592 ENCTDEG---DKALECVLALRKGCVLEQEPKQFNEFLNHLFKLCQERNLSHLLEHFMSKK 648
Query: 651 LSLISKSEAVDSDITDDEAGSFIVKSQ 677
++LI KSEA DSDI D+ AG FIVK +
Sbjct: 649 ITLIPKSEAADSDIVDENAGDFIVKQE 675
>gi|297847048|ref|XP_002891405.1| hypothetical protein ARALYDRAFT_891612 [Arabidopsis lyrata subsp.
lyrata]
gi|297337247|gb|EFH67664.1| hypothetical protein ARALYDRAFT_891612 [Arabidopsis lyrata subsp.
lyrata]
Length = 680
Score = 842 bits (2174), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/691 (59%), Positives = 528/691 (76%), Gaps = 22/691 (3%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR RE L+L+LDV P+MHSVLPDVEK CS L+QKKLIY K EVG+++FGTEET NEL
Sbjct: 1 MARNREGLVLVLDVGPAMHSVLPDVEKACSMLLQKKLIYNKYDEVGIVVFGTEETGNELA 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDY---------MLIKKYGETYKGK 111
+E+GGYE+V VL++I+VVD + + +K LP+GT AGD+ MLIK YG KGK
Sbjct: 61 REIGGYENVTVLRNIRVVDEVVAEHVKQLPRGTVAGDFLDALIVGMDMLIKMYGNAQKGK 120
Query: 112 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN 171
K LCLIT+A CP KDP GTK+DQVSTIA +M A G++M++IV+R++LSG+ H RVI EN
Sbjct: 121 KRLCLITNAACPTKDPFEGTKDDQVSTIAMKMAAEGIKMESIVMRSNLSGDAHERVIEEN 180
Query: 172 DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTG 231
D+LLN+FS + AKT+ V+S SL G+ KTR ++PVT+FRGDLE++ MKIKVWVYKK
Sbjct: 181 DHLLNLFSSNAIAKTVNVESPLSLLGSLKTRRVAPVTLFRGDLEINPTMKIKVWVYKKVA 240
Query: 232 EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 291
EE+ PTLK YSDKAP TDKFA HEVK+DY+YK + ++V+ PE+RIKG+RYG QV+PIS
Sbjct: 241 EERLPTLKMYSDKAPPTDKFAKHEVKIDYDYKVTAESTEVIAPEERIKGFRYGRQVIPIS 300
Query: 292 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKE 351
+ E +KFK +K +KLLGFT+ASNILRHYYMKDVN+ + +P ++ +AVSA+AR MK+
Sbjct: 301 PDQIETLKFKTDKGMKLLGFTEASNILRHYYMKDVNIVVPDPSKEKSVLAVSAIAREMKQ 360
Query: 352 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFP 411
N VAIVRCVWR GQ + VVGVLTPNVSE+ + PDSFYFNVLPFAEDVREF FPSF+K P
Sbjct: 361 TNMVAIVRCVWRNGQGNAVVGVLTPNVSERDDTPDSFYFNVLPFAEDVREFPFPSFNKLP 420
Query: 412 VSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPP 471
SW+P+EQQQ ADNLVKMLDLAPS K E+L+P+LTPNP L+RFY +LELKS+ D+A P
Sbjct: 421 SSWKPDEQQQAVADNLVKMLDLAPSAKEEVLKPDLTPNPVLQRFYEYLELKSKSTDSALP 480
Query: 472 PLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGD 531
P+D++ K++ E DP L++ ++S +D+F G F +KENPKLKK+++R LR+KPSGSD+ +
Sbjct: 481 PMDETFKRLIEQDPELISNNKSIMDSFRGSFEVKENPKLKKASKRLLRDKPSGSDDEDNR 540
Query: 532 GSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLL 591
+ E K +D +GD PIQDFEAM+SRRD DW +KAI MKN I L+
Sbjct: 541 MITYEPN-----EKK----IDVVGDANPIQDFEAMISRRDKTDWTEKAITQMKNLIMKLV 591
Query: 592 EN-SNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKK 650
EN ++EG KA+E ++ALRKGC+LEQEPKQFN+ L + K+C++R S + SKK
Sbjct: 592 ENCTDEG---DKALECVLALRKGCVLEQEPKQFNEFLNHLFKVCQERKLSHLLEHFTSKK 648
Query: 651 LSLISKSEAVDSDITDDEAGSFIVKSQPKHE 681
++LI KSEA DSD+ D+ +G F VK +P E
Sbjct: 649 ITLIPKSEAADSDVVDENSGDFTVKQEPMIE 679
>gi|296089148|emb|CBI38851.3| unnamed protein product [Vitis vinifera]
Length = 690
Score = 835 bits (2156), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/662 (62%), Positives = 524/662 (79%), Gaps = 20/662 (3%)
Query: 29 CSRLIQKKLIYGKNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKH 88
C R + LIY K VG++LFGT+ T+NELTK+VGGY++V V QDIKVVDG LV++++
Sbjct: 34 CRR---RHLIYNKKDLVGIVLFGTKVTKNELTKKVGGYKYVLVSQDIKVVDGDLVEAVRE 90
Query: 89 LPQGTCAGDY---------MLIKKYGETYKGK--KHLCLITDALCPLKDPDVGTKEDQVS 137
LP+GT AGD+ MLIKK+ T +GK K LCLIT ALCP K P G KED++
Sbjct: 91 LPRGTFAGDFLDAIVVGMDMLIKKFLLTKRGKIKKRLCLITSALCPTKGPYKGAKEDEIG 150
Query: 138 TIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRG 197
TIA QM A G+R++ IV R LSG +MR++ END LL +FSKK+ AKT++V+S TSL G
Sbjct: 151 TIAEQMTAHGIRLECIVARGRLSGNMNMRIMEENDLLLKLFSKKTIAKTVYVESPTSLLG 210
Query: 198 ARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVK 257
A +TR+++PVTIFRGDLELS KM+IKVWVYKK+ EE P LK YSD+AP TDKFATHEV+
Sbjct: 211 ALRTRNVAPVTIFRGDLELSPKMEIKVWVYKKSAEE-LPVLKLYSDEAPPTDKFATHEVR 269
Query: 258 VDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI 317
V+ +YKSVEDP+KVVP QRI+GY YGPQVVPISSAEWEAVKF+PEK VKLLGFTDASNI
Sbjct: 270 VNLQYKSVEDPTKVVPLTQRIQGYSYGPQVVPISSAEWEAVKFEPEKGVKLLGFTDASNI 329
Query: 318 LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPN 377
+RHYY KDVN+FIAEPGN++A +AVSALARAMKEMNKVAI+RCVWR+ Q++V++G+LTPN
Sbjct: 330 MRHYYKKDVNIFIAEPGNTKAILAVSALARAMKEMNKVAILRCVWRRKQRNVIIGILTPN 389
Query: 378 VSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSG 437
VSEK ++PDSFYFNVLP+AEDV+EFQFPSFS P+SWQPNE+QQEAAD+LV+ML LAP G
Sbjct: 390 VSEKDSVPDSFYFNVLPYAEDVQEFQFPSFSNLPLSWQPNEEQQEAADDLVQMLYLAPFG 449
Query: 438 KGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDA 497
+ E L P++TPNP LERFY +LELKS+ AA PP+D +LK ITEPDP LLA+++S ID
Sbjct: 450 REESLLPDVTPNPVLERFYRYLELKSKKPYAAVPPVDKTLKTITEPDPKLLAQNKSIIDE 509
Query: 498 FCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNSMESKPVVT-VDKIGD 556
F +F +K+NPKLKKST R++ SG E G SDA A+NS+E+ V+T V KIGD
Sbjct: 510 FKRRFELKQNPKLKKST----RDRQSGVKEEANIGESSDAGAINSVENTSVITMVKKIGD 565
Query: 557 LTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCIL 616
TPIQDFEAMMS R+ P+WV KAI++MKNKIF L++NSNE N+ KA++ LVA RKGCIL
Sbjct: 566 STPIQDFEAMMSHRESPEWVGKAIKEMKNKIFDLVQNSNERDNHLKALDCLVAFRKGCIL 625
Query: 617 EQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKKLSLISKSEAVDSDITDDEAGSFIVKS 676
EQ+P +FN+ L + K C+ N ++F + L S ++ LI K+E DS++T+D A +F+VK
Sbjct: 626 EQKPTEFNNFLLHIYKFCKYHNLNSFCESLASNEIMLIPKTEVTDSEVTEDGARNFMVKK 685
Query: 677 QP 678
+P
Sbjct: 686 EP 687
>gi|12323098|gb|AAG51535.1|AC051631_15 hypothetical protein; 39910-36975 [Arabidopsis thaliana]
Length = 663
Score = 830 bits (2144), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/670 (60%), Positives = 515/670 (76%), Gaps = 22/670 (3%)
Query: 18 MHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKV 77
M SVLPDVEK CS L+QKKLIY K EVG+++FGTEET NEL +E+GGYE+V VL++I+V
Sbjct: 1 MRSVLPDVEKACSMLLQKKLIYNKYDEVGIVVFGTEETGNELAREIGGYENVTVLRNIRV 60
Query: 78 VDGHLVQSLKHLPQGTCAGDY---------MLIKKYGETYKGKKHLCLITDALCPLKDPD 128
VD + +K LP+GT AGD+ MLIK YG +KGKK +CLIT+A CP KDP
Sbjct: 61 VDELAAEHVKQLPRGTVAGDFLDALIVGMDMLIKMYGNAHKGKKRMCLITNAACPTKDPF 120
Query: 129 VGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLF 188
GTK+DQVSTIA +M A G++M++IV+R++LSG+ H RVI END+LL +FS + AKT+
Sbjct: 121 EGTKDDQVSTIAMKMAAEGIKMESIVMRSNLSGDAHERVIEENDHLLTLFSSNAIAKTVN 180
Query: 189 VDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPST 248
VDS SL G+ KTR ++PVT+FRGDLE++ MKIKVWVYKK EE+ PTLK YSDKAP T
Sbjct: 181 VDSPLSLLGSLKTRRVAPVTLFRGDLEINPTMKIKVWVYKKVAEERLPTLKMYSDKAPPT 240
Query: 249 DKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKL 308
DKFA HEVKVDY+YK + ++V+ PE+RIKG+RYGPQV+PIS + E +KFK +K +KL
Sbjct: 241 DKFAKHEVKVDYDYKVTAESTEVIAPEERIKGFRYGPQVIPISPDQIETLKFKTDKGMKL 300
Query: 309 LGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQS 368
LGFT+ASNILRHYYMKDVN+ + +P ++ +AVSA+AR MKE NKVAIVRCVWR GQ +
Sbjct: 301 LGFTEASNILRHYYMKDVNIVVPDPSKEKSVLAVSAIAREMKETNKVAIVRCVWRNGQGN 360
Query: 369 VVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV 428
VVVGVLTPNVSE+ + PDSFYFNVLPFAEDVREF FPSF+K P SW+P+EQQQ ADNLV
Sbjct: 361 VVVGVLTPNVSERDDTPDSFYFNVLPFAEDVREFPFPSFNKLPSSWKPDEQQQAVADNLV 420
Query: 429 KMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLL 488
KMLDLAPS + E+L+P+LTPNP L+RFY +LELKS+ DA PP+D + K++ E DP L
Sbjct: 421 KMLDLAPSAEEEVLKPDLTPNPVLQRFYEYLELKSKSTDATLPPMDGTFKRLMEQDPELS 480
Query: 489 AESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNSMESKPV 548
+ ++S +D F G F +KENPKLKK+++R LR+KPSGSD+ + DA+ E+K
Sbjct: 481 SNNKSIMDTFRGSFEVKENPKLKKASKRLLRDKPSGSDDEDNRMITYDAK-----ENK-- 533
Query: 549 VTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLEN-SNEGINYPKAVELL 607
+D +GD PIQDFEAM+SRRD DW +KAI MKN I L+EN ++EG KA+E +
Sbjct: 534 --IDIVGDANPIQDFEAMISRRDKTDWTEKAITQMKNLIMKLVENCTDEG---DKALECV 588
Query: 608 VALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKKLSLISKSEAVDSDITDD 667
+ALRKGC+LEQEPKQFN+ L + K+C++RN S + MSKK++LI KSEA DSDI D+
Sbjct: 589 LALRKGCVLEQEPKQFNEFLNHLFKLCQERNLSHLLEHFMSKKITLIPKSEAADSDIVDE 648
Query: 668 EAGSFIVKSQ 677
AG FIVK +
Sbjct: 649 NAGDFIVKQE 658
>gi|8778524|gb|AAF79532.1|AC023673_20 F21D18.26 [Arabidopsis thaliana]
Length = 707
Score = 801 bits (2068), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/714 (56%), Positives = 514/714 (71%), Gaps = 66/714 (9%)
Query: 18 MHSVLPDVEKLCSRLIQKK--------------------------LIYGKNHEVGVILFG 51
M SVLPDVEK CS L+QKK LIY K EVG+++FG
Sbjct: 1 MRSVLPDVEKACSMLLQKKVYDLFLLKLLFMNFGSFLIGFGLLLQLIYNKYDEVGIVVFG 60
Query: 52 TEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDY------------- 98
TEET NEL +E+GGYE+V VL++I+VVD + +K LP+GT AGD
Sbjct: 61 TEETGNELAREIGGYENVTVLRNIRVVDELAAEHVKQLPRGTVAGDCILLAILDALIVGM 120
Query: 99 -MLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRA 157
MLIK YG +KGKK +CLIT+A CP KDP GTK+DQVSTIA +M A G++M++IV+R+
Sbjct: 121 DMLIKMYGNAHKGKKRMCLITNAACPTKDPFEGTKDDQVSTIAMKMAAEGIKMESIVMRS 180
Query: 158 SLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELS 217
+LSG+ H RVI END+LL +FS + AKT+ VDS SL G+ KTR ++PVT+FRGDLE++
Sbjct: 181 NLSGDAHERVIEENDHLLTLFSSNAIAKTVNVDSPLSLLGSLKTRRVAPVTLFRGDLEIN 240
Query: 218 EKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQR 277
MKIKVWVYKK EE+ PTLK YSDKAP TDKFA HEVKVDY+YK + ++V+ PE+R
Sbjct: 241 PTMKIKVWVYKKVAEERLPTLKMYSDKAPPTDKFAKHEVKVDYDYKVTAESTEVIAPEER 300
Query: 278 IKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSR 337
IKG+RYGPQV+PIS + E +KFK +K +KLLGFT+ASNILRHYYMKDVN+ + +P +
Sbjct: 301 IKGFRYGPQVIPISPDQIETLKFKTDKGMKLLGFTEASNILRHYYMKDVNIVVPDPSKEK 360
Query: 338 ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAE 397
+ +AVSA+AR MKE NKVAIVRCVWR GQ +VVVGVLTPNVSE+ + PDSFYFNVLPFAE
Sbjct: 361 SVLAVSAIAREMKETNKVAIVRCVWRNGQGNVVVGVLTPNVSERDDTPDSFYFNVLPFAE 420
Query: 398 DVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPAL----- 452
DVREF FPSF+K P SW+P+EQQQ ADNLVKMLDLAPS + E+L+P+LTPNP L
Sbjct: 421 DVREFPFPSFNKLPSSWKPDEQQQAVADNLVKMLDLAPSAEEEVLKPDLTPNPVLQVICQ 480
Query: 453 --------ERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVI 504
+RFY +LELKS+ DA PP+D + K++ E DP L + ++S +D F G F +
Sbjct: 481 LILMKYFYQRFYEYLELKSKSTDATLPPMDGTFKRLMEQDPELSSNNKSIMDTFRGSFEV 540
Query: 505 KENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFE 564
KENPKLKK+++R LR+KPSGSD+ + DA+ E+K +D +GD PIQDFE
Sbjct: 541 KENPKLKKASKRLLRDKPSGSDDEDNRMITYDAK-----ENK----IDIVGDANPIQDFE 591
Query: 565 AMMSRRDCPDWVDKAIEDMKNKIFGLLEN-SNEGINYPKAVELLVALRKGCILEQEPKQF 623
AM+SRRD DW +KAI MKN I L+EN ++EG KA+E ++ALRKGC+LEQEPKQF
Sbjct: 592 AMISRRDKTDWTEKAITQMKNLIMKLVENCTDEG---DKALECVLALRKGCVLEQEPKQF 648
Query: 624 NDVLEKVCKICRKRNFSTFFDFLMSKKLSLISKSEAVDSDITDDEAGSFIVKSQ 677
N+ L + K+C++RN S + MSKK++LI KSEA DSDI D+ AG FIVK +
Sbjct: 649 NEFLNHLFKLCQERNLSHLLEHFMSKKITLIPKSEAADSDIVDENAGDFIVKQE 702
>gi|75226365|sp|Q75IP6.1|KU80_ORYSJ RecName: Full=ATP-dependent DNA helicase 2 subunit KU80; AltName:
Full=ATP-dependent DNA helicase 2 subunit 2; AltName:
Full=ATP-dependent DNA helicase II 80 kDa subunit
gi|41393254|gb|AAS01977.1| putative H-box binding protein, KAP2, with alternative splicing
isoforms [Oryza sativa Japonica Group]
gi|108712190|gb|ABF99985.1| KAP-2, putative, expressed [Oryza sativa Japonica Group]
Length = 688
Score = 770 bits (1989), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/692 (58%), Positives = 499/692 (72%), Gaps = 15/692 (2%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR +EAL+LLLDV PSMH VL +VE +CS L+ KKL+Y ++ E+GV+LFGT+ET NEL
Sbjct: 1 MARNKEALVLLLDVGPSMHGVLQEVENICSTLVHKKLVYNRSDEIGVVLFGTKETSNELA 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDY---------MLIKKYGETYKGK 111
KE+GGY+HV V +DIKVVD +L++LP+GT GD+ MLI+K+G KGK
Sbjct: 61 KELGGYKHVVVARDIKVVDEETTNALQNLPRGTSPGDFLDAIVVGLDMLIRKFG-NIKGK 119
Query: 112 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN 171
+ +CL+TDA PL+DP GTK+DQV TIA QM ++M I+ R S G H V+ EN
Sbjct: 120 QRMCLVTDAQHPLRDPPQGTKKDQVDTIADQMKRHEIKMDCIIFRES--GVRHNAVMDEN 177
Query: 172 DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTG 231
D LL F ++S K + VDS TSL GA +TR++ PVT+FRGDLE+S KIKVWVYKKT
Sbjct: 178 DQLLYHFRERSVTKVVHVDSPTSLLGALRTRNVLPVTVFRGDLEVSSSFKIKVWVYKKTS 237
Query: 232 EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 291
EEKFPTLKKYSDKAP++DKFA+HEVKVDYEYKSV +P VVPP+QRIKGY YGPQVVPIS
Sbjct: 238 EEKFPTLKKYSDKAPASDKFASHEVKVDYEYKSVLEPDTVVPPDQRIKGYLYGPQVVPIS 297
Query: 292 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKE 351
SAEWEAVKFKPEK VKLLGFTD S+I RHY+MKDV F+ EPGN++A AVSALARAM E
Sbjct: 298 SAEWEAVKFKPEKGVKLLGFTDRSSISRHYFMKDVFSFVPEPGNTKAVAAVSALARAMSE 357
Query: 352 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFP 411
MNKVAI+RCVWRQGQ +V +GVLTPN+S N+ DSFYFN+LPFAED+REFQF SFS P
Sbjct: 358 MNKVAILRCVWRQGQGNVALGVLTPNISSAKNVLDSFYFNILPFAEDIREFQFRSFSSLP 417
Query: 412 VSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPP 471
S QP ++QQEAADNLVKMLDLAP G+ EIL+P+ TPNP LERFY +L+LKS+ DA P
Sbjct: 418 SSSQPTKEQQEAADNLVKMLDLAPPGREEILKPDFTPNPMLERFYRYLDLKSKQPDANVP 477
Query: 472 PLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGD 531
PLD LKKITEPDP ++ I F +KENPK KK R R +G+D+
Sbjct: 478 PLDKCLKKITEPDPDVIDYQAPLIKKLGNVFELKENPK-KKKARTQDRLTYTGADDQAKL 536
Query: 532 GSVSDAQAVNSMES--KPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFG 589
A+ V E+ P +IGD P+QDFEAM+++R WV AIE+M+ I
Sbjct: 537 LEEPSAEKVGVSEALYPPKKKAGEIGDHNPVQDFEAMLTQRSSSTWVQTAIEEMQKYITA 596
Query: 590 LLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSK 649
L+++S + N+ KA+E LVALRK CI+EQEP ++N + K+C+ R F L SK
Sbjct: 597 LIQDSCDRDNHQKALECLVALRKACIIEQEPNEYNGFVTKLCQKFRPAGDKIFLQLLSSK 656
Query: 650 KLSLISKSEAVDSDITDDEAGSFIVKSQPKHE 681
K SLISK EA DSD+T++ A +F +K +P +
Sbjct: 657 KASLISKEEAPDSDVTEEMARNFCLKPEPSSQ 688
>gi|357116037|ref|XP_003559791.1| PREDICTED: ATP-dependent DNA helicase 2 subunit KU80-like isoform 1
[Brachypodium distachyon]
Length = 689
Score = 759 bits (1961), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/689 (57%), Positives = 496/689 (71%), Gaps = 16/689 (2%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR +E L+LLLDV PSMH L +VE +CS L++KKL+Y ++ EVG++LFGT+ET N+L
Sbjct: 1 MARNKEGLVLLLDVGPSMHGALQEVENVCSTLLRKKLVYNRSDEVGIVLFGTKETCNDLA 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDY---------MLIKKYGETYKGK 111
KE+GGY+HV V DIKVV+ +L++LP+GT GD+ MLIK++G T KGK
Sbjct: 61 KEIGGYKHVVVKHDIKVVEEGTKDALQNLPRGTAPGDFLDAIVVGLDMLIKRFGNT-KGK 119
Query: 112 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN 171
LCLITD+ PL+DP GTKEDQV TIA QM ++M IV R S G H V+ EN
Sbjct: 120 HRLCLITDSQHPLRDPPEGTKEDQVDTIAEQMKKHDIKMDCIVFRES--GVQHNSVMDEN 177
Query: 172 DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTG 231
D LL F +S AK + VD+ TSL GA KTR + PVTIFRGDLE+S +KIKVWVYKKT
Sbjct: 178 DQLLYHFRDRSVAKVVQVDTPTSLLGALKTRIVLPVTIFRGDLEVSSNLKIKVWVYKKTS 237
Query: 232 EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 291
EEKFPTLKKYSD+AP +DKFA+HEVKVD+EYKS+ +P VVPP+QRIKGY YGPQVVPIS
Sbjct: 238 EEKFPTLKKYSDQAPPSDKFASHEVKVDFEYKSILEPDTVVPPDQRIKGYLYGPQVVPIS 297
Query: 292 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKE 351
SAEWEAVKFKPEK VKLLGF D S+I RHY+MKDVN F+ EPGN +ATVAVSA+ARAM+E
Sbjct: 298 SAEWEAVKFKPEKGVKLLGFADRSSIPRHYFMKDVNSFVPEPGNKKATVAVSAIARAMQE 357
Query: 352 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFP 411
MNKVAI+RCVWRQGQ +V GVLTPN+S N+PDSF+FN+LPF+ED+REFQF SFS P
Sbjct: 358 MNKVAILRCVWRQGQGNVAFGVLTPNISSVNNVPDSFFFNILPFSEDIREFQFRSFSSLP 417
Query: 412 VSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPP 471
S QP E+QQEAAD+LVKMLDLAP G+ EIL+P+ TPNP LERFY L+LKS+ DA P
Sbjct: 418 SSSQPTEEQQEAADSLVKMLDLAPPGREEILRPDFTPNPMLERFYSFLDLKSKEPDANAP 477
Query: 472 PLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEP--N 529
PLD L++ITEPD ++ I F +K+NPK KK+ + + D+ +
Sbjct: 478 PLDKCLRRITEPDSDIIDYQAPLIQNLGKAFELKDNPKRKKARTQERLNYTAADDQTKKS 537
Query: 530 GDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFG 589
D A+A+ + V KIGDL P+QDFEAM++ R WV KAIE+M+
Sbjct: 538 ADPYAEKAKAIEVLYPS-AEKVGKIGDLNPVQDFEAMLTERSSSIWVQKAIEEMQKYTTV 596
Query: 590 LLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRK-RNFSTFFDFLMS 648
L+ENS +G Y KA+E +VALRK CI+EQEP +FN L K+ K + + + FF L S
Sbjct: 597 LIENSPQGDYYQKALECIVALRKACIIEQEPNEFNQFLTKLYKRLKNVDDVAKFFQLLSS 656
Query: 649 KKLSLISKSEAVDSDITDDEAGSFIVKSQ 677
K +SLISK EA DSD+T++ A SF +K +
Sbjct: 657 KNVSLISKEEAPDSDVTEEMARSFYLKPE 685
>gi|347357753|gb|AEO86624.1| Ku80 [Hordeum vulgare subsp. vulgare]
Length = 701
Score = 758 bits (1956), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/700 (55%), Positives = 496/700 (70%), Gaps = 26/700 (3%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR +E L+LLLDV PSMH L ++E +C+ L++KKL++ ++ EVGV+LFGT+ET N+L
Sbjct: 1 MARNKEGLVLLLDVGPSMHRALQEIENVCTTLVRKKLVFHRSDEVGVVLFGTKETHNDLA 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDY---------MLIKKYGETYKGK 111
+E+GGY+HV V DIKVVD +L++LP+GT GD+ MLIK++G+T K K
Sbjct: 61 RELGGYKHVLVKHDIKVVDEETKDALENLPRGTAPGDFLDAIVVGLDMLIKRFGDT-KAK 119
Query: 112 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN 171
+ LCLITDA L+DP GTKEDQV TIA QM +M IV R + G H VI EN
Sbjct: 120 QRLCLITDAQHLLRDPPQGTKEDQVDTIADQMKRRATKMGCIVFREA--GVQHNSVICEN 177
Query: 172 DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTG 231
D LL F +S AK + VD+ T+L GA KTR++ PVTIFRGDLE++ KIKVW YKKT
Sbjct: 178 DRLLYHFRDRSVAKVVQVDTPTALLGALKTRNVLPVTIFRGDLEVNSTFKIKVWAYKKTS 237
Query: 232 EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 291
EEKFPTLKKYSDKAP +D+FA+HEVKVDYEYKS+ +P VVPP+QRIKGY YGPQVVPIS
Sbjct: 238 EEKFPTLKKYSDKAPPSDQFASHEVKVDYEYKSILEPDTVVPPDQRIKGYLYGPQVVPIS 297
Query: 292 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKE 351
SAEWEAVKFKPEK VKLLGF D S++ R Y+MKDVN F+ EPGN++A VAVSALARAM++
Sbjct: 298 SAEWEAVKFKPEKGVKLLGFADRSSVPRSYFMKDVNSFVPEPGNTKAIVAVSALARAMQD 357
Query: 352 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFP 411
MNKVAI+RCVWRQ Q +V GVLTPN+S N+PDSFYFN+LPFAEDVR+F F SFS P
Sbjct: 358 MNKVAILRCVWRQNQANVAFGVLTPNISSVNNVPDSFYFNILPFAEDVRDFPFRSFSSLP 417
Query: 412 VSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPP 471
S QP E+QQEAADNLVKMLDLAP G+ EIL+P+ TPNP LERFY +L+LKS+ DA PP
Sbjct: 418 PSSQPTEEQQEAADNLVKMLDLAPPGREEILRPDFTPNPMLERFYSYLDLKSKQPDANPP 477
Query: 472 PLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKK--STRRFLREKPSG----S 525
PL L++ITEPDP ++ I F +KENPK KK + R P S
Sbjct: 478 PLHSCLRRITEPDPDVINYRAPLIQNLGKAFDLKENPKRKKARTQERLAYAGPDDQAKKS 537
Query: 526 DEPNGDGSVSDAQAVNSMESKPVVT-------VDKIGDLTPIQDFEAMMSRRDCPDWVDK 578
++ G D QA ++ +++ + V KIGD+ P++DFEAM++ R WV K
Sbjct: 538 EDDAGKAMAIDDQAKDAEKARAIEVLFPSTEKVGKIGDVNPVKDFEAMLAERSSSTWVQK 597
Query: 579 AIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRK-R 637
A+E+MK L+ENS +G Y KA+E VALRK CI+EQEP+++N + K+ + +K
Sbjct: 598 AMEEMKKYTTALIENSPQGDYYEKALECFVALRKACIIEQEPEEYNQFVTKLYERLKKVD 657
Query: 638 NFSTFFDFLMSKKLSLISKSEAVDSDITDDEAGSFIVKSQ 677
+ FF L SK + LI K EA DSD+T++ A SF +K++
Sbjct: 658 DVVKFFQLLSSKNVLLICKEEAPDSDVTEEMARSFFLKTE 697
>gi|326500760|dbj|BAJ95046.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 701
Score = 757 bits (1955), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/700 (55%), Positives = 497/700 (71%), Gaps = 26/700 (3%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR +E L+LLLDV PSMH L ++E +C+ L++KKL++ ++ EVGV+LFGT+ET N+L
Sbjct: 1 MARNKEGLVLLLDVGPSMHRALQEIENVCTTLVRKKLVFHRSDEVGVVLFGTKETHNDLA 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDY---------MLIKKYGETYKGK 111
+E+GGY+HV V DIKVVD +L++LP+GT GD+ MLIK++G+T K K
Sbjct: 61 RELGGYKHVLVKHDIKVVDEETKDALENLPRGTAPGDFLDAIVVGLDMLIKRFGDT-KAK 119
Query: 112 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN 171
+ LCLITDA L+DP GTKEDQV TIA QM ++M IV R + G H V+ EN
Sbjct: 120 QRLCLITDAQHLLRDPPQGTKEDQVDTIADQMKKHDIKMDCIVFREA--GVQHNSVMDEN 177
Query: 172 DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTG 231
D LL F +S AK + VD+ T+L GA KTR++ PVTIFRGDLE++ KIKVW YKKT
Sbjct: 178 DRLLYHFRDRSVAKVVQVDTPTALLGALKTRNVLPVTIFRGDLEVNSTFKIKVWAYKKTS 237
Query: 232 EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 291
EEKFPTLKKYSDKAP +D+FA+HEVKVDYEYKS+ +P VVPP+QRIKGY YGPQVVPIS
Sbjct: 238 EEKFPTLKKYSDKAPPSDQFASHEVKVDYEYKSILEPDTVVPPDQRIKGYLYGPQVVPIS 297
Query: 292 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKE 351
SAEWEAVKFKPEK VKLLGF D S++ R Y+MKDVN F+ EPGN++A VAVSALARAM++
Sbjct: 298 SAEWEAVKFKPEKGVKLLGFADRSSVPRSYFMKDVNSFVPEPGNTKAIVAVSALARAMQD 357
Query: 352 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFP 411
MNKVAI+RCVWRQ Q +V GVLTPN+S N+PDSFYFN+LPFAEDVR+F F SFS P
Sbjct: 358 MNKVAILRCVWRQNQANVAFGVLTPNISSVNNVPDSFYFNILPFAEDVRDFPFRSFSSLP 417
Query: 412 VSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPP 471
S QP E+QQEAADNLVKMLDLAP G+ EIL+P+ TPNP LERFY +L+LKS+ DA PP
Sbjct: 418 PSSQPTEEQQEAADNLVKMLDLAPPGREEILRPDFTPNPMLERFYSYLDLKSKQPDANPP 477
Query: 472 PLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKK--STRRFLREKPSG----S 525
PL L++ITEPDP ++ I F +KENPK KK + R P S
Sbjct: 478 PLHSCLRRITEPDPDVINYRAPLIQNLGKAFDLKENPKRKKARTQERLAYAGPDDQAKKS 537
Query: 526 DEPNGDGSVSDAQAVNSMESKPVVT-------VDKIGDLTPIQDFEAMMSRRDCPDWVDK 578
++ G D QA ++ +++ + V KIGD+ P++DFEAM++ R WV K
Sbjct: 538 EDDAGKAMAIDDQAKDAEKARAIEVLFPSTEKVGKIGDVNPVKDFEAMLAERSSSTWVQK 597
Query: 579 AIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRK-R 637
A+E+MK L+ENS +G Y KA+E VALRK CI+EQEP+++N + K+ + +K
Sbjct: 598 AMEEMKKYTTALIENSPQGDYYEKALECFVALRKACIIEQEPEEYNQFVTKLYERLKKVD 657
Query: 638 NFSTFFDFLMSKKLSLISKSEAVDSDITDDEAGSFIVKSQ 677
+ FF L SK + LI K EA DSD+T++ A SF +K++
Sbjct: 658 DVVKFFQLLSSKNVLLICKEEAPDSDVTEEMARSFFLKTE 697
>gi|414874016|tpg|DAA52573.1| TPA: KAP-2 [Zea mays]
Length = 681
Score = 757 bits (1955), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/686 (57%), Positives = 497/686 (72%), Gaps = 18/686 (2%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR RE ++LLLDV PSMH VL +V+ +C L+ KKL+Y ++ EVG++LFGT+ T NEL
Sbjct: 1 MARNREVVILLLDVGPSMHGVLLEVKNVCLTLVHKKLVYNRSDEVGIVLFGTKGTCNELA 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDY---------MLIKKYGETYKGK 111
K++GGY+HV V+ DIKVVD Q+L++LP G+ GD+ M+I+K+G T KGK
Sbjct: 61 KDIGGYKHVTVIHDIKVVDEGTAQALQNLPLGSAPGDFLDSIVVGLDMVIRKFGIT-KGK 119
Query: 112 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN 171
+ LCLIT A L+DP GTKEDQV TIA + ++M+ I+ R G H V+ EN
Sbjct: 120 RRLCLITGAQELLRDPPEGTKEDQVDTIANMLKKHNIKMECIIFREP--GVHHNDVMEEN 177
Query: 172 DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTG 231
D LL+ F +S AK + VD+ TSL GA KTR++ PVT+FRGDLE++ KIKVWVYKKT
Sbjct: 178 DRLLHQFRNRSVAKVVQVDNPTSLLGALKTRNVLPVTVFRGDLEVNSNFKIKVWVYKKTA 237
Query: 232 EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 291
EEKFPTLKKYSDKAP DKFA+HEVKVDYEYKSV +P KVVPP+QRIKGY YGPQV+P+S
Sbjct: 238 EEKFPTLKKYSDKAPPNDKFASHEVKVDYEYKSVVEPDKVVPPDQRIKGYLYGPQVIPVS 297
Query: 292 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKE 351
+AEWEAVKFKPEK VKLLGFTD S++ RH +MKDV LFI EPGN +A++AVSA+ARAM +
Sbjct: 298 NAEWEAVKFKPEKGVKLLGFTDRSSVPRHQFMKDVCLFIPEPGNMKASLAVSAIARAMHQ 357
Query: 352 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFP 411
MNKVAIVRCVWRQGQ +V +GVLTPN+S NI DSFYFNVLPFAED+REFQF SFS P
Sbjct: 358 MNKVAIVRCVWRQGQGNVAIGVLTPNISSVNNIQDSFYFNVLPFAEDIREFQFRSFSSLP 417
Query: 412 VSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPP 471
S QP E+QQEAADNLVKMLDLAP G+ E+L+PE TPNP LERFY +L+LKS+ DA P
Sbjct: 418 SSSQPTEEQQEAADNLVKMLDLAPPGR-EVLKPEFTPNPILERFYSYLDLKSKQPDANVP 476
Query: 472 PLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGD 531
PL+ SL++ITEPDP ++ + I FV+K+NPK KK+ + + D+
Sbjct: 477 PLERSLRRITEPDPDVVGQQTQLIQNLSKAFVLKDNPKKKKARTQDMLAYTGAGDQAK-- 534
Query: 532 GSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLL 591
SV D N+ S V I D P+QDFEAM+++R W KAI DM+N I LL
Sbjct: 535 -SVEDRVLENTHPSTENVVA--IRDSNPVQDFEAMLAKRSSSTWTQKAIGDMQNYIAALL 591
Query: 592 ENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKKL 651
+NS++G NY KA+E +LRK CI+EQEP++FN L K+ + ++ + + FF L SK +
Sbjct: 592 QNSSDGGNYQKALECFASLRKACIIEQEPQEFNQFLTKIYERLKEGDAAKFFQLLSSKNI 651
Query: 652 SLISKSEAVDSDITDDEAGSFIVKSQ 677
SLI+K EA DSD+T++ A SF +K +
Sbjct: 652 SLINKEEAPDSDVTEEMARSFYLKRE 677
>gi|308052434|gb|ADO00729.1| Ku80 [Triticum aestivum]
Length = 706
Score = 756 bits (1951), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/705 (55%), Positives = 492/705 (69%), Gaps = 31/705 (4%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR +E L+LLLDV PSMH LP+VE +C+ L++KKL++ ++ EVGV+LFG +ET N+L
Sbjct: 1 MARNKEGLVLLLDVGPSMHRALPEVENVCTTLVRKKLVFHRSDEVGVVLFGAKETHNDLA 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDY---------MLIKKYGETYKGK 111
+E+GGY+HV V DIKVVD +L++LP+GT GD+ MLIK++G+T K K
Sbjct: 61 RELGGYKHVLVKHDIKVVDEETKDALENLPRGTAPGDFLDAIVVGLDMLIKRFGDT-KAK 119
Query: 112 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN 171
+ LCLITDA L+DP GTKEDQV TIA QM ++M IV R S G H V+ EN
Sbjct: 120 QRLCLITDAQHLLRDPPQGTKEDQVDTIADQMKKHDIKMDCIVFRES--GVQHNSVMDEN 177
Query: 172 DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTG 231
D LL F +S AK + VD+ T+L GA KTR++ PVTIFRGDLE+S KIKVW YKKT
Sbjct: 178 DRLLYHFRDRSVAKVVQVDTPTALLGALKTRNVLPVTIFRGDLEVSSTFKIKVWAYKKTS 237
Query: 232 EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 291
EEKFPTLKKYSDKAP +D+FA+HEVKVDYEYKS+ +P V+PP+QRIKGY YGPQVVPIS
Sbjct: 238 EEKFPTLKKYSDKAPPSDQFASHEVKVDYEYKSILEPDTVIPPDQRIKGYLYGPQVVPIS 297
Query: 292 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKE 351
SAEWEAVKFKPEK VKLLGF D S+I R Y+MKDVN F+ EPGN++A VAVSALARAM+E
Sbjct: 298 SAEWEAVKFKPEKGVKLLGFADRSSIPRSYFMKDVNSFVPEPGNTKAMVAVSALARAMQE 357
Query: 352 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFP 411
MNKVAI+RCVWRQ Q +V GVLTPN+S N+PDSFYFN+LPFAED+R+F F SFS P
Sbjct: 358 MNKVAILRCVWRQNQANVAFGVLTPNISSVNNVPDSFYFNILPFAEDIRDFPFRSFSSLP 417
Query: 412 VSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPP 471
S QP E+QQEAADNLVKMLDLAP G+ EIL+P+ TPNP LERFY +L LKS+ DA PP
Sbjct: 418 PSSQPTEEQQEAADNLVKMLDLAPPGREEILRPDFTPNPMLERFYSYLGLKSKQPDANPP 477
Query: 472 PLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKS-TRRFLREKPSGSDEPNG 530
PLD L++ITEPDP ++ I F +KENPK KK+ T+ L +
Sbjct: 478 PLDSCLRRITEPDPDVINYRVPLIQNLGKSFELKENPKRKKARTQERLAYTDPDDQAKSS 537
Query: 531 DGSVSDAQAVNSMESKP-----------------VVTVDKIGDLTPIQDFEAMMSRRDCP 573
+ + A A + KP V KI D+ P++DFEAM++ R
Sbjct: 538 ENNAEKATAADGQAKKPEDPYAEKARAIEVMFPSTEKVGKIEDVNPVKDFEAMLAERSSS 597
Query: 574 DWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKI 633
WV KAIE+MK L+ENS +G Y KA++ VALRK CI+EQEP+++N + K+ +
Sbjct: 598 IWVQKAIEEMKKYTTNLVENSLQGDYYEKALKCFVALRKACIIEQEPEEYNQFVTKLYER 657
Query: 634 CRK-RNFSTFFDFLMSKKLSLISKSEAVDSDITDDEAGSFIVKSQ 677
+K + FF L SK + LI K EA DSD+T++ A SF +K++
Sbjct: 658 LKKVDDVVKFFQLLSSKNVLLICKEEAPDSDVTEEMARSFFLKTE 702
>gi|226495197|ref|NP_001147945.1| LOC100281554 [Zea mays]
gi|195614740|gb|ACG29200.1| KAP-2 [Zea mays]
Length = 681
Score = 755 bits (1950), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/686 (57%), Positives = 496/686 (72%), Gaps = 18/686 (2%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR RE ++LLLDV PSMH VL +V+ +C L+ KKL+Y ++ EVG++LFGT+ T NEL
Sbjct: 1 MARNREVVILLLDVGPSMHGVLLEVKNVCLTLVHKKLVYNRSDEVGIVLFGTKGTCNELA 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDY---------MLIKKYGETYKGK 111
K++GGY+HV V+ DIKVVD Q+L++LP G+ GD+ M+I+K+G T KGK
Sbjct: 61 KDIGGYKHVTVIHDIKVVDEGTAQALQNLPLGSAPGDFLDSIVVGLDMVIRKFGIT-KGK 119
Query: 112 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN 171
+ LCLIT A L+DP GTKEDQV TIA + ++M+ I+ R G H V+ EN
Sbjct: 120 RRLCLITSAQELLRDPPEGTKEDQVDTIADMLKKHNIKMECIIFREP--GVHHNDVMEEN 177
Query: 172 DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTG 231
D LL+ F +S AK + VD+ TSL GA KTR++ PVT+FRGDLE++ KIKVWVYKKT
Sbjct: 178 DRLLHQFRNRSVAKVVQVDNPTSLLGALKTRNVLPVTVFRGDLEVNSNFKIKVWVYKKTA 237
Query: 232 EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 291
EEKFPTLKKYSDKAP +DKFA+HEVKVDYEYKSV +P KVVPP+QRIKGY YGPQV+P+S
Sbjct: 238 EEKFPTLKKYSDKAPPSDKFASHEVKVDYEYKSVVEPDKVVPPDQRIKGYLYGPQVIPVS 297
Query: 292 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKE 351
+AEWEAVKFKPEK VKLLGFTD S++ RH +MKDV LFI EPGN +A++AVSA+ARAM +
Sbjct: 298 NAEWEAVKFKPEKGVKLLGFTDRSSVPRHQFMKDVCLFIPEPGNMKASLAVSAIARAMHQ 357
Query: 352 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFP 411
MNKVAIVRCVWRQGQ +V +GVLTPN+S I DSFYFNVLPFAED+REFQF SFS P
Sbjct: 358 MNKVAIVRCVWRQGQGNVAIGVLTPNISSVNTIQDSFYFNVLPFAEDIREFQFRSFSSLP 417
Query: 412 VSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPP 471
S QP E+QQEAADNLVKMLDLAP G+ E+L+PE TPNP LERFY +L+LKS+ DA P
Sbjct: 418 SSSQPTEEQQEAADNLVKMLDLAPPGR-EVLKPEFTPNPILERFYSYLDLKSKQPDANVP 476
Query: 472 PLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGD 531
PL+ SL++ITEPDP ++ + I FV+KENPK KK+ + L D+
Sbjct: 477 PLERSLRRITEPDPDVVGQQTQLIQNLSKAFVLKENPKKKKARTQELLAYTGAGDQAK-- 534
Query: 532 GSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLL 591
SV D N+ S V I D P+QDFEAM+++R W KAI DM+N I LL
Sbjct: 535 -SVEDRVLENTHPSTENVVA--IRDSNPVQDFEAMLAKRSSSTWTQKAIGDMQNYIAALL 591
Query: 592 ENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKKL 651
+NS++G NY KA+E +LRK CI+EQEP++FN L + + ++ + + FF L SK +
Sbjct: 592 QNSSDGGNYQKALECFASLRKACIIEQEPQEFNQFLTNIYERLKEGDAAKFFQLLSSKNI 651
Query: 652 SLISKSEAVDSDITDDEAGSFIVKSQ 677
SLI+K EA DSD+T++ A SF +K +
Sbjct: 652 SLINKEEAPDSDVTEEMARSFYLKRE 677
>gi|365768469|gb|AEW90637.1| KU80-like protein [Pinus sylvestris]
Length = 710
Score = 754 bits (1946), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/685 (54%), Positives = 497/685 (72%), Gaps = 11/685 (1%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR +E+L+LLLD+SPSMH+ L VE+ S L+++K+ + K+ EVG++LFG EE +N+L
Sbjct: 1 MARNKESLVLLLDISPSMHNHLHYVERAMSTLVRRKVYFSKSDEVGLVLFGAEEPDNDLQ 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDYM---------LIKKYGETYKGK 111
KEVGGYE+V V + IKVVD ++++L LP+G GD++ LIKK G+ KG
Sbjct: 61 KEVGGYENVVVFRPIKVVDEDILEALSRLPRGMAPGDFLDAIVVGMDLLIKKLGKGSKGN 120
Query: 112 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN 171
K LCLIT A +K+PD GTKEDQV IA QM G+++ +V R + G+ + EN
Sbjct: 121 KRLCLITGAQSFIKEPDEGTKEDQVDIIANQMKEHGMKLDVVVFRQRMPGQTKSELFSEN 180
Query: 172 DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTG 231
+LLN FS+++ A+ + V+S TSL GA K R+ISP TIFRGDLEL+ MKIKVWVYKKT
Sbjct: 181 LSLLNRFSRRTEAEVIVVESPTSLLGAVKVRNISPFTIFRGDLELTPIMKIKVWVYKKTY 240
Query: 232 EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 291
+E+ PTLKKYSDKAP D +AT EVK+D EYKS E+P K +PPEQRIKG+ YGPQVVPIS
Sbjct: 241 QERIPTLKKYSDKAPPNDPYATREVKMDIEYKSREEPDKTIPPEQRIKGFNYGPQVVPIS 300
Query: 292 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKE 351
AE E +KFKPEK VKLLGFTDAS+I RH YMKD ++ IAEPGN++A +AVSA+ARAM+E
Sbjct: 301 MAEQETLKFKPEKGVKLLGFTDASSIPRHSYMKDTSILIAEPGNTKAILAVSAVARAMEE 360
Query: 352 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFP 411
KVAI+RCVWR+ Q +V++GVLTPN+S K N DSFYFN++PF ED+REF F SF FP
Sbjct: 361 TKKVAILRCVWRERQANVILGVLTPNISNKSNAADSFYFNIIPFVEDIREFPFASFDSFP 420
Query: 412 VSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPP 471
S QPN QQEAADN V+MLDLAP G+ E L PELT NP LERFY L+ KS DA P
Sbjct: 421 ASQQPNIVQQEAADNFVQMLDLAPPGREEALLPELTLNPILERFYSFLDTKSRRSDADVP 480
Query: 472 PLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGD 531
P+DD++K I EPDP L+A+++ +D FC QF +K NPK ++++F R+KPS S+E G
Sbjct: 481 PVDDAVKSIIEPDPELIAKNE--LDRFCSQFQLKMNPKKDNASKKFWRDKPSLSEEAAGK 538
Query: 532 GSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLL 591
+ D Q S +S ++IG LTP+QDFEAM++RRD +WV KAI +MK I LL
Sbjct: 539 EAGDDVQDGISFDSLAARKTEQIGSLTPVQDFEAMLARRDSDEWVPKAIREMKKLITDLL 598
Query: 592 ENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKKL 651
++S +G Y KA++ LVALR GC+ ++EP +FN+ + ++ C+ + + F++ ++SK
Sbjct: 599 DSSYKGNTYHKAMDCLVALRNGCVQQEEPIEFNNFMRELGNNCQGKRLNDFWELIVSKNF 658
Query: 652 SLISKSEAVDSDITDDEAGSFIVKS 676
SLI+K+EA DSD+T++EA F+ K+
Sbjct: 659 SLINKNEAADSDVTEEEAKEFLAKA 683
>gi|357116039|ref|XP_003559792.1| PREDICTED: ATP-dependent DNA helicase 2 subunit KU80-like isoform 2
[Brachypodium distachyon]
Length = 677
Score = 737 bits (1902), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/689 (56%), Positives = 487/689 (70%), Gaps = 28/689 (4%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR +E L+LLLDV PSMH L ++L+Y ++ EVG++LFGT+ET N+L
Sbjct: 1 MARNKEGLVLLLDVGPSMHGAL------------QELVYNRSDEVGIVLFGTKETCNDLA 48
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDY---------MLIKKYGETYKGK 111
KE+GGY+HV V DIKVV+ +L++LP+GT GD+ MLIK++G T KGK
Sbjct: 49 KEIGGYKHVVVKHDIKVVEEGTKDALQNLPRGTAPGDFLDAIVVGLDMLIKRFGNT-KGK 107
Query: 112 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN 171
LCLITD+ PL+DP GTKEDQV TIA QM ++M IV R S G H V+ EN
Sbjct: 108 HRLCLITDSQHPLRDPPEGTKEDQVDTIAEQMKKHDIKMDCIVFRES--GVQHNSVMDEN 165
Query: 172 DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTG 231
D LL F +S AK + VD+ TSL GA KTR + PVTIFRGDLE+S +KIKVWVYKKT
Sbjct: 166 DQLLYHFRDRSVAKVVQVDTPTSLLGALKTRIVLPVTIFRGDLEVSSNLKIKVWVYKKTS 225
Query: 232 EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 291
EEKFPTLKKYSD+AP +DKFA+HEVKVD+EYKS+ +P VVPP+QRIKGY YGPQVVPIS
Sbjct: 226 EEKFPTLKKYSDQAPPSDKFASHEVKVDFEYKSILEPDTVVPPDQRIKGYLYGPQVVPIS 285
Query: 292 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKE 351
SAEWEAVKFKPEK VKLLGF D S+I RHY+MKDVN F+ EPGN +ATVAVSA+ARAM+E
Sbjct: 286 SAEWEAVKFKPEKGVKLLGFADRSSIPRHYFMKDVNSFVPEPGNKKATVAVSAIARAMQE 345
Query: 352 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFP 411
MNKVAI+RCVWRQGQ +V GVLTPN+S N+PDSF+FN+LPF+ED+REFQF SFS P
Sbjct: 346 MNKVAILRCVWRQGQGNVAFGVLTPNISSVNNVPDSFFFNILPFSEDIREFQFRSFSSLP 405
Query: 412 VSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPP 471
S QP E+QQEAAD+LVKMLDLAP G+ EIL+P+ TPNP LERFY L+LKS+ DA P
Sbjct: 406 SSSQPTEEQQEAADSLVKMLDLAPPGREEILRPDFTPNPMLERFYSFLDLKSKEPDANAP 465
Query: 472 PLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEP--N 529
PLD L++ITEPD ++ I F +K+NPK KK+ + + D+ +
Sbjct: 466 PLDKCLRRITEPDSDIIDYQAPLIQNLGKAFELKDNPKRKKARTQERLNYTAADDQTKKS 525
Query: 530 GDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFG 589
D A+A+ + V KIGDL P+QDFEAM++ R WV KAIE+M+
Sbjct: 526 ADPYAEKAKAIEVLYPS-AEKVGKIGDLNPVQDFEAMLTERSSSIWVQKAIEEMQKYTTV 584
Query: 590 LLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRK-RNFSTFFDFLMS 648
L+ENS +G Y KA+E +VALRK CI+EQEP +FN L K+ K + + + FF L S
Sbjct: 585 LIENSPQGDYYQKALECIVALRKACIIEQEPNEFNQFLTKLYKRLKNVDDVAKFFQLLSS 644
Query: 649 KKLSLISKSEAVDSDITDDEAGSFIVKSQ 677
K +SLISK EA DSD+T++ A SF +K +
Sbjct: 645 KNVSLISKEEAPDSDVTEEMARSFYLKPE 673
>gi|223943233|gb|ACN25700.1| unknown [Zea mays]
gi|414874015|tpg|DAA52572.1| TPA: hypothetical protein ZEAMMB73_970034 [Zea mays]
Length = 669
Score = 736 bits (1901), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/686 (56%), Positives = 489/686 (71%), Gaps = 30/686 (4%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR RE ++LLLDV PSMH VL + L+Y ++ EVG++LFGT+ T NEL
Sbjct: 1 MARNREVVILLLDVGPSMHGVLLE------------LVYNRSDEVGIVLFGTKGTCNELA 48
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDY---------MLIKKYGETYKGK 111
K++GGY+HV V+ DIKVVD Q+L++LP G+ GD+ M+I+K+G T KGK
Sbjct: 49 KDIGGYKHVTVIHDIKVVDEGTAQALQNLPLGSAPGDFLDSIVVGLDMVIRKFGIT-KGK 107
Query: 112 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN 171
+ LCLIT A L+DP GTKEDQV TIA + ++M+ I+ R G H V+ EN
Sbjct: 108 RRLCLITGAQELLRDPPEGTKEDQVDTIANMLKKHNIKMECIIFREP--GVHHNDVMEEN 165
Query: 172 DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTG 231
D LL+ F +S AK + VD+ TSL GA KTR++ PVT+FRGDLE++ KIKVWVYKKT
Sbjct: 166 DRLLHQFRNRSVAKVVQVDNPTSLLGALKTRNVLPVTVFRGDLEVNSNFKIKVWVYKKTA 225
Query: 232 EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 291
EEKFPTLKKYSDKAP DKFA+HEVKVDYEYKSV +P KVVPP+QRIKGY YGPQV+P+S
Sbjct: 226 EEKFPTLKKYSDKAPPNDKFASHEVKVDYEYKSVVEPDKVVPPDQRIKGYLYGPQVIPVS 285
Query: 292 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKE 351
+AEWEAVKFKPEK VKLLGFTD S++ RH +MKDV LFI EPGN +A++AVSA+ARAM +
Sbjct: 286 NAEWEAVKFKPEKGVKLLGFTDRSSVPRHQFMKDVCLFIPEPGNMKASLAVSAIARAMHQ 345
Query: 352 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFP 411
MNKVAIVRCVWRQGQ +V +GVLTPN+S NI DSFYFNVLPFAED+REFQF SFS P
Sbjct: 346 MNKVAIVRCVWRQGQGNVAIGVLTPNISSVNNIQDSFYFNVLPFAEDIREFQFRSFSSLP 405
Query: 412 VSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPP 471
S QP E+QQEAADNLVKMLDLAP G+ E+L+PE TPNP LERFY +L+LKS+ DA P
Sbjct: 406 SSSQPTEEQQEAADNLVKMLDLAPPGR-EVLKPEFTPNPILERFYSYLDLKSKQPDANVP 464
Query: 472 PLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGD 531
PL+ SL++ITEPDP ++ + I FV+K+NPK KK+ + + D+
Sbjct: 465 PLERSLRRITEPDPDVVGQQTQLIQNLSKAFVLKDNPKKKKARTQDMLAYTGAGDQAK-- 522
Query: 532 GSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLL 591
SV D N+ S V I D P+QDFEAM+++R W KAI DM+N I LL
Sbjct: 523 -SVEDRVLENTHPSTENVVA--IRDSNPVQDFEAMLAKRSSSTWTQKAIGDMQNYIAALL 579
Query: 592 ENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKKL 651
+NS++G NY KA+E +LRK CI+EQEP++FN L K+ + ++ + + FF L SK +
Sbjct: 580 QNSSDGGNYQKALECFASLRKACIIEQEPQEFNQFLTKIYERLKEGDAAKFFQLLSSKNI 639
Query: 652 SLISKSEAVDSDITDDEAGSFIVKSQ 677
SLI+K EA DSD+T++ A SF +K +
Sbjct: 640 SLINKEEAPDSDVTEEMARSFYLKRE 665
>gi|242037345|ref|XP_002466067.1| hypothetical protein SORBIDRAFT_01g000620 [Sorghum bicolor]
gi|241919921|gb|EER93065.1| hypothetical protein SORBIDRAFT_01g000620 [Sorghum bicolor]
Length = 670
Score = 728 bits (1879), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/671 (56%), Positives = 481/671 (71%), Gaps = 16/671 (2%)
Query: 18 MHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKV 77
MH VL +V+ +CS L+ KKL+Y ++ EVG++LFGT+ T NEL KE+GGY+HV V +DIKV
Sbjct: 1 MHGVLQEVKNICSTLVHKKLVYNRSDEVGIVLFGTKGTCNELAKELGGYKHVTVTRDIKV 60
Query: 78 VDGHLVQSLKHLPQGTCAGDY---------MLIKKYGETYKGKKHLCLITDALCPLKDPD 128
VD Q+L++LP G+ GD+ M+++K+G T KGK+ LCLIT A L+DP
Sbjct: 61 VDEGAAQALQNLPLGSAPGDFLDSIVVGLDMVMRKFGNT-KGKRRLCLITSAQDLLRDPP 119
Query: 129 VGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLF 188
GTKE+QV TIA + ++++ I+ R G V+ END LL F +S AK +
Sbjct: 120 EGTKEEQVDTIADMLKKHSIKLECIIFREP--GVLRNAVMEENDRLLYQFRNRSVAKVVQ 177
Query: 189 VDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPST 248
VDS TSL GA KTR++ PVT+FRGDLE++ KIKVWVYKKT EEKFPTLKKYSDKAP +
Sbjct: 178 VDSPTSLLGALKTRNVLPVTVFRGDLEVNSNFKIKVWVYKKTAEEKFPTLKKYSDKAPPS 237
Query: 249 DKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKL 308
DK A+HEVKVDYEYKSV +P K+VPP+QRIKGY YGPQV+P+S+AEWEAVKFKPEK VKL
Sbjct: 238 DKLASHEVKVDYEYKSVVEPDKIVPPDQRIKGYLYGPQVIPVSNAEWEAVKFKPEKGVKL 297
Query: 309 LGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQS 368
LGFTD SN+ RH++MKDV LFI EPGN +AT+AVSA+ARAM +MNK AIVRCVWRQGQ +
Sbjct: 298 LGFTDRSNVPRHHFMKDVCLFIPEPGNIKATLAVSAIARAMHQMNKAAIVRCVWRQGQGN 357
Query: 369 VVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV 428
V +GVLTPN+S N+ DSFYFNVLPFAED+REFQF SFS P S QP E+QQEAADNLV
Sbjct: 358 VALGVLTPNISAVDNVQDSFYFNVLPFAEDIREFQFRSFSSLPSSSQPTEEQQEAADNLV 417
Query: 429 KMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLL 488
KMLDLAP G+ E+L+PE TPNP LERFY +L+LKS+ DA PPLD SL++ITEPDP ++
Sbjct: 418 KMLDLAPPGR-EVLKPEFTPNPMLERFYSYLDLKSKQPDANVPPLDRSLRRITEPDPNVV 476
Query: 489 AESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNG--DGSVSDAQAVNSMESK 546
+ I F +KENPK KK+ + + D+ + SV + + +
Sbjct: 477 GQQTQLIQNLGKAFELKENPKKKKARGQDILAYTGAGDQAKSVEEPSVEKDRVLENTHP- 535
Query: 547 PVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVEL 606
P V I D P+ DFEAM++ R WV KAIEDM+N LL+ S++G NY KA+E
Sbjct: 536 PTENVGAIRDSNPVHDFEAMLANRSSSTWVQKAIEDMQNYTAALLQKSHDGSNYQKALEC 595
Query: 607 LVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKKLSLISKSEAVDSDITD 666
ALRK CI+EQEP++FN+ L K+ + ++ + + FF L SK +SLISK EA DSD+T+
Sbjct: 596 FAALRKACIIEQEPQEFNEFLTKIYERLKEGDAAKFFQLLSSKNISLISKEEAPDSDVTE 655
Query: 667 DEAGSFIVKSQ 677
+ A SF +K +
Sbjct: 656 EMAKSFYLKRE 666
>gi|222626200|gb|EEE60332.1| hypothetical protein OsJ_13430 [Oryza sativa Japonica Group]
Length = 643
Score = 698 bits (1802), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/671 (56%), Positives = 463/671 (69%), Gaps = 39/671 (5%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR +EAL+LLLDV PSMH VL +VE +CS L+ KKL+Y ++ E+GV+LFGT+ET NEL
Sbjct: 1 MARNKEALVLLLDVGPSMHGVLQEVENICSTLVHKKLVYNRSDEIGVVLFGTKETSNELA 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDYMLIKKYGETYKGKKHLCLITDA 120
KE+GGY+HV V +DIKVVD +L++LP+GT G K+ +CL+TDA
Sbjct: 61 KELGGYKHVVVARDIKVVDEETTNALQNLPRGTSPG--------------KQRMCLVTDA 106
Query: 121 LCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSK 180
PL+DP GTK+DQV TIA QM ++M I+ R S G H V+ END LL F +
Sbjct: 107 QHPLRDPPQGTKKDQVDTIADQMKRHEIKMDCIIFRES--GVRHNAVMDENDQLLYHFRE 164
Query: 181 KSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKK 240
+S K + VDS TSL GA +TR++ PVT+FRGDLE VWVYKKT EEKFPTLKK
Sbjct: 165 RSVTKVVHVDSPTSLLGALRTRNVLPVTVFRGDLE--------VWVYKKTSEEKFPTLKK 216
Query: 241 YSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKF 300
YSDKAP++DKFA+HEVKVDYEYKSV +P VVPP+QRIKGY YGPQVVPISSAEWEAVKF
Sbjct: 217 YSDKAPASDKFASHEVKVDYEYKSVLEPDTVVPPDQRIKGYLYGPQVVPISSAEWEAVKF 276
Query: 301 KPEKSVKLLGFTDASN--------ILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEM 352
KPEK ++ D SN RHY+MKDV F+ EPGN++A AVSALARAM EM
Sbjct: 277 KPEKVLR----PDVSNGDTVHLFYFNRHYFMKDVFSFVPEPGNTKAVAAVSALARAMSEM 332
Query: 353 NKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPV 412
NKVAI+RCVWRQGQ +V +GVLTPN+S N+ DSFYFN+LPFAED+REFQF SFS P
Sbjct: 333 NKVAILRCVWRQGQGNVALGVLTPNISSAKNVLDSFYFNILPFAEDIREFQFRSFSSLPS 392
Query: 413 SWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPP 472
S QP ++QQEAADNLVKMLDLAP G+ EIL+P+ TPNP LERFY +L+LKS+ DA PP
Sbjct: 393 SSQPTKEQQEAADNLVKMLDLAPPGREEILKPDFTPNPMLERFYRYLDLKSKQPDANVPP 452
Query: 473 LDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDG 532
LD LKKITEPDP ++ I F +KENPK KK R R +G+D+
Sbjct: 453 LDKCLKKITEPDPDVIDYQAPLIKKLGNVFELKENPK-KKKARTQDRLTYTGADDQAKLL 511
Query: 533 SVSDAQAVNSMES--KPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGL 590
A+ V E+ P +IGD P+QDFEAM+++R WV AIE+M+ I L
Sbjct: 512 EEPSAEKVGVSEALYPPKKKAGEIGDHNPVQDFEAMLTQRSSSTWVQTAIEEMQKYITAL 571
Query: 591 LENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKK 650
+++S + N+ KA+E LVALRK CI+EQEP ++N + K+C+ R F L SKK
Sbjct: 572 IQDSCDRDNHQKALECLVALRKACIIEQEPNEYNGFVTKLCQKFRPAGDKIFLQLLSSKK 631
Query: 651 LSLISKSEAVD 661
SLISK EA D
Sbjct: 632 ASLISKEEAPD 642
>gi|218194141|gb|EEC76568.1| hypothetical protein OsI_14396 [Oryza sativa Indica Group]
Length = 643
Score = 697 bits (1798), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/671 (55%), Positives = 462/671 (68%), Gaps = 39/671 (5%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR +EAL+LLLDV PSMH VL +VE +CS L+ KKL+Y ++ E+GV+LFGT+ET NEL
Sbjct: 1 MARNKEALVLLLDVGPSMHGVLQEVENICSTLVHKKLVYNRSDEIGVVLFGTKETSNELA 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDYMLIKKYGETYKGKKHLCLITDA 120
KE+GGY+HV V +DIKVVD +L++LP+GT G K+ +CL+TDA
Sbjct: 61 KELGGYKHVVVARDIKVVDEETTNALQNLPRGTSPG--------------KQRMCLVTDA 106
Query: 121 LCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSK 180
PL+DP GTK+DQV TIA QM ++M I+ R S G H V+ END LL F +
Sbjct: 107 QHPLRDPPQGTKKDQVDTIADQMKRHEIKMDCIIFRES--GVRHNAVMDENDQLLYHFRE 164
Query: 181 KSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKK 240
+S K + VDS TSL GA +TR++ PVT+FRGDLE VWVYKKT EEKFPTLKK
Sbjct: 165 RSVTKVVHVDSPTSLLGALRTRNVLPVTVFRGDLE--------VWVYKKTSEEKFPTLKK 216
Query: 241 YSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKF 300
YSDKAP++DKFA+HEVKVDYEYKSV +P VVPP+QRIKGY YGPQVVPISSAEWEAVKF
Sbjct: 217 YSDKAPASDKFASHEVKVDYEYKSVLEPDTVVPPDQRIKGYLYGPQVVPISSAEWEAVKF 276
Query: 301 KPEKSVKLLGFTDASN--------ILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEM 352
KPEK ++ D SN RHY+MKDV F+ EPGN++A AVSALARAM EM
Sbjct: 277 KPEKVLR----PDVSNGDTVHLFYFNRHYFMKDVFSFVPEPGNTKAVAAVSALARAMSEM 332
Query: 353 NKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPV 412
NKVAI+RCVWRQGQ +V +GVLTPN+S N+ DSFYFN+LPFAED+REFQF SFS P
Sbjct: 333 NKVAILRCVWRQGQGNVALGVLTPNISSAKNVLDSFYFNILPFAEDIREFQFRSFSSLPS 392
Query: 413 SWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPP 472
S QP ++QQEAADNLVKMLDLAP G+ EIL+P+ TPNP LERFY +L+LKS+ DA PP
Sbjct: 393 SSQPTKEQQEAADNLVKMLDLAPPGREEILKPDFTPNPMLERFYRYLDLKSKQPDANVPP 452
Query: 473 LDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDG 532
LD LKKITEPDP ++ I F +KENPK KK R R +G+D+
Sbjct: 453 LDKCLKKITEPDPDVIDYQAPLIKKLGNVFELKENPK-KKKARTQDRLTYTGADDQAKLL 511
Query: 533 SVSDAQAVNSMES--KPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGL 590
A+ V E+ P +IGD P+QDFEAM+++R WV AIE+M+ I L
Sbjct: 512 EEPSAEKVGVSEALYPPKKKAGEIGDHNPVQDFEAMLTQRSSSTWVQTAIEEMQKYITAL 571
Query: 591 LENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKK 650
+++S + N+ KA+E LVALRK CI+EQEP ++N + K+C+ R F L SK
Sbjct: 572 IQDSCDRDNHQKALECLVALRKACIIEQEPNEYNGFVTKLCQKFRPAGDKIFLQLLSSKN 631
Query: 651 LSLISKSEAVD 661
SLISK EA D
Sbjct: 632 ASLISKEEAPD 642
>gi|147828533|emb|CAN68627.1| hypothetical protein VITISV_004463 [Vitis vinifera]
Length = 812
Score = 684 bits (1765), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/486 (69%), Positives = 391/486 (80%), Gaps = 5/486 (1%)
Query: 176 NIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKF 235
N+ S ++ L V + +SL IS ++ LE K VWVYKKT E +F
Sbjct: 305 NLKSWGATWAILLVRTNSSL--IMLLLQISSCSVLDAVLERPVK---AVWVYKKTAEXRF 359
Query: 236 PTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEW 295
PTLK+YSD+AP TDKFATHEVKVD+EYKSVE+ SKVVPPEQRIKGYRYGPQV+PISSAEW
Sbjct: 360 PTLKQYSDQAPPTDKFATHEVKVDFEYKSVEESSKVVPPEQRIKGYRYGPQVIPISSAEW 419
Query: 296 EAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKV 355
EAVKFKPEK VKLLGFTDASN++RHYYM DVN+FIAEPGN++A + VSALARAMKEMNKV
Sbjct: 420 EAVKFKPEKGVKLLGFTDASNVMRHYYMHDVNIFIAEPGNTKAMLTVSALARAMKEMNKV 479
Query: 356 AIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQ 415
AI+RCVWRQGQ SVV+G+LTPNVS+K +IPDSFYFNVLP+AEDVREFQFPSFS P SWQ
Sbjct: 480 AILRCVWRQGQGSVVIGILTPNVSDKDDIPDSFYFNVLPYAEDVREFQFPSFSNLPASWQ 539
Query: 416 PNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDD 475
PNE+QQEAADNLVKMLDLAPSG E L P+LTPNP LERFY HLELKS+H DAA PPLD+
Sbjct: 540 PNEEQQEAADNLVKMLDLAPSGSRETLLPDLTPNPVLERFYRHLELKSKHPDAAVPPLDE 599
Query: 476 SLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVS 535
SLKKITEPDP LL++++ IDAF +F +KENPKLKKSTRR R +PSG +E G S
Sbjct: 600 SLKKITEPDPKLLSQNKPIIDAFRRRFELKENPKLKKSTRRLXRXRPSGLNEEASMGDGS 659
Query: 536 DAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSN 595
D QA+ S+E+ V V+KIGD TPIQDFEAMMSRRD P+WV KAI +MKNKIF L+E+S
Sbjct: 660 DGQAIKSIENTSTVGVEKIGDSTPIQDFEAMMSRRDSPEWVGKAINEMKNKIFDLVEDSY 719
Query: 596 EGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKKLSLIS 655
EG NY KA+E LVALRKGC+LEQEPKQFND L + K C K N ++F + L SK++ LI+
Sbjct: 720 EGDNYLKALEYLVALRKGCVLEQEPKQFNDFLHHLYKYCEKHNLNSFCESLASKEIMLIN 779
Query: 656 KSEAVD 661
K+EA D
Sbjct: 780 KTEAAD 785
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 126/196 (64%), Positives = 153/196 (78%), Gaps = 7/196 (3%)
Query: 36 KLIYGKNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCA 95
KLIY KN EVG++LFGTE+T NELTKEVGGYEHV VL+ IKVVDG LV++L+ LP+GT A
Sbjct: 13 KLIYSKNDEVGIVLFGTEDTNNELTKEVGGYEHVVVLRHIKVVDGDLVEALQQLPRGTVA 72
Query: 96 -------GDYMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGL 148
G MLIKK+G T KGKK LCLIT ALCP+KDP GTKEDQ+ TIA QM A G+
Sbjct: 73 VLDAIVVGMDMLIKKFGSTNKGKKRLCLITSALCPIKDPYEGTKEDQIGTIAEQMSAHGM 132
Query: 149 RMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVT 208
+++ IV R LSG MR++ END LL +FS K++AKTL+V++ TSL GA +TR I+PVT
Sbjct: 133 KLECIVARGRLSGNVDMRIMDENDLLLKLFSTKTTAKTLYVETPTSLLGALRTRSIAPVT 192
Query: 209 IFRGDLELSEKMKIKV 224
IFRGDLELS KM+IK+
Sbjct: 193 IFRGDLELSPKMRIKL 208
>gi|168035223|ref|XP_001770110.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678636|gb|EDQ65092.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 708
Score = 611 bits (1576), Expect = e-172, Method: Compositional matrix adjust.
Identities = 327/688 (47%), Positives = 453/688 (65%), Gaps = 29/688 (4%)
Query: 9 LLLLDVSPSMHSVLPDVEKLCSRLIQKKLIY-GKNHEVGVILFGTEETENELTKEVGGYE 67
+LLLDV PSMH L DV K + LI +K IY GKN EVGV+ FGT ET+NEL KE+ GY
Sbjct: 1 MLLLDVGPSMHPYLADVSKCMTTLIHRKAIYQGKNDEVGVVYFGTTETDNELNKEMEGYH 60
Query: 68 HVKVLQDIKVVDGHLVQSLKHLPQGTCAGDY---------MLIKKYGETYKGKKHLCLIT 118
++ V++ I VV L L+++P G + D+ ML+KK GE KG K LCL+T
Sbjct: 61 NIVVVEPIAVVSQDLAHRLENIPCGFGSSDFLDVIVVGCDMLMKKLGENKKGNKRLCLVT 120
Query: 119 DALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIF 178
DA P+++P GT EDQV IA +M G+++ +VVR + + +ND LL++F
Sbjct: 121 DAASPVREPSEGTVEDQVRNIAERMGEQGIKLDVVVVRVGQNFLINSTGQHQNDVLLDLF 180
Query: 179 SKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTL 238
+ A+ + TS+ G + R +SP T++RGD EL+ ++IKVWVYKKT +EK PTL
Sbjct: 181 KLHTQAEIGIARTATSMLGIIRPRAVSPTTLYRGDFELTPDLRIKVWVYKKTSQEKLPTL 240
Query: 239 KKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAV 298
KKYS++AP++D AT EVK+D EYKS ++P VPPEQR K Y+YG +PISS+ +++
Sbjct: 241 KKYSNEAPASDSHATREVKIDTEYKSSDNPDVSVPPEQRTKAYKYGKNFIPISSSMEDSL 300
Query: 299 KFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIV 358
KFKPEK VKL GF S+I RHY++K+ ++F+ EPG+ ++ VAVSALARAMKE + A+V
Sbjct: 301 KFKPEKGVKLKGFVKRSDIPRHYFLKESSIFLPEPGHQKSIVAVSALARAMKEHDYAAVV 360
Query: 359 RCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNE 418
RCVWRQGQ +VV+G+L P VS + N+ D FYFNV+PF +D+REF+F SFS P S QP+
Sbjct: 361 RCVWRQGQTNVVMGILLPFVSAQENVADGFYFNVIPFLDDMREFRFTSFSSMPESLQPSC 420
Query: 419 QQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLK 478
+QQEAA NLV+MLDL+PS E+LQPE T NP L+RFY+ L L+S + +A PPLD+SL+
Sbjct: 421 EQQEAAYNLVRMLDLSPSEDEELLQPEQTINPVLQRFYYFLHLRSLNPEAKVPPLDESLR 480
Query: 479 KITEPDPTLLAESQSAIDAFCGQFV----IKENPK--LKKSTRR-----FLREKPSGSD- 526
I EPD L E+Q AI+ F Q I+EN K K RR ++++P+ D
Sbjct: 481 CIVEPDLLRLDENQYAINQFSQQLTLTPNIQENGKKSFWKGERRDGNVLQIKDEPAFMDV 540
Query: 527 EPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNK 586
+ GSVS NS+ S+ V++IG P+ DFEA+M+RRD P+WV KAI+ MK
Sbjct: 541 DMKNPGSVS----FNSLASR---KVEEIGSANPVADFEALMARRDSPEWVGKAIQGMKKM 593
Query: 587 IFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFL 646
I+ LL+++ G Y KA+ L++LR GC++++EP +FN L + F+ +
Sbjct: 594 IYDLLDSAYNGNTYEKALACLISLRLGCVIQEEPLEFNFFLRDLKTKGSTIRLQDFWQQV 653
Query: 647 MSKKLSLISKSEAVDSDITDDEAGSFIV 674
M KK++LISK EA DS++ EA SF+
Sbjct: 654 MGKKITLISKDEAPDSNVGAAEAASFLT 681
>gi|302755234|ref|XP_002961041.1| hypothetical protein SELMODRAFT_74928 [Selaginella moellendorffii]
gi|300171980|gb|EFJ38580.1| hypothetical protein SELMODRAFT_74928 [Selaginella moellendorffii]
Length = 701
Score = 598 bits (1543), Expect = e-168, Method: Compositional matrix adjust.
Identities = 314/688 (45%), Positives = 450/688 (65%), Gaps = 33/688 (4%)
Query: 5 REALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELTKEVG 64
+E+L+ +LDVSPSMH L V K + ++++KL KN EVG++LFG EET+N+L +EVG
Sbjct: 1 QESLVFVLDVSPSMHPYLHHVSKATAAVLERKLFNHKNDEVGLVLFGMEETDNDLRREVG 60
Query: 65 -GYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDY---------MLIKKYGETYKGKKHL 114
YE + V + I +VDG LV L+ LP+G AGDY M+ KKYG+ KG K +
Sbjct: 61 EAYEGI-VSEPITLVDGELVTKLRALPRGCYAGDYVDAIVVATDMIFKKYGDGKKGNKRI 119
Query: 115 CLITDALCPLKDPDVG-TKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDN 173
CLITDA P+K+P G + +QV IA +M G+R ++R + E E+
Sbjct: 120 CLITDAQSPIKEPMEGMSMMEQVEKIAEKMEDHGVRFDAAILRMN---EEKRESGSESTE 176
Query: 174 LLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEE 233
+L + ++ + V+S L GA K R ++P T++RGD+E++ +IKVWVYKK +E
Sbjct: 177 ILENLASRTHGEVTTVESPLCLFGALKPRTVTPTTLYRGDMEMTPGARIKVWVYKKAAQE 236
Query: 234 KFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSA 293
+ P+LK YSDKAP +D ATH VK+D +YKS +DP+ +P QR KGY YG Q++P++
Sbjct: 237 RVPSLKVYSDKAPQSDALATHVVKMDTDYKSSDDPTVSIPKAQRAKGYYYGQQLIPVTPD 296
Query: 294 EWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMN 353
++KF +K VKLLGFT+A+NI RHYYMK+ NLF+ EPGN +A++A+SALARA+K+ N
Sbjct: 297 MELSLKFTADKGVKLLGFTEAANIPRHYYMKEPNLFVPEPGNRKASLAMSALARALKQTN 356
Query: 354 KVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVS 413
VA+VRCVWRQGQ++VV+GVLTPN+S + I DSFYFN++PFAED+REF F SF P S
Sbjct: 357 MVALVRCVWRQGQRNVVMGVLTPNLSFEDGIADSFYFNIVPFAEDIREFGFASFDDRPAS 416
Query: 414 WQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPL 473
P++QQ+EA D LV+MLDL+PS E LQPE T NP L+RFYH L LKS + DA+ P L
Sbjct: 417 QLPSKQQEEATDLLVQMLDLSPSDSVESLQPEKTSNPVLQRFYHFLYLKSLNPDASVPQL 476
Query: 474 DDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREK-------PSGSD 526
D++LKK+ EPD +E + C QF +K K++ +F +++
Sbjct: 477 DETLKKVIEPD--FSSEHIEKLQGLCSQFTLK-----TKNSTKFWKDRIEAAAKDDDAEA 529
Query: 527 EPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNK 586
+P+ D S S S +S V+++G L P+QDF+ +++RRD +WV KAI+ MK
Sbjct: 530 KPDVDTSGSGL----SFDSFATRQVEEVGSLNPVQDFQTLLARRDSDEWVGKAIQGMKKI 585
Query: 587 IFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFL 646
I LL++S +G Y KA+ L ALR GC++++E K+FND + C+ + S F+D +
Sbjct: 586 IIDLLDSSYKGNTYDKALTCLAALRSGCVMQEESKEFNDFFRVLADKCQGKRLSDFWDAV 645
Query: 647 MSKKLSLISKSEAVDSDITDDEAGSFIV 674
+ +KL+LISK E DSD+T++ A +F+
Sbjct: 646 IQRKLTLISKGEVSDSDVTEEAALAFLT 673
>gi|302767102|ref|XP_002966971.1| hypothetical protein SELMODRAFT_86463 [Selaginella moellendorffii]
gi|300164962|gb|EFJ31570.1| hypothetical protein SELMODRAFT_86463 [Selaginella moellendorffii]
Length = 701
Score = 597 bits (1539), Expect = e-168, Method: Compositional matrix adjust.
Identities = 313/688 (45%), Positives = 449/688 (65%), Gaps = 33/688 (4%)
Query: 5 REALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELTKEVG 64
+E+L+ +LDVSPSMH L V K + ++++KL KN EVG++LFG EET+N+L +EVG
Sbjct: 1 QESLVFVLDVSPSMHPYLHHVSKATAAVLERKLFNHKNDEVGLVLFGMEETDNDLRREVG 60
Query: 65 -GYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDY---------MLIKKYGETYKGKKHL 114
YE + V + I +VDG LV L+ LP+G AGDY M+ KKYG+ KG K +
Sbjct: 61 EAYEGI-VSEPITLVDGELVTKLRALPRGCYAGDYVDAIVVATDMIFKKYGDGKKGNKRI 119
Query: 115 CLITDALCPLKDPDVG-TKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDN 173
CLITDA P+K+P G + +QV IA +M G++ ++R + E E+
Sbjct: 120 CLITDAQSPIKEPMEGMSMMEQVEKIAEKMEDHGVKFDAAILRMN---EEKRESGSESTE 176
Query: 174 LLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEE 233
+L + ++ + V+S L GA K R ++P T++RGD+E++ +IKVWVYKK +E
Sbjct: 177 ILENLASRTHGEVTTVESPLCLFGALKPRTVTPTTLYRGDMEMTPGARIKVWVYKKAAQE 236
Query: 234 KFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSA 293
+ P+LK YSDKAP +D ATH VK+D +YKS +DP+ +P QR KGY YG Q++P++
Sbjct: 237 RVPSLKVYSDKAPQSDALATHVVKMDTDYKSSDDPTVSIPKAQRAKGYYYGQQLIPVTPD 296
Query: 294 EWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMN 353
++KF +K VKLLGFT+A+NI RHYYMK+ NLF+ EPGN +A++A+SALARA+K+ N
Sbjct: 297 MELSLKFTADKGVKLLGFTEAANIPRHYYMKEPNLFVPEPGNRKASLAISALARALKQTN 356
Query: 354 KVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVS 413
VA+VRCVWRQGQ++VV+GVLTPN+S + I DSFYFN++PFAED+REF F SF P S
Sbjct: 357 MVALVRCVWRQGQRNVVMGVLTPNLSFEDGIADSFYFNIVPFAEDIREFGFASFDDRPAS 416
Query: 414 WQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPL 473
P++QQ+EA D LV+MLDL+PS E LQPE T NP L+RFYH L LKS + DA P L
Sbjct: 417 QLPSKQQEEATDLLVQMLDLSPSDSVESLQPEKTSNPVLQRFYHFLYLKSLNPDALVPQL 476
Query: 474 DDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREK-------PSGSD 526
D++LKK+ EPD +E + C QF +K K++ +F +++
Sbjct: 477 DETLKKVIEPD--FSSEHIEKLQGLCSQFTLK-----TKNSTKFWKDRIEAAAKDDDAEA 529
Query: 527 EPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNK 586
+P+ D S S S +S V+++G L P+QDF+ +++RRD +WV KAI+ MK
Sbjct: 530 KPDVDTSGSGL----SFDSFATRQVEEVGSLNPVQDFQTLLARRDSDEWVGKAIQGMKKI 585
Query: 587 IFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFL 646
I LL++S +G Y KA+ L ALR GC++++E K+FND + C+ + S F+D +
Sbjct: 586 IIDLLDSSYKGNTYDKALTCLAALRSGCVMQEESKEFNDFFRVLADKCQGKRLSDFWDAV 645
Query: 647 MSKKLSLISKSEAVDSDITDDEAGSFIV 674
+ +KL+LISK E DSD+T++ A +F+
Sbjct: 646 IQRKLTLISKGEVSDSDVTEEAALAFLT 673
>gi|326524151|dbj|BAJ97086.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 478
Score = 596 bits (1536), Expect = e-167, Method: Compositional matrix adjust.
Identities = 295/467 (63%), Positives = 361/467 (77%), Gaps = 12/467 (2%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR +E L+LLLDV PSMH L ++E +C+ L++KKL++ ++ EVGV+LFGT+ET N+L
Sbjct: 1 MARNKEGLVLLLDVGPSMHRALQEIENVCTTLVRKKLVFHRSDEVGVVLFGTKETHNDLA 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDY---------MLIKKYGETYKGK 111
+E+GGY+HV V DIKVVD +L++LP+GT GD+ MLIK++G+T K K
Sbjct: 61 RELGGYKHVLVKHDIKVVDEETKDALENLPRGTAPGDFLDAIVVGLDMLIKRFGDT-KAK 119
Query: 112 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN 171
+ LCLITDA L+DP GTKEDQV TIA QM ++M IV R + G H V+ EN
Sbjct: 120 QRLCLITDAQHLLRDPPQGTKEDQVDTIADQMKKHDIKMDCIVFREA--GVQHNSVMDEN 177
Query: 172 DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTG 231
D LL F +S AK + VD+ T+L GA KTR++ PVTIFRGDLE++ KIKVW YKKT
Sbjct: 178 DRLLYHFRDRSVAKVVQVDTPTALLGALKTRNVLPVTIFRGDLEVNSTFKIKVWAYKKTS 237
Query: 232 EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 291
EEKFPTLKKYSDKAP +D+FA+HEVKVDYEYKS+ +P VVPP+QRIKGY YGPQVVPIS
Sbjct: 238 EEKFPTLKKYSDKAPPSDQFASHEVKVDYEYKSILEPDTVVPPDQRIKGYLYGPQVVPIS 297
Query: 292 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKE 351
SAEWEAVKFKPEK VKLLGF D S++ R Y+MKDVN F+ EPGN++A VAVSALARAM++
Sbjct: 298 SAEWEAVKFKPEKGVKLLGFADRSSVPRSYFMKDVNSFVPEPGNTKAIVAVSALARAMQD 357
Query: 352 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFP 411
MNKVAI+RCVWRQ Q +V GVLTPN+S N+PDSFYFN+LPFAEDVR+F F SFS P
Sbjct: 358 MNKVAILRCVWRQNQANVAFGVLTPNISSVNNVPDSFYFNILPFAEDVRDFPFRSFSSLP 417
Query: 412 VSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHH 458
S QP E+QQEAADNLVKMLDLAP G+ EIL+P+ TPNP LE Y++
Sbjct: 418 PSSQPTEEQQEAADNLVKMLDLAPPGREEILRPDFTPNPMLEVEYYN 464
>gi|414874017|tpg|DAA52574.1| TPA: hypothetical protein ZEAMMB73_970034 [Zea mays]
Length = 463
Score = 539 bits (1389), Expect = e-150, Method: Compositional matrix adjust.
Identities = 275/456 (60%), Positives = 340/456 (74%), Gaps = 6/456 (1%)
Query: 222 IKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGY 281
+KVWVYKKT EEKFPTLKKYSDKAP DKFA+HEVKVDYEYKSV +P KVVPP+QRIKGY
Sbjct: 10 LKVWVYKKTAEEKFPTLKKYSDKAPPNDKFASHEVKVDYEYKSVVEPDKVVPPDQRIKGY 69
Query: 282 RYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVA 341
YGPQV+P+S+AEWEAVKFKPEK VKLLGFTD S++ RH +MKDV LFI EPGN +A++A
Sbjct: 70 LYGPQVIPVSNAEWEAVKFKPEKGVKLLGFTDRSSVPRHQFMKDVCLFIPEPGNMKASLA 129
Query: 342 VSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVRE 401
VSA+ARAM +MNKVAIVRCVWRQGQ +V +GVLTPN+S NI DSFYFNVLPFAED+RE
Sbjct: 130 VSAIARAMHQMNKVAIVRCVWRQGQGNVAIGVLTPNISSVNNIQDSFYFNVLPFAEDIRE 189
Query: 402 FQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLEL 461
FQF SFS P S QP E+QQEAADNLVKMLDLAP G+ E+L+PE TPNP LERFY +L+L
Sbjct: 190 FQFRSFSSLPSSSQPTEEQQEAADNLVKMLDLAPPGR-EVLKPEFTPNPILERFYSYLDL 248
Query: 462 KSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREK 521
KS+ DA PPL+ SL++ITEPDP ++ + I FV+K+NPK KK+ + +
Sbjct: 249 KSKQPDANVPPLERSLRRITEPDPDVVGQQTQLIQNLSKAFVLKDNPKKKKARTQDMLAY 308
Query: 522 PSGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIE 581
D+ SV D N+ S V I D P+QDFEAM+++R W KAI
Sbjct: 309 TGAGDQAK---SVEDRVLENTHPSTENVVA--IRDSNPVQDFEAMLAKRSSSTWTQKAIG 363
Query: 582 DMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFST 641
DM+N I LL+NS++G NY KA+E +LRK CI+EQEP++FN L K+ + ++ + +
Sbjct: 364 DMQNYIAALLQNSSDGGNYQKALECFASLRKACIIEQEPQEFNQFLTKIYERLKEGDAAK 423
Query: 642 FFDFLMSKKLSLISKSEAVDSDITDDEAGSFIVKSQ 677
FF L SK +SLI+K EA DSD+T++ A SF +K +
Sbjct: 424 FFQLLSSKNISLINKEEAPDSDVTEEMARSFYLKRE 459
>gi|41393255|gb|AAS01978.1| putative H-box binding protein, KAP2, with alternative splicing
isoforms [Oryza sativa Japonica Group]
Length = 325
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 207/328 (63%), Positives = 251/328 (76%), Gaps = 12/328 (3%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR +EAL+LLLDV PSMH VL +VE +CS L+ KKL+Y ++ E+GV+LFGT+ET NEL
Sbjct: 1 MARNKEALVLLLDVGPSMHGVLQEVENICSTLVHKKLVYNRSDEIGVVLFGTKETSNELA 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDY---------MLIKKYGETYKGK 111
KE+GGY+HV V +DIKVVD +L++LP+GT GD+ MLI+K+G KGK
Sbjct: 61 KELGGYKHVVVARDIKVVDEETTNALQNLPRGTSPGDFLDAIVVGLDMLIRKFGNI-KGK 119
Query: 112 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN 171
+ +CL+TDA PL+DP GTK+DQV TIA QM ++M I+ R S G H V+ EN
Sbjct: 120 QRMCLVTDAQHPLRDPPQGTKKDQVDTIADQMKRHEIKMDCIIFRES--GVRHNAVMDEN 177
Query: 172 DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTG 231
D LL F ++S K + VDS TSL GA +TR++ PVT+FRGDLE+S KIKVWVYKKT
Sbjct: 178 DQLLYHFRERSVTKVVHVDSPTSLLGALRTRNVLPVTVFRGDLEVSSSFKIKVWVYKKTS 237
Query: 232 EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 291
EEKFPTLKKYSDKAP++DKFA+HEVKVDYEYKSV +P VVPP+QRIKGY YGPQVVPIS
Sbjct: 238 EEKFPTLKKYSDKAPASDKFASHEVKVDYEYKSVLEPDTVVPPDQRIKGYLYGPQVVPIS 297
Query: 292 SAEWEAVKFKPEKSVKLLGFTDASNILR 319
SAEWEAVKFKPEK VKLLGFTD S+I R
Sbjct: 298 SAEWEAVKFKPEKGVKLLGFTDRSSISR 325
>gi|374351676|gb|AEZ36039.1| KU80, partial [Nicotiana benthamiana]
Length = 181
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 145/181 (80%), Positives = 167/181 (92%)
Query: 179 SKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTL 238
S KSS+K + V++ TSL GA +TR+ISPVTI+RGD E+S ++KIK WVYKKT EEKFPTL
Sbjct: 1 SNKSSSKVVHVETPTSLLGALRTRNISPVTIYRGDFEVSSQLKIKGWVYKKTSEEKFPTL 60
Query: 239 KKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAV 298
KKYS+KAP TDKFATHE+KVDYEYKS+EDP+KVVPPEQRIKG+RYGPQVVPISSAE EAV
Sbjct: 61 KKYSEKAPPTDKFATHEIKVDYEYKSIEDPNKVVPPEQRIKGFRYGPQVVPISSAELEAV 120
Query: 299 KFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIV 358
KFKPEKSVKLLGFTDASNI+RHYY+KDVN+FIAEPGN +A +A+S+LARAMKEMNKVAIV
Sbjct: 121 KFKPEKSVKLLGFTDASNIMRHYYLKDVNIFIAEPGNKKAILALSSLARAMKEMNKVAIV 180
Query: 359 R 359
R
Sbjct: 181 R 181
>gi|328875870|gb|EGG24234.1| ATP-dependent DNA helicase [Dictyostelium fasciculatum]
Length = 756
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 223/739 (30%), Positives = 364/739 (49%), Gaps = 75/739 (10%)
Query: 4 TREALLLLLDVSPSMH--------------------------------SVLPDVEKLCSR 31
T+EAL+++LD+ MH S + + K +
Sbjct: 6 TKEALVVILDIGLGMHKHHRSVGGGGISSSSSSLSSQSQHLLQSANNTSPIDEALKAATL 65
Query: 32 LIQKKLIYGKNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ 91
L Q+KLIYGK E+G++L GT+ET N L K+ GY+H+ +I+ ++ L+ +
Sbjct: 66 LFQQKLIYGKKDELGLVLIGTKETNNSLQKD--GYQHITTACNIEEPKVETLRFLESIQP 123
Query: 92 GTCAGDY---------MLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQ 142
G GD MLI K E K +K + L+T+A P+ D+ + Q +
Sbjct: 124 GESRGDVIDSLIVAMDMLIHK-TEKKKFQKRIFLVTNASDPINKDDLSILQQQFKNTDVK 182
Query: 143 MVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTR 202
+ G+ + L + + +N+ L F + + + V + +++
Sbjct: 183 LNVVGVDFTD---EEDLENKIQLTEKEKNEVFLRRFVQSVNGILVPVKQALEIMSFFRSQ 239
Query: 203 DISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEY 262
+ T FRG LE+S + I VW Y +T + PTLKK S A D A+ EVK + +
Sbjct: 240 SVLSRTGFRGVLEISTEFGIPVWGYLRTKIQTLPTLKKVSTVAQQADNPASLEVKQEKLH 299
Query: 263 KSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYY 322
S+ DP K + +KGY+YG ++P S + EA+K K +K LGF AS+I H+
Sbjct: 300 YSITDPDKEILDHDLLKGYKYGKSIIPYSKIDIEALKLSASKCLKTLGFAPASHIPLHHL 359
Query: 323 MKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKI 382
M + +A PG+ A +A+S + A+ E ++V IVR V R S +G L P++ K
Sbjct: 360 MGQTEVLVAPPGDQEAALALSGIIHALAETDQVIIVRFVKR-SNCSPYLGYLYPHI--KA 416
Query: 383 NIPDSFYFNVLPFAEDVREFQFPSFS-KFPV---SWQPNEQQQEAADNLVKMLDLAPSGK 438
N + YFN LPF +D+R +QFP S K P +QP Q AA +L++ +DL + +
Sbjct: 417 NY-ECLYFNPLPFIDDIRHYQFPPISPKNPQCKKQYQPTADQLNAAHSLIESMDLMTADE 475
Query: 439 GE------ILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQ 492
+ L+P+ T NP+L+ F+ L ++ H P LD + K PD +L +
Sbjct: 476 DDEGQPMPSLRPKYTYNPSLQHFFQCLHHRALHPKTPLPSLDPLISKYINPDENILERAS 535
Query: 493 SAIDAFCGQFVIKENPKLKKSTRR-----FLREKPSGSDEPNG---DGS----VSDAQAV 540
AI F +F + + K + L E+ D G DGS +D A
Sbjct: 536 DAIKDFHSKFTLTKVNNFKSDHKYRWKDGMLIEEEIKLDSYIGQDDDGSKKKRKADDLAD 595
Query: 541 NSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINY 600
S++ V+++G + P+Q+F+ M++RRD D VDKAI M+++I L+ +S + Y
Sbjct: 596 YSLDKLVSGYVNEVGSINPVQNFKDMLARRDI-DLVDKAINLMRSRIVQLVNDSLKDQFY 654
Query: 601 PKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKKLSLISKSEAV 660
KA+E +VALR+GCI E E FN L+++ + F+ L++ K++LI+ E+
Sbjct: 655 QKALECVVALRQGCIKESESDAFNTFLQELRDYFESKKRDDFWQLLVTWKITLINDQESD 714
Query: 661 DSDITDDEAGSFI-VKSQP 678
S ++++E+ F+ VK +P
Sbjct: 715 TSSVSEEESKKFLGVKPKP 733
>gi|330843657|ref|XP_003293765.1| hypothetical protein DICPUDRAFT_158675 [Dictyostelium purpureum]
gi|325075874|gb|EGC29713.1| hypothetical protein DICPUDRAFT_158675 [Dictyostelium purpureum]
Length = 769
Score = 275 bits (703), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 217/756 (28%), Positives = 370/756 (48%), Gaps = 99/756 (13%)
Query: 4 TREALLLLLDVSPSMHSVLP-----------DVEKLCSRLIQKKLIYGKNHEVGVILFGT 52
++EA++++LDV M SVL D + + L Q+KLIY K E+G++L GT
Sbjct: 6 SKEAVVIVLDVGIGMTSVLSNNNNNETSPIEDALRSVTLLYQQKLIYSKKDELGLVLIGT 65
Query: 53 EETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDY---------MLIKK 103
+ T+N L + GY+H+ V DI+ ++ L++L G GD MLIK+
Sbjct: 66 KGTKNNLQDD--GYQHITVASDIEEPSIETLKYLENLGPGESKGDVIDSLIVAMDMLIKR 123
Query: 104 YGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEP 163
E K +K + L+T+A P+ D+ +DQ I ++ G+ + E
Sbjct: 124 -TENKKYQKRIFLVTNAKDPINTDDLTIVKDQFKKIDVKLNIIGV---------DFTDEE 173
Query: 164 HMRVI--------IENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLE 215
++ I +N+ L F+ + V + +++ + T FRG LE
Sbjct: 174 ELKKINNKNFTNKQKNEIFLREFADSVDGVLVPVKQALEMMSFFRSQSVLQRTSFRGALE 233
Query: 216 LSEKMKIKVWVYKKTGEEKFPTLKKYS----DKAPSTDKFATHEVKVDYEYKSVEDPSKV 271
+S ++KI VW + K ++ PTLKK S +K P+ T +V + + S+ DP +
Sbjct: 234 ISPELKIPVWGFLKMKQQNLPTLKKISVLAQEKIPTP---TTLDVTQETFFYSITDPDQE 290
Query: 272 VPPEQRIKGYRYGPQVVPISSAEWEAVKFK-PEKSVKLLGFTDASNILRHYYMKDVNLFI 330
+ + +KGY+YG ++P S + +K+ + +K+LGF D +I +Y M +F+
Sbjct: 291 ISKDDLLKGYKYGKSLIPFSKIDESQLKYSSASRCLKVLGFVDRDSIPLYYNMGCSEMFV 350
Query: 331 AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNV------SEKINI 384
A P + +A ++SA R M E N+ +VR V G + +G + P + E I
Sbjct: 351 AAPKDKQAEQSLSAFIRGMIETNQAMLVRYVKTMGS-APYLGYMIPKIKSYNDDDENDGI 409
Query: 385 PDSF----YFNVLPFAEDVREFQFPSFS-KFPV---SWQPNEQQQEAADNLVKMLDLAPS 436
+ F YFN LP A+D+R++QFPS S K P+ S+ PN++Q +A L+ +DL
Sbjct: 410 EEKFIECLYFNHLPLADDIRQYQFPSLSLKNPLTRKSFIPNKEQLDATQQLIDSMDLMGG 469
Query: 437 GKG-------EILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLA 489
G ++L+P T NP L+ FY L +S H ++ P LD + + PD +L
Sbjct: 470 GGDGDEEESIQMLKPSFTYNPLLQHFYQCLHHRSLHPNSLIPKLDPIISQYINPDEQILE 529
Query: 490 ESQSAIDAFCGQFVIKENPKLKK--------------STRRFLREKPSGSDEPNGDGSVS 535
+S+++I F +F + ++ K S + + ++ +E N D V+
Sbjct: 530 KSKNSIKEFYLKFPLTKSINFNKLNNNNNQQQQQQQQSLKYYWKDGVLIGEEINLDSYVT 589
Query: 536 D------AQAVN-----SMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMK 584
D + +N S+ V+++G + P+Q+F+ M++RRD D VDKAI MK
Sbjct: 590 DDGSEFKKRKINDFSEFSLNKLISGYVNEVGTINPVQNFKDMLNRRDV-DLVDKAITLMK 648
Query: 585 NKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFD 644
+I L+ +S + Y KA E + LR GCI E E FN ++ + + + F+
Sbjct: 649 ERIIQLVNDSLKEQYYQKAFECIKELRNGCIRESEADSFNSFIKDIRSLYENKKKDDFWK 708
Query: 645 FLMSKK---LSLISKSEAVDSDITDDEAGSFIVKSQ 677
++ + + ++LIS+ E S I+ DEA F+ + Q
Sbjct: 709 YITTNQPYAINLISEDECDSSSISKDEANEFLNRKQ 744
>gi|403353375|gb|EJY76224.1| ATP-dependent DNA helicase [Oxytricha trifallax]
Length = 776
Score = 265 bits (676), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 227/779 (29%), Positives = 373/779 (47%), Gaps = 130/779 (16%)
Query: 4 TREALLLLLDVSPSMHSVL-PDVEKLCSR----------LIQKKLIYGKNHEVGVILFGT 52
+EA++++LDV +M+ L D E +R L ++KL+Y HE+G++L T
Sbjct: 2 NKEAIVVILDVGSTMNKNLGNDDENGETRFQTALESVKMLFEQKLLYAAGHEIGIVLINT 61
Query: 53 EETENELTKEVGG-YEHVKVLQDIKVVDGHLVQSLKHLPQGTC--------AGDY----- 98
+E+ N L Y+HV +DI +D ++S + L Q C GD
Sbjct: 62 KESSNALNDAYSDQYKHVTTYRDIYKLD---LESFRQLEQIQCEKAPIKDNGGDLLDGLI 118
Query: 99 ----MLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMK--- 151
ML++ GE K KK + LITD G +E Q Q V + +
Sbjct: 119 VGMDMLVRHCGER-KVKKRVFLITD----------GERETQYDQKELQQVIQTINERDAR 167
Query: 152 -NIVV----------------------RASLSGEPH-MRVIIENDNLLNIFSKKSSAKTL 187
N++ + L +P+ + +N L+ ++K
Sbjct: 168 LNVITLDFCDDLAEDEDEDEEDEDQSKKKQLKMQPNETKAQFKNKKFLSELTEKVKGAIF 227
Query: 188 FVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPS 247
+ K R++ T +RG+L++S+ K+ V +Y +T EE FPTLKK+S A
Sbjct: 228 PAKVAIEIYQQFKKREVMARTKYRGNLDISKNCKLNVQIYSRTREEVFPTLKKHSLVADD 287
Query: 248 TDKFATHEVKVDYEYKSVEDPSKV-VPPEQRIKGYRYGPQVVPISSAEWEAVKFKP---- 302
+ VKV+ + ++DP ++ VPP+Q+IK + YG Q+VP++ +K+KP
Sbjct: 288 SKNAKEGLVKVERQLAEIDDPDQIAVPPDQQIKAFNYGKQLVPVAKENEHVLKYKPTKEG 347
Query: 303 ----------------------EKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATV 340
EK KLLGFTD S + RH+++ V++ + G S+
Sbjct: 348 EEETPSNEYVDDKDIKLQSSDYEKEFKLLGFTDQSKVPRHHFIAGVDVVLPVRG-SKNER 406
Query: 341 AVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVR 400
A +AL AM E ++V I R + R+ +V VL P++S+K + Y LP E++R
Sbjct: 407 AFAALVYAMIETHRVLIARIIERKNADPKLV-VLYPHISKKKPL---LYMAQLPTNEEIR 462
Query: 401 EFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLA-----PSGKGEILQPELTPNPALERF 455
++QFPS P S Q++AA L+K LDL P + E L+P+LT NPAL+ F
Sbjct: 463 DYQFPSL--VPAS----RDQKQAAKELIKALDLTKDVNEPEVEEEKLKPDLTFNPALQYF 516
Query: 456 YHHLELKSEH-QDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKST 514
+ + H ++ P L+ ++ + +PD L +Q + AF F ++ N + +
Sbjct: 517 SQVVVHRITHPEEQELPELNQAIAEYVKPDKELFTHAQEEVSAFEEAFKLEHNNEDENKK 576
Query: 515 RRFL-------REKPSGSDEPNG---DGSVSDA---QAVNSMESKPV-VTVDKIGDLTPI 560
R+ + RE+ ++E + S++ Q + E K V +IG + PI
Sbjct: 577 RKRIYWRDIIQREEIKAAEEQKQMEEEASIARMKLDQKGDGFEFKDNDGAVKEIGSVNPI 636
Query: 561 QDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEP 620
+DF+ M++ R D V AI+ MK+ I L+ NS G Y KA+E L +LR+ CI E E
Sbjct: 637 EDFKKMVTDRKV-DRVGTAIDQMKDMITKLVNNSLNGDLYHKAIECLASLREACITEDEA 695
Query: 621 KQFNDVLEKVCKICRKRNFSTFFDFLMSKKLSLISKSE-AVDSDITDDEAGSFIVKSQP 678
++FN +E++ K + FFD ++ +K+SLI+K E ++ S IT +EA F++ P
Sbjct: 696 QKFNLFMEQLKKRYTSGSNKGFFDMIVHEKISLITKDESSISSTITTEEARQFLMMDAP 754
>gi|66808247|ref|XP_637846.1| ATP-dependent DNA helicase [Dictyostelium discoideum AX4]
gi|74853480|sp|Q54LY5.1|XRCC5_DICDI RecName: Full=X-ray repair cross-complementing protein 5; AltName:
Full=ATP-dependent DNA helicase 2 subunit ku80
gi|60466265|gb|EAL64327.1| ATP-dependent DNA helicase [Dictyostelium discoideum AX4]
Length = 796
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 207/772 (26%), Positives = 366/772 (47%), Gaps = 110/772 (14%)
Query: 5 REALLLLLDVSPSMHS-----------VLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTE 53
+EA++++LD+ M S + D + + L Q+KLIYGK ++G++L GT+
Sbjct: 8 KEAVVVILDIGLGMTSKDSDGTTTTTSSIEDALRSVTLLYQQKLIYGKKDQLGLVLIGTK 67
Query: 54 ETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDY---------MLIKKY 104
T+N L + GY+H+ V+ DI+ ++ L++L G GD MLI+K
Sbjct: 68 GTKNNLQDD--GYQHITVVSDIEEPSIETLKYLENLAPGESKGDVIDSLIVAMDMLIRK- 124
Query: 105 GETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASL---SG 161
E K +K + L+T+A P+ D+ DQ I ++ G+ + ++ +
Sbjct: 125 TENKKYQKRIFLVTNARDPINTEDLSIVRDQFKKIDVKLNIIGVDFLEEIEENNMDTSNN 184
Query: 162 EPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMK 221
+ + +N+ L F++ + V + +++ + T FRG LE++ ++K
Sbjct: 185 NKNKSLKEKNEIFLREFAESVDGVLVPVKQALEMMSFFRSQSVMTRTSFRGALEITPELK 244
Query: 222 IKVWVYKKTGEEKFPTLKKYSDKAPSTDKFA--------------------------THE 255
I VW Y K ++ P+LKK S A + T +
Sbjct: 245 IPVWGYLKMKQQLLPSLKKISSIAQQQIEQQQQQQQQQNKNKNNEDNEDNEEGKPNITLD 304
Query: 256 VKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDAS 315
V + Y S+ DP + +KGY+YG ++P S + + +K+ K +K++GFTD
Sbjct: 305 VNQEVSYYSITDPDNEILKPDLLKGYKYGKSLIPFSKIDEDQLKYSSSKCLKVVGFTDRK 364
Query: 316 NILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLT 375
+I +Y M + +F+++PG+ ++ A+S+ A+ E ++V +VR V + S +G +
Sbjct: 365 SIPIYYNMGNTEVFVSQPGDKQSEEALSSFIHALVETDQVMVVRYV-KTMNGSPYLGYMI 423
Query: 376 PNV-SEKINIPDSFYFNVLPFAEDVREFQFPSFS-KFPVSWQ---PNEQQQEAADNLVKM 430
P+V S+ + Y+N LP A+D+R++QFP S K P++ + PN +Q EA L+
Sbjct: 424 PHVKSDYV----CLYYNHLPLADDIRQYQFPPISPKNPLTRKSNIPNAEQLEATQQLIDS 479
Query: 431 LDLAPSGKGE------ILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPD 484
+DL S E +L+P T NP L+ FY L +S H + P LD + + PD
Sbjct: 480 MDLMKSEFDEDGDPIQMLKPRFTYNPLLQHFYQCLHHRSLHPNTQIPKLDPIIAEYINPD 539
Query: 485 PTLLAESQSAIDAFCGQF------VIKENPKLKKSTRR---------------------- 516
++ +S+ +I F +F V + P +
Sbjct: 540 QIIMNKSKQSIKNFADKFPLTKTTVFSKTPAISGGNTNGTTSNTNNTMIGGVKYHWKDGM 599
Query: 517 FLREKPSGSDEPNGDGSVSDAQAVN-----SMESKPVVTVDKIGDLTPIQDFEAMMSRRD 571
+ E+ + DGS + + VN S++ V ++G + P+Q+F+ M++RRD
Sbjct: 600 LIGEEINLDSYVTDDGSEAKKRKVNDFSEFSLDKLVSGYVTEVGTINPVQNFKDMLNRRD 659
Query: 572 CPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVC 631
D VDKAI MK +I L+ +S Y KA E + LR GCI E E +QFN L+ +
Sbjct: 660 M-DLVDKAITLMKERILQLVNDSLRDQYYQKAFECIKELRVGCIRESEAEQFNGFLKDMR 718
Query: 632 KICRKRNFSTFFDFLMS--------KKLSLISKSEAVDSDITDDEAGSFIVK 675
+ + + F+ ++ + K ++LI++ E S++T +E F+ K
Sbjct: 719 SLFQSKKRDDFWQYITADVTSILGEKSINLITQDECDSSEVTQEELDQFLDK 770
>gi|290979382|ref|XP_002672413.1| Ku70/Ku80 beta-barrel domain-containing protein [Naegleria gruberi]
gi|284085989|gb|EFC39669.1| Ku70/Ku80 beta-barrel domain-containing protein [Naegleria gruberi]
Length = 773
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 212/758 (27%), Positives = 359/758 (47%), Gaps = 105/758 (13%)
Query: 4 TREALLLLLDVSPSMHSVLPD----VEKLCSRLIQKKLIYGKNHEVGVILFGTEETENEL 59
+EAL+++ DV S+ + D ++ + LI+ K+ Y EVG +L GT++T+N L
Sbjct: 11 AKEALVIIFDVGKSLGTRSRDEFEKAKRAITLLIKMKMRYSPKDEVGFVLVGTKKTKNHL 70
Query: 60 TKEVGG-YEHVKVLQDI--------KVVDGHLVQSLKHLPQG------TCAGDYMLIKKY 104
E G YE++ + Q I K+VD + ++ P+G A D +IK
Sbjct: 71 NDEYEGEYENIYIEQAIDTVSLDLFKIVDSINIDTIGMSPEGDLFDAVIVATD--MIKDR 128
Query: 105 GETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPH 164
K K + +++DA G E V R+ + G+R +++ V +
Sbjct: 129 CGKRKYAKRIVIVSDA---------GGTEISVDNDTRENIYQGMRNQDVKVNVIGLDFVN 179
Query: 165 MRVIIENDN--------------LLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIF 210
V +E+DN L K + + K++ + T F
Sbjct: 180 TEVKLEDDNGKIVGKTPKLRNEIFLCDMCKNVGGIVIPIQQAIDTLLLFKSKKVLSRTTF 239
Query: 211 RGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSK 270
RG+L+++ +KI VWVYKKT + PT K+ S + + +V+++ Y S +DP
Sbjct: 240 RGNLDIAGNIKIPVWVYKKTEKTSLPTAKRLSLVSRRANTGGDGDVQMERCYYSYDDPDN 299
Query: 271 VVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFI 330
+ ++ +K Y+YG VP + +A+K+K K + +LGFTD NI R ++M + FI
Sbjct: 300 QIEKDKTVKAYKYGKNFVPFNIVNEKALKYKSSKGITVLGFTDEKNIDRSHFMAETYSFI 359
Query: 331 AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYF 390
A+P + A +A+S+ RA+ E+ V I+ V+R + +G L P++ + YF
Sbjct: 360 AKPDDPFAQIALSSFIRALSELEMVMIITYVYRDDLEP-KLGFLYPHIGTN---SECLYF 415
Query: 391 NVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSG------KGEILQP 444
N LPFAED+RE+ F SFS + + +E+Q +AA++L+K +DL + K E ++P
Sbjct: 416 NALPFAEDIREYPFKSFS----TVKHSEEQLQAAEDLIKSMDLMDADEDENGEKSEAMKP 471
Query: 445 ELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPT-------LLAESQSAIDA 497
NP ++ FY L +++ + PP++ + K P+ L+ +++
Sbjct: 472 TCIYNPLVQHFYDCLHVRALKPNDPLPPVEPLITKFCYPEMNPESFYYKLMEKTKEHRLK 531
Query: 498 FCGQFVIKE---NPKLKKSTRRF-LREKPSGSDEPNGDGSVSDAQAVNSMESKPVVTV-- 551
F F KE + KL K F + E D N + + Q +ES V V
Sbjct: 532 FKSLFPTKEVEADSKLGKRKYWFAMGENEITLDSYNLEEVAENVQGTALLESDHVGQVVK 591
Query: 552 -------DKIGD-------------------------LTPIQDFEAMMSRRDCPDWVDKA 579
D + D P +DF M++R+D D VDKA
Sbjct: 592 RLKDGAYDGMSDAQFNEVQQRVGLNNLFMEQANSVKTTNPTKDFSEMLNRKDV-DMVDKA 650
Query: 580 IEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNF 639
I++M+ IF L+ +S E Y K + + LR+GCI E EP QFN+ L+K+ + K
Sbjct: 651 IQEMQVVIFKLVNDSIEDQYYEKVLACIKTLREGCIREAEPNQFNNFLKKLKQSYSKGKR 710
Query: 640 STFF-DFLMSKKLSLISKSEAVDSDITDDEAGSFIVKS 676
F+ F++ +SLI++ E +S++T+DEA F+ ++
Sbjct: 711 EDFWCSFIVQNNISLITQDECDESEVTEDEAKKFLTEA 748
>gi|348676446|gb|EGZ16264.1| hypothetical protein PHYSODRAFT_316299 [Phytophthora sojae]
Length = 770
Score = 229 bits (583), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 206/758 (27%), Positives = 342/758 (45%), Gaps = 106/758 (13%)
Query: 1 MARTREALLLLLDVSPSMHSVL-------------PDVEKLCSR----------LIQKKL 37
M+R +EA+++LLDV SM L P E +R ++Q+KL
Sbjct: 1 MSRAKEAVVVLLDVGASMRVPLRERVAASDKNRQDPGDELQHTRFAASIAAVEGVVQQKL 60
Query: 38 IYGKNHEVGVILFGTEETENELTKEVGG--YEHVKVLQDIKVVDGHLVQSLKHLPQG--- 92
+ EVG++ +G+E+T+N+L +E G Y +V+V+ I H+++ L+ L
Sbjct: 61 FFKPKDEVGIVAYGSEDTDNQLNEEQGESEYRNVQVVNSIDSPTLHMIKRLRELKPSRSE 120
Query: 93 ----------TCAGDYMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQ 142
A D + + G+ Y K L +ITDA + D G E V+ I
Sbjct: 121 DTKVDILDGLIVALDLLFRRTDGKKYD--KRLMVITDAAAKI--ADAGDLESVVTMIQNM 176
Query: 143 MV---AFGLRMKNIVVR-------------ASLSGEPHM-------RVIIENDNLLNIFS 179
V GL ++ ++ A++ EP R+ EN+ +L +
Sbjct: 177 EVKLQVIGLDFQHTTIKPQKDKEGDEEMPEANVKDEPDAGGAPGPERIKAENEKMLVSIA 236
Query: 180 KKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLK 239
+ + V L + ++ T FRG LE + + I V+ Y KT PTL
Sbjct: 237 NEVGGEVCSVSKRMHLLAQGMKKTVALTTKFRGPLEFGDALGIPVYCYLKTKTATLPTLS 296
Query: 240 KYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVK 299
K S S +K A +VK+D Y S ++ + VPP+Q++K YRYG + VP +SA+ E K
Sbjct: 297 KESQS--SYEKEAAGKVKLDRRYTSPQNIDEEVPPDQQVKAYRYGAEKVPFASADVEFFK 354
Query: 300 FKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVR 359
F+ EKS+K+LGF D + I ++ ++F+AEPG A +AL AM E+++V + R
Sbjct: 355 FQTEKSLKVLGFLDKAQINHAKFVAGTDIFVAEPGKPHAATCFAALIDAMVELDQVIVAR 414
Query: 360 CVWRQGQQSVVVGVL--TPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPN 417
V R+ +V ++ P+ + N + + LP+ EDVR ++F + P
Sbjct: 415 FVARKNAAPKIVALIPHAPSSGQGENYY-AMWSQQLPYEEDVRNYEFAPLKS--RKYTPT 471
Query: 418 EQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSL 477
+ QQ AD LV L + E+ NP + RF+H + +++ + A P L +
Sbjct: 472 DGQQALADKLVDSLSIRDDKADEV---GACFNPVIRRFFHAVSMRALDESAGVPALPSYM 528
Query: 478 KKITEPDPTLLAESQSAIDAFCGQFVIKE--NPKLKKSTRRFLREKPSGS---------- 525
+ + DP + S I+ F F +KE + + F + P+ S
Sbjct: 529 EASLKMDPARQEKISSLIENFGDAFQLKEAVKKAKDRKKKSFWSDVPAASVKEEDLKEEH 588
Query: 526 -DEPNGD--GSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMM-------SRRDCPDW 575
D GD GS + ++S V +V G + PI DFE ++ SRR
Sbjct: 589 DDAAGGDNAGSDLELDLDELLDSGDVTSV---GSMNPIADFEELVESSKSKASRR---QQ 642
Query: 576 VDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICR 635
+ A+ M+ +I L S YPKA++ L RK + Q QFN+ L K+ +
Sbjct: 643 LTTAVTGMETQIEKFLSQSGSEF-YPKALQCLTHFRKRSVEIQYSSQFNEFLTKLKTVLT 701
Query: 636 KRNFSTFFDFLMSKKLSLISKSEAVDSDITDDEAGSFI 673
+ S + + S +SL++ ++ D++ EA +F+
Sbjct: 702 ED--SDAWKAVKSADISLLTSADDPSVDVSAAEARAFL 737
>gi|443717141|gb|ELU08335.1| hypothetical protein CAPTEDRAFT_163248 [Capitella teleta]
Length = 723
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 192/722 (26%), Positives = 339/722 (46%), Gaps = 74/722 (10%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDV-----EKLCS--RLIQKKLIYGKNHEVGVILFGTE 53
MA +EA+ ++LDV P M+ P E + + ++Q+KL EV +IL GT
Sbjct: 1 MAANKEAIAIVLDVGPGMNQAPPGCTTPIEESITAIQMILQRKLFSESKDEVALILLGTP 60
Query: 54 ETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKH-----------LPQGTCAGDYMLIK 102
T NEL + G Y ++ + + I VD L+Q +++ + A D+++
Sbjct: 61 NTANELADDDGNYANITLAKPIGPVDWQLLQYVQNDIHPSSFSADFISAVVVAMDHIVKG 120
Query: 103 KYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAF---GLRMKNIVVRASL 159
G+ K + L ++ D + ++ V ++ Q + F G M +
Sbjct: 121 TSGKKGFASKRIILFSNLCGEFGDDHL---DNIVGSLKGQDIEFDVIGPEMDDDDDDDGD 177
Query: 160 SGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTT-----SLRGA---------RKTRDIS 205
+ P +N + + A F+ T S R A R+ R
Sbjct: 178 NPRPGTSG--QNQKPKSTQQRAGEALVKFIQETVEGCSYSFREALAALSNYLSRQVRS-- 233
Query: 206 PVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPST--DKFATHEVKVDYEYK 263
T +R ++E+ ++KI + ++ + E K + K + P+ ++ H + D E
Sbjct: 234 --TAWRCNMEIGSELKIPINLFTRIKEAKAKSFKNVYARDPNAALERNRAHHLN-DAEET 290
Query: 264 SVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYM 323
+E E + G+RYG +VP S+ + EA+K++ EK K+ GFT + N+ HY M
Sbjct: 291 EIE-------REDTVDGHRYGSTLVPFSADDKEAMKYRSEKCFKVFGFTKSENVRTHYKM 343
Query: 324 KDVN-LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKI 382
D + +AE + A VA+SA A+ E N VAIVR V+ +V +G L P + +
Sbjct: 344 GDATWVCVAEKSDEAAAVALSAFINALYETNCVAIVRRVY-NNNGAVRIGALVPQIEAE- 401
Query: 383 NIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEA--------ADNLVKMLDLA 434
+ +N LPFAEDVR + SF PVS + Q++A D L+ +DL+
Sbjct: 402 --NECLIYNELPFAEDVRNY---SFGSLPVSETNSANQRQAPTDDQLSLMDELIDNMDLS 456
Query: 435 ---PSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAES 491
++L PE+T NP L+R + L+ ++ + D P L + +++ EP + +
Sbjct: 457 KVETDDDCQVLDPEVTFNPYLQRLFQCLQHRALNPDDPLPDLSEVVRRSLEPPVCVATQC 516
Query: 492 QSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNSMESKPVVTV 551
+S ++ ++ ++ K KK T + K +EP S+ +E V
Sbjct: 517 ESTVEKMKEKYSLQRVEKKKKETAENIFGKKDEDEEPACKKMKSEDDLNGGLEDIVKAKV 576
Query: 552 DKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALR 611
+++G + P++DF+A+++ +D D ++A MK ++ L+ +S YPKA+ + R
Sbjct: 577 EEVGTVNPVEDFKALLAWKD-KDMFEEACAMMKARVLQLVSDSFGTQLYPKAMNCIQTFR 635
Query: 612 KGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKKLSLISKSEAVDSDITDDEAGS 671
I EP+ FN+ L ++ I R++ S F+D L+ K++LISK E+ DS + +EA
Sbjct: 636 LEAIKAAEPRTFNNFLRELKDILREKGRSDFWDDLLKVKVTLISKLESEDSSVGQEEAQR 695
Query: 672 FI 673
F+
Sbjct: 696 FL 697
>gi|440800306|gb|ELR21345.1| ATPdependent DNA helicase [Acanthamoeba castellanii str. Neff]
Length = 753
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 200/723 (27%), Positives = 345/723 (47%), Gaps = 103/723 (14%)
Query: 2 ARTREALLLLLDVSPSMH-------------------------------SVLPDVEKLCS 30
A +REA++++LDV SM S L K
Sbjct: 3 AASREAVVVILDVGASMATQQRCSSSSSRPTMGASSSSAAAACASVSTTSGLEQAVKAVE 62
Query: 31 RLIQKKLIYGKNHEVGVILFGTE------------ETENELTKEVGGYEHVKVLQDIKVV 78
L+Q+KL++ E+G++LFGT ET N+L+++ GY+H+ V ++I
Sbjct: 63 LLVQQKLMHPSRDELGLVLFGTRGTCLLLIAIVITETHNQLSED--GYQHITVAREIMGA 120
Query: 79 DGHLVQSLKHL-PQGTCAGDYMLI-------KKYGETYKGKKHLCLITDALCPLKDPDVG 130
D L++ + + P+G D +++ K G+ Y+ K + L+TDA CP+ D+
Sbjct: 121 DIDLLRYISTITPEGADVIDALIVGMDLLIRKTAGKRYE--KRIFLVTDAGCPVNQDDLD 178
Query: 131 TKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIE--NDNLLNIFSKKSSAKTLF 188
+Q I ++ G+ + + + S + + + + N+ L+ F+++ +
Sbjct: 179 VVCEQFLKIDARLNVIGVGFEEDDDQRAGSQDDNDKAEFKRKNERLIREFAERVHGVVVP 238
Query: 189 VDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPST 248
V + K + + T RG LE+S +KI VW Y KT E K PTLKK S + +
Sbjct: 239 VQRAIEMMSFIKPKPVLQRTSHRGCLEISAHVKIPVWSYIKTMERKLPTLKKVSVVSQLS 298
Query: 249 DKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKL 308
E PS V P++++KGY+YG +VP S + +K++ K ++L
Sbjct: 299 VWGEEEEEGRQLNAPPSRYPS--VAPDEKVKGYKYGKTLVPFSMVDEAVLKYEAAKCLQL 356
Query: 309 LGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQS 368
+GFT A N+ RH ++ +V + EPG+ A A+SALA A+ E +AIVR V R + +
Sbjct: 357 IGFTSAKNVPRHQFLGNVECIVPEPGDGSAAAALSALAHALAETGSLAIVRYVKRN-KGN 415
Query: 369 VVVGVLTPNVSEKINIPD--SFYFNVLPFAEDVREFQFPSFSK-FPVSWQPNEQQQEAAD 425
+G L+P++ PD YF LPFAED+R++ F S ++ ++ P+E+Q EA
Sbjct: 416 PYLGCLSPHIK-----PDFACLYFCALPFAEDLRQYPFASLARPLRKAYAPSEEQLEATQ 470
Query: 426 NLVKMLDLAPSGKG------EILQPELTPNPALERFYHHLELKSEHQDA-APPPLDDSLK 478
L+ +DL + E ++P+ T NPAL+ Y + + +H D + PP+D +++
Sbjct: 471 ALIDSMDLMTAATDEDGNPMEAVKPKYTYNPALQNLYRAVLHRLQHPDEPSLPPVDPAIQ 530
Query: 479 KITEPDPTLLAESQSAIDAFCGQFVI-KENPKLKKSTRRFLREKPSGSD--------EPN 529
+ PD L + + A+D + F + K RR+ R++ + +D E
Sbjct: 531 EALRPDLGLADKLRPALDRYKAAFTFTRVEGAAAKVERRYWRDRLADTDVQLESYVPEAK 590
Query: 530 GDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFG 589
+ + + SMES +G + P QDF M++RRD D VDKA+E M+ +I
Sbjct: 591 KQRKNPEEEGI-SMESLMSGATSDVGPINPEQDFSDMLARRDV-DLVDKAVEQMQGRIKQ 648
Query: 590 LLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSK 649
L+E+S Y KA+ Q+N+ ++++ R + F+ L ++
Sbjct: 649 LVEDSVGTQLYDKAL-----------------QYNEFVDELEGYYRHKRRDDFWRLLCAR 691
Query: 650 KLS 652
L+
Sbjct: 692 GLN 694
>gi|301096669|ref|XP_002897431.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262107122|gb|EEY65174.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 767
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 205/755 (27%), Positives = 340/755 (45%), Gaps = 103/755 (13%)
Query: 1 MARTR------EALLLLLDVSPSM-----------------------HSVLPDVEKLCSR 31
M+RT+ EA+L+LLDV SM H+
Sbjct: 1 MSRTKVCVLVPEAVLVLLDVGASMRAPLRERVSVSDKNRQDTDNDLQHTRFAAALAAVEN 60
Query: 32 LIQKKLIYGKNHEVGVILFGTEETENELTKEVGG--YEHVKVLQDIKVVDGHLVQSLKHL 89
++Q+KL + EVG++ +G+E+T+N+L +E G Y +V+V+ I H+++ L+ L
Sbjct: 61 VVQQKLFFKPKDEVGIVAYGSEDTDNQLNEEQGQGEYRNVQVVNSIDSPTLHMIKRLREL 120
Query: 90 -PQGT------------CAGDYMLIKKYGETYKGKKHLCLITDALCPLKDP-DVGTKEDQ 135
P + A D + + G+ Y K L +ITDA + D D+ +
Sbjct: 121 KPSKSEETKVDILDGIIVALDLLFRRTDGKKYD--KRLLIITDAAAKIADAGDLESVVTM 178
Query: 136 VSTIARQMVAFGLRMKNI--------VVRASLSGEPHM-------RVIIENDNLLNIFSK 180
+ + Q+ GL ++ + S+ EP RV EN+ +L +
Sbjct: 179 MQNMEVQLQVIGLDFQHTTTAKKADEMAETSVKDEPMELATSGPDRVKAENEKMLVSIAN 238
Query: 181 KSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKK 240
+ + V L + ++ T FRG LE + + I ++ Y KT PTL K
Sbjct: 239 EVGGEVSSVSKRMQLLAQGMKKTVALTTKFRGPLEFGDTLAIPLYCYLKTKTATLPTLSK 298
Query: 241 YSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKF 300
S S +K +VK+D Y S ++ + VPP++++K YRYG + VP +SA+ E KF
Sbjct: 299 ESQN--SYEKETAGKVKLDRRYTSPQNVDQEVPPDEQVKAYRYGSEKVPFASADIEFFKF 356
Query: 301 KPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRC 360
+ EKS+K LGF D S + ++ ++FIAEPG A +AL AM E+++V I R
Sbjct: 357 QTEKSLKALGFLDRSQLNHSKFIAGTDVFIAEPGKPHAATCFAALIDAMVELDQVIIARF 416
Query: 361 VWRQGQQSVVVGVL--TPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNE 418
V R+ +V ++ P+ E + + LP+ EDVR ++F + P+
Sbjct: 417 VPRKNAAPKIVALIPHAPSSGENFY---AMWAQQLPYEEDVRNYEFAPLKT--RKYTPSS 471
Query: 419 QQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLK 478
+QQ AD LV L + E+ NP + RF+H + +++ + A P L L+
Sbjct: 472 EQQALADKLVDSLSIRDDKADEV---GACFNPVIRRFFHAVSMRALDESAGVPALPSYLE 528
Query: 479 KITEPDPTLLAESQSAIDAFCGQFVIKE--NPKLKKSTRRFLREKPSGS----------D 526
+ D + S I++F F +KE + + F + P+ S +
Sbjct: 529 SSLKMDSGRQEKISSLIESFGDAFQLKEAVKKAKDRKKKSFWSDVPTASIKEEDLKEENE 588
Query: 527 EPNGD-GSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAM-------MSRRDCPDWVDK 578
E GD GS + + ++S V +V G + PI DFEA+ +SRR +
Sbjct: 589 EATGDAGSDLELDLDDLLDSGDVTSV---GSMNPIADFEALIESSQSKLSRR---QQLTT 642
Query: 579 AIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRN 638
A+ M+ +I LL S +PKA++ L RK Q QFN+ L K+ + +
Sbjct: 643 AVTGMETQIEKLLSQSGSEF-FPKAMQCLSHFRKRSPEIQYSTQFNEFLTKLKTVLSED- 700
Query: 639 FSTFFDFLMSKKLSLISKSEAVDSDITDDEAGSFI 673
S + + + LIS +E D++ EA +F+
Sbjct: 701 -SEAWKTVKDADIGLISSTEDPSVDVSPAEARAFL 734
>gi|170181041|gb|ACB11497.1| KU80-like protein [Pinus sylvestris]
Length = 224
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 111/224 (49%), Positives = 154/224 (68%), Gaps = 9/224 (4%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR +E+L+LLLD+SPSMH+ L VE+ S L+++K+ + K+ EVG++LFG EE +N+L
Sbjct: 1 MARNKESLVLLLDISPSMHNHLHYVERAMSTLVRRKVYFSKSDEVGLVLFGAEEPDNDLQ 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDYM---------LIKKYGETYKGK 111
KEVGGYE+V V + IKVVD ++++L LP+G GD++ LIKK G+ KG
Sbjct: 61 KEVGGYENVVVFRPIKVVDEDILEALSRLPRGMAPGDFLDAIVVGMDLLIKKLGKGSKGN 120
Query: 112 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIEN 171
K LCLIT A +K+PD GTKEDQV IA QM G+++ +V R + G+ + EN
Sbjct: 121 KRLCLITGAQSFIKEPDEGTKEDQVDIIANQMKEHGMKLDVVVFRQRMPGQTKSELFSEN 180
Query: 172 DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLE 215
+LLN FS+++ A+ + V+S TSL GA K R+ISP TIFRGDLE
Sbjct: 181 LSLLNRFSRRTEAEVIVVESPTSLLGAVKVRNISPFTIFRGDLE 224
>gi|196014368|ref|XP_002117043.1| hypothetical protein TRIADDRAFT_61074 [Trichoplax adhaerens]
gi|190580265|gb|EDV20349.1| hypothetical protein TRIADDRAFT_61074 [Trichoplax adhaerens]
Length = 784
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 204/759 (26%), Positives = 341/759 (44%), Gaps = 137/759 (18%)
Query: 5 REALLLLLDVSPSM------HSVLPDVEKLCSRLIQKKLIYGKNH-----EVGVILFGTE 53
+EA+ + LDVSPSM H+ + +I + ++ + H E ++LFGT+
Sbjct: 26 QEAIAICLDVSPSMCYAPQGHASKLETSVNAINMIVSRKMFSQGHLANKDEFALVLFGTQ 85
Query: 54 ---------------------------ETENELTKEVGGYEHVKVLQDIKVVDGHLVQSL 86
E++N+L ++ G YE++ V++ + D + ++ +
Sbjct: 86 ARKRIDNYTACSTKNALSVIDIFVYCLESDNDLYED-GQYENISVVRPLGPPDLNFLRYI 144
Query: 87 KH-----LPQGTCAGDYMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIAR 141
+ L A D + G+ + G K + L +D P D DQ++
Sbjct: 145 QTNIAPVLDSIIVAMDLLKKSTSGKKF-GDKRIILFSDLGSPFAD-------DQIA---- 192
Query: 142 QMVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTT-SLRGARK 200
GE ++ I+E VD + SLR A
Sbjct: 193 -------------------GESTLKKILE-----------------IVDGDSHSLRSALS 216
Query: 201 T------RDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATH 254
T R I T+FRG LE+ K+KI + Y K E K + KK S + ++++
Sbjct: 217 TLSFFQKRSIKMTTVFRGPLEIGSKLKINTYAYIKVRESKPESWKKLSAISEASNQPGDM 276
Query: 255 EVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDA 314
+VK++ Y ++ + E KGY+YG +VP + E++K K K + +LGFT +
Sbjct: 277 KVKIERSYHLNDEDETEIERENLAKGYKYGKTIVPWLKIDEESMKLKAAKCLSVLGFTKS 336
Query: 315 SNILRHYYMKD-VNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGV 373
N+ RH+ M D V +F+ P + A VA SAL +A+ E +KVA+VR V+R Q +G+
Sbjct: 337 ENVKRHWLMGDGVVVFMPAPNDEPAGVAFSALVQALYETDKVAVVRYVYRNNSQP-KLGI 395
Query: 374 LTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDL 433
L P + S F LPF ED+R++ F S + + P + Q + D+LV +DL
Sbjct: 396 LFPQIKATYR---SLLFIQLPFMEDIRQYTFASLTTNKKN-VPTDDQLDLVDDLVTSMDL 451
Query: 434 APSGK---GEI---LQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTL 487
+ + + GE+ L+P+LT NP L+R Y ++ ++ + D A P D + + P +
Sbjct: 452 SRAYRDDDGELIEALKPKLTFNPVLQRSYQCIQHRALNPDDALPRPDPVITRYLSPSQDV 511
Query: 488 LAESQSAIDAFCGQFVIKENPKLK-----------KSTRRFLREKPSGSDEPNGDGSVSD 536
A S F I K K K E + S S +D
Sbjct: 512 TATCASHFQKIKDSFGIVHVQKKKKRDDGTAASIFKDNIDLALELDTSSKRAKDSNSTAD 571
Query: 537 AQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRD----------CPDWV---DKAIEDM 583
S SK VT ++G + P+QDF+AM++++D P+W A + M
Sbjct: 572 VDFSISSLSKENVT--EVGTVQPVQDFKAMINQKDEDRFEEGTDYRPNWYPMNTLACKQM 629
Query: 584 KNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFF 643
K++I+ L+ +S +PKA++ L ALR+ C+ EP FN L+ + F+
Sbjct: 630 KSRIWQLVMDSIGSQLFPKAMDCLKALREECVRLGEPAVFNQFLQDMKDKLSNAFGRDFW 689
Query: 644 DFLMSKKLSLISKSEAVDSDITDDEAGSFIVKSQPKHED 682
++ +++LIS E+ +SD+T +A SF+ + K ED
Sbjct: 690 LLVVEGEITLISVQESSESDVTVADAKSFLKSTDTKVED 728
>gi|145493174|ref|XP_001432583.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124399696|emb|CAK65186.1| unnamed protein product [Paramecium tetraurelia]
Length = 739
Score = 199 bits (505), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 198/748 (26%), Positives = 339/748 (45%), Gaps = 101/748 (13%)
Query: 5 REALLLLLDVSPSMHSVLPDVE-KLCSRL----------IQKKLIYGKNHEVGVILFGTE 53
+EA L+LLDV SM+ + K +RL IQ+K+ KNHEVG++LFGTE
Sbjct: 4 KEATLVLLDVGASMYEPYKQAQGKKITRLELAVDCIGMMIQQKIFNYKNHEVGLVLFGTE 63
Query: 54 ETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQG----TCAGDYM--------LI 101
+ E+ G +++ L D ++L LP GD +
Sbjct: 64 DAED------GNTFYIQTLSS---PDLEFYRNLTELPNHDIPKIIGGDIFDALDKSVSTL 114
Query: 102 KKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVR----- 156
+Y +T K K + ++T + E +++ + + + +++ I +
Sbjct: 115 DEYVKTKKMDKKIFVLTAGFGQTE-----YNEKKIAKLIKMIEKVDVKINFIALDFMNEY 169
Query: 157 -ASLS--GEPHMRVIIENDNLLNIFSK------------------KSSAKTLFVDSTTSL 195
A L +P + + ND +LN + +S + + L
Sbjct: 170 DAELDDPSKPENQETL-NDRMLNAVYESQEQSINSRLVYYMVQELRSHMRIFPANIAFEL 228
Query: 196 RGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHE 255
T+ + FRGD +++++ I V VYK+ EEK P+LKK+S + + +
Sbjct: 229 YSQFHTKQMQARASFRGDFQINDETSISVLVYKRCTEEKLPSLKKHSATGEFSSEPTRNV 288
Query: 256 VKVDYEYKSVEDPSKV-VPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDA 314
V+ D + + EDP+ + E IKGY YG ++P+ S + +K++ +S +LLGF D
Sbjct: 289 VRNDTIHYNPEDPNMTPIERENIIKGYLYGRSLIPVDSIMEDKMKYQCVRSFQLLGFVDK 348
Query: 315 SNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL 374
S I RHY+M V++ +A +A ++S+L A+ K+AI R V R+ +V VL
Sbjct: 349 SQIPRHYFMSSVDMVVA-IDCEKAKKSLSSLIIALIATKKIAIARFVGREKSSPKMV-VL 406
Query: 375 TPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLA 434
P+ S+ F+ LP +ED+R FQF + K QQ A +L+ +DL
Sbjct: 407 LPHKSKSYQ---CFWMIALPTSEDIRHFQFAALRK------STPHQQIAVASLIDKMDLE 457
Query: 435 --PSGKG---EILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLA 489
P+ G E+L+ + NP + F + K+ + PP+ + + P+ +
Sbjct: 458 ALPNESGEPEELLKMKYIANPTRQYFQQVVMHKAITRTDVIPPISPLILEYLHPEQRVYN 517
Query: 490 ESQSAIDAFCGQFVIKEN----PKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNSMES 545
+Q AI F K N P+ KK + L ++ + + + +N E
Sbjct: 518 YAQDAIQRVKNAFKFKVNEIKKPQDKKVFWKQLFDEQTTQQQQAQQQIEEEVVEINREEE 577
Query: 546 KPVV------------TVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLEN 593
+ V + +IG + PI DF+ M++ + D VD A++ ++ I GL++
Sbjct: 578 EMVNMFAKQKLGFNDDIIQEIGSVDPISDFKKMITEKRV-DLVDSALQQIQKVIIGLVDQ 636
Query: 594 SNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKKLSL 653
S +G +PKA+E L +R+ CI E E FN L + K N S F+ ++ + ++L
Sbjct: 637 SVKGSFFPKALECLKEMRRACISEDEAPVFNKFL---FVLKDKYNQSIFWAQIVQQGITL 693
Query: 654 ISKSEAVDSDITDDEAGSFIVKSQPKHE 681
IS E S +T +EA F+ K KH+
Sbjct: 694 ISNIENQKSGVTAEEAQDFLNKEDNKHQ 721
>gi|281203244|gb|EFA77444.1| ATP-dependent DNA helicase [Polysphondylium pallidum PN500]
Length = 699
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 188/716 (26%), Positives = 321/716 (44%), Gaps = 98/716 (13%)
Query: 4 TREALLLLLDVSPSMH---------SVLPDVEKL--CSRLIQKKLIYGKNHEVGVILFGT 52
T+EAL+++LD+ MH + P E L + L Q+KL+YGK E+GV+L GT
Sbjct: 8 TKEALVVILDIGLGMHQHSNTNKQYTTTPIEEALKSATLLYQQKLLYGKKDELGVVLIGT 67
Query: 53 EETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDY---------MLIKK 103
+ET+N L K+ GY H+ +I+ ++ L+ L G GD MLI K
Sbjct: 68 KETKNNLQKD--GYHHITTQTEIEEPTLETLKFLEQLKPGQSRGDIIDALIVAMDMLIHK 125
Query: 104 YGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEP 163
+ K +K + L+T+ P+ D+ T DQ I ++ G+ + L +
Sbjct: 126 TAKK-KYQKRIFLVTNCYDPINKDDLSTLRDQFKKIDVKLNIIGVDFTD---EEELENKI 181
Query: 164 HMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIK 223
+ EN+ L F++ + V + +++ + T+FR
Sbjct: 182 KLTKKEENEKFLREFAESVDGVLVPVKQALEMMSFFRSQSVLQRTVFRD---------TG 232
Query: 224 VWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRY 283
V VY+ E ++D D AT + + R +
Sbjct: 233 VVVYEDKDSE-------FTDAWKGVDSGATAKGRA-----------------TRCQNNNR 268
Query: 284 GPQVVPISSAEWEAVKF--KPEKSVKLLGFTDASNILRHYYMK-DVNLFIAEPGNSRATV 340
G EA+ F + V L T+ + Y+ K + ++ PG+ A
Sbjct: 269 G--------QTGEALLFDKRSRYRVGLFRVTERIQKVPIYHNKGSTEMMVSPPGDKVARS 320
Query: 341 AVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVR 400
A+S+L M E + + R V R G S + +L P++ K N +S Y LPF +D++
Sbjct: 321 ALSSLIHGMAETKQALLARYVKRNGS-SPSIALLYPHI--KANY-ESLYVCQLPFLDDLK 376
Query: 401 EFQFPSFS-KFPVS---WQPNEQQQEAADNLVKMLDLAPSGKGE------ILQPELTPNP 450
++QFP + P + + P +Q +AA L+ +DL + + E L+P T NP
Sbjct: 377 QYQFPPIAPTNPATRKPYIPTAEQVDAARALIDSMDLMTAEEDEDHQKIAALRPRFTYNP 436
Query: 451 ALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKL 510
+L+ FY L ++ H ++ P LD + K PD ++ +Q AI F F + +
Sbjct: 437 SLQHFYQCLHHRALHPESQLPKLDPIISKYINPDEAIMENAQDAIKNFQILFPLTKTTNF 496
Query: 511 KKS------------TRRFLREKPSGSDEPNGDGSV-SDAQAVNSMESKPVVTVDKIGDL 557
K ++ +R +D+ N +D A S++ V+++G +
Sbjct: 497 KSEPKYRWQDGMLVEQQQEIRLDSYVTDDTNSSKKRKADDLADYSLDKLVSGYVNEVGSI 556
Query: 558 TPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILE 617
P+Q+F+ M++RRD D VDKAI MK +I L+ +S + Y KA+E +VALR+G I E
Sbjct: 557 NPVQNFKDMLARRDI-DLVDKAISLMKQRIVQLVNDSLKDQFYQKALECVVALRRGSIKE 615
Query: 618 QEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKKLSLISKSEAVDSDITDDEAGSFI 673
E FN L ++ + F+ +++ ++ LI+ E+ DS+IT+ E+ F+
Sbjct: 616 SESLVFNQFLRELRDYYESKKRDDFWQLIVTNQIGLITNDESDDSEITEKESKEFL 671
>gi|145495442|ref|XP_001433714.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400833|emb|CAK66317.1| unnamed protein product [Paramecium tetraurelia]
Length = 738
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 207/744 (27%), Positives = 345/744 (46%), Gaps = 94/744 (12%)
Query: 5 REALLLLLDVSPSMHSVLPDVE-KLCSRL----------IQKKLIYGKNHEVGVILFGTE 53
+EA L+LLDV SM+ + K +RL IQ+K+ KNHEVG++LFGTE
Sbjct: 4 KEATLVLLDVGASMYEPYKQAQGKNITRLELAVDCIGMMIQQKIFNYKNHEVGLVLFGTE 63
Query: 54 ETE--NELTKEVGGYEHVKVLQDIKVVDGHLVQSLK------HLPQGTCAGD-------- 97
E E N +V ++ +++ + H V +K L + D
Sbjct: 64 EAEDGNTFYIQVMSPPDLEFYRNLTELPNHDVPKIKGGDIFDALDKAVSTLDEYVKAKKM 123
Query: 98 ----YMLIKKYGET-YKGKKHLCLITD-----------ALCPLKDPDVGTKEDQVSTIAR 141
++L +G+T Y KK LI A+ + + DV + T
Sbjct: 124 EKKIFVLTAGFGQTDYNEKKIGKLIKMIEKVDVKINFIAMDFMNEYDVELDD---PTKPE 180
Query: 142 QMVAFGLRMKNIVVR---ASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGA 198
RM N V + S++ +++ E N + IF + A L+ T A
Sbjct: 181 NQATLNDRMLNAVYQHQEQSINSRLIYQMVQELRNHMRIFPA-NIAFELYSQFHTKQMQA 239
Query: 199 RKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKV 258
R + FRGD +++++ I+V +YK+ E++ P+LKK+S + + + V+
Sbjct: 240 RAS--------FRGDFQINDETSIQVLIYKRCAEDRLPSLKKHSAIGEYSSEPTRNIVRN 291
Query: 259 DYEYKSVEDPS-KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI 317
D + + EDP+ + E IKGY+YG ++P+ S E +K++ +S +LLGF + S I
Sbjct: 292 DSIHYNPEDPNMNPIERENIIKGYQYGRNLIPVDSLMEEKMKYQCNRSFQLLGFVERSQI 351
Query: 318 LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPN 377
RHY++ +V++ IA +A ++SAL A+ KVAI R V RQ + S + +L P+
Sbjct: 352 PRHYFIFNVDMVIA-IDCEKARKSLSALIIALIATKKVAIARFVGRQ-KSSPKLMLLLPH 409
Query: 378 VSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDL--AP 435
S+ F+ LP +ED+R FQF + K PN QQ A L+ ++L P
Sbjct: 410 KSKSYQ---CFWMISLPTSEDIRHFQFSTLRK----STPN--QQSAVATLIDKMNLETIP 460
Query: 436 SGKG---EILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQ 492
+ G E+L+ + NP + F + K+ + PP+ + P+ + +Q
Sbjct: 461 NESGEPEELLKMKYIANPTRQYFQQVVMHKAITRTDVIPPISPLILDYLHPERRVYNYAQ 520
Query: 493 SAIDAFCGQFVIKEN----PKLKKSTRRFL-------REKPSGSDEPNGDGSVSDAQAVN 541
AI F K N P+ KK + L ++ P +E + + + + VN
Sbjct: 521 DAIQRVKNAFKFKVNDIKKPQDKKVFWKQLFDEQTAQQQVPEQIEEEIVEINREEEEMVN 580
Query: 542 SMESKPVV----TVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEG 597
+ + +IG + PI DF+ M++ + D VD A++ ++ I L++ S +G
Sbjct: 581 MFAKQKFGFNDDIIQEIGSVDPISDFKKMITEKRV-DLVDSALQQIQKVINALVDQSVKG 639
Query: 598 INYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKKLSLISKS 657
+PKA+E L +RK CI E E FN L + K N F+ ++ + ++LIS
Sbjct: 640 SFFPKALECLKEMRKACISEDEAPVFNKFL---FVLKDKYNQQLFWAQIVQQGITLISDI 696
Query: 658 EAVDSDITDDEAGSFIVKSQPKHE 681
E S +T +EA F+ K KH+
Sbjct: 697 ENHKSSVTAEEAQDFLNKEDNKHQ 720
>gi|260786747|ref|XP_002588418.1| hypothetical protein BRAFLDRAFT_164247 [Branchiostoma floridae]
gi|229273580|gb|EEN44429.1| hypothetical protein BRAFLDRAFT_164247 [Branchiostoma floridae]
Length = 716
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 193/725 (26%), Positives = 342/725 (47%), Gaps = 91/725 (12%)
Query: 7 ALLLLLDVSPSMHSVLP-------DVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENEL 59
A++L++DV P M P + + S L+Q+K+ EV +IL GT+ET NEL
Sbjct: 1 AMVLVVDVGPLMAQAPPGHVTPLENAKDAISMLLQRKMFSQSKDEVALILLGTQETANEL 60
Query: 60 T-KEVGGYEHVKVLQDIKVVDGHLVQSLKH-LPQGTCAGDYM--------LIKK--YGET 107
+ Y ++ V + + D L++ +K+ + G + D++ L++ G+
Sbjct: 61 AGTDDESYLNITVARPLGQPDFDLLEFVKNDIVPGPVSADFVDAIVVALDLVRNQTMGKK 120
Query: 108 YKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASL-------- 159
++ K+ + L ++ D + + + + + GL + + +
Sbjct: 121 FETKR-IVLFSNLAGEFTDDQLEGVINGMKALECEFNLIGLSLDDDDEDGDMPDQNGAGP 179
Query: 160 ----------SGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTI 209
+G +R +IE + + +S++S+ + L ++R A P +
Sbjct: 180 PRKERTPQQRAGTALIRHVIEEVDGV-AYSERSALQMLSFFQKRNVRAA-------PWKV 231
Query: 210 FRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKF-ATHEVKVDYEYKSVEDP 268
LE+ +KI V + + E K + KK + S D THE +++ + ++
Sbjct: 232 M---LEVGTNLKIPVRGFIRVKECKPNSFKKVHARTLSKDDIHTTHEHRLNDDEET---- 284
Query: 269 SKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNILRHYYMKD-V 326
P E I GYRYG +VP S+ + +KFK + K +LGFT A N+ R YYM D V
Sbjct: 285 ----PVESTIDGYRYGNTIVPFSTDDESQMKFKTDAKCFDVLGFTRADNVKRQYYMGDSV 340
Query: 327 NLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD 386
F+AE G+ A VA+SA A+ E N VAIVR V+ + + V LTP++ +
Sbjct: 341 RCFVAEEGDEPAAVALSAFIHALYETNMVAIVRYVYNK-NSAPKVAFLTPHIKPNY---E 396
Query: 387 SFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGE------ 440
+LPF ED+R++ F S + QP++ Q A D+L+ ++L K E
Sbjct: 397 CLLCIMLPFMEDMRKYTFSSLHPNNKN-QPSDDQLSAVDDLIDNMNLVMPDKDEDGKQQQ 455
Query: 441 ILQPELTPNPALERFYHHLELKSEH-QDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFC 499
L+P+LT NP L+R Y L ++ + D PP + ++ +P LL ++Q +D
Sbjct: 456 YLKPKLTFNPHLQRLYQCLSARALNPDDPQLPPPNQTILNYLQPQQDLLTQAQPCVDKIK 515
Query: 500 GQFVIKENPKLKKSTR-----------RFLREKPSGSDEPNGDGSVSDAQAVNSMESKPV 548
F ++ K K+ T +KP + GDG ++ A + PV
Sbjct: 516 AAFPLEVVTKKKEETTAQNIFGGGDDAEPAAKKPRLDTDAGGDGGLTMA----GLAQGPV 571
Query: 549 VTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLV 608
++G + P++DF AM+SR+D +++ + + ++ +I ++ S Y KA+E L+
Sbjct: 572 T---EVGSVRPLEDFRAMISRKDDDKFMEASAQ-LQKRIEEIVMESFGDQFYGKAMECLL 627
Query: 609 ALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKKLSLISKSEAVDSDITDDE 668
ALRK EP QFN L + + F+D ++ +K++LIS E+ ++ ++ +E
Sbjct: 628 ALRKESAKLGEPDQFNTFLRGFKETLFNKGRKDFWDCMVREKVTLISSEESSETSVSKEE 687
Query: 669 AGSFI 673
AG F+
Sbjct: 688 AGKFL 692
>gi|340374936|ref|XP_003385993.1| PREDICTED: x-ray repair cross-complementing protein 5-like
[Amphimedon queenslandica]
Length = 878
Score = 189 bits (480), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 186/733 (25%), Positives = 330/733 (45%), Gaps = 101/733 (13%)
Query: 5 REALLLLLDVSPSM--------------HSVLPDVEKLCSRLIQKKLIYGKNHEVGVILF 50
++ ++LL+DV P M H+ L K+ +++ +K+ G EVGV+LF
Sbjct: 6 KDFIILLIDVGPEMGDVPLSVGGAGGDDHTHLESALKIAQQIVFQKIFSGSKDEVGVVLF 65
Query: 51 GTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKH-LPQGTCAGDYM---------L 100
GT +T+N L+ + GGY+++ + D+ L + LK + G D++ L
Sbjct: 66 GTADTDNHLSAD-GGYQNISSVWDVTTPTTELAKYLKEKVKCGPAPADFIDAIVVAIDIL 124
Query: 101 IKKYGETYK-GKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNI------ 153
+K K G+K + L TDA G +DQ+ I GL+ KNI
Sbjct: 125 VKVTSNKKKVGEKKIYLFTDA-------SSGCSDDQIKEIIE-----GLKSKNIDLVIIG 172
Query: 154 --------------VVRASLSGEPHMR-----------VIIENDNLLNIFSKKSSAKTLF 188
S+ G H R E + +L++ + + ++
Sbjct: 173 PTLPNSETEDDRNDDNDDSVPGPSHGRRPPAPHYKKTPAQEEGERVLSLLVSEGAGRSFS 232
Query: 189 VDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPST 248
++ T F G LE+ ++KI ++ K+ E+ T KK S + S+
Sbjct: 233 FHDAMNISSFISKNAKKQTTRFAGVLEIGPQLKIPCKIFTKSMHERPATWKKLSAISQSS 292
Query: 249 DKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKL 308
T + ++ Y ++ V IKGYRYG ++P+SS + + +K K + L
Sbjct: 293 ANPGTMAINLERSYHLQDEDETEVDLSDTIKGYRYGRSLIPVSSEDDDNMKLSASKCLSL 352
Query: 309 LGFTDASNILRHYYM-KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQ 367
LGFT + + + + V + IA P + + V++SA+ RA+ EM+ I R V+R
Sbjct: 353 LGFTSRNKVRQELLVGSSVQVLIANPDSEPSAVSLSAIIRALYEMDMAGIARYVFRN-NA 411
Query: 368 SVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNL 427
S + L P++ P+ LP+ ED+R+F F S S +P+++Q A D L
Sbjct: 412 SPRLCALVPHIK-----PNYEVGGTLPYMEDLRQFSFASLSH--PKLEPSDEQLTAVDEL 464
Query: 428 VKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTL 487
+ ++L + + NP +R + LE +S + D PPL+ +L++ P P L
Sbjct: 465 INNMEL-----DDDFNTKEIKNPLFQRTFQCLEHRSLNPDDPLPPLEPALERCLNPSPAL 519
Query: 488 LAESQSAIDAFCGQFVI-----KENPKL------KKSTRRFLREKPSG----SDEPNGDG 532
L++ S++ F + K K KKST L K +D P+
Sbjct: 520 LSQCSSSVLKVKKVFPLTRIDDKNKDKTAVTNVWKKSTDINLDAKDGAEGDDNDLPSSKR 579
Query: 533 SVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLE 592
S +D S+ S V+++G + P+ D++ M+ ++ D DKA + ++ IF L++
Sbjct: 580 SKTDETDF-SIASLAKGEVNEVGTVDPVGDYKKMI--QNNSDTFDKATKQLEEVIFRLIK 636
Query: 593 NSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKKLS 652
S + Y KA+ + +R I P FN+ L+++ + +S+F+D ++ + LS
Sbjct: 637 GSLGDVMYSKAMNCIRTMRAEAIQASAPAGFNEYLKRLKEELIGTRYSSFWDEMVKESLS 696
Query: 653 LISKSEAVDSDIT 665
LI+ SE S+++
Sbjct: 697 LITSSECDKSNVS 709
>gi|145481675|ref|XP_001426860.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124393937|emb|CAK59462.1| unnamed protein product [Paramecium tetraurelia]
Length = 737
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 188/746 (25%), Positives = 327/746 (43%), Gaps = 101/746 (13%)
Query: 5 REALLLLLDVSPSMHSVLPDV-EKLCSRL----------IQKKLIYGKNHEVGVILFGTE 53
+EA L+LLDV SM+ K SRL IQ+K+ KNHEVG+ILFGTE
Sbjct: 4 KEATLILLDVGASMYGQYQQGGSKKLSRLELAVDCLGLMIQQKIFNYKNHEVGLILFGTE 63
Query: 54 ETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQG----TCAGDYM--------LI 101
E + T +QD+ + D +++ LP GD +
Sbjct: 64 EAPDGKTL---------YIQDLSIPDLDFFRNISDLPNHDVGQQVGGDIFDALDKAVHAL 114
Query: 102 KKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVV------ 155
+ +T K +K + ++T A C D E Q++ + + + +++ I +
Sbjct: 115 DDHAKTKKMEKKIFILT-AGCGQTD----YSEKQITKLIKMIEKVDVKINFIALDFMNDY 169
Query: 156 -------------------RASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLR 196
+ S + + I L + +++ + + L
Sbjct: 170 NGDMDDPEKPEEFEALNNRMLTASYQCQEQSINSRYVFLMVQELRNNMRIFPANVAFELY 229
Query: 197 GARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEV 256
TR + FRGD ++++++ ++V +YK+ EE+ PTL+K+S + V
Sbjct: 230 SQFHTRSLQARASFRGDFQINDEISVQVLIYKRCFEERLPTLRKHSTLGEFQTDTNKNHV 289
Query: 257 KVDYEYKSVEDPSKV-VPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDAS 315
+ D Y + EDP+ + + I+GY+YG +VP+ + +K++ + +LLGF D S
Sbjct: 290 RNDLIYYNPEDPNMTPIEKDNIIRGYQYGRNLVPVDQIMEDKMKYQCPRQFQLLGFVDRS 349
Query: 316 NILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLT 375
+I R+YY V++ IA N + A++AL A+ KVA+ R V R+ ++ +L
Sbjct: 350 HIPRYYYTSTVDMVIA-VENQKQQKALAALVIALIATRKVALARFVGREKTAPKLI-MLL 407
Query: 376 PNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDL-- 433
P+ S+ F+ LP ED+R FQF + + S P QQ A ++ +DL
Sbjct: 408 PHKSKN---SQCFWMISLPTTEDIRHFQFAALKR---STPP---QQMAVSAMIDCMDLEK 458
Query: 434 APSGKG---EILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAE 490
P+ G E+L+ + NP + F + K+ + PP+ + + P+ +
Sbjct: 459 MPTEDGQFEELLKMKYVANPTRQYFQQVVMHKAITRSDVLPPISPLILEYLHPEKRVYDY 518
Query: 491 SQSAIDAFCGQFVIKENPKLKKSTRR-FLREKPSGSDEPNGDGSVSDAQAVNSMESKPVV 549
++ A+ F K N K+ ++ F ++ V D + E + +V
Sbjct: 519 AKEALQKVKAAFKFKINEIKKQGDKKVFWKQLFEDQSTEQIQQQVEDEVVEINQEEEEMV 578
Query: 550 T-------------VDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNE 596
V +IG + P DF M++ + D VD A++ ++ I ++ S +
Sbjct: 579 NMFAKQKLGFNDDIVKEIGTVDPTSDFRKMITEKRV-DLVDTALQQIQKVIIQFVDQSLK 637
Query: 597 GINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFS--TFFDFLMSKKLSLI 654
G YPKA+E L +RK CI E E FN L + K +S F+ ++ + ++LI
Sbjct: 638 GSFYPKALECLKEMRKACITEDEAPVFNKYLHVL-----KEKYSQLVFWAQIVQQGITLI 692
Query: 655 SKSEAVDSDITDDEAGSFIVKSQPKH 680
S E S ++ DEA F+ K H
Sbjct: 693 SNIENQKSHVSVDEAQEFLNKEDISH 718
>gi|405967549|gb|EKC32697.1| ATP-dependent DNA helicase 2 subunit 2 [Crassostrea gigas]
Length = 729
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 185/740 (25%), Positives = 334/740 (45%), Gaps = 101/740 (13%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEK-------LCSRLIQKKLIYGKNHEVGVILFGTE 53
MA +EA+ ++LDV PSM++ P E +IQ+K+ EV ++LFGT
Sbjct: 1 MAANKEAIAIVLDVGPSMNNAPPGEETPLQTAVDAIKMIIQRKMFSESKDEVSLVLFGTP 60
Query: 54 ETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKH--LPQGTCAG---------DYMLIK 102
+T+N L + Y+++ + + + VVD +Q +++ P T A D+++
Sbjct: 61 DTDNPLA-DGDSYDNITISRPLGVVDFDFLQQVQNDITPSNTSADFVDALVVALDHLVNA 119
Query: 103 KYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASL--- 159
G+ K L L++D D DQ+ I + G + I +L
Sbjct: 120 TQGKKGFAMKRLILLSDLGGEFGD-------DQIEAIISGIKNSGTELNVIGPDINLDGD 172
Query: 160 ---------------------------SGEPHMRVIIEN-DNLLNIFSKKSSAKTLFVDS 191
+GE ++ I+E + FS+ A + F
Sbjct: 173 EDDDDSQRPGPSGAANGHQKARTPQQKAGEGMLKRILEEVEGECYSFSEALPALSHF--- 229
Query: 192 TTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKY--SDKAPSTD 249
+ R + P T ++ LE++ ++I V Y K + K + KK D+ D
Sbjct: 230 --------QMRQVRP-TPWKVQLEITSNIRIPVCSYIKIKDFKVKSFKKVYAKDEDAEID 280
Query: 250 KFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLL 309
T Y ++ V E ++G+RYG +VP+S + +K+K EK +K L
Sbjct: 281 NLRT--------YHKNDEEETEVEKEDIVEGHRYGTTLVPMSEDDKLNMKYKAEKCLKAL 332
Query: 310 GFTDASNILRHYYMKD-VNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQS 368
GFTDA NI RH++M D + +A+ + A VA+SAL A+ E N +VR V+ +
Sbjct: 333 GFTDAQNIKRHHFMGDNTHYVVADKDDETAVVALSALINALYETNMAVVVRKVY-SAATA 391
Query: 369 VVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSF-----SKFPVSWQPNEQQQEA 423
+G L P++ + + LPF ED+R++ F S ++ ++P + Q +A
Sbjct: 392 PKLGCLLPHIKSSY---ECLIYVELPFREDIRQYTFGSLPLKQDTEANKKYRPTDAQLDA 448
Query: 424 ADNLVKMLDLAPSG------KGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSL 477
++L+ DL+ + K E L+P+L NP +R Y L+ ++ P L +
Sbjct: 449 INDLINESDLSQAAEDEDGEKTEALKPKLIFNPYFQRLYQCLQHRALEPHEPLPELSPMI 508
Query: 478 KKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLRE--KPSGSDEPNGDGSVS 535
P + A ++ + F ++ K+KK R+ K DEP+
Sbjct: 509 ANSLNPPQEVSARCEAQCEKLKNLFKLE---KVKKEDRKTGENMFKQKEEDEPSAKKIKM 565
Query: 536 DAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSN 595
D + V ++G +TP+ DF ++++++D D ++A M+ ++ L+ +S
Sbjct: 566 DDDLGGGLADITKAEVTEVGTVTPVDDFISLINQKDA-DKFEEASGQMQKRVEQLVTDSF 624
Query: 596 EGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKKLSLIS 655
Y KA++ L ALR+ I + EP +N+ ++K+ ++ F++ ++ K +LI+
Sbjct: 625 GPQFYGKALDCLKALRQQSIKKSEPTLYNNFMKKLKDFLIEKGRRDFWEMIVDDKQALIT 684
Query: 656 KSEAVDSDITDDEAGSFIVK 675
K+E+ DS ++ EA FI +
Sbjct: 685 KTESEDSSVSLGEAKDFIAE 704
>gi|390331386|ref|XP_788472.3| PREDICTED: X-ray repair cross-complementing protein 5-like
[Strongylocentrotus purpuratus]
Length = 729
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 185/738 (25%), Positives = 337/738 (45%), Gaps = 86/738 (11%)
Query: 2 ARTREALLLLLDVSPSMH-------SVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEE 54
++ +EA++++LDV PSM+ + L + + ++Q+K+ E+ +ILFGT
Sbjct: 3 SKEKEAIVIVLDVGPSMNQAPPGNCTTLETARDVITMILQRKVFAESKDEIALILFGTPG 62
Query: 55 TENELTKEVGGYEHVKVLQDIKVVDGHLVQSLK-HLPQGTCAGDYM--LIKKYGETYKG- 110
+ N++ Y+++ V + ++ D L+Q ++ ++ T +GD++ LI +
Sbjct: 63 SANKMD-----YDNITVERPFRLADLDLIQHIRSNIQASTESGDFVDALIVAMDLIHDAT 117
Query: 111 --------KKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKN---------- 152
K + L +D D + + + ++ GL N
Sbjct: 118 SEKASKFTKNRIILFSDLGGEFADDKLQNVTHSLKAMKTEVNMIGLPFDNTDGGGNGDDA 177
Query: 153 ---------------IVVRASLSGEPH-MRVIIENDNLLNIFSKKSSAKTLFVDSTTSLR 196
+ ++GE M ++ E + + F + A T+F
Sbjct: 178 RDQPSTSRGRGPPRKVKTPQQMAGERLVMNIVEEVNGCIYSFDEVIPAVTMF-------- 229
Query: 197 GARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEV 256
+ R + P T ++ +LE+ ++KI V Y K E + K K +F +
Sbjct: 230 ---EKRAVRP-TPWKVNLEIGSELKIPVSGYLKVKEATTKSWKSTFQKGHR--EFTPQTI 283
Query: 257 KVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFK-PEKSVKLLGFTDAS 315
+ + +D V E +++GYRYG ++PIS + + + +K P K +++LGFT S
Sbjct: 284 RSKHLN---DDEETEVEKEDQVEGYRYGNDIIPISEEDKKNMDYKKPGKVMQVLGFTKDS 340
Query: 316 NILRHYYMKD-VNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL 374
I +H + + V +F A+P + A ++ SAL A+ E N VAIVR + G + +G L
Sbjct: 341 KIKKHQQIGNSVYIFYAQPDDQAAAMSFSALVNALYETNSVAIVRRAY-SGSSAPRIGFL 399
Query: 375 TPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLA 434
P++ K N FY LPFAED+R + F S QP+E+Q A D+L+ +DL
Sbjct: 400 APHI--KANYEALFYIE-LPFAEDLRMYTFMSLDNNK-RCQPSEEQLAAVDSLIDNMDLM 455
Query: 435 PS-----GKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLA 489
+ G E L+P+ T NP +R L ++ + D P ++ ++ +P +
Sbjct: 456 TAEEDEDGDTEALKPKNTLNPYTQRLCQCLMHRALNPDDPIPGIETAIATYLQPCRAVAV 515
Query: 490 ESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSD-EPNGDGSVSDAQAVN----SME 544
+ + ++A F +++ + T + + G D EP + D + VN SM
Sbjct: 516 QCEPDVEAMQKLFKLEKAKAKENVTGDSIWKASDGGDGEPARKKAKVDDE-VNGGDLSMA 574
Query: 545 SKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAV 604
+ V ++G + P+ DF+A++S++D D +A M +I L++ S Y KA+
Sbjct: 575 GMAMGVVTEVGTVDPVGDFKAIISQKD-EDRFKEAAGQMGRRILQLIKESFGSQLYGKAL 633
Query: 605 ELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKKLSLISKSEAVDSDI 664
+ L R+ I EP+ FN L K+ ++ F+ + L+LI +EA DS +
Sbjct: 634 DCLRVYREQAIQLSEPETFNAYLRKLKDELKELLKVDFWQDVTKDGLTLIDVTEARDSKV 693
Query: 665 TDDEAGSFIVKSQPKHED 682
+ DEA FI + + ED
Sbjct: 694 SKDEADKFIQEEEVPMED 711
>gi|363736086|ref|XP_422072.3| PREDICTED: X-ray repair cross-complementing protein 5 [Gallus
gallus]
Length = 730
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 184/744 (24%), Positives = 332/744 (44%), Gaps = 93/744 (12%)
Query: 1 MART-REALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGT 52
MAR + A++L LDV +M S P E K+ ++ +Q+++ EV V+LFGT
Sbjct: 1 MARGGKSAIVLCLDVGITMSSSAPGEESSLEQAKKVVTKFLQRQVFAESKDEVAVVLFGT 60
Query: 53 EETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDYM--------LIKK 103
+ T+NEL Y+++ V + + + D L++ +++ Q G+ D++ L++K
Sbjct: 61 DGTKNELASR-DQYQNITVHRSLMLPDFDLLEDIQNRIQLGSQQADFLDAIIVCMDLLQK 119
Query: 104 --YGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV------- 154
G+ ++ K+H+ L TD P+ EDQ+ I + G+ ++ +
Sbjct: 120 ETLGKKFE-KRHIELFTDLSSPVS-------EDQLEIIIANLKKTGISLQFFLPFPVDGA 171
Query: 155 -----VRASLSGEPH-----------------------MRVIIENDNLLNIFSKKSSAKT 186
AS+ + H M + E L I++ + S +
Sbjct: 172 DGHGDTSASIYSQLHRNSFPRKRLTAQQKEGVDVVKKLMHTLDEEGGLEEIYTFRESLER 231
Query: 187 LFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAP 246
L + R A + L + + I++ YK EEK D
Sbjct: 232 LAMFKKIERRPA----------AWSCQLTIGSNLSIRIVAYKALTEEKVKKTWTVVD--- 278
Query: 247 STDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KS 305
+V+ + Y +D V + I+G+RYG +VP S + E +K+K E K
Sbjct: 279 -AKTLRKEDVQRETVYCLNDDDETEVQKDDTIQGFRYGSDIVPFSKEDEEQMKYKTEAKC 337
Query: 306 VKLLGFTDASNILRHYYMKDVNL-FIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQ 364
+LGF+ +S I RH YM + L A + A VA SAL +A+ E+N VAIVR + +
Sbjct: 338 FSVLGFSRSSQIQRHCYMGNQVLKVFAAKDDENAAVAFSALVQALDELNVVAIVRYAYDR 397
Query: 365 GQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAA 424
+ + +GV P + + + ++ LP+ EDVR++ F S K P Q A
Sbjct: 398 -RCNPQIGVAFPCIKDTY---ECLFYVQLPYMEDVRQYMFSSL-KNNKKCTPTADQLSAI 452
Query: 425 DNLVKMLDLA-PSGKGE----ILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKK 479
D+L+ ++L GE + +P PNP +R Y L+ K+ H + PP++ L +
Sbjct: 453 DSLIDSMNLVYEDHNGETFEDLFKPSKIPNPHFQRLYQCLQHKAFHPNEPLPPIEQHLLE 512
Query: 480 ITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDG-SVSDAQ 538
+ E + ++ ++ F +K+ K K+ K D PN + D +
Sbjct: 513 MLEVPCVVKERCKAPLEKVKALFPLKDAGKKKEEKTAQDIFKDEHEDGPNAKRRKIEDEE 572
Query: 539 AVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGI 598
S+ V +G + P +DF+ ++ +++ D+ D + + + N+I LEN +
Sbjct: 573 DSFSIMKLAEGNVTSVGSVNPAEDFQILVRQKN-ADFKDVS-QQLINRIDQFLENRSSQY 630
Query: 599 NYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKKLSLISKSE 658
Y K + + R I + + FND L+ + + + F++ ++ ++SLI+K E
Sbjct: 631 -YMKGINCIRVFRGEAIKLSKVQCFNDFLQALKSKVEDKALADFWEIVVQDRISLITKDE 689
Query: 659 AVDSDITDDEAGSFIVKSQPKHED 682
A S +T +EA F+ + K+E+
Sbjct: 690 AEGSSVTSEEAEKFLTPKEKKNEN 713
>gi|325193327|emb|CCA27667.1| conserved hypothetical protein [Albugo laibachii Nc14]
gi|325193515|emb|CCA27822.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 709
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 191/686 (27%), Positives = 312/686 (45%), Gaps = 74/686 (10%)
Query: 32 LIQKKLIYGKNHEVGVILFGTEETENELTKEVG--GYEHVKVLQDIKVVDGHLVQSLKHL 89
++ +K+ Y N E+G++ FG++ T N L E G Y H+ + + V + SL +
Sbjct: 48 IMHQKMFYAPNDEIGMVAFGSKMTRNHLNDEHGEDQYAHIFTISHLDVPNVETCNSLSKV 107
Query: 90 PQGTCAGD--------------YMLIKKYGETYKGKKHLCLITDALCPLKD-PDVGTKED 134
+ C D L+ + + K+ + L+TDA +++ D+ +
Sbjct: 108 SE-LCGDDKNIKVDVLDGMIVALDLLHRRTLAMQFKRRIILLTDASSKIENTSDLEPVVE 166
Query: 135 QVST--IARQMVAFG-------LRMKNIVVRASLSGEPHMRVIIE-NDNLLNIFSKKSSA 184
+ + +A ++V F L K + + H E N+ +L +
Sbjct: 167 MMKSLHVAIEIVVFDFVHPQEKLEKKAKEDIGCVVKQEHPTYFKEANEKMLLSLVQAVGG 226
Query: 185 KTLFVDSTTSL--RGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYS 242
+ + V+ L RG +K + VT FRGDLE+ I V+ + K P+L K S
Sbjct: 227 QLVSVEEEIKLLKRGMKKR--VMQVTKFRGDLEIG-SFGIPVYCFIKVKMSTLPSLMKES 283
Query: 243 DKAPSTDKFATHE-VKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFK 301
+ + HE V+ D Y + P + VPP+QRIK Y YG + VP SSA+ EA KF
Sbjct: 284 ELSQEK-----HEGVRQDRRYMDPDSPDEEVPPDQRIKAYTYGHESVPFSSADLEAFKFH 338
Query: 302 PEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCV 361
EKS+KLLGF DA ++ +M + N+F+++P A + L AM+ N+VAI R V
Sbjct: 339 TEKSLKLLGFVDAKSVHPANFMVNTNVFLSDPTKKNAATCFATLVNAMRMKNQVAIARFV 398
Query: 362 WRQGQQSVVVGVLTPNVSEKINIP-DSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQ 420
R+ V+ L P++ K IP +F+ LPF ED+R+F+FPS + P+++Q
Sbjct: 399 PRKNAAPKVIA-LIPHIPAK-EIPYHAFWSQQLPFEEDLRDFEFPSILQDNSKSIPSKEQ 456
Query: 421 QEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKI 480
Q+ A++LV L S + + P NP L RFY + ++ DA PL +
Sbjct: 457 QQIANSLVDGL----SVDDDEINPRTCYNPVLRRFYDSVVARAIDPDAGISPLPKC--ES 510
Query: 481 TEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVS----- 535
E T ++ I AF F +KE +KKS + S EP V
Sbjct: 511 MEARKTRVS---MLILAFDDAFQLKE--AMKKSVESKKQTFWSDVAEPEDVIDVHVKKEY 565
Query: 536 --DAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMS-------RRDCPDWVDKAIEDMKNK 586
A+A + K V +G L PI DFEA++ + D + +AI +K +
Sbjct: 566 PLKAEAFDEKIEKE--QVHYVGSLNPIADFEALVDTVKSEPPQNDQNGQIARAIAGLKAQ 623
Query: 587 IFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFL 646
I +L S+ ++ KA++ L RK + FN L+ ++ + + +D +
Sbjct: 624 IEHIL--SHGQLSCTKALQCLQHFRKRSVDLGYSIHFNSFLQ---QLKAQYGATRVWDSI 678
Query: 647 MSKKLSLISKSEAVDSDITDDEAGSF 672
+ ++L+S + IT EA F
Sbjct: 679 QAAGITLLSTDDDDSISITKQEAELF 704
>gi|348519928|ref|XP_003447481.1| PREDICTED: X-ray repair cross-complementing protein 5 [Oreochromis
niloticus]
Length = 723
Score = 178 bits (452), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 184/731 (25%), Positives = 324/731 (44%), Gaps = 77/731 (10%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTE 53
MA ++ A++L +DV +M + P E K+ + +Q+++ E+ ++LFGT+
Sbjct: 1 MAGSKTAVVLCMDVGLTMSNSAPGEESSFELAKKVIQKFVQRQVFSETKIELALVLFGTD 60
Query: 54 ETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDYM------LIKKYGE 106
T+N L+++ G Y++++V + +++ D L+ +++ Q + GD++ + + E
Sbjct: 61 STDNPLSQD-GQYQNIRVHRHLRIPDCELLIEIENQVQPESKEGDWLDALVVCMDLLHTE 119
Query: 107 TYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV------------ 154
T KGKK+ CL + L D + T E+ + I + G+ M+ +
Sbjct: 120 T-KGKKYDCL---NIALLTDLNTQTNEESLEVIINNLTQSGITMQFFLPFPVEEDKEGQG 175
Query: 155 -VRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFV----DSTTSLRGARKTRDISPVTI 209
G P + + N+ K +L V D + R A I + +
Sbjct: 176 DSERRDPGHPGTGKGLSREQKKNMELVKEMMLSLDVEDGLDEIHTFRNA-----IEELCM 230
Query: 210 FR----------GDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVD 259
F+ L + + I++ YK +EK P + A S K +VK +
Sbjct: 231 FKRVERRPVAWPCQLTIGSSLSIRIVGYKAVTDEK-PKKMWITVDAQSHQK---DDVKRE 286
Query: 260 YEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNIL 318
Y +D V + I+G+RYG +VP S + E +K+K + K +LGFT S I
Sbjct: 287 TVYCLDDDNETEVQKDDIIQGFRYGSDIVPFSKVDQEQMKYKHDGKCFAVLGFTKQSAIH 346
Query: 319 RHYYMKDVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPN 377
RH +M L I A + A VA+SAL RA+ E+ VAIVR + + V G P
Sbjct: 347 RHQFMGSQILKIFAARDDEHAGVALSALIRALNELQMVAIVRYAYNRTSNPQV-GAAFPC 405
Query: 378 VSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV-KMLDLAPS 436
+ + + + LPF ED+R F FPS + P++ Q A D+L+ M+ +
Sbjct: 406 IKQD---SECLMYVQLPFMEDLRHFTFPSLEN--KKFTPSDAQLSAVDSLIDSMMLVEED 460
Query: 437 GKGE---ILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQS 493
GE + +P PNPA +R + L ++ PP++ LK + + Q
Sbjct: 461 ENGEQRDLFKPHRIPNPAFQRHFQCLHHRAVSPGTPLPPIEPWLKAALDRPEVITERCQD 520
Query: 494 AIDAFCGQFVIKE---NPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNSMESKPVVT 550
+D +F + E KLK S + F +E + + + N E +
Sbjct: 521 PLDVLKRKFPLTEVEKKKKLKTSAQIFGKESEESEAKKVKEDEAEEYNLANIAEG----S 576
Query: 551 VDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVAL 610
V +G + P +DF A++ ++ P + + + ++I LL N N Y K++ + A
Sbjct: 577 VTSVGSVDPARDFRALIKQKILP--FGEVCQQLTHRIEQLLSNKNTQY-YMKSITCIQAF 633
Query: 611 RKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKKLSLISKSEAVDSDITDDEAG 670
R+ + + +N L+ + R F++ L+ L+LISK E S ++ EA
Sbjct: 634 REQSVKLANAEHYNSYLQSLKGSIPNRGLEVFWELLVQDGLTLISKDEVEGSTVSKAEAN 693
Query: 671 SFIVKSQPKHE 681
F+V + K E
Sbjct: 694 QFLVAEEQKEE 704
>gi|410897090|ref|XP_003962032.1| PREDICTED: X-ray repair cross-complementing protein 5-like
[Takifugu rubripes]
Length = 726
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 190/738 (25%), Positives = 327/738 (44%), Gaps = 88/738 (11%)
Query: 1 MARTREALLLLLDVSPSMHSVLP-------DVEKLCSRLIQKKLIYGKNHEVGVILFGTE 53
MAR R AL+L +DV SM + P D +K+ + +Q+++ E+G++LFGT+
Sbjct: 1 MARARSALVLCMDVGFSMSNSAPGEEAPFEDAKKIIQKFVQRQVFAESKDELGLVLFGTD 60
Query: 54 ETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKH-LPQGTCAGDYM-----LIKKYGET 107
T+N L ++ G YE++ V + + V D L++ +++ L D+M +
Sbjct: 61 STKNPLHQD-GQYENITVFRQLMVPDFELLEEIQNQLQPENQQADWMDALVVSMDLLQTE 119
Query: 108 YKGKKH----LCLITD------------ALCPLKDPD----------VGTKEDQ-----V 136
KGKK+ + L+TD + LK D VG KE+ +
Sbjct: 120 IKGKKYDRLNIVLLTDLNIQASSDQLDIIIENLKKADITLQFFLPFPVGDKEESGGDGPI 179
Query: 137 STIARQMVAFGLRMKNIVVRASLSGEPHMRVII----ENDNLLNIFSKKSSAKTLFVDST 192
S + GL R G M+ I+ E+D L I++ +++ + L +
Sbjct: 180 SDPGHHGMGKGLS------REQKEGLDMMKHIMLSLDEDDGLSQIYTFRNAIEQLCMFKQ 233
Query: 193 TSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFA 252
R P+ + L + + I++ YK +EK K D A S +
Sbjct: 234 IERR---------PMA-WPCQLTVGSCLSIRIVGYKAVMQEKLKKTWKTVD-AQSNRQED 282
Query: 253 THEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGF 311
V V Y +D V ++ I+G+RYG +VP S + E +K+K + K +LGF
Sbjct: 283 VKRVTV---YCLDDDNETEVQVDETIQGFRYGSDIVPFSKVDQEQMKYKHDGKCFAVLGF 339
Query: 312 TDASNILRHYYMKD--VNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSV 369
T + + RH ++ + + +F A+ + A VA+SAL RA+ E+ VAIVR + + + +
Sbjct: 340 TKQNLVQRHQFIGNQVIKIFAAK-DDEHAGVALSALIRALHELQMVAIVRYAYDR-RCNP 397
Query: 370 VVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVK 429
+G P + ++ + + LPF ED+R+F FPS P + Q A D+L+
Sbjct: 398 QIGAAFPCIKQQY---ECLMYIQLPFMEDLRQFSFPSLENNK-KITPTDAQLTAVDSLID 453
Query: 430 MLDLAPSGKGE----ILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDP 485
+ L G E I +P PNP +R + L ++ + PP++ LK I E
Sbjct: 454 SMMLVEEGDEEKPKDIFKPHHIPNPDFQRLFQCLHHRAVNPGTPLPPMEPWLKAILERPD 513
Query: 486 TLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNSMES 545
+ Q+ ++ F + E K KK+ + S EP+G + + +
Sbjct: 514 VINERCQAPLEELKRVFPLTEVEK-KKNVKTSAEIFGKDSGEPDGKKAKLEEEEEEEYNL 572
Query: 546 KPVV--TVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKA 603
+ TV +G + P +DF ++ ++ P + + + +I LL N N Y K+
Sbjct: 573 ANITEGTVTSVGSVEPARDFRVLVKQKRIP--FGEVCQQLIQRIEQLLSNRNTQY-YMKS 629
Query: 604 VELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKKLSLISKSEAVDSD 663
+ + A R+ + +N+ L+ + R F+D L L+LISK E S
Sbjct: 630 ITGIQAFREQSVKLANADLYNNYLQSLKGSITNRQLEVFWDLLSQDGLTLISKDEVESSA 689
Query: 664 ITDDEAGSFIVKSQPKHE 681
I+ EA F+V + K E
Sbjct: 690 ISRAEANQFLVAEEKKEE 707
>gi|307108658|gb|EFN56898.1| hypothetical protein CHLNCDRAFT_144569 [Chlorella variabilis]
Length = 674
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 184/719 (25%), Positives = 307/719 (42%), Gaps = 105/719 (14%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKK----------LIYGKNHEVGVILF 50
M+ RE+++ LLDV P MH + + + +K +++ EV ++LF
Sbjct: 1 MSNKRESVVFLLDVGPRMHPHVAHAARAAGDFMTQKASRRARPTPAMLHKVKDEVCLLLF 60
Query: 51 GTEETEN-ELTK---EVGG---YEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDY----- 98
GT +T+N E TK E GG Y H+ D+ + +++L L G D+
Sbjct: 61 GTSKTDNREHTKSAMEEGGEGEYAHIVEAHDLAPPEASYIKTLHTLQGGQGRSDFKEALA 120
Query: 99 --MLIKKYGETYKGKKHLCLITDALCPLK--DPDVGTKEDQVSTIARQMVAFGLRMKNIV 154
+ K + L+T+ LC DPD D +++ +A GL+ + I
Sbjct: 121 VAAAVLVQEREAASAKRIVLVTN-LCSRAQDDPD-----DALTSC----LAEGLQHQGIF 170
Query: 155 VRASLSGEPHMRVIIENDNLLNI-----FSKKSSAKTLFVDSTTSLRGARKTRDISPVTI 209
+ L P E D N+ ++ S + S +L GA ++
Sbjct: 171 LDVLLLDVPEDDERYEQDKTYNLNQVAAICQELSHRERHFSSALALTGAFPAHEVLARAY 230
Query: 210 FRGDLELSEKMKIKV-------WVYKKTGE---EKFPTLKKYSDKAPSTDKFATHEVKV- 258
+ G L + K+ IK W+ K G+ EKFP + S + A V
Sbjct: 231 YSGVLSIGTKLNIKAGTAGLYSWLVKTAGKADKEKFPAAGRESTVVEGVVEAALEGVDTG 290
Query: 259 -----DYEYKSVEDPSKVVPPEQRI-KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFT 312
+Y Y E+ PEQ + YRYG +VP + + + F E+ +KL+GF
Sbjct: 291 VPRGREYYYVDQEEHGPEEVPEQEVASAYRYGINLVPFEADQRRDLAFPTERGMKLIGFL 350
Query: 313 DASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVG 372
I RH YM ++ +A+ + + VA++AL M+ + AI+R V + + +
Sbjct: 351 PEDAIPRHLYMAKCDVVVADKASQASCVAMAALVAGMRRQRQKAILRWVAKAYSRPELF- 409
Query: 373 VLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD 432
+ +P + + P N LPF ED+R+++FPSF+K SW+P+E Q EAA LV +
Sbjct: 410 LASPVPAGATSAP-HLLLNALPFMEDLRDYRFPSFTK--KSWEPSEAQVEAAAALVASMS 466
Query: 433 LAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQ 492
L G E L PE TP+PAL R Y + +A D+ ++ P P L ++
Sbjct: 467 LG-QGDLEQLLPERTPDPALHRLYFECGRRVADPEAPLQEEDELASEVLLPHPDRLPGAE 525
Query: 493 SAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNSMESKPVVTVD 552
+A++A F P + + G +P G
Sbjct: 526 AALEAAAAAF-----PTDQAAKASRRAAAKIGLQDPAG---------------------- 558
Query: 553 KIGDLTPIQDFEAMMSRRDCP-DWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALR 611
DF +++ P D +D + + +FG + +S + + V+L+ LR
Sbjct: 559 ---------DFRKLLAEGGDPHDALDALATAVVHLVFGSMGSS----KFQQGVQLVDLLR 605
Query: 612 KGCILEQEPKQFNDVLEKVCKICRK-RNFSTFFDFLMSKKLSLISKSEAVDSDITDDEA 669
+GC+ EP FND LE V K C++ + F+ +L +++ I+K EA S + +A
Sbjct: 606 EGCVDANEPSVFNDFLEVVEKKCKQDETKADFWKWLSRREIKKIAKDEAGASQLEPSQA 664
>gi|327282822|ref|XP_003226141.1| PREDICTED: x-ray repair cross-complementing protein 5-like [Anolis
carolinensis]
Length = 748
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 187/734 (25%), Positives = 331/734 (45%), Gaps = 92/734 (12%)
Query: 1 MARTREALLLLLDVSPSM-HSVLPD------VEKLCSRLIQKKLIYGKNHEVGVILFGTE 53
M R + A++L +DV SM HS L + +K+ + +Q+++ E+ ++LFGTE
Sbjct: 1 MWRAKSAVVLCMDVGFSMSHSGLGEESPFEQAKKVITVFVQRQVFAESKDEISLVLFGTE 60
Query: 54 ETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTC-AGDYM--------LIKK- 103
T N L E Y+H+ V + + + D L++ ++++ Q T GD + L+++
Sbjct: 61 NTANSLASE-DQYQHIAVHRHLMLPDFDLLEDIQNVIQPTSEQGDILDALIVSMDLLQRE 119
Query: 104 -YGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMK----------- 151
G+ Y+ K H+ + TD P EDQ+ I + G+ ++
Sbjct: 120 TVGKKYE-KLHIEVFTDLGSPFS-------EDQLDVIIANLKKTGISLQFFLPFPMNDEG 171
Query: 152 ---------------NIVVRASLSGEPH---------MRVIIENDNLLNIFSKKSSAKTL 187
N R LS + M + + D L I++ + S + L
Sbjct: 172 GSGDKTDCAHSHKPQNSFPRKGLSEQQKEGLKMVRKLMVSLDKEDGLEEIYTFRESLEQL 231
Query: 188 FVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPS 247
+ R P+ + L + K+ IK+ YK EEK T K +
Sbjct: 232 SMFKKVERR---------PMP-WPCQLTIGSKLSIKIVAYKSFTEEK--TKKSWIVVDAK 279
Query: 248 TDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSV 306
T K +++ + Y +D V E I+G+RYG +++P S + E +K+K + K
Sbjct: 280 TSK--KDDLQKETVYCLNDDDETEVQKEDVIQGFRYGSEIIPFSKVDEEQMKYKTDGKCF 337
Query: 307 KLLGFTDASNILRHYYM-KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQG 365
+LGF+ AS +LRH YM V A + A VA+S+L A+ E++ VAIVR V+ +
Sbjct: 338 AVLGFSKASQVLRHRYMGHQVLKVFAAKDDEAAAVALSSLIHALDELDMVAIVRYVYDRR 397
Query: 366 QQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAAD 425
Q V G P + N + + LP+ ED+R++ F S K P E Q A D
Sbjct: 398 SQPQV-GAAFPLIK---NEYECLAYVQLPYMEDLRQYMFSSL-KNNKKCTPTEDQLLAVD 452
Query: 426 NLVKMLDLAPSGKGE-----ILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKI 480
+L+ + L + E + PNP +R Y L+ K+ H D+ PP++ L +
Sbjct: 453 SLIDSMSLVYEDESEGTVEDTFKTSKFPNPQFQRLYQCLQHKAFHPDSPLPPIEKHLLDM 512
Query: 481 TEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGD-GSVSDAQA 539
E + + Q+ ++ F +K+ K+K+ K + D P+ V D
Sbjct: 513 LEAPQVVREKCQAPLEKVKSLFPLKDAGKMKEQKTAQHIFKDNTVDGPSSQKAKVEDDDV 572
Query: 540 VNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGIN 599
+ V +G + P+++F ++ R+ D+ + + +K+ I LEN +
Sbjct: 573 GFRIADLAEGNVTAVGSVNPVENFRVLV-RQKTVDFKEVNQQLIKH-IHQFLENRGH-LY 629
Query: 600 YPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKKLSLISKSEA 659
Y K+++ + R+ I E + FND LE + K +N + F++ ++ K+SLI+K E+
Sbjct: 630 YSKSIDCIKIFREEAIKLSEVQCFNDFLETLKKRVEDKNLTDFWEIIVQDKISLITKEES 689
Query: 660 VDSDITDDEAGSFI 673
S +T +++ F+
Sbjct: 690 EGSLMTAEDSKKFL 703
>gi|326922950|ref|XP_003207705.1| PREDICTED: x-ray repair cross-complementing protein 5-like
[Meleagris gallopavo]
Length = 796
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 178/736 (24%), Positives = 325/736 (44%), Gaps = 92/736 (12%)
Query: 7 ALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETENEL 59
A++L LDV +M S P E ++ ++ +Q+++ EV V+LFGT+ T+N L
Sbjct: 33 AIVLCLDVGTTMSSSAPGEESPLEQAKRVMTKFLQRQVFAESKDEVAVVLFGTDGTKNNL 92
Query: 60 TKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDYM--------LIKK--YGETY 108
Y+++ V + + + D L++ ++++ Q GT D++ L+++ G+ +
Sbjct: 93 ASR-DQYQNITVHRSLMLPDFDLLEDIQNMIQLGTQQADFLDAIIVCMDLLQQETLGKKF 151
Query: 109 KGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV------------VR 156
+ K+H+ L TD P+ EDQ+ I + G ++ +
Sbjct: 152 E-KRHIELFTDLSSPVS-------EDQLEIIIANLKKTGTSLQFFLPFPVDGADGRGDAS 203
Query: 157 ASLSGEPH-----------------------MRVIIENDNLLNIFSKKSSAKTLFVDSTT 193
AS+ + H M + E L I++ + S + L +
Sbjct: 204 ASIFSQLHQNSFPRKRLTAQQKEGIDVVKKLMHTLDEEGGLEEIYTFRESLERLAMFKKI 263
Query: 194 SLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFAT 253
R A + L + + I++ YK EEK + D
Sbjct: 264 ERRSAP----------WSCQLTIGSNLSIRIVAYKALTEEKVKKIWTVVD----AKTLRK 309
Query: 254 HEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFT 312
+V+ + Y +D V + I+G+RYG +VP S + E +K+K E K +LGF+
Sbjct: 310 EDVQRETVYCLNDDDETEVQKDDTIQGFRYGSDIVPFSKEDEEQMKYKTEAKCFSVLGFS 369
Query: 313 DASNILRHYYMKDVNL-FIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVV 371
+S I RH YM + L A + A VA SA +A+ E+N VAIVR + + + + +
Sbjct: 370 RSSQIQRHCYMGNHVLKVFAAKDDENAAVAFSAFVQALDELNVVAIVRYAYDR-RCNPQI 428
Query: 372 GVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKML 431
GV P + + + ++ LPF EDVR++ F S K P Q A D+L+ +
Sbjct: 429 GVAFPCIKDAY---ECLFYVQLPFMEDVRQYVFSSL-KNNKKCSPTVDQLSAIDSLIDSM 484
Query: 432 DLA-PSGKGE----ILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPT 486
+L GE + +P PNP +R Y L+ K+ H + PP++ L ++ E
Sbjct: 485 NLVYEDDDGETFEDLFKPSKIPNPHFQRLYQCLQHKAFHPNEPLPPIEQHLLEMLEMPCV 544
Query: 487 LLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDG-SVSDAQAVNSMES 545
+ ++ ++ F +K+ K K+ K D PN D + S+
Sbjct: 545 VKERCKAPVEKVKALFPLKDAGKKKEEKTAQDIFKDDHEDGPNAKRRKTEDEEDSFSIMK 604
Query: 546 KPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVE 605
V +G + P +DF+ ++ +++ D+ D + + + N+I LEN + Y K +
Sbjct: 605 LAEGNVTSVGSVNPAEDFQILVRQKNA-DFKDVS-QQLINRIDQFLENRSSQY-YMKGIN 661
Query: 606 LLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKKLSLISKSEAVDSDIT 665
+ R + + + FND L+ + + + F++ ++ ++SLI+K EA S +T
Sbjct: 662 CIKVFRGEAMKLSKVQCFNDFLQALKSKVEDKALADFWEIVVQDRISLITKDEAEGSSVT 721
Query: 666 DDEAGSFIVKSQPKHE 681
+EA F+ + K+E
Sbjct: 722 SEEAEKFLTPKEKKNE 737
>gi|432932472|ref|XP_004081756.1| PREDICTED: X-ray repair cross-complementing protein 5 [Oryzias
latipes]
Length = 725
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 187/738 (25%), Positives = 336/738 (45%), Gaps = 89/738 (12%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTE 53
MA + AL+L +DV SM + P E K+ + +Q+++ EV ++LFGT+
Sbjct: 1 MASAKSALVLCMDVGFSMSNSGPGEESPFDLSKKVIQKFVQRQVFAETKDEVALVLFGTD 60
Query: 54 ETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDYM--------LIKK 103
T+N L ++ Y+++ V + + V D L++ ++H P+G A D++ L++K
Sbjct: 61 ATKNPLEQD-EQYQNIVVHRHLMVPDFDLLEEIEHQIHPEGQQA-DWLDALVVCMDLLQK 118
Query: 104 YGETYKGKK-HLCLITDALC----------------------------PLKDPDVGTKED 134
+ K + ++ L+TD LC P++D + G +
Sbjct: 119 ETQGKKCDRLNIVLLTD-LCTQVSPDKLEVIIENLKQADITLQFFLPFPVEDAEEGQGDG 177
Query: 135 QVSTIARQMVAFGLRMKNIVVRASLSGEPH-MRVIIENDNLLNIFSKKSSAKTLFVDSTT 193
+ GL + ++ L H M + E D L +++ +++ + L +
Sbjct: 178 EQRDPGHPGAGKGLSREQ---QSGLEMVKHIMLSLDEEDGLNEVYTFRNAIEQLCM---- 230
Query: 194 SLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFAT 253
K D P+ + L + + I++ YK EEK + D A S +
Sbjct: 231 -----FKRIDRRPMA-WPCQLTIGSSLSIRIVGYKAVTEEKLKKMWITVD-AQSNQR--- 280
Query: 254 HEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFT 312
+VK + Y +D V E I+G+RYG +VP S + E +K+K + KS +LGFT
Sbjct: 281 EDVKKETVYCLDDDNETEVQKEDIIQGFRYGSDIVPFSKVDQEQMKYKHDGKSFAVLGFT 340
Query: 313 DASNILRHYYMKDVNLFIAEP-GNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVV 371
+ +LRH +M + I P + A VA+SAL R + E+ VAIVR + + + + V
Sbjct: 341 KQNLVLRHQFMGSQVVKIFPPKDDEHAGVALSALIRGLDELKMVAIVRYAYDR-RSNPQV 399
Query: 372 GVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV-KM 430
G P + + + + LPF ED+R F FPS P+E Q A D+L+ M
Sbjct: 400 GAAFPCIKQTY---ECLIYVQLPFMEDLRPFAFPSLENNK-KICPSETQLSAVDSLIDSM 455
Query: 431 LDLAPSGKGEI---LQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTL 487
+ + GE+ L+P PNPA +R + L ++ + A PPL+ L+ + +
Sbjct: 456 MLIEKDENGELIDLLKPHHIPNPAFQRHFQCLHHRAVNPGAPLPPLEPWLQAKLDRPEVI 515
Query: 488 LAESQSAIDAFCGQFVIKE---NPKLKKSTRRFLREKPSGSDEPNGD-GSVSDAQAVNSM 543
Q++++ +F + E KLK S + F ++ S E + D G +A+ ++
Sbjct: 516 KERCQASLEEIKRKFPLTEVEKKKKLKTSAQIFGKD----SKEASADKGKEDEAEEEYNL 571
Query: 544 ESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKA 603
+V +G + P +DF ++ ++ P +A + + ++I LL N N Y K+
Sbjct: 572 ADIAEGSVTSVGSVDPARDFRTLLKQKSLP--FGEACQQLTHRIEQLLSNKNTQY-YMKS 628
Query: 604 VELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKKLSLISKSEAVDSD 663
+ + A ++ + +N L+ + + R F+D L+ ++LIS E S
Sbjct: 629 ITCIQAFKEQSVKMANADLYNSYLQSLKRSIPSRGLEVFWDLLVQDGVTLISSEEVSGSL 688
Query: 664 ITDDEAGSFIVKSQPKHE 681
I+ +EA F+ + K E
Sbjct: 689 ISKNEANEFLKAEEIKQE 706
>gi|118379947|ref|XP_001023138.1| Ku70/Ku80 beta-barrel domain containing protein [Tetrahymena
thermophila]
gi|89304905|gb|EAS02893.1| Ku70/Ku80 beta-barrel domain containing protein [Tetrahymena
thermophila SB210]
Length = 757
Score = 169 bits (427), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 141/519 (27%), Positives = 236/519 (45%), Gaps = 57/519 (10%)
Query: 200 KTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVD 259
+TR ++ + F GDL+L+ + I V ++ KT EEK P LK YS + +++ D
Sbjct: 224 RTRQVNLRSKFNGDLQLAPNLNIAVQMFTKTSEEKLPGLKMYSLAVDFNPHCESGQIERD 283
Query: 260 YEYKSVEDPS-KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNIL 318
EDP+ + K Y YG Q++P++ A + + + +K+LGF D+ +
Sbjct: 284 VIMALQEDPNLNPIDKSNITKAYHYGKQLIPVTQALEAQMNYTSNRELKVLGFVDSKKVP 343
Query: 319 RHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNV 378
R +M V++ IA +S A ++AL +M + NK AI R VWR + VLTP +
Sbjct: 344 RQSFMAGVDIIIANKNDSVAKKGIAALCHSMIQTNKYAIARYVWRNNGAPKLC-VLTPQI 402
Query: 379 SEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGK 438
+ + Y +P +E VR+FQF S + ++QQ+ +L+ +DL
Sbjct: 403 GKDY---ECLYMCQIPTSESVRDFQFNSLK------ESTKEQQDLMGSLIDKMDLMNLED 453
Query: 439 G-EILQPELTPNPALERFYH---HLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSA 494
G E LQ + T NP + FY H D PPLD +++ P+ + ++
Sbjct: 454 GEEALQMKYTFNPTRQYFYQTVFHRVFNPPDADTKIPPLDPNIRDYITPEKKVYPKAAEE 513
Query: 495 IDAFCGQFVIKENPKLKKSTRRFLREK--------PSGS-DEP-------NGDGSVSD-- 536
+ F ++E + +++ ++ P+ + + P NG D
Sbjct: 514 LKKIKESFQLQEQEIKDEISKKIFWQQLFNPNYQVPAANINAPQVQIKMENGQMESEDVE 573
Query: 537 --AQAV----NSMESKPVV------------TVDKIGDLTPIQDFEAMMSRRDCPDWVDK 578
AQ + +E+ P+ V K+ ++P+ DF MM+ + D V
Sbjct: 574 QQAQILVDVKEELENIPISKKFAFDDYNKDDVVRKVSSVSPVDDFFKMMTNKR-EDLVSD 632
Query: 579 AIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQE----PKQFNDVLEKVCKIC 634
AI ++ I L+E S G Y KA+E + A RKGC E E PK FN+ L
Sbjct: 633 AISQIQGMISQLIETSIRGSYYEKALECIKAFRKGCTSEYEQLEAPK-FNNFLNTFKDKL 691
Query: 635 RKRNFSTFFDFLMSKKLSLISKSEAVDSDITDDEAGSFI 673
K + F+ L+ + ++LI+ E+ S+ T EA F+
Sbjct: 692 LKSDQKGFWKMLIQQGITLITDKESTKSNFTTKEALQFL 730
Score = 39.3 bits (90), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 16/88 (18%)
Query: 5 REALLLLLDVSPSMHSVLPD----------VEKLCSRLI-QKKLIYGKNHEVGVILFGTE 53
+EA ++LLD+ SM L D + C +L+ Q+K+ K HEVG+ILFG +
Sbjct: 4 KEATIILLDMGSSMQQYLGDRGTNGQKRIEIAVNCIKLLLQQKMFNTKTHEVGLILFGLK 63
Query: 54 ETENELTKEVGG-----YEHVKVLQDIK 76
+ ++ + G + +K +QD+K
Sbjct: 64 DEGDDKIMYIRGIGKPDIDFLKNVQDLK 91
>gi|410969382|ref|XP_003991175.1| PREDICTED: X-ray repair cross-complementing protein 5 [Felis catus]
Length = 1104
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 186/756 (24%), Positives = 332/756 (43%), Gaps = 115/756 (15%)
Query: 1 MARTRE--ALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFG 51
MAR+R A++L +DV +M + LP E KL + +Q+++ E+ ++LFG
Sbjct: 1 MARSRSKAAIVLCMDVGSAMSNSLPGEESPFELAKKLMTVFVQRQVFAESKDEIALVLFG 60
Query: 52 TEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDYM--LI------- 101
T+ TEN L + Y+++ V + + + D L++ ++ Q G+ D++ LI
Sbjct: 61 TDGTENALAGK-DQYQNITVHRHLMLPDFDLLEDIESKIQPGSQQADFLDALIVCMDVIQ 119
Query: 102 -KKYGETYKGKKHLCLITDALCPL----------------------------KDPDVGTK 132
+ G+ + GK+H+ + TD P K+ G +
Sbjct: 120 QETVGKKF-GKRHIEVFTDLSSPFSQDQLDIIIHNLEKSGISLQFFLPFPVGKEDGTGDR 178
Query: 133 EDQVSTIARQMVAF-----------GLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKK 181
D S + + +F G+RM V+ SL GE D L I+S
Sbjct: 179 GDGNSCLDQHGPSFPLKGITEQQKEGIRMVKKVM-MSLEGE---------DGLDEIYS-- 226
Query: 182 SSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKY 241
F +S LR +KT S + L + + IK+ YK +EK K
Sbjct: 227 ------FSESLRQLRVFKKTERYS--VPWLCTLTIGSNLAIKIVAYKAIMQEKV----KK 274
Query: 242 SDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFK 301
S +++ + Y +D VP E I+G+RYG +VP S + E +++K
Sbjct: 275 SWTVVDARTLKKEDIQKETVYCLQDDDETEVPKEDTIQGFRYGSDIVPFSKVDEEQMRYK 334
Query: 302 PE-KSVKLLGFTDASNILRHYYMKDVNL-FIAEPGNSRATVAVSALARAMKEMNKVAIVR 359
E K +LGF +S + R Y++ + L A + A VA+S+L A+ E++ VA+VR
Sbjct: 335 SEGKCFSVLGFCRSSQVHRRYFVGNQVLKVFAAKDDEAAAVALSSLIHALDELDMVAVVR 394
Query: 360 CVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQ 419
+ G+ + VG+ P + + + + LPF ED+R++ F S K P E
Sbjct: 395 YAY-AGRTNPQVGMAFPYIKDAY---ECLMYVQLPFMEDLRQYMFSSL-KNSKKCTPTEA 449
Query: 420 QQEAADNLVKMLDLAPSGKGEILQPEL-----TPNPALERFYHHLELKSEHQDAAPPPLD 474
Q A D L+ + L + E +L PNP +R Y L ++ H PP+
Sbjct: 450 QLSAVDALIDSMSLVKKDEKEDTIEDLFPTTKIPNPQHQRLYQCLAHRALHPQEPLPPIQ 509
Query: 475 DSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNG--DG 532
+ + +P + A+ Q + F + E K K P+ + P+ +G
Sbjct: 510 QHILNMLDPPAEVTAKCQIPLSKIKTVFPLTEATKKKDQV-------PAQNIFPDNHEEG 562
Query: 533 SVS------DAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNK 586
S + +A S+ S +V ++G + P ++F ++ ++ ++A + N+
Sbjct: 563 PASKKLKTQEGEACFSVSSLAEGSVTRVGSVNPAENFRVLVRQKKAS--FEEASRQLINQ 620
Query: 587 IFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFL 646
I L ++NE + K+++ + R+ I E + FN+ L+ + + + F+D +
Sbjct: 621 IEQFL-DTNETPYFMKSMDCITVFREEAIQVSEEQCFNNFLKALREKVEIKQLKHFWDIV 679
Query: 647 MSKKLSLISKSEAVDSDITDDEAGSFIVKSQPKHED 682
+ ++LI+K EA S IT +EA F+ + +ED
Sbjct: 680 VQDGITLITKDEAPGSSITAEEAKKFLAPRENPNED 715
>gi|417404249|gb|JAA48890.1| Putative dna-binding subunit of a dna-dependent protein kinase ku80
autoantigen [Desmodus rotundus]
Length = 732
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 183/743 (24%), Positives = 334/743 (44%), Gaps = 90/743 (12%)
Query: 1 MARTRE--ALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFG 51
MAR++ A++L +DV +M++ P E K+ + +Q+++ E+ ++LFG
Sbjct: 1 MARSKNKAAVVLCMDVGFTMNNSFPGEESPFEQAKKVITMFVQRQVFAESKDEIALVLFG 60
Query: 52 TEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDYM--------LIK 102
T+ TEN L E Y ++ V + + + D +L++ ++ Q G+ D++ +I+
Sbjct: 61 TDGTENALACE-DQYRNITVHRHLMLPDFNLLEDIESKIQPGSQQADFLDALVVCMDVIQ 119
Query: 103 K--YGETYKGKKHLCLITDALCPL-KDP-DVGTKEDQVSTIARQMV---------AFGLR 149
K G+ ++ KKH+ + TD P KD D+ + S+I+ Q G R
Sbjct: 120 KETVGKKFE-KKHIEVFTDLSSPFSKDQLDIIIHNLRTSSISLQFFLPFPVGKEDGTGDR 178
Query: 150 MKNIVVRASLSGEPH-------------------MRVIIENDNLLNIFSKKSSAKTLFVD 190
+ +R+ G P M + D L I+S S + L V
Sbjct: 179 -GDSNLRSDHPGSPFPLKGITEQQKEGVQMVKRVMTALEGEDGLDEIYSFSESLRQLCV- 236
Query: 191 STTSLRGARKTRDISPVTI-FRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTD 249
+ I +I +R L + + I++ YK +E+ + S
Sbjct: 237 ----------FKKIERSSIPWRCQLTIGSNLSIEISAYKSIVQERI----RASWTVVDAR 282
Query: 250 KFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKL 308
+++ + Y +D VP E I+G+RYG ++P S + E +K+K E K +
Sbjct: 283 TLRKEDIQKETVYCLNDDDETEVPKEDTIQGFRYGSDIIPFSKVDQEQMKYKSEGKCFSV 342
Query: 309 LGFTDASNILRHYYMKDVNL-FIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQ 367
LGF +S + R Y+M L A + A VA+S+L A+ E++ VAIVR + + +
Sbjct: 343 LGFCRSSQVHRKYFMGSQVLKVFAAKDDEAAAVALSSLTHALDELDMVAIVRYAYDR-RS 401
Query: 368 SVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNL 427
+ VGV P + + + + LPF ED+R++ FPS K + P E Q A D L
Sbjct: 402 NPQVGVAFPCIKDTY---ECLVYVQLPFMEDLRQYMFPSL-KNNKKYTPTEAQLSAVDAL 457
Query: 428 VKMLDLAPSGKGEILQPEL-----TPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITE 482
+ ++L + E +L PNP +R + L + H PP+ + + +
Sbjct: 458 IDSMNLTKKDEEEDTIEDLFPTTKIPNPQFQRLFQCLLHRVLHPQERLPPVQQHVLNMLD 517
Query: 483 PDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRR---FLREKPSGSDEPNGDGSVSDAQA 539
P + A Q + F + E K K F GS+ + + A
Sbjct: 518 PPTEVTARCQMPLSKIKALFPLTEAIKRKNQLTAQDIFQDNHEEGSN--SKKFKTEEGGA 575
Query: 540 VNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGIN 599
S+ S V+V K+G ++P +DF ++ +++ ++A + N I L +NE
Sbjct: 576 HFSLSSLAKVSVTKVGSVSPAEDFRVLVRQKNAS--FEEASLQLINHIEQFL-GTNETPY 632
Query: 600 YPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKKLSLISKSEA 659
+ K+++ + A R+ I E ++FN+ L+ + + K+ + F++ ++ ++LI+K EA
Sbjct: 633 FMKSMDCIRAFREEAIQFSEYQRFNNFLKALREKVEKQ-LTHFWEIIIQDGITLITKDEA 691
Query: 660 VDSDITDDEAGSFIVKSQPKHED 682
S +T +EA F+ + + ED
Sbjct: 692 SGSSVTAEEAKKFLAPKENRSED 714
>gi|255080024|ref|XP_002503592.1| predicted protein [Micromonas sp. RCC299]
gi|226518859|gb|ACO64850.1| predicted protein [Micromonas sp. RCC299]
Length = 715
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 150/544 (27%), Positives = 237/544 (43%), Gaps = 90/544 (16%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MA + L++DVSPSMH L V SR++Q +++ + E +I FG++ET N++
Sbjct: 1 MATRKRCTALVVDVSPSMHPHLGPVGDHLSRVVQNRILNARIDEFALIAFGSDETNNDVH 60
Query: 61 KE-------VGGYEHVKVLQDIKVV---------DGHLVQSLKHLPQGTCAGDYM----- 99
E G ++ + ++I V +V SL+ + G+ DY+
Sbjct: 61 TEGLDAAAASGERDYEEEYRNIAVKVPMGCCSSESAEVVASLRGM-AGSAPSDYLEALVV 119
Query: 100 ---LIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVR 156
++ + + + L+TD P + +D + IAR M A +++ VVR
Sbjct: 120 ASDMLVNHQRGGAFLRRIMLVTDLRTPCE-----VDDDFIEDIARGMRAVDMQLTVAVVR 174
Query: 157 ASLSGEPHMRVIIEND------------NLLNIFSKKS----SAKTLFVDSTTSLRGARK 200
S + R+ E+ +LLN S K + ++ D +L+ A +
Sbjct: 175 GEESEDETTRIQEEDTVMANRETLQRLCDLLNEPSDKGPVAVTNRSCIEDHAAALQAA-Q 233
Query: 201 TRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDY 260
+ P T FRGDLE + M +KVWVYKK E K P +K YSD A V +
Sbjct: 234 VKTTKPTTTFRGDLEFTPWMSLKVWVYKKVSEAKPPAMKMYSDAA-DEAAGDDPTVGRER 292
Query: 261 EYKSVEDPSKV--VPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNIL 318
++S DP V PE I Y YGP +PI E + + +K +K+ GFT +
Sbjct: 293 VFRSYADPDAPVDVAPEMMISAYPYGPANIPIQDEVKELIAARNDKGMKIFGFTSLDQVP 352
Query: 319 RHYYMKDVNLFIAEPG-------------------NSRATVAVSALARAMKEMNKVAIVR 359
M + + + P + +AT A+SA+ARAM+ + A+VR
Sbjct: 353 HWMGMDEPRVLVPWPTKDGSLAAGMAASAGATDREHRKATEAMSAMARAMQRKGQAALVR 412
Query: 360 CVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSF------------ 407
VW Q V G LTP+++++ D F LPFAED+ F
Sbjct: 413 AVWTQNSDKVSFGALTPHITKEG---DFLLFVPLPFAEDMYSNDFKPLPVPGCKAAAQLG 469
Query: 408 SKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQD 467
+ P ++Q+ AA LV LD G G P NP+L R + + ++ ++
Sbjct: 470 ANAKAKLVPTDEQRAAAAALVDSLD----GSGP--DPWDCLNPSLTRTHALIAARATNEL 523
Query: 468 AAPP 471
AAPP
Sbjct: 524 AAPP 527
>gi|320164326|gb|EFW41225.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
Length = 699
Score = 162 bits (409), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 135/455 (29%), Positives = 216/455 (47%), Gaps = 61/455 (13%)
Query: 255 EVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDA 314
EV+ + Y ED V E + Y+YG +P SS + +K K + +LGFT A
Sbjct: 247 EVRRETSYFLQEDEETEVQKEDITRAYKYGKDFIPWSSVDESTMKLSSHKCLSVLGFTAA 306
Query: 315 SNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL 374
SNI R M + +PG++ A+ A+SA A+AM VAIVR V+R+ +V +G L
Sbjct: 307 SNIPRQLLMGGAVAVVPQPGDAVASKALSAFAQAMVLQKSVAIVRYVFREN-ANVRLGCL 365
Query: 375 TPNVSEKINIPDSFY--FNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD 432
P +S + FY +N LPFAED+RE+ F + + + P+ +Q + D L+ LD
Sbjct: 366 HPVIS-----AEHFYLLYNSLPFAEDMREYPFTTLHQ--KRYMPSAEQLKVVDGLIDKLD 418
Query: 433 LAPS------GKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPT 486
L + + L P+L+ NP L+R Y ++ ++ H D PPLD ++K P
Sbjct: 419 LTMAYHDQEGNAMDALHPKLSFNPVLQRVYQCVKQRALHPDDDIPPLDPLIEKYVNPSQD 478
Query: 487 LLAESQSAID----AFCGQFVIK----ENPKL--------------------KKSTRRFL 518
+ A +Q+ +D AF Q + + E KL + ++
Sbjct: 479 IFARAQAELDRVRQAFPLQVIERKEKDEAVKLWNEADAPVLNVDPVDLLGGASHAAKKVK 538
Query: 519 REKPSGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDK 578
E P G+ P S+S Q V ++G + PI+DF M+S + D V
Sbjct: 539 LENPDGNAGPVTLDSLSSGQ------------VMEVGSIDPIKDFRTMVSSK-TRDLVST 585
Query: 579 AIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRN 638
A+ MK +I L+ S + KA + L LR C+ E QFND + + + ++
Sbjct: 586 AVAQMKKRIIQLITESFGSNLFQKAFDCLKVLRIECVRSDESAQFNDFMGLLKQTTSNKH 645
Query: 639 FS----TFFDFLMSKKLSLISKSEAVDSDITDDEA 669
+ F+ ++ K++LIS EA DS++T ++A
Sbjct: 646 HNPQHYEFWQLIVKAKITLISSDEAYDSEVTPEQA 680
>gi|449506901|ref|XP_002191185.2| PREDICTED: X-ray repair cross-complementing protein 5 [Taeniopygia
guttata]
Length = 879
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 176/726 (24%), Positives = 332/726 (45%), Gaps = 76/726 (10%)
Query: 7 ALLLLLDVSPSMHSV-------LPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENEL 59
A++L LDV +M S L +K+ ++ +Q+++ EV V+LFGT T N+L
Sbjct: 161 AIVLCLDVGFTMSSSSPGEESSLDQAKKIMTKFLQRQVFAESKDEVAVVLFGTNGTRNDL 220
Query: 60 TKEVGGYEHVKVLQDIKVVDGHLVQSLKH-LPQGTCAGDYM--------LIKK--YGETY 108
E Y+++ V + + + D L++ +++ + G+ D++ L+++ G+ Y
Sbjct: 221 ASE-DQYQNITVHRSLMLPDFDLLEDIQNVIKAGSEQADFLDAIIVCMDLLQRQTIGKKY 279
Query: 109 KGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV-VRASLSGEPHMRV 167
+ K+H+ L TD P+ EDQ+ I + + ++ + S+ G
Sbjct: 280 E-KRHIELFTDLSSPVS-------EDQLGIIIANLKKTEISLQFFLPFPVSVEGTGDTSA 331
Query: 168 IIENDNLLNIFSKKSSA-----------KTLF-VDSTTSLRGARKTRD-ISPVTIFR--- 211
+ N F K K ++ +D L R+ + +++F+
Sbjct: 332 SVHAHMHKNSFPIKGLTEQQKQGIDVVRKLMYTLDEEGGLEEIYTFRESLERLSMFKKIE 391
Query: 212 -------GDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKS 264
L + + I++ YK EE + D +V+ + Y
Sbjct: 392 RKPMPWPCQLTIGPDLSIRIVAYKSVTEENVKKVWAVVD----AKTLRKEDVQKETVYCL 447
Query: 265 VEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNILRHYYM 323
+D V + I+G+RYG +VP S + E +K+K E K +LGFT +S I RHYYM
Sbjct: 448 NDDDETEVQKDDTIQGFRYGSDIVPFSKEDEEQMKYKTEAKCFSVLGFTRSSQIQRHYYM 507
Query: 324 KDVNL-FIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKI 382
+ L A G+ A VA SAL RA+ E+ VA+VR + + + + +GV P + +
Sbjct: 508 GNQALKVFAAKGDENAAVAFSALVRALDELKMVAVVRYAYDR-RCNPQIGVAFPYIKDAY 566
Query: 383 NIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGE-- 440
+ + LP+ ED+R++ F S K + P Q A D+L+ ++L GE
Sbjct: 567 ---ECLIYVQLPYMEDLRQYVFSSL-KNSKKYFPTVDQLSAVDSLIDSMNLVHE-DGETF 621
Query: 441 --ILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAF 498
+ +P PNP +R Y L+ K+ + D PP++ + ++ E + Q+ ++
Sbjct: 622 EDLFKPSKIPNPRFQRLYQCLQHKAFYPDKPLPPIEQHILEMLEMPCVVRERCQAPLERV 681
Query: 499 CGQFVIKENPKLKK--STRRFLREKPSGSDEPN-GDGSVSDAQAVNSMESKPVVTVDKIG 555
F +KE K K+ + + ++ DEP+ + D + S+ + +G
Sbjct: 682 KALFPLKEVGKKKEEKTAQDIFKD---NEDEPSLKKPKIEDEEESFSIMKLAEGNITSVG 738
Query: 556 DLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCI 615
+ P +DF ++ +++ D+ D + + + N+I LEN Y K ++ + R+ +
Sbjct: 739 SVNPAEDFRILVRKKNA-DFKDVS-QQLINRIDQFLENKGSQY-YMKGMDCIRVFREEAM 795
Query: 616 LEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKKLSLISKSEAVDSDITDDEAGSFIVK 675
+ + FND L+ + + S F++ ++ +++SLI+K EA S +T +EA F+
Sbjct: 796 KLSKVQCFNDFLQALKSKLEDKALSDFWEIMVQERISLITKDEAEGSLVTGEEAKEFLAP 855
Query: 676 SQPKHE 681
+ K+E
Sbjct: 856 KEQKNE 861
>gi|298711254|emb|CBJ26499.1| ku P80 DNA helicase, putative [Ectocarpus siliculosus]
Length = 496
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 135/491 (27%), Positives = 241/491 (49%), Gaps = 38/491 (7%)
Query: 32 LIQKKLIYGKNHEVGVILFGTEETE--NELTK-EVGGYEHVK---VLQDIKVVDGHLVQS 85
L+ +K++ K HEVGV+LFG E E N+L + E Y VK +L V V++
Sbjct: 15 LMVQKMLQSKQHEVGVVLFGLPEAETANQLNEAETSDYLGVKEYCLLDKGSVAVLRKVEA 74
Query: 86 LKHLPQGTCAG----DYMLIKKY---GETYKGK--KHLCLITDALCPLKDPD-----VGT 131
+ G A D M++ + T K K +H+ L+TDA P+ + VG
Sbjct: 75 MNVPDSGEPATGDLLDAMVVGMHMIRSRTLKKKYIRHVYLLTDAATPVAEVSQLGDIVGM 134
Query: 132 KEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDS 191
D + FG + + E V +N+ +L + + + +
Sbjct: 135 YTDPTMECRLHFIGFG--------HGAPAEEGGGTVKEQNEKMLASVAAATRGTVVPAQT 186
Query: 192 TTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKA--PSTD 249
L G + +PV + + DL L + + +KKT +LKK S + P+
Sbjct: 187 VVDLMGESTIKTTNPV-LSKVDLSLGTNLTLHCRFFKKTDTGLKESLKKESIASYDPAGG 245
Query: 250 KFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEK-SVKL 308
+ +V+VD Y+ E P V E ++KG+RYG +P++S + ++K E S+K+
Sbjct: 246 SGSDGKVRVDKTYRDPEMPEVEVDFEHQVKGFRYGQDYIPVNSVDEGSLKLPDEPPSLKV 305
Query: 309 LGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQS 368
LGFT +S++ RH+YM D + ++EPG+ +A A+S+L+ AM+ +++VA+ R V R+ +
Sbjct: 306 LGFTPSSSVERHFYMDDTFVLLSEPGSGQAAGAISSLSSAMRNLDQVAVARFVRRKSGEP 365
Query: 369 VVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV 428
+G+L P+ S + + F +PF EDVR F FPS +K P S P+++Q+ + +LV
Sbjct: 366 -WLGILIPD-STGVVPTERLLFQKIPFIEDVRAFNFPSLAKPPPSRTPSDEQKRVSASLV 423
Query: 429 KMLDLAPSGKGEI---LQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDP 485
+ + + P G + ++ L +P + ++ + P ++ S++ P+P
Sbjct: 424 EAM-MIPELDGNMQGGVRGGLVLDPVRQGINGAKVARAMDPECELPDVNPSVRAALAPEP 482
Query: 486 TLLAESQSAID 496
LL ++S ++
Sbjct: 483 QLLDRAKSVLE 493
>gi|47226323|emb|CAG09291.1| unnamed protein product [Tetraodon nigroviridis]
Length = 727
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 176/740 (23%), Positives = 322/740 (43%), Gaps = 95/740 (12%)
Query: 5 REALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETEN 57
+ AL+L +DV SM + P E K+ + +Q+++ E+G++LFGT+ T N
Sbjct: 1 QSALMLCMDVGFSMSNSAPGEEPPFELAKKIIQKFVQRQVFAESKDELGLVLFGTDSTNN 60
Query: 58 ELTKEVGGYEHVKVLQDIKVVDGHLVQSLKH-LPQGTCAGDYM-----LIKKYGETYKGK 111
L ++ G YE++ V +++ V D L++ +++ L D+M + GK
Sbjct: 61 LLHQD-GQYENISVFRELSVPDFDLLEQIQNQLQPENQQADWMDALVVCMDLLQRARTGK 119
Query: 112 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV-------------VRAS 158
K+ L + L D ++ DQ+ I + + + + ++ + S
Sbjct: 120 KYDRL---NIVQLTDLNIQASSDQLDIIIQNLKSSDITLQFFLPFPAEDDEDGGGDGPRS 176
Query: 159 LSGEPH-------------------MRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGAR 199
SG P M + E+D L I++ +++ + L + R
Sbjct: 177 ESGHPGRGKGLSRDQKEGLDMMKHIMLSLDEDDGLDQIYTFRNAIEQLRMFKQIERR--- 233
Query: 200 KTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVD 259
P+ + L + + I++ YK +EK D + + +K +
Sbjct: 234 ------PMA-WPCLLTVGSCVSIRIVGYKAVMQEKLKKTWMTVDAQTNQKEV----IKRE 282
Query: 260 YEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNIL 318
Y +D V + I+G+RYG +VP S + E +K+K + K +LGFT + +
Sbjct: 283 TVYCLDDDNETEVQVTETIQGFRYGSDIVPFSKVDQEQMKYKHDGKCFAVLGFTKQNLVH 342
Query: 319 RHYYMKD--VNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTP 376
RH ++ + + LF A+ + A VA+SAL RA++E+ VAIVR + + + + VG P
Sbjct: 343 RHQFIGNQVIKLFAAK-DDEHAGVALSALIRALRELEMVAIVRYAYDR-RSNPQVGAAFP 400
Query: 377 NVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPS 436
+ + + + LPF ED+R+F FPSF V+ P E Q A D+L+ + L
Sbjct: 401 CIKQHY---ECLMYIQLPFVEDLRQFSFPSFDNKKVT--PTETQLSAVDSLIDSMMLVEE 455
Query: 437 GKG----EILQPELTPNPALERFYHHLELKSEHQDAAPP-----PLDDSLKKITEPDPTL 487
G ++ + PNP +R + L+ K H P P++ LK + +
Sbjct: 456 GDDGKPKDMFKVHHIPNPEFQRLFQVLKPKCLHHRVVNPGTPLPPIEPWLKAVLGRPDVI 515
Query: 488 LAESQSAIDAFCGQFVIKENPK---LKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNSME 544
Q+ ++ F + + K LK S F ++ S EP+G + D +
Sbjct: 516 GQRCQAPLEELKRVFPLTQVEKKKNLKTSAEVFGKD----SGEPDGKKAKHDEEEEEEDF 571
Query: 545 SKPVVT---VDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYP 601
+ +T + +G + P +DF ++ ++ P + + + +I LL N N Y
Sbjct: 572 NLANITEGSITSVGSVDPARDFCFLVKQKSIP--FGEVCQQLIQRIEQLLSNRNTEY-YT 628
Query: 602 KAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKKLSLISKSEAVD 661
K++ + A R+ + +N+ L+ + R F+D L+ L+LIS +
Sbjct: 629 KSITGIQAFREQSVKLGNADLYNNYLQSLKGSITNRQLEVFWDLLVQDGLTLISNDQVKG 688
Query: 662 SDITDDEAGSFIVKSQPKHE 681
S I + EA F+V + K E
Sbjct: 689 SAIFNAEANQFLVGVEKKEE 708
>gi|154301924|ref|XP_001551373.1| hypothetical protein BC1G_10199 [Botryotinia fuckeliana B05.10]
Length = 864
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 174/688 (25%), Positives = 299/688 (43%), Gaps = 81/688 (11%)
Query: 41 KNHEVGVILFGTEETENEL-TKEVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGD 97
K VG++ F T+ET+NEL + GY ++ VL+ + ++ +K P T GD
Sbjct: 48 KTDGVGIVGFRTDETDNELHSSGEEGYANISVLKQLGQFQMQQLEEVKEAVKPSDTDDGD 107
Query: 98 YM--------LIKKYGETYKGK-----KHLCLITDALCPLKDPDVGTKEDQVSTIARQMV 144
+ +IKK+ GK + + LITD + ++ +++ ++V
Sbjct: 108 AISAIVVAMEMIKKHTTLKSGKPGKYARKIVLITDGNGFMNSEELDDIAKEINNNDIRLV 167
Query: 145 AFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRG-----AR 199
G+ + E V EN+ LL F++K S +F + ++ +
Sbjct: 168 VIGVDFDD--AEYGFKEEDKDLVKSENEKLLRSFTEKCS-DGIFGTTAEAIEALATPVVK 224
Query: 200 KTRDISPVT--IFRGDLEL--SEKMKIKVWVYKKTGEEKFPTLKKYSDKA---------P 246
TR+ + T + GD++ M I V Y +T + K + K Y D+ P
Sbjct: 225 VTREYNTYTGPLILGDVKKYPETAMSIDVARYFRTKQAKPVSAKSYVDRVTDEPIDVDLP 284
Query: 247 STDKFATHEVKVDYEYKSVEDPS--KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEK 304
+TD + Y+ P K V + +GY YG +VPIS ++ K + K
Sbjct: 285 NTDDLTSVTQARTYKVNDTTAPGGKKDVEKDALERGYEYGSTIVPISQSDESITKLQTIK 344
Query: 305 SVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQ 364
++GF ++ R+ M + + IA+ N +A +A+S+L A+ E++ A+ R V +
Sbjct: 345 DFSIMGFV-PNDYERYLNMGESCITIAQKTNEKARMALSSLIHALHELDSCAVARIVKKD 403
Query: 365 GQQSVVV---GVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK-FPVSWQ----- 415
G ++V ++ P + I++P LPFAEDVR ++F K F S
Sbjct: 404 GSDPLIVLLAPLIEPGLEGLIDVP-------LPFAEDVRAYRFAPLDKVFNSSGGIMEKH 456
Query: 416 ---PNEQQQEAADNLVKMLDLAPSGKGEILQP------ELTPNPALERFYHHLELKSEHQ 466
P+ + A V +DL+ +GK + +P E T +P L R + ++
Sbjct: 457 KNLPSNDLKAAMSKFVDSMDLSTAGKNDEGEPAEYMAIEDTYSPVLHRISQAIRRRAVKP 516
Query: 467 DAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSD 526
D PP D L K + P L+ +S I+ +K+ P + K+ R KP
Sbjct: 517 DEGIPPPPDVLTKWSHPPTELVEKSSGQIEKLIRIADVKKVPAITKAKRNREVVKPI--- 573
Query: 527 EPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNK 586
S D +A+ E + +TV+ I +F+ +S D D V K +M +
Sbjct: 574 ------SGLDVEALLGREKRQKITVE-----NAIPEFKRALSSTDSTDSVVKVTREMGDT 622
Query: 587 IFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTF--FD 644
+ LL+ S + +A E L +R I EP +N+ +EK K + +F + FD
Sbjct: 623 VRTLLKRSTGDSTWGQAGEYLRTMRTELIELIEPDIYNNFIEKFKKQLQNGDFDKYFWFD 682
Query: 645 FLMSKKLSLISKSEAVDSDITDDEAGSF 672
+ KL LI EA +++ ++DEA F
Sbjct: 683 VVRKNKLGLIHGGEAENTERSEDEARKF 710
>gi|347836338|emb|CCD50910.1| similar to ATP-dependent DNA helicase II subunit 2 [Botryotinia
fuckeliana]
Length = 724
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 174/688 (25%), Positives = 299/688 (43%), Gaps = 81/688 (11%)
Query: 41 KNHEVGVILFGTEETENEL-TKEVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGD 97
K VG++ F T+ET+NEL + GY ++ VL+ + ++ +K P T GD
Sbjct: 48 KTDGVGIVGFRTDETDNELHSSGEEGYANISVLKQLGQFQMQQLEEVKEAVKPSDTDDGD 107
Query: 98 YM--------LIKKYGETYKGK-----KHLCLITDALCPLKDPDVGTKEDQVSTIARQMV 144
+ +IKK+ GK + + LITD + ++ +++ ++V
Sbjct: 108 AISAIVVAMEMIKKHTTLKSGKPGKYARKIVLITDGNGFMNSEELDDIAKEINNNDIRLV 167
Query: 145 AFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRG-----AR 199
G+ + E V EN+ LL F++K S +F + ++ +
Sbjct: 168 VIGVDFDD--AEYGFKEEDKDLVKSENEKLLRSFTEKCS-DGIFGTTAEAIEALATPVVK 224
Query: 200 KTRDISPVT--IFRGDLEL--SEKMKIKVWVYKKTGEEKFPTLKKYSDKA---------P 246
TR+ + T + GD++ M I V Y +T + K + K Y D+ P
Sbjct: 225 VTREYNTYTGPLILGDVKKYPETAMSIDVARYFRTKQAKPVSAKSYVDRVTDEPIDVDLP 284
Query: 247 STDKFATHEVKVDYEYKSVEDPS--KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEK 304
+TD + Y+ P K V + +GY YG +VPIS ++ K + K
Sbjct: 285 NTDDLTSVTQARTYKVNDTTAPGGKKDVEKDALERGYEYGSTIVPISQSDESITKLQTIK 344
Query: 305 SVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQ 364
++GF ++ R+ M + + IA+ N +A +A+S+L A+ E++ A+ R V +
Sbjct: 345 DFSIMGFV-PNDYERYLNMGESCITIAQKTNEKARMALSSLIHALHELDSCAVARIVKKD 403
Query: 365 GQQSVVV---GVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK-FPVSWQ----- 415
G ++V ++ P + I++P LPFAEDVR ++F K F S
Sbjct: 404 GSDPLIVLLAPLIEPGLEGLIDVP-------LPFAEDVRAYRFAPLDKVFNSSGGIMEKH 456
Query: 416 ---PNEQQQEAADNLVKMLDLAPSGKGEILQP------ELTPNPALERFYHHLELKSEHQ 466
P+ + A V +DL+ +GK + +P E T +P L R + ++
Sbjct: 457 KNLPSNDLKAAMSKFVDSMDLSTAGKNDEGEPAEYMAIEDTYSPVLHRISQAIRRRAVKP 516
Query: 467 DAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSD 526
D PP D L K + P L+ +S I+ +K+ P + K+ R KP
Sbjct: 517 DEGIPPPPDVLTKWSHPPTELVEKSSGQIEKLIRIADVKKVPAITKAKRNREVVKPI--- 573
Query: 527 EPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNK 586
S D +A+ E + +TV+ I +F+ +S D D V K +M +
Sbjct: 574 ------SGLDVEALLGREKRQKITVE-----NAIPEFKRALSSTDSTDSVVKVTREMGDT 622
Query: 587 IFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTF--FD 644
+ LL+ S + +A E L +R I EP +N+ +EK K + +F + FD
Sbjct: 623 VRTLLKRSTGDSTWGQAGEYLRTMRTELIELIEPDIYNNFIEKFKKQLQNGDFDKYFWFD 682
Query: 645 FLMSKKLSLISKSEAVDSDITDDEAGSF 672
+ KL LI EA +++ ++DEA F
Sbjct: 683 VVRKNKLGLIHGGEAENTERSEDEARKF 710
>gi|345797322|ref|XP_536061.3| PREDICTED: X-ray repair cross-complementing protein 5 [Canis lupus
familiaris]
Length = 829
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 169/748 (22%), Positives = 322/748 (43%), Gaps = 103/748 (13%)
Query: 2 ARTREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEE 54
+R++ A++L +DV +M + P E K+ + +Q+++ E+ ++LFGT+
Sbjct: 100 SRSKAAVVLCMDVGSAMGNSFPGEESPFELAKKVITMFVQRQVFAESRDEIALVLFGTDG 159
Query: 55 TENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDYM--LI--------KK 103
TEN L + Y+++ V + + + D L++ ++ Q G+ D++ LI +
Sbjct: 160 TENALAGK-DQYQNITVHRHLMLPDFDLLEDIERKIQPGSQQADFLDALIVCMDVIQQET 218
Query: 104 YGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNI----VVRASL 159
G+ ++ K+H+ + TD P +DQ+ I + FG+ ++ + +
Sbjct: 219 VGKKFE-KRHIEVFTDLSSPFS-------KDQLDVIIHNLKKFGISLQFFLPFPIGKEDG 270
Query: 160 SGEPH--------------------------------MRVIIENDNLLNIFSKKSSAKTL 187
+G+P MR + D L I+S S + L
Sbjct: 271 TGDPGDGNSRSDHQGSSFPLKGITEQQKEGIRMVKKVMRSLEGEDGLDEIYSFSESLRQL 330
Query: 188 FVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPS 247
V + K P T L + + IK+ YK +EK K
Sbjct: 331 CV-----FKKIEKHSIPWPCT-----LTIGSSLSIKIVAYKSIIQEKV----KKGWTVVD 376
Query: 248 TDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSV 306
+++ + Y +D VP E I+G+RYG +VP S + E +K+K E K
Sbjct: 377 ARTLKKEDLQKETVYCLNDDNETEVPKEDTIQGFRYGSDIVPFSKVDEEHMKYKLEGKCF 436
Query: 307 KLLGFTDASNILRHYYMKDVNL-FIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQG 365
+LGF +S + R Y+M + L A + A VA+S+L A+ E++ VA+VR + +
Sbjct: 437 SVLGFCRSSQVHRRYFMGNQVLKVFAAKDDEAAAVALSSLIHALDELDMVAVVRYAYDR- 495
Query: 366 QQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAAD 425
+ VG+ P + ++ + + LPF ED+R++ F SF K P E Q A D
Sbjct: 496 RSHPQVGMAFPFIK---DVYECLIYVQLPFMEDLRQYMFSSF-KNNKKCTPTEAQLSAVD 551
Query: 426 NLVKMLDLAPSGKGEILQPEL-----TPNPALERFYHHLELKSEHQDAAPPPLDDSLKKI 480
L+ + L + + +L PNP +R + L ++ H PP+ + +
Sbjct: 552 ALIDSMSLIKKDEKDDTIEDLFPTSKIPNPQFQRLFQCLLHRALHPQEPLPPIQPHILSM 611
Query: 481 TEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRR---FLREKPSGSDEPNGDGSVSDA 537
+P + + Q + F + E K K F G D + +
Sbjct: 612 LDPPTEVTTKCQVPLSKIKTIFPLTEVIKKKDQVTAQDIFQDNHEEGPD--SKKLKTEEG 669
Query: 538 QAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLE---NS 594
+ S+ S +V +G + P ++F ++ ++ E+ ++ +E ++
Sbjct: 670 EPCFSISSLAEGSVTSVGSVNPAENFRVLVRQKKA------TFEEASCQLISRIEQFLDT 723
Query: 595 NEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKKLSLI 654
NE + K+++ + R+ I E ++FND L+ + + + + F++ ++ ++LI
Sbjct: 724 NETPYFMKSMDCITVFRQEAIQFSEEQRFNDFLKALREKVEMKQLNHFWEIVIQDGITLI 783
Query: 655 SKSEAVDSDITDDEAGSFIVKSQPKHED 682
+K EA S +T +EA F+ +P +ED
Sbjct: 784 TKDEAPGSSVTAEEAKQFLAPKEPPNED 811
>gi|148228702|ref|NP_001081127.1| X-ray repair complementing defective repair in Chinese hamster
cells 5 [Xenopus laevis]
gi|50415233|gb|AAH77439.1| Xrcc5-A-prov protein [Xenopus laevis]
Length = 726
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 176/736 (23%), Positives = 332/736 (45%), Gaps = 81/736 (11%)
Query: 1 MART-REALLLLLDVSPSM-------HSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGT 52
MAR + A++L +DV +M S +K+ +Q+++ E+ V+L+GT
Sbjct: 1 MARAAKSAVVLCMDVGLAMSHSNQGKESPFEQAKKVMMLFLQRQVFAESKDEIAVVLYGT 60
Query: 53 EETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDYM--------LIKK 103
+ T+N L +E YE++ V + + + D L++ ++++ + G+ D++ L++K
Sbjct: 61 DTTDNALARE-DQYENISVHRHLMLPDFDLLEQIENVVEPGSVQADFLDALIVSMDLLQK 119
Query: 104 --YGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSG 161
G+ Y + H+ + +D P V E ++ + + + + V G
Sbjct: 120 ETLGKKYT-RLHIAVFSDLSSPFS---VDQLEVIIANLKKAEITLQFFLPFSVDEEEFGG 175
Query: 162 EPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKT-------RDISPVTIFRGDL 214
+ R N + K L + RK +S V FR L
Sbjct: 176 SSNNR-----GNAGSSDRGCGPGKGLSDQQKEGIEMVRKIMFSLDGEEGLSEVFTFRDSL 230
Query: 215 E--------------------LSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATH 254
E + + I++ YK EEK K ++ T K
Sbjct: 231 ERLSIFKKIERRPMPWPCQLTVGSSLSIRIVGYKSVTEEKVK--KTWTHIDAKTHK--KE 286
Query: 255 EVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTD 313
++K + Y D V + I+G+RYG +VP S + E +K+K E K +LGFT
Sbjct: 287 DIKKETVYCLNNDEETEVEKDDTIQGFRYGSDIVPFSKVDQEQMKYKSEGKCFAVLGFTK 346
Query: 314 ASNILRHYYMKDVNLFIAEPGNSR-ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVG 372
+S +L + ++ + + + P + A+VA+SAL A+ EM+ VAIVR V+ + + + VG
Sbjct: 347 SSMVLSNQFVGNQVIRMFAPSDDEAASVALSALIHALDEMDMVAIVRYVYDR-RSNPQVG 405
Query: 373 VLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD 432
V P++ +K + + LPF ED+R++ F S K + P E Q A D+L+ +
Sbjct: 406 VAFPHIKDKY---ECLVYVQLPFMEDIRQYLFSSL-KNNKKFTPTESQNSAIDSLIDSMS 461
Query: 433 LA---PSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLA 489
L K ++ + PNP +R + L+ K+ + ++ PP+D L + E +
Sbjct: 462 LIYDDGETKEDLFKTSKLPNPQFQRLFQCLQHKALNPESPLPPIDQHLLDMLETPVEVKE 521
Query: 490 ESQSAIDAFCGQFVIKENPKLK--KSTRRFLREKPSGSDEPNGDGSVSDAQAVNSMESKP 547
+ + F ++E K K K+ +K +DEP+ D + S+
Sbjct: 522 ACMAPLATVKACFPLQEATKRKEVKTADEIFTKK---TDEPDAKKLKEDDEGF-SLLRLA 577
Query: 548 VVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIED-MKNKIFGLLENSNEGINYPKAVEL 606
V +G + P QDF+A++ +++ D+ K + D + +I+ L + + Y K++
Sbjct: 578 DGNVTSVGSVNPDQDFQALLRQKNT-DF--KHVSDQLIKRIYECL-DVKQTQYYMKSILC 633
Query: 607 LVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKKLSLISKSEAVDSDITD 666
+ R+ I + + FND L+ + + F+D ++ +++SLI+ SE+ S +T
Sbjct: 634 IKTFREEAIKLSQVRLFNDFLQLLKQKVDGSALMEFWDIIVQEEISLITSSESKGSSVTP 693
Query: 667 DEAGSFIVKSQPKHED 682
+EA F+ + + K E+
Sbjct: 694 EEAKQFLAQKEEKVEE 709
>gi|301755794|ref|XP_002913725.1| PREDICTED: x-ray repair cross-complementing protein 5-like
[Ailuropoda melanoleuca]
Length = 733
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 177/750 (23%), Positives = 328/750 (43%), Gaps = 103/750 (13%)
Query: 1 MART--REALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFG 51
MAR+ + A++L +DV P+M + L E K+ + +Q+++ E+ ++LFG
Sbjct: 1 MARSGSKAAVVLCMDVGPAMSNSLAGEESPFELAKKVMTMFLQRQVFAESRDEIALVLFG 60
Query: 52 TEETENELTKEVGG---YEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDYM-------- 99
T+ TEN L GG Y+++ V + + + D L++ ++ Q + D++
Sbjct: 61 TDGTENAL----GGKDQYQNITVHRHLMLPDFDLLEDIERKIQPSSQQADFLDALVVCMD 116
Query: 100 LIKK--YGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV--- 154
+I++ G+ ++ KKH+ + TD P +DQ+ I + FG+ ++ +
Sbjct: 117 MIQRETVGKKFE-KKHIEVFTDLSSPFS-------KDQLDVIIHNLKKFGISLQFFLPFP 168
Query: 155 ------VRASLSGEPH---------MRVIIEN------------------DNLLNIFSKK 181
G H ++ I E D L I+S
Sbjct: 169 VGKEDGTGDRGDGNSHSDHHGPSFPLKGITEQQKEGIRMVKKVMLSLEGEDGLDEIYSFS 228
Query: 182 SSAKTLFVDSTTSLRGARKTRDIS-PVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKK 240
S + L V +TR + P T L + + I + YK +E+ K
Sbjct: 229 ESLRQLCVFKKI------ETRSVPWPCT-----LTIGSNLSINIVAYKSIVQERV----K 273
Query: 241 YSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKF 300
S +++ + Y +D VP E I+G+RYG +VP S + E +K+
Sbjct: 274 KSWTVVDAQTLKKEDLQKETIYCLNDDNETEVPKEDTIQGFRYGSDIVPFSKVDEEHMKY 333
Query: 301 KPE-KSVKLLGFTDASNILRHYYMKDVNL-FIAEPGNSRATVAVSALARAMKEMNKVAIV 358
K E K +LGF +S + R Y+M + L A + A VA+S+L A+ E+ VA+V
Sbjct: 334 KSEGKCFSVLGFCRSSQVHRRYFMGNQVLKVFAAKDDEAAAVALSSLIHALDELAMVAVV 393
Query: 359 RCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNE 418
R V+ + + + VG+ P + + + + LPF ED+R++ F S K + P E
Sbjct: 394 RYVYDR-RANPQVGMAFPYIKDAY---ECLIYVQLPFMEDLRQYMFSSL-KNNKKYIPTE 448
Query: 419 QQQEAADNLVKMLDLAPSGKGEILQPEL-----TPNPALERFYHHLELKSEHQDAAPPPL 473
Q A D L+ + L + E +L PNP +R + L ++ H PP+
Sbjct: 449 AQLSAVDALIDSMSLVKKDEKEDTIEDLFPTSKIPNPQFQRLFQCLLHRALHPQEPLPPI 508
Query: 474 DDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLK-KSTRRFLREKPSGSDEPNGDG 532
+ + +P + A+ Q + F + E K K + T + + + +
Sbjct: 509 QQHILNMLDPPTEVTAKCQIPLSKIKTAFPLTEAIKKKDQVTAQNIFQDNHEEGPTSKKL 568
Query: 533 SVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLE 592
+ +A S+ S +V +G + P ++F ++ ++ ++A + N I L
Sbjct: 569 KTEEREACFSISSLAEGSVTSVGSVNPAENFRVLVRQKKAT--FEEASRQLINCIEQFL- 625
Query: 593 NSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKKLS 652
++NE + K+++ + RK I E ++FND L+ + + + + F++ ++ ++
Sbjct: 626 DTNETPYFMKSMDCITVFRKEAIQFSEEQRFNDFLKALREKVEMKQLNHFWEIVVQDGIT 685
Query: 653 LISKSEAVDSDITDDEAGSFIVKSQPKHED 682
LI+K EA S IT +EA F+ + ED
Sbjct: 686 LITKDEAPGSSITAEEAKKFLAPKENPSED 715
>gi|4630799|dbj|BAA76954.1| human Ku80 autoantigen homologue [Xenopus laevis]
Length = 726
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 176/736 (23%), Positives = 331/736 (44%), Gaps = 81/736 (11%)
Query: 1 MART-REALLLLLDVSPSM-------HSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGT 52
MAR + A++L +DV +M S +K+ +Q+++ E+ V+L+GT
Sbjct: 1 MARAAKSAVVLCMDVGLAMSHSNQGKESPFEQAKKVMMLFLQRQVFAESKDEIAVVLYGT 60
Query: 53 EETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDYM--------LIKK 103
+ T+N L +E YE++ V + + + D L++ ++++ + G+ D++ L++K
Sbjct: 61 DTTDNALARE-DQYENISVHRHLMLPDFDLLEQIENVVEPGSVQADFLDALIVSMDLLQK 119
Query: 104 --YGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSG 161
G+ Y + H+ + +D P V E ++ + + + + V G
Sbjct: 120 ETLGKKYT-RLHIAVFSDLSSPFS---VNQLEVIIANLKKAEITLQFFLPFSVDEEEFGG 175
Query: 162 EPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKT-------RDISPVTIFRGDL 214
+ R N + K L + RK +S V FR L
Sbjct: 176 SSNNR-----GNAGSSDRGCGPGKGLSDQQKEGIEMVRKIMFSLDGEEGLSEVFTFRDSL 230
Query: 215 E--------------------LSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATH 254
E + + I++ YK EEK K ++ T K
Sbjct: 231 ERLSIFKKIERRPIPWPFQLTVGSSLSIRIVGYKSVTEEKVK--KTWTHIDAKTHK--KG 286
Query: 255 EVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTD 313
++K + Y D V + I+G+RYG +VP S + E +K+K E K +LGFT
Sbjct: 287 DIKKETVYCLNNDEETEVEKDDTIQGFRYGSDIVPFSKVDQEQMKYKSEGKCFAVLGFTK 346
Query: 314 ASNILRHYYMKDVNLFIAEPGNSR-ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVG 372
+S +L + ++ + + + P + A+VA+SAL A+ EM+ VAIVR V+ + + + VG
Sbjct: 347 SSMVLSNQFVGNQVIRMFAPSDDEAASVALSALIHALDEMDMVAIVRYVYDR-RSNPQVG 405
Query: 373 VLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD 432
V P++ +K + + LPF ED+R++ F S K + P E Q A D+L+ +
Sbjct: 406 VAFPHIKDKY---ECLVYVQLPFMEDIRQYLFSSL-KNNKKFTPTESQNSAIDSLIDSMS 461
Query: 433 LA---PSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLA 489
L K ++ + PNP +R + L+ K+ + ++ PP+D L + E +
Sbjct: 462 LIYDDGETKEDLFKTSKLPNPQFQRLFQCLQHKALNPESPLPPIDQHLLDMLETPVEVKE 521
Query: 490 ESQSAIDAFCGQFVIKENPKLK--KSTRRFLREKPSGSDEPNGDGSVSDAQAVNSMESKP 547
+ + F ++E K K K+ +K +DEP+ D + S+
Sbjct: 522 ACMAPLAKVKACFPLQEATKRKEVKTADEIFTKK---TDEPDAKKLKEDDEGF-SLLRLA 577
Query: 548 VVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIED-MKNKIFGLLENSNEGINYPKAVEL 606
V +G P QDF+A++ +++ D+ K + D + +I+ L + + Y K++
Sbjct: 578 DGNVTSVGSANPDQDFQALLRQKNT-DF--KHVSDQLIKRIYECL-DVKQTQYYMKSILC 633
Query: 607 LVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKKLSLISKSEAVDSDITD 666
+ R+ I + + FND L+ + + F+D ++ +++SLI+ SE+ S +T
Sbjct: 634 IKTFREEAIKLSQVRLFNDFLQLLKQKVDGSALMEFWDIIVQEEISLITSSESKGSSVTP 693
Query: 667 DEAGSFIVKSQPKHED 682
+EA F+ + + K E+
Sbjct: 694 EEAKQFLAQKEEKVEE 709
>gi|294948884|ref|XP_002785943.1| ATP-dependent DNA helicase 2 subunit, putative [Perkinsus marinus
ATCC 50983]
gi|239900051|gb|EER17739.1| ATP-dependent DNA helicase 2 subunit, putative [Perkinsus marinus
ATCC 50983]
Length = 621
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 146/620 (23%), Positives = 269/620 (43%), Gaps = 91/620 (14%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEK--------------LCSRLIQKKLIYG-KNHEV 45
MA ++ +LLLDV +M P + IQ+KLI G K+ +V
Sbjct: 1 MASRKKYYVLLLDVGRTMSDTCPSTSQQPQAGRTKMDLAIEAAKLFIQQKLILGGKSTQV 60
Query: 46 GVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGT-----------C 94
++L G++ T N L + GGY++++V++D+ V D ++ L + G+
Sbjct: 61 ALVLIGSQRTRNRL--QHGGYQNIEVIKDLAVPDIDFLRCLTSIDYGSPYTADVVGGLIV 118
Query: 95 AGDYMLIKKYGETYKGKKHLCLITDALCPLKD----PDVGTKEDQVSTIARQMVAFGLRM 150
A D + + ++ + ++TD P++ P + + ++++ + + FG +
Sbjct: 119 ALDMIHSATEKSKARSQRTVLILTDGCTPVQGAADLPSIVQRMNEIN-VEPIIATFGTPL 177
Query: 151 KNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIF 210
P + ++E+ + ++ + L ++ L +++D ++
Sbjct: 178 ------------PEVHAVLES-----VAARSEKGQYLQEEALFELLTQVRSKDTQQISKC 220
Query: 211 RGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDP-S 269
R DLEL++ MKI +W Y KT + PTLKK S + VK+D Y +V+DP
Sbjct: 221 RVDLELTKYMKIPIWCYLKTSKVTLPTLKKESTHTSAA-------VKMDRVYYAVDDPDG 273
Query: 270 KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYM-KDVNL 328
+ +P E+R K Y+YG Q V + ++K+ +K + +LGF + I + + +
Sbjct: 274 EAIPAEERAKAYKYGSQFVRFEPYDEASLKYHSDKCLTMLGFARSETIPEELMIGESIEC 333
Query: 329 FIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSF 388
AEP N A A+S+L +AM M + R +R + V L P++SE+
Sbjct: 334 VAAEPNNVDAAKALSSLIKAMDAMGVYMLARYCFRNDVKPKYV-CLAPHISERHT---CL 389
Query: 389 YFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGK-GEILQPELT 447
Y N LP+++DVR +++ A D L+ +DL G E+L+ +
Sbjct: 390 YMNQLPYSDDVRT---DGIIFDDFDTDLTDKETIAIDRLMDSMDLEDDGDYHELLKMKQI 446
Query: 448 PNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKEN 507
NP L RF+ + ++E +A +D + P+ + A ++A F + +
Sbjct: 447 FNPTLLRFWRTVVRRAEDPEAPIVGIDKQIDACLHPERIIEARFLKDVNALREVFTLVKV 506
Query: 508 PKLKKSTRRFLREK------------------------PSGSDEPNGDGSVSDAQAVNSM 543
P KK T+R+ R+ P+ P G S S Q
Sbjct: 507 PVDKKKTKRYWRDAVDREAEGSSKKPPSVDPTKLVFDFPTSDSIPGGAPSTSAQQQSGEG 566
Query: 544 ESKPVVTVDKIGDLTPIQDF 563
+ +IG ++P++DF
Sbjct: 567 GRAEMFPQVQIGMVSPVRDF 586
>gi|74191169|dbj|BAE39415.1| unnamed protein product [Mus musculus]
Length = 732
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 168/734 (22%), Positives = 326/734 (44%), Gaps = 79/734 (10%)
Query: 4 TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
+ A++L +DV +M + P E K+ + +Q+++ E+ ++L+GT+ T+
Sbjct: 6 NKAAVVLCVDVGVAMGNSFPGEESPIEQAKKVMTMFVQRQVFSESKDEIALVLYGTDGTD 65
Query: 57 NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDYM--------LIKK--YG 105
N L + Y+++ V + + + D L++ + + Q + D++ LI++ G
Sbjct: 66 NALAGK-DQYQNITVCRHLMLPDFDLLEDIGNKIQPSSQQADFLDALIVCMDLIQRETIG 124
Query: 106 ETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV-VRASLSGEPH 164
+ + GKKH+ + TD P +DQ+ I + G+ ++ + +GEP
Sbjct: 125 KKF-GKKHIEVFTDLSSPF-------SQDQLDVIICNLKKSGISLQFFLPFPIDKNGEPG 176
Query: 165 MRVIIEN--DNLLNIFSKKSSAKT------LFVDSTTSLRGARKTRDI-------SPVTI 209
R +++ D+L F +K + + SL G +I + +
Sbjct: 177 ERGDLDSGLDHLKPSFPQKGLTEQQKEGIRMVTRVMLSLEGEDGLDEIYSFSESLRQLCV 236
Query: 210 FR----------GDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVD 259
F+ L + + IK+ YK +EKF K S +++ +
Sbjct: 237 FKKIERRSMPWPCQLTIGPNLSIKIVAYKSIVQEKF----KKSWVVVDARTLKKEDIQKE 292
Query: 260 YEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNIL 318
Y +D V E I+GYRYG ++P S + E +K+K E K +LGF +S +
Sbjct: 293 TVYCLNDDDETEVSKEDTIQGYRYGSDIIPFSKVDEEQMKYKSEGKCFSVLGFCKSSQVH 352
Query: 319 RHYYM-KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPN 377
R ++M V A + A VA+S+L A+ E+N VAIVR + + + + VGV P
Sbjct: 353 RRFFMGHQVLKVFAAKDDEAAAVALSSLVHALDELNMVAIVRYAYDK-RSNPQVGVAFPY 411
Query: 378 VSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSG 437
+ + + + LPF ED+R++ F S K P E Q A D+L+ + L
Sbjct: 412 IKDAY---ECLVYVQLPFMEDLRQYMFSSL-KNNKKCTPTEAQLSAIDDLIDSMSLVKKN 467
Query: 438 KGEILQPEL-----TPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQ 492
+ E + +L PNP +R Y L ++ H PP+ + + +P + A+ +
Sbjct: 468 EEEDIVEDLFPTSKIPNPEFQRLYQCLLHRALHLQERLPPIQQHILNMLDPPTEMKAKCE 527
Query: 493 SAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVN-SMESKPVVTV 551
S + F + E K K + + + P ++ + + S+ S +
Sbjct: 528 SPLSKVKTLFPLTEVIKKKNQVTAQDVFQDNHEEGPAAKKYKTEKEEDHISISSLAEGNI 587
Query: 552 DKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLE---NSNEGINYPKAVELLV 608
K+G + P+++F ++ ++ + E+ ++ +E ++NE + + K+++ +
Sbjct: 588 TKVGSVNPVENFRFLVRQKIA------SFEEASLQLISHIEQFLDTNETLYFMKSMDCIK 641
Query: 609 ALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKKLSLISKSEAVDSDITDDE 668
A R+ I E ++FN LE + + + + F++ ++ ++LI+K E S IT +E
Sbjct: 642 AFREEAIQFSEEQRFNSFLEALREKVEIKQLNHFWEIVVQDGVTLITKDEGPGSSITAEE 701
Query: 669 AGSFIVKSQPKHED 682
A F+ ED
Sbjct: 702 ATKFLAHKDKAKED 715
>gi|22137748|gb|AAH29218.1| Xrcc5 protein, partial [Mus musculus]
Length = 731
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 168/734 (22%), Positives = 326/734 (44%), Gaps = 79/734 (10%)
Query: 4 TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
+ A++L +DV +M + P E K+ + +Q+++ E+ ++L+GT+ T+
Sbjct: 5 NKAAVVLCVDVGVAMGNSFPGEESPIEQAKKVMTMFVQRQVFSESKDEIALVLYGTDGTD 64
Query: 57 NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDYM--------LIKK--YG 105
N L + Y+++ V + + + D L++ + + Q + D++ LI++ G
Sbjct: 65 NALAGK-DQYQNITVCRHLMLPDFDLLEDIGNKIQPSSQQADFLDALIVCMDLIQRETIG 123
Query: 106 ETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV-VRASLSGEPH 164
+ + GKKH+ + TD P +DQ+ I + G+ ++ + +GEP
Sbjct: 124 KKF-GKKHIEVFTDLSSPF-------SQDQLDVIICNLKKSGISLQFFLPFPIDKNGEPG 175
Query: 165 MRVIIEN--DNLLNIFSKKSSAKT------LFVDSTTSLRGARKTRDI-------SPVTI 209
R +++ D+L F +K + + SL G +I + +
Sbjct: 176 ERGDLDSGLDHLKPSFPQKGLTEQQKEGIRMVTRVMLSLEGEDGLDEIYSFSESLRQLCV 235
Query: 210 FR----------GDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVD 259
F+ L + + IK+ YK +EKF K S +++ +
Sbjct: 236 FKKIERRSMPWPCQLTIGPNLSIKIVAYKSIVQEKF----KKSWVVVDARTLKKEDIQKE 291
Query: 260 YEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNIL 318
Y +D V E I+GYRYG ++P S + E +K+K E K +LGF +S +
Sbjct: 292 TVYCLNDDDETEVSKEDTIQGYRYGSDIIPFSKVDEEQMKYKSEGKCFSVLGFCKSSQVH 351
Query: 319 RHYYM-KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPN 377
R ++M V A + A VA+S+L A+ E+N VAIVR + + + + VGV P
Sbjct: 352 RRFFMGHQVLKVFAAKDDEAAAVALSSLVHALDELNMVAIVRYAYDK-RSNPQVGVAFPY 410
Query: 378 VSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSG 437
+ + + + LPF ED+R++ F S K P E Q A D+L+ + L
Sbjct: 411 IKDAY---ECLVYVQLPFMEDLRQYMFSSL-KNNKKCTPTEAQLSAIDDLIDSMSLVKKN 466
Query: 438 KGEILQPEL-----TPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQ 492
+ E + +L PNP +R Y L ++ H PP+ + + +P + A+ +
Sbjct: 467 EEEDIVEDLFPTSKIPNPEFQRLYQCLLHRALHLQERLPPIQQHILNMLDPPTEMKAKCE 526
Query: 493 SAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVN-SMESKPVVTV 551
S + F + E K K + + + P ++ + + S+ S +
Sbjct: 527 SPLSKVKTLFPLTEVIKKKNQVTAQDVFQDNHEEGPAAKKYKTEKEEDHISISSLAEGNI 586
Query: 552 DKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLE---NSNEGINYPKAVELLV 608
K+G + P+++F ++ ++ + E+ ++ +E ++NE + + K+++ +
Sbjct: 587 TKVGSVNPVENFRFLVRQKIA------SFEEASLQLISHIEQFLDTNETLYFMKSMDCIK 640
Query: 609 ALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKKLSLISKSEAVDSDITDDE 668
A R+ I E ++FN LE + + + + F++ ++ ++LI+K E S IT +E
Sbjct: 641 AFREEAIQFSEEQRFNSFLEALREKVEIKQLNHFWEIVVQDGVTLITKDEGPGSSITAEE 700
Query: 669 AGSFIVKSQPKHED 682
A F+ ED
Sbjct: 701 ATKFLAPKDKAKED 714
>gi|5733688|gb|AAD49720.1|AF166486_1 Ku autoantigen [Mus musculus]
Length = 732
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 168/734 (22%), Positives = 325/734 (44%), Gaps = 79/734 (10%)
Query: 4 TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
+ A++L +DV +M + P E K+ + +Q+++ E+ ++L+GT+ T+
Sbjct: 6 NKAAVVLCVDVGVAMGNSFPGEESPIEQAKKVMTMFVQRQVFSESKDEIALVLYGTDGTD 65
Query: 57 NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDYM--------LIKK--YG 105
N L + Y+++ V + + + D L++ + + Q + D++ LI+ G
Sbjct: 66 NALAGK-DQYQNITVCRHLMLPDFDLLEDIGNKIQPSSQQADFLDALIVCMDLIQHETIG 124
Query: 106 ETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV-VRASLSGEPH 164
+ + GKKH+ + TD P +DQ+ I + G+ ++ + +GEP
Sbjct: 125 KKF-GKKHIEVFTDLSSPF-------SQDQLDVIICNLKKSGISLQFFLPFPIDKNGEPG 176
Query: 165 MRVIIEN--DNLLNIFSKKSSAKT------LFVDSTTSLRGARKTRDI-------SPVTI 209
R +++ D+L F +K + + SL G +I + +
Sbjct: 177 ERGDLDSGLDHLKPSFPQKGLTEQQKEGIRMVTRVMLSLEGEDGLDEIYFFSESLRQLCV 236
Query: 210 FR----------GDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVD 259
F+ L + + IK+ YK +EKF K S +++ +
Sbjct: 237 FKKIERRSMPWPCQLTIGPNLSIKIVAYKSIVQEKF----KKSWVVVDARTLKKEDIQKE 292
Query: 260 YEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNIL 318
Y +D V E I+GYRYG ++P S + E +K+K E K +LGF +S +
Sbjct: 293 TVYCLNDDDETEVSKEDTIQGYRYGSDIIPFSKVDEEQMKYKSEGKCFSVLGFCKSSQVH 352
Query: 319 RHYYM-KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPN 377
R ++M V A + A VA+S+L A+ E+N VAIVR + + + + VGV P
Sbjct: 353 RRFFMGHQVLKVFAAKDDEAAAVALSSLVHALDELNMVAIVRYAYDK-RSNPQVGVAFPY 411
Query: 378 VSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSG 437
+ + + + LPF ED+R++ F S K + P E Q A D+L+ + L
Sbjct: 412 IKDTY---ECLVYVQLPFMEDLRQYMFSSL-KNNMKCTPTEAQLSAIDDLIDSMSLVKKN 467
Query: 438 KGEILQPEL-----TPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQ 492
+ E + +L PNP +R Y L ++ H PP+ + + +P + A+ +
Sbjct: 468 EEEDIVEDLFPTSKIPNPEFQRLYQCLLHRALHLQERLPPIQQHILNMLDPPTEMKAKCE 527
Query: 493 SAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVN-SMESKPVVTV 551
S + F + E K K + + P ++ + + S+ S +
Sbjct: 528 SPLSKVKTLFPLTEVIKKKNQVTAQDVFQDHHEEGPAAKKYKTEKEEDHISISSLAEGNI 587
Query: 552 DKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLE---NSNEGINYPKAVELLV 608
K+G + P+++F ++ ++ + E+ ++ +E ++NE + + K+++ +
Sbjct: 588 TKVGSVNPVENFRFLVRQKIA------SFEEASLQLISHIEQFLDTNETLYFMKSMDCIK 641
Query: 609 ALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKKLSLISKSEAVDSDITDDE 668
A R+ I E ++FN LE + + + + F++ ++ ++LI+K E S IT +E
Sbjct: 642 AFREEAIQFSEEQRFNSFLEALREKVEIKQLNHFWEIVVQDGVTLITKDEGPGSSITAEE 701
Query: 669 AGSFIVKSQPKHED 682
A F+ ED
Sbjct: 702 ATKFLAPKDKAKED 715
>gi|449275319|gb|EMC84191.1| ATP-dependent DNA helicase 2 subunit 2, partial [Columba livia]
Length = 730
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 176/738 (23%), Positives = 327/738 (44%), Gaps = 97/738 (13%)
Query: 7 ALLLLLDVSPSM-------HSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENEL 59
A++L LDV +M S L +K+ ++ +Q+++ EV V+LFGT+ T N L
Sbjct: 1 AIVLCLDVGCAMSNSASGEESSLEQAKKVMTKFVQRQVFAETKDEVAVVLFGTDGTRNAL 60
Query: 60 TKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDYM--------LIKK--YGETY 108
Y+++ V + + + D L++ ++ + + G+ D++ L++K G+ Y
Sbjct: 61 ASR-DQYQNITVHRSLMLPDFDLLEDIQDVIKPGSEQADFLDAIIVCMDLLQKETIGKKY 119
Query: 109 KGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV------------VR 156
+ K+H+ L TD P+ EDQ+ I + G+ ++ +
Sbjct: 120 E-KRHIELFTDLSSPVS-------EDQLDIIIANLKKTGISLQFFLPFPVDDDDGGGDKS 171
Query: 157 ASLSGEPH-----------------------MRVIIENDNLLNIFSKKSSAKTLFVDSTT 193
AS+ + H M + E L I++ + S + L +
Sbjct: 172 ASVCSQMHRNSFPRKGLTEQQKEGIDVVRKLMHTLDEEGGLEEIYTFRESLERL----SM 227
Query: 194 SLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFAT 253
+ RK+ + L + + I++ YK EEK + D
Sbjct: 228 FKKIERKS------LPWPCQLTIGSNLSIRIVAYKSVIEEKVKKVWTVVD----AKTLRK 277
Query: 254 HEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFT 312
+++ + Y +D V + I+G+RYG +VP S + E +K+K E K +LGF+
Sbjct: 278 EDIQKETVYCLNDDDETEVQKDDTIQGFRYGSDIVPFSKEDEEQMKYKTEAKCFSVLGFS 337
Query: 313 DASNILRHYYMKDVNL-FIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVV 371
+S I R YYM + L A + A VA SAL A+ E+ VAIVR + + + + +
Sbjct: 338 RSSQIQRQYYMGNQVLKVFAAKDDENAAVAFSALVHALDELKVVAIVRYAYDR-RCNPQI 396
Query: 372 GVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKML 431
GV P + + + + LP+ ED+R + F S K P Q A D+L+ +
Sbjct: 397 GVAFPYIKDAY---ECLIYVQLPYMEDLRPYIFSSL-KNNKKCTPTVDQLSAVDSLIDSM 452
Query: 432 DL-APSGKGE----ILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPT 486
+L + GE + +P PNP +R Y L+ K+ H + PP++ L ++ E
Sbjct: 453 NLVSEDDDGETFEDLFKPSKIPNPHFQRLYQCLQHKAFHPNEPLPPIEQHLLEMLEMPHV 512
Query: 487 LLAESQSAIDAFCGQFVIKENPKLKK--STRRFLREKPSGSDEPNGDG-SVSDAQAVNSM 543
+ Q+ + F +KE K K+ + + ++ G PN + D + S+
Sbjct: 513 VKERCQAPLGKVKALFPLKEVSKKKEEKTAQDIFKDNEDG---PNPKKPKIEDEEGSFSI 569
Query: 544 ESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKA 603
+V +G + P +DF ++ +++ ++ D + + + N+I LEN Y K
Sbjct: 570 MKLAEGSVTSVGSVNPAEDFRILVRQKNT-NFKDVS-QQLINRIHQFLENKGSQY-YMKG 626
Query: 604 VELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKKLSLISKSEAVDSD 663
+ + R+ I + + FND L+ + + + F++ ++ ++SLI+K EA S
Sbjct: 627 INCIRVFREEAIKLSKVQCFNDFLQALKSKMEDKALADFWEIIIQDRISLITKDEAEGSS 686
Query: 664 ITDDEAGSFIVKSQPKHE 681
+T +EA F+ + K+E
Sbjct: 687 VTSEEAEKFLAPKEKKNE 704
>gi|160333605|ref|NP_033559.2| X-ray repair cross-complementing protein 5 [Mus musculus]
gi|166900095|sp|P27641.4|XRCC5_MOUSE RecName: Full=X-ray repair cross-complementing protein 5; AltName:
Full=ATP-dependent DNA helicase 2 subunit 2; AltName:
Full=ATP-dependent DNA helicase II 80 kDa subunit;
AltName: Full=CTC box-binding factor 85 kDa subunit;
Short=CTC85; Short=CTCBF; AltName: Full=DNA repair
protein XRCC5; AltName: Full=Ku autoantigen protein p86
homolog; AltName: Full=Ku80; AltName: Full=Nuclear
factor IV
gi|30354225|gb|AAH51660.1| Xrcc5 protein [Mus musculus]
gi|74223179|dbj|BAE40726.1| unnamed protein product [Mus musculus]
gi|148667865|gb|EDL00282.1| X-ray repair complementing defective repair in Chinese hamster
cells 5 [Mus musculus]
Length = 732
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 168/734 (22%), Positives = 326/734 (44%), Gaps = 79/734 (10%)
Query: 4 TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
+ A++L +DV +M + P E K+ + +Q+++ E+ ++L+GT+ T+
Sbjct: 6 NKAAVVLCVDVGVAMGNSFPGEESPIEQAKKVMTMFVQRQVFSESKDEIALVLYGTDGTD 65
Query: 57 NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDYM--------LIKK--YG 105
N L + Y+++ V + + + D L++ + + Q + D++ LI++ G
Sbjct: 66 NALAGK-DQYQNITVCRHLMLPDFDLLEDIGNKIQPSSQQADFLDALIVCMDLIQRETIG 124
Query: 106 ETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV-VRASLSGEPH 164
+ + GKKH+ + TD P +DQ+ I + G+ ++ + +GEP
Sbjct: 125 KKF-GKKHIEVFTDLSSPF-------SQDQLDVIICNLKKSGISLQFFLPFPIDKNGEPG 176
Query: 165 MRVIIEN--DNLLNIFSKKSSAKT------LFVDSTTSLRGARKTRDI-------SPVTI 209
R +++ D+L F +K + + SL G +I + +
Sbjct: 177 ERGDLDSGLDHLKPSFPQKGLTEQQKEGIRMVTRVMLSLEGEDGLDEIYSFSESLRQLCV 236
Query: 210 FR----------GDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVD 259
F+ L + + IK+ YK +EKF K S +++ +
Sbjct: 237 FKKIERRSMPWPCQLTIGPNLSIKIVAYKSIVQEKF----KKSWVVVDARTLKKEDIQKE 292
Query: 260 YEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNIL 318
Y +D V E I+GYRYG ++P S + E +K+K E K +LGF +S +
Sbjct: 293 TVYCLNDDDETEVSKEDTIQGYRYGSDIIPFSKVDEEQMKYKSEGKCFSVLGFCKSSQVH 352
Query: 319 RHYYM-KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPN 377
R ++M V A + A VA+S+L A+ E+N VAIVR + + + + VGV P
Sbjct: 353 RRFFMGHQVLKVFAAKDDEAAAVALSSLVHALDELNMVAIVRYAYDK-RSNPQVGVAFPY 411
Query: 378 VSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSG 437
+ + + + LPF ED+R++ F S K P E Q A D+L+ + L
Sbjct: 412 IKDAY---ECLVYVQLPFMEDLRQYMFSSL-KNNKKCTPTEAQLSAIDDLIDSMSLVKKN 467
Query: 438 KGEILQPEL-----TPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQ 492
+ E + +L PNP +R Y L ++ H PP+ + + +P + A+ +
Sbjct: 468 EEEDIVEDLFPTSKIPNPEFQRLYQCLLHRALHLQERLPPIQQHILNMLDPPTEMKAKCE 527
Query: 493 SAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVN-SMESKPVVTV 551
S + F + E K K + + + P ++ + + S+ S +
Sbjct: 528 SPLSKVKTLFPLTEVIKKKNQVTAQDVFQDNHEEGPAAKKYKTEKEEDHISISSLAEGNI 587
Query: 552 DKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLE---NSNEGINYPKAVELLV 608
K+G + P+++F ++ ++ + E+ ++ +E ++NE + + K+++ +
Sbjct: 588 TKVGSVNPVENFRFLVRQKIA------SFEEASLQLISHIEQFLDTNETLYFMKSMDCIK 641
Query: 609 ALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKKLSLISKSEAVDSDITDDE 668
A R+ I E ++FN LE + + + + F++ ++ ++LI+K E S IT +E
Sbjct: 642 AFREEAIQFSEEQRFNSFLEALREKVEIKQLNHFWEIVVQDGVTLITKDEGPGSSITAEE 701
Query: 669 AGSFIVKSQPKHED 682
A F+ ED
Sbjct: 702 ATKFLAPKDKAKED 715
>gi|74224988|dbj|BAE38207.1| unnamed protein product [Mus musculus]
Length = 732
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 168/734 (22%), Positives = 326/734 (44%), Gaps = 79/734 (10%)
Query: 4 TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
+ A++L +DV +M + P E K+ + +Q+++ E+ ++L+GT+ T+
Sbjct: 6 NKAAVVLCVDVGVAMGNSFPGEESPIEQAKKVMTMFVQRQVFSESKDEIALVLYGTDGTD 65
Query: 57 NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDYM--------LIKK--YG 105
N L + Y+++ V + + + D L++ + + Q + D++ LI++ G
Sbjct: 66 NALAGK-DQYQNITVCRHLMLPDFDLLEDIGNKIQPSSQQADFLDALIVCMDLIQRETIG 124
Query: 106 ETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV-VRASLSGEPH 164
+ + GKKH+ + TD P +DQ+ I + G+ ++ + +GEP
Sbjct: 125 KKF-GKKHIEVFTDLGSPF-------SQDQLDVIICNLKKSGISLQFFLPFPIDKNGEPG 176
Query: 165 MRVIIEN--DNLLNIFSKKSSAKT------LFVDSTTSLRGARKTRDI-------SPVTI 209
R +++ D+L F +K + + SL G +I + +
Sbjct: 177 ERGDLDSGLDHLKPSFPQKGLTEQQKEGIRMVTRVMLSLEGEDGLDEIYSFSESLRQLCV 236
Query: 210 FR----------GDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVD 259
F+ L + + IK+ YK +EKF K S +++ +
Sbjct: 237 FKKIERRSMPWPCQLTIGPNLSIKIVAYKSIVQEKF----KKSWVVVDARTLKKEDIQKE 292
Query: 260 YEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNIL 318
Y +D V E I+GYRYG ++P S + E +K+K E K +LGF +S +
Sbjct: 293 TVYCLNDDDETEVSKEDTIQGYRYGSDIIPFSKVDEEQMKYKSEGKCFSVLGFCKSSQVH 352
Query: 319 RHYYM-KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPN 377
R ++M V A + A VA+S+L A+ E+N VAIVR + + + + VGV P
Sbjct: 353 RRFFMGHQVLKVFAAKDDEAAAVALSSLVHALDELNMVAIVRYAYDK-RSNPQVGVAFPY 411
Query: 378 VSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSG 437
+ + + + LPF ED+R++ F S K P E Q A D+L+ + L
Sbjct: 412 IKDAY---ECLVYVQLPFMEDLRQYMFSSL-KNNKKCTPTEAQLSAIDDLIDSMSLVKKN 467
Query: 438 KGEILQPEL-----TPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQ 492
+ E + +L PNP +R Y L ++ H PP+ + + +P + A+ +
Sbjct: 468 EEEDIVEDLFPTSKIPNPEFQRLYQCLLHRALHLQERLPPIQQHILNMLDPPTEMKAKCE 527
Query: 493 SAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVN-SMESKPVVTV 551
S + F + E K K + + + P ++ + + S+ S +
Sbjct: 528 SPLSKVKTLFPLTEVIKKKNQVTAQDVFQDNHEEGPAAKKYKTEKEEDHISISSLAEGNI 587
Query: 552 DKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLE---NSNEGINYPKAVELLV 608
K+G + P+++F ++ ++ + E+ ++ +E ++NE + + K+++ +
Sbjct: 588 TKVGSVNPVENFRFLVRQKIA------SFEEASLQLISHIEQFLDTNETLYFMKSMDCIK 641
Query: 609 ALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKKLSLISKSEAVDSDITDDE 668
A R+ I E ++FN LE + + + + F++ ++ ++LI+K E S IT +E
Sbjct: 642 AFREEAIQFSEEQRFNSFLEALREKVEIKQLNHFWEIVVQDGVTLITKDEGPGSSITAEE 701
Query: 669 AGSFIVKSQPKHED 682
A F+ ED
Sbjct: 702 ATKFLAPKDKAKED 715
>gi|74146893|dbj|BAE41402.1| unnamed protein product [Mus musculus]
Length = 708
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 166/725 (22%), Positives = 324/725 (44%), Gaps = 79/725 (10%)
Query: 4 TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
+ A++L +DV +M + P E K+ + +Q+++ E+ ++L+GT+ T+
Sbjct: 6 NKAAVVLCVDVGVAMGNSFPGEESPIEQAKKVMTMFVQRQVFSESKDEIALVLYGTDGTD 65
Query: 57 NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDYM--------LIKK--YG 105
N L + Y+++ V + + + D L++ + + Q + D++ LI++ G
Sbjct: 66 NALAGK-DQYQNITVCRHLMLPDFDLLEDIGNKIQPSSQQADFLDALIVCMDLIQRETIG 124
Query: 106 ETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV-VRASLSGEPH 164
+ + GKKH+ + TD P +DQ+ I + G+ ++ + +GEP
Sbjct: 125 KKF-GKKHIEVFTDLSSPF-------SQDQLDVIICNLKKSGISLQFFLPFPIDKNGEPG 176
Query: 165 MRVIIEN--DNLLNIFSKKSSAKT------LFVDSTTSLRGARKTRDI-------SPVTI 209
R +++ D+L F +K + + SL G +I + +
Sbjct: 177 ERGDLDSGLDHLKPSFPQKGLTEQQKEGIRMVTRVMLSLEGEDGLDEIYSFSESLRQLCV 236
Query: 210 FR----------GDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVD 259
F+ L + + IK+ YK +EKF K S +++ +
Sbjct: 237 FKKIERRSMPWPCQLTIGPNLSIKIVAYKSIVQEKF----KKSWVVVDARTLKKEDIQKE 292
Query: 260 YEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNIL 318
Y +D V E I+GYRYG ++P S + E +K+K E K +LGF +S +
Sbjct: 293 TVYCLNDDDETEVSKEDTIQGYRYGSDIIPFSKVDEEQMKYKSEGKCFSVLGFCKSSQVH 352
Query: 319 RHYYM-KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPN 377
R ++M V A + A VA+S+L A+ E+N VAIVR + + + + VGV P
Sbjct: 353 RRFFMGHQVLKVFAAKDDEAAAVALSSLVHALDELNMVAIVRYAYDK-RSNPQVGVAFPY 411
Query: 378 VSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSG 437
+ + + + LPF ED+R++ F S K P E Q A D+L+ + L
Sbjct: 412 IKDAY---ECLVYVQLPFMEDLRQYMFSSL-KNNKKCTPTEAQLSAIDDLIDSMSLVKKN 467
Query: 438 KGEILQPEL-----TPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQ 492
+ E + +L PNP +R Y L ++ H PP+ + + +P + A+ +
Sbjct: 468 EEEDIVEDLFPTSKIPNPEFQRLYQCLLHRALHLQERLPPIQQHILNMLDPPTEMKAKCE 527
Query: 493 SAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVN-SMESKPVVTV 551
S + F + E K K + + + P ++ + + S+ S +
Sbjct: 528 SPLSKVKTLFPLTEVIKKKNQVTAQDVFQDNHEEGPAAKKYKTEKEEDHISISSLAEGNI 587
Query: 552 DKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLE---NSNEGINYPKAVELLV 608
K+G + P+++F ++ ++ + E+ ++ +E ++NE + + K+++ +
Sbjct: 588 TKVGSVNPVENFRFLVRQKIA------SFEEASLQLISHIEQFLDTNETLYFMKSMDCIK 641
Query: 609 ALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKKLSLISKSEAVDSDITDDE 668
A R+ I E ++FN LE + + + + F++ ++ ++LI+K E S IT +E
Sbjct: 642 AFREEAIQFSEEQRFNSFLEALREKVEIKQLNHFWEIVVQDGVTLITKDEGPGSSITAEE 701
Query: 669 AGSFI 673
A F+
Sbjct: 702 ATKFL 706
>gi|291392199|ref|XP_002712509.1| PREDICTED: ATP-dependent DNA helicase II [Oryctolagus cuniculus]
Length = 733
Score = 152 bits (383), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 171/746 (22%), Positives = 323/746 (43%), Gaps = 95/746 (12%)
Query: 1 MAR--TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFG 51
MAR + A++L +DV +M + P E K+ + +Q+++ E+ ++LFG
Sbjct: 1 MARFWNKAAVVLCMDVGFAMGNSFPGEESPFEQAKKVMTMFVQRQVFAESKDEIALVLFG 60
Query: 52 TEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDYM--------LIK 102
T++T+N L + Y+++ V + + + D L++ + Q G+ D++ +I+
Sbjct: 61 TDDTKNALA-DGDQYQNITVHRHLMLPDFDLLEDIDSKIQLGSQQADFLDALIVCMDVIQ 119
Query: 103 K--YGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMK--------- 151
+ G+ ++ K+H+ + TD P +DQ+ I + G+ ++
Sbjct: 120 RETVGKRFE-KRHIEVFTDLSSPFS-------KDQLDIIIHNLKKSGISLQFFLPFPIGK 171
Query: 152 ----------NIVVRASLSGEP----------------HMRVIIEN-DNLLNIFSKKSSA 184
N+ + S P M V +E D L I+S S
Sbjct: 172 EDGTGDRGDGNLPLYHHGSSFPPKGITEQQKEGIQMVKMMMVSLEGEDGLDEIYSFSESL 231
Query: 185 KTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDK 244
+ L V R + L + + IK+ YK +EK D
Sbjct: 232 RQLCVFKKIEKRSMP----------WPCQLTIGSNLSIKIVAYKSIVQEKVKKTWTVVD- 280
Query: 245 APSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE- 303
+++ + Y +D VP E ++G+RYG +VP S + E +K+K E
Sbjct: 281 ---ARTLKKEDIQKETVYCLNDDDETEVPKEDTLQGFRYGSDIVPFSKVDEEQMKYKSEG 337
Query: 304 KSVKLLGFTDASNILRHYYMK-DVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVW 362
K +LGF +S + R ++M V A + A VA+S+L A+ E++ VAIVR +
Sbjct: 338 KCFSVLGFCRSSQVQRKFFMGYQVLKVFAAKDDEAAAVALSSLVHALDELDMVAIVRYAY 397
Query: 363 RQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQE 422
+ + + VGV P + + + + LPF ED+R++ F S K + P E Q
Sbjct: 398 DR-RSNPQVGVAFPYIKDAY---ECLVYVQLPFMEDLRQYMFSSL-KNNKKFTPTEAQLN 452
Query: 423 AADNLVKMLDLAPSGKGE-----ILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSL 477
A D L+ + L + E + Q PNP +R + L ++ H PP+ +
Sbjct: 453 AVDALIDSMSLVKKDEEEGTVEDLFQTTKIPNPEFQRLFQCLLHRALHPQEPLPPIQQHI 512
Query: 478 KKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDA 537
+ +P + A+SQ+ + F + E K K K + + P ++
Sbjct: 513 LNMLDPPAEVTAKSQTPLSKIKSLFPLTEAIKRKDQVTAQDIFKDNHEEGPIAKKCKTEE 572
Query: 538 QAVN-SMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNE 596
+ + S+ S V +G + P ++F ++ +++ ++A + N I L ++NE
Sbjct: 573 EEAHFSVSSLAEGRVTSVGSVNPAENFRVIVRQKNAS--FEEASHQLINHIEQFL-DTNE 629
Query: 597 GINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKKLSLISK 656
+ K+++ + A R+ I E + FN L+ + + + + F++ ++ ++LISK
Sbjct: 630 TPYFMKSIDCIKAFREEAIEFSEEQHFNSFLKGLREKVEIKQLNHFWEIVVQDGITLISK 689
Query: 657 SEAVDSDITDDEAGSFIVKSQPKHED 682
EA S +T +EA F+ + +ED
Sbjct: 690 DEASGSSVTAEEAKQFLAPKEKPNED 715
>gi|149015962|gb|EDL75243.1| X-ray repair complementing defective repair in Chinese hamster
cells 5, isoform CRA_a [Rattus norvegicus]
Length = 732
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 175/756 (23%), Positives = 326/756 (43%), Gaps = 123/756 (16%)
Query: 4 TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
+ A++L +DV +M + P E K+ + +Q+++ E+ ++L+GTE T+
Sbjct: 6 NKAAVVLCMDVGVAMGNSFPGEESPLEQAKKVMTMFVQRQVFSESKDEIALVLYGTESTD 65
Query: 57 NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDYM--------LIKK--YG 105
N L + Y+++ V + + + D L++ + + Q + D++ LI++ G
Sbjct: 66 NALAGK-DQYQNITVHRHLMLPDFDLLEDIGNKIQPSSQQADFLDALIVCMDLIQRETIG 124
Query: 106 ETYKGKKHLCLITD------------ALCPLKDPDV----------------GTKEDQVS 137
+ + GKKH+ + TD +C LK + G ED S
Sbjct: 125 KKF-GKKHIEVFTDLSSPFSQDQLDIIICNLKKSSISLQFFLPFPIDKNGEPGETEDHDS 183
Query: 138 TIARQMVAF---GLRMK-----NIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFV 189
+ +F GL + ++V R LS E D L I+S S + L +
Sbjct: 184 SFDHCAPSFPQKGLTEQQKEGIHMVTRVMLSLEG-------KDGLDEIYSFSESLQQLCI 236
Query: 190 DSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTD 249
R + L + + I++ YK +EKF K S
Sbjct: 237 FKKIERRSLP----------WPCQLTIGPNLSIRIVAYKSIVQEKF----KKSWVVVDAR 282
Query: 250 KFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKL 308
+++ + Y +D V E I+G+RYG ++P S + E +K+K E K +
Sbjct: 283 TLKKEDIQKETVYCLNDDDETEVSKEDTIQGFRYGSDIIPFSKVDEEQMKYKSEGKCFSV 342
Query: 309 LGFTDASNILRHYYM-KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQ 367
LGF +S + R ++M V A + A VA+S+L A+ E+N VAIVR + + +
Sbjct: 343 LGFCKSSQVHRRFFMGHQVLKVFAAKDDEAAAVALSSLVHALDELNMVAIVRYAYDK-RA 401
Query: 368 SVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNL 427
+ VGV P + + + + LPF ED+R++ F S K P E Q A D+L
Sbjct: 402 NPQVGVAFPFIKDAY---ECLVYVQLPFMEDLRQYMFSSL-KNNKKCTPTEAQLSAIDDL 457
Query: 428 VKMLDLAPSGKGEILQPEL-----TPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITE 482
+ + L + E + +L PNP +R Y L ++ H PP+ + + +
Sbjct: 458 IDSMSLVKKNEEEDIIEDLFPTSKIPNPEFQRLYQCLLHRALHLQERLPPIQQHILNMLD 517
Query: 483 PDPTLLAESQSAI----------------DAFCGQFVIKENPKLKKSTRRFLREKPSGSD 526
P + A+ + + D Q V ++N + + +++ EK G
Sbjct: 518 PPTEMKAKCEIPLSKVKTLFPLTEVVKKKDQVTAQDVFQDNIEEGPAAKKYKTEKEEGH- 576
Query: 527 EPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNK 586
S+ S V K+G + P+++F ++ R+ + + +++ M +
Sbjct: 577 --------------ISISSLAEGNVTKVGSVNPVENFRVLV-RQKIASFEEASLQLMSH- 620
Query: 587 IFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFL 646
I L ++NE + + K+++ + ALR+ I E ++FN LE + + + + F++ +
Sbjct: 621 IEQFL-DTNETLYFMKSMDCIKALREEAIQFSEEQRFNSFLEGLREKVEIKQLNHFWEIV 679
Query: 647 MSKKLSLISKSEAVDSDITDDEAGSFIVKSQPKHED 682
+ ++LI+K E+ S +T +EA F+ ED
Sbjct: 680 VQDGITLITKDESPGSSVTAEEATKFLTPKDKAKED 715
>gi|26349273|dbj|BAC38276.1| unnamed protein product [Mus musculus]
Length = 708
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 166/725 (22%), Positives = 323/725 (44%), Gaps = 79/725 (10%)
Query: 4 TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
+ A++L +DV +M + P E K+ + +Q+++ E+ ++L+GT+ T+
Sbjct: 6 NKAAVVLCVDVGVAMGNSFPGEESPIEQAKKVMTMFVQRQVFSESKDEIALVLYGTDGTD 65
Query: 57 NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDYM--------LIKK--YG 105
N L + Y+++ V + + + D L++ + + Q + D++ LI++ G
Sbjct: 66 NALAGK-DQYQNITVCRHLMLPDFDLLEDIGNKIQPSSQQADFLDALIVCMDLIQRETIG 124
Query: 106 ETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV-VRASLSGEPH 164
+ + GKKH+ + TD P +DQ+ I + G+ ++ + +GEP
Sbjct: 125 KKF-GKKHIEVFTDLSSPF-------SQDQLDVIICNLKKSGISLQFFLPFPIDKNGEPG 176
Query: 165 MRVIIEN--DNLLNIFSKKSSAKT------LFVDSTTSLRGARKTRDI-------SPVTI 209
R +++ D+L F +K + + SL G +I + +
Sbjct: 177 ERGDLDSGLDHLKPSFPQKGLTEQQKEGIRMVTRVMLSLEGEDGLDEIYSFSESLRQLCV 236
Query: 210 FR----------GDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVD 259
F+ L + + IK+ YK +EKF K S +++ +
Sbjct: 237 FKKIERRSMPWPCQLTIGPNLSIKIVAYKSIVQEKF----KKSWVVVDARTLKKEDIQKE 292
Query: 260 YEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNIL 318
Y +D V E I+GYRYG ++P S + E +K+K E K +LGF +S +
Sbjct: 293 TVYCLNDDDETEVSKEDTIQGYRYGSDIIPFSKVDEEQMKYKSEGKCFSVLGFCKSSQVH 352
Query: 319 RHYYM-KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPN 377
R ++M V A + A VA+S+L A+ E+N VAIVR + + + + VGV P
Sbjct: 353 RRFFMGHQVLKVFAAKDDEAAAVALSSLVHALDELNMVAIVRYAYDK-RSNPQVGVAFPY 411
Query: 378 VSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSG 437
+ + + LPF ED+R++ F S K P E Q A D+L+ + L
Sbjct: 412 IK---GAYECLVYVQLPFMEDLRQYMFSSL-KNNKKCTPTEAQLSAIDDLIDSMSLVKKN 467
Query: 438 KGEILQPEL-----TPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQ 492
+ E + +L PNP +R Y L ++ H PP+ + + +P + A+ +
Sbjct: 468 EEEDIVEDLFPTSKIPNPEFQRLYQCLLHRALHLQERLPPIQQHILNMLDPPTEMKAKCE 527
Query: 493 SAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVN-SMESKPVVTV 551
S + F + E K K + + + P ++ + + S+ S +
Sbjct: 528 SPLSKVKTLFPLTEVIKKKNQVTAQDVFQDNHEEGPAAKKYKTEKEEDHISISSLAEGNI 587
Query: 552 DKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLE---NSNEGINYPKAVELLV 608
K+G + P+++F ++ ++ + E+ ++ +E ++NE + + K+++ +
Sbjct: 588 TKVGSVNPVENFRFLVRQKIA------SFEEASLQLISHIEQFLDTNETLYFMKSMDCIK 641
Query: 609 ALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKKLSLISKSEAVDSDITDDE 668
A R+ I E ++FN LE + + + + F++ ++ ++LI+K E S IT +E
Sbjct: 642 AFREEAIQFSEEQRFNSFLEALREKVEIKQLNHFWEIVVQDGVTLITKDEGPGSSITAEE 701
Query: 669 AGSFI 673
A F+
Sbjct: 702 ATKFL 706
>gi|41056215|ref|NP_803154.1| X-ray repair cross-complementing protein 5 [Rattus norvegicus]
gi|38181957|gb|AAH61576.1| X-ray repair complementing defective repair in Chinese hamster
cells 5 [Rattus norvegicus]
Length = 732
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 175/756 (23%), Positives = 326/756 (43%), Gaps = 123/756 (16%)
Query: 4 TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
+ A++L +DV +M + P E K+ + +Q+++ E+ ++L+GTE T+
Sbjct: 6 NKAAVVLCMDVGVAMGNSFPGEESPLEQAKKVMTMFVQRQVFSESKDEIALVLYGTESTD 65
Query: 57 NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDYM--------LIKK--YG 105
N L + Y+++ V + + + D L++ + + Q + D++ LI++ G
Sbjct: 66 NALAGK-DQYQNITVHRHLMLPDFDLLEDIGNKIQPSSQQADFLDALIVCMDLIQRETIG 124
Query: 106 ETYKGKKHLCLITD------------ALCPLKDPDV----------------GTKEDQVS 137
+ + GKKH+ + TD +C LK + G ED S
Sbjct: 125 KKF-GKKHIEVFTDLSSPFSQDQLDIIICNLKKSGISLQFFLPFPIDKNGEPGETEDHDS 183
Query: 138 TIARQMVAF---GLRMK-----NIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFV 189
+ +F GL + ++V R LS E D L I+S S + L +
Sbjct: 184 SFDHCAPSFPQKGLTEQQKEGIHMVTRVMLSLEG-------KDGLDEIYSFSESLQQLCI 236
Query: 190 DSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTD 249
R + L + + I++ YK +EKF K S
Sbjct: 237 FKKIERRSLP----------WPCQLTIGPNLSIRIVAYKSIVQEKF----KKSWVVVDAR 282
Query: 250 KFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKL 308
+++ + Y +D V E I+G+RYG ++P S + E +K+K E K +
Sbjct: 283 TLKKEDIQKETVYCLNDDDETEVSKEDTIQGFRYGSDIIPFSKVDEEQMKYKSEGKCFSV 342
Query: 309 LGFTDASNILRHYYM-KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQ 367
LGF +S + R ++M V A + A VA+S+L A+ E+N VAIVR + + +
Sbjct: 343 LGFCKSSQVHRRFFMGHQVLKVFAAKDDEAAAVALSSLVHALDELNMVAIVRYAYDK-RA 401
Query: 368 SVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNL 427
+ VGV P + + + + LPF ED+R++ F S K P E Q A D+L
Sbjct: 402 NPQVGVAFPFIKDAY---ECLVYVQLPFMEDLRQYMFSSL-KNNKKCTPTEAQLSAIDDL 457
Query: 428 VKMLDLAPSGKGEILQPEL-----TPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITE 482
+ + L + E + +L PNP +R Y L ++ H PP+ + + +
Sbjct: 458 IDSMSLVKKNEEEDIIEDLFPTSKIPNPEFQRLYQCLLHRALHLQERLPPIQQHILNMLD 517
Query: 483 PDPTLLAESQSAI----------------DAFCGQFVIKENPKLKKSTRRFLREKPSGSD 526
P + A+ + + D Q V ++N + + +++ EK G
Sbjct: 518 PPTEMKAKCEIPLSKVKTLFPLTEVVKKKDQVTAQDVFQDNIEEGPAAKKYKTEKEEGH- 576
Query: 527 EPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNK 586
S+ S V K+G + P+++F ++ R+ + + +++ M +
Sbjct: 577 --------------ISISSLAEGNVTKVGSVNPVENFRVLV-RQKIASFEEASLQLMSH- 620
Query: 587 IFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFL 646
I L ++NE + + K+++ + ALR+ I E ++FN LE + + + + F++ +
Sbjct: 621 IEQFL-DTNETLYFMKSMDRIKALREEAIQFSEEQRFNSFLEGLREKVEIKQLNHFWEIV 679
Query: 647 MSKKLSLISKSEAVDSDITDDEAGSFIVKSQPKHED 682
+ ++LI+K E+ S +T +EA F+ ED
Sbjct: 680 VQDGITLITKDESPGSSVTAEEATKFLTPKDKAKED 715
>gi|241263209|ref|XP_002405506.1| ku P80 DNA helicase, putative [Ixodes scapularis]
gi|215496806|gb|EEC06446.1| ku P80 DNA helicase, putative [Ixodes scapularis]
Length = 687
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 163/702 (23%), Positives = 306/702 (43%), Gaps = 107/702 (15%)
Query: 27 KLCSRL-IQKKLIYGKNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQS 85
K C+ L IQ+++ E+ +++ G+++T N L+ + Y H+ V+ +++ V L++
Sbjct: 16 KTCAELMIQRRIFSESKDEIALVVCGSQKTNNSLSSD-NEYTHIDVVANLQPVSFGLLEK 74
Query: 86 LKHLPQGTCAGDY-------------------------MLIKKYGETY---------KGK 111
L + D+ +L+ G + G
Sbjct: 75 LGSVKSTQHMCDFVDAVVVALDVLMDQTKNQKFAGRKVVLLSNLGGAFDDSQQNVIANGM 134
Query: 112 KHLCLITDALCPLKDPDVGTKEDQVSTIA-RQMVAFGLRMKNIVVRASLSGEPHMRVIIE 170
K+ L +CP D+ ED + ++ Q A G K + ++ G+ +
Sbjct: 135 KNSSLSLTVVCPF---DIENGEDDTAKLSPSQRKAVGYVSK---ILKTVEGDAY------ 182
Query: 171 NDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKT 230
FS+ A T + + + + P T + +LE+ + I + Y K
Sbjct: 183 ------TFSQAVPALTTY-----------EKKRVRP-TPWNANLEIGPDLSIPISSYIKI 224
Query: 231 GEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPI 290
E K T K+ + P V+ D ++ V + + GYRYG +VP
Sbjct: 225 SEAKPKTWKQCVAQRPDV------PVRCDATLYRNDEKETEVEKAETVAGYRYGTTLVPF 278
Query: 291 SSAEWEAVKF-KPEKSVKLLGFTDASNILRHYYMKDVNLFI-AEPGNSRATVAVSALARA 348
S + ++++ + + +++LGFTDA+NI RHYYM D ++ A G+ A A+SAL +A
Sbjct: 279 SDEDRDSLECTRGGRGLQVLGFTDAANIKRHYYMGDKTSYVLARKGDESAEAAMSALIQA 338
Query: 349 MKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFS 408
+++ VAIVR + + + S +G L+P + ++ + F LP+ ED+R F F
Sbjct: 339 LEKSKMVAIVRYAFSE-RSSPRMGFLSPRIKDEY---ECLVFVQLPYMEDLRRFTFAPLD 394
Query: 409 KFPVSWQPNEQQQEAADNLVKMLDLAP---SGK-GEILQPELTPNPALERFYHHLELKSE 464
+ P E+Q D+L+ +DL+ +G+ E+ + T NP L+RFY ++ ++
Sbjct: 395 ANKDNI-PTEEQLSVFDDLIAAMDLSEVEVNGEPQELFKSSQTCNPYLQRFYQCVQHRAL 453
Query: 465 H-QDAAP---PPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLRE 520
H +D P P + D+LK P + ++ ++ F + E K+ + +
Sbjct: 454 HPKDPLPEVAPHVADALK----PPKAITELARPVLEKMASLFPLHEVVPEKRKQDNTVTK 509
Query: 521 KPSG--------SDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDC 572
G SDEP S +D SM K+ + P++DF+ +++ +D
Sbjct: 510 NGGGTVTNASVSSDEPAAKKSRADF----SMADLVATATTKVDVVNPVEDFKKLLADKD- 564
Query: 573 PDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCK 632
D ++ I L +++ Y KAV L A R+ + + +P +FND + K+
Sbjct: 565 -HRFDDVCSQLEGVILKLFDDTLGRAVYAKAVRCLRAYREASLEKSDPGKFNDFMNKLKS 623
Query: 633 ICRKRNFSTFFDFLMSKKLSLISKSEAVDSDITDDEAGSFIV 674
+ + ++ L+ + + + K+E S + DDE F V
Sbjct: 624 LYSIKR-EELWELLIKEAVQPVGKAECSKSALEDDEVERFYV 664
>gi|344268219|ref|XP_003405959.1| PREDICTED: X-ray repair cross-complementing protein 5 [Loxodonta
africana]
Length = 720
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 174/745 (23%), Positives = 331/745 (44%), Gaps = 119/745 (15%)
Query: 1 MAR--TREALLLLLDVSPSM-------HSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFG 51
MAR + A++L DV +M S L +K+ + +Q+++ EV ++LFG
Sbjct: 1 MARPGNKAAVVLCADVGFAMSNSFLDEESSLEQAKKVMTMFVQRQVFAESKDEVALVLFG 60
Query: 52 TEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDYM--------LIK 102
T+ T+N L +E Y+++ V + + + D L++ ++ Q G+ D + LI+
Sbjct: 61 TDGTDNALAQE-NQYQNITVHRHLMLPDFDLLEDIESKIQPGSKHADILDALVVCMDLIQ 119
Query: 103 K--YGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLS 160
+ G+ ++ K+H+ + TD P +DQ+ I + G+ ++ + S+
Sbjct: 120 QETVGKKFE-KRHIEVFTDLSSPFS-------KDQLDVIIHNLKQSGISLQ-FFLPFSVG 170
Query: 161 GE------------------------------------PHMRVIIENDNLLN-IFSKKSS 183
GE M + +E D+ L+ I+S S
Sbjct: 171 GEDGTGDRGDGSLRLGHHGPSFPQKGITEQQKEGIQVVKRMMMSLEGDSGLDEIYSFSES 230
Query: 184 AKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSD 243
+ L V R + L + + IK+ YK +E T+KK +
Sbjct: 231 LRQLCVFKKIERRSMP----------WHCQLTVGSNLAIKIVAYKSIQQE---TIKK-TW 276
Query: 244 KAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE 303
+++ + Y +D VP E I+G+RYG +VP S + E +K++ E
Sbjct: 277 AVVDARTLKKEDIQKETVYCLNDDDETEVPKEDTIQGFRYGSDIVPFSKVDEEQMKYRSE 336
Query: 304 -KSVKLLGFTDASNILRHYYMKDVNL-FIAEPGNSRATVAVSALARAMKEMNKVAIVRCV 361
K +LGF + + R ++M + L AE + A VA+S+L A+ E++ VA+VR
Sbjct: 337 GKCFSVLGFCRSPQVQRRFFMGNQVLKVFAEKDDEAAAVALSSLIHALDELDMVAVVRYA 396
Query: 362 WRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQ 421
+ + + + VGV P++ + + + LPF ED+R++ F S K + P E Q
Sbjct: 397 YDK-KANPQVGVAFPHIKDAY---ECLVYVQLPFMEDLRQYMFSSL-KNNKKYTPTEAQL 451
Query: 422 EAADNLVKMLDLAPSGKGEILQPEL-----TPNPALERFYHHLELKSEHQDAAPPPLDDS 476
A D L+ + L + E +L PNP +RF+ L ++ H PP+
Sbjct: 452 NAVDALIDSMSLVKKDEEEDTIEDLFPTTKIPNPQFQRFFQCLLHRALHPQEPLPPIQQH 511
Query: 477 LKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSD---EPNGDGS 533
+ + +P + A+SQ + F + E +KK R++ + D + +GS
Sbjct: 512 ILNMLDPPTEVTAKSQIPLSEIKTLFPLTE--AIKK------RDQITAQDIFQDNQEEGS 563
Query: 534 VS------DAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKI 587
VS +A S+ S V +G + P ++F ++ +++ + ++ +++
Sbjct: 564 VSKKCKTEEADIPFSITSMAEGRVTSVGSVNPAENFRVLVRQKNA------SFGEVSHQL 617
Query: 588 FGLLE---NSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFD 644
+E +SNE + K+++ + A R+ I E ++FN L+ + + + + F++
Sbjct: 618 ISHIEQFLDSNETPYFMKSMDCIKAFREEAIQFSEEQRFNSFLKALQEKVKMKRLHHFWE 677
Query: 645 FLMSKKLSLISKSEAVDSDITDDEA 669
++ ++LISK EA S +T +EA
Sbjct: 678 IVVQDGITLISKDEASGSSVTAEEA 702
>gi|335303363|ref|XP_003133697.2| PREDICTED: X-ray repair cross-complementing protein 5 [Sus scrofa]
Length = 733
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 168/739 (22%), Positives = 330/739 (44%), Gaps = 81/739 (10%)
Query: 1 MAR--TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFG 51
MAR + A++L +DV +M + P E K+ + +Q+++ E+ ++LFG
Sbjct: 1 MARWGNKAAVVLCVDVGFAMSNSFPGEESPFELAKKVITMFVQRQVFAESKDEIALVLFG 60
Query: 52 TEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDYM--------LIK 102
T+ TEN L + Y+++ V + +K+ D L++ ++ Q G+ D++ LI+
Sbjct: 61 TDGTENALAGK-DQYQNITVHRHLKLPDFDLLEDIESKIQPGSQQADFLDALIVCMDLIQ 119
Query: 103 K--YGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNI----VVR 156
+ G+ ++ K+H+ + TD P +DQ+ I + G+ ++ V +
Sbjct: 120 QETIGKKFE-KRHIEVFTDLSSPFS-------KDQLDIIIHNLKKSGISLQFFLPFPVGK 171
Query: 157 ASLSGEPHMRVIIENDN-----LLNIFSKKSSAKTLFVDSTTSLRGARKTRDI------- 204
+G+ + + + L I ++ + SL G +I
Sbjct: 172 EDGTGDRGDSSLRPDHHGPSFPLKGITEQQKEGIQMVKKVMMSLEGEDGLDEIYSFSESL 231
Query: 205 SPVTIFRG----------DLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATH 254
+ IF+ L + + I++ YK +EK K S A
Sbjct: 232 RQLCIFKKIEKHSMPWPCQLTIGSNLSIRIVAYKSILQEKV----KQSWTAVDARTLKKE 287
Query: 255 EVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTD 313
+++ + Y +D VP E I+G+RYG ++P S + E +K+K E K +LGF
Sbjct: 288 DIRKETVYCLNDDDETEVPKEDTIQGFRYGSDIIPFSKVDEEQMKYKSEGKCFSVLGFCR 347
Query: 314 ASNILRHYYMKDVNL-FIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVG 372
+S + R Y+M + L A + A VA+S+L A+ E++ VA+VR + + + + VG
Sbjct: 348 SSQVHRKYFMGNQVLKVFAAKDDEAAAVALSSLIHALDELDMVAVVRYAYDK-KANPQVG 406
Query: 373 VLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD 432
V P + + + + LPF ED+R++ F S K P E Q A D+L+ +
Sbjct: 407 VAFPYIKDAY---ECLVYIQLPFMEDLRQYMFSSL-KNNKKCTPTEAQLSAVDSLIDSMC 462
Query: 433 LA----PSGKGEILQPEL-TPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTL 487
L G E L P + PNP +R + L ++ H PP+ + + +P +
Sbjct: 463 LVKKDEEEGTVEDLFPTVKIPNPQFQRLFQCLLHRALHPQEPLPPIQQHILNMLDPPTEV 522
Query: 488 LAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDG-SVSDAQAVNSMESK 546
A+ Q + F + E K K + + + P+ + +A + S
Sbjct: 523 TAKCQIPLSKIKTLFPLTEVIKKKDQVTAQDIFQDNHEEAPSSKKLKTEEEEAHFRISSL 582
Query: 547 PVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLE---NSNEGINYPKA 603
+V ++G +TP ++F ++ ++ + E+ +++ +E ++NE + K+
Sbjct: 583 AEGSVTRVGSVTPAENFRVLVRQKKA------SFEEASHQLISHIEQFLDTNETPYFMKS 636
Query: 604 VELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKKLSLISKSEAVDSD 663
++ + R+ I E ++FN+ L + + + + F++ ++ ++LI+K EA S
Sbjct: 637 MDCIKVFREEAIQFSEEQRFNNFLRALREKVEMKQLNHFWEIVIQDGMTLITKDEASGSS 696
Query: 664 ITDDEAGSFIVKSQPKHED 682
+T +EA F+ + +ED
Sbjct: 697 VTVEEAQKFLEPEENPNED 715
>gi|1110531|gb|AAC52664.1| autoantigen Ku86 [Mesocricetus auratus]
Length = 732
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 174/752 (23%), Positives = 321/752 (42%), Gaps = 115/752 (15%)
Query: 4 TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
+ A++L +DV +M + P E K+ + +Q+++ E+ ++LFGT+ TE
Sbjct: 6 NKAAVVLCMDVGIAMGNSFPGEESPFEQAKKVMTMFVQRQVFSESKDEIALVLFGTDSTE 65
Query: 57 NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDYM--------LIKK--YG 105
N L E Y+++ V + + + D L++ ++ Q G+ D++ LI++ G
Sbjct: 66 NALASE-DQYQNITVRRHLMLPDFDLLEDIESKIQLGSRQADFLDALIVCMDLIQRETIG 124
Query: 106 ETYKGKKHLCLITDALCPL----------------------------KDPDVGTKEDQVS 137
+ + GKKH+ + TD P K+ + G D
Sbjct: 125 KKF-GKKHIEVFTDLSSPFSQDQLDVIICNLKKSGISLQFFLPFPISKNNETGHSGDGDL 183
Query: 138 TIARQMVAF-----------GLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKT 186
+ + +F G+RM V+ SL GE D L I+S S +
Sbjct: 184 GLDHRGPSFPQKGVTEQQKEGIRMVERVM-VSLEGE---------DGLDEIYSFSESLRQ 233
Query: 187 LFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAP 246
L V R + L + + IK+ YK +EK D
Sbjct: 234 LCVFKKIERRSMP----------WPCQLTIGPDLSIKIVAYKSIVQEKLKKTWVVVD--- 280
Query: 247 STDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KS 305
+++ + Y +D V E I+G+RYG ++P S + E +K+K E K
Sbjct: 281 -ARTLKKEDIQKETVYCLNDDDETEVSKEDTIQGFRYGSDIIPFSKVDEEQMKYKSEGKC 339
Query: 306 VKLLGFTDASNILRHYYMK-DVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQ 364
+LGF +S + R ++M V A + A VA+S+L A+ E+N VAIVR + +
Sbjct: 340 FSVLGFCRSSQVHRRFFMGYQVLKVFAAKDDEAAAVALSSLIHALDELNMVAIVRYTYDK 399
Query: 365 GQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAA 424
+ + VGV P + + + + LPF ED+R++ F S K P E Q A
Sbjct: 400 -RANPQVGVAFPYIKDSY---ECLVYVQLPFMEDLRQYMFSSL-KNNKKCTPTEAQLSAI 454
Query: 425 DNLVKMLDLAPSGKGEILQPEL-----TPNPALERFYHHLELKSEHQDAAPPPLDDSLKK 479
D+L++ + L + E +L PNP +RF+ L + H PP+ +
Sbjct: 455 DDLIESMSLVKKSEEEDTIEDLFPTSKIPNPEFQRFFQCLLHRVLHPQERLPPIQQHILN 514
Query: 480 ITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQA 539
+ +P + A+ + + F + E +KK + ++ +DE +G +
Sbjct: 515 MLDPPTEVKAKCEIPLSKVRTLFPLTE--AVKKKDQVTAQDIFQDNDE---EGPAAKKCK 569
Query: 540 VNSMESKPVVT------VDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLE- 592
+ ES ++ V K+G + P+++F ++ ++ + E+ ++ +E
Sbjct: 570 MEKEESHISISSLAEGNVTKVGSVNPVENFRVLVRQKIA------SFEEASLQLISHIEQ 623
Query: 593 --NSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKK 650
++NE + + K++E + A R+ I E ++FN LE + + + F++ ++
Sbjct: 624 FLDTNETLYFMKSMECIKAFREEAIQFSEEQRFNSFLEALREKVEINELNHFWEIVVQDG 683
Query: 651 LSLISKSEAVDSDITDDEAGSFIVKSQPKHED 682
++LI+K E S +T +EA F+ ED
Sbjct: 684 VTLITKDEGPGSSVTTEEATKFLAPKDKAKED 715
>gi|390369106|ref|XP_797768.3| PREDICTED: X-ray repair cross-complementing protein 5-like
[Strongylocentrotus purpuratus]
Length = 657
Score = 148 bits (374), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 145/539 (26%), Positives = 246/539 (45%), Gaps = 59/539 (10%)
Query: 165 MRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKV 224
M ++ E + + F + A T+F + R + P T ++ +LE+ ++KI V
Sbjct: 139 MNIVEEVNGCIYSFDEVIPAVTMF-----------EKRAVRP-TPWKVNLEIGSELKIPV 186
Query: 225 WVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYG 284
Y K E + K K +F ++ + +D V E +++GYRYG
Sbjct: 187 SGYLKVKEATAKSWKSTFQKGHR--EFTPQTIRSKHLN---DDEETEVEKEDQVEGYRYG 241
Query: 285 PQVVPISSAEWEAVKFK-PEKSVKLLGFTDASNILRHYYMKD-VNLFIAEPGNSRATVAV 342
++PIS + + + +K P K +++LGFT S I +H + + V +F A+P + A ++
Sbjct: 242 NDIIPISEEDKKNMDYKKPGKVMQVLGFTKDSKIKKHQQIGNSVYIFYAQPDDQAAAMSF 301
Query: 343 SALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREF 402
SAL A+ E N VAIVR + G + +G L P++ K N FY LPFAED+R +
Sbjct: 302 SALVNALYETNSVAIVRRAY-SGSSAPRIGFLAPHI--KANYEALFYIE-LPFAEDLRMY 357
Query: 403 QFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPS-----GKGEILQPELTPNPALERFYH 457
F S QP+E+Q A D+L+ +DL + G E L+P+ T NP +R
Sbjct: 358 TFMSLDNNK-RCQPSEEQLAAVDSLIDNMDLMTAEEDEDGDTEALKPKNTLNPYTQRLCQ 416
Query: 458 HLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRF 517
L ++ + D P ++ ++ +P C ++ P ++ + F
Sbjct: 417 CLMHRALNPDDPIPGIETAIATYLQP---------------CRAVAVQCEPDVEAMQKLF 461
Query: 518 LREKPSGSDEPNGDGSVSDAQAVNSMESKPVVTVD-------------KIGDLTPI-QDF 563
EK + GD + + ++ VD IG +T + DF
Sbjct: 462 KLEKAKAKENVTGDSIWKASDGGDGEPARKKAKVDDEVNGGDLSMAGMAIGVVTEVFGDF 521
Query: 564 EAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQF 623
+A++S++D D +A M +I L++ S Y KA++ L R+ I EP+ F
Sbjct: 522 KAIISQKD-EDRFKEAAGQMGKRILQLVKESFGSQLYGKALDCLRVYREQAIQLSEPETF 580
Query: 624 NDVLEKVCKICRKRNFSTFFDFLMSKKLSLISKSEAVDSDITDDEAGSFIVKSQPKHED 682
N L K+ ++ F+ + L+LI +EA DS ++ DEA FI + + ED
Sbjct: 581 NAYLRKLKDELKELLKVDFWQDVTKDGLTLIDVTEARDSKVSKDEADKFIQEEEVPMED 639
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 54/99 (54%), Gaps = 12/99 (12%)
Query: 2 ARTREALLLLLDVSPSMH-------SVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEE 54
++ +EA++++LDV PSM+ + L + + ++Q+K+ E+ +ILFGT
Sbjct: 3 SKEKEAIVIVLDVGPSMNQAPPGNCTTLETARDVITMILQRKVFAESKDEIALILFGTPG 62
Query: 55 TENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGT 93
+ N++ Y+++ V + ++ D L+Q ++ Q +
Sbjct: 63 SANKMD-----YDNITVERPFRLADLDLIQHIRSNIQAS 96
>gi|156051442|ref|XP_001591682.1| hypothetical protein SS1G_07128 [Sclerotinia sclerotiorum 1980]
gi|154704906|gb|EDO04645.1| hypothetical protein SS1G_07128 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 705
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 177/688 (25%), Positives = 301/688 (43%), Gaps = 96/688 (13%)
Query: 41 KNHEVGVILFGTEETENELTKEV-GGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGD 97
K VG++ F T+ET N+L + GYE++ VL+ + ++ ++ + P GT AGD
Sbjct: 49 KTDGVGIVGFRTDETNNDLQRSGEQGYENISVLKPLGQFQMTDLEEMQEVIKPNGTEAGD 108
Query: 98 YM--------LIKKYGETYKGK-----KHLCLITDALCPLKDPDVGTKEDQVSTIARQMV 144
+ +IK++ GK + + L+TD + ++ ++S ++V
Sbjct: 109 AVSAVVVAVEMIKEHTTLKSGKPGKFARKIVLVTDGKGFMHGEELDDIAKEISRNDIKLV 168
Query: 145 AFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRG-----AR 199
G+ + E V EN+ LL F++ S +F ++ +
Sbjct: 169 VIGVDFDD--AEFGFKEEDKDLVKAENEKLLRSFTE-SCLDGIFGTIAEAIEALATPVVK 225
Query: 200 KTRDISPVTIFRGDLELSEKMK-------IKVWVYKKTGEEKFPTLKKY----SDKAPST 248
TR+ + T G L L + K I V Y KT + K + + Y ++ P
Sbjct: 226 VTREYNTYT---GPLTLGDPTKYPETAVSIDVARYFKTHQAKPVSARSYVEAGDEELPDA 282
Query: 249 DKFATHEVKVDYEYKSVEDPS-----KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE 303
D + VK YK V DP+ + V + KGY YG +V IS A+ K +
Sbjct: 283 DDLTS--VKQTRTYK-VNDPTAPGGKRDVERDDLEKGYEYGSTIVHISQADEGVTKLQAI 339
Query: 304 KSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWR 363
K ++GF +N R+ M + + I + N +A +A+S+ A+ E+N A+ R V +
Sbjct: 340 KDFSIIGFV-PNNYERYLNMGESCITIPQKTNEKARMALSSFVHALNELNSCAVARIVKK 398
Query: 364 QGQQSVVVGV---LTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK-FPVSWQ---- 415
G ++V + + P++ +++P LPFAEDVR ++F K F S
Sbjct: 399 DGADPLIVILAPFIEPDLEGLVDVP-------LPFAEDVRSYRFAPLDKVFNSSGGLMEK 451
Query: 416 ----PNEQQQEAADNLVKMLDLAPSGKGEILQP------ELTPNPALERFYHHLELKSEH 465
P++ + A + V +DL+ +GK E P E T +P L R + ++
Sbjct: 452 HKNLPSKDLKAAMSSFVDSMDLSTAGKDEAGDPVEYMAIEDTYSPVLHRINQAIRRRAVK 511
Query: 466 QDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLRE--KPS 523
D PP D L K + P L+ +S S + E +KK+ + RE KP
Sbjct: 512 PDEGVPPPPDVLIKWSHPPSELVEKSSSQLTKLI------ETADVKKAKAKRNREVVKPL 565
Query: 524 GSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDM 583
S D +A+ E + +TVD I +F+ ++ D + V K +M
Sbjct: 566 ---------SGLDVEALLGREKRQKITVD-----NAIPEFKRTLASTDSTESVTKVTREM 611
Query: 584 KNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFST-- 641
+ + LL+ S + +A E L +R I EP+ +N+ +EK K + +F
Sbjct: 612 GDTVRTLLKRSTGNSTWAQAEEYLRVMRTELIDLVEPEVYNNFIEKFKKQLQNEDFDRMF 671
Query: 642 FFDFLMSKKLSLISKSEAVDSDITDDEA 669
+FD + KL LI EA +++ T+DEA
Sbjct: 672 WFDIVRKNKLGLIHTGEASNTEKTEDEA 699
>gi|426221531|ref|XP_004004963.1| PREDICTED: X-ray repair cross-complementing protein 5 [Ovis aries]
Length = 733
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 169/736 (22%), Positives = 322/736 (43%), Gaps = 75/736 (10%)
Query: 1 MART--REALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFG 51
MAR+ + A++L +DV +M + P E K+ + +Q+++ EV ++LFG
Sbjct: 1 MARSWNKAAVVLCMDVGLAMSNSFPGEESPFELAKKVITMFVQRQVFAENKDEVALVLFG 60
Query: 52 TEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDYM--------LIK 102
T+ TEN L E Y+++ V + + D L++ ++ Q G+ D++ LI+
Sbjct: 61 TDGTENALAGE-DQYQNITVHRHLMRPDFDLLEDIESKIQPGSQQADFLDALIVCMDLIQ 119
Query: 103 K--YGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNI----VVR 156
K G+ ++ KKH+ + TD P DQ+ I + G+ ++ +V+
Sbjct: 120 KETLGKKFE-KKHIEVFTDLSSPFS-------RDQLDIIIHNLKKSGISLQFFLPFPIVK 171
Query: 157 ASLSGEPHMRVIIENDNL-----LNIFSKKSSAKTLFVDSTTSLRGARKTRDI------- 204
+G+ ++ +D+ I ++ + SL G +I
Sbjct: 172 KGGTGDRGDGSLLLDDHGPSFPPKGITEQQKEGIQMVKKVMMSLEGEDGLEEIYSFSESL 231
Query: 205 SPVTIFR----------GDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATH 254
+ +F+ L + + IK+ YK +EK K S
Sbjct: 232 RQLCVFKKMERHSMPWSCQLTIGSNLSIKIVAYKSITQEKV----KKSWTVVDARTLKKE 287
Query: 255 EVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTD 313
+++ + Y +D V E I+G+RYG ++P S + E +K++ E K +LGF
Sbjct: 288 DIQKETVYCLNDDDETEVSKEDTIQGFRYGSDIIPFSKVDEEQMKYRSEGKCFSVLGFCR 347
Query: 314 ASNILRHYYMKDVNL-FIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVG 372
+S + Y+M + L A + A VA+S+L A+ E++ VA+VR + Q + + VG
Sbjct: 348 SSQVHMKYFMGNQVLKVFAAKDDEAAAVALSSLIHALDELDMVAVVRYAYDQ-RTNPQVG 406
Query: 373 VLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD 432
V P + + + + LPF ED+R++ F S K P E Q A D L+ +
Sbjct: 407 VAFPLIKDTY---ECLVYIQLPFMEDLRQYMFSSL-KNNRKCTPTEAQLSAVDALIDSMS 462
Query: 433 LAPSGKGEILQPEL-----TPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTL 487
L + E +L PNP +R + L ++ H PP+ + + +P +
Sbjct: 463 LVQKDEEEGTIEDLFPTSKIPNPQFQRLFQCLLHRALHPQEPLPPIQQHILSMLDPPTEV 522
Query: 488 LAESQSAIDAFCGQFVIKENPKLKKS-TRRFLREKPSGSDEPNGDGSVSDAQAVNSMESK 546
A+ Q + F + E K K T + L + + +A S+ S
Sbjct: 523 TAKGQVPVSKIKTLFPLTEVIKKKNQVTGQDLFQDNHEEGPTCKRLKTEEEEARFSVSSL 582
Query: 547 PVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVEL 606
TV +G + P +F ++ ++ ++A + N I L ++NE + + K+++
Sbjct: 583 AEGTVTCVGSVNPADNFRVLVRQKKAS--FEEASHQLINHIEQFL-DTNETLYFMKSMDC 639
Query: 607 LVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKKLSLISKSEAVDSDITD 666
+ A R+ I E ++FN+ L+ + + + + F++ ++ ++LI+K E S +T
Sbjct: 640 IKAFREEAIQFSEEQRFNNFLKALREKVEIKQLNHFWEIVVHDGVTLITKDEVPGSSVTT 699
Query: 667 DEAGSFIVKSQPKHED 682
+EA F+ + + D
Sbjct: 700 EEAKKFLAPKENANTD 715
>gi|53586|emb|CAA46999.1| p80 Ku autoantigen [Mus musculus]
Length = 732
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 171/751 (22%), Positives = 326/751 (43%), Gaps = 113/751 (15%)
Query: 4 TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
+ A++L +DV +M + +P E K+ + +Q+++ E+ + L+GT+ T+
Sbjct: 6 NKAAVVLCVDVGVAMGNSIPGEESPIEQAKKVMTMFVQRQVFSESKDEIALALYGTDGTD 65
Query: 57 NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDYM--------LIKK--YG 105
L+ + Y+++ V + + + D L++ + + Q + D++ LI++ G
Sbjct: 66 MPLSGK-DQYQNITVCRHLMLPDFDLLEDIGNKIQPSSQQADFLDALIVCMDLIQRETIG 124
Query: 106 ETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV-VRASLSGEPH 164
+ + GKKH+ + TD P +DQ+ I + G+ ++ + +GEP
Sbjct: 125 KKF-GKKHIEVFTDLRSPFS-------KDQLDVIICNLKKCGISLQFFLPFPIDKNGEPG 176
Query: 165 MRVIIEN--DNLLNIFSKKSSAKT------LFVDSTTSLRGARKTRDI-------SPVTI 209
R +++ D+L F +K + + SL G +I + +
Sbjct: 177 ERGDLDSGLDHLKPSFPQKGLTEQQKEGIRMVTRVMLSLEGEDGLDEIYSFSESLRQLCV 236
Query: 210 FR----------GDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVD 259
F+ L + + IK+ YK +EKF K S +++ +
Sbjct: 237 FKKIERRSMPWPCQLTIGPNLSIKIVAYKSIVQEKF----KKSWVVVDARTLKKEDIQKE 292
Query: 260 YEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNIL 318
Y +D V E I+GYRYG ++P S + E +K+K E K +LGF +S +
Sbjct: 293 TVYCLNDDDETEVSKEDTIQGYRYGSDIIPFSKVDEEQMKYKSEGKCFSVLGFCKSSQVH 352
Query: 319 RHYYM-KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVW--RQGQQSVVVGVLT 375
R ++M V A + A VA+S+L A+ E+N VAIVR + R Q V +
Sbjct: 353 RRFFMGHQVLKVFAAKDDEAAAVALSSLVHALDELNMVAIVRYAYDKRSNPQVGVASLYI 412
Query: 376 PNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAP 435
+ E++ + LPF ED+R++ F S K P E Q A D+L+ + L
Sbjct: 413 KDAYERL------VYVQLPFMEDLRQYMFSSL-KNNKKCTPTEAQLSAIDDLIDSMSLVK 465
Query: 436 SGKGEILQPEL-----TPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEP------- 483
+ E + +L PNP +R Y L ++ H PP+ + I +P
Sbjct: 466 KNEEEDIVEDLFPASKIPNPEFQRLYQCLLHRALHLQERLPPIQQHILNIWDPPTEMKQK 525
Query: 484 --DPTL-------LAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSV 534
P L L E + Q V ++N + + +++ EK
Sbjct: 526 CESPPLKVKTLFPLTEVIKKKNQVTAQDVFQDNHEEGPAAKKYKTEKEE----------- 574
Query: 535 SDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLE-- 592
D +++S+ + K+G + P+++F ++ ++ + E+ ++ +E
Sbjct: 575 -DHISISSLAEG---NITKVGSVNPVENFRFLVRQKIA------SFEEASLQLISHIEQF 624
Query: 593 -NSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKKL 651
++NE + + K+++ + A R+ I E ++FN LE + + + + F++ ++ +
Sbjct: 625 LDTNETLYFMKSMDCIKAFREEAIQFSEEQRFNSFLEALREKVEIKQLNHFWEIVVQDGV 684
Query: 652 SLISKSEAVDSDITDDEAGSFIVKSQPKHED 682
+LI+K EA S IT +EA F+ ED
Sbjct: 685 TLITKDEAPGSSITAEEAKKFLAPKDKAKED 715
>gi|442762071|gb|JAA73194.1| Putative dna-binding subunit of a dna-dependent protein kinase ku80
autoantigen, partial [Ixodes ricinus]
Length = 637
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 128/505 (25%), Positives = 236/505 (46%), Gaps = 33/505 (6%)
Query: 192 TTSLRGARKTRDISPVTI-FRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDK 250
+ SLR + I+ +I +R L + + I++ YK +EK T D
Sbjct: 134 SESLRQLCIFKKIARSSIPWRCQLTIGSNLSIEILAYKSIVQEKVKTSWTVVD----ART 189
Query: 251 FATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLL 309
+++ + Y +D VP E I+G+RYG ++P S + E +K+K E K +L
Sbjct: 190 LRKEDIQKETVYCLNDDDETEVPKEDTIQGFRYGSDIIPFSKVDQEQMKYKSEGKCFSVL 249
Query: 310 GFTDASNILRHYYMKDVNL-FIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQS 368
GF +S + R Y+M + L A G+ A VA+S+L A+ E++ VAIVR + + + +
Sbjct: 250 GFCRSSQVHRKYFMGNQVLKVFAAKGDEAAAVALSSLIHALDELDMVAIVRYAYDR-RTN 308
Query: 369 VVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV 428
VGV P++ + + + LPF ED+R++ F S + P E Q A D L+
Sbjct: 309 PQVGVAFPHIKDTY---ECLVYVQLPFMEDLRQYMFSSLKN--NKYTPTEVQLSAVDALI 363
Query: 429 KMLDLAPSGKGEILQPEL-----TPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEP 483
+ L + E +L PNP +R + L ++ H PP+ + + +P
Sbjct: 364 DSMSLMKKEEEEDTIKDLFPTTKIPNPQFQRLFQCLLHRALHPQEHLPPVQQHVLNMLDP 423
Query: 484 DPTLLAESQSAIDAFCGQFVIKENPKLKKSTRR---FLREKPSGSDEPNGDGSVSDAQAV 540
+ A+ Q + F + E K K F GS+ + + A
Sbjct: 424 STEVTAKCQIPLSEIKALFPLTEVIKRKNQLTAQDIFQDNHEEGSN--SKKFKTEEGGAH 481
Query: 541 NSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLE---NSNEG 597
S + V++ K+G ++P +DF ++ ++ + E++ ++ +E ++NE
Sbjct: 482 FSFSNLAKVSITKVGSVSPAEDFRVLVRQKSA------SFEEVSLQLINHIEQFLDTNET 535
Query: 598 INYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKKLSLISKS 657
+ K+++ + A R+ I E + FN+ L+ + + KR S F++ ++ ++LI+K
Sbjct: 536 PYFMKSMDCIRAFREEAIQFSEYQCFNNFLKALREKVEKR-LSHFWEIIIQDGITLITKD 594
Query: 658 EAVDSDITDDEAGSFIVKSQPKHED 682
EA S +T +EA F+ + ++ED
Sbjct: 595 EASGSSVTAEEAKKFLAPKENQNED 619
>gi|156120929|ref|NP_001095611.1| X-ray repair cross-complementing protein 5 [Bos taurus]
gi|154426068|gb|AAI51453.1| XRCC5 protein [Bos taurus]
Length = 733
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 172/746 (23%), Positives = 320/746 (42%), Gaps = 95/746 (12%)
Query: 1 MART--REALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFG 51
MAR+ + A++L +DV +M + P E K+ + +Q+++ EV ++LFG
Sbjct: 1 MARSWDKAAVVLCMDVGLAMSNSFPGEESPFELAKKVMTMFVQRQVFAENKDEVALVLFG 60
Query: 52 TEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDYM--------LIK 102
T+ T+N L Y+++ V + + D L++ ++ Q G+ D + LI+
Sbjct: 61 TDGTKNALAAG-DQYQNITVHRHLMRPDFDLLEDIESKIQPGSQQADLLDALIVCMDLIQ 119
Query: 103 K--YGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV------ 154
+ G+ ++ K+H+ + TD P DQ+ I + G+ ++ +
Sbjct: 120 EETLGKKFE-KRHIEVFTDLSSPFS-------RDQLDIIIHNLKKSGISLQFFLPFPIGK 171
Query: 155 -------VRASLSGEPH-----------------------MRVIIENDNLLNIFSKKSSA 184
SL + H M + D L I+S +
Sbjct: 172 QGGTGDRGDGSLLSDHHGPSFPPKGITEQQKEGIQMVKKVMMSLEGEDGLEEIYSFSEAL 231
Query: 185 KTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDK 244
+ L V T R + L + + IK+ YK +EK D
Sbjct: 232 RQLCVFKKTERRSMP----------WSCQLTIGSNLSIKIVAYKSITQEKVKKCWTVVD- 280
Query: 245 APSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE- 303
A + K A + V Y +D V E I+G+RYG ++P S + E +K+K E
Sbjct: 281 ARTLKKEAIQKETV---YCLNDDDETEVSKEDTIQGFRYGSDIIPFSKVDEEQMKYKSEG 337
Query: 304 KSVKLLGFTDASNILRHYYMKDVNL-FIAEPGNSRATVAVSALARAMKEMNKVAIVRCVW 362
K +LGF +S + Y+M + L A + A VA+S+L A+ E++ VA+VR V+
Sbjct: 338 KCFSVLGFCRSSQVHMKYFMGNQVLKVFAAKDDEAAAVALSSLIHALDELDMVAVVRYVY 397
Query: 363 RQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQE 422
+ + + VGV P + + + + LPF ED+R++ FPS K P E Q
Sbjct: 398 NE-KTNPQVGVAFPLIKDAY---ECLVYIQLPFMEDLRQYMFPSL-KNNRKCTPTEAQLS 452
Query: 423 AADNLVKMLDLAPSGKGEILQPEL-----TPNPALERFYHHLELKSEHQDAAPPPLDDSL 477
A D L+ + L + E +L PNP +R + L ++ H PP+ +
Sbjct: 453 AVDALIDSMSLVQKDEEEGTIEDLFPTSKIPNPQFQRLFQCLLHRALHPQEPLPPIQQHI 512
Query: 478 KKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDG-SVSD 536
+ +P + A+ Q + F + E K K + + + P +
Sbjct: 513 LSMLDPPTEVTAKCQVPLSKIKTLFPLTEVIKKKNQVTGQDIFQDNHEEGPTCKKLKTEE 572
Query: 537 AQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNE 596
+A S+ S +V +G + P ++F ++ ++ ++A + N I L ++NE
Sbjct: 573 EEAHFSVSSLAEGSVTCVGSVNPAENFRVLVRQKKAT--FEEASHQLINHIEQFL-DTNE 629
Query: 597 GINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKKLSLISK 656
+ + K+++ + A R+ I E ++FN+ L+ + + + + F++ ++ ++LI+K
Sbjct: 630 TLYFMKSMDCIKAFREEAIQFSEEQRFNNFLKALREKVEVKQLNHFWEIVVHDGVTLITK 689
Query: 657 SEAVDSDITDDEAGSFIVKSQPKHED 682
EA S +T +EA F+ + + D
Sbjct: 690 DEAPGSSVTTEEAKKFLAPKENANAD 715
>gi|18181884|dbj|BAB83859.1| Xrcc5 [Rattus norvegicus]
Length = 683
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 160/684 (23%), Positives = 306/684 (44%), Gaps = 66/684 (9%)
Query: 44 EVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDYM--- 99
E+ ++L+GT+ T+N L + Y+++ V + + + D L++ + + Q + D++
Sbjct: 4 EIALVLYGTDGTDNALAGK-DQYQNITVCRHLMLPDFDLLEDIGNKIQPSSQQADFLDAL 62
Query: 100 -----LIKK--YGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKN 152
LI+ G+ + GKKH+ + TD P +DQ+ I + G+ ++
Sbjct: 63 IVCMDLIQHETIGKKF-GKKHIEVFTDLSSPF-------SQDQLDVIICNLKKSGISLQF 114
Query: 153 IV-VRASLSGEPHMRVIIEN--DNLLNIFSKKSSAKT------LFVDSTTSLRGARKTRD 203
+ +GEP R +++ D+L F +K + + SL G +
Sbjct: 115 FLPFPIDKNGEPGERGDLDSGLDHLKPSFPQKGLTEQQKEGIRMVTRVMLSLEGEDGLDE 174
Query: 204 I-------SPVTIFR----------GDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAP 246
I + IF+ L + + I++ YK +EKF K S
Sbjct: 175 IYSFSESLQQLCIFKKIERRSLPWPCQLTIGPNLSIRIVAYKSIVQEKF----KKSWVVV 230
Query: 247 STDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KS 305
+++ + Y +D V E I+G+RYG ++P S + E +K+K E K
Sbjct: 231 DARTLKKEDIQKETVYCLNDDDETEVSKEDTIQGFRYGSDIIPFSKVDEEQMKYKSEGKC 290
Query: 306 VKLLGFTDASNILRHYYM-KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQ 364
+LGF +S + R ++M V A + A VA+S+L A+ E+N VAIVR + +
Sbjct: 291 FSVLGFCKSSQVHRRFFMGHQVLKVFATKDDEAAAVALSSLVHALDELNMVAIVRYAYDK 350
Query: 365 GQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAA 424
+ + VGV P + + + + LPF ED+R++ F S K P E Q A
Sbjct: 351 -RSNPQVGVAFPYIKDAY---ECLVYVQLPFMEDLRQYMFSSL-KNNKKCTPTEAQLSAI 405
Query: 425 DNLVKMLDLAPSGKGEILQPEL-----TPNPALERFYHHLELKSEHQDAAPPPLDDSLKK 479
D+L+ + L + E + +L PNP +R Y L ++ H PP+ +
Sbjct: 406 DDLIDSMSLVKKNQEEDIIEDLFPTSKIPNPEFQRLYQCLLHRALHLQERLPPIQQHILN 465
Query: 480 ITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQA 539
+ +P + A+ + + F + E K K + + + P ++ +
Sbjct: 466 MLDPPTEMKAKCEIPLSKVKTLFPLTEVIKKKNQVTAQDVFQDNNEEGPAAKKYRTEKEE 525
Query: 540 VN-SMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGI 598
+ S+ S V K+G + P+++F + R+ + + +++ M + I L ++NE +
Sbjct: 526 GHISISSLAEGNVTKVGSVNPVENFRVXV-RQKIASFEEASLQLMSH-IEQFL-DTNETL 582
Query: 599 NYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKKLSLISKSE 658
+ K+++ + ALR+ I E ++FN LE + + + + F++ ++ ++LI+K E
Sbjct: 583 YFMKSMDCIKALREEAIQFSEEQRFNSFLEGLREKVEIKQLNHFWEIVVQDGITLITKDE 642
Query: 659 AVDSDITDDEAGSFIVKSQPKHED 682
+ S +T +EA F+ ED
Sbjct: 643 SPGSSVTAEEATKFLTPKDKAKED 666
>gi|440905725|gb|ELR56072.1| X-ray repair cross-complementing protein 5, partial [Bos grunniens
mutus]
Length = 705
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 169/725 (23%), Positives = 311/725 (42%), Gaps = 93/725 (12%)
Query: 7 ALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETENEL 59
A++L +DV +M + PD E K+ + +Q+++ EV ++LFGT+ TEN L
Sbjct: 2 AVVLCMDVGLAMSNSFPDEESPFELAKKVMTMFVQRQVFAENKDEVALVLFGTDGTENAL 61
Query: 60 TKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDYM--------LIKK--YGETY 108
Y+++ V + + D L++ ++ Q G+ D + LI++ G+ +
Sbjct: 62 AAG-DQYQNITVHRHLMRPDFDLLEDIESKIQPGSQQADLLDALIVCMDLIQEETLGKKF 120
Query: 109 KGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV-------------V 155
+ K+H+ + TD P DQ+ I + G+ ++ +
Sbjct: 121 E-KRHIEVFTDLSSPFS-------RDQLDIIIHNLKKSGISLQFFLPFPIGKQGGTGDRG 172
Query: 156 RASLSGEPH-----------------------MRVIIENDNLLNIFSKKSSAKTLFVDST 192
SL + H M + D L I+S + + L V
Sbjct: 173 DGSLLSDHHGPSFPPKGITKQQKEGIQMVKKVMMSLEGEDGLEEIYSFSEALRQLCVFKK 232
Query: 193 TSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFA 252
T R + L + + IK+ YK +EK D A + K A
Sbjct: 233 TERRSMP----------WSCQLTIGSNLSIKIVAYKSITQEKVKKCWTVVD-ARTLKKEA 281
Query: 253 THEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGF 311
+ V Y +D V E I+G+RYG ++P S + E +K+K E K +LGF
Sbjct: 282 IQKETV---YCLNDDDETEVSKEDTIQGFRYGSDIIPFSKVDEEQMKYKSEGKCFSVLGF 338
Query: 312 TDASNILRHYYMKDVNL-FIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVV 370
+S + Y+M + L A + A VA+S+L A+ E++ VA+VR V+ + + +
Sbjct: 339 CRSSQVHMKYFMGNQVLKVFAAKDDEAAAVALSSLIHALDELDMVAVVRYVYNE-KTNPQ 397
Query: 371 VGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKM 430
VGV P + + + + LPF ED+R++ FPS K P E Q A D L+
Sbjct: 398 VGVAFPLIKDAY---ECLVYIQLPFMEDLRQYMFPSL-KNNRKCTPTEAQLSAVDALIDS 453
Query: 431 LDLAPSGKGEILQPEL-----TPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDP 485
+ L + E +L PNP +R + L ++ H PP+ + + +P
Sbjct: 454 MSLVQKDEEEGTIEDLFPTSKIPNPQFQRLFQCLLHRALHPQEPLPPIQQHILSMLDPPT 513
Query: 486 TLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDG-SVSDAQAVNSME 544
+ A+ Q + F + E K K + + + P + +A S+
Sbjct: 514 EVTAKCQVPLSKIKTLFPLTEVIKKKNQVTGQDIFQDNHEEGPTCKKLKTEEEEAHFSVS 573
Query: 545 SKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAV 604
S +V +G + P ++F ++ ++ ++A + N I L ++NE + + K++
Sbjct: 574 SLAEGSVTCVGSVNPAENFRVLVRQKKAT--FEEASHQLINHIEQFL-DTNETLYFMKSM 630
Query: 605 ELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKKLSLISKSEAVDSDI 664
+ + A R+ I E ++FN+ L+ + + + + F++ ++ ++LI+K EA S +
Sbjct: 631 DCIKAFREEAIQFSEEQRFNNFLKALREKVEVKQLNHFWEIVVHDGVTLITKDEAPGSSV 690
Query: 665 TDDEA 669
T +EA
Sbjct: 691 TTEEA 695
>gi|355565162|gb|EHH21651.1| hypothetical protein EGK_04770, partial [Macaca mulatta]
Length = 729
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 168/745 (22%), Positives = 327/745 (43%), Gaps = 112/745 (15%)
Query: 1 MART--REALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFG 51
M R+ + A++L +DV +M + +P VE K+ + +Q+++ E+ ++LFG
Sbjct: 1 MVRSGNKAAVVLCMDVGFTMSNSIPGVESPFEQAKKVITMFVQRQVFAENKDEIALVLFG 60
Query: 52 TEETENELTKEVGG--YEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDYM--LI----- 101
T+ T+N L+ GG Y+++ V + + + D L++ ++ Q G+ D++ LI
Sbjct: 61 TDGTDNPLS---GGDQYQNITVHRHLMLPDFDLLEDIESKIQPGSQQADFLDALIVSMDV 117
Query: 102 ---KKYGETYKGKKHLCLITD------------ALCPLKDPDV----------------G 130
+ G+ ++ K+H+ + TD + LK D+ G
Sbjct: 118 IQHETIGKKFE-KRHIEIFTDLSSRFSKSQLDIIIHSLKKCDISLQFFLPFSLGMEDGSG 176
Query: 131 TKEDQVSTIARQMVAF-----------GLRMKNIVVRASLSGEPHMRVIIENDNLLNIFS 179
+ D + +F GL + +V+ SL GE D L I+S
Sbjct: 177 DRGDGTFRLGGHGPSFPLKGITEQQKEGLEIVKMVM-ISLEGE---------DGLDEIYS 226
Query: 180 KKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLK 239
S + L V + + P L + + I++ YK +E+
Sbjct: 227 FSESLRKLCV-----FKKIERHSIHWPCR-----LTIGSNLSIRIAAYKSILQERVKKTW 276
Query: 240 KYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVK 299
D +++ + Y +D V E I+G+RYG +VP S + E +K
Sbjct: 277 TVVD----AKTLKKEDIQKETVYCLNDDDETEVLKEDIIQGFRYGSDIVPFSKVDEEQMK 332
Query: 300 FKPE-KSVKLLGFTDASNILRHYYMKDVNL-FIAEPGNSRATVAVSALARAMKEMNKVAI 357
+K E K +LGF +S + R ++M + L A + A VA+S+L A+++++ VAI
Sbjct: 333 YKSEGKCFSVLGFCKSSQVQRRFFMGNQVLKVFAARDDEAAAVALSSLIHALEDLDMVAI 392
Query: 358 VRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPN 417
VR + + + + VGV P++ + + LPF ED+R++ F S K + P
Sbjct: 393 VRYAYDK-RANPQVGVAFPHIKHNY---ECLVYVQLPFMEDLRQYMFSSL-KNSKKYAPT 447
Query: 418 EQQQEAADNLVKMLDLAPSGKG-----EILQPELTPNPALERFYHHLELKSEHQDAAPPP 472
E Q A D L+ + LA + ++ PNP +R + L ++ H PP
Sbjct: 448 EAQLNAVDALIDSMSLAKKDEKTDTLEDLFPTTKIPNPRFQRLFQCLLHRALHPREPLPP 507
Query: 473 LDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDG 532
+ + + P + +SQ + F + E K + T + + + + D P
Sbjct: 508 IQQHIWNMLNPPAEVTTKSQIPLSKIKTLFPLIEAKKKDQVTAQDIFQD-NHEDGPTAKK 566
Query: 533 SVSDAQAVN-SMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLL 591
++ + S+ S +V +G + P ++F ++ ++ + E+ N++ +
Sbjct: 567 LKTEQGGAHFSVSSLAEGSVTSVGSVNPAENFRVLVKQKKA------SFEEASNQLINHI 620
Query: 592 E---NSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMS 648
E ++NE + K+++ + A R+ I E ++FN+ L+ + + + + F++ ++
Sbjct: 621 EQFLDTNETPYFMKSMDCIRAFREEAIKFSEEQRFNNFLKALREKVEIKQLNHFWEIVVQ 680
Query: 649 KKLSLISKSEAVDSDITDDEAGSFI 673
++LI+K EA S +T DEA F+
Sbjct: 681 DGITLITKEEAAGSSVTADEAKKFL 705
>gi|355750820|gb|EHH55147.1| hypothetical protein EGM_04294, partial [Macaca fascicularis]
Length = 729
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 168/745 (22%), Positives = 327/745 (43%), Gaps = 112/745 (15%)
Query: 1 MART--REALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFG 51
M R+ + A++L +DV +M + +P VE K+ + +Q+++ E+ ++LFG
Sbjct: 1 MVRSGNKAAVVLCMDVGFTMSNSIPGVESPFEQAKKVITMFVQRQVFAENKDEIALVLFG 60
Query: 52 TEETENELTKEVGG--YEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDYM--LI----- 101
T+ T+N L+ GG Y+++ V + + + D L++ ++ Q G+ D++ LI
Sbjct: 61 TDGTDNPLS---GGDQYQNITVHRHLMLPDFDLLEDIESKIQPGSQQADFLDALIVSMDV 117
Query: 102 ---KKYGETYKGKKHLCLITD------------ALCPLKDPDV----------------G 130
+ G+ ++ K+H+ + TD + LK D+ G
Sbjct: 118 IQHETIGKKFE-KRHIEIFTDLSSRFSKSQLDIIIHSLKKCDISLQFFLPFSLGMEDGSG 176
Query: 131 TKEDQVSTIARQMVAF-----------GLRMKNIVVRASLSGEPHMRVIIENDNLLNIFS 179
+ D + +F GL + +V+ SL GE D L I+S
Sbjct: 177 DRGDGTFRLGGHGPSFPPKGITEQQKEGLEIVKMVM-ISLEGE---------DGLDEIYS 226
Query: 180 KKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLK 239
S + L V + + P L + + I++ YK +E+
Sbjct: 227 FSESLRKLCV-----FKKIERHSIHWPCR-----LTIGSNLSIRIAAYKSILQERVKKTW 276
Query: 240 KYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVK 299
D +++ + Y +D V E I+G+RYG +VP S + E +K
Sbjct: 277 TVVD----AKTLKKEDIQKETVYCLNDDDETEVLKEDIIQGFRYGSDIVPFSKVDEEQMK 332
Query: 300 FKPE-KSVKLLGFTDASNILRHYYMKDVNL-FIAEPGNSRATVAVSALARAMKEMNKVAI 357
+K E K +LGF +S + R ++M + L A + A VA+S+L A+++++ VAI
Sbjct: 333 YKSEGKCFSVLGFCKSSQVQRRFFMGNQVLKVFAARDDEAAAVALSSLIHALEDLDMVAI 392
Query: 358 VRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPN 417
VR + + + + VGV P++ + + LPF ED+R++ F S K + P
Sbjct: 393 VRYAYDK-RANPQVGVAFPHIKHNY---ECLVYVQLPFMEDLRQYMFSSL-KNSKKYAPT 447
Query: 418 EQQQEAADNLVKMLDLAPSGKG-----EILQPELTPNPALERFYHHLELKSEHQDAAPPP 472
E Q A D L+ + LA + ++ PNP +R + L ++ H PP
Sbjct: 448 EAQLNAVDALIDSMSLAKKDEKTDTLEDLFPTTKIPNPRFQRLFQCLLHRALHPREPLPP 507
Query: 473 LDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDG 532
+ + + P + +SQ + F + E K + T + + + + D P
Sbjct: 508 IQQHIWNMLNPPAEVTTKSQIPLSKIKTLFPLIEAKKKDQVTAQDIFQD-NHEDGPTAKK 566
Query: 533 SVSDAQAVN-SMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLL 591
++ + S+ S +V +G + P ++F ++ ++ + E+ N++ +
Sbjct: 567 LKTEQGGAHFSVSSLAEGSVTSVGSVNPAENFRVLVKQKKA------SFEEASNQLINHI 620
Query: 592 E---NSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMS 648
E ++NE + K+++ + A R+ I E ++FN+ L+ + + + + F++ ++
Sbjct: 621 EQFLDTNETPYFMKSMDCIRAFREEAIKFSEEQRFNNFLKALREKVEIKQLNHFWEIVVQ 680
Query: 649 KKLSLISKSEAVDSDITDDEAGSFI 673
++LI+K EA S +T DEA F+
Sbjct: 681 DGITLITKEEASGSSVTADEAKKFL 705
>gi|383276559|ref|NP_001244295.1| X-ray repair cross-complementing protein 5 [Macaca mulatta]
gi|380816286|gb|AFE80017.1| X-ray repair cross-complementing protein 5 [Macaca mulatta]
Length = 732
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 168/745 (22%), Positives = 327/745 (43%), Gaps = 112/745 (15%)
Query: 1 MART--REALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFG 51
M R+ + A++L +DV +M + +P VE K+ + +Q+++ E+ ++LFG
Sbjct: 1 MVRSGNKAAVVLCMDVGFTMSNSIPGVESPFEQAKKVITMFVQRQVFAENKDEIALVLFG 60
Query: 52 TEETENELTKEVGG--YEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDYM--LI----- 101
T+ T+N L+ GG Y+++ V + + + D L++ ++ Q G+ D++ LI
Sbjct: 61 TDGTDNPLS---GGDQYQNITVHRHLMLPDFDLLEDIESKIQPGSQQADFLDALIVSMDV 117
Query: 102 ---KKYGETYKGKKHLCLITD------------ALCPLKDPDV----------------G 130
+ G+ ++ K+H+ + TD + LK D+ G
Sbjct: 118 IQHETIGKKFE-KRHIEIFTDLSSRFSKSQLDIIIHSLKKCDISLQFFLPFSLGMEDGSG 176
Query: 131 TKEDQVSTIARQMVAF-----------GLRMKNIVVRASLSGEPHMRVIIENDNLLNIFS 179
+ D + +F GL + +V+ SL GE D L I+S
Sbjct: 177 DRGDGTFRLGGHGPSFPLKGITEQQKEGLEIVKMVM-ISLEGE---------DGLDEIYS 226
Query: 180 KKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLK 239
S + L V + + P L + + I++ YK +E+
Sbjct: 227 FSESLRKLCV-----FKKIERHSIHWPCR-----LTIGSNLSIRIAAYKSILQERVKKTW 276
Query: 240 KYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVK 299
D +++ + Y +D V E I+G+RYG +VP S + E +K
Sbjct: 277 TVVD----AKTLKKEDIQKETVYCLNDDDETEVLKEDIIQGFRYGSDIVPFSKVDEEQMK 332
Query: 300 FKPE-KSVKLLGFTDASNILRHYYMKDVNL-FIAEPGNSRATVAVSALARAMKEMNKVAI 357
+K E K +LGF +S + R ++M + L A + A VA+S+L A+++++ VAI
Sbjct: 333 YKSEGKCFSVLGFCKSSQVQRRFFMGNQVLKVFAARDDEAAAVALSSLIHALEDLDMVAI 392
Query: 358 VRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPN 417
VR + + + + VGV P++ + + LPF ED+R++ F S K + P
Sbjct: 393 VRYAYDK-RANPQVGVAFPHIKHNC---ECLVYVQLPFMEDLRQYMFSSL-KNSKKYAPT 447
Query: 418 EQQQEAADNLVKMLDLAPSGKG-----EILQPELTPNPALERFYHHLELKSEHQDAAPPP 472
E Q A D L+ + LA + ++ PNP +R + L ++ H PP
Sbjct: 448 EAQLNAVDALIDSMSLAKKDEKTDTLEDLFPTTKIPNPRFQRLFQCLLHRALHPREPLPP 507
Query: 473 LDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDG 532
+ + + P + +SQ + F + E K + T + + + + D P
Sbjct: 508 IQQHIWNMLNPPAEVTTKSQIPLSKIKTLFPLIEAKKKDQVTAQDIFQD-NHEDGPTAKK 566
Query: 533 SVSDAQAVN-SMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLL 591
++ + S+ S +V +G + P ++F ++ ++ + E+ N++ +
Sbjct: 567 LKTEQGGAHFSVSSLAEGSVTSVGSVNPAENFRVLVKQKKA------SFEEASNQLINHI 620
Query: 592 E---NSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMS 648
E ++NE + K+++ + A R+ I E ++FN+ L+ + + + + F++ ++
Sbjct: 621 EQFLDTNETPYFMKSMDCIRAFREEAIKFSEEQRFNNFLKALREKVEIKQLNHFWEIVVQ 680
Query: 649 KKLSLISKSEAVDSDITDDEAGSFI 673
++LI+K EA S +T DEA F+
Sbjct: 681 DGITLITKEEASGSSVTADEAKKFL 705
>gi|383421375|gb|AFH33901.1| X-ray repair cross-complementing protein 5 [Macaca mulatta]
gi|384949286|gb|AFI38248.1| X-ray repair cross-complementing protein 5 [Macaca mulatta]
Length = 732
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 168/745 (22%), Positives = 327/745 (43%), Gaps = 112/745 (15%)
Query: 1 MART--REALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFG 51
M R+ + A++L +DV +M + +P VE K+ + +Q+++ E+ ++LFG
Sbjct: 1 MVRSGNKAAVVLCMDVGFTMSNSIPGVESPFEQAKKVITMFVQRQVFAENKDEIALVLFG 60
Query: 52 TEETENELTKEVGG--YEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDYM--LI----- 101
T+ T+N L+ GG Y+++ V + + + D L++ ++ Q G+ D++ LI
Sbjct: 61 TDGTDNPLS---GGDQYQNITVHRHLMLPDFDLLEDIESKIQPGSQQADFLDALIVSMDV 117
Query: 102 ---KKYGETYKGKKHLCLITD------------ALCPLKDPDV----------------G 130
+ G+ ++ K+H+ + TD + LK D+ G
Sbjct: 118 IQHETIGKKFE-KRHIEIFTDLSSRFSKSQLDIIIHSLKKCDISLQFFLPFSLGMEDGSG 176
Query: 131 TKEDQVSTIARQMVAF-----------GLRMKNIVVRASLSGEPHMRVIIENDNLLNIFS 179
+ D + +F GL + +V+ SL GE D L I+S
Sbjct: 177 DRGDGTFRLGGHGPSFPLKGITEQQKEGLEIVKMVM-ISLEGE---------DGLDEIYS 226
Query: 180 KKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLK 239
S + L V + + P L + + I++ YK +E+
Sbjct: 227 FSESLRKLCV-----FKKIERHSIHWPCR-----LTIGSNLSIRIAAYKSILQERVKKTW 276
Query: 240 KYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVK 299
D +++ + Y +D V E I+G+RYG +VP S + E +K
Sbjct: 277 TVVD----AKTLKKEDIQKETVYCLNDDDETEVLKEDIIQGFRYGSDIVPFSKVDEEQMK 332
Query: 300 FKPE-KSVKLLGFTDASNILRHYYMKDVNL-FIAEPGNSRATVAVSALARAMKEMNKVAI 357
+K E K +LGF +S + R ++M + L A + A VA+S+L A+++++ VAI
Sbjct: 333 YKSEGKCFSVLGFCKSSQVQRRFFMGNQVLKVFAARDDEAAAVALSSLIHALEDLDMVAI 392
Query: 358 VRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPN 417
VR + + + + VGV P++ + + LPF ED+R++ F S K + P
Sbjct: 393 VRYAYDK-RANPQVGVAFPHIKHNY---ECLVYVQLPFMEDLRQYMFSSL-KNSKKYAPT 447
Query: 418 EQQQEAADNLVKMLDLAPSGKG-----EILQPELTPNPALERFYHHLELKSEHQDAAPPP 472
E Q A D L+ + LA + ++ PNP +R + L ++ H PP
Sbjct: 448 EAQLNAVDALIDSMSLAKKDEKTDTLEDLFPTTKIPNPRFQRLFQCLLHRALHPREPLPP 507
Query: 473 LDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDG 532
+ + + P + +SQ + F + E K + T + + + + D P
Sbjct: 508 IQQHIWNMLNPPAEVTTKSQIPLSKIKTLFPLIEAKKKDQVTAQDIFQD-NHEDGPTAKK 566
Query: 533 SVSDAQAVN-SMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLL 591
++ + S+ S +V +G + P ++F ++ ++ + E+ N++ +
Sbjct: 567 LKTEQGGAHFSVSSLAEGSVTSVGSVNPAENFRVLVKQKKA------SFEEASNQLINHI 620
Query: 592 E---NSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMS 648
E ++NE + K+++ + A R+ I E ++FN+ L+ + + + + F++ ++
Sbjct: 621 EQFLDTNETPYFMKSMDCIRAFREEAIKFSEEQRFNNFLKALREKVEIKQLNHFWEIVVQ 680
Query: 649 KKLSLISKSEAVDSDITDDEAGSFI 673
++LI+K EA S +T DEA F+
Sbjct: 681 DGITLITKEEASGSSVTADEAKKFL 705
>gi|338725581|ref|XP_001489450.3| PREDICTED: x-ray repair cross-complementing protein 5 [Equus
caballus]
Length = 776
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 171/753 (22%), Positives = 322/753 (42%), Gaps = 109/753 (14%)
Query: 1 MAR--TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFG 51
MAR ++ A++L +DV +M + P E K+ + +Q+++ E+ ++LFG
Sbjct: 1 MARWGSKAAVVLCIDVGFAMSNSFPGEESPFELAKKVMTMFVQRQVFAESKDEIALVLFG 60
Query: 52 TEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDYM--------LIK 102
T+ T+N L E Y+++ V + + + D L++ ++ Q G+ D++ +I+
Sbjct: 61 TDGTKNALAGE-DQYQNITVHRHLMLPDFDLLEDIESKIQPGSRQADFLDALIVCMDVIQ 119
Query: 103 K--YGETYKGKKHLCLITDALCPL-KDP-DVGTKEDQVSTIARQMV-------------- 144
+ G+ ++ KKH+ + TD P KD D+ + S+I+ Q
Sbjct: 120 RETVGKKFE-KKHIEVFTDLSSPFSKDQLDIIIHNLKKSSISLQFFLPFPIGKEDGTGDR 178
Query: 145 ----------AFGLRMKNIV------------VRASLSGEPHMRVIIENDNLLNIFSKKS 182
+K I V SL GE + L I+S
Sbjct: 179 GDGNLGSDHHGLDFPLKGITEQQKEGIQMVKKVMMSLEGE---------EGLDEIYSFSE 229
Query: 183 SAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYS 242
S + L V R + L + + IK+ YK +EK K S
Sbjct: 230 SLRRLCVFKKIERRS----------IPWACQLTIGSNLSIKIVAYKSIVQEKV----KKS 275
Query: 243 DKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKP 302
+V+ + Y +D VP E+ I+GYRYG ++P S + E +K+K
Sbjct: 276 WTVVDARTVKKEDVQKETVYCLNDDDETEVPKEETIQGYRYGSDIIPFSKVDEEQMKYKS 335
Query: 303 E-KSVKLLGFTDASNILRHYYMKDVNL-FIAEPGNSRATVAVSALARAMKEMNKVAIVRC 360
E K +LGF +S + R Y+M + L A + A VA+S+L A+ E++ VA+VR
Sbjct: 336 EGKCFSVLGFCRSSQVHRRYFMGNQVLKVFAARDDKAAAVALSSLIHALDELDMVAVVRY 395
Query: 361 VWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQ 420
V+ + + + VGV P + + + + LPF ED+R++ F S K P E Q
Sbjct: 396 VYDR-RANPQVGVAFPCIKDTY---ECLVYVQLPFMEDLRQYMFSSL-KNNKKCTPTEAQ 450
Query: 421 QEAADNLVKMLDLAPSGKGEILQPEL-----TPNPALERFYHHLELKSEHQDAAPPPLDD 475
A L+ + L + E +L PNP +R + L ++ H PP+
Sbjct: 451 LSAVGALIDSMSLVKKDEEENTIEDLFPTTKIPNPEFQRLFQCLLHRALHPQEPLPPIQQ 510
Query: 476 SLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDG--- 532
+ + +P + + Q + F + E +KK + ++ S + E
Sbjct: 511 HILNMLDPPTEVTTKCQVPLSKIKTLFPLTE--AIKKKDQVTAQDVFSDNHEEGPTSKKF 568
Query: 533 SVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLE 592
+A+ S+ S + +G + P ++F ++ +++ + E+ +++ +E
Sbjct: 569 KTEEAEVSFSISSLAEGRITSVGSVNPAENFRVLVRQKNA------SFEEASHQLIKHIE 622
Query: 593 ---NSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSK 649
++NE + K+++ + R+ I E ++FN L + + + F++ ++
Sbjct: 623 QFLDTNETPYFMKSMDCIRVFREEAIESSEEQRFNSFLRALRERVEAKQLHHFWEIVIQD 682
Query: 650 KLSLISKSEAVDSDITDDEAGSFIVKSQPKHED 682
++LI++ EA S +T +EA F+ + ED
Sbjct: 683 GITLITQDEASGSSVTAEEAKKFLAPRENPKED 715
>gi|197100259|ref|NP_001126362.1| X-ray repair cross-complementing protein 5 [Pongo abelii]
gi|55731214|emb|CAH92321.1| hypothetical protein [Pongo abelii]
Length = 732
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 167/745 (22%), Positives = 327/745 (43%), Gaps = 112/745 (15%)
Query: 1 MART--REALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFG 51
M R+ + A++L +DV +M + +P +E K+ + +Q+++ E+ ++LFG
Sbjct: 1 MVRSGNKAAVVLCMDVGFTMSNSIPGIESPFEQAKKVITMFVQRQVFAENKDEIALVLFG 60
Query: 52 TEETENELTKEVGG--YEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDYM--LI----- 101
T+ T+N L+ GG Y+++ V + + + D L++ ++ Q G+ D++ LI
Sbjct: 61 TDGTDNPLS---GGDQYQNITVHRHLMLPDFDLLEDIESKIQPGSQQADFLDALIVSMDV 117
Query: 102 ---KKYGETYKGKKHLCLITD------------ALCPLKDPDV----------------G 130
+ G+ ++ K+H+ + TD + LK D+ G
Sbjct: 118 IQHETIGKKFE-KRHIEIFTDLSSRFSKSQLDIIIHSLKKCDISLQFFLPFSLGKEDGSG 176
Query: 131 TKEDQVSTIARQMVAF-----------GLRMKNIVVRASLSGEPHMRVIIENDNLLNIFS 179
+ D + +F GL + +V+ SL GE D L I+S
Sbjct: 177 DRGDGTFRLGGHGPSFPLKGITEQQKEGLEIVKMVM-ISLEGE---------DGLDEIYS 226
Query: 180 KKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLK 239
S + L V + + P L + + I++ YK +E+
Sbjct: 227 FSESLRKLCV-----FKKIERHSIHWPCR-----LTIGSNLSIRIAAYKSILQERVKKTW 276
Query: 240 KYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVK 299
D +++ + Y +D V E I+G+RYG +VP S A+ E +K
Sbjct: 277 TVVD----AKTLKKEDIQKETVYCLNDDDETEVLKEDIIQGFRYGSDIVPFSKADEEQMK 332
Query: 300 FKPE-KSVKLLGFTDASNILRHYYMKDVNL-FIAEPGNSRATVAVSALARAMKEMNKVAI 357
+K E K +LGF +S + R ++M + L A + A VA+S+L A+ +++ VAI
Sbjct: 333 YKSEGKCFSVLGFCKSSQVQRRFFMGNQVLKVFAARDDEAAAVALSSLIHALDDLDMVAI 392
Query: 358 VRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPN 417
VR + + + + VGV P++ + + LPF ED+R++ F S K + P
Sbjct: 393 VRYAYDK-RANPQVGVAFPHIKHNY---ECLVYVQLPFMEDLRQYMFSSL-KNSKKYAPT 447
Query: 418 EQQQEAADNLVKMLDLAPSGKG-----EILQPELTPNPALERFYHHLELKSEHQDAAPPP 472
E Q A D L+ + LA + ++ PNP +R + L ++ H PP
Sbjct: 448 EAQLNAVDALIDSMSLAKKDEKTDTLEDLFPTTKIPNPRFQRLFQCLLHRALHPREPLPP 507
Query: 473 LDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDG 532
+ + + P + +SQ + F + E K + T + + + + D P
Sbjct: 508 IQQHIWNMLNPPAEVTTKSQIPLSKIKTLFPLIEAKKKDQVTAQDIFQD-NHEDGPTAKK 566
Query: 533 SVSDAQAVN-SMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLL 591
++ + S+ S +V +G + P ++F ++ ++ + E+ N++ +
Sbjct: 567 LKTEQGGAHFSVSSLAEGSVTSVGSVNPAENFRVLVKQKKA------SFEEASNQLINHI 620
Query: 592 E---NSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMS 648
E ++NE + K+++ + A R+ I E ++FN+ L+ + + + + F++ ++
Sbjct: 621 EQFLDTNETPYFMKSMDCIRAFREEAIKFSEEQRFNNFLKALREKVEVKQLNHFWEIVVQ 680
Query: 649 KKLSLISKSEAVDSDITDDEAGSFI 673
++LI+K EA S +T +EA F+
Sbjct: 681 DGITLITKEEASGSSVTAEEAKKFL 705
>gi|355729443|gb|AES09870.1| X-ray repair complementing defective repair in Chinese hamster
cells 5 [Mustela putorius furo]
Length = 697
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 167/727 (22%), Positives = 315/727 (43%), Gaps = 93/727 (12%)
Query: 5 REALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETEN 57
+ A++L +DV +M + LP E K+ + +Q+++ E+ ++LFGT+ TEN
Sbjct: 1 KAAVVLCMDVGSAMSNSLPGEESPFELARKVMTMFVQRQVFAESRDEIALVLFGTDGTEN 60
Query: 58 ELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDYM--LI--------KKYGE 106
L + Y+++ V + + + D L++ ++ Q G+ D++ LI + G+
Sbjct: 61 ALAGK-DQYQNITVHRHLMLPDFDLLEDIERKIQPGSQQADFLDALIVCMDVIQQETVGK 119
Query: 107 TYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV------------ 154
++ K+H+ + TD P +DQ+ I + FG+ ++ +
Sbjct: 120 KFE-KRHIEVFTDLSSPFS-------KDQLDVIIHNLKKFGISLQFFLPFPVGKEDGTGD 171
Query: 155 -----VRASLSGEPH-MRVIIEN------------------DNLLNIFSKKSSAKTLFVD 190
R+ G ++ I E D L I+S S + L V
Sbjct: 172 RGDGNARSDHHGPSFPLKGITEQQKEGVRMVKKVMMSLEGEDGLDEIYSFSESLRQLCVF 231
Query: 191 STTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDK 250
R + L + + IK+ YK +E+ K S
Sbjct: 232 KKIEKRSIP----------WHCTLTIGSSLSIKIVAYKSIIQERV----KKSWTVVDART 277
Query: 251 FATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLL 309
+++ + Y +D V E I+G+RYG +VP S + E +K+K E K +L
Sbjct: 278 LKKEDLQKETVYCLNDDNETEVLKEDTIQGFRYGSDIVPFSKVDEELMKYKSEGKCFSVL 337
Query: 310 GFTDASNILRHYYMKDVNL-FIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQS 368
GF +S + R Y+M + L A + A VA+S+L A+ E++ VA+VR V+ + + +
Sbjct: 338 GFCRSSQVHRRYFMGNQVLKVFAAADDEAAAVALSSLIHALDELDMVAVVRYVYDK-RAN 396
Query: 369 VVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV 428
VG+ P + + + + LPF ED+R++ F S K + P E Q A D L+
Sbjct: 397 PQVGMAFPYIKDTY---ECLIYVQLPFMEDLRQYMFSSL-KNNKKYIPTEAQLSAVDALI 452
Query: 429 KMLDLAPSGKGEILQPEL-----TPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEP 483
+ L G E +L PNP +R + L ++ H PP+ + + +P
Sbjct: 453 DSMSLVKKGDKEDTIEDLFPTSKIPNPQFQRLFQCLLHRALHPRERLPPIQQHILNMLDP 512
Query: 484 DPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVN-S 542
+ A+ Q + F + E K K + + + P ++ A + S
Sbjct: 513 PTEVTAQCQIPLSKIKTIFPLTEAIKKKDQVTAQDIFQDNHEEGPTSKKLKTEEGAADFS 572
Query: 543 MESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPK 602
+ S +V +G + P ++F ++ ++ ++A + N+I LE +NE + K
Sbjct: 573 VSSLAEGSVTSVGSVNPAENFRVLVRQKKAS--FEEASHQLINRIEQFLE-TNETPYFMK 629
Query: 603 AVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKKLSLISKSEAVDS 662
+++ + R+ I E ++FND L + + + + F++ ++ ++LI+K EA S
Sbjct: 630 SMDCITVFREEAIQFSEEQRFNDFLRALREKVEMKQLNHFWEIVVQDGITLITKDEAPGS 689
Query: 663 DITDDEA 669
+T +EA
Sbjct: 690 SVTAEEA 696
>gi|367027154|ref|XP_003662861.1| hypothetical protein MYCTH_2118116 [Myceliophthora thermophila ATCC
42464]
gi|347010130|gb|AEO57616.1| hypothetical protein MYCTH_2118116 [Myceliophthora thermophila ATCC
42464]
Length = 721
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 167/698 (23%), Positives = 297/698 (42%), Gaps = 93/698 (13%)
Query: 41 KNHEVGVILFGTEETENELTKE-VGGYEHVKVLQDIKVVDGHLVQSLKH--LPQGTCAGD 97
K VGV+ TEET N E + GYEH+ VLQ I + ++ L+ L T GD
Sbjct: 49 KTWTVGVVGLNTEETVNAQHSEGLEGYEHISVLQGIGPMTMSSLRDLRSMILSSRTHGGD 108
Query: 98 YM--------LIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLR 149
+ +I+ + + K + + L+T+ P+ D ++++ + ++V G+
Sbjct: 109 AISAIVVALTMIEDFTKKLKYNRKIILVTNGESPIDDESSEEVANRLNELNVELVVVGVD 168
Query: 150 MKNIVV--------RASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKT 201
+ R + E +R ++E N + + + + L + +
Sbjct: 169 FDDPDYGYKEEDKSRGKANNEKILRKLVEQCNSGVFGTMQQAVEELAIP---------RI 219
Query: 202 RDISPVTIFRGDLELSEKMK------IKVWVYKKTGEEKFPTLKKY----------SDKA 245
+ + P + G L L + K I V Y KT PT +A
Sbjct: 220 KPVRPFKAYDGPLTLGDPQKYQSALSIHVERYFKTKRAVPPTASTVVTNPERGGPSQPQA 279
Query: 246 PSTD------KFATHEVKVDYEYKSVEDPS-----KVVPPEQRIKGYRYGPQVVPISSAE 294
P D +F+ + Y +V+DP + V E+ KGY+YG VVP S ++
Sbjct: 280 PGEDIVMGGTEFSGVKHMRTY---TVDDPDAPGGKRDVDFEELAKGYQYGRTVVPFSESD 336
Query: 295 WEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNK 354
+ K + +KS ++GF S+ + M + + +A+ N A + +SAL A+ E+
Sbjct: 337 FSVTKLETKKSFTIIGFIPFSSYSQFINMGETGVVVAQKHNEEAELGLSALIHALHELES 396
Query: 355 VAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK-FPVS 413
A+ R V + G Q ++ +L PN + + + + Y LPFAEDVR +QFP K V+
Sbjct: 397 YAVARYVQKDGTQPQIL-LLKPNPALEDDF-ECLYDVPLPFAEDVRSYQFPPLDKVLTVT 454
Query: 414 WQ--------PNEQQQEAADNLVKMLDLAPSGKGEILQP-ELTP-----NPALERFYHHL 459
P+E ++A + V +DL E +P E P NP + R +
Sbjct: 455 GNVIKEHRLLPSEDLKQAMSDFVDAMDLTGFDVDEEGKPVEYAPIDELYNPVIHRLNQAI 514
Query: 460 ELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLR 519
++ D+ P + L + ++P LL ++++ IDA +K+ P K RR
Sbjct: 515 RARAVDPDSPIGPPAEILLRFSKPPEKLLDKAKAEIDALIDAAEVKKVPA-KAQGRR--- 570
Query: 520 EKPSGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKA 579
G EP S D A+ + ++ D + +F+ +++ ++ A
Sbjct: 571 ----GRKEPVKPLSGLDIDALLGENKRTTISSD-----NAVPEFKQILATASDDATIESA 621
Query: 580 IEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNF 639
+ M I L+ +S G+NY +A E L +R+ I + P +N L + K
Sbjct: 622 AKQMGEIIRKLIRDSFAGLNYARAAENLRVMREELIALEVPGLYNKFLTGLKKSILSGEL 681
Query: 640 -----STFFDFLMSKKLSLISKSEAVDSDITDDEAGSF 672
+F ++ L LIS+ E+ S++T +EA ++
Sbjct: 682 DGDRREMWFKHIIGGHLGLISRDESEVSEVTAEEARAY 719
>gi|336273738|ref|XP_003351623.1| hypothetical protein SMAC_00164 [Sordaria macrospora k-hell]
gi|380095902|emb|CCC05949.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 724
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 166/695 (23%), Positives = 300/695 (43%), Gaps = 82/695 (11%)
Query: 41 KNHEVGVILFGTEETEN-ELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGD 97
K VGV+ T+ET+N E +E GYE++ VLQ++ + +++LK P T + D
Sbjct: 49 KTWNVGVVGLNTDETDNNENREEYQGYENISVLQELGPMSMTSLRALKSQIEPSETSSAD 108
Query: 98 YM--------LIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLR 149
+ +I+ Y + K K+ + L+T+ P+ D ++ + ++V G+
Sbjct: 109 AISAIVVALRMIQVYTKKLKYKRKIILVTNGESPIDDDQSEDVAAMLNNVGIELVVIGID 168
Query: 150 MKNIVVRASLSGEPHMRVIIENDNLLNIFSK--KSSAKTLFVDSTTSLRGARKTRDISPV 207
+ E + EN+ +L ++ + L R + + P
Sbjct: 169 FDD--AEYGFKEEDKTQHKAENERILKTLVDLCENGEFGTMAQAVEELAIPR-IKPVRPF 225
Query: 208 TIFRGDLELSEKMK------IKVWVYKKTGEEKFPTLKKYS-------------DKAPST 248
+ G L L + K I V Y KT P+ + D
Sbjct: 226 KAYDGPLTLGDPQKYPSALSIPVERYFKTKRATPPSASNVAIHTGPPQAEVIDEDSGAPM 285
Query: 249 DKFATHEVKVDYEYKSVEDPS-----KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE 303
VK Y+ V+D K + E K Y+YG VVP S++E + VK++
Sbjct: 286 SGVEFQPVKQLRTYR-VDDAKAAGGKKDIEMEDLAKAYQYGRTVVPFSTSEEDYVKYQTT 344
Query: 304 KSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWR 363
KS ++GF S+ M + L +A+ N +A + +SAL A+ E+ A+ R V +
Sbjct: 345 KSFTIIGFVPMSSYEPFINMGETGLIVAQKVNEQAELGLSALIHALHELESYAVARYVNK 404
Query: 364 QGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPV---------SW 414
++ +L PN + + ++ + Y LPFAEDVR +QFP K
Sbjct: 405 DKAAPQIL-LLKPNPAIEDDV-ECLYDVPLPFAEDVRSYQFPPLDKVLTITGNVLTEHRL 462
Query: 415 QPNEQQQEAADNLVKMLDLAPSGKGEILQP-ELTP-----NPALERFYHHLELKSEHQDA 468
PN+ Q+A + V +DL G+ E P E P NP + ++ + +A
Sbjct: 463 LPNDDLQQAMGDYVDAMDLTDFGQDEDGNPAEYAPIDDVYNPVIHHMNQATRNRAVNPEA 522
Query: 469 APPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKE-NPKLKKSTRRFLREKP-SGSD 526
PP+ D L + T P L+A+++S I+ +K+ PK++ R KP SG D
Sbjct: 523 PLPPVADILTRFTHPPEPLIAKAKSEINGLIEAAEVKKVPPKVQGKRGRKDTVKPLSGLD 582
Query: 527 EPNGDGSVSDAQAVNSM--ESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMK 584
++++ +++P I I +F+ ++ + + ++ A + M
Sbjct: 583 -------------IDALLGKTRPRAKKTPISAENAIPEFKQILETAEDDETIETAAKQMG 629
Query: 585 NKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKV------CKICRKRN 638
+ I L+ +S + YP+A E L +R+ I + P +N L ++ K+ R
Sbjct: 630 DIIRKLISDSFADVLYPRAAENLRVMREELISMEVPTLYNTYLTELKDSLLSGKLNGDRR 689
Query: 639 FSTFFDFLMSKKLSLISKSEAVDSDITDDEAGSFI 673
+F +++ +L LI++ E+ S++ +DEA +F+
Sbjct: 690 -EMWFRWVVGGRLGLITQDESEVSEVGEDEAKAFL 723
>gi|156371370|ref|XP_001628737.1| predicted protein [Nematostella vectensis]
gi|156215721|gb|EDO36674.1| predicted protein [Nematostella vectensis]
Length = 483
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 105/358 (29%), Positives = 177/358 (49%), Gaps = 31/358 (8%)
Query: 232 EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS 291
EEK + KK S A ++ + EV ++ Y ++ + E +GYRYG +VP++
Sbjct: 65 EEKLASWKKLSAIAQASPNSDSMEVTMERTYHRNDEDQTEIEKENVAQGYRYGKTIVPLT 124
Query: 292 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYM-KDVNLFIAEPGNSRATVAVSALARAMK 350
+ E +K + EK + +LGF+ NI RH+Y+ ++V F A+P + A++A+SA AM
Sbjct: 125 KIDKEGMKLETEKCLSVLGFSHKDNIKRHHYIGENVTAFTAQPEDEHASIALSAFINAMH 184
Query: 351 EMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKF 410
+ VAIVR +R+ + +G L+P++ E+ + F LPFAED+R F F S
Sbjct: 185 RSDTVAIVRYCFRK-NAAPKLGFLSPHIKEEY---ECLLFTALPFAEDLRHFSFASLDGN 240
Query: 411 PVSWQPNEQQQEAADNLVKMLDLAPSGKGEI------LQPELTPNPALERFYHHLELKSE 464
QP E Q A D+L+ ++DL+ + + E L+P+ T NP +R + ++ ++
Sbjct: 241 K-KLQPTEDQLRAIDDLITVMDLSKAQRDEYGEATEALKPKCTFNPTRQRVFQCIQHRAL 299
Query: 465 H-QDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPS 523
H D + P L+ ++ EP AE S + C +K+ L+K R+ +E +
Sbjct: 300 HPNDPSLPSLEPAIASYLEPS----AEFLSVREPQC--LRVKDYFPLEKVERKKAKESAA 353
Query: 524 GSDEPNGDGSVSDAQAVN------------SMESKPVVTVDKIGDLTPIQDFEAMMSR 569
+ N D D A SM TV ++G + P+ DF ++ R
Sbjct: 354 EIFKSNVDQHKLDEPAQKRAWLEPGDEVDFSMAGLAKGTVTEVGTVDPVSDFLTIIGR 411
>gi|332209991|ref|XP_003254095.1| PREDICTED: X-ray repair cross-complementing protein 5 [Nomascus
leucogenys]
Length = 732
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 166/745 (22%), Positives = 326/745 (43%), Gaps = 112/745 (15%)
Query: 1 MART--REALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFG 51
M R+ + A++L +DV +M + +P +E K+ + +Q+++ E+ ++LFG
Sbjct: 1 MVRSGNKAAVVLCMDVGFTMSNSIPGIESPFEQAKKVITMFVQRQVFAENKDEIALVLFG 60
Query: 52 TEETENELTKEVGG--YEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDYM--LI----- 101
T+ T+N L+ GG Y+++ V + + + D L++ ++ Q G+ D++ LI
Sbjct: 61 TDGTDNPLS---GGDQYQNITVHRHLMLPDFDLLEDIESKIQPGSQQADFLDALIVSMDV 117
Query: 102 ---KKYGETYKGKKHLCLITD------------ALCPLKDPDV----------------G 130
+ G+ ++ K+H+ + TD + LK D+ G
Sbjct: 118 IQHETIGKKFE-KRHIEIFTDLSSRFSKSQLDIIIHSLKKCDISLQFFLPFSLGKEDGSG 176
Query: 131 TKEDQVSTIARQMVAF-----------GLRMKNIVVRASLSGEPHMRVIIENDNLLNIFS 179
+ D + +F GL + +V+ SL GE D L I+S
Sbjct: 177 DRGDGTFRLGGHGPSFPLKGITEQQKEGLEIVKMVM-ISLEGE---------DGLDEIYS 226
Query: 180 KKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLK 239
S + L V + + P L + + I++ YK +E+
Sbjct: 227 FSESLRKLCV-----FKKIERHSIHWPCR-----LTIGSNLSIRIAAYKSILQERVKKTW 276
Query: 240 KYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVK 299
D +++ + Y +D V E I+G+RYG +VP S + E +K
Sbjct: 277 TVVD----AKTLKKEDIQKETVYCLNDDDETEVLKEDIIQGFRYGSDIVPFSKVDEEQMK 332
Query: 300 FKPE-KSVKLLGFTDASNILRHYYMKDVNL-FIAEPGNSRATVAVSALARAMKEMNKVAI 357
+K E K +LGF +S + R ++M + L A + A VA+S+L A+ +++ VAI
Sbjct: 333 YKSEGKCFSVLGFCKSSQVQRRFFMGNQVLKVFAARDDEAAAVALSSLIHALDDLDMVAI 392
Query: 358 VRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPN 417
VR + + + + VGV P++ + + LPF ED+R++ F S K + P
Sbjct: 393 VRYAYDK-RANPQVGVAFPHIKHNY---ECLVYVQLPFMEDLRQYMFSSL-KNSKKYAPT 447
Query: 418 EQQQEAADNLVKMLDLAPSGKG-----EILQPELTPNPALERFYHHLELKSEHQDAAPPP 472
E Q A D L+ + LA + ++ PNP +R + L ++ H PP
Sbjct: 448 EAQLNAVDALIDSMSLAKKDEKTDTLEDLFPTTKIPNPRFQRLFQCLLHRALHPREPLPP 507
Query: 473 LDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDG 532
+ + + P + +SQ + F + E K + T + + + + D P
Sbjct: 508 IQQHIWNMLNPPAEVTTKSQIPLSKIKTLFPLIEAKKKDQVTAQDIFQD-NHEDGPTAKK 566
Query: 533 SVSDAQAVN-SMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLL 591
++ + S+ S +V +G + P ++F ++ ++ + E+ N++ +
Sbjct: 567 LKTEQGGAHFSVSSLAEGSVTSVGSVNPAENFRVLVKQKKA------SFEEASNQLINHI 620
Query: 592 E---NSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMS 648
E ++NE + K+++ + A R+ I E ++FN+ L+ + + + + F++ ++
Sbjct: 621 EQFLDTNETPYFMKSMDCIRAFREEAIKFSEEQRFNNFLKALREKVEIKQLNHFWEIVVQ 680
Query: 649 KKLSLISKSEAVDSDITDDEAGSFI 673
++LI+K EA S +T +EA F+
Sbjct: 681 DGITLITKEEASGSSVTAEEAKKFL 705
>gi|350537451|ref|NP_001233669.1| X-ray repair cross-complementing protein 5 precursor [Cricetulus
griseus]
gi|1044791|gb|AAA80450.1| Ku (p70/p80) protein [Cricetulus griseus]
gi|1589660|prf||2211394A Ku86 protein
Length = 732
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 171/759 (22%), Positives = 312/759 (41%), Gaps = 129/759 (16%)
Query: 4 TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
+ A++L +DV +M + P E K+ + +Q+++ E+ ++LFGT+ T
Sbjct: 6 NKAAVVLCMDVGVAMGNSFPGEESSFEQAKKVMTMFVQRQVFSESKDEIALVLFGTDNTN 65
Query: 57 NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDYM--------LIKK--YG 105
N L E Y+++ V + + + D L++ ++ Q G+ D + LI++ G
Sbjct: 66 NALASE-DQYQNITVHRHLMLPDFDLLEDIESKIQLGSRQADILDALIVCMDLIQRETIG 124
Query: 106 ETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV----------- 154
+ ++ KKH+ + TD P +DQ+ I + G+ ++ +
Sbjct: 125 KKFE-KKHIEVFTDLSSPFS-------QDQLDVIICNLKKSGISLQFFLPFPISKNDETG 176
Query: 155 ----------------------------------VRASLSGEPHMRVIIENDNLLNIFSK 180
V SL GE D L I+S
Sbjct: 177 DRGDGDLGLDHCGPSFPQKGITEQQKEGICMVERVMVSLEGE---------DGLDEIYSF 227
Query: 181 KSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKK 240
S + L V R + L + + IK+ YK +EK K
Sbjct: 228 SESLRRLCVFKKIERRSMP----------WSCQLTIGPDLSIKIVAYKSIVQEKV----K 273
Query: 241 YSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKF 300
S +++ + Y +D V E I+G+RYG ++P S + E +K+
Sbjct: 274 KSWIVVDARTLKKEDIRKETVYCLNDDDETEVSKEDTIQGFRYGSDIIPFSKVDEEQMKY 333
Query: 301 KPE-KSVKLLGFTDASNILRHYYMK-DVNLFIAEPGNSRATVAVSALARAMKEMNKVAIV 358
K E K +LGF +S + R ++M V A + A VA+S+L A+ E+N VAIV
Sbjct: 334 KSEGKCFSVLGFCRSSQVHRRFFMGYQVLKVFAAKDDEAAAVALSSLIHALDELNMVAIV 393
Query: 359 RCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNE 418
R + + + + VGV P + + + + LPF ED+R++ F S K P E
Sbjct: 394 RYAYDK-RANPQVGVAFPYIKDSY---ECLVYVQLPFMEDLRQYMFSSL-KNNKKCTPTE 448
Query: 419 QQQEAADNLVKMLDLAPSGKGEILQPEL-----TPNPALERFYHHLELKSEHQDAAPPPL 473
Q A D+L++ + L + E +L PNP +RF+ L + H PP+
Sbjct: 449 AQLSAIDDLIESMSLVKKSEEEDTIEDLFPTSKIPNPEFQRFFQCLLHRVLHPQERLPPI 508
Query: 474 DDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKST------RRFLREKPSG--- 524
+ + + A+ + + F + E K K + E P+
Sbjct: 509 QQHILNMLNLPTEMKAKCEIPLSKVRTLFPLTEAVKKKDQVTAQDIFQDIHEEGPAAKKC 568
Query: 525 -SDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDM 583
+++ G S+S N V K+G + P++ F ++ ++ ++A +
Sbjct: 569 KTEKEEGHISISSVAEGN---------VTKVGSVNPVESFRVLVRQKIAS--FEQASLQL 617
Query: 584 KNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFF 643
+ I L ++NE + + K++E + A R+ I E ++FN LE + + + + F+
Sbjct: 618 ISHIEQFL-DTNETLYFMKSMECIKAFREEAIQFSEEQRFNSFLEALREKVEIKQLNHFW 676
Query: 644 DFLMSKKLSLISKSEAVDSDITDDEAGSFIVKSQPKHED 682
+ ++ ++LI+K E S +T +EA F+ ED
Sbjct: 677 EIVVQDGVTLITKDEGSGSSVTTEEATKFLAPKDKAKED 715
>gi|344239522|gb|EGV95625.1| ATP-dependent DNA helicase 2 subunit 2 [Cricetulus griseus]
Length = 732
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 171/759 (22%), Positives = 312/759 (41%), Gaps = 129/759 (16%)
Query: 4 TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
+ A++L +DV +M + P E K+ + +Q+++ E+ ++LFGT+ T
Sbjct: 6 NKAAVVLCMDVGVAMGNSFPGEESSFEQAKKVMTMFVQRQVFSESKDEIALVLFGTDNTN 65
Query: 57 NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDYM--------LIKK--YG 105
N L E Y+++ V + + + D L++ ++ Q G+ D + LI++ G
Sbjct: 66 NALASE-DQYQNITVHRHLMLPDFDLLEDIESKIQLGSRQADILDALIVCMDLIQRETIG 124
Query: 106 ETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV----------- 154
+ ++ KKH+ + TD P +DQ+ I + G+ ++ +
Sbjct: 125 KKFE-KKHIEVFTDLSSPFS-------QDQLDVIICNLKKSGISLQFFLPFPISKNDETG 176
Query: 155 ----------------------------------VRASLSGEPHMRVIIENDNLLNIFSK 180
V SL GE D L I+S
Sbjct: 177 DRGDGDLGLDHCGPSFPQKGITEQQKEGICMVERVMVSLEGE---------DGLDEIYSF 227
Query: 181 KSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKK 240
S + L V R + L + + IK+ YK +EK K
Sbjct: 228 SESLRQLCVFKKIERRSMP----------WSCQLTIGPDLSIKIVAYKSIVQEKV----K 273
Query: 241 YSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKF 300
S +++ + Y +D V E I+G+RYG ++P S + E +K+
Sbjct: 274 KSWIVVDARTLKKEDIRKETVYCLNDDDETEVSKEDTIQGFRYGSDIIPFSKVDEEQMKY 333
Query: 301 KPE-KSVKLLGFTDASNILRHYYMK-DVNLFIAEPGNSRATVAVSALARAMKEMNKVAIV 358
K E K +LGF +S + R ++M V A + A VA+S+L A+ E+N VAIV
Sbjct: 334 KSEGKCFSVLGFCRSSQVHRRFFMGYQVLKVFAAKDDEAAAVALSSLIHALDELNMVAIV 393
Query: 359 RCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNE 418
R + + + + VGV P + + + + LPF ED+R++ F S K P E
Sbjct: 394 RYAYDK-RANPQVGVAFPYIKDSY---ECLVYVQLPFMEDLRQYMFSSL-KNNKKCTPTE 448
Query: 419 QQQEAADNLVKMLDLAPSGKGEILQPEL-----TPNPALERFYHHLELKSEHQDAAPPPL 473
Q A D+L++ + L + E +L PNP +RF+ L + H PP+
Sbjct: 449 AQLSAIDDLIESMSLVKKSEEEDTIEDLFPTSKIPNPEFQRFFQCLLHRVLHPQERLPPI 508
Query: 474 DDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKST------RRFLREKPSG--- 524
+ + + A+ + + F + E K K + E P+
Sbjct: 509 QQHILNMLNLPTEMKAKCEIPLSKVRTLFPLTEAVKKKDQVTAQDIFQDIHEEGPAAKKC 568
Query: 525 -SDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDM 583
+++ G S+S N V K+G + P++ F ++ ++ ++A +
Sbjct: 569 KTEKEEGHISISSVAEGN---------VTKVGSVNPVESFRVLVRQKIAS--FEQASLQL 617
Query: 584 KNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFF 643
+ I L ++NE + + K++E + A R+ I E ++FN LE + + + + F+
Sbjct: 618 ISHIEQFL-DTNETLYFMKSMECIKAFREEAIQFSEEQRFNSFLEALREKVEIKQLNHFW 676
Query: 644 DFLMSKKLSLISKSEAVDSDITDDEAGSFIVKSQPKHED 682
+ ++ ++LI+K E S +T +EA F+ ED
Sbjct: 677 EIVVQDGVTLITKDEGSGSSVTTEEATKFLAPKDKAKED 715
>gi|348552630|ref|XP_003462130.1| PREDICTED: X-ray repair cross-complementing protein 5-like [Cavia
porcellus]
Length = 729
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 168/743 (22%), Positives = 327/743 (44%), Gaps = 89/743 (11%)
Query: 1 MAR--TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFG 51
MAR + A++L +DV +M + P E K+ + +Q+++ E+ ++LFG
Sbjct: 1 MARYGNKAAVVLCVDVGFAMSNSFPGEESPFEQAKKVMTMFVQRQVFAESKDEIALVLFG 60
Query: 52 TEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDYM--------LIK 102
T+ T N L Y+++ V + + + D L++ + Q G+ D++ +I+
Sbjct: 61 TDGTNNALAAG-DQYQNITVHRHLMLPDFDLLEDIDSRIQPGSQQADFLDALIVCMDVIQ 119
Query: 103 K--YGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVV----- 155
+ G+ ++ K+H+ + TD P +DQ+ I + G+ ++ +
Sbjct: 120 RETVGKKFE-KRHIEVFTDLSSPFS-------KDQLDIIIHNLKKSGISLQFFLPFPIGK 171
Query: 156 --RASLSGEPHMRVIIENDNLL--NIFSKKSSAKTLFVDSTTSLRGARKTRDI------- 204
G+ ++++ + L I ++ + SL G +I
Sbjct: 172 KDGTGDRGDGNLQMGDHGSSFLQKGITEQQREGIHMVRKMMLSLEGTNGLEEIYSFSESL 231
Query: 205 SPVTIFR----------GDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATH 254
+ +F+ L + + IK+ YK +EK D
Sbjct: 232 RQLCVFKKIERHSMPWPCQLTIGSNLSIKIVAYKSIVQEKVKKTWIVVD----ARTLKKE 287
Query: 255 EVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTD 313
+++ + Y +D V E I+G+RYG +VP S + E +K+K E K +LGF
Sbjct: 288 DIQKETVYCLNDDDETEVSKEDTIQGFRYGSDIVPFSKVDEEQMKYKSEGKCFSVLGFCR 347
Query: 314 ASNILRHYYMKD--VNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVV 371
+S + R ++M + + +F A + A VA+S+L A+ E++ VAIVR + + + + V
Sbjct: 348 SSQVQRKFFMGNQVLKVFPAR-DDEAAAVALSSLIHALDELDMVAIVRYAYDR-RANPQV 405
Query: 372 GVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKML 431
GV P + E + + LPF ED+R++ F S K + P E Q +A D + +
Sbjct: 406 GVAFPFIKEAY---ECLVYVQLPFMEDLRQYMFSSL-KNNKKYTPTEAQLDAVDAFIDSM 461
Query: 432 DLAPSGKGEILQPEL-----TPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPT 486
L + E +L PNP +R + L ++ H PP+ + + +P
Sbjct: 462 SLIEKDEEEDTIKDLFPTAKIPNPEFQRLFQCLLHRALHPQEPLPPIQQHILSMLDPPTE 521
Query: 487 LLAESQSAIDAFCGQFVIKENPKLKKST------RRFLREKPSGSDEPNGDGSVSDAQAV 540
+ A+ + + F + E K K + L E + + +G +A
Sbjct: 522 VTAKCEIPLSKIKTLFPLTEAIKRKDQVTAQEIFQDNLEEGLTIKKQKTEEG-----EAQ 576
Query: 541 NSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINY 600
S+ S +V K+G + P ++F A++ +++ ++A + N I L ++NE +
Sbjct: 577 FSVSSLAEGSVTKVGSVNPAENFRALVRQKNAS--FEEASHQLVNHIEQFL-DTNEIPYF 633
Query: 601 PKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKKLSLISKSEAV 660
K+++ + A R+ I E ++FN L+ + + + + F++ ++ ++LISK EA
Sbjct: 634 MKSLDCIKAFREEAIKFSEEQRFNSFLKALREKVEIKQLNHFWEIVVQDGITLISKDEAS 693
Query: 661 DSDITDDEA--GSFIVKSQPKHE 681
S +T +EA S +V + HE
Sbjct: 694 GSSVTSEEAKKCSALVPLRSSHE 716
>gi|432103389|gb|ELK30494.1| X-ray repair cross-complementing protein 5 [Myotis davidii]
Length = 763
Score = 138 bits (348), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 174/743 (23%), Positives = 312/743 (41%), Gaps = 106/743 (14%)
Query: 7 ALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETENEL 59
A++L +DV +M + P E K+ + +Q+++ E+ ++LFGT+ TEN L
Sbjct: 16 AVVLCMDVGFAMSNSFPGEESPFELAKKVMTMFVQRQVFAESKDEIALVLFGTDGTENAL 75
Query: 60 TKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDYM--LI--------KKYGETY 108
E Y+++ V + + + D +L++ ++ Q G+ D++ LI + G+ +
Sbjct: 76 ACE-DQYQNITVHRHLMLPDFNLLEDIESKIQPGSQQADFLDALIVCMDVIQQETVGKKF 134
Query: 109 KGKKHLCLITDALCPL----------------------------KDPDVGTKEDQVSTIA 140
+ K+H+ + TD P K+ G + D +
Sbjct: 135 E-KRHIEVFTDLSSPFSKDQLDTIIHNLKKSNISLQFFLPFPIGKEDGTGDRGDGNLPLD 193
Query: 141 RQMVAF-----------GLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFV 189
+F G+RM V+ SL GE D L I+S S + L V
Sbjct: 194 NHGPSFPLKGITEQQKEGIRMVKRVM-MSLEGE---------DGLDEIYSFSESLRQLCV 243
Query: 190 DSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTD 249
T R P + L + + IK+ YK +EK K S
Sbjct: 244 FKKTE-------RSSMP---WPCQLTIGSNLSIKILAYKSVLQEKV----KKSWIVVDAR 289
Query: 250 KFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKL 308
+V+ + Y +D VP E I+G+RYG ++P S + E +K+K E K +
Sbjct: 290 TLKKEDVQKETVYCLNDDDETEVPKEDTIQGFRYGSDIIPFSKVDEEQMKYKSEGKCFSV 349
Query: 309 LGFTDASNILRHYYMKDVNL-FIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQ 367
LGF +S + R Y+M + L A + A VA+S+L A+ E+ VAIVR + + +
Sbjct: 350 LGFCRSSQVHRKYFMGNQVLKVFAAKDDEAAAVALSSLIHALDELAMVAIVRYAYDR-RS 408
Query: 368 SVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNL 427
+ VGV P++ + + + LPF ED+R++ F S K + P E Q A D L
Sbjct: 409 NPQVGVAFPHIKDTY---ECLVYVQLPFMEDLRQYMFSSL-KNNKKYTPTEAQLNAVDAL 464
Query: 428 VKMLDLAPSG-KGEILQPEL----TPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITE 482
+ + L +G+ ++ PNP +R + L ++ H PP+ + + +
Sbjct: 465 IDSMSLVKKDEEGDTIEDLFPTTKIPNPQFQRLFQCLLHRALHPQEPLPPVQQHVLNMLD 524
Query: 483 PDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNS 542
P + A +S + F + E K K + + PN ++ +A S
Sbjct: 525 PPTEVTANCESPLSKIKTLFPLTEAIKKKDQLTAQDVFQDKHEEGPNSKKLKTEEEAQFS 584
Query: 543 MESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLE---NSNEGIN 599
+ S TV K+ P C + ++ +E ++ E
Sbjct: 585 LSSLAEGTVTKVSRTFP-------ACSPHCRKMGWGRLHQSSCQLISHIEQFLDTKETPY 637
Query: 600 YPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKKLSLISKSEA 659
+ K+++ + A R+ I E ++FN+ L+ + + + + F++ ++ ++LI+K EA
Sbjct: 638 FMKSMDCIKAFREEAIQFSEDQRFNNFLKDLREKVEIKQLNHFWEIIIQDGITLITKDEA 697
Query: 660 VDSDITDDEAGSFIV-KSQPKHE 681
S +T +EA F+ K P E
Sbjct: 698 SGSSVTAEEAEKFLAPKENPNEE 720
>gi|395527743|ref|XP_003765999.1| PREDICTED: X-ray repair cross-complementing protein 5 [Sarcophilus
harrisii]
Length = 817
Score = 138 bits (348), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 169/727 (23%), Positives = 325/727 (44%), Gaps = 81/727 (11%)
Query: 4 TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
T+ A++L LDVS +M P E K+ + +Q+++ EV ++LFGT+ T+
Sbjct: 91 TQAAVVLCLDVSFNMMHSFPGEESSFEQAKKVMTMFLQRQVFAEAKDEVALVLFGTDTTK 150
Query: 57 NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDYM--------LIKK--YG 105
N+L Y+++ V + + + D L++ L++ Q GT D++ +I+K G
Sbjct: 151 NDLATG-DQYQNITVHRHLMLPDFELLEDLQNSVQPGTRQADFLDALVVCMDVIQKETIG 209
Query: 106 ETYKGKKHLCLITDALCPL-KDP-DVGTKEDQVSTIARQMV----AFGLRMKNIVVRASL 159
+ ++ +KH+ + TD PL KD DV + S I+ Q G +S
Sbjct: 210 KKFE-RKHIEVFTDLSSPLSKDQLDVIVNNLKRSDISLQFFLPFPVDGEDGSEDTDDSSF 268
Query: 160 SGEPH----------------------MRVIIENDNLLN-IFSKKSSAKTLFVDSTTSLR 196
E H + +++E ++ LN I+S S + L V R
Sbjct: 269 DSERHKPSLPPKGLTEQQKEGVCVVKNIMMLLEGEDGLNEIYSFSESLRQLSVFKKIERR 328
Query: 197 GARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEV 256
P+ + L + + I++ YK +EK D ++
Sbjct: 329 ---------PMP-WPCQLTIGSNLSIRIVAYKSVTQEKVKKTWTVVD----ARTLRKEDL 374
Query: 257 KVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDAS 315
+ + Y +D V E I+G+RYG +VP S + E +K+K E K +LGF +S
Sbjct: 375 QKETVYCLNDDDETEVQKEDTIQGFRYGSDIVPFSKVDEEQMKYKTEGKCFSVLGFCRSS 434
Query: 316 NILRHYYMKDVNL-FIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL 374
+ R ++M + L A + A VA+S+L A+ +++ VAIVR + + + + VGV
Sbjct: 435 QVHRKFFMGNQVLKVFAAKDDEAAAVALSSLIHALDQLDMVAIVRYAYDR-RSNPQVGVA 493
Query: 375 TPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLA 434
P + + + + LP+ ED+R++ F S + P E Q A D L+ + L
Sbjct: 494 FPFIKQAY---ECLVYIQLPYMEDLRQYLFSSL-RINKKCIPTEAQLSAVDALIDSMSLV 549
Query: 435 -----PSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLA 489
++ Q PNP +R + L ++ H PP+ + + +P + A
Sbjct: 550 NRDDDEDTLEDLFQTSKIPNPQFQRLFQCLLHRALHPSDPLPPIQQHIWDMLDPPEEVTA 609
Query: 490 ESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVN-SMESKPV 548
+ Q+ + F + E K + + + D P + ++ VN S+ S
Sbjct: 610 KCQAPLSKIKTLFPLTEAMKKRDQVTAQDVFQDNHEDGPVFKKAKTEEGEVNFSISSLAE 669
Query: 549 VTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINY-PKAVELL 607
++ +G + P ++F ++ R++ ++ + + + + + I LE +G+ Y K+++ +
Sbjct: 670 GSITSVGSVNPAENFRVLVRRKNA-NFKEVSCQ-LIHHIDQFLET--KGLQYYMKSLDCI 725
Query: 608 VALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKKLSLISKSEAVDSDITDD 667
A R+ I E + FN+ L+ + + + F++ ++ ++LI+K E+ S +T +
Sbjct: 726 KAFREEAIQLSEEQNFNNFLQALRDKVEDKALNDFWNIVVQDGITLITKDESPGSSVTAE 785
Query: 668 EAGSFIV 674
EA F++
Sbjct: 786 EAKKFLI 792
>gi|431918002|gb|ELK17231.1| ATP-dependent DNA helicase 2 subunit 2 [Pteropus alecto]
Length = 780
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 167/758 (22%), Positives = 321/758 (42%), Gaps = 127/758 (16%)
Query: 7 ALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETENEL 59
A++L +DV +M++ P E K+ + +Q+++ E+ ++LFGT+ TEN L
Sbjct: 26 AVVLCMDVGFTMNNSFPGEESPFELTKKVITMFVQRQVFAESKDEIALVLFGTDGTENAL 85
Query: 60 TKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDYM--LI--------KKYGETY 108
+ Y+++ V + + + D L++ ++ Q G+ D++ LI + G+ +
Sbjct: 86 ACK-DQYQNITVHRHLMLPDFDLLEDIESKIQTGSQQADFLDALIVCMDVIQQETVGKKF 144
Query: 109 KGKKHLCLITDALCPLKDPDVGT---------------------KEDQVS-----TIARQ 142
K+H+ + TD P + T KED+ ++
Sbjct: 145 -NKRHIEVFTDLSSPFSKDQLDTIIHNLRNSSISLQFFLPFPIGKEDETGDRGDGSLRSD 203
Query: 143 MVAFGLRMKNIV------------VRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVD 190
+ +K I V SL GE D L I+S S + L +
Sbjct: 204 HLGPAFPLKGITEQQKEGIQMVKTVMMSLEGE---------DGLDEIYSFSESLRQLCI- 253
Query: 191 STTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDK 250
+ +T P L + + I + YK +EK K S
Sbjct: 254 ----FKKIERTSMPWPC-----QLTIGSNLSINIMAYKSILQEKV----KKSWMVVDART 300
Query: 251 FATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLL 309
+++ + Y +D VP E I+G+RYG ++P S + E +K+K K +L
Sbjct: 301 LRKEDIQKETVYCLNDDDETEVPKEDTIQGFRYGSDIIPFSKVDEEQMKYKSAGKCFSVL 360
Query: 310 GFTDASNILRHYYMKDVNL-FIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQS 368
GF +S + R YYM + L A + A VA+S+L A+ E+ VAIVR + + + +
Sbjct: 361 GFCRSSQVHRKYYMGNQVLKVFAAKDDEAAAVALSSLIHALDELGMVAIVRYAYDK-RAN 419
Query: 369 VVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV 428
VGV P + + + + LPF ED+R++ F S + P E Q A D L+
Sbjct: 420 PQVGVAFPYIKDTY---ECLVYVQLPFMEDLRQYMFSSLHN-NKKYTPTEAQLSAIDALI 475
Query: 429 KMLDLAPSGKGEILQPEL-----TPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEP 483
++L + E +L PNP +R + L ++ H PP+ + + +
Sbjct: 476 DSMNLIKKNEEEDTIEDLFPTTKIPNPQFQRLFQCLLHRALHPQEPLPPIQQHILNMLDT 535
Query: 484 DPTLLAESQSAI----------------DAFCGQFVIKENPKLKKSTRRFLREKPSGSDE 527
+ A+ Q + D Q + ++N + ++++F E+
Sbjct: 536 PTEVTAKCQIPLSKIKTLFPLTEVIKKKDQVTAQDIFQDNHEEGPTSKKFKTEE------ 589
Query: 528 PNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKI 587
G+ S + +S +K +V +G ++F ++ +++ E++ +++
Sbjct: 590 --GEAHFSISNLADSGVTKFIVCGCILG-WKFAENFRVLVRQKNA------TFEEVSHQL 640
Query: 588 FGLLE---NSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFD 644
+E ++NE + K ++ + A R+ I E ++FN+ L+ + + + + F++
Sbjct: 641 INHIEQFLDTNEIPYFMKTMDCIKAFREEAIQFSEEQRFNNFLKALREKVEIKQLNHFWE 700
Query: 645 FLMSKKLSLISKSEAVDSDITDDEAGSFIVKSQPKHED 682
++ ++LI+K EA S +TD+EA F+ + ED
Sbjct: 701 IVVQDGITLITKDEASGSSVTDEEAKKFLAPKENPSED 738
>gi|281340246|gb|EFB15830.1| hypothetical protein PANDA_001572 [Ailuropoda melanoleuca]
Length = 680
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 163/714 (22%), Positives = 308/714 (43%), Gaps = 101/714 (14%)
Query: 7 ALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETENEL 59
A++L +DV P+M + L E K+ + +Q+++ E+ ++LFGT+ TEN L
Sbjct: 2 AVVLCMDVGPAMSNSLAGEESPFELAKKVMTMFLQRQVFAESRDEIALVLFGTDGTENAL 61
Query: 60 TKEVGG---YEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDYM--------LIKK--YG 105
GG Y+++ V + + + D L++ ++ Q + D++ +I++ G
Sbjct: 62 ----GGKDQYQNITVHRHLMLPDFDLLEDIERKIQPSSQQADFLDALVVCMDMIQRETVG 117
Query: 106 ETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV---------VR 156
+ ++ KKH+ + TD P +DQ+ I + FG+ ++ +
Sbjct: 118 KKFE-KKHIEVFTDLSSPFS-------KDQLDVIIHNLKKFGISLQFFLPFPVGKEDGTG 169
Query: 157 ASLSGEPH---------MRVIIEN------------------DNLLNIFSKKSSAKTLFV 189
G H ++ I E D L I+S S + L V
Sbjct: 170 DRGDGNSHSDHHGPSFPLKGITEQQKEGIRMVKKVMLSLEGEDGLDEIYSFSESLRQLCV 229
Query: 190 DSTTSLRGARKTRDIS-PVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPST 248
+TR + P T L + + I + YK +E+ K S
Sbjct: 230 FKKI------ETRSVPWPCT-----LTIGSNLSINIVAYKSIVQERV----KKSWTVVDA 274
Query: 249 DKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVK 307
+++ + Y +D VP E I+G+RYG +VP S + E +K+K E K
Sbjct: 275 QTLKKEDLQKETIYCLNDDNETEVPKEDTIQGFRYGSDIVPFSKVDEEHMKYKSEGKCFS 334
Query: 308 LLGFTDASNILRHYYMKDVNL-FIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQ 366
+LGF +S + R Y+M + L A + A VA+S+L A+ E+ VA+VR V+ + +
Sbjct: 335 VLGFCRSSQVHRRYFMGNQVLKVFAAKDDEAAAVALSSLIHALDELAMVAVVRYVYDR-R 393
Query: 367 QSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADN 426
+ VG+ P + + + + LPF ED+R++ F S K + P E Q A D
Sbjct: 394 ANPQVGMAFPYIKDAY---ECLIYVQLPFMEDLRQYMFSSL-KNNKKYIPTEAQLSAVDA 449
Query: 427 LVKMLDLAPSGKGEILQPEL-----TPNPALERFYHHLELKSEHQDAAPPPLDDSLKKIT 481
L+ + L + E +L PNP +R + L ++ H PP+ + +
Sbjct: 450 LIDSMSLVKKDEKEDTIEDLFPTSKIPNPQFQRLFQCLLHRALHPQEPLPPIQQHILNML 509
Query: 482 EPDPTLLAESQSAIDAFCGQFVIKENPKLK-KSTRRFLREKPSGSDEPNGDGSVSDAQAV 540
+P + A+ Q + F + E K K + T + + + + + +A
Sbjct: 510 DPPTEVTAKCQIPLSKIKTAFPLTEAIKKKDQVTAQNIFQDNHEEGPTSKKLKTEEREAC 569
Query: 541 NSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINY 600
S+ S +V +G + P ++F ++ ++ ++A + N I L ++NE +
Sbjct: 570 FSISSLAEGSVTSVGSVNPAENFRVLVRQKKAT--FEEASRQLINCIEQFL-DTNETPYF 626
Query: 601 PKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKKLSLI 654
K+++ + RK I E ++FND L+ + + + + F++ ++ K+S +
Sbjct: 627 MKSMDCITVFRKEAIQFSEEQRFNDFLKALREKVEMKQLNHFWEIVVQGKVSFV 680
>gi|395823741|ref|XP_003785139.1| PREDICTED: X-ray repair cross-complementing protein 5 [Otolemur
garnettii]
Length = 755
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 166/742 (22%), Positives = 328/742 (44%), Gaps = 88/742 (11%)
Query: 1 MAR--TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFG 51
MAR ++ A++L +DV +M + P E K+ + IQ+++ E+ ++LFG
Sbjct: 1 MARPGSKAAVVLCMDVGFAMGNSYPGEESPFEQAKKVITMFIQRQVFAESKDEIALVLFG 60
Query: 52 TEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDYM--------LIK 102
T+ T+N L + Y+++ V + +++ D L++ ++ Q G+ D++ +I+
Sbjct: 61 TDGTKNALA-DGDQYQNITVHRHLRLPDFDLLEDIESKIQPGSQQADFLDALIVCMDVIQ 119
Query: 103 K--YGETYKGKKHLCLITDALCP------------LKDPDVGTK---------EDQVSTI 139
+ G+ ++ K+H+ + TD P LK D+ + ED +
Sbjct: 120 RETVGKKFE-KRHIEVFTDLSSPFSKDQLDIIMHNLKKSDISLQFFLPFPIGDEDGIGDR 178
Query: 140 ARQMVAFGLRM-----KNIVVRASLSGEPHMRVII---ENDNLLNIFSKKSSAKTLFVDS 191
+ R K I + + RV++ D L I+S S + L V
Sbjct: 179 GEGDLCLDHRGPSFPPKGITEQQKEGIQMVKRVMMFLDGKDGLDEIYSFSDSLRQLCVFK 238
Query: 192 TTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKF 251
S R P + L + + I++ YK E D
Sbjct: 239 KIS-------RSSMPWSCL---LTIGSNLSIRIVAYKSMLHENVKKTWTVVD----ARTL 284
Query: 252 ATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLG 310
+++ + Y +D V E I+G+RYG +VP S + E +K+K E K +LG
Sbjct: 285 KKEDIQKETVYCLNDDDETEVLKEDTIQGFRYGSDIVPFSKVDEEQMKYKSEGKCFSVLG 344
Query: 311 FTDASNILRHYYMKDVNL-FIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSV 369
F +S + R ++M + L A + A VA+S+L A+ E++ AIVR + + + +
Sbjct: 345 FCRSSQVQRKFFMGNQVLKVFAAKADEAAAVALSSLIHALDELDMAAIVRYTYDR-RANP 403
Query: 370 VVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVK 429
VGV P++ + + + LPF ED+R++ FPS K + P E+Q A D L+
Sbjct: 404 QVGVAFPHIKDAY---ECLVYVQLPFMEDLRQYMFPSL-KNNKKYTPTEEQLSAVDALID 459
Query: 430 MLDLAPSGKG-----EILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPD 484
+ L + ++ PNP +R++ L ++ H PP+ + + +P
Sbjct: 460 SMSLIKKDEERDTIEDLFPTSKIPNPQFQRYFQCLLHRALHPQEPLPPIQQHVLDMLDPP 519
Query: 485 PTLLAESQSAIDAFCGQFVIKENPKLK-KSTRRFLREKPSGSDEPNGDGSVSDAQAVNSM 543
+ A+ Q + F + E K K + T + + + D +A S+
Sbjct: 520 TEVTAKCQIPLSKIKTLFPLTEAIKRKAQVTAQDIFQDNHEDGTTTKKCKTEDGEAPMSI 579
Query: 544 ESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLE---NSNEGINY 600
+ +G + P ++F ++ +++ + E++ +++ L++ ++N+ +
Sbjct: 580 SRLAEGNITSVGSVNPAENFRVLVRQKNA------SFEEVSHQLINLIDQFLDTNDTPYF 633
Query: 601 PKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKKLSLISKSEAV 660
K+V+ + A R+ + E ++FN+ L+ + + + + F++ ++ ++LISK EA
Sbjct: 634 MKSVDCIKAFREEAVQFAEEQRFNNFLKALREKAEIKQLNHFWEIVVQDGITLISKDEAP 693
Query: 661 DSDITDDEAGSFIV-KSQPKHE 681
S +T +EA F+ K +P E
Sbjct: 694 GSSVTSEEAEKFLASKEKPNEE 715
>gi|427788949|gb|JAA59926.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 687
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 165/697 (23%), Positives = 297/697 (42%), Gaps = 101/697 (14%)
Query: 27 KLCSRL-IQKKLIYGKNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQS 85
K C+ L IQ+++ EV V++ G+E T N L+ + Y+++ VL ++ V +++
Sbjct: 16 KTCAELMIQRRIFSESKDEVAVVICGSERTNNSLSSD-DEYQNIDVLCGLQPVSFDMLEK 74
Query: 86 LKHLPQGTCAGDYMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMV- 144
L + + KH+C DA+ D V K + +R++V
Sbjct: 75 LAEV-------------------EATKHVCDFVDAIVVALDTIVD-KTKNLKFSSRRVVL 114
Query: 145 ------AFGLRMKNIVVRASLSGEPHMRVIIEND--NLLNIFSKKSSAKT---------- 186
F ++I+ + E + ++ D N+ + K S+++
Sbjct: 115 LSNLGGTFKDSQQSIIAEGMKNSELSLTIVCPFDVQNIGDDLGKLSASQQKAVKYVGRIL 174
Query: 187 --------LFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTL 238
F + +L K R + T + +LE+ + I + Y K E K
Sbjct: 175 EAVNGDSYTFSQAMPALMSYEKKR--TRPTPWNANLEIGPDISIPISSYIKVVEVKPKPW 232
Query: 239 KKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISS---AEW 295
K+ K P T V+ D Y ++ V + I YRYG +VP + A
Sbjct: 233 KQCVAKRP------TVPVRCDTVYYRNDEKESEVEKDGTIPAYRYGSTLVPFTDENRAAM 286
Query: 296 EAVKFKPEKSVKLLGFTDASNILRHYYMKD-VNLFIAEPGNSRATVAVSALARAMKEMNK 354
E K + +++LGFTD +NI RHYYM D + +A G+ A A+SAL +A+++
Sbjct: 287 EGSKAGSGRGLQVLGFTDEANIKRHYYMGDKTSYVVARKGDESAGAALSALIQALRKSKM 346
Query: 355 VAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSW 414
VAIVR + + + +G L+P + E+ + F LP+ ED+R F F P+
Sbjct: 347 VAIVRYSF-SDKSAPRMGFLSPRIKERY---ECLVFIQLPYMEDLRRFTF-----LPLDT 397
Query: 415 Q----PNEQQQEAADNLVKMLDLAP----SGKGEILQPELTPNPALERFYHHLELKSEH- 465
P + Q D+L+ +DL E+ + T NP L+R Y ++ ++ H
Sbjct: 398 NKDNIPTDTQLSLFDDLIAAMDLTAVDIDGEPEELFKSSQTSNPYLQRLYQCIQHRAMHP 457
Query: 466 QDAAPPP---LDDSLKKITEPDPTLLAE-SQSAIDAFCGQFVIKENPKLKKSTRRFL--- 518
+D PP + D++K P ++E ++ + F ++E +K +
Sbjct: 458 KDPLPPTPQYIADAIKT-----PKAVSELAEPVLKKIAAAFPLEEVSPVKAPQDNGVGPS 512
Query: 519 ---REKPSGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDW 575
++ S SDEP + +D SM K+ + P++DF+ ++S +D
Sbjct: 513 DQNKDHVSNSDEPASKRARTDV----SMAELVATATTKVDVVNPVEDFKKLVSGKD--HS 566
Query: 576 VDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICR 635
+ E ++ I L +++ + KAV+ L A R+ + + P FN L+K+ K
Sbjct: 567 YSEVCEQLEEVILKLFKDALGRAAHGKAVQCLRAYRESALEKSNPNMFNAFLKKL-KELY 625
Query: 636 KRNFSTFFDFLMSKKLSLISKSEAVDSDITDDEAGSF 672
+ ++ L + + I+K E S D E +F
Sbjct: 626 SGDQDDVWNLLAKEAVPPIAKKECDRSTWPDGEVENF 662
>gi|378729781|gb|EHY56240.1| ATP-dependent DNA helicase 2 subunit 2 [Exophiala dermatitidis
NIH/UT8656]
Length = 697
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 157/674 (23%), Positives = 295/674 (43%), Gaps = 69/674 (10%)
Query: 41 KNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGT----- 93
K ++GV+ GT+ET N++ + Y ++ VLQ I + +Q+L L P T
Sbjct: 48 KTLQIGVVGLGTDETSNDMMDQDDSYRNISVLQRISQILMPELQALPELLRPSHTDDRDV 107
Query: 94 -----CAGDYMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGL 148
AGD +I K+ + K KK + +IT+A + D D+G + ++V G+
Sbjct: 108 VSGIIIAGD--MIMKHCKNLKYKKRIVVITNANGYIDDDDIGNTAEHFKNHGIELVILGI 165
Query: 149 RMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVT 208
+ G+P + + N+ L + S + + + P
Sbjct: 166 DFDDPEYGFKEEGKPPQK--MHNEQTLQKLADLSGGIVGTMQEAIDELSRPHIKPVRPTP 223
Query: 209 IFRGDLELSE------KMKIKVWVYKKTGEEKFPTLKKYSDKA--PSTDKFATHEVKVDY 260
++G L+L + + I V Y KT ++ PT Y+ + PS + +T V Y
Sbjct: 224 TYKGLLKLGDPENYDTALCIDVERYFKTSIKRPPTASAYAVRPEDPSDENLST--VHNLY 281
Query: 261 EYKSVEDPS----KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASN 316
+YK ++ S + V E+ KG+ YG V IS +E K + +LGF N
Sbjct: 282 KYKVKDEESGGGTRDVDREELAKGFEYGRTAVAISESEQNITKLETYSGYDILGFIPVDN 341
Query: 317 ILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTP 376
+ R+ + + ++ +A+ GN +A +A+S+L A+ E+ VA+ R V + + ++ +L+P
Sbjct: 342 VERYMMLDNSSMIVAQKGNDKAAIALSSLVHALYEVRSVAVGRLVKKDMTEPIIT-LLSP 400
Query: 377 NVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK-FPVSWQPNEQQQE--AADNLVKMLDL 433
+ + N+LPFAEDVR ++FP + VS + + + AD L M D
Sbjct: 401 FAEQDF---ECLIENILPFAEDVRTYRFPPLHRVLTVSGKEITEHRNLPTADLLQGMSDF 457
Query: 434 APS-----GKGEILQPELTPNPALERFYHHLELKSEH-QDAAPPPLDDSLKKITEPDPTL 487
S E + + T +P L ++ ++ H +D P + L +P+ L
Sbjct: 458 VDSMSLVHKDDEEMSIDDTFSPVLHTIEGAIKHRAVHPKDPLPEKSEMFLSYSRQPE-HL 516
Query: 488 LAESQSAIDAFCGQFVIKENPKLKKSTRRFL-REKPSGSDEPNGDGSVSDAQAVNSMESK 546
A+S+ A+ +K+ P K R++ EKP ++ + +
Sbjct: 517 QAKSKHALAKLIAAADVKKVPPRTKGRRKYRDTEKP-----------------LSGLNVE 559
Query: 547 PVVTVDKIGDLTP---IQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKA 603
+ ++ ++P I +F+ M+ D A++ M + + + S +NY +
Sbjct: 560 DLFRKEERNQISPNNAIPEFKQMIEYSTDMDVAKDAVKQMGSIMEDWISKSFGDVNYDRV 619
Query: 604 VELLVALRKGCILEQEPKQFNDVL----EKVCKICRKRNFSTFFDFLMSKKLSLISKSEA 659
+E L +R+ + +EP +ND+L +K+ N + + + KL LI+ +
Sbjct: 620 LEGLSVVREEVVGLEEPGLYNDLLRGLKKKLVSGKLGGNRTDLWYRIRVSKLGLITDDVS 679
Query: 660 VDSDITDDEAGSFI 673
SD+ +A +F+
Sbjct: 680 PSSDVNRADADTFM 693
>gi|161789042|sp|Q7RX73.2|KU80_NEUCR RecName: Full=ATP-dependent DNA helicase II subunit 2; AltName:
Full=ATP-dependent DNA helicase II subunit Ku80;
AltName: Full=Protein mus-52
Length = 725
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 156/667 (23%), Positives = 292/667 (43%), Gaps = 74/667 (11%)
Query: 65 GYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDYM--------LIKKYGETYKGKKHL 114
GYE++ VLQ++ + +++LK P T + D + +I+ + + K K+ +
Sbjct: 74 GYENISVLQELGPMTMASLRALKSKIEPSSTSSADAISAIVVALRMIQTFTKKLKYKRKI 133
Query: 115 CLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNL 174
++T+ P+ D + ++ + +++ G+ + E R +N+ +
Sbjct: 134 IVVTNGESPIDDDQSEEVANMLNDVGIELIVLGVDFDD--AEYGFKEEDKPRHKEQNEKI 191
Query: 175 LNIFSK--KSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMK------IKVWV 226
L +S A + L R + + P + G L L + K I+V
Sbjct: 192 LKTLVDHCESGAFGTMAQAVEELATPR-IKSVRPFKAYDGPLTLGDPQKYPSALSIQVER 250
Query: 227 YKKTGEEKFPTLKKYSD--KAPSTDKF-----------ATHEVKVDYEYKSVEDPS---- 269
Y KT P+ ++ P T + VK Y+ +ED
Sbjct: 251 YFKTKRATPPSASNVANPNGPPQTQVWNEDDGVPFSGVGLQPVKQLRTYR-IEDSKAAGG 309
Query: 270 -KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNL 328
K V E K Y+YG VVP +E + +K++ KS ++GF S+ M + L
Sbjct: 310 KKDVDMEDLAKAYQYGRTVVPFGKSEEDYLKYETTKSFTIIGFVPMSSYEPFLNMGETGL 369
Query: 329 FIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSF 388
+A+ N A + +SAL A+ E+ A+ R V + ++ +L PN + + +I +
Sbjct: 370 IVAQKVNEEAELGLSALIHALHELESYAVARYVNKDKAPPQIL-LLKPNPAIEDDI-ECL 427
Query: 389 YFNVLPFAEDVREFQFPSFSKFPV---------SWQPNEQQQEAADNLVKMLDLAPSGKG 439
Y LPFAEDVR +QFP K PN Q+A + V +DL G+
Sbjct: 428 YDIPLPFAEDVRSYQFPPLDKVLTITGNVLTEHRLLPNNDLQQAMSDYVDAMDLTEYGQD 487
Query: 440 EILQP-ELTP-----NPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQS 493
+ P E P NP + + ++ + DA PP+ + L + T P LLA++++
Sbjct: 488 DDGHPAEYAPIDDLYNPVIHHMNQAIRNRAVNPDAPLPPVAEILTRFTHPPEPLLAKAKT 547
Query: 494 AIDAFCGQFVIKE-NPKLKKSTRRFLREKP-SGSDEPNGDGSVSDAQAVNSMESKPVVTV 551
ID +K+ PK++ R KP SG D D +S+ + + P+++
Sbjct: 548 EIDGLIQAAEVKKVPPKVQGKRGRKDTVKPLSGLDI---DALLSETRP--RTKKTPIIST 602
Query: 552 DKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALR 611
+ I +F+ ++ + + ++ A + M N I L+ +S + YP+A E L +R
Sbjct: 603 ENA-----IPEFKQILETAEDDETIEIAAKQMGNIICKLVSDSFADVLYPRAAENLRVMR 657
Query: 612 KGCILEQEPKQFNDVLEKVCKICRKRNFS-----TFFDFLMSKKLSLISKSEAVDSDITD 666
+ I + P +N + K+ + N + +F +++ +L LI++ E+ S++++
Sbjct: 658 EELINMEVPTLYNKYITKLKESLLSGNLNGDRREMWFRWIVGGRLGLITQDESEVSEVSE 717
Query: 667 DEAGSFI 673
+EA +F+
Sbjct: 718 NEAKAFL 724
>gi|301625724|ref|XP_002942054.1| PREDICTED: LOW QUALITY PROTEIN: x-ray repair cross-complementing
protein 5-like [Xenopus (Silurana) tropicalis]
Length = 712
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 166/705 (23%), Positives = 307/705 (43%), Gaps = 100/705 (14%)
Query: 1 MART-REALLLLLDVSPSM-------HSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGT 52
MAR + A++L +DV +M S +K+ +Q+++ E+ V+LFGT
Sbjct: 1 MARAAKSAVVLCMDVGLAMSHSNQGEESPFEQAKKVMMLFLQRQVFAESKDEIAVVLFGT 60
Query: 53 EETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDYM--------LIKK 103
+ T+N L + YE++ V + + + D L++ ++++ + G+ D++ L++K
Sbjct: 61 DTTDNALARG-DQYENISVHRHLMLPDFDLLEQIQNVVEPGSTQADFLDALIVSMDLLQK 119
Query: 104 --YGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV---VRAS 158
G+ Y+ + H+ + +D P DQ+ I + G+ ++ + V
Sbjct: 120 ETLGKKYE-RLHIAVFSDLSSPFS-------VDQLEVIIANLKKAGISLQFFLPFPVEEE 171
Query: 159 LSGEPHMRVIIENDNLLNIFSK---KSSAKTLFVDSTTSLRGARKTR-------DISPVT 208
+G+ ++N + S + K L + RK +S V
Sbjct: 172 EAGDS-------SNNRGDSGSSDRGRGPGKGLSDQQKEGIEMVRKIMFSLDGEDGLSEVF 224
Query: 209 IFRGDLE--------------------LSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPST 248
FR LE + + I++ YK EEK + D A S
Sbjct: 225 TFRESLERLSIFKKIERRPMAWPCQLTIGSGLSIRIVGYKSVTEEKVKKTWAHVD-AKSN 283
Query: 249 DKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVK 307
K ++K + Y D V E I+GYRYG +VP S + E +K++ E K
Sbjct: 284 KK---EDIKKETVYCLNNDEETEVEKEDTIQGYRYGSDIVPFSKVDQEQMKYRSEGKCFA 340
Query: 308 LLGFTDASNILRHYYMKDVNLFIAEPGNSR-ATVAVSALARAMKEMNKVAIVRCVWRQGQ 366
+LGFT +S + H ++ + + I P + A+VA+S+L A+ EM+ VAIVR V+ + +
Sbjct: 341 VLGFTKSSLVPSHQFVGNQVVKIFAPSDDEAASVALSSLIHALDEMDMVAIVRYVYDR-R 399
Query: 367 QSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADN 426
+ VGV P + +K + + LPF ED+R+ F S K + P + Q A D+
Sbjct: 400 CNPQVGVAFPRIKDKY---ECLVYIQLPFMEDLRQHLFSSL-KNSKKFTPTDSQLSAMDS 455
Query: 427 LVKMLDLAPSGKGE----ILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITE 482
L+ + L S GE + +P PNP +R + L+ K+ + +++ PP++ L+ + E
Sbjct: 456 LIGSMSLV-SDDGETTEDLFKPSKIPNPQFQRLFQCLQHKALNPESSLPPIEKHLQDMLE 514
Query: 483 PDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNS 542
+ ++++ F ++E K R++ DE V D AV
Sbjct: 515 APGAVTEGCRASLATMKACFPMQEATK---------RKEVKTGDEIFTKKXVPDFSAVXV 565
Query: 543 MESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPK 602
V ++G + P QDF A++ +++ E + +I L + + Y K
Sbjct: 566 SYGNLV----QVGSVNPDQDFRALLRQKNSD--FKHVSEQLIKRILECL-DVKQYQYYMK 618
Query: 603 AVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLM 647
++ + A R+ I + FN+ L+ + F+D ++
Sbjct: 619 SIRCIKAFREEAIKSSHVQNFNEFLQMLKLKAESSALMEFWDIIV 663
>gi|334347204|ref|XP_003341902.1| PREDICTED: LOW QUALITY PROTEIN: x-ray repair cross-complementing
protein 5-like [Monodelphis domestica]
Length = 835
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 170/731 (23%), Positives = 321/731 (43%), Gaps = 95/731 (12%)
Query: 7 ALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETENEL 59
A++L LDVS +M++ P E K+ + +Q+++ E+ ++LFGT+ N
Sbjct: 37 AVVLCLDVSFTMNNSFPGEESSFEQAKKVMTMFLQRQVFAESKDEIALVLFGTDLFANG- 95
Query: 60 TKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDYM--------LIKK--YGETY 108
+ Y+++ V + + V D L + +++ Q G+ D++ +I+K G+ +
Sbjct: 96 CXSLHQYQNINVHRPLMVPDLDLXKDIQNAIQPGSGHADFLDALIVCMDVIQKETIGKKF 155
Query: 109 KGKKHLCLITDALCP------------LKDPDVGTK--------------EDQVSTIARQ 142
+ +KH+ + TD P LK D+ + + S+ +
Sbjct: 156 E-RKHIEMFTDLNSPFSKDQMDIIISNLKRSDISLQFFLPFPIDKEDGDGDTDDSSFPSE 214
Query: 143 MVAFGLRMKNIV--VRASLSGEPHMRVIIENDNLLN-IFSKKSSAKTLFVDSTTSLRGAR 199
L K + + SLS +M + +E ++ LN I+S S + L V R
Sbjct: 215 RQKPSLPQKGLTKQQKESLSVVKNMMMSLEGEDGLNEIYSFSESLRQLCVFKKIERRPM- 273
Query: 200 KTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVD 259
P L + + IK+ YK +EK K S +V+ +
Sbjct: 274 ------PWPCL---LTIGSNLSIKIVAYKSVTQEKV----KKSWTVVDARTLRKEDVQKE 320
Query: 260 YEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNIL 318
Y +D V E I+G+RYG +VP S + E +K+K E K +LGF +S +
Sbjct: 321 TVYCLNDDDETEVQKEDTIQGFRYGSDIVPFSKVDEEQMKYKTEGKCFSVLGFCRSSQVH 380
Query: 319 RHYYMKDVNL-FIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPN 377
R ++M + L A + A VA+S+L A+ E++ VAIVR + + + + VGV P
Sbjct: 381 RKFFMGNQVLKVFAAKDDEAAAVALSSLIHALDELDMVAIVRYAYDR-RSNPQVGVAFPF 439
Query: 378 VSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSG 437
+ + + + LP+ ED+R++ F S P E Q A D L+ + L +
Sbjct: 440 IKQAY---ECLVYVQLPYMEDLRQYLFSSLRN-NKKCTPTEAQLSAVDALIDSMSLVNND 495
Query: 438 KGE-----ILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQ 492
+ E + Q PNP +R + L ++ + PP+ L + P + A+ Q
Sbjct: 496 EDEDTIEDMFQTSKIPNPQFQRLFQCLLHRALYPSDPLPPIQQHLWDMLNPPTEVTAKCQ 555
Query: 493 SAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEP--------NGDGSVSDAQAVNSME 544
+ + F + E K + + + DEP G+G+ S ++S+
Sbjct: 556 APLSKIKTLFPLTEAIKKRDQMTAQDIFQDNHEDEPIPKKAKTEEGEGNFS----ISSLA 611
Query: 545 SKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGIN-YPKA 603
+ +V G + P ++F ++ R++ ++ + + + + + I LE +G+ Y K+
Sbjct: 612 EGNITSV---GSVNPAENFRVLVRRKNA-NFKEVSCQ-LVHHIDQFLE--TKGLQYYMKS 664
Query: 604 VELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKKLSLISKSEAVDSD 663
++ + R+ I E + FN+ L+ + + + F++ ++ +SLI+K EA S
Sbjct: 665 LDCIRVFREEAIQLSEEQNFNNFLQTLRDKVEDKALNDFWEIIVQDGISLITKDEAPGSS 724
Query: 664 ITDDEAGSFIV 674
+T +EA F+
Sbjct: 725 VTAEEAKKFLA 735
>gi|296490345|tpg|DAA32458.1| TPA: ATP-dependent DNA helicase II [Bos taurus]
Length = 692
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 166/723 (22%), Positives = 309/723 (42%), Gaps = 95/723 (13%)
Query: 1 MART--REALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFG 51
MAR+ + A++L +DV +M + P E K+ + +Q+++ EV ++LFG
Sbjct: 1 MARSWDKAAVVLCMDVGLAMSNSFPGEESPFELAKKVMTMFVQRQVFAENKDEVALVLFG 60
Query: 52 TEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDYM--------LIK 102
T+ T+N L Y+++ V + + D L++ ++ Q G+ D + LI+
Sbjct: 61 TDGTKNALAAG-DQYQNITVHRHLMRPDFDLLEDIESKIQPGSQQADLLDALIVCMDLIQ 119
Query: 103 K--YGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV------ 154
+ G+ ++ K+H+ + TD P DQ+ I + G+ ++ +
Sbjct: 120 EETLGKKFE-KRHIEVFTDLSSPFS-------RDQLDIIIHNLKKSGISLQFFLPFPIGK 171
Query: 155 -------VRASLSGEPH-----------------------MRVIIENDNLLNIFSKKSSA 184
SL + H M + D L I+S +
Sbjct: 172 QGGTGDRGDGSLLSDHHGPSFPPKGITEQQKEGIQMVKKVMMSLEGEDGLEEIYSFSEAL 231
Query: 185 KTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDK 244
+ L V T R + L + + IK+ YK +EK D
Sbjct: 232 RQLCVFKKTERRSMP----------WSCQLTIGSNLSIKIVAYKSITQEKVKKCWTVVD- 280
Query: 245 APSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE- 303
A + K A + V Y +D V E I+G+RYG ++P S + E +K+K E
Sbjct: 281 ARTLKKEAIQKETV---YCLNDDDETEVSKEDTIQGFRYGSDIIPFSKVDEEQMKYKSEG 337
Query: 304 KSVKLLGFTDASNILRHYYMKDVNL-FIAEPGNSRATVAVSALARAMKEMNKVAIVRCVW 362
K +LGF +S + Y+M + L A + A VA+S+L A+ E++ VA+VR V+
Sbjct: 338 KCFSVLGFCRSSQVHMKYFMGNQVLKVFAAKDDEAAAVALSSLIHALDELDMVAVVRYVY 397
Query: 363 RQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQE 422
+ + + VGV P + + + + LPF ED+R++ FPS K P E Q
Sbjct: 398 NE-KTNPQVGVAFPLIKDAY---ECLVYIQLPFMEDLRQYMFPSL-KNNRKCTPTEAQLS 452
Query: 423 AADNLVKMLDLAPSGKGEILQPEL-----TPNPALERFYHHLELKSEHQDAAPPPLDDSL 477
A D L+ + L + E +L PNP +R + L ++ H PP+ +
Sbjct: 453 AVDALIDSMSLVQKDEEEGTIEDLFPTSKIPNPQFQRLFQCLLHRALHPQEPLPPIQQHI 512
Query: 478 KKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDG-SVSD 536
+ +P + A+ Q + F + E K K + + + P +
Sbjct: 513 LSMLDPPTEVTAKCQVPLSKIKTLFPLTEVIKKKNQVTGQDIFQDNHEEGPTCKKLKTEE 572
Query: 537 AQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNE 596
+A S+ S +V +G + P ++F ++ ++ ++A + N I L ++NE
Sbjct: 573 EEAHFSVSSLAEGSVTCVGSVNPAENFRVLVRQKKAT--FEEASHQLINHIEQFL-DTNE 629
Query: 597 GINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKKLSLISK 656
+ + K+++ + A R+ I E ++FN+ L+ + + + + F++ ++ ++LI+K
Sbjct: 630 TLYFMKSMDCIKAFREEAIQFSEEQRFNNFLKALREKVEVKQLNHFWEIVVHDGVTLITK 689
Query: 657 SEA 659
EA
Sbjct: 690 DEA 692
>gi|351712841|gb|EHB15760.1| ATP-dependent DNA helicase 2 subunit 2 [Heterocephalus glaber]
Length = 748
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 168/723 (23%), Positives = 317/723 (43%), Gaps = 77/723 (10%)
Query: 1 MART-REALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGT 52
MAR+ + A++L +DVS +M + P E K+ + +Q+++ E+ ++LFGT
Sbjct: 1 MARSGKAAVVLCMDVSFAMSNSFPGEESPFEQAKKVMTMFVQRQVFAESKDEIALVLFGT 60
Query: 53 EETENELTKEVGG-YEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDYMLIKKYGETYKG 110
+ T+N L VG Y+++ V + +K+ D L++ + Q G+ D +L G+ ++
Sbjct: 61 DSTDNALA--VGDQYQNITVHRHLKLPDFDLLEDIDSRIQLGSQQADCILFW-LGKKFE- 116
Query: 111 KKHLCLITDALCPL-KDP-DVGTKEDQVSTIARQM-VAFGLRMKNIVVRASLSGEPHMRV 167
K+H+ + TD P KD D+ + ++I+ Q + F + K+ G+ ++ +
Sbjct: 117 KRHIEVFTDLSSPFSKDQLDIIIHNVKKNSISLQFFLPFPIGKKD---GTGDRGDGNLHL 173
Query: 168 IIENDNLLN--IFSKKSSAKTLFVDSTTSLRGARKTRDISPVT-------IFRG------ 212
+ L + ++ + SL G +I + IF+
Sbjct: 174 SDHGPSFLQKGVTEQQKEGIQIVKKMMLSLEGVNGLDEIYSFSESLRQLCIFKKIERHSM 233
Query: 213 ----DLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDP 268
L + + IK+ YK +EK D +++ + Y +D
Sbjct: 234 PWPCQLTIGSNLSIKIVAYKSILQEKVKKTWIVVD----ARTLKKEDIQKETVYCLNDDD 289
Query: 269 SKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNILRHYYMKD-- 325
V E I+G+RYG ++P S + E +K+K E K +LGF +S + R +YM +
Sbjct: 290 ETEVSKEDTIQGFRYGSDIIPFSKVDEEQMKYKSEGKCFSVLGFCRSSQVQRKFYMGNQV 349
Query: 326 VNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIP 385
+ +F A + ATVA+S+L A+ E++ VAIVR + + + + VGV P + +
Sbjct: 350 LKVFPAH-DDEAATVALSSLIHALDELDMVAIVRYAYDR-RANPQVGVAFPFIKDAY--- 404
Query: 386 DSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPE 445
+ + LPF ED+R++ F S K + P E Q A D ++ + L + E +
Sbjct: 405 ECLVYVQLPFMEDLRQYMFSSL-KNNKKYTPTEAQLNAVDAFIESMSLIKKDEEEDTIKD 463
Query: 446 L-----TPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCG 500
L PNP +R + L ++ H PP+ + + +P + A+SQ +
Sbjct: 464 LFPTTKIPNPEFQRLFQCLLHRALHPQEPLPPIQQHILNMLDPPTEVTAKSQIPLSKIKT 523
Query: 501 QFVIKENPKLK-KSTRRFLREKPSGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTP 559
F + E K K + T + + + + +A S+ S +V K+ P
Sbjct: 524 LFPLTEAIKRKDQVTAQDIFQDNHEEGPTVKKHKTEEGEAHFSVSSLAEGSVTKVSRAFP 583
Query: 560 IQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQE 619
+ + + N I L ++NE + K+++ + A R I E
Sbjct: 584 VSSHQLI------------------NHIEQFL-DTNETPYFMKSLDCIKAFRDEAIKFSE 624
Query: 620 PKQFNDVLEKVCKICRKRNFSTFFDFLMSKKLSLISKSEAVDSDITDDEAGSFIVKSQPK 679
+ FN L+ + + + + F++ ++ ++LI+ EA S +T +EA F+ +
Sbjct: 625 EQCFNSFLKSLREKVEVKQLNHFWEIVVQDGITLITNDEASGSSVTAEEAKKFLAPKEKP 684
Query: 680 HED 682
ED
Sbjct: 685 DED 687
>gi|310791671|gb|EFQ27198.1| Ku70/Ku80 N-terminal alpha/beta domain-containing protein
[Glomerella graminicola M1.001]
Length = 732
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 157/651 (24%), Positives = 269/651 (41%), Gaps = 84/651 (12%)
Query: 41 KNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDY 98
K VGV+ T+ET N + + GYE++ VLQ++ + ++ LK P T GD
Sbjct: 49 KTWTVGVVGLKTDETRNAMQDD-EGYENISVLQELGPMTMTSLRELKEAIKPSETANGDA 107
Query: 99 M--------LIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRM 150
+ +I+ + + K K+ + L+TD L P+ DV +++ +++ G+
Sbjct: 108 VSAVVIAVDMIEAFTKKLKYKRRIYLVTDGLAPIDGDDVDAIAKKINQDGIELIVLGVDF 167
Query: 151 KNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIF 210
+ +P ++ E L+++ SK +A+ + + + + P +
Sbjct: 168 DDADYGFKEEDKPSIKKKNEG-ILMDLVSKCDNAQFATIAEAIDELDTPRLKPVRPYKTY 226
Query: 211 RGDLELS------------EKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTD----KFATH 254
G L L + I V Y KT + K PT A D T
Sbjct: 227 DGPLTLGLADPPPELKIPPTPVVINVERYFKTKQAKPPTASTVVVSAAGQDAASQSMQTA 286
Query: 255 E---------------VKVDYEYKSVEDPS-----KVVPPEQRIKGYRYGPQVVPISSAE 294
E VK YK + DP + V E KGY YG V IS +E
Sbjct: 287 EGDPMEGVESIAGFAAVKSARTYK-INDPDAPGGKRDVEFESLAKGYEYGRTAVAISESE 345
Query: 295 WEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNK 354
W K K KS ++GF M + + + + ++ +A+S+L A+ E+
Sbjct: 346 WNVTKLKTVKSFSIIGFIPCEKYEPFLNMGETCVTVGRKFDEKSQLALSSLIHALYELES 405
Query: 355 VAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK-FPVS 413
A+ R V + + V+V +L P + + + Y LPFAEDVR +QFP + VS
Sbjct: 406 YAVARLVVKDNKDPVLV-LLAPCIEPDM---ECLYDVPLPFAEDVRGYQFPPLDRVITVS 461
Query: 414 WQ---------PNEQQQEAADNLVKMLDLAPSGKGEILQP------ELTPNPALERFYHH 458
Q P ++ +A + V +DL+ + P E T NP + R
Sbjct: 462 GQNITADHRLLPGDELTDAMSDYVDSMDLSSFSADDEGNPSEYAAIEDTYNPIIHRINQA 521
Query: 459 LELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFL 518
+ ++ + + A P+ L + P L+ +++S I+ +K+ P K R++
Sbjct: 522 IRQRAVNPEGAIDPIPPILVRYAAPPADLVEKAKSQIETLISAAQVKKVPPKAKGKRKYE 581
Query: 519 REKP-SGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVD 577
KP SG D DA + + +P KI I +F+ ++ + D +
Sbjct: 582 GTKPLSGLD--------VDA-LLGTQPKRP-----KISAENAIPEFKRALAVAEEVDAIR 627
Query: 578 KAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLE 628
A M + + L+ +S NY +A E L LR G + +EP +NDV++
Sbjct: 628 DAARQMGDIVAQLITDSFGDANYARATENLSVLRGGLVDLEEPGIYNDVIK 678
>gi|403266933|ref|XP_003925612.1| PREDICTED: X-ray repair cross-complementing protein 5 [Saimiri
boliviensis boliviensis]
Length = 732
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 112/480 (23%), Positives = 220/480 (45%), Gaps = 27/480 (5%)
Query: 214 LELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVP 273
L + + I++ YK +E+ D +++ + Y +D +
Sbjct: 251 LTIGSNLSIRIAAYKSILQERVKKTWTVVD----AKTLKKEDIQKETVYCLNDDDETEIL 306
Query: 274 PEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNILRHYYMKDVNL-FIA 331
E I+G+RYG +VP S + E +K+K E K +LGF +S + R ++M + L A
Sbjct: 307 KEDIIQGFRYGSDIVPFSKVDEEQMKYKSEGKCFSVLGFCKSSQVQRRFFMGNQVLKVFA 366
Query: 332 EPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFN 391
+ A VA+S+L A+ +++ VAIVR + + + + VGV P++ + +
Sbjct: 367 ARDDEAAAVALSSLIHALNDLDMVAIVRYAYDK-RANPQVGVAFPHIKHNY---ECLVYV 422
Query: 392 VLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKG-----EILQPEL 446
LPF ED+R++ F S K + P E Q A D L+ + LA + ++
Sbjct: 423 QLPFMEDLRQYMFSSL-KNSKKYAPTEAQLNAVDALIDSMSLAKKDEKTNTLEDMFPTTK 481
Query: 447 TPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKE 506
PNP +R + L ++ H PP+ + + P + +SQ + F + E
Sbjct: 482 IPNPRFQRLFQCLLHRALHPREPLPPIQQHIWNMLNPPTEVTKKSQIPLSKIKTLFPLIE 541
Query: 507 NPKLKKSTRRFLREKPSGSDEPNGDG-SVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEA 565
K + T + + + + D P + A S+ S +V +G + P ++F
Sbjct: 542 AKKKDQVTAQDVFQD-NHEDGPTAKKLKTEEGGAHFSLSSLAEGSVTSVGSVNPAENFRV 600
Query: 566 MMSRRDCPDWVDKAIEDMKNKIFGLLE---NSNEGINYPKAVELLVALRKGCILEQEPKQ 622
++ ++ + E+ N++ +E ++NE + + K+++ + A R+ I E ++
Sbjct: 601 LVKQKKA------SFEEASNQLINHIEQFLDTNETLYFMKSMDCIRAFREEAIKFSEEQR 654
Query: 623 FNDVLEKVCKICRKRNFSTFFDFLMSKKLSLISKSEAVDSDITDDEAGSFIVKSQPKHED 682
FN+ L+ + + + + F++ ++ ++LI+K EA S +T +EA F+ + ED
Sbjct: 655 FNNFLKALREKVESKQLNHFWEIVVQDGITLITKEEASGSSVTAEEAKKFLAPKEKPSED 714
>gi|358368662|dbj|GAA85278.1| ATP-dependent DNA helicase II subunit 2 [Aspergillus kawachii IFO
4308]
Length = 712
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 166/686 (24%), Positives = 294/686 (42%), Gaps = 88/686 (12%)
Query: 45 VGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDYM--- 99
+GV+ T++T NEL + Y H+ VL IK ++SL P T GD +
Sbjct: 53 IGVLGLRTDDTANELEDD-PDYSHISVLSGIKQFLMPDIRSLSDRIKPSKTNKGDAISAL 111
Query: 100 -----LIKKYGETYKGKKHLCLITDALCPLKDPDVG-----TKEDQVSTIAR----QMVA 145
+I + K K+ + L+T+ P+ ++ KED + I
Sbjct: 112 VLAIQMIITQCKKLKYKRRIVLVTNGQGPMNPDNLSEITKKIKEDNIELIILGPDFDDPD 171
Query: 146 FGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDIS 205
+G++ ++ R + EN+ LL ++ ++ + + +
Sbjct: 172 YGVKEEDKDPRKA-----------ENEALLRSLAEDCDGAYGTLEQAVAELETPRVKSTR 220
Query: 206 PVTIFRGDLELSE------KMKIKVWVYKKTGEEKFPTLKKYSDK---------APSTDK 250
F+G L+L ++I V Y +T K P+ +++ + A S D
Sbjct: 221 ITASFKGHLQLGNPAEYDTAVRIPVERYYRTYVAKAPSASQFTVRNEEEMEAAGAGSQDG 280
Query: 251 FATHEVKVDYEYK----SVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSV 306
+ V+ Y+ + ED V +Q KGY YG +VPIS + + ++
Sbjct: 281 SSLVGVRNSRSYQIDDGTTEDGVTTVDRDQLAKGYEYGRTLVPISETDENITTLETFAAI 340
Query: 307 KLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQ 366
+LLGF + R+ +M N+ IA+ N +A +A+S+ A+ E+ A+ R V ++ +
Sbjct: 341 ELLGFIQSDRYDRYMHMSTTNIIIAQRANDKAALALSSFIHALFELESYAVARMVLKENK 400
Query: 367 QSVVVGVLTPNVSEKINIPD--SFYFNVLPFAEDVREFQFPSFSK-FPVSWQ-------- 415
V+V VL P++ PD LPFAEDVR ++FP + VS +
Sbjct: 401 PPVIV-VLAPSIE-----PDYECLLEAQLPFAEDVRTYRFPPLDRVVTVSGKVVTQHRNL 454
Query: 416 PNEQQQEAADNLVKMLDLAPSGKG----EILQPELTPNPALERFYHHLELKSEHQDAAPP 471
P++ A D VK ++L + + E L + + +P L R + ++ H + P
Sbjct: 455 PSDDLLNAMDKYVKSMELTDADENGDPTESLPIDDSFSPVLHRIDSAVRHRAIHPNDPIP 514
Query: 472 PLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGD 531
P L K + P L+ +S+ +D +K+ P K T+R S E
Sbjct: 515 PPAPVLTKFSHPPDDLVEKSKKYLDKLVAVSDVKKVPPKTKGTKR--------SRETEKP 566
Query: 532 GSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLL 591
S D A+ E + KI I +F+ +S+ + D + A++ M I +
Sbjct: 567 LSGLDVDALLHQEKRT-----KISPNNAIPEFKQTLSQAENIDTIKDAVKQMSTIIEDQI 621
Query: 592 ENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKR----NFSTFFDFLM 647
+S +NYP+ E LV +R+ I +EP +ND L+++ + K + + L
Sbjct: 622 RHSLGDVNYPRVAEGLVVMREELIDYEEPALYNDFLKQLKEKLLKEELGGDRRELWWLLR 681
Query: 648 SKKLSLISKSEAVDSDITDDEAGSFI 673
KL LI K E+ S++ ++EA +F+
Sbjct: 682 RSKLGLIDKGESDRSEVEEEEAKAFM 707
>gi|159032989|gb|ABW87766.1| ATP-dependent DNA helicase II [Cryphonectria parasitica]
Length = 729
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 163/693 (23%), Positives = 294/693 (42%), Gaps = 84/693 (12%)
Query: 45 VGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLK-HL-PQGTCAGDYM--- 99
VGV+ T+ TEN+ GYE++ V +++ V +Q LK H+ P T GD M
Sbjct: 53 VGVVGLRTDVTENQYVDN-EGYENICVFKELGPVSLQDMQQLKTHIKPSQTVNGDAMSAV 111
Query: 100 -----LIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV 154
+I + + K + + L+TD + + D + ++++ I G+ +
Sbjct: 112 VVASEMIVAFTKQNKWDRKVYLVTDGMGAIDDDGIDDIANRLNDIGIAFTIIGVDFDD-- 169
Query: 155 VRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGAR--KTRDISPVTIFRG 212
E + N+ L F K + +F ++ G K R V + G
Sbjct: 170 PEYGFKEEDKSSLKASNERTLKAFVDKCD-RGVFATMAEAIEGLAIPKPRFTKLVRSYDG 228
Query: 213 DLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPST--------DKFAT----HE----- 255
L L + + KT +++P KK S ++ +T D +T HE
Sbjct: 229 PLTLGDPENFPSAI--KTYVDRWPVTKKSSAESATTVVLKSGSLDTQSTMTLDHEMEGFE 286
Query: 256 --------VKVDYEYKSVEDPS-----KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKP 302
VK YK V DP + V E KGY YG + ++ AEW+ K
Sbjct: 287 NGGPSLSSVKQHRTYK-VNDPGAPGGKRDVEFETLAKGYTYGSTAIHVAEAEWDITKLDT 345
Query: 303 EKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVW 362
K ++GF + M + ++ +A+P + + VA+SAL A+ E+ A+ R V
Sbjct: 346 TKGFSIIGFIANEKVEPFVAMAETSVTVAKPFDETSQVALSALIHALHELEHCAVARLVV 405
Query: 363 RQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPV---------S 413
+ G+ V++ +L P V I + Y LPFAED R+++FP K
Sbjct: 406 KDGKDPVIL-LLKPCVDVDI---ECLYDVPLPFAEDTRQYRFPPLDKVITITGKTLTEHR 461
Query: 414 WQPNEQQQEAADNLVKMLDLAPSGKGEILQ-PELTP-----NPALERFYHHLELKSEHQD 467
+ P++ + A + V +D++ G+ + E P +P + R + ++ +
Sbjct: 462 FLPDKNLKRAMSDFVDAMDISEFGRDDDGNSAEYAPLDDLYSPIIHRVNQAIRARAVDEQ 521
Query: 468 AAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDE 527
A P+ L K + P LL + I+A +K+ P+ K R+ SG +
Sbjct: 522 GAVEPIPPVLLKYSRPPEKLLKRANPEIEALIEAADVKKAPEKLKGKRK----GESGQET 577
Query: 528 PNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAM---MSRRDCPDWVDKAIEDMK 584
G + A + + E K V KI I DF+ + ++ + + ++ A++DM
Sbjct: 578 RAISGFDAGASILAAREKKKV----KISKENAIPDFKQLLRSLATVNTDEAIETAMKDMA 633
Query: 585 NKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFS---- 640
+F L++ S NY +A+E + +R+ + + PK +N LE++ +
Sbjct: 634 QIVFSLIKESFGDRNYDQALENIGVMREQMVGLESPKLYNSFLEELKSKVNSKALGGDRR 693
Query: 641 -TFFDFLMSKKLSLISKSEAVDSDITDDEAGSF 672
+ S +L LI++ ++ SD+T ++A +F
Sbjct: 694 DMWAKIRWSGRLGLITRDQSETSDVTKEDAFNF 726
>gi|336469609|gb|EGO57771.1| protein Ku80 [Neurospora tetrasperma FGSC 2508]
Length = 725
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 153/667 (22%), Positives = 289/667 (43%), Gaps = 74/667 (11%)
Query: 65 GYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDYM--------LIKKYGETYKGKKHL 114
GYE++ VL+++ + ++ LK P T + D + +I+ + + K K+ +
Sbjct: 74 GYENISVLKELGPMTMTSLRVLKSKIEPSSTSSADAISAIVVALRMIQTFTKKLKYKRKI 133
Query: 115 CLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNL 174
++T+ P+ D + ++ + +++ G+ + E R +N+ +
Sbjct: 134 IVVTNGESPIDDDQSEEVANMLNDVGIELIVLGVDFDD--AEYGFKEEDKPRHKEQNEKI 191
Query: 175 LNIFSK--KSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMK------IKVWV 226
L +S A + L R + + P + G L L + K I+V
Sbjct: 192 LKTLVDHCESGAFGTMAQAVEELATPR-IKSVRPFKAYDGPLTLGDPQKYPSALSIQVER 250
Query: 227 YKKTGEEKFPTLKKYSD--KAPSTDKF-----------ATHEVKVDYEYKSVEDPS---- 269
Y KT P+ ++ P T + VK Y+ +ED
Sbjct: 251 YFKTKRATPPSASNVANPNGPPQTQVWDEDHGVPFSGVGFQPVKQLRTYR-IEDSKAAGG 309
Query: 270 -KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNL 328
K V E K Y+YG VVP +E + +K++ KS ++GF S+ M + L
Sbjct: 310 KKDVDMEDLAKAYQYGRTVVPFGKSEEDYLKYETTKSFTIIGFVPMSSYEPFLNMGETGL 369
Query: 329 FIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSF 388
+A+ N A + +SAL A+ E+ A+ R V + ++ +L PN + + +I +
Sbjct: 370 IVAQKVNEEAELGLSALIHALHELESYAVARYVNKDKAPPQIL-LLKPNPAIEDDI-ECL 427
Query: 389 YFNVLPFAEDVREFQFPSFSKFPV---------SWQPNEQQQEAADNLVKMLDLAPSGKG 439
Y LPFAEDVR +QFP K PN Q+A + V +DL G+
Sbjct: 428 YDIPLPFAEDVRSYQFPPLDKVLTITGNVLTEHRLLPNNDLQQAMSDYVDAMDLTEYGQD 487
Query: 440 EILQP-ELTP-----NPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQS 493
+ P E P NP + + ++ + DA PP+ + L + T P L+A++++
Sbjct: 488 DDGHPAEYAPVDDLYNPVIHHMNQAIRNRAVNPDAPLPPVAEILTRFTHPPEPLIAKAKT 547
Query: 494 AIDAFCGQFVIKE-NPKLKKSTRRFLREKP-SGSDEPNGDGSVSDAQAVNSMESKPVVTV 551
ID +K+ PK++ R KP SG D D + + + + P+++
Sbjct: 548 EIDGLIKAAEVKKVPPKVQGKRGRKDTVKPLSGLDI---DALLGETRP--RTKKTPIIST 602
Query: 552 DKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALR 611
+ I +F+ ++ + + ++ A + M N I L+ +S + YP+A E L +R
Sbjct: 603 ENA-----IPEFKQILETAEDDETIETAAKQMGNIICKLVSDSFADVLYPRAAENLRVMR 657
Query: 612 KGCILEQEPKQFNDVLEKVCKICRKRNFS-----TFFDFLMSKKLSLISKSEAVDSDITD 666
+ I + P +N + K+ + N + +F +++ +L LI++ E+ S++++
Sbjct: 658 EELINMEVPTLYNKYITKLKESLLSGNLNGDRREMWFRWIVGGRLGLITQDESEVSEVSE 717
Query: 667 DEAGSFI 673
EA +F+
Sbjct: 718 KEAKAFL 724
>gi|402889331|ref|XP_003919748.1| PREDICTED: LOW QUALITY PROTEIN: X-ray repair cross-complementing
protein 5 [Papio anubis]
Length = 618
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 111/472 (23%), Positives = 217/472 (45%), Gaps = 27/472 (5%)
Query: 214 LELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVP 273
L + + I++ YK +E+ D +++ + Y +D V
Sbjct: 137 LTIGSNLSIRIAAYKSILQERVKKTWTVVD----AKTLKKEDIQKETVYCLNDDDETEVL 192
Query: 274 PEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNILRHYYMKDVNL-FIA 331
E I+G+RYG +VP S + E +K+K E K +LGF +S + R ++M + L A
Sbjct: 193 KEDIIQGFRYGSDIVPFSKVDEEQMKYKSEGKCFSVLGFCKSSQVQRRFFMGNQVLKVFA 252
Query: 332 EPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFN 391
+ A VA+S+L A+ +++ VAIVR + + + + VGV P++ + +
Sbjct: 253 ARDDEAAAVALSSLIHALDDLDMVAIVRYAYDK-RANPQVGVAFPHIKHNY---ECLVYV 308
Query: 392 VLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKG-----EILQPEL 446
LPF ED+R++ F S K + P E Q A D L+ + LA + ++
Sbjct: 309 QLPFMEDLRQYMFSSL-KNSKKYAPTEAQLNAVDALIDSMSLAKKDEKTDTLEDLFPTTK 367
Query: 447 TPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKE 506
PNP +R + L ++ H PP+ + + P + +SQ + F + E
Sbjct: 368 IPNPRFQRLFQCLLHRALHPREPLPPIQQHIWNMLNPPAEVTTKSQIPLSKIKTLFPLIE 427
Query: 507 NPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVN-SMESKPVVTVDKIGDLTPIQDFEA 565
K + T + + + + D P ++ + S+ S +V +G + P ++F
Sbjct: 428 AKKKDQVTAQDIFQD-NHEDGPTAKKLKTEQGGAHFSVSSLAEGSVTSVGSVNPAENFRV 486
Query: 566 MMSRRDCPDWVDKAIEDMKNKIFGLLE---NSNEGINYPKAVELLVALRKGCILEQEPKQ 622
++ ++ + E+ N++ +E ++NE + K+++ + A R+ I E ++
Sbjct: 487 LVKQKKA------SFEEASNQLINHIEQFLDTNETPYFMKSMDCIRAFREEAIKFSEEQR 540
Query: 623 FNDVLEKVCKICRKRNFSTFFDFLMSKKLSLISKSEAVDSDITDDEAGSFIV 674
FN+ L+ + + + + F++ ++ ++LI+K EA S +T DEA F+
Sbjct: 541 FNNFLKALREKVEIKQLNHFWEIVVQDGITLITKEEASGSSVTADEAKKFLA 592
>gi|389632287|ref|XP_003713796.1| hypothetical protein MGG_10157 [Magnaporthe oryzae 70-15]
gi|351646129|gb|EHA53989.1| hypothetical protein MGG_10157 [Magnaporthe oryzae 70-15]
Length = 726
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 174/727 (23%), Positives = 302/727 (41%), Gaps = 91/727 (12%)
Query: 13 DVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELTKEVG--GYEHVK 70
D+ SM V +KLC+ + K +VGV+ T+ T+N L + G GY ++
Sbjct: 28 DLDWSMRYVW---DKLCTTTAASR----KTWQVGVVGVRTDVTDNPL-DDAGEKGYNNIS 79
Query: 71 VLQDIKVVDGHLVQSL--KHLPQGTCAGDY---------MLIKKYGETYKGKKHLCLITD 119
VLQ++ + ++ L K +P T GD M+ + + K K+ + L+TD
Sbjct: 80 VLQNVAPMTLSALKLLQDKLVPSSTSDGDVVSAIVVAIAMIDEAAPQRLKYKRKIVLVTD 139
Query: 120 ALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFS 179
+ DVG +++ + ++ G+ + E ++ N+ LL S
Sbjct: 140 GQGAIDGDDVGDIARRINELNIEITIIGVDFDD--PEYPFKEEDKSQLKARNEKLLKSIS 197
Query: 180 K--KSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSE-------KMKIKVWVYKKT 230
K S +++ L R + P F G L L + + I V Y KT
Sbjct: 198 TECKESVYGTMIEAVDELDTPR-IKSTKPYKSFDGQLTLGDPETYKESALSIHVERYFKT 256
Query: 231 GEEKFPT-----LKKYSDKAPSTDKFAT--------HEVKVDYEYKSVEDPS-----KVV 272
+ + T +K +D S F ++K YK V DP + V
Sbjct: 257 KQARPITASNVMVKSETDATQSGQDFEGGDGAGGQFADLKTARNYK-VLDPDAPGGKRDV 315
Query: 273 PPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAE 332
P ++ +GY YG VP+ +E+ K + +KS ++GF R M + ++ A
Sbjct: 316 PQDELARGYLYGRTAVPMPESEFNITKLETKKSFTIIGFIAWEKYERFLNMGESSVIFAS 375
Query: 333 PGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNV 392
N + +A SAL A+ E + R V + G++ ++ +L P++ I + Y
Sbjct: 376 KFNEKDELAFSALVNALYETESYGVARLVAKDGKEPQLL-LLMPHIDTDI---ECLYDVP 431
Query: 393 LPFAEDVREFQFPSFSKFPV---------SWQPNEQQQEAADNLVKMLDLAPSGKGEILQ 443
LPFAED+R +QFP K P+++ +EA + V +D++ +G +
Sbjct: 432 LPFAEDIRYYQFPPLDKVVTLGGQTLTKHRLLPSDELEEAMSDYVDAMDISAAGGDDEEA 491
Query: 444 PELTP-----NPALERFYHHLELKSEHQDAAPPPLD-DSLKKITEPDPTLLAESQSAIDA 497
E P +P + R + + H D P LD + L + + P + + ++ I+
Sbjct: 492 QEYAPIEDTYSPIIHRVNQAIRFRVVHPD-KPLGLDSEVLTRYSVPPRKVTSHAKDQIER 550
Query: 498 FCGQFVIKENPKLKKSTRRFLREKP-SGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGD 556
+K+ P K R+ KP SG D DA NS KI
Sbjct: 551 LIKVAEVKKVPPKAKGKRQREVVKPISGLD--------VDALLNNSSNGSSKAKRAKISA 602
Query: 557 LTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCIL 616
+ +F+ M++ D + ++ A + M + + S +NY +A E + +R +
Sbjct: 603 ENSVPEFKQMLASADKVETIENATKQMGEVVTSFINTSMGDMNYDRAAENMRVMRDELVA 662
Query: 617 EQEPKQFNDVLEKV-CKICR------KRNFSTFFDFLMSKKLSLISKSEAVDSDITDDEA 669
+EP +ND L+ + KI +R F +KL LI+K E+ S +T++EA
Sbjct: 663 LEEPVFYNDFLKSLKTKIVSGELNGDRREMWWRIKF---EKLGLITKKESEVSSVTEEEA 719
Query: 670 GSFIVKS 676
F S
Sbjct: 720 VQFFKTS 726
>gi|390464792|ref|XP_002749807.2| PREDICTED: X-ray repair cross-complementing protein 5 [Callithrix
jacchus]
Length = 779
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 111/480 (23%), Positives = 219/480 (45%), Gaps = 27/480 (5%)
Query: 214 LELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVP 273
L + + I++ YK +E+ D +++ + Y +D +
Sbjct: 298 LTIGSNLSIRIAAYKSILQERVKKTWTVVD----AKTLKKEDIQKETVYCLNDDDETEIL 353
Query: 274 PEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNILRHYYMKDVNL-FIA 331
E I+G+RYG +VP S + E +K+K E K +LGF +S + R ++M + L A
Sbjct: 354 KEDIIQGFRYGSDIVPFSKVDEEQMKYKSEGKCFSVLGFCKSSQVQRRFFMGNQVLKVFA 413
Query: 332 EPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFN 391
+ A VA+S+L A+ +++ VAIVR + + + + VGV P++ + +
Sbjct: 414 ARDDEAAAVALSSLIHALNDLDMVAIVRYAYDK-RANPQVGVAFPHIKHNY---ECLVYV 469
Query: 392 VLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKG-----EILQPEL 446
LPF ED+R++ F S K + P E Q A D L+ + LA + ++
Sbjct: 470 QLPFMEDLRQYMFSSL-KNSKKYAPTEAQLNAVDALIDSMSLAKKDEKTNTLEDMFPTTK 528
Query: 447 TPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKE 506
PNP +R + L ++ H PP+ + + P + +SQ + F + E
Sbjct: 529 IPNPRFQRLFQCLLHRALHPREPLPPIQQHIWNMLNPPTEVTKKSQIPLSKIKTLFPLIE 588
Query: 507 NPKLKKSTRRFLREKPSGSDEPNGDG-SVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEA 565
K + + + + + D P + A S+ S +V +G + P ++F
Sbjct: 589 AKKKDQVIAQDVFQD-NHEDGPTAKKLKTEEGGAHFSISSLAEGSVTSVGSVNPAENFRV 647
Query: 566 MMSRRDCPDWVDKAIEDMKNKIFGLLE---NSNEGINYPKAVELLVALRKGCILEQEPKQ 622
++ ++ + E+ N++ +E ++NE + + K+++ + A R+ I E ++
Sbjct: 648 LVKQKKA------SFEEASNQLINHIEQFLDTNETLYFMKSMDCIRAFREEAIKFSEEQR 701
Query: 623 FNDVLEKVCKICRKRNFSTFFDFLMSKKLSLISKSEAVDSDITDDEAGSFIVKSQPKHED 682
FN+ L+ + + + + F++ ++ ++LI+K EA S +T +EA F+ + ED
Sbjct: 702 FNNFLKALREKVESKQLNHFWEIVVQDGITLITKEEASGSSVTAEEAKKFLAPKEKPSED 761
>gi|332815405|ref|XP_001151873.2| PREDICTED: X-ray repair cross-complementing protein 5 isoform 7
[Pan troglodytes]
Length = 827
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 110/472 (23%), Positives = 217/472 (45%), Gaps = 27/472 (5%)
Query: 214 LELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVP 273
L + + I++ YK +E+ D +++ + Y +D V
Sbjct: 346 LTIGSNLSIRIAAYKSILQERVKKTWTVVD----AKTLKKEDIQKETVYCLNDDDETEVL 401
Query: 274 PEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNILRHYYMKDVNL-FIA 331
E I+G+RYG +VP S + E +K+K E K +LGF +S + R ++M + L A
Sbjct: 402 KEDIIQGFRYGSDIVPFSKVDEEQMKYKSEGKCFSVLGFCKSSQVQRRFFMGNQVLKVFA 461
Query: 332 EPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFN 391
+ A VA+S+L A+ +++ VAIVR + + + + VGV P++ + +
Sbjct: 462 ARDDEAAAVALSSLIHALDDLDMVAIVRYAYDK-RANPQVGVAFPHIKHNY---ECLVYV 517
Query: 392 VLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKG-----EILQPEL 446
LPF ED+R++ F S K + P E Q A D L+ + LA + ++
Sbjct: 518 QLPFMEDLRQYMFSSL-KNSKKYAPTEAQLNAVDALIDSMSLAKKDEKTDTLEDLFPTTK 576
Query: 447 TPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKE 506
PNP +R + L ++ H PP+ + + P + +SQ + F + E
Sbjct: 577 IPNPRFQRLFQCLLHRALHPREPLPPIQQHIWNMLNPPAEVTTKSQIPLSKIKTLFPLIE 636
Query: 507 NPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVN-SMESKPVVTVDKIGDLTPIQDFEA 565
K + T + + + + D P ++ + S+ S +V +G + P ++F
Sbjct: 637 AKKKDQVTAQEIFQD-NHEDGPTAKKLKTEQGGAHFSVSSLAEGSVTSVGSVNPAENFRV 695
Query: 566 MMSRRDCPDWVDKAIEDMKNKIFGLLE---NSNEGINYPKAVELLVALRKGCILEQEPKQ 622
++ ++ + E+ N++ +E ++NE + K+++ + A R+ I E ++
Sbjct: 696 LVKQKKA------SFEEASNQLINHIEQFLDTNETPYFMKSIDCIRAFREEAIKFSEEQR 749
Query: 623 FNDVLEKVCKICRKRNFSTFFDFLMSKKLSLISKSEAVDSDITDDEAGSFIV 674
FN+ L+ + + + + F++ ++ ++LI+K EA S +T +EA F+
Sbjct: 750 FNNFLKALREKVEIKQLNHFWEIVVQDGITLITKEEASGSSVTAEEAKKFLA 801
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 59/106 (55%), Gaps = 13/106 (12%)
Query: 4 TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
+ A++L +DV +M + +P +E K+ + +Q+++ E+ ++LFGT+ T+
Sbjct: 101 NKAAVVLCMDVGFTMSNSIPGIESPFEQAKKVITMFVQRQVFAENKDEIALVLFGTDGTD 160
Query: 57 NELTKEVGG--YEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDYM 99
N L+ GG Y+++ V + + + D L++ ++ Q G+ D++
Sbjct: 161 NPLS---GGDQYQNITVHRHLMLPDFDLLEDIESKIQPGSQQADFL 203
>gi|158254916|dbj|BAF83429.1| unnamed protein product [Homo sapiens]
Length = 732
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 110/471 (23%), Positives = 217/471 (46%), Gaps = 27/471 (5%)
Query: 214 LELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVP 273
L + + I++ YK +E+ D +++ + Y +D V
Sbjct: 251 LTIGSNLSIRIAAYKSILQERVKKTWTVVD----AKTLKKEDIQKETVYCLNDDDETEVL 306
Query: 274 PEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNILRHYYMKDVNL-FIA 331
E I+G+RYG +VP S + E +K+K E K +LGF +S + R ++M + L A
Sbjct: 307 KEDIIQGFRYGSDIVPFSKVDEEQMKYKSEGKCFSVLGFCKSSQVQRRFFMGNQVLKVFA 366
Query: 332 EPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFN 391
+ A VA+S+L A+ +++ VAIVR + + + + VGV P++ + +
Sbjct: 367 ARDDEAAAVALSSLIHALDDLDMVAIVRYAYDK-RANPQVGVAFPHIKHNY---ECLVYV 422
Query: 392 VLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKG-----EILQPEL 446
LPF ED+R++ F S K + P E Q A D L+ + LA + ++
Sbjct: 423 QLPFMEDLRQYMFSSL-KNSKKYAPTEAQLNAVDALIDSMSLAKKDEKTDTLEDLFPTTK 481
Query: 447 TPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKE 506
PNP +R + L ++ H PP+ + + P + +SQ + F + E
Sbjct: 482 IPNPRFQRLFQCLLHRALHPREPLPPIQQHIWNMLNPPAEVTTKSQIPLSKIKTLFPLTE 541
Query: 507 NPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVN-SMESKPVVTVDKIGDLTPIQDFEA 565
K + T + + + + D P ++ + S+ S +V +G + P ++F
Sbjct: 542 AKKKDQVTAQEIFQD-NHEDGPTAKKLKTEQGGAHFSVSSLAEGSVTSVGSVNPAENFRV 600
Query: 566 MMSRRDCPDWVDKAIEDMKNKIFGLLE---NSNEGINYPKAVELLVALRKGCILEQEPKQ 622
++ ++ + E+ N++ +E ++NE + K+++ + A R+ I E ++
Sbjct: 601 LVKQKKA------SFEEASNQLINHIEQFLDTNETPYFMKSIDCIRAFREEAIKFSEEQR 654
Query: 623 FNDVLEKVCKICRKRNFSTFFDFLMSKKLSLISKSEAVDSDITDDEAGSFI 673
FN+ L+ + + + + F++ ++ ++LI+K EA S +T +EA F+
Sbjct: 655 FNNFLKALQEKVEIKQLNHFWEIVVQDGITLITKEEASGSSVTAEEAKKFL 705
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 62/111 (55%), Gaps = 15/111 (13%)
Query: 1 MART--REALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFG 51
M R+ + A++L +DV +M + +P +E K+ + +Q+++ E+ ++LFG
Sbjct: 1 MVRSGNKAAVVLCMDVGFTMSNSIPGIESPFEQAKKVITMFVQRQVFAENKDEIALVLFG 60
Query: 52 TEETENELTKEVGG--YEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDYM 99
T+ T+N L+ GG Y+++ V + + + D L++ ++ Q G+ D++
Sbjct: 61 TDGTDNPLS---GGDQYQNITVHRHLMLPDFDLLEDIESKIQPGSQQADFL 108
>gi|119590969|gb|EAW70563.1| X-ray repair complementing defective repair in Chinese hamster
cells 5 (double-strand-break rejoining; Ku autoantigen,
80kDa), isoform CRA_b [Homo sapiens]
Length = 827
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 110/472 (23%), Positives = 217/472 (45%), Gaps = 27/472 (5%)
Query: 214 LELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVP 273
L + + I++ YK +E+ D +++ + Y +D V
Sbjct: 346 LTIGSNLSIRIAAYKSILQERVKKTWTVVD----AKTLKKEDIQKETVYCLNDDDETEVL 401
Query: 274 PEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNILRHYYMKDVNL-FIA 331
E I+G+RYG +VP S + E +K+K E K +LGF +S + R ++M + L A
Sbjct: 402 KEDIIQGFRYGSDIVPFSKVDEEQMKYKSEGKCFSVLGFCKSSQVQRRFFMGNQVLKVFA 461
Query: 332 EPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFN 391
+ A VA+S+L A+ +++ VAIVR + + + + VGV P++ + +
Sbjct: 462 ARDDEAAAVALSSLIHALDDLDMVAIVRYAYDK-RANPQVGVAFPHIKHNY---ECLVYV 517
Query: 392 VLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKG-----EILQPEL 446
LPF ED+R++ F S K + P E Q A D L+ + LA + ++
Sbjct: 518 QLPFMEDLRQYMFSSL-KNSKKYAPTEAQLNAVDALIDSMSLAKKDEKTDTLEDLFPTTK 576
Query: 447 TPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKE 506
PNP +R + L ++ H PP+ + + P + +SQ + F + E
Sbjct: 577 IPNPRFQRLFQCLLHRALHPREPLPPIQQHIWNMLNPPAEVTTKSQIPLSKIKTLFPLIE 636
Query: 507 NPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVN-SMESKPVVTVDKIGDLTPIQDFEA 565
K + T + + + + D P ++ + S+ S +V +G + P ++F
Sbjct: 637 AKKKDQVTAQEIFQD-NHEDGPTAKKLKTEQGGAHFSVSSLAEGSVTSVGSVNPAENFRV 695
Query: 566 MMSRRDCPDWVDKAIEDMKNKIFGLLE---NSNEGINYPKAVELLVALRKGCILEQEPKQ 622
++ ++ + E+ N++ +E ++NE + K+++ + A R+ I E ++
Sbjct: 696 LVKQKKA------SFEEASNQLINHIEQFLDTNETPYFMKSIDCIRAFREEAIKFSEEQR 749
Query: 623 FNDVLEKVCKICRKRNFSTFFDFLMSKKLSLISKSEAVDSDITDDEAGSFIV 674
FN+ L+ + + + + F++ ++ ++LI+K EA S +T +EA F+
Sbjct: 750 FNNFLKALQEKVEIKQLNHFWEIVVQDGITLITKEEASGSSVTAEEAKKFLA 801
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 59/106 (55%), Gaps = 13/106 (12%)
Query: 4 TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
+ A++L +DV +M + +P +E K+ + +Q+++ E+ ++LFGT+ T+
Sbjct: 101 NKAAVVLCMDVGFTMSNSIPGIESPFEQAKKVITMFVQRQVFAENKDEIALVLFGTDGTD 160
Query: 57 NELTKEVGG--YEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDYM 99
N L+ GG Y+++ V + + + D L++ ++ Q G+ D++
Sbjct: 161 NPLS---GGDQYQNITVHRHLMLPDFDLLEDIESKIQPGSQQADFL 203
>gi|242785409|ref|XP_002480588.1| Ku family DNA helicase, putative [Talaromyces stipitatus ATCC
10500]
gi|218720735|gb|EED20154.1| Ku family DNA helicase, putative [Talaromyces stipitatus ATCC
10500]
Length = 715
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 170/737 (23%), Positives = 314/737 (42%), Gaps = 96/737 (13%)
Query: 5 REALLLLLDVSPSM--HSVLPDVEKL--CSRLIQKKLIYG-----KNHEVGVILFGTEET 55
+EA + ++DVS SM H+ D+ L R + K+ K VGV+ T+ T
Sbjct: 4 KEATVYIVDVSKSMKQHNHGRDISDLDWAMRYVWDKITTTVGTGRKTAAVGVVGLKTDGT 63
Query: 56 ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL-----PQGTCAGDYM--------LIK 102
+ L + GYE++ V+QD+ V L+ ++ L P T GD + +I
Sbjct: 64 KVPLDDD-EGYENITVMQDLGQV---LMPDIRRLREEIKPSHTDEGDAISSLIVAIHMIN 119
Query: 103 KYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGE 162
Y + K K+ + L+TD + +G ++ + +++ G+ + E
Sbjct: 120 VYTKKLKYKRKIYLVTDGKGAMSSDGLGDIASKLKSDNIELIVLGVDFDD--PDYGFKEE 177
Query: 163 PHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSE---- 218
EN+ LL + + + + + + FRGDL L +
Sbjct: 178 DKDLRKAENEALLRGLVEDCEGVYGTLAQAIQELDTPRVKVVRGIPSFRGDLRLGDPTRY 237
Query: 219 --KMKIKVWVYKKTGEEKFPTLKKY---SDKAPSTDKFATHEVKVDYEYK---------- 263
++I+V Y +T K P+ + D + + T E D +
Sbjct: 238 DTALRIQVERYYRTYVAKPPSASSFVPGGDPSQPSASIQTLEAGKDLDANLTNVRFVRTY 297
Query: 264 SVEDPS-----KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNIL 318
V+DP+ + + E+ KGY YG V IS ++ K + +++L+GF A +
Sbjct: 298 HVDDPTVAGGKRELEREELAKGYEYGRTAVHISESDENITKLETTAALELIGFIQADHYD 357
Query: 319 RHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNV 378
R M + N+ IA+ N +A +A+S+L A+ E++ AI R V + G+ ++V +L P++
Sbjct: 358 RFMNMSNSNVIIAQKTNEKAALALSSLIHALFELDCYAIGRLVVKDGKNPLIV-LLAPSI 416
Query: 379 SEKINIPD--SFYFNVLPFAEDVREFQFPSFSK-FPVSWQ--------PNEQQQEAADNL 427
PD LPF EDVR ++FP K +S + PNE A
Sbjct: 417 E-----PDYECLLEVQLPFYEDVRSYKFPPLDKVITISGKEVKEHRNLPNEDLVNAMSKY 471
Query: 428 VKMLDLAPSG-KGEILQP---ELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEP 483
V ++L +GE++ E +P L R + ++ H + PP + L ++++P
Sbjct: 472 VDSMELIDKDEEGEVIDTIPMEDNYSPLLHRIEQAVRWRAIHPNEPVPPPSERLTRLSKP 531
Query: 484 DPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNSM 543
+Q +D +K+ P K R++ D+P ++ +
Sbjct: 532 PKDAQERAQKYLDRIIHAADVKKVPPKTKG-----RKRNRDVDKP-----------LSGL 575
Query: 544 ESKPVVTVDKIGDLTP---IQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINY 600
+ ++ +K ++P I +F+ M++ + + + A M+ I + NS NY
Sbjct: 576 DVDELLHREKRAKISPTNAIPEFKQMLASAENVESIKDAASQMQKIIEDHIRNSFGDSNY 635
Query: 601 PKAVELLVALRKGCILEQEPKQFNDVL----EKVCKICRKRNFSTFFDFLMSKKLSLISK 656
+ VE L LR+ + +EP +N+ + EK+ K + + + K+ LI K
Sbjct: 636 DRVVEELGVLREELVDYEEPGLYNEFIRPLKEKILKEKLGGDRQELWWLIRRSKVGLIDK 695
Query: 657 SEAVDSDITDDEAGSFI 673
S + S++T++EA F+
Sbjct: 696 SVSDRSEVTEEEAKEFL 712
>gi|297722715|ref|NP_001173721.1| Os03g0856200 [Oryza sativa Japonica Group]
gi|255675060|dbj|BAH92449.1| Os03g0856200 [Oryza sativa Japonica Group]
Length = 97
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/97 (60%), Positives = 77/97 (79%)
Query: 1 MARTREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELT 60
MAR +EAL+LLLDV PSMH VL +VE +CS L+ KKL+Y ++ E+GV+LFGT+ET NEL
Sbjct: 1 MARNKEALVLLLDVGPSMHGVLQEVENICSTLVHKKLVYNRSDEIGVVLFGTKETSNELA 60
Query: 61 KEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGD 97
KE+GGY+HV V +DIKVVD +L++LP+GT GD
Sbjct: 61 KELGGYKHVVVARDIKVVDEETTNALQNLPRGTSPGD 97
>gi|62896765|dbj|BAD96323.1| ATP-dependent DNA helicase II variant [Homo sapiens]
Length = 732
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 110/471 (23%), Positives = 217/471 (46%), Gaps = 27/471 (5%)
Query: 214 LELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVP 273
L + + I++ YK +E+ D +++ + Y +D V
Sbjct: 251 LTIGSNLSIRIAAYKSILQERVKKTWTVVD----AKTLKKEDIQKETVYCLNDDDETEVL 306
Query: 274 PEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNILRHYYMKDVNL-FIA 331
E I+G+RYG +VP S + E +K+K E K +LGF +S + R ++M + L A
Sbjct: 307 KEDIIQGFRYGSDIVPFSKVDEEQMKYKSEGKCFSVLGFCKSSQVQRRFFMGNQVLKVFA 366
Query: 332 EPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFN 391
+ A VA+S+L A+ +++ VAIVR + + + + VGV P++ + +
Sbjct: 367 ARDDEAAAVALSSLIHALDDLDMVAIVRYAYDK-RANPQVGVAFPHIKHNY---ECLVYV 422
Query: 392 VLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKG-----EILQPEL 446
LPF ED+R++ F S K + P E Q A D L+ + LA + ++
Sbjct: 423 QLPFMEDLRQYMFSSL-KNSKKYAPTEAQLNAVDALIDSMSLAKKDEKTDTLEDLFPTTK 481
Query: 447 TPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKE 506
PNP +R + L ++ H PP+ + + P + +SQ + F + E
Sbjct: 482 IPNPRFQRLFQCLLHRALHPREPLPPIQQHIWNMLNPPAEVTTKSQIPLSKIKTLFPLIE 541
Query: 507 NPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVN-SMESKPVVTVDKIGDLTPIQDFEA 565
K + T + + + + D P ++ + S+ S +V +G + P ++F
Sbjct: 542 AKKKDQVTAQEIFQD-NHEDGPTAKKLKTEQGGAHFSVSSLAEGSVTSVGSVNPAENFRV 600
Query: 566 MMSRRDCPDWVDKAIEDMKNKIFGLLE---NSNEGINYPKAVELLVALRKGCILEQEPKQ 622
++ ++ + E+ N++ +E ++NE + K+++ + A R+ I E ++
Sbjct: 601 LVKQKKA------SFEEASNQLINHIEQFLDTNETPYFMKSIDCIRAFREEAIKFSEEQR 654
Query: 623 FNDVLEKVCKICRKRNFSTFFDFLMSKKLSLISKSEAVDSDITDDEAGSFI 673
FN+ L+ + + + + F++ ++ ++LI+K EA S +T +EA F+
Sbjct: 655 FNNFLKALQEKVEIKQLNHFWEIVVQDGITLITKEEASGSSVTAEEAKKFL 705
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 62/111 (55%), Gaps = 15/111 (13%)
Query: 1 MART--REALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFG 51
M R+ + A++L +DV +M + +P +E K+ + +Q+++ E+ ++LFG
Sbjct: 1 MVRSGNKAAVVLCMDVGFTMSNSIPGIESPFEQAKKVITMFVQRQVFAENKDEIALVLFG 60
Query: 52 TEETENELTKEVGG--YEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDYM 99
T+ T+N L+ GG Y+++ V + + + D L++ ++ Q G+ D++
Sbjct: 61 TDGTDNPLS---GGDQYQNITVHRHLMLPDFDLLEDIESKIQPGSQQADFL 108
>gi|10863945|ref|NP_066964.1| X-ray repair cross-complementing protein 5 [Homo sapiens]
gi|125731|sp|P13010.3|XRCC5_HUMAN RecName: Full=X-ray repair cross-complementing protein 5; AltName:
Full=86 kDa subunit of Ku antigen; AltName:
Full=ATP-dependent DNA helicase 2 subunit 2; AltName:
Full=ATP-dependent DNA helicase II 80 kDa subunit;
AltName: Full=CTC box-binding factor 85 kDa subunit;
Short=CTC85; Short=CTCBF; AltName: Full=DNA repair
protein XRCC5; AltName: Full=Ku80; AltName: Full=Ku86;
AltName: Full=Lupus Ku autoantigen protein p86; AltName:
Full=Nuclear factor IV; AltName: Full=Thyroid-lupus
autoantigen; Short=TLAA; AltName: Full=X-ray repair
complementing defective repair in Chinese hamster cells
5 (double-strand-break rejoining)
gi|307093|gb|AAA59475.1| Ku antigen [Homo sapiens]
gi|307094|gb|AAA36154.1| Ku (p70/p80) subunit [Homo sapiens]
gi|17512093|gb|AAH19027.1| X-ray repair complementing defective repair in Chinese hamster
cells 5 (double-strand-break rejoining) [Homo sapiens]
gi|66267600|gb|AAH95442.1| X-ray repair complementing defective repair in Chinese hamster
cells 5 (double-strand-break rejoining) [Homo sapiens]
gi|109821670|gb|ABG46942.1| X-ray repair complementing defective repair in Chinese hamster
cells 5 (double-strand-break rejoining; Ku autoantigen,
80kDa) [Homo sapiens]
gi|119590968|gb|EAW70562.1| X-ray repair complementing defective repair in Chinese hamster
cells 5 (double-strand-break rejoining; Ku autoantigen,
80kDa), isoform CRA_a [Homo sapiens]
gi|123984481|gb|ABM83586.1| X-ray repair complementing defective repair in Chinese hamster
cells 5 (double-strand-break rejoining; Ku autoantigen,
80kDa) [synthetic construct]
gi|123998499|gb|ABM86851.1| X-ray repair complementing defective repair in Chinese hamster
cells 5 (double-strand-break rejoining; Ku autoantigen,
80kDa) [synthetic construct]
gi|224487761|dbj|BAH24115.1| X-ray repair complementing defective repair in Chinese hamster
cells 5 [synthetic construct]
Length = 732
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 110/471 (23%), Positives = 217/471 (46%), Gaps = 27/471 (5%)
Query: 214 LELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVP 273
L + + I++ YK +E+ D +++ + Y +D V
Sbjct: 251 LTIGSNLSIRIAAYKSILQERVKKTWTVVD----AKTLKKEDIQKETVYCLNDDDETEVL 306
Query: 274 PEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNILRHYYMKDVNL-FIA 331
E I+G+RYG +VP S + E +K+K E K +LGF +S + R ++M + L A
Sbjct: 307 KEDIIQGFRYGSDIVPFSKVDEEQMKYKSEGKCFSVLGFCKSSQVQRRFFMGNQVLKVFA 366
Query: 332 EPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFN 391
+ A VA+S+L A+ +++ VAIVR + + + + VGV P++ + +
Sbjct: 367 ARDDEAAAVALSSLIHALDDLDMVAIVRYAYDK-RANPQVGVAFPHIKHNY---ECLVYV 422
Query: 392 VLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKG-----EILQPEL 446
LPF ED+R++ F S K + P E Q A D L+ + LA + ++
Sbjct: 423 QLPFMEDLRQYMFSSL-KNSKKYAPTEAQLNAVDALIDSMSLAKKDEKTDTLEDLFPTTK 481
Query: 447 TPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKE 506
PNP +R + L ++ H PP+ + + P + +SQ + F + E
Sbjct: 482 IPNPRFQRLFQCLLHRALHPREPLPPIQQHIWNMLNPPAEVTTKSQIPLSKIKTLFPLIE 541
Query: 507 NPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVN-SMESKPVVTVDKIGDLTPIQDFEA 565
K + T + + + + D P ++ + S+ S +V +G + P ++F
Sbjct: 542 AKKKDQVTAQEIFQD-NHEDGPTAKKLKTEQGGAHFSVSSLAEGSVTSVGSVNPAENFRV 600
Query: 566 MMSRRDCPDWVDKAIEDMKNKIFGLLE---NSNEGINYPKAVELLVALRKGCILEQEPKQ 622
++ ++ + E+ N++ +E ++NE + K+++ + A R+ I E ++
Sbjct: 601 LVKQKKA------SFEEASNQLINHIEQFLDTNETPYFMKSIDCIRAFREEAIKFSEEQR 654
Query: 623 FNDVLEKVCKICRKRNFSTFFDFLMSKKLSLISKSEAVDSDITDDEAGSFI 673
FN+ L+ + + + + F++ ++ ++LI+K EA S +T +EA F+
Sbjct: 655 FNNFLKALQEKVEIKQLNHFWEIVVQDGITLITKEEASGSSVTAEEAKKFL 705
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 62/111 (55%), Gaps = 15/111 (13%)
Query: 1 MART--REALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFG 51
M R+ + A++L +DV +M + +P +E K+ + +Q+++ E+ ++LFG
Sbjct: 1 MVRSGNKAAVVLCMDVGFTMSNSIPGIESPFEQAKKVITMFVQRQVFAENKDEIALVLFG 60
Query: 52 TEETENELTKEVGG--YEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDYM 99
T+ T+N L+ GG Y+++ V + + + D L++ ++ Q G+ D++
Sbjct: 61 TDGTDNPLS---GGDQYQNITVHRHLMLPDFDLLEDIESKIQPGSQQADFL 108
>gi|410223938|gb|JAA09188.1| X-ray repair complementing defective repair in Chinese hamster
cells 5 (double-strand-break rejoining) [Pan
troglodytes]
gi|410261912|gb|JAA18922.1| X-ray repair complementing defective repair in Chinese hamster
cells 5 (double-strand-break rejoining) [Pan
troglodytes]
gi|410342867|gb|JAA40380.1| X-ray repair complementing defective repair in Chinese hamster
cells 5 (double-strand-break rejoining) [Pan
troglodytes]
Length = 732
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 110/471 (23%), Positives = 217/471 (46%), Gaps = 27/471 (5%)
Query: 214 LELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVP 273
L + + I++ YK +E+ D +++ + Y +D V
Sbjct: 251 LTIGSNLSIRIAAYKSILQERVKKTWTVVD----AKTLKKEDIQKETVYCLNDDDETEVL 306
Query: 274 PEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNILRHYYMKDVNL-FIA 331
E I+G+RYG +VP S + E +K+K E K +LGF +S + R ++M + L A
Sbjct: 307 KEDIIQGFRYGSDIVPFSKVDEEQMKYKSEGKCFSVLGFCKSSQVQRRFFMGNQVLKVFA 366
Query: 332 EPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFN 391
+ A VA+S+L A+ +++ VAIVR + + + + VGV P++ + +
Sbjct: 367 ARDDEAAAVALSSLIHALDDLDMVAIVRYAYDK-RANPQVGVAFPHIKHNY---ECLVYV 422
Query: 392 VLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKG-----EILQPEL 446
LPF ED+R++ F S K + P E Q A D L+ + LA + ++
Sbjct: 423 QLPFMEDLRQYMFSSL-KNSKKYAPTEAQLNAVDALIDSMSLAKKDEKTDTLEDLFPTTK 481
Query: 447 TPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKE 506
PNP +R + L ++ H PP+ + + P + +SQ + F + E
Sbjct: 482 IPNPRFQRLFQCLLHRALHPREPLPPIQQHIWNMLNPPAEVTTKSQIPLSKIKTLFPLIE 541
Query: 507 NPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVN-SMESKPVVTVDKIGDLTPIQDFEA 565
K + T + + + + D P ++ + S+ S +V +G + P ++F
Sbjct: 542 AKKKDQVTAQEIFQD-NHEDGPTAKKLKTEQGGAHFSVSSLAEGSVTSVGSVNPAENFRV 600
Query: 566 MMSRRDCPDWVDKAIEDMKNKIFGLLE---NSNEGINYPKAVELLVALRKGCILEQEPKQ 622
++ ++ + E+ N++ +E ++NE + K+++ + A R+ I E ++
Sbjct: 601 LVKQKKA------SFEEASNQLINHIEQFLDTNETPYFMKSIDCIRAFREEAIKFSEEQR 654
Query: 623 FNDVLEKVCKICRKRNFSTFFDFLMSKKLSLISKSEAVDSDITDDEAGSFI 673
FN+ L+ + + + + F++ ++ ++LI+K EA S +T +EA F+
Sbjct: 655 FNNFLKALREKVEIKQLNHFWEIVVQDGITLITKEEASGSSVTAEEAKKFL 705
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 62/111 (55%), Gaps = 15/111 (13%)
Query: 1 MART--REALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFG 51
M R+ + A++L +DV +M + +P +E K+ + +Q+++ E+ ++LFG
Sbjct: 1 MVRSGNKAAVVLCMDVGFTMSNSIPGIESPFEQAKKVITMFVQRQVFAENKDEIALVLFG 60
Query: 52 TEETENELTKEVGG--YEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDYM 99
T+ T+N L+ GG Y+++ V + + + D L++ ++ Q G+ D++
Sbjct: 61 TDGTDNPLS---GGDQYQNITVHRHLMLPDFDLLEDIESKIQPGSQQADFL 108
>gi|426338512|ref|XP_004033222.1| PREDICTED: X-ray repair cross-complementing protein 5 [Gorilla
gorilla gorilla]
Length = 732
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 110/471 (23%), Positives = 217/471 (46%), Gaps = 27/471 (5%)
Query: 214 LELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVP 273
L + + I++ YK +E+ D +++ + Y +D V
Sbjct: 251 LTIGSNLSIRIAAYKSILQERVKKTWTVVD----AKTLKKEDIQKETVYCLNDDDETEVL 306
Query: 274 PEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNILRHYYMKDVNL-FIA 331
E I+G+RYG +VP S + E +K+K E K +LGF +S + R ++M + L A
Sbjct: 307 KEDIIQGFRYGSDIVPFSKVDEEQMKYKSEGKCFSVLGFCKSSQVQRRFFMGNQVLKVFA 366
Query: 332 EPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFN 391
+ A VA+S+L A+ +++ VAIVR + + + + VGV P++ + +
Sbjct: 367 ARDDEAAAVALSSLIHALDDLDMVAIVRYAYDK-RANPQVGVAFPHIKHNY---ECLVYV 422
Query: 392 VLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKG-----EILQPEL 446
LPF ED+R++ F S K + P E Q A D L+ + LA + ++
Sbjct: 423 QLPFMEDLRQYMFSSL-KNSKKYAPTEAQLNAVDALIDSMSLAKKDEKTDTLEDLFPTTK 481
Query: 447 TPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKE 506
PNP +R + L ++ H PP+ + + P + +SQ + F + E
Sbjct: 482 IPNPRFQRLFQCLLHRALHPREPLPPIQQHIWNMLNPPAEVTTKSQIPLSKIKTLFPLIE 541
Query: 507 NPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVN-SMESKPVVTVDKIGDLTPIQDFEA 565
K + T + + + + D P ++ + S+ S +V +G + P ++F
Sbjct: 542 AKKKDQVTAQEIFQD-NHEDGPTAKKLKTEQGGAHFSVSSLAEGSVTSVGSVNPAENFRV 600
Query: 566 MMSRRDCPDWVDKAIEDMKNKIFGLLE---NSNEGINYPKAVELLVALRKGCILEQEPKQ 622
++ ++ + E+ N++ +E ++NE + K+++ + A R+ I E ++
Sbjct: 601 LVKQKKA------SFEEASNQLINHIEQFLDTNETPYFMKSIDCIRAFREEAIKFSEEQR 654
Query: 623 FNDVLEKVCKICRKRNFSTFFDFLMSKKLSLISKSEAVDSDITDDEAGSFI 673
FN+ L+ + + + + F++ ++ ++LI+K EA S +T +EA F+
Sbjct: 655 FNNFLKALREKVEIKQLNHFWEIVVQDGITLITKEEASGSSVTAEEAKKFL 705
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 62/111 (55%), Gaps = 15/111 (13%)
Query: 1 MART--REALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFG 51
M R+ + A++L +DV +M + +P +E K+ + +Q+++ E+ ++LFG
Sbjct: 1 MVRSGNKAAVVLCMDVGFTMSNSIPGIESPFEQAKKVITMFVQRQVFAENKDEIALVLFG 60
Query: 52 TEETENELTKEVGG--YEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDYM 99
T+ T+N L+ GG Y+++ V + + + D L++ ++ Q G+ D++
Sbjct: 61 TDGTDNPLS---GGDQYQNITVHRHLMLPDFDLLEDIESKIQPGSQQADFL 108
>gi|62988844|gb|AAY24231.1| unknown [Homo sapiens]
Length = 568
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 110/472 (23%), Positives = 217/472 (45%), Gaps = 27/472 (5%)
Query: 214 LELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVP 273
L + + I++ YK +E+ D +++ + Y +D V
Sbjct: 87 LTIGSNLSIRIAAYKSILQERVKKTWTVVD----AKTLKKEDIQKETVYCLNDDDETEVL 142
Query: 274 PEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNILRHYYMKDVNL-FIA 331
E I+G+RYG +VP S + E +K+K E K +LGF +S + R ++M + L A
Sbjct: 143 KEDIIQGFRYGSDIVPFSKVDEEQMKYKSEGKCFSVLGFCKSSQVQRRFFMGNQVLKVFA 202
Query: 332 EPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFN 391
+ A VA+S+L A+ +++ VAIVR + + + + VGV P++ + +
Sbjct: 203 ARDDEAAAVALSSLIHALDDLDMVAIVRYAYDK-RANPQVGVAFPHIKHNY---ECLVYV 258
Query: 392 VLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKG-----EILQPEL 446
LPF ED+R++ F S K + P E Q A D L+ + LA + ++
Sbjct: 259 QLPFMEDLRQYMFSSL-KNSKKYAPTEAQLNAVDALIDSMSLAKKDEKTDTLEDLFPTTK 317
Query: 447 TPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKE 506
PNP +R + L ++ H PP+ + + P + +SQ + F + E
Sbjct: 318 IPNPRFQRLFQCLLHRALHPREPLPPIQQHIWNMLNPPAEVTTKSQIPLSKIKTLFPLIE 377
Query: 507 NPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVN-SMESKPVVTVDKIGDLTPIQDFEA 565
K + T + + + + D P ++ + S+ S +V +G + P ++F
Sbjct: 378 AKKKDQVTAQEIFQD-NHEDGPTAKKLKTEQGGAHFSVSSLAEGSVTSVGSVNPAENFRV 436
Query: 566 MMSRRDCPDWVDKAIEDMKNKIFGLLE---NSNEGINYPKAVELLVALRKGCILEQEPKQ 622
++ ++ + E+ N++ +E ++NE + K+++ + A R+ I E ++
Sbjct: 437 LVKQKKA------SFEEASNQLINHIEQFLDTNETPYFMKSIDCIRAFREEAIKFSEEQR 490
Query: 623 FNDVLEKVCKICRKRNFSTFFDFLMSKKLSLISKSEAVDSDITDDEAGSFIV 674
FN+ L+ + + + + F++ ++ ++LI+K EA S +T +EA F+
Sbjct: 491 FNNFLKALQEKVEIKQLNHFWEIVVQDGITLITKEEASGSSVTAEEAKKFLA 542
>gi|346465795|gb|AEO32742.1| hypothetical protein [Amblyomma maculatum]
Length = 555
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 121/483 (25%), Positives = 217/483 (44%), Gaps = 40/483 (8%)
Query: 208 TIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVED 267
T + +LE+ + I + Y K E K K++ K V+ D Y ++
Sbjct: 70 TPWNANLEIGRDISIPISSYIKVVEVKTKPWKQF------VAKRTEAPVRCDTIYYRNDE 123
Query: 268 PSKVVPPEQRIKGYRYGPQVVPISS---AEWEAVKFKPEKSVKLLGFTDASNILRHYYMK 324
+ + + YRYG +VP + A + K + +++LGFTD SNI RHYYM
Sbjct: 124 KETELERDSTVLAYRYGSTLVPFTDENRAAMDGNKGGSGRGLQVLGFTDESNIKRHYYMG 183
Query: 325 DVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN 383
D +I A G++ A A+SAL +A+K+ VAIVR + + + +G L+P + E+
Sbjct: 184 DKTSYIVARKGDNCAGAALSALIQALKKSKMVAIVRYAF-SDKSAPRMGFLSPRIKERY- 241
Query: 384 IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQ----PNEQQQEAADNLVKMLDLAP---S 436
+ F LP+ ED+R F F P+ P + Q D+L+ +DL +
Sbjct: 242 --ECLVFIQLPYMEDLRRFTF-----LPLDTNKDNVPTDMQLSLFDDLIAAMDLTAVDIN 294
Query: 437 GK-GEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAI 495
G+ E+ + T NP L+RFY ++ ++ H PP+ + + ++A ++ +
Sbjct: 295 GEPEELFKSSQTSNPYLQRFYQCVQHRAMHPKDPVPPIPQHIADAIKTPKAVMALAEPIL 354
Query: 496 DAFCGQFVIKENPKLKKSTRRFL------REKPSGSDEPNGDGSVSDAQAVNSMESKPVV 549
QF ++E +K + +++ + SDEP + +D SM
Sbjct: 355 QKIASQFPLEEVAPVKVPQDNGVGPNDHGKDQVTNSDEPAPKRARTDV----SMADLVAT 410
Query: 550 TVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVA 609
K+ + P++DF+ ++S ++ + ++ I L +++ + KAV L A
Sbjct: 411 ATTKVDVVNPVEDFKKLVSSKE--QSYSEVCHQLEEVILKLFKDALGRAAHGKAVRCLRA 468
Query: 610 LRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKKLSLISKSEAVDSDITDDEA 669
R+ + + P FN L+K+ K+ + ++ L + + I K E S D EA
Sbjct: 469 YRQSALEKTSPDLFNTFLKKLKKLYSG-DQDDVWNLLKKEAVPPIGKKECEQSTWADSEA 527
Query: 670 GSF 672
F
Sbjct: 528 EQF 530
>gi|67969531|dbj|BAE01114.1| unnamed protein product [Macaca fascicularis]
Length = 618
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 111/472 (23%), Positives = 217/472 (45%), Gaps = 27/472 (5%)
Query: 214 LELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVP 273
L + + I++ YK +E+ D +++ + Y +D V
Sbjct: 137 LTIGSNLSIRIAAYKSILQERVKKTWTVVD----AKTLKKEDIQKETVYCLNDDDETEVL 192
Query: 274 PEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNILRHYYMKDVNL-FIA 331
E I+G RYG +VP S + E +K+K E K +LGF +S + R ++M + L A
Sbjct: 193 KEDIIQGSRYGSDIVPFSKVDEEQMKYKSEGKCFSVLGFCKSSQVQRRFFMGNQVLKVFA 252
Query: 332 EPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFN 391
+ A VA+S+L A+++++ VAIVR + + + + VGV P++ + +
Sbjct: 253 ARDDEAAAVALSSLIHALEDLDMVAIVRYAYDK-RANPQVGVAFPHIKHNY---ECLVYV 308
Query: 392 VLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKG-----EILQPEL 446
LPF ED+R++ F S K + P E Q A D L+ + LA + ++
Sbjct: 309 QLPFMEDLRQYMFSSL-KNSKKYAPTEAQLNAVDALIDSMSLAKKDEKTDTLEDLFPTTK 367
Query: 447 TPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKE 506
PNP +R + L ++ H PP+ + + P + +SQ + F + E
Sbjct: 368 IPNPRFQRLFQCLLHRALHPREPLPPIQQHIWNMLNPPAEVTTKSQIPLSKIKTLFPLIE 427
Query: 507 NPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVN-SMESKPVVTVDKIGDLTPIQDFEA 565
K + T + + + + D P ++ + S+ S +V +G + P ++F
Sbjct: 428 AKKKDQVTAQDIFQD-NHEDGPTAKKLKTEQGGAHFSVSSLAEGSVTSVGSVNPAENFRV 486
Query: 566 MMSRRDCPDWVDKAIEDMKNKIFGLLE---NSNEGINYPKAVELLVALRKGCILEQEPKQ 622
++ ++ + E+ N++ +E ++NE + K+++ + A R+ I E ++
Sbjct: 487 LVKQKKA------SFEEASNQLINHIEQFLDTNETPYFMKSMDCIRAFREEAIKFSEEQR 540
Query: 623 FNDVLEKVCKICRKRNFSTFFDFLMSKKLSLISKSEAVDSDITDDEAGSFIV 674
FN+ L+ + + + + F++ ++ ++LI+K EA S +T DEA F+
Sbjct: 541 FNNFLKALREKVEIKQLNHFWEIVVQDGITLITKEEASGSSVTADEAKKFLA 592
>gi|367050686|ref|XP_003655722.1| hypothetical protein THITE_2119725 [Thielavia terrestris NRRL 8126]
gi|347002986|gb|AEO69386.1| hypothetical protein THITE_2119725 [Thielavia terrestris NRRL 8126]
Length = 721
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 160/699 (22%), Positives = 288/699 (41%), Gaps = 101/699 (14%)
Query: 41 KNHEVGVILFGTEETENELTKE-VGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGD 97
K +GV+ TEET N +E + GY+H+ VLQ+I ++ L+ L P + GD
Sbjct: 49 KTWTLGVVGLNTEETNNAQDREGLEGYDHISVLQEIGPASMSTLRDLRSLIQPSRSNGGD 108
Query: 98 YM--------LIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLR 149
+ +I+++ + K + + L+T+A P+ D + +++ ++V G+
Sbjct: 109 AISAVVVALSMIEEFTKKLKYNRRIILVTNAESPIDDESLEDVASRLNESNIELVVIGID 168
Query: 150 MKNIVV--------RASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKT 201
+ RA + E +R +++ + + + + L + +
Sbjct: 169 FDDPEYGFKEEDKSRAKAANEKTLRKLVDQCSNGVFGTMAQAVEELAIP---------RI 219
Query: 202 RDISPVTIFRGDLELSE------KMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHE 255
+ + P + G L L + + I V Y KT P A T
Sbjct: 220 KPVRPFKAYDGPLTLGDPSKYESALSIHVERYFKTKRAMAPAASTVVVNAERVGPSQTQA 279
Query: 256 VKVDYEYKS-------------VEDPS-----KVVPPEQRIKGYRYGPQVVPISSAEWEA 297
+ D E V DP + V E KGY+YG VVP S ++
Sbjct: 280 LDEDIEMGGTGFSGVKQMRTYRVNDPDAPGGKRDVEFEDLAKGYQYGRTVVPFSESDLSV 339
Query: 298 VKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAI 357
K + +KS +LGF + + M + + +A+ N +A + +SAL + E+ A+
Sbjct: 340 TKLETKKSFTILGFVPSRSYNFFLNMGETGVIVAQKHNEQAELGLSALIHTLHELESYAV 399
Query: 358 VRCVWRQGQQSVVVGVLTPNVSEKINIPDSF---YFNVLPFAEDVREFQFPSFSK-FPVS 413
R V + G Q + +L PN + + D F Y LPFAEDVR +QFP K V+
Sbjct: 400 ARYVQKDGAQPQIF-MLKPNPA----LEDEFECLYDVPLPFAEDVRSYQFPPLDKVLTVT 454
Query: 414 WQ--------PNEQQQEAADNLVKMLDLAPSGKGEILQPELTP----------NPALERF 455
P+E ++A + V +DL+ G + E P NP + R
Sbjct: 455 GNVIKEHRLLPSEDLKQAMSDFVDAMDLS----GFEVDDEGNPTEYASIDELYNPIIHRL 510
Query: 456 YHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTR 515
+ ++ + D + L + ++P L+ +++S I+A IK+ P K R
Sbjct: 511 NQAIRARAVNPDGPIESPAEILLRFSKPPEKLIKKAKSEIEALADAAEIKKVPA-KAQGR 569
Query: 516 RFLREKPSGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDW 575
R G EP S D A+ + ++++ I +F+ M++
Sbjct: 570 R-------GRKEPVKPLSGLDIDALLGESKRTTISLE-----NAIPEFKQMLATAADDAT 617
Query: 576 VDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICR 635
V+ A + M + + L+ +S ++Y +A E L +R+ I + P +N L + K
Sbjct: 618 VENAAKQMGDIVRKLVRDSFADLSYARAAENLRVMREELISLEVPALYNKFLTGLKKSIL 677
Query: 636 KRNFS-----TFFDFLMSKKLSLISKSEAVDSDITDDEA 669
+ +F ++ L LI++ E+ S++T DEA
Sbjct: 678 SGELNGDRREMWFKHVVGGHLGLITQDESEVSEVTADEA 716
>gi|317030003|ref|XP_001391676.2| ATP-dependent DNA helicase II subunit 2 [Aspergillus niger CBS
513.88]
Length = 714
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 164/696 (23%), Positives = 291/696 (41%), Gaps = 106/696 (15%)
Query: 45 VGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL-----PQGTCAGDYM 99
+GV+ T+ET NEL + Y H+ VL IK L+ ++ L P T GD +
Sbjct: 53 IGVLGLRTDETANELEDD-PDYSHISVLSGIK---QFLMPDIRGLSDRIKPSKTNKGDAI 108
Query: 100 --------LIKKYGETYKGKKHLCLITDALCPLKDPDVG-----TKEDQVSTIAR----Q 142
+I + K K+ + L+T+ P+ ++ KED + I
Sbjct: 109 SALVLAIQMIITQCKKLKYKRRIVLVTNGQGPMNPDNLSEITKKIKEDNIELIILGPDFD 168
Query: 143 MVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTR 202
+G++ ++ R + EN+ LL ++ ++ + + +
Sbjct: 169 DPEYGVKEEDKDPRKA-----------ENETLLRSLAEDCEGAYGTLEQAVAELETPRVK 217
Query: 203 DISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHE------- 255
F+G L+L + V + E++ + Y KAPS +F
Sbjct: 218 TTRITASFKGHLQLGNPAEYDTAV--RIPVERY--YRTYVAKAPSASQFTVRNEEEMGMA 273
Query: 256 --------------VKVDYEYK----SVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEA 297
V+ + Y+ + E+ + V EQ KGY YG +VPIS +
Sbjct: 274 AAAAGSQEGSSLVGVRNNRSYQIDDGTTEEGVRDVDREQLAKGYEYGRTLVPISETDENI 333
Query: 298 VKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAI 357
+ +++LLGF + R+ +M N+ IA+ N +A +A+S+ A+ E+ A+
Sbjct: 334 TTLETFAAIELLGFIQSDRYDRYMHMSTTNIIIAQRANDKAALALSSFIHALFELESYAV 393
Query: 358 VRCVWRQGQQSVVVGVLTPNVSEKINIPD--SFYFNVLPFAEDVREFQFPSFSK-FPVSW 414
R V ++ + V+V VL P++ PD LPFAEDVR ++FP + VS
Sbjct: 394 ARMVLKENKPPVIV-VLAPSIE-----PDYECLLEAQLPFAEDVRTYRFPPLDRVITVSG 447
Query: 415 Q--------PNEQQQEAADNLVKMLDLAPSGKG----EILQPELTPNPALERFYHHLELK 462
+ PN+ A D VK ++L + E L + + +P L R + +
Sbjct: 448 KVVTQHRNLPNDDLLNAMDKYVKSMELTDMDENGDPTESLPIDDSFSPVLHRIDSAIRHR 507
Query: 463 SEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLR-EK 521
+ H + PP L K + P L+ +S+ +D +K+ P K T+R EK
Sbjct: 508 AIHPNDPIPPPASVLTKFSHPPDDLVEKSKKYLDKLVAVSDVKKVPPKTKGTKRTRETEK 567
Query: 522 PSGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIE 581
P S D A+ E + KI I +F+ +S+ + + + A++
Sbjct: 568 PL---------SGLDVDALLHQEKRT-----KISPNNAIPEFKQTLSQAENIEIIKDAVK 613
Query: 582 DMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKR---- 637
M I + +S +NY + E L +R+ I +EP +ND L+++ + K
Sbjct: 614 QMSTIIEDQIRHSLGDVNYHRVTEGLGVMREELIDYEEPALYNDFLKQLKEKLLKEELGG 673
Query: 638 NFSTFFDFLMSKKLSLISKSEAVDSDITDDEAGSFI 673
+ + L KL LI + E+ S++ ++EA +F+
Sbjct: 674 DRRELWWLLRRSKLGLIEQRESEHSEVREEEAKAFM 709
>gi|242785406|ref|XP_002480587.1| Ku family DNA helicase, putative [Talaromyces stipitatus ATCC
10500]
gi|218720734|gb|EED20153.1| Ku family DNA helicase, putative [Talaromyces stipitatus ATCC
10500]
Length = 719
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 169/733 (23%), Positives = 312/733 (42%), Gaps = 96/733 (13%)
Query: 5 REALLLLLDVSPSM--HSVLPDVEKL--CSRLIQKKLIYG-----KNHEVGVILFGTEET 55
+EA + ++DVS SM H+ D+ L R + K+ K VGV+ T+ T
Sbjct: 4 KEATVYIVDVSKSMKQHNHGRDISDLDWAMRYVWDKITTTVGTGRKTAAVGVVGLKTDGT 63
Query: 56 ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL-----PQGTCAGDYM--------LIK 102
+ L + GYE++ V+QD+ V L+ ++ L P T GD + +I
Sbjct: 64 KVPLDDD-EGYENITVMQDLGQV---LMPDIRRLREEIKPSHTDEGDAISSLIVAIHMIN 119
Query: 103 KYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGE 162
Y + K K+ + L+TD + +G ++ + +++ G+ + E
Sbjct: 120 VYTKKLKYKRKIYLVTDGKGAMSSDGLGDIASKLKSDNIELIVLGVDFDD--PDYGFKEE 177
Query: 163 PHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSE---- 218
EN+ LL + + + + + + FRGDL L +
Sbjct: 178 DKDLRKAENEALLRGLVEDCEGVYGTLAQAIQELDTPRVKVVRGIPSFRGDLRLGDPTRY 237
Query: 219 --KMKIKVWVYKKTGEEKFPTLKKY---SDKAPSTDKFATHEVKVDYEYK---------- 263
++I+V Y +T K P+ + D + + T E D +
Sbjct: 238 DTALRIQVERYYRTYVAKPPSASSFVPGGDPSQPSASIQTLEAGKDLDANLTNVRFVRTY 297
Query: 264 SVEDPS-----KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNIL 318
V+DP+ + + E+ KGY YG V IS ++ K + +++L+GF A +
Sbjct: 298 HVDDPTVAGGKRELEREELAKGYEYGRTAVHISESDENITKLETTAALELIGFIQADHYD 357
Query: 319 RHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNV 378
R M + N+ IA+ N +A +A+S+L A+ E++ AI R V + G+ ++V +L P++
Sbjct: 358 RFMNMSNSNVIIAQKTNEKAALALSSLIHALFELDCYAIGRLVVKDGKNPLIV-LLAPSI 416
Query: 379 SEKINIPD--SFYFNVLPFAEDVREFQFPSFSK-FPVSWQ--------PNEQQQEAADNL 427
PD LPF EDVR ++FP K +S + PNE A
Sbjct: 417 E-----PDYECLLEVQLPFYEDVRSYKFPPLDKVITISGKEVKEHRNLPNEDLVNAMSKY 471
Query: 428 VKMLDLAPSG-KGEILQP---ELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEP 483
V ++L +GE++ E +P L R + ++ H + PP + L ++++P
Sbjct: 472 VDSMELIDKDEEGEVIDTIPMEDNYSPLLHRIEQAVRWRAIHPNEPVPPPSERLTRLSKP 531
Query: 484 DPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNSM 543
+Q +D +K+ P K R++ D+P ++ +
Sbjct: 532 PKDAQERAQKYLDRIIHAADVKKVPPKTKG-----RKRNRDVDKP-----------LSGL 575
Query: 544 ESKPVVTVDKIGDLTP---IQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINY 600
+ ++ +K ++P I +F+ M++ + + + A M+ I + NS NY
Sbjct: 576 DVDELLHREKRAKISPTNAIPEFKQMLASAENVESIKDAASQMQKIIEDHIRNSFGDSNY 635
Query: 601 PKAVELLVALRKGCILEQEPKQFNDVL----EKVCKICRKRNFSTFFDFLMSKKLSLISK 656
+ VE L LR+ + +EP +N+ + EK+ K + + + K+ LI K
Sbjct: 636 DRVVEELGVLREELVDYEEPGLYNEFIRPLKEKILKEKLGGDRQELWWLIRRSKVGLIDK 695
Query: 657 SEAVDSDITDDEA 669
S + S++T++EA
Sbjct: 696 SVSDRSEVTEEEA 708
>gi|342885898|gb|EGU85850.1| hypothetical protein FOXB_03698 [Fusarium oxysporum Fo5176]
Length = 716
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 165/735 (22%), Positives = 311/735 (42%), Gaps = 93/735 (12%)
Query: 5 REALLLLLDVSPSMHSVLP-----DVEKLCSRLIQKKL-IYGKNHE---VGVILFGTEET 55
+EA + +LD+ +M D+E + K + I N + VGV+ T+ET
Sbjct: 4 KEATVFILDLGSTMAQTQSGRSESDLEYSMQYVWDKIIDIVAANRKTLCVGVLGLRTDET 63
Query: 56 ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDYM--------LIKKYG 105
+N+L + GYE++ VLQ++ + +++L+ L P T +GD + +I +
Sbjct: 64 DNKLQDD-DGYENIAVLQELGPMTMSSLRNLQSLVKPSNTWSGDAVSAIVLAVDMIDTFT 122
Query: 106 ETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHM 165
+ K + + L+TD P+ D+G +++ Q+ G+ + +P
Sbjct: 123 KKLKWNRKIFLVTDGQGPMDADDLGDISKKMNDSNIQLTVLGVDFDDPEYGFKEEDKPST 182
Query: 166 RVIIENDNLLNIFSKKSSAKTL--FVDSTTSLRGARKTRDISPVTIFRGDLELSE----- 218
+ EN+ L + ++ L R + + P + G L L +
Sbjct: 183 KK--ENEQALRSLVNDCQDGVIANITEAIDELDTPR-IKAVKPYKTYDGPLTLGDPNTFP 239
Query: 219 -KMKIKVWVYKKTG-------------EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKS 264
+ I V Y KT E P + A + VK YK
Sbjct: 240 AALNINVERYFKTKLARPLTASTVVVKSEGAPDSEPTQADADDMEGIEFSAVKQARSYK- 298
Query: 265 VEDPS-----KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILR 319
V DP + V + KGY YG V IS +E+ K +KS ++GF S
Sbjct: 299 VNDPDAPGGKRDVEFDDLAKGYEYGRTAVHISESEYNITKIDTQKSFSIVGFIPCSKYEP 358
Query: 320 HYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVS 379
+ + + +A ++++ +A+S+L A+ E+ AI R V + G+ ++V +L P+V
Sbjct: 359 FLNLGETCVTVARKFDAKSALALSSLVWALSELESYAIARIVTKDGKDPLLV-LLAPSVE 417
Query: 380 EKINIPDSFYFNVLPFAEDVREFQFPSFSK-FPVSWQ--------PNEQQQEAADNLVKM 430
+ + Y LPFAED+R +QFP K V+ Q P ++ +A + V
Sbjct: 418 PDM---ECLYDIPLPFAEDIRSYQFPPLDKVITVTGQTLTTHRLLPTDELSDAMSDYVDA 474
Query: 431 LDLAPSG---KG---EILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPD 484
+DL+ G KG E + + T NP + R H ++ ++ + + P + L + + P
Sbjct: 475 MDLSTYGLDDKGDPDEYVSIDETFNPTVHRVNHAVKSRALYPERPVPDVPSILLRFSHPT 534
Query: 485 PTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNSME 544
L+ Q +DA +K+ P K R KP ++ ++
Sbjct: 535 QDLIETVQRKVDALVEAADVKKVPPKAKGKRGRETVKP-----------------ISGLD 577
Query: 545 SKPVVTVDKIGDLTP---IQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYP 601
++ ++ GD++P + +F+ M++ + +++A + M I + S Y
Sbjct: 578 VDALLGEEEKGDISPDNAVPEFKQMLAATEELSQIEEAAKQMGAIISTFVMESFGDAKYQ 637
Query: 602 KAVELLVALRKGCILEQEPKQFN----DVLEKVCKICRKRNFSTFFDFLMSKKLSLISKS 657
+A+E L +R+ I +EP +N D+ +++ + F+ + +L LI K
Sbjct: 638 RALECLGVMREELINLEEPGLYNTFMQDMKKQLISGALGGDRRDFWFKVRWGRLGLIDKQ 697
Query: 658 EAVDSDITDDEAGSF 672
++ SD++ ++A F
Sbjct: 698 QSEVSDVSPEDADEF 712
>gi|71650382|ref|XP_813890.1| KU80 protein [Trypanosoma cruzi strain CL Brener]
gi|70878816|gb|EAN92039.1| KU80 protein, putative [Trypanosoma cruzi]
Length = 744
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 159/738 (21%), Positives = 316/738 (42%), Gaps = 97/738 (13%)
Query: 5 REALLLLLDVS-PSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENE-LTKE 62
R AL+ LD++ PS L + C R + +++ + E+ ++L GT + N +
Sbjct: 4 RSALVFALDLNCPSASLAL--AAEFCRRSAETTMMFAPHDEMALVLAGTCDPHNPPQNGQ 61
Query: 63 VGG--YEHVKVLQDIKVVDGHLVQSLKHL--PQGTC------------AGDYMLIKKYGE 106
GG ++H+ V + ++ L H+ P C D++L ++
Sbjct: 62 KGGERFKHISVPCALAAPTVEFLEPLAHITPPPPPCERHEVDFLETLFVCDHVLRERTAN 121
Query: 107 TYKGKKHLCLITDALCPLKDPDVGTKEDQVSTI------ARQMVAFGLRMKNIVVRASLS 160
++ + LITDA DV K+D + + +V G+ V A+
Sbjct: 122 KCY-QRVVYLITDA-----HTDVARKDDMNTLLESFQQHGVSLVVIGIDFTETSVDATDD 175
Query: 161 GE------PHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGAR--KTRDISPVTIFRG 212
E + + +N+ +L++ ++ V +L+ + + R I+ + R
Sbjct: 176 EERDDKSLTDLSLKAQNERVLHVMCSLLGEESKVVSLEEALQEVQELRRRKITQRALLRV 235
Query: 213 DLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVV 272
L + + +++ ++ KT EE+ PT+K+ + EV + ++ + + + +
Sbjct: 236 VLSIGD-VRLATQMFTKTQEERLPTMKRTTANG--------EEVYMKTIFQDLSEDAAPL 286
Query: 273 PPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAE 332
E +KGY YG +VP + + A+K K +++ +GF + + + V + +
Sbjct: 287 RKEDLLKGYHYGRSLVPCAREDVGAMKIKGPRAMDAVGFVPIQQVPAYVLLGGVKVIMPL 346
Query: 333 PGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNV 392
+ A ++ RA+ N+ IVR V R V+G+ P+ +E+ D +F+
Sbjct: 347 ADDMVGAKAFRSIVRAIAADNRAMIVRFV-RTRDADPVLGLCVPSTNER---RDVLFFSP 402
Query: 393 LPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPAL 452
LP+AEDVR F+F + + + E A L +++ GK +L+P T NP +
Sbjct: 403 LPYAEDVRFFEFSDYKGMWGTSSDDGDDGEEARLLAAIVEDMTVGKS-VLRPRETFNPVI 461
Query: 453 ERFYHHLELK-----------SEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQ 501
+++Y L K L + +L AI+A
Sbjct: 462 QQYYATLRAKLRLFCDGRGAVGGKGSCGAGELRGEKNGEKNTNGEVLLPLVGAIEATSAA 521
Query: 502 FVIKEN----------PKLKKSTRRFL----REK-------------PSGSDEPNGDGSV 534
F + N KL+ R F+ RE P+ S + D S
Sbjct: 522 FGVPGNQLESVLSSVREKLEACARSFVYVSNRENCVAEERQPYRFCSPAASHDV--DASD 579
Query: 535 SDAQAVNSMESKPVVT-VDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLEN 593
+ +A +++ + +++ +I + P+ F+A++ R+ + V A++ + + +F LL
Sbjct: 580 ASTRAPSTVATPCIISGASQITTVDPVYSFKAIVQAREGVN-VRLAMDKLGDIVFKLLRC 638
Query: 594 SNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFF-DFLMSKKLS 652
S Y K E ++ LR+ C+ E E FND L K+ + R+ + +F+ + +M++ ++
Sbjct: 639 SLGDAQYAKCTECVLVLRQHCVREGEAAYFNDFLLKLMLMARELDHESFWKNGIMARGIA 698
Query: 653 LISKSEAVDSDITDDEAG 670
I+K E +S + D+EA
Sbjct: 699 PITKRECPNSTMDDEEAA 716
>gi|119498147|ref|XP_001265831.1| Ku family DNA helicase, putative [Neosartorya fischeri NRRL 181]
gi|119413995|gb|EAW23934.1| Ku family DNA helicase, putative [Neosartorya fischeri NRRL 181]
Length = 718
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 166/730 (22%), Positives = 307/730 (42%), Gaps = 88/730 (12%)
Query: 5 REALLLLLDVSPSMHS-----VLPDVE----KLCSRLIQKKLIYGKNHEVGVILFGTEET 55
+EA + ++DV SM + D+E + R+ K +GVI T+ET
Sbjct: 4 KEATVYIVDVGKSMGEKRNGRSMTDLEWAMQYVWDRITATVATGRKTATIGVIGLKTDET 63
Query: 56 ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDYM--------LIKKYG 105
NEL + ++H+ VL +I+ ++ L L P T GD + +I Y
Sbjct: 64 SNELDDD-PHFKHISVLSEIQQFLMPDIRRLDALIKPSKTDKGDAISAIILAIQMIVTYC 122
Query: 106 ETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHM 165
+ K K+ + L+T+ + + D+ ++ +V G + G+
Sbjct: 123 KKLKYKRKIVLVTNGQGWMSNEDLDQITKKIKEDNIDLVVLGTDFDDPEYGFKEEGKDPR 182
Query: 166 RVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSE------K 219
+ EN+ LL + ++ S + + + V F+G L+L
Sbjct: 183 KA--ENEALLRGLVEDCDGAYGTLEQAISEMDIPRAKKVRTVATFKGFLQLGNPEEYDTA 240
Query: 220 MKIKVWVYKKTGEEKFPTLKKY---SDKAPSTDKFATHE----------VKVDYEYKSVE 266
++I V Y +T K P+ + SD ++ + E + ++ E
Sbjct: 241 LRIPVERYYRTYVAKPPSASSFVLRSDVGAEEEQGESSEPPKSPPEGGALTSVRNLRTYE 300
Query: 267 DPSKVVPP-------EQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILR 319
P + P E+ KGY YG V IS + + +++L+GF R
Sbjct: 301 VPDENAPGGKIDVEREELAKGYEYGRTAVHISETDENITTLETYAALELVGFIQTDKYDR 360
Query: 320 HYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVS 379
+ +M N+ I + GN +A++A+S+ A+ E+ A+ R V ++ + V+V +L P++
Sbjct: 361 YMHMSTTNIIIGQRGNDKASLALSSFIHALFELECYAVARLVVKENKPPVMV-LLAPSIE 419
Query: 380 EKINIPD--SFYFNVLPFAEDVREFQFPSFSK-FPVSWQ--------PNEQQQEAADNLV 428
PD LPFAEDVR ++FP K VS + PN+ +A V
Sbjct: 420 -----PDYECLIEVQLPFAEDVRTYRFPPLDKVITVSGKVVTEHRNLPNKDLLDAMSEYV 474
Query: 429 KMLDLAPSGKG----EILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPD 484
++L + + E L + + +P L R + ++ H D PP +L K+++P
Sbjct: 475 DSMELVDTDEDGNPVEGLPIDDSFSPVLHRIDSAIRYRAIHPDDPVPPPSKNLTKLSQPP 534
Query: 485 PTLLAESQSAIDAFCGQFVIKE-NPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNSM 543
L+ +S++ + +K+ PK+K R EKP S D A+
Sbjct: 535 QDLVEKSKAYLQKLMEVADVKKVPPKVKGRKRVRESEKPL---------SGLDVDALLHQ 585
Query: 544 ESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKA 603
E + +I I +F+ +++ + + + A++ M + I ++NS NY +
Sbjct: 586 EKRA-----RISPTNAIPEFKQTLTQAETIETIKDAVKQMTSIIEDQIKNSLGDANYDRV 640
Query: 604 VELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFS----TFFDFLMSKKLSLISKSEA 659
+E + +R+ + +EP +ND L ++ K + L KL LIS+ E+
Sbjct: 641 IEEMGVMREELVSFEEPALYNDFLRQLKDNLLKEELGGDRRELWWLLRRNKLGLISQCES 700
Query: 660 VDSDITDDEA 669
SD+T+++A
Sbjct: 701 DQSDVTEEQA 710
>gi|116192145|ref|XP_001221885.1| hypothetical protein CHGG_05790 [Chaetomium globosum CBS 148.51]
gi|121786374|sp|Q2H6C5.1|KU80_CHAGB RecName: Full=ATP-dependent DNA helicase II subunit 2; AltName:
Full=ATP-dependent DNA helicase II subunit Ku80
gi|88181703|gb|EAQ89171.1| hypothetical protein CHGG_05790 [Chaetomium globosum CBS 148.51]
Length = 736
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 163/708 (23%), Positives = 296/708 (41%), Gaps = 101/708 (14%)
Query: 41 KNHEVGVILFGTEETENELTKE-VGGYEHVKVLQDIKVVDGHLVQSLKHLPQG--TCAGD 97
K +GV+ TEET N E + GYEH+ VLQDI + ++ L+ Q T GD
Sbjct: 49 KTWTLGVVGLNTEETNNAQDSEGLEGYEHISVLQDIGPMTMTQLRELRSSIQTSHTYGGD 108
Query: 98 YM--------LIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLR 149
+ +I+ + + K + + L+T+ P+ D ++++ +++ G+
Sbjct: 109 AISGIVVALAMIELFTKKLKYNRRIILVTNGESPIDDESSEDVANRLNYSNIELIVIGVD 168
Query: 150 MKNIVV--------RASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKT 201
+ + E +R ++E N + + + + L + +
Sbjct: 169 FDDADYGFKEEDKSKGKARNEKTLRKLVEQCNNGVFGTMQQAVEELAIP---------RI 219
Query: 202 RDISPVTIFRGDLELSE------KMKIKVWVYKKTGEEKFP-----TLKKYSDKAPSTDK 250
+ + P + G L L + + I V Y KT P + A ++
Sbjct: 220 KPVRPFKAYDGALTLGDPEKYKSALSIHVERYFKTKRAPAPPASTVVVNSEPGGASQSET 279
Query: 251 FATHEVKVDYEYKSVE--------DPS-----KVVPPEQRIKGYRYGPQVVPISSAEWEA 297
D E+ V+ DP + V E KGY+YG VVP S +++
Sbjct: 280 LNEDTEMGDAEFSGVKHMRTYRVNDPDAPGGKRDVEFEDLAKGYQYGRTVVPFSESDFSI 339
Query: 298 VKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAI 357
K + +KS +LGF S+ + + + +A+ N A + +SAL A+ E+ A+
Sbjct: 340 TKLETKKSFTILGFIPFSSYNPFLNLGETGIVVAQKHNEEAELGLSALIHALHELESYAV 399
Query: 358 VRCVWRQGQQSVVVGVLTPNVSEKINIPDSF---YFNVLPFAEDVREFQFPSFSK-FPVS 413
R V + G Q +V +L PN + I D F Y LPFAED+R +QFP K V+
Sbjct: 400 ARYVQKDGAQPQLV-LLKPNPA----IEDDFECLYDVPLPFAEDLRSYQFPPLDKVLTVT 454
Query: 414 WQ--------PNEQQQEAADNLVKMLDLAPSGKGEILQP-ELTP-----NPALERFYHHL 459
P+E ++A + V +DL+ E +P E P NP + R +
Sbjct: 455 GNIIKEHRLLPSEDLKQAMSDFVDAMDLSGFDVDEDGKPTEYAPIDETYNPTIHRMNQAI 514
Query: 460 ELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLR 519
++ DA P + L + ++P L+ +++ I+A IK+ P K+ R R
Sbjct: 515 RARAVDPDAPIKPPAEILLRFSKPPEKLIEKAKPEIEALIDAAEIKKVP--AKAQGRGSR 572
Query: 520 EKP----SGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDW 575
++P SG D ++S+ + T + + P +F+ +++
Sbjct: 573 KEPVKPLSGLD-------------IDSLLGESKRTTISLDNAVP--EFKQILATAADDAT 617
Query: 576 VDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICR 635
++ A + M + L+++S + Y +A E L +R+ I + P +N L + K
Sbjct: 618 IESAAKQMGQIVRKLIQDSFADLFYARAAENLRVMREELISLEVPGLYNKFLTGLKKSIL 677
Query: 636 KRNFS-----TFFDFLMSKKLSLISKSEAVDSDITDDEAGSFIVKSQP 678
+F ++ LSLI++ E+ S++T +EA + S+P
Sbjct: 678 SGELDGDRREMWFKHIVGGHLSLITQDESEVSEVTAEEAKALCAWSRP 725
>gi|302406464|ref|XP_003001068.1| Ku80 [Verticillium albo-atrum VaMs.102]
gi|261360326|gb|EEY22754.1| Ku80 [Verticillium albo-atrum VaMs.102]
Length = 722
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 158/692 (22%), Positives = 297/692 (42%), Gaps = 80/692 (11%)
Query: 41 KNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDY 98
K +GV+ T+ET + L E GYE++ +LQ+I + H ++ L+ + P T GD
Sbjct: 49 KTWTIGVVGLKTDETRHLLQDE-EGYENISILQEIGPMSMHSLKELQDVIVPSETHTGDA 107
Query: 99 M--------LIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRM 150
+ +++KY + K + + LITD P+ D +++ +++ G+
Sbjct: 108 VSAIVIAVDMMEKYTKALKYARKIYLITDGTGPIDGDDFEDITKKINQDGIELIVLGVDF 167
Query: 151 KNIVVRASLSGEPHMRVIIENDNLL-NIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTI 209
+ +P ++ +N+ LL ++ SK A+ + + + + P
Sbjct: 168 DDAEYGFKEEDKPSLKA--KNERLLKDLVSKCKDAQLATIAEAIDELDTPRLKPVRPYKS 225
Query: 210 FRGDLELSE--------KMKIKVWVYKKTGEEKFP---TLKKYSD----KAPSTDKFATH 254
+ G L L + M I V Y KT + P T+ +D +AP +
Sbjct: 226 YDGPLTLGDVKDPKHPSPMVINVERYFKTKLARPPPASTVVLRTDPGPSQAPEGEGMEGI 285
Query: 255 EVKVDY-------EYKSVEDPS-----KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKP 302
E +++ YK V DP + V + KGY YG V IS +EW K +
Sbjct: 286 ESSLNFGAIRQARSYK-VNDPDAPGGKRDVEFDSLAKGYEYGRTAVHISESEWNMTKIET 344
Query: 303 EKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVW 362
K+ +++GF A M + + ++ + ++ +A+S+L A+ E++ A+ R V
Sbjct: 345 NKAFEIVGFIPADKFEPFLSMGESCITVSRKHDDKSQLALSSLIHALYELSSYAVARIVL 404
Query: 363 RQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK-FPVSWQ------ 415
+ G++ ++ +L P + + + Y LPFAEDVR +QFP + VS Q
Sbjct: 405 KDGKEPQLI-LLAPGIEPDL---ECLYDVPLPFAEDVRSYQFPPLDRVVTVSGQTLTKHR 460
Query: 416 --PNEQQQEAADNLVKMLDLAPSGKGEI-LQP-ELTP-----NPALERFYHHLELKSEHQ 466
P+++ +A + V +DL K E +P E P NPA+ R + ++
Sbjct: 461 LIPDDELNDAMSDFVDAMDLDTFVKDEDGGEPTEYAPIDESFNPAIHRINQVVRDRAIKP 520
Query: 467 DAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKP-SGS 525
P+ L + EP LL ++++ + A +K+ P K+ R KP SG
Sbjct: 521 TGDIEPIPRVLLRYAEPPEDLLTKAKADMKALIKAAEVKKVPPKAKNKRNRDAAKPLSGL 580
Query: 526 DEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKN 585
D GS+ + S ++ + +F+ ++ +++A M
Sbjct: 581 DIDALLGSLPKRARLVSRDNA-------------VPEFKQALTSATDIAAIEEAASQMGE 627
Query: 586 KIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFST---- 641
I GL+ +S Y +A+E L +R I +EP +N+ ++ F
Sbjct: 628 VIRGLVTDSFGDAEYNRAIEALGVMRTELINMEEPAMYNNFIKDFKTRLLAGEFGGDRRE 687
Query: 642 FFDFLMSKKLSLISKSEAVDSDITDDEAGSFI 673
+ + + +L LI +++ S++T ++A F+
Sbjct: 688 MWWRVRTGRLGLIDSAQSEVSEVTSEQATEFL 719
>gi|35038|emb|CAA40736.1| nuclear factor IV [Homo sapiens]
Length = 628
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 109/471 (23%), Positives = 216/471 (45%), Gaps = 27/471 (5%)
Query: 214 LELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVP 273
L + + I++ YK +E+ D +++ + Y +D V
Sbjct: 147 LTIGSNLSIRIAAYKSILQERVKKTWTVVD----AKTLKKEDIQKETVYCLNDDDETEVL 202
Query: 274 PEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNILRHYYMKDVNL-FIA 331
E I+G+ YG +VP S + E +K+K E K +LGF +S + R ++M + L A
Sbjct: 203 KEDIIQGFLYGSDIVPFSKVDEEQMKYKSEGKCFSVLGFCKSSQVQRRFFMGNQVLKVFA 262
Query: 332 EPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFN 391
+ A VA+S+L A+ +++ VAIVR + + + + VGV P++ + +
Sbjct: 263 ARDDEAAAVALSSLIHALDDLDMVAIVRYAYDK-RANPQVGVAFPHIKHNY---ECLVYV 318
Query: 392 VLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKG-----EILQPEL 446
LPF ED+R++ F S K + P E Q A D L+ + LA + ++
Sbjct: 319 QLPFMEDLRQYMFSSL-KNSKKYAPTEAQLNAVDALIDSMSLAKKDEKTDTLEDLFPTTK 377
Query: 447 TPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKE 506
PNP +R + L ++ H PP+ + + P + +SQ + F + E
Sbjct: 378 IPNPRFQRLFQCLLHRALHPREPLPPIQQHIWNMLNPPAEVTTKSQIPLSKIKTLFPLIE 437
Query: 507 NPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVN-SMESKPVVTVDKIGDLTPIQDFEA 565
K + T + + + + D P ++ + S+ S +V +G + P ++F
Sbjct: 438 AKKKDQVTAQEIFQD-NHEDGPTAKKLKTEQGGAHFSVSSLAEGSVTSVGSVNPAENFRV 496
Query: 566 MMSRRDCPDWVDKAIEDMKNKIFGLLE---NSNEGINYPKAVELLVALRKGCILEQEPKQ 622
++ ++ + E+ N++ +E ++NE + K+++ + A R+ I E ++
Sbjct: 497 LVKQKKA------SFEEASNQLINHIEQFLDTNETPYFMKSIDCIRAFREEAIKFSEEQR 550
Query: 623 FNDVLEKVCKICRKRNFSTFFDFLMSKKLSLISKSEAVDSDITDDEAGSFI 673
FN+ L+ + + + + F++ ++ ++LI+K EA S +T +EA F+
Sbjct: 551 FNNFLKALQEKVEIKQLNHFWEIVVQDGITLITKEEASGSSVTAEEAKKFL 601
>gi|452824587|gb|EME31589.1| ATP-dependent DNA helicase 2 subunit 2 isoform 2 [Galdieria
sulphuraria]
Length = 656
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 155/663 (23%), Positives = 285/663 (42%), Gaps = 65/663 (9%)
Query: 6 EALLLLLDVSPSMHS-VLPDVEKLCSRLIQKKLIYGKNHEV-GVILFGTEETENELTKEV 63
EA++L+ D+ ++ + L ++++ + L YG ++ G++ G+ E +N L +
Sbjct: 3 EAIVLVCDIGCTLDAQSLDQLKQVSIAFFLRCLTYGSWRQLFGLVFMGSREPDNHLHNLL 62
Query: 64 GGYEHVKVL-----QDIKVV----DGHLVQSLKHLPQGTCAGDYMLIKKYGETYKGKKHL 114
GGY H+K + DI +V L L C +LI + K + +
Sbjct: 63 GGYTHIKTVVVPERPDISLVKYFYQCQLQGGLSDYIDAICVSSDLLISAVNKK-KLQPRI 121
Query: 115 CLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNL 174
LITD K T+ QV I + +R+ I + L + V I N L
Sbjct: 122 VLITDG----KAEQFFTQ--QVEEILPALKERSIRLDVIGIDDFLEDKMSHSVQISNAAL 175
Query: 175 LNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEK 234
L + L + + S T + G L++S ++ V +Y + K
Sbjct: 176 LCRLTDSLDGTALSFKVSMEQLSEPIVKPFSLRTNYSGMLQIS-SVQFPVRLYTYCRDFK 234
Query: 235 FPTLKK--YSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISS 292
PT + +S+ S + VK + + ED + + PE+ I+G+ YG ++P+S
Sbjct: 235 PPTGNRIFWSESMESGKQVLC--VKETHYFSVQED--RELEPEEMIEGHFYGRSLIPVSP 290
Query: 293 AEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEM 352
+ A+ + K +K+LGF + +H M V++ I +P + + +L AM EM
Sbjct: 291 FDLPALSYGAPKCLKVLGFFAKKDFSQHILMSGVDVMIPDPNDEISITYFVSLTEAMLEM 350
Query: 353 NKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPV 412
++VA+ R V R+ S + ++ P++ + + LP ED+R FPS +
Sbjct: 351 DRVALCRYV-RRDNTSPALMLMWPHLKSDGIL--CLFLCQLPVLEDIRNHTFPSLHS--L 405
Query: 413 SWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLEL---------KS 463
+ + +Q EA N + L + + + + +YH L ++
Sbjct: 406 ADNVDMEQVEAIRNWIASRQLKDTFQ----------STKVFHYYHQRLLQCLQDRAIYQT 455
Query: 464 EHQD--AAPPPLDDSLKKITEPDPTLLAESQS-AIDAFCGQFVIKENPKLKKSTRRFLRE 520
H D ++ PPL L+++ E L S + F +++ K K+ +R +
Sbjct: 456 LHNDEKSSLPPLSPYLERVLENTNFLTCGRDSESTKQLWKYFPLRKVDKPKRRKQRTM-N 514
Query: 521 KPSGSD-------EPNGDGSVSDAQAVNSMESKPVVTV----DKIGDLTPIQDFEAMMSR 569
PS + PN V+++ + E T+ K+G+ TP+ DFE M+S
Sbjct: 515 MPSPHEISIEPYLPPNAWSDVNESFEEYTKEEPIEETIFAEKSKVGEATPVADFENMLSN 574
Query: 570 RDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEK 629
+ DW+D+A++ M++ I L + K + L A RK CI+E E ++N +L
Sbjct: 575 KR-HDWLDEAMKQMQDIIERLFSEELDQQRDDKIIHCLTAFRKRCIMEGEELRYNRLLSD 633
Query: 630 VCK 632
+ +
Sbjct: 634 IIR 636
>gi|452824588|gb|EME31590.1| ATP-dependent DNA helicase 2 subunit 2 isoform 1 [Galdieria
sulphuraria]
Length = 691
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 160/669 (23%), Positives = 288/669 (43%), Gaps = 68/669 (10%)
Query: 6 EALLLLLDVSPSMHS-VLPDVEKLCSRLIQKKLIYGKNHEV-GVILFGTEETENELTKEV 63
EA++L+ D+ ++ + L ++++ + L YG ++ G++ G+ E +N L +
Sbjct: 3 EAIVLVCDIGCTLDAQSLDQLKQVSIAFFLRCLTYGSWRQLFGLVFMGSREPDNHLHNLL 62
Query: 64 GGYEHVKVL-----QDIKVV----DGHLVQSLKHLPQGTCAGDYMLIKKYGETYKGKKHL 114
GGY H+K + DI +V L L C +LI + K + +
Sbjct: 63 GGYTHIKTVVVPERPDISLVKYFYQCQLQGGLSDYIDAICVSSDLLISAVNKK-KLQPRI 121
Query: 115 CLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNL 174
LITD K T+ QV I + +R+ I + L + V I N L
Sbjct: 122 VLITDG----KAEQFFTQ--QVEEILPALKERSIRLDVIGIDDFLEDKMSHSVQISNAAL 175
Query: 175 LNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEK 234
L + L + + S T + G L++S ++ V +Y + K
Sbjct: 176 LCRLTDSLDGTALSFKVSMEQLSEPIVKPFSLRTNYSGMLQIS-SVQFPVRLYTYCRDFK 234
Query: 235 FPTLKK--YSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISS 292
PT + +S+ S + VK + + ED + + PE+ I+G+ YG ++P+S
Sbjct: 235 PPTGNRIFWSESMESGKQVLC--VKETHYFSVQED--RELEPEEMIEGHFYGRSLIPVSP 290
Query: 293 AEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEM 352
+ A+ + K +K+LGF + +H M V++ I +P + + +L AM EM
Sbjct: 291 FDLPALSYGAPKCLKVLGFFAKKDFSQHILMSGVDVMIPDPNDEISITYFVSLTEAMLEM 350
Query: 353 NKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPV 412
++VA+ R V R+ S + ++ P++ K + + LP ED+R FPS +
Sbjct: 351 DRVALCRYV-RRDNTSPALMLMWPHL--KSDGILCLFLCQLPVLEDIRNHTFPSLHS--L 405
Query: 413 SWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLEL---------KS 463
+ + +Q EA N + L + + + + +YH L ++
Sbjct: 406 ADNVDMEQVEAIRNWIASRQLKDTFQ----------STKVFHYYHQRLLQCLQDRAIYQT 455
Query: 464 EHQD--AAPPPLDDSLKKITEPDPTLLAESQS-AIDAFCGQFVIKENPKLKKSTRRFLRE 520
H D ++ PPL L+++ E L S + F +++ K K+ +R +
Sbjct: 456 LHNDEKSSLPPLSPYLERVLENTNFLTCGRDSESTKQLWKYFPLRKVDKPKRRKQRTM-N 514
Query: 521 KPSGSD-------EPNGDGSVSDAQAVNSMESKPVVTV----DKIGDLTPIQDFEAMMSR 569
PS + PN V+++ + E T+ K+G+ TP+ DFE M+S
Sbjct: 515 MPSPHEISIEPYLPPNAWSDVNESFEEYTKEEPIEETIFAEKSKVGEATPVADFENMLSN 574
Query: 570 RDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEK 629
+ DW+D+A++ M++ I L + K + L A RK CI+E E ++N +L
Sbjct: 575 KR-HDWLDEAMKQMQDIIERLFSEELDQQRDDKIIHCLTAFRKRCIMEGEELRYNRLLS- 632
Query: 630 VCKICRKRN 638
I RK N
Sbjct: 633 --DIIRKAN 639
>gi|326670851|ref|XP_002665537.2| PREDICTED: x-ray repair cross-complementing protein 5-like [Danio
rerio]
Length = 832
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 122/469 (26%), Positives = 208/469 (44%), Gaps = 25/469 (5%)
Query: 214 LELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVP 273
L + + I++ YK EEK K S +VK + Y +D V
Sbjct: 353 LTIGSSLSIRIVGYKAVTEEKV----KKSWTIVDAQSHQRDDVKRETVYCLNDDDETEVQ 408
Query: 274 PEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNILRHYYMKDVNLFIAE 332
+ I+GYRYG +VP S + E +K+K + K +LGFT I RH +M + +
Sbjct: 409 KDDTIQGYRYGSDIVPFSKVDEEQMKYKHDGKCFSVLGFTKQELIPRHQFMGSQVVKVFA 468
Query: 333 P-GNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFN 391
P + A VA+S+L RA+ + AIVR + + + + VG P + +K + +
Sbjct: 469 PRDDEHAAVALSSLIRALDGLKMAAIVRYAYDR-RSNPQVGAAFPCIKKKY---ECLLYV 524
Query: 392 VLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKG----EILQPELT 447
LP+ ED+R+F FP + P+ Q A D L+ + L + EI +
Sbjct: 525 QLPYMEDLRQFTFPMLENNK-KFMPSGSQLSAVDALIDSMMLMEKDENGESVEIFKVNHI 583
Query: 448 PNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKEN 507
PNP +R + L + + D PP+D LK++ E + A Q+ + F +K
Sbjct: 584 PNPQFQRLFQCLHHRGVNPDDPLPPVDPWLKRVLERPQAVSARCQAPLRDVKTSFPLKVV 643
Query: 508 P---KLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFE 564
+ K S F S +DEP+ + + ++ + +G + P +DF
Sbjct: 644 VKKKEQKTSADVF----GSSADEPDAKKVKVNEETEFNLAEITEGNITSVGSVNPARDFC 699
Query: 565 AMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFN 624
++ ++ D+A + + ++I LL N + Y K++ + A R +L + FN
Sbjct: 700 TLIRQKTVS--FDQACQQLTHRIEQLLGNRSTEY-YTKSIACIQAFRDQSVLSGNAELFN 756
Query: 625 DVLEKVCKICRKRNFSTFFDFLMSKKLSLISKSEAVDSDITDDEAGSFI 673
L+ + + R+ F++ L L+LISK E S I+ EA F+
Sbjct: 757 SYLQSLKRSIADRSLQDFWNLLAQDALTLISKDEVEASTISKQEANQFL 805
>gi|358391859|gb|EHK41263.1| hypothetical protein TRIATDRAFT_295201 [Trichoderma atroviride IMI
206040]
Length = 689
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 157/670 (23%), Positives = 291/670 (43%), Gaps = 79/670 (11%)
Query: 45 VGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSL--KHLPQGTCAGDYM--- 99
VGV+ T+ET + L ++ GY+H+ +LQ + + +++L K P T GD +
Sbjct: 53 VGVVGLRTDETSHTLAED--GYDHISILQPLGPMSMSGLKTLQPKIQPSKTTEGDAISAI 110
Query: 100 -----LIKKYGETYKGKKHLCLITDAL-CPLKDPDVGTKEDQVSTIARQMVAFGLRMKNI 153
+I + + K K+ +CL+TD L PD G KE+ + +Q +K +
Sbjct: 111 VIAVDMIDTFTKKNKWKRQICLVTDVLGVDFDAPDYGYKEEDKPAVKKQNEE---TLKKL 167
Query: 154 VVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRG- 212
V + I+E + +N KS D + +L + + V + R
Sbjct: 168 V--DGCGEDARFASIVEAIDDMNEPRAKSVKPYKTYDGSLTLGDPKNAPAVVEVRVERYF 225
Query: 213 DLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPS--- 269
L+ + V K+ E+ P+ ++ + A VK YK V DP
Sbjct: 226 KTHLARPVTASTVVVKE--EQAGPSQAADDEQMEGVELTA---VKQSRTYK-VNDPDAPG 279
Query: 270 --KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN 327
+ V E KGY YG V IS ++ K + +KS K++GF + +
Sbjct: 280 GKRDVEFESLAKGYEYGRTAVHISESDHNVTKLQTQKSFKIIGFIPKEKYEPLLNLGESC 339
Query: 328 LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGV---LTPNVSEKINI 384
+ IA + ++ +A S+L A+ E++ A+ R V + + ++V + L PN + ++
Sbjct: 340 VTIAAKYDEKSELAFSSLVWALSELDSYAVARLVTKDEKDPIMVLLMPYLEPNYACLYDV 399
Query: 385 PDSFYFNVLPFAEDVREFQFPSFSK-FPVSWQ--------PNEQQQEAADNLVKMLDLAP 435
P LPFAEDVR +QFP + +S Q P+++ +A + V +D++
Sbjct: 400 P-------LPFAEDVRSYQFPPLDRVVTISGQTITKHRLLPSDELSQAMSDYVDAMDISN 452
Query: 436 SGKGEILQP------ELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLA 489
G + +P + NPA+ R H ++ ++ H + P + L + P L+
Sbjct: 453 YGIDQDGEPAEYATIDEIYNPAIHRINHAIKQRAVHPERPVPEIPPVLLRFAAPPTELVE 512
Query: 490 ESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNSMESKPVV 549
Q+ ID+ +K+ P K R+ KP ++ ++ ++
Sbjct: 513 TVQATIDSLIKAADVKKVPPKAKGKRQREAVKP-----------------ISGLDVDALL 555
Query: 550 TVDKIGDLTP---IQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVEL 606
+K G ++P I DF+ ++ + + + A + M + L+ +S Y +A+E
Sbjct: 556 GGEKKGSISPENAIPDFKRALNSSEEVEQIADATKQMGAIVQSLITDSFGDNKYAQAMES 615
Query: 607 LVALRKGCILEQEPKQFN----DVLEKVCKICRKRNFSTFFDFLMSKKLSLISKSEAVDS 662
+ +R+ I +EP Q+N D+ +K+ + F+ + KL LI +S++ S
Sbjct: 616 IGVMREELINLEEPGQYNEFVRDLKKKLLSGTLGGDRRDFWFKMRWAKLGLIIQSQSEAS 675
Query: 663 DITDDEAGSF 672
+T +EA F
Sbjct: 676 TVTLEEADEF 685
>gi|398399317|ref|XP_003853086.1| hypothetical protein MYCGRDRAFT_40048 [Zymoseptoria tritici IPO323]
gi|339472968|gb|EGP88062.1| hypothetical protein MYCGRDRAFT_40048 [Zymoseptoria tritici IPO323]
Length = 726
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 160/688 (23%), Positives = 297/688 (43%), Gaps = 77/688 (11%)
Query: 45 VGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGD------- 97
GVI T+ET+N L E Y H+K+L I + V+ L++ + + G+
Sbjct: 53 AGVIGLRTDETDNPLGDE-DEYHHIKILHPISQIVMSDVRKLRNDLKLSKTGEGDATSAL 111
Query: 98 YMLIKKYGETYKGKKHL---CLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV 154
+ I+ ET K K+L L+TDA + D+ +++ + + ++V G+ +
Sbjct: 112 VVAIQMITETCKQLKYLRKIVLVTDARANMITDDLSHITEKIKSDSIELVVLGVDFDD-- 169
Query: 155 VRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLF---VDSTTSLRGARKTRDISPVTIFR 211
E + E++ +L + K LF ++ L+ R T+ + P ++
Sbjct: 170 AEYGFKEENKDPLKKEHEAVLKTLC--ADGKGLFGTIAEAIDELQTPR-TKSVRPTPSYK 226
Query: 212 GDLELS------EKMKIKVWVYKKTGEEKFPTLKKY------SDKAPST----------- 248
G L L + M I + Y K P+ K+ + ST
Sbjct: 227 GFLTLGNVELHDDAMIIDIERYPKVMVAAAPSASKFVVRSGGHEATQSTLVGGENGTQDG 286
Query: 249 -DKFATHEVKVDYEYKSVEDPS--KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKS 305
D A Y+ P + + E+ KGY YG V IS ++ F+ ++S
Sbjct: 287 GDGLAAIHNARTYQVDDENAPGGKRDLDREELSKGYEYGRTAVHISESDQNVTTFETKQS 346
Query: 306 VKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQG 365
+ ++GF D + R+ + + +++ N +A++A+S+ A+ E AI R V ++
Sbjct: 347 LDIVGFVDKNQYQRYLDLSKACMIVSQKNNDKASMALSSFIHALHECESYAIARYVRKEN 406
Query: 366 QQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK-FPVSWQ--------P 416
+ ++ +L PN + + Y LPFAED+R ++FP + VS + P
Sbjct: 407 SEPRML-LLCPNAEPEF---ECLYDVELPFAEDLRSYKFPPLDRVLTVSGKEIKAHRNLP 462
Query: 417 NEQQQEAADNLVKMLDLA---PSGKG---EILQPELTPNPALERFYHHLELKSEHQDAAP 470
++ EA + V +DL+ P +G E + T NP L R + ++ ++ +A P
Sbjct: 463 SDDLLEAMSDYVDKMDLSKLVPQEEGDPTEYAPMDETYNPHLHRLHQVIKHRAVFPEADP 522
Query: 471 PPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNG 530
PP + L K + P +L +S+ A+D + +K+ P K +R R+ PS
Sbjct: 523 PPPYEILGKYSHPPEEVLTKSKPALDHLLAKAEVKKVPP-KAKGKRGNRKPPS------- 574
Query: 531 DGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGL 590
+S+ + P +I + +F+ M+ D D + A + +K I
Sbjct: 575 -APLSNLDVAALLAQDPKRKSRRIDPKNAVAEFKQMLESTDDIDEMKNAFKQLKFIILDE 633
Query: 591 LENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVC-KICRKR---NFSTFFDFL 646
+++S Y +A+E + +R+ + +EP +ND L ++ KI K + + +
Sbjct: 634 IKHSVGENKYGQALENIYVMREQAVEFEEPGLYNDFLHELKDKIFGKELGGDRGAMWYRV 693
Query: 647 MSKKLSLISKSEAVDSDITDDEAGSFIV 674
K LI K EA S++T +E F++
Sbjct: 694 RRDKQGLILKEEASTSEVTVEENKKFMM 721
>gi|133777834|gb|AAI15209.1| Xrcc5 protein [Danio rerio]
Length = 727
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 123/469 (26%), Positives = 208/469 (44%), Gaps = 25/469 (5%)
Query: 214 LELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVP 273
L + + I++ YK EEK K S +VK + Y +D V
Sbjct: 248 LTIGSSLSIRIVGYKAVTEEKV----KKSWTIVDAQSHQRDDVKRETVYCLNDDDETEVQ 303
Query: 274 PEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNILRHYYMKDVNLFIAE 332
+ I+GYRYG +VP S + E +K+K + K +LGFT I RH +M + +
Sbjct: 304 KDDTIQGYRYGSDIVPFSKVDEEQMKYKHDGKCFSVLGFTKQELIPRHQFMGSQVVKVFA 363
Query: 333 P-GNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFN 391
P + A VA+S+L RA+ + AIVR + + + + VG P + +K + +
Sbjct: 364 PRDDEHAAVALSSLIRALDGLKMAAIVRYAYDR-RSNPQVGAAFPCIKKKY---ECLLYV 419
Query: 392 VLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV-KMLDLAPSGKGE---ILQPELT 447
LP+ ED+R+F FP + P+ Q A D L+ M+ + GE I +
Sbjct: 420 QLPYMEDLRQFTFPMLENNK-KFMPSGSQLSAVDALIDSMMLMEKDENGESMDIFKVNHI 478
Query: 448 PNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKEN 507
PNP +R + L + + D PP+D LK++ E + A Q+ + F +K
Sbjct: 479 PNPQFQRLFQCLHHRGVNPDDPLPPVDPWLKRVLERPQAVSARCQAPLRDVKTSFPLKVV 538
Query: 508 P---KLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFE 564
+ K S F S +DEP+ + + ++ + +G + P +DF
Sbjct: 539 VKKKEQKTSADVF----GSSADEPDAKKVKVNEETEFNLAEITEGNITSVGSVNPARDFC 594
Query: 565 AMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFN 624
++ ++ D+A + + ++I LL N + Y K++ + A R +L + FN
Sbjct: 595 TLIRQKTVS--FDQACQQLTHRIEQLLGNRSTEY-YTKSIACIQAFRDQSVLSGNAELFN 651
Query: 625 DVLEKVCKICRKRNFSTFFDFLMSKKLSLISKSEAVDSDITDDEAGSFI 673
L+ + + R+ F++ L L LISK E S I+ EA F+
Sbjct: 652 SYLQSLKRSIADRSLQDFWNLLAQDALKLISKDEVEASTISKQEANQFL 700
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 82/165 (49%), Gaps = 18/165 (10%)
Query: 1 MART-REALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGT 52
MAR + AL+L +DV SM + P E K+ + +Q+++ E+G++LFGT
Sbjct: 1 MARAAKSALVLCMDVGFSMSNSGPGQEPPFEQAKKVIQKFVQRQVFAENKDEIGLVLFGT 60
Query: 53 EETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDYM-----LIKKYGE 106
+ T+N L + G YE++ V + + + D L++ ++ Q G D++ +
Sbjct: 61 DGTKNPLAND-GQYENITVHRHLMIPDFELLEEIERELQPGGQQADWLDALVVCMDLLQN 119
Query: 107 TYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMK 151
GKK+ L + L D ++ T EDQ+ I + + G+ ++
Sbjct: 120 ETMGKKYDRL---NIALLTDLNIQTSEDQLDIIIQNLKKAGITLQ 161
>gi|326431135|gb|EGD76705.1| hypothetical protein PTSG_08056 [Salpingoeca sp. ATCC 50818]
Length = 534
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 135/246 (54%), Gaps = 16/246 (6%)
Query: 221 KIKVWVYKKTGEEKFPTLKKYS---DKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQR 277
+I V++Y + E PTLKK S D P+ A E +V Y +K ED ++V P E+R
Sbjct: 200 EIPVFLYTEEKREPRPTLKKLSALVDLDPTDADSAKVEREVTY-HKLDEDETEV-PGEER 257
Query: 278 IKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSR 337
IKGYRYG +VP E + KP+K + ++ FT N+ RH+ ++ + + +
Sbjct: 258 IKGYRYGRTIVPWEKMHEENLTLKPDKELSVICFTHQDNVPRHHQLEPLLCVLPAHDDED 317
Query: 338 ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAE 397
A ++ LA+A+ EM VAIVR V+R + + +G+L P +SE+ Y+ LPF E
Sbjct: 318 AARGIACLAQALHEMESVAIVRYVFR-NKAAPKLGMLFPTISEEYK---GLYYVSLPFRE 373
Query: 398 DVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLA------PSGKGEILQPELTPNPA 451
D+R ++F S +K + +++Q+ A ++++ +DL + E +PE T NPA
Sbjct: 374 DIRPYEFASLAKNK-NADFDKEQRAAVEDVIASMDLMKGYVDEDGDEVEAYEPEYTFNPA 432
Query: 452 LERFYH 457
++ FY
Sbjct: 433 IQMFYQ 438
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 8/78 (10%)
Query: 1 MARTREALLLLLDVSPSMH-------SVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTE 53
M+R+ + ++LDV PSM S L K +Q+K+++ K EV +I FG
Sbjct: 1 MSRSGDLTAIVLDVGPSMSTKLSSGKSHLETAVKAIDLFVQQKVLHTKKDEVALITFGDN 60
Query: 54 ETENELTKEVGGYEHVKV 71
ET+N L + G Y+H+ V
Sbjct: 61 ETDNPLASD-GEYQHICV 77
>gi|407852203|gb|EKG05832.1| KU80 protein, putative [Trypanosoma cruzi]
Length = 744
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 160/738 (21%), Positives = 323/738 (43%), Gaps = 97/738 (13%)
Query: 5 REALLLLLDVS-PSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENE-LTKE 62
R AL+ LD++ PS L + C R + +++ + E+ ++L GT + N +
Sbjct: 4 RSALVFALDLNCPSASLAL--AAEFCRRSAETTMMFAPHDEMALVLAGTCDPHNPPQNGQ 61
Query: 63 VGG--YEHVKVLQDIKVVDGHLVQSLKHL-----PQGTCAGDYM--------LIKKYGET 107
GG ++H+ V + ++ L H+ P D++ ++++
Sbjct: 62 KGGERFKHISVPCALAAPTVEFLEPLAHITPTPPPCERHEVDFLETLFVCDHVLRERTAN 121
Query: 108 YKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQ-------MVAFGLRMKNIVVRASLS 160
++ + LITDA DV K D+++T+ +V G+ V A+
Sbjct: 122 KCYQRVVYLITDA-----HTDVARK-DEMNTLLESFQQHGVSLVVIGIDFTETSVDATDD 175
Query: 161 GE------PHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGAR--KTRDISPVTIFRG 212
E + + +N+ +L++ +++ V +L+ + + R I+ + R
Sbjct: 176 EERDDKSLTDLSLKAQNERVLHVMCSLLGEESMVVSLEEALQEVQELRRRKITQRALLRV 235
Query: 213 DLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVV 272
L + + +++ ++ KT EE+ PT+K+ + EV + ++ + + + +
Sbjct: 236 VLSIGD-VRLATQMFTKTQEERLPTMKRTTANG--------EEVYMKTIFQDLSEDAAPL 286
Query: 273 PPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAE 332
E +KGY YG +VP + + A+K K +++ +GF + + + V + +
Sbjct: 287 RKEDLLKGYHYGRSLVPCAREDVGAMKIKGPRAMDAVGFVPIQQVPAYVLLGGVKVIMPL 346
Query: 333 PGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNV 392
+ A ++ RA+ N+ IVR V R V+G+ P+ +E+ D +F+
Sbjct: 347 ADDMVGAKAFRSIVRAIAADNRAMIVRFV-RTRDTDPVLGLCVPSTNER---RDVLFFSP 402
Query: 393 LPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPAL 452
LP+AEDVR +F + + + +E A L +++ GK +L+P T NP +
Sbjct: 403 LPYAEDVRFLEFSDYKGMWGNSNDDGDDEEEARLLAAIVEEMTVGKS-VLRPRETFNPVI 461
Query: 453 ERFYHHLELK-------SEHQDAAPPPLDDSLK--KITEPDPT--LLAESQSAIDAFCGQ 501
+++Y L K E D L+ K E + +L AI+A
Sbjct: 462 QQYYATLRAKLRLFCDGREGVGGKGSCGADELRGGKNGEKNTNGEVLLPLVGAIEATSAA 521
Query: 502 FVIKEN----------PKLKKSTRRFL----REK-------------PSGSDEPNGDGSV 534
F + N KL+ R F+ RE P+ S + D S
Sbjct: 522 FGVPGNQLESVLSSVREKLEACARSFVYVSNRENCVAEERQSYRFYSPAASHDV--DASD 579
Query: 535 SDAQAVNSMESKPVVT-VDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLEN 593
+ +A +++ + +++ +I + P+ F+A++ R+ + V A++ + + +F LL
Sbjct: 580 TSTRAPSTVATPCIISDASQITTVDPVYSFKAIVQAREGVN-VRLAMDKLGDIVFKLLRC 638
Query: 594 SNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFF-DFLMSKKLS 652
S Y K ++ LR+ C+ E E FND L K+ + R+ + +F+ + +M++ ++
Sbjct: 639 SLGDAQYAKCTGCVLVLRQHCVREGEAAYFNDFLLKLMLMARELDHESFWKNGIMARGIA 698
Query: 653 LISKSEAVDSDITDDEAG 670
I+K E +S + D+EA
Sbjct: 699 PITKRECPNSTMDDEEAA 716
>gi|358378936|gb|EHK16617.1| hypothetical protein TRIVIDRAFT_232258 [Trichoderma virens Gv29-8]
Length = 714
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 161/690 (23%), Positives = 286/690 (41%), Gaps = 94/690 (13%)
Query: 45 VGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL-----PQGTCAGDYM 99
VGV+ F T+ET + L ++ GYE++ +LQ + + + SLK+L P T GD +
Sbjct: 53 VGVVGFRTDETNHTLGED--GYENISILQPLGPM---TMTSLKNLQSKVKPSRTVEGDAI 107
Query: 100 --------LIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMK 151
+I Y + K K+ +CL+TD + D+ ++ ++ G+
Sbjct: 108 SAIVVAVDMIDTYTKKNKWKRQICLVTDGHGEIDPDDIDDISRKICDSNIELTVLGVDFD 167
Query: 152 NIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTR--DISPVTI 209
E V +N+ L + F ++ + R + P
Sbjct: 168 --APDYGFKEEDKSLVKKQNEQTLKRLVDGCGQDSRFASIVEAIDDMNEPRAKSVKPYKT 225
Query: 210 FRGDLELSEK------MKIKVWVYKKTGEEKFPT----LKKYSDKAPS-------TDKFA 252
+ G L L + + I+V Y KT + PT + K PS D
Sbjct: 226 YDGLLTLGDPKNAPAVVDIRVERYFKTHLARPPTASTVVVKEEQAGPSEAADEEQMDGVE 285
Query: 253 THEVKVDYEYKSVEDPS-----KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVK 307
VK YK V DP + V E KGY YG V IS ++ K + +KS K
Sbjct: 286 LTAVKQARTYK-VNDPDAPGGKRDVEFESLAKGYEYGRTAVHISESDHNVTKLETQKSFK 344
Query: 308 LLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQ 367
++GF + + + IA + ++ +A S+L A+ E++ A+ R V + ++
Sbjct: 345 IIGFVQKEKYELLLNLGETCVTIAAKYDEKSELAFSSLVWALSELDSYAVARLVTKDEKE 404
Query: 368 SVVVGV---LTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK-FPVSWQ-------- 415
++V + + PN ++P LPFAED+R +QFP + VS Q
Sbjct: 405 PIMVLLMPHMEPNYVCLYDVP-------LPFAEDIRTYQFPPLDRVVTVSGQTLTSHRLL 457
Query: 416 PNEQQQEAADNLVKMLDLAPSGKGEILQP------ELTPNPALERFYHHLELKSEHQDAA 469
P+++ +A + V +D++ G E +P E NPA+ R H ++ ++ H +
Sbjct: 458 PSDELNQAMSDYVDAMDISTYGIDEEGEPAEYATIEEIYNPAIHRTNHAIKQRAVHPEKP 517
Query: 470 PPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPN 529
P + L + P L+ Q+ ID+ +K+ P K R+ KP
Sbjct: 518 VPEIPPVLLRFAAPPTELVETVQAKIDSLVQAADVKKVPPKAKGKRQRETVKP------- 570
Query: 530 GDGSVSDAQAVNSMESKPVVTVDKIGDLTP---IQDFEAMMSRRDCPDWVDKAIEDMKNK 586
++ ++ ++ +K G ++P I DF+ ++ + + + A + M
Sbjct: 571 ----------ISGLDVDALLGEEKKGSISPENAIPDFKRALNSSEEVEQIADATKQMAAI 620
Query: 587 IFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFST----F 642
+ L+ +S Y +A+E + A+R+ +EP +ND + + K F
Sbjct: 621 VRSLVTDSFGDSKYAQAMEGIGAMREELTNLEEPGLYNDFVRDLKKSLLSGALGGDRRDF 680
Query: 643 FDFLMSKKLSLISKSEAVDSDITDDEAGSF 672
+ L KL LI K ++ S +T +EA F
Sbjct: 681 WFKLRWAKLGLIDKKQSEASTVTPEEADEF 710
>gi|350635711|gb|EHA24072.1| hypothetical protein ASPNIDRAFT_180705 [Aspergillus niger ATCC
1015]
Length = 724
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 163/702 (23%), Positives = 291/702 (41%), Gaps = 108/702 (15%)
Query: 45 VGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL-----PQGTCAGDYM 99
+GV+ T++T NEL + Y H+ VL IK L+ ++ L P T GD +
Sbjct: 53 IGVLGLRTDDTANELEDD-PDYSHISVLSGIK---QFLMPDIRGLSDRIKPSKTNKGDAI 108
Query: 100 --------LIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMK 151
+I + K K+ + L+T+ P+ D +S I +++ + +
Sbjct: 109 SALVLAIQMIITQCKKLKYKRRIVLVTNGQGPMN-------PDNLSEITKKIKEDNIELI 161
Query: 152 NIVVRASLS-------GEPHMRVI--------IENDNLLNIFSKKSSAKTLFVDSTTSLR 196
++V L+ +P V EN+ LL ++ ++ +
Sbjct: 162 ILLVTGVLTCCRGPDFDDPEYGVKEEDKDPRKAENETLLRSLAEDCDGAYGTLEQAVAEL 221
Query: 197 GARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHE- 255
+ + F+G L+L + V + E++ + Y KAPS +F
Sbjct: 222 ETPRVKTTRITASFKGHLQLGNPAEYDTAV--RIPVERY--YRTYVAKAPSASQFTVRNE 277
Query: 256 --------------------VKVDYEYK----SVEDPSKVVPPEQRIKGYRYGPQVVPIS 291
V+ + Y+ + E+ + V EQ KGY YG +VPIS
Sbjct: 278 EEMGMAAAAAGSQEGSSLVGVRNNRSYQIDDGTTEEGVRDVDREQLAKGYEYGRTLVPIS 337
Query: 292 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKE 351
+ + +++LLGF + R+ +M N+ IA+ N +A +A+S+ A+ E
Sbjct: 338 ETDENITTLETFAAIELLGFIQSDRYDRYMHMSTTNIIIAQRANDKAALALSSFIHALFE 397
Query: 352 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD--SFYFNVLPFAEDVREFQFPSFSK 409
+ A+ R V ++ + V+V VL P++ PD LPFAEDVR ++FP +
Sbjct: 398 LESYAVARMVLKENKPPVIV-VLAPSIE-----PDYECLLEAQLPFAEDVRTYRFPPLDR 451
Query: 410 -FPVSWQ--------PNEQQQEAADNLVKMLDLAPSGKG----EILQPELTPNPALERFY 456
VS + PN+ A D VK ++L + E L + + +P L R
Sbjct: 452 VITVSGKVVTQHRNLPNDDLLNAMDKYVKSMELTDMDENDDPTESLPIDDSFSPVLHRID 511
Query: 457 HHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRR 516
+ ++ H + PP L K + P L+ +S+ + +K+ P K T+R
Sbjct: 512 SAIRHRAIHPNDPIPPPASVLTKFSHPPDDLVEKSKKYLYKLVAVSDVKKVPPKTKGTKR 571
Query: 517 FLR-EKPSGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDW 575
EKP S D A+ E + KI I +F+ +S+ + +
Sbjct: 572 TRETEKPL---------SGLDVDALLHQEKRT-----KISPNNAIPEFKQTLSQAENIEI 617
Query: 576 VDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICR 635
+ A++ M I + +S NY + E L +R+ I +EP +ND L+++ +
Sbjct: 618 IKDAVKQMSTIIEDQIRHSLGDANYHRVTEGLGVMREELIDYEEPALYNDFLKRLKEKLL 677
Query: 636 KR----NFSTFFDFLMSKKLSLISKSEAVDSDITDDEAGSFI 673
K + + L KL LI + E+ S++ ++EA +F+
Sbjct: 678 KEELGGDRRELWWLLRRSKLGLIEQRESEHSEVGEEEAKAFM 719
>gi|429861179|gb|ELA35879.1| ku family dna [Colletotrichum gloeosporioides Nara gc5]
Length = 727
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 172/704 (24%), Positives = 297/704 (42%), Gaps = 99/704 (14%)
Query: 41 KNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKH--LPQGTCAGDY 98
K VGV+ T++T N + + GYE + VLQ++ + ++ LK P GT GD
Sbjct: 49 KTWTVGVVGLKTDDTRNAMQDD-EGYESISVLQELGPMTLTSMRELKEEIKPSGTETGDA 107
Query: 99 M--------LIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRM 150
+ +I+ + + K K+ + LITD L P+ DV ++++ +++ G+
Sbjct: 108 VSAVVIAVDMIQTFTKKLKYKRRVYLITDGLGPIDADDVDDIAKKINSDGIELIVLGVDF 167
Query: 151 KNIVVRASLSGEPHMRVIIENDNLLNIFSKK-------SSAKTLFVDSTTSLRGAR--KT 201
+ +P ++ +N+ +L + K + A+ + T L+ R KT
Sbjct: 168 DDAEYGFKEEDKPSIKK--QNEEVLKDLASKCDNGQFATIAEAIDELDTPRLKAVRPYKT 225
Query: 202 RDISPVTIFRGDLELSEKMK-----IKVWVYKKTGEEKFP---TLKKYSDKAP------- 246
D P+T+ D K+ I V Y KT K P T+ +D +
Sbjct: 226 YD-GPLTLGHADPPPELKIPPTPVIINVERYFKTKLAKAPGSSTVVVSADPSSQSTHTMD 284
Query: 247 --------STDKFATHEVKVDYEYKSVEDPS-----KVVPPEQRIKGYRYGPQVVPISSA 293
ST FA VK YK V DP + V E KGY YG V IS +
Sbjct: 285 AEPMEGVESTAGFAA--VKSARTYK-VNDPDAPGGKRDVEFEALAKGYEYGRTAVAISES 341
Query: 294 EWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMN 353
EW K + K+ ++GF + M + + + + ++ +A+S+L A+ E+
Sbjct: 342 EWNVTKLETIKTFTIIGFIPSEKYEPFLNMGETCVTVGRKFDEKSQLALSSLIHALYELE 401
Query: 354 KVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK-FPV 412
A+ R V ++ + ++V +L P + + + Y LPFAEDVR +QFP + V
Sbjct: 402 SYAVARLVIKEKKDPLLV-LLAPRIEPDM---ECLYDIPLPFAEDVRGYQFPPLDQVITV 457
Query: 413 SWQ---------PNEQQQEAADNLVKMLDLAPSGKGEILQP------ELTPNPALERFYH 457
S Q P+++ +A + V +DL G + P + T NP + R
Sbjct: 458 SGQKITTNHRLLPSDELTDAMSDYVDSMDLGTFGNDDEGNPSEYAAIDDTYNPIIHRLNQ 517
Query: 458 HLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRF 517
+ ++ + P+ L + P L+ +S S+I+A +K+ P K R
Sbjct: 518 AIRQRAVDPEGKIDPVPPVLVRYAAPPEDLVQKSASSIEALITAADVKKVPPKAKGKRNR 577
Query: 518 LREKP-SGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTP---IQDFEAMMSRRDCP 573
KP SG D V+++ + T K ++P I +F+ + +
Sbjct: 578 ETIKPLSGLD-------------VDAL----LGTAPKRAKISPENAIPEFKQALDTAEDI 620
Query: 574 DWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKI 633
+ A M + + L+ +S NY +A E L LR+G I +EP +ND + + K
Sbjct: 621 AQIKHAAAQMGSIVRSLVTDSFGDANYARAAENLGVLREGLIDMEEPGIYNDFMRDLKKK 680
Query: 634 CRKRNFST----FFDFLMSKKLSLISKSEAVDSDITDDEAGSFI 673
+ + + +L LI +S + S +T DEA F+
Sbjct: 681 MLSGELGGDRREMWWKIRTSRLGLIDQSASEVSKVTSDEADEFL 724
>gi|193613368|ref|XP_001944675.1| PREDICTED: x-ray repair cross-complementing protein 5-like
[Acyrthosiphon pisum]
Length = 665
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 166/709 (23%), Positives = 314/709 (44%), Gaps = 96/709 (13%)
Query: 2 ARTREALLLLLDVSPSMHSVLPDVE------KLCSRLIQKKLIYGKNHE-VGVILFGTEE 54
A +E ++L +DV + + D + KLC+ +I ++ I+ ++ + V +ILFG+ +
Sbjct: 3 ANKKEVIILAIDVGINSLKLDSDGKTYFEKSKLCASMILRRKIFAESKDYVALILFGSNQ 62
Query: 55 TENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL-PQGTCAGDYMLIKKYGETYKGKKH 113
T+N L + G +++++ + VV L++ + L P D++
Sbjct: 63 TKNHLASQ--GCNNIEIVTSLGVVTWDLIKHIDSLSPSDITRSDWL------------NT 108
Query: 114 LCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVI----- 168
L L D + + D ++ Q+ +I+ R + + +I
Sbjct: 109 LVLAAD-MAKKEIQDKIFQDLQIVMFTNLATDISFDKIDIIARCIQTQRIDLTIIGTDCE 167
Query: 169 -IENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVY 227
+ ++L F +K+ A T+ +DS K ++++P + L IKV Y
Sbjct: 168 DVLRSSVLETFIRKTEATTVSLDSVLPNICNYKLKEVTPRA-WNVPLSFGNVFNIKVIGY 226
Query: 228 KKTGEE----KFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKV-VPPEQRIKGYR 282
KK E K+ + Y + D + Y Y V++ ++ V E I G+R
Sbjct: 227 KKIDETPKSFKWSLCRNYD----TPDSITEMNKRTTYSY--VDNGEQIEVDHENIIDGFR 280
Query: 283 YGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVA 341
+G ++P+S + +A +K + +++LGFT A NI R + M D +I +P + VA
Sbjct: 281 FGDTIIPVSDLDIQAYSYKSGPRGLQVLGFTKAKNIQRSFLM-DGGSYIFKP-HKDDIVA 338
Query: 342 VSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNV--LPFAEDV 399
SA+ +AM + ++ I+R V+ +G + P + +K N YF LP+AE+
Sbjct: 339 FSAIFKAMIKREELMIIRKVYLNDCMP-TIGAMFPQIEDKEN-----YFVCVNLPYAEEE 392
Query: 400 REFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHL 459
F+ PS F +PN +++ A NL+ +DL + PE T +P L+ Y +
Sbjct: 393 HLFKLPSLESF----KPNYEEKNAVCNLIDAMDLDDEDDELFI-PETTHDPELQYVYDCV 447
Query: 460 ELKSEHQD-AAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFL 518
K+ + D + + ++ + +P ++ +++ ID F S ++ +
Sbjct: 448 AQKAINPDKLLTKTIPEYIQSLLDPPKEMMEKAKQPIDEIIKLF----------SLQQEI 497
Query: 519 REKPSGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDK 578
EK S ++ N D + NS + V+T +PI+DF ++ + +
Sbjct: 498 SEK-SPIEDNNASKFDCDEEVENSKQC--VITA-----FSPIEDFNKLLE-----NGFNS 544
Query: 579 AI--EDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVL----EKVCK 632
AI MKN L+E+S + K L ALR+ I + + K +N+++ + V
Sbjct: 545 AIVCGKMKNITLDLIESSTSMKDLEKPASNLKALREFYIHDNDVKSYNNLMYLVKDSVLL 604
Query: 633 ICRKRNFSTFFDFLMSKKLSLISKSEAVDSDITDDEAGSFIVKSQPKHE 681
++ +S F D + LI+ E SDIT + + +F+ KHE
Sbjct: 605 SGKEEMWSQFID----SGIGLITNQEVEISDITQELSENFM-----KHE 644
>gi|452988385|gb|EME88140.1| hypothetical protein MYCFIDRAFT_62686 [Pseudocercospora fijiensis
CIRAD86]
Length = 730
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 157/686 (22%), Positives = 280/686 (40%), Gaps = 73/686 (10%)
Query: 45 VGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKH--LPQGTCAGDY---- 98
GVI T++T+NEL + Y ++ V + I V ++ L+ T +GD
Sbjct: 53 AGVIGLRTDDTDNELADDDDSYNNISVFKPISQVTMTDIRRLRDQLTVSNTDSGDAVSAL 112
Query: 99 -MLIKKYGETYKG---KKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV 154
+ I ET K K+ + LITDA + D+ ++ ++V G+ +
Sbjct: 113 ALAIHMIAETCKKLQYKRKIVLITDASSSMDTDDLSHFTKKIKEDDMELVILGVDFDD-- 170
Query: 155 VRASLSGEPHMRVIIENDNLLNIFSKKSS------AKTLFVDSTTSLRGARKTRDISPVT 208
E + N+ +L F A+ + L+ + T + +T
Sbjct: 171 AEYGFKEEDKGSLKASNEAILEQFCHDCDGAFGTLAQAIDELQIPRLKVTKGTPTRTILT 230
Query: 209 IFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKY-------------------SDKAP-ST 248
+ D + + + I+V Y K P+ K+ S +AP
Sbjct: 231 LGNPD-QYDDALTIEVERYIKVMRASPPSASKFVVREGVQHPTQSSATLSNGSAQAPEGG 289
Query: 249 DKFATHEVKVDYEYKSVEDPS--KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSV 306
D A Y+ P K V ++ KGY YG V IS ++ F+ + +
Sbjct: 290 DGLAAVRTARSYQVDDENAPGGKKDVEADELSKGYEYGRTAVHISESDQNVTTFETKPGL 349
Query: 307 KLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQ 366
++LGF D + R+ M + IA+ + +A++A+S+L A+ E+ AI R V R
Sbjct: 350 EILGFVDRNQYHRYLDMSRSQMIIAKRTDEKASMALSSLIHALYELESFAIARMVPRANS 409
Query: 367 QSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK-FPVSWQ--------PN 417
Q ++ VL+PN+ + Y LPF EDVR ++FP + VS + P
Sbjct: 410 QPRLI-VLSPNIESDF---ECLYDTELPFNEDVRNYKFPPLDRVLTVSGKQLKIHRNLPE 465
Query: 418 EQQQEAADNLVKMLDLAPSG------KGEILQPELTPNPALERFYHHLELKSEHQDAAPP 471
E +A + V ++L + + E + T NP + + ++ ++ + D PP
Sbjct: 466 EDLLDAMSDYVDNMNLLKANTEDADEQSEYAAMDDTYNPVIHKLTQAIKHRAVYPDDEPP 525
Query: 472 PLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGD 531
+ K ++P L+ +S++A+D +K+ P K +R+ R +D P
Sbjct: 526 EPYHIITKYSQPPEHLVEQSKTALDKVIAAGSVKKVPP-KARGKRWGR-----TDAPK-- 577
Query: 532 GSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLL 591
+SD + P KI I +F+ M+ D + +A + +K I
Sbjct: 578 -PLSDLDVAALLAQDPKRKAKKIDPENAIPEFKQMLQHADAIPEIYEACKQLKFIILDWA 636
Query: 592 ENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFS----TFFDFLM 647
+S N + VE + +R+ I +EP FND L+++ + + +
Sbjct: 637 RHSIGESNTGRVVEGIRVMREEVIEFEEPAAFNDALKEIKRKMLGGELGGDRKEMWYRIR 696
Query: 648 SKKLSLISKSEAVDSDITDDEAGSFI 673
KL I K E SD +++EA +F+
Sbjct: 697 VNKLRPIDKKECAQSDFSEEEAKAFL 722
>gi|380485672|emb|CCF39209.1| Ku70/Ku80 N-terminal alpha/beta domain-containing protein
[Colletotrichum higginsianum]
Length = 730
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 164/705 (23%), Positives = 287/705 (40%), Gaps = 98/705 (13%)
Query: 41 KNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL-----PQGTCA 95
K VG I T+ET N + + GYE++ VL+++ + + SL+ L P T
Sbjct: 49 KTWTVGFIGLKTDETRNAMMDD-EGYENISVLRELGPM---TLTSLRELRAEVKPSETET 104
Query: 96 GDYM--------LIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFG 147
GD + +I+K+ T K K+ + L+TD L P+ D+ + +++ ++ G
Sbjct: 105 GDAVSAVVLAVDMIEKFTRTLKYKRRIYLVTDGLAPIDGDDIDSIAKKINQDGIELTVLG 164
Query: 148 LRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKK-------SSAKTLFVDSTTSLRGAR- 199
+ + +P ++ +N+ +L K + A+ + T L+ R
Sbjct: 165 VDFDDAEYGFKEEDKPSIKK--KNEGILQELVSKCDKGQFATIAEAIDELDTPRLKPTRP 222
Query: 200 -KTRDISPVTIFRGDLELSEKMK-----IKVWVYKKTGEEKFPTLKKYSDKAP------- 246
KT D P+T+ D K+ I V Y +T + K PT A
Sbjct: 223 YKTYD-GPLTLGLADPPADLKIPPTPVVINVERYFRTKQAKPPTASTVVVSAEGQGAASQ 281
Query: 247 --------------STDKFATHEVKVDYEYKSVEDPS--KVVPPEQRIKGYRYGPQVVPI 290
S FA Y + P + V + KGY YG V I
Sbjct: 282 STQALEGEPMEGVESVSGFAAVRSARTYRVNDPDAPGGKRDVEFDSLAKGYEYGRTAVAI 341
Query: 291 SSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMK 350
S +EW K + ++ ++GF M + + ++ + ++ +A+S+L A+
Sbjct: 342 SESEWNVTKLETVRTFSIIGFIPCEKYEPFLNMGETCMTVSRKFDEKSQLALSSLIHALY 401
Query: 351 EMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK- 409
E+ A+ R V + + V+V +L P + + + Y LPFAEDVR +QFP +
Sbjct: 402 ELESYAVARLVVKDKKDPVLV-LLAPRIEPDM---ECLYDVPLPFAEDVRGYQFPPLDRV 457
Query: 410 FPVSWQ---------PNEQQQEAADNLVKMLDLAPSGKGEILQP------ELTPNPALER 454
VS Q P + A + V +DL G E P + T NP + R
Sbjct: 458 VTVSGQEITENHRLLPGDDLTAAMSDYVDSMDLGTFGADEDGNPSEYAAIDDTYNPMIHR 517
Query: 455 FYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKST 514
+ ++ P+ L + P L+ +S S I +K+ P K
Sbjct: 518 INQAIRQRAVDPQGTIEPVPPILVRYAAPPEELVEQSSSQIKTLVSAAQVKKVPPKAKGK 577
Query: 515 RRFLREKP-SGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCP 573
R+ KP SG D DA + + +P ++V+ I +F+ ++ D
Sbjct: 578 RKHEASKPLSGLD--------VDA-LLGTQPKRPKISVENA-----IPEFKRALAVADEV 623
Query: 574 DWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKV-CK 632
+ + A M + + L+ +S NY +A+E L LR G + EP +ND++ + K
Sbjct: 624 ETIVDAXTQMGDIVARLVADSFGDANYARALENLTVLRGGLVDLDEPAVYNDIVRGLKGK 683
Query: 633 ICRKR----NFSTFFDFLMSKKLSLISKSEAVDSDITDDEAGSFI 673
I ++ MS +L L+ ++ + SD+T ++A F+
Sbjct: 684 ILSGELGGDRREMWWKIRMS-RLGLVDQATSEVSDVTSEQADEFL 727
>gi|134076155|emb|CAK48968.1| unnamed protein product [Aspergillus niger]
Length = 725
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 161/687 (23%), Positives = 285/687 (41%), Gaps = 106/687 (15%)
Query: 54 ETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL-----PQGTCAGDYM--------L 100
ET NEL + Y H+ VL IK L+ ++ L P T GD + +
Sbjct: 73 ETANELEDD-PDYSHISVLSGIK---QFLMPDIRGLSDRIKPSKTNKGDAISALVLAIQM 128
Query: 101 IKKYGETYKGKKHLCLITDALCPLKDPDVG-----TKEDQVSTIAR----QMVAFGLRMK 151
I + K K+ + L+T+ P+ ++ KED + I +G++ +
Sbjct: 129 IITQCKKLKYKRRIVLVTNGQGPMNPDNLSEITKKIKEDNIELIILGPDFDDPEYGVKEE 188
Query: 152 NIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFR 211
+ R + EN+ LL ++ ++ + + + F+
Sbjct: 189 DKDPRKA-----------ENETLLRSLAEDCEGAYGTLEQAVAELETPRVKTTRITASFK 237
Query: 212 GDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHE---------------- 255
G L+L + V + E++ + Y KAPS +F
Sbjct: 238 GHLQLGNPAEYDTAV--RIPVERY--YRTYVAKAPSASQFTVRNEEEMGMAAAAAGSQEG 293
Query: 256 -----VKVDYEYK----SVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSV 306
V+ + Y+ + E+ + V EQ KGY YG +VPIS + + ++
Sbjct: 294 SSLVGVRNNRSYQIDDGTTEEGVRDVDREQLAKGYEYGRTLVPISETDENITTLETFAAI 353
Query: 307 KLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQ 366
+LLGF + R+ +M N+ IA+ N +A +A+S+ A+ E+ A+ R V ++ +
Sbjct: 354 ELLGFIQSDRYDRYMHMSTTNIIIAQRANDKAALALSSFIHALFELESYAVARMVLKENK 413
Query: 367 QSVVVGVLTPNVSEKINIPD--SFYFNVLPFAEDVREFQFPSFSK-FPVSWQ-------- 415
V+V VL P++ PD LPFAEDVR ++FP + VS +
Sbjct: 414 PPVIV-VLAPSIE-----PDYECLLEAQLPFAEDVRTYRFPPLDRVITVSGKVVTQHRNL 467
Query: 416 PNEQQQEAADNLVKMLDLAPSGKG----EILQPELTPNPALERFYHHLELKSEHQDAAPP 471
PN+ A D VK ++L + E L + + +P L R + ++ H + P
Sbjct: 468 PNDDLLNAMDKYVKSMELTDMDENGDPTESLPIDDSFSPVLHRIDSAIRHRAIHPNDPIP 527
Query: 472 PLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLR-EKPSGSDEPNG 530
P L K + P L+ +S+ +D +K+ P K T+R EKP
Sbjct: 528 PPASVLTKFSHPPDDLVEKSKKYLDKLVAVSDVKKVPPKTKGTKRTRETEKPL------- 580
Query: 531 DGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGL 590
S D A+ E + KI I +F+ +S+ + + + A++ M I
Sbjct: 581 --SGLDVDALLHQEKRT-----KISPNNAIPEFKQTLSQAENIEIIKDAVKQMSTIIEDQ 633
Query: 591 LENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKR----NFSTFFDFL 646
+ +S +NY + E L +R+ I +EP +ND L+++ + K + + L
Sbjct: 634 IRHSLGDVNYHRVTEGLGVMREELIDYEEPALYNDFLKQLKEKLLKEELGGDRRELWWLL 693
Query: 647 MSKKLSLISKSEAVDSDITDDEAGSFI 673
KL LI + E+ S++ ++EA +F+
Sbjct: 694 RRSKLGLIEQRESEHSEVREEEAKAFM 720
>gi|62821807|ref|NP_001017360.1| X-ray repair complementing defective repair in Chinese hamster
cells 5 [Danio rerio]
gi|58221047|gb|AAW68220.1| Ku80 protein [Danio rerio]
Length = 727
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 120/469 (25%), Positives = 207/469 (44%), Gaps = 25/469 (5%)
Query: 214 LELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVP 273
L + + I++ YK EEK K S +VK + Y +D V
Sbjct: 248 LTIGSSLSIRIVGYKAVTEEKV----KKSWTIVDAQSHQRDDVKRETVYCLNDDDETEVQ 303
Query: 274 PEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNILRHYYMKDVNLFIAE 332
+ I+GYRYG +VP S + E +K+K + K +LGFT I RH +M + +
Sbjct: 304 KDDTIQGYRYGSDIVPFSKVDEEQMKYKHDGKCFSVLGFTKQELIPRHQFMGSQVVKVFA 363
Query: 333 P-GNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFN 391
P + A VA+S+L R + + AIVR + + + + VG P + +K + +
Sbjct: 364 PRDDEHAAVALSSLIRTLDGLKMAAIVRYAYDR-RSNPQVGAAFPCIKKKY---ECLLYV 419
Query: 392 VLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV-KMLDLAPSGKGE---ILQPELT 447
LP+ ED+R+F FP + P+ Q A D L+ M+ + GE I +
Sbjct: 420 QLPYMEDLRQFTFPMLENNK-KFMPSGSQLSAVDALIDSMMLMEKDENGESVDIFKVNHI 478
Query: 448 PNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKEN 507
PNP +R + L + + D PP+D LK++ E + A + + F +K
Sbjct: 479 PNPQFQRLFQCLHHRGVNPDDPLPPVDPWLKRVLERPQAVSARCHAPLRDVKTSFPLKVV 538
Query: 508 P---KLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFE 564
+ K S F S +DEP+ + + ++ + +G + P +DF
Sbjct: 539 VKKKEQKTSADVF----GSSADEPDAKKVKVNEETEFNLAEITEGNITSVGSVNPARDFC 594
Query: 565 AMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFN 624
++ ++ D+A + + ++I LL N + Y K++ + A R +L + FN
Sbjct: 595 TLIRQKTVS--FDQACQQLTHRIEQLLGNRSTEY-YTKSIACIQAFRDQSVLSGSAELFN 651
Query: 625 DVLEKVCKICRKRNFSTFFDFLMSKKLSLISKSEAVDSDITDDEAGSFI 673
L+ + + R+ F++ L ++LISK E S I+ EA F+
Sbjct: 652 SYLQSLKRSVADRSLQDFWNLLAQDGVTLISKDEVEASTISKQEANQFL 700
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 82/165 (49%), Gaps = 18/165 (10%)
Query: 1 MART-REALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGT 52
MAR + AL+L +DV S+ + P E K+ + +Q+++ E+G++LFGT
Sbjct: 1 MARAAKSALVLCMDVGFSISNSGPGQEPPFEQAKKVIQKFVQRQVFAENKDEIGLVLFGT 60
Query: 53 EETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDYM-----LIKKYGE 106
+ T+N L + G YE++ V + + + D L++ ++ Q G D++ +
Sbjct: 61 DGTKNPLAND-GQYENITVHRHLMMPDFELLEEIERELQPGGQQADWLDALVVCMDLLQN 119
Query: 107 TYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMK 151
GKK+ L + L D ++ T EDQ+ I + + G+ ++
Sbjct: 120 ETMGKKYDRL---NIALLTDLNIQTSEDQLDIIIQNLKKAGITLQ 161
>gi|225560795|gb|EEH09076.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 727
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 170/753 (22%), Positives = 322/753 (42%), Gaps = 116/753 (15%)
Query: 5 REALLLLLDVSPSMHSV-----LPDVEKLCSRLIQKKLIYG-----KNHEVGVILFGTEE 54
+EA + ++DV SM + D++ R I K+ K +GVI T++
Sbjct: 4 KEATVYIVDVGKSMGECHNGRSISDLD-WAMRYIWDKITTTVATGRKTATLGVIGLKTDD 62
Query: 55 TENELTK--EVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDYM--------LIK 102
+ N L + E Y ++ V QDI + ++ L+ L P T GD + +I
Sbjct: 63 SNNPLWEKDEEESYANISVFQDISQILMPQIRELRELIKPSHTLEGDAISSLILAIDMIV 122
Query: 103 KYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQ---MVAFGLRMKNIVVRASL 159
+Y + K K+ + L+TD + D+ + VS I + +V G+ +
Sbjct: 123 RYCKKLKYKRKIVLVTDGTGAM---DIDGIDGIVSKINEENIELVILGVDFDD--PEYGF 177
Query: 160 SGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLEL--- 216
E + +N++ L + ++ S +T+ + + F+GDL L
Sbjct: 178 KEEDKEPLKAKNESHLKQLVEDCEGMFGTLEHAISEMEIPRTKVVRSMPTFKGDLRLGDP 237
Query: 217 ---SEKMKIKVWVYKKT-------------------GEEKFPTLKKYSDKAPSTDKFA-- 252
S + I+V Y +T G+E + + K PS ++ A
Sbjct: 238 DQYSSALTIQVERYYRTYAARPPVASSFVSSSALSEGQETAQSSATLATKEPSQERGAGA 297
Query: 253 ----------THEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKP 302
T++V + K + V ++ KGY YG V IS ++ K +
Sbjct: 298 ASLTAVRNARTYQV----DDKGAAGGKRDVARDELAKGYEYGRTAVHISESDENITKLET 353
Query: 303 EKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVW 362
E +++ +GF + N R+ M N+ IA+ N++A +A+S++ A+ E+ A+ R V
Sbjct: 354 EAALEFIGFIPSDNFDRYMNMSTSNIIIAQKTNNKAILALSSIIHALFELECYAVARLVP 413
Query: 363 RQGQQSVVVGVLTPNVSEKINIPD--SFYFNVLPFAEDVREFQFPSFSK-FPVSWQP-NE 418
+ G+ +VV +L P++ PD LPFAED+R ++FP K VS + E
Sbjct: 414 KAGKSPLVV-LLAPSIE-----PDYECLLEVQLPFAEDMRSYRFPPLDKVVTVSGKTVTE 467
Query: 419 QQQEAADNL-------VKMLDLAPSGK-GEILQP---ELTPNPALERFYHHLELKSEHQD 467
+ +D+L V L+L + GE ++ E + +P L R H + ++ H
Sbjct: 468 HRNLPSDSLLSRMAEYVDSLELTEKDEDGETIESMSIENSFSPLLHRIDHAIRWRAVHPS 527
Query: 468 AAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDE 527
PP+ + L+K++ L A+S++ + +K+ P K R++ D+
Sbjct: 528 EPFPPVPEILQKLSRQPEDLQAQSENTLANLIATSDVKKVPPKAKG-----RKRDREIDK 582
Query: 528 PNGDGSVSDAQAVNSMESKPVVTVDKIGDLTP---IQDFEAMMSRRDCPDWVDKAIEDMK 584
P ++ + + ++ +K ++P I +F+ + D V A++ M
Sbjct: 583 P-----------LSGLNVEELLQTEKRVKISPDNAIPEFKQSLVNSQDLDAVKDAVKQMS 631
Query: 585 NKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFS---- 640
+ I + +S NY +AVE L +++ + +EP +ND + + +
Sbjct: 632 SIIESQIRHSLGDANYDRAVEGLGTMKEELVAFEEPTLYNDFIRNLKTKLLGNDLGGDRR 691
Query: 641 TFFDFLMSKKLSLISKSEAVDSDITDDEAGSFI 673
+ ++ +L LI K + SD+T++EA +F+
Sbjct: 692 EMWWYIRKNRLGLIDKRLSELSDVTEEEARAFL 724
>gi|212542997|ref|XP_002151653.1| Ku family DNA helicase, putative [Talaromyces marneffei ATCC 18224]
gi|210066560|gb|EEA20653.1| Ku family DNA helicase, putative [Talaromyces marneffei ATCC 18224]
Length = 717
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 173/753 (22%), Positives = 317/753 (42%), Gaps = 128/753 (16%)
Query: 5 REALLLLLDVSPSM--HSVLPDVEKL--CSRLIQKKLIYG-----KNHEVGVILFGTEET 55
+EA + ++DV SM H+ D+ L R + K+ K +GV+ T+ET
Sbjct: 4 KEATVYIVDVGKSMKQHNNGRDISDLDWAMRYVWDKITTTVATGRKTATIGVVGLKTDET 63
Query: 56 ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL-----PQGTCAGDYM--------LIK 102
+ L + GYE++ V+Q + + L+ ++ L P T GD + +I
Sbjct: 64 KVPLEDD-EGYENISVMQGLGQM---LMPDIRRLREEIKPSETDEGDAISSLIVAIQMIN 119
Query: 103 KYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVV------- 155
Y + K K+ + L+T+ + D + IA ++ A + + + V
Sbjct: 120 VYTKKLKYKRKIYLVTNGKGAIS-------SDGLEDIASKLKADNIELIVLGVDFDDPDY 172
Query: 156 --------RASLSGEPHMRVIIEN-DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISP 206
E +R ++E+ D + ++ + L + +RG
Sbjct: 173 GFKEEDKDEGKAENEALLRGLVEDCDGVYGTLAQ--AIAELDIPRVKVVRG--------- 221
Query: 207 VTIFRGDLELSEKM------KIKVWVYKKTGEEKFPTLKKYSDKA------PST------ 248
V FRGDL L M +I+V Y +T K P+ + K PST
Sbjct: 222 VPSFRGDLRLGNPMQYDTALRIQVERYYRTYVAKPPSTSSFVVKTGGDASQPSTQTLEAS 281
Query: 249 -DKFATHEVKVDYEYKSVEDPSKV-----VPPEQRIKGYRYGPQVVPISSAEWEAVKFKP 302
D A + V+DP V + ++ KGY YG VPIS ++ K +
Sbjct: 282 KDADANLTSVRNVRTYHVDDPQVVGGKRELERDELAKGYEYGRTAVPISESDENITKLET 341
Query: 303 EKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVW 362
+++L+GF A + R M N+ IA+ N +A +A+S+L A+ E++ AI R V
Sbjct: 342 MAALELIGFIQADHYDRFMNMSTSNVIIAQKTNEKAALALSSLIHALFELDCYAIARLVT 401
Query: 363 RQGQQSVVVGVLTPNVSEKINIPD--SFYFNVLPFAEDVREFQFPSFSK-FPVSWQ---- 415
+ G+ ++V +L P + PD LPF+EDVR ++FP + +S +
Sbjct: 402 KDGKSPLIV-LLAPLID-----PDYECLLEVQLPFSEDVRSYKFPPLDRVITISGKEVKE 455
Query: 416 ----PNEQQQEAADNLVKMLDLAPSG-KGEILQP---ELTPNPALERFYHHLELKSEHQD 467
P+E A V ++L +GEI++ E +P L R + ++ H D
Sbjct: 456 HRNLPSEDLVNAMSKYVDSMELIDKDEEGEIVETIPMEDNYSPLLHRIEQAVRWRAIHPD 515
Query: 468 AAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDE 527
PP + L ++++P + +Q +D +K+ P K R++ D+
Sbjct: 516 EPVPPPSERLTRLSKPPKEVQERAQKYLDRIIRAADVKKVPPKAKG-----RKRNRDVDK 570
Query: 528 PNGDGSVSDAQAVNSMESKPVVTVDKIGDLTP---IQDFEAMMSRRDCPDWVDKAIEDMK 584
P ++ ++ ++ +K ++P I +F+ M++ + + + A M+
Sbjct: 571 P-----------LSGLDIDELLHREKRAKISPTNAIPEFKQMLATAETVETIKDATSQMQ 619
Query: 585 NKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVL----EKVCKICRKRNFS 640
I + S NY + VE L LR+ I +EP +N+ + EK+ +
Sbjct: 620 KIIEDHIRTSFGDSNYDRVVEELGVLREELIDYEEPGLYNEFVQPLKEKILTEKLGGDRQ 679
Query: 641 TFFDFLMSKKLSLISKSEAVDSDITDDEAGSFI 673
+ + K+ LI K+ + S+++++EA F+
Sbjct: 680 ELWWLIRRSKIGLIDKATSDQSEVSEEEAKQFL 712
>gi|403347774|gb|EJY73321.1| hypothetical protein OXYTRI_05549 [Oxytricha trifallax]
Length = 679
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 127/445 (28%), Positives = 204/445 (45%), Gaps = 68/445 (15%)
Query: 211 RGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTD---KFATHEVKVDYEYKSVED 267
+G+L++S+ K+ V +Y +T EE P L K+S A S + FA + ++ +++D
Sbjct: 132 QGNLDISKNCKLNVLIYSRTREEFLPILMKHSLVAESKNIKVGFAKVQTQM-----AIDD 186
Query: 268 PSKV-VPPEQRIKGYRYGPQVV----PISSAEWEAVKFKP---EKSVKLLGFTDASNILR 319
K+ VP EQ IK + YG Q+V I + + +K + EK KLLGFTD + L
Sbjct: 187 LDKITVPSEQDIKAFNYGKQIVRRTLGIEYVDDKDIKLQSSYCEKQFKLLGFTDDQSSLS 246
Query: 320 HYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVS 379
+ + + N RA + L A+ E +++ I R + R+ +V + + N
Sbjct: 247 SFLSR---CLLRGSFNERA---FAVLVYAVIETHRILITRIIERKNYYLKLV-LYSHNQQ 299
Query: 380 EKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKG 439
E+ N + LP E+ R+++F S +P S +AA L+K LD K
Sbjct: 300 EEANT----VYGQLPTNEEKRDYKFLSL--YPAS----RNHMQAAMELIKALDFHK--KK 347
Query: 440 EILQPELTPNPALERFY---HHLELKSEHQDAAPPP--LDDSLKKITE---PDPTLLAES 491
+ +L AL L+ Q+ +P L D K I E D L +
Sbjct: 348 TQMSQKLMNRQALFDIRPCSQVLQSNRRAQNDSPEEQVLQDLNKAIAEYVNTDKELFTHA 407
Query: 492 QSAIDAFCGQFV-----IKENPKLKKSTRRFLR--EKPSGSDEPNGDGSVSDAQAVNSME 544
Q AF F KEN K +++ ++ + G + + DG+V +
Sbjct: 408 QEEASAFEEAFKPEHNNEKENKKQEEAIIAMMKLIQNGGGFEFKDNDGAVKE-------- 459
Query: 545 SKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAV 604
IG + PI+DF+ M++ R D V AI+ MK+ I L+ NS G Y KA+
Sbjct: 460 ---------IGSVNPIEDFKKMVTDRKV-DRVGTAIDQMKDMITKLVNNSLNGDLYHKAI 509
Query: 605 ELLVALRKGCILEQEPKQFNDVLEK 629
E L +LR+ CI E E ++FN +E+
Sbjct: 510 ECLASLREACITEDEAQEFNLFMEQ 534
>gi|121710658|ref|XP_001272945.1| Ku family DNA helicase, putative [Aspergillus clavatus NRRL 1]
gi|119401095|gb|EAW11519.1| Ku family DNA helicase, putative [Aspergillus clavatus NRRL 1]
Length = 720
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 159/690 (23%), Positives = 281/690 (40%), Gaps = 87/690 (12%)
Query: 41 KNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL-----PQGTCA 95
K +GVI T+ET NEL +E + H+ VL I+ L+ ++ L P T
Sbjct: 49 KTATIGVIGLKTDETSNEL-EEDPHFRHISVLSGIQ---QFLMPDIRKLAGTIKPSKTDK 104
Query: 96 GDYM--------LIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFG 147
GD + +I Y + K K+ + L+T+ + D+ ++ ++V G
Sbjct: 105 GDAISAIILAIQMIVTYCKKLKYKRKIVLVTNGRGWMSSEDLEQITQKIKEDNIELVVLG 164
Query: 148 LRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPV 207
+ E EN+ LL + ++ S + + + V
Sbjct: 165 TDFDD--PEYGFKEEEKDAQKAENEALLRGLVEDCDGAYGTLEQAVSEMDIPRVKKVRTV 222
Query: 208 TIFRGDLELSE------KMKIKVWVYKKTGEEKFP--------------------TLKKY 241
F+G L+L ++I V Y +T K P T+
Sbjct: 223 ATFKGYLQLGNPEEYETALRIPVERYYRTYVAKPPSASSFVLRSEIPEQDLEESGTVTGT 282
Query: 242 SDKAPSTDKFATHEVKVDYEYKSVEDP-SKV-VPPEQRIKGYRYGPQVVPISSAEWEAVK 299
D P + Y+ P KV V E+ KGY YG V IS+ +
Sbjct: 283 PDTHPEGGPLTSVRNLRTYQVTDENAPGGKVDVEREELAKGYEYGRTAVHISATDENITT 342
Query: 300 FKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVR 359
+ +++L+GF R+ ++ N+ + + GN +A++AVS+ A+ E+ A+ R
Sbjct: 343 LETFAALELVGFIQTDKYDRYMHLTTTNIIVGQRGNDKASLAVSSFIHALFELECFAVAR 402
Query: 360 CVWRQGQQSVVVGVLTPNVSEKINIPD--SFYFNVLPFAEDVREFQFPSFSK-FPVSWQ- 415
V ++ + V+V +L P++ PD LPFAEDVR ++FP + VS +
Sbjct: 403 LVTKENKAPVMV-LLAPSIE-----PDYECLLEVQLPFAEDVRTYRFPPLDRVITVSGKV 456
Query: 416 -------PNEQQQEAADNLVKMLDLAPSGKG----EILQPELTPNPALERFYHHLELKSE 464
PN+ +A V ++LA + + E L + + +P L R + ++
Sbjct: 457 VTEHRNLPNKDLLDAMSKYVDSMELANTDEDGEPVEGLPIDNSFSPVLHRIDSAIRYRAI 516
Query: 465 HQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKE-NPKLKKSTRRFLREKPS 523
H + PP +L K+++P L+ +++ ++ +K+ PK K R EKP
Sbjct: 517 HPNDPVPPPSKNLTKLSQPPQELVEKAERYLEKLMAAADVKKVPPKAKGRKRARESEKPL 576
Query: 524 GSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDM 583
S D A+ E + KI I +F+ +++ + + + +A++ M
Sbjct: 577 ---------SGLDVDALLHQEKRA-----KISSNNAIPEFKQTLAQAENIETITEAVKQM 622
Query: 584 KNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFS--- 640
I ++NS NY + E L +R I +EP +ND L ++ K
Sbjct: 623 NTIIEDQVQNSLGDANYDRVNEALGVMRGELIAFEEPALYNDFLRQLKDKLLKEELGGDR 682
Query: 641 -TFFDFLMSKKLSLISKSEAVDSDITDDEA 669
+ L KL LI E+ SD+T+++A
Sbjct: 683 RELWWLLRRSKLGLIHHRESDQSDVTEEQA 712
>gi|440475797|gb|ELQ44459.1| hypothetical protein OOU_Y34scaffold00087g37 [Magnaporthe oryzae
Y34]
gi|440486397|gb|ELQ66269.1| hypothetical protein OOW_P131scaffold00411g3 [Magnaporthe oryzae
P131]
Length = 750
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 174/751 (23%), Positives = 305/751 (40%), Gaps = 115/751 (15%)
Query: 13 DVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELTKEVG--GYEHVK 70
D+ SM V +KLC+ + K +VGV+ T+ T+N L + G GY ++
Sbjct: 28 DLDWSMRYVW---DKLCTTTAASR----KTWQVGVVGVRTDVTDNPL-DDAGEKGYNNIS 79
Query: 71 VLQDIKVVDGHLVQSL--KHLPQGTCAGDY---------MLIKKYGETYKGKKHLCLITD 119
VLQ++ + ++ L K +P T GD M+ + + K K+ + L+TD
Sbjct: 80 VLQNVAPMTLSALKLLQDKLVPSSTSDGDVVSAIVVAIAMIDEAAPQRLKYKRKIVLVTD 139
Query: 120 ALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFS 179
+ DVG +++ + ++ G+ + E ++ N+ LL S
Sbjct: 140 GQGAIDGDDVGDIARRINELNIEITIIGVDFDD--PEYPFKEEDKSQLKARNEKLLKSIS 197
Query: 180 K--KSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSE-------KMKIKVWVYKKT 230
K S +++ L R + P F G L L + + I V Y KT
Sbjct: 198 TECKESVYGTMIEAVDELDTPR-IKSTKPYKSFDGQLTLGDPETYKESALSIHVERYFKT 256
Query: 231 GEEKFPT-----LKKYSDKAPSTDKFAT--------HEVKVDYEYKSVEDPS-----KVV 272
+ + T +K +D S F ++K YK V DP + V
Sbjct: 257 KQARPITASNVMVKSETDATQSGQDFEGGDGAGGQFADLKTARNYK-VLDPDAPGGKRDV 315
Query: 273 PPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFT--DASNILRHYYMKDVNLFI 330
P ++ +GY YG VP+ +E+ K + +KS ++GF + R M + ++
Sbjct: 316 PQDELARGYLYGRTAVPMPESEFNITKLETKKSFTIIGFIAWEKKKYERFLNMGESSVIF 375
Query: 331 AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYF 390
A N + +A SAL A+ E + R V + G++ ++ +L P++ I + Y
Sbjct: 376 ASKFNEKDELAFSALVNALYETESYGVARLVAKDGKEPQLL-LLMPHIDTDI---ECLYD 431
Query: 391 NVLPFAEDVREFQFPSFSKFPV---------SWQPNEQQQEAADNLVKMLDLAPSGKGEI 441
LPFAED+R +QFP K P+++ +EA + V +D++ +G +
Sbjct: 432 VPLPFAEDIRYYQFPPLDKVVTLGGQTLTKHRLLPSDELEEAMSDYVDAMDISAAGGDDE 491
Query: 442 LQPELTP-----NPALERFYHHLELKSEHQDAAPPPLD-DSLKKITEPDPTLLAESQSAI 495
E P +P + R + + H D P LD + L + + P + + ++ I
Sbjct: 492 EAQEYAPIEDTYSPIIHRVNQAIRFRVVHPDK-PLGLDSEVLTRYSVPPRKVTSHAKDQI 550
Query: 496 DAFC-------GQFVIKEN----------------PKLKKSTRRFLREKPSGSDEPNGDG 532
+ G+F + PK K +R + + SG D
Sbjct: 551 ERLIKVAEVKKGKFSLPYTMREIVLTGYWFHSAVPPKAKGKRQREVVKPISGLD------ 604
Query: 533 SVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLE 592
DA NS KI + +F+ M++ D + ++ A + M + +
Sbjct: 605 --VDALLNNSSNGSSKAKRAKISAENSVPEFKQMLASADKVETIENATKQMGEVVTSFIN 662
Query: 593 NSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKV-CKICR------KRNFSTFFDF 645
S +NY +A E + +R + +EP +ND L+ + KI +R F
Sbjct: 663 TSMGDMNYDRAAENMRVMRDELVALEEPVFYNDFLKSLKTKIVSGELNGDRREMWWRIKF 722
Query: 646 LMSKKLSLISKSEAVDSDITDDEAGSFIVKS 676
+KL LI+K E+ S +T++EA F S
Sbjct: 723 ---EKLGLITKKESEVSSVTEEEAVQFFKTS 750
>gi|403351317|gb|EJY75148.1| hypothetical protein OXYTRI_03469 [Oxytricha trifallax]
Length = 873
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 127/445 (28%), Positives = 204/445 (45%), Gaps = 68/445 (15%)
Query: 211 RGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTD---KFATHEVKVDYEYKSVED 267
+G+L++S+ K+ V +Y +T EE P L K+S A S + FA + ++ +++D
Sbjct: 132 QGNLDISKNCKLNVLIYSRTREEFLPILMKHSLVAESKNIKVGFAKVQTQM-----AIDD 186
Query: 268 PSKV-VPPEQRIKGYRYGPQVV----PISSAEWEAVKFKP---EKSVKLLGFTDASNILR 319
K+ VP EQ IK + YG Q+V I + + +K + EK KLLGFTD + L
Sbjct: 187 LDKITVPSEQDIKAFNYGKQIVRRTLGIEYVDDKDIKLQSSYCEKQFKLLGFTDDQSSLS 246
Query: 320 HYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVS 379
+ + + N RA + L A+ E +++ I R + R+ +V + + N
Sbjct: 247 SFLSR---CLLRGSFNERA---FAVLVYAVIETHRILITRIIERKNYYLKLV-LYSHNQQ 299
Query: 380 EKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKG 439
E+ N + LP E+ R+++F S +P S +AA L+K LD K
Sbjct: 300 EEANT----VYGQLPTNEEKRDYKFLSL--YPAS----RNHMQAAMELIKALDFHK--KK 347
Query: 440 EILQPELTPNPALERFY---HHLELKSEHQDAAPPP--LDDSLKKITE---PDPTLLAES 491
+ +L AL L+ Q+ +P L D K I E D L +
Sbjct: 348 TQMSQKLMNRQALFDIRPCSQVLQSNRRAQNDSPEEQVLQDLNKAIAEYVNTDKELFTHA 407
Query: 492 QSAIDAFCGQFV-----IKENPKLKKSTRRFLR--EKPSGSDEPNGDGSVSDAQAVNSME 544
Q AF F KEN K +++ ++ + G + + DG+V +
Sbjct: 408 QEEASAFEEAFKPEHNNEKENKKQEEAIIAMMKLIQNGGGFEFKDNDGAVKE-------- 459
Query: 545 SKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAV 604
IG + PI+DF+ M++ R D V AI+ MK+ I L+ NS G Y KA+
Sbjct: 460 ---------IGSVNPIEDFKKMVTDRKV-DRVGTAIDQMKDMITKLVNNSLNGDLYHKAI 509
Query: 605 ELLVALRKGCILEQEPKQFNDVLEK 629
E L +LR+ CI E E ++FN +E+
Sbjct: 510 ECLASLREACITEDEAQEFNLFMEQ 534
>gi|121795545|sp|Q2MHH1.1|KU80_ASPSO RecName: Full=ATP-dependent DNA helicase II subunit 2; AltName:
Full=ATP-dependent DNA helicase II subunit Ku80
gi|85677430|dbj|BAE78504.1| Ku80 protein [Aspergillus sojae]
Length = 725
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 172/749 (22%), Positives = 307/749 (40%), Gaps = 121/749 (16%)
Query: 5 REALLLLLDVSPSMHSV-----LPDVE----KLCSRLIQKKLIYGKNHEVGVILFGTEET 55
+EA + ++DV SM + D+E + R+ K +GVI T+ET
Sbjct: 4 KEATVYIVDVGRSMGECRNGRSVTDLEWAMQYVWDRITGTVATGRKTATMGVIGLRTDET 63
Query: 56 ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL-----PQGTCAGDYM--------LIK 102
NEL +V + H+ VL +IK L+ ++ L P T GD + +I
Sbjct: 64 SNELEDDVH-FSHIAVLSNIK---QFLMPDIRKLEDELKPSKTDKGDAISAIILAIQMII 119
Query: 103 KYGETYKGKKHLCLITDALCPLKDPDVG-----TKEDQVSTIARQM----VAFGLRMKNI 153
+ + K ++ + L+T+ + D D+G KED + + + +G + ++
Sbjct: 120 THCKKLKYRRKIALVTNGQGRMSDEDLGEIVKKVKEDNIELVVMGIDFDDPEYGYKEEDK 179
Query: 154 VVRASLSGEPHMRVIIEN-DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRG 212
R + E +R ++E+ D + F + + L + S+R V F+G
Sbjct: 180 DPRKA-ENETLLRTLVEDCDGVYGTFEQ--AVAELDIPRVKSVRS---------VASFKG 227
Query: 213 DLELSE------KMKIKVWVYKKTGEEKFPTLKKY---------------------SDKA 245
L+L ++I V Y +T K PT + + K
Sbjct: 228 YLQLGNPEDYDSALRIPVERYYRTYPAKPPTASSFVLRSEPEAGQEEAESSEAAAATQKG 287
Query: 246 PSTDKFATHEVKVDYEYKSVEDPS----KV-VPPEQRIKGYRYGPQVVPISSAEWEAVKF 300
+ V+ Y+ VED S K+ + + KGY YG V IS +
Sbjct: 288 SQSGDIGLTTVRTMRTYQ-VEDKSAPGGKIDIERDDLAKGYEYGRTAVHISETDENITIL 346
Query: 301 KPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRC 360
++L+GF R+ +M + N+ IA+ N +A +A+S+ A+ E+ A+ R
Sbjct: 347 DTFAGLELMGFIQTDRYQRYMHMSNTNIIIAQRANDKAALALSSFIHALFELECYAVARL 406
Query: 361 VWRQGQQSVVVGVLTPNVSEKINIPD--SFYFNVLPFAEDVREFQFPSFSK-FPVSWQ-- 415
V ++ + V+V +L P++ PD LPFAEDVR ++FP K VS +
Sbjct: 407 VVKENKPPVIV-LLAPSIE-----PDYECLLEVQLPFAEDVRTYRFPPLDKVITVSGKVV 460
Query: 416 ------PNEQQQEAADNLVKMLDLAPSGKG----EILQPELTPNPALERFYHHLELKSEH 465
PN+ + V ++L + + E + + +P L R + ++ H
Sbjct: 461 TQHRNLPNDDLLDVMGKYVNSMELVDADEDGDPVETFPIDDSYSPVLHRIDAAIRARAIH 520
Query: 466 QDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKE-NPKLKKSTRRFLREKPSG 524
D PP + L K + P L+ SQ ++ +K+ PK K R EKP
Sbjct: 521 PDQPIPPPSERLTKFSHPREDLIERSQKYLEKLIEIADVKKVPPKAKGRKRTRETEKPL- 579
Query: 525 SDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMK 584
S D A+ E + KI I +F+ +++ + + + A + M
Sbjct: 580 --------SGLDVDALLHHEKRA-----KISPNNAIPEFKQTLAQAENIEAIKDATKQMM 626
Query: 585 NKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVL----EKVCKICRKRNFS 640
+ +++S NY + +E L +R + +EP +ND L +K+ + +
Sbjct: 627 VIVEDQIKHSLGNANYDRVIEALGTMRDELVSYEEPASYNDFLGQLKDKLLQEKLGGDRQ 686
Query: 641 TFFDFLMSKKLSLISKSEAVDSDITDDEA 669
+ + KL L+++ E+ S +TD EA
Sbjct: 687 ELWWLVRRNKLGLVTQRESDQSRVTDTEA 715
>gi|322707314|gb|EFY98893.1| ATP-dependent DNA helicase II subunit 2 [Metarhizium anisopliae
ARSEF 23]
Length = 688
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 173/732 (23%), Positives = 301/732 (41%), Gaps = 125/732 (17%)
Query: 5 REALLLLLDVSPSM---HSVLPDVE---KLCSRLIQKKLIYGKNHE---VGVILFGTEET 55
+EA + +LD+ SM HS + + +C + I N + VGV+ T+ET
Sbjct: 4 KEATVFILDLGASMAQKHSGREESDLDWAMCYVWDKITDIVAANRKTLCVGVVGLRTDET 63
Query: 56 ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDYM--------LIKKYG 105
N L ++ GYE++ V+Q++ + +++LK P T +GD + LI +
Sbjct: 64 NNRL-QDGDGYENISVIQELSQITMSGLRALKASVKPNETMSGDAVSAIVVAIDLIGTFT 122
Query: 106 ETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHM 165
+ K +++ L+TD + D+ +++ ++ G+ N +P
Sbjct: 123 KKLKWIRNIVLVTDGQGDMDADDIEDIAKKINDSGIKLTVLGVDFDNPAYGFKEEDKPPT 182
Query: 166 RVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSE------K 219
+ E+ I + ++ L R + + P + G L L +
Sbjct: 183 KATSEHTLKALINQCEGGTFATMAEAIDELDTPR-VKSVKPYKTYDGALTLGDPEKFPAA 241
Query: 220 MKIKVWVYKKTGEEK---FPTLKKYSDKAPST---------DKFATHEVKVDYEYKSVED 267
M I V Y KT + T+ S++A + D VK YK V D
Sbjct: 242 MNINVERYFKTHLARPLTASTVVVKSEQATQSTQTLEDDPMDGIEFSAVKQARTYK-VND 300
Query: 268 PS-----KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYY 322
P + V E KGY YG V IS +E K + EKS ++GF +
Sbjct: 301 PDAPGGKRDVEFESLAKGYEYGRTAVHISESEHNITKLETEKSFSIVGFIPWTKYEPFLN 360
Query: 323 MKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKI 382
M +V + A ++++ +A+S+L A+ E+ A+ R V + G+ ++V ++ P + +
Sbjct: 361 MGEVCVTHARKNDTKSELALSSLIWALLELESYAVARIVTKDGKDPLLV-LMAPQLELGL 419
Query: 383 NIPDSFYFNVLPFAEDVREFQFPSFSK-FPVSWQ--------PNEQQQEAADNLVKMLDL 433
+ FY LPFAEDVR +QFP + VS Q P+++ +A + V +DL
Sbjct: 420 ---ECFYDIPLPFAEDVRSYQFPPLDRVITVSGQTLKTHRLLPSDELAKAMSDYVDAMDL 476
Query: 434 APSGKGEILQP------ELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTL 487
A G+ E P + T NPA+ R + +++++ H D P
Sbjct: 477 ATYGQDEEGNPAEYASIDETFNPAIHRVNNAVKMRAAHPDKPVP---------------- 520
Query: 488 LAESQSAIDAFCGQFVIKENPKL-KKSTRRFLRE--KPSGSDEPNGDGSVSDAQAVNSME 544
E P + K+ R RE KP S D A+ +
Sbjct: 521 ------------------ETPAIPPKAKGRRTRETVKPI---------SGLDVDALLGED 553
Query: 545 SKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAV 604
+K V+ + P+ DF+ + D D ++ A + M N + L+ +S Y +A
Sbjct: 554 TKRTVSEEN-----PVPDFKRALGTADEMDQIEDAAKQMGNIVRSLITDSFGDSKYAQAT 608
Query: 605 ELLVALRKGCILEQEPKQFNDVLEKVCKIC-------RKRNFSTFFDFLMSKKLSLISKS 657
E L +R+ I EP+ +N + K +R+F +F S +L LI +
Sbjct: 609 ECLGVMREELINMDEPEMYNTFARDLKKALLSGALGGDRRDF--WFKVRWS-RLGLIDQD 665
Query: 658 EAVDSDITDDEA 669
++ S +T +EA
Sbjct: 666 QSEVSKVTHEEA 677
>gi|328769384|gb|EGF79428.1| hypothetical protein BATDEDRAFT_89512 [Batrachochytrium
dendrobatidis JAM81]
Length = 840
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 143/585 (24%), Positives = 231/585 (39%), Gaps = 125/585 (21%)
Query: 209 IFRGDLELS--EKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDY------ 260
++ GDL E + I V Y KT K PT KK+S A D + +DY
Sbjct: 234 VYCGDLTFGTKEDLVIPVTCYLKTSGVKIPTSKKFSMLAEEIDSELRAQYGMDYGAVKLT 293
Query: 261 -EYKSVED--------------PSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKS 305
YK V+ + + PE I+ YRYG V+P S + EA + +KS
Sbjct: 294 KTYKYVDGNDKDSDDASESDSVDASHIHPENVIRAYRYGKAVIPFSIQDEEAAQLLTKKS 353
Query: 306 VKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQG 365
+K++GF + I RHYY+ + + +AL +AM + N VAI R R
Sbjct: 354 IKIIGFIKSDAIPRHYYISGTMAIVPNKDVRGTDIQFTALLQAMTKANIVAIAR-YCRIN 412
Query: 366 QQSVVVGVLTPNVSEK------INIP--DSFYFNVLPFAEDVREFQFP---------SFS 408
GVL +S K I IP D F F V P +D+ P S +
Sbjct: 413 NAKPKFGVL---ISTKKGYGLFIQIPYADDFRFVVAPPIDDLTLATLPKTIQSISTESKT 469
Query: 409 KFPVSWQPNEQQQ----------------------------------------------- 421
VS + EQ
Sbjct: 470 DMLVSIETEEQHNKEKDDSSTTISHHDISDTSSTGQIRYAQEHARYREKFLARKVSPQQA 529
Query: 422 -EAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPP-PLDDSLKK 479
+A D+L+ +D++ G P+ NP +R + ++ H ++ P++ ++K+
Sbjct: 530 FDAVDSLIDAMDISVKSAGTSFNPKHVSNPLYQRLCDCIAYRAIHPNSTDILPVNPTIKR 589
Query: 480 ITEPDPTLLAESQSAIDAFCGQFVIK-----ENPKLKKS-----TRRFLRE---KPSGSD 526
EP L+ ++ AID F IK E PK K R ++ +P+ D
Sbjct: 590 NMEPRQELVEKAMPAIDQLRQAFTIKKVVDVEKPKKSKHVWADLAREMVKSENAEPTVRD 649
Query: 527 EPNGDGSVSDAQAVNSMESKPVV--------------TVDKIGDLTPIQDFEAMMSRRDC 572
P D S++ +S +P+ VD I L P+ +F++M+SR D
Sbjct: 650 HPADDTVASESTKASSYIGQPLSLSTHPATVKHITQRAVDTISTLDPVSEFQSMVSRSD- 708
Query: 573 PDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFN----DVLE 628
++V++A+ M + + L+ S Y KA L ALR C+ P +N D+
Sbjct: 709 GNYVEQAMTQMCHIVKTLIAESIGQAFYAKAFAALKALRVECVRHSNPSVYNALMRDLKT 768
Query: 629 KVCKICRKRNFSTFFDFLMSKKLSLISKSEAVDSDITDDEAGSFI 673
+V R+ + ++ + SLI+++E+ S ++ EA F+
Sbjct: 769 EVQSGLLSRDHGLVWKLIVDQGESLITQTESCVSLVSHREAVEFL 813
>gi|70989095|ref|XP_749397.1| Ku family DNA helicase [Aspergillus fumigatus Af293]
gi|74669251|sp|Q4WI96.1|KU80_ASPFU RecName: Full=ATP-dependent DNA helicase II subunit 2; AltName:
Full=ATP-dependent DNA helicase II subunit Ku80
gi|66847028|gb|EAL87359.1| Ku family DNA helicase, putative [Aspergillus fumigatus Af293]
gi|159128812|gb|EDP53926.1| Ku family DNA helicase, putative [Aspergillus fumigatus A1163]
Length = 725
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 153/685 (22%), Positives = 289/685 (42%), Gaps = 79/685 (11%)
Query: 41 KNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDY 98
K +GVI T+ET NEL + ++H+ V +I+ ++ L L P T GD
Sbjct: 49 KTATIGVIGLKTDETSNELDDD-PHFKHISVFTEIQQFLMPDIRRLGALVKPSETDKGDA 107
Query: 99 M--------LIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRM 150
+ +I Y + K K+ + L+T+ + + D+ ++ +V G
Sbjct: 108 ISAIILAIQMIVTYCKKLKYKRKIVLVTNGQGWMSNEDLDQITKKIKEDNIDLVVLGTDF 167
Query: 151 KNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIF 210
+ G+ + EN+ LL + + ++ S + + + V F
Sbjct: 168 DDPEYGFKEEGKDPRKA--ENEALLRGLVEDCNGAFGTLEQAVSEMDIPRAKRVRTVATF 225
Query: 211 RGDLELSE------KMKIKVWVYKKTGEEKFPTLKKY---SDKAPSTDKFATHEVKVD-- 259
+G L+L ++I V Y +T K P+ + SD ++ + ++
Sbjct: 226 KGFLQLGNPEEYDTALRIPVERYYRTYVAKPPSASSFVLRSDVGAEGEQGESSQLPKSPP 285
Query: 260 --------YEYKSVEDPSKVVPP-------EQRIKGYRYGPQVVPISSAEWEAVKFKPEK 304
++ E P + P E+ KGY YG V IS + +
Sbjct: 286 EGGALTSVRNLRTYEVPDENAPGGKFDVEREELAKGYEYGRTAVHISETDENITTLETYA 345
Query: 305 SVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQ 364
+++L+GF R+ +M N+ I + GN +A++A+S+ A+ E+ A+ R V ++
Sbjct: 346 ALELVGFIQTDKYDRYMHMSTTNIIIGQRGNDKASLALSSFIHALFELECYAVARLVVKE 405
Query: 365 GQQSVVVGVLTPNVSEKINIPD--SFYFNVLPFAEDVREFQFPSFSK-FPVSWQ------ 415
+ V+V +L P++ PD LPFAEDVR ++FP K VS +
Sbjct: 406 NKPPVMV-LLAPSIE-----PDYECLLEVQLPFAEDVRTYRFPPLDKVITVSGKVVTEHR 459
Query: 416 --PNEQQQEAADNLVKMLDLAPSGKG----EILQPELTPNPALERFYHHLELKSEHQDAA 469
PN+ +A V ++L + + E L + + +P L R + ++ H D
Sbjct: 460 NLPNKDLLDAMSEYVDSMELVDTDETGNPVEGLPIDDSFSPVLHRIDSAIRYRAIHPDDP 519
Query: 470 PPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKE-NPKLKKSTRRFLREKPSGSDEP 528
P +L K+++P L+ +S++ + +K+ PK+K R EKP
Sbjct: 520 VLPPSKNLTKLSQPPQDLVEKSKAYLQKLMEAADVKKVPPKVKGRKRIRESEKPL----- 574
Query: 529 NGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIF 588
S D A+ E + +I I +F+ +++ + + + A++ M + I
Sbjct: 575 ----SGLDVDALLHQEKRA-----RISPTNAIPEFKQTLTQAETIETIKDAVKQMTSIIE 625
Query: 589 GLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFS----TFFD 644
++NS NY + +E + +R+ I +EP +ND L ++ K +
Sbjct: 626 DQIKNSLGDANYDRVIEEMGVMREELISFEEPALYNDFLRQLKDKLLKEELGGDRRELWW 685
Query: 645 FLMSKKLSLISKSEAVDSDITDDEA 669
L +L LI++ E+ SD+T+++A
Sbjct: 686 LLRRSQLGLINQRESDQSDVTEEQA 710
>gi|392596993|gb|EIW86315.1| SPOC domain-like protein [Coniophora puteana RWD-64-598 SS2]
Length = 822
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 186/825 (22%), Positives = 332/825 (40%), Gaps = 173/825 (20%)
Query: 9 LLLLDVSPSMHSV----LP----------DVEKLCSRL------IQKKLIYG-KNHEVGV 47
+ L+D+SPSM LP +V L L IQ + +G K + GV
Sbjct: 12 MFLVDISPSMVETRIVDLPPGPTGEERTREVSSLEYSLQYVKLRIQDMIFHGRKTEQCGV 71
Query: 48 ILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGD----YMLIKK 103
I+FG+++T N + ++ GGY+HV I + + L L +GD ++ +
Sbjct: 72 IIFGSDDTHNVVNEKNGGYDHVTEFIPIGQPNATTLAKLDTLKPSETSGDPIDALIVAIE 131
Query: 104 YGETYKGKKH-----LCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRAS 158
+ Y KK + L+TD P++ D +++ + + G+ + +
Sbjct: 132 TQDQYLEKKRTWTRKIVLLTDGKNPMEIEDWEATVHKMNALHISLDVVGIDFDDEEIGYQ 191
Query: 159 LSGEPHMRVIIENDNLLNIF-SKKSSAKTLFVDSTTSLRGARKTRDISPV---TIFR-GD 213
G+ +++ EN+ F S S+ + + R + +D T+ R GD
Sbjct: 192 EEGKKNIK--FENEAFYAKFTSSLSNGEVGTFEKALQERYRPEPKDTKSTLMGTMLRLGD 249
Query: 214 LEL--SEKMKIKVWVYKKTGEEKFPTLKKYSD----KAPSTDKFATHEVKVDYEYKSV-- 265
+++ E M++ V K T E+ + KK++ K + D+ + +VD + K+V
Sbjct: 250 VDVRPDEAMEVLVKTSKCTMLERPKSWKKFARRQAVKQDAEDETQDVDGQVDEDKKTVFS 309
Query: 266 --------------------------------EDPSKVVPPEQRIKGYRYGPQVVPISSA 293
++ + V EQ I+G++YG P
Sbjct: 310 QLRMRTEYYVDHSESKDDTDDEDNEEGEDVKKKNAPEKVEKEQLIRGFKYGATYAPCPDG 369
Query: 294 EWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMN 353
++ K +K + + GF N R + M +V A+P ++ V +S++ +AM + +
Sbjct: 370 QFP--KLPTKKGIDICGFFHRQNFRRDFSMGEVQYVWADPSSALQQVTLSSVVQAMADKD 427
Query: 354 KVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKF--- 410
+AI R V R G +GVL P+ +K+ D + +PFA+DVR++ F
Sbjct: 428 VLAIARWVMRDGADP-KMGVLCPSQFDKV---DCLLWVQMPFADDVRKYTFAPLEHLVSK 483
Query: 411 ---PVS---WQPNEQQQEAADNLVKMLDLAPSGKGE-------ILQPELTPNPALER--- 454
P++ + P +Q A +N V +DL +G+ + L+ NPA+ R
Sbjct: 484 KGDPITTHPYLPTSEQMSAMENFVDAMDLMDAGEKDEDGHRQPWFDTRLSYNPAIHRTKQ 543
Query: 455 -FYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKS 513
YH + + PP + L +P + ++ A++ F +KE P K++
Sbjct: 544 ALYHSAIVNDVVSNPLAPPHPE-LVMYFDPPKRAVKRAREAVEECQTVFKVKEIP--KRA 600
Query: 514 TRRFLRE--------------------KPSGSD------EPNGDGSVSDAQAVNSMESK- 546
+R ++ KPS S+ EP + DA A + ES+
Sbjct: 601 AKRARKDGHVRARDDDEEMLLLDLKGPKPSASESQTTSQEPYTNQVSEDADAGSETESED 660
Query: 547 -----------------------PVVTVDK-------IGDLTPIQDFEAMMSRRDCPDWV 576
VD IG P+QDF+ +++ D V
Sbjct: 661 EELLLDQPKSGAKANPPPTPARLASTDVDPGRERGRIIGTTYPLQDFKKNIAQGDL---V 717
Query: 577 DKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRK 636
KA+EDM I ++ + + + L ALR+ C+ E E +N L + + C
Sbjct: 718 TKAVEDMAYVIKEIVLRPFASRRHKELISCLTALRETCLKEDEIDAWNKFLRDLKESCLS 777
Query: 637 RNFSTFFDFLMSKK---LSLISKSEAVD----SDITDDEAGSFIV 674
+ F + K +SLIS EA + SDI++ A +FI+
Sbjct: 778 PPGNPAFWAEVKKSGRGMSLISSPEAANLGGVSDISESTASNFIM 822
>gi|317147298|ref|XP_003189905.1| ATP-dependent DNA helicase II subunit 2 [Aspergillus oryzae RIB40]
Length = 722
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 165/742 (22%), Positives = 306/742 (41%), Gaps = 99/742 (13%)
Query: 5 REALLLLLDVSPSMHSV-----LPDVE----KLCSRLIQKKLIYGKNHEVGVILFGTEET 55
+EA + ++DV SM + D+E + R+ K +GVI T+ET
Sbjct: 4 KEATVYIVDVGRSMGECRNGRSVTDLEWAMQYVWDRITGTVATGRKTAMMGVIGLRTDET 63
Query: 56 ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL-----PQGTCAGDYM--------LIK 102
NEL +V + H+ VL ++K L+ ++ L P T GD + +I
Sbjct: 64 SNELEDDVH-FSHIAVLSNLK---QFLMPDIRKLEDELKPSKTDKGDAISAIILAIQMII 119
Query: 103 KYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVV-RASLSG 161
+ + K ++ + L+T+ + D D+G +V ++V G+ +
Sbjct: 120 THCKKLKYRRKIVLVTNGQGRMSDEDLGEIVKKVKEDNIELVVMGIDFDDPEYGYKEEDK 179
Query: 162 EPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSE--- 218
+PH EN+ LL + + + + + + V F+G L+L
Sbjct: 180 DPHK---AENETLLRTLVEDCDGVYGTFEQAVAELDIPRVKSVRSVASFKGYLQLGNPEE 236
Query: 219 ---KMKIKVWVYKKTGEEKFPTLKKY---------------------SDKAPSTDKFATH 254
++I V Y +T K PT + + K +
Sbjct: 237 YDSALRIPVERYYRTYPAKPPTASSFVLRSEPEAGQEEAESSEAAAATQKGSQSGDAGLT 296
Query: 255 EVKVDYEYKSVEDPS----KV-VPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLL 309
V+ Y+ VED S K+ + ++ KGY YG V IS + ++L+
Sbjct: 297 TVRTMRTYQ-VEDKSAPGGKIDIERDELAKGYEYGRTAVHISETDENITILDTFAGLELM 355
Query: 310 GFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSV 369
GF R+ +M + N+ IA+ N +A +A+S+ A+ E+ A+ R V ++ + V
Sbjct: 356 GFIQTDQYQRYMHMSNTNIIIAQRANDKAALALSSFIHALFELECYAVARLVVKENKPPV 415
Query: 370 VVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK-FPVSWQ--------PNEQQ 420
+V +L P++ + + LPFAEDVR ++FP K VS + P++
Sbjct: 416 IV-LLAPSIEPEY---ECLLEVQLPFAEDVRTYRFPPLDKVITVSGKVVTQHRNLPSDDL 471
Query: 421 QEAADNLVKMLDLAPSGKG----EILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDS 476
+ V ++L + + E + + +P L R + ++ H D PP +
Sbjct: 472 LDVMGKYVNSMELVDADEDGDPVETFPIDDSYSPVLHRIDAAIRARAIHPDQPIPPPSER 531
Query: 477 LKKITEPDPTLLAESQSAIDAFCGQFVIKE-NPKLKKSTRRFLREKPSGSDEPNGDGSVS 535
L K + P L+ +SQ ++ +K+ PK K R EKP S
Sbjct: 532 LTKFSHPREDLIEKSQKHLEKLIEIADVKKVPPKAKGRKRTRETEKPL---------SGL 582
Query: 536 DAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSN 595
D A+ E + KI I +F+ +++ + + + A + M + +++S
Sbjct: 583 DVDALLHHEKRV-----KISPNNAIPEFKQTLAQAENIEAIKDATKQMMVIVEDQIKHSL 637
Query: 596 EGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVC-KICRKR---NFSTFFDFLMSKKL 651
NY + +E L +R + +EP +ND L ++ K+ +++ + + + KL
Sbjct: 638 GNANYDRVIEALGTMRDELVSYEEPASYNDFLGQLKDKLLQEKLGGDRQELWWLVRRNKL 697
Query: 652 SLISKSEAVDSDITDDEAGSFI 673
L+++ E+ S +TD EA F+
Sbjct: 698 GLVTQRESDQSRVTDTEAKEFM 719
>gi|238496249|ref|XP_002379360.1| Ku family DNA helicase, putative [Aspergillus flavus NRRL3357]
gi|220694240|gb|EED50584.1| Ku family DNA helicase, putative [Aspergillus flavus NRRL3357]
Length = 742
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 166/755 (21%), Positives = 307/755 (40%), Gaps = 116/755 (15%)
Query: 5 REALLLLLDVSPSMHSV-----LPDVE----KLCSRLIQKKLIYGKNHEVGVILFGTEET 55
+EA + ++DV SM + D+E + R+ K +GVI T+ET
Sbjct: 4 KEATVYIVDVGRSMGECRNGRSVTDLEWAMQYVWDRITGTVATGRKTAMMGVIGLRTDET 63
Query: 56 ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL-----PQGTCAGDYM--------LIK 102
NEL +V + H+ VL ++K L+ ++ L P T GD + +I
Sbjct: 64 SNELEDDVH-FSHIAVLSNLK---QFLMPDIRKLEDELKPSKTDKGDAISAIILAIQMII 119
Query: 103 KYGETYKGKKHLCLITDALCPLKDPDVG-----TKEDQVSTIARQMVAFGLRMKNIVVRA 157
+ + K ++ + L+T+ + D D+G KED + + ++ + + K + +
Sbjct: 120 THCKKLKYRRKIVLVTNGQGRMSDEDLGEIVKKVKEDNIELVVMSVICYQIATKQKLTSS 179
Query: 158 -------------SLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDI 204
+PH EN+ LL + + + + + +
Sbjct: 180 RGIDFDDPEYGYKEEDKDPHK---AENETLLRTLVEDCDGVYGTFEQAVAELDIPRVKSV 236
Query: 205 SPVTIFRGDLELSE------KMKIKVWVYKKTGEEKFPTLKKY----------------- 241
V F+G L+L ++I V Y +T K PT +
Sbjct: 237 RSVASFKGYLQLGNPEEYDSALRIPVERYYRTYPAKPPTASSFVLRSEPEAGQEEAESSE 296
Query: 242 ----SDKAPSTDKFATHEVKVDYEYKSVEDPS----KV-VPPEQRIKGYRYGPQVVPISS 292
+ K + V+ Y+ VED S K+ + ++ KGY YG V IS
Sbjct: 297 AAAATQKGSQSGDAGLTAVRTMRTYQ-VEDKSAPGGKIDIERDELAKGYEYGRTAVHISE 355
Query: 293 AEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEM 352
+ ++L+GF R+ +M + N+ IA+ N +A +A+S+ A+ E+
Sbjct: 356 TDENITILDTFAGLELMGFIQTDQYQRYMHMSNTNIIIAQRANDKAALALSSFIHALFEL 415
Query: 353 NKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKF-- 410
A+ R V ++ + V+V +L P++ + + LPFAEDVR ++FP K
Sbjct: 416 ECYAVARLVVKENKPPVIV-LLAPSIEPEY---ECLLEVQLPFAEDVRTYRFPPLDKVIT 471
Query: 411 ----PVSWQPNEQQQEAAD------NLVKMLDLAPSGKG-EILQPELTPNPALERFYHHL 459
V+ N + D N ++++D G E + + +P L R +
Sbjct: 472 VSGKVVTQHRNLPSDDLLDVMGKYVNSMELVDADEDGDPVETFPIDDSYSPVLHRIDAAI 531
Query: 460 ELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKE-NPKLKKSTRRFL 518
++ H D PP + L K + P L+ +SQ ++ +K+ PK K R
Sbjct: 532 RARAIHPDQPIPPPSERLTKFSHPREDLIEKSQKHLEKLIEIADVKKVPPKAKGRKRTRE 591
Query: 519 REKPSGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDK 578
EKP S D A+ E + KI I +F+ +++ + + +
Sbjct: 592 TEKPL---------SGLDVDALLHHEKRA-----KISPNNAIPEFKQTLAQAENIEAIKD 637
Query: 579 AIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVC-KICRKR 637
A + M + +++S NY + +E L +R + +EP +ND L ++ K+ +++
Sbjct: 638 ATKQMMVIVEDQIKHSLGDANYDRVIEALGTMRDELVSYEEPASYNDFLGQLKDKLLQEK 697
Query: 638 ---NFSTFFDFLMSKKLSLISKSEAVDSDITDDEA 669
+ + + KL L+++ E+ S +TD EA
Sbjct: 698 LGGDRQELWWLIRRNKLGLVTQRESDQSRVTDTEA 732
>gi|408398938|gb|EKJ78063.1| Ku70 [Fusarium pseudograminearum CS3096]
Length = 714
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 162/682 (23%), Positives = 283/682 (41%), Gaps = 78/682 (11%)
Query: 45 VGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDYM--- 99
VGV+ T++T N+L + GYE++ VLQ++ + ++ L+ + P T AGD +
Sbjct: 53 VGVLGLRTDDTYNKLQDD-DGYENITVLQEMGSMTMSSLRDLQSVVKPSNTWAGDAVSAI 111
Query: 100 -----LIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV 154
++ + + K + + LITD P+ D+ +++ Q+ G+ +
Sbjct: 112 VVAVDMMDTFTKKLKWNRKIFLITDGQGPMDGDDLSDISKKINDSNIQLTILGVDFDDPD 171
Query: 155 VRASLSGEPHMRVIIENDNLLNIFSK--KSSAKTLFVDSTTSLRGARKTRDISPVTIFRG 212
+P + +N+ L + K ++ L R + + P + G
Sbjct: 172 YGFKEEDKPGTKE--DNEKALKALADDCKDGVFANIAEAIDELDTPR-IKAVKPYKTYDG 228
Query: 213 DLELSE------KMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVD----YEY 262
L L + M I V Y KT + T K S D AT + + D E+
Sbjct: 229 ALTLGDPETFPAAMSINVERYFKTHLARPLTASTVVVK--SEDGEATQQTQDDEMEGIEF 286
Query: 263 KSVE--------DPS-----KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLL 309
+V+ DP + V + KGY YG V IS +E K +KS ++
Sbjct: 287 SAVKQARSYKVNDPDAPGGKRDVEFDDLAKGYEYGRTAVHISESEHNITKIDAQKSFSII 346
Query: 310 GFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSV 369
GF + + + + IA ++++ +A+S+L A+ E+ AI R V + G+ +
Sbjct: 347 GFIPCAKYEPFLNIGETCVTIARKFDAKSAIALSSLVWALSELESYAIARIVTKDGKDPL 406
Query: 370 VVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK-FPVSWQ--------PNEQQ 420
+V +L P V + + Y LPFAED+R +QFP + V+ Q P ++
Sbjct: 407 LV-LLAPGVEPDM---ECLYDIPLPFAEDIRSYQFPPLDRVITVTGQTVSKHRLLPTDEL 462
Query: 421 QEAADNLVKMLDLAPSGKGEILQP-ELTP-----NPALERFYHHLELKSEHQDAAPPPLD 474
+A + V +DL+ G + P E P NP + R H ++ ++ + + P
Sbjct: 463 NDAMSDYVDAMDLSTYGMDDDGNPSEYVPIDETFNPTVHRVNHAVKARAVYPEKPVPDTP 522
Query: 475 DSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSV 534
L + +P L+ + QS DA +K+ P K R KP S
Sbjct: 523 SILLRFAQPTQDLIEKVQSKTDALIQAADVKKVPPKVKGKRGRETIKPI---------SG 573
Query: 535 SDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENS 594
D A+ E K ++ D + +F+ ++ + ++ A + M I + S
Sbjct: 574 LDVDALLGEEKKSEISSDN-----AVPEFKRALAVTEDVSEIEDATKQMGTIISTFVTES 628
Query: 595 NEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFST-FFDFLMSKK--- 650
G YP+A+E L +R+ I +EP +N L + K + DF +
Sbjct: 629 FGGDKYPRALECLGVMREELINLEEPGFYNTFLRGMKKKLLSEDMGGRRLDFWFKVRLGH 688
Query: 651 LSLISKSEAVDSDITDDEAGSF 672
L LI ++ SD+T DEA F
Sbjct: 689 LGLIDNKQSDVSDVTPDEAVEF 710
>gi|449304532|gb|EMD00539.1| hypothetical protein BAUCODRAFT_172807 [Baudoinia compniacensis
UAMH 10762]
Length = 729
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 161/695 (23%), Positives = 284/695 (40%), Gaps = 77/695 (11%)
Query: 41 KNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKH--LPQGTCAGDY 98
K GV+ T+ T N L E Y ++ V QDI V V+ L+ + T AGD
Sbjct: 49 KTAMAGVVGLRTDGTSNFLESE-SEYANITVFQDIGQVFMAQVRRLRGELVVSSTDAGDA 107
Query: 99 M--------LIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRM 150
M +I + K ++ + LITDA ++ D+ +++ A Q+V G+
Sbjct: 108 MSALIIAIQMIVNTCKKLKYERKIVLITDARGSMQADDLEAVVEKLKEDATQLVVLGVDF 167
Query: 151 KNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIF 210
+ +P + EN+ +L + + + + + P +
Sbjct: 168 DDPEYGFKEEDKPTSKA--ENEAILKQLCQDCGGTFGTLAQAVDELSVPRVKSVRPTPSY 225
Query: 211 RGDL------ELSEKMKIKVWVYKKTGEEKFPTLKKY---SDKAPSTDKFATHEV----- 256
+G L E + I V Y KT + ++ SD APS AT +
Sbjct: 226 KGSLTLGNPQEFDTALSIDVERYPKTMTAPAQSASRFVVRSDLAPSEVMQATQTLDGEAA 285
Query: 257 -------------KVDYEYKSVEDPS--KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFK 301
+ Y+ P + + ++ KGY YG V IS ++ ++
Sbjct: 286 PNGYSEGLSAVKNALSYQVDDENAPGGKRDIDRDELAKGYEYGRTAVHISESDRNVTTYE 345
Query: 302 PEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCV 361
S ++GF D S R M L IA+ GN +A +A+S+ A+ E+ A+ R V
Sbjct: 346 TVPSFDIIGFVDKSQYERWMDMTRAALTIAQRGNDKAIMALSSFIHALYELESYAVARLV 405
Query: 362 WRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK-FPVSWQ----- 415
++ + +V ++ P + + + Y LPF ED+R ++FP + VS +
Sbjct: 406 KKENNEPRIV-LVAPCIEPDL---ECLYDVELPFTEDLRSYKFPPLDRIITVSGKELKVH 461
Query: 416 ---PNEQQQEAADNLVKMLDLAPSGKGEILQP-ELTP-----NPALERFYHHLELKSEHQ 466
PNE Q A + V +DLA G + +P E P +P L R ++ ++
Sbjct: 462 RNLPNEDLQAAMSDYVDSMDLATFGTNDEGEPTEYMPMDETFSPMLHRIQQVIKHRAVFP 521
Query: 467 DAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSD 526
++ PPP D L + + L+ +S+SA+ +K+ P K RRF R K +
Sbjct: 522 ESEPPPPADVLVRYSHSPAELVQQSKSALSRVVKAADVKKVPP-KARGRRFGRGKE--AP 578
Query: 527 EPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCP---DWVDKAIEDM 583
+P D V A + + + D I +F+ ++ +D D V A +
Sbjct: 579 KPLSDLDVGALLAKDMKRKRRRIDPD-----NAIPEFKQLIDAQDTEEALDVVHDACKQF 633
Query: 584 KNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKV-CKICRKR---NF 639
K+ I +++S Y +A+E + +R+ E FN+VL + K+
Sbjct: 634 KDIICDWIKHSVGNSGYGRAIEGIRVMRENMAEIDEAGFFNEVLRDIKAKLLGGELGDGR 693
Query: 640 STFFDFLMSKKLSLISKSEAVDSDITDDEAGSFIV 674
S + + KL L+ +A + ++ +EA +F+
Sbjct: 694 SEMWYMVRVNKLGLLQDQDATNG-VSAEEAKAFLT 727
>gi|212542999|ref|XP_002151654.1| Ku family DNA helicase, putative [Talaromyces marneffei ATCC 18224]
gi|210066561|gb|EEA20654.1| Ku family DNA helicase, putative [Talaromyces marneffei ATCC 18224]
Length = 722
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 172/749 (22%), Positives = 315/749 (42%), Gaps = 128/749 (17%)
Query: 5 REALLLLLDVSPSM--HSVLPDVEKL--CSRLIQKKLIYG-----KNHEVGVILFGTEET 55
+EA + ++DV SM H+ D+ L R + K+ K +GV+ T+ET
Sbjct: 4 KEATVYIVDVGKSMKQHNNGRDISDLDWAMRYVWDKITTTVATGRKTATIGVVGLKTDET 63
Query: 56 ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL-----PQGTCAGDYM--------LIK 102
+ L + GYE++ V+Q + + L+ ++ L P T GD + +I
Sbjct: 64 KVPLEDD-EGYENISVMQGLGQM---LMPDIRRLREEIKPSETDEGDAISSLIVAIQMIN 119
Query: 103 KYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVV------- 155
Y + K K+ + L+T+ + D + IA ++ A + + + V
Sbjct: 120 VYTKKLKYKRKIYLVTNGKGAIS-------SDGLEDIASKLKADNIELIVLGVDFDDPDY 172
Query: 156 --------RASLSGEPHMRVIIEN-DNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISP 206
E +R ++E+ D + ++ + L + +RG
Sbjct: 173 GFKEEDKDEGKAENEALLRGLVEDCDGVYGTLAQ--AIAELDIPRVKVVRG--------- 221
Query: 207 VTIFRGDLELSEKM------KIKVWVYKKTGEEKFPTLKKYSDKA------PST------ 248
V FRGDL L M +I+V Y +T K P+ + K PST
Sbjct: 222 VPSFRGDLRLGNPMQYDTALRIQVERYYRTYVAKPPSTSSFVVKTGGDASQPSTQTLEAS 281
Query: 249 -DKFATHEVKVDYEYKSVEDPSKV-----VPPEQRIKGYRYGPQVVPISSAEWEAVKFKP 302
D A + V+DP V + ++ KGY YG VPIS ++ K +
Sbjct: 282 KDADANLTSVRNVRTYHVDDPQVVGGKRELERDELAKGYEYGRTAVPISESDENITKLET 341
Query: 303 EKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVW 362
+++L+GF A + R M N+ IA+ N +A +A+S+L A+ E++ AI R V
Sbjct: 342 MAALELIGFIQADHYDRFMNMSTSNVIIAQKTNEKAALALSSLIHALFELDCYAIARLVT 401
Query: 363 RQGQQSVVVGVLTPNVSEKINIPD--SFYFNVLPFAEDVREFQFPSFSK-FPVSWQ---- 415
+ G+ ++V +L P + PD LPF+EDVR ++FP + +S +
Sbjct: 402 KDGKSPLIV-LLAPLID-----PDYECLLEVQLPFSEDVRSYKFPPLDRVITISGKEVKE 455
Query: 416 ----PNEQQQEAADNLVKMLDLAPSG-KGEILQP---ELTPNPALERFYHHLELKSEHQD 467
P+E A V ++L +GEI++ E +P L R + ++ H D
Sbjct: 456 HRNLPSEDLVNAMSKYVDSMELIDKDEEGEIVETIPMEDNYSPLLHRIEQAVRWRAIHPD 515
Query: 468 AAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDE 527
PP + L ++++P + +Q +D +K+ P K R++ D+
Sbjct: 516 EPVPPPSERLTRLSKPPKEVQERAQKYLDRIIRAADVKKVPPKAKG-----RKRNRDVDK 570
Query: 528 PNGDGSVSDAQAVNSMESKPVVTVDKIGDLTP---IQDFEAMMSRRDCPDWVDKAIEDMK 584
P ++ ++ ++ +K ++P I +F+ M++ + + + A M+
Sbjct: 571 P-----------LSGLDIDELLHREKRAKISPTNAIPEFKQMLATAETVETIKDATSQMQ 619
Query: 585 NKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVL----EKVCKICRKRNFS 640
I + S NY + VE L LR+ I +EP +N+ + EK+ +
Sbjct: 620 KIIEDHIRTSFGDSNYDRVVEELGVLREELIDYEEPGLYNEFVQPLKEKILTEKLGGDRQ 679
Query: 641 TFFDFLMSKKLSLISKSEAVDSDITDDEA 669
+ + K+ LI K+ + S+++++EA
Sbjct: 680 ELWWLIRRSKIGLIDKATSDQSEVSEEEA 708
>gi|407417188|gb|EKF37990.1| KU80 protein, putative [Trypanosoma cruzi marinkellei]
Length = 746
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 150/732 (20%), Positives = 312/732 (42%), Gaps = 83/732 (11%)
Query: 5 REALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENE----LT 60
R A + LD++ S L + C R + +++ + E+ ++L GT + N
Sbjct: 4 RSASVFALDLNCPPAS-LALAAEFCRRSAETTMMFAPHDEMALVLAGTCDPHNPPQHGQN 62
Query: 61 KEVGG--YEHVKVLQDIKVVDGHLVQSLKHL-----PQGTCAGDYM--------LIKKYG 105
E GG ++++ V + ++ L H+ P G D++ ++++
Sbjct: 63 DEKGGERFKYISVPCALAAPTVEFLEPLAHITPPPPPCGRHEVDFLETLFVCDHVLRERT 122
Query: 106 ETYKGKKHLCLITDALCPL-KDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPH 164
++ + LITDA + + D+ T + + +V G+ V + E
Sbjct: 123 ANKCYQRVVYLITDAHTDVARKDDMNTLLESFQQLGVSLVVIGIDFTETSVDTTDDEERD 182
Query: 165 MRVII------ENDNLLNIFSKKSSAKTLFVDSTTSLRGAR--KTRDISPVTIFRGDLEL 216
+ + +N+ +L++ +++ V +L+ + + R I+P + R L +
Sbjct: 183 DKSLTDLPLKAQNERVLHVMCSLLGEESMVVSLEEALQEVQELRRRKITPRALVRVVLSI 242
Query: 217 SEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQ 276
+ +++ ++ K EE+ PT+K+ + EV + ++ + + + E
Sbjct: 243 GD-VRLATQMFTKAQEERLPTMKRMTANG--------EEVYMKIIFQDFSEDATPLRKED 293
Query: 277 RIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNS 336
+KGY YG +VP + + A+K K +++ +GF + + + V + + +
Sbjct: 294 LLKGYHYGRSLVPCAGEDVGAMKIKGPRAMDAVGFVPIQQVPAYVLLGGVKVIMPLADDM 353
Query: 337 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFA 396
A ++ RA+ N+ IVR V R ++G+ P+ +E+ D +F+ LP+A
Sbjct: 354 VGAKAFRSIVRAIAAANRAMIVRFV-RTRDADPILGLCVPSTNEQ---RDVLFFSPLPYA 409
Query: 397 EDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFY 456
EDVR F+F + + ++ +EA L+ + + +L+P T NP ++++Y
Sbjct: 410 EDVRFFEFSDYKGMWGTDSADDDGEEA--RLLAAIVEDMTVDKLVLRPRETFNPVIQQYY 467
Query: 457 HHLELK-----------SEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIK 505
L K + L + +L AI+A F +
Sbjct: 468 ATLRAKLRLFCDGREGVGGKESCGAGELRREKHGDKNTNGEVLLPLVGAIEATSAAFGVP 527
Query: 506 ENP----------KLKKSTRRFL----REKPSG---------SDEPNGDGSVSDA--QAV 540
N KL+ R F+ RE S + D SDA +A
Sbjct: 528 GNQLEPVLSSVREKLEACARSFVYVSNRENCVADERQSYRFHSPAASHDVVASDASTRAP 587
Query: 541 NSMESKPVVT-VDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGIN 599
+++ + ++ +I + P+ F+A++ R+ V A++++ + +F LL S
Sbjct: 588 STVATPCFISGASQITTVDPVYSFKAIVQAREGVK-VRLAMDELGDIVFKLLRCSLGDAQ 646
Query: 600 YPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFF-DFLMSKKLSLISKSE 658
Y K E ++ LR+ C+ E E FND L K+ + R+ + F+ + ++++ ++ I+K E
Sbjct: 647 YAKCTECVLVLRQHCVKEGEAAYFNDFLLKLMLMARELDHDLFWKNGILARGIAPITKRE 706
Query: 659 AVDSDITDDEAG 670
+S + D+EA
Sbjct: 707 CPNSTMDDEEAA 718
>gi|325089084|gb|EGC42394.1| conserved hypothetical protein [Ajellomyces capsulatus H88]
Length = 723
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 171/750 (22%), Positives = 325/750 (43%), Gaps = 118/750 (15%)
Query: 5 REALLLLLDVSPSMHSV-----LPDVEKLCSRLIQKKLIYG-----KNHEVGVILFGTEE 54
+EA + ++DV SM + D++ R I K+ K +GVI T++
Sbjct: 4 KEATVYIVDVGKSMGECHNGRSISDLD-WAMRYIWDKITTTVATGRKTVTLGVIGLKTDD 62
Query: 55 TENELTK--EVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDYM--------LIK 102
+ N L + E Y ++ V QDI + ++ L+ L P T GD + +I
Sbjct: 63 SNNPLWEKDEEESYANISVFQDISQILMPQIRELRELIKPSHTLEGDAISSLILAIDMIV 122
Query: 103 KYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQ---MVAFGLRMKNIVVRASL 159
+Y + K K+ + LITD + D+ + VS I + +V G+ +
Sbjct: 123 RYCKKLKYKRKIVLITDGTGAM---DIDGIDGIVSKINEENIELVILGVDFDD--PEYGF 177
Query: 160 SGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLEL--- 216
E + +N++ L + ++ S +T+ + + F+GDL L
Sbjct: 178 KEEDKEPLKAKNESHLKQLVEDCEGMFGTLEHAISEMEIPRTKVVRSMPTFKGDLRLGDP 237
Query: 217 ---SEKMKIKVWVYKKT-------------------GEEKFPTLKKYSDKAPSTDKFA-- 252
S + I+V Y +T G+E + + K PS ++ A
Sbjct: 238 DQYSSALTIQVERYYRTYAARPPVASSFVSSSALSEGQETAQSSATIATKEPSQERGAGA 297
Query: 253 ----------THEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKP 302
T++V + K + V ++ KGY YG V IS ++ K +
Sbjct: 298 ASLTAVRNARTYQV----DDKGAAGGKRDVARDELAKGYEYGRTAVHISESDENITKLET 353
Query: 303 EKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVW 362
E +++ +GF + N R+ M N+ IA+ N++A +A+S++ A+ E+ A+ R V
Sbjct: 354 EAALEFIGFIPSDNYDRYMNMSTSNIIIAQKTNNKAILALSSIIHALFELECYAVARLVP 413
Query: 363 RQGQQSVVVGVLTPNVSEKINIPD--SFYFNVLPFAEDVREFQFPSFSK-FPVSWQP-NE 418
+ G+ +VV +L P++ PD LPFAED+R ++FP K VS + E
Sbjct: 414 KAGKSPLVV-LLAPSIE-----PDYECLLEVQLPFAEDMRSYRFPPLDKVVTVSGKTVTE 467
Query: 419 QQQEAADNLV-KMLDLAPSGK-------GEILQP---ELTPNPALERFYHHLELKSEHQD 467
+ +D+L+ +M + S + GE ++ E + +P L R H + ++ H
Sbjct: 468 HRNLPSDSLLSRMAEYVDSLEHTEKDEDGETIESMSIENSFSPLLHRIDHAIRWRAVHPS 527
Query: 468 AAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDE 527
PP+ + L+K++ L A+S++ + +K+ P K R++ D+
Sbjct: 528 EPFPPVPEILQKLSRQPEDLQAQSENTLANLIATSDVKKVPPKAKG-----RKRDREIDK 582
Query: 528 PNGDGSVSDAQAVNSMESKPVVTVDKIGDLTP---IQDF-EAMMSRRDCPDWVDKAIEDM 583
P ++ + + ++ +K ++P I +F ++++S +D D V A++ M
Sbjct: 583 P-----------LSGLNVEELLQTEKRVKISPDNAIPEFKQSLVSSQDL-DAVKDAVKQM 630
Query: 584 KNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFS--- 640
+ I + +S NY +AVE L +++ + +EP +ND + + +
Sbjct: 631 SSIIESQIRHSLGDANYDRAVEGLGTMKEELVAFEEPTLYNDFIRNLKTKLLGNDLGGDR 690
Query: 641 -TFFDFLMSKKLSLISKSEAVDSDITDDEA 669
+ ++ +L LI K + SD+T++EA
Sbjct: 691 REMWWYIRKNRLGLIDKRLSELSDVTEEEA 720
>gi|407924294|gb|EKG17347.1| Ku70/Ku80 arm [Macrophomina phaseolina MS6]
Length = 725
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 157/702 (22%), Positives = 294/702 (41%), Gaps = 110/702 (15%)
Query: 47 VILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL-----PQGTCAGDYM-- 99
V+ +++TEN L E GYE++ VLQ + + +Q L+ L P T GD +
Sbjct: 55 VVALRSDKTENPLASE-EGYENISVLQQLSPI---YMQQLRELREKIRPSNTDEGDAISA 110
Query: 100 ------LIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNI 153
LI + + K ++ + L+++A + + ++ +++ G ++
Sbjct: 111 LVVAIQLIVDHCKKLKYRRRIILVSNARGSIDAEGLSEIIKKIKGENIELIVLGPDFDDL 170
Query: 154 VVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGD 213
E N++LL ++ + + + PV +RG
Sbjct: 171 --DYGFKEEEKDETKATNEDLLKQLAEGCDGVFGTMAQAIEELEIPRVKLTKPVHSYRGL 228
Query: 214 LELSE------KMKIKVWVYKKTGEEKFPTLKKY---SDKAPSTDKFAT-------HE-- 255
L L + M I V Y +T +++ PT Y SD AP + + HE
Sbjct: 229 LTLGDPEKYDTAMTIDVERYPRTMQQRPPTASSYVVRSDLAPGESQAQSSVTMAEGHEGG 288
Query: 256 ---------VKVDYEYKSVEDPS-----KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFK 301
VK + Y VEDP + + E KGY YG VPIS +E F+
Sbjct: 289 MPDQSDLAAVKQNISY-YVEDPDAPGGKRDIDREDTAKGYPYGSTAVPISESERNVTDFE 347
Query: 302 PEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCV 361
S+ ++GF A + R+ M ++ I + N +A++A+S+ A+ E+ A+ R V
Sbjct: 348 SFASLDIIGFVPADKLDRYMEMSKASIIIPQKANEKASMALSSFIHALYELETYAVARFV 407
Query: 362 WRQGQQSVVVGVLTPNVSEKINIPDSFYFNV-LPFAEDVREFQFPSFSKF-PVSWQ---- 415
++ ++ +++ +L P +IN +V LPFAED+R ++FP + VS +
Sbjct: 408 PKENKEPLIL-LLAP----EINPEYECLIDVELPFAEDMRGYRFPPLDRIVTVSGKEIHT 462
Query: 416 ----PNEQQQEAADNLVKMLDLAPSGKGEILQP------ELTPNPALERFYHHLELKSEH 465
P+E ++ + + +DL+ + + E P E +P L R + ++ H
Sbjct: 463 HKNLPSEDLMKSMSDYIDSMDLSTAAQDEDGDPTEFAAIEEAYSPVLHRVQQAIRWRAVH 522
Query: 466 QDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENP---KLKKSTRRFLREKP 522
PP L + +P LL +++ ++DA +K P K +K TR F EKP
Sbjct: 523 PTEEIPPPPGILTRYMKPQEHLLKQAKPSLDAIIAAGDVKRVPPQQKGRKRTREF--EKP 580
Query: 523 SGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTP---IQDFEAMMSRRDCPDWVDKA 579
++ + + ++ +K L+P I +F+ ++ + + +
Sbjct: 581 -----------------LSGLNIEELLGREKRVKLSPENAIPEFKQALNTTESVEDIKNI 623
Query: 580 IEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNF 639
+ M I + +S Y +AVE + ++ + +EP FND + + +K+ F
Sbjct: 624 TKQMSTIIQDYIRHSMGDSGYGRAVEAIRVMKVELMELEEPGLFNDFMRDL----KKKIF 679
Query: 640 S--------TFFDFLMSKKLSLISKSEAVDSDITDDEAGSFI 673
+ + + K LI K S++T++EA F+
Sbjct: 680 TGELGGDRKEMWYRIRVNKFGLIDKRATDLSNVTEEEARKFL 721
>gi|340520410|gb|EGR50646.1| hypothetical protein TRIREDRAFT_58213 [Trichoderma reesei QM6a]
Length = 731
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 170/732 (23%), Positives = 306/732 (41%), Gaps = 124/732 (16%)
Query: 5 REALLLLLDVSPSMHSV-----LPDVEKLCSRLIQK-KLIYGKNHE---VGVILFGTEET 55
+EA + ++D+ SM +V D++ S + K + N + VGV+ F T+ET
Sbjct: 4 KEATVFIIDLGASMAAVNGGREESDLDWSMSYVWDKISNVVASNRKTLCVGVVGFRTDET 63
Query: 56 ENELTKEVGGYEHVKVLQDIKVVDGHLVQSL--KHLPQGTCAGDYM--------LIKKYG 105
+ L+++ GYE++ +LQ + + +++L K P T GD + +I KY
Sbjct: 64 NHTLSED--GYENISILQPLGPMSMSSLKALQPKVKPSRTVEGDAISAIVIAVDMIDKYT 121
Query: 106 ETYKGKKHL-CLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPH 164
+ K K+ + C D PD G KE+ ++ +Q E
Sbjct: 122 KKNKWKRQISCEGVD----FDAPDYGFKEEDKPSVKKQ------------------NEET 159
Query: 165 MRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEK----- 219
++ +++ + F+ V++ L R + + P + G L L +
Sbjct: 160 LKKLVDGCGDDSRFAS-------MVEAIDDLNEPR-AKSVKPYKTYEGLLTLGDPKNAPA 211
Query: 220 -MKIKVWVYKKTGEEKFPTLKKY-----------SDKAPSTDKFATHEVKVDYEYKSVED 267
++I+V Y KT + P +D+ D V+ YK V D
Sbjct: 212 VVEIRVERYFKTHLARPPAASTVVVKEEQAGPSQADEDEQMDGAELTAVRQARTYK-VND 270
Query: 268 PS-----KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYY 322
P + V E KGY YG V IS ++ K EKS K++GF
Sbjct: 271 PDAPGGKRDVEFESLAKGYEYGRTAVHISESDQNVTKLATEKSFKIIGFVQKEKYEMLLN 330
Query: 323 MKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKI 382
+ + + +A + ++ +A S+L A+ E++ A+ R V + + ++V +L P +
Sbjct: 331 LGETCVTVASKYDEKSELAFSSLVWALSELDAYAVARLVTKDQKDPMLV-LLMPYME--- 386
Query: 383 NIPD--SFYFNVLPFAEDVREFQFPSFSK-FPVSWQ--------PNEQQQEAADNLVKML 431
PD Y LPFAED+R +QFP + VS Q P+++ +A + V +
Sbjct: 387 --PDYVCLYDVPLPFAEDIRTYQFPPLDRVVTVSGQTLTNHRLLPSDELNQAMSDYVDAM 444
Query: 432 DLAPSGKGEILQP-------ELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPD 484
D++ G E QP EL NPA+ R H ++ ++ H + P + L + P
Sbjct: 445 DISSYGIDEDGQPAEYATIDELY-NPAIHRIGHAIKQRAIHPEKPVPEIPPVLLRFAAPP 503
Query: 485 PTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNSME 544
L+ Q IDA +K+ P K R+ KP ++ ++
Sbjct: 504 TELVETVQPHIDALIHAADVKKVPPKAKGKRQRETVKP-----------------ISGLD 546
Query: 545 SKPVVTVDKIGDLTP---IQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYP 601
++ ++ G ++P I DF+ ++ + + + A + M + L+ +S Y
Sbjct: 547 VDALLGEEQKGSISPENAIPDFKRALNSSEEVEQIADATKQMGAIVRSLITDSFGDSKYA 606
Query: 602 KAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFST----FFDFLMSKKLSLISKS 657
+A+E + A+R+ I +EP +ND + + K F+ + KL LI K
Sbjct: 607 QAMEGIGAMREELINLEEPGLYNDFVRDLKKSLLSGALGGDRRDFWFKMRWAKLGLIDKK 666
Query: 658 EAVDSDITDDEA 669
++ S +T +EA
Sbjct: 667 QSEVSSVTLEEA 678
>gi|258568132|ref|XP_002584810.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237906256|gb|EEP80657.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 713
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 104/419 (24%), Positives = 194/419 (46%), Gaps = 35/419 (8%)
Query: 272 VPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIA 331
VP + KGY YG V IS ++ K + +++ +GF D N R+ M +VN+ +
Sbjct: 302 VPRDDLAKGYEYGRTAVHISESDENITKLDTDAALEFIGFIDNENYKRYMSMSNVNVIVG 361
Query: 332 EPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFN 391
+ N +A++A+S++ A+ E+ AI R V ++G+ +VV +L P + +
Sbjct: 362 QKLNEKASLALSSIVHALFELECYAIARLVTKKGKPPLVV-LLAPLIELGF---ECLLEV 417
Query: 392 VLPFAEDVREFQFPSFSKF-PVSWQ--------PNEQQQEAADNLVKMLDLAPSGKGEIL 442
LPFAEDVR ++FP + VS + P+++ +A D VK +DL+ G L
Sbjct: 418 QLPFAEDVRSYRFPPLDRIVTVSGKVVKEHRNLPSDELLDAMDKYVKNMDLSELDNGNPL 477
Query: 443 QP---ELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFC 499
+ E + +P L R + ++ + PP+ L K++ L+ +SQS++
Sbjct: 478 ESMALEDSFSPLLHRIDQAIRWRAVRPTESLPPIPKILDKLSHFPERLIDKSQSSLKGLI 537
Query: 500 GQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTP 559
+K+ P K R++ D+P +N E KI P
Sbjct: 538 SVSAVKKVPPRVKG-----RKRNRDVDKP--------LSGLNVDELLRGEKRLKISPENP 584
Query: 560 IQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQE 619
I +F+ ++ + +++A++ M + + S +NY + +E + +R+ I +E
Sbjct: 585 IPEFKQTLANTEDVSAIEEAVKQMSVIMETQIRESVGDVNYDRTIEGIGTMREELIAYEE 644
Query: 620 PKQFNDVLEKVCKICRKRNFS----TFFDFLMSKKLSLISKSEAVD-SDITDDEAGSFI 673
P +ND + ++ + + + +L LI S A+D SD+T+D+A F+
Sbjct: 645 PGLYNDFIRRLKQKLLDDELGGDRREMWWLVRKNRLGLID-SHALDISDVTEDQAREFL 702
>gi|403337575|gb|EJY68009.1| Ku P80 DNA helicase, putative [Oxytricha trifallax]
Length = 854
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 118/433 (27%), Positives = 197/433 (45%), Gaps = 78/433 (18%)
Query: 211 RGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTD---KFATHEVKVDYEYKSVED 267
+G+L++S+ K+ V +Y +T EE P L K+S A S + FA + ++ +++D
Sbjct: 132 QGNLDISKNFKLNVLIYSRTREEFLPILMKHSLVAESKNIKVGFAKVQTQM-----AIDD 186
Query: 268 PSKV-VPPEQRIKGYRYGPQVV----PISSAEWEAVKFKP---EKSVKLLGFTDASNILR 319
K+ +P EQ IK + Y Q+V I + + +K + EK KLLGFTD + L
Sbjct: 187 LDKITIPSEQDIKAFNYEKQIVRRTLGIEYVDDKDIKLQSSYCEKQFKLLGFTDDQSSLS 246
Query: 320 HYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVS 379
+ + + N R A + L A+ E +++ I R + R+ +V + + N
Sbjct: 247 SFLSR---CLLRRSFNER---AFAVLVYAVIETHRILITRIIERKNYYLKLV-LYSHNQQ 299
Query: 380 EKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKG 439
E+ N + LP E+ R++QF S +P S +AA L+K LD K
Sbjct: 300 EEANT----VYGQLPTNEEKRDYQFLSL--YPAS----RNHMQAAMELIKALDFH---KK 346
Query: 440 EILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITE---PDPTLLAESQSAID 496
+LQ ++++ L D K I E D L +
Sbjct: 347 RLLQS---------------NRRAQNDSPEEQVLQDLNKAIAEYVNTDKELFTMPKRK-- 389
Query: 497 AFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGD 556
Q +K++ +TR+ +R G + + DG+V + IG+
Sbjct: 390 ----QAPLKKHSIRSTTTRKRIRNNGGGFEFKDNDGAVKE-----------------IGN 428
Query: 557 LTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCIL 616
+ PI+DF+ M++ R D V AI+ +K+ I L+ NS G Y KA+E L +LR+ CI
Sbjct: 429 VNPIEDFKKMVTDRKV-DRVGTAIDQIKDMITKLVNNSLNGDLYHKAIECLASLREACIT 487
Query: 617 EQEPKQFNDVLEK 629
E E ++FN +E+
Sbjct: 488 EDEAQEFNLFMEQ 500
>gi|157137679|ref|XP_001657128.1| ku P80 DNA helicase [Aedes aegypti]
gi|108880785|gb|EAT45010.1| AAEL003684-PA [Aedes aegypti]
Length = 675
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 149/623 (23%), Positives = 258/623 (41%), Gaps = 82/623 (13%)
Query: 1 MARTREALLLLLDVSPSM--------HSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGT 52
MAR +E +++LDV + + S+++Q+K+ EVG++L GT
Sbjct: 1 MARNKEGCMIILDVGKDTLVKSGKHDQTFFERAKNCVSKIVQRKIFSKPQDEVGLVLMGT 60
Query: 53 EETENELTKEVGGYEHVKVLQDIKVVDGHLVQSL-KHLPQGTCAGDY-------MLIKKY 104
+ T N+L E GGY H+ ++ + +++ L K + GD+ M K
Sbjct: 61 DGTNNQLNVEYGGYHHISEAFELNPSNWQMLRVLEKQVNASKVNGDWFDALVVAMNFLKV 120
Query: 105 GETYKGKKHLCLI-TDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEP 163
G K L +I AL + DV +Q+ ++ +++ + V+ S+
Sbjct: 121 GAQAKKFASLKIILVSALSVSSNLDV----EQMDSVVKKLTEMPCELN--VINDSVEHHA 174
Query: 164 HMRVIIENDNL----LNIFSKKS-------SAKTLFVDSTTSLRGARKTRDISPVTI--- 209
+ DNL L IFS+K + + + D GA D + + +
Sbjct: 175 DSDEQQDEDNLIFDALGIFSQKQQKTKEQRANEKMLSDIVFKSNGALCNIDSAELLLVHF 234
Query: 210 ---------FRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDY 260
+ L + +++I + + EEK S K ST AT ++K DY
Sbjct: 235 EKKATRAAPWNSVLSIGTQIQISISAFLLITEEKGLG----SFKTESTYPEATVQLKTDY 290
Query: 261 EYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKP-EKSVKLLGFTDASNILR 319
+K+ D S E I GY YG VVP S + +K E+ + LGFT A NIL
Sbjct: 291 -FKN--DQSFEPDYENVINGYMYGSTVVPYDSQ--IDIDYKSGEQRLSCLGFTVAGNILE 345
Query: 320 HYYM-KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNV 378
Y ++ +A + + ++AL +AM +++ V IV V+R+ + + VL P
Sbjct: 346 EYLCGTGTHVVVARKDCAASEAKLAALVKAMIDLDVVMIVTKVYRRDTRP-KINVLMPTF 404
Query: 379 SEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV-----KMLDL 433
++ F L F E+V +FP ++P + Q EA D L+
Sbjct: 405 KKRY---PCFIMLELCFQEEVALLKFPPL--LSNKYKPTDAQYEAVDKLIDSMDLMDALD 459
Query: 434 APSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQS 493
+G E T NP + Y + ++ H A P +D LK + + P + S+
Sbjct: 460 DDTGSREAFALHKTLNPIHQHMYRTVAHRALHPKAPIPAMDKELKNLVDVPPKVRERSKP 519
Query: 494 AIDAFCGQFVIKE---NPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNSMESKPVV- 549
+D F +KE N +LK R + N D + + N +++ +
Sbjct: 520 ILDEVKNLFPLKEIKVNARLKWLQR-------ANKITANLDATAAGTSQQNPTDAEEELD 572
Query: 550 ---TVDKIGDLTPIQDFEAMMSR 569
T+ ++G +TP +DF ++ R
Sbjct: 573 DQRTIVEVGTVTPAEDFALLLKR 595
>gi|242208290|ref|XP_002469996.1| predicted protein [Postia placenta Mad-698-R]
gi|220730896|gb|EED84746.1| predicted protein [Postia placenta Mad-698-R]
Length = 822
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 162/742 (21%), Positives = 286/742 (38%), Gaps = 146/742 (19%)
Query: 17 SMHSVLPDVEKLCSRLIQKKLIYG-KNHEVGVILFGTEETENELTKEVGGYEHVKVLQDI 75
++ V+ ++++ + + ++ G K + GVI FG+EET+N + ++ GGYE+V I
Sbjct: 37 ALQFVMLKIQEMAALTVATQIYNGRKTDQCGVITFGSEETDNIIHEKHGGYENVSEYIPI 96
Query: 76 KVVDGHLVQSLKHLPQGTCAGD-----YMLIKKYGETYKGKK----HLCLITDALCPLKD 126
+ + L L T GD + I+ + KK + L+TD P++
Sbjct: 97 GQPNAGTLAKLARLQPSTVIGDPIDALIVGIETQHQYLSSKKTWTRKMVLLTDGENPIEV 156
Query: 127 PDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKT 186
D +++T+ + G+ + + G+ +++ N+ + +K +
Sbjct: 157 EDWEATVHKMNTVQIHLTVVGVDFDDEYLPFLEEGKSNIKRA--NEEFYHTLAKSMAHGI 214
Query: 187 L----FVDSTTSLRGARKTRDISPVTIFR-GDLEL--SEKMKIKVWVYKKTGEEKFPTLK 239
+ F S ++T+ T+ R GD++ E M+I V K T + + K
Sbjct: 215 VGNCDFALQELSRPDIKQTKSALLGTVLRIGDVDARPEEAMEILVKTSKATAIARPKSWK 274
Query: 240 KYSDKA-------------PSTDKFATHEVKVDYE---------------YKSVEDPSKV 271
K++ + T+ +A ++ Y Y+ +E +K
Sbjct: 275 KFARRQKEESQEEANIPLDEETEVYAQLHMRTQYMIEKQPPEGEEDQPPVYEQLEGITK- 333
Query: 272 VPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIA 331
E+ ++G++YG P ++E + + + + GF N R + M +V A
Sbjct: 334 ---EELVRGFKYGSSYAPCPGGQFE--RLPTRRGIDICGFFLEKNFRREWEMSEVTYVWA 388
Query: 332 EPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYF- 390
+P VA+SA+ +AM E +AI R R G +GVL P + EK D F +
Sbjct: 389 DPAQPLQQVALSAVVQAMYEKGAMAIARWASRDGMDP-KMGVLRPTMFEKA---DCFMWV 444
Query: 391 --------NVLPFAEDVREFQFPSFSKF---------PVSWQPNEQQQEAADNLVKMLDL 433
+ +PFA+DVR F F S + P ++Q EA ++ V +DL
Sbjct: 445 QTVEVNALSKMPFADDVRNFSFASLETLINKKGEVVTDHPYLPTDEQMEAMEHFVDAMDL 504
Query: 434 APSGKGE-------ILQPELTPNPALERFYH---HLELKSEHQDAAPPPLDDSLKKITEP 483
+G+ + L+ NP + R H + ++ PP L K EP
Sbjct: 505 MDAGEKDEEGNREPWFDTRLSYNPVIHRTKQAQFHAAIVADLNTHPLPPAHSELTKYFEP 564
Query: 484 DPTLLAESQSAIDAFCGQFVIKENPK----------------------LKKSTRRFLREK 521
+L S+ AI+ F IKE PK L K RR L +
Sbjct: 565 PKRVLKRSRDAIEECKQVFKIKEVPKRVVQTRKDGHVRAGDEDEDMILLDKMPRRRLSKS 624
Query: 522 PSGSDEPNGDGSVSDAQAVNSMESKP---------------------------------- 547
S + S S +Q +S P
Sbjct: 625 ASQFVASQQEASTSRSQVPRRKKSNPNDSATESETEDEDEELLLDKKQLPTPVPDADEGS 684
Query: 548 --VVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVE 605
T +G +P++DF+ +SR D V KA+ED+ I ++ + ++
Sbjct: 685 DAAPTARIVGTESPLEDFKDNISRGDL---VTKAVEDLGAVIKEIVLRPFSARRTEEMLQ 741
Query: 606 LLVALRKGCILEQEPKQFNDVL 627
+ LRK C+ E E +N L
Sbjct: 742 CMQELRKVCLEEDEVDAWNAFL 763
>gi|121795547|sp|Q2MHH2.1|KU80_ASPOR RecName: Full=ATP-dependent DNA helicase II subunit 2; AltName:
Full=ATP-dependent DNA helicase II subunit Ku80
gi|85677428|dbj|BAE78503.1| Ku80 protein [Aspergillus oryzae]
Length = 725
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 164/738 (22%), Positives = 301/738 (40%), Gaps = 99/738 (13%)
Query: 5 REALLLLLDVSPSMHSV-----LPDVE----KLCSRLIQKKLIYGKNHEVGVILFGTEET 55
+EA + ++DV SM + D+E + R+ K +GVI T+ET
Sbjct: 4 KEATVYIVDVGRSMGECRNGRSVTDLEWAMQYVWDRITGTVATGRKTAMMGVIGLRTDET 63
Query: 56 ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL-----PQGTCAGDYM--------LIK 102
NEL +V + H+ VL ++K L+ ++ L P T GD + +I
Sbjct: 64 SNELEDDVH-FSHIAVLSNLK---QFLMPDIRKLEDELKPSKTDKGDAISAIILAIQMII 119
Query: 103 KYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVV-RASLSG 161
+ + K ++ + L+T+ + D D+G +V ++V G+ +
Sbjct: 120 THCKKLKYRRKIVLVTNGQGRMSDEDLGEIVKKVKEDNIELVVMGIDFDDPEYGYKEEDK 179
Query: 162 EPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSE--- 218
+PH EN+ LL + + + + + + V F+G L+L
Sbjct: 180 DPHK---AENETLLRTLVEDCDGVYGTFEQAVAELDIPRVKSVRSVASFKGYLQLGNPEE 236
Query: 219 ---KMKIKVWVYKKTGEEKFPTLKKY---------------------SDKAPSTDKFATH 254
++I V Y +T K PT + + K +
Sbjct: 237 YDSALRIPVERYYRTYPAKPPTASSFVLRSEPEAGQEEAESSEAAAATQKGSQSGDAGLT 296
Query: 255 EVKVDYEYKSVEDPS----KV-VPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLL 309
V+ Y+ VED S K+ + ++ KGY YG V IS + ++L+
Sbjct: 297 TVRTMRTYQ-VEDKSAPGGKIDIERDELAKGYEYGRTAVHISETDENITILDTFAGLELM 355
Query: 310 GFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSV 369
GF R+ +M + N+ IA+ N +A +A+S+ A+ E+ A+ R V ++ + V
Sbjct: 356 GFIQTDQYQRYMHMSNTNIIIAQRANDKAALALSSFIHALFELECYAVARLVVKENKPPV 415
Query: 370 VVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK-FPVSWQ--------PNEQQ 420
+V +L P++ + + LPFAEDVR ++FP K VS + P++
Sbjct: 416 IV-LLAPSIEPEY---ECLLEVQLPFAEDVRTYRFPPLDKVITVSGKVVTQHRNLPSDDL 471
Query: 421 QEAADNLVKMLDLAPSGKG----EILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDS 476
+ V ++L + + E + + +P L R + ++ H D PP +
Sbjct: 472 LDVMGKYVNSMELVDADEDGDPVETFPIDDSYSPVLHRIDAAIRARAIHPDQPIPPPSER 531
Query: 477 LKKITEPDPTLLAESQSAIDAFCGQFVIKE-NPKLKKSTRRFLREKPSGSDEPNGDGSVS 535
L K + P L+ +SQ ++ +K+ PK K R EKP S
Sbjct: 532 LTKFSHPREDLIEKSQKHLEKLIEIADVKKVPPKAKGRKRTRETEKPL---------SGL 582
Query: 536 DAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSN 595
D A+ E + KI I +F+ +++ + + + A + M + +++S
Sbjct: 583 DVDALLHHEKRV-----KISPNNAIPEFKQTLAQAENIEAIKDATKQMMVIVEDQIKHSL 637
Query: 596 EGINYPKAVELLVALRKGCILEQEPKQFNDVL----EKVCKICRKRNFSTFFDFLMSKKL 651
NY + +E L +R + +EP +ND L +K+ + + + + KL
Sbjct: 638 GNANYDRVIEALGTMRDELVSYEEPASYNDFLGQLKDKLLQEKLGGDRQELWWLVRRNKL 697
Query: 652 SLISKSEAVDSDITDDEA 669
L+++ E+ S +TD EA
Sbjct: 698 GLVTQRESDQSRVTDTEA 715
>gi|346971582|gb|EGY15034.1| Ku80 [Verticillium dahliae VdLs.17]
Length = 726
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 163/699 (23%), Positives = 292/699 (41%), Gaps = 90/699 (12%)
Query: 41 KNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDY 98
K VGV+ T+ET + L E GYE++ +LQ+I + + ++ L+ + P T GD
Sbjct: 49 KTWTVGVVGLKTDETRHLLQDE-EGYENISILQEIGPMSMNSLKELQDVIVPSETHTGDA 107
Query: 99 M--------LIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRM 150
+ +++KY + K + + LITD P+ D ED I + +
Sbjct: 108 VSAIVIAVDMMEKYTKALKYARKIYLITDGTGPIDGDDF---EDITKKINHDGIEL-IEE 163
Query: 151 KNIVVRASLSGEPHMR-------VIIENDNLL-NIFSKKSSAKTLFVDSTTSLRGARKTR 202
++AS PH + EN+ LL ++ SK A+ + + +
Sbjct: 164 DKPSLKAS-QPRPHSDESGTNSFLKKENERLLKDLVSKCKDAQLATIAEAIDELDTPRLK 222
Query: 203 DISPVTIFRGDLELSE--------KMKIKVWVYKKTGEEKFP---TLKKYSDKAPST--- 248
+ P + G L L + M I V Y KT + P T+ ++ PS
Sbjct: 223 PVRPYKSYDGPLTLGDVKDPKHPSPMVINVERYFKTKLTRPPPASTVVLRTEPGPSQAAE 282
Query: 249 --------DKFATHEVKVDYEYKSVEDPS-----KVVPPEQRIKGYRYGPQVVPISSAEW 295
++ YK V DP + V + KGY YG V IS +EW
Sbjct: 283 GEGMEGVESSLNFGAIRQARSYK-VNDPDAPGGKRDVEFDSLAKGYEYGRTAVHISESEW 341
Query: 296 EAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKV 355
K + K+ +++GF A M + + ++ + ++ +A+S+L A+ E++
Sbjct: 342 NMTKIETTKAFEIVGFIPADKFEPFLSMGESCITVSRKHDDKSQLALSSLIHALYELSSY 401
Query: 356 AIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK-FPVSW 414
A+ R V + G++ ++ +L P + + + Y LPFAEDVR +QFP + VS
Sbjct: 402 AVARIVLKDGKEPQLI-LLAPGIEPDL---ECLYDVPLPFAEDVRSYQFPPLDRVVTVSG 457
Query: 415 Q--------PNEQQQEAADNLVKMLDLAPSGKGEI-LQP-ELTP-----NPALERFYHHL 459
Q P+++ +A + V +DL K E +P E P NPA+ R +
Sbjct: 458 QTLTKHRLIPDDELNDAMSDFVDAMDLDTFVKDEDGGEPTEYAPIDESYNPAIHRINQVV 517
Query: 460 ELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLR 519
++ P+ L + EP LL ++++ + A +K+ P K+ R
Sbjct: 518 RDRAIKPTGDIEPIPRVLLRYAEPPEDLLTKAKADMKALIKAAEVKKVPPKAKNKRNRDA 577
Query: 520 EKP-SGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDK 578
KP SG D GS+ + S ++ + +F+ ++ +++
Sbjct: 578 AKPLSGLDIDALLGSLPKRARLVSRDNA-------------VPEFKQALTSATDVAAIEE 624
Query: 579 AIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRN 638
A M I GL+ +S Y +A+E L +R I +EP +ND ++
Sbjct: 625 AASQMGEVIRGLVTDSFGDAEYNRAIEALGVMRTELINMEEPAMYNDFVKDFKTRLLAGE 684
Query: 639 FST----FFDFLMSKKLSLISKSEAVDSDITDDEAGSFI 673
F + + + +L LI +++ S++T ++A F+
Sbjct: 685 FGGDRREMWWRVRTGRLGLIDSAQSEVSEVTSEQAAEFL 723
>gi|328776977|ref|XP_625128.3| PREDICTED: x-ray repair cross-complementing protein 5-like [Apis
mellifera]
Length = 712
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 151/622 (24%), Positives = 273/622 (43%), Gaps = 99/622 (15%)
Query: 4 TREALLLLLDV---SPSMH---SVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETEN 57
+ E+L+LLL++ +P++ S+ + + R I+K + E+ ++L G+ T+N
Sbjct: 3 SAESLVLLLNIGVTNPNIENNSSLFEKAKYIAQRKIEKMIFLKPKDEIAIMLMGSSITKN 62
Query: 58 ELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDYMLIKKYGETYKGKKHLCLI 117
L + +++ D +V + V+ +L K K+
Sbjct: 63 NLNSK-----YIEEFTDFQVPNWDFVRKCMNL-------------------KSTKYCYNW 98
Query: 118 TDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLN- 176
+AL + K++ + R+++ M + ++ + ++I + +NLL+
Sbjct: 99 VEALYAAVE---FIKQNVIDNSIRKIIL----MSDFNEETNIISKFEAKLIAKAENLLHD 151
Query: 177 --IFSKKSSAKTL-------------FVDSTTSLRGARKTRDISPVTIFRGDLELSEKMK 221
+ S SS K L F D+ + L+ +T + P+ + DL+L +K K
Sbjct: 152 KPLTSLNSSKKLLKDVHDQINGQHIIFDDAISCLKFYEQTS-VKPLPSYY-DLQLFDK-K 208
Query: 222 IKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGY 281
I V Y K EKFPT KK A K + K++Y ++ ++ IKGY
Sbjct: 209 IPVVSYVKIDIEKFPTWKK----AKGNQKLQS---KIEY----LDGQRNSYAKDEIIKGY 257
Query: 282 RYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNI-LRHYYMKDVNLFIAEPGNSRAT 339
+YG +P+ + + +K E KS K+ GFTD +NI L H+Y ++ + S T
Sbjct: 258 KYGGTFIPVEKELEDKLSYKSEMKSYKIYGFTDKNNIDLEHFYKSATHVILPSSEESNVT 317
Query: 340 VAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNV---LPFA 396
+L +AM E N VAIVR V+R +V + I+IP+ + V L FA
Sbjct: 318 KPFYSLVQAMHETNSVAIVRKVFRNNSTPRMVALFPC-----IDIPNEPWCLVEIELAFA 372
Query: 397 EDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKML---DLAPSGK---GEILQPELTPNP 450
ED R + S + Q + +Q +A DNL+ L D+ S + + P PNP
Sbjct: 373 EDQRLME--SRPMKSIIKQLSNEQNKAVDNLINSLMLNDIQDSCEIDGNQYFLPGCVPNP 430
Query: 451 ALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKL 510
A++ +H L ++ + D P +++ LKKI E P + S+S + F + EN L
Sbjct: 431 AIQHRWHILSYRAINPDKPLPAMENYLKKILEA-PLIKERSKSHVQNIAQLFRL-ENIDL 488
Query: 511 KKSTRRFLRE---KPSGSDEPNGDGSVSDAQAV--NSMESKPVVTVDK----IGDLTPIQ 561
K + + E + SD + D + NS + ++++D + +L P
Sbjct: 489 KAKEKNDINEDNMQIDNSDSTKDCNKIEDKTDIENNSYKEDSILSLDTSDVDLDELAPAG 548
Query: 562 DF---EAMMSRRDCPDWVDKAI 580
++ ++R C W+++
Sbjct: 549 SANPPQSQSTKRRCLAWINRCF 570
>gi|400597468|gb|EJP65201.1| Ku family DNA helicase, putative [Beauveria bassiana ARSEF 2860]
Length = 716
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 175/741 (23%), Positives = 301/741 (40%), Gaps = 105/741 (14%)
Query: 5 REALLLLLDVSPSM---HSVLPDVEKLCS-RLIQKKL--IYGKNHE---VGVILFGTEET 55
+EA + +LD+ SM HS + + S R + K+ I N + +G + T+ T
Sbjct: 4 KEATVFILDLGASMGKSHSGRSESDLDWSMRYVWDKITDIVSANRKTLCIGAVGLRTDGT 63
Query: 56 ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL-----PQGTCAGDYM--------LIK 102
N+L E GY+++ VLQ++ + + SLK L P T GD + +I
Sbjct: 64 MNKLMDE-DGYDNISVLQELGPM---TMTSLKTLQTSIKPSKTFDGDAISAIVVAVDMID 119
Query: 103 KYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGE 162
+ + K + + +ITDA + D+G +++ + G+ + E
Sbjct: 120 TFTKKLKWNRKIVMITDAQSGIDPDDIGDIAHKINDSNIHLTVLGVDFDD--PEYGYKEE 177
Query: 163 PHMRVIIENDNLLNIFSKKSSAKTL--FVDSTTSLRGARKTRDISPVTIFRGDLELSE-- 218
EN+ L + + + V++ + R + + P + G L L +
Sbjct: 178 NKSPAKAENEKTLKALTDQCTDSVFASIVEAIDEIDTPR-VKQVKPYKSYDGTLVLGDPD 236
Query: 219 ----KMKIKVWVYKKTGEEKFPT-----LKKYSDKAPSTDKFATHEVKVDYEYKSVEDPS 269
M I V Y KT + T LK S ST + D E+ +V+
Sbjct: 237 KFPFAMSINVERYFKTHLARQMTASTVVLKSESGGTQSTQTLEEEPIN-DVEFSAVKQAR 295
Query: 270 --KVVPP-----------EQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASN 316
KV P E KG+ YG V IS +E K + KS ++GF
Sbjct: 296 TYKVNAPDAPGGKKDVEFESLAKGFEYGRTAVHISESEHNITKLETIKSFSIVGFIPWEK 355
Query: 317 ILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTP 376
M +V + A+ + ++ +A+S+L + E+ AI R V + G+ +V +L P
Sbjct: 356 YEPFLSMGEVCVTHAKKFDEKSELAMSSLVWGLNELESYAIARLVTKDGKDPTLV-LLAP 414
Query: 377 NVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK-FPVSWQ--------PNEQQQEAADNL 427
+ ++ + Y LPFAED+R ++FP K V+ Q P E+ EA
Sbjct: 415 GLEPEL---ECLYDVPLPFAEDIRAYKFPPLDKVVTVTGQTLTTHRLLPTEELTEAMGEY 471
Query: 428 VKMLDLAPSGKGEILQP-ELTP-----NPALERFYHHLELKSEHQDAAPPPLDD---SLK 478
V +DL G E +P E P NP + R + ++ ++ H D P+DD L
Sbjct: 472 VDAMDLDSYGMDENGEPAEFAPFDETYNPVIHRINNVVKQRAVHPDQ---PIDDIPSILL 528
Query: 479 KITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQ 538
+ P L+ Q I+ + +K+ P K R KP
Sbjct: 529 RYANPPQDLIDRVQDRIEDLIKEADVKKVPPKAKGRRNKEAVKP---------------- 572
Query: 539 AVNSMESKPVVTVDKIGDLTP---IQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSN 595
++ ++ ++ D G +TP + DF+ M+ + + A + M I L+ +S
Sbjct: 573 -LSGLDVDALLGEDSKGQITPENAVPDFKRAMATSEEISDIQSAAKQMGGIIESLVTDSF 631
Query: 596 EGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFST----FFDFLMSKKL 651
Y +AVE + +R+ I +EP+ +N + ++ K F+ L +L
Sbjct: 632 GDSKYARAVECIGVMREELINMEEPEMYNSFVRELKKSLLSGTLGGDRRDFWFKLRWSRL 691
Query: 652 SLISKSEAVDSDITDDEAGSF 672
LI +S+ S +T +EA F
Sbjct: 692 GLIEQSQLDTSKVTAEEADEF 712
>gi|240280661|gb|EER44165.1| Ku80 [Ajellomyces capsulatus H143]
Length = 723
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 169/750 (22%), Positives = 325/750 (43%), Gaps = 118/750 (15%)
Query: 5 REALLLLLDVSPSMHSV-----LPDVEKLCSRLIQKKLIYG-----KNHEVGVILFGTEE 54
+EA + ++DV SM + D++ R I K+ K +GVI T++
Sbjct: 4 KEATVYIVDVGKSMGECHNGRSISDLD-WAMRYIWDKITTTVATGRKTVTLGVIGLKTDD 62
Query: 55 TENELTK--EVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDYM--------LIK 102
+ N L + E Y ++ V Q+I + ++ L+ L P T GD + +I
Sbjct: 63 SNNPLWEKDEEESYANISVFQNISQILMPQIRELRELIKPSHTLEGDAISSLILAIDMIV 122
Query: 103 KYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQ---MVAFGLRMKNIVVRASL 159
+Y + K K+ + LITD + D+ + VS I + +V G+ +
Sbjct: 123 RYCKKLKYKRKIVLITDGTGAM---DIDGIDGIVSKINEENIELVILGVDFDD--PEYGF 177
Query: 160 SGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLEL--- 216
E + +N++ L + ++ S +T+ + + F+GDL L
Sbjct: 178 KEEDKEPLKAKNESHLKQLVEDCEGMFGTLEHAISEMEIPRTKVVRSMPTFKGDLRLGDP 237
Query: 217 ---SEKMKIKVWVYKKT-------------------GEEKFPTLKKYSDKAPSTDKFA-- 252
S + I+V Y +T G+E + + K PS ++ A
Sbjct: 238 DQYSSALTIQVERYYRTYAARPPVASSFVSSSALSEGQETAQSSATIATKEPSQERGAGA 297
Query: 253 ----------THEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKP 302
T++V + K + V ++ KGY YG V IS ++ K +
Sbjct: 298 ASLTAVRNARTYQV----DDKGAAGGKRDVARDELAKGYEYGRTAVHISESDENITKLET 353
Query: 303 EKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVW 362
E +++ +GF + N R+ M N+ IA+ N++A +A+S++ A+ E+ A+ R V
Sbjct: 354 EAALEFIGFIPSDNYDRYMNMSTSNIIIAQKTNNKAILALSSIIHALFELECYAVARLVP 413
Query: 363 RQGQQSVVVGVLTPNVSEKINIPD--SFYFNVLPFAEDVREFQFPSFSK-FPVSWQP-NE 418
+ G+ +VV +L P++ PD LPFAED+R ++FP K VS + E
Sbjct: 414 KAGKSPLVV-LLAPSIE-----PDYECLLEVQLPFAEDMRSYRFPPLDKVVTVSGKTVTE 467
Query: 419 QQQEAADNLV-KMLDLAPSGK-------GEILQP---ELTPNPALERFYHHLELKSEHQD 467
+ +D+L+ +M + S + GE ++ E + +P L R H + ++ H
Sbjct: 468 HRNLPSDSLLSRMAEYVDSLEHTEKDEDGETIESMSIENSFSPLLHRIDHAIRWRAVHPS 527
Query: 468 AAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDE 527
PP+ + L+K++ L A+S++ + +K+ P K R++ D+
Sbjct: 528 EPFPPVPEILQKLSRQPEDLQAQSENTLANLIATSDVKKVPPKAKG-----RKRDREIDK 582
Query: 528 PNGDGSVSDAQAVNSMESKPVVTVDKIGDLTP---IQDF-EAMMSRRDCPDWVDKAIEDM 583
P ++ + + ++ +K ++P I +F ++++S +D D V A++ M
Sbjct: 583 P-----------LSGLNVEELLQTEKRVKISPDNAIPEFKQSLVSSQDL-DAVKDAVKQM 630
Query: 584 KNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFS--- 640
+ I + +S NY +AVE L +++ + +EP +ND + + +
Sbjct: 631 SSIIESQIRHSLGDANYDRAVEGLGTMKEELVAFEEPTLYNDFIRNLKTKLLGNDLGGDR 690
Query: 641 -TFFDFLMSKKLSLISKSEAVDSDITDDEA 669
+ ++ +L L+ K + SD+T++EA
Sbjct: 691 REMWWYIRKNRLGLVDKRLSELSDVTEEEA 720
>gi|401709869|dbj|BAM36546.1| ku80 protein [Aspergillus aculeatus]
Length = 726
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 155/709 (21%), Positives = 300/709 (42%), Gaps = 107/709 (15%)
Query: 41 KNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSL--KHLPQGTCAGDY 98
K +GVI T++T N+L + + ++ V IK ++ L K +P T GD
Sbjct: 49 KTAGIGVIGLRTDDTSNDLEDD-ADFANISVFSGIKQFLMPDIRELSEKIVPSKTNKGDA 107
Query: 99 M--------LIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRM 150
+ +I + + K K+ + L+TD P+ D +S I +++ + +
Sbjct: 108 ISAIVLAIQMIIIHCKKLKYKRRIVLVTDGKGPMN-------TDSLSEITKKIKEDNIEL 160
Query: 151 KNIVVRASLSGEPHMRVI--------IENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTR 202
++ +P V EN+ +L ++ ++ + + +
Sbjct: 161 ---IILGPDFDDPDYGVKEEDKDPQKAENEAILRSLAEDCDGAYGTLEQAVAELQIPRVK 217
Query: 203 DISPVTIFRGDLELSE------KMKIKVWVYKKTGEEKFPTLKKY---SDKAPS------ 247
+ F+G L+L ++I V Y +T K P+ ++ SD A S
Sbjct: 218 SVRVTATFKGFLQLGNPEEYDTALRIPVERYFRTHAAKPPSASQFVLRSDLAASQEQPES 277
Query: 248 -------------TDKFATHEVKVDYEYKSVEDPSKVVPPEQR-------IKGYRYGPQV 287
TD + V+ ++ + P + P +R KGY YG
Sbjct: 278 SATAAAAAQESQPTDGNSLTNVR---NLRAYQVPDEEAPGGKRDVELGDLAKGYEYGRTA 334
Query: 288 VPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALAR 347
V IS + + +++LLGF + R+ ++ N+ IA+ N +A +A+S+
Sbjct: 335 VHISETDLNITTLETFAALELLGFIQSDRYDRYMHLSTTNIIIAQRANDKAALALSSFIH 394
Query: 348 AMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD--SFYFNVLPFAEDVREFQFP 405
A+ E+ A+ R V ++ + +VV +L P++ PD LPFAEDVR ++FP
Sbjct: 395 ALFELECYAVARLVVKENKPPLVV-LLAPSIE-----PDYECLLEAQLPFAEDVRTYRFP 448
Query: 406 SFSK-FPVSWQ--------PNEQQQEAADNLVKMLDLAPSGKG----EILQPELTPNPAL 452
K VS + PNE +A + V ++L + + + L E + +P L
Sbjct: 449 PLDKVLTVSGKVVTQHRNLPNEDLMDAMEKYVLGMELNDTDENGDPVDTLPIEDSFSPVL 508
Query: 453 ERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKE-NPKLK 511
R + ++ H + PP ++L K + P L+ +SQ ++ +K+ PK K
Sbjct: 509 HRTDAAIRFRAIHPNKPIPPPSETLTKFSNPPQDLVEKSQPQLEKLIAVAGVKKVPPKAK 568
Query: 512 KSTRRFLREKPSGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRD 571
R EKP S D A+ E + KI I +F+ +++ +
Sbjct: 569 GRKRTRETEKPL---------SGLDVDALLHQEKRA-----KISPNNAIPEFKQTVAQAE 614
Query: 572 CPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVC 631
+ + +A++ M + + +S NY + E + +R+ + +EP +ND L ++
Sbjct: 615 NIETIKEAVKQMSAILEDQIRHSLGDANYDRVTEGMGTMREELLAYEEPALYNDFLRQLK 674
Query: 632 -KICRKR---NFSTFFDFLMSKKLSLISKSEAVDSDITDDEAGSFIVKS 676
K+ ++R + + + +L LI ++++ S++T++EA +F+ S
Sbjct: 675 EKVLQERLGGDRRELWWLIRRSRLGLIDRAQSDQSEVTEEEAKAFMSAS 723
>gi|67536764|ref|XP_662156.1| hypothetical protein AN4552.2 [Aspergillus nidulans FGSC A4]
gi|74595831|sp|Q5B4H8.1|KU80_EMENI RecName: Full=ATP-dependent DNA helicase II subunit 2; AltName:
Full=ATP-dependent DNA helicase II subunit Ku80
gi|40741705|gb|EAA60895.1| hypothetical protein AN4552.2 [Aspergillus nidulans FGSC A4]
gi|259482618|tpe|CBF77271.1| TPA: ATP-dependent DNA helicase II subunit 2 (EC
3.6.1.-)(ATP-dependent DNA helicase II subunit Ku80)
[Source:UniProtKB/Swiss-Prot;Acc:Q5B4H8] [Aspergillus
nidulans FGSC A4]
Length = 725
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 167/757 (22%), Positives = 314/757 (41%), Gaps = 125/757 (16%)
Query: 5 REALLLLLDVSPSMHSV-----LPDVE---KLCSRLIQKKLIYG-KNHEVGVILFGTEET 55
+EA + ++DV SM L D+E K I + G K +GVI T+ T
Sbjct: 4 KEATVYIVDVGKSMGERRNGRDLTDLEWAMKYVWDCITNTVATGRKTAMLGVIGLKTDGT 63
Query: 56 ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL-----PQGTCAGDYM--------LIK 102
+NEL E + H+ VL +IK L+ ++ L P GD + +I
Sbjct: 64 DNELGDE-SHFSHISVLSEIK---QFLMSDIRELGERIKPSSVDKGDAISALILAIQMII 119
Query: 103 KYGETYKGKKHLCLITDALCPLKDPDVG-----TKEDQVSTIARQMVA----------FG 147
+ + K K+ + LIT+ L + ++ KED + I + +G
Sbjct: 120 THCKKLKWKRKIVLITNGLGRMNSENLDDIVSKVKEDNIELIILDLTGRRGPDFDDAEYG 179
Query: 148 LRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPV 207
++ ++ +PH N+ LL +++ ++ + + + PV
Sbjct: 180 IKEED--------KDPHK---ASNETLLRTITERCDGVFGTLEQAVEETEIPRVKPVRPV 228
Query: 208 TIFRGDLELSE------KMKIKVWVYKKTGEEKFPTLKKY---SDKAPSTD----KFATH 254
F+G L+L ++I V Y +T K PT ++ SD A + A
Sbjct: 229 ASFKGFLQLGNPEEYDTAVRIPVERYPRTMVAKPPTASQFVLRSDLAAGQEGPVSSTAVP 288
Query: 255 EVKVD-------------YEYKSVEDPSKVVPPEQR--IKGYRYGPQVVPISSAEWEAVK 299
E + + Y+ P + E+ KGY YG V IS + +
Sbjct: 289 ETQPEDGSNLTNVRNLRTYQVSDESAPGGKIDVERDDLAKGYEYGRTAVHISETDENITR 348
Query: 300 FKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVR 359
+ +++L+GF + R+ ++ + ++ IA N +A++A+S+ A+ E+ A+ R
Sbjct: 349 LETTAAMELVGFIQSERYDRYMHLSNTHIIIANRANDKASLALSSFIHALFELESYAVAR 408
Query: 360 CVWRQGQQSVVVGVLTPNVSEKINIPD--SFYFNVLPFAEDVREFQFPSFSK-FPVSWQ- 415
V ++ + +V +L P++ PD LPFAEDVR ++FP VS +
Sbjct: 409 LVTKENKPPTLV-LLAPSIE-----PDYECLLEVQLPFAEDVRTYRFPPLDHVVTVSGKV 462
Query: 416 -------PNEQQQEAADNLVKMLDLAPSGK-GEILQPELTP-------NPALERFYHHLE 460
PN+ +A D V ++L + + G+++ TP +P L R +
Sbjct: 463 VTQHRNLPNDDLLDAMDKYVDSMELKGTDEDGDLVN---TPFPIDDSFSPVLHRVNAAIR 519
Query: 461 LKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLRE 520
++ H + PP L + ++P LL ++ + +K+ P K +R
Sbjct: 520 SRAIHPNDPIPPPARILTQFSQPPEHLLKNAERHLKRLIEVADVKKVPPKAKGRKR---- 575
Query: 521 KPSGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAI 580
+ EP S D ++ E + +I I +F+ +++ + + + A+
Sbjct: 576 ----AREPEKPLSGLDVDSLLHQEKRV-----RISPNNAIPEFKQTLAQAENIETMKDAV 626
Query: 581 EDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFS 640
+ M++ + + +S NY + E L +R+ I +EP +ND++ K+ + K
Sbjct: 627 KQMRSILEDQIRHSLGDANYDRVTEGLGVVREELIAYEEPGLYNDLIRKLKEALLKEKLG 686
Query: 641 ----TFFDFLMSKKLSLISKSEAVDSDITDDEAGSFI 673
+ L KL LI + E+ S++T++EA F+
Sbjct: 687 GDQRELWWLLKRSKLGLIEQRESELSEVTEEEAKKFM 723
>gi|452846847|gb|EME48779.1| hypothetical protein DOTSEDRAFT_67726 [Dothistroma septosporum
NZE10]
Length = 728
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 150/692 (21%), Positives = 290/692 (41%), Gaps = 77/692 (11%)
Query: 41 KNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKH--LPQGTCAGDY 98
K GV+ T++T+N + E Y++VKVLQ + + V+ L+ + T AGD
Sbjct: 49 KTAMAGVVGLRTDDTDNPMDVE-ESYQNVKVLQGLSQILMPDVRRLRKELVVSQTDAGDA 107
Query: 99 M--------LIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRM 150
+ +I + + K ++ + L+TDA P+ D+ + ++ +V G+
Sbjct: 108 ISSLVVAIHMIVETCKKLKYERTIVLVTDARAPMDTDDLLQIKRKILEDGIDLVILGVDF 167
Query: 151 KNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIF 210
+ E ++ +N+ + K + + + +T+ PV +
Sbjct: 168 DD--TEYGFKEECKDQIKADNEEIFKQLCKDCNGTFGTLAQAVAEMQVPRTKSTRPVPSY 225
Query: 211 RGDLELS------EKMKIKVWVYKKTGEEKFPTLKKY------SDKAPSTDKFATHE-VK 257
+G L L + + I V Y KT K PT K+ + ST + E V
Sbjct: 226 KGFLTLGNPEMFEDALTIDVERYPKTMVAKAPTASKFVLKQGVQEATQSTATLSNGEGVP 285
Query: 258 VD-------------YEYKSVEDPS--KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKP 302
V+ Y+ P K V E+ KGY YG V IS ++ F+
Sbjct: 286 VEEGDGLAGIMTARTYQVNDENAPGGKKDVEREELSKGYEYGRTAVHISESDQNVTAFES 345
Query: 303 EKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVW 362
++ + ++GF R+ + N+ +++ N +A++A+S+L A+ E++ A+ R V
Sbjct: 346 KQGLDIIGFVTKVQYQRYLDISRANVIMSQKHNDKASMALSSLIHALYELDSYAVARLVP 405
Query: 363 RQGQQSVVVGVLTPNVSEKINIPD--SFYFNVLPFAEDVREFQFPSFSK-FPVSWQ---- 415
+ + V+ +L PN+ PD Y LPFAED+R ++FP + VS +
Sbjct: 406 KDMKDPKVI-ILAPNIE-----PDFECLYDIELPFAEDLRSYKFPPLDRVVTVSGKVLKV 459
Query: 416 ----PNEQQQEAADNLVKMLDLAPSGK------GEILQPELTPNPALERFYHHLELKSEH 465
P+++ Q+A + V ++L+ K E + T +P L R ++ ++ +
Sbjct: 460 HRNLPSDELQDAMSDYVDGMELSTFSKDDEGEDAEYAHFDETFSPMLHRLNQVIKHRAVY 519
Query: 466 QDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGS 525
+A P D L K P L+ +++ A++ +K+ P R +E P
Sbjct: 520 PEAGIPEPYDLLVKYAHPPEDLVEKARPALEKVIKAAEVKKVPPKAAGKRYSRKEAPK-- 577
Query: 526 DEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKN 585
+S+ + P I + +F ++ D + + A + ++N
Sbjct: 578 -------PLSNLDVTALLAQDPERKNKLIDPKNAVPEFRQIVENADDEEQLADACKQLRN 630
Query: 586 KIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFS----T 641
I+ +++S NY +A E + +R+G I + P +ND L ++
Sbjct: 631 IIYDWIKHSVGDSNYGRATEAIRVMREGMIELEFPGPYNDFLRELKGKTLGEELGGDRRE 690
Query: 642 FFDFLMSKKLSLISKSEAVDSDITDDEAGSFI 673
F+ + ++ I KSE S++T+ +A ++
Sbjct: 691 FWYRVRVHRMKPIMKSEVEISEVTEADAKQWM 722
>gi|255942515|ref|XP_002562026.1| Pc18g01820 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586759|emb|CAP94406.1| Pc18g01820 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 718
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 106/413 (25%), Positives = 183/413 (44%), Gaps = 35/413 (8%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRA 338
KGY YG VPI + + + L+GF R+ +M + N+ I + N A
Sbjct: 320 KGYEYGRTAVPIEQTDENVANLQTFAGMGLIGFVQKDQYDRYMHMSNTNIIIPQRANDYA 379
Query: 339 TVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAED 398
++A+S+L A+ E+ A+ R V ++ + ++V +L P++ + LPFAED
Sbjct: 380 SLALSSLIHALYELESYAVARLVTKESKPPMLV-LLAPSIEADY---ECLIEVQLPFAED 435
Query: 399 VREFQFPSFSK-FPVSWQ--------PNEQQQEAADNLVKMLDLAPSGKGEILQPELTPN 449
VR ++FP K VS + P+ ++A N V +D + +L +
Sbjct: 436 VRSYRFPPLDKIITVSGKVVTEHRNLPSVALKDAMSNYVDSMDFVTTNDEGQATDDLPID 495
Query: 450 PALERFYHHLELKSEHQDAAP--PPLDDS--LKKITEPDPTLLAESQSAIDAFCGQFVIK 505
+ H +E ++ P P LD S L + P ++ S+S ++ +K
Sbjct: 496 ESFSPLLHRIESAVRYRAVHPNDPVLDPSERLTEFAHPSEDMVKNSKSHLEKLMSIADVK 555
Query: 506 E-NPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFE 564
+ PK K R+ EKP S D A+ S+E K KI I +F+
Sbjct: 556 KVPPKTKGRKRQRETEKPL---------SGLDVDALLSLEPKRT----KISTENAIPEFK 602
Query: 565 AMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFN 624
+SR + D + A++ M I + +S NY + +E L +R+ + +EP +N
Sbjct: 603 QTLSRAENIDAIHDAVQQMAKIIESQITHSLGHSNYDRVIEGLGTMREELVDYEEPAVYN 662
Query: 625 DVLEKV-CKICRKR---NFSTFFDFLMSKKLSLISKSEAVDSDITDDEAGSFI 673
D + ++ K+ R+ + + F+ KL LI KSE S + + EA F+
Sbjct: 663 DFVRQLKGKMLREELGGDRRELWWFVRKGKLGLIGKSEVDSSAVEEQEAQEFL 715
>gi|427791695|gb|JAA61299.1| hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 573
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 123/482 (25%), Positives = 206/482 (42%), Gaps = 81/482 (16%)
Query: 208 TIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVED 267
T + +LE+ + I + Y K E K K+ K P T V+ D Y ++
Sbjct: 105 TPWNANLEIGPDISIPISSYIKVVEVKPKPWKQCVAKRP------TVPVRCDTVYYRNDE 158
Query: 268 PSKVVPPEQRIKGYRYGPQVVPISS---AEWEAVKFKPEKSVKLLGFTDASNILRHYYMK 324
V + I YRYG +VP + A E K + +++LGFTD +NI RHYYM
Sbjct: 159 KESEVEKDGTIPAYRYGSTLVPFTDENRAAMEGSKAGSGRGLQVLGFTDEANIKRHYYMG 218
Query: 325 D-VNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN 383
D + +A G+ A A+SAL +A+++ VAIVR + + + +G L+P + E+
Sbjct: 219 DKTSYVVARKGDESAGAALSALIQALRKSKMVAIVRYSF-SDKSAPRMGFLSPRIKERY- 276
Query: 384 IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQ----PNEQQQEAADNLVKMLDLAP---- 435
+ F LP+ ED+R F F P+ P + Q D+L+ +DL
Sbjct: 277 --ECLVFIQLPYMEDLRRFTF-----LPLDTNKDNIPTDTQLSLFDDLIAAMDLTAVDID 329
Query: 436 SGKGEILQPELTPNPALERFYHHLELKSEH-QDAAPPP---LDDSLKKITEPDPTLLAE- 490
E+ + T NP L+R Y ++ ++ H +D PP + D++K P ++E
Sbjct: 330 GEPEELFKSSQTSNPYLQRLYQCIQHRAMHPKDPLPPTPQYIADAIKT-----PKAVSEL 384
Query: 491 SQSAIDAFCGQFVIKENPKLKKSTRRFL------REKPSGSDEP---------------- 528
++ + F ++E +K + ++ S SDEP
Sbjct: 385 AEPVLKKIAAAFPLEEVSPVKAPQDNGVGPSDQNKDHVSNSDEPACKRARTDVXEEVSPV 444
Query: 529 -----NGDG---------SVSDAQAVN------SMESKPVVTVDKIGDLTPIQDFEAMMS 568
NG G S SD A SM K+ + P++DF+ ++S
Sbjct: 445 KAPQDNGVGPSDQNKDHVSNSDEPASKRARTDVSMAELVATATTKVDVVNPVEDFKKLVS 504
Query: 569 RRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLE 628
+D + E ++ I L +++ + KAV+ L A R+ + + P FN L+
Sbjct: 505 GKD--HSYSEVCEQLEEVILKLFKDALGRAAHGKAVQCLRAYRESALEKSNPNMFNAFLK 562
Query: 629 KV 630
K+
Sbjct: 563 KL 564
>gi|346327581|gb|EGX97177.1| Ku family DNA helicase, putative [Cordyceps militaris CM01]
Length = 730
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 159/694 (22%), Positives = 289/694 (41%), Gaps = 80/694 (11%)
Query: 45 VGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDYM--- 99
VGV+ T+ET N L + GYE++ VLQ++ + ++SL+ P T +GD +
Sbjct: 53 VGVVGLRTDETRNPLMAD-DGYENISVLQELGPMTMTSLKSLQTSIKPSKTYSGDAISAI 111
Query: 100 -----LIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV 154
+I + + K + + +ITDA + D+G +++ + G+ +
Sbjct: 112 VVAVDMIDTFTKKLKWTRKIVMITDAQSAIDPDDIGDIAHKINDSNITLTVLGVDFDD-- 169
Query: 155 VRASLSGEPHMRVIIENDNLLNIFSKKSSAKTL--FVDSTTSLRGARKTRDISPVTIFRG 212
E +N+ L + + + V++ + R + + P + G
Sbjct: 170 PEYGFKEEDKSPTKADNEKTLKSLADQCTGGVFASIVEAIDEIDTPR-VKQVKPYKTYDG 228
Query: 213 DLELSE------KMKIKVWVYKKTG-------------EEKFPTLKKYSDKAPSTDKFAT 253
L L + + I V Y KT E+ T ++ + D
Sbjct: 229 TLVLGDPEKFPSALNINVERYFKTHVARQIAASTVVLKSEQGGTQSTHTLEEEPMDGVEF 288
Query: 254 HEVKVDYEYKSVEDPS-----KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKL 308
VK YK V P K V E KG+ YG V IS +E K + KS +
Sbjct: 289 SAVKQARTYK-VNAPDAPGGKKDVEFETLAKGFEYGRTAVHISESEHNITKLETTKSFSI 347
Query: 309 LGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQS 368
LGF M DV + A + ++ +A+S+L + E+ A+ R V + G++
Sbjct: 348 LGFIPWDKWEPFLGMGDVCVTHARKFDEKSELAMSSLVWGLNELESYAVARLVTKDGKEP 407
Query: 369 VVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK-FPVSWQ--------PNEQ 419
++V +L P + ++ + Y LPFAEDVR ++FP K V+ + P ++
Sbjct: 408 ILV-LLAPGLEPEL---ECLYDIPLPFAEDVRAYKFPPLDKVITVTGKTLTTHRLLPTDE 463
Query: 420 QQEAADNLVKMLDLAPSGKGEILQP-ELTP-----NPALERFYHHLELKSEHQDAAPPPL 473
EA V +DL G + +P E P NP + R + ++ ++ + D +
Sbjct: 464 LNEAMGEYVDAMDLDSYGMDDQGEPAEFAPIDETYNPIIHRINNAVKQRAVYPDRPIEDI 523
Query: 474 DDSLKKITEPDPTLLAESQSAIDAFCGQFVIKEN-PKLKKSTRRFLREK--PSGSDEPNG 530
L + +P L+ Q I+ + +K+ P +ST +K P N
Sbjct: 524 PSVLLRYAKPPQDLIDRVQDRIENLIKEAEVKKGMPDSTQSTGHANHQKVPPKAKGRRNR 583
Query: 531 DGSVSDAQAVNSMESKPVVTVDKIGDLTP---IQDFEAMMSRRDCPDWVDKAIEDMKNKI 587
+ + ++ ++ ++ D G +TP + DF+ M+ + + A + M + I
Sbjct: 584 EA----VKPLSGLDVDALLGGDSKGQITPENAVPDFKRAMATSEEISDIQSAAKQMGDII 639
Query: 588 FGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKIC-------RKRNFS 640
L+ +S Y +AVE + +R I +EP+ FN ++ K+ +R+F
Sbjct: 640 KSLITDSFGDSKYAQAVECIGVMRDELINMEEPEMFNAFARELKKMLLSGTLGGDRRDF- 698
Query: 641 TFFDFLMSKKLSLISKSEAVDSDITDDEAGSFIV 674
+F S +L LI +S++ S +T DEA ++
Sbjct: 699 -WFKVRWS-RLGLIEQSQSDVSKVTADEADEIVL 730
>gi|50551937|ref|XP_503443.1| YALI0E02068p [Yarrowia lipolytica]
gi|74634055|sp|Q6C7B9.1|KU80_YARLI RecName: Full=ATP-dependent DNA helicase II subunit 2; AltName:
Full=ATP-dependent DNA helicase II subunit Ku80
gi|49649312|emb|CAG79022.1| YALI0E02068p [Yarrowia lipolytica CLIB122]
Length = 726
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 131/524 (25%), Positives = 232/524 (44%), Gaps = 62/524 (11%)
Query: 33 IQKKLIYGKNHEV-GVILFGTEETENELTKEVGGYEHVKVLQDIKVVD-GHLVQSLKHL- 89
I K++ G+ +V G++ T+ T+N + +E G+EH+ ++ I+ + L+++ K L
Sbjct: 44 ISNKILSGRKTDVVGLVGVHTDTTQN-MFEEESGFEHIDIITPIQQFNLDTLLEAKKQLV 102
Query: 90 PQGTCAGDYM--------LIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIAR 141
P GD + +IK Y + K +++ ++T+ + D G Q++
Sbjct: 103 PNSDNKGDLISGIVVAVQMIKLYTKALKYIRNIVVLTNGQGNMNLGDSGGIIKQLNENRI 162
Query: 142 QMVAFGLRMKNIVVRASLSGEP-HMRVIIENDNLLNIFSKK--SSAKTLFVDSTTSLRGA 198
+ G+ + V +P H R EN+ L F + S + ++ SL
Sbjct: 163 ILKVMGVDFDDEEVDYFEEDKPEHKR---ENELKLKEFVDRCEDSVFATYKEARDSL-DI 218
Query: 199 RKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHE--- 255
K + ++PV F+G+L LS+ + G E FP ++ + S+ + E
Sbjct: 219 PKVKAVNPVRAFQGNLVLSDPEQQPPQRVMSIGVEVFPCTRRATAMTASSYAMSKIEPAT 278
Query: 256 -----------VKVDYEYKSVEDPSKVVPPEQRIK-----GYRYGPQVVPISSAEWEAVK 299
VK D +Y V D S + ++ + GYRYG ++V I+ E EA+
Sbjct: 279 ISTPSQNNLQAVKWDRQY-YVNDESGIGGKKELDRDTLENGYRYGSEIVYITKEEEEAIM 337
Query: 300 FKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVR 359
F S++++GF + ++ + M + I + GN+R VA+SA ARA+ E + + R
Sbjct: 338 FPTSASLQVIGFVNKKSVPPYMLMGHTDYIIGQRGNNRDAVAISAFARALFETDNFGLAR 397
Query: 360 CVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPV------- 412
V + G+ +V VL P + ++ + F LPFAED R+F PS +
Sbjct: 398 YVNKDGKDPQIV-VLMPYIRAEL---EGLVFCQLPFAEDERKFILPSLTSLETRSGNKTV 453
Query: 413 ----SWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLE------LK 462
P ++ +A D+ V +DL+ KGE +P LT HH+
Sbjct: 454 TTHSRLLPTKEMLDAMDDYVDAMDLSKL-KGEDDEPWLTMEECFNPSIHHIRNVVKECAV 512
Query: 463 SEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKE 506
S+ P PL L + ++P L E++ ++ F IKE
Sbjct: 513 SQDYGKIPEPL-PILTRFSQPAEELTEEAKPQLELLKHLFDIKE 555
>gi|213409423|ref|XP_002175482.1| Ku80 [Schizosaccharomyces japonicus yFS275]
gi|212003529|gb|EEB09189.1| Ku80 [Schizosaccharomyces japonicus yFS275]
Length = 686
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 162/676 (23%), Positives = 269/676 (39%), Gaps = 78/676 (11%)
Query: 28 LCSRLIQKKLIYGKNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLK 87
L RL++ K K +G++ F T+E+ N+L E Y ++ V I+ +Q L+
Sbjct: 40 LSQRLLENK----KTDVIGIVGFKTDESRNDLV-EQEAYWNIAVFYPIQTAKFAQLQDLR 94
Query: 88 HLPQG--TCAGDYM--------LIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVS 137
T GD + LI +Y + K K L + T A + D
Sbjct: 95 PRLSASKTMQGDLLSAIVVSFDLIGRYCKANKWTKELFIGTGARGTIDFEDS-------D 147
Query: 138 TIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRG 197
IA Q+ + + + R L E H DN L F +K + K L +
Sbjct: 148 GIAEQIAQHDVHITLGLTR-DLKLERHTY-----DNQLLQFLEKCNGKLLTAQNLMEEAQ 201
Query: 198 ARKTRDISPVTIFRGDLELSE------KMKIKVWVYKKTGEEKFPTLKKYSDKA-PSTD- 249
R + PV IFRG L L + + Y T K P + A PS D
Sbjct: 202 RPPIRKVKPVPIFRGILSLGNPQDPDASLAFPIERYPYTRIAKPPVSTAFDASAKPSADP 261
Query: 250 ------------KFATHE-----VKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISS 292
H ++ + V+D + V + GY YG ++PISS
Sbjct: 262 SGADNDEVMSQPNLGMHSDVVSTIRTYVVHDPVKDETFEVDRKDLESGYSYGRTIIPISS 321
Query: 293 AEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEM 352
+ + + + +++LGF S Y+M + NL + + + + +++ AM +
Sbjct: 322 TDEDIMSLDTQAGLEVLGFAPKSCFPPFYFMSETNLIVNKKDDEQTATQLTSFVEAMIQE 381
Query: 353 NKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPV 412
++ A+ R V + +++ VL P++ N LP+AEDVR F FPS
Sbjct: 382 DRYALARFVNKNHNGPILL-VLIPHIE---NGTHCLIDVQLPYAEDVRAFSFPSLEHV-T 436
Query: 413 SWQPNEQQQEAADNLVK--MLD---LAPSGKGEILQPELTPNPALERFYHHLELKSEHQD 467
+ + + Q A D V +LD + S K + +P+ + + R ++ + H +
Sbjct: 437 TGEEKMRVQNAVDAYVSSMLLDNPAIQQSSKAPVFEPQFSYSVMRHRIQQAIQHYAFHPN 496
Query: 468 AAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQF--VIKENPKLKKSTRRFLREKPSGS 525
A P L T L +Q A++ G ++ E PK++ + + S S
Sbjct: 497 APLPEPSPYLVHYTHAPEAALRNAQDALNTLQGVLEPIVHEAPKVEPAEKESQVSVLSIS 556
Query: 526 DEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKN 585
D S A+ E +PV+ V P+ F ++ P +D AI +M++
Sbjct: 557 DAEIEAMLNSTAEEQLETEKEPVLHVSASD---PVYTFYELIKN---PFGLDDAITEMES 610
Query: 586 KIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDV---LEKVCKICRKRNFSTF 642
I LL EG A E L+ALR+ CI E E +Q+N L+ + +N F
Sbjct: 611 AIRLLL---TEG-KLDSAKESLIALRETCIREDESEQYNGFIVELQNELISGKYQNAMNF 666
Query: 643 FDFLMSKKLSLISKSE 658
++ + L IS E
Sbjct: 667 EQLILQQHLGSISFDE 682
>gi|302917037|ref|XP_003052329.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256733268|gb|EEU46616.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 694
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 123/516 (23%), Positives = 223/516 (43%), Gaps = 54/516 (10%)
Query: 45 VGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDYM--- 99
VGV+ F T+ET+N+L + GYE++ VLQ++ + +++L+ + P T +GD +
Sbjct: 53 VGVVAFRTDETDNKLQDD-DGYENIAVLQELGPMSMSSLRNLQSVIKPSETWSGDAISAI 111
Query: 100 -----LIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV 154
++ + + K + + LITD P+ + +++ Q+ G+ N
Sbjct: 112 VVAVDMMDTFTKKLKWNRKIILITDGQGPMDADGLSDISKKMNDSNIQLTVLGVDFDNPD 171
Query: 155 VRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDL 214
+P+ + E L + ++ ++ L R + + P + G L
Sbjct: 172 YGFKEEDKPNTKEENEKSLKLLVDDCQNGVFATIAEAIDELDTPR-IKSVKPYKTYDGTL 230
Query: 215 ELSE------KMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVD----YEYKS 264
L + MKI V Y KT + T K+ T +T V+ D E+ +
Sbjct: 231 TLGDPERFPSAMKINVERYFKTHLARPLTASTVVVKSEGTGSESTQAVEGDEMEGVEFSA 290
Query: 265 VE--------DPS-----KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGF 311
V DP + V E KG+ YG V IS +E K + +KS ++GF
Sbjct: 291 VRQARSYKVNDPDAPGGKRDVEFEDLAKGFEYGRTAVHISESEHNITKIETQKSFSIVGF 350
Query: 312 TDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVV 371
S + +V + +A ++++ +A S+L A+ E+ I R V + G+ +V
Sbjct: 351 IPCSKYEPFLNLGEVCVTVASKFDAKSALAFSSLVWALSELESYGIARIVPKDGKDPQLV 410
Query: 372 GVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK-FPVSWQ--------PNEQQQE 422
++ P V + + Y LPFAED+R +QFP + VS Q P ++ +
Sbjct: 411 -LVAPGVEPDM---ECLYDIPLPFAEDIRSYQFPPLDRVITVSGQTITKHRFLPTDELND 466
Query: 423 AADNLVKMLDLAPSGKGEILQP-ELTP-----NPALERFYHHLELKSEHQDAAPPPLDDS 476
A + V +DL+ G + +P E P NP + R H ++ ++ + + P
Sbjct: 467 AMSDYVDAMDLSTYGIDDEGEPAEFAPIDDTFNPTIHRINHAVKSRAVYPEKPIPDTPSI 526
Query: 477 LKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKK 512
L + P L+ + QS ID+ +K+ P+ K+
Sbjct: 527 LLRFASPPEDLIEKVQSKIDSLVEVADVKKVPEFKQ 562
>gi|318054306|gb|ADV35595.1| X-ray repair complementing defective repair 5, partial [Brachionus
ibericus]
Length = 674
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 145/620 (23%), Positives = 276/620 (44%), Gaps = 82/620 (13%)
Query: 7 ALLLLLDVSPSMHS-------VLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENEL 59
L+L+LDV +M + L + ++Q+K+ E+G+ +FG ++T+NEL
Sbjct: 5 GLVLVLDVGETMSTKINRTTTYLQSCVDIIQMIVQRKMFQSSKDEIGLTVFGCDQTDNEL 64
Query: 60 -TKEVGGYEHVKVLQDIKVVDGHLVQSLKH-----------LPQGTCAGDYMLIKKYGET 107
+ HV +++ + +VD ++ +++ L A ++ + +T
Sbjct: 65 WDGSSDDFRHVSLVRCLSIVDWEMLDYVQNKIVVSNIRGDVLDGILVALNHFADDQNKKT 124
Query: 108 YKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV------------- 154
+K K+ + L + C + D KE I + + +R+ I
Sbjct: 125 FKEKRVIVLTDFSSCS--NDDFKLKE-----IGKNLARQSIRLDVISPFSEDDVNKEEKP 177
Query: 155 --VRASLSGEPH----MRV-IIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDI-SP 206
S S + H M + +E NLLN +++ D T SL + R I S
Sbjct: 178 NSETKSNSDDHHSSKQMTIGQVETLNLLNNLCEQAEGCLFSFDETLSLLSTYQARTIKSS 237
Query: 207 VTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVE 266
T ++ + + EK + + K E K P + ++ K + D+ E+K D + +
Sbjct: 238 GTKYQ--MTIGEKFALPIVSLIKCKESK-PEIFRFK-KVFAKDENV--ELKTDRARFTKD 291
Query: 267 DPSKVVPPE-QRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKD 325
D + + + + ++YG VPI S + ++K + EK +LGFT + N+ +HY+ D
Sbjct: 292 DEQRDLNDKTDTVDAFKYGSTYVPIDS-DTVSLKLEVEKCFNILGFTKSENVHKHYFSGD 350
Query: 326 -VNLFIAEPGN-SRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN 383
VN + +P + ++ A + RAM E + IVR V+ + S +G L P V+++
Sbjct: 351 SVNQIMPDPSSGAQVEEAFVNMVRAMFEEDVFGIVRKVF-NSRSSPEMGCLIPYVTKETT 409
Query: 384 IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLA---PSGKGE 440
FY + LPF +D+++ +FS ++PN++Q D+L+ LDL+ + E
Sbjct: 410 CL--FYLS-LPFDDDLKKITLENFSIMK-KFKPNDKQLSLVDDLIDSLDLSRKIDQDEEE 465
Query: 441 ILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCG 500
+ P T NP ++R + + L++ + P D+ + T LA+ S I
Sbjct: 466 LYDPHTTFNPYIQRMFQSIALRATNPSDELPNFDEHITN------THLAKIGSRIRNNTT 519
Query: 501 QFVIK----ENP------KLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNSMESK-PVV 549
Q ++K E P K +K R+++ + + E S++D + +ES
Sbjct: 520 QNILKRIQDEFPLRELVKKGEKKRRKYIEKTKIENKEEVELISMNDENLTDILESGLESN 579
Query: 550 TVDKIGDLTPIQDFEAMMSR 569
V K+G + P+ DF+ + +
Sbjct: 580 KVKKVGTVNPVGDFKILAEK 599
>gi|336378342|gb|EGO19500.1| hypothetical protein SERLADRAFT_363906 [Serpula lacrymans var.
lacrymans S7.9]
Length = 811
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 134/558 (24%), Positives = 236/558 (42%), Gaps = 88/558 (15%)
Query: 33 IQKKLIYG-KNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ 91
IQ+ + G K + GVI+FG+E+T+N + + GGYEHV + + + L L
Sbjct: 36 IQEMIFNGRKTDQCGVIVFGSEDTDNVINDKSGGYEHVSEYIPVAQPNAGTLTKLDALSP 95
Query: 92 GTCAGD-----YMLIKKYGETYKGK----KHLCLITDALCPLKDPDVGTKEDQVSTIARQ 142
GD + I+ + K + + L+TD P++ D ++ +++
Sbjct: 96 SEVTGDPVDALIVGIETQDQYLSSKRTWTRKIVLLTDGENPIEIEDWEATVQKMDSLSIA 155
Query: 143 MVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTR 202
+ G+ + L E + I+ +N L + K +++ V T +L +R
Sbjct: 156 LTVVGVDFDD----EELPFEEENKSTIKAENEL-FYKKLTTSLQSGVMGTCALALQEISR 210
Query: 203 -DISPV------TIFR-GDLEL--SEKMKIKVWVYKKTGEEKFPTLKKYSDKAPS----- 247
+I V T+ R GD++ E +++ V K T + KK++ +
Sbjct: 211 PEIKQVKSTLMGTVIRLGDVDGRPDEAIEVLVKASKCTALTRPKGWKKFASRQAGDDEYE 270
Query: 248 --------TDKFATHEVKVDYEYKSV-------------------EDPSKVVPPEQRIKG 280
T FA +++ +Y ++ S+ V EQ I+G
Sbjct: 271 GGEEDEDRTVSFAQLKMRTEYYIDHGEHEDEDDESEDGDKSPTGKDENSEKVEKEQLIRG 330
Query: 281 YRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATV 340
++YG P ++ + +K + + GF A N R M +V A+P +++ V
Sbjct: 331 FKYGTTYAPCPDGQFP--RLPTQKGMDICGFFQARNFRRELAMGEVQYIWADPSSAQQQV 388
Query: 341 AVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVR 400
A+S++ +AM E + +AI R V + G +GVL P+V +KI D + +PFA+DVR
Sbjct: 389 ALSSIVQAMYEKDVLAIARWVTKDGMDP-KMGVLAPSVFDKI---DCLLWVQMPFADDVR 444
Query: 401 EFQFPSFS-----------KFPVSWQPNEQQQEAADNLVKMLDLAPSGKGE-------IL 442
++ F S K P + P + Q A +N V +DL +G +
Sbjct: 445 KYNFASLDYLMSKKGERIMKHP--YIPTDDQLSAMENFVDAMDLMDAGDKDEEGNRYPWF 502
Query: 443 QPELTPNPALER----FYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAF 498
L+ NPA+ R +H + + PPP + LK EP +L ++ AI+
Sbjct: 503 DTRLSYNPAVHRTKQALFHSAVVNDLITNPIPPPHPELLKYF-EPPKKVLKRARDAIEDC 561
Query: 499 CGQFVIKENPKLKKSTRR 516
F +KE PK R+
Sbjct: 562 KQAFKVKEVPKKVARARK 579
>gi|46124687|ref|XP_386897.1| hypothetical protein FG06721.1 [Gibberella zeae PH-1]
Length = 693
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 164/682 (24%), Positives = 283/682 (41%), Gaps = 114/682 (16%)
Query: 45 VGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDYM--- 99
VGV+ T++T N+L + GYE++ VLQ++ + ++ L+ P T AGD +
Sbjct: 53 VGVLGLRTDDTYNKLQDD-DGYENITVLQEMGPMTMSSLRDLQSAVKPSNTWAGDAVSAI 111
Query: 100 -----LIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV 154
++ + + K + + LITD DPD G KE+ G + N
Sbjct: 112 VVAIDMMDTFTKKLKWNRKIFLITD---DFDDPDYGFKEEDKP---------GTKEDNEK 159
Query: 155 VRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDL 214
+L+ +D +F+ + A +D + R + + P + G L
Sbjct: 160 ALKALA----------DDCKDGVFANIAEA----IDELDTPR----IKGVKPYKTYDGAL 201
Query: 215 ELSE------KMKIKVWVYKKT--------------GEEKFPTLKKYSDKAPSTDKFATH 254
L + M I V Y KT E+ T + D+ + A
Sbjct: 202 TLGDPETFPAAMSINVERYFKTHLARPLTASTVVVKSEDGEATQQTQDDEMEGIEFLAVK 261
Query: 255 EVKVDYEYKSVEDPS-----KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLL 309
+ + YK V DP + V + KGY YG V IS +E K +KS ++
Sbjct: 262 QAR---SYK-VNDPDAPGGKRDVEFDDLAKGYEYGRTAVHISESEHNITKIDTQKSFSII 317
Query: 310 GFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSV 369
GF + + + + IA ++++T+A+S+L A+ E+ AI R V + G+ +
Sbjct: 318 GFIPCAKYEPFLNIGETCVTIARKFDAKSTIALSSLVWALSELESYAIARIVTKDGKDPL 377
Query: 370 VVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK-FPVSWQ--------PNEQQ 420
+V +L P V + + Y LPFAED+R +QFP + V+ Q P ++
Sbjct: 378 LV-LLAPGVEPDM---ECLYDIPLPFAEDIRSYQFPPLDRVITVTGQTVSKHRLLPTDEL 433
Query: 421 QEAADNLVKMLDLAPSGKGEILQP-ELTP-----NPALERFYHHLELKSEHQDAAPPPLD 474
+A + V +DL+ G + P E P NP + R H ++ ++ + + P
Sbjct: 434 NDAMSDYVDAMDLSTYGMDDDGNPSEYVPIDETFNPTVHRVNHAVKARAVYPEKPVPDTP 493
Query: 475 DSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKP-SGSDEPNGDGS 533
L + +P L+ + QS DA +K+ P K R KP SG D
Sbjct: 494 SILLRFAQPTQDLIEKVQSKTDALIQAADVKKVPPKVKGKRGRETIKPISGLD------- 546
Query: 534 VSDAQAVNSM--ESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLL 591
V+++ E K ++ D + +F+ ++ + ++ A + M I +
Sbjct: 547 ------VDALLGEKKSEISSDN-----AVPEFKRALAVTEDVSEIEDATKQMGMIISTFV 595
Query: 592 ENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKV-CKICRKRNFSTFFDFLMSKK 650
S G YP+A+E L +R+ I +EP +N + ++ K+ DF +
Sbjct: 596 TESFGGDKYPRALECLGVMREELINLEEPGFYNTFMREMKKKLISGDMGGGRLDFWFKVR 655
Query: 651 ---LSLISKSEAVDSDITDDEA 669
L LI ++ SD+T DEA
Sbjct: 656 WAHLGLIDNKQSDVSDVTPDEA 677
>gi|261203883|ref|XP_002629155.1| protein Ku80 [Ajellomyces dermatitidis SLH14081]
gi|239586940|gb|EEQ69583.1| protein Ku80 [Ajellomyces dermatitidis SLH14081]
gi|239608829|gb|EEQ85816.1| protein Ku80 [Ajellomyces dermatitidis ER-3]
Length = 727
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 158/698 (22%), Positives = 294/698 (42%), Gaps = 87/698 (12%)
Query: 41 KNHEVGVILFGTEETENELTK--EVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAG 96
K +GVI T++T N L + E Y ++ V Q I + ++ L+ L P T G
Sbjct: 49 KTATLGVIGLKTDDTNNPLWEKDEEESYANLSVFQGISQILMSQIRDLRGLIKPSHTTEG 108
Query: 97 DYM--------LIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQ---MVA 145
D + +I +Y + K K+ + L+TD + D+ E VS I + +V
Sbjct: 109 DAISSLILAIDMIVRYCKKLKYKRKIVLVTDGTGAM---DIDGIEGIVSKINEENIELVI 165
Query: 146 FGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDIS 205
G+ + E + +N+N L + ++ S +T+ +
Sbjct: 166 LGVDFDD--PEYGFKEEDKDPLKAKNENHLKQLVEDCEGIYGTLEHAISEMEIPRTKVVR 223
Query: 206 PVTIFRGDLEL------SEKMKIKVWVYKKTGEEKFPTLKKY------SDKAPSTDKFAT 253
+ F+GDL L S + I+V Y +T + P + S+ +T AT
Sbjct: 224 SMPTFKGDLRLGDPEQYSSALSIQVERYYRTYAARPPAASSFVSSAVLSEGQETTQSSAT 283
Query: 254 HEVK--------VDYEYKSVEDP-------------SKVVPPEQRIKGYRYGPQVVPISS 292
K V SV + + V ++ KGY YG V I+
Sbjct: 284 LAAKESSQEGGAVASALTSVRNARTYQVNDEEAAGGKRDVERDELAKGYEYGRTAVHITE 343
Query: 293 AEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEM 352
++ K + + +++ +GF + R+ M N+ IA+ N++A +A+S++ A+ E+
Sbjct: 344 SDENITKLETDAALEFIGFIPSDKYDRYMNMSTSNIIIAQKTNNKAILALSSIIHALFEL 403
Query: 353 NKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK-FP 411
A+ R V + G+ +VV +L P++ + LPFAEDVR ++FP K
Sbjct: 404 ECCAVGRLVPKAGKAPLVV-LLAPSIEADY---ECLLEVQLPFAEDVRSYRFPPLDKVIT 459
Query: 412 VSWQPNEQQQEAADN--LVKMLDLAPSGK-------GEILQP---ELTPNPALERFYHHL 459
VS + + + +N L +M D S + GE ++ E + +P L R +
Sbjct: 460 VSGKTVTEHRNLPNNNLLSRMADYVDSLELTEKDEDGETVESMSIEDSFSPLLHRIDQAI 519
Query: 460 ELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLR 519
++ H PP+ + L+K++ L A+S+ + +K+ P K R
Sbjct: 520 RWRAVHPSEPLPPVPEILQKLSHQPEDLQAQSKDTLAKLIAASDVKKVPPKAKG-----R 574
Query: 520 EKPSGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKA 579
++ +D+P +S ++++ V KI I +F+ ++ V A
Sbjct: 575 KRDRDTDKP-----LSGLNVEELLQTEKRV---KISANNAIPEFKQLLVSSQDLGAVKDA 626
Query: 580 IEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLE----KVCKICR 635
++ M I + +S NY +AVE L +++ + +EP +ND + K+
Sbjct: 627 VKQMSAIIESQIRHSLGDANYDRAVEGLGTMKEELVAFEEPALYNDFIRGLKVKLLGNDL 686
Query: 636 KRNFSTFFDFLMSKKLSLISKSEAVDSDITDDEAGSFI 673
+ + ++ +L LI K + SD+T++EA +F+
Sbjct: 687 GGDRREMWWYIRKNRLGLIDKKLSELSDVTEEEARAFL 724
>gi|346467801|gb|AEO33745.1| hypothetical protein [Amblyomma maculatum]
Length = 344
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 166/357 (46%), Gaps = 33/357 (9%)
Query: 282 RYGPQVVPISS---AEWEAVKFKPEKSVKLLGFTDASNILRHYYMKD-VNLFIAEPGNSR 337
RYG +VP + A + K + +++LGFTD SNI RHYYM D + +A G+
Sbjct: 1 RYGSTLVPFTDENRAAMDGNKGGSGRGLQVLGFTDESNIKRHYYMGDKTSYIVARKGDDC 60
Query: 338 ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAE 397
A A+SAL +A+K+ VAIVR + + + +G L+P + E+ + F LP+ E
Sbjct: 61 AGAALSALIQALKKSKMVAIVRYAF-SDKSAPRMGFLSPRIKERY---ECLVFIQLPYME 116
Query: 398 DVREFQFPSFSKFPVSWQ----PNEQQQEAADNLVKMLDLAP---SGKG-EILQPELTPN 449
D+R F F P+ P + Q D+L+ +DL +G+ E+ + T N
Sbjct: 117 DLRRFTF-----LPLDTNKDNVPTDMQLSLFDDLIAAMDLTAVDINGEPEELFKSSQTSN 171
Query: 450 PALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPK 509
P L+RFY ++ ++ H PP+ + + ++A ++ + QF ++E
Sbjct: 172 PYLQRFYQCVQHRAMHPKDPVPPIPQHIADAIKTPKAVMALAEPILQKIASQFPLEEVAP 231
Query: 510 LKKSTRRFL------REKPSGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDF 563
+K + +++ + DEP + +D SM K+ + P++DF
Sbjct: 232 VKVPQDNGVGPNDHGKDQATNLDEPAPKRARTDV----SMADLVATATTKVDVVNPVEDF 287
Query: 564 EAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEP 620
+ ++S ++ + ++ I L +++ + KAV L A R+ + + P
Sbjct: 288 KKLVSSKE--QSYSEVCHQLEEVILKLFKDALGRTAHGKAVRCLRAYRESALEKTSP 342
>gi|154278066|ref|XP_001539857.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150413442|gb|EDN08825.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 710
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 124/530 (23%), Positives = 239/530 (45%), Gaps = 87/530 (16%)
Query: 200 KTRDISPVTIFRGDLEL------SEKMKIKVWVYKKT-------------------GEEK 234
+T+ + + F+GDL L S + I+V Y +T G+E
Sbjct: 196 RTKVVRSMPTFKGDLRLGDPDQYSSALTIQVERYYRTYAARPPPASSFVSSSALSEGQET 255
Query: 235 FPTLKKYSDKAPSTDKFA------------THEVKVDYEYKSVEDPSKVVPPEQRIKGYR 282
+ + K PS ++ A T++V + K + V ++ KGY
Sbjct: 256 AQSSATLAAKEPSQERGAGAASLTAVRNARTYQV----DDKGAAGGKRDVARDELAKGYE 311
Query: 283 YGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAV 342
YG V I+ ++ K + E +++ +GF + N R+ M N+ IA+ N++A +A+
Sbjct: 312 YGRTAVHITESDENITKLETEAALEFIGFIPSDNYDRYMNMSTSNIIIAQKTNNKAILAL 371
Query: 343 SALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD--SFYFNVLPFAEDVR 400
S++ A+ E+ A+ R V + G+ +VV +L P++ PD F LPFAED+R
Sbjct: 372 SSIIHALFELECYAVARLVPKAGKSPLVV-LLAPSIE-----PDYECFLEVQLPFAEDMR 425
Query: 401 EFQFPSFSK-FPVSWQP-NEQQQEAADNL-------VKMLDLAPSGK-GEILQPELTPN- 449
++FP K +S + E + +D+L V L+L + GE ++ L N
Sbjct: 426 SYRFPPLDKVVTISGKTVTEHRNLPSDSLLSRMAEYVDSLELTEKDEDGETIESMLIENS 485
Query: 450 --PALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKEN 507
P L R H + ++ H PP+ + L+K++ L A+S++++ +K+
Sbjct: 486 FSPLLHRIDHAIRWRAVHPSEPLPPVPEILQKLSRQPEDLQAQSENSLANLIATSDVKKV 545
Query: 508 PKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTP---IQDF- 563
P K R++ D+P ++ + + ++ +K ++P I +F
Sbjct: 546 PPKAKG-----RKRDREIDKP-----------LSGLNVQELLQTEKRVKISPDNAIPEFK 589
Query: 564 EAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQF 623
++++S +D D V A++ M + I + +S NY +A+E L +++ + +EP +
Sbjct: 590 QSLVSSQDI-DAVKDAVKQMSSIIESQIRHSLGDANYDRAIEGLGTMKEELVAFEEPALY 648
Query: 624 NDVLEKVCKICRKRNFS----TFFDFLMSKKLSLISKSEAVDSDITDDEA 669
ND + + + + ++ +L LI K + SD+T++EA
Sbjct: 649 NDFIRNLKTKLLGNDLGGDRREMWWYIRKNRLGLIDKRLSELSDVTEEEA 698
>gi|425768972|gb|EKV07482.1| ATP-dependent DNA helicase II subunit 2 [Penicillium digitatum Pd1]
gi|425770556|gb|EKV09025.1| ATP-dependent DNA helicase II subunit 2 [Penicillium digitatum
PHI26]
Length = 711
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 103/412 (25%), Positives = 183/412 (44%), Gaps = 34/412 (8%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRA 338
+GY YG VPI E + + L+GF R+ +M + N+ I + N A
Sbjct: 314 RGYEYGRTAVPIEQTEENVANLQTFAGMGLIGFVQKDQYDRYMHMSNTNIIIPQRANDNA 373
Query: 339 TVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAED 398
++A+S+L A+ E+ A+ R V ++ + ++V +L P+V + LPFAED
Sbjct: 374 SLALSSLIHALYELESYAVARLVTKESKPPMLV-LLAPSVEAD---HECLIEVQLPFAED 429
Query: 399 VREFQFPSFSK-FPVSWQ--------PNEQQQEAADNLVKMLDLAPSGKGEILQPELTPN 449
VR ++FP K VS + P+ ++A + V +D + +L +
Sbjct: 430 VRSYRFPPLDKIITVSGKVVTEHRNLPSAALKDAMSDYVDSMDFVTTNDEGEPTDDLPID 489
Query: 450 PALERFYHHLELKSEHQDAAP--PPLDDS--LKKITEPDPTLLAESQSAIDAFCGQFVIK 505
+ H +E ++ P P LD S L + + ++ S+S ++ +K
Sbjct: 490 ESFSPLLHRIESAVRYRAVHPNDPVLDPSERLTEFAQLSVDMVKNSKSHLEKLMSIADVK 549
Query: 506 ENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEA 565
+ K R+ EKP S D A+ S+E K KI I +F+
Sbjct: 550 KGEPTKGRKRQRETEKPL---------SGLDVDALLSLEPKRT----KISTENAIPEFKQ 596
Query: 566 MMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFND 625
+SR + D + A++ M I + +S NY + +E L +R+ + +EP +ND
Sbjct: 597 TLSRAENIDAIHDAVQQMAKIIETQITHSLGHSNYDRVIEGLGTMREELVDYEEPVVYND 656
Query: 626 VLEKV-CKICRKR---NFSTFFDFLMSKKLSLISKSEAVDSDITDDEAGSFI 673
+ ++ K+ R+ + + F+ KL LI+KSE S + ++EA F+
Sbjct: 657 FVRQLKAKMLREELGGDRRELWWFVRKGKLGLIAKSEVDSSAVEEEEAQEFL 708
>gi|193083083|ref|NP_001122374.1| zinc finger protein ZF(C2H2)-102 [Ciona intestinalis]
gi|93003104|tpd|FAA00135.1| TPA: zinc finger protein [Ciona intestinalis]
Length = 710
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 178/394 (45%), Gaps = 49/394 (12%)
Query: 210 FRGDLELSEKMKIKVWVYKKTGEEKFP-TLKKYSDKAPSTDKFATHEVKVDYEYKSVEDP 268
++ +L L + I Y KT E K T KK K + ++ + Y +D
Sbjct: 257 WKCNLTLGSHLSIPCCAYIKTKEAKLKQTWKKCHAKTHKKE-----DITSNIFYYIDDDE 311
Query: 269 SKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKP-EKSVKLLGFTDASNILRHYYMKD-V 326
V E KGY+YG ++ + + + +KF +K + +LGFTD N+ ++M D
Sbjct: 312 KTEVTKENLGKGYKYGKDIITFGTEDEKQMKFAACDKCLSILGFTDMRNVHVIHHMDDQA 371
Query: 327 NLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD 386
++ I E G+ A A+SAL AM + N A+ V+R+G +V +L K+ +
Sbjct: 372 HVVIPEAGDEHAGTALSALCTAMVKQNLCAVACHVYRKGSNPKLVALLP-----KVKLGS 426
Query: 387 SFYFNV-LPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPE 445
+ V LPFAEDVR F S + QP+E+Q + A++L+ +D S G I + +
Sbjct: 427 HYLVMVSLPFAEDVRPLSFESLFSGK-NKQPSEEQLQLAEDLISSMDFTQSEDG-IFKAK 484
Query: 446 LTPNPALERFYHHLELKSEHQDAAPPPLDDSLK-KITEPDPTLLAESQSAIDAFCGQFVI 504
NP +R + L+ + +H D+ P L+ + ++ PT + ++ +D +F +
Sbjct: 485 EKMNPTFQRTFQCLDHRLKHPDSKLPDLNQLINDSVSISHPTSV---ETLLDKINEKFPV 541
Query: 505 KENPKLKKSTRRFLREKPSGSDEP--NGDGSVSDAQAVNSMESKPVVTVD---------K 553
L +KP S E N V+D E KP V+V
Sbjct: 542 ------------ILNKKPQTSHEAWINNKSDVADPDK----EEKPGVSVSAHIRNEQTTS 585
Query: 554 IGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKI 587
IG +T QDF ++ P ++A + M+ +I
Sbjct: 586 IGTVTTDQDFVEILQNGSLPS--NEAFDQMEQRI 617
Score = 42.4 bits (98), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Query: 2 ARTREALLLLLDVSPSMHSVLPDVEK---LC----SRLIQKKLIYGKNHEVGVILFGTEE 54
A +EALLL LDV M + LC S L+Q+K+ EV ++LFGT E
Sbjct: 3 ASKKEALLLCLDVGTGMKDSTNNQSTSLDLCIHVISTLVQRKIFSQSKDEVSLVLFGTNE 62
Query: 55 TENELTKE 62
T N L +E
Sbjct: 63 TSNPLNQE 70
>gi|449669936|ref|XP_002157022.2| PREDICTED: uncharacterized protein LOC100208923 [Hydra
magnipapillata]
Length = 1177
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 150/310 (48%), Gaps = 16/310 (5%)
Query: 327 NLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD 386
++F+A+P + A VA SAL RA+ E N VAIVR V R +G LTPN+ +
Sbjct: 69 HIFVAQPDDEYAAVAFSALCRALDEKNMVAIVRYVSRSNNDP-KIGFLTPNIKSSY---E 124
Query: 387 SFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPEL 446
S F LPF ED+R +QF SF +P+E+ A D+ + + L + E+ P+
Sbjct: 125 SLLFIALPFKEDIRHYQFASFKNVK---EPSEEAIAAMDSFIDSMTLIKND-TELFNPKD 180
Query: 447 TPNPALERFYHHLELKSEH-QDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIK 505
NP ++R + ++ ++ + D P +++ + P +LA +Q F ++
Sbjct: 181 LVNPYMQRQFQCIQHRALNPDDTTIPEVEEYIASSLRVIPEMLANAQEQASIIKKNFPLQ 240
Query: 506 ENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEA 565
E + +K+ F ++ +D D ++ D ++ + + S + ++G P+ DF
Sbjct: 241 ELKQKEKNVNMF--QQGGINDTEYNDNNMGDNESRDFLSSLTKSCLKEVGTADPVNDFLT 298
Query: 566 MMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFN- 624
++ D +V+ E M+ I L+ NS + KA++ LR+ I ++ K +N
Sbjct: 299 LIENADNDKFVE-VCEQMRKSILKLVLNSFLSQYFIKAIQATKTLREQSIAKRVSKVYNA 357
Query: 625 ---DVLEKVC 631
D+ E+ C
Sbjct: 358 LLYDLKEETC 367
>gi|384497794|gb|EIE88285.1| hypothetical protein RO3G_12996 [Rhizopus delemar RA 99-880]
Length = 660
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 128/498 (25%), Positives = 213/498 (42%), Gaps = 81/498 (16%)
Query: 200 KTRDISPVTIFRGDLELSEK-----MKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATH 254
+ +++ P +RG L L + I + +Y + E K PT KYS + T+
Sbjct: 166 RVKEVRPTPSYRGFLYLGNPTHENYLAISINMYLRVKEVKLPTADKYSKLSTGPSHAVTY 225
Query: 255 EVKVDYEYKSVEDP-----SKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLL 309
E + Y + DP KVV E KG+R+G Q V +S+ E E K K +K + +L
Sbjct: 226 ETR--YTVNNTTDPMNNEIEKVVSKEDLEKGFRFGKQRVKVSAEEEEYGKLKTKKEMTIL 283
Query: 310 GFTDASNILRHYYMKDVNLFIAEPGNSRAT---VAVSALARAMKEMNKVAIVRCVWRQGQ 366
GF SN R YY+K + ++ G R T +A+SA+A A+ E + +A V+ V +
Sbjct: 284 GFIPKSNFPR-YYLKS-HPYVVAAGVHRPTESGMAISAIAYALHETDTLAFVKYV-SKDD 340
Query: 367 QSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADN 426
+ +G+L P E I + + +PFA DV + F S P + +++ + D
Sbjct: 341 GAPKIGLLFPCFDENITL---LQYVEVPFAGDVNTYIFRS---IPSVIKRDDEADKMMDE 394
Query: 427 LVKMLDLAPSGKGE---ILQPELTPNPALERFYHHLELKSEHQDAAPPPL-DDSLKKITE 482
L+ +DL E L P T NP R ++ ++ + A P + D +
Sbjct: 395 LIDEMDLNKLTDEEGNKYLDPNDTFNPVFWRINKAIKSRALNTSAPIPDMPKDFSPEFDT 454
Query: 483 PDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNS 542
P+P A + D F IK+ + EK D D ++
Sbjct: 455 PEP-FKARLKLISDKLASHFDIKK-----------VEEKGKKRDYAEADEESKTLVPIDE 502
Query: 543 MESK--------PVVTVDK-IGDL---TPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGL 590
+ K P + V K I D+ TP++DF+AM+S + D V + I
Sbjct: 503 LVQKNKFAKIQHPSIAVQKGILDITINTPVEDFKAMISHTES-DLVSEVI---------- 551
Query: 591 LENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFST----FFDFL 646
E L +RK E+E K FN +L ++ C+ + ++ F++ L
Sbjct: 552 --------------ECLQVMRKTAAEEEESKAFNALLHQLKNWCKLYDKTSPRREFWELL 597
Query: 647 MSKKLSLISKSEAVDSDI 664
+S+I+K + D+D+
Sbjct: 598 KDNDVSIITKQDTNDADV 615
>gi|380023984|ref|XP_003695789.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent DNA helicase 2
subunit KU80-like, partial [Apis florea]
Length = 676
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 149/566 (26%), Positives = 252/566 (44%), Gaps = 91/566 (16%)
Query: 6 EALLLLLDVSPSMHSVLPDVEKLCSRLIQ-KKLIYGK-NHEVGVILFGTEETENELTKEV 63
E+L+LLL+V + P+VE S + K +I+ K EV +IL G+ T+N
Sbjct: 9 ESLVLLLNVGITN----PNVENNSSLFEKAKHIIFLKPKDEVAIILMGSSITKNNF---- 60
Query: 64 GGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDYMLIKKYGETYKGKKHLCLITDALCP 123
+++++ D +V + V+ +L Q T KY + +AL
Sbjct: 61 -NFKYIEEFTDFQVPNWDFVKKCMNL-QST---------KYCYNW---------VEALYA 100
Query: 124 LKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSS 183
V I + ++ +R I++ + + E ++ E + ++N
Sbjct: 101 -----------AVEFIKQNVIDNSIR--KIILMSDFNEETNIISKFEANLIIN------G 141
Query: 184 AKTLFVDSTTSLRGARKTRDISPVTIF--RGDLELSEKMKIKVWVYKKTGEEKFPTLKKY 241
+F D+ +SL+ +T V +F DL+L +K KI + Y K EKFPT KK
Sbjct: 142 QHIIFDDAISSLKFYEETS----VKLFPTYYDLQLFDK-KIPIVSYVKIDIEKFPTWKK- 195
Query: 242 SDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFK 301
A K + +D + S ++ IKGY+YG +P+ + + +K
Sbjct: 196 ---AKGNQKLQSKTEYLDGQRNSYTK-------DEIIKGYKYGGTFIPVEKELEDKMSYK 245
Query: 302 P-EKSVKLLGFTDASNI-LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVR 359
KS K+ GFTD +NI L ++Y ++ + + T +L +AM E N VAIVR
Sbjct: 246 SGMKSYKIYGFTDKNNIDLEYFYKSATHVILPSSETNNVTKPFYSLVQAMHETNSVAIVR 305
Query: 360 CVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNV---LPFAEDVREFQFPSFSKFPVSWQP 416
V+R +V + I+IPD + + L FAED R + S + Q
Sbjct: 306 KVFRNNSTPRMVALFPC-----IDIPDEPWCLIEIELAFAEDRRLME--SRPMKSIIKQL 358
Query: 417 NEQQQEAADNLVK--ML-DLAPSGK---GEILQPELTPNPALERFYHHLELKSEHQDAAP 470
+ +Q EA DNL+ ML D+ S + + P PNPA++ +H L ++ + D
Sbjct: 359 SNEQNEAVDNLINSVMLNDIQDSYEVDGNQYFLPGCVPNPAIQHRWHILSYRAINPDKPL 418
Query: 471 PPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNG 530
PP+++ LKKI E P + S+S I F + EN LK + ++E D+ +
Sbjct: 419 PPMENYLKKILEA-PLIKERSKSHIQKIAQLFRL-ENIDLKAEEKSDIKEDNMQIDDNSD 476
Query: 531 --DGSVSDAQAV--NSMESKPVVTVD 552
D + D + NS + ++++D
Sbjct: 477 TKDNKIEDKVDIENNSYKEDSILSLD 502
>gi|320588005|gb|EFX00480.1| ku family DNA-binding protein [Grosmannia clavigera kw1407]
Length = 734
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 160/705 (22%), Positives = 292/705 (41%), Gaps = 85/705 (12%)
Query: 41 KNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSL--KHLPQGTCAGDY 98
K VGV+ T+ET N L E GYE++ VLQ+++ + +++L + P T GD
Sbjct: 49 KTWTVGVLGLRTDETRNPLQGE-DGYENIAVLQEVEPMSLTSLRALGSRIQPSSTKTGDA 107
Query: 99 ---------MLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLR 149
M+ K + K + + L+TD L P+ D Q++ + Q++ G+
Sbjct: 108 VSAIIVATDMISKAAPKRLKFNRKIVLVTDGLGPIDGDDFDDLAFQLNELDIQLIVVGVD 167
Query: 150 MKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARK--TRDISPV 207
+ +P ++ I N+NLL +K S +++F +++ + + P
Sbjct: 168 FDDAEFGFKEENKPPLK--IYNENLLQSLVEKCS-RSVFGTMAEAIKEMDRPNVKPYRPY 224
Query: 208 TIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKF-------ATHEVKVD- 259
+ G L L + + + E+F L K + P+T AT +D
Sbjct: 225 KTYDGPLTLGNPESYESALSIEV--ERF-FLTKVARPPPATTVVVNTEADGATQSTPIDP 281
Query: 260 --------YEYKSVEDPS--KVVPP-----------EQRIKGYRYGPQVVPISSAEWEAV 298
++ V++ V+ P ++ KGY YG V IS +
Sbjct: 282 MGGIEIGGSDFSKVQNTRVYSVIDPRAPGGKLEVDFDELEKGYEYGRTAVHISETDRNIT 341
Query: 299 KFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIV 358
+ K K + ++GF N M + + + + + VA SAL AM E A+
Sbjct: 342 QLKTLKGLSIVGFISQDNYEPFLNMGESCIILPRKFSEQDEVAFSALIHAMIETKTYAVA 401
Query: 359 RCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVS----- 413
R V + ++ ++ +L P V+E I FY LPFAEDVR + FP K +
Sbjct: 402 RFVAKDMKEPQLL-LLFPTVAENIV---CFYDVPLPFAEDVRTYPFPPLDKVITATGSVL 457
Query: 414 ----WQPNEQQQEAADNLVKMLDLAPSGKGEILQP----ELTPN--PALERFYHHLELKS 463
P+++ +A + V +D++ G + QP +L N P + R L ++
Sbjct: 458 SKHRLLPDDKLNQAMSDYVDAMDISMFGTDDEGQPAEYVDLADNYSPIIYRVNKALAFRA 517
Query: 464 EHQDAAPPPLDDS-LKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKK--STRRFLRE 520
H D +D+ + + P L+ +++S I++ +K+ P K ++R
Sbjct: 518 VHPDEPFVQVDNEFVTRFDHPPQELVRQAKSQIESLIKVADVKKVPPKAKGRASRNAAAN 577
Query: 521 KP-SGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKA 579
KP SG D G+ + A++ + KI I +F+ ++ +
Sbjct: 578 KPLSGLDVDALLGTPAAAKSGKAT---------KISKENAIPEFKQALAGTVDVKQISDL 628
Query: 580 IEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNF 639
M + L+ +S I+Y + E + +R+ I +EP +N +
Sbjct: 629 TAQMGEVVRSLITSSTGDIHYARVAENMRVMREELISLEEPALYNQFTTDLKAQLVAEEL 688
Query: 640 ST----FFDFLMSKKLSLISKSEAVDSDITDDEAGSFIVKSQPKH 680
+ + + L LI+KSE+ +SD+TD+ A F+ + +PK
Sbjct: 689 GGPRLEMWWTIRTSGLGLITKSESDESDVTDEAAREFVRQFKPKE 733
>gi|296814992|ref|XP_002847833.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
gi|238840858|gb|EEQ30520.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
Length = 721
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 157/737 (21%), Positives = 309/737 (41%), Gaps = 92/737 (12%)
Query: 5 REALLLLLDVSPSMHSV-----LPDVE----KLCSRLIQKKLIYGKNHEVGVILFGTEET 55
+EA + ++DV SM + L D++ + ++ K +GVI T+ T
Sbjct: 4 KEATVYIVDVGKSMGEINNGRELSDLDWAMLYVWDKITTTVATGRKTATIGVIGMRTDGT 63
Query: 56 ENELTKEV--GGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCA--GDYM-LIKKYGETYKG 110
+++ + YEH+ + +DI ++ L+ L + + GD + LI KY + K
Sbjct: 64 SSDIWSKSKDDAYEHISIFKDIGQALMPDLRELRSLIKASSTDKGDAIDLIVKYCKKLKY 123
Query: 111 KKHLCLITDALCPLKDPD-VGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVII 169
K+ + L+T+ + DPD + +++ ++V G+ + E V
Sbjct: 124 KRKIVLVTNGKGAM-DPDGMEGIASKINEEGIELVVLGVDFDD--PEYGFKEEDKDAVKA 180
Query: 170 ENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSE------KMKIK 223
EN++ L ++ S + + + + F+GD L + + I+
Sbjct: 181 ENESSLQKLCDVCDGIYGTLEQAISELDTPRVKIVRGIPSFKGDFRLGDPEKYDSALTIQ 240
Query: 224 VWVYKKTGEEKFP----------------------TLKKYSDKAPSTDKFATHEVKVDYE 261
V Y +T + P TLK + + +++ V+
Sbjct: 241 VERYYRTYAARPPAASSFVLSGAPPEGQESGKPSVTLKNVNAEGENSNTIGLTSVRNARS 300
Query: 262 YKSVEDP----SKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI 317
Y+ +D + V ++ KGY YG V IS ++ K + + +++++GF N
Sbjct: 301 YQVADDSVVGGKRDVERDELAKGYEYGRTAVHISESDENITKIETKAALEIIGFIPTQNY 360
Query: 318 LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPN 377
R+ M N+ IA+ N++A +A+S++ A+ E+ A+ R V + G+ ++ +L P+
Sbjct: 361 DRYMIMSTSNVIIAQRTNNKAIMALSSVIHALFELESYAVGRLVVKDGKGPALI-LLAPS 419
Query: 378 VSEKINIPD--SFYFNVLPFAEDVREFQFPSFSKF-PVSWQ--------PNEQQQEAADN 426
+ PD LPFAED R ++FP + VS + PNE A +
Sbjct: 420 IE-----PDYECLLEVQLPFAEDCRCYRFPPLDRVTTVSGKAVKEHRNLPNEDLVSAMEQ 474
Query: 427 LVKMLDLAPSGKG----EILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITE 482
V ++L G+G E E +P L R + ++ H PP+ + L+K++
Sbjct: 475 YVASMELVEPGEGGELVESFALEDCYSPLLHRIDQAIRWRAIHPTKPLPPVPEILQKLSR 534
Query: 483 PDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNS 542
TL +S+ A++ IK+ P K R++ D+P S D +A+
Sbjct: 535 QPETLREQSRPALEQLIKVSDIKKVPPKAKG-----RKRNRDVDKPL---SGLDVEALLQ 586
Query: 543 MESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPK 602
E + +I I +F+ ++ + + + +++ M I +++S +Y +
Sbjct: 587 GEKR-----QRISPENAIPEFKQALANTEDINTIKDSVKQMCTIIEDQIKHSLGDSSYDR 641
Query: 603 AVELLVALRKGCILEQEPKQFNDVLEKVC------KICRKRNFSTFFDFLMSKKLSLISK 656
A+E + +R I +EP +ND + ++ K+ R + + K+ L+
Sbjct: 642 AIEYMGTMRDELISFEEPDLYNDFIRRLKQKLLGDKLGEDRR--ELWWLIRKNKIGLVDN 699
Query: 657 SEAVDSDITDDEAGSFI 673
S +T+ EA F+
Sbjct: 700 KLVEISKVTEQEAKEFM 716
>gi|119194859|ref|XP_001248033.1| hypothetical protein CIMG_01804 [Coccidioides immitis RS]
gi|121927188|sp|Q1E6K9.1|KU80_COCIM RecName: Full=ATP-dependent DNA helicase II subunit 2; AltName:
Full=ATP-dependent DNA helicase II subunit Ku80
Length = 731
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 154/697 (22%), Positives = 283/697 (40%), Gaps = 85/697 (12%)
Query: 41 KNHEVGVILFGTEETENELTK--EVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAG 96
K VGV+ T+ + N L + E Y H+ V Q+I + ++ L+ L P T G
Sbjct: 49 KTATVGVVGLRTDGSSNPLWEKDEEESYAHLSVFQEIGQMLMPDIRKLRDLVKPSNTNQG 108
Query: 97 DYM--------LIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGL 148
D + +I +Y + K K+ + L+TD + + + ++ ++V G+
Sbjct: 109 DAISSIILAIDMIVRYCKRLKYKRKIVLVTDGRSTMDSDGIDSIVSKIKEEGIELVILGV 168
Query: 149 RMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVT 208
+ E +N+++L I + + + + + + +
Sbjct: 169 DFDD--PDYGFKEEDKDPFKTKNESVLKILADDADGAYGTLAQAVEEMTTPRIKVVRGIP 226
Query: 209 IFRGDLEL------SEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYE- 261
FRGDL L S + I+V Y +T + P ++ +T E V +
Sbjct: 227 SFRGDLRLGDPSQYSTGLTIQVERYYRTYVARPPAASAFALSIAPPKGQSTAESSVTLQN 286
Query: 262 ----------------------YKSVEDPS----KVVPPEQRIKGYRYGPQVVPISSAEW 295
Y+ +++ + K V + KGY YG V IS ++
Sbjct: 287 GDSTVETANASNNLSGVRNARSYQVIDENAPGGKKEVERDDLAKGYEYGRTAVHISESDE 346
Query: 296 EAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKV 355
K +++ +GF + N R+ M N+ IA+ N +A +A+S++ A+ E+
Sbjct: 347 VITKLDTTAALEFIGFIQSENYERYMNMSTSNVIIAQKINDKAILALSSMIHALFELEYY 406
Query: 356 AIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKF-PVSW 414
AI R V + G+ ++V +L P + + LPFAED R ++FP K VS
Sbjct: 407 AIGRLVTKDGKPPLMV-LLAPLIETDF---ECLLEVQLPFAEDTRSYRFPPLDKIVTVSG 462
Query: 415 Q--------PNEQQQEAADNLVKMLDLAPSGKG----EILQPELTPNPALERFYHHLELK 462
+ P++ E V+ +DL+ + + L E +P + R + +
Sbjct: 463 KVVKEHRNLPSDDLLETMGKYVEDMDLSEFDENGDPFQSLALEDCYSPLVHRIDQAIRWR 522
Query: 463 SEHQDAAPPPLDDSLKKITEPDPTLLAESQSAI-DAFCGQFVIKENPKLKKSTRRFLREK 521
+ H PP+ L+K++ L+ +S ++ D V K PK K RR +K
Sbjct: 523 AVHPTKPLPPVPKVLEKLSHWPEELVKKSHDSLRDLISISAVKKVPPKAKGRKRRREADK 582
Query: 522 P-SGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAI 580
P SG N D + + + KI PI +F+ ++ + + A+
Sbjct: 583 PLSGL---NVDDLLRGEKRL------------KISPENPIPEFKQTLANTEDISAISDAV 627
Query: 581 EDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVL----EKVCKICRK 636
+ M I + S INY +A+E + +R+ I +EP +ND + EK+
Sbjct: 628 KQMSAIIEDQIRQSLGDINYDRAIEGIGTMREELIAYEEPGLYNDFIRGLKEKLLDDKLG 687
Query: 637 RNFSTFFDFLMSKKLSLISKSEAVDSDITDDEAGSFI 673
+ + + +L LI + SDIT+++A F+
Sbjct: 688 GDRREMWWLIRKSRLGLIDQKALDISDITEEQAREFL 724
>gi|395326369|gb|EJF58779.1| SPOC domain-like protein [Dichomitus squalens LYAD-421 SS1]
Length = 840
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 176/777 (22%), Positives = 299/777 (38%), Gaps = 156/777 (20%)
Query: 26 EKLC--SRLIQKKLIYGKNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLV 83
E +C RL+ + K + GVILFG+EET N + GGYEHV I + +
Sbjct: 47 EMVCPTRRLVTQIFNGRKTDKCGVILFGSEETNNMINDANGGYEHVAEYIPIAQPNSATL 106
Query: 84 QSLKHLPQGTCAGD----YMLIKKYGETYKGKK-----HLCLITDALCPLKDPDVGTKED 134
L L T +GD ++ + + Y G K + ++TD P++ ED
Sbjct: 107 AKLAALEPSTVSGDPIDALIVAIETQDQYLGNKKTWTRKVVILTDGESPIE------VED 160
Query: 135 QVSTIARQMVAFGLRMKNIVVRASLSGEPHM-----RVIIENDNLLNIFSKKSSAKTL-- 187
+T+ +M A + + + V P + +N+ F+ K A +
Sbjct: 161 WEATV-NKMNALDISLTVVGVDFDDDDLPFHEEDKSNIKQKNEAFYRTFTSKLHAGVVGN 219
Query: 188 --FVDSTTSLRGARKTRDISPVTIFR-GDLEL--SEKMKIKVWVYKKTGEEKFPTLKKYS 242
+ S R+ + T+ R GD ++ E ++I V K T + + K++
Sbjct: 220 CDYALQEISRPDVRQVKSTLMGTVLRIGDTQVRPEEAIEISVKTSKCTALARPKSWKRFG 279
Query: 243 DKAP------------------STDKFATHEVKVDY-----------EYKSVEDPSKVVP 273
+ P T F ++ Y E K +D +V
Sbjct: 280 RRKPLAAGKDKEKHKDAMDEDEQTMTFVQLRMRTAYYLEQNKGSKAEEKKEKDDLKNLVK 339
Query: 274 --PEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIA 331
E+ ++GY+YG +P++ + + K + + GF N R M +V A
Sbjct: 340 VQKEELVRGYKYGATFLPVADGGYP--RLHTRKGIDICGFFQKKNFRRELEMGEVYYVWA 397
Query: 332 EPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN----IPDS 387
+P N VA+S++ +AM E +AI R V + +GVL P+V E+++ +
Sbjct: 398 DPANPMQQVALSSIVQAMYEKGVMAIARWV-SKDDMDPKMGVLYPSVFEEVDCLLWVQVC 456
Query: 388 FYFNVLPFAEDVREFQFPSFSKF---------PVSWQPNEQQQEAADNLVKMLDLAPSGK 438
N +PFA+D+R F F S + P +Q +A + V +DL+ +G+
Sbjct: 457 GSLNAMPFADDIRNFPFASLETLINKKGEVVTEHPYLPTNEQMDAMEQFVDAMDLSDAGE 516
Query: 439 GE-------ILQPELTPNPALERFYHHLELKSEHQD---AAPPPLDDSLKKITEPDPTLL 488
+ L+ NPA+ R L + QD PP L K +P +L
Sbjct: 517 KDEEGNREPWFDTRLSYNPAIHRTKQALFHSAIVQDLNTHPLPPPHPELLKYMDPPRRVL 576
Query: 489 AESQSAIDAFCGQFVIKENPKLKKSTRR--------------FLREKP---SGSDEPNGD 531
+++AI+ ++E PK R+ L +KP S S + N +
Sbjct: 577 KRARTAIEECKKTLKVREVPKKVARVRKDEHVRAPDEDEDMLLLDQKPARGSPSSKKNTE 636
Query: 532 -----GSVSDAQAVNSMESKPVVTVDK--------------------------------- 553
GS + Q S K +D
Sbjct: 637 ARSQYGSQTQTQTSPSRTQKKAAAMDVGSSETEEEAEELLLDKQTPARKPDRDRGPLPTP 696
Query: 554 -------IGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVEL 606
IG P++DF+ +SR D V KA+ED+ I +L Y + +E
Sbjct: 697 ARMPGRIIGLSFPLEDFKKNISRGDV---VTKAVEDLAWVIQEILTRPFSTRRYDELIEC 753
Query: 607 LVALRKGCILEQEPKQFNDVLEKVCKICRKR--NFSTFFDFL--MSKKLSLISKSEA 659
+ LRK + E E + +N ++ + + C ++ F+D + + + LS IS EA
Sbjct: 754 MQELRKVSLEEDEIEAWNTFIQDLRETCLEKEPGNKAFWDKVRQVGRPLSFISSPEA 810
>gi|327356138|gb|EGE84995.1| Ku80 [Ajellomyces dermatitidis ATCC 18188]
Length = 741
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 157/694 (22%), Positives = 292/694 (42%), Gaps = 87/694 (12%)
Query: 41 KNHEVGVILFGTEETENELTK--EVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAG 96
K +GVI T++T N L + E Y ++ V Q I + ++ L+ L P T G
Sbjct: 49 KTATLGVIGLKTDDTNNPLWEKDEEESYANLSVFQGISQILMSQIRDLRGLIKPSHTTEG 108
Query: 97 DYM--------LIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQ---MVA 145
D + +I +Y + K K+ + L+TD + D+ E+ VS I + +V
Sbjct: 109 DAISSLILAIDMIVRYCKKLKYKRKIVLVTDGTGAM---DIDGIEEIVSKINEENIELVI 165
Query: 146 FGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDIS 205
G+ + E + +N+N L + ++ S +T+ +
Sbjct: 166 LGVDFDD--PEYGFKEEDKDPLKAKNENHLKQLVEDCEGIYGTLEHAISEMEIPRTKVVR 223
Query: 206 PVTIFRGDLEL------SEKMKIKVWVYKKTGEEKFPTLKKY------SDKAPSTDKFAT 253
+ F+GDL L S + I+V Y +T + P + S+ +T AT
Sbjct: 224 SMPTFKGDLRLGDPEQYSSALSIQVERYYRTYAARPPAASSFVSSAVLSEGQETTQSSAT 283
Query: 254 HEVK--------VDYEYKSVEDP-------------SKVVPPEQRIKGYRYGPQVVPISS 292
K V SV + + V ++ KGY YG V I+
Sbjct: 284 LAAKESSQEGGAVASALTSVRNARTYQVNDEEAAGGKRDVERDELAKGYEYGRTAVHITE 343
Query: 293 AEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEM 352
++ K + + +++ +GF + R+ M N+ IA+ N++A +A+S++ A+ E+
Sbjct: 344 SDENITKLETDAALEFIGFIPSDKYDRYMNMSTSNIIIAQKTNNKAILALSSIIHALFEL 403
Query: 353 NKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK-FP 411
A+ R V + G+ +VV +L P++ + LPFAEDVR ++FP K
Sbjct: 404 ECCAVGRLVPKAGKAPLVV-LLAPSIEADY---ECLLEVQLPFAEDVRSYRFPPLDKVIT 459
Query: 412 VSWQPNEQQQEAADN--LVKMLDLAPSGK-------GEILQP---ELTPNPALERFYHHL 459
VS + + + +N L +M D S + GE ++ E + +P L R +
Sbjct: 460 VSGKTVTEHRNLPNNNLLSRMADYVDSLELTEKDEDGETVESMSIEDSFSPLLHRIDQAI 519
Query: 460 ELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLR 519
++ H PP+ + L+K++ L A+S+ + +K+ P K R
Sbjct: 520 RWRAVHPSEPLPPVPEILQKLSHQPEDLQAQSKDTLAKLIAASDVKKVPPKAKG-----R 574
Query: 520 EKPSGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKA 579
++ +D+P +S ++++ V KI I +F+ ++ V A
Sbjct: 575 KRDRDTDKP-----LSGLNVEELLQTEKRV---KISANNAIPEFKQLLVSSQDLGAVKDA 626
Query: 580 IEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLE----KVCKICR 635
++ M I + +S NY +AVE L +++ + +EP +ND + K+
Sbjct: 627 VKQMSAIIESQIRHSLGDANYDRAVEGLGTMKEELVAFEEPALYNDFIRGLKVKLLGNDL 686
Query: 636 KRNFSTFFDFLMSKKLSLISKSEAVDSDITDDEA 669
+ + ++ +L LI K + SD+T++EA
Sbjct: 687 GGDRREMWWYIRKNRLGLIDKKLSELSDVTEEEA 720
>gi|444708075|gb|ELW49194.1| X-ray repair cross-complementing protein 5 [Tupaia chinensis]
Length = 652
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 163/700 (23%), Positives = 289/700 (41%), Gaps = 109/700 (15%)
Query: 12 LDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETENELTKEVG 64
+DV SM + P E K+ + +Q+++ E+ ++LFGT+ T N L E
Sbjct: 1 MDVGFSMSNSFPGEESAFEQAKKVMTMFLQRQVFAESKDEIALVLFGTDGTNNTLADE-D 59
Query: 65 GYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDY-----MLIKKYGETYKGKKHLCLIT 118
Y+++ V + + + D L++ ++ Q G+ D+ M+ K+ G +G L +
Sbjct: 60 QYQNITVHRHLMLPDFDLLEDVESKIQPGSQQSDFLDALIMIDKEDGTGDRGDGKL--RS 117
Query: 119 DALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIF 178
D P P G E Q + QMV KN+++ SL G+ D L I+
Sbjct: 118 DHHGP-SFPQKGLTEQQKEGV--QMV------KNLMM--SLEGK---------DGLDEIY 157
Query: 179 SKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPT- 237
S S + L V + R+ P + L + + IK+ YK +P
Sbjct: 158 SFSESLRQLCV-------FKKIQRNSVP---WPCQLTIGSNLAIKIVAYKSRNSVPWPCQ 207
Query: 238 LKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEA 297
L S+ A +K+ YKS+ + GYRYG +VP S + E
Sbjct: 208 LTIGSNLA----------IKI-VAYKSMLFSCSL--------GYRYGSDIVPFSKVDEEQ 248
Query: 298 VKFKPE-KSVKLLGFTDAS----------NILRHYYMKD----VNLF--------IAEPG 334
+K+K E K +LGF +S I++ + +D +NLF A
Sbjct: 249 MKYKSEGKCFSVLGFCKSSEVPINLFTGYQIVKVFAARDDEVPINLFTGYQIVKVFAARD 308
Query: 335 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLP 394
+ A VA S+L A+ E++ VAI+R + + + VG+ P++ + + + LP
Sbjct: 309 DEPAAVAFSSLVHALDELDMVAIIRYAY-HNKSNPQVGMAFPHIKDTY---ECLMYVQLP 364
Query: 395 FAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPEL-----TPN 449
F ED+R++ F SF + P E Q A D L+ + L + E +L PN
Sbjct: 365 FMEDLRQYMFSSFRN-SKKYIPTEAQLSAVDALIDSMSLVKKNEEEDTVEDLFLTTKIPN 423
Query: 450 PALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPK 509
P +R + L ++ H PP+ + + +P + A+ Q ++ F + E K
Sbjct: 424 PQFQRLFQCLLYRAFHPQEPLPPIPQHIVTMLDPPAEVTAKCQDSLSKIKTLFPLTEAVK 483
Query: 510 LKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSR 569
K + + D D M G+ Q + ++
Sbjct: 484 TKDQVT---------AQDIFQDKKYFDKWLGERMSLWAWWLASASGEREAPQHHRSRIAD 534
Query: 570 RDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEK 629
+ + A + I L ++NE + K+++ + A R+ I E + FN L+
Sbjct: 535 EERSEAGGGASRQLIAHIEQFL-DTNETPYFMKSMDCIKAFREEAIQFSEEQCFNSFLKG 593
Query: 630 VCKICRKRNFSTFFDFLMSKKLSLISKSEAVDSDITDDEA 669
+ + + + F++ ++ ++LI+K EA S +T +EA
Sbjct: 594 LREKVDVKQLNHFWEIVVQDGITLITKDEASGSSVTAEEA 633
>gi|171686704|ref|XP_001908293.1| hypothetical protein [Podospora anserina S mat+]
gi|170943313|emb|CAP68966.1| unnamed protein product [Podospora anserina S mat+]
Length = 731
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 156/705 (22%), Positives = 293/705 (41%), Gaps = 109/705 (15%)
Query: 41 KNHEVGVILFGTEETENELTKE--VGGYEHVKVLQDIKVVDGHLVQSLKH--LPQGTCAG 96
K +G + F T+ETENEL + + GY+++ VLQ I + ++ L+ P +
Sbjct: 49 KTWTIGFVGFNTDETENELADKDKLEGYDNISVLQPIGPMSMTELRELRSKVQPSRSYGA 108
Query: 97 D--------YMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGL 148
D +++KY +K K+ + L+T+ + D ++ D ++ + +
Sbjct: 109 DPVSAAVVALKMLEKYNPKHKIKRRVILVTNGESNIDDEEL----DHIAAVFNE-----F 159
Query: 149 RMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGAR--------- 199
+++ IV+ + E D N + + + + L + G
Sbjct: 160 KVELIVIGIDFDDADYG--FKEEDKSTNKKNNEKALQQLVEKCNDGVFGTMQQAVDELSI 217
Query: 200 -KTRDISPVTIFRGDLELSE------KMKIKVWVYKKTGEEKFPTL-------------- 238
+ + + P + G L L + + V Y KT P+
Sbjct: 218 PRIKPVRPFKAYDGPLTLGDPDKYPSAISFHVERYYKTKRASAPSASTVVVSNNNGFSQS 277
Query: 239 KKYSDKAPSTDKFATH--EVKVDYEYKSVEDPS-----KVVPPEQRIKGYRYGPQVVPIS 291
+ Y D+ ++ VK YK V DP + V E+ KGY+YG VVP
Sbjct: 278 QTYKDEDGDSEMGGAEFSGVKQMRTYK-VNDPDAPGGKRDVDFEELAKGYQYGRTVVPFG 336
Query: 292 SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKE 351
++ K+ +KS ++GF + M + L + + N A + +SA A+ E
Sbjct: 337 ESDLSITKYSTKKSFTIIGFVPFDSYNPFINMGETGLIVPQKMNEEAELGLSAFIHALYE 396
Query: 352 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSF---YFNVLPFAEDVREFQFPSFS 408
+ A+ R V ++ + +V + +L PN + D F Y LPFAED+R +QFP
Sbjct: 397 ADSYAVARYV-QKDEAAVQILLLKPNTG----LEDEFECLYDVPLPFAEDIRSYQFPPLD 451
Query: 409 K-FPVSWQ--------PNEQQQEAADNLVKMLDLAPSGKGEILQP-ELTP-----NPALE 453
K VS + PN+ ++A + V +DL+ E +P + P NP +
Sbjct: 452 KVLTVSGRVLKEHRLLPNDDLKDAVSDFVDAMDLSKYDVDEDGKPVDYAPVDEVYNPIIH 511
Query: 454 RFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKS 513
R + ++ D + L + ++P LL +++ I +K+ P +K+
Sbjct: 512 RMNQAIRARAVDPDLPIGQPAEILLRYSKPPKKLLEKAKHEIGNLIDAAELKKVP--EKA 569
Query: 514 TRRFLRE---KP-SGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSR 569
RF ++ KP SG D + G A++S + P +F+ M++
Sbjct: 570 KGRFGKKDAVKPLSGLDIDSLLGGQPKRAAISSENAIP--------------EFKQMLAA 615
Query: 570 RDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEK 629
+ + ++KA++ M + L+++S + Y +A E L +R+ + + P +N +L
Sbjct: 616 AEDDETIEKAVKQMGEIVRKLIKDSFADVFYSRAAENLGVMREELLGFEMPMLYNKLLRA 675
Query: 630 VCKICRKRNFS-----TFFDFLMSKKLSLISKSEAVDSDITDDEA 669
+ K ++ ++ L LI+K E SD+T++EA
Sbjct: 676 LKKSLLSGELDGDRREMWYKHIVGGGLGLITKEELDVSDVTEEEA 720
>gi|303310907|ref|XP_003065465.1| Ku70/Ku80 beta-barrel domain containing protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240105127|gb|EER23320.1| Ku70/Ku80 beta-barrel domain containing protein [Coccidioides
posadasii C735 delta SOWgp]
Length = 739
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 154/669 (23%), Positives = 270/669 (40%), Gaps = 90/669 (13%)
Query: 66 YEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDYMLIKKYGETYKGKKHLCLITDALCP 123
Y H+ V Q+I + ++ L+ L P T GD M+++ Y + K K+ + L+TD
Sbjct: 93 YAHLSVFQEIGQMLMPDIRKLRDLVKPSNTNQGDDMIVR-YCKRLKYKRKIVLVTDGRST 151
Query: 124 LKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVR-----ASLSGEPHMRVIIENDNLLNIF 178
T D + +I ++ G+ + + V E +N+++L I
Sbjct: 152 -------TDSDGIDSIVSKIKEEGIELVILGVDFDDPDYGFKEEDKDPFKTKNESVLKIL 204
Query: 179 SKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLEL------SEKMKIKVWVYKKTGE 232
+ + + + + + + FRGDL L S + I+V Y +T
Sbjct: 205 ADDADGAYGTLAQAVEEMTTPRIKVVRGIPSFRGDLRLGDPSQYSTGLTIQVERYYRTYV 264
Query: 233 EKFPTLKKY--SDKAPSTDKFATHEVKVDYEYKSVEDPS--------------------- 269
+ P + S P A V + +VE S
Sbjct: 265 ARPPAASAFALSIAPPKGQSTAESSVTLQNGDSTVETASASNNLSGVRNARSYQVIDENA 324
Query: 270 ----KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKD 325
K V + KGY YG V IS ++ K +++ +GF + N R+ M
Sbjct: 325 PGGKKEVERDDLAKGYEYGRTAVHISESDEVITKLDTTAALEFIGFIQSENYERYMNMST 384
Query: 326 VNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIP 385
N+ IA+ N +A +A+S++ A+ E+ AI R V + G+ ++V +L P + P
Sbjct: 385 SNVIIAQKINDKAILALSSMIHALFELEYYAIGRLVTKDGKPPLMV-LLAPLIE-----P 438
Query: 386 D--SFYFNVLPFAEDVREFQFPSFSKF-PVSWQ--------PNEQQQEAADNLVKMLDLA 434
D LPFAED R ++FP K VS + P++ E V+ +DL+
Sbjct: 439 DFECLLEVQLPFAEDTRSYRFPPLDKIVTVSGKVVKEHRNLPSDDLLETMGKYVENMDLS 498
Query: 435 PSGKG----EILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAE 490
+ + L E +P + R + ++ H PP+ L+K++ L+ +
Sbjct: 499 EFDENGDPFQSLALEDCYSPLVHRIDQAIRWRAVHPTKPLPPVPKVLEKLSHWPEELVKK 558
Query: 491 SQSAI-DAFCGQFVIKENPKLKKSTRRFLREKP-SGSDEPNGDGSVSDAQAVNSMESKPV 548
S ++ D V K PK K RR +KP SG N D + + +
Sbjct: 559 SHDSLRDLISISAVKKVPPKAKGRKRRREADKPLSGL---NVDDLLRGEKRL-------- 607
Query: 549 VTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLV 608
KI PI +F+ ++ + + A++ M I + S INY +A+E +
Sbjct: 608 ----KISPENPIPEFKQTLANTEDISAISDAVKQMSAIIEDQIRQSLGDINYDRAIEGIG 663
Query: 609 ALRKGCILEQEPKQFNDVL----EKVCKICRKRNFSTFFDFLMSKKLSLISKSEAVDSDI 664
+R+ I +EP +ND + EK+ + + + +L LI + SDI
Sbjct: 664 TMREELIAYEEPGLYNDFIRGLKEKLLDDKLGGDRREMWWLIRKSRLGLIDQKALDISDI 723
Query: 665 TDDEAGSFI 673
T+++A F+
Sbjct: 724 TEEQAREFL 732
>gi|345566887|gb|EGX49827.1| hypothetical protein AOL_s00076g711 [Arthrobotrys oligospora ATCC
24927]
Length = 698
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 143/666 (21%), Positives = 270/666 (40%), Gaps = 60/666 (9%)
Query: 41 KNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDY 98
K + V+ F T+ ++N L + Y ++ +L + ++ L L P T GD
Sbjct: 49 KTDTIAVVGFRTDGSDNSLFQNDENYSNISILSPMSQFLMPQIRELNKLLEPSATDRGDG 108
Query: 99 M--------LIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRM 150
+ +I+KY + K +++ +T+ + +Q++ + G+
Sbjct: 109 VSALVVALDMIEKYCKKLKYIRNIVFLTNGTGNFDFDGINDIIEQITEQKINLTILGVDF 168
Query: 151 KNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIF 210
++ + + + EN+ L + + +T+ PV F
Sbjct: 169 DDLEFGVAEKDKSLDKA--ENERALRELCDQCDGMYGTIAEAIEEIQRPRTKKTRPVHSF 226
Query: 211 RGDLELSEK-------MKIKVWVYKKTGEEKFPTLKKYSDKAPS-TDKFATHEVKV---- 258
RG L + + + I V + +T K PT ++ PS D + K+
Sbjct: 227 RGQLSIGNESTNPRSTLLIDVERFPRTMVAKPPTASSFA--VPSERDSVGGNLHKIRNTR 284
Query: 259 DYEYKSVEDPSKVVPPEQR--IKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASN 316
++ + P K + EQ KGY YG +VPIS + E VKF E S+K++GF S
Sbjct: 285 TFQVGDEDAPGKAIDIEQEDMAKGYLYGRTIVPISVEDQEIVKFDTEASLKIVGFIPKSG 344
Query: 317 ILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVG---V 373
R + + N+ +A N A +A+S+ A+ E++ + I R V + + V++ +
Sbjct: 345 FERPICLSNSNIIVASKANDEAIMALSSFIHALYELDSLVIGRLVTKDDKPPVMIAMAPI 404
Query: 374 LTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQ---------PNEQQQEAA 424
+ P+ + + LPFAED R+++F + + P ++ QEA
Sbjct: 405 IEPSFECLVEVQ-------LPFAEDARQYKFAPLNTVRTTAGKVLDKHRLIPTQELQEAM 457
Query: 425 DNLVKMLDLAP-SGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEP 483
D+ V +DL G + L P P H ++ + AP + I E
Sbjct: 458 DDYVDSMDLMNLEGLNDPLLPFAQPEDIFSPLLHRIQQVIRARAIAP-----NSDGIPEV 512
Query: 484 DPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNSM 543
P LL S + G ++ +LK++ L + + D +S +
Sbjct: 513 SPILLNYSTIHL----GLDPEEDLDRLKQAADVCLVPAKAKGKKIGRDKPLSGLDVGRLL 568
Query: 544 ESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKA 603
E + +I PI +F M++ + + ++ M + I ++ S ++Y +A
Sbjct: 569 EER--TKSKRIDKNNPIPEFRQMIASAQQREDIQLLVQQMGDIIKDIIRYSIADLHYSRA 626
Query: 604 VELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKKLSLISKSEAVDSD 663
+E L ALR+ CI E +F D + K + + F+ + KL L+ +E + S
Sbjct: 627 IECLRALREDCI-TLEAFEFYDSFIRELKSFTEADRKDFWSRVRKDKLGLVLPTEDIRSK 685
Query: 664 ITDDEA 669
T +E+
Sbjct: 686 TTIEES 691
>gi|46401620|dbj|BAD16623.1| MUS52 [Neurospora crassa]
Length = 661
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 116/486 (23%), Positives = 204/486 (41%), Gaps = 57/486 (11%)
Query: 65 GYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDYM--------LIKKYGETYKGKKHL 114
GYE++ VLQ++ + +++LK P T + D + +I+ + + K K+ +
Sbjct: 74 GYENISVLQELGPMTMASLRALKSKIEPSSTSSADAISAIVVALRMIQTFTKKLKYKRKI 133
Query: 115 CLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNL 174
++T+ P+ D + ++ + +++ G+ + E R +N+ +
Sbjct: 134 IVVTNGESPIDDDQSEEVANMLNDVGIELIVLGVDFDD--AEYGFKEEDKPRHKEQNEKI 191
Query: 175 LNIFSK--KSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMK------IKVWV 226
L +S A + L R + + P + G L L + K I+V
Sbjct: 192 LKTLVDHCESGAFGTMAQAVEELATPR-IKSVRPFKAYDGPLTLGDPQKYPSALSIQVER 250
Query: 227 YKKTGEEKFPTLKKYSD--KAPSTDKF-----------ATHEVKVDYEYKSVEDPS---- 269
Y KT P+ ++ P T + VK Y+ +ED
Sbjct: 251 YFKTKRATPPSASNVANPNGPPQTQVWNEDDGVPFSGVGLQPVKQLRTYR-IEDSKAAGG 309
Query: 270 -KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNL 328
K V E K Y+YG VVP +E + +K++ KS ++GF S+ M + L
Sbjct: 310 KKDVDMEDLAKAYQYGRTVVPFGKSEEDYLKYETTKSFTIIGFVPMSSYEPFLNMGETGL 369
Query: 329 FIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSF 388
+A+ N A + +SAL A+ E+ A+ R V + ++ +L PN + + +I +
Sbjct: 370 IVAQKVNEEAELGLSALIHALHELESYAVARYVNKDKAPPQIL-LLKPNPAIEDDI-ECL 427
Query: 389 YFNVLPFAEDVREFQFPSFSKFPV---------SWQPNEQQQEAADNLVKMLDLAPSGKG 439
Y LPFAEDVR +QFP K PN Q+A + V +DL G+
Sbjct: 428 YDIPLPFAEDVRSYQFPPLDKVLTITGNVLTEHRLLPNNDLQQAMSDYVDAMDLTEYGQD 487
Query: 440 EILQP-ELTP-----NPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQS 493
+ P E P NP + + ++ + DA PP+ + L + T P LLA++++
Sbjct: 488 DDGHPAEYAPIDDLYNPVIHHMNQAIRNRAVNPDAPLPPVAEILTRFTHPPEPLLAKAKT 547
Query: 494 AIDAFC 499
ID
Sbjct: 548 EIDGLI 553
>gi|225684065|gb|EEH22349.1| ATP-dependent DNA helicase II [Paracoccidioides brasiliensis Pb03]
Length = 722
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 163/743 (21%), Positives = 312/743 (41%), Gaps = 101/743 (13%)
Query: 5 REALLLLLDVSPSMHSV-----LPDVEKLCSRLIQKKLIYG-----KNHEVGVILFGTEE 54
+EA + ++DV SM + + D+E R + K+ K +GVI T+
Sbjct: 4 KEATVYIVDVGKSMANCHHGRSISDLE-WAMRYVWDKITTTVATGRKTANLGVIGLKTDR 62
Query: 55 TENEL--TKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ--GTCAGDYM--------LIK 102
++N L +E Y ++ V QDI ++ ++ L+ + T GD + LI
Sbjct: 63 SDNPLWEKEEEKSYANLTVFQDISQINMPQIRELRKAIKISNTTEGDAISSLILAIDLIV 122
Query: 103 KYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQ---MVAFGLRMKNIVVRASL 159
+Y + K K+ + L+TD + D E VS I + +V G+ +
Sbjct: 123 RYCKKLKYKRKIVLVTDGTGAM---DTDGMEGIVSKINEESIELVVLGVDFDD--PEYGF 177
Query: 160 SGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLEL--- 216
E + EN+ L + ++ S +T+ + + F+GDL L
Sbjct: 178 KEEDKDPLKAENEKHLKQLVEDCEGSYGTLEHAISEMEIPRTKVVRSMPTFKGDLRLGNP 237
Query: 217 ---SEKMKIKVWVYKKTGEEKFPTLKKY------SDKAPSTDKFAT------------HE 255
S + I V Y +T + P + S+ +T AT
Sbjct: 238 EKYSSALTILVERYYRTYAARPPAASSFVPSSVLSESHQTTRSSATLGGESGTGAASLTS 297
Query: 256 VKVDYEY----KSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGF 311
V+ Y K + + ++ KGY YG V I+ ++ K + + +++ +GF
Sbjct: 298 VRNARTYQVDDKEAAGGKRDLERDELAKGYEYGRTAVHITESDENITKLETDAALEFIGF 357
Query: 312 TDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVV 371
+ N R+ M N+ IA+ N++A +A+S++ A+ E+ A+ R V + G+ +VV
Sbjct: 358 IASDNYERYMNMSTSNIIIAQKTNNKAILALSSIIHALFELECYAVARLVSKAGKAPLVV 417
Query: 372 GVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK-FPVSWQPNEQQQ--------- 421
+L P++ + LPFAEDVR ++FP + VS + + +
Sbjct: 418 -LLAPSIEPNY---ECLLELQLPFAEDVRPYRFPPLDEVVTVSGKTVTEHRNLPSVNLLS 473
Query: 422 EAADNLVKMLDLAPSGKGEILQP---ELTPNPALERFYHHLELKSEHQDAAPPPLDDSLK 478
AD + KM GEI++ E + +P L R + ++ H PP+ + L+
Sbjct: 474 RMADYVDKMELTEKDEDGEIVESLSIENSFSPLLHRIDQAIRWRAVHPSDPLPPVPEVLQ 533
Query: 479 KITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFL-REKPSGSDEPNGDGSVSDA 537
+++ L A+S+ ++ +K+ P K +R EKP
Sbjct: 534 RLSRQPEELQAQSKKELNKLVEASDVKKVPPKAKGRKRVRDTEKP--------------- 578
Query: 538 QAVNSMESKPVVTVDKIGDLTP---IQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENS 594
++ + + ++ +K ++P I +F+ ++ D V A++ M I +++S
Sbjct: 579 --LSGLNVEELLRTEKRVRISPDNSIPEFKQSLANSQNLDTVKDAVKQMSTIIENQIKHS 636
Query: 595 NEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKV-CKICRKR---NFSTFFDFLMSKK 650
NY +AVE L +++ + +EP +ND + + K+ + + + +
Sbjct: 637 LGDANYDRAVEGLGTMKEELVSFEEPGLYNDFIRSLKAKLLGGELGGDRREMWWHVRKNR 696
Query: 651 LSLISKSEAVDSDITDDEAGSFI 673
L LI K+ + S++T +EA +F+
Sbjct: 697 LGLIDKNLSEVSEVTVEEARNFL 719
>gi|402086941|gb|EJT81839.1| hypothetical protein GGTG_01813 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 727
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 176/747 (23%), Positives = 298/747 (39%), Gaps = 107/747 (14%)
Query: 5 REALLLLLDVSPSMHS-----VLPDVE--------KLCSRLIQKKLIYGKNHEVGVILFG 51
+E + ++D+ SM V PD++ KLC+ + + K +VGV+
Sbjct: 4 KEVTVFIIDLGQSMGDCNGGRVEPDLDWSMRYVWDKLCTIVAASR----KTWQVGVVGLR 59
Query: 52 TEETENELTK-EVGGYEHVKVLQDIKVVDGHLVQSLKHL-----PQGTCAGDYM------ 99
T++T N K GYE++ VLQ + + + SLK L P T +GD +
Sbjct: 60 TDDTNNIHHKGHEDGYENISVLQPVGPMS---MTSLKELRGQIAPSNTNSGDAISAIVVA 116
Query: 100 --LIKKYG-ETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVR 156
LI + K K+ + L+TD P+ + + +++ + ++ G+ +
Sbjct: 117 IDLIDNAAPQRLKYKRKIVLVTDGQGPMDEDSLEDIWARINQLNIELTVVGVDFDD--AD 174
Query: 157 ASLSGEPHMRVIIENDNLLNIFSK--KSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDL 214
E RV N+ LL + K + ++ L+ R + P F G L
Sbjct: 175 YGSKEEDKTRVKTTNEKLLRTLTGNCKDAVFGTMAEAVEELQNPR-IKTTRPYKTFDGQL 233
Query: 215 EL-------SEKMKIKVWVYKKT-----------------GEEKFPTLKKYSDKAPSTDK 250
L S + I+V Y KT + T++ D + D
Sbjct: 234 TLGDPKAYGSSALSIRVERYFKTKAAHAVSASTVVVKSEDATQSTRTVRGEEDDSVPADG 293
Query: 251 FATH-EVKVDYEYKSVEDPS--KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVK 307
T + +Y+ K P + V E KGY YG V IS +E K + K
Sbjct: 294 MLTGLQTARNYQIKDESAPGGKRDVKFEGLAKGYEYGRTAVHISESEHNITKLETTKEFT 353
Query: 308 LLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQ 367
++GF M + + +A + + VA+SAL A+ + A+ R V + G+
Sbjct: 354 IIGFIPKEKFEPFLSMGEACVTLAAKFSEKDEVALSALINALYDTESYAVARLVTKDGKD 413
Query: 368 SVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK-FPVSWQ--------PNE 418
+V +L P + + Y LPFAED+R +QFP K +S Q P++
Sbjct: 414 PQLV-LLMPESDVEF---ECLYDVPLPFAEDLRHYQFPPLDKVVTLSGQTMTTHRLLPSD 469
Query: 419 QQQEAADNLVKMLDLAPSGKGEILQP-ELTP-----NPALERFYHHLELKSEHQDAAPPP 472
++A + V +DL+ G+ +P E P +P + R + + H D P
Sbjct: 470 ALEQAMSDYVDAMDLSSYNTGDDDEPSEYAPIDETFSPMIHRVNQAIRQRVVHPDKPIQP 529
Query: 473 LDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKP-SGSDEPNGD 531
L + + P L+ E+ I +K+ P K R+ KP SG D
Sbjct: 530 ATGILTRYSMPPEKLVDEAADQIKELIRIADVKKVPPKVKGKRQRETVKPMSGLD----- 584
Query: 532 GSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLL 591
DA K KI + +F+ M++ D ++ A M I L+
Sbjct: 585 ---VDALLGKEGPKKRA----KITAENSVPEFKQMLAVADEVSTIEDAARQMGVIIRDLI 637
Query: 592 ENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCK------ICRKRNFSTFFDF 645
+NS NY +A E + +R + +EP+ +ND + + K +C R + +
Sbjct: 638 QNSMGDANYDRATENMRVMRDELVGLEEPELYNDFVRSLKKMIATGDLCGDRR--EMWWY 695
Query: 646 LMSKKLSLISKSEAVDSDITDDEAGSF 672
+ KL L+S E+ S +T++EA F
Sbjct: 696 IKLGKLGLVSTKESEVSTVTEEEALEF 722
>gi|164428817|ref|XP_956387.2| hypothetical protein NCU00077 [Neurospora crassa OR74A]
gi|157072293|gb|EAA27151.2| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 670
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 116/486 (23%), Positives = 204/486 (41%), Gaps = 57/486 (11%)
Query: 65 GYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDYM--------LIKKYGETYKGKKHL 114
GYE++ VLQ++ + +++LK P T + D + +I+ + + K K+ +
Sbjct: 74 GYENISVLQELGPMTMASLRALKSKIEPSSTSSADAISAIVVALRMIQTFTKKLKYKRKI 133
Query: 115 CLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNL 174
++T+ P+ D + ++ + +++ G+ + E R +N+ +
Sbjct: 134 IVVTNGESPIDDDQSEEVANMLNDVGIELIVLGVDFDD--AEYGFKEEDKPRHKEQNEKI 191
Query: 175 LNIFSK--KSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMK------IKVWV 226
L +S A + L R + + P + G L L + K I+V
Sbjct: 192 LKTLVDHCESGAFGTMAQAVEELATPR-IKSVRPFKAYDGPLTLGDPQKYPSALSIQVER 250
Query: 227 YKKTGEEKFPTLKKYSD--KAPSTDKF-----------ATHEVKVDYEYKSVEDPS---- 269
Y KT P+ ++ P T + VK Y+ +ED
Sbjct: 251 YFKTKRATPPSASNVANPNGPPQTQVWNEDDGVPFSGVGLQPVKQLRTYR-IEDSKAAGG 309
Query: 270 -KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNL 328
K V E K Y+YG VVP +E + +K++ KS ++GF S+ M + L
Sbjct: 310 KKDVDMEDLAKAYQYGRTVVPFGKSEEDYLKYETTKSFTIIGFVPMSSYEPFLNMGETGL 369
Query: 329 FIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSF 388
+A+ N A + +SAL A+ E+ A+ R V + ++ +L PN + + +I +
Sbjct: 370 IVAQKVNEEAELGLSALIHALHELESYAVARYVNKDKAPPQIL-LLKPNPAIEDDI-ECL 427
Query: 389 YFNVLPFAEDVREFQFPSFSKFPV---------SWQPNEQQQEAADNLVKMLDLAPSGKG 439
Y LPFAEDVR +QFP K PN Q+A + V +DL G+
Sbjct: 428 YDIPLPFAEDVRSYQFPPLDKVLTITGNVLTEHRLLPNNDLQQAMSDYVDAMDLTEYGQD 487
Query: 440 EILQP-ELTP-----NPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQS 493
+ P E P NP + + ++ + DA PP+ + L + T P LLA++++
Sbjct: 488 DDGHPAEYAPIDDLYNPVIHHMNQAIRNRAVNPDAPLPPVAEILTRFTHPPEPLLAKAKT 547
Query: 494 AIDAFC 499
ID
Sbjct: 548 EIDGLI 553
>gi|330917637|ref|XP_003297893.1| hypothetical protein PTT_08449 [Pyrenophora teres f. teres 0-1]
gi|311329194|gb|EFQ94024.1| hypothetical protein PTT_08449 [Pyrenophora teres f. teres 0-1]
Length = 733
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 156/686 (22%), Positives = 283/686 (41%), Gaps = 101/686 (14%)
Query: 62 EVGGYEHVKVLQDIKVVDGHLVQSLKHL-----PQGTCAGDYM--------LIKKYGETY 108
E GYE+++V ++K +L+ +++L P T GD + +I+ +
Sbjct: 71 ESEGYENIRVFSELK---QYLLSDIRNLQEQLKPSSTDDGDLLSALVVAIHMIENATKGA 127
Query: 109 KGK-----KHLCLITDALCPLKDPDVGTKEDQVSTIAR--QMVAFGLRMKNIVVRASLSG 161
KG + + ++TD + D+ ++ A ++V GL + V
Sbjct: 128 KGNPLKYDRRIIIVTDGRGQMVTDDLEELAAKIKDPAAPIEIVLLGLDFDDADV--GFKE 185
Query: 162 EPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSE--- 218
E R I+N+ +L F + + + ++ PV +RG L L +
Sbjct: 186 EGKERQKIQNEEILKSFVDDCDGSFGTLATAIDQLHVPRLKETRPVHNYRGSLTLGDPQN 245
Query: 219 ---KMKIKVWVYKKTGEEKFPTLKKY---------------------SDKAPSTDKFATH 254
+ I V Y T K PT + D P+TD A H
Sbjct: 246 YEATITIDVERYPCTMLAKPPTASSFIVRSEVKDESGQSRQSSATMTDDNPPTTDLSAIH 305
Query: 255 EVKVDYEYKSVEDP-SKV-VPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFT 312
+V Y+ + P SK+ V E+ +GY YG V IS ++ VK + ++S +L+GF
Sbjct: 306 NSRV-YQVDDRDQPGSKITVEMEELERGYEYGRTAVHISESDMNVVKLETQQSFELVGFV 364
Query: 313 DASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVG 372
A R+ + N + + N A + +S+ A+ E + AI R V + + V++
Sbjct: 365 KAEEFERYLPLSRANFIVPQKANQPAQLGLSSFIHALYEADCYAIARLVAKDLKPPVLL- 423
Query: 373 VLTPNVSEKINIPDSFYFNV-LPFAEDVREFQFPSFS-KFPVSWQ--------PNEQQQE 422
+ +I + +V LPF ED+R ++FP K VS + P +
Sbjct: 424 ----LLVPRIELEWEALVDVELPFEEDMRRYKFPPLDRKLTVSGKTITEHKDLPTDDLLG 479
Query: 423 AADNLVKMLDLAPSGKG------EILQPELTPNPALERFYHHLELKSEHQDAAPPPLD-- 474
A V +DL+ G+ E +PE T +P + R H ++ ++ H + P D
Sbjct: 480 AMSEYVDAMDLSTFGRDEDGNEEEYAKPEDTFSPLVHRINHVIQWRATHPEPGLPIPDPP 539
Query: 475 DSLKKITEPDPTLLAESQSAIDAFCGQFVIKENP---KLKKSTRRFLREKP-SGSDEPNG 530
+ L K + P LLA ++ ++ +K+ P K + +R R+KP SG D
Sbjct: 540 EILLKYSVPPAALLASTEKHLETLKKAADVKKVPPKVKGRGQRQRTERDKPLSGLD---- 595
Query: 531 DGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGL 590
V+ + KP + +L P F+ + D + + +A + M +I L
Sbjct: 596 ---------VDELLGKPKHVKIEANNLIP--SFKQALDVSDSIEAIQEAADGMAKEIRSL 644
Query: 591 LENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCK-ICRKR---NFSTFFDFL 646
+ NS Y +A+E + +R+ +EP+ +N ++++ + I + N + +
Sbjct: 645 ISNSVGDSAYARALEAIRVMREEFTSLEEPEIYNIFVKQLKQDILGSKLNGNRRDMWWKI 704
Query: 647 MSKKLSLISKSEAVDSDITDDEAGSF 672
+ LI + S +T+DEA F
Sbjct: 705 KGNRYGLIDTKRSFVSSVTEDEARRF 730
>gi|440636757|gb|ELR06676.1| hypothetical protein GMDG_00293 [Geomyces destructans 20631-21]
Length = 724
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 150/700 (21%), Positives = 293/700 (41%), Gaps = 95/700 (13%)
Query: 37 LIYGKNH-EVGVILFGTEETENELTKEVGGYEHVKVLQD---IKVVD-GHLVQSLKHLPQ 91
+I G+ VG++ F T+ET N L E GY ++ ++Q IKV D L +S+K P
Sbjct: 44 MITGRTTLTVGIVGFRTDETNNALEGE-EGYNNISIMQPLGPIKVPDLKKLQKSVK--PS 100
Query: 92 GTCAGDYM--------LIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQM 143
+ GD + +++++ + K + + L+T+ + D+ +++ ++
Sbjct: 101 KSDVGDAVSAIIIAIDMMERFTKKLKYARKIVLVTNGTGLMDSDDLDETSSKLNEDGIEL 160
Query: 144 VAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGAR--KT 201
V G+ ++ E + N+ +L + K K++F + +++ +
Sbjct: 161 VVLGVDFDDL--EFGFKEEDKDSLKAGNEKVLRSLADKCE-KSIFGTAAEAVQDLSIPRV 217
Query: 202 RDISPVTIFRGDLELSE------KMKIKVWVYKKTGEEKFPTLKKY-------------- 241
+D P F+G L L + M I + Y +T K P+ Y
Sbjct: 218 KDYRPYATFKGQLTLGDPEKYDTAMCIDIERYFRTKVAKPPSASSYVVAEMAGDNEGDVK 277
Query: 242 -SDKAPSTDKFATHEVKVDYEYKSVEDPS----KVVPPEQRIKGYRYGPQVVPISSAEWE 296
D + D + VK YK V++ + + V + +G+ YG V I+ ++
Sbjct: 278 MEDISAQGDALTS--VKNARTYKIVDESAPGGKRDVDRDDLAQGFEYGRTAVAIAESDQN 335
Query: 297 AVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVA 356
K + S ++GF A R++ M + + +A N +A +A+S+L ++ E+ A
Sbjct: 336 ITKLETVASFSIVGFIPAERYERYFNMGESCVTVAARSNEKARLALSSLVHSLAELESYA 395
Query: 357 IVRCVWRQGQQSVVVGV---LTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK-FPV 412
+ R V + G+ +V + + P++ I++P LPFAEDVR ++FP + +
Sbjct: 396 VARIVLKDGKDPQLVLLSPSIEPDLESLIDVP-------LPFAEDVRLYRFPPLDRVITL 448
Query: 413 SWQ--------PNEQQQEAADNLVKMLDLAPSGKG------EILQPELTPNPALERFYHH 458
S Q P + A V +D++ GK E + E T +P L R
Sbjct: 449 SGQTMTKHRNLPTDDLTRAMSAYVDAMDISTFGKDDEGNPVEYMAIEDTYSPVLHRINQA 508
Query: 459 LELKSEHQD--AAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRR 516
+ ++ D PPP + L K ++P L+ S + ++A +K+ P K R
Sbjct: 509 IRRRAVQPDEPVQPPP--EVLMKYSKPPADLVKASATELEALIKAADVKKVPPKAKGRRA 566
Query: 517 FLREKPSGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWV 576
KP S + A+ S E + + D I +++ + + +
Sbjct: 567 KEAIKPL---------SGLNVDALLSREERSEINSD-----NAIPEYKQRLGTAEDITTI 612
Query: 577 DKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRK 636
+ A ++M I L+E+S Y +A+ L +R + P+ +N + ++ + K
Sbjct: 613 ESASKEMDGIIRSLVEHSLGDSGYGQAIANLGVMRDELASLEMPEVYNSFIRRLKEDLLK 672
Query: 637 RNFST----FFDFLMSKKLSLISKSEAVDSDITDDEAGSF 672
+ + +L L+ K + S ++++EA F
Sbjct: 673 EKLGGDRRELWWEIKKARLGLVDKRKTEVSTVSEEEATEF 712
>gi|307203853|gb|EFN82789.1| ATP-dependent DNA helicase 2 subunit 2 [Harpegnathos saltator]
Length = 832
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 122/535 (22%), Positives = 236/535 (44%), Gaps = 45/535 (8%)
Query: 5 REALLLLLDVSPSMH-----SVLPDVEK-LCSRLIQKKLIYGKNHEVGVILFGTEETENE 58
+E+L+ L+++ + H S L D EK + +IQKK+ EVG++L G++ +EN+
Sbjct: 13 QESLIFLINIGVTRHGTQSNSSLLDKEKFILKHIIQKKIFLHPKDEVGIVLMGSDSSEND 72
Query: 59 LTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDYMLIKKYGETYKGKKHLCLIT 118
V G ++++ L +++ + +L++S+ L + +M Y KH CL
Sbjct: 73 ---SVTGMDNIRELSNMQFGNWNLIESIDKLQNTKQSSSWMEGIYAAVEYI--KHECLDN 127
Query: 119 DALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDN----- 173
+ D +ED VS + L +NI + A G+ + I E+
Sbjct: 128 SERKIMLLSDFNEEEDIVSQFEVDDIIKTLNSENIFLIAI--GKRQLNNIDEDSYTSSEA 185
Query: 174 -LLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGE 232
L + K + + F + + +R +++ + +R D+EL + + K E
Sbjct: 186 LLKKVLEKGNGQYSTFEHAMSEVRFYKQSS--TKPKPWRCDMELGDFCIPIAGISKVMNE 243
Query: 233 EKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIK-GYRYGPQVVPIS 291
P +KK A +T T + + D +++ ++ + GY YG + + +S
Sbjct: 244 PMLPKMKKI---AKTTAADLTEKETLIKNIPQWTDKDRIIHTKEDMSYGYMYGSKPIFVS 300
Query: 292 S-AEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMK 350
E + EK K+ GFT N+ Y++ D ++ P + + +L +AM
Sbjct: 301 DDCEQSMIPKTSEKCYKIHGFTARENVPMEYWLSD-GTYVIIPADESVSAPFYSLVKAMV 359
Query: 351 EMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKF 410
E N VAI+ V+R+ ++ + L P+V + N P LPF D + + ++
Sbjct: 360 EKNVVAIIEKVYRKNTEANMAA-LFPSVDDP-NEPWCLIEIGLPFERD-----YGAIAQH 412
Query: 411 PVSW---QPNEQQQEAADNLVKMLDLAPSGK------GEILQPELTPNPALERFYHHLEL 461
P+ + Q +++Q A D+L+ L+L G+ P PNP +R + L
Sbjct: 413 PLKFMMKQLSQEQSNAVDDLLTSLELPEDADEDSTVDGDKYLPGCMPNPGAQRMWDVLAA 472
Query: 462 KSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRR 516
++ H D PP+ + +K + E ++ + A + F +++ K+ T+R
Sbjct: 473 RALHPDQPLPPITEDVKNLLEQPESVRENGKLACEKIKNLFSLEK--KISSRTKR 525
>gi|383851774|ref|XP_003701406.1| PREDICTED: X-ray repair cross-complementing protein 5-like
[Megachile rotundata]
Length = 705
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 130/503 (25%), Positives = 219/503 (43%), Gaps = 69/503 (13%)
Query: 5 REALLLLLDV---SPSMH---SVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENE 58
+E+L+L++++ SP S+L + + R I+K + EV +I+ G+ T+N
Sbjct: 7 KESLMLIINIGVTSPGKSNDSSLLEKAKDIAKRKIEKMIFLRPKDEVAIIVMGSSNTKNS 66
Query: 59 LTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGT--CAGDYMLIKKYGETYK------G 110
L EH++ D +V + L++ L +L +GT C+ ++ E K
Sbjct: 67 LNA-----EHIEEFADFQVPNWDLIRKLVNL-KGTNYCSNWVEALQAAVEFMKENICDAS 120
Query: 111 KKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIE 170
K + LI+ D +ED +S + G SL + I
Sbjct: 121 MKRIILIS---------DFNEEEDIISQFEAVFLFRG--------EESLDERSESSLKIS 163
Query: 171 NDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKT 230
L ++ K S F D+ +SLR + T F LEL +K KI V Y K
Sbjct: 164 EQLLKDLHKKISGQHITFDDAISSLRFYTEMPKKPSPTYFT--LELVDK-KIPVVSYVKV 220
Query: 231 GEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPI 290
K P+ ++ D + KV+ + + V+ ++ + GY+YG P+
Sbjct: 221 DTGKLPSWRRAKD-----------DQKVETKTQYVDRQRTTYTKDEIVPGYKYGGTFFPV 269
Query: 291 SSAEWEAVKFKP-EKSVKLLGFTDASNI-LRHYYMKDVNLFIAEPGNSRATVAVSALARA 348
+ E + +K KS K+ FT+ NI L + Y + ++ + T +L +A
Sbjct: 270 EKEQEEKMSYKSGPKSYKIHCFTNRDNINLEYLYGNNTHIILPSNKVKETTKTFYSLVQA 329
Query: 349 MKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNV---LPFAEDVREFQFP 405
M + N VAIVR V+R+ +V VL P I+IPD + V L FAED R +
Sbjct: 330 MHKTNSVAIVRKVYRENLAPKMV-VLFPC----IDIPDEPWCLVEIILTFAEDRRVMETR 384
Query: 406 SFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKG------EILQPELTPNPALERFYHHL 459
V Q + +Q EA DNL+ L L+ +G + P P+PA++ +H L
Sbjct: 385 PIKS--VVKQLSSEQNEAIDNLIDSLMLSDTGDSCELDERQYFLPGCVPDPAVQHRWHML 442
Query: 460 ELKSEHQDAAPPPLDDSLKKITE 482
++ + + P +++ LK+I E
Sbjct: 443 SYRAVNPNKPLPSMENYLKEILE 465
>gi|392862723|gb|EAS36611.2| ATP-dependent DNA helicase II subunit 2 [Coccidioides immitis RS]
Length = 742
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 154/702 (21%), Positives = 282/702 (40%), Gaps = 90/702 (12%)
Query: 41 KNHEVGVILFGTEETENELTK--EVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAG 96
K VGV+ T+ + N L + E Y H+ V Q+I + ++ L+ L P T G
Sbjct: 55 KTATVGVVGLRTDGSSNPLWEKDEEESYAHLSVFQEIGQMLMPDIRKLRDLVKPSNTNQG 114
Query: 97 DYM-------------LIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQM 143
D +I +Y + K K+ + L+TD + + + ++ ++
Sbjct: 115 DANTYEAISSIILAIDMIVRYCKRLKYKRKIVLVTDGRSTMDSDGIDSIVSKIKEEGIEL 174
Query: 144 VAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRD 203
V G+ + E +N+++L I + + + + +
Sbjct: 175 VILGVDFDD--PDYGFKEEDKDPFKTKNESVLKILADDADGAYGTLAQAVEEMTTPRIKV 232
Query: 204 ISPVTIFRGDLEL------SEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVK 257
+ + FRGDL L S + I+V Y +T + P ++ +T E
Sbjct: 233 VRGIPSFRGDLRLGDPSQYSTGLTIQVERYYRTYVARPPAASAFALSIAPPKGQSTAESS 292
Query: 258 VDYE-----------------------YKSVEDPS----KVVPPEQRIKGYRYGPQVVPI 290
V + Y+ +++ + K V + KGY YG V I
Sbjct: 293 VTLQNGDSTVETANASNNLSGVRNARSYQVIDENAPGGKKEVERDDLAKGYEYGRTAVHI 352
Query: 291 SSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMK 350
S ++ K +++ +GF + N R+ M N+ IA+ N +A +A+S++ A+
Sbjct: 353 SESDEVITKLDTTAALEFIGFIQSENYERYMNMSTSNVIIAQKINDKAILALSSMIHALF 412
Query: 351 EMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKF 410
E+ AI R V + G+ ++V +L P + + LPFAED R ++FP K
Sbjct: 413 ELEYYAIGRLVTKDGKPPLMV-LLAPLIETDF---ECLLEVQLPFAEDTRSYRFPPLDKI 468
Query: 411 -PVSWQ--------PNEQQQEAADNLVKMLDLAPSGKG----EILQPELTPNPALERFYH 457
VS + P++ E V+ +DL+ + + L E +P + R
Sbjct: 469 VTVSGKVVKEHRNLPSDDLLETMGKYVEDMDLSEFDENGDPFQSLALEDCYSPLVHRIDQ 528
Query: 458 HLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAI-DAFCGQFVIKENPKLKKSTRR 516
+ ++ H PP+ L+K++ L+ +S ++ D V K PK K RR
Sbjct: 529 AIRWRAVHPTKPLPPVPKVLEKLSHWPEELVKKSHDSLRDLISISAVKKVPPKAKGRKRR 588
Query: 517 FLREKP-SGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDW 575
+KP SG N D + + + KI PI +F+ ++ +
Sbjct: 589 READKPLSGL---NVDDLLRGEKRL------------KISPENPIPEFKQTLANTEDISA 633
Query: 576 VDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVL----EKVC 631
+ A++ M I + S INY +A+E + +R+ I +EP +ND + EK+
Sbjct: 634 ISDAVKQMSAIIEDQIRQSLGDINYDRAIEGIGTMREELIAYEEPGLYNDFIRGLKEKLL 693
Query: 632 KICRKRNFSTFFDFLMSKKLSLISKSEAVDSDITDDEAGSFI 673
+ + + +L LI + SDIT+++A F+
Sbjct: 694 DDKLGGDRREMWWLIRKSRLGLIDQKALDISDITEEQAREFL 735
>gi|189188602|ref|XP_001930640.1| hypothetical protein PTRG_00307 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187972246|gb|EDU39745.1| hypothetical protein PTRG_00307 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 733
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 151/702 (21%), Positives = 285/702 (40%), Gaps = 104/702 (14%)
Query: 49 LFGTEETENELT---KEVGGYEHVKVLQDIKVVDGHLVQSLKHL-----PQGTCAGDYM- 99
+ G E++L +E GYE+++V ++K +L+ +++L P T GD +
Sbjct: 55 VIGCRTDESDLAGTMEESEGYENIRVFSELK---QYLLGDIRNLQEQLKPSNTNDGDLLS 111
Query: 100 -------LIKKYGETYKGK-----KHLCLITDALCPLKDPDVGTKEDQVSTIAR--QMVA 145
+++ + KG + + ++TD + D+ ++ A ++V
Sbjct: 112 ALVVAIHMVENATKGAKGNPLKYDRRIIIVTDGRGQMVTDDLEELATKIKDPAAPFEIVL 171
Query: 146 FGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDIS 205
GL + V G+ + +N+ +L F + + + ++
Sbjct: 172 LGLDFDDAEVDFKEEGKEPQKA--QNEEILRSFVDDCDGNFGTLATAIDQLHVPRLKETR 229
Query: 206 PVTIFRGDLELSE------KMKIKVWVYKKTGEEKFPTLKKY------------------ 241
PV +RG L L + + I V Y T K PT +
Sbjct: 230 PVHNYRGSLTLGDPQNYEATITIDVERYPCTMLAKPPTASSFIVQGDVKDESGQSGQSSM 289
Query: 242 ---SDKAPSTDKFATHEVKVDYEYKSVEDPSK--VVPPEQRIKGYRYGPQVVPISSAEWE 296
D P+TD A H ++ Y+ + P V E+ +G+ YG V IS ++
Sbjct: 290 TMTGDNPPTTDLSAVHNSRI-YQVDDKDHPGTKTTVEMEELERGFEYGRTAVHISESDMN 348
Query: 297 AVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVA 356
VK + ++S+ L+GF A R+ + N + + N A + +S+ A+ E + A
Sbjct: 349 VVKLETQQSLDLVGFIKAEEFERYLPLSRANFIVPQKANQPAQLGLSSFIHALYEADCYA 408
Query: 357 IVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNV-LPFAEDVREFQFPSFS-KFPVSW 414
I R V + + V++ + +I + +V LPF ED+R ++FP K VS
Sbjct: 409 IARLVAKDLKPPVLL-----LLVPRIELEWEALVDVELPFEEDMRRYKFPPLDRKLTVSG 463
Query: 415 Q--------PNEQQQEAADNLVKMLDLAPSGKG------EILQPELTPNPALERFYHHLE 460
+ P + +A V +DL+ G+ E +PE T +P + R H ++
Sbjct: 464 KTITEHKDLPTDDLLDAMSEYVDAMDLSTFGRDEDGNEEEYAKPEDTFSPLVHRINHVIQ 523
Query: 461 LKSEHQDAAPPPLD--DSLKKITEPDPTLLAESQSAIDAFCGQFVIKENP---KLKKSTR 515
++ H + P D + L K + P LLA ++ ++A +K+ P K + +
Sbjct: 524 WRATHPEPGLPIPDPPEILLKYSVPPAALLASTEKHLEALEKAADVKKVPPKVKGRGKRQ 583
Query: 516 RFLREKP-SGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPD 574
R R+KP SG D V+ + KP + +L P F+ + D +
Sbjct: 584 RAERDKPLSGLD-------------VDELLGKPKRVKIEANNLIP--SFKQALDVCDTVE 628
Query: 575 WVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVL----EKV 630
+ +A + + ++ L+ NS Y +A+E + +R+ +EP+ +N+ + E +
Sbjct: 629 AIQEAADSIAKEVRSLISNSVGDSAYARALEAIRVMREEITSLEEPEIYNEFVKQLKEDI 688
Query: 631 CKICRKRNFSTFFDFLMSKKLSLISKSEAVDSDITDDEAGSF 672
N + + K LI S +T+D+A F
Sbjct: 689 LGGKLNGNRRDMWWKIKGNKYGLIDMKRCYHSSVTEDQARRF 730
>gi|402218793|gb|EJT98868.1| SPOC domain-like protein [Dacryopinax sp. DJM-731 SS1]
Length = 799
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 118/462 (25%), Positives = 192/462 (41%), Gaps = 69/462 (14%)
Query: 272 VPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIA 331
V E+ +K Y+YG VP E+E K + K ++++GF S R + +V+
Sbjct: 345 VEKEELVKAYKYGATWVPCEEGEFE--KLQTTKGMEVIGFVPESKWHREQALGEVSYVYP 402
Query: 332 EPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQ-SVVVGVLTPNVSEKINIPDSFYF 390
+++A + SA+ + M E + VR VWR G V V P S + D F
Sbjct: 403 SDTSAKAQIQFSAIVQVMAEKGVMMTVRYVWRDGADPKVGVCKAQPLGSVEWGGVDCLLF 462
Query: 391 NVLPFAEDVREFQFPSFSKF----------PVSWQPNEQQQEAADNLVKMLDLAPSGKGE 440
+PFA+DVR+++F S + S P ++QQ A D+ V +DL + + E
Sbjct: 463 VQMPFADDVRKYKFNSLTDLFDKKTGERIKEHSTLPTQEQQSAMDDFVDAMDLMDATQDE 522
Query: 441 ------ILQPELTPNPALER----FYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAE 490
P L+ NPAL R +H + ++ PPP + +K T P+ +L
Sbjct: 523 EGNTAPWFDPALSFNPALHRIKQALFHGARVADPEKNPLPPPHPELVKYFTTPE-NVLDR 581
Query: 491 SQSAIDAFCGQFVIKEN-----PKLKKSTRR---------FLREKPS---GSDEPNGD-- 531
++ AI+ IK+ PK S RR +L E G+ GD
Sbjct: 582 AKPAIERLKKAMNIKKGKFSVPPKAAVSKRRNGATADAPEYLYESVEDILGATTGTGDSN 641
Query: 532 ---------GSVSDAQAVNSMESKPVVTVDK---IGDLTPIQDFEAMMSRRDCPDWVDKA 579
G D P V + I TP++DFE ++ + D V KA
Sbjct: 642 SLLAKTSPKGKGKDTNNAQLPTPSPSVAPEPGRLISLRTPLKDFEGLL---EAGDLVSKA 698
Query: 580 IEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNF 639
+EDM LL+ + + + +E + A+R E E + + + K +++F
Sbjct: 699 VEDMSAV---LLQVATDSQRSEEMLECMKAMRDKAKEEDEVDAYQQFMIDLKKEATRKDF 755
Query: 640 ST--FFDFLMSK--KLSLISKSEA----VDSDITDDEAGSFI 673
S + + + K+S I+ EA S + D E+ FI
Sbjct: 756 SNPDLWPLIRRQGVKISWITVKEAEGYGSQSSVNDKESRKFI 797
Score = 39.7 bits (91), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 20/107 (18%)
Query: 9 LLLLDVSPSMHS---------------VLPDVEKLCSRLIQK--KLIYG--KNHEVGVIL 49
+ ++DVSPSM L +E +I+K + I+ K E GVIL
Sbjct: 13 IFVIDVSPSMGEPMFPAEDSGSPEEGYGLTKLEWALEYVIRKIQEFIFTERKTEECGVIL 72
Query: 50 FGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL-PQGTCA 95
FGT+ T N++ E GYE++ L + ++ L+ + P+GT A
Sbjct: 73 FGTDTTNNKVNDEHDGYENIVELVPLSAPTTKIIDMLRTVKPEGTIA 119
>gi|303271277|ref|XP_003055000.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462974|gb|EEH60252.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 604
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 139/350 (39%), Gaps = 54/350 (15%)
Query: 93 TCAGDYMLIKKYGETYKGKKHLCLITD--ALCPLKDPDVGTKEDQVSTIARQMVAFGLRM 150
T A D ++ + G + +H+ +TD C + D + ++ IA M +R+
Sbjct: 31 TVASDMLVRHERGGGFA--RHVLFVTDLRTRCEIDD-------EFIAGIAAGMKGASVRL 81
Query: 151 KNIVVRASLSGEPHMRVIIEND---------------NLLNIFSKKSSAKTLFVDSTTSL 195
VV G+ E D ++LN S ++A +
Sbjct: 82 TVAVV----DGDGDAATTSEADEETKRVNRAMLQGLCDVLNEASGVAAASMSGIQDAVEA 137
Query: 196 RGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHE 255
+T+ P T FRGDLE + + +KVWVYKK E K P++K D S +
Sbjct: 138 LQVAQTKLTKPTTTFRGDLEFTPFVSLKVWVYKKVSEAKPPSMKLRVDDDESGGAHEPNV 197
Query: 256 VKVDYEYKSVEDPSK--VVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTD 313
V + +KS DP VP E I Y YGP +PI V K +K +K+ GFT
Sbjct: 198 VVRERSFKSYADPDNPVSVPSEMMISAYPYGPTNIPIQDDVAALVASKNDKGMKIFGFTP 257
Query: 314 ASNILRHYYMKDVNLFIAEPGNSRATVAVSALARA-------------------MKEMNK 354
+ + M + + + PG ++ A A + M+
Sbjct: 258 LDTVPQWLGMDEARILVPWPGREQSVAAGMAASAGFSPREAGKAAAAMSALARAMERKGV 317
Query: 355 VAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQF 404
A+ R VW Q V G LTP+++ + D F LP++ED+ F
Sbjct: 318 AALTRAVWTQNSDKVNFGALTPHITAEG---DFLLFVPLPYSEDMYSSDF 364
>gi|449550383|gb|EMD41347.1| hypothetical protein CERSUDRAFT_146244 [Ceriporiopsis subvermispora
B]
Length = 830
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 140/589 (23%), Positives = 245/589 (41%), Gaps = 98/589 (16%)
Query: 9 LLLLDVSPSMHSV----LPD--------VE--------KLCSRLIQKKLIYG-KNHEVGV 47
+ L+DVSPSM + +PD VE + +Q+ + +G K + G+
Sbjct: 12 MFLVDVSPSMGKIREVEVPDGANGESMTVEMTNLEYALQFVKLKVQEMIYHGRKTEQCGL 71
Query: 48 ILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDYM-----LIK 102
ILFGT++T+N + ++ GGYEHV I D + + + GD + I+
Sbjct: 72 ILFGTDDTDNTVNEKNGGYEHVSEYIPILQPDVRTLAKISGIEPSETTGDAIDALIVGIE 131
Query: 103 KYGETYKGK----KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRAS 158
E + K + + LITD P++ D +++ + + G+ + +
Sbjct: 132 TQQEYLERKPSWTRKIVLITDGESPIEIEDWEATVSKMNALKISLTVVGVDFDDDELPFH 191
Query: 159 LSGEPHMRVIIENDNLLNIFSKKSSAKTL----FVDSTTSLRGARKTRDISPVTIFR-GD 213
G+ ++ N++ + F+ K + F + ++ + V + R GD
Sbjct: 192 EQGKSDIKRT--NESFYHTFTSKLERGVVGNAEFALQELARPEIKQVKSQPSVFVLRVGD 249
Query: 214 LELSEKMKIKVWV--YKKTGEEKFPTLKKYSDKAPSTD------KFATHEVKV------- 258
+E + I+++V YK T + P++K+++ + D + E KV
Sbjct: 250 VESRAEEAIEIYVKTYKYTAKASLPSIKRFARRVKGDDEDESRMQLDDDEDKVIWTQLAR 309
Query: 259 -----------------DYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFK 301
D E + D + V E+ ++G++YG VP + K
Sbjct: 310 RTEYFIDRGDGEEDSEGDAEDERKGDALEKVEKEELVRGFKYGASYVPCPDDTFP--KLP 367
Query: 302 PEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAM-KEMNKVAIVRC 360
K +++ GF A + R M +V + + VA+S+L +AM K K AI R
Sbjct: 368 TLKGIEICGFFKAKHFKRWQEMGEVYYVFGDTDKAMQQVALSSLVKAMAKSEEKFAIARW 427
Query: 361 VWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVS------- 413
V + G + VGV+ P E D + +PFA+D+R F F S K VS
Sbjct: 428 VKKDGGEP-KVGVMWPMTIE--GQMDYLMWVQMPFADDIRNFPFGSLDKL-VSKTNNTVT 483
Query: 414 ---WQPNEQQQEAADNLVKMLDLAPSG----KGE---ILQPELTPNPALER----FYHHL 459
+ P ++Q+ A D V +DL +G +GE L+ NPAL R H
Sbjct: 484 SHPYLPTKEQESAMDRFVDEMDLMNAGEKNEEGEREPWFDVRLSYNPALHRMKQALLHAA 543
Query: 460 ELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENP 508
+ ++ PPP + L K +P +L ++ AI+ F ++E P
Sbjct: 544 VVDDISKNPLPPPHPE-LTKYFDPPLRVLKRARDAIEECKDLFKVREVP 591
Score = 45.8 bits (107), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 62/128 (48%), Gaps = 11/128 (8%)
Query: 554 IGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKG 613
IG+ P+ DF ++R D V KA+ED+ + I ++ + ++ + LRK
Sbjct: 703 IGNTYPLDDFRQNIARGDV---VTKAVEDLGDIIKEVVAKPFASRRTEEMLQCMRVLRKV 759
Query: 614 CILEQEPKQFNDVLEKVCKIC--RKRNFSTFFDFLM--SKKLSLISKSEAV----DSDIT 665
+ E E +N L ++ ++C K F+ + + +SLISKSEA SD+T
Sbjct: 760 ALEEDEIDAWNAFLRQLHEVCLESKPGNKEFWTHVQGEGRTISLISKSEASKFGGTSDVT 819
Query: 666 DDEAGSFI 673
D A FI
Sbjct: 820 DAYAAEFI 827
>gi|167537231|ref|XP_001750285.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771275|gb|EDQ84944.1| predicted protein [Monosiga brevicollis MX1]
Length = 784
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 179/800 (22%), Positives = 317/800 (39%), Gaps = 174/800 (21%)
Query: 12 LDVSPSMHSVLPDVEKLCSRL----------IQKKLIYGKNHEVGVILFGTEETENELTK 61
LDV +M P + S L I+ +++ HEV ++LFG TE++L
Sbjct: 9 LDVGHAMALPQPKLRGFGSHLEAAVAALSYSIRNRVLLTPKHEVALVLFGAATTEHDLED 68
Query: 62 E---VGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDYMLIKKYGETYKGKKHLCLIT 118
E VG + +LQ + + + + + K + L L T
Sbjct: 69 ESVLVGFAAGLALLQQRQ--------------------EALRSESKTKASKMQMRLHLFT 108
Query: 119 D-ALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHM----RVIIENDN 173
+ + D G+ D S + VA L++++ V LS + + + +
Sbjct: 109 NQTIVSTAGEDDGS--DHASALIN--VAQDLKLESFVYGIQLSDDASLADASKATPSHTT 164
Query: 174 LLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEE 233
L + S+ + F + + L+ RK R + P F +L ++ ++I V Y
Sbjct: 165 LQDFGSRLGAQLYNFGEISDMLKLFRK-RVVKPAA-FNVNLRVA-NVEIPVSGYDIVKRA 221
Query: 234 KFPTLKKYSDKA---PSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPI 290
T KK S++ PS + +V+ + Y ++ + + + R + YRYG ++P
Sbjct: 222 TVSTFKKLSNQVEIDPSDGD--SGKVQREVTYHLDDEMATEIQKDDRQRAYRYGSTLIPW 279
Query: 291 -----SSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKD-VNLFIAEPGNSRA-TVAVS 343
S+ E+ K + EK + L F A++I RH YM D V LFI +PG+ A +A+
Sbjct: 280 PEEAESNPEY---KVEMEKQLTTLYFAPAASIPRHVYMGDSVKLFIPKPGSEPAVAIALD 336
Query: 344 ALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPN-------------------------- 377
AL M++ VAIV V+ + + S +G+L P
Sbjct: 337 ALVAGMEKRRVVAIVAYVYNK-RSSPKLGMLFPRQLVADEDEDEEEEEEDGEDQHEGSDG 395
Query: 378 ------------------VSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQ 419
+ K + +F +LPF ED R F FPS EQ
Sbjct: 396 HGPATGSSLGSSVGASAVLDGKSRRQRALHFVLLPFQEDARHFGFPSLKSLINELHCQEQ 455
Query: 420 Q-------------------QEAADNLVKMLDL-------APSGKG-------------- 439
Q A D V LDL PS
Sbjct: 456 ATPATASTGASNPNDLPDTPQAAMDAFVSALDLMNVPDDQTPSTLCIIKAHVSSAHSCWA 515
Query: 440 ----------EILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLA 489
E L+PE T NPA++ + + + H P +D + K EP P L
Sbjct: 516 WLLDEDGDPVEALEPEDTFNPAIQMYNLAVPHRVLHPGDQLPAIDPEIVKFIEPHPYLAK 575
Query: 490 ESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGS-VSDAQAVNSMESKPV 548
+ + F +K N ++K S +R + G D DGS V DA+ +++ + +
Sbjct: 576 KMAAMTPKLTQLFPLKIN-EVKTSGKRNANDL-FGDD----DGSAVKDAKMLDTNAAANI 629
Query: 549 VT-VDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELL 607
+ V ++G P++D+E ++ ++ + ++ + ++IF ++ +G + K V ++
Sbjct: 630 LAGVTQVGSSRPVEDYEELLQSQNFAN-LEAVSSQLADQIFRFVDLYMDG-DLSKFVAMV 687
Query: 608 VALRK------GCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKKLSLISKSEAVD 661
A+R+ + + D L+ C+ + ++F+T L+ L LI+ E
Sbjct: 688 EAMRRASKDHDATVYNAFLMELKDRLDSQCETGKAQHFTT---ALLQHNLGLITVEETNT 744
Query: 662 SDITDDEAGSFIVKSQPKHE 681
++ D+A SF+ + +P HE
Sbjct: 745 GGVSQDQASSFLSQPEPSHE 764
>gi|361124310|gb|EHK96413.1| putative ATP-dependent DNA helicase II subunit 2 [Glarea lozoyensis
74030]
Length = 679
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 157/682 (23%), Positives = 286/682 (41%), Gaps = 114/682 (16%)
Query: 45 VGVILFGTEETENELTKEVGG-----YEHVKVLQDIKVVDGHLVQSL--KHLPQGTCAGD 97
VGV+ T+E+EN L + G Y+H+ V +++ + + SL K +P T AGD
Sbjct: 54 VGVLGLRTDESENSLYNDDDGPEDESYQHIAVHKELGPITLSDLGSLQEKLVPSQTEAGD 113
Query: 98 YM--------LIKKY-----GETYKGKKHLCLITDALCPLKDPDVGTKEDQVST----IA 140
+ ++ K+ G+ K + + L+TD + + D DQ++ +
Sbjct: 114 AVSAIVVAIEMVNKFTTLGTGKPAKSGRKIVLVTDGQGYIDNTDPNNL-DQIALRCNELG 172
Query: 141 RQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTL--FVDSTTSLRGA 198
+++ G+ ++ E EN+ LL + + + T+ +++ +L G
Sbjct: 173 IELIVLGIDFDDL--DYGFKEEDKSEQKRENEALLKSLTDQCNKGTIATLIEAIDNL-GV 229
Query: 199 RKTRDISPVTIFRGDLELSEKMK-------IKVWVYKKTGEEKFPTLKKYSDKAPSTDKF 251
+ + + P F G L L + K I V Y KT KK S APS F
Sbjct: 230 PEIKSVRPYKAFGGRLALGDYEKYPETALYIDVLRYTKT--------KKAS--APSASSF 279
Query: 252 ATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGF 311
+ KS + V + KGY YG V IS+AE K + ++GF
Sbjct: 280 VNN--------KSAR--KRDVDRDDLAKGYEYGRTAVHISAAEENVTKMDTYEGFSIIGF 329
Query: 312 TDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVV 371
+ + R+ M + + +A+ N +A VA+S+L A+ E++ A+ R V + ++ ++
Sbjct: 330 VPSESFERYLVMGESCMTVAQSVNEKAVVALSSLIHALHELDSYAVARIVLKDMKEPKII 389
Query: 372 ---GVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV 428
V+ P+ ++P LPFAEDVR + P+++ +A ++ V
Sbjct: 390 LLAPVIEPDFEGLADVP-------LPFAEDVR------------IYLPSDELTDAMEDYV 430
Query: 429 KMLDLAPSGKGEILQP------ELTPNPALERFYHHLELKSEHQDA--APPPLDDSLKKI 480
+DL+ GKGE +P E T +P + R + ++ + D PPP + + K
Sbjct: 431 DAMDLSTFGKGEDGEPIEYMTMEETYSPTVHRINAAIRNRAIYPDEPIKPPP--EVVMKW 488
Query: 481 TEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREK--PSGSDEPNGDGSVSDAQ 538
P L+ + S + + + + KK +RF RE+ P + + + Q
Sbjct: 489 ANPPADLITNAASQLKRLQ-KVADVKKVEAKKKGKRFNREQITPLSGLDIDALLDTNTTQ 547
Query: 539 AVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGI 598
A++S S P +F + R + + M I L++ S
Sbjct: 548 AISSENSIP--------------EFRQALGRTTSEAEILSTTKQMGAIIRKLVKESVGEA 593
Query: 599 NYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFST--------FFDFLMSKK 650
+Y +A+E L +R+ + P+ +ND ++ + K + F+ + K
Sbjct: 594 SYARALENLRVMREEMVDLDMPEIYNDFVKALKKALLGGELDSNNGGEGKVFWVDVKRGK 653
Query: 651 LSLISKSEAVDSDITDDEAGSF 672
L LI +S S++T +EA F
Sbjct: 654 LGLIDQSTTDGSNVTAEEASEF 675
>gi|350290744|gb|EGZ71958.1| SPOC domain-like protein [Neurospora tetrasperma FGSC 2509]
Length = 667
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 114/485 (23%), Positives = 203/485 (41%), Gaps = 57/485 (11%)
Query: 65 GYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDYM--------LIKKYGETYKGKKHL 114
GYE++ VL+++ + ++ LK P T + D + +I+ + + K K+ +
Sbjct: 74 GYENISVLKELGPMTMTSLRVLKSKIEPSSTSSADAISAIVVALRMIQTFTKKLKYKRKI 133
Query: 115 CLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNL 174
++T+ P+ D + ++ + +++ G+ + E R +N+ +
Sbjct: 134 IVVTNGESPIDDDQSEEVANMLNDVGIELIVLGVDFDD--AEYGFKEEDKPRHKEQNEKI 191
Query: 175 LNIFSK--KSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMK------IKVWV 226
L +S A + L R + + P + G L L + K I+V
Sbjct: 192 LKTLVDHCESGAFGTMAQAVEELATPR-IKSVRPFKAYDGPLTLGDPQKYPSALSIQVER 250
Query: 227 YKKTGEEKFPTLKKYSD--KAPSTDKF-----------ATHEVKVDYEYKSVEDPS---- 269
Y KT P+ ++ P T + VK Y+ +ED
Sbjct: 251 YFKTKRATPPSASNVANPNGPPQTQVWDEDHGVPFSGVGFQPVKQLRTYR-IEDSKAAGG 309
Query: 270 -KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNL 328
K V E K Y+YG VVP +E + +K++ KS ++GF S+ M + L
Sbjct: 310 KKDVDMEDLAKAYQYGRTVVPFGKSEEDYLKYETTKSFTIIGFVPMSSYEPFLNMGETGL 369
Query: 329 FIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSF 388
+A+ N A + +SAL A+ E+ A+ R V + ++ +L PN + + +I +
Sbjct: 370 IVAQKVNEEAELGLSALIHALHELESYAVARYVNKDKAPPQIL-LLKPNPAIEDDI-ECL 427
Query: 389 YFNVLPFAEDVREFQFPSFSKFPV---------SWQPNEQQQEAADNLVKMLDLAPSGKG 439
Y LPFAEDVR +QFP K PN Q+A + V +DL G+
Sbjct: 428 YDIPLPFAEDVRSYQFPPLDKVLTITGNVLTEHRLLPNNDLQQAMSDYVDAMDLTEYGQD 487
Query: 440 EILQP-ELTP-----NPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQS 493
+ P E P NP + + ++ + DA PP+ + L + T P L+A++++
Sbjct: 488 DDGHPAEYAPVDDLYNPVIHHMNQAIRNRAVNPDAPLPPVAEILTRFTHPPEPLIAKAKT 547
Query: 494 AIDAF 498
ID
Sbjct: 548 EIDGL 552
>gi|170595344|ref|XP_001902342.1| Ku70/Ku80 beta-barrel domain containing protein [Brugia malayi]
gi|158590032|gb|EDP28811.1| Ku70/Ku80 beta-barrel domain containing protein [Brugia malayi]
Length = 565
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 124/516 (24%), Positives = 216/516 (41%), Gaps = 64/516 (12%)
Query: 32 LIQKKLIYGKNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKV-----VDGHLVQSL 86
+I +K+ + ++LFG+E T+N +T + + +V+ +Q K+ +D + S
Sbjct: 50 IITRKIFTESVDKFTLMLFGSEVTQNPITTDENIFFYVEEMQQAKIDWLRFIDKEIKPSK 109
Query: 87 K----HLPQGTCAGDYML--IKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIA 140
L A DYM ++ Y E+ +++ L+T+ L D E+ + TI
Sbjct: 110 STNGDFLSALIAALDYMRNHLENYPESNITVRNILLVTN----LGGFDGNMDEECIETII 165
Query: 141 RQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSS----------AKTLFVD 190
M A + + +P +I ++ + + K S A+ + D
Sbjct: 166 NGMKALEINFNVVGPSFGKLSKPKDEIISTEESAIELEESKLSNTTQSFKMEPAERILTD 225
Query: 191 STTSLRGARKT---------RDISPVTIFRGD---LELSEKMKIKVWVYKKT-------G 231
T G + R + RG LEL K+ + +YKK
Sbjct: 226 ILTQTDGVIYSFAEALPVLQRFVPRKVKVRGQKFYLELGIDFKLPLQMYKKIQPANFKLA 285
Query: 232 EEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVED-----PSKVVPPEQRIKGYRYGPQ 286
+K+ ++ K + + + KVD S + S + EQ IKGY++G
Sbjct: 286 TQKYASITDVQLKRKTVYEKCVKDEKVDDGDGSADSNLSQGSSSKISKEQTIKGYKFGTT 345
Query: 287 VVPISSAEWEAVKFKPE-KSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSR-ATVAVSA 344
+VP + + + +KPE + +KL+ F S IL HY M + P R A +A+SA
Sbjct: 346 IVPYNEEDQKEYGWKPENRCLKLIQFAKRSQILEHYMMDGGACYFIPPALDRSACIAISA 405
Query: 345 LARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQF 404
L AM + VA+ R V+ ++G+ + D F LPF ED R F
Sbjct: 406 LVNAMIAEDSVALTRYVYSAASHPRIMGLFPRRSKRGV---DMFVGIKLPFYEDFRGLDF 462
Query: 405 PSFSKFPVSWQPNEQQQEAADNLVKMLDL------APSGK-GEILQPELTPNPALERFYH 457
P + P + +P +A LV+ +DL + +G+ E L+P PNP L+ +
Sbjct: 463 PQLNS-PTT-EPKSDDLKAMHALVEAMDLTKAHFNSETGQFEESLRPRDVPNPKLQNVCN 520
Query: 458 HLELKSEHQDAAPPPLDDS-LKKITEPDPTLLAESQ 492
++ ++ H + P DD L + EP+ LL ++
Sbjct: 521 AMKYRALHPNIPLPAFDDKLLGGLLEPNAFLLKRAK 556
>gi|384248239|gb|EIE21724.1| hypothetical protein COCSUDRAFT_83513 [Coccomyxa subellipsoidea
C-169]
Length = 224
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 74/114 (64%), Gaps = 2/114 (1%)
Query: 241 YSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKF 300
YS+K+ + D A+H+V + EYK DP VP E+R K Y+YG Q VP+ + + + +
Sbjct: 2 YSEKSRAAD--ASHDVLREQEYKDASDPDATVPAEERAKAYKYGKQYVPVQAEDEAYLAY 59
Query: 301 KPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNK 354
+P++ + L+GF DA ++ + Y+MKD + +AE GN R+ +A+SAL RAM N+
Sbjct: 60 RPDRGISLMGFLDAESVPQQYHMKDPWVMVAEKGNERSGLAMSALVRAMANKNQ 113
>gi|226293459|gb|EEH48879.1| ATP-dependent DNA helicase II [Paracoccidioides brasiliensis Pb18]
Length = 633
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 98/416 (23%), Positives = 193/416 (46%), Gaps = 42/416 (10%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRA 338
KGY YG V I+ ++ K + + +++ +GF + N R+ M N+ IA+ N++A
Sbjct: 236 KGYEYGRTAVHITESDENITKLETDAALEFIGFIASDNYERYMNMSTSNIIIAQKTNNKA 295
Query: 339 TVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAED 398
+A+S++ A+ E+ A+ R V + G+ +VV +L P++ + LPFAED
Sbjct: 296 ILALSSIIHALFELECYAVARLVSKAGKAPLVV-LLAPSIEPNY---ECLLELQLPFAED 351
Query: 399 VREFQFPSFSK-FPVSWQPNEQQQ---------EAADNLVKMLDLAPSGKGEILQP---E 445
VR ++FP + VS + + + AD + KM GEI++ E
Sbjct: 352 VRPYRFPPLDEVVTVSGKTVTEHRNLPSVNLLSRMADYVDKMELTEKDEDGEIVESLSIE 411
Query: 446 LTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIK 505
+ +P L R + ++ H PP+ + L++++ L A+S+ ++ +K
Sbjct: 412 NSFSPLLHRIDQAIRWRAVHPSDPLPPVPEVLQRLSRQPEELQAQSKKELNKLVEASDVK 471
Query: 506 ENPKLKKSTRRFL-REKPSGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTP---IQ 561
+ P K +R EKP ++ + + ++ +K ++P I
Sbjct: 472 KVPPKAKGRKRVRDTEKP-----------------LSGLNVEELLRTEKRVRISPDNSIP 514
Query: 562 DFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPK 621
+F+ ++ D V A++ M I +++S NY +AVE L +++ + +EP
Sbjct: 515 EFKQSLANSQNLDTVKDAVKQMSTIIENQIKHSLGDANYDRAVEGLGTMKEELVSFEEPG 574
Query: 622 QFNDVLEKV-CKICRKR---NFSTFFDFLMSKKLSLISKSEAVDSDITDDEAGSFI 673
+ND + + K+ + + + +L LI K+ + S++T +EAG+F+
Sbjct: 575 LYNDFIRSLKAKLLGGELGGDRREMWWHVRKNRLGLIDKNLSEVSEVTVEEAGNFL 630
>gi|327308720|ref|XP_003239051.1| hypothetical protein TERG_01036 [Trichophyton rubrum CBS 118892]
gi|326459307|gb|EGD84760.1| hypothetical protein TERG_01036 [Trichophyton rubrum CBS 118892]
Length = 737
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 157/752 (20%), Positives = 312/752 (41%), Gaps = 106/752 (14%)
Query: 5 REALLLLLDVSPSMHS-----VLPDVE----KLCSRLIQKKLIYGKNHEVGVILFGTEET 55
+EA + ++DV SM V D++ + R+ K +GV+ T+ T
Sbjct: 4 KEATVYIVDVGRSMGEMNNGRVYSDLDWAMLYVWDRITTTIATGRKTATIGVVGLRTDGT 63
Query: 56 ENELTKEV--GGYEHVKVLQDI---KVVDGHLVQSLKHLPQGTCAGDYM--------LIK 102
+++ + Y+++ + ++I ++ D +QSL P T GD + +I
Sbjct: 64 SSDMWTKSKDNSYKNISIFKEIGQARMPDLRELQSLIK-PSNTDNGDAISSIILAIDMIA 122
Query: 103 KYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGE 162
KY + + K+ + L+T+ P+ + T +++ ++V G+ ++ + E
Sbjct: 123 KYCKKLRYKRQIVLVTNGKGPMDLDGMDTIAEKIREEGIELVILGVDFDDL--EFGVKEE 180
Query: 163 PHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSE---- 218
+EN++ L ++ S + + + + F+GD +L +
Sbjct: 181 DKDAAKVENESSLQGLCDVCDGVYGTLEQAISELDTPRVKVVRGIPSFKGDFKLGDPDKY 240
Query: 219 --KMKIKVWVYKKTGEEK------F------PTLKKYSDKAPSTDKFATHEVK-VDYEYK 263
+ I+V Y +T + F P +++ D + + T K E
Sbjct: 241 DSALTIQVERYFRTYAARPPPASSFVLSGAPPEIQETGDSSANLKNARTDTRKSTSNELT 300
Query: 264 SVEDP-------SKVVPPEQRI------KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLG 310
SV + S VV ++ + KGY YG V I+ ++ K + + +++++G
Sbjct: 301 SVRNARSYQVADSGVVGGKRDVERDALAKGYEYGRTAVHITESDENITKLETKAALEIVG 360
Query: 311 FTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVV 370
F + R+ M + N+ IA+ N++A +A+S++ A+ E+ A+ R V + G+ +
Sbjct: 361 FIPIEHYDRYMNMSNSNVIIAQRTNNKAIIALSSIIHALHEVESYAVGRLVTKDGKSPTL 420
Query: 371 VGVLTPNVSEKINIPD--SFYFNVLPFAEDVREFQFPSFSKFPVSWQ---------PNEQ 419
V +L P++ PD LPFAEDVR ++FP + PNE
Sbjct: 421 V-LLAPSID-----PDYECLLEVQLPFAEDVRCYRFPPLDRVTTMSGKVVKEHRNLPNEN 474
Query: 420 QQEAADNLVKMLDLAPSGK--GEILQPELTP--NPALERFYHHLELKSEHQDAAPPPLDD 475
A + V+ ++L G+ G++ L +P L R + ++ H PP+
Sbjct: 475 LLAAMEKYVENMELVQLGEEGGQVESFALQDCYSPLLHRVDQAIRWRAIHPTKPLPPIPK 534
Query: 476 SLKKITEPDPTLLAESQSAIDAFCGQFVIKEN----------PKLKKSTRRFLREKPSGS 525
L+K + L+ +S+SA++ +K+ PK+K R + +KP
Sbjct: 535 VLQKQSRQPDELMEQSKSALEQLIKTSDVKKGKLNPQHPKIPPKVKGRKRNRITDKPL-- 592
Query: 526 DEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKN 585
S D A+ E + +I I +F+ ++ D + V +A++ M
Sbjct: 593 -------SGLDVDALLQGEKR-----QRISPENAIPEFKQALANTDDINTVKEAVKQMCA 640
Query: 586 KIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFS----T 641
I +++S NY + VE + +R I +EP +ND + ++ +
Sbjct: 641 IIENQIKHSLGDANYDRVVEYIGTMRDELISFEEPDLYNDFVRELKRKLLDDELGEDRRE 700
Query: 642 FFDFLMSKKLSLISKSEAVDSDITDDEAGSFI 673
+ + K++ LI S +T+ EA F+
Sbjct: 701 LWWLIRKKRIGLIDDKLVEISKVTEQEAKEFL 732
>gi|295664851|ref|XP_002792977.1| ATP-dependent DNA helicase II [Paracoccidioides sp. 'lutzii' Pb01]
gi|226278498|gb|EEH34064.1| ATP-dependent DNA helicase II [Paracoccidioides sp. 'lutzii' Pb01]
Length = 719
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 153/701 (21%), Positives = 289/701 (41%), Gaps = 102/701 (14%)
Query: 5 REALLLLLDVSPSMHSV-----LPDVEKLCSRLIQKKLIYG-----KNHEVGVILFGTEE 54
+EA + ++DV SM + D+E R + K+ K +GVI T+
Sbjct: 4 KEATVYIVDVGKSMADCHHGRSISDLE-WAMRYVWDKITTTVATGRKTANLGVIGLKTDR 62
Query: 55 TENEL--TKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ--GTCAGDYM--------LIK 102
++N L +E Y ++ V QDI + ++ L+ + T GD + +I
Sbjct: 63 SDNPLWEKEEEESYANLTVFQDISQIHMPQIRELRKAIKISNTTEGDAISSLILAIDMIV 122
Query: 103 KYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQ---MVAFGLRMKNIVVRASL 159
+Y + K ++ + L+TD + D E VS I + +V G+ +
Sbjct: 123 RYCKKLKYRRKIVLVTDGTGAM---DTDGMEGIVSKINEENIELVVLGVDFDD--PEYGF 177
Query: 160 SGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLEL--- 216
E + EN+ L + ++ S +T+ + + F+GDL L
Sbjct: 178 KEEDKDPLKAENEKHLKQLVEDCEGSYGTLEHAISEVEIPRTKVVRSMPTFKGDLRLGDP 237
Query: 217 ---SEKMKIKVWVYKKTGEEKFPTLKKY------SDKAPSTDKFAT-------------- 253
S + I+V Y +T + P + S+ +T AT
Sbjct: 238 EQYSSALTIQVERYYRTYAARPPAASSFVPSSVLSEAHQTTQSSATLGGGAWSQESGTGP 297
Query: 254 ---HEVKVDYEY----KSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSV 306
V+ Y K + + ++ KGY YG V I+ ++ K + + ++
Sbjct: 298 ASLTSVRNARTYQVDDKEAAGGKRDLERDELAKGYEYGRTAVHITESDENITKLETDAAL 357
Query: 307 KLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQ 366
+ +GF + N R+ M N+ IA+ N++A +A+S++ A+ E+ A+ R V + G+
Sbjct: 358 EFIGFIASDNYERYMNMSTSNIIIAQKTNNKAILALSSIIHALFELECYAVARLVSKAGK 417
Query: 367 QSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSK-FPVSWQPNEQQQ---- 421
+VV +L P++ + LPFAEDVR ++FP + VS + + +
Sbjct: 418 APLVV-LLAPSIEPNY---ECLLELQLPFAEDVRPYRFPPLDEVVTVSGKTVTEHRNLPS 473
Query: 422 -----EAADNLVKMLDLAPSGKGEILQP---ELTPNPALERFYHHLELKSEHQDAAPPPL 473
AD + KM GEI++ E + +P L R + ++ H PP+
Sbjct: 474 VNLLSRMADYVDKMELTEKDEDGEIVESLSIEDSFSPLLHRIDQAIRWRAVHPSDPLPPV 533
Query: 474 DDSLKKITEPDPTLLAESQSAIDAFC-GQFVIKENPKLKKSTRRFLREKPSGSDEPNGDG 532
++L++++ L A+S+ ++ V K PK K R EKP
Sbjct: 534 PEALQRLSRQPEELQAQSKKELNKLVEASDVKKVPPKAKGRKRARDTEKP---------- 583
Query: 533 SVSDAQAVNSMESKPVVTVDKIGDLTP---IQDFEAMMSRRDCPDWVDKAIEDMKNKIFG 589
++ + + ++ +K ++P I +F+ ++ D V A++ M I
Sbjct: 584 -------LSGLNVEELLQTEKRVRISPDNAIPEFKQSLANSQNLDTVKDAVKQMSTIIEN 636
Query: 590 LLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKV 630
+++S NY +AVE L +++ + +EP +ND + +
Sbjct: 637 QIKHSLGDANYDRAVEGLGTMKEELVSFEEPGLYNDFIRSL 677
>gi|406860029|gb|EKD13090.1| putative ATP-dependent DNA helicase II subunit 2 [Marssonina
brunnea f. sp. 'multigermtubi' MB_m1]
Length = 774
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 172/745 (23%), Positives = 293/745 (39%), Gaps = 140/745 (18%)
Query: 41 KNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSL--KHLPQGTCAGDY 98
K VGV+ F T+ETEN L+ + GY+++ VL+ + +D + L K + GT AGD
Sbjct: 48 KTLSVGVVGFRTDETENPLSND-DGYDNITVLKQLGEMDMPSYEELRPKLVSSGTDAGDA 106
Query: 99 M--------LIK-----KYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVA 145
+ LI K G K + + L+TD ++D ++ Q+ + ++V
Sbjct: 107 ISAIVVAAQLIDEGTRLKSGGQAKFVRKIVLVTDGQGRIEDDNIEPIAQQLDELNIRLVV 166
Query: 146 FGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKS-----SAKTLFVDSTTSLRGARK 200
G+ + E V +N+ LL ++ VDS T
Sbjct: 167 LGVDFDD--AEYGFKEEDKSSVKRDNEKLLRKLTESCRDGDFGTMAEAVDSLT----IPA 220
Query: 201 TRDISPVTIFRGDLELSEKMK-------IKVWVYKKTGEEKFPTLKKY-----------S 242
+ + P + G L L + +K I V Y KT P+ +
Sbjct: 221 IKVVRPFKAYGGRLGLGDYVKYPESALFIDVERYSKTKRATAPSASNFVVSRAAAINGDG 280
Query: 243 DKAPSTDKFATHEVKVDYEY--KSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKF 300
D + A + + DY +S +V + KGY YG VP +F
Sbjct: 281 DTEMTDAPLAAVKNRRDYHVFDESASQGKAIVDRTELAKGYYYGSTAVPFGEDAEAETRF 340
Query: 301 KPEKSVKLLGF-----------TDASNILRHYYMKDVNL-----FIAEPGNSRATVAVSA 344
K ++S ++GF + A+ ++ Y + +N+ IAEP N +A +A+S+
Sbjct: 341 KSKESFSIIGFIPNDKVFRRDKSHATQLMPSQYERFLNMGEACVTIAEPTNDKARMAMSS 400
Query: 345 LARAMKEMNKVAIVRCVWRQGQQSVVVGVLTP----NVSEKINIPDSFYFNVLPFAEDVR 400
L A+ E A+ R V + G V++ ++ P ++ +++P LPFAEDVR
Sbjct: 401 LVHALDETESYAVARLVKKDGAGPVIL-LMAPLIDLDIECLVDVP-------LPFAEDVR 452
Query: 401 EFQFPSFSK---------FPVSWQPNEQQQEA---------------ADNLVKML----- 431
++FP K + P + + +A A ++V+ L
Sbjct: 453 NYKFPPLDKVMGISGNVIMKHRYLPADNEVQAMSDYVLCLSCLARVRAKSMVRQLTSSGM 512
Query: 432 DLAPSGKGEILQP-ELTP-----NPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDP 485
DL+ G+ E +P E P P + R H + ++ D P + L K + P
Sbjct: 513 DLSSFGRDEEGKPKEYMPIEEMYAPMVHRLQHAISYRAMQPDKPVPKPAEILLKWSHPPS 572
Query: 486 TLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNSMES 545
L+ ++ ++A + + P K R G E S D A+ S
Sbjct: 573 DLVTKASPQLEALKKAVKVSKVPPKTKGKR--------GGREVVKPMSNLDVDALLSESG 624
Query: 546 KPV-VTVDKIGDLTPIQDFEAMM-SRRDCPDWVDKAIEDMKNKIFGLLENSN-EGINYPK 602
+ V+ D I F+ M+ S D D A + + I +E S + ++ +
Sbjct: 625 RGTEVSAD-----NEIPSFKQMIGSDPDDEDLFVDASKQLCQHIRDRIETSPLDTSSFDR 679
Query: 603 AVELLVALRKGCILEQEPKQFNDVL----EKVCKICRKRNFSTFFDFLMSKKLSLI---- 654
AV + LRK I + P+ +ND L EKV + + F+ + K+L LI
Sbjct: 680 AVGAMTVLRKTAIEYELPRVYNDFLRDLKEKVFNGELGGDRTGFWQLVTKKRLGLIQVPP 739
Query: 655 ------SKSEAVDSDITDDEAGSFI 673
A S++T+ EA F+
Sbjct: 740 PDSDKVGLDTAPGSNVTEQEAADFL 764
>gi|357626202|gb|EHJ76373.1| ku P80 DNA helicase [Danaus plexippus]
Length = 706
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 170/705 (24%), Positives = 320/705 (45%), Gaps = 91/705 (12%)
Query: 1 MARTR--EALLLLLDVSPSMHSVLPD---------VEKLCSRLIQKKLIYGKNHEVGVIL 49
MA T+ + +++LDV ++ S+L D + R+I++K++ + +G+IL
Sbjct: 1 MAPTKVDQGTIIILDVGKNV-SILEDKNQKSFFESARECAVRIIERKILSQGKNLLGIIL 59
Query: 50 FGTEETENELTKEV-GGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAG--DYMLI----- 101
G++ ++N L+++ G ++++L +++ +++ L P + D +++
Sbjct: 60 LGSKISKNNLSEQTPGCCRNIELLAELQYPTWKMIRDLPTQPTKSTGNWLDALIVAVDHF 119
Query: 102 KKYGETYK-GKKHLCLITD--ALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRAS 158
K + ++K K++ L+T+ AL L++ D+ T + Q F L V+
Sbjct: 120 KSHTSSFKIADKNIILLTNFEALSDLEESDIET-----AISGFQEDGFELD----VIGPE 170
Query: 159 LSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTS--LRGARKTRDISPVTIFRGDLEL 216
L E + I+ L F + ++ T D L +KT + +P + DL +
Sbjct: 171 LYNEDNKNSDID---LARQFVEGTNGSTATFDYAMRYLLFHKKKTVNSNPWNV---DLSI 224
Query: 217 SEKMKIKVWVYKKTGEEKFPTLKKY--SDKAPSTDKF-ATHEVKVDYEYKSVEDPSKVVP 273
+KI V Y + +E P +K + S + P T+K AT ++ + + E +V
Sbjct: 225 GPNIKIPVSAYIRIKDE--PVVKNFNKSVRNPVTEKSSATEYIERKKTFINTEAQMEVES 282
Query: 274 PEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFI-AE 332
E IKGY+YG QV+P S + + KS+ + GFT + NI D ++ +
Sbjct: 283 TEV-IKGYQYGEQVIPFSDFDKSMIYDAGNKSLNVYGFTKSGNITWQNLNGDGLYYVFGQ 341
Query: 333 PGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNV 392
G+ ++ AV L + E++ VAIVR V+ G + VL P + + +
Sbjct: 342 KGDKKSEYAVRCLVECLLELDLVAIVRRVYNNGNAPRMF-VLMPVIDSENFV--GLSMAG 398
Query: 393 LPFAEDVREFQFPS--FSKFPVSWQPNEQQQEAADNLVKMLDLAPS-GKGEILQPELTP- 448
L + E+++ FP+ K+ S EQQ EA L+K +DL + + + E P
Sbjct: 399 LCYKEEIKSMAFPATNLKKYNCS----EQQVEAFKELIKAMDLTKAYDESDFDDTEAFPI 454
Query: 449 ----NPALERFYHHLELKS--EHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQF 502
+P+ + + ++ HQ P P DD + P P + ++ ++ F
Sbjct: 455 AKVVSPSAQYILDCIAFRAMNPHQ-PLPQPRDDIMVLFKVP-PLIEKRARDPMEKLKELF 512
Query: 503 VIK----ENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVN-SMESKPVVTVDKIGDL 557
+ + PK +K+ + EKP S EP D VN ++ +P + IG L
Sbjct: 513 ELNRVEVKKPK-RKTVPMDIDEKPGTSREPEIS---DDMPKVNLNVVKRPDII---IGTL 565
Query: 558 TPIQDFEAMMSR-RDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALR-KGCI 615
PI D+E + + R D + IE +++ I G ++ ++ KA++ + LR + C
Sbjct: 566 NPINDYEKLKNEGRTICDLYKQMIEAIESLIHGNIDG-----DFTKALDAMAYLRSESC- 619
Query: 616 LEQEPKQFNDVLE--KVCKICRKRNFSTFFDFLMSKKLSLISKSE 658
+ +P +N+ ++ K+ I RK+N + + LS I KSE
Sbjct: 620 -KSDPSYYNNWIKNFKLDLIDRKQN--KVLHLISEENLSYILKSE 661
>gi|170050849|ref|XP_001861497.1| ku P80 DNA helicase [Culex quinquefasciatus]
gi|167872299|gb|EDS35682.1| ku P80 DNA helicase [Culex quinquefasciatus]
Length = 722
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 131/518 (25%), Positives = 226/518 (43%), Gaps = 42/518 (8%)
Query: 170 ENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKK 229
+N+ LL KS+ +DS L R ++ + L + K++I Y
Sbjct: 204 KNEKLLADIVFKSNGALCNIDSAELLL-VHFERKVTRSMPWNCMLTIGSKLQISTSTYVL 262
Query: 230 TGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPP--EQRIKGYRYGPQV 287
EEK + S K D A ++K D+ +K+ K+ P E IKGY YG V
Sbjct: 263 ISEEKGLS----SFKTECVDPNAVVKLKTDH-FKN----DKLYEPDFEDLIKGYMYGSTV 313
Query: 288 VPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYM-KDVNLFIAEPGNSRATVAVSALA 346
VP S + + E+ + LGFT A NIL Y ++ +A+ + + ++AL
Sbjct: 314 VPYDS-QMDFDYKSGEQCLSCLGFTAAGNILEEYLCGTGTHVVVAKKDCAASEAKLTALI 372
Query: 347 RAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPS 406
+AM E++ V I V+R+ + + L P + L F E+V +FP
Sbjct: 373 KAMLELDVVMIATKVYRRDTKP-KIQALFPTFRRRF---PCLTMLELVFQEEVALLKFPP 428
Query: 407 FSKFPVSWQPNEQQQEAADNLVKMLDLA-----PSGKGEILQPELTPNPALERFYHHLEL 461
+P + Q EA D L+ +DL +G E T NP + Y +
Sbjct: 429 L--LSNRHKPTDAQYEAVDKLIDAMDLMDGLDDETGSKEAFALHKTLNPIHQHMYRTVAH 486
Query: 462 KSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKE---NPKLKKSTRRFL 518
++ H A P +D+ L+++ + + S+ A++ F +KE N +LK +L
Sbjct: 487 RAIHPKAPLPAMDEELRQLVDVPSKIRERSKEALEDIKNLFPLKELKVNAQLK-----WL 541
Query: 519 REKPSGSDEPNGDGSVSDAQAVNSMESKPV---VTVDKIGDLTPIQDFEAMMSRRDCPDW 575
++ + +P+GD + S +Q + + + TV ++G +TP +DF ++ R +
Sbjct: 542 QKTAKINVQPDGDAAGSSSQPNDGSADEELDDHRTVVEVGTVTPAEDFALLLKRGEKFAT 601
Query: 576 VDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICR 635
V I+ N I GL+ S Y K ++ R+ L P +FN+ + + K
Sbjct: 602 VCTQIQ---NVISGLVFKSMT-TQYEKVAMAIMIFREEAKL-LGPYRFNEWIGEFKKSLL 656
Query: 636 KRNFSTFFD-FLMSKKLSLISKSEAVDSDITDDEAGSF 672
RN F+ ++ ++ LI +E+ S IT +E F
Sbjct: 657 SRNKQEFWQRVVVQERFGLIGAAESEMSTITANEVEEF 694
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 8/77 (10%)
Query: 1 MARTREALLLLLDVSPSMH--------SVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGT 52
MART+EA +L+LDV + + ++++Q+K+ + EVG++L GT
Sbjct: 1 MARTKEACILILDVGKDTLVKSGKNDLTFFERAKGCVTKIVQRKIFSKPHDEVGLVLMGT 60
Query: 53 EETENELTKEVGGYEHV 69
++T N+L E GGYEH+
Sbjct: 61 DDTSNQLNVECGGYEHI 77
>gi|312069749|ref|XP_003137827.1| ku P80 DNA helicase [Loa loa]
gi|307767009|gb|EFO26243.1| ku P80 DNA helicase [Loa loa]
Length = 614
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 135/588 (22%), Positives = 238/588 (40%), Gaps = 92/588 (15%)
Query: 2 ARTREALLLLLDVSPSMH------SVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEET 55
A + E ++L+DV +M+ + + + +I +K+ E ++LFG+E T
Sbjct: 14 ALSHECTVILIDVGANMNRKGIATTDMQLAKDTVEWIITRKIFTESADEFTLVLFGSELT 73
Query: 56 ENELTKEVGGYEHVKVLQDIKV---------------VDGHLVQSL--------KHL--- 89
+N +T + + + +Q K+ +G + +L HL
Sbjct: 74 QNPVTVDENIFFCEEEMQQAKIDWLRLIDKEIKPSKSTNGDFLAALIAALDYMRNHLESW 133
Query: 90 -PQGTCAGDYMLIKKYGETYKGKKHLCL--ITDALCPLK------DPDVG-TKEDQVSTI 139
A + +L+ G + C+ + + + L+ P +G ED+ I
Sbjct: 134 PKSNITARNILLVTNLGGFNENVDEECIGAVINGMKALEINFNVIGPSIGMVSEDEDKII 193
Query: 140 ARQMVAFGLRMKNIVVRASLSGEPHMRVII----ENDNLLNIFSKKSSAKTLFVDSTTSL 195
+ + K S EP RV+ + D ++ F++ FV +L
Sbjct: 194 SNEESTIQPEEKLSNAMRSFKIEPAERVLTDILKQTDGVIYSFAEALPVLQHFVSRKVNL 253
Query: 196 RGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKT-------GEEKFPTL---------- 238
RG + +LEL +K+ + +YKK EK+ ++
Sbjct: 254 RGQK------------FNLELGIDLKLPLQMYKKIQTTDFKLAAEKYASITGTRLKRKTL 301
Query: 239 -KKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEA 297
+K D +V V + + SK+ E +KGY++G +VP ++ + +
Sbjct: 302 YEKCVKDGEVDDGLTAMDVDVGRSDCASQGSSKIFAKEI-VKGYKFGTTIVPYNAEDQKE 360
Query: 298 VKFKPE-KSVKLLGFTDASNILRHYYMKDVNLFIAEPG-NSRATVAVSALARAMKEMNKV 355
+K E + +KL+ FT S IL HY M + P + A VA+SAL AM + V
Sbjct: 361 YGWKHENRCLKLIQFTKRSQILEHYLMDGGACYFIPPALDKNACVAISALVNAMIAEDSV 420
Query: 356 AIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQ 415
A+ R V+ Q ++G L P S+K D F LPF ED R FP + P + +
Sbjct: 421 ALTRYVYNAASQPRIMG-LFPRRSKK--GVDMFVGIQLPFYEDFRGLNFPPLNS-PAT-E 475
Query: 416 PNEQQQEAADNLVKMLDLAP----SGKG---EILQPELTPNPALERFYHHLELKSEHQDA 468
P A + V+ +DL S G E L+P PNP L+ ++ ++ H +A
Sbjct: 476 PKNDHLSAMHSFVQAMDLTKAHFNSQTGQFEESLRPRDVPNPKLQNVCKAIKYRALHPNA 535
Query: 469 APPPLDDS-LKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTR 515
P +D L + EP+ LL + ++ + E+P K+ +
Sbjct: 536 PLPAFEDKLLGDLLEPNALLLKRANESLVYLKTNLPMFESPNKKQHIK 583
>gi|320034646|gb|EFW16589.1| Ku family DNA helicase [Coccidioides posadasii str. Silveira]
Length = 705
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 106/416 (25%), Positives = 183/416 (43%), Gaps = 42/416 (10%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRA 338
KGY YG V IS ++ K +++ +GF + N R+ M N+ IA+ N +A
Sbjct: 304 KGYEYGRTAVHISESDEVITKLDTTAALEFIGFIQSENYERYMNMSTSNVIIAQKINDKA 363
Query: 339 TVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD--SFYFNVLPFA 396
+A+S++ A+ E+ AI R V + G+ ++V +L P + PD LPFA
Sbjct: 364 ILALSSMIHALFELEYYAIGRLVTKDGKPPLMV-LLAPLIE-----PDFECLLEVQLPFA 417
Query: 397 EDVREFQFPSFSKF-PVSWQ--------PNEQQQEAADNLVKMLDLAPSGKG----EILQ 443
ED R ++FP K VS + P++ E V+ +DL+ + + L
Sbjct: 418 EDTRSYRFPPLDKIVTVSGKVVKEHRNLPSDDLLETMGKYVENMDLSEFDENGDPFQSLA 477
Query: 444 PELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAI-DAFCGQF 502
E +P + R + ++ H PP+ L+K++ L+ +S ++ D
Sbjct: 478 LEDCYSPLVHRIDQAIRWRAVHPTKPLPPVPKVLEKLSHWPEELVKKSHDSLRDLISISA 537
Query: 503 VIKENPKLKKSTRRFLREKP-SGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQ 561
V K PK K RR +KP SG N D + + + KI PI
Sbjct: 538 VKKVPPKAKGRKRRREADKPLSGL---NVDDLLRGEKRL------------KISPENPIP 582
Query: 562 DFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPK 621
+F+ ++ + + A++ M I + S INY +A+E + +R+ I +EP
Sbjct: 583 EFKQTLANTEDISAISDAVKQMSAIIEDQIRQSLGDINYDRAIEGIGTMREELIAYEEPG 642
Query: 622 QFNDVL----EKVCKICRKRNFSTFFDFLMSKKLSLISKSEAVDSDITDDEAGSFI 673
+ND + EK+ + + + +L LI + SDIT+++A F+
Sbjct: 643 LYNDFIRGLKEKLLDDKLGGDRREMWWLIRKSRLGLIDQKALDISDITEEQAREFL 698
>gi|397491845|ref|XP_003816850.1| PREDICTED: X-ray repair cross-complementing protein 5-like [Pan
paniscus]
Length = 720
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 162/365 (44%), Gaps = 18/365 (4%)
Query: 214 LELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVP 273
L + + I++ YK +E+ D +++ + Y +D V
Sbjct: 346 LTIGSNLSIRIAAYKSILQERVKKTWTVVD----AKTLKKEDIQKETVYCLNDDDETEVL 401
Query: 274 PEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNILRHYYMKDVNL-FIA 331
E I+G+RYG +VP S + E +K+K E K +LGF +S + R ++M + L A
Sbjct: 402 KEDIIQGFRYGSDIVPFSKVDEEQMKYKSEGKCFSVLGFCKSSQVQRRFFMGNQVLKVFA 461
Query: 332 EPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFN 391
+ A VA+S+L A+ +++ VAIVR + + + + VGV P++ + +
Sbjct: 462 ARDDEAAAVALSSLIHALDDLDMVAIVRYAYDK-RANPQVGVAFPHIKHNY---ECLVYV 517
Query: 392 VLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKG-----EILQPEL 446
LPF ED+R++ F S K + P E Q A D L+ + LA + ++
Sbjct: 518 QLPFMEDLRQYMFSSL-KNSKKYAPTEAQLNAVDALIDSMSLAKKDEKTDTLEDLFPTTK 576
Query: 447 TPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKE 506
PNP +R + L ++ H PP+ + + P + +SQ + F + E
Sbjct: 577 IPNPRFQRLFQCLLHRALHPREPLPPIQQHIWNMLNPPAEVTTKSQIPLSKIKTLFPLIE 636
Query: 507 NPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVN-SMESKPVVTVDKIGDLTPIQDFEA 565
K + T + + + + D P ++ + S+ S +V +G + P ++F
Sbjct: 637 AKKKDQVTAQEIFQD-NHEDGPTAKKLKTEQGGAHFSVSSLAEGSVTSVGSVNPAENFRV 695
Query: 566 MMSRR 570
++ ++
Sbjct: 696 LVKQK 700
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 59/106 (55%), Gaps = 13/106 (12%)
Query: 4 TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
+ A++L +DV +M + +P +E K+ + +Q+++ E+ ++LFGT+ T+
Sbjct: 101 NKAAVVLCMDVGFTMSNSIPGIESPFEQAKKVITMFVQRQVFAENKDEIALVLFGTDGTD 160
Query: 57 NELTKEVGG--YEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDYM 99
N L+ GG Y+++ V + + + D L++ ++ Q G+ D++
Sbjct: 161 NPLS---GGDQYQNITVHRHLMLPDFDLLEDIESKIQPGSQQADFL 203
>gi|336365737|gb|EGN94086.1| hypothetical protein SERLA73DRAFT_114994 [Serpula lacrymans var.
lacrymans S7.3]
Length = 614
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 126/270 (46%), Gaps = 31/270 (11%)
Query: 269 SKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNL 328
S+ V EQ I+G++YG P ++ + +K + + GF A N R M +V
Sbjct: 122 SEKVEKEQLIRGFKYGTTYAPCPDGQFP--RLPTQKGMDICGFFQARNFRRELAMGEVQY 179
Query: 329 FIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSF 388
A+P +++ VA+S++ +AM E + +AI R V + G +GVL P+V +KI D
Sbjct: 180 IWADPSSAQQQVALSSIVQAMYEKDVLAIARWVTKDGMDP-KMGVLAPSVFDKI---DCL 235
Query: 389 YFNVLPFAEDVREFQFPSFS-----------KFPVSWQPNEQQQEAADNLVKMLDLAPSG 437
+ +PFA+DVR++ F S K P + P + Q A +N V +DL +G
Sbjct: 236 LWVQMPFADDVRKYNFASLDYLMSKKGERIMKHP--YIPTDDQLSAMENFVDAMDLMDAG 293
Query: 438 KGE-------ILQPELTPNPALER----FYHHLELKSEHQDAAPPPLDDSLKKITEPDPT 486
+ L+ NPA+ R +H + + PPP + LK EP
Sbjct: 294 DKDEEGNRYPWFDTRLSYNPAVHRTKQALFHSAVVNDLITNPIPPPHPELLKYF-EPPKK 352
Query: 487 LLAESQSAIDAFCGQFVIKENPKLKKSTRR 516
+L ++ AI+ F +KE PK R+
Sbjct: 353 VLKRARDAIEDCKQAFKVKEVPKKVARARK 382
>gi|121934976|sp|Q0U8L4.1|KU80_PHANO RecName: Full=ATP-dependent DNA helicase II subunit 2; AltName:
Full=ATP-dependent DNA helicase II subunit Ku80
Length = 715
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 130/534 (24%), Positives = 224/534 (41%), Gaps = 86/534 (16%)
Query: 200 KTRDISPVTIFRGDLELSE------KMKIKVWVYKKTGEEKFPTLKKYSDKA-------- 245
+ ++ PV F+G L L + + I V Y T K PT ++ +
Sbjct: 203 RLKETRPVPSFKGQLTLGDPGHYDATLTIDVERYPCTMLAKPPTASSFATRTDFGAGSAA 262
Query: 246 ---------------PSTDKFATHEVKVDYEYKSVEDPS--KVVPPEQRIKGYRYGPQVV 288
P TD A +V Y+ + E+P K V ++ +GY YG V
Sbjct: 263 GPSDESSHTMTGEEQPMTDLSAVRNQRV-YQVDNEEEPGMKKNVEMDELERGYEYGRTAV 321
Query: 289 PISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARA 348
IS ++ VK + + L+GF A R+ + N + + GN A +++S+ A
Sbjct: 322 HISESDMNVVKLETTPMLSLIGFVKAEAFERYLPLSRSNFLVPQRGNQAAQLSLSSFIHA 381
Query: 349 MKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNV-LPFAEDVREFQFPSF 407
+ E + A+ R V ++ + V+V +L P +I + +V LPF ED+R ++FP
Sbjct: 382 LYEADCYAVARLVTKELKPPVIV-LLVP----RIEVEWEALVDVELPFEEDMRRYKFPPL 436
Query: 408 S-KFPVSWQ--------PNEQQQEAADNLVKMLDLAPSGK------GEILQPELTPNPAL 452
K +S + P ++ +A V +DL+ G+ E +PE T +P +
Sbjct: 437 DRKLTISGKVITEHKDLPTDELTDAMSKYVDAMDLSTFGRDEDGNPAEYAKPEDTFSPIV 496
Query: 453 ERFYHHLELKSEHQDAAPPPLDDS--LKKITEPDPTLLAESQSAIDAF-CGQFVIKENPK 509
R H + ++ H D + P S L K P LL S S +A V K PK
Sbjct: 497 HRIGHIIRWRATHPDPSLPMPPPSDILTKYANPPADLLDASTSQFEALKKAARVSKVPPK 556
Query: 510 LKKSTRRFL--REKP-SGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAM 566
+K +R R+KP SG D ++++ P +L P F+
Sbjct: 557 VKGRGKRNRAERDKPISGLD-------------IDALLGNPNRVKIDPSNLVP--SFKNA 601
Query: 567 MSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFN-- 624
++ D + + +A + M +I L+ +S Y +A+E L +R +EP+ +N
Sbjct: 602 LAASDDLETIKEAAQSMSTEIRSLIRSSVGDSGYGRALEALRVMRDELTELEEPEIWNEF 661
Query: 625 ------DVLEKVCKICRKRNFSTFFDFLMSKKLSLISKSEAVDSDITDDEAGSF 672
D+LE RK + + + L+ + + SD+T++EA +F
Sbjct: 662 IRGLKSDLLEGKLNGNRKDMWWK----IRGNRYGLVDRKRSFVSDVTEEEASAF 711
>gi|169617443|ref|XP_001802136.1| hypothetical protein SNOG_11900 [Phaeosphaeria nodorum SN15]
gi|160703409|gb|EAT80944.2| hypothetical protein SNOG_11900 [Phaeosphaeria nodorum SN15]
Length = 618
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 117/463 (25%), Positives = 204/463 (44%), Gaps = 57/463 (12%)
Query: 242 SDKAPSTDKFATHEVKVDYEYKSVEDPS--KVVPPEQRIKGYRYGPQVVPISSAEWEAVK 299
++ P TD A +V Y+ + E+P K V ++ +GY YG V IS ++ VK
Sbjct: 177 GEEQPMTDLSAVRNQRV-YQVDNEEEPGMKKNVEMDELERGYEYGRTAVHISESDMNVVK 235
Query: 300 FKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVR 359
+ + L+GF A R+ + N + + GN A +++S+ A+ E + A+ R
Sbjct: 236 LETTPMLSLIGFVKAEAFERYLPLSRSNFLVPQRGNQAAQLSLSSFIHALYEADCYAVAR 295
Query: 360 CVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNV-LPFAEDVREFQFPSFS-KFPVSWQ-- 415
V ++ + V+V +L P +I + +V LPF ED+R ++FP K +S +
Sbjct: 296 LVTKELKPPVIV-LLVP----RIEVEWEALVDVELPFEEDMRRYKFPPLDRKLTISGKVI 350
Query: 416 ------PNEQQQEAADNLVKMLDLAPSGK------GEILQPELTPNPALERFYHHLELKS 463
P ++ +A V +DL+ G+ E +PE T +P + R H + ++
Sbjct: 351 TEHKDLPTDELTDAMSKYVDAMDLSTFGRDEDGNPAEYAKPEDTFSPIVHRIGHIIRWRA 410
Query: 464 EHQDAAPPPLDDS--LKKITEPDPTLLAESQSAIDAF-CGQFVIKENPKLKKSTRRFL-- 518
H D + P S L K P LL S S +A V K PK+K +R
Sbjct: 411 THPDPSLPMPPPSDILTKYANPPADLLDASTSQFEALKKAARVSKVPPKVKGRGKRNRAE 470
Query: 519 REKP-SGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVD 577
R+KP SG D ++++ P +L P F+ ++ D + +
Sbjct: 471 RDKPISGLD-------------IDALLGNPNRVKIDPSNLVP--SFKNALAASDDLETIK 515
Query: 578 KAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFN--------DVLEK 629
+A + M +I L+ +S Y +A+E L +R +EP+ +N D+LE
Sbjct: 516 EAAQSMSTEIRSLIRSSVGDSGYGRALEALRVMRDELTELEEPEIWNEFIRGLKSDLLEG 575
Query: 630 VCKICRKRNFSTFFDFLMSKKLSLISKSEAVDSDITDDEAGSF 672
RK + + + L+ + + SD+T++EA +F
Sbjct: 576 KLNGNRKDMWWK----IRGNRYGLVDRKRSFVSDVTEEEASAF 614
>gi|158298889|ref|XP_319031.4| AGAP009910-PA [Anopheles gambiae str. PEST]
gi|157014103|gb|EAA14064.4| AGAP009910-PA [Anopheles gambiae str. PEST]
Length = 681
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 150/676 (22%), Positives = 297/676 (43%), Gaps = 77/676 (11%)
Query: 45 VGVILFGTEETENELTKEVGGYEHVK--------VLQDIKVVDGHLVQS---LKHLPQGT 93
VG++LFGT+ET N+L + GGYE++ Q ++++ +VQ+
Sbjct: 3 VGIVLFGTDETNNQLNVDSGGYENITEAFELKPPNWQTLRILQNQVVQTESEAGWFDALI 62
Query: 94 CAGDYMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNI 153
A +++ G+ + G + ++ L D D G E I+ L + ++
Sbjct: 63 VATNFLRNGALGKKFTG--YSIILLSPLFVAGDIDQGQLESVADGISNM-----LGVLHV 115
Query: 154 VVRASLSGEPHMRVIIENDNLLNIFSKKSSAKT-------LFVDST----TSLRGARK-- 200
+ L + I + + K+ A+T +D+T ++ A +
Sbjct: 116 ITNYVLHPAASVASIFTTTGTFDEQASKTEARTENERYVRQILDATDGTLANINWAERML 175
Query: 201 ----TRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEV 256
+ + P T + L + K+K+ + Y E+K L + K S D A+ V
Sbjct: 176 TFFDAKAVRP-TPWNSTLTIGTKVKLSISAYYIVCEQK--GLGSF--KVDSVDDAASR-V 229
Query: 257 KVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKP-EKSVKLLGFTDAS 315
++ +Y + P+++ + I GY YG VVP + +++K + + LGFT +S
Sbjct: 230 EMRTQYFLNDKPAEI-SMQDIIMGYMYGSTVVPYDNTI--DIEYKSGDCRLACLGFTASS 286
Query: 316 NILR-HYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL 374
NIL H K ++ +A+ G + + AL +AM E+N V I V+R+ + + L
Sbjct: 287 NILEEHLSGKGSHVVVAKKGCGASNQKLCALVKAMHELNVVMIATKVYRKDTKP-RLNAL 345
Query: 375 TPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV---KML 431
P + K P ++ F +++ +FPS K + +P +Q +A D L+ ++
Sbjct: 346 IP--TYKHGNPCLVMLELI-FKDELCSLKFPSLLKSSKN-KPTNEQYDAVDKLIDSMNLM 401
Query: 432 DLAPSGKGEILQP---ELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLL 488
D GE + T NP L+ Y + ++ + P ++ +L+++ + ++
Sbjct: 402 DAVDDSNGECREAFALNSTFNPTLQHVYRTVAHRALNPKQPLPDVNSTLQELIDVPKKVV 461
Query: 489 AESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPS----GSDEPNGDGSVS-------DA 537
S+ A++ F +KE +K++TR ++ + G+D S + D
Sbjct: 462 DRSKPALEEVRKAFELKE---IKQNTRAEWLQRMAKIKVGTDASGSSSSTTIDSGVLMDE 518
Query: 538 QAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEG 597
+A + + V +G +TP +DF A++ RR + ++N +F LL S
Sbjct: 519 EADDGSDDANRRMVVSVGTVTPAEDF-ALLLRRG--EKFATVATQLQNAVFELLFTSMRP 575
Query: 598 INYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFD-FLMSKKLSLISK 656
K + L+A R + P ++N+ + + ++ R + F++ ++ +KL LI
Sbjct: 576 PG-SKVIAALLAYRSEA-QKLGPYRYNEWMTEFKEMLLTRQKADFWETVIVGEKLGLIDS 633
Query: 657 SEAVDSDITDDEAGSF 672
E+ S ++ D+A +F
Sbjct: 634 QESEMSTVSVDQAANF 649
>gi|340727268|ref|XP_003401969.1| PREDICTED: x-ray repair cross-complementing protein 5-like [Bombus
terrestris]
Length = 560
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 123/508 (24%), Positives = 217/508 (42%), Gaps = 71/508 (13%)
Query: 5 REALLLLLDV---SPSM---HSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENE 58
+E+L+LL+++ +P++ HS+L + + R IQK + N +V ++L G+ T+N
Sbjct: 7 KESLVLLINIGVTNPNIENNHSLLEKAKHIAKRKIQKMIFLTPNDKVAIMLMGSGVTKNR 66
Query: 59 LTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDYM-------LIKKYGETYKGK 111
L EHV+ D ++ LV+ L +++ L K
Sbjct: 67 L-----DTEHVEEFTDFQIPKWDLVKKCMALEGTNHCSNWIEALEAAVLFMKENTILPST 121
Query: 112 KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVV----RASLSGEPHMRV 167
+ + L++D +DPD+ +S +A L I++ +++S P +
Sbjct: 122 RKIILMSDF---NEDPDI------ISQFQADAIADCLSTNKIILVTLSESTISPTPTLSE 172
Query: 168 IIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVY 227
+ LL ++K + + D+ S P + LEL +K KI V Y
Sbjct: 173 V-----LLKDVNEKINGHHITFDNAISDMKFYTPIPSKPSPSYYS-LELLDK-KIPVVSY 225
Query: 228 KKTGEEKFPTLKKY--SDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGP 285
K + FP KK K S K+ + +V Y +++ KGY+YG
Sbjct: 226 GKVRKTNFPPWKKAKGDQKLRSETKYLDRQ-RVSYTADNIQ------------KGYKYGG 272
Query: 286 QVVPI-SSAEWEAVKFKPEKSVKLLGFTDASNI-LRHYYMKDVNLFIAEPGNSRATVAVS 343
+ + E + E+S ++ GFTD +N+ L ++Y ++ + +
Sbjct: 273 DFISVPEDLEMNIRQKDSERSYRIYGFTDRNNVDLEYFYKSSSSVILPNSQTNNVVKPFY 332
Query: 344 ALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNV---LPFAEDVR 400
+L +AM E N VAIVR ++++G +V + I+IPD + + L FAED R
Sbjct: 333 SLVQAMHETNSVAIVRKIFKKGGVPRMVALFPC-----IDIPDEPWCLIEIQLVFAEDRR 387
Query: 401 EFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKG------EILQPELTPNPALER 454
+ S Q N Q EA D+L+ L L + E P PNP ++
Sbjct: 388 IMETRSMKS--TIKQLNTPQNEAIDSLIDSLMLTDTENDSQIDGCECFLPGCMPNPGVQH 445
Query: 455 FYHHLELKSEHQDAAPPPLDDSLKKITE 482
+ L ++ + D PP+++ LK+I E
Sbjct: 446 RWDMLSYRAINPDKPLPPVENYLKEIFE 473
>gi|296419253|ref|XP_002839231.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295635242|emb|CAZ83422.1| unnamed protein product [Tuber melanosporum]
Length = 665
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 100/418 (23%), Positives = 176/418 (42%), Gaps = 62/418 (14%)
Query: 275 EQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 334
EQ KGY YG +VPIS+ + + E ++++GF R++ M N +
Sbjct: 289 EQMEKGYNYGRTIVPISATDEAITVLETEPGLRIIGFVPVEKYRRYFSMSTTNAIVGAKD 348
Query: 335 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLP 394
N +A++A+S+L A+ E+ + V+ +P
Sbjct: 349 NLKASMALSSLIHALFELESLIDVQ---------------------------------VP 375
Query: 395 FAEDVREFQFPSFSKFPV---------SWQPNEQQQEAADNLVKMLDLAPS----GKGEI 441
F+EDVR ++FP K + P ++ + V +DL + G+ E
Sbjct: 376 FSEDVRHYRFPPLDKVKTVSGKVLEKHRFLPTPHVEKLMSDYVDKMDLMVANEDEGEPEY 435
Query: 442 LQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQ 501
+ T +P L R + ++ H D P D L K + P TLL S +A+
Sbjct: 436 ATVDETFSPILHRINQIVRWRAVHPDEPLPLAHDILTKYSYPPKTLLGVSTNALQKLIEA 495
Query: 502 FVIKE-NPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPI 560
+K +PKL + R+ RE+P+ S D +A+ + + V KI PI
Sbjct: 496 SDVKRVDPKL--AGRKRGREQPAPK-------SGLDVEALLTSAAPSVPKKAKISSANPI 546
Query: 561 QDFE-AMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQE 619
DF+ + + D D + +A ++M + L++ S NY + E+L +R+ I E
Sbjct: 547 PDFKNKLRTTEDLSD-LKEAGKEMLAVLKELIKYSLADANYGRVCEILKVMREEYIEYDE 605
Query: 620 PKQFNDVLEKVCKICRKRNFST----FFDFLMSKKLSLISKSEAVDSDITDDEAGSFI 673
P +N VL+++ + +D + +L LI+K E+ ++ D A F+
Sbjct: 606 PGIYNIVLQRLKEAIVSEELDGDRMECWDGIRYNRLGLITKGESERVEVDDAAARRFL 663
>gi|259479030|dbj|BAI40068.1| Ku80 [Trichophyton interdigitale]
Length = 728
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 98/415 (23%), Positives = 183/415 (44%), Gaps = 40/415 (9%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRA 338
KGY YG V I+ + K + + +++++GF N R+ M + N+ IA+ N++A
Sbjct: 329 KGYEYGRTAVHITDSMENITKLETKAALEIVGFIPIENYDRYMNMSNANVIIAQRTNNKA 388
Query: 339 TVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD--SFYFNVLPFA 396
+A+S++ A+ E+ A+ R V + G+ +V +L P++ PD LPFA
Sbjct: 389 IIALSSIIHALHEVESYAVGRLVTKDGKSPTLV-LLAPSID-----PDYECLLEVQLPFA 442
Query: 397 EDVREFQFPSFSKFPVSWQ---------PNEQQQEAADNLVKMLDLA-PSGKGEILQP-- 444
EDVR ++FP + P+E A + V+ ++L P +G+ ++
Sbjct: 443 EDVRCYRFPPLDRVTTMSGKVVKEHRNLPDENLLAAMEKYVENMELVQPGEEGDQVESFA 502
Query: 445 -ELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFC-GQF 502
+ +P L R + ++ H PP+ L+ + L+ +S+SA++
Sbjct: 503 LQDCYSPLLHRVDQAIRWRATHPTKPLPPIPGILQNQSRQPEDLMEQSKSALEQLIKASD 562
Query: 503 VIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQD 562
V K PK+K R +KP S D A+ E + +I I +
Sbjct: 563 VKKVPPKVKGRKRNRTTDKPL---------SGLDVDALLQGEKR-----QRISPENAIPE 608
Query: 563 FEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQ 622
F+ ++ D + V ++++ M I +++S NY + VE L +R I +EP
Sbjct: 609 FKQALASTDDINTVKESVKQMCAIIENQIKHSLGDANYDRVVEYLGTMRDELISFEEPDL 668
Query: 623 FNDVLEKVCKICRKRNFS----TFFDFLMSKKLSLISKSEAVDSDITDDEAGSFI 673
+ND + ++ + + + K++ LI S +T+ EA F+
Sbjct: 669 YNDFVRELKRKLLDDKLGEDRRELWWLIRKKRIGLIDDKLVEISKVTEQEAKEFL 723
>gi|15825665|pdb|1JEQ|B Chain B, Crystal Structure Of The Ku Heterodimer
gi|15825717|pdb|1JEY|B Chain B, Crystal Structure Of The Ku Heterodimer Bound To Dna
Length = 565
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 131/286 (45%), Gaps = 16/286 (5%)
Query: 214 LELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVP 273
L + + I++ YK +E+ K + +++ + Y +D V
Sbjct: 251 LTIGSNLSIRIAAYKSILQERV----KKTWTVVDAKTLKKEDIQKETVYCLNDDDETEVL 306
Query: 274 PEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNILRHYYMKDVNL-FIA 331
E I+G+RYG +VP S + E +K+K E K +LGF +S + R ++M + L A
Sbjct: 307 KEDIIQGFRYGSDIVPFSKVDEEQMKYKSEGKCFSVLGFCKSSQVQRRFFMGNQVLKVFA 366
Query: 332 EPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFN 391
+ A VA+S+L A+ +++ VAIVR + + + + VGV P++ + +
Sbjct: 367 ARDDEAAAVALSSLIHALDDLDMVAIVRYAYDK-RANPQVGVAFPHIKHNY---ECLVYV 422
Query: 392 VLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKG-----EILQPEL 446
LPF ED+R++ F S K + P E Q A D L+ + LA + ++
Sbjct: 423 QLPFMEDLRQYMFSSL-KNSKKYAPTEAQLNAVDALIDSMSLAKKDEKTDTLEDLFPTTK 481
Query: 447 TPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQ 492
PNP +R + L ++ H PP+ + + P + +SQ
Sbjct: 482 IPNPRFQRLFQCLLHRALHPREPLPPIQQHIWNMLNPPAEVTTKSQ 527
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 62/111 (55%), Gaps = 15/111 (13%)
Query: 1 MART--REALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFG 51
M R+ + A++L +DV +M + +P +E K+ + +Q+++ E+ ++LFG
Sbjct: 1 MVRSGNKAAVVLCMDVGFTMSNSIPGIESPFEQAKKVITMFVQRQVFAENKDEIALVLFG 60
Query: 52 TEETENELTKEVGG--YEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDYM 99
T+ T+N L+ GG Y+++ V + + + D L++ ++ Q G+ D++
Sbjct: 61 TDGTDNPLS---GGDQYQNITVHRHLMLPDFDLLEDIESKIQPGSQQADFL 108
>gi|358337029|dbj|GAA55452.1| ATP-dependent DNA helicase 2 subunit 2, partial [Clonorchis
sinensis]
Length = 1241
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 153/687 (22%), Positives = 287/687 (41%), Gaps = 130/687 (18%)
Query: 36 KLIYGKNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKH------- 88
K G+ E V+L GTE T+N L E G + H+ +++ + +D L++
Sbjct: 6 KFFQGEKEEFAVVLCGTEATDNGLADEDGNFVHISLVRALAPLDWDLLEFFNSESLLSTN 65
Query: 89 ---LPQGTCAGDYMLIKKYGETYKG--KKHLCLITDALCPLKDPDVG--TKEDQVSTIAR 141
+ G L+ + + KG +K + LI++ L P + +++ +
Sbjct: 66 DADVVDALIVGVNHLVTQCKDR-KGLSEKRILLISNLLGPADISQLTEVAHNLRIADVKL 124
Query: 142 QMVAFGLRMKNI---VVRASLS-------------GEPHMRVIIENDNLLNIFSKKSSAK 185
++ F L + RA LS G+P +V + +++S+ +
Sbjct: 125 SLIGFSLPEGSAPPESERAVLSPNSHPGPSSSRTNGDPQFKVHPAQKAIGDLWSQLNGES 184
Query: 186 TLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKA 245
F ++ +L +TR ++ ++ D ++ + + + V + + E + P L +
Sbjct: 185 YTFDEAIPAL-AYFETRAVAQRG-WKVDFQIGDSLSLPVEGFTQVREARPPALTQLYAAC 242
Query: 246 PSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKS 305
PST ++ Y + ++ + + Q I+G+RYG +VP ++ + AV+ EK
Sbjct: 243 PST------PIRAITTYCTQDENATELQSTQVIRGHRYGNTMVPFTAEDKAAVQPAGEKC 296
Query: 306 VKLLGFTDASNILRHYYMKD-VNLFIAE-PG-NSRATVAVSALARAMKEMNKVAIVRCVW 362
+ L+GFT ASN+ + ++ D V +F+A P N ++ALA+A+ E+N VA+VR V+
Sbjct: 297 LTLIGFTPASNVPINLHLGDSVLVFVANCPAENHPVAQGLAALAQALFELNGVALVRRVY 356
Query: 363 RQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSF------SKF---PVS 413
+ + +GVL P V + ++ L FA+DVR FQFPS SK P
Sbjct: 357 NR-VSAPRLGVLIPEVR---GTQVALFYTDLAFADDVRTFQFPSLPLRTTPSKSHVKPDR 412
Query: 414 WQPNEQQQEAADNLVKML-------------------DLAPSGKGEILQPELTPNPALER 454
P ++Q +A D V L D A G ++PE P+P ++R
Sbjct: 413 HTPTDEQLKAMDEFVSSLILGKMSDEDDSDAECNERQDEANFGLALDVKPEQLPSPWIQR 472
Query: 455 FYHHLELKSEH--QDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFV-IKEN---- 507
+ + + + P + S+ D L+A++ ++ + + EN
Sbjct: 473 LFTCFRERGLNPTESLIPSTSNQSM------DSWLVAQNLPGLEQLLARIAPVYENASGN 526
Query: 508 --------------PKLKK--------------STRRFLREKPSGSDEPNGDGSVSDAQA 539
P L RR + + G + +V + QA
Sbjct: 527 DPVSSARRHLLDCLPTLSSVEKEQEGESGASAAKRRRLMAAELFGLQTNDSSLTVDNTQA 586
Query: 540 VNSMES----------KPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFG 589
NS V + +G + P+ DF+ ++++ D + A + ++++I
Sbjct: 587 SNSFTGGGGLILNSALSQVSQLTDVGSVDPVGDFDKLLAQGD----IRFASQRLESRIVQ 642
Query: 590 LLENSNEG-INYPKAVELLVALRKGCI 615
L+ + G I P+AV LVA R+ I
Sbjct: 643 LVTDPYTGSILRPRAVSCLVAYRERAI 669
>gi|453088076|gb|EMF16117.1| Ku family DNA helicase [Mycosphaerella populorum SO2202]
Length = 728
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 95/417 (22%), Positives = 187/417 (44%), Gaps = 32/417 (7%)
Query: 270 KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLF 329
K V ++ +GY YG V IS ++ F+ + ++GF + ++ + +
Sbjct: 315 KDVGRDELAQGYEYGRTAVHISESDRNVTAFETLPGLDVVGFVHKDHYRQYLDLSRAYMT 374
Query: 330 IAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFY 389
+++ + +A++A+S+L RA+ E++ AI R V ++ ++ +L PN+ + Y
Sbjct: 375 VSKKADEKASMALSSLIRALYELDSYAIARFVAKENSNPKLL-LLVPNIEPDF---ECLY 430
Query: 390 FNVLPFAEDVREFQFPSFSK-FPVSWQ--------PNEQQQEAADNLVKMLDLA---PSG 437
LPFAEDVR ++FP + VS + PN+ A + V +DL+ +
Sbjct: 431 DVELPFAEDVRNYKFPPLDRVLTVSGKSLKVHRHLPNDDLMSAMSDYVDAMDLSHATTND 490
Query: 438 KGEILQP---ELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSA 494
+GE ++ + T P L R H + ++ +A PP + K + P L +++ A
Sbjct: 491 EGESIEYGALDDTYAPKLHRLQHVIRHRAIFPEADPPEARPIIHKYSHPPEDLAEKAKPA 550
Query: 495 IDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNSMESKPVVTVDKI 554
++ +K+ P K +R+ R++ S +SD + P +I
Sbjct: 551 LERVIKAGEVKKVPP-KARGKRWNRKETS--------KPLSDLDVAALLAHDPARKGKRI 601
Query: 555 GDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGC 614
I +F+ M+ D + ++ A + +K IF +++S G Y A+E + +R+ C
Sbjct: 602 DPKNAIPEFKQMVEAADGLEQIEDACKQLKFVIFDWIKHSVGGSAYGSAIEGVRVMRETC 661
Query: 615 ILEQEPKQFNDVL----EKVCKICRKRNFSTFFDFLMSKKLSLISKSEAVDSDITDD 667
+ P ++ L +KV + + + K+ I K+E SD T++
Sbjct: 662 EEYEHPMPYHAFLTELKQKVLGGELGGDRKEMWYTVRVNKMRPILKTECAGSDYTEE 718
>gi|154341439|ref|XP_001566671.1| putative KU80 protein [Leishmania braziliensis MHOM/BR/75/M2904]
gi|134063996|emb|CAM40187.1| putative KU80 protein [Leishmania braziliensis MHOM/BR/75/M2904]
Length = 792
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 124/514 (24%), Positives = 220/514 (42%), Gaps = 86/514 (16%)
Query: 4 TREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELTKEV 63
+++A +L+LD++ S + L + LC+R++ K++Y EV VIL GTE++ + L +
Sbjct: 2 SKDATVLVLDITLSRAAALEEACDLCTRILTDKMVYSPLDEVAVILAGTEKSRSALYDQS 61
Query: 64 GG--YEHV-----------KVLQDIKVVDGHLVQSLKHLPQG-------TCAGDYM---- 99
G Y+H+ K+L I +V LP G T A D++
Sbjct: 62 GQARYQHITVAVELGPATEKILVPIAATRAGVVA----LPGGATVQRPITEAYDFIDALQ 117
Query: 100 ----LIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTI-ARQ-----MVAFGLR 149
L++ + + + L+TDA +V KED + I A Q +V G
Sbjct: 118 VAVALLQARTSQRRCNRCIYLLTDA-----RHEVRHKEDLLFLIDALQHDQITLVVIGFD 172
Query: 150 MKNIVVRA--------SLSGEPHMRVII----ENDNLLNIFSKKSSAKTLFVDST----- 192
+ + S +G+ V + +N+ +L + + +
Sbjct: 173 FQALPAGTASQEECDESSTGDTSAWVGLDRKAQNEKVLGALCTELGPPSTLISPAEALDR 232
Query: 193 TSLRGARKTRD--ISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDK 250
SL RK R + + + GD+ L+ ++ + T EE+ P L++ ST
Sbjct: 233 LSLLHCRKIRQQPMFKIALRIGDVRLATQL------FTLTQEERLPALRR------STQD 280
Query: 251 FATHEVKVDYEYKS-VEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLL 309
A V+Y S V++ + + E+R++ + +G V S A+ E +K K ++++ +
Sbjct: 281 GADVVQSVEYVTPSDVDEQPRALAKEERMEVFFFGADRVSCSEADREEMKVKGPRALEAI 340
Query: 310 GFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSV 369
GF + + M + G+ +AL AM K +VR V R +
Sbjct: 341 GFVGETEVEPCLLMGGTRALLPLAGDHAGQRGFNALVDAMVSSGKAMLVRLV-RTAHATP 399
Query: 370 VVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFP-VSWQPNEQQQEAADNLV 428
++ V V+E + LPFAED+R + FS++P V + E+Q D L+
Sbjct: 400 LLCVCFARVAETASGQRHLVLAPLPFAEDMRALR---FSEYPEVRFSKAEEQ--LMDELI 454
Query: 429 KMLDLAPSGKGEILQPELTPNPALERFYHHLELK 462
L S G +L P+ T NP L+++Y L+ K
Sbjct: 455 DGL----SVDGSVLAPQDTFNPVLQQYYATLQAK 484
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 84/175 (48%), Gaps = 20/175 (11%)
Query: 516 RFLREKPSGSDEPNGDGSVSDAQAVNS-----MESKP---VVTVDKIGDLTPIQDFEAMM 567
R L+ + G + S+A ++++ M P + +VD +G + + A
Sbjct: 606 RDLKCSAEADNASAGSHATSEAASISTAPHDIMSGDPSFVITSVDPVGTFSMVVRNPAAT 665
Query: 568 SRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVL 627
+ ++KA +D+ N I+ LL +S +G Y K + ++ALR+ C+ + + ++D L
Sbjct: 666 EAQ-----LNKAKDDLSNLIWELLHSSVKGAFYRKCMACIMALRQFCVTQDDAAYYSDFL 720
Query: 628 EKVCKICRK--RNFSTFFDFLMSKKLSL----ISKSEAVDSDITDDEAG-SFIVK 675
K+ + ++ R+ + +++ +K S I+ E + + DD A SF+ K
Sbjct: 721 LKLAVVAQQCGRDADFWIPYVVERKDSANVWPITAQECKSASLPDDTAAESFLQK 775
>gi|312371754|gb|EFR19861.1| hypothetical protein AND_21697 [Anopheles darlingi]
Length = 672
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 161/666 (24%), Positives = 289/666 (43%), Gaps = 67/666 (10%)
Query: 50 FGTEETENELTKEVG-GYEHVKVLQDIKVVDGHLVQSLKH--LPQGTCAG--DYMLIK-- 102
GT+ET N++ E G GYEH+ ++K+ + H + L++ L + A D +++
Sbjct: 1 MGTDETSNQVNTEHGSGYEHICEASELKLPNWHTSRVLENKVLRSNSEANWYDALIVAVD 60
Query: 103 --KYGETYKGKKHLCLITDALCPLKDPDVGTKED-------------QVSTIARQMVAFG 147
+ G + KHL + + PL P ++ + QV I+ Q+
Sbjct: 61 FLRAGTANRSFKHLHIFL--ISPLAMPAEVSQSEIRYLLDNLEVMLCQVHIISDQIEHSN 118
Query: 148 LRMKNIVVRASLSG-----EPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTR 202
+ + S SG E I+N+NLLN +K + G +
Sbjct: 119 PITTSTIFTPSSSGTFVDEEVKSEDRIKNENLLNEIMQKEGFTLTNISMAHRCLGFYVPK 178
Query: 203 DISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEY 262
+ P T + L + K+K + Y E+K K + ST A VK+ ++
Sbjct: 179 PVRP-TPWNSTLTIGTKLKFAISAYLLISEQKGLGPFKVTSAGGST---ANSVVKMRTQH 234
Query: 263 KSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYY 322
E P + E I GY YG VVP + K E + LGFT +SNIL Y
Sbjct: 235 FQNEKPIDL-EMEDVIVGYMYGSTVVPYDNTIDMDYK-SGEAGLTCLGFTASSNILDEYL 292
Query: 323 M-KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEK 381
K L +A+ G + + ++AL +AM +N V + ++R+ + + L P + E+
Sbjct: 293 SGKGTYLVMAKKGCAGSEEKLTALVKAMMALNVVMMAAKIYRKDTKP-RLQTLFPIMHEQ 351
Query: 382 INIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKG-- 439
P L F +++ +FPSF QP+ +Q A D L+ ++L + +
Sbjct: 352 -RYPCLVMLE-LVFQDEINLVRFPSF--LTSKHQPSPEQYAAIDKLIDSMNLMDAVEDEH 407
Query: 440 ----EILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDS-LKKITEPDPTLLAESQSA 494
E T NP + Y + ++ H +AA P+ DS + ++ L+ +++A
Sbjct: 408 GVSHEAFGFNETHNPNHQFLYRSVVHRAMHPNAASLPVVDSDISELVSIPKKLVHRAEAA 467
Query: 495 IDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQ------AVNSMESKPV 548
+D F ++E K+ TR + + + GD + S A A++ + V
Sbjct: 468 MDEIKQVFPLEEQ---KRITRAEWLHRMAAMHQGGGDAATSSAASAPGLDAIDEESERRV 524
Query: 549 VTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYP-KAVELL 607
V +G TP +DF+ ++ R + V K M+ IF LL S ++ P + V +
Sbjct: 525 VLA--VGSTTPAEDFDPLLRRGEKFVTVAK---QMQTVIFELLFTS---MHTPVEKVIMA 576
Query: 608 VALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFD-FLMSKKLSLISKSEAVDSDITD 666
+ + +G + P ++N+ + + ++ R+ F++ ++ +KL LI SE+ S ++
Sbjct: 577 LMMYRGEAQKLGPFRYNEWMTEFKQVLLGRSKHEFWEQVIVREKLGLIDVSESDMSTVSV 636
Query: 667 DEAGSF 672
D+A F
Sbjct: 637 DDAIEF 642
>gi|315054073|ref|XP_003176411.1| Ku80 [Arthroderma gypseum CBS 118893]
gi|311338257|gb|EFQ97459.1| Ku80 [Arthroderma gypseum CBS 118893]
Length = 725
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 91/368 (24%), Positives = 168/368 (45%), Gaps = 36/368 (9%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRA 338
KGY YG V I+ ++ K + + +++++GF N R+ M + N+ +A+ N++A
Sbjct: 330 KGYEYGRTAVHITESDENITKLETKAALEIIGFIPTQNYDRYMNMSNSNVIVAQRTNNKA 389
Query: 339 TVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD--SFYFNVLPFA 396
+A+S++ RA+ E+ A+ R V + G+ ++ +L P++ PD LPFA
Sbjct: 390 IMALSSIIRALFELESYAVGRLVSKDGKSPTLI-LLAPSID-----PDYECLLEVQLPFA 443
Query: 397 EDVREFQFPSFSKF-PVSWQ--------PNEQQQEAADNLVKMLDLAPSG----KGEILQ 443
EDVR ++FP + VS + PNE + V+ ++L S + E
Sbjct: 444 EDVRCYRFPPLDRVTTVSGKVVKEHRNLPNESLLAVMEKYVESMELVGSNDESDQAESFA 503
Query: 444 PELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFC-GQF 502
E +P L R + ++ H P + + L+K++ L +S+ ++
Sbjct: 504 LEDCYSPLLHRIDQAIRWRAIHPTKLLPEVPEVLQKLSRQPEELKEKSKPVLEQLIKASD 563
Query: 503 VIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQD 562
V K PK+K R +KP S D A+ E + KI I +
Sbjct: 564 VKKVPPKMKGRKRNRDADKPL---------SGLDVDALLQGEKR-----QKISPENAIPE 609
Query: 563 FEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQ 622
F+ ++ D + V +++ M + +++S NY +AVE L +R I +EP+
Sbjct: 610 FKQALANTDDINTVKDSVKQMCAIVENQIKHSLGDANYDRAVEYLGTMRDELISFEEPEL 669
Query: 623 FNDVLEKV 630
+ND + ++
Sbjct: 670 YNDFVREL 677
>gi|302673880|ref|XP_003026626.1| ku80-like protein [Schizophyllum commune H4-8]
gi|300100309|gb|EFI91723.1| ku80-like protein [Schizophyllum commune H4-8]
Length = 838
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 126/570 (22%), Positives = 234/570 (41%), Gaps = 105/570 (18%)
Query: 31 RLIQKKLIYG--KNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKH 88
+L +++IY K + GVI+FG +ET N + + GGYE+V ++ + + L
Sbjct: 54 KLKIQEMIYNGRKTDKCGVIIFGCDETNNPVNEREGGYENVSEYIPVEQPNSSTIAKLDE 113
Query: 89 LPQGT-CAGDYM-----LIKKYGETYKGKK----HLCLITDALCPLKDPDVGTKEDQVST 138
L GD M ++ E KK + ++TD P++ D +++
Sbjct: 114 LRASEDSTGDPMDALIVAVQMQDEVLNSKKTWTRKITIVTDGESPMELEDWEATVQKINE 173
Query: 139 IARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDST------ 192
+ ++ G+ + +PH++ E N +++ +S + V T
Sbjct: 174 LGVRLAVVGIDFDSEEYGYHQENKPHVKSTNE-----NFWTQFTSLLSHGVVGTCEEALE 228
Query: 193 -TSLRGARKTRDISPVTIFR-GDLELSEK--MKIKVWVYKKTGEEKFPTLKKYS-----D 243
T+ ++T+ + + R GD++ + ++I V K T ++ + KK++ D
Sbjct: 229 DTAAPDVKETKSVLMSNVLRLGDVDNRPETALEIIVRTAKCTAMQRPKSWKKFAPRVKGD 288
Query: 244 KAPSTDK-------------------------FATHEVKVDYEYK-----------SVED 267
++ + DK +T +V +D + + +ED
Sbjct: 289 ESEAEDKPDEDMEKDDDSIRKAKQAKGEDANAASTQDVNMDADDEDGDDSDAEEVLDLED 348
Query: 268 PS------KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHY 321
P V E ++G++YG P + K +K + F N R
Sbjct: 349 PQVRATYYDEVERETLVRGFKYGTSYAPCPEGHFP--KLNTKKGIDFCAFFKRDNFRREL 406
Query: 322 YMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEK 381
M +V A+P R +A+S++ RAM + AI R V + G +GVL P K
Sbjct: 407 VMGEVQYIWADPAQPRQQIALSSIIRAMFKEKVYAIGRWVGKDGADP-KMGVLAPC---K 462
Query: 382 INIPDSFYFNVLPFAEDVREFQFPSF-----------SKFPVSWQPNEQQQEAADNLVKM 430
D + +PFA+DVR++ FPS ++ P + P E Q A D+ V
Sbjct: 463 FPDVDCLLWAPMPFADDVRKYTFPSLMNLLNKKGERVTEHP--YIPTEAQCAAMDDFVDS 520
Query: 431 LDLAPSG-------KGEILQPELTPNPALER----FYHHLELKSEHQDAAPPPLDDSLKK 479
+DL +G +G+ + NPAL R +H + + +D PPP D ++
Sbjct: 521 MDLMEAGEKDDDGKRGQWFTTIESYNPALHRTKQAMFHGAVVHNLDKDPVPPPHPDIVRF 580
Query: 480 ITEPDPTLLAESQSAIDAFCGQFVIKENPK 509
P+ +L +++ A++ + +K+ PK
Sbjct: 581 FDPPN-RVLRKARDALETAKRELKVKQVPK 609
>gi|403412940|emb|CCL99640.1| predicted protein [Fibroporia radiculosa]
Length = 842
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 112/272 (41%), Gaps = 37/272 (13%)
Query: 272 VPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIA 331
V EQ ++G++YG P ++ + K +++ GF R Y M +V A
Sbjct: 341 VEKEQLVRGFKYGSSYAPCPDGQFP--RLPTRKGIEICGFFPEKRFRREYAMSEVTYVWA 398
Query: 332 EPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN-------- 383
+P VA+SA+ +AM E AI R + R G +GVL P + EK++
Sbjct: 399 DPVQPLQQVALSAVVQAMYEKGAFAIARWIARDGADP-KMGVLVPTMFEKVDCLLWVQVC 457
Query: 384 -------IPDSFYFNVLPFAEDVREFQFPSFSKF---------PVSWQPNEQQQEAADNL 427
P+S +PFA+DVR F FPS + P E Q +A +
Sbjct: 458 RLFYAYTTPESLSIAKMPFADDVRNFAFPSLDMLINKKGEIIATHPYLPTEDQMDAMERF 517
Query: 428 VKMLDLAPSGKGE-------ILQPELTPNPALERFYH---HLELKSEHQDAAPPPLDDSL 477
V +DL +G+ + L+ NP++ R H + + PP L
Sbjct: 518 VDAMDLMEAGEKDDEGNRTPWFDTRLSYNPSIHRVKQAQFHAAVVPDLNTHPLPPTHPEL 577
Query: 478 KKITEPDPTLLAESQSAIDAFCGQFVIKENPK 509
K +P +L + AID F +KE P+
Sbjct: 578 TKYFDPPRRVLKRAHDAIDECKRVFKVKEVPR 609
>gi|157872149|ref|XP_001684623.1| putative KU80 protein [Leishmania major strain Friedlin]
gi|68127693|emb|CAJ05844.1| putative KU80 protein [Leishmania major strain Friedlin]
Length = 798
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 115/508 (22%), Positives = 209/508 (41%), Gaps = 74/508 (14%)
Query: 4 TREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELTKEV 63
++ A++L+LD++ + L + LC R++ K+IY + EV VIL GTE++ + L ++
Sbjct: 2 SKGAVVLVLDITLPRAAALVEACNLCDRILTDKMIYAPSDEVSVILAGTEKSRSALYEQS 61
Query: 64 --GGYEHVKVLQDIKVVDGHLVQSLKH-------LPQG-----TCAGDYMLIKKY----- 104
Y H+ V ++ + + LP+G + A Y I
Sbjct: 62 VQARYNHITVAAELGPATSLTLAPIAATRAGVAVLPEGETVRPSIAEAYDFIDALQVAVA 121
Query: 105 ---GETYKGKKHLCL--ITDALCPLKDPDVGTKEDQVSTI------ARQMVAFGLRMKNI 153
T + K + C+ +TDA +V KED +S I +V G + +
Sbjct: 122 VLQARTSQKKYNRCIYFLTDA-----RHEVRHKEDLLSLIDILQRDQVALVVIGFDFQAL 176
Query: 154 VVRASLSGEPHMRVII------------ENDNLLNIFSKKSSAKTLFVD-----STTSLR 196
A GE + + +N+ +L + + V ++ SL
Sbjct: 177 PAPADSQGEFNESTTVVPSAWAALDRKAQNERILAALCTELGPPSTLVSPAEALASLSLL 236
Query: 197 GARKTRD--ISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATH 254
R+ R + V + GD+ L+ ++ + T EE+ P+L++ + D T
Sbjct: 237 RCRRIRQQPVLKVALRMGDVRLATQL------FTLTQEERLPSLRRSTQD--GVDVAQTI 288
Query: 255 EVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDA 314
E V VE+ + E+R++ + G + S A+ EA++ K ++++ +GF
Sbjct: 289 EYVV---LGGVEERPCALAKEERVEAFFLGVDRISCSEADREAMRVKGPRALEAIGFVGE 345
Query: 315 SNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL 374
+ + + M + G+ +AL AM K +VR V R + + V
Sbjct: 346 AEVEPYLLMGGTRALLPLAGDHAGQRGFNALVDAMASSRKAMLVRLV-RTADAAPSLCVC 404
Query: 375 TPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLA 434
+ LPFAEDVR + FS++P Q + +++ D L+ L +
Sbjct: 405 FARTAGSSAAQRHLVLAPLPFAEDVRALR---FSEYP-ELQFSAAEEQLMDELIDGLSVD 460
Query: 435 PSGKGEILQPELTPNPALERFYHHLELK 462
S +L P T NP L+++Y L K
Sbjct: 461 DS----VLAPHDTFNPVLQQYYATLRAK 484
Score = 42.0 bits (97), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 84/167 (50%), Gaps = 21/167 (12%)
Query: 525 SDEPN-GDGSVSDAQAVNSME--------SKPVVTVDKIGDLTPIQDFEAMMSRRDCPDW 575
+DE + G + SDA +++++ S + +VD +G + I A+ +
Sbjct: 614 ADEASAGSHTASDANSISTVPHDTISGGVSFAITSVDPVGSFSMIVHHPAVTEAQ----- 668
Query: 576 VDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICR 635
++KA +D+ + I+ LL +S + Y K + ++ALR+ C+ + + +ND L K+ + R
Sbjct: 669 LNKAKDDLSDVIWELLRSSIKDAIYRKCMACIMALRQFCVTQDDAAYYNDFLLKLEVVAR 728
Query: 636 K--RNFSTFFDFLMSKK----LSLISKSEAVDSDITDDEAG-SFIVK 675
+ R+ + +++ +K + I+ E + + DD A +F+ K
Sbjct: 729 QCSRDADFWVPYVVERKDGANVWPITAQECKSAALPDDTAAKAFLQK 775
>gi|256086585|ref|XP_002579478.1| ku P80 DNA helicase [Schistosoma mansoni]
gi|353229680|emb|CCD75851.1| putative ku P80 DNA helicase [Schistosoma mansoni]
Length = 833
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 114/473 (24%), Positives = 209/473 (44%), Gaps = 65/473 (13%)
Query: 7 ALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELTKEVGGY 66
AL ++LDV M+ + + L++KK EV +IL G++ T+N L E G +
Sbjct: 4 ALGVVLDVGIHMNPNFREAVECVRLLLEKKFFAESKDEVALILCGSDATDNALADEEGSF 63
Query: 67 EHVKVLQDIKVVDGHLVQ----SLKHLPQG------TCAGDYMLIKKYGETYKGKKHLCL 116
+++ + ++ + +++ L L G D++ + + +KHL L
Sbjct: 64 QNICLAFELAPISWKVLEFLDPELLSLSTGDVVDALMVGADHLFNRCKNKKNIKEKHLLL 123
Query: 117 ITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV---------------VRASLSG 161
+++ + D DV + + + + G +K + V L
Sbjct: 124 VSNLYGSVDDSDVSRVSESLQSSGIKFSLIGCDLKKSINVTPENRDEPGPSHAVSHHLHH 183
Query: 162 EPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRG---DLELSE 218
P R I L ++ + + F D+ T+L +TR + + RG L++ +
Sbjct: 184 SPKTRPSISF--LAELWDQLNGESYDFSDAVTAL-SIFETRSV----LQRGWNVSLQIGD 236
Query: 219 KMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVE-DPSKVVPPEQR 277
+ I V Y E PT++ P T ++ +Y++ + DP + E
Sbjct: 237 SITIPVVGYTYIKEAHPPTMRIMYAPDP------TLPLRAVTKYRTQDPDPCDLNSSEV- 289
Query: 278 IKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYM-KDVNLFIAEP--- 333
+GYRYG VVP + ++K EK ++GFT A NI ++Y + V +F+A+
Sbjct: 290 TRGYRYGGTVVPFGEEDMASIKPPSEKCFSVIGFTSADNIPHNFYTGESVLVFVAQSVKQ 349
Query: 334 ------GNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNV-SEKINIPD 386
A++ALA+A+ E++ VA+VR V+ Q + +GVLTP + ++I
Sbjct: 350 SEDDVTNRPSCPTALAALAQALYEVSGVALVRRVYNQ-PSAARLGVLTPEIHGDQI---- 404
Query: 387 SFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEA---ADNLVKMLDLAPS 436
S + + F+ED+R+ + PS PVS +P+ E + N +K+ PS
Sbjct: 405 SLMYTDIAFSEDIRDLKLPS---LPVSCEPSTSTTECFVKSSNTMKLSKNCPS 454
>gi|396493633|ref|XP_003844102.1| similar to ATP-dependent DNA helicase II [Leptosphaeria maculans
JN3]
gi|312220682|emb|CBY00623.1| similar to ATP-dependent DNA helicase II [Leptosphaeria maculans
JN3]
Length = 733
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 103/420 (24%), Positives = 184/420 (43%), Gaps = 46/420 (10%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRA 338
+GY YG V IS ++ VK + E S++L+GF A R+ + + + + N +A
Sbjct: 330 RGYEYGRTAVHISESDMNCVKMETEPSLQLVGFVKAEEFERYLPLSRSSFLVPQKANPQA 389
Query: 339 TVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNV-LPFAE 397
+A+S+ A+ E AI R V ++ + V+V +L P +I + +V LPF E
Sbjct: 390 QLALSSFIHALYEAECYAIARLVTKEMKPPVMV-LLMP----RIELEWEALVDVELPFEE 444
Query: 398 DVREFQFPSFS-KFPVSWQ--------PNEQQQEAADNLVKMLDLAPSGKG------EIL 442
D+R ++FP K VS + P E A + V +DL+ G+ E
Sbjct: 445 DMRRYKFPPLDRKLTVSGKVITEHKDLPTEDLVNAMSDYVDAMDLSTFGRDEDGNEEEYA 504
Query: 443 QPELTPNPALERFYHHLELKSEHQDAAPPPLD--DSLKKITEPDPTLLAESQSAIDAFCG 500
+ E T P + R H + ++ H D A P D + L K + P P L+A+ QS +
Sbjct: 505 KIEDTYAPIVHRINHVIRWRATHPDPAQPIPDPPEILLKYSTPPPALIAQYQSTLTVLQK 564
Query: 501 QFVIKENP---KLKKSTRRFLREKP-SGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGD 556
+K+ P K + +R R+KP SG D V+++ P +
Sbjct: 565 AADVKKVPPKVKGRGKRQRTERDKPISGLD-------------VDALLGNPKRVKIDPAN 611
Query: 557 LTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCIL 616
L P F+ ++ D + +A + + +I L+ +S Y +A+E + +R
Sbjct: 612 LVP--SFKQALAATDDLAAIQEATDGIAAEIRKLVTSSVGDNAYGRALEAIRVMRDELTE 669
Query: 617 EQEPKQFNDVL----EKVCKICRKRNFSTFFDFLMSKKLSLISKSEAVDSDITDDEAGSF 672
+EP +N + E + N + + + L+ ++ S+++++EA F
Sbjct: 670 LEEPDMYNGFIRGLKEDLLAGRLGGNRKEMWWKIRGSRYGLVDVRRSLVSEVSEEEAARF 729
>gi|322702143|gb|EFY93891.1| Ku70/Ku80 domain & Ku-core domain containing protein [Metarhizium
acridum CQMa 102]
Length = 646
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 119/487 (24%), Positives = 203/487 (41%), Gaps = 62/487 (12%)
Query: 5 REALLLLLDVSPSM---HSVLPDVE---KLCSRLIQKKLIYGKNHE---VGVILFGTEET 55
+EA + +LD+ SM HS + + +C + I N + VGV+ T+ET
Sbjct: 4 KEATVFILDLGASMAQKHSGREESDLDWSMCYVWDKITDIVAANRKTLCVGVVGLRTDET 63
Query: 56 ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGDYM--------LIKKYG 105
N+L +E GYE++ V+Q++ + +++L+ P T +GD + LI +
Sbjct: 64 NNKL-QEDDGYENISVIQELSQITMSGLRALQASVKPSETMSGDAVSAIVVAVDLIDTFT 122
Query: 106 ETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHM 165
+ K + + L+TD + + +++ ++ G+ N +P
Sbjct: 123 KKLKWVRKIVLVTDGQGEMDADGIEDIAKKINDSGIKLTVLGVDFDNPQYGFKEEDKPPT 182
Query: 166 RVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSE------K 219
+ E K ++ L R + + P + G L L +
Sbjct: 183 KAASEKTLKALTDQCKGGIFATMAEAIDELDTPR-VKSVKPYKTYDGALTLGDPEKFPAA 241
Query: 220 MKIKVWVYKKT--------------GEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSV 265
M I V Y KT E+ + + D A +F+ VK YK V
Sbjct: 242 MNINVERYFKTHLARPLTASTVVVKSEQATQSTQTVEDDAMDGIEFSA--VKQARTYK-V 298
Query: 266 EDPS-----KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRH 320
DP + V E KGY YG V IS +E K + EKS ++GF S
Sbjct: 299 NDPDAPGGKRDVEFESLAKGYEYGRTAVHISESEHNITKLETEKSFSIVGFIPWSKYEPF 358
Query: 321 YYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSE 380
M +V + A + ++ +A+S+L A+ E+ A+ R V + G+ ++V ++ P +
Sbjct: 359 LNMGEVCVTHARKNDIKSELALSSLIWALLELESYAVARIVTKDGKDPLLV-LMAPQLEL 417
Query: 381 KINIPDSFYFNVLPFAEDVREFQFPSFSK-FPVSWQ--------PNEQQQEAADNLVKML 431
+ + Y LPFAEDVR +QFP + VS Q P+++ EA + V +
Sbjct: 418 GL---ECLYDIPLPFAEDVRTYQFPPLDRVITVSGQTLKKHRLLPSDELAEAMSDYVDAM 474
Query: 432 DLAPSGK 438
DLA G+
Sbjct: 475 DLATYGQ 481
>gi|426201921|gb|EKV51844.1| hypothetical protein AGABI2DRAFT_148177 [Agaricus bisporus var.
bisporus H97]
Length = 844
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 117/254 (46%), Gaps = 25/254 (9%)
Query: 275 EQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 334
E+ ++G++YG VP ++ ++ +K + + GF S R M ++ AEP
Sbjct: 346 EELVRGFKYGSTYVPCPDGQF--LRLPTKKGIDICGFFPVSKFPRELSMGEIQYIWAEPT 403
Query: 335 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLP 394
+ + VA+S++ +AM+E VAI R V R +GVL P E++ + F + +P
Sbjct: 404 DPQQQVALSSMVQAMREKECVAIARWVSRDDMDP-KMGVLYPEAFERV---ECFLWAQMP 459
Query: 395 FAEDVREFQFPSFSKF---------PVSWQPNEQQQEAADNLVKMLDLAPSGKGE----- 440
FA+D+R++ F S K + P E QQ A D+ V LDL +G+ +
Sbjct: 460 FADDIRKYGFASLDKLISKNGEEIKSHPYIPTESQQNAMDDFVDALDLMNAGEKDEEGNR 519
Query: 441 --ILQPELTPNPALERFYH---HLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAI 495
P + NPAL R H + ++ PP L K +P LL ++ AI
Sbjct: 520 TPWFNPAESYNPALHRTKQAMFHCAVVTDIASNPLPPPHPELLKYFDPPKKLLKRAKPAI 579
Query: 496 DAFCGQFVIKENPK 509
F +KE PK
Sbjct: 580 VQAQEAFKVKEIPK 593
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 12/104 (11%)
Query: 33 IQKKLIYG-KNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ 91
IQ+ + G K + GV+ FG++ T N + + GGYE+V+ + I +L+ L L
Sbjct: 55 IQEMIFNGRKTDQCGVVTFGSQVTSNIINERNGGYENVEEVFSIAQPTANLLSKLDSLST 114
Query: 92 GTCAGDYM-----LIKKYGETYKGKK-----HLCLITDALCPLK 125
GD M I+ E Y GKK + L+T+ CP +
Sbjct: 115 SNVKGDAMDGLIVAIQTQAE-YLGKKKSWTRKIVLLTNGECPFE 157
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 55/109 (50%), Gaps = 6/109 (5%)
Query: 554 IGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKG 613
IG P++DF+ + + D V KA+ED++ I ++ + + ++ L ALR
Sbjct: 720 IGTTFPLKDFKKNLEQGDV---VSKAVEDLREVIVEVVMRPFASKRHEEMIDCLRALRDT 776
Query: 614 CILEQEPKQFNDVLEKVCKICRKRNFSTFFDFL---MSKKLSLISKSEA 659
C+ E E +N L ++ + C ++N + F + + +SLIS EA
Sbjct: 777 CLKEDEIDAWNAFLPRLKEDCLRKNGNPEFWMQVKDLGRDISLISNKEA 825
>gi|390603931|gb|EIN13322.1| ku80-like protein [Punctularia strigosozonata HHB-11173 SS5]
Length = 864
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 122/275 (44%), Gaps = 25/275 (9%)
Query: 272 VPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIA 331
V E ++G++YG VP + + + K + + GF A N R M +V A
Sbjct: 352 VEKEDLVRGFKYGATYVPCPEGAFP--RLETRKGIDICGFFKAKNFRRELAMGEVYYVWA 409
Query: 332 EPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFN 391
+P +A+S++A+AM+E +AI R V R G +GVL P+V EKI D +
Sbjct: 410 DPAVPAQQIALSSIAQAMEEKGVMAIARWVSRDGMDP-KMGVLAPSVFEKI---DCLLWV 465
Query: 392 VLPFAEDVREFQFPSFSKF---------PVSWQPNEQQQEAADNLVKMLDLAPSGKGE-- 440
+PFA+DVR++ F S ++ P +QQ+A D V +DL +G+ +
Sbjct: 466 QMPFADDVRKYTFASLDTLINKNGEVVEEHAYLPTPEQQDAMDAFVDAMDLMEAGEKDEE 525
Query: 441 -----ILQPELTPNPALERFYHHLELKSEHQD---AAPPPLDDSLKKITEPDPTLLAESQ 492
L+ NPA+ R L + QD PP L K EP +L +
Sbjct: 526 GNRYPWYDTRLSYNPAIHRTKQALFHSAVAQDLNSNPLPPPHPELLKYFEPPKKVLKRAA 585
Query: 493 SAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDE 527
AI+ F ++E PK R+ + DE
Sbjct: 586 PAIEHAKAAFKVREVPKRVAKGRQDGHRRARDEDE 620
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 72/171 (42%), Gaps = 31/171 (18%)
Query: 9 LLLLDVSPSMHSVL-------PDVEKLCSRL-------------IQKKLIYG-KNHEVGV 47
+ L+D+SPSM + P E+ + + IQ+ + +G K + GV
Sbjct: 12 MFLVDISPSMGKLREVELPPGPKGERRTTEVTNLEWGLQFVKLKIQEMIFHGRKTEQCGV 71
Query: 48 ILFGTEETENELTKEV-GGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDYMLIKKYG- 105
ILFGTEET N + ++ GYEHV I + + L L +GD + G
Sbjct: 72 ILFGTEETHNLVHDQMKSGYEHVSEYIPISQPNAGTLAKLSKLQPSEVSGDPIDALIVGL 131
Query: 106 ---ETYKGKK-----HLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGL 148
Y GKK + L+TD P++ D +++ I + G+
Sbjct: 132 EAQAQYLGKKKTWTRKIVLLTDGESPMEIEDWEATVRKMNDIGVSLTIVGI 182
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 62/128 (48%), Gaps = 11/128 (8%)
Query: 554 IGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKG 613
+G P++DF+ ++R D V KA+ED+ I ++ G + V+ + A+R
Sbjct: 738 VGMTYPLEDFKKNIARGDV---VTKAVEDLAAVIMEIVMRPFSGRRRMEMVDCMRAMRDT 794
Query: 614 CILEQEPKQFNDVLEKVCKICRKRNFST--FFDFLM--SKKLSLISKSEAVD----SDIT 665
C+ E E +N L + C ++ F+ + ++LSLIS EA S ++
Sbjct: 795 CLKEDEIDAWNQFLRNLKDQCISQSPGNREFWSSVAEEGRELSLISDKEAKQHGGRSSVS 854
Query: 666 DDEAGSFI 673
+ EA +F+
Sbjct: 855 EKEATNFM 862
>gi|430811714|emb|CCJ30847.1| unnamed protein product [Pneumocystis jirovecii]
Length = 577
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 122/516 (23%), Positives = 222/516 (43%), Gaps = 67/516 (12%)
Query: 33 IQKKLIYG-KNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKH--L 89
I K+ G K VGVI F T ET N++ + Y+++ VL I+ + ++ LK +
Sbjct: 58 ISSKIFSGRKTDYVGVIGFKTNETNNDMEDD-EFYKNISVLCPIQQITIKQIKELKKQLV 116
Query: 90 PQGT-----CAGDYMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMV 144
P T LI KY K K+L LIT+ + + D QV ++ +
Sbjct: 117 PSNTNIGDGIIIGIDLISKYCGNLKYIKNLILITNGMSYMDFSDSEKIAYQVKHMSINIS 176
Query: 145 AFGLRMKNIVVRASLSGEPHMRVIIENDN---LLNIFSKKSSAKTLFVDSTTSLRGARKT 201
FG+ + S + + II+ +N LL + + ++ SL +
Sbjct: 177 IFGIDFDS----YSYGYKEDFKSIIKMNNEKELLKFANICNGTFASMIEVINSLNTSN-F 231
Query: 202 RDISPVTIFRGDLELSEK------MKIKVWVYKKTGEEKFPT------LKK------YSD 243
R + PV++F G L + + ++I + Y +T K P+ LKK Y++
Sbjct: 232 RKVHPVSLFNGTLTIGDPQNYPDVVEIMIQRYPRTRLAKMPSAHRYNVLKKSPKPTNYTE 291
Query: 244 KAPSTDKFATHEVKVDY--------EYKSVEDPS-KVVPPEQRIKGYRYGPQVVPISSAE 294
+ T + ++ K +Y YK E+ S K + E GY YG ++P +S
Sbjct: 292 QLAQTSTNSNNDNKNEYFSEILTTKNYKIEENGSEKEISKEDLELGYVYGKTIIP-TSII 350
Query: 295 WEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNK 354
+ +K+K + +LGF + R + + N+ + N + +++S+L M + N
Sbjct: 351 VDELKYKTNIQLTILGFIKNKSFPRFMAIGESNIIVPAKTNLNSKISLSSLIHGMLKTNT 410
Query: 355 VAIVRCVWRQGQQSVVVGVLTPNVSEK----INIPDSFYFNVLPFAEDVREFQFPSFSKF 410
+A+ + V + + ++ ++ P++ + I +P LPFAED R F+FPS K+
Sbjct: 411 LALAKIVTKTDKCPEMI-MIAPSIENEFECLIELP-------LPFAEDCRNFKFPSMKKY 462
Query: 411 PVSWQPNEQQQEAADNL----VKMLDLAPS------GKGEILQPELTPNPALERFYHHLE 460
+S E D+L V +DL+ + K +L+ + N A+ R +
Sbjct: 463 QISNIETNSSIENIDSLMEKYVTKMDLSNTVSDTYIQKTNLLESKYIHNMAIYRLNQAIS 522
Query: 461 LKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAID 496
+ + ++ P L +K P LL + I+
Sbjct: 523 HNAIYPNSELPNLLPKIKHFMYPSINLLKTCEEEIE 558
>gi|326477795|gb|EGE01805.1| Ku family DNA helicase [Trichophyton equinum CBS 127.97]
Length = 714
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 94/411 (22%), Positives = 175/411 (42%), Gaps = 50/411 (12%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRA 338
KGY YG V I+ + K + + +++++GF N R+ M + N+ IA+ N++A
Sbjct: 333 KGYEYGRTAVHITDSMENITKLETKAALEIVGFIPIENYDRYMNMSNANVIIAQRTNNKA 392
Query: 339 TVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD--SFYFNVLPFA 396
+A+S++ A+ E+ A+ R V + G+ +V +L P++ PD LPFA
Sbjct: 393 IIALSSIIHALHEVESYAVGRLVTKDGKSPTLV-LLAPSID-----PDYECLLEVQLPFA 446
Query: 397 EDVREFQFPSFSKFPVSWQ---------PNEQQQEAADNLVKMLDLAPSGKGEILQPELT 447
EDVR ++FP + P+E A + V+ ++L
Sbjct: 447 EDVRCYRFPPLDRVTTMSGKVVKEHRNLPDENLLAAMEKYVENMELV------------- 493
Query: 448 PNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFC-GQFVIKE 506
P E + ++ H P + + L+ + L+ +S+SA++ V K
Sbjct: 494 -QPGEEGVDQAIRWRATHPTKPLPSIPEILQNQSRQPEELMEQSKSALEQLIKASDVKKV 552
Query: 507 NPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAM 566
PK+K R + +KP S D A+ E + +I I +F+
Sbjct: 553 PPKVKGRKRNRITDKPL---------SGLDVDALLQGEKR-----QRISPENAIPEFKQA 598
Query: 567 MSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDV 626
++ D + V ++++ M I +++S NY + VE L +R I +EP +ND
Sbjct: 599 LASTDDINTVKESVKQMCAIIENQIKHSLGDANYDRVVEYLGTMRDELISFEEPDLYNDF 658
Query: 627 LEKVCKICRKRNFS----TFFDFLMSKKLSLISKSEAVDSDITDDEAGSFI 673
+ ++ + + + K++ LI S +T+ EA F+
Sbjct: 659 VRELKRKLLDDKLGEDRRELWWLIRKKRIGLIDDKLVEISKVTEQEAKEFL 709
>gi|409083028|gb|EKM83385.1| hypothetical protein AGABI1DRAFT_96384 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 862
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 117/254 (46%), Gaps = 25/254 (9%)
Query: 275 EQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 334
E+ ++G++YG VP ++ ++ +K + + GF S R M ++ AEP
Sbjct: 364 EELVRGFKYGSTYVPCPDGQF--LRLPTKKGIDICGFFPVSKFPRELSMGEIQYIWAEPT 421
Query: 335 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLP 394
+ + VA+S++ +AM+E VAI R V R +GVL P E++ + F + +P
Sbjct: 422 DPQQQVALSSMVQAMREKECVAIARWVSRDDMDP-KMGVLYPEAFERV---ECFLWAQMP 477
Query: 395 FAEDVREFQFPSFSKF---------PVSWQPNEQQQEAADNLVKMLDLAPSGKGE----- 440
FA+D+R++ F S K + P E QQ A D+ V LDL +G+ +
Sbjct: 478 FADDIRKYGFASLDKLISKNGEEIKSHPYIPTESQQNAMDDFVDALDLMNAGEKDEEGNR 537
Query: 441 --ILQPELTPNPALERFYH---HLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAI 495
P + NPAL R H + ++ PP L K +P LL ++ AI
Sbjct: 538 TPWFNPAESYNPALHRTKQAMFHCAVVTDIASNPLPPPHPELLKYFDPPKKLLKRAKPAI 597
Query: 496 DAFCGQFVIKENPK 509
F +KE PK
Sbjct: 598 VQAQEVFRVKEIPK 611
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 12/104 (11%)
Query: 33 IQKKLIYG-KNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ 91
IQ+ + G K + GV+ FG++ T N + + GGYE+V+ + I +L+ L L
Sbjct: 55 IQEMIFNGRKTDQCGVVTFGSQVTSNIINERNGGYENVEEVFSIAQPTANLLSKLDSLSP 114
Query: 92 GTCAGDYM-----LIKKYGETYKGKK-----HLCLITDALCPLK 125
GD M I+ E Y GKK + L+T+ CP +
Sbjct: 115 SNVKGDAMDGLIVAIQTQAE-YLGKKKSWTRKIVLLTNGECPFE 157
Score = 42.4 bits (98), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 54/109 (49%), Gaps = 6/109 (5%)
Query: 554 IGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKG 613
IG P++DF + + D V KA+ED++ I ++ + + ++ L ALR
Sbjct: 738 IGTTFPLKDFGKNLEQGDV---VSKAVEDLREVIVEVVMRPFASKRHEEMIDCLRALRDT 794
Query: 614 CILEQEPKQFNDVLEKVCKICRKRNFSTFFDFL---MSKKLSLISKSEA 659
C+ E E +N L ++ + C ++N + F + + +SLIS EA
Sbjct: 795 CLKEDEIDAWNAFLPRLKEDCLRKNGNPEFWMQVKDLGRDISLISNKEA 843
>gi|392572067|gb|EIW65239.1| SPOC domain-like protein [Trametes versicolor FP-101664 SS1]
Length = 676
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 125/279 (44%), Gaps = 28/279 (10%)
Query: 252 ATHEVKVDYEYKSVEDPSKV-VPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLG 310
A +V+ D E ++ D V V E+ ++GY+YG P + +P + + G
Sbjct: 162 AHGDVEDDAETQAERDKRLVKVEKEELVRGYKYGASFAPAPEEGFPKFPVRP--GMDICG 219
Query: 311 FTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVV 370
F R M +V A+P + VA+S++ AM E + VAI R V + +
Sbjct: 220 FFPQERFRREMAMGEVYYVWADPASPMQQVALSSIVNAMNETHVVAITRWV-KTEKGEPK 278
Query: 371 VGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVS---------WQPNEQQQ 421
+GVL P V E+I D F + +PFA+D+R F F S + P +Q
Sbjct: 279 MGVLWPTVFEEI---DCFLWVQMPFADDIRNFTFASLENLITKKGEVVKEHPYLPTNEQM 335
Query: 422 EAADNLVKMLDLAPSGKGE-------ILQPELTPNPALERF----YHHLELKSEHQDAAP 470
+A + V +DL +G+ + L+ NPA+ R +H +K + P
Sbjct: 336 DAMEKFVDAMDLMDAGEKDEDGNRMPWFDTTLSYNPAIHRMKQAQFHAAIVKDLNTHPLP 395
Query: 471 PPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPK 509
PP ++ LK EP +L ++ AI+ F ++E PK
Sbjct: 396 PPHEELLKYF-EPPRRVLKRAREAIEECKTTFNVREAPK 433
>gi|326474806|gb|EGD98815.1| hypothetical protein TESG_06180 [Trichophyton tonsurans CBS 112818]
Length = 767
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 87/389 (22%), Positives = 173/389 (44%), Gaps = 47/389 (12%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRA 338
KGY YG V I+ + K + + +++++GF N R+ M + N+ IA+ N++A
Sbjct: 329 KGYEYGRTAVHITDSMENITKLETKAALEIVGFIPIENYDRYMNMSNANVIIAQRTNNKA 388
Query: 339 TVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD--SFYFNVLPFA 396
+A+S++ A+ E+ A+ R V + G+ +V +L P++ PD LPFA
Sbjct: 389 IIALSSIIHALHEVESYAVGRLVTKDGKSPTLV-LLAPSID-----PDYECLLEVQLPFA 442
Query: 397 EDVREFQFPSFSKFPVSWQ---------PNEQQQEAADNLVKMLDLA-PSGKGEILQP-- 444
EDVR ++FP + P+E A + V+ ++L P +G+ ++
Sbjct: 443 EDVRCYRFPPLDRVTTMSGKVVKEHRNLPDENLLAAMEKYVENMELVQPGEEGDQVESFA 502
Query: 445 -ELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFV 503
+ +P L R + ++ H P + + L+ + L+ +S+SA++ Q +
Sbjct: 503 LQDCYSPLLHRVDQAIRWRATHPTKPLPSIPEILQNQSRQPEELMEQSKSALE----QLI 558
Query: 504 IKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAV-----------NSMESKPVVTVD 552
+ K K ++ + + G+ P + A+ N + KP+ +D
Sbjct: 559 KASDVKKGKLKPQYPKRRTRGALIPPHHHHICLLTAIVVPPKVKGRKRNRITDKPLSGLD 618
Query: 553 -----------KIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYP 601
+I I +F+ ++ D + V ++++ M I +++S NY
Sbjct: 619 VDALLQGEKRQRISPENAIPEFKQALASTDDINTVKESVKQMCAIIENQIKHSLGDANYD 678
Query: 602 KAVELLVALRKGCILEQEPKQFNDVLEKV 630
+ VE L +R I +EP +ND + ++
Sbjct: 679 RVVEYLGTMRDELISFEEPDLYNDFVREL 707
>gi|170084899|ref|XP_001873673.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164651225|gb|EDR15465.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 628
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 117/256 (45%), Gaps = 29/256 (11%)
Query: 275 EQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 334
E+ ++G++YG VP ++ K K + + GF N R M ++ A+P
Sbjct: 150 EELVRGFKYGTTYVPCPEGQFP--KLPTRKGIDICGFFYTKNFRRELSMGEIQYVWADPS 207
Query: 335 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLP 394
+ + VA+S++ +AM E +AI R V + G +GVL P +K+ D ++ +P
Sbjct: 208 SPQQQVAISSIVQAMYEKEVMAIARWVTKDGMDP-KMGVLWPTRFDKV---DCLLWSHMP 263
Query: 395 FAEDVREFQFPSFSKFPVS----------WQPNEQQQEAADNLVKMLDLAPSGKGE---- 440
FA+DVR++ F S + VS + P + Q A D V +DL +G+ +
Sbjct: 264 FADDVRKYTFASLDQL-VSKKGEAIKEHPYIPTKAQITAMDEFVDAMDLMDAGEKDEEGS 322
Query: 441 ---ILQPELTPNPALER----FYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQS 493
L+ NPA+ R +H + + PPP D L K EP +L ++
Sbjct: 323 RLPWFDTLLSYNPAVHRTKQAIFHSAVVSDIETNPLPPPHPD-LVKYFEPPKRVLKRARG 381
Query: 494 AIDAFCGQFVIKENPK 509
++ F +K+ PK
Sbjct: 382 PLEECKSAFKVKQVPK 397
>gi|299755185|ref|XP_001828487.2| Ku80 [Coprinopsis cinerea okayama7#130]
gi|298411107|gb|EAU93320.2| Ku80 [Coprinopsis cinerea okayama7#130]
Length = 855
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 136/570 (23%), Positives = 224/570 (39%), Gaps = 114/570 (20%)
Query: 33 IQKKLIYG-KNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ 91
+Q+ + +G K + GV LFG+E T N + K+ GGY+H++ I + + + +
Sbjct: 56 VQEMIFHGRKTDQCGVYLFGSEVTNNLVNKKQGGYDHIQEYIKIGTPNIGTLAKIDEITT 115
Query: 92 GTCAGDYMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMK 151
+GD + +T+ K + LITD P++ D I M+ +R+
Sbjct: 116 SDLSGD-----RNKKTWTRK--IFLITDGERPIEIED-------WQDIVNSMLTNDVRL- 160
Query: 152 NIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTL--FVDSTTS--------------L 195
VV E V E F KK++ FVD+ +
Sbjct: 161 -TVVGIDFDDEEGGYVYPEKS-----FHKKANEDFFKEFVDAMGDNGVLGTLEFALQEVV 214
Query: 196 RGARKTRDISPV-TIFR---GDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKF 251
R K +PV T+ R D + E M I V K T + +LKKY+ + + +
Sbjct: 215 RPEPKQVKSTPVPTVLRIGDPDYKPDEAMTITVRATKCTALVRPASLKKYALREITEEDM 274
Query: 252 ATHE----------VKVDYEY------------------------------------KSV 265
A E +K+ EY K+
Sbjct: 275 AVDEDEERKAIFKQLKMRTEYYVDRNAGGDDEDENVKMEDDEDEGLLLEGSAGPVEKKNK 334
Query: 266 EDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKD 325
E+ + + E+ +KG++YG P ++ K + K + ++GF + N R M +
Sbjct: 335 EENWERIEKEELVKGFKYGTTYAPCPDGQFP--KLQTVKGIDIMGFFPSKNFRRELSMGE 392
Query: 326 VNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIP 385
V +I N+ +A+S+L +AM K AI R V R +GVL P V + I
Sbjct: 393 VT-YIWPGTNAPDQLALSSLIQAMYNSQKYAIARWVLRDNSDP-KMGVLAPCVWDNI--- 447
Query: 386 DSFYFNVLPFAEDVREFQFPSFSKF---------PVSWQPNEQQQEAADNLVKMLDLAPS 436
D + +PFA+DVR++ F S + P ++QQEA DN V ++L +
Sbjct: 448 DCLLWVRMPFADDVRKYVFGSLDTLVNKKGEVVEEHPYLPTQEQQEAMDNWVDKMELGDA 507
Query: 437 GKGE-------ILQPELTPNPALERFYH---HLELKSEHQDAAPPPLDDSLKKITEPDPT 486
G + + NPA+ R H + S+ PP L EP
Sbjct: 508 GDKDEEGNRMPWFDTSSSFNPAVHRIKQAIFHSAVVSDVTTDPLPPPHPELLTYFEPPKR 567
Query: 487 LLAESQSAIDAFCGQFVIKENPKLKKSTRR 516
+L S+ A++ F +KE PK +++
Sbjct: 568 VLKRSRDALEECKKVFAVKEVPKRTAKSKK 597
>gi|307187343|gb|EFN72471.1| ATP-dependent DNA helicase 2 subunit 2 [Camponotus floridanus]
Length = 576
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 122/563 (21%), Positives = 239/563 (42%), Gaps = 66/563 (11%)
Query: 3 RTREALLLLLDVSPSMH-----SVLPDVEK-LCSRLIQKKLIYGKNHEVGVILFGTEETE 56
+ +E+++ L+ + H S+L D K + +IQ+K+ E+GVIL G +
Sbjct: 5 KLKESIIFLVKIGIVRHGTQSNSMLLDKAKFILKHIIQRKIFLCPKDEIGVILMGCD--- 61
Query: 57 NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDYMLIKKYGETYKGKKHLCL 116
N + + E+++ L ++V + +L++S++ L T +Y ++ + H C+
Sbjct: 62 NSKSNSITELENIQELCRVQVGNWNLIESIEKL--QTTNQNYSWMEAIYAAIEYINHECV 119
Query: 117 ITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLN 176
+ D +ED VS +A +LS E + I +L N
Sbjct: 120 DKSERKIILLSDFNEEEDVVSQFQMDDIA-----------KTLSSEEISLIAIGERDLDN 168
Query: 177 I-FSKKSSAKTLFVDSTTSLRGARKT--RDISPVTIFR----------GDLELSEKMKIK 223
I +++++ L + + G T R +S V ++ +EL
Sbjct: 169 IDKDSQTASEGLLMSVLREIGGQYLTFERAMSDVCFYKRPSTKPMPWYCQMELGNFHIPI 228
Query: 224 VWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRY 283
+ K E K P + ST EV + + ++ + E I+GY Y
Sbjct: 229 AAISKIPTEVKLPKMILMG--KTSTPDMPEQEVPIKNIAQWTDNNRTIHTEEDIIRGYVY 286
Query: 284 GPQVVPISSAEWEAVKFKP-EKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAV 342
G + +P+S + + K EK K+ GFT NI Y++ D ++ P N +
Sbjct: 287 GGKSIPVSDETEKTMTPKTNEKCYKIHGFTAKENIPMEYWLSD-GTYVIVPANESVSAPF 345
Query: 343 SALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNV---LPFAEDV 399
+L +AM + N +AIV V+R ++ +V + I++P+ + + LPF D
Sbjct: 346 YSLVQAMVDKNVIAIVEKVYRANTEANMVALFP-----SIDVPNEPWCLIEIGLPFERD- 399
Query: 400 REFQFPSFSKFPVSW---QPNEQQQEAADNLVKMLDLAPSGKGEILQ------PELTPNP 450
+ + ++ P+ + Q +++Q +A D+L+ L+L + + + P P+P
Sbjct: 400 ----YGAIAQRPLKFVMKQLSKEQNDAIDDLLTSLELPEAVDDDAIDINEKYLPGYMPDP 455
Query: 451 ALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVI--KENP 508
+ + L ++ D PP+ D +K + E + + + + F + K++P
Sbjct: 456 GTQHMWDMLAARALKPDKPLPPIADDVKNLLEQPEFMKEKCKPVTERIKNLFSLEKKQSP 515
Query: 509 KLKKSTRRFLREKPSGSDEPNGD 531
+K RR +EK + + NGD
Sbjct: 516 NTRK--RRKSKEKDNEQSD-NGD 535
>gi|451847146|gb|EMD60454.1| hypothetical protein COCSADRAFT_193151 [Cochliobolus sativus
ND90Pr]
Length = 733
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 108/456 (23%), Positives = 198/456 (43%), Gaps = 53/456 (11%)
Query: 247 STDKFATHEVKVDYEYKSVEDPS--KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEK 304
+TD A +V Y+ +S +P K V ++ +GY YG V IS ++ VK + ++
Sbjct: 298 ATDLSAVRNQRV-YQVESQTEPGIKKNVEMDELERGYEYGSTAVHISESDMNVVKLETQQ 356
Query: 305 SVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQ 364
+++L+GF A + R+ + N + + N A + +S+ A+ E + A+ R V +
Sbjct: 357 AMELVGFVRAEDFERYLPLSRTNFIVPQKANQPAQLGLSSFIHALYEADCYAVARLVAKD 416
Query: 365 GQQSVVVGV---LTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFS-KFPVSWQ----- 415
+ V++ + + P +++ LPF ED+R ++FP K VS +
Sbjct: 417 LKPPVLLLLVPRIEPEWEALVDVE-------LPFEEDMRRYKFPPLDRKLTVSGKVITEH 469
Query: 416 ---PNEQQQEAADNLVKMLDLAPSGK------GEILQPELTPNPALERFYHHLELKSEHQ 466
P + +A + V +DL+ G+ E +PE T +P + R + ++ H
Sbjct: 470 KDLPTKNLVDAVSDYVDAMDLSTFGRDEDGNEDEYAKPEDTFSPLVHRINQVIRWRATHP 529
Query: 467 DAAPPPLD--DSLKKITEPDPTLLAESQSAIDAFCGQFVIKENP---KLKKSTRRFLREK 521
D + P D + L K + P L+ +Q ++A +K+ P K + +R R+K
Sbjct: 530 DPSLPIPDPPEILIKYSMPPADLVVSAQKQLNAVKQAAELKKVPPKVKGRGKRQRTERDK 589
Query: 522 P-SGSDEPNGDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAI 580
P SG D V+ + P KI I F+ +S D D + A
Sbjct: 590 PLSGLD-------------VDQLLGNPKRV--KIESKNLIPSFKQALSASDDLDAIQDAA 634
Query: 581 EDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVL----EKVCKICRK 636
+ + +I L+ NS Y +A+E + +R+ +EP+ +N + E +
Sbjct: 635 DGIAKEIRSLISNSVGDNAYQRALEAIRVMREELTELEEPEIYNAFIKQLKEDILGGKLN 694
Query: 637 RNFSTFFDFLMSKKLSLISKSEAVDSDITDDEAGSF 672
N + + + LI + S +T+DEA F
Sbjct: 695 GNRREMWWRIRGNRYGLIDSKRSYVSPVTEDEAKRF 730
>gi|412992252|emb|CCO19965.1| predicted protein [Bathycoccus prasinos]
Length = 745
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 108/231 (46%), Gaps = 41/231 (17%)
Query: 198 ARKTRDISPVTIFRGDLELSE-----KMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFA 252
R R +P T FRG+L + + I +W YK+T E T+K Y F
Sbjct: 261 GRLMRTKTPTTTFRGNLSFGKLGKESYLSIPIWAYKQTMEATAETMKPYG-------AFE 313
Query: 253 THEVKVDYEYKSVEDPSKV----VPPEQRIKGYRYGPQVVPI-SSAEWEAVKFKPEKSVK 307
++ D +YK++ SK+ +P EQR++ Y+YG Q +P+ S E + K +K V+
Sbjct: 314 GQDLLRDVQYKNI---SKIDGDEIPAEQRVRCYKYGKQSIPMDESVERQFGAEKMKKGVE 370
Query: 308 LLGFTDASNILRHYYMKDVNLFIAEPGNS-------------RATVAVSALARAMKEMNK 354
++G D + ++ +F A P + +A A+SA ARA+ + K
Sbjct: 371 IIGTVDLKYVPFWLTTEEPMMFCAWPELTEDEKAGIHTDEYQKACQALSAFARALDKKGK 430
Query: 355 VAIVRCVWRQGQQSVVVGVLTPNVSEKINIP--DSFYFNVLPFAEDVREFQ 403
A+ R +R+G + G LTP +P D F+ LP+AED R Q
Sbjct: 431 CALCRACFREG-SGIHFGALTPKF-----LPEGDFLLFSPLPYAEDWRADQ 475
>gi|115386128|ref|XP_001209605.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114190603|gb|EAU32303.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 713
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 104/423 (24%), Positives = 178/423 (42%), Gaps = 64/423 (15%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRA 338
KGY YG V I + + + ++L+GF +N R N +A
Sbjct: 324 KGYEYGRTAVHIDTTDENITTLETFAGLELIGFI--ANDQR--------------ANDKA 367
Query: 339 TVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD--SFYFNVLPFA 396
T+A+S+ A+ E+ A+ R V ++ + +VV +L P++ PD LPFA
Sbjct: 368 TLALSSFIHALFELECYAVARLVTKENKPPIVV-LLAPSIE-----PDYECLLEVQLPFA 421
Query: 397 EDVREFQFPSFSK-FPVSWQ--------PNEQQQEAADNLVKMLDLAPSGKG-------- 439
EDVR ++FP K VS + P++ +A V ++L + +
Sbjct: 422 EDVRTYRFPPLDKVITVSGKVVTQHRNLPSDDLLDAMSKYVNSMELVNTDEDGSPGVDEN 481
Query: 440 ----EILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAI 495
E L E + +P L R + ++ H + PP + L K + P L+ +S+ +
Sbjct: 482 SDPIEGLPIEDSFSPVLHRINAAIRSRAIHPNEPIPPPSERLTKFSHPPDELVEKSKKYL 541
Query: 496 DAFCGQFVIKE-NPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNSMESKPVVTVDKI 554
+ +K+ PK K R EKP S D A+ E + +T +
Sbjct: 542 EKLMEVAEVKKVPPKTKGRKRTREAEKPL---------SGLDVDALLHQEKRTKITPN-- 590
Query: 555 GDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGC 614
I +F+ +S+ + D + A+ M I ++NS NY + +E L R
Sbjct: 591 ---NAIPEFKQAVSQAENIDAIKNAVTQMTTIIEDQIKNSLGDANYDRVIEGLGVTRDEL 647
Query: 615 ILEQEPKQFNDVL----EKVCKICRKRNFSTFFDFLMSKKLSLISKSEAVDSDITDDEAG 670
I +EP +ND L +K+ K + + + KL LI++ E+ S +T+ EA
Sbjct: 648 ISFEEPGIYNDFLKQLKDKILKEELGGDRRELWWLVRKSKLGLINQRESDQSRVTEKEAN 707
Query: 671 SFI 673
F+
Sbjct: 708 EFL 710
>gi|393218981|gb|EJD04469.1| SPOC domain-like protein [Fomitiporia mediterranea MF3/22]
Length = 913
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 124/264 (46%), Gaps = 31/264 (11%)
Query: 275 EQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 334
+Q IKG++YG P ++ + K + + GF R M +V A+P
Sbjct: 377 DQLIKGFKYGASYAPCPDGQFP--RLSTRKGMDICGFFPDHLFRRELAMSEVQYVWADPS 434
Query: 335 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLP 394
+S+ +++S++ +AM + VAI R V R +G+L P EK+ D F + +P
Sbjct: 435 SSQTQLSLSSIVQAMLSRHVVAIARYVSRDDMDP-KMGLLIPRQLEKV---DCFLWLQMP 490
Query: 395 FAEDVREFQFPSF-----------SKFPVSWQPNEQQQEAADNLVKMLDLAPSG----KG 439
FA+DVR++ FPS +K P + P E+Q E+ + V +DL +G G
Sbjct: 491 FADDVRKYTFPSLENLVSKKGERITKHP--FLPTEEQMESMEKFVDGMDLMHAGDKDETG 548
Query: 440 E---ILQPELTPNPALER----FYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQ 492
E P L+ NPA+ R +H + + PPP ++ +K + EP +L +
Sbjct: 549 ERTPWFDPRLSYNPAVHRIKQALFHAAVVSDLRTNPLPPPHEEVIKYL-EPPRRVLKRAL 607
Query: 493 SAIDAFCGQFVIKENPKLKKSTRR 516
A++ F +++ PK TR+
Sbjct: 608 PALEECKQAFKVRQVPKRVMRTRK 631
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 123/289 (42%), Gaps = 53/289 (18%)
Query: 9 LLLLDVSPSMHSV----LPDVEKLCSRL----------------IQKKLIYG-KNHEVGV 47
+ +DVSPSM S+ + D + +R IQ+ + +G K + GV
Sbjct: 12 MFCIDVSPSMGSLRSVEVSDSQDGTTRTVEMTNLAWAMQYVLLKIQEMIFHGRKTDQCGV 71
Query: 48 ILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGD----YMLIKK 103
ILFGTEET N + GGYEHV L I + + L++L T GD ++ +
Sbjct: 72 ILFGTEETNNVVNDSNGGYEHVTELIPIGQPNTGTLTKLQNLQPSTEIGDPIDAIIVAIE 131
Query: 104 YGETYKGKK-----HLCLITDALCPL--KDPDVGTKEDQVSTIARQMVAFGLRMKNIVVR 156
+ Y KK L ++TD P+ +D DV K+ IA ++ + V+
Sbjct: 132 TQDRYLAKKKSWTRKLVVLTDGENPIEVEDWDVTVKKINDLQIATTIIGVDFDDEEFGVK 191
Query: 157 ASLSGEPHMRVIIENDNLLNIF-SKKSSAKTLFVDSTTSLRGARK-----TRDISPVTIF 210
E + +EN+ + F S + + +L ++ T+ T
Sbjct: 192 Q----EDKSPIKLENERFFHEFISSLHDDLGMIGTAAYALHECQRPEVKETKSALLGTTL 247
Query: 211 R-GDLEL--SEKMKIKVWVYKKTGEEKFPTLKKY--------SDKAPST 248
R GD++ E +++ + + K T PTLKK+ SD+AP+T
Sbjct: 248 RLGDVDTRPEEAIELPIKMSKCTAAVHPPTLKKFAKRVVSDTSDEAPAT 296
>gi|451997927|gb|EMD90392.1| hypothetical protein COCHEDRAFT_1195612 [Cochliobolus
heterostrophus C5]
Length = 733
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 104/443 (23%), Positives = 191/443 (43%), Gaps = 52/443 (11%)
Query: 260 YEYKSVEDPS--KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI 317
Y+ +S +P K V ++ +GY YG V IS ++ VK + +++++L+GF A +
Sbjct: 310 YQVESQTEPGVKKNVEMDELERGYEYGRTAVHISESDMNVVKLETQQAMELVGFVRAEDF 369
Query: 318 LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGV---L 374
R + N + + N A + +S+ A+ E + A+ R V + + V++ + +
Sbjct: 370 ERFLPLSRTNFIVPQKANQPAQLGLSSFIHALYEADCYAVARLVAKDLKPPVLLLLVPRI 429
Query: 375 TPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFS-KFPVSWQ--------PNEQQQEAAD 425
P +++ LPF ED+R ++FP K VS + P + A
Sbjct: 430 EPEWEALVDVE-------LPFEEDMRRYKFPPLDRKLTVSGKVITEHKDLPTKNLLNAVS 482
Query: 426 NLVKMLDLAP------SGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLD--DSL 477
+ V +DL+ + E +PE T +P + R + ++ H D + P D + L
Sbjct: 483 DYVDAMDLSTFDRDEDGNEDEYAKPEDTFSPLVHRINQVIRWRATHPDPSLPIPDPPEIL 542
Query: 478 KKITEPDPTLLAESQSAIDAFCGQFVIKENP---KLKKSTRRFLREKP-SGSDEPNGDGS 533
K + P L+A +Q ++A +K+ P K + +R R+KP SG D
Sbjct: 543 TKYSMPPAELVASAQKQLNAVKQAADLKKVPPKVKGRGKRQRTERDKPLSGLD------- 595
Query: 534 VSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLEN 593
V+ + P + +L P F+ +S D D + A + + +I L+ N
Sbjct: 596 ------VDQLLGNPKRVKIESNNLIP--SFKQALSASDDLDAIQDAADGISKEIRSLISN 647
Query: 594 SNEGINYPKAVELLVALRKGCILEQEPKQFNDVL----EKVCKICRKRNFSTFFDFLMSK 649
S Y +A+E + +R+ +EP+ +N + E + N + +
Sbjct: 648 SVGDNAYQRALEAIRVMREELAELEEPEIYNAFIKQLKEDILGGKLNGNRREMWWRIKGN 707
Query: 650 KLSLISKSEAVDSDITDDEAGSF 672
+ LI + S IT+DEA F
Sbjct: 708 RYGLIDSKRSYVSPITEDEAKRF 730
>gi|339239001|ref|XP_003381055.1| putative Ku70/Ku80 beta-barrel domain protein [Trichinella
spiralis]
gi|316975959|gb|EFV59329.1| putative Ku70/Ku80 beta-barrel domain protein [Trichinella
spiralis]
Length = 887
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 130/606 (21%), Positives = 248/606 (40%), Gaps = 101/606 (16%)
Query: 2 ARTREALLLLLDVSPSMH--------SVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTE 53
A +EA+ + +D+ P M +L V + ++Q+++ E+ +IL+ T
Sbjct: 259 AIMKEAVAICVDIGPGMRERTVAKGRCLLGTVLRCVQWIVQRRIFSESKDELALILYNTA 318
Query: 54 ETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDYMLIKKYGETYKGKKH 113
+++N L+ +KVLQ V H C + L +K+ + K
Sbjct: 319 DSKNPLSDIDKNKYILKVLQ----VCIH------------CIDEKTLNEKFQQ-----KS 357
Query: 114 LCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDN 173
+ L + D ++ +D + + + + L + I L +E DN
Sbjct: 358 IVLFSSF-----DANIIINKDDMDNVTKAIKQHQLELAFISCNNDLCASN-----VEEDN 407
Query: 174 LLNIFSKKSSAKTLF------VDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVY 227
+ T ++ ++ G+ + R I V ++ +LE ++I + +Y
Sbjct: 408 YPKAWKYAKEFITAVDGIYCNLNDALNMLGSFQRRSIRSVP-WKCNLEFGTILQIPICMY 466
Query: 228 KKTGEEKFPTLKKYS-DKAPSTDKFATHEVKVDYEY-KSVED----------------PS 269
K K K++ + P D VK++ Y +S +D S
Sbjct: 467 LKCKCYKLNQSWKWAFAENPYVD------VKLERAYVRSWDDEDELLLLSNEEIISSTAS 520
Query: 270 KV-----VPPEQRIKGYRYGPQVVPISSAEWEAVKFKP-EKSVKLLGFTDASNILRHYYM 323
K+ V +K +R+G VVP++ + K+K EK K+LGF D + + ++
Sbjct: 521 KIWSGVEVDSSYLVKAFRFGSSVVPLNKFDLNEAKYKDREKCFKVLGFFDRCMVKQWHFA 580
Query: 324 KDVNLFI-AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKI 382
D F+ +P ++ A A SAL + K +KV +VR + +GVL P + +
Sbjct: 581 GDGTHFVFGDPKSATACQAFSALIHSCKSNSKVILVRYAYNVASNP-KIGVLIPLLKDTY 639
Query: 383 NIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLA-------P 435
+ F F +LPF ED+ S +F ++Q EA D L+ +++
Sbjct: 640 ---ECFVFVILPFEEDLIIVDQKSIGEFEKC-HVTDEQLEAVDKLIDAMNMTDLSSSASS 695
Query: 436 SGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAI 495
SG G I + NP + + + ++ P L D L + +P+ LL +++A
Sbjct: 696 SGDG-IFKWSKVKNPYYQNLFRCMTFRALQPKEKLPFLRDDLLEDVQPNVALLDNAKNAF 754
Query: 496 DAFCGQFVIK--ENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNSMESKPVVTVDK 553
D F+++ EN K K++ + + D + + ++++ K +VT+ K
Sbjct: 755 DLMRKNFILEKVENAKGKRTAAEVFKNELC-------DAFPAKVASFHAIDEK-IVTM-K 805
Query: 554 IGDLTP 559
IG + P
Sbjct: 806 IGTVNP 811
>gi|401425391|ref|XP_003877180.1| putative KU80 protein [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322493425|emb|CBZ28712.1| putative KU80 protein [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 798
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 113/505 (22%), Positives = 204/505 (40%), Gaps = 74/505 (14%)
Query: 7 ALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELTK--EVG 64
A +L+LD++ + L + LC R++ K+IY + EV VIL GTE++ + L + E
Sbjct: 5 ATVLVLDITLPSAAALVEACDLCDRILTDKMIYAPSDEVAVILAGTEKSRSALYERSEQA 64
Query: 65 GYEHVKVLQDIKVVDGHLVQSLKH-------LPQG-----TCAGDYMLIKKY-------- 104
Y+H+ V ++ + + LP+G + A Y I
Sbjct: 65 RYKHITVAAELGPATTLTLAPIAATRAGVAVLPEGATVRRSIAEAYDFIDALQVAVAVLQ 124
Query: 105 GETYKGKKHLC--LITDALCPLKDPDVGTKEDQVSTI-ARQ-----MVAFGLRMKNIVVR 156
T + + C L TDA +V KED +S I A Q +V G + +
Sbjct: 125 ARTSHKQYNRCIYLFTDA-----RHEVRHKEDLLSLIDALQRDQVALVVIGFDFQPLPAA 179
Query: 157 ASLSGEPHMRVII------------ENDNLLNIFSKKSSAKTLFVD-----STTSLRGAR 199
A E + + +N+ +L + ++ V + SL R
Sbjct: 180 ADSQEELNESAVCDASAWAALDRKAQNERILAALCTELGPPSVLVSPAEALESLSLLRCR 239
Query: 200 KTRD--ISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVK 257
+ R + V + GD+ L+ ++ + T EE+ P+L++ + D T E
Sbjct: 240 RIRQQPVLKVALRIGDVRLATQL------FTLTQEERLPSLRRSTQDG--VDVVQTIEY- 290
Query: 258 VDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI 317
V++ + E+R++ + G +P S + E ++ K ++++ +GF + +
Sbjct: 291 --VALGGVDEQPCALAKEERVEAFFLGVDRIPCSETDRETMRVKGPRALEAIGFVGEAEV 348
Query: 318 LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPN 377
+ M + G+ +AL AM K +VR V R + + V
Sbjct: 349 EPYLLMGGTRALLPLAGDHAGQRGFNALVDAMASSRKAMLVRLV-RTADAAPSLCVCFAR 407
Query: 378 VSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSG 437
+ LPFA+DVR FS++P Q + +++ D L+ L + S
Sbjct: 408 TAASSAEQRHLVLAPLPFADDVRALH---FSEYP-ELQFSAAEEQLMDELIDGLSVDDS- 462
Query: 438 KGEILQPELTPNPALERFYHHLELK 462
+L P+ T NP L+++Y L K
Sbjct: 463 ---VLAPDDTFNPVLQQYYATLRAK 484
Score = 42.4 bits (98), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 81/170 (47%), Gaps = 27/170 (15%)
Query: 525 SDEPN-GDGSVSDAQAVNSMESKP-----------VVTVDKIGDLTPIQDFEAMMSRRDC 572
+DE + G + SDA NS+ + P V +VD +G + I + +
Sbjct: 614 ADEASAGSHATSDA---NSISTAPHDTISGGVCFTVTSVDPVGSFSMIVHHPTVTQAQ-- 668
Query: 573 PDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCK 632
++KA +D+ + I+ LL +S + Y K + + ALR+ C+ + + +ND L K+
Sbjct: 669 ---LNKAKDDLSDVIWELLRSSIKDAIYRKCMACITALRQFCVTQDDAAYYNDFLLKLEV 725
Query: 633 ICRK--RNFSTFFDFLMSKKLSL----ISKSEAVDSDITDDEAG-SFIVK 675
+ R+ R+ + +++ +K S I+ E + + DD A +F+ K
Sbjct: 726 VARQCGRDADFWVPYVVERKDSANVWPITAQECTSAALPDDTAAKAFLQK 775
>gi|146093538|ref|XP_001466880.1| putative KU80 protein [Leishmania infantum JPCM5]
gi|134071244|emb|CAM69929.1| putative KU80 protein [Leishmania infantum JPCM5]
Length = 798
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 110/510 (21%), Positives = 202/510 (39%), Gaps = 78/510 (15%)
Query: 4 TREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELTK-- 61
++ A +L+LD++ + L + LC R++ K+IY + EV VIL GTE++ + L +
Sbjct: 2 SKGAAVLVLDITLPRAAALAEACDLCDRILADKMIYAPSDEVAVILAGTEKSRSALYERS 61
Query: 62 EVGGYEH------------------------VKVLQDIKVVDGHLVQSLKHLPQGTCAGD 97
E Y H V VL D V + ++ + A
Sbjct: 62 EQARYNHITVAADLGPATTLTLAPIAATRAGVAVLPDGATVRQSIAEAYDFIDALQVAVA 121
Query: 98 YMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIAR------QMVAFGLRMK 151
+ ++ + Y + + +TDA +V KED +S I +V G +
Sbjct: 122 VLQVRTSQKRYN--RCIYFLTDA-----RHEVRHKEDLLSLIGALQRDQVALVVIGFDFQ 174
Query: 152 ------------NIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVD-----STTS 194
N S + +N+ +L + + + V ++ S
Sbjct: 175 ALPAPTDSQGKFNEFTAGEASAWAALDRKAQNEIILAALCAELGSPSTLVSPAEALASLS 234
Query: 195 LRGARKTRD--ISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFA 252
L R+ R + V + GD+ L+ ++ + T EE+ P+L++ + + D
Sbjct: 235 LPRCRRIRQQPVLKVALRIGDVRLATQL------FTLTQEERLPSLRRSTQE--GVDVVQ 286
Query: 253 THEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFT 312
T E VE+ + E+R++ + G + S A+ E ++ K ++++ +GF
Sbjct: 287 TIEY---VAVGGVEEQPCALAKEERVEAFFLGADRISCSEADRETMRVKGPRALEAIGFV 343
Query: 313 DASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVG 372
+ + + M + G+ +AL AM K +VR V R + +
Sbjct: 344 GEAEVEPYLLMGGTRALLPLAGDHAGQRGFNALVDAMASSRKAMLVRLV-RTADAAPSLC 402
Query: 373 VLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD 432
V + LPFAEDVR + FS++P Q + +++ D L+ L
Sbjct: 403 VCFARTAGSSAEQRHLVLAPLPFAEDVRALR---FSEYP-ELQFSAAEEQLMDELIDGLS 458
Query: 433 LAPSGKGEILQPELTPNPALERFYHHLELK 462
+ S +L P T NP L+++Y L K
Sbjct: 459 VDDS----VLAPHDTFNPVLQQYYATLRSK 484
Score = 42.7 bits (99), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 81/165 (49%), Gaps = 14/165 (8%)
Query: 520 EKPSGSDEPNGDGSVSDA--QAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVD 577
E +GS + S+S A ++ S + +VD +G + I A+ + ++
Sbjct: 616 EASAGSHATSDANSISTAPHDTISGGLSFAITSVDPVGSFSMIVHHPAVTEAQ-----LN 670
Query: 578 KAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRK- 636
KA +D+ + I+ LL +S + Y K + ++ALR+ C+ + + +ND L K+ + R+
Sbjct: 671 KAKDDLSDVIWELLRSSIKDAIYRKCMACIMALRQFCVKQDDAAYYNDFLLKLEVVARQC 730
Query: 637 -RNFSTFFDFLMSKKLSL----ISKSEAVDSDITDDEAG-SFIVK 675
R+ + +++ +K S I+ E + + DD A +F+ K
Sbjct: 731 GRDTDFWAPYVVERKDSANVWPITAQECKSAALPDDTAAKAFLQK 775
>gi|398019168|ref|XP_003862748.1| KU80 protein, putative [Leishmania donovani]
gi|322500979|emb|CBZ36056.1| KU80 protein, putative [Leishmania donovani]
Length = 798
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 110/510 (21%), Positives = 202/510 (39%), Gaps = 78/510 (15%)
Query: 4 TREALLLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENELTK-- 61
++ A +L+LD++ + L + LC R++ K+IY + EV VIL GTE++ + L +
Sbjct: 2 SKGAAVLVLDITLPRAAALAEACDLCDRILADKMIYAPSDEVAVILAGTEKSRSALYERS 61
Query: 62 EVGGYEH------------------------VKVLQDIKVVDGHLVQSLKHLPQGTCAGD 97
E Y H V VL D V + ++ + A
Sbjct: 62 EQARYNHITVAADLGPATTLTLAPIAATRAGVAVLPDGATVRRSIAEAYDFIDALQVAVA 121
Query: 98 YMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIAR------QMVAFGLRMK 151
+ ++ + Y + + +TDA +V KED +S I +V G +
Sbjct: 122 VLQVRTSQKRYN--RCIYFLTDA-----RHEVRHKEDLLSLIGALQRDQVALVVIGFDFQ 174
Query: 152 ------------NIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVD-----STTS 194
N S + +N+ +L + + + V ++ S
Sbjct: 175 ALPAPTDSQGKFNEFTAGEASAWAALDRKAQNEIILAALCTELGSPSTLVSPAEALASLS 234
Query: 195 LRGARKTRD--ISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFA 252
L R+ R + V + GD+ L+ ++ + T EE+ P+L++ + + D
Sbjct: 235 LPRCRRIRQQPVLKVALRIGDVRLATQL------FTLTQEERLPSLRRSTQE--GVDVVQ 286
Query: 253 THEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFT 312
T E VE+ + E+R++ + G + S A+ E ++ K ++++ +GF
Sbjct: 287 TIEY---VAVGGVEEQPCALAKEERVEAFFLGADRISCSEADRETMRVKGPRALEAIGFV 343
Query: 313 DASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVG 372
+ + + M + G+ +AL AM K +VR V R + +
Sbjct: 344 GEAEVEPYLLMGGTRALLPLAGDHAGQRGFNALVDAMASSRKAMLVRLV-RTADAAPSLC 402
Query: 373 VLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD 432
V + LPFAEDVR + FS++P Q + +++ D L+ L
Sbjct: 403 VCFARTAGSSAEQRHLVLAPLPFAEDVRALR---FSEYP-ELQFSAAEEQLMDELIDGLS 458
Query: 433 LAPSGKGEILQPELTPNPALERFYHHLELK 462
+ S +L P T NP L+++Y L K
Sbjct: 459 VDDS----VLAPHDTFNPVLQQYYATLRSK 484
Score = 42.7 bits (99), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 81/165 (49%), Gaps = 14/165 (8%)
Query: 520 EKPSGSDEPNGDGSVSDA--QAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVD 577
E +GS + S+S A ++ S + +VD +G + I A+ + ++
Sbjct: 616 EASAGSHATSDANSISTAPHDTISGGLSFAITSVDPVGSFSMIVHHPAVTEAQ-----LN 670
Query: 578 KAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRK- 636
KA +D+ + I+ LL +S + Y K + ++ALR+ C+ + + +ND L K+ + R+
Sbjct: 671 KAKDDLSDVIWELLRSSIKDAIYRKCMACIMALRQFCVKQDDAAYYNDFLLKLEVVARQC 730
Query: 637 -RNFSTFFDFLMSKKLSL----ISKSEAVDSDITDDEAG-SFIVK 675
R+ + +++ +K S I+ E + + DD A +F+ K
Sbjct: 731 GRDTDFWAPYVVERKDSANVWPITAQECKSAALPDDTAAKAFLQK 775
>gi|388856904|emb|CCF49505.1| related to ATP-dependent DNA helicase II, 80 kDa subunit [Ustilago
hordei]
Length = 810
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 115/237 (48%), Gaps = 24/237 (10%)
Query: 272 VPP---EQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNL 328
+PP E + ++ G ++P+ + ++ KS+++L F +AS R Y M +
Sbjct: 364 LPPNSDENFTRAWKLGASLIPVPEESFGSLD--THKSMQILHFFNASAYRREYNMDQIWY 421
Query: 329 FIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSF 388
A+ +A + +S L RAM EM+ +A+VR V + G + +GV+ P V EK N + F
Sbjct: 422 VFADHAQVKAQLQLSTLVRAMAEMDVLAVVRLVRKDGAEP-ELGVIKPKV-EKHN--EYF 477
Query: 389 YFNVLPFAEDVREFQFPSFSKFPVS---------WQPNEQQQEAADNLVKMLDLAPSGKG 439
+++ PF ED+R F FP + + P+EQ QEA D + L+L P
Sbjct: 478 FYSKAPFREDLRRFPFPPLDRVITTDGTEIRIAPTIPDEQDQEAMDAFIDSLEL-PGEWY 536
Query: 440 EILQPELTPNPALERFYHHLELKSEHQDAA--PPPLDDSLKKITEPDPTLLAESQSA 494
++LQ + NPA+ + + H DA P P + +K + P A S +A
Sbjct: 537 DVLQ---SYNPAIHGLKTAVRHRFIHPDAKHLPAPHPELVKYLEAPYEVSKAASDAA 590
>gi|226483439|emb|CAX74020.1| ATP-dependent DNA helicase 2 subunit 2 [Schistosoma japonicum]
Length = 258
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 84/155 (54%), Gaps = 19/155 (12%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKD-VNLFIAEPGNS- 336
KGYRYG VVP + ++K EK ++GFTDA+N+ + Y D V +F+A+
Sbjct: 23 KGYRYGGTVVPFGQEDLASIKSPSEKCFSVVGFTDANNVPHNVYTGDSVLVFVAKTARQS 82
Query: 337 --------RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNV-SEKINIPDS 387
++ A+ ALA+A+ E+ VA+VR V+ Q +V +GVLTP + +I S
Sbjct: 83 EENLINCPSSSSALIALAQALYEIGGVALVRRVYNQ-TSAVRLGVLTPEIRGNQI----S 137
Query: 388 FYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQE 422
+ + F+ED+R + PS P+S +P+ E
Sbjct: 138 LMYTDIAFSEDIRNPELPS---LPLSCKPSSSTTE 169
>gi|302656140|ref|XP_003019826.1| hypothetical protein TRV_06114 [Trichophyton verrucosum HKI 0517]
gi|291183598|gb|EFE39202.1| hypothetical protein TRV_06114 [Trichophyton verrucosum HKI 0517]
Length = 675
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 136/641 (21%), Positives = 254/641 (39%), Gaps = 113/641 (17%)
Query: 61 KEVGGYEHVKVLQDIKVVDGH------LVQSLKHL-----PQGTCAGDYM--------LI 101
KE+G Y VK + +DG L+ LK L P T GD + +I
Sbjct: 17 KEIGQYVFVKP----RGLDGSNTSLRALMPDLKELRSLIKPSNTDNGDAISSIILAIDMI 72
Query: 102 KKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSG 161
KY + K K+ + L+T+ P+ + T ++ ++V G+ ++ +
Sbjct: 73 TKYCKKLKYKRKIVLVTNGKGPMDLDGMDTIAGKIREEGIELVILGVDFDDL--DFGVKE 130
Query: 162 EPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSE--- 218
E V EN++ L ++ S + + + + F+GD +L +
Sbjct: 131 EDKDAVKAENESSLQKLCDVCDGVYGTLEQAISELDTPRVKVVRGIPSFKGDFKLGDPDK 190
Query: 219 ---KMKIKVWVYKKTGEEKFPTLKKY-------------------SDKAPSTDKFATHEV 256
+ I+V Y +T + P + D T K ++E+
Sbjct: 191 YDSALTIQVERYFRTYAARPPPASSFVLSGAPPEVQETGDSSANLKDARTDTGKSISNEL 250
Query: 257 KVDYEYKSVE-DPSKVVPPEQRI------KGYRYGPQVVPISSAEWEAVKFKPEKSVKLL 309
+S + S VV ++ + KGY YG V I+ ++ K + + +++++
Sbjct: 251 TSVRNARSYQVTDSGVVGGKRDVERDALAKGYEYGRTAVHITDSDENITKLETKAALEIV 310
Query: 310 GFTDASNILRHYYMKDVNLFIAEP--------GNSRATVAVSALARAMKEMNKVAIVRCV 361
GF N+ + +K + + P N++A +A+S++ A+ E+ A+ R V
Sbjct: 311 GFIPIENVC--FIIKSILIIYKLPFTDYVLIRTNNKAIIALSSIINALHEVESYAVGRLV 368
Query: 362 WRQGQQSVVVGVLTPNVSEKINIPD--SFYFNVLPFAEDVREFQFPSFSKFPVSWQ---- 415
+ G+ +V +L P++ PD LPFAEDVR ++FP +
Sbjct: 369 TKDGKSPTLV-LLAPSID-----PDYECLLEVQLPFAEDVRCYRFPPLDRVTTMSGKVVK 422
Query: 416 -----PNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAP 470
PNE A + V+ ++L P E + ++ H
Sbjct: 423 EHRNLPNENLLAAMEKYVENMELV--------------QPGEEGVDQAIRWRAIHPTKPL 468
Query: 471 PPLDDSLKKITEPDPTLLAESQSAIDAFC-GQFVIKENPKLKKSTRRFLREKPSGSDEPN 529
PP+ L+K + L+ +S+SA++ V K PK+K R + +KP
Sbjct: 469 PPIPKVLQKQSRQPDELMEQSKSALEQLIKASDVKKVPPKVKGRKRNRITDKPL------ 522
Query: 530 GDGSVSDAQAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFG 589
S D A+ E + +I I +F+ ++ D + V K+++ M I
Sbjct: 523 ---SGLDVDALLQGEKR-----QRISPENAIPEFKQALANTDDINTVKKSVKQMCAIIEN 574
Query: 590 LLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKV 630
+++S NY + VE + +R I +EP +ND + ++
Sbjct: 575 QIKHSLGDANYDRVVEYIGTMRDELISFEEPDLYNDFIREL 615
>gi|340959514|gb|EGS20695.1| hypothetical protein CTHT_0025310 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 652
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 77/153 (50%), Gaps = 13/153 (8%)
Query: 265 VEDPS-----KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILR 319
V+DP+ + VP ++ +GY YG VP S +++ +KF +KS +LGF S+
Sbjct: 278 VKDPNAPGGKRDVPADEVERGYLYGETAVPFSESDYTVIKFDAKKSFTILGFIPFSSYQP 337
Query: 320 HYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVS 379
M + +A+ N A +A+S+ + E+ A+ R V + G Q ++ +L PN
Sbjct: 338 FLSMGEAGCVVAQRNNPEAEIALSSFIHTLYELESYAVARFVQKDGAQPQIL-LLKPNP- 395
Query: 380 EKINIPDSF---YFNVLPFAEDVREFQFPSFSK 409
I D F Y LPFAEDVR F FP K
Sbjct: 396 ---GIEDEFECLYDVPLPFAEDVRNFPFPPLDK 425
Score = 46.2 bits (108), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 60/111 (54%), Gaps = 14/111 (12%)
Query: 41 KNHEVGVILFGTEETENELTKE-VGGYEHVKVLQDIKVVDGHLVQSLKHL--PQGTCAGD 97
K VGV+ F T++T+N +E + GYE++ VLQ+I + ++ L+ L P + +GD
Sbjct: 49 KTWTVGVVGFNTDDTDNPQDREGLEGYENISVLQEIGSMTMSSLRRLRSLIKPSHSSSGD 108
Query: 98 YM--------LIKKYGETYKGKKHLCLITDALCPLKD---PDVGTKEDQVS 137
+ +I+K+ + K K+ + L+T+ P+ D DV + +Q S
Sbjct: 109 AISAVVVALDMIEKFTKKLKYKRKIILVTNGHTPIDDDSTEDVALRLNQSS 159
>gi|19113583|ref|NP_596791.1| Ku domain protein Pku80 [Schizosaccharomyces pombe 972h-]
gi|74624850|sp|Q9HGM8.1|KU80_SCHPO RecName: Full=ATP-dependent DNA helicase II subunit 2; AltName:
Full=ATP-dependent DNA helicase II subunit Ku80;
AltName: Full=Pombe Ku80
gi|9929270|emb|CAC05245.1| Ku domain protein Pku80 [Schizosaccharomyces pombe]
Length = 695
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 141/647 (21%), Positives = 265/647 (40%), Gaps = 64/647 (9%)
Query: 32 LIQKKLIYGKNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL-- 89
L K L K VG++ + ++T+N+L E Y ++ VL I+ +QS+
Sbjct: 40 LSHKFLANRKTDVVGIVGYKCDDTKNDLA-EQEAYWNISVLYPIQTALFSKLQSVSQTLK 98
Query: 90 PQGTCAGDYM--------LIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIAR 141
P T GD + L+ ++ + K KK + ++T A + D +Q+
Sbjct: 99 PSNTMQGDLISAIVVSFDLMARHCKKNKWKKKMIVLTAARGIIDFSDYIGIAEQLLQHDV 158
Query: 142 QMVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKT 201
+ +G+ + S + + EN+ + F + + + G
Sbjct: 159 FLGVYGVDFDQEDINYSEPLKESQKK--ENEVRIQEFVESCHGQYCTFQQIYNNIGKPWV 216
Query: 202 RDISPVTIFRGDLELSEK------MKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHE 255
R + PV IFRG + + + I+V Y +T K PT + + S + +
Sbjct: 217 RKVRPVAIFRGTFSIGNRDSKDTSISIQVERYPRTRLTKPPTSSAFYENDMSKNYECLNI 276
Query: 256 VKVDYEYKSVE-------------DP----SKVVPPEQRIKGYRYGPQVVPISSAEWEAV 298
+ E KS+E DP S V E GY YG +VPIS ++ + +
Sbjct: 277 ENSNVENKSMESDAVSTVRSYMVRDPKTNDSFEVKREDLESGYSYGRTIVPISRSDEDVL 336
Query: 299 KFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIV 358
++LGF S++ +Y + D N+ + + + + + SA ++++ ++ A+
Sbjct: 337 ALDTIPGYEILGFIPKSSLPIYYTISDTNIIVPK-DDFESKLNFSAFVQSLEREHRYALA 395
Query: 359 RCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNV-LPFAEDVREFQFPSFSKFPVSWQPN 417
R V + V++ VL P V K + + ++ LPFAEDVR + F F K + +
Sbjct: 396 RFVSKDKGVPVLL-VLMPYVEFKRH----YLVDIQLPFAEDVRPYSFSEFEKLS-NEEDM 449
Query: 418 EQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAP----PPL 473
Q A N + +DL S G P P H L+ + +P P
Sbjct: 450 RQIDFAVSNYIDNMDLDSSDCG--FNPPFEPENTFSMIPHRLQQAISYYANSPEGDLPQP 507
Query: 474 DDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGS 533
+ L + T P +LL + + + K K S+ +E + P +
Sbjct: 508 NIYLTRYTNPPKSLLDNCILDLKLIKEKLTVNVPVKPKYSS----QETAFDTGAPISEEQ 563
Query: 534 VSDA--QAVNSMESKPVVTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLL 591
+ + ++ E + ++ + + + P+ F ++ P ++ A+ +M+ I L+
Sbjct: 564 IEELLNSGLDEQEGEKLLVL-HVSEKDPVGTFTEVLKN---PFGLEDALTEMEKVIKNLI 619
Query: 592 ENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRN 638
+ S Y A++ L +LR ILE E ++FN+ L ++ K + N
Sbjct: 620 DKS----KYDLALQSLQSLRLHSILEDEVERFNEYLTRLKKDVMQNN 662
>gi|294953906|ref|XP_002787962.1| ku p80 dna helicase, putative [Perkinsus marinus ATCC 50983]
gi|239903057|gb|EER19758.1| ku p80 dna helicase, putative [Perkinsus marinus ATCC 50983]
Length = 137
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 73/144 (50%), Gaps = 9/144 (6%)
Query: 220 MKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDP-SKVVPPEQRI 278
MKI +W Y KT + PTLKK S + VK+D Y +V+DP + +P E+R
Sbjct: 1 MKIPIWCYLKTSKVTLPTLKKESTHTSAA-------VKMDRVYYAVDDPDGEAIPAEERA 53
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYM-KDVNLFIAEPGNSR 337
K Y+YG Q V + ++K+ +K + +LGF + I + + + AEP N
Sbjct: 54 KAYKYGTQFVRFEPYDEASLKYHSDKCLTMLGFARSETIPEELMIGESIECVAAEPNNLD 113
Query: 338 ATVAVSALARAMKEMNKVAIVRCV 361
A A+S+L +AM M V + C
Sbjct: 114 AAKALSSLIKAMDAMGVVVLYLCC 137
>gi|322789872|gb|EFZ15019.1| hypothetical protein SINV_15786 [Solenopsis invicta]
Length = 527
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 113/508 (22%), Positives = 206/508 (40%), Gaps = 85/508 (16%)
Query: 6 EALLLLLDVS------PSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENEL 59
E+L+ L+DV S +L + + +IQKK+ E+GVIL G+ E+
Sbjct: 1 ESLIFLVDVGVPCQDDQSSLQLLDKEKYILKHIIQKKIFLRPKDEIGVILMGSGSNESSS 60
Query: 60 TKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDYMLIKKYGETYKGKKHLCLITD 119
E +++V+ L ++V + L+++++ L + +M Y K C + +
Sbjct: 61 ATE---FDNVQELCSMQVGNWDLIKNIERLQTTNQSCSWMEAIYAAVDYI--KREC-VGE 114
Query: 120 ALCPLKDPDVGTKEDQ-----VSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNL 174
P+ D D T + + I Q + F M ++
Sbjct: 115 KTLPIADEDSQTASEVLLMEVIEQIGGQYLTFENAMSDVR-------------------- 154
Query: 175 LNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEK 234
F K+ S K + +EL + + K E K
Sbjct: 155 ---FYKRPSTKPF---------------------QWHCQMELGDFCFPITGIAKMPNEVK 190
Query: 235 FPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAE 294
P + + S + A EV + + ++ + E I+GY YG + +P+S
Sbjct: 191 LPDMTLMGKLSASNKEEADKEVPIKNVAQWTDNNRTIHTQEDIIRGYVYGGKAIPVSDES 250
Query: 295 WEAVKFKP-EKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMN 353
+ + K EK K+ GFT N+ ++ D + I P N A+ +L +AM + N
Sbjct: 251 KKRMTPKNNEKCYKIHGFTARENVPMECWLSDGSYVIV-PANESASAPFYSLVQAMVDKN 309
Query: 354 KVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNV---LPFAEDVREFQFPSFSKF 410
VAIV V+R ++ ++ L P+V ++P+ + + LPF D + + ++
Sbjct: 310 VVAIVEKVYRANTEANMMA-LFPSV----DVPNEPWCLIEIGLPFERD-----YGAIAQR 359
Query: 411 PVSW---QPNEQQQEAADNLVKMLDLAPSGK-----GEILQPELTPNPALERFYHHLELK 462
P+ Q +++Q +A D+L+ L+L + GE P P+P + + L +
Sbjct: 360 PLKKMMDQLSKEQNDAIDDLLTSLELPDAADDDVTGGEKYLPGYMPDPGAQHMWDTLVAR 419
Query: 463 SEHQDAAPPPLDDSLKKITEPDPTLLAE 490
+ + D PP+ D L + EP P L E
Sbjct: 420 ALNPDKPLPPIADDLLNLLEP-PEFLKE 446
>gi|226483441|emb|CAX74021.1| ATP-dependent DNA helicase 2 subunit 2 [Schistosoma japonicum]
Length = 548
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 84/155 (54%), Gaps = 19/155 (12%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKD-VNLFIAEPGNS- 336
KGYRYG VVP + ++K EK ++GFTDA+N+ + Y D V +F+A+
Sbjct: 23 KGYRYGGTVVPFGQEDLASIKSPSEKCFSVVGFTDANNVPHNVYTGDSVLVFVAKTARQS 82
Query: 337 --------RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNV-SEKINIPDS 387
++ A+ ALA+A+ E+ VA+VR V+ Q +V +GVLTP + +I S
Sbjct: 83 EENLINCPSSSSALIALAQALYEIGGVALVRRVYNQ-TSAVRLGVLTPEIRGNQI----S 137
Query: 388 FYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQE 422
+ + F+ED+R + PS P+S +P+ E
Sbjct: 138 LMYTDIAFSEDIRNPELPS---LPLSCKPSSSTTE 169
>gi|409050963|gb|EKM60439.1| hypothetical protein PHACADRAFT_82428 [Phanerochaete carnosa
HHB-10118-sp]
Length = 878
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 131/559 (23%), Positives = 221/559 (39%), Gaps = 97/559 (17%)
Query: 41 KNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDYML 100
K + GVI+FG+ +T N + ++ GGYE+V L I + + L GD +
Sbjct: 66 KTDQCGVIVFGSRKTNNHVNRKQGGYENVDELVPILHPTAKTIAQISELNPAEEIGDPLD 125
Query: 101 IKKYG----ETYKGKKH-----LCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMK 151
G + Y G K + L+TD P++ + IA+++ L++K
Sbjct: 126 ALVVGIETQDQYLGNKKTWTRKIVLLTDGENPIEI-------QHLEKIAQRL--NDLKIK 176
Query: 152 NIVVRASLSGEPHMRV-----IIENDN------LLNIFSKKSSAKTLFVDSTTSLRGARK 200
+V E V I+ +N L+ S +++
Sbjct: 177 LTIVGVDFDDEEFGYVEEDKSDIKRENEEFYHTLVGTLDNGVVGNCTAAIEEISRPESKQ 236
Query: 201 TRDISPVTIFR-GDLEL--SEKMKIKVWVYKKTGEEKFPTLKKYSD--------KAPSTD 249
TR ++ R GD+E E ++I V + K T + + KK++ + P D
Sbjct: 237 TRSQPSASVLRLGDVENHPEEAIEINVKISKCTALVRPKSFKKFARIGDEDIEMQNPGDD 296
Query: 250 KFATHEV-KVDYEYKSVEDPS----------------------KVVPPEQRIKGYRYGPQ 286
T E ++ E + DPS + V E+ I+GY+YG
Sbjct: 297 SEPTVEYGQLTREIRYAFDPSGRRDDEEADRDAEEETEKKDDLQDVEKEELIRGYKYGSS 356
Query: 287 VVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALA 346
VP+ + K + ++ +++ GF R + + +V A + VA+S+L
Sbjct: 357 FVPVPENNFP--KLETKRGMEICGFFKDEFFRREWSIGEVRYVFAADKSPLQQVALSSLV 414
Query: 347 RAM------KEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNV----LPFA 396
AM KE+ AI R + G + + GVL P E N + V +PFA
Sbjct: 415 EAMFQEINGKEIMYYAITRWITTDGSEPKM-GVLQPVKDESANY--LLWVQVRASHMPFA 471
Query: 397 EDVREFQFPSFSKFPVS---------WQPNEQQQEAADNLVKMLDLAPSGKGE------- 440
+D+R++ FPS + + P E+Q E ++LV L+L +G+ +
Sbjct: 472 DDLRKWSFPSLDQLVNGKGQLVMTHPYLPTEEQLETMEDLVDALNLMEAGEKDEDGNRTP 531
Query: 441 ILQPELTPNPALERFYH---HLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDA 497
L+ NPA+ R H + + PP L K EP ++ ++ AIDA
Sbjct: 532 WYDTRLSYNPAIHRIKQAQFHAAIVEDLNRQPLPPPHPELLKYFEPPRRVMKRARPAIDA 591
Query: 498 FCGQFVIKENPKLKKSTRR 516
F +KE PK R+
Sbjct: 592 AREAFNVKEVPKTVARNRK 610
>gi|332018465|gb|EGI59055.1| ATP-dependent DNA helicase 2 subunit 2 [Acromyrmex echinatior]
Length = 651
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 119/250 (47%), Gaps = 18/250 (7%)
Query: 275 EQRIKGYRYGPQVVPISSAEWEAVKFKP-EKSVKLLGFTDASNILRHYYMKDVNLFIAEP 333
E I+GY YG + +P+S +A+ K EKS K+ GFT N+ Y++ D + I P
Sbjct: 226 EDIIRGYVYGGKAIPVSDEAKKAMTPKNNEKSYKIHGFTKRENVAMEYWLSDGSYVIV-P 284
Query: 334 GNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVL 393
N A+ +L +AM + N +AIV V+R ++ +V L P+V + N P L
Sbjct: 285 ANEAASAPFYSLVQAMVDKNVIAIVEKVYRANTEANMVA-LFPSVDVE-NEPWCLIEIGL 342
Query: 394 PFAEDVREFQFPSFSKFPVSWQPNEQQQE---AADNLVKMLDLAPSGKGEILQ------P 444
PF D + + ++ P+ N+ QE A D+L++ L+L + + + P
Sbjct: 343 PFERD-----YGAIAQKPLKGMTNQLSQEQDNAIDDLLRSLELPDAADDDTISSSEKYLP 397
Query: 445 ELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVI 504
P+P + + L +++ + D PP+ D L + E + A+ + + F +
Sbjct: 398 GYMPDPGTQHMWDVLTVRALNPDKPLPPIADDLLNLLEQPEFIKAKCKPVTERIKNLFFL 457
Query: 505 KENPKLKKST 514
++ +KS+
Sbjct: 458 EKKKPFRKSS 467
>gi|145349222|ref|XP_001419039.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579269|gb|ABO97332.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 640
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 102/216 (47%), Gaps = 19/216 (8%)
Query: 204 ISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYK 263
+ P + +RG L + V +YK E L +YS++ + +H+ V+ Y+
Sbjct: 274 VRPTSGYRGFLSFGFNAGVNVALYKLNTEAVPVKLNRYSEELADRPE-ESHQTLVETTYR 332
Query: 264 SVED-PSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYY 322
+V D + VPPE+ +K +RYG Q +PI + + + EKS+K++G
Sbjct: 333 NVNDLDGEFVPPERHVKAFRYGKQHIPIDAETESRLSMRFEKSMKVIGSISMDECPLWLS 392
Query: 323 MKDVNLFIAEPGNSRATVAVS------------ALARAMKEMNKVAIVRCVWRQGQQSVV 370
+ + ++ + +P S T +S ALARA+ + +VR + +G S+
Sbjct: 393 VGEPSVCVPQP--STKTTGLSQERAAADATALSALARALDDAKLALLVRGAFTEGTTSIH 450
Query: 371 VGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPS 406
+G LTP +++ D + LPF ED E+ PS
Sbjct: 451 IGALTPRLTDA---GDFLLYTPLPFKEDYNEYSLPS 483
>gi|285475086|dbj|BAI68043.1| piggyBac-like protein Tpb1p [Tetrahymena thermophila]
Length = 1363
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 136/315 (43%), Gaps = 29/315 (9%)
Query: 142 QMVAFGLRMKNIVVRASLSGEPHMRVIIE--------NDNLLNIFSKKSSAKTLFVDSTT 193
Q+ F + +K ++ +L GE M+ + E N N+ + K+ + T
Sbjct: 142 QLQEFIMHLKRDQIKITLIGEEIMKNLREDSVTDWKDNQNIEFLIKLKNQISKKNIQFLT 201
Query: 194 SLRGARKTRDISPVTI-----FRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKA--- 245
S + + I P I + G ++ ++ V V+ KT E+ LK YS+
Sbjct: 202 SEEALQISLRIKPKQILQRPKYNGTFQIRNELTADVVVFTKTLEKHLLNLKTYSNITEWN 261
Query: 246 PSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKS 305
PST + V+ +Y V+D P + K Y+YG Q+V +S + K
Sbjct: 262 PSTQR---QMVEQQIQYYQVDDILLENPVQDISKYYKYGNQLVKMSELFLNQINLFTLKE 318
Query: 306 VKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQG 365
+KL+G S+I R +M ++ A+ + R+ +++L +A E + + R V RQ
Sbjct: 319 IKLIGSVQKSSIPRQSFMSGCDILFAKQDSKRSRYIIASLIKACFEEQRYLVARFVLRQN 378
Query: 366 QQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAAD 425
+V VL P++ + + FY LP E +R++ F S + +QQ+
Sbjct: 379 SIPKLV-VLIPHLKKNC---EYFYIIELPTVESIRDYSFNSLIR------STPEQQKLMS 428
Query: 426 NLVKMLDLAPSGKGE 440
L+ LDL K +
Sbjct: 429 QLIDELDLDQDEKNQ 443
>gi|406700347|gb|EKD03519.1| damaged DNA binding protein [Trichosporon asahii var. asahii CBS
8904]
Length = 798
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 98/422 (23%), Positives = 179/422 (42%), Gaps = 65/422 (15%)
Query: 272 VPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIA 331
+P E+ +K +RYG +P+ +E +K +K V++LGF N + + +V
Sbjct: 355 IPKEELVKAWRYGSSWIPVEDDTFEPLKT--QKGVEVLGFIPQKNYM---LIGEVRYLWP 409
Query: 332 EPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTP--NVSEKINIPDSFY 389
+ +S+A + S+ A+ VAI R V + G +GV P ++ + D Y
Sbjct: 410 DLKSSKAQIQFSSFVSALVTTGMVAITRWVTKDGSPP-EIGVCIPKQEFGDEKRL-DLMY 467
Query: 390 FNVLPFAEDVREFQFPSFSKF-PVS--------WQPNEQQQEAADNLVKMLDL---APSG 437
+ LPFA+D F FPS + + VS + P ++Q + D LVK LDL P G
Sbjct: 468 WIRLPFADDDHRFFFPSLTNYKSVSGNEITEHPYIPTQEQSDLMDELVKGLDLDSVTPEG 527
Query: 438 -----------KGEIL------QPELTPNPALERFYH---HLELKSEHQ-DAAPPPLDDS 476
GE + P + NPA+ R H L ++ + D PP +
Sbjct: 528 ATQQDDEDEDEDGEPILHSPWYDPAFSYNPAIHRTKQAILHASLTADTKADPLGPPHPEL 587
Query: 477 LKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSD 536
K P+ L+ +++ + IK+ ++++ R+ ++ + P +VS
Sbjct: 588 TKYFYTPE-KLVEQTEKITERLKDALDIKKVTRVQRKKRQIDIDELFDNPGPGKTETVSP 646
Query: 537 A--QAVNSMESKPVVTVDK-----------------IGDLTPIQDFEAMMSRRDCPDWVD 577
A + ++ KP D I +L P++DF+ + + D
Sbjct: 647 AKPKVAADVDKKPDFADDPDFILPPSADAKPKPGRLISNLRPLEDFKRVTASGDV---FK 703
Query: 578 KAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKR 637
KAI+DM + + S +P A+ L R ++ +E + +N++++ + K
Sbjct: 704 KAIQDMGVVVEENVAASFSKQAFPDAIACLEEARSTALMYEETETYNEIVKNLGKAVTDP 763
Query: 638 NF 639
+F
Sbjct: 764 SF 765
>gi|403177245|ref|XP_003335793.2| hypothetical protein PGTG_17028 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375172789|gb|EFP91374.2| hypothetical protein PGTG_17028 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 568
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 11/168 (6%)
Query: 275 EQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 334
E K Y+YG +V + + A++ + +++ GF + NI RH+ + +V
Sbjct: 380 ENLAKAYKYGASLVVVDKEDEAAIRQSFSECLEIRGFVNLKNIPRHHLLNNVYYLYPIAT 439
Query: 335 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLP 394
+ + ++ SA+ RAM + N+ A+ R V R + +L P V I F F +P
Sbjct: 440 DYGSQISFSAIVRAMNDANRAALARYVGRSVVAEPKLVILIPVVEPTIRY---FLFIQVP 496
Query: 395 FAEDVREFQFPSFSKFPV--------SWQPNEQQQEAADNLVKMLDLA 434
F +D+R++ FP P+ + P ++ Q+A D LV +DL+
Sbjct: 497 FVDDLRQYAFPPLPTGPILGNRTVRTQYVPTDEMQDAMDELVDKMDLS 544
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 62/151 (41%), Gaps = 33/151 (21%)
Query: 1 MARTREALLLLLDVSPSMH-------------SVLPDVE---KLCSRLIQKKLIYG-KNH 43
MA RE + +DVSPSM + + ++E ++ + L+ G K
Sbjct: 1 MAGGRELTIYAIDVSPSMSEKRTADDPSTGATTSVTNLEYGLEVVKHQVANMLLAGLKTV 60
Query: 44 EVGVILFGTEETENELTKEVGGYEHVK-----------VLQDIKVVDGHLVQSLKHLPQG 92
GV+LFGTE T+N L GYE++ L I ++ HL S K
Sbjct: 61 HCGVVLFGTERTDNSLAS--SGYEYIWEYVRPGQPSAITLLHINKIEQHLTTSEKPFKGD 118
Query: 93 TCAGDYMLIKKYGETYKGKK---HLCLITDA 120
+ + GET KK + L+TDA
Sbjct: 119 LLSAIILCNHHMGETLAAKKWTRKIVLVTDA 149
>gi|312306086|gb|ADQ73897.1| DNA-dependent protein kinase [Alternaria alternata]
Length = 660
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 125/619 (20%), Positives = 237/619 (38%), Gaps = 111/619 (17%)
Query: 5 REALLLLLDVSPSMHSVLPDVE--------------KLCSRLIQKKLIYGKNHEVGVILF 50
++A+L +DVSP+M P E K +L+Q+++I N +G++LF
Sbjct: 28 KDAVLFAIDVSPTMLEKPPKSEDKKAERDSPTSAALKCAYQLMQQRIISNPNDMMGILLF 87
Query: 51 GTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL------------PQGTCAGDY 98
GTE+T+ L +++ +L D+ V V+ L+ + P A
Sbjct: 88 GTEKTD--LKDGDNTFQNCYLLADLDVPSAQDVKRLRDMVENEEEAEEILKPTKDGASMA 145
Query: 99 MLIKKYGETYKGK------KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGL---- 148
++ + + K + L L+TD P+K V +D T AR + G
Sbjct: 146 TVLFCANQIFTTKAPNFSSRRLFLVTDNDYPVK---VKADKDTAVTRARDLYDLGCTIDL 202
Query: 149 -------------RMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSL 195
R +V + +P + I + + + S + S S
Sbjct: 203 FPISQPDHTFDRSRFYGDLVYPTSPSDPDAPIAIPSTTQVAKSGEGISLLKQLISSINSK 262
Query: 196 RGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHE 255
R+ +F +EL ++I V Y L K + S + E
Sbjct: 263 AAPRRA-------LFSLPMELGPDLRIGVKGY---------ILIKRQEHVKSCYVWVGGE 306
Query: 256 ---VKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVK--FKPEKSVKLLG 310
+ V + D ++ + + K Y++G + + E ++ F E ++++G
Sbjct: 307 KPQIAVSTTTQMANDSARAIEKTELRKAYKFGGDAITFTPEEITQIRQCFG-EPVIRIIG 365
Query: 311 FTDASNI-LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSV 369
F S++ + K ++ +E +T SAL + + K+ +V + R+ +
Sbjct: 366 FKPISSVPIWANTNKSTFIYPSEADYIGSTRVFSALQHKLLKSQKMGLVWFIPRR-NAAP 424
Query: 370 VVGVLTPNVSEKIN------IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEA 423
+ L P EK+N +P + LPFA+D+R+F P +P +
Sbjct: 425 TLAALIPG-EEKVNEEGEQLMPPGLWLVPLPFADDIRQFPTP-------PERPLKTTDAL 476
Query: 424 ADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEP 483
DN+ +++ KG I P PNP L+ FY L+ + ++ P D ++ + +
Sbjct: 477 TDNMRLIIEQLQLPKG-IYDPSRYPNPDLQWFYRILQALALEEELPVQPEDKTIPRYKQ- 534
Query: 484 DPTLLAESQSAIDAFCGQFV------IKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDA 537
ID CG+++ +E ++ + R KP+ P G D
Sbjct: 535 -----------IDKRCGEYIEDYGKEFEEAYAQQQKSALAHRTKPTAKKRPGGGADGEDK 583
Query: 538 QAVNSMESKPVVTVDKIGD 556
A ++ +P V + G+
Sbjct: 584 PAAKRVKKEPKVKAEDGGE 602
>gi|343426087|emb|CBQ69619.1| related to ATP-dependent DNA helicase II, 80 kDa subunit
[Sporisorium reilianum SRZ2]
Length = 822
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 92/183 (50%), Gaps = 19/183 (10%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRA 338
+ ++ G ++P+ + + + KS+++L F +AS R Y M + A+ +A
Sbjct: 374 RAWKLGASLIPVPDESFGEMDTR--KSMEILHFFNASAYRREYNMDQIWYVFADHAQIKA 431
Query: 339 TVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAED 398
+ +S L RAM EM+ +A+VR V + G + +GVL P V E + F+++ PF ED
Sbjct: 432 QLQISTLVRAMVEMDVLAVVRLVRKDGAEP-ELGVLKPKVEEH---NEYFFYSKAPFRED 487
Query: 399 VREFQFPSFSKFPVS---------WQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPN 449
+R F FP + + P++ Q+A D V L+L P G ++L + N
Sbjct: 488 LRRFPFPPLDRVITTDGTELRQGPTIPDDADQQAMDAFVDSLEL-PDGWFDVLD---SYN 543
Query: 450 PAL 452
PA+
Sbjct: 544 PAI 546
>gi|393247894|gb|EJD55401.1| SPOC domain-like protein [Auricularia delicata TFB-10046 SS5]
Length = 826
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 169/777 (21%), Positives = 290/777 (37%), Gaps = 176/777 (22%)
Query: 33 IQKKLIYG-KNHEVGVILFGTE--------ETENELTKEVGGYEHVKVLQDIKVVDGHLV 83
IQ+ + +G K + GVILFGTE ET N + + GGY+HV +I + +
Sbjct: 56 IQEMIFHGRKTDQCGVILFGTEGAPTADCCETGNIVNEAHGGYDHVIEFIEIAQPNATTL 115
Query: 84 QSLKHLPQGTCAGD-----------YMLIKKYGETYKGKKH----LCLITDALCPLKDPD 128
L + D + I+ + K+ + +ITDA P++
Sbjct: 116 AKLSEISSTVIEDDDAFSADPIDAIIVAIETQEQALSTKRSWTRKMIVITDAEAPME--- 172
Query: 129 VGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLF 188
E+ +T+++ + +G+R ++V E V EN + + ++K +
Sbjct: 173 ---LEEWEATVSK-INDYGVR--TLIVGVDFDDE-EFGVQEENKSTIKRENEKFWKEQFV 225
Query: 189 VDSTTSLRGA-------------RKTRDISPVTIFR-GDLEL--SEKMKIKVWVYKKTGE 232
T + ++T+ + T+ R GD E E ++I V K T
Sbjct: 226 PKLETGIVATCAEVLQDCDKPDIKETKSAALSTVLRIGDPEGHPDEAVEITVRTAKATAV 285
Query: 233 EKFPTLKKYSDKAP----------------------------------STDKFATHEVKV 258
+ PT+KK++ + P ST+ +A
Sbjct: 286 TRPPTMKKFAKREPKDEDKDEDKDKMDVDEVKKEEEEPENDIYVELKASTEYYAKKVKDE 345
Query: 259 DYEYKSVEDPSK----VVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDA 314
+ E K VED + V ++ + +YG V +E + + K + L G
Sbjct: 346 EGEKKDVEDAADGELDQVDKQETVNVLKYGASWVDEPEGGFEGLATR--KGIDLYGVFPE 403
Query: 315 SNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL 374
R + M +V + + R A+S+L R+M E R + R S + VL
Sbjct: 404 FKFRRDWAMGEVTYVWPDARSGRHQAALSSLVRSMSEKQVYGYCRLISRD-NSSPKMCVL 462
Query: 375 TPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKF-----------PVSWQPNEQQQEA 423
P E +N D F +PF+ DVR F F S ++ P+ P ++Q A
Sbjct: 463 RP---ENVNGVDCFLMVQMPFSNDVRSFGFESLTRLYSKKGTQITQHPL--LPTDEQLTA 517
Query: 424 ADNLVKMLDLAPSGKGE-----ILQPELTPNPALER------------------------ 454
+ V +DL + K E P + NPA+ R
Sbjct: 518 MEAFVDSMDLMRAEKTEEGRVPWFDPVQSYNPAVHRVKQALFHAAVVPDLSSHPLPPPHP 577
Query: 455 -FYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFV----IKENPK 509
++LE+ + ++ A P L + K A + D G + + P
Sbjct: 578 DLLYYLEMPEKVREKAKPALKECKKAFNVKPAAPKAVVKRKQDHLEGADIDMDELGLGPT 637
Query: 510 LKKSTRRFLREKPSGSDEP-NGDGSVSDAQAVNSMESKPVVTVDK--------------- 553
LKKS R +D+P NGD SV++ + E PV K
Sbjct: 638 LKKS--RSAEALDVKTDKPQNGDESVTE----DEDEELPVAATRKNGNGLQEPTPARSPS 691
Query: 554 ------IGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELL 607
IG+ P++DF + RR D + +E+ I ++ + + + +E L
Sbjct: 692 PPPVRIIGNEYPLRDFRKNVKRRG--DIISDLVEEFGQVILEIVMANFASRRHDEMIECL 749
Query: 608 VALRKGCILEQEPKQFNDVLEKVCKICRKR---NFSTFFDFLMS--KKLSLISKSEA 659
R + E E +N + K+ + C ++ N TF+ +++ + LSLIS EA
Sbjct: 750 KEYRNLALKEDEIDAWNAFMPKLKEHCTQQERPNNKTFWKLVVAEGRPLSLISDEEA 806
>gi|118375761|ref|XP_001021064.1| Ku70/Ku80 beta-barrel domain containing protein [Tetrahymena
thermophila]
gi|89302831|gb|EAS00819.1| Ku70/Ku80 beta-barrel domain containing protein [Tetrahymena
thermophila SB210]
Length = 2933
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 106/234 (45%), Gaps = 16/234 (6%)
Query: 210 FRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKA---PSTDKFATHEVKVDYEYKSVE 266
+ G ++ ++ V V+ KT E+ LK YS+ PST + V+ +Y V+
Sbjct: 1928 YNGTFQIRNELTADVVVFTKTLEKHLLNLKTYSNITEWNPSTQR---QMVEQQIQYYQVD 1984
Query: 267 DPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDV 326
D P + K Y+YG Q+V +S + K +KL+G S+I R +M
Sbjct: 1985 DILLENPVQDISKYYKYGNQLVKMSELFLNQINLFTLKEIKLIGSVQKSSIPRQSFMSGC 2044
Query: 327 NLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD 386
++ A+ + R+ +++L +A E + + R V RQ +V VL P++ + +
Sbjct: 2045 DILFAKQDSKRSRYIIASLIKACFEEQRYLVARFVLRQNSIPKLV-VLIPHLKKNC---E 2100
Query: 387 SFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGE 440
FY LP E +R++ F S + +QQ+ L+ LDL K +
Sbjct: 2101 YFYIIELPTVESIRDYSFNSLIR------STPEQQKLMSQLIDELDLDQDEKNQ 2148
>gi|330924860|ref|XP_003300810.1| hypothetical protein PTT_12162 [Pyrenophora teres f. teres 0-1]
gi|311324871|gb|EFQ91096.1| hypothetical protein PTT_12162 [Pyrenophora teres f. teres 0-1]
Length = 659
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 122/565 (21%), Positives = 218/565 (38%), Gaps = 115/565 (20%)
Query: 5 REALLLLLDVSPSMHSVLPDVE--------------KLCSRLIQKKLIYGKNHEVGVILF 50
++A+L +DVSPSM P + K +L+Q+++I N +G++LF
Sbjct: 28 KDAVLFAIDVSPSMLQQPPKSDNKKAERDSPTSAALKCAYQLMQQRIISNPNDMMGILLF 87
Query: 51 GTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL--------------PQGTCAG 96
GTE+T+ + +EH +L D+ V V+ L+ L G
Sbjct: 88 GTEKTD--MGDGDNAFEHCYLLADLDVPSAQDVKRLRDLVDNEEEAEEILKPAKGGASIS 145
Query: 97 DYMLIKKYGETYKG----KKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGL---- 148
+ + T K + L L+TD P+K V +D T AR + G
Sbjct: 146 NVLFCANQIFTTKAPNFSSRRLFLVTDNDYPVK---VKADKDTAVTRARDLYDLGCTIDL 202
Query: 149 -------------RMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSL 195
R + +V + +P V I + + + S + S S
Sbjct: 203 FPISQPDHSFDRSRFYDDLVYPTSPSDPDAPVAIPSTTKVAKSGEGISLLKQLISSINSK 262
Query: 196 RGARKTRDISPVTIFRGDLELSEKMKIKV--WVYKKTGEEKFPTLKKYSDKAPSTDKFAT 253
R+ +F LEL +I V ++ K E + P +T
Sbjct: 263 ATPRRA-------LFSLPLELGPDFRIGVKGYILIKRQEHIKSCYIWVGGEKPQIATSST 315
Query: 254 HEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVK--FKPEKSVKLLGF 311
++ +D S+ + + K Y++G + + E ++ F E ++++GF
Sbjct: 316 AQIS--------DDISRNIEKAEIRKAYKFGGDAITFTPEEITQIRQCFG-EPIIRIIGF 366
Query: 312 TDASNI-LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVV 370
S++ + K + ++ +E +T SAL + + + K+ +V + R+ +
Sbjct: 367 KPLSSVPIWANTNKSIFIYPSETDYIGSTRVFSALQQKLIKSKKMGLVWFIARR-NAAPT 425
Query: 371 VGVLTPNVSEKIN------IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAA 424
+ L P +EKIN +P + LPFA+D+R QFP+ P EQ +
Sbjct: 426 LAALIPG-AEKINGDGEQTMPPGLWLVPLPFADDIR--QFPT---------PPEQPLKTT 473
Query: 425 DNLVKMLDLA------PSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLK 478
D L + L P G I P PNP L+ FY L+ + ++ P D ++
Sbjct: 474 DALTDKMRLIIEQLQLPKG---IYDPSKYPNPDLQWFYRILQALALEEELPDHPDDKTIP 530
Query: 479 KITEPDPTLLAESQSAIDAFCGQFV 503
+ + ID CG+++
Sbjct: 531 RYKQ------------IDKRCGEYI 543
>gi|189209548|ref|XP_001941106.1| Ku domain containing protein Pku70 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187977199|gb|EDU43825.1| Ku domain containing protein Pku70 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 655
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 121/565 (21%), Positives = 218/565 (38%), Gaps = 115/565 (20%)
Query: 5 REALLLLLDVSPSMHSVLPDVE--------------KLCSRLIQKKLIYGKNHEVGVILF 50
++A+L +DVSPSM P + K +L+Q+++I N +G++LF
Sbjct: 24 KDAVLFAIDVSPSMLQKPPKSDDKKAERDSPTSAALKCAYQLMQQRIISNPNDMMGILLF 83
Query: 51 GTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL--------------PQGTCAG 96
GTE+T+ + +EH +L D+ V V+ L+ + G
Sbjct: 84 GTEKTD--VGDGDNAFEHCYLLADLDVPSAQDVKRLRDMVDNEEEAEEILKPAKGGASIS 141
Query: 97 DYMLIKKYGETYKG----KKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGL---- 148
+ + T K + L L+TD P+K + +D T AR + G
Sbjct: 142 NVLFCANQIFTTKAPNFSSRRLFLVTDNDYPVK---IKADKDTAVTRARDLYDLGCTIDL 198
Query: 149 -------------RMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSL 195
R + +V + +P V I + + + + S + S S
Sbjct: 199 FPISQPDHSFDRSRFYDDLVYPTSPSDPDAPVAISSTSKVAKSGEGISLLKQLISSINSK 258
Query: 196 RGARKTRDISPVTIFRGDLELSEKMKIKV--WVYKKTGEEKFPTLKKYSDKAPSTDKFAT 253
R+ +F LEL +I V ++ K E + P +T
Sbjct: 259 ATPRRA-------LFSLPLELGPDFRISVKGYILIKRQEHIKSCYVWVGGEKPQIATSST 311
Query: 254 HEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVK--FKPEKSVKLLGF 311
++ +D S+ + + K Y++G + + E ++ F E ++++GF
Sbjct: 312 TQIS--------DDISRNIEKTELRKAYKFGGDAITFTPEEITQIRQCFG-EPIIRIIGF 362
Query: 312 TDASNI-LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVV 370
S++ + K ++ +E +T SAL + + + K+ +V + R+ +
Sbjct: 363 KPLSSVPIWANTNKSTFIYPSEADYIGSTRVFSALQQKLIKSKKMGLVWFIPRR-NAAPT 421
Query: 371 VGVLTPNVSEKIN------IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAA 424
+ L P V EKIN +P + LPFA+D+R QFP+ P EQ +
Sbjct: 422 LAALIPGV-EKINEDGEQTMPPGLWLVPLPFADDIR--QFPT---------PPEQPLKTT 469
Query: 425 DNLVKMLDLA------PSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLK 478
D L + L P G I P PNP L+ FY L+ + ++ P D ++
Sbjct: 470 DALTDKMRLIIEQLQLPKG---IYDPSRYPNPDLQWFYRILQALALEEELPDHPDDKTIP 526
Query: 479 KITEPDPTLLAESQSAIDAFCGQFV 503
+ + ID CG+++
Sbjct: 527 RYKQ------------IDKRCGEYI 539
>gi|254585085|ref|XP_002498110.1| ZYRO0G02486p [Zygosaccharomyces rouxii]
gi|238941004|emb|CAR29177.1| ZYRO0G02486p [Zygosaccharomyces rouxii]
Length = 615
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 107/251 (42%), Gaps = 29/251 (11%)
Query: 204 ISPVTIFRGDLELSEKMKIKVWVYKKTGE-------EKFPTLKKYSD-------KAPSTD 249
+ PV +F G+L L + + + E E +P K S K
Sbjct: 213 VRPVMVFSGELRLGADVAVHTDQDSQDDEHSLTIKVEGYPATKAVSSISRKMVVKREIHG 272
Query: 250 KFATHEVKVDYEYKSVEDPSKVVP----PEQRIKGYRYGPQVVPI-SSAEWEAVKFKPEK 304
K VK EY+ D K +P P+ K YRYG V + SS E K+
Sbjct: 273 KDVYKPVKSVVEYEIQGDDEKSLPIQVSPKSIAKAYRYGADYVVLPSSLEDPPRKYASRP 332
Query: 305 SVKLLGFTDASNILRHYYMKDVNLFIAEP--GNSRATVAVSALARAMKEMNKVAIVRCVW 362
+ +LGF D + RH+ + A+ G + VA+SAL A+KE N++AIVR V
Sbjct: 333 GMDILGFIDQKALPRHFLHSESRFITADTRYGGVQDVVALSALVDALKESNQLAIVRFVA 392
Query: 363 RQGQQSVVVGVLTPNVSEKINIPD--SFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQ 420
+ V VGVL P I++ D + + LPFAED R FP + +Q
Sbjct: 393 KP-TSDVQVGVLCP-----IHVEDNHTLVYCRLPFAEDQRVSDFPRLVNRTTTSGKKIEQ 446
Query: 421 QEAADNLVKML 431
++ N+ M+
Sbjct: 447 DKSQGNIDSMM 457
>gi|71023347|ref|XP_761903.1| hypothetical protein UM05756.1 [Ustilago maydis 521]
gi|46100722|gb|EAK85955.1| hypothetical protein UM05756.1 [Ustilago maydis 521]
Length = 808
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 107/234 (45%), Gaps = 23/234 (9%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRA 338
+ ++ G ++P+ + KS+++L F +AS R Y M + A+ ++
Sbjct: 356 RAWKLGASLIPVPEESFG--NMDTHKSMEILHFFNASAYRREYNMDQIWYVFADHAQIKS 413
Query: 339 TVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAED 398
+ +S L RAM E++ +A+VR V + G + +G+L P V E + F+++ PF ED
Sbjct: 414 QLQISTLVRAMAELDVLAVVRLVRKDGAEP-ELGMLKPKVEEH---NEYFFYSKAPFRED 469
Query: 399 VREFQFPSFSKFPVSWQ---------PNEQQQEAADNLVKMLDLAPSGKGEILQPELTPN 449
+R F FP + + P+E QEA D V L+L P ++L + N
Sbjct: 470 LRRFPFPPLDRIVTTDGTELRQGPNIPDEADQEAMDAFVDSLEL-PDPWFDVLD---SYN 525
Query: 450 PALERFYHHLELKSEHQDAA--PPPLDDSLKKITEPDPTLLAESQSAIDAFCGQ 501
PA+ + + H D P P + +K + P A +Q+A C Q
Sbjct: 526 PAIHGLKTAVRQRFIHPDRNDLPGPHPELVKYLEAPSQVRTAATQAA--QMCRQ 577
>gi|392594323|gb|EIW83647.1| Ku DNA-binding complex, Ku70 subunit [Coniophora puteana RWD-64-598
SS2]
Length = 648
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 123/534 (23%), Positives = 216/534 (40%), Gaps = 101/534 (18%)
Query: 5 REALLLLLDVSPSMHSVLPD--VEKL-CSRLI----------QKKLIYGKNHEVGVILFG 51
R+ +L +D SPSM + D E + SRL+ +KK++ G N VG++LF
Sbjct: 28 RDVILFCIDCSPSMQELKEDPVYEGVQTSRLLTSLEAAMQIQKKKVLVGPNDCVGILLFN 87
Query: 52 TEETENELTKEVGGYEHVK----VLQDIKVVDGHLVQSLKHLPQGTCAGDYMLIKKY--- 104
T T +E G +K V Q + V+ +Q L L +G +L +Y
Sbjct: 88 TTRT----NEEAGYASEIKKGCFVYQQLGQVNAPKIQELIQLVEGAREDSDLLKSEYPPL 143
Query: 105 -------GETY-------------KGKKHLCLITDALCPLKDPDVGTKEDQVSTIAR--- 141
G+ + K + LITD DP GTK Q+ T AR
Sbjct: 144 EGKRVPIGDVFTSCNWVIRDNAPKTATKRVFLITDN----DDPHPGTK--QLLTSARTTL 197
Query: 142 -QMVAFGLRMKNIVV----RASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLR 196
++ G++++ + R + + V+I + + + +++ + L
Sbjct: 198 VDLIESGVQVEPFFIGTEDRPFDPTKFYSSVLINSGFDDEAEDEGTLPESISITRINDLL 257
Query: 197 GARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEV 256
+ ++ IF EL+ I V Y E+K + K + D + + V
Sbjct: 258 AQMRIHEVPKRAIFNITFELANDFVIGVKGYGLVTEQKKGSYKYFVDLGDRMEVAESRTV 317
Query: 257 KVDYEYKSVEDPSKVV-------PP-----EQRIKGYRYGPQVVPISSAEW----EAVKF 300
+D E ++ + S++V PP + + G YG +VVP + E F
Sbjct: 318 YIDEEQQAEVEKSQLVYGMELGAPPANENSDDEMDGAEYGTRVVPYGQRPFYDAEEVRSF 377
Query: 301 KP---EKSVKLLGFTDASNILRHYYMKDVNLFIAEP---GNSRATVAVSALARAMKEMNK 354
+ E +KLLGF D + + +K + SR T +A+ + M E +K
Sbjct: 378 RTLELEPGLKLLGFKDRNELAFEDNVKHSTFIYPDEQKYAGSRRT--FTAMLKVMLEKDK 435
Query: 355 VAIVRCVWRQGQQSVVVGVLTPNVSEKI-----NIPDSFYFNVLPFAEDVREFQFPSFSK 409
+ +VR + R+ V +L +EK+ N P F+ LPFA+D+R +
Sbjct: 436 IGLVRALLRKNAAPVFCAMLPQ--AEKVEEGGWNEPGGFHLIPLPFADDIRA------AP 487
Query: 410 FPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKS 463
++ ++ + AA + L + K P+ PNPAL +H+ +L++
Sbjct: 488 IEEGFRASDDVKNAARAWIDKLCV----KNGAYPPDTYPNPALA--FHNAQLQA 535
>gi|171690386|ref|XP_001910118.1| hypothetical protein [Podospora anserina S mat+]
gi|170945141|emb|CAP71252.1| unnamed protein product [Podospora anserina S mat+]
Length = 650
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 131/624 (20%), Positives = 241/624 (38%), Gaps = 106/624 (16%)
Query: 5 REALLLLLDVSPSM--------------HSVLPDVEKLCSRLIQKKLIYGKNHEVGVILF 50
++A+L +DVS SM S + K + +Q+++I +G++LF
Sbjct: 29 KDAVLFAIDVSASMLQPPPSSDDKKSDKDSAVVAALKCAHQFMQQRIIAQPKDMMGILLF 88
Query: 51 GTEET---ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDYMLIKK---- 103
GTE++ ++ ++ GY H + ++ V V+ L+ L + D +L+
Sbjct: 89 GTEKSKFRDDTGSRSGSGYPHCYLFTELDVPGAEDVKKLRDLVEEGEDADEVLVPSKEPV 148
Query: 104 --------------YGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLR 149
G + L +ITD ++P K+ + S R + L
Sbjct: 149 LMSNVLFCANQIFTTNAANFGSRRLFIITDN----ENPHGNDKQAKSSAAVRAKDLYDLG 204
Query: 150 MKNIVVRASLSGEP-----------HMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGA 198
+ + S + +P + + E DN + + +S ++S S +
Sbjct: 205 VTIELFPVSRAKKPFDLSKFYDDIVYRSSVEEGDNPEGVKTSRSGDGLTLLNSLISNINS 264
Query: 199 RKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEV-K 257
++T S + R EL+ + I V Y ++K P Y + A E K
Sbjct: 265 KQTPKRSYFS--RMPFELAPGLTITVKGYMPLHQQK-PARTCYVWLGGEQAQLAQSETTK 321
Query: 258 VDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI 317
VD E ++VE + K Y++G + + + E +++K K ++++GF +NI
Sbjct: 322 VDSEARTVEK-------SEIKKAYKFGGEYIYFTPEEAKSLKELDTKVLRIIGFKPLANI 374
Query: 318 -LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTP 376
+ K +F +E G +T SAL + + KV I V R+ V+V V+
Sbjct: 375 PMWASVKKSTFIFPSEDGYVGSTRVFSALWQKLLTSKKVGIAWYVARKNANPVMVAVIPS 434
Query: 377 NV-------SEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVK 429
S +P + LPFA+D+R + + +K P ++ + +++
Sbjct: 435 GSLNDEDEDSTAPYLPAGLWLYPLPFADDIRSVEIKTSTK------PADELTDKMREIIQ 488
Query: 430 MLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLA 489
L L + P PNPAL+ Y L+ + +D P LDD L
Sbjct: 489 NLQLPKA----TYNPLKYPNPALQWHYKILQAMALEED-VPDALDD-----------LTV 532
Query: 490 ESQSAIDAFCGQFVIKENPKLKKSTRRFLR--------------EKPSGSDEP-NGDGSV 534
ID G ++ + +L + F++ E+P + P GS
Sbjct: 533 PKYRQIDKRVGAYMAEWKQELADKAKEFMQLRATKRELEEDDAEERPRLAKRPKTAAGSA 592
Query: 535 SDAQAVNSMESKPVVTVDKIGDLT 558
S +++ E K D + LT
Sbjct: 593 SSGGQMSNAELKAAWENDTLKKLT 616
>gi|405118366|gb|AFR93140.1| damaged DNA binding protein [Cryptococcus neoformans var. grubii
H99]
Length = 799
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 99/447 (22%), Positives = 180/447 (40%), Gaps = 77/447 (17%)
Query: 278 IKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSR 337
+K +++G VP+ + + + K +++LGF NI R++ + + + + +
Sbjct: 349 VKAWKFGSTWVPVPEKTFTTMDTR--KGIEVLGFFPVENIRRYHLIGEARYVWPDLLSPK 406
Query: 338 ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSE-------KINIPDSFYF 390
A + SAL AM + A+ R V + G + +G P + K +I Y+
Sbjct: 407 AQIQFSALIEAMHDRKMCAVTRWVLKDGGEP-TLGACVPVIENKGADEEGKPSILPYMYW 465
Query: 391 NVLPFAEDVREFQFPSFSKFPVSWQ---------PNEQQQEAADNLVKMLDLAPSGKGE- 440
LPFAED R F+FPS + + P ++Q D LV +DL + E
Sbjct: 466 LKLPFAEDERTFRFPSLTTIKTNTGKILTEHPLLPTKEQSLLMDELVLGMDLDEYAREEK 525
Query: 441 -----------------------ILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSL 477
+P NP + R + S D PL
Sbjct: 526 RKTQENEGQDVDGQMDEQGQDVTWFKPWEAVNPVIHRIKEAVFHASLTPDLDKDPLGPPH 585
Query: 478 KKITE--PDPTLLAESQSAIDAFCGQFV-IKENPKLKKSTRRFLREKPSGSD-------- 526
++T+ P+ LAE + + + IK+ P+ +K RR +++ G D
Sbjct: 586 PELTKYFETPSELAEKVKDVTERLREVLDIKKVPEKRK--RRKTQKEELGEDEGFINEDE 643
Query: 527 ---EPNGDGSVSDAQAVNSMESKPVVTV---DK--------IGDLTPIQDFEAMMSRRDC 572
EP ++ + S+P + D+ I + +PI DF ++ D
Sbjct: 644 LFAEPTDTKFITKTEPHTQTPSQPTTSAPIPDQSKPKPGRLISNSSPIDDFNRVIQVGDV 703
Query: 573 PDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCK 632
KAI+DM + +E+S N+ A++ L +R + +E + +ND ++ + +
Sbjct: 704 ---FRKAIQDMNQVVKENVESSFSRQNFAAAIDCLKLMRSTALGYEEVETYNDCIDSLEQ 760
Query: 633 ICRKRNFS--TFFDFLMS--KKLSLIS 655
+ + F F+D+ S K +S IS
Sbjct: 761 TVKAKGFKHPDFWDYFKSAGKSVSKIS 787
>gi|296415193|ref|XP_002837276.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633137|emb|CAZ81467.1| unnamed protein product [Tuber melanosporum]
Length = 645
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 132/583 (22%), Positives = 229/583 (39%), Gaps = 133/583 (22%)
Query: 5 REALLLLLDVSPSM-------------------HSVLPDVEKLCSRLIQKKLIYGKNHEV 45
++A+L +DVS +M S + + ++Q ++I N +
Sbjct: 30 KDAILFAIDVSTTMLAPQELDDGDEGKRKGSTPASAVLTALRCAYGVLQSRIISNPNDMM 89
Query: 46 GVILFGTEETENELTKEVGG-----YEHVKVLQDIKVVDGHLVQSLKHL----------- 89
G++LFGTE T+ + GG YEH +L D+ + D ++ LK+L
Sbjct: 90 GILLFGTEATKFDTGGGGGGGVGGGYEHCYLLLDLDIPDAEGIKGLKNLIEDPEEFEPLL 149
Query: 90 ----PQGTCAGDYMLIKKYGETYKGK---KHLCLITDALCPLKDPDVGTKEDQVSTIARQ 142
Q + A + + + T + L ++TD P D K V T AR
Sbjct: 150 KPAKEQVSMANVFFAVNQIFTTKAANFQSRRLFIVTDEDDP-HSTDKALKNSSV-TRARD 207
Query: 143 MVAFGLRMK-------------------NIVVR----------ASLSGEPHMRVIIENDN 173
+ G+R+ +IV R A++SG+ +R ++ +
Sbjct: 208 LYDLGVRIDPFFIYNPAKGGFDSSKFYDDIVYRSPTDEEDDYHAAVSGKMRLRQMVSS-- 265
Query: 174 LLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIF--RGDLELSEKMKIKV-WVYKKT 230
I SK + + LF + ++ P I +G L + K + +VY T
Sbjct: 266 ---IKSKSTPKRALFTNKL----------ELGPGLIIGVKGYLLFKRQEKARSHYVY--T 310
Query: 231 GEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPI 290
G EK +K + E+ +KV + K Y++G + +
Sbjct: 311 GGEKAQIVKGVTTWL-------------------AEETAKVADKTEIRKAYKFGGEQILF 351
Query: 291 SSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSRATVAVSALARAM 349
+ E +A++ E ++++GF AS + +K N ++ E G +T +AL +
Sbjct: 352 TPEEMKAMRDFGEPVIRIIGFKPASAVRFDMNVKPANFIYPDETGYIGSTRVFAALHAKL 411
Query: 350 KEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN-----IPDSFYFNVLPFAEDVREFQF 404
+ KV I C+ R+ +V +L P+V E + IP F+ LPFA+DVR+
Sbjct: 412 VKDGKVGIAWCISRKNAAPQIVAIL-PSVEELGDDGVQIIPPGFFLVHLPFADDVRQNPE 470
Query: 405 PSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSE 464
+ P S + +VK L + KG I P+ NP+L+ Y L+ +
Sbjct: 471 TKLVRAPASLIDRMRA------VVKQLHMP---KGYI--PDKYSNPSLQWHYRILQAIAL 519
Query: 465 HQDAAPPPLDDSLKK---ITEPDPTLLAESQSAIDAFCGQFVI 504
+D P+D +L K I T E S ++ G I
Sbjct: 520 DEDMPAQPVDTTLPKYKLIDRHAGTYCREWGSELEKLAGNLAI 562
>gi|401883055|gb|EJT47291.1| damaged DNA binding protein [Trichosporon asahii var. asahii CBS
2479]
Length = 795
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 98/413 (23%), Positives = 172/413 (41%), Gaps = 65/413 (15%)
Query: 272 VPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIA 331
+P E+ +K +RYG +P+ +E +K +K V++LGF N + + +V
Sbjct: 355 IPKEELVKAWRYGSSWIPVEDDTFEPLKT--QKGVEVLGFIPQKNYM---LIGEVRYLWP 409
Query: 332 EPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTP--NVSEKINIPDSFY 389
+ +S+A + S+ A+ VAI R V + G +GV P ++ + D Y
Sbjct: 410 DLKSSKAQIQFSSFVSALVTTGMVAITRWVTKDGSPP-EIGVCIPKQEFGDEKRL-DLMY 467
Query: 390 FNVLPFAEDVREFQFPSFSKF-PVS--------WQPNEQQQEAADNLVKMLDL---APSG 437
+ LPFA+D F FPS + + VS + P ++Q + D LVK LDL P G
Sbjct: 468 WIRLPFADDDHRFFFPSLTNYKSVSGNEITEHPYIPTQEQSDLMDELVKGLDLDSVTPEG 527
Query: 438 -----------KGEIL------QPELTPNPALERFYH---HLELKSEHQ-DAAPPPLDDS 476
GE + P + NPA+ R H L ++ + D PP +
Sbjct: 528 ATQQDDEDEDEDGEPILHSPWYDPAFSYNPAIHRTKQAILHASLTADTKADPLGPPHPEL 587
Query: 477 LKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSD 536
K P+ L+ +++ + IK+ ++++ R+ ++ + P +VS
Sbjct: 588 TKYFYTPE-KLVEQTEKITERLKDALDIKKVTRVQRKKRQIDIDELFDNPGPGKTETVSP 646
Query: 537 A--QAVNSMESKPVVTVDK-----------------IGDLTPIQDFEAMMSRRDCPDWVD 577
A + ++ KP D I +L P++DF+ + + D
Sbjct: 647 AKPKVAADVDKKPDFADDPDFILPPSADAKPKPGRLISNLRPLEDFKRVTASGDV---FK 703
Query: 578 KAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKV 630
KAI+DM + + S +P A+ L R ++ +E + LEK
Sbjct: 704 KAIQDMGVVVEENVATSFSKQAFPDAIACLEEARSTALMYEETETIVKNLEKA 756
>gi|242022021|ref|XP_002431440.1| ku P80 DNA helicase, putative [Pediculus humanus corporis]
gi|212516728|gb|EEB18702.1| ku P80 DNA helicase, putative [Pediculus humanus corporis]
Length = 569
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 132/274 (48%), Gaps = 40/274 (14%)
Query: 198 ARKTRDISPVTIFRGDLELSEKMKIKVWVYKKT---GEEKFPT--LKKYSDKA------- 245
RK+R +P + L++ + +KI + +YKKT +KF T LK D
Sbjct: 34 TRKSRRKTP---WNSILDIGD-VKISISMYKKTDPKNSKKFDTKYLKSNDDDGDDNPTQN 89
Query: 246 --PSTDKFATHEVK---VDYEYKSVEDPSKV---VPPEQRIKGYRYGPQVVPISSAEWEA 297
PS + V+ ++Y+ +SV++ + + + I+GYRYG V+P S +
Sbjct: 90 YEPSQNSQTVPVVRDKILNYKPESVKNKELMDVEISEDDTIEGYRYGTTVIPYSRDDKTI 149
Query: 298 VKFKP-EKSVKLLGFTDASNILRHYYMKDVNLFI-AEPGNSRATVAVSALARAMKEMNKV 355
+++KP KS+ ++GFT+ S++ + + + + + A +A+SA+ +AMK+M V
Sbjct: 150 MEYKPGRKSLSVIGFTNMSSVPYYLLSGECSYVVTGRDKDENAEIALSAIVQAMKQMECV 209
Query: 356 AIVRCVWRQGQQSVVVGVLTPNVSE-----------KINIPDSFYFNVLPFAEDVREFQF 404
IVR V+ + + +G+L P V E + + F L F E+++ F
Sbjct: 210 GIVRKVYSD-DRGLSLGILYPFVEEIYSNDNDDDDGDVFSKECLLFVELAFQEEMKSIDF 268
Query: 405 PSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGK 438
PS + N Q +A D+L+ +DL + K
Sbjct: 269 PSLENLTNNITKN--QLDAIDDLIDSMDLMNAEK 300
>gi|392576409|gb|EIW69540.1| hypothetical protein TREMEDRAFT_71662 [Tremella mesenterica DSM
1558]
Length = 846
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 108/472 (22%), Positives = 185/472 (39%), Gaps = 95/472 (20%)
Query: 270 KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKP---EKSVKLLGFTDASNILRHYYMKDV 326
++V E +K +++G VP+ EA F+P K V++LGF I RH M +V
Sbjct: 380 EMVAKEDIVKAWKFGSTWVPM-----EADTFEPLNTTKGVEILGFFPREAIKRHLLMGEV 434
Query: 327 NLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIP- 385
+ + +A + S+L M A+VR V + Q ++G P + N P
Sbjct: 435 RFIWPDLTSPKAQLQFSSLVEGMYLREMCAVVRWVLKD-QSDPIIGACVP----EFNYPG 489
Query: 386 -----DSFYFNVLPFAEDVREFQFPSFSKFPVSWQ---------PNEQQQEAADNLVKML 431
D ++ LPFAED F FPS + + S P + Q + D+ V+ +
Sbjct: 490 EDKRLDYMFWCQLPFAEDEHNFWFPSLTDYKTSSGKVITEHPLIPTQDQCDLMDDFVQSM 549
Query: 432 DL----------APSGKGE--------------ILQPELTPNPALER----FYHHLELKS 463
DL + GE +P NPA+ R +H +
Sbjct: 550 DLDIYARSLAKTSTLNAGEEGDEKPDLDVEVVPWFEPARAFNPAIHRIKEAIFHASLTQD 609
Query: 464 EHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENP--KLKKSTRRFLREK 521
+D PP + +K P+ + A S +K+ P + KK + LRE+
Sbjct: 610 LEKDPLGPPHPELVKYFDPPEEPIHA-SAKITTKLKEVLAVKKVPPRQRKKVVKEGLREE 668
Query: 522 ------------PSGSDEPNGDGSV---------------SDAQAVNSMESKPVVTVDK- 553
PS S +P + + + + E P K
Sbjct: 669 EGYIDIDELFDDPSLSQKPKVEPATPQKLKPEPISPLQLKAKHNESQNQEPSPRSQPKKG 728
Query: 554 --IGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALR 611
+ + TP++DF A++ D KAI+D+ + + S +P A+E L A+R
Sbjct: 729 RLVSNQTPLEDFNALIEGEG--DVFRKAIQDLGEVVKENVTASFSRSAFPLALECLKAIR 786
Query: 612 KGCILEQEPKQFNDVLEKVCKICRKRNF--STFFDFL--MSKKLSLISKSEA 659
+ + +E +N+ +E++ + + F F++ K++S IS EA
Sbjct: 787 QTALTYEEVDTYNEYIEELEEYVKAPGFKHKDFWEHFEKEGKEVSKISPEEA 838
>gi|328874182|gb|EGG22548.1| ATP-dependent DNA helicase [Dictyostelium fasciculatum]
Length = 825
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 96/188 (51%), Gaps = 23/188 (12%)
Query: 281 YRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSRAT 339
Y YG + V S E E +K + + L+GF A+ I R +K ++ LF E +T
Sbjct: 325 YYYGGEPVVFSKEEVEKIKSIDRQGMVLMGFKPANTIKRQQTIKHMSFLFPDEKTVKGST 384
Query: 340 VAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFY-----FNV-- 392
V ++AL M E+++VAI + + R G +V ++ E IN DS FNV
Sbjct: 385 VTLNALIDKMIELDRVAICKFLPRAGTLPRMVALIAQ--EEIINPKDSTQIQSRGFNVFY 442
Query: 393 LPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPAL 452
LP+A+D+R+FQF + +K NE+Q +AA ++K + + + + NP L
Sbjct: 443 LPYADDIRQFQFNTTTK------ANEKQIDAAKKIIKTFKINYNDQSFL-------NPGL 489
Query: 453 ERFYHHLE 460
++ Y+ L+
Sbjct: 490 QKHYNSLQ 497
>gi|389742273|gb|EIM83460.1| SPOC domain-like protein [Stereum hirsutum FP-91666 SS1]
Length = 866
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 124/296 (41%), Gaps = 60/296 (20%)
Query: 267 DPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDV 326
D S+ + E+ ++G++YG VP ++E ++ K + +++ F + M +V
Sbjct: 348 DLSQRIEKEELVRGFKYGSSYVPCPDGQFERLETK--RGIEICAFFKSVAFRPELAMGEV 405
Query: 327 NLFIAEPGNSRATVAVSALARAM-------------KEMNKVAIVRCVWRQGQQSVVVGV 373
A+P + VA+S++ +AM AI R + G +GV
Sbjct: 406 QYIWADPSSPNQQVAMSSIIQAMLSADKHDPKKKDKSHYPYFAIARWCNKDGSDP-KMGV 464
Query: 374 LTPNVSEKINI-------PDSFYFNVLPFAEDVREFQFPSF-----------SKFPVSWQ 415
L P SEK++ P+SF +PFA+DVR++ F +K P +
Sbjct: 465 LQPCRSEKVDYFLWVQVRPESF----MPFADDVRKYNFAPLEYLTNKRGDRVTKHP--YI 518
Query: 416 PNEQQQEAADNLVKMLDLAPSGK----GE---ILQPELTPNPALERFYHHLELKSEHQDA 468
P E Q +A DN V LDL +G+ GE P L+ NPA+ R L A
Sbjct: 519 PTEDQLDAMDNFVDALDLMNAGEKNEAGEREPWFDPRLSYNPAIHRTKQAL-----FHSA 573
Query: 469 APPPL--------DDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRR 516
P L L K E +L ++ SAI+ F +KE PK R+
Sbjct: 574 VVPDLMTHPLPPPHPELLKYFETPQRVLKKAGSAIEECKTAFNVKEVPKRAPRARK 629
>gi|451850214|gb|EMD63516.1| hypothetical protein COCSADRAFT_190760 [Cochliobolus sativus
ND90Pr]
Length = 653
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 122/555 (21%), Positives = 213/555 (38%), Gaps = 104/555 (18%)
Query: 5 REALLLLLDVSPSMHSVLPDVE--------------KLCSRLIQKKLIYGKNHEVGVILF 50
++A+L + VSPSM P E K +L+Q+++I N +G++LF
Sbjct: 30 KDAVLFAIHVSPSMLEKPPKSEDKKAERDSPASAALKCAYQLMQQRIISNPNDMMGILLF 89
Query: 51 GTEETE---NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDYMLIKKYGET 107
GT+ET+ + +V + VK L+D+ + + LK G + T
Sbjct: 90 GTKETDLKDGDTDLDVPSAQDVKRLRDMVEDEEEAEKILKPAKDGASIATVLFCANQIFT 149
Query: 108 YKG----KKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGL--------------- 148
K + L L+TD P+K +D T AR + G
Sbjct: 150 TKAPNFSSRRLFLVTDNDYPVK---AKADKDAAVTRARDLYDLGCTVDLFPISQPDHSFD 206
Query: 149 --RMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISP 206
R + +V + +P V I + + + S + S S R+
Sbjct: 207 RSRFYDDLVYPTSPSDPDAPVAIPSTTKVAKSGEGISLLKQLISSINSKATPRRA----- 261
Query: 207 VTIFRGDLELSEKMKIKVWVY---KKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYK 263
+F LEL +KI V Y K+ K + +K TH
Sbjct: 262 --LFSLPLELGPDLKIGVKGYILIKRQEHVKSCYVWVGGEKPQIVTSSTTH--------- 310
Query: 264 SVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVK--FKPEKSVKLLGFTDASNI-LRH 320
+D ++ V + K Y++G + + E ++ F E ++++GF S++ +
Sbjct: 311 MADDTARTVEKAELRKAYKFGGDAITFTPEEITKIRQCFG-EPVIRIIGFKPLSSVPIWA 369
Query: 321 YYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSE 380
K ++ +E +T SAL R + + K+ +V + R+ + + L P+ E
Sbjct: 370 NTNKSTFIYPSEADYIGSTRVFSALQRKLLKSKKMGLVWFIPRRNA-APTLAALIPS-EE 427
Query: 381 KIN------IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLA 434
K N +P + LPFA+D+R QFP+ P E+ + D L + L
Sbjct: 428 KTNEEGEQVMPPGLWLVPLPFADDIR--QFPT---------PPEEPLKTTDALTDKMRLI 476
Query: 435 ------PSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLL 488
P G I P PNP L+ FY L+ + ++ P D ++ + +
Sbjct: 477 IEQLQLPKG---IYDPSRYPNPDLQWFYRILQALALEEELPEHPDDKTIPRFKQ------ 527
Query: 489 AESQSAIDAFCGQFV 503
ID CG+++
Sbjct: 528 ------IDKRCGEYI 536
>gi|321252227|ref|XP_003192332.1| damaged DNA binding protein [Cryptococcus gattii WM276]
gi|317458800|gb|ADV20545.1| Damaged DNA binding protein, putative [Cryptococcus gattii WM276]
Length = 839
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 101/459 (22%), Positives = 183/459 (39%), Gaps = 92/459 (20%)
Query: 275 EQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 334
E +K +++G VP+ + + + K +++LGF NI R++ + + +
Sbjct: 391 EDVVKAWKFGSTWVPVPEKTFATLATR--KGIEVLGFFPVENIRRYHLIGEARYVWPDLL 448
Query: 335 NSRATVAVSALARAMKEMNKVAIVRCVW--RQGQQSVVVGVLTPNVSEK-------INIP 385
+ +A + SAL AM + R +W + G + + G P + K N+
Sbjct: 449 SPKAQIQFSALVEAMHD-------RKIWVLKDGGEPTL-GACVPVIENKGTDEEGRPNVL 500
Query: 386 DSFYFNVLPFAEDVREFQFPSFSKFPVS---------WQPNEQQQEAADNLVKMLDLAPS 436
Y+ LPFAED R F+FPS + + P ++Q D LV +DL
Sbjct: 501 PYMYWLKLPFAEDERIFRFPSLATIKTNTGKILTEHPLLPTKEQSLLMDELVLGMDLDEY 560
Query: 437 GK------------------------GEILQPELTPNPALERFYHHLELKSEHQDAAPPP 472
+ G +P NP + R + S D P
Sbjct: 561 AREEKRKAQEDEEQDVDEQMDDQDQDGTWFKPWEAVNPVIHRIREAIFHASLTPDLDEDP 620
Query: 473 LDDSLKKITE--PDPTLLAESQSAIDAFCGQFV-IKENPKLKKSTRRFLREKPSGSDEPN 529
L ++T+ P LAE + + + IK+ P+ +K RR ++++ G DE
Sbjct: 621 LGPPHPELTKYFETPAELAEKVEDVTERLKEILDIKKVPEKRK--RRKVQKEELGEDEGF 678
Query: 530 GDGSVSDAQAVNSMESKPVVTVDK-------------------------IGDLTPIQDFE 564
D D E+KP++ + I + +PI DF+
Sbjct: 679 ID---EDELFAEPTETKPIIKPEPQSQTSSQPTTSTPIPDQNKPKSGRLISNGSPIDDFK 735
Query: 565 AMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFN 624
++ D KAI+DM + +++S N+ A++ L +R + +E + +N
Sbjct: 736 RVIQVGDV---FRKAIQDMNEVVKENVKSSFSRQNFTGAIDCLKLMRSTALGYEEVETYN 792
Query: 625 DVLEKVCKICRKRNFS--TFFDFLMS--KKLSLISKSEA 659
D ++ + + + + F F+D+ S K +S IS+ EA
Sbjct: 793 DCIDSLEQTVKAKGFKHPDFWDYFKSAGKSVSKISEEEA 831
>gi|302845110|ref|XP_002954094.1| hypothetical protein VOLCADRAFT_118635 [Volvox carteri f.
nagariensis]
gi|300260593|gb|EFJ44811.1| hypothetical protein VOLCADRAFT_118635 [Volvox carteri f.
nagariensis]
Length = 1066
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 79/138 (57%), Gaps = 13/138 (9%)
Query: 278 IKGYRYGPQVVPIS--------SAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLF 329
+KG+ YG Q VPI+ + + + KF+ EK LLGF +A ++ H + + ++
Sbjct: 517 VKGFSYGKQAVPIAQYTDEQAHAMDEQMRKFR-EKDFSLLGFVNAGSVPHHRLIDEPHVV 575
Query: 330 IAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFY 389
+ + +S A +A AL +KE + +VR + R+ +S +G+LTP++S ++P +
Sbjct: 576 LGDSPSSAAVIAALALV--LKERGQAGVVRFLIRK--ESPQLGLLTPHLSNSPDVPHALL 631
Query: 390 FNVLPFAEDVREFQFPSF 407
+ LPFAED+R + F +F
Sbjct: 632 LSPLPFAEDIRTYTFSTF 649
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 119/278 (42%), Gaps = 40/278 (14%)
Query: 415 QPNEQQQEAADNLVKMLDLAPS-----GKG--------EILQPELTPNPALERFYHHLEL 461
QP+++QQ+AA LV+ LDL PS G G E L PE T NP L+R Y +
Sbjct: 726 QPDDEQQDAALALVRGLDLGPSPLLGIGGGCATREPHPEALAPEATANPVLQRVYTLVTS 785
Query: 462 KSEHQDAA-PPPLDDSLKKIT-EPD-----PTLLAESQSAIDAFCGQFVIKENPKLKKST 514
++ A P P D L ++ +P P + A + + + +P+ K
Sbjct: 786 RALDPTAQLPDPEGDPLVELVLQPHGRYWPPGAREALRRAEEKLRTRDRVPGSPRASKRA 845
Query: 515 RRFLREKPSGSDEPNGDGSVSDAQAVNSMESKPVVT--------------VDKIGDLTPI 560
R + G + D + + Q S + PV V ++ +L+ +
Sbjct: 846 RL----EQEGGGQGAEDAAAAAGQLSESAAAAPVTVLFDPTAAGGTAAARVGRVAELSAV 901
Query: 561 QDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEP 620
+DF AMM++ D +A+ M+ + L+ S Y KA++ L ALR GC
Sbjct: 902 EDFTAMMAQGR--DSAMEAVRQMQELVQVLVGRSIGDQLYGKALKCLEALRAGCTATGRA 959
Query: 621 KQFNDVLEKVCKICRKRNFSTFFDFLMSKKLSLISKSE 658
FN L+ + CR + F + ++ +SLI+ +
Sbjct: 960 GAFNRFLQGFVEWCRSEDRGAFVSEMATQGISLITAED 997
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 18 MHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENEL--TKEVGGYEHVKVLQDI 75
M LP + +L ++ KL+ NHEV V+L+GT+ T ++L + Y HV VL+ +
Sbjct: 114 MQPYLPLLHRLVFHVLNVKLLSKPNHEVAVVLYGTKGTRHKLYDASDPLSYHHVTVLRPL 173
Query: 76 KVVDGHL 82
+ + +L
Sbjct: 174 QNLGSYL 180
>gi|164656268|ref|XP_001729262.1| hypothetical protein MGL_3729 [Malassezia globosa CBS 7966]
gi|159103152|gb|EDP42048.1| hypothetical protein MGL_3729 [Malassezia globosa CBS 7966]
Length = 539
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 104/254 (40%), Gaps = 26/254 (10%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRA 338
+ Y+ G +VP+ +A E +++L F AS R Y+M + IA P + RA
Sbjct: 137 RAYKLGASLVPLENAP---PALPTEAGLEILHFVSASTYRREYHMGETYYVIAHPSSKRA 193
Query: 339 TVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAED 398
VA+S+L +A A+ R V R + +L P + + D+FY +PF +D
Sbjct: 194 QVALSSLVQAAAVKGVYALCRLVTRPNADPKLC-ILAPLIESEY---DAFYLVHVPFRDD 249
Query: 399 VREFQFPSFSKFPVSWQ---------PNEQQQEAADNLV-------KMLDLAPSGKGEIL 442
V+ FP + S P +QQ D V + P G
Sbjct: 250 VKRVAFPPLDRVMTSTGASIFEHPTIPTNEQQSTMDAFVDQMDLMDMDDEGDPEG---WY 306
Query: 443 QPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQF 502
P L+ +PA+ + ++ + + A PL SL++ + ++ A DA F
Sbjct: 307 TPTLSYHPAIHGLKNAIKWRYLYPQAPLLPLHASLQRFLHVPRRVEERARPARDACAAAF 366
Query: 503 VIKENPKLKKSTRR 516
+ P L + +R
Sbjct: 367 GVHVPPSLVPTAKR 380
>gi|403345721|gb|EJY72241.1| Ku P70 DNA helicase [Oxytricha trifallax]
Length = 817
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 113/536 (21%), Positives = 223/536 (41%), Gaps = 95/536 (17%)
Query: 1 MARTREALLLLLDVSPSMHSVLP--------DVEKL---CSRLIQKKLIYGKNHEVGVIL 49
M + R++++ L+D SMH P +V+++ C ++ K+I N ++G++L
Sbjct: 37 MKQNRDSVVFLIDCHRSMHEKNPHNGDGDPSNVQQILDACLSFMKTKIITSDNDKIGIVL 96
Query: 50 FGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLK-----------HLPQGT----- 93
+G ++T N+L + ++ V Q + D ++ L+ +P+ T
Sbjct: 97 YGCKQTNNQLN-----FNNIYVFQKLDSPDAQSIKQLETKMQDFTKQYGFVPKETHTPLF 151
Query: 94 -----CAGDYMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGL 148
C ++ +++K ++Y K + L T+ P D D G + + A + + G+
Sbjct: 152 EALWICHQEFKVVEK--QSY--NKRIFLFTNEDNPGNDNDKGMAQQR----ANDLSSLGV 203
Query: 149 RMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTS----LRGARKTRDI 204
++ + + P V N++ ++ ++ L + T S L + ++
Sbjct: 204 DIELFPMPKAQQQRPVFDVKKFYANIIQFDEEEQFSEMLGIQGTQSRISELMKRIRMKEF 263
Query: 205 SPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKY----SDKAPSTDKFATHEVKVDY 260
T + L+ K +I + Y K PT K + + ST +F
Sbjct: 264 RKRTQGKCLFSLTPKAQIALSFYTTVMPTKKPTAAKVNAVNNKQLRSTQRFI-------- 315
Query: 261 EYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI--- 317
+D V+ Q Y G + V I+ + + +KF +KL+GF S +
Sbjct: 316 ----CQDTGSVLYKNQIANHYPVGGEKVNITQDDVKQIKFFDNVGMKLMGFKPRSALKVF 371
Query: 318 --LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVV-VGVL 374
++H Y ++ E + ++ + AL M +K+AIVR + R SVV L
Sbjct: 372 HNIKHSYF----IYPDEKRITGSSQVMDALINEMISDDKIAIVRFIPRDN--SVVRFCAL 425
Query: 375 TPNVSEKIN------IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAA--DN 426
P EK++ P F LP+A+D+R+ + F + E ++E + DN
Sbjct: 426 VPQ-KEKVDDEDGFQTPPGFQLIFLPYADDIRDIN----AIFDAAGYGEEIKEEESIFDN 480
Query: 427 LVKMLDLAPSGKGEILQPELTP----NPALERFYHHLELKSEHQDAAPPPLDDSLK 478
L A + + + NP+L++FY L+ + ++D P ++D L+
Sbjct: 481 LTNEEKHAAKLMVKNMYIDFNSRNFDNPSLQQFYAGLQALALNED-KPEQVEDHLQ 535
>gi|396479528|ref|XP_003840776.1| similar to TPA: ATP-dependent DNA helicase II subunit 1 (EC
3.6.1.-)(ATP-dependent DNA helicase II subunit Ku70)
[Leptosphaeria maculans JN3]
gi|312217349|emb|CBX97297.1| similar to TPA: ATP-dependent DNA helicase II subunit 1 (EC
3.6.1.-)(ATP-dependent DNA helicase II subunit Ku70)
[Leptosphaeria maculans JN3]
Length = 654
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 117/560 (20%), Positives = 215/560 (38%), Gaps = 105/560 (18%)
Query: 5 REALLLLLDVSPSMHSVLPDVE--------------KLCSRLIQKKLIYGKNHEVGVILF 50
++A+L +DVSP+M P E K +L+Q+++I N +G++LF
Sbjct: 29 KDAVLFAIDVSPTMLERPPKSEDKKADRDSPTSAALKCAYQLMQQRIISNPNDMMGILLF 88
Query: 51 GTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDYMLIKKYGETYK- 109
GTE+T+ L ++H +L D+ V V+SL+ L + + +L K E Y
Sbjct: 89 GTEQTD--LKDGDSTFQHCYLLADLDVPSAQDVKSLRDLVEDEEEAEKIL-KPAKEGYSI 145
Query: 110 ------------------GKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGL--- 148
+ L L+TD P K + +D T AR + G
Sbjct: 146 STVLFCANQIFTTKAPNFSSRRLFLVTDNDYPAK---IKADKDTAVTRARDLYDLGCTID 202
Query: 149 --------------RMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTS 194
R + +V + +P + + + + + S + S S
Sbjct: 203 LFPISQPGHTFDRSRFYDDLVYPTSPSDPDAPISLASTTKIAKSGEGISLLKQLISSINS 262
Query: 195 LRGARKTRDISPVTIFRGDLELSEKMKIKV--WVYKKTGEEKFPTLKKYSDKAPSTDKFA 252
R+ +F LEL +I V +V K E + P +
Sbjct: 263 KATPRRA-------LFTLPLELGPDFRIGVKGYVLIKRQEHVKSCYVWVGGEKPQIATSS 315
Query: 253 THEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVK--FKPEKSVKLLG 310
T + +D ++ + + K Y++G + + + E ++ F + ++++G
Sbjct: 316 TSHL--------ADDSARTIEKTELQKAYKFGGEAITFTPEEITKIRQCFG-DPVIRIIG 366
Query: 311 FTDASNI-LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSV 369
F S + L K L+ +E +T +AL + + + K+ +V + R+ S
Sbjct: 367 FKPISCLPLWANVNKATFLYPSEVDYIGSTRVFAALQQKLLKSQKMGLVWFIARRNA-SP 425
Query: 370 VVGVLTPNVSEKIN------IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEA 423
+ L P+ EK+N P + LPFA+D+R+F P S P E
Sbjct: 426 ALCALIPS-EEKLNADGEQTTPPGLWLIPLPFADDLRQFPEPPDS-------PLRTTNEL 477
Query: 424 ADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEP 483
D + +++ KG + P PNP L+ FY L+ + + P D ++ + +
Sbjct: 478 TDKMRLIIEQLQLPKG-MYDPSKYPNPNLQWFYRVLQALALEDEIPEKPDDKTIPRYKQ- 535
Query: 484 DPTLLAESQSAIDAFCGQFV 503
ID CG+++
Sbjct: 536 -----------IDKRCGEYI 544
>gi|281203277|gb|EFA77477.1| hypothetical protein PPL_12079 [Polysphondylium pallidum PN500]
Length = 180
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 70/123 (56%), Gaps = 17/123 (13%)
Query: 551 VDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVAL 610
V+++G + +Q+F+ M++RRD D VDKAI MK +I L+ +S + Y KA+E +V L
Sbjct: 47 VNEVGSINQVQNFKDMLARRDI-DLVDKAISLMKQRIVQLVNDSLKDQFYQKALECVVEL 105
Query: 611 RKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKKLSLISKSEAVDSDITDDEAG 670
R+G I E E +D F+ +++ ++ LI+ E+ DS+IT+ E+
Sbjct: 106 RRGSIKESESLNRDD----------------FWQLIVTNQIGLITNDESDDSEITEKESK 149
Query: 671 SFI 673
F+
Sbjct: 150 EFL 152
>gi|324505212|gb|ADY42245.1| X-ray repair cross-complementing protein 5 [Ascaris suum]
Length = 338
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 85/184 (46%), Gaps = 23/184 (12%)
Query: 214 LELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVK--VDYEYKSVEDPSKV 271
LEL E +K+ + ++KK E P +K K D+ EVK YE +D S+
Sbjct: 149 LELGEDIKLPLQLFKKNQE---PDMKMNFAK---IDQTTGAEVKRQTIYERPIGDDSSQS 202
Query: 272 VPP------------EQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNIL 318
P E IKGY +G +VP + + + +K E + +KLL F S IL
Sbjct: 203 ATPNANASGPKILRKEDVIKGYTFGATIVPFNEEDQKEYGWKRESRCMKLLQFAKRSEIL 262
Query: 319 RHYYMKDVNLFIAEPGNSR-ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPN 377
HY M + P N + AVSAL RAM E + VA+VR V+ ++ L P
Sbjct: 263 EHYLMDGGVYYCLPPANDQEGATAVSALVRAMLEEDCVALVRYVYNAASLPRIM-ALFPR 321
Query: 378 VSEK 381
+S K
Sbjct: 322 ISNK 325
>gi|451993350|gb|EMD85824.1| hypothetical protein COCHEDRAFT_1198766 [Cochliobolus
heterostrophus C5]
Length = 782
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 120/566 (21%), Positives = 213/566 (37%), Gaps = 117/566 (20%)
Query: 5 REALLLLLDVSPSMHSVLPDVE--------------KLCSRLIQKKLIYGKNHEVGVILF 50
++A+L + VSPSM P E K +L+Q+++I N +G++LF
Sbjct: 30 KDAVLFAIHVSPSMLEKPPKSEDKKAERDSPTSAALKCAYQLMQQRIISNPNDMMGILLF 89
Query: 51 GTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ--------------GTCAG 96
GTEET+ L ++H +L D+ V V+ L+ + + G
Sbjct: 90 GTEETD--LKDGDNTFQHCYLLADLDVPSAQDVKRLRDMVEDEEEAEKILKPAKDGASIA 147
Query: 97 DYMLIKKYGETYKG----KKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGL---- 148
+ T K + L L+TD P+K +D T AR + G
Sbjct: 148 TVLFCANQIFTTKAPNFSSRRLFLVTDNDYPVK---AKADKDAAVTRARDLYDLGCTIDL 204
Query: 149 -------------RMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSL 195
R + +V + +P V I + + + S + S S
Sbjct: 205 FPISQPDHNFDRSRFYDDLVYPTSPSDPDAPVAIPSTTKVAKSGEGISLLKQLISSINSK 264
Query: 196 RGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHE 255
R+ +F LEL ++I V Y L K + S + E
Sbjct: 265 ATPRRA-------LFSLPLELGPDLRIGVKGY---------ILIKRQEHVKSCYVWVGGE 308
Query: 256 ---VKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVK--FKPEKSVKLLG 310
+ +D +++V + K Y++G + + E ++ F + ++++G
Sbjct: 309 KPQIVTSSTAHMADDTAQIVEKAELRKAYKFGGDAITFTPEEITKIRQCFG-QPVIRIIG 367
Query: 311 FTDASNI-LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSV 369
F S++ + K ++ +E +T SAL R + + K+ +V + R+ +
Sbjct: 368 FKPLSSVPIWANTNKSTFIYPSEADYIGSTRVFSALQRKLLKSKKMGLVWFIPRRNA-AP 426
Query: 370 VVGVLTPNVSEKIN------IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEA 423
+ L P EK N +P + LPFA+D+R QFP+ P E+ +
Sbjct: 427 TLAALIPG-EEKTNEEGEQVMPPGLWLIPLPFADDIR--QFPT---------PPEEPLKT 474
Query: 424 ADNLVKMLDLA------PSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSL 477
D L + L P G I P PNP L+ FY L+ + ++ P D ++
Sbjct: 475 TDVLTDKMRLIIEQLQLPKG---IYDPSRYPNPDLQWFYRILQALALEEELPDHPEDKTI 531
Query: 478 KKITEPDPTLLAESQSAIDAFCGQFV 503
+ + ID CG+++
Sbjct: 532 PRFKQ------------IDKRCGEYI 545
>gi|161789038|sp|Q7SA95.2|KU70_NEUCR RecName: Full=ATP-dependent DNA helicase II subunit 1; AltName:
Full=ATP-dependent DNA helicase II subunit Ku70;
AltName: Full=Protein mus-51
Length = 645
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 116/542 (21%), Positives = 215/542 (39%), Gaps = 115/542 (21%)
Query: 5 REALLLLLDVSPSM--------------HSVLPDVEKLCSRLIQKKLIYGKNHEVGVILF 50
++A+L +DVS SM S L +++Q+++I +GV+LF
Sbjct: 29 KDAVLFAIDVSKSMLKPPQNTGDKKADKDSALTAALTCAYQIMQQRIISQPKDMMGVLLF 88
Query: 51 GTEETENELTKEVG-GYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDYMLIKK------ 103
GTE+++ G GY H +L D+ + V+ LK L + D +++
Sbjct: 89 GTEKSKFRDDSGNGTGYPHCYLLSDLDIPGAEDVKKLKALIEDGDDEDEIMVPSKEPVIM 148
Query: 104 ------------YGETYKGKKHLCLITDALCPLKDPDVGTKEDQVST------------- 138
G + L ++TD DP G K+ + S
Sbjct: 149 SNMLFCANQVFTTNAANFGSRRLFIVTDN----DDPHAGDKQAKSSAAVRAKDLYDLGVV 204
Query: 139 -----IARQMVAFGLR-------MKNIVVRASLSGEPHMR-----VIIENDNLLNIFSKK 181
I+R+ F L +N A S P + + N + NI SK+
Sbjct: 205 IELFPISREDKKFDLSKFYDDIIYRNPAAEAGQSESPKTSKSGDGLTLLNSLISNINSKQ 264
Query: 182 SSAKTLFVDSTTSLRGARKTRDISPVTI-FRGDLELSEKMKIK-VWVYKKTGEEKFPTLK 239
+ ++ F + L +TI +G + L+ + + +VY+ GEE+ ++
Sbjct: 265 TPKRSYFSNLPFELAPG--------LTISIKGYMPLNRQTPTRSCYVYE--GEEQAQVVQ 314
Query: 240 KYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVK 299
+ +VD+ ++VE + KGY++G + + E +K
Sbjct: 315 -------------SETAQVDFAARTVEK-------SELRKGYKFGGEHICFKPEELAELK 354
Query: 300 FKPEKSVKLLGFTDASNILRHYYM-KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIV 358
+K+++++GF S I + K + +F +E +T SAL + + + +KV I
Sbjct: 355 QMGKKTLRIIGFKKRSKIPSWASVKKSIFIFPSEEQYVGSTRVFSALWQKLLKDDKVGIA 414
Query: 359 RCVWRQGQQSVVVGVL---TPNVSEKIN--IPDSFYFNVLPFAEDVREFQFPSFSKFPVS 413
V R+ V+V + P+ E +P + LPFA+DVR S
Sbjct: 415 WFVARENAHPVMVAIFPSGNPDDEEANTPYLPAGLWLYPLPFADDVR-----SVDHVTAP 469
Query: 414 WQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPL 473
+P ++ + +++ L L + + P PNP+L+ Y L+ K+ ++ P +
Sbjct: 470 PRPADELTDQMRQVIQNLQLPKA----MYDPRKYPNPSLQWHYKILQAKALDEE-TPDAM 524
Query: 474 DD 475
DD
Sbjct: 525 DD 526
>gi|281204870|gb|EFA79065.1| ATP-dependent DNA helicase [Polysphondylium pallidum PN500]
Length = 775
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 106/514 (20%), Positives = 208/514 (40%), Gaps = 84/514 (16%)
Query: 5 REALLLLLDVSPSMHSVLP--------DVEKLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
R+ ++ L+D S +M P + K + I K+I + +G+ L+ T++ +
Sbjct: 65 RDCIIFLIDTSKAMFEPDPVTKEKPFDNAIKCLIQTITDKIITSDSDLIGLCLYNTDKNK 124
Query: 57 NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDYMLIKKYGETYK------- 109
N + +E++ VL D+ + D + L+ + +G DY Y E
Sbjct: 125 N-----LNDFENIYVLFDLDIPDPKTILLLEDILEG----DYSSFGGYTENKDMVFCDAL 175
Query: 110 --------------GKKHLCLITDALCPLKDPDVGTKEDQVSTI--ARQMVAFGLRMKNI 153
K + L T+ P +D D +V I A+ + G+ ++
Sbjct: 176 WTCSTMFSNCNIKLSHKRIFLFTNQDQPTQDND----NQKVIAIQRAKDLSDLGIEIELF 231
Query: 154 VVRASLSGEP-------HMRVIIENDNLLNI-FSKKSSAKTLFVDSTTSLRGARKTRDIS 205
+ +LS P +I+++D +++ FS S LF + R K R +
Sbjct: 232 SMNNALSDHPFDFSLFYQEIIILQDDQIVDQDFSSASRFSQLF---SKLKRKQFKKRSLG 288
Query: 206 PVTIFRG-DLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKS 264
+ ++ G D+ + ++ V ++ PT+ + P +K +
Sbjct: 289 QLPMYIGKDVVIGTQLYSLVSAATRSS----PTMLDPASNLP---------IKTLTKNIC 335
Query: 265 VEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNIL-RHYYM 323
+ + ++P + Y YG + V E ++++ + LLGF + L RH +
Sbjct: 336 MSSGTTLLPSQIAYCMY-YGGEPVVFEKREVDSIRSLDRVGLTLLGFKPSKAALKRHRLV 394
Query: 324 KDVN-LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKI 382
K N LF E + +T A++AL AM ++VAI + + R +V ++ E +
Sbjct: 395 KHSNFLFPDEKSITGSTRALNALLDAMLSSDRVAIAKFLPRSNTSPRMVALVPQEEDEDL 454
Query: 383 NIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEIL 442
+P F+ LP+A+D+R Q + Q + A ++K +
Sbjct: 455 RMPRGFHIIYLPYADDIRAIQVEQSESTATT-----NQIDCAKQVIKAYHID-------Y 502
Query: 443 QPELTPNPALERFYHHLELKSEHQDAAPPPLDDS 476
P NPAL++ Y +L+ + +D+ P D++
Sbjct: 503 NPADFLNPALQKHYANLQALALERDSVAPTTDNT 536
>gi|164423551|ref|XP_962503.2| hypothetical protein NCU08290 [Neurospora crassa OR74A]
gi|157070143|gb|EAA33267.2| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 647
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 116/542 (21%), Positives = 215/542 (39%), Gaps = 115/542 (21%)
Query: 5 REALLLLLDVSPSM--------------HSVLPDVEKLCSRLIQKKLIYGKNHEVGVILF 50
++A+L +DVS SM S L +++Q+++I +GV+LF
Sbjct: 31 KDAVLFAIDVSKSMLKPPQNTGDKKADKDSALTAALTCAYQIMQQRIISQPKDMMGVLLF 90
Query: 51 GTEETENELTKEVG-GYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDYMLIKK------ 103
GTE+++ G GY H +L D+ + V+ LK L + D +++
Sbjct: 91 GTEKSKFRDDSGNGTGYPHCYLLSDLDIPGAEDVKKLKALIEDGDDEDEIMVPSKEPVIM 150
Query: 104 ------------YGETYKGKKHLCLITDALCPLKDPDVGTKEDQVST------------- 138
G + L ++TD DP G K+ + S
Sbjct: 151 SNMLFCANQVFTTNAANFGSRRLFIVTDN----DDPHAGDKQAKSSAAVRAKDLYDLGVV 206
Query: 139 -----IARQMVAFGLR-------MKNIVVRASLSGEPHMR-----VIIENDNLLNIFSKK 181
I+R+ F L +N A S P + + N + NI SK+
Sbjct: 207 IELFPISREDKKFDLSKFYDDIIYRNPAAEAGQSESPKTSKSGDGLTLLNSLISNINSKQ 266
Query: 182 SSAKTLFVDSTTSLRGARKTRDISPVTI-FRGDLELSEKMKIK-VWVYKKTGEEKFPTLK 239
+ ++ F + L +TI +G + L+ + + +VY+ GEE+ ++
Sbjct: 267 TPKRSYFSNLPFELAPG--------LTISIKGYMPLNRQTPTRSCYVYE--GEEQAQVVQ 316
Query: 240 KYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVK 299
+ +VD+ ++VE + KGY++G + + E +K
Sbjct: 317 -------------SETAQVDFAARTVEK-------SELRKGYKFGGEHICFKPEELAELK 356
Query: 300 FKPEKSVKLLGFTDASNILRHYYM-KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIV 358
+K+++++GF S I + K + +F +E +T SAL + + + +KV I
Sbjct: 357 QMGKKTLRIIGFKKRSKIPSWASVKKSIFIFPSEEQYVGSTRVFSALWQKLLKDDKVGIA 416
Query: 359 RCVWRQGQQSVVVGVL---TPNVSEKIN--IPDSFYFNVLPFAEDVREFQFPSFSKFPVS 413
V R+ V+V + P+ E +P + LPFA+DVR S
Sbjct: 417 WFVARENAHPVMVAIFPSGNPDDEEANTPYLPAGLWLYPLPFADDVR-----SVDHVTAP 471
Query: 414 WQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPL 473
+P ++ + +++ L L + + P PNP+L+ Y L+ K+ ++ P +
Sbjct: 472 PRPADELTDQMRQVIQNLQLPKA----MYDPRKYPNPSLQWHYKILQAKALDEE-TPDAM 526
Query: 474 DD 475
DD
Sbjct: 527 DD 528
>gi|169619627|ref|XP_001803226.1| hypothetical protein SNOG_13012 [Phaeosphaeria nodorum SN15]
gi|160703865|gb|EAT79812.2| hypothetical protein SNOG_13012 [Phaeosphaeria nodorum SN15]
Length = 661
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 112/559 (20%), Positives = 214/559 (38%), Gaps = 103/559 (18%)
Query: 5 REALLLLLDVSPSMHSVLPDVE--------------KLCSRLIQKKLIYGKNHEVGVILF 50
++A+L +DVSPSM P E K +L+Q+++I N +G++LF
Sbjct: 37 KDAVLFAIDVSPSMLERPPKTEDKKADRDSPTSAALKCAYQLMQQRIISNPNDMMGILLF 96
Query: 51 GTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ--------------GTCAG 96
GTE+T+ L ++H +L D+ V V+ L+ L + G
Sbjct: 97 GTEKTD--LKDGDSTFQHCYLLADLDVPSAQDVKRLRDLVEDEEEAEQILKPAKDGASIA 154
Query: 97 DYMLIKKYGETYKG----KKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGL---- 148
+ T K + L L+TD P+ +V +D T AR + G
Sbjct: 155 TVLFCANQIFTTKAPNFSSRRLFLVTDNDYPV---NVKADKDTAVTRARDLYDLGCTIDL 211
Query: 149 -------------RMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSL 195
R + +V + +P + + + +K TL +S+
Sbjct: 212 FPISQPDQTFDRSRFYDDLVYPTSPSDPDAPIAVATTTKV---AKSGEGITLLKQLISSI 268
Query: 196 RGARKTRDISPVTIFRGDLELSEKMKIKVWVY---KKTGEEKFPTLKKYSDKAPSTDKFA 252
R +F LEL ++I V Y K+ K + DK
Sbjct: 269 NSKATPRR----ALFSLPLELGPDLRIGVKGYILIKRQEHAKSCYVWVGGDKPQIVSSST 324
Query: 253 THEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFK-PEKSVKLLGF 311
+H +D ++VV + K Y++G + + E ++ + ++++GF
Sbjct: 325 SH---------MADDTARVVEKTELRKAYKFGGDAITFTPDEIIKIRQAFGDPIIRIIGF 375
Query: 312 TDASNI-LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVV 370
S + + K ++ +E +T SAL + + + K+ +V + R+ ++
Sbjct: 376 KPISCLPIWTNTNKATFIYPSEADFIGSTRVFSALQQKLLKSKKMGLVWFIARRNAAPIL 435
Query: 371 VGVLTPNVSEKIN------IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAA 424
++ E+ N +P + LP+A+D+R+F P+ + + +
Sbjct: 436 SALIP--AEEQTNEDGEQAMPPGLWLVPLPWADDIRQFPSPAADVLKTT----DALTDKM 489
Query: 425 DNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPD 484
+++ L L P G + P PNP L+ FY L+ + ++ P D ++ K +
Sbjct: 490 RIIIEQLQL-PKG---VYDPAKYPNPDLQWFYRILQAMALEEELPEKPDDKTMPKFRQ-- 543
Query: 485 PTLLAESQSAIDAFCGQFV 503
ID CG+++
Sbjct: 544 ----------IDKRCGEYI 552
>gi|121929599|sp|Q0U5F2.1|KU70_PHANO RecName: Full=ATP-dependent DNA helicase II subunit 1; AltName:
Full=ATP-dependent DNA helicase II subunit Ku70
Length = 652
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 112/559 (20%), Positives = 214/559 (38%), Gaps = 103/559 (18%)
Query: 5 REALLLLLDVSPSMHSVLPDVE--------------KLCSRLIQKKLIYGKNHEVGVILF 50
++A+L +DVSPSM P E K +L+Q+++I N +G++LF
Sbjct: 28 KDAVLFAIDVSPSMLERPPKTEDKKADRDSPTSAALKCAYQLMQQRIISNPNDMMGILLF 87
Query: 51 GTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ--------------GTCAG 96
GTE+T+ L ++H +L D+ V V+ L+ L + G
Sbjct: 88 GTEKTD--LKDGDSTFQHCYLLADLDVPSAQDVKRLRDLVEDEEEAEQILKPAKDGASIA 145
Query: 97 DYMLIKKYGETYKG----KKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGL---- 148
+ T K + L L+TD P+ +V +D T AR + G
Sbjct: 146 TVLFCANQIFTTKAPNFSSRRLFLVTDNDYPV---NVKADKDTAVTRARDLYDLGCTIDL 202
Query: 149 -------------RMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSL 195
R + +V + +P + + + +K TL +S+
Sbjct: 203 FPISQPDQTFDRSRFYDDLVYPTSPSDPDAPIAVATTTKV---AKSGEGITLLKQLISSI 259
Query: 196 RGARKTRDISPVTIFRGDLELSEKMKIKVWVY---KKTGEEKFPTLKKYSDKAPSTDKFA 252
R +F LEL ++I V Y K+ K + DK
Sbjct: 260 NSKATPRR----ALFSLPLELGPDLRIGVKGYILIKRQEHAKSCYVWVGGDKPQIVSSST 315
Query: 253 THEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFK-PEKSVKLLGF 311
+H +D ++VV + K Y++G + + E ++ + ++++GF
Sbjct: 316 SH---------MADDTARVVEKTELRKAYKFGGDAITFTPDEIIKIRQAFGDPIIRIIGF 366
Query: 312 TDASNI-LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVV 370
S + + K ++ +E +T SAL + + + K+ +V + R+ ++
Sbjct: 367 KPISCLPIWTNTNKATFIYPSEADFIGSTRVFSALQQKLLKSKKMGLVWFIARRNAAPIL 426
Query: 371 VGVLTPNVSEKIN------IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAA 424
++ E+ N +P + LP+A+D+R+F P+ + + +
Sbjct: 427 SALIP--AEEQTNEDGEQAMPPGLWLVPLPWADDIRQFPSPAADVLKTT----DALTDKM 480
Query: 425 DNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPD 484
+++ L L P G + P PNP L+ FY L+ + ++ P D ++ K +
Sbjct: 481 RIIIEQLQL-PKG---VYDPAKYPNPDLQWFYRILQAMALEEELPEKPDDKTMPKFRQ-- 534
Query: 485 PTLLAESQSAIDAFCGQFV 503
ID CG+++
Sbjct: 535 ----------IDKRCGEYI 543
>gi|308807210|ref|XP_003080916.1| putative ATP-dependent DNA helicase II (ISS) [Ostreococcus tauri]
gi|116059377|emb|CAL55084.1| putative ATP-dependent DNA helicase II (ISS) [Ostreococcus tauri]
Length = 540
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 97/202 (48%), Gaps = 30/202 (14%)
Query: 308 LLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQ 367
L+GF DA I R +K + FIA G + AV+AL RA NKVAI C + + +
Sbjct: 241 LVGFIDAKRITRDLCLKKSH-FIA--GEEKGCAAVNALIRACDVENKVAI--CAYVRAKS 295
Query: 368 S-----VVVGVLTPNVS----------EKINIPDSFYFNVLPFAEDVREFQFPSFSKFPV 412
+ ++ L P+V +++ P+ F+ LPF +D+R + + S
Sbjct: 296 AGFRYVALLPQLAPHVEPGLGDADDAIARLDPPEGFHVFYLPFRDDLRHPESVAGSVKKP 355
Query: 413 SWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPP 472
+ + ++Q +AA N+V+ + L P+ TPNPAL+ Y LE+ + ++ P
Sbjct: 356 APRATKEQIDAARNVVEAIRLTG------WHPKQTPNPALQTHYRVLEMCALERNVMEPV 409
Query: 473 LDDSLKKITEPD----PTLLAE 490
DD+ + E P LLA+
Sbjct: 410 HDDTEPALDEWARVGVPALLAD 431
>gi|336470968|gb|EGO59129.1| protein Ku70 [Neurospora tetrasperma FGSC 2508]
gi|350292044|gb|EGZ73239.1| protein Ku70 [Neurospora tetrasperma FGSC 2509]
Length = 645
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 117/542 (21%), Positives = 217/542 (40%), Gaps = 115/542 (21%)
Query: 5 REALLLLLDVSPSM--------------HSVLPDVEKLCSRLIQKKLIYGKNHEVGVILF 50
++A+L +DVS SM S L +++Q+++I +GV+LF
Sbjct: 29 KDAVLFAIDVSKSMLKPPQTTGDKKADKDSALTAALTCAYQIMQQRIISQPRDMMGVLLF 88
Query: 51 GTEETENELTKEVG-GYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDYMLIKK------ 103
GTE+++ G GY H +L D+ + V+ LK L + D +++
Sbjct: 89 GTEKSKFRDDSGSGTGYPHCYLLSDLDIPGAEDVKKLKALVEDGEDEDEIMVPSKEPVIM 148
Query: 104 ------------YGETYKGKKHLCLITDALCPLKDPDVGTKEDQVST------------- 138
G + L ++TD DP G K+ + S
Sbjct: 149 SNMLFCANQVFTTNAANFGSRRLFIVTDN----DDPHAGDKQAKSSAAVRAKDLYDLGVV 204
Query: 139 -----IARQMVAFGLR--MKNIVVR-----ASLSGEPHMR-----VIIENDNLLNIFSKK 181
I+R+ F L +I+ R A S P + + N + NI SK+
Sbjct: 205 IELFPISREDKKFDLSKFYDDIIYRDPAAEAGQSEGPKTSKSGDGLTLLNSLISNINSKQ 264
Query: 182 SSAKTLFVDSTTSLRGARKTRDISPVTI-FRGDLELSEKMKIK-VWVYKKTGEEKFPTLK 239
+ ++ F + L +TI +G + L+ + + +VY+ GEE+ ++
Sbjct: 265 TPKRSYFSNLPFELAPG--------LTISIKGYMPLTRQTPTRSCYVYE--GEEQAQVVQ 314
Query: 240 KYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVK 299
+ +VD+ ++VE + KGY++G + + E +K
Sbjct: 315 -------------SETAQVDFAARTVEK-------SELRKGYKFGGEHICFKPEELAELK 354
Query: 300 FKPEKSVKLLGFTDASNILRHYYM-KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIV 358
+K+++++GF S I + K + +F +E +T SAL + + + +KV I
Sbjct: 355 QMGKKTLRIIGFKKRSKIPSWASVKKSIFIFPSEEQYVGSTRVFSALWQKLLKDDKVGIA 414
Query: 359 RCVWRQGQQSVVVGVL---TPNVSEKIN--IPDSFYFNVLPFAEDVREFQFPSFSKFPVS 413
V R+ V+V + P+ E +P + LPFA+DVR S
Sbjct: 415 WFVARENAHPVMVAIFPSGNPDDEEANTPYLPAGLWLYPLPFADDVR-----SVDHVTAP 469
Query: 414 WQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPL 473
+P ++ + +++ L L + + P PNP+L+ Y L+ K+ ++ P +
Sbjct: 470 PRPADELTDQMRQVIQNLQLPKA----MYDPRRYPNPSLQWHYKILQAKALDEE-TPDAI 524
Query: 474 DD 475
DD
Sbjct: 525 DD 526
>gi|340380522|ref|XP_003388771.1| PREDICTED: x-ray repair cross-complementing protein 5-like
[Amphimedon queenslandica]
Length = 579
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 116/494 (23%), Positives = 200/494 (40%), Gaps = 81/494 (16%)
Query: 4 TREALLLLLDVSPSMHSVLPDVEKL-------CSR-LIQKKLIYGKNHEVGVILFGTEET 55
T++ L+LL+DVS M + + + C+R ++ K+I + VGV+ FGT +
Sbjct: 32 TKDCLILLIDVSLGMFVKDEETKGIPFELCIKCARSVLLNKVISSEKDLVGVVFFGTNKE 91
Query: 56 ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDYMLIKKYGETY------- 108
N ++HV +LQD+ + D ++ L+ + + G K YG +
Sbjct: 92 NNP-----SDFKHVYILQDLDMPDAPRIKELETMLED--EGFQTFEKDYGHSNDFSLSDV 144
Query: 109 --------------KGKKHLCLITDALCPLK-DPDVGTKEDQVSTIARQMVAFGLRMKNI 153
+ + L T+ P + +P + + Q T A+ + G+ ++ +
Sbjct: 145 FWTCSTMLSTSGAKSSHRRILLFTNNDHPHQSNPAL---QRQAKTKAKDLAENGIEVELM 201
Query: 154 VVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGAR-KTRDISPVTIFRG 212
+ + + + I+ +D+ S K F + T +R K R + +T G
Sbjct: 202 HIGSGFNVTSFYQEIVFSDDGDGTSFPDPSEK--FEELLTRVRSKELKKRALQRITFSLG 259
Query: 213 -DLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKV 271
DLEL V VY E K P+ + DK E+K + K ED +
Sbjct: 260 PDLELG------VGVYCMVRETKKPSFIRL-------DKRTNEELKTQTK-KLCEDTGSI 305
Query: 272 VPPEQRIKGYRY---GPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN- 327
+ P IK Y+ G + V E + +K + L+GF S + H+Y+K N
Sbjct: 306 LLPTD-IKYYQVLGAGGEKVIFEEEEIKELKNFGKPGFTLMGFRPKSKMKMHHYIKPANF 364
Query: 328 LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSE----KIN 383
++ E S +T S L R VA+ + + R + V L P E I
Sbjct: 365 IYPDETTVSGSTKLFSVLLRRCISREVVAVCKYIPRNNSPPIFVA-LVPQEEELDDSNIQ 423
Query: 384 I-PDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEIL 442
I P F+ LPF+ED+R P + P + + +Q + A ++K L
Sbjct: 424 ISPPGFHVIFLPFSEDIRSLDLP--DEMP---KASHEQIDKAKEIIKKLSFN-------F 471
Query: 443 QPELTPNPALERFY 456
Q E NP +++ Y
Sbjct: 472 QSESFENPVIQKHY 485
>gi|398404460|ref|XP_003853696.1| hypothetical protein MYCGRDRAFT_85040 [Zymoseptoria tritici IPO323]
gi|339473579|gb|EGP88672.1| hypothetical protein MYCGRDRAFT_85040 [Zymoseptoria tritici IPO323]
Length = 644
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 112/542 (20%), Positives = 218/542 (40%), Gaps = 90/542 (16%)
Query: 4 TREALLLLLDVSPSMHS-------------VLPDVEKL-CS-RLIQKKLIYGKNHEVGVI 48
T++A+L +DVS SM + + P V L C+ L+Q+++I + +G++
Sbjct: 23 TKDAVLFAIDVSESMLAKPSEADPKKPDTGLSPTVAALKCAYSLMQQRIISNPSDMMGIL 82
Query: 49 LFGTEETENELTKEVGG-----YEHVKVLQDIKVVDGHLVQSLKHL-------------- 89
LFGTE+++ + E G Y H +L D+ V V+ L+ L
Sbjct: 83 LFGTEKSKFQEGDEKTGSGALQYPHCYLLTDLDVPAAADVKLLRDLVDDEEESAAILQAS 142
Query: 90 PQGTCAGDYMLIKKYGETYKG----KKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVA 145
P+ + + T K + L ++TD P P+ + + A+ +
Sbjct: 143 PEEVSMANVLFCANQVFTTKAPNFNSRRLFIVTDNDYP--HPNSRDSRNSAAVRAKDLYD 200
Query: 146 FGLRMK-------------------NIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKT 186
G+ ++ N +V +S +P + D I + S+AK
Sbjct: 201 LGVTIELFPISHPDRDYTFDRSKFYNDIVYSSTPADPDAPAPLTAD----IKAASSTAKD 256
Query: 187 LFVDSTTSLRGARKTRDISPVTIFRG-DLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKA 245
+ SL + +R +F LE+ +I + + + + P Y
Sbjct: 257 -GISLLQSLISSVNSRSAPRRALFSSVPLEIGPGFRIGIKGFLIL-KRQVPKRSTYVYVP 314
Query: 246 PSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKS 305
P ++K ++ V ED ++ V + + +++G + V + E A++ +
Sbjct: 315 PDSEK---AQLAVGSSTLVAEDTARTVEKIEIRRAFKFGGETVSFTDEELAAIQNYGDPI 371
Query: 306 VKLLGFTDASNILRHYYMKDVN-LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQ 364
++++GF D + +K+ L+ +E +T SAL + + A+ + R+
Sbjct: 372 IRIIGFKDLELLPAWAAIKESTFLYPSEDSFIGSTRVFSALHQTLLRKRYFALAWYIPRR 431
Query: 365 GQQSVVVGVLTP----NVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQ 420
+ +VG+L N S ++P + LPFA+D+R P
Sbjct: 432 NAKPRLVGLLPGAEERNASGDQDMPPGLWVRPLPFADDIRS-------------APETSL 478
Query: 421 QEAADNLV-KMLDLAPSGK--GEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSL 477
A DN+V KM + + + G + P+ PNP+L+ F+ L+ + +D P D +L
Sbjct: 479 VRAPDNVVDKMRTVLQNLQLPGAVYDPKKYPNPSLQWFFRILQALALEEDLPELPEDKTL 538
Query: 478 KK 479
+
Sbjct: 539 PR 540
>gi|452984054|gb|EME83811.1| hypothetical protein MYCFIDRAFT_65414 [Pseudocercospora fijiensis
CIRAD86]
Length = 665
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 122/549 (22%), Positives = 216/549 (39%), Gaps = 109/549 (19%)
Query: 5 REALLLLLDVSPSM-------HSVLPDVE--------KLCSRLIQKKLIYGKNHEVGVIL 49
++A+L +D S SM + PD K L+Q+++I N +G++L
Sbjct: 29 KDAVLFAIDASASMLRKPSEIDAKKPDTALSSTAAALKCAYALMQQRIISNPNDMMGILL 88
Query: 50 FGTEET---ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTC-AGDYMLIKK-- 103
F TE++ E + Y H +L D+ V V+ L+ L + A D + K
Sbjct: 89 FNTEKSKFQEQDGESRNWQYPHCYLLMDLDVPAAADVKQLRTLVEDEEEAADILQASKDE 148
Query: 104 ---------YGETYKGK------KHLCLITD----------------------------- 119
+ + K + L L+TD
Sbjct: 149 VSMANVLFCANQVFTTKAPNFSSRRLFLVTDNDYPHASDRDARNSAAVRAKDLYDLGVTI 208
Query: 120 ALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFS 179
L P+ PD G D+ R N ++ +S +P + + +D I +
Sbjct: 209 ELFPISHPDRGYTFDRT------------RFYNDIIYSSTPSDPDAPMPLTSD----IKA 252
Query: 180 KKSSAKTLFVDSTT---SLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFP 236
SSAK D T SL + +R+ T F E+ +KI V Y +++ P
Sbjct: 253 ASSSAK----DGITLLQSLINSVASRNAPRRTFFNVPFEIGPGLKIGVKGYIIFKKQE-P 307
Query: 237 TLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWE 296
Y P ++K ++ V E+ ++ V + K +++G + V S E
Sbjct: 308 KRTSYVYLPPDSEK---AQIAVGSSTMVEEETARTVEKTEIRKAFKFGGETVTFSLEEEA 364
Query: 297 AVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFI--AEPGNSRATVAVSALARAMKEMNK 354
+K + ++++LGF S +L + D ++FI +E +T SAL + + + K
Sbjct: 365 KIKDFGDPTIRILGFKPMS-MLPMWATLDKSVFIYPSEETWVGSTRVFSALHQKLLKDQK 423
Query: 355 VAIVRCVWRQGQQ----SVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKF 410
+ + R+ +V+ G N ++P + VLPFA+D+RE + +
Sbjct: 424 FGLAWYIARRNATPKLAAVIPGAEERNEGGDQHMPPGMWVKVLPFADDIREPPETNVVRA 483
Query: 411 PVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAP 470
P + +A +V+ L L P G + P PNPAL+ F+ L+ + +D
Sbjct: 484 P------DDVVDAMRKVVQQLQL-PKG---VYDPTKYPNPALQWFFKILQALALEEDLPE 533
Query: 471 PPLDDSLKK 479
P D +L +
Sbjct: 534 QPEDKTLPR 542
>gi|46401618|dbj|BAD16622.1| MUS51 [Neurospora crassa]
Length = 645
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 115/539 (21%), Positives = 212/539 (39%), Gaps = 115/539 (21%)
Query: 8 LLLLLDVSPSM--------------HSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTE 53
+L +DVS SM S L +++Q+++I +GV+LFGTE
Sbjct: 32 VLFAIDVSKSMLKPPQNTGDKKADKDSALTAALTCAYQIMQQRIISQPKDMMGVLLFGTE 91
Query: 54 ETENELTKEVG-GYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDYMLIKK--------- 103
+++ G GY H +L D+ + V+ LK L + D +++
Sbjct: 92 KSKFRDDSGNGTGYPHCYLLSDLDIPGAEDVKKLKALIEDGDDEDEIMVPSKEPVIMSNM 151
Query: 104 ---------YGETYKGKKHLCLITDALCPLKDPDVGTKEDQVST---------------- 138
G + L ++TD DP G K+ + S
Sbjct: 152 LFCANQVFTTNAANFGSRRLFIVTDN----DDPHAGDKQAKSSAAVRAKDLYDLGVVIEL 207
Query: 139 --IARQMVAFGLR-------MKNIVVRASLSGEPHMR-----VIIENDNLLNIFSKKSSA 184
I+R+ F L +N A S P + + N + NI SK++
Sbjct: 208 FPISREDKKFDLSKFYDDIIYRNPAAEAGQSESPKTSKSGDGLTLLNSLISNINSKQTPK 267
Query: 185 KTLFVDSTTSLRGARKTRDISPVTI-FRGDLELSEKMKIK-VWVYKKTGEEKFPTLKKYS 242
++ F + L +TI +G + L+ + + +VY+ GEE+ ++
Sbjct: 268 RSYFSNLPFELAPG--------LTISIKGYMPLNRQTPTRSCYVYE--GEEQAQVVQ--- 314
Query: 243 DKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKP 302
+ +VD+ ++VE + KGY++G + + E +K
Sbjct: 315 ----------SETAQVDFAARTVEK-------SELRKGYKFGGEHICFKPEELAELKQMG 357
Query: 303 EKSVKLLGFTDASNILRHYYM-KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCV 361
+K+++++GF S I + K + +F +E +T SAL + + + +KV I V
Sbjct: 358 KKTLRIIGFKKRSKIPSWASVKKSIFIFPSEEQYVGSTRVFSALWQKLLKDDKVGIAWFV 417
Query: 362 WRQGQQSVVVGVL---TPNVSEKIN--IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQP 416
R+ V+V + P+ E +P + LPFA+DVR S +P
Sbjct: 418 ARENAHPVMVAIFPSGNPDDEEANTPYLPAGLWLYPLPFADDVR-----SVDHVTAPPRP 472
Query: 417 NEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDD 475
++ + +++ L L + + P PNP+L+ Y L+ K+ ++ P +DD
Sbjct: 473 ADELTDQMRQVIQNLQLPKA----MYDPRKYPNPSLQWHYKILQAKALDEE-TPDAMDD 526
>gi|443899962|dbj|GAC77290.1| DNA-binding subunit of a DNA-dependent protein kinase [Pseudozyma
antarctica T-34]
Length = 837
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 98/211 (46%), Gaps = 22/211 (10%)
Query: 270 KVVPPEQR---IKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDV 326
+ +PP+ + ++ G ++P+ + ++ + K ++++ F AS R Y + +
Sbjct: 400 EALPPDSEANFTRAWKLGASLIPVPDEAFGSMDTR--KGMEVVHFFSASAYRREYNVDQI 457
Query: 327 NLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD 386
A+ +A + +S L RAM E++ +A+VR V + G + +G+L P V E
Sbjct: 458 WYVFADHAQLKAQLQLSTLVRAMVELDVLAVVRLVRKDGAEP-ELGILKPRVEEHNEF-- 514
Query: 387 SFYFNVLPFAEDVREFQFPSFSKFPVS---------WQPNEQQQEAADNLVKMLDLAPSG 437
+++ PF ED+R F FP + + P++Q Q+ D V ++L P
Sbjct: 515 -LFYSRAPFREDLRRFPFPPLDRIVTTDGTEVRQAPTIPDDQDQKCMDAFVDSMEL-PDE 572
Query: 438 KGEILQPELTPNPALERFYHHLELKSEHQDA 468
++L + NPA+ + + H DA
Sbjct: 573 WFDVLD---SYNPAIHGLKTAVRHRFVHPDA 600
>gi|302497513|ref|XP_003010757.1| hypothetical protein ARB_03459 [Arthroderma benhamiae CBS 112371]
gi|291174300|gb|EFE30117.1| hypothetical protein ARB_03459 [Arthroderma benhamiae CBS 112371]
Length = 376
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 87/394 (22%), Positives = 157/394 (39%), Gaps = 64/394 (16%)
Query: 323 MKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKI 382
M + N+ IA+ N++A +A+S++ A+ E+ A+ R V + G+ +V +L P++
Sbjct: 1 MSNSNVIIAQRTNNKAIIALSSIIHALHEVESYAVGRLVTKDGKSPTLV-LLAPSID--- 56
Query: 383 NIPD--SFYFNVLPFAEDVREFQFPSFSKFPVSWQ---------PNEQQQEAADNLVKML 431
PD LPFAEDVR ++FP + PNE A + V+ +
Sbjct: 57 --PDYECLLEVQLPFAEDVRCYRFPPLDRVTTMSGKVVKEHRNLPNENLLSAMEKYVENM 114
Query: 432 DLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAES 491
+L P E + ++ H PP+ L+K + L+ S
Sbjct: 115 ELV--------------QPGEEGVDQAIRWRAIHPTKPLPPIPKVLQKQSRQPDELMEHS 160
Query: 492 QSAIDAFCGQFVIKENPKLKKSTRRFLR----EKPSGSD--------EPNGDGSVSDAQA 539
+SA++ +K+ KLK S R R PS P G +
Sbjct: 161 KSALEQLIKTSDVKKG-KLKPSIPRVGRGDLISPPSHHIFLLTAIIVPPKVKG-----RK 214
Query: 540 VNSMESKPVVTVD-----------KIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIF 588
N + KP+ +D +I I +F+ ++ D + V ++++ M I
Sbjct: 215 RNRITDKPLSGLDVDALLQGEKRQRISPENAIPEFKQALANTDDINTVKESVKQMCAIIE 274
Query: 589 GLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFS----TFFD 644
+++S NY + VE + +R I +EP +ND + ++ + +
Sbjct: 275 NQIKHSLGDANYDRVVEYIGTMRDELISFEEPDLYNDFIRELKRKLLDDKLGEDRRELWW 334
Query: 645 FLMSKKLSLISKSEAVDSDITDDEAGSFIVKSQP 678
+ K++ LI S +T+ EA + P
Sbjct: 335 LIRKKRIGLIDDKLVEISKVTEQEAKEVCIYPIP 368
>gi|156371372|ref|XP_001628738.1| predicted protein [Nematostella vectensis]
gi|156215722|gb|EDO36675.1| predicted protein [Nematostella vectensis]
Length = 230
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 56/99 (56%), Gaps = 10/99 (10%)
Query: 5 REALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETEN 57
++A+ ++LD+ PSM S P E K + +IQ+K+ E +ILFGTEET N
Sbjct: 4 KDAVAIILDIGPSMSSAPPGHETSLELSIKAINMIIQRKMFANAKDEFSLILFGTEETSN 63
Query: 58 ELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAG 96
L +E GGYE++ V++D+ D ++ L+ + G G
Sbjct: 64 RLNEECGGYENISVVKDLAPPD---LEMLRFIHDGITPG 99
>gi|367003563|ref|XP_003686515.1| hypothetical protein TPHA_0G02460 [Tetrapisispora phaffii CBS 4417]
gi|357524816|emb|CCE64081.1| hypothetical protein TPHA_0G02460 [Tetrapisispora phaffii CBS 4417]
Length = 626
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 118/256 (46%), Gaps = 24/256 (9%)
Query: 272 VPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFI- 330
V P K +RYG V + + + + ++ + GF + +++ R Y++ + FI
Sbjct: 317 VSPNSVSKAFRYGSDYVILPAVINDQRTMNNKANIDIRGFMNETSLPR-YFLNSESKFIF 375
Query: 331 --AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKI---NIP 385
+ G+ ++ AL + E K+AIVR V + + V + L P VS KI NI
Sbjct: 376 FDSRNGSKSDVYSMYALVDVLMENKKIAIVRYVQKHNGE-VEMCALYPMVS-KISDRNIV 433
Query: 386 DSFYFNVLPFAEDVREFQFPSF-SKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQP 444
F N LPFAED R FP ++ S + E+ +E D + K++ S +++
Sbjct: 434 RYFVLNRLPFAEDERVSDFPKLVNRLSTSGKLIEENKEEEDKIDKLM----SDFVDLMDT 489
Query: 445 ELTPNPALERFYHHLELKSEHQDAAPPPLDDS-LKKITEPDPTL-----LAESQSAIDAF 498
+ + E +Y ++ S+ P P ++ ++K E DPTL L +S I+A+
Sbjct: 490 DDMKSIPNELYYRPIDGLSDKTSVLPLPNENKVIEKAIENDPTLSYAISLYLQKSNINAY 549
Query: 499 CGQFVI----KENPKL 510
I K+ PK+
Sbjct: 550 IHNHYIVKGDKQQPKV 565
>gi|390597184|gb|EIN06584.1| Ku DNA-binding complex Ku70 subunit [Punctularia strigosozonata
HHB-11173 SS5]
Length = 663
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 142/645 (22%), Positives = 244/645 (37%), Gaps = 128/645 (19%)
Query: 5 REALLLLLDVSPSMHSVLPDVE------KLCSRLI---------QKKLIYGKNHEVGVIL 49
R+ +L +D S SM + D K C L+ +KK++ G N +G++
Sbjct: 28 RDVILFAIDCSSSMLELRDDPTYEEGEVKTCHLLVALQSAMEISKKKVLVGPNDSIGILF 87
Query: 50 FGTEETENELTKEVGGYEHVK----VLQDIKVVDGHLVQSLKHL---------------- 89
F T N+ +G +K V Q I V+ +Q L L
Sbjct: 88 FNTTR-RNQKGDNMGQSSEIKPGAYVYQPISTVNASSIQELIRLLNEARENPSYLSETFP 146
Query: 90 --PQG--TCAGDYM----LIKKYGETYKGKKHLCLITDALCPLKDP-DVGTKEDQVSTIA 140
P G GD + + G K + LITD P D ++++ T A
Sbjct: 147 PLPDGEKMAMGDVFTSCNWVIRDGAPKTATKRIFLITDEDDPTPSGYDTSAAKEKLITSA 206
Query: 141 RQMVAFGLRMKNIVV---------RASLSGEPHMRVIIENDNLLNIFSKKSSA--KTLFV 189
Q L I+V R+ G+ + V+ N ++L + A + + +
Sbjct: 207 -QTTLTDLTQAGIMVEPFFISTEERSFDIGKFYTSVL--NSHMLPTEEEDGGALPEQISI 263
Query: 190 DSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTD 249
L G + ++ ++F LEL+ +I V Y E+K + D +
Sbjct: 264 TRIDDLLGQMRFHEVPKRSLFSIGLELAPGFRISVKGYGLVTEQKKGKSMYFVDMGDRME 323
Query: 250 KFATHEVKVDYEYKSVEDPSKVV----------PPEQRIKGYRYGPQVVPISSAEW---- 295
+ VD +Y+ D S+++ Q +G G + P+ +
Sbjct: 324 VAESRAAYVDEDYQEERDKSEILFGMELGSAAASAGQEDQGASGGGVIRPVERGKRVFYT 383
Query: 296 --EAVKFKP---EKSVKLLGFTDASNILRHYYMK-DVNLFIAEPGNSRATVAVSALARAM 349
E F+ E +KLLGF D S + +K V ++ E S + S+L ++M
Sbjct: 384 ADEVRGFRTMGLEPGLKLLGFKDRSELAFEDNVKHSVFIYPDEMTYSGSKRTFSSLLKSM 443
Query: 350 KEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEK----INIPDSFYFNVLPFAEDVREFQFP 405
+ +K+AIV + R+ +L P ++ N P F+ LPFA+D+R
Sbjct: 444 LKKDKIAIVLALLRRNASPTFCAML-PQAEKQDEAGWNDPAGFHLIPLPFADDIRA---- 498
Query: 406 SFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEH 465
+ ++ +E ++AA + V+ L L K +P+ PNP+L L+ +
Sbjct: 499 --AALEEGFRASEDVKKAAQSWVEKLCL----KNGTYEPDSYPNPSLAFHNAQLQASAFR 552
Query: 466 QDAAPPPLDD-SLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPS- 523
++ P +D +L KI + K KL + + L E PS
Sbjct: 553 EEYDPTTFEDLTLPKI--------------------DMIHKRAGKLIQMWKEALAEDPSS 592
Query: 524 --------GSDEPNGDGSVSDAQAVNSMESKPVVT---VDKIGDL 557
G+ + D V+DA+ V SM +T VD++ D
Sbjct: 593 GAVIATATGATKRKADAGVNDAE-VRSMYENGWLTKLRVDQLKDF 636
>gi|388581870|gb|EIM22177.1| SPOC domain-like protein [Wallemia sebi CBS 633.66]
Length = 605
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 119/501 (23%), Positives = 203/501 (40%), Gaps = 84/501 (16%)
Query: 214 LELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVP 273
+S+++ IKV K G+ LK S +A + K +T +V + K V
Sbjct: 146 FNISDEISIKVKYQKAVGKATKLPLK--SLRADNNSKVSTSQVHRLGDSK--------VD 195
Query: 274 PEQRIKGYRYGPQVVPI-SSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAE 332
I+ Y YG +VP +E V+F E + L AS R + + + A+
Sbjct: 196 SHNLIRAYHYGSILVPRPDESEGGFVEFTSEAGIDFLSTFPASTFKRDMVIGEPSFIYAD 255
Query: 333 PGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNV 392
+ + +A+S+ A+ + +A+VR R + +G+ P ++ + + +
Sbjct: 256 QSDGSSGLALSSFINALDKNGLIALVRYA-RTKDEKPYLGLCLPIINGQT---EYLQYLR 311
Query: 393 LPFAEDVREFQFPSFSKF------PVS---WQPNEQQQEAADNLVKMLDLAPS-GKGEIL 442
+PFA+ +R + FPS + P+ + P ++ A DN V +DL + K
Sbjct: 312 IPFADQMRNYSFPSLERVVTKSGEPLQNHKYLPTDKMCLAMDNFVNSMDLHDTDDKRTWF 371
Query: 443 QPELTPNPALERFYHHL--------ELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSA 494
+ PA R Y + +K E QDA P LKK EP S A
Sbjct: 372 DINTSYTPAHHRIYQAVIHGASTGSIIKDELQDAHP-----ELKKYLEPPSFAQKRSIDA 426
Query: 495 IDAFCGQF-VIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNS---MESKPVVT 550
++ +F + K PK K RR +E V +AQ +N + KP +
Sbjct: 427 LENCKNEFNLTKPTPKAKYH-RRHSKE------------DVREAQEINIDDLLGGKPTTS 473
Query: 551 ---VDKI----------GDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEG 597
VDK G TP Q ++ ++ D P+ V E M I L
Sbjct: 474 PRPVDKTIEGDAKKGTDGAFTPDQVWQT-LNNLDDPEEV---YEIMSASIRETLGKHTTD 529
Query: 598 INYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLM---SKKLSLI 654
++P V L LR + +N+++ +V + + F+ FL +KLSLI
Sbjct: 530 NHHPLKVG-LQHLRDFATKNNIAEDYNELIREV------KEDTQFWSFLRENEGEKLSLI 582
Query: 655 S--KSEAVDSDITDDEAGSFI 673
+ + E S++T ++ +F+
Sbjct: 583 TSGEDEHGTSEVTSSQSRNFM 603
>gi|358057495|dbj|GAA96493.1| hypothetical protein E5Q_03161 [Mixia osmundae IAM 14324]
Length = 889
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 109/491 (22%), Positives = 194/491 (39%), Gaps = 98/491 (19%)
Query: 272 VPPEQRIKGYRYGPQVVPISSAEWEAVK----FKPEKSVKLLGFTDASNILRHYYMKDVN 327
V PE +K Y+YG +VP+ A+++ +K F+P ++++ FT AS I + DV
Sbjct: 407 VRPEDLVKAYKYGATLVPL--ADFDEIKTDLNFQP--GLQVISFTKAS-IALETLLGDVY 461
Query: 328 LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQS----VVVGVLTPNVSEKIN 383
A + + V SA AM E VA+ R V ++G +G L P + + N
Sbjct: 462 YVHAHQDSPPSQVMFSAFIHAMHERQAVALTRYVGKRGAAGKAPDAKLGYLIPRIGKHWN 521
Query: 384 IPDSFYFNV-LPFAEDVREFQFPSFSKF-----PVSWQ----PNEQQQEAADNLVKMLDL 433
+ V LPF+ED+R ++ S + ++ + P ++ E D V +D+
Sbjct: 522 EDYQYCIWVQLPFSEDIRMYEMDSIEYYHKKDGSINHEHRNLPGKELMENMDAWVDAMDM 581
Query: 434 ------APSGKGEILQPELTPNPALERFYHHLELKSEH-QDAAPPPLDDSLKKITEPDPT 486
A + NPA+ + + ++ + +D + P + + K +P
Sbjct: 582 STATVDADGNYAPWFDVHDSYNPAIHHLKNSIVYRANNPEDTSLPEIHPEISKYLQPTQF 641
Query: 487 LLAESQSAIDAFCGQFVIKE-NPKLKKSTR------------------RFLREKPSGSDE 527
L ++ + +A +K PK +K ++ + L + S S+
Sbjct: 642 LQDRAKPSAEAVKATAGVKRLPPKAQKGSKAARAKKQLAPQQEELQFDKILGKAQSQSET 701
Query: 528 PNGDGSVS--------------------------DAQAVNS-------MESKPVVTVDKI 554
P SVS +A+A N+ E +P +
Sbjct: 702 PANRPSVSSLLNDTSNGRKYDSDVLTTPSTYRPAEAKAPNADLDGDTEDEDEPAGSHQGT 761
Query: 555 GDLTP---IQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALR 611
L P I DF +++ D V +AIE M + +++ S G Y +A + + R
Sbjct: 762 PALRPATAIDDFNSLVKTND----VKEAIEGMFALVHTIVKASFGGNRYEQARKYITLAR 817
Query: 612 KGCILEQEPKQFNDVLEKVCKICRKRNFST--FFDFLMSKKLSLISKSEAVD------SD 663
E E +ND + + + F F+ + S KL LI+ E + SD
Sbjct: 818 VTASEEDEVSTYNDSIRDLKTRILTQGFGNQDFWQQIRSHKLGLITIEEDKNLLGGQPSD 877
Query: 664 -ITDDEAGSFI 673
++D EA F+
Sbjct: 878 GVSDSEAAEFL 888
>gi|221507343|gb|EEE32947.1| conserved hypothetical protein [Toxoplasma gondii VEG]
Length = 938
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 95/452 (21%), Positives = 169/452 (37%), Gaps = 114/452 (25%)
Query: 33 IQKKLIYGKNHEVGVILFGTEETENELTKEVG------------GYEHVKVLQDIKVVDG 80
+Q+ +VGV+ FG+ T+N L G GY+HV+V +
Sbjct: 101 VQRLAATSAKVDVGVVCFGSCRTDNPLAPVEGDIQPGDTGDAEEGYKHVEVSLRPESASW 160
Query: 81 HLVQSLKHLPQGTCAGDY---------MLIKKYGETYKGKKHLCLITDALCPLKDPDVGT 131
LVQ L+ + D M+ K YG + ++ + + C T
Sbjct: 161 KLVQELEKVKNSANRSDAIDGLVVAVDMVEKTYGPKLS-QNNVSFLVFSDC---QSSPAT 216
Query: 132 KEDQVSTIARQMVAFGLRMKNIVVRASLS--------GEPHMRVIIENDNLLNIFSKKSS 183
ED + + ++ G+R+ I+V S+ G+P R+ N + ++ +
Sbjct: 217 PED-IPAVRDRLEVLGIRVHFIIVDGSVPTHPGIWRPGDPSARL---NQHFVSPLRPALA 272
Query: 184 AKTLFVDSTTSLRGARKTRDISPV--------TIFRGDLELSEKMKIKVWVYKKTGEEKF 235
+ +L + LR + ++ T R +LE+S+ I V+V+ +T +E
Sbjct: 273 SLSLVASTLIPLRSFLASPFMTAFYPPPKRLSTKCRVNLEVSKAFLIPVYVFVRTRKEPV 332
Query: 236 PTL-------------KKYSDKAPS----TDKFAT--------------HEVKVDYEYKS 264
PTL ++ +D P D F ++KV+ Y
Sbjct: 333 PTLRKRVFVGVSRPATRRRTDSVPREDTPGDAFGAEKTRNDQGEHDEDWRDLKVERFYFR 392
Query: 265 VEDPS----KVVPPE---------------------------------QRIKGYRYGPQV 287
DP K+ P+ QR+ YRYG Q+
Sbjct: 393 ANDPERTPVKLGEPDTRQRDGTSIFGRPDGSSEDERAPGAGGDAGVHIQRLYAYRYGKQL 452
Query: 288 VPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALAR 347
V +S E +A K + + +LG T +I R + + N + VA+ +L
Sbjct: 453 VAVSGVEQQAFKQQTTAGLVVLGVTRRDSIQRWWNLGPPEYVTCALNNRPSLVALRSLVL 512
Query: 348 AMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVS 379
A++ ++ V + VWR G + +V +L P+V
Sbjct: 513 ALQRLDSVLLCSFVWRGGYPAKLVALL-PHVG 543
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 65/136 (47%), Gaps = 32/136 (23%)
Query: 554 IGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLL---------------------- 591
+ + P++DF+ ++ ++ D +KAI++M IF L
Sbjct: 756 VHSVNPVRDFQRLLEVKET-DLTEKAIQEMTEMIFKFLRAAGPPQGALERPTGAGRGGET 814
Query: 592 ---ENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKV-CKICRK-----RNFSTF 642
+N + KA+ + ALR+GC E E ++FN+ L +V + CR +F TF
Sbjct: 815 SGLQNFRRQQHLGKALVCVEALREGCRRELEGEKFNEFLAEVKAEQCRADAAADDSFRTF 874
Query: 643 FDFLMSKKLSLISKSE 658
++ L S+K+ LI+ +E
Sbjct: 875 WNLLKSRKIGLITHAE 890
>gi|353244109|emb|CCA75559.1| related to ATP-dependent DNA helicase II, 80 kDa subunit
[Piriformospora indica DSM 11827]
Length = 858
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 8/144 (5%)
Query: 267 DPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDV 326
+P V E Y+YG +P+ A++E ++ K + +LGF R + M +V
Sbjct: 360 EPVVTVNDENTQIAYKYGSTYIPVDKADFETLQTV--KGLDILGFIPQHKFRREWSMGEV 417
Query: 327 NLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD 386
+ + + +A S++ RAM + AI+R V + VG+ P + EK D
Sbjct: 418 YYIWGDDQSGKMQLAFSSIVRAMAQEELCAIIRMV-TLNNSAPKVGIAVPRILEKA---D 473
Query: 387 SFYFNVLPFAEDVREFQFPSFSKF 410
+ +PFAED R F F S ++
Sbjct: 474 CLLW--MPFAEDNRNFAFQSLTRL 495
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 58/110 (52%), Gaps = 7/110 (6%)
Query: 554 IGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGL-LENSNEGINYPKAVELLVALRK 612
IG + P++DF A ++ D D V +A+ + + I L +E + +E + ALR+
Sbjct: 724 IGTVHPLEDFRAALASDD--DVVSEAVSQLADVIKSLAVEGKFPNKRKNELLEAMAALRE 781
Query: 613 GCILEQEPKQFNDVLEKVCKIC--RKRNFSTFFDFLMSK--KLSLISKSE 658
C+ E E Q+N L+++ IC K F++ + SK ++LI KSE
Sbjct: 782 TCLKEDEFDQWNKFLQELKDICLSSKPGNKPFWELVRSKGQTMTLIGKSE 831
>gi|221487550|gb|EEE25782.1| conserved hypothetical protein [Toxoplasma gondii GT1]
Length = 938
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 95/452 (21%), Positives = 168/452 (37%), Gaps = 114/452 (25%)
Query: 33 IQKKLIYGKNHEVGVILFGTEETENELTKEVG------------GYEHVKVLQDIKVVDG 80
+Q+ +VGV+ FG+ T+N L G GY+HV+V +
Sbjct: 101 VQRLAATSAKVDVGVVCFGSCRTDNPLAPVEGDIQPGDTGDAEEGYKHVEVSLRPESASW 160
Query: 81 HLVQSLKHLPQGTCAGDY---------MLIKKYGETYKGKKHLCLITDALCPLKDPDVGT 131
LVQ L+ + D M+ K YG + ++ + + C T
Sbjct: 161 KLVQELEKVKNSANRSDAIDGLVVAVDMVEKTYGPKLS-QNNVSFLVFSDC---QSSPAT 216
Query: 132 KEDQVSTIARQMVAFGLRMKNIVVRASLS--------GEPHMRVIIENDNLLNIFSKKSS 183
ED + + ++ G+R+ I+V S+ G+P R+ N + ++
Sbjct: 217 PED-IPAVRDRLEMLGIRVHFIIVDGSVPTHPGIWRPGDPSARL---NQHFVSPLRPALP 272
Query: 184 AKTLFVDSTTSLRGARKTRDISPV--------TIFRGDLELSEKMKIKVWVYKKTGEEKF 235
+ +L + LR + ++ T R +LE+S+ I V+V+ +T +E
Sbjct: 273 SLSLVASTLIPLRSFLASPFMTAFYPPPKRLSTKCRVNLEVSKAFLIPVYVFVRTRKEPV 332
Query: 236 PTL-------------KKYSDKAPS----TDKFAT--------------HEVKVDYEYKS 264
PTL ++ +D P D F ++KV+ Y
Sbjct: 333 PTLRKRVFVGVSRPATRRRTDSVPREDTPGDAFGAEKTRNDQGEHDEDWRDLKVERFYYR 392
Query: 265 VEDPS----KVVPPE---------------------------------QRIKGYRYGPQV 287
DP K+ P+ QR+ YRYG Q+
Sbjct: 393 ANDPERTPVKLGEPDTRQRDGTSIFGRPDGSSEDERAPGAGGDAGVHIQRLYAYRYGKQL 452
Query: 288 VPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALAR 347
V +S E +A K + + +LG T +I R + + N + VA+ +L
Sbjct: 453 VAVSGVEQQAFKQQTTAGLVVLGVTRRDSIQRWWNLGPPEYVTCALNNRPSLVALRSLVL 512
Query: 348 AMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVS 379
A++ ++ V + VWR G + +V +L P+V
Sbjct: 513 ALQRLDSVLLCSFVWRGGYPAKLVALL-PHVG 543
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 65/136 (47%), Gaps = 32/136 (23%)
Query: 554 IGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLL---------------------- 591
+ + P++DF+ ++ ++ D +KAI++M IF L
Sbjct: 756 VHSVNPVRDFQRLLEVKET-DLTEKAIQEMTEMIFKFLRAAGPPQGALERPTGAGRGGER 814
Query: 592 ---ENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKV-CKICRK-----RNFSTF 642
+N + KA+ + ALR+GC E E ++FN+ L +V + CR +F TF
Sbjct: 815 SGLQNFRRQQHLGKALVCVEALREGCRRELEGEKFNEFLAEVKAEQCRADAAADDSFRTF 874
Query: 643 FDFLMSKKLSLISKSE 658
++ L S+K+ LI+ +E
Sbjct: 875 WNLLKSRKIGLITHAE 890
>gi|145349578|ref|XP_001419207.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579438|gb|ABO97500.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 341
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 89/206 (43%), Gaps = 25/206 (12%)
Query: 308 LLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQ 367
L+GF DA I R +K + F+A G + A L RA E NKVAI C + +
Sbjct: 35 LVGFVDAKTITRDLCLKKSH-FVA--GEEKGCAAFQGLLRACVEENKVAI--CALSRSTR 89
Query: 368 SVVVGV-LTPNVS-------------EKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVS 413
S + V L P ++ ++ P+ F+ LPF +D R + S+
Sbjct: 90 SALRYVALLPQLAPSADEIAAADDAVSRLEPPEGFHVFYLPFRDDTRHPERAVASEKAPL 149
Query: 414 WQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPL 473
+ NE Q AA +++ + L P+ TPNPAL+ Y LE+ + ++ P
Sbjct: 150 PRANEAQITAARSVIDAIRLTQ------WHPKQTPNPALQTHYRVLEMCALERNVMEPVH 203
Query: 474 DDSLKKITEPDPTLLAESQSAIDAFC 499
DD+ + E + + DA C
Sbjct: 204 DDTEPALDEWQRAGIPALLAGFDAEC 229
>gi|58262800|ref|XP_568810.1| damaged DNA binding protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|134108504|ref|XP_777203.1| hypothetical protein CNBB4330 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259888|gb|EAL22556.1| hypothetical protein CNBB4330 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223460|gb|AAW41503.1| damaged DNA binding protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 836
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 100/448 (22%), Positives = 179/448 (39%), Gaps = 84/448 (18%)
Query: 278 IKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSR 337
+K +++G VP+ + K +++LGF NI R++ + + + + +
Sbjct: 391 VKAWKFGSTWVPVPEKTF--TTLDTSKGIEVLGFFPVENIRRYHLIGEARYVWPDLLSPK 448
Query: 338 ATVAVSALARAMKEMNKVAIVRCVW---RQGQQSV-----VVGVLTPNVSEKINIPDSFY 389
A + SAL AM + R +W +G+ ++ V+ P+ K +I Y
Sbjct: 449 AQIQFSALVEAMHD-------RKIWVLKDRGEPTMGACVPVIENKGPDEEGKPSILPYMY 501
Query: 390 FNVLPFAEDVREFQFPSFSKFPVSWQ---------PNEQQQEAADNLVKMLDL---APSG 437
+ LPFAED R F+FPS + + P ++Q D LV +DL A G
Sbjct: 502 WLKLPFAEDERTFRFPSLTTIKTNTGKILTEHPLLPTKEQSLLMDELVLGMDLDEYAREG 561
Query: 438 KGEI---------------------LQPELTPNPALERFYHHLELKSEHQDAAPPPLDDS 476
K + +P NP + R + S D PL
Sbjct: 562 KRKTQENEEQDVDEQMDEQGQDVTWFKPWEAVNPVIHRIKEAVFHASLTPDLDKDPLGPP 621
Query: 477 LKKITE--PDPTLLAESQSAIDAFCGQFV-IKENPKLKKSTRRFLREKPSGSDEP--NGD 531
++T+ P+ LAE + + + IK+ P+ +K RR +++ G DE N D
Sbjct: 622 HPELTKYFETPSELAEKVKDVTERLKEVLDIKKVPEKRK--RRKAQKEELGEDEGFINED 679
Query: 532 --------------GSVSDAQAVNSMESKPVVTVDK------IGDLTPIQDFEAMMSRRD 571
+ + + P+ K I + +PI DF ++ D
Sbjct: 680 ELFAEPTETKPTTKTELQTQTSSQPTTAAPIQDQSKPKPGRLISNGSPIDDFNRVIQVGD 739
Query: 572 CPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVC 631
KAI+DM + +E+S N+ A++ L +R + +E + +N+ ++ +
Sbjct: 740 V---FRKAIQDMNEVVKENVESSFSRQNFAGAIDCLKLMRSTALGYEEVETYNNCIDSLE 796
Query: 632 KICRKRNFS--TFFDFLMS--KKLSLIS 655
+ + R F F+D+ S K +S IS
Sbjct: 797 QTVKARGFKHPDFWDYFKSAGKSVSKIS 824
>gi|353231766|emb|CCD79121.1| acylaminoacyl-peptidase (S09 family) [Schistosoma mansoni]
Length = 608
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 108/244 (44%), Gaps = 34/244 (13%)
Query: 256 VKVDYEYKSVEDP-------SKVVPPEQRIKGYRYGPQVVPISSAEW-EAVKFKPEKSVK 307
V+V +Y + DP ++P ++G + + + E EAV+ +
Sbjct: 284 VRVHRDYYKIIDPYGSFDPVKDLLPSHDLVRGIKLDGRYICFDKDELTEAVRNIAPVGLH 343
Query: 308 LLGFTDASNILRHYYMKDVN-LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQ 366
LLGF + R+YY++ + ++ E + + +AL +AI V R+GQ
Sbjct: 344 LLGFISQKFLKRYYYIRPAHFIYPDEKSIHGSRLWFTALLNRCLHRKLLAIAIYVQRKGQ 403
Query: 367 QSVVVGVLTPNVSEKIN----------IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQP 416
+V +L +E+ N IP F+ LP+A+D R+ + P+ +
Sbjct: 404 FPRLVALLPQ--AEQTNDDDGANRTQTIPPGFHIIFLPYADDFRDIEIPT------NEIA 455
Query: 417 NEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDS 476
NE Q + A +++ L + P G+I NP L+RFY LE + +++ +D +
Sbjct: 456 NESQVDIAKAMIRKL-MVPFTPGQI------ENPTLQRFYSLLEALALNRETQSEVVDHT 508
Query: 477 LKKI 480
L K+
Sbjct: 509 LPKL 512
>gi|219121746|ref|XP_002181221.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407207|gb|EEC47144.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 517
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 113/250 (45%), Gaps = 25/250 (10%)
Query: 170 ENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKK 229
+ + LL+ ++K+ + V + + K R + T + +L ++ + + V K
Sbjct: 259 DREQLLSSLAEKTGGDVMAVSTLRQILQVDKGRSLKKATKRKIELRIAPGIVLPVRSLKM 318
Query: 230 TGEEKFPTLKKY-------SD--KAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKG 280
+E +KK SD DK +V+ Y + + VV P++ IK
Sbjct: 319 LSKETTLGMKKTAVIGTNKSDTYSTAGNDKAEMDDVRNVYMFVDPDHKDDVVEPQETIKA 378
Query: 281 YRYGPQVVPISSAEWEAVKFKPE--KSVKLLGFTDASNILRHYYMKDVNLFIAEP----- 333
RYG ++P+SS ++E +K +++LG+T + I + I P
Sbjct: 379 VRYGSDLIPMSSYDYEGLKSSANYIPYLEILGYTSRAAI-------PLVALIGPPYALSG 431
Query: 334 GNSR-ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNV 392
+SR A A+SALA++++++++VAI + +G ++G L P + F
Sbjct: 432 SDSRKACAAISALAKSLEQLDRVAICTYMKTKGGDP-ILGGLFPLSEPQFKHAARLMFLQ 490
Query: 393 LPFAEDVREF 402
LPFA D+++
Sbjct: 491 LPFAGDMKQL 500
>gi|347832489|emb|CCD48186.1| BcKU70, protein involved in DNA reparation [Botryotinia fuckeliana]
Length = 649
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 124/608 (20%), Positives = 244/608 (40%), Gaps = 142/608 (23%)
Query: 5 REALLLLLDVSPSMHSVLP--DVEKL-----------CSRLI-QKKLIYGKNHEVGVILF 50
++A+L ++DVS SM + P D +K C+ +I Q+++I +G++L+
Sbjct: 29 KDAVLFVIDVSESMLTPPPPSDSKKADTDSPTLAALKCAHMIMQQRIISSPKDMMGIMLY 88
Query: 51 GTEETE--NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDYMLIKKYGETY 108
GTEET+ ++ + Y H +L D+ + V++LK + + + +LI ET
Sbjct: 89 GTEETKFKDQSGLDTSVYPHCYLLTDLDIPSAKDVRALKEIVEDEEEANKILIPT-EETL 147
Query: 109 K-------------------GKKHLCLITDALCPLKDPDVGTKEDQ--VSTIARQMVAFG 147
G + L +ITD DP G K + + A+ + G
Sbjct: 148 DMNNLLFCANQIFTTRAPNFGSRRLFIITDK----DDPHSGDKSQKSLAAVRAKDLYDIG 203
Query: 148 LRMK------------------NIVVRASLSGEPHM-----------RVIIENDNLLNIF 178
+ ++ +I+ R L+ +P + + + N+ +L++
Sbjct: 204 VVIELFPISTRDHEFDRTKFYDDIIYRDPLAEDPPIVGPNSLKSNGDGLSLLNNLILDVN 263
Query: 179 SKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTL 238
SK+ + ++LF + + G T ++ + + + + VW+ + E+ PTL
Sbjct: 264 SKQVAKRSLFSNLPFEI-GPNLTISVNGYNVLH---KQTPARRTFVWMGGEVPEK--PTL 317
Query: 239 KKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAV 298
+ T + A ED ++V+ + K Y++G V + E + +
Sbjct: 318 E--------TTQMA-------------EDTARVIQKVEIKKAYQFGGSQVLFTPDEQKQL 356
Query: 299 KFKPEKSVKLLGFTDASNI-LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAI 357
K + ++++GF S + K ++ +E +T SAL + + K+ +
Sbjct: 357 KDFGQPGLRIIGFKPQSMLPFWASVHKSTFIYPSEADYVGSTRVFSALWEKLLKDKKMGL 416
Query: 358 VRCVWRQGQQSVVVGV------LTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFP 411
+ R+ +V + L P +++I P + +PFA+D+R P+
Sbjct: 417 GWYIARKNAIPAIVAILPSAEKLDPATNQQI-FPAGLWLYPMPFADDLRSVAAPA----- 470
Query: 412 VSWQPNEQQQEAADNL---VKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDA 468
P E DN+ V+ L L P + + P PNP+L+ Y L+ + +D
Sbjct: 471 ----PIVAPDELIDNMRVVVQQLQL-PKAQYD---PRNYPNPSLQWHYRILQAMALEEDV 522
Query: 469 APPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPS----- 523
P D ++ K + I+ CG ++ + L ++ REK +
Sbjct: 523 PENPEDKTVPKYRQ------------IEKRCGAYINEWGRTLAFEYEKWCREKGNALKRE 570
Query: 524 ---GSDEP 528
G DEP
Sbjct: 571 RDEGIDEP 578
>gi|154289722|ref|XP_001545469.1| hypothetical protein BC1G_16015 [Botryotinia fuckeliana B05.10]
Length = 649
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 124/608 (20%), Positives = 244/608 (40%), Gaps = 142/608 (23%)
Query: 5 REALLLLLDVSPSMHSVLP--DVEKL-----------CSRLI-QKKLIYGKNHEVGVILF 50
++A+L ++DVS SM + P D +K C+ +I Q+++I +G++L+
Sbjct: 29 KDAVLFVIDVSESMLTPPPPSDSKKADTDSPTLAALKCAHMIMQQRIISSPKDMMGIMLY 88
Query: 51 GTEETE--NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDYMLIKKYGETY 108
GTEET+ ++ + Y H +L D+ + V++LK + + + +LI ET
Sbjct: 89 GTEETKFKDQSGLDTSVYPHCYLLTDLDIPSAKDVRALKEIVEDEEEANKILIPT-EETL 147
Query: 109 K-------------------GKKHLCLITDALCPLKDPDVGTKEDQ--VSTIARQMVAFG 147
G + L +ITD DP G K + + A+ + G
Sbjct: 148 DMNNLLFCANQIFTTRAPNFGSRRLFIITDK----DDPHSGDKSQKSLAAVRAKDLYDIG 203
Query: 148 LRMK------------------NIVVRASLSGEPHM-----------RVIIENDNLLNIF 178
+ ++ +I+ R L+ +P + + + N+ +L++
Sbjct: 204 VVIELFPISTRDHEFDRTKFYDDIIYRDPLAEDPPIVGPNSLKSNGDGLSLLNNLILDVN 263
Query: 179 SKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTL 238
SK+ + ++LF + + G T ++ + + + + VW+ + E+ PTL
Sbjct: 264 SKQVAKRSLFSNLPFEI-GPNLTISVNGYNVLH---KQTPARRTFVWMGGEVPEK--PTL 317
Query: 239 KKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAV 298
+ T + A ED ++V+ + K Y++G V + E + +
Sbjct: 318 E--------TTQMA-------------EDTARVIQKVEIKKAYQFGGSQVLFTPDEQKQL 356
Query: 299 KFKPEKSVKLLGFTDASNI-LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAI 357
K + ++++GF S + K ++ +E +T SAL + + K+ +
Sbjct: 357 KDFGQPGLRIIGFKPQSMLPFWASVHKSTFIYPSEADYVGSTRVFSALWEKLLKDKKMGL 416
Query: 358 VRCVWRQGQQSVVVGV------LTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFP 411
+ R+ +V + L P +++I P + +PFA+D+R P+
Sbjct: 417 GWYIARKNAIPAIVAILPSAEKLDPATNQQI-FPAGLWLYPMPFADDLRSVAAPA----- 470
Query: 412 VSWQPNEQQQEAADNL---VKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDA 468
P E DN+ V+ L L P + + P PNP+L+ Y L+ + +D
Sbjct: 471 ----PIVAPDELIDNMRVVVQQLQL-PKAQYD---PRNYPNPSLQWHYRILQAMALEEDV 522
Query: 469 APPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPS----- 523
P D ++ K + I+ CG ++ + L ++ REK +
Sbjct: 523 PENPEDKTVPKYRQ------------IEKRCGAYINEWGRTLAFEYEKWCREKGNALKRE 570
Query: 524 ---GSDEP 528
G DEP
Sbjct: 571 RDEGIDEP 578
>gi|124518454|gb|ABN13872.1| Ku seventy [Aspergillus niger]
gi|134082330|emb|CAK42345.1| unnamed protein product [Aspergillus niger]
Length = 648
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 118/573 (20%), Positives = 223/573 (38%), Gaps = 112/573 (19%)
Query: 5 REALLLLLDVSPSMHSVLPDVE--------------KLCSRLIQKKLIYGKNHEVGVILF 50
++A+L +DVS SM + P + K +Q+++I +GV+LF
Sbjct: 28 KDAVLFAIDVSDSMLTPRPSADPKKHTQESPTTAALKCAYHFMQQRIISNPQDMMGVLLF 87
Query: 51 GTEET----ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL--------------PQG 92
GT+ + E+E ++ Y + + D+ V H V+ L+ L +
Sbjct: 88 GTQASKFFEEDEDSRGDLSYPNCYLFTDLDVPSAHEVKGLRALVDDEGDSREVLSPAKEQ 147
Query: 93 TCAGDYMLIKKYGETYKG----KKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGL 148
+ + T + + L +ITD P D T + A+ + G+
Sbjct: 148 VSMANVLFCANQIFTSRAPNFLSRRLFIITDNDNPHGDDK--TLRSAATVRAKDLYDLGV 205
Query: 149 RM------------KNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLR 196
+ KN SL +P +++D SK ++A + +L
Sbjct: 206 TIELFPISRPEHEFKNSKFYDSLPSDPEAPAYLQSD------SKAATATGDGISLLNTLL 259
Query: 197 GARKTRDISPVTIFRG-DLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHE 255
+ +R + T F LEL +I V Y L++ +AP+ + F
Sbjct: 260 SSINSRTVPRRTHFSNMPLELGPDFRISVSGYI--------LLRR---QAPARNSFIWLN 308
Query: 256 -----VKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLG 310
V S +D + V + K Y++G V S E +A++ E ++++G
Sbjct: 309 GEKPVVAKGVTSHSADDTGRTVEKWEIRKAYKFGGDQVTFSPDEQKALRDFGEPVIRVIG 368
Query: 311 FTDASNI-----LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQG 365
F + + ++H Y ++ +E ++ SAL + + K+A+V + R+G
Sbjct: 369 FKPITALPFWANVKHPYF----IYPSEEDYVGSSRVFSALHQTLLRSKKMALVWFIARKG 424
Query: 366 QQSVVVGVLTPNVSEKIN------IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQ 419
V+ ++ EK++ P + LPFA+D+R+ + + P E
Sbjct: 425 AGPVLAAMIAGE--EKLDENGVQKYPPGMWILPLPFADDIRQNPETTLNVAP------ES 476
Query: 420 QQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKK 479
+ +V+ L L P G + +P PNP+L+ Y L+ + +D P D ++ K
Sbjct: 477 LIDQMRVIVQQLQL-PKG---VYEPLKYPNPSLQWHYRILQALALDEDLPEKPEDKTIPK 532
Query: 480 ITEPDPTLLAESQSAIDAFCGQFVIKENPKLKK 512
+ ID G +V+ +L+K
Sbjct: 533 YRQ------------IDKRAGDYVLSWADELEK 553
>gi|449303204|gb|EMC99212.1| hypothetical protein BAUCODRAFT_395450 [Baudoinia compniacensis
UAMH 10762]
Length = 674
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 122/584 (20%), Positives = 219/584 (37%), Gaps = 99/584 (16%)
Query: 5 REALLLLLDVSPSM-------------HSVLPDVEKL-CS-RLIQKKLIYGKNHEVGVIL 49
++A+L +DVS SM ++ P + L C+ L+Q+++I N +G++L
Sbjct: 31 KDAVLFAIDVSESMLRKPAEGDPKKPDTTLSPTLAALKCAYALMQQRIISNPNDMMGILL 90
Query: 50 FGTEETENELTKEVG----GYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDYMLIKKYG 105
FGTE+++ + E G Y H +L D+ V V+ L+ L + +L+
Sbjct: 91 FGTEKSKFQDGDESGRGGLQYPHCYLLTDLDVPAAADVKQLRSLVEDEAESSDLLVASKE 150
Query: 106 ETYKGKKHLC------------------LITDALCP-----------------LKDPDVG 130
E C L+TD P L D V
Sbjct: 151 EVSMANVLFCANQIFTTKAPNFSSRRLFLVTDNDYPHASNRDARNSAAVRAKDLYDLGVT 210
Query: 131 TKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVD 190
+ +S R + N +V +S+ +P + D I + S+AK
Sbjct: 211 IELFPISHPNRGYTFDRSKFYNDIVYSSMPSDPDAPAPLTAD----IKAASSTAKDGISL 266
Query: 191 STTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDK 250
+ L + + E+ KI V Y ++ P Y P TDK
Sbjct: 267 LQSLLSSVQSRSAMRRAQFSNMPFEIGPGFKISVKGYILVRRQE-PKRTAYIYLPPDTDK 325
Query: 251 ---FATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVK 307
++H V +D ++ V + + +++G + + S E +K + ++
Sbjct: 326 PQIVSSHGTLV------ADDTARTVEKAEVRRAFKFGGETISFSEEELAKIKHFGDPVLR 379
Query: 308 LLGFTDASNILRHYYMKDVNLFI--AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQG 365
++GF + ++K N FI +E +T SAL + + + ++ I + R+
Sbjct: 380 IIGFKPLDMLPIWAHVKQ-NYFIYPSEEDYVGSTRVFSALHQKLLKDQRIGIAWFIPRRN 438
Query: 366 QQSVVVGVLTPNVSEKI-----NIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQ 420
+V L P + +P + LPFA+D+RE K P +
Sbjct: 439 STPALVA-LIPGREHRSEEGEQTLPPGIWIKHLPFADDIREPPQTEVVKAP------DPL 491
Query: 421 QEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKI 480
+A +++ L L + I P PNPAL+ FY L+ + +D D +L +
Sbjct: 492 IDAMRVVIQQLQLPKA----IYDPRKYPNPALQWFYRILQALALEEDLPEQAEDKTLPRW 547
Query: 481 TEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSG 524
+ I GQ+V+ L++ R + RE G
Sbjct: 548 KQ------------IHKRAGQYVVDWGRLLEEHYRLWQRENDRG 579
>gi|256079194|ref|XP_002575874.1| acylaminoacyl-peptidase (S09 family) [Schistosoma mansoni]
Length = 1269
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 118/276 (42%), Gaps = 27/276 (9%)
Query: 217 SEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQ 276
S+ + + + VY + P+ S T + K+ Y S + ++P
Sbjct: 913 SKNLTLGISVYCLVYPTRLPSPIWLSSSDNKTVRVHRDYYKIIDPYGSFDPVKDLLPSHD 972
Query: 277 RIKGYRYGPQVVPISSAEW-EAVKFKPEKSVKLLGFTDASNILRHYYMKDVN-LFIAEPG 334
++G + + + E EAV+ + LLGF + R+YY++ + ++ E
Sbjct: 973 LVRGIKLDGRYICFDKDELTEAVRNIAPVGLHLLGFISQKFLKRYYYIRPAHFIYPDEKS 1032
Query: 335 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN----------I 384
+ + +AL +AI V R+GQ +V +L +E+ N I
Sbjct: 1033 IHGSRLWFTALLNRCLHRKLLAIAIYVQRKGQFPRLVALLPQ--AEQTNDDDGANRTQTI 1090
Query: 385 PDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQP 444
P F+ LP+A+D R+ + P+ + NE Q + A +++ L + P G+I
Sbjct: 1091 PPGFHIIFLPYADDFRDIEIPT------NEIANESQVDIAKAMIRKL-MVPFTPGQI--- 1140
Query: 445 ELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKI 480
NP L+RFY LE + +++ +D +L K+
Sbjct: 1141 ---ENPTLQRFYSLLEALALNRETQSEVVDHTLPKL 1173
>gi|156849195|ref|XP_001647478.1| hypothetical protein Kpol_1018p159 [Vanderwaltozyma polyspora DSM
70294]
gi|156118164|gb|EDO19620.1| hypothetical protein Kpol_1018p159 [Vanderwaltozyma polyspora DSM
70294]
Length = 629
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 66/139 (47%), Gaps = 10/139 (7%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 336
K YRYG V + S+ + +K + + GF D + R+Y + + A+ G
Sbjct: 321 KAYRYGTDYVVLPSSISDERFYKTSPGIDIRGFLDKDLLPRYYLSSESRVIFADTKMGTL 380
Query: 337 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDS------FYF 390
V++ A M E +KVAIVR V + + V + L P++ ++ NI D F
Sbjct: 381 ADVVSMGAFVDVMIENDKVAIVRYVQKPNSE-VEMCALIPHIFKQ-NIGDESEDLRVFIL 438
Query: 391 NVLPFAEDVREFQFPSFSK 409
N LPFAED R FP ++
Sbjct: 439 NRLPFAEDERVSDFPKLTE 457
>gi|255713294|ref|XP_002552929.1| KLTH0D04774p [Lachancea thermotolerans]
gi|238934309|emb|CAR22491.1| KLTH0D04774p [Lachancea thermotolerans CBS 6340]
Length = 602
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 108/261 (41%), Gaps = 33/261 (12%)
Query: 204 ISPVTIFRGDLELS-------------EKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDK 250
+ PV IF+G+L L + + +KV Y T + +L +
Sbjct: 206 VKPVRIFQGELRLGAPISDEDVTGPSYDSITVKVEGYPAT--KAVSSLNRRVVAKSEDGT 263
Query: 251 FATHEVKVDYEYKSVEDPS------KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEK 304
F VK EY++++D V E K YRYG V + A +K +
Sbjct: 264 FGP--VKSVIEYEAIDDGEDSEGGVASVSKEYVTKAYRYGSDYVVLPQAIESERTYKTKP 321
Query: 305 SVKLLGFTDASNILRHYYMKDVNLFI-AEPGNSRAT-VAVSALARAMKEMNKVAIVRCVW 362
+ L GF +I RH+ + I A +RA V+ SAL +M ++ K AI R V
Sbjct: 322 GLDLRGFVGNESIPRHFLSSESTFIIPATKDGTRADFVSFSALVDSMIKLRKFAIARYVQ 381
Query: 363 R---QGQQSVVVGVLTPNVSEKINIPDSF----YFNVLPFAEDVREFQFPSFSKFPVSWQ 415
+ + Q ++ +L P ++ +++ N LPFAED R +P ++ S
Sbjct: 382 KLNGEVQMCLLCPILIPKKRKEPGDDETYTRALVLNRLPFAEDERCSDYPRLAQAAASSD 441
Query: 416 PNEQQQEA-ADNLVKMLDLAP 435
+ +A L+ +DL P
Sbjct: 442 AETAEIDALMGELIDTMDLGP 462
>gi|340054033|emb|CCC48327.1| putative KU80 protein [Trypanosoma vivax Y486]
Length = 617
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 11/164 (6%)
Query: 296 EAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAE-PGNSRATVAVSALARAMKEMNK 354
EAVK + + ++ + + + D + I P + A ++ RAM +
Sbjct: 311 EAVKIRGPRGLEAISCVSLKEVPVWLLVGDGSRTITPLPNDLTGAKAFRSIVRAMAQNGL 370
Query: 355 VAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSW 414
+VR V+ Q + V+GV P+ E D +F+ LPFAEDVR +FP + VS
Sbjct: 371 AMVVRYVYIQ-DANPVLGVCVPSSDEG---RDVLFFSALPFAEDVRHLKFPDYDSMGVSV 426
Query: 415 QPNEQQQEAA--DNLVKMLDLAPSGKGEILQPELTPNPALERFY 456
+ ++E A ++V + + P ++L P T NP L++ Y
Sbjct: 427 GESVMEEEEALVASVVDGMTVGP----DVLNPHQTFNPFLQQLY 466
>gi|397576290|gb|EJK50171.1| hypothetical protein THAOC_30890 [Thalassiosira oceanica]
Length = 584
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 119/262 (45%), Gaps = 22/262 (8%)
Query: 266 EDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVK---FKPEKSVKLLGFTDASNILRHYY 322
+D + VP +R YRYG +VP+ + + +K F +K +++G+ D ++++
Sbjct: 308 KDSAVEVPIAKRTNAYRYGSDLVPVGKMDEDGLKAPFFSDKKLTEVMGYLDKNDVVNSNL 367
Query: 323 MKDVNLFIAEPGNS-RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEK 381
+ I S R A++AL++A++E +KVA + + ++ + +VG L P + K
Sbjct: 368 LAGPTYAIFGGDKSVRGRTAIAALSQALEETDKVAFCK-LKKEKKSEPIVGALFPKIQGK 426
Query: 382 INIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNE-----QQQEAADNLVKMLDLAPS 436
+ S N + E + SK QP E ++ +A D ++ + +A
Sbjct: 427 DDGAGSSQQNGGRYLEFIALPYVGDLSKMVSRRQPEEYRGTVEEDKACDEMIDAMMIADC 486
Query: 437 --GKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPL-DDSLKKITEPDP-------- 485
+I P ++ N + + + KS + + L D++++K+ + P
Sbjct: 487 DFNSFDISVPAMSANHKMVAHF-ATDPKSAKDETSKEGLPDNTIRKVAQAMPLCEYDVPI 545
Query: 486 TLLAESQSAIDAFCGQFVIKEN 507
+ +S+ +D F +F + EN
Sbjct: 546 IIAKKSKKEVDVFISKFPLIEN 567
>gi|401411521|ref|XP_003885208.1| hypothetical protein NCLIV_056045 [Neospora caninum Liverpool]
gi|325119627|emb|CBZ55180.1| hypothetical protein NCLIV_056045 [Neospora caninum Liverpool]
Length = 1064
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 79/192 (41%), Gaps = 38/192 (19%)
Query: 276 QRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGN 335
R+ YRYG Q+V +S+ E +A K + E + +LG T I R + + N
Sbjct: 419 HRLYAYRYGKQLVAVSAVEQQAFKEQTEAGLVVLGVTRRDGIQRWWNLGPAEYVTCALNN 478
Query: 336 SRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVS---------------- 379
+ VA+ +L A++ ++ V + VWR G + +V +L P+V
Sbjct: 479 RPSLVALRSLVLALERLDSVLLCSFVWRAGYPAKLVALL-PHVGGREAGRRPLSDSWQAS 537
Query: 380 -----EKINIPD---------SFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAAD 425
EK + D + LP AED+ E + PS S Q +A +
Sbjct: 538 EAIKREKEELDDDTREDDWTYGLHLIYLPVAEDMLELRLPSLPSVTPS------QLQAVE 591
Query: 426 NLVKMLDLAPSG 437
L+ L L P G
Sbjct: 592 TLIDSLTL-PDG 602
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 67/137 (48%), Gaps = 33/137 (24%)
Query: 554 IGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSN------------------ 595
+ + P++DF+ ++ ++ D +KAI++M + I+ L +
Sbjct: 882 VNSVNPVRDFQRLLEVKET-DLTEKAIQEMTDMIWRFLRAAGGPPGVTLATPPESASGLD 940
Query: 596 -EGIN-------YPKAVELLVALRKGCILEQEPKQFNDVLEKV-CKICRKR-----NFST 641
EG++ KA+ + ALR+GC E E +FN+ L ++ ++ R+ F T
Sbjct: 941 TEGLHNFRRQQHLGKALVCVEALREGCRKELEGAKFNEFLGELKAELSREHEPTDDGFRT 1000
Query: 642 FFDFLMSKKLSLISKSE 658
F++ L S+++ LI+ +E
Sbjct: 1001 FWNLLKSRQVGLITHAE 1017
>gi|113913537|gb|ABI48912.1| YKU80 [Saccharomyces pastorianus]
Length = 621
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 77/169 (45%), Gaps = 10/169 (5%)
Query: 269 SKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNL 328
S ++ + K YRYG V + S E ++ + L GF D + R+Y + +
Sbjct: 305 SAIISKDSVTKAYRYGADYVVLPSVLVEQTVYETFPGMDLRGFLDREALPRYYLTSESSF 364
Query: 329 FIAEP--GNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN--- 383
+A+ G +A SAL M E KVA+ R V R+ + V + L P + E+ +
Sbjct: 365 IVADTRLGCLSDAMAFSALVDVMLENRKVAVARYVSRKDSE-VTMCALCPVLIEQEDNER 423
Query: 384 -IPDSFYFNVLPFAEDVREFQFPS-FSKFPVSWQP--NEQQQEAADNLV 428
+ S LPFAED R FP ++ S P NE ++ D+L+
Sbjct: 424 KVVRSLISCRLPFAEDERVTDFPKLLNRTTTSGVPLKNETDEDQIDDLM 472
>gi|363749599|ref|XP_003645017.1| hypothetical protein Ecym_2476 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888650|gb|AET38200.1| Hypothetical protein Ecym_2476 [Eremothecium cymbalariae
DBVPG#7215]
Length = 611
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 138/353 (39%), Gaps = 68/353 (19%)
Query: 202 RDISPVTIFRGDLELSEKMK-------------IKVWVY--------------KKTGEEK 234
R I PV +F+G L L K I V Y +KT +
Sbjct: 200 RPIKPVRVFQGQLRLGADFKNLESCQDDPYCMCINVEGYPATKAVTSLSRKQVQKTEDGS 259
Query: 235 FPTLKKYSDKAPSTDKFATHE--VKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISS 292
+ LK S ++ HE K D EY+++ V + +K +RYG + +
Sbjct: 260 YIPLK-------SVVEYEIHEPSEKEDQEYEAI-----TVSKDHIVKAFRYGADYISLPD 307
Query: 293 AEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNSRATVAVSALARAMK 350
++ + + GF D N+ R Y + IA+ G+ +A SAL AM
Sbjct: 308 VLASERIYQTTPGLDIRGFIDLFNVPRQYLCGESVYIIADTREGSEADFMAFSALVDAMI 367
Query: 351 EMNKVAIVRCVWRQGQ--QSVVVGVLTPNVSEKINIPD--------SFYFNVLPFAEDVR 400
K+AI R V + Q VV+ L + K D + LPFAED R
Sbjct: 368 TSKKLAIARYVQKNNSEVQMVVLCPLLVGSNLKKRTSDNPEAEPKRALVLCRLPFAEDER 427
Query: 401 EFQFPSFS-KFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHL 459
F F+ K+P +E D LV ++D+ + N +++ F +
Sbjct: 428 ACDFLPFTNKYP----KDEDMDAKMDQLVDLMDMDSDATEHHSETSWCSNSSIQPFTSFM 483
Query: 460 ELKSEHQDAAPPPLDDSLKKITE----PDPTLLAESQSAIDAFCGQFVI-KEN 507
+ + P P D +L+++++ P + + Q +D F +F++ +EN
Sbjct: 484 K-----DSSLPLPSDPNLQEVSDPICIPAIAIHRQKQVLLDYFHQRFILGQEN 531
>gi|317035392|ref|XP_001396808.2| ATP-dependent DNA helicase II subunit 1 [Aspergillus niger CBS
513.88]
Length = 653
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 116/578 (20%), Positives = 225/578 (38%), Gaps = 117/578 (20%)
Query: 5 REALLLLLDVSPSMHSVLPDVE--------------KLCSRLIQKKLIYGKNHEVGVILF 50
++A+L +DVS SM + P + K +Q+++I +GV+LF
Sbjct: 28 KDAVLFAIDVSDSMLTPRPSADPKKHTQESPTTAALKCAYHFMQQRIISNPQDMMGVLLF 87
Query: 51 GTEET----ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL--------------PQG 92
GT+ + E+E ++ Y + + D+ V H V+ L+ L +
Sbjct: 88 GTQASKFFEEDEDSRGDLSYPNCYLFTDLDVPSAHEVKGLRALVDDEGDSREVLSPAKEQ 147
Query: 93 TCAGDYMLIKKYGETYKG----KKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGL 148
+ + T + + L +ITD P D T + A+ + G+
Sbjct: 148 VSMANVLFCANQIFTSRAPNFLSRRLFIITDNDNPHGDDK--TLRSAATVRAKDLYDLGV 205
Query: 149 RMK-----------------NIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDS 191
++ + ++ SL +P +++D SK ++A +
Sbjct: 206 TIELFPISRPEHEFKNSKFYDDIIYKSLPSDPEAPAYLQSD------SKAATATGDGISL 259
Query: 192 TTSLRGARKTRDISPVTIFRG-DLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDK 250
+L + +R + T F LEL +I V Y L++ +AP+ +
Sbjct: 260 LNTLLSSINSRTVPRRTHFSNMPLELGPDFRISVSGYI--------LLRR---QAPARNS 308
Query: 251 FATHE-----VKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKS 305
F V S +D + V + K Y++G V S E +A++ E
Sbjct: 309 FIWLNGEKPVVAKGVTSHSADDTGRTVEKWEIRKAYKFGGDQVTFSPDEQKALRDFGEPV 368
Query: 306 VKLLGFTDASNI-----LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRC 360
++++GF + + ++H Y ++ +E ++ SAL + + K+A+V
Sbjct: 369 IRVIGFKPITALPFWANVKHPYF----IYPSEEDYVGSSRVFSALHQTLLRSKKMALVWF 424
Query: 361 VWRQGQQSVVVGVLTPNVSEKIN------IPDSFYFNVLPFAEDVREFQFPSFSKFPVSW 414
+ R+G V+ ++ EK++ P + LPFA+D+R+ + + P
Sbjct: 425 IARKGAGPVLAAMIAGE--EKLDENGVQKYPPGMWILPLPFADDIRQNPETTLNVAP--- 479
Query: 415 QPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLD 474
E + +V+ L L P G + +P PNP+L+ Y L+ + +D P D
Sbjct: 480 ---ESLIDQMRVIVQQLQL-PKG---VYEPLKYPNPSLQWHYRILQALALDEDLPEKPED 532
Query: 475 DSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKK 512
++ K + ID G +V+ +L+K
Sbjct: 533 KTIPKYRQ------------IDKRAGDYVLSWADELEK 558
>gi|237830351|ref|XP_002364473.1| hypothetical protein TGME49_112510 [Toxoplasma gondii ME49]
gi|211962137|gb|EEA97332.1| hypothetical protein TGME49_112510 [Toxoplasma gondii ME49]
Length = 1107
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 109/539 (20%), Positives = 192/539 (35%), Gaps = 153/539 (28%)
Query: 33 IQKKLIYGKNHEVGVILFGTEETENELTKEVG------------GYEHVKVLQDIKVVDG 80
+Q+ +VGV+ FG+ T+N L G GY+HV+V +
Sbjct: 101 VQRLAATSAKVDVGVVCFGSCRTDNPLAPVEGDIQPGDTGDAEEGYKHVEVSLRPESASW 160
Query: 81 HLVQSLKHLPQGTCAGDY---------MLIKKYGETYKGKKHLCLITDALCPLKDPDVGT 131
LVQ L+ + D M+ K YG + ++ + + C T
Sbjct: 161 KLVQELEKVKNSANRSDAIDGLVVAVDMVEKTYGPKLS-QNNVSFLVFSDC---QSSPAT 216
Query: 132 KEDQVSTIARQMVAFGLRMKNIVVRASLS--------GEPHMRVIIENDNLLNIFSKKSS 183
ED + + ++ G+R+ I+V S+ G+P R+ N + ++ +
Sbjct: 217 PED-IPAVRDRLEVLGIRVHFIIVDGSVPTHPGIWRPGDPSARL---NQHFVSPLRPALA 272
Query: 184 AKTLFVDSTTSLRGARKTRDISPV--------TIFRGDLELSEKMKIKVWVYKKTGEEKF 235
+ +L + LR + ++ T R +LE+S+ I V+V+ +T +E
Sbjct: 273 SLSLVASTLIPLRSFLASPFMTAFYPPPKRLSTKCRVNLEVSKAFLIPVYVFVRTRKEPV 332
Query: 236 -------------PTLKKYSDKAPS----TDKFAT--------------HEVKVDYEYKS 264
P ++ +D P D F ++KV+ Y
Sbjct: 333 PTLRKRVFVGVSRPATRRRTDSVPREDTPGDAFGAEKTRNDQGEHDEDWRDLKVERFYFR 392
Query: 265 VEDPS----KVVPPE---------------------------------QRIKGYRYGPQV 287
DP K+ P+ QR+ YRYG Q+
Sbjct: 393 ANDPERTPVKLGEPDTRQRDGTSIFGRPDGSSEDERAPGAGGDAGVHIQRLYAYRYGKQL 452
Query: 288 VPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALAR 347
V +S E +A K + + +LG T +I R + + N + VA+ +L
Sbjct: 453 VAVSGVEQQAFKQQTTAGLVVLGVTRRDSIQRWWNLGPPEYVTCALNNRPSLVALRSLVL 512
Query: 348 AMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVS-------------------------EKI 382
A++ ++ V + VWR G + +V +L P+V E+
Sbjct: 513 ALQRLDSVLLCSFVWRGGYPAKLVALL-PHVGGGNREKRKAWQATASLKESDDVKREEET 571
Query: 383 NIPDS--------FYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDL 433
N ++ + LP AED+ E + PS +Q A + LV+ L L
Sbjct: 572 NQKEAGDEDKTYGLHLIYLPVAEDMLELRLPSLPSV------TPRQLRAVETLVESLTL 624
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 65/136 (47%), Gaps = 32/136 (23%)
Query: 554 IGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLL---------------------- 591
+ + P++DF+ ++ ++ D +KAI++M IF L
Sbjct: 925 VHSVNPVRDFQRLLEVKET-DLTEKAIQEMTEMIFKFLRAAGPPQGALERPTGAGRGGET 983
Query: 592 ---ENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKV-CKICRK-----RNFSTF 642
+N + KA+ + ALR+GC E E ++FN+ L +V + CR +F TF
Sbjct: 984 SGLQNFRRQQHLGKALVCVEALREGCRRELEGEKFNEFLAEVKAEQCRADAAADDSFRTF 1043
Query: 643 FDFLMSKKLSLISKSE 658
++ L S+K+ LI+ +E
Sbjct: 1044 WNLLKSRKIGLITHAE 1059
>gi|326483178|gb|EGE07188.1| Ku70 protein [Trichophyton equinum CBS 127.97]
Length = 668
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 116/267 (43%), Gaps = 35/267 (13%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSR 337
K Y++G + + + E ++ E ++++LGF S++ MK L+ +E G
Sbjct: 342 KAYKFGGEQISFTQEEQAEIRNFGEPTIRILGFKPLSSLPIWASMKHPTFLYPSEEGYVG 401
Query: 338 ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN------IPDSFYFN 391
+T SAL + + + +K+A+V V R+ V+ ++ EK++ IP +
Sbjct: 402 STRTFSALHQTLLKQSKMALVWFVPRRNAAPVMAAMIA--GEEKLDENGEQTIPPGMWIL 459
Query: 392 VLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV-KMLDLAPSGKGEILQ--PELTP 448
LPFA+D+R+ P A D+L+ KM + + + Q P+ P
Sbjct: 460 PLPFADDIRQ-------------NPETNHITAPDSLINKMRPIIRQLQLQNAQYDPQRYP 506
Query: 449 NPALERFYHHLELKSEHQDAAPPPLD---------DSLKKITEPDPTLLAESQSAID-AF 498
NP+L+ Y L+ + +D P D D + ++ P P E A D
Sbjct: 507 NPSLQWHYKILQALALDEDLPEEPEDKTKPKYKAIDKVDDVSAPAPRNFLERHQANDMQR 566
Query: 499 CGQFVIKENPKLKKSTRRFLREKPSGS 525
G VI+ +L+ R + +P+ S
Sbjct: 567 TGDLVIEWGEELEAQYRALEKSQPATS 593
>gi|213972572|ref|NP_001135434.1| ATP-dependent DNA helicase II [Nasonia vitripennis]
Length = 579
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 117/278 (42%), Gaps = 30/278 (10%)
Query: 275 EQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKLLGFTDASNI-LRHYYMKDVNLFIAE 332
E I GY+YG + +P S + A+K+ K + + GF + L + L + E
Sbjct: 296 ENIINGYKYGGKYIPFSDDDEVAMKYSGSIKGMMVYGFVPQDEVQLECWTGSGSRLIVPE 355
Query: 333 PGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNV 392
N VA +L +AM E AIVR V+ +GVL P V + D + V
Sbjct: 356 TDND--AVAFYSLVQAMVEKRYAAIVRKVYANNNLP-RMGVLFPKV-----VYDDVWGFV 407
Query: 393 ---LPFAEDVREFQFPSFSKFPVS---WQPNEQQQEAADNLVKMLDLAPSGKGEILQPEL 446
LPF D+R Q K P+ N+++ +A D+ + + + E L P +
Sbjct: 408 HIELPFVTDLRIIQ-----KRPIQSLDGTVNKEKLDALDDFIDAMTIV-DNDPEYLNPGM 461
Query: 447 TPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQF---- 502
PN + ++ + + + A PL+ LKK EP L + ++ + F
Sbjct: 462 FPNVINQYHWNAIADRVLNPKGALLPLNGYLKKFLEPPEYLNDKVKTHYEKLRKLFGNIN 521
Query: 503 VIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAV 540
+ KE K KKS R P ++EP G+ D +
Sbjct: 522 MHKETTKDKKSARV----APKIANEPEKTGATKDILTI 555
>gi|326475016|gb|EGD99025.1| Ku70/Ku80 beta-barrel domain-containing protein [Trichophyton
tonsurans CBS 112818]
Length = 646
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 112/257 (43%), Gaps = 37/257 (14%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSR 337
K Y++G + + + E ++ E ++++LGF S++ MK L+ +E G
Sbjct: 342 KAYKFGGEQISFTQEEQAEIRNFGEPTIRILGFKPLSSLPIWASMKHPTFLYPSEEGYVG 401
Query: 338 ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN------IPDSFYFN 391
+T SAL + + + +K+A+V V R+ V+ ++ EK++ IP +
Sbjct: 402 STRTFSALHQTLLKQSKMALVWFVPRRNAAPVMAAMIA--GEEKLDENGEQTIPPGMWIL 459
Query: 392 VLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV-KMLDLAPSGKGEILQ--PELTP 448
LPFA+D+R+ P A D+L+ KM + + + Q P+ P
Sbjct: 460 PLPFADDIRQ-------------NPETNHITAPDSLINKMRPIIRQLQLQNAQYDPQRYP 506
Query: 449 NPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENP 508
NP+L+ Y L+ + +D P D + K AID G VI+
Sbjct: 507 NPSLQWHYKILQALALDEDLPEEPEDKTKPKY------------KAIDKRTGDLVIEWGE 554
Query: 509 KLKKSTRRFLREKPSGS 525
+L+ R + +P+ S
Sbjct: 555 ELEAQYRALEKSQPATS 571
>gi|389749569|gb|EIM90740.1| Ku DNA-binding complex Ku70 subunit [Stereum hirsutum FP-91666 SS1]
Length = 648
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 94/208 (45%), Gaps = 42/208 (20%)
Query: 269 SKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKP---EKSVKLLGFTDASNIL-----RH 320
++VVPP R+ +AE E KF+ E S+KLLGF D +L +H
Sbjct: 355 TRVVPPNTRV-----------FYTAE-EIKKFRSLGLEPSIKLLGFKDKDQLLFEDNIKH 402
Query: 321 YYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSE 380
Y ++ E + + VSAL ++M + +K+ +V ++R+G + +L E
Sbjct: 403 SYF----IYPDEMAYTGSKRTVSALIKSMAKKDKIGLVLALFRRGSSPIFCAMLAQK--E 456
Query: 381 KINI-----PDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAP 435
KI P F+ LPFA+D+R P F P E + A ++K
Sbjct: 457 KIEAGGWREPGGFHLIPLPFADDIR--AAPIEEGFIA---PKELSRLAETFVLKCSLKDK 511
Query: 436 SGKGEILQPELTPNPALERFYHHLELKS 463
G P+ PNPAL+ +HH +L++
Sbjct: 512 KG----YSPDTYPNPALQ--FHHEQLQA 533
>gi|159489188|ref|XP_001702579.1| DNA binding protein [Chlamydomonas reinhardtii]
gi|158280601|gb|EDP06358.1| DNA binding protein [Chlamydomonas reinhardtii]
Length = 1076
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 9 LLLLDVSPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENEL---TKEVGG 65
+L+LDV P M LP + +L ++ KL++ HEV V+L+GTE T +EL +
Sbjct: 10 VLVLDVGPHMQPYLPLLHRLVFNVLNTKLLFKPLHEVAVVLYGTEGTRHELHDPSDAAST 69
Query: 66 YEHVKVLQDIKVV 78
Y HV VL+ ++ V
Sbjct: 70 YPHVTVLRPLQAV 82
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 63/138 (45%), Gaps = 10/138 (7%)
Query: 278 IKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNIL--RHYYMKDVNLFIAEPGN 335
++GY +G QVVP+ + + K LLGF L RH + + ++ +
Sbjct: 488 VRGYNFGAQVVPVDEVTAATAQLQFAKDFSLLGFAPEPLALVPRHRLVAEPSVVVGADAT 547
Query: 336 SRATVAVSA------LARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFY 389
+ A +A A L AI R R ++V+ LTP++S ++PD
Sbjct: 548 ATAALAALARAMDAPLVAGGPRPGTGAIARLKNRAAIPALVL--LTPHLSHSPDVPDCLL 605
Query: 390 FNVLPFAEDVREFQFPSF 407
+ LP+ ED+R F FP+F
Sbjct: 606 LSPLPYFEDIRTFFFPTF 623
>gi|302507648|ref|XP_003015785.1| hypothetical protein ARB_06096 [Arthroderma benhamiae CBS 112371]
gi|291179353|gb|EFE35140.1| hypothetical protein ARB_06096 [Arthroderma benhamiae CBS 112371]
Length = 627
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 111/257 (43%), Gaps = 37/257 (14%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSR 337
K Y++G + V + E ++ E ++++LGF S++ MK L+ +E G
Sbjct: 342 KAYKFGGEQVSFTQEEQAEIRNFGEPTIRILGFKPLSSLPIWASMKHPTFLYPSEEGYVG 401
Query: 338 ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN------IPDSFYFN 391
+T SAL + + + K+A+V V R+ V+ ++ EK++ IP +
Sbjct: 402 STRTFSALHQTLLKQKKMALVWFVPRRNAAPVMAAMIA--GEEKLDENGEQTIPPGMWIL 459
Query: 392 VLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV-KMLDLAPSGKGEILQ--PELTP 448
LPFA+D+R+ P A D+L+ KM + + + Q P+ P
Sbjct: 460 PLPFADDIRQ-------------NPETNHITAPDSLINKMRPIIRQLQLQNAQYDPQRYP 506
Query: 449 NPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENP 508
NP+L+ Y L+ + +D P D + K AID G VI+
Sbjct: 507 NPSLQWHYKILQALALDEDLPEEPEDKTKPKY------------KAIDKRTGDLVIEWGE 554
Query: 509 KLKKSTRRFLREKPSGS 525
+L+ R + +P+ S
Sbjct: 555 ELETQYRALEKSQPATS 571
>gi|393221301|gb|EJD06786.1| ku70-like protein [Fomitiporia mediterranea MF3/22]
Length = 644
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 123/559 (22%), Positives = 199/559 (35%), Gaps = 114/559 (20%)
Query: 5 REALLLLLDVSPSMHSVLPDVEKLCS-------------RLIQKKLIYGKNHEVGVILFG 51
R+ +L +D S SM + D K S +L ++K++ G N G++LF
Sbjct: 28 RDIILFAIDCSESMQAFHDDSNKEGSQTSHLFAALQAAMKLQKRKVVVGPNDAAGILLFN 87
Query: 52 TEETENELTKEVGGYEH-VKVLQDIKVVDGHLVQSL----------------------KH 88
T + + Y+ V + + +D +Q+L K
Sbjct: 88 TSRKSENMERGATEYKSGTFVYEPVGQIDAPKIQNLIQLLHEAKDNHKWLRYEFPPSEKQ 147
Query: 89 LPQGTCAGDYMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGL 148
+P G + G G K + LITD DP G K Q+ T A Q L
Sbjct: 148 VPLGDVFTSCNWALRDGMPKSGIKRIFLITDE----DDPHPGAKNAQLVTSA-QTTLLDL 202
Query: 149 RMKNIVVR-----------------ASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDS 191
+ V +++ G E+D LL + + V
Sbjct: 203 TQAGVSVEPFFISTEEKSFDPTKFYSAVLGSSLEEEAEESDGLL--------SDAISVSR 254
Query: 192 TTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKF 251
L + R++ +F EL + I V Y E+K K + D +
Sbjct: 255 IDDLLAQMRFREMPKRALFSIPFELGDGFVIGVKGYGLVTEQKKGHYKYFMDMGDRLEVV 314
Query: 252 ATHEVKVDYEYKSVEDPSKVV------PPEQRIKGYRYGPQVVPISSAEW----EAVKFK 301
+ VD + D +KV+ PP + + YG +VVP S + E F+
Sbjct: 315 EPKTLYVDENEQREIDKTKVMYGMQLGPPAEENEDEEYGVRVVPKRSKVFYTAEEVRAFR 374
Query: 302 P---EKSVKLLGFTDASNI-----LRHYYMKDVNLFIA--EPGNSRATVAVSALARAMKE 351
+KLLGF D + + +RH +LFI E S + +AL + +K+
Sbjct: 375 TLGLSPGLKLLGFKDETELAIEDNVRH------SLFIYPDEQNYSGSKRTFTALLKTLKK 428
Query: 352 MNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINI---PDSFYFNVLPFAEDVREFQFPSFS 408
K+ +VR + R + + E N P F+ PFA+D+R +
Sbjct: 429 KRKIGLVRALLRSNSSPMFCALCPQEEKEDENGFVEPAGFHLIPYPFADDLRA------A 482
Query: 409 KFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDA 468
+ + + A + L + G P+ PNPAL Y LE + ++
Sbjct: 483 PIEQGVRASTDALDVAKQWISKLQIKSGG----YPPDANPNPALAFHYAQLEASAFREEY 538
Query: 469 APPPLDDSLKKITEPDPTL 487
P D+ K DPTL
Sbjct: 539 DP----DTFK-----DPTL 548
>gi|112362647|emb|CAL35988.1| HDF2 protein [Saccharomyces bayanus]
gi|112362649|emb|CAL35987.1| HDF2 protein [Saccharomyces bayanus]
gi|112362651|emb|CAL35986.1| HDF2 protein [Saccharomyces bayanus]
gi|112362653|emb|CAL35985.1| HDF2 protein [Saccharomyces bayanus]
Length = 621
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 74/160 (46%), Gaps = 10/160 (6%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 336
K YRYG V + S + ++ + L GF D + R+Y + + +A+ G
Sbjct: 315 KAYRYGADYVVLPSVLVDQTVYETFPGMDLRGFLDREALPRYYLTSESSFIVADTRLGCL 374
Query: 337 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN----IPDSFYFNV 392
++A SAL M E K+A+ R V R+ + V + L P + E+ + S
Sbjct: 375 SDSMAFSALVDVMLENRKIAVARYVSRKDSE-VTMCALCPVLIEQAGSERKVVRSLISCR 433
Query: 393 LPFAEDVREFQFPS-FSKFPVSWQP--NEQQQEAADNLVK 429
LPFAED R FP ++ S P NE ++ D+L++
Sbjct: 434 LPFAEDERVTDFPKLLNRTTTSGVPLKNEADEDQIDDLME 473
>gi|242817824|ref|XP_002487023.1| DSB repair complex subunit Ku70, putative [Talaromyces stipitatus
ATCC 10500]
gi|218713488|gb|EED12912.1| DSB repair complex subunit Ku70, putative [Talaromyces stipitatus
ATCC 10500]
Length = 654
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 118/575 (20%), Positives = 224/575 (38%), Gaps = 87/575 (15%)
Query: 5 REALLLLLDVSPSMHSVLPDVE-------------KLCSRLIQKKLIYGKNHEVGVILFG 51
++A+L +D+S SM P K L+Q+++I +GV+ +G
Sbjct: 29 KDAILFAIDISDSMLMDRPSESNKGQPQSPAKAAIKCAYHLMQQRIISNPKDMMGVLFYG 88
Query: 52 TEETE--NELTKEVGG--YEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDYMLIKKYGET 107
TE + +E GG Y H + D++V D + V+SL+ L + + +L+
Sbjct: 89 TEASRFYDEDENSCGGLSYPHCYLFTDLEVPDANDVKSLRALAEDDDEAEQILVSSKERV 148
Query: 108 YKGKKHLC-----------LITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVR 156
C ++ L + D D +D+ A + A L +++
Sbjct: 149 SMANVLFCANQIFTSKASNFLSRRLFIITDSDNPHADDRTMRSAATVRAKDLYDLGVIIE 208
Query: 157 ASLSGEPHMRVIIEN--DNLLNIFSKKSSAKTLFVDSTTSLRGAR--------------K 200
P D+++ + + F + T + A
Sbjct: 209 LFPISRPDHEFDRSKFYDDIIYKTAPGDPEASAFTAAGTQVPNASGDGISLLNSLLSSVN 268
Query: 201 TRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKY---SDKAPSTDKFATHEVK 257
+R + +F+ LE S KI V Y ++ P+ Y + P K T V
Sbjct: 269 SRSVPRRALFKIPLEFSPDFKISVTGYLIFKRQE-PSRSCYVWLGGEKPELAKGTTTHV- 326
Query: 258 VDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI 317
+D ++ V + K Y++G + + ++ E ++ + ++++GF S++
Sbjct: 327 -------ADDTARTVEKGEIRKAYKFGGEQISFTAEEQAKLRNFGDPVIRIIGFKPRSSL 379
Query: 318 LRHYYMKDVN-LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTP 376
+K ++ +E +T SAL + + + K+ IV + R+ V+ +L
Sbjct: 380 PIWASIKHPTFIYPSEDEFVGSTRVFSALHQKLLKDEKIGIVWFIARKNATPVLAAMLAG 439
Query: 377 NVSEKIN------IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKM 430
EK++ +P + LPFA+D+R Q P + V+ +P +V+
Sbjct: 440 E--EKLDDNGVQFLPPGLWILPLPFADDIR--QNPE-TNLVVAPEPLIDHMR---TIVQQ 491
Query: 431 LDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAE 490
L L P + P PNPAL+ Y L+ + LD+ L + E D T+
Sbjct: 492 LQL-PKAQ---YDPRKYPNPALQWHYRILQALA---------LDEELPEQAE-DKTIPRY 537
Query: 491 SQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGS 525
Q ID G +V++ +L+K ++ +P S
Sbjct: 538 KQ--IDKRAGDYVLEWGEELEKQHQKMYTGQPKTS 570
>gi|327298311|ref|XP_003233849.1| Ku70/Ku80 beta-barrel domain-containing protein [Trichophyton
rubrum CBS 118892]
gi|326464027|gb|EGD89480.1| Ku70/Ku80 beta-barrel domain-containing protein [Trichophyton
rubrum CBS 118892]
Length = 646
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 111/257 (43%), Gaps = 37/257 (14%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSR 337
K Y++G + V + E ++ E ++++LGF S++ MK L+ +E G
Sbjct: 342 KAYKFGGEQVSFTQEEQAEIRNFGEPTIRILGFKPLSSLPIWASMKHPTFLYPSEEGYVG 401
Query: 338 ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN------IPDSFYFN 391
+T SAL + + + +K+A+V V R+ V+ ++ EK++ IP +
Sbjct: 402 STRTFSALHQTLLKQSKMALVWFVPRRNAAPVMAAMIA--GEEKLDDNGEQTIPPGMWIL 459
Query: 392 VLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV-KMLDLAPSGKGEILQ--PELTP 448
LP+A+D+R+ P A D+L+ KM + + + Q P P
Sbjct: 460 PLPYADDIRQ-------------NPETNHITAPDSLINKMRPIIRQLQLQNAQYDPRRYP 506
Query: 449 NPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENP 508
NP+L+ Y L+ + +D P D + K AID G VI+
Sbjct: 507 NPSLQWHYKILQALALEEDLPEKPEDKTKPKY------------KAIDKRTGDLVIEWGE 554
Query: 509 KLKKSTRRFLREKPSGS 525
+L+ R + +P+ S
Sbjct: 555 ELEAQYRALEKSQPATS 571
>gi|367022532|ref|XP_003660551.1| hypothetical protein MYCTH_2298998 [Myceliophthora thermophila ATCC
42464]
gi|347007818|gb|AEO55306.1| hypothetical protein MYCTH_2298998 [Myceliophthora thermophila ATCC
42464]
Length = 645
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 97/220 (44%), Gaps = 21/220 (9%)
Query: 265 VEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI-LRHYYM 323
V+ ++ V + K Y++G + + E A+K K ++L+GF S + +
Sbjct: 322 VDSTTRTVDKSEVKKAYKFGGEYIYFKPEEAAALKNLGSKVLRLIGFKPRSLLPMWASVK 381
Query: 324 KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGV-----LTPNV 378
K + +F +E +T SAL + + E +KV I V R+ +V + L
Sbjct: 382 KSIFIFPSEEHYVGSTRVFSALWQKLLEADKVGIAWFVARENAHPSMVAIIPSRALDDGS 441
Query: 379 SEKINIPDSFYFNVLPFAEDVR--EFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPS 436
SE +P + LPFA+DVR + P +P ++ + +V+ L L +
Sbjct: 442 SETPYLPAGLWLYPLPFADDVRNVDLTMPP--------RPADELTDRMRQIVQNLQLPKA 493
Query: 437 GKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDS 476
+ P PNP+L+ Y L+ + +D P LDD+
Sbjct: 494 ----MYNPSKYPNPSLQWHYKVLQAMALDED-VPDSLDDA 528
>gi|112362681|emb|CAL35971.1| HDF2 protein [Saccharomyces kudriavzevii]
Length = 622
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 17/203 (8%)
Query: 240 KYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVK 299
+Y + +K A + +++ Y SV V+ + K YRYG V + S +
Sbjct: 281 EYEIHSEEKNKKANEDEEMESSYTSV-----VISKDSVTKAYRYGADYVVLPSVLVDQTV 335
Query: 300 FKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNSRATVAVSALARAMKEMNKVAI 357
++ + + GF D + R+Y + + IA+ G T+A AL M E KVA+
Sbjct: 336 YETFPGLDVRGFLDREALPRYYLTSESSFIIADTRLGCLSDTMAFGALVDVMLENRKVAV 395
Query: 358 VRCVWRQGQQSVVVGVLTPNVSEKINIPD------SFYFNVLPFAEDVREFQFPS-FSKF 410
R V ++ + V + L P + E ++ S LPFAED R FP ++
Sbjct: 396 ARYVSKKDSE-VNMCALCPILVEHADMDSETKVVRSLTLCRLPFAEDERVTDFPKLLNRT 454
Query: 411 PVSWQPNEQQ--QEAADNLVKML 431
S P EQ+ + D L++ L
Sbjct: 455 TTSGTPLEQETDEHEIDELMEQL 477
>gi|112362683|emb|CAL35970.1| HDF2 protein [Saccharomyces kudriavzevii]
gi|401841082|gb|EJT43623.1| YKU80-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 622
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 17/203 (8%)
Query: 240 KYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVK 299
+Y + +K A + +++ Y SV V+ + K YRYG V + S +
Sbjct: 281 EYEIHSEEKNKKANEDEEMESSYTSV-----VISKDSVTKAYRYGADYVVLPSVLVDQTV 335
Query: 300 FKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNSRATVAVSALARAMKEMNKVAI 357
++ + + GF D + R+Y + + IA+ G T+A AL M E KVA+
Sbjct: 336 YETFPGLDVRGFLDREALPRYYLTSESSFIIADTRLGCLSDTMAFGALVDVMLENRKVAV 395
Query: 358 VRCVWRQGQQSVVVGVLTPNVSEKINIPD------SFYFNVLPFAEDVREFQFPS-FSKF 410
R V ++ + V + L P + E ++ S LPFAED R FP ++
Sbjct: 396 ARYVSKKDSE-VNMCALCPILVEHADMDSETKVVRSLTLCRLPFAEDERVTDFPKLLNRT 454
Query: 411 PVSWQPNEQQ--QEAADNLVKML 431
S P EQ+ + D L++ L
Sbjct: 455 TTSGTPLEQETDEHEIDELMEQL 477
>gi|336370987|gb|EGN99327.1| hypothetical protein SERLA73DRAFT_168812 [Serpula lacrymans var.
lacrymans S7.3]
gi|336383742|gb|EGO24891.1| hypothetical protein SERLADRAFT_449625 [Serpula lacrymans var.
lacrymans S7.9]
Length = 647
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 105/527 (19%), Positives = 206/527 (39%), Gaps = 88/527 (16%)
Query: 5 REALLLLLDVSPSMHSVLPD----VEKLCSRLI---------QKKLIYGKNHEVGVILFG 51
R+ +LL +D S SM + D K C L +KK+I G N +G++LF
Sbjct: 28 RDVILLCIDCSESMQELRDDPVYENVKTCHLLTALEAAVQIQKKKVIVGPNDSIGILLFN 87
Query: 52 ------TEETENELTKEVGGYEHV------KVLQDIKVVDGH------LVQSL-----KH 88
T++ +E+ K ++ + K+ + I+++D L Q+ K
Sbjct: 88 TTRQSDTKDHTSEIKKNTFAFQPITQISAPKIQELIQLLDAARDDPDVLKQTFPPLTGKK 147
Query: 89 LPQGTCAGDYMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGL 148
+P G + G K + LITD P +P T + G+
Sbjct: 148 IPMGDVFTSCNWFLRDGAPKTASKRVFLITDEDNP--NPSSAQLLTSSRTTLLDLTQSGV 205
Query: 149 RMKNIVVRA---SLSGEPHMRVIIENDNLLNIFSKKSSA--KTLFVDSTTSLRGARKTRD 203
+++ + ++ +DN+ + S +S +++ + L + +
Sbjct: 206 QVEPFFISTPDKPFDANKFYSSVLLSDNVNDEDSDESGVLPESISITRIDDLLSQMRFHE 265
Query: 204 ISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYK 263
+ +F E+++ + I + Y E+K + + D + + V +D + +
Sbjct: 266 VPKRALFSIPFEMAKGLVIGIKGYGLVTEQKKGAYRYFVDLGDRMEVACSRTVYLDEDQQ 325
Query: 264 SVEDPSKVV----------PPEQRIKGYRYGPQVVPISSAEW----EAVKFKP---EKSV 306
+ D SK+V ++ +G ++VP + E F+ + +
Sbjct: 326 AEIDKSKIVFGMSLGVPVTDETSDVEDNGFGTRIVPAGKRPFFDADEVRSFRTLNLDPVI 385
Query: 307 KLLGFTDASNI-----LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCV 361
KLLGF D + ++H Y ++ E S + SAL + M K+ + +
Sbjct: 386 KLLGFKDKQELAFEDNVKHSYF----IYPDELKFSGSKRTFSALLKTMLAKGKIGLCIAL 441
Query: 362 WRQGQQSVVVGVLTPNVSEKI-----NIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQP 416
R+ +L +EKI N P F+ LPFA+D+R + ++
Sbjct: 442 TRRNASPTFCAMLPQ--AEKIEEGGWNEPPGFHVIPLPFADDIRA------APLEEGYRA 493
Query: 417 NEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKS 463
+++ ++AA + L + K P+ PNPAL YH+ +L++
Sbjct: 494 SDKIKDAARTWIDKLCV----KNGAYPPDSYPNPALA--YHNAQLQA 534
>gi|254580595|ref|XP_002496283.1| ZYRO0C14850p [Zygosaccharomyces rouxii]
gi|238939174|emb|CAR27350.1| ZYRO0C14850p [Zygosaccharomyces rouxii]
Length = 594
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 107/233 (45%), Gaps = 25/233 (10%)
Query: 279 KGYRYGPQVVPISSAEWEAVK--FKPEKS-VKLLGFTDASNILRHYYMKDVNLFIAEPGN 335
K + YG + I+ E V+ + E+S +K++GF D + + ++ D LF+ P
Sbjct: 328 KVFPYGDLDITITDEELNEVRKSYTEEESFLKIIGFRDYNKCIHYFNNIDRALFVV-PDE 386
Query: 336 SRATVAVSALARAMKEMNKVAIVRCVWRQGQQSV--VVGVLTPNVSEKINIPDSFYFNVL 393
R ++ LA K + V VW + + + V VL+P+ +E N + FY +
Sbjct: 387 FRFEGSIRTLASLFKNLRAKGKVAVVWGKLKTNSHPAVFVLSPSRNEDPN--EGFYLYRI 444
Query: 394 PFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALE 453
PFAE++R +FP S+ E Q D ++D KG +P NP L+
Sbjct: 445 PFAEELR--RFPQSLIRHNSYDTPEYNQ-LKDTTKSIIDHFQFAKG--YRPSEFRNPDLQ 499
Query: 454 RFY-----HHLELKSEHQDAAPPPL-------DDSLKKITEPDPTLLAESQSA 494
+ + + L+++ E +D +P DDSL K+ + ++ +QS+
Sbjct: 500 KHFKILHDYLLQVEQEEEDDSPESSKQRLLSEDDSLLKLAQIRDKIMDSAQSS 552
>gi|315041481|ref|XP_003170117.1| Ku70 protein [Arthroderma gypseum CBS 118893]
gi|311345151|gb|EFR04354.1| Ku70 protein [Arthroderma gypseum CBS 118893]
Length = 646
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 110/260 (42%), Gaps = 43/260 (16%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSR 337
K Y++G + + + E ++ E ++++GF S++ MK ++ +E G
Sbjct: 342 KAYKFGGEQISFTQEEQAELRNFGEPIIRIIGFKPLSSLPIWASMKHPTFIYPSEEGYVG 401
Query: 338 ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN------IPDSFYFN 391
+T SAL + + + NK+A+V V R+ V+ ++ EK++ IP +
Sbjct: 402 STRTFSALHQTLLKQNKMALVWFVPRRNAAPVMAAMIAGE--EKLDDNDIQIIPPGMWIL 459
Query: 392 VLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV-KMLDLA-----PSGKGEILQPE 445
LPFA+D+R+ P A D+LV KM + P G+ P
Sbjct: 460 PLPFADDIRQ-------------NPELNHISAPDSLVDKMRTIIQQLQLPKGQ---FDPH 503
Query: 446 LTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIK 505
PNP+L+ Y L+ + +D D ++ K AID G+ VI+
Sbjct: 504 RYPNPSLQWHYRILQALALDEDVPEQAEDKTIPKY------------KAIDKRAGELVIE 551
Query: 506 ENPKLKKSTRRFLREKPSGS 525
+L+ R + +P S
Sbjct: 552 WGEELESQYRALEKSQPVTS 571
>gi|452843591|gb|EME45526.1| hypothetical protein DOTSEDRAFT_170971 [Dothistroma septosporum
NZE10]
Length = 658
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 104/221 (47%), Gaps = 19/221 (8%)
Query: 266 EDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKD 325
ED ++ V + + Y++G + + + E ++ + ++++GF S +L + D
Sbjct: 342 EDTARTVEKVEIRRAYKFGGETISFTEEELAKIRNFGDTVLRIIGFKPIS-LLPMWASVD 400
Query: 326 VNLFI--AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN 383
+ FI +E G +T SAL + + + +K+ + + R+ +V V+ P V E+ +
Sbjct: 401 KSTFIYPSEDGWVGSTRVFSALHQKLLKDDKMGLAWYIPRKNSVPKLVAVI-PGVEERND 459
Query: 384 -----IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGK 438
+P + LP+A+D+RE S + P ++ +A +V+ L L +
Sbjct: 460 EGEQKMPPGLWLKPLPWADDIREAPETSLVRAP------DRVTDAMRIIVEQLQLPKA-- 511
Query: 439 GEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKK 479
+ P PNP+L+ FY L+ + +D P D +L K
Sbjct: 512 --VYDPYRYPNPSLQWFYRILQALALEEDLPEQPDDKTLPK 550
>gi|328353988|emb|CCA40385.1| Protein Ku70 [Komagataella pastoris CBS 7435]
Length = 608
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 66/138 (47%), Gaps = 12/138 (8%)
Query: 239 KKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAV 298
KK D+ D T ++++ YE V++ E +K YRYG ++P++S E +
Sbjct: 240 KKEDDREEKED---TDDIEIKYEEIPVDN-------ESLMKTYRYGTSLIPLTSTFNELL 289
Query: 299 KFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIV 358
K+ + + GF + ++M + L I +R VA +A+ +++ +++ V I+
Sbjct: 290 KYPTYSGIDIRGFVKKDRLPSFFFMGEPTLLIGGEA-TRDRVAFAAMCQSLLDVDSVGII 348
Query: 359 RCVWRQGQQSVVVGVLTP 376
R R V +G L P
Sbjct: 349 RYTLR-SSSGVFMGALIP 365
>gi|320582600|gb|EFW96817.1| Subunit of the telomeric Ku complex (Yku70p-Yku80p) [Ogataea
parapolymorpha DL-1]
Length = 656
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 94/230 (40%), Gaps = 39/230 (16%)
Query: 247 STDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSV 306
+TDK+ T +E S + + + + YRYG VP++S+ + + +
Sbjct: 277 TTDKYVT------FEPDSQSTEPRFLDATEVQEAYRYGSSTVPVTSSLKQLLNINTYAGL 330
Query: 307 KLLGFTDASNILRHYYMKDVNLFIAEPGNS-RATVAVSALARAMKEMNKVAIVRCVWRQG 365
+L F +I Y+ + + + +S R + LA+A+ E + VAIVR V R
Sbjct: 331 DILQFVRRKSIPPWYFHGEAEILLNNQNSSVRDQFGFNMLAQALLEHDLVAIVRYVKRNA 390
Query: 366 QQSVVVG-----VLTPNVSEKINI--------------PDSFYFNV--LPFAEDVREFQF 404
+ + VLT K + PD + F++ LPFAED R F
Sbjct: 391 GTARLAAMSPCIVLTDATKYKHELQTGDKRKLEEMDGEPDHYGFSLVALPFAEDERLSTF 450
Query: 405 PSFSKFPVSWQ---------PNEQQQEAADNLVKMLDLAPSGKGEILQPE 445
S S P+EQ + LV ++DL G G + +PE
Sbjct: 451 AKLSGVAESNGGDNLGSENFPSEQMLQEMGQLVDLMDL--DGPGSLKKPE 498
>gi|254574166|ref|XP_002494192.1| Subunit of the telomeric Ku complex (Yku70p-Yku80p), involved in
telomere length maintenance [Komagataella pastoris
GS115]
gi|238033991|emb|CAY72013.1| Subunit of the telomeric Ku complex (Yku70p-Yku80p), involved in
telomere length maintenance [Komagataella pastoris
GS115]
Length = 696
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 66/138 (47%), Gaps = 12/138 (8%)
Query: 239 KKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAV 298
KK D+ D T ++++ YE V++ E +K YRYG ++P++S E +
Sbjct: 328 KKEDDREEKED---TDDIEIKYEEIPVDN-------ESLMKTYRYGTSLIPLTSTFNELL 377
Query: 299 KFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIV 358
K+ + + GF + ++M + L I +R VA +A+ +++ +++ V I+
Sbjct: 378 KYPTYSGIDIRGFVKKDRLPSFFFMGEPTLLIGGEA-TRDRVAFAAMCQSLLDVDSVGII 436
Query: 359 RCVWRQGQQSVVVGVLTP 376
R R V +G L P
Sbjct: 437 RYTLR-SSSGVFMGALIP 453
>gi|367045694|ref|XP_003653227.1| hypothetical protein THITE_2115421 [Thielavia terrestris NRRL 8126]
gi|347000489|gb|AEO66891.1| hypothetical protein THITE_2115421 [Thielavia terrestris NRRL 8126]
Length = 645
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 108/227 (47%), Gaps = 24/227 (10%)
Query: 256 VKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDAS 315
+KVD + ++V D S+V K Y++G + + E ++K K ++++GF S
Sbjct: 320 IKVDSDTRTV-DKSEVK------KAYKFGGEYIYFKPEELASLKNLGGKVLRVIGFKPRS 372
Query: 316 NILRHYYM-KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL 374
+I + K + +F +E +T SAL + + + +KV + V RQ ++V ++
Sbjct: 373 SIPTWASVKKSIFIFPSEEDYVGSTRVFSALWQKLLDADKVGLAWFVARQNANPIMVAII 432
Query: 375 -TPNVSEKIN----IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVK 429
+ N E+ + +P + LPFA+DVR + + + P ++ + +V+
Sbjct: 433 PSRNPDEETSGTPYLPAGLWLYPLPFADDVRNVELSAPPR------PADELTDKMREIVQ 486
Query: 430 MLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDS 476
L L + + P PNP+L+ Y L+ + +D P LDD+
Sbjct: 487 NLQLPKA----MYNPLKYPNPSLQWHYKILQAMALEED-VPEGLDDA 528
>gi|242817832|ref|XP_002487024.1| DSB repair complex subunit Ku70, putative [Talaromyces stipitatus
ATCC 10500]
gi|218713489|gb|EED12913.1| DSB repair complex subunit Ku70, putative [Talaromyces stipitatus
ATCC 10500]
Length = 661
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 118/575 (20%), Positives = 224/575 (38%), Gaps = 87/575 (15%)
Query: 5 REALLLLLDVSPSMHSVLPDVE-------------KLCSRLIQKKLIYGKNHEVGVILFG 51
++A+L +D+S SM P K L+Q+++I +GV+ +G
Sbjct: 36 KDAILFAIDISDSMLMDRPSESNKGQPQSPAKAAIKCAYHLMQQRIISNPKDMMGVLFYG 95
Query: 52 TEETE--NELTKEVGG--YEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDYMLIKKYGET 107
TE + +E GG Y H + D++V D + V+SL+ L + + +L+
Sbjct: 96 TEASRFYDEDENSCGGLSYPHCYLFTDLEVPDANDVKSLRALAEDDDEAEQILVSSKERV 155
Query: 108 YKGKKHLC-----------LITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVR 156
C ++ L + D D +D+ A + A L +++
Sbjct: 156 SMANVLFCANQIFTSKASNFLSRRLFIITDSDNPHADDRTMRSAATVRAKDLYDLGVIIE 215
Query: 157 ASLSGEPHMRVIIEN--DNLLNIFSKKSSAKTLFVDSTTSLRGA--------------RK 200
P D+++ + + F + T + A
Sbjct: 216 LFPISRPDHEFDRSKFYDDIIYKTAPGDPEASAFTAAGTQVPNASGDGISLLNSLLSSVN 275
Query: 201 TRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKY---SDKAPSTDKFATHEVK 257
+R + +F+ LE S KI V Y ++ P+ Y + P K T V
Sbjct: 276 SRSVPRRALFKIPLEFSPDFKISVTGYLIFKRQE-PSRSCYVWLGGEKPELAKGTTTHV- 333
Query: 258 VDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI 317
+D ++ V + K Y++G + + ++ E ++ + ++++GF S++
Sbjct: 334 -------ADDTARTVEKGEIRKAYKFGGEQISFTAEEQAKLRNFGDPVIRIIGFKPRSSL 386
Query: 318 LRHYYMKDVN-LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTP 376
+K ++ +E +T SAL + + + K+ IV + R+ V+ +L
Sbjct: 387 PIWASIKHPTFIYPSEDEFVGSTRVFSALHQKLLKDEKIGIVWFIARKNATPVLAAMLAG 446
Query: 377 NVSEKIN------IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKM 430
EK++ +P + LPFA+D+R Q P + V+ +P +V+
Sbjct: 447 E--EKLDDNGVQFLPPGLWILPLPFADDIR--QNPE-TNLVVAPEPLIDHMR---TIVQQ 498
Query: 431 LDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAE 490
L L P + P PNPAL+ Y L+ + LD+ L + E D T+
Sbjct: 499 LQL-PKAQ---YDPRKYPNPALQWHYRILQALA---------LDEELPEQAE-DKTIPRY 544
Query: 491 SQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGS 525
Q ID G +V++ +L+K ++ +P S
Sbjct: 545 KQ--IDKRAGDYVLEWGEELEKQHQKMYTGQPKTS 577
>gi|356576925|ref|XP_003556580.1| PREDICTED: ATP-dependent DNA helicase 2 subunit KU70-like [Glycine
max]
Length = 633
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 104/233 (44%), Gaps = 14/233 (6%)
Query: 249 DKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKL 308
D H +K++ + V+ + V P +R Y+ Q + S + +K + L
Sbjct: 305 DSVTNHPLKIERTFICVDTGALVEEPTKRFLPYK--NQNIIFSMKQLSEIKRVSTGHLHL 362
Query: 309 LGFTDASNILRHYYMK-DVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQ 367
LGF S + +Y +K L+ ++ G + AL R+M ++N+ A+ Q
Sbjct: 363 LGFKPLSCLRDYYNLKPSTFLYPSDEGTDSSMCMFIALHRSMIQLNRFAVAFSGSSSRPQ 422
Query: 368 SVVVGVLTPNVSEKINI-PDSFYFNVLPFAEDVR--EFQFPSFSKFPVSWQPNEQQQEAA 424
V + + I P + LP+++D+R E ++ S V+ ++Q ++AA
Sbjct: 423 LVALIAQEEVIQSGGQIEPPGMHMIYLPYSDDIRFVEERYSDTSGM-VNIASDDQIKKAA 481
Query: 425 DNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSL 477
NL+K +DL +I NPAL+R Y L+ + +D P D+SL
Sbjct: 482 -NLIKRIDLKDFSVCQI------SNPALQRHYAVLQALALEEDDIPEMKDESL 527
>gi|365989646|ref|XP_003671653.1| hypothetical protein NDAI_0H02360 [Naumovozyma dairenensis CBS 421]
gi|343770426|emb|CCD26410.1| hypothetical protein NDAI_0H02360 [Naumovozyma dairenensis CBS 421]
Length = 640
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 71/151 (47%), Gaps = 9/151 (5%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFI---AEPGN 335
K YRYG V + + E + ++ S+ + GF D ++ R Y + ++FI G+
Sbjct: 330 KAYRYGADYVVLPPSLQEQLTYETWPSLDIRGFLDKDSLPR-YLLTSESIFIMPDTRLGS 388
Query: 336 SRATVAVSALARAMKEMNKVAIVRCV---WRQGQQSVVVGVLTPNVSEKINIPDSFYFNV 392
V + L + +KVAI R V + + Q V+V +L + K I +F N
Sbjct: 389 QADNVTFNVLVDVLLGQDKVAIARYVPKYYSEVQMCVLVPLLVLHEDGKTLI-RAFVLNR 447
Query: 393 LPFAEDVREFQFPSFSKF-PVSWQPNEQQQE 422
LPFAED R FP +K S QP ++ E
Sbjct: 448 LPFAEDERVADFPRLTKRKTTSGQPIPEKDE 478
>gi|112362685|emb|CAL35969.1| HDF2 protein [Saccharomyces kudriavzevii]
Length = 622
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 62/146 (42%), Gaps = 7/146 (4%)
Query: 269 SKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNL 328
S V+ + K YRYG V + S + ++ + + GF D + R+Y + +
Sbjct: 305 SVVISKDSVTKAYRYGADYVVLPSVLVDQTVYETFPGLDVRGFLDREALPRYYLTSESSF 364
Query: 329 FIAEP--GNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVG-----VLTPNVSEK 381
IA+ G T+A AL M E KVA+ R V ++ + + V P + +
Sbjct: 365 IIADTRLGCLSDTMAFGALVDVMLENRKVAVARYVSKKDSEVNMCALCPILVEHPGMDSE 424
Query: 382 INIPDSFYFNVLPFAEDVREFQFPSF 407
+ S LPFAED R FP
Sbjct: 425 TKVVRSLTLCRLPFAEDERVTDFPKL 450
>gi|392564799|gb|EIW57977.1| ku70-like protein [Trametes versicolor FP-101664 SS1]
Length = 663
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 121/548 (22%), Positives = 204/548 (37%), Gaps = 94/548 (17%)
Query: 5 REALLLLLDVSPSMHSVLPDVE----KLCSRLI---------QKKLIYGKNHEVGVILFG 51
R+ +L +D SPSM + D + C+ ++ +KK++ G N VG++LF
Sbjct: 27 RDVILFCIDCSPSMLEMRDDERYEDVQTCNLMVALEAAMQIQKKKVLVGPNDAVGIVLFN 86
Query: 52 TEETENELTKEVGGYEHVKVLQDIKVVDG----HLVQSL-----------KHLPQGT--- 93
T + + + V Q + +D LVQ L K P T
Sbjct: 87 TTKRNDNADDSTDVKKGTYVYQPLATIDAPKVMELVQLLDEAREKPDFLRKTFPPMTDKR 146
Query: 94 -CAGDYM----LIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGL 148
GD + + + G K + ITD DP G + T AR + L
Sbjct: 147 IAVGDVLTSCNWVMRDGAPKTATKRIFFITDE----DDPHPGPSGHRFITSARTTL-IDL 201
Query: 149 RMKNIVVRASLSG------EP---HMRVIIEND--NLLNIFSKKSSA---KTLFVDSTTS 194
+ V G +P + V++ + +L +I + +++ +
Sbjct: 202 MQTGVTVEPFFIGTEDKPFDPAKFYSSVLLPTNLTDLDDISDGDPGSILPESISITRVEE 261
Query: 195 LRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATH 254
L + ++ +F L L+ I V Y E+K + ++D + +
Sbjct: 262 LLAQMRFHEVPKRALFSVPLTLAPGFMIGVKGYGLITEQKKGAYRYFADLGDRMEPVTSR 321
Query: 255 EVKVDYEYKSVED------------PSKVVPPE--QRIKGYRYGPQVVPISSAEW----E 296
VD + + D PS V E Q K G + V + S + E
Sbjct: 322 AAYVDEDRDAEADKAEILYGMDLGAPSAEVDGEEGQDAKTSDVGTRAVQLGSRVFYTADE 381
Query: 297 AVKFKP---EKSVKLLGFTDASNILRHYYMK-DVNLFIAEPGNSRATVAVSALARAMKEM 352
F+ E +KLLGF D S + +K V ++ E S + +AL R M +
Sbjct: 382 VRSFRTLGLEPGIKLLGFKDRSELAFEDNVKHSVFVYPDEMTYSGSKRTFTALLRTMIKK 441
Query: 353 NKVAIVRCVWRQGQQSVVVGVLTPNVSEKINI-----PDSFYFNVLPFAEDVREFQFPSF 407
K+AIV + R+ V VL +EK++ P F+ LPFA+D+R
Sbjct: 442 EKIAIVLALMRRNASPVFCAVLPQ--AEKVDESGWREPPGFHLIPLPFADDIRA------ 493
Query: 408 SKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQD 467
+ ++ + + AA ++ L + K P+ PNPAL LE + +D
Sbjct: 494 ASQQKGFRASTELVAAARKWIEKLKV----KNGSYPPDSYPNPALAYHNTQLEASAFRED 549
Query: 468 AAPPPLDD 475
P +D
Sbjct: 550 FDPDAFED 557
>gi|195115270|ref|XP_002002187.1| GI17244 [Drosophila mojavensis]
gi|193912762|gb|EDW11629.1| GI17244 [Drosophila mojavensis]
Length = 700
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 92/424 (21%), Positives = 173/424 (40%), Gaps = 57/424 (13%)
Query: 258 VDYEYKSVEDPSKVVP-PEQRIKGYRYGPQVVPISSAEWEAVKFKPEKS--VKLLGFTDA 314
V+ E + V ++V P PE I GY G VP V+ P + + +GF
Sbjct: 266 VEREERFVIKGTEVTPLPEDLIDGYMLGGTPVPYDET---LVELPPAHAPGLHFVGFVKH 322
Query: 315 SNILRHYYMKD-VNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGV 373
S+I Y+ D + + + + GN+ + + AL RA+ V + ++ + + V
Sbjct: 323 SSIPDAYFCGDSLYMLVHQKGNTSSAQKLDALVRALIAQKCVILCWKIFSVKFNTPRIVV 382
Query: 374 LTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDL 433
L P S K + P + Y L + + + FPS + N+ Q +A DNL+ +DL
Sbjct: 383 LIPQES-KDDSPATLYMQELSYHAQHQFWDFPSLRTEKT--ECNKDQLKAVDNLIDSMDL 439
Query: 434 APSGKGEILQP------ELTPNPALERFYHH-----LELKSEHQDAAPPPLDDSLKK--- 479
+ K + QP +L P L + LE K + D+ LK+
Sbjct: 440 ECTLK-DTQQPRQRRKNDLLPFDGLPSIFEQNVMDVLEYKVISKKKDEELFDEMLKQKNF 498
Query: 480 ----ITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVS 535
P+P + +S+ A A F ++ + +L + + E N ++
Sbjct: 499 VDVFWRVPEP-IEEKSKQAAAALKKLFPLEH-------SYAWLEKLKAKEQEQNPAPAI- 549
Query: 536 DAQAVNSMESKPVVTVDKIGDLTPIQDFEAMM---------SRRDCPDWVDKAIEDMKNK 586
ES+ +T++ +G +TP+QD++ ++ ++RD M+
Sbjct: 550 ------KQESEDTITINSVGLMTPVQDYKQLLQKVRSELNTTKRDAQ--FQSLAAQMRVV 601
Query: 587 IFGLLENSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFL 646
I LLE + +N + E++ R C+ ++N ++ +RN F+ +
Sbjct: 602 INTLLERNKLDLN--QLNEVIKLYRDSCLEFNSFAEYNQFANQLKTKASERNLQEFWHSI 659
Query: 647 MSKK 650
+ +K
Sbjct: 660 VVEK 663
>gi|302677669|ref|XP_003028517.1| ku70-like protein [Schizophyllum commune H4-8]
gi|300102206|gb|EFI93614.1| ku70-like protein [Schizophyllum commune H4-8]
Length = 661
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 92/214 (42%), Gaps = 40/214 (18%)
Query: 289 PISSAEWEAVKFKP---EKSVKLLGFTDASNI-----LRHYYMKDVNLFIAEPGNSRATV 340
P +AE E KF+ E +KLLGF DA + ++H + ++ E S +
Sbjct: 377 PFYTAE-EVKKFRTLGLEPGIKLLGFKDADTLAFEDNIKHSHF----IYPDELAYSGSKR 431
Query: 341 AVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINI----PDSFYFNVLPFA 396
SAL R++ + NK+ +VR + R+ + P + + + P F+ LPFA
Sbjct: 432 TFSALLRSLVKKNKIGLVRVLTRRNATPTFCA-MVPQMEQTDDAGWTEPAGFHLIPLPFA 490
Query: 397 EDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFY 456
+D+R+ + ++ EAA + + + G P+ PNPAL Y
Sbjct: 491 DDIRQ------ATVEKGYRAGRPLMEAAMPFIHKITIKKGG----YPPDSYPNPALA--Y 538
Query: 457 HHLELK----------SEHQDAAPPPLDDSLKKI 480
H+ +L+ SE +D P D KKI
Sbjct: 539 HNEQLQASAFREEYDPSEFEDQTLPAYDSMHKKI 572
>gi|195438100|ref|XP_002066975.1| GK24271 [Drosophila willistoni]
gi|194163060|gb|EDW77961.1| GK24271 [Drosophila willistoni]
Length = 690
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 73/167 (43%), Gaps = 6/167 (3%)
Query: 269 SKVVP-PEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKD-V 326
S++ P PE I GY G VP E + P + +GF + +I Y+ D +
Sbjct: 269 SEITPLPEDLIDGYMLGGTAVPYDDTLIEPKEPHP-AGLHFVGFVEWESIPDEYFCGDSL 327
Query: 327 NLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD 386
+ + + GNS + + AL RA+ +V + ++ + V VL P E+ N P
Sbjct: 328 YMLVHQKGNSVSARKLDALVRALILKKRVILCWKIFSLKFNTPRVVVLIPQQPEE-NKPA 386
Query: 387 SFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDL 433
S Y L + + FPS + N Q EA DNL+ +DL
Sbjct: 387 SLYMLELSYHAQHHFWDFPSLRTAKT--ESNSDQLEAIDNLIDSMDL 431
>gi|444317158|ref|XP_004179236.1| hypothetical protein TBLA_0B09020 [Tetrapisispora blattae CBS 6284]
gi|387512276|emb|CCH59717.1| hypothetical protein TBLA_0B09020 [Tetrapisispora blattae CBS 6284]
Length = 681
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 84/192 (43%), Gaps = 31/192 (16%)
Query: 261 EYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRH 320
+YK+V SK + K YRYG V + + + + F + + GF D ++ RH
Sbjct: 336 DYKTVTVSSKSIS-----KVYRYGTDYVVLPTTLTDNLSFNTYPGLDITGFMDEESLPRH 390
Query: 321 YYMKDVNLFIAE--PGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNV 378
Y + + +A+ G++ ++ L + E K+AI R V + + +V +L P +
Sbjct: 391 YLISESTFIVADSRAGSTADMMSFEILVDVLYENKKIAIARYVQKNNTNAQMV-MLCPVL 449
Query: 379 ----------------------SEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQP 416
+E++N+ + LPFAED R +FP S + +
Sbjct: 450 VDHSDILSEQDIQKYRSIHDDDNEEVNMR-GLILSRLPFAEDERVSEFPKLSNRHMKNEK 508
Query: 417 NEQQQEAADNLV 428
++ + E D+L+
Sbjct: 509 SKLEAEEIDSLM 520
>gi|112362687|emb|CAL35968.1| HDF2 protein [Saccharomyces mikatae]
Length = 600
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 60/137 (43%), Gaps = 9/137 (6%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 336
K YRYG + + S + ++ + L GF D + R+Y + + IA+ G
Sbjct: 304 KAYRYGTDYIVLPSVLVDQTVYETFPGLDLRGFLDKEALPRYYLTSESSFIIADTRLGCL 363
Query: 337 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD------SFYF 390
++A AL M E K+A+ R V ++ + V + L P + E NI S
Sbjct: 364 SDSMAFGALVDVMLENRKIAVARYVSKKDSE-VNMCALCPVLIEHSNINSEKKVVKSLTL 422
Query: 391 NVLPFAEDVREFQFPSF 407
LPFAED R FP
Sbjct: 423 CRLPFAEDERVTDFPKL 439
>gi|112362691|emb|CAL35966.1| HDF2 protein [Saccharomyces mikatae]
Length = 595
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 60/137 (43%), Gaps = 9/137 (6%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 336
K YRYG + + S + ++ + L GF D + R+Y + + IA+ G
Sbjct: 314 KAYRYGTDYIVLPSVLVDQTVYETFPGLDLRGFLDKEALPRYYLTSESSFIIADTRLGCL 373
Query: 337 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD------SFYF 390
++A AL M E K+A+ R V ++ + V + L P + E NI S
Sbjct: 374 SDSMAFGALVDVMLENRKIAVARYVSKKDSE-VNMCALCPVLIEHSNINSEKKVVKSLTL 432
Query: 391 NVLPFAEDVREFQFPSF 407
LPFAED R FP
Sbjct: 433 CRLPFAEDERVTDFPKL 449
>gi|268574284|ref|XP_002642119.1| C. briggsae CBR-CKU-80 protein [Caenorhabditis briggsae]
Length = 717
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 99/217 (45%), Gaps = 23/217 (10%)
Query: 269 SKVVPPEQRIK---GYRYGPQVVPISS----AEWEAVKFKPEKS---VKLLGFTDASNIL 318
+K + P ++IK GY +G V+ + ++ F ++ +KL+ FT +NIL
Sbjct: 291 AKNLKPVEKIKTKHGYNFGKSVIMMDQDYLKEKYNDHNFNEGQTGGVLKLIQFTKRANIL 350
Query: 319 RHYYMKDVNLFIAEPGNS---RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLT 375
Y M+ + NS AT A AL RAM +M I R + Q +V +L
Sbjct: 351 DSYLMEASAKTVLPSLNSPKSGATKAAVALIRAMFDMRVAGICRYTFHATSQVQLVALL- 409
Query: 376 PNVSEKINIPDSFYFNV--LPFAEDVREFQFPSFS---KFPVSWQPNEQQQEAADNLVKM 430
P+ + + +Y LPF++D+R +FP F+ + +P Q A D+L+
Sbjct: 410 PHRDAETGV---YYLRSVKLPFSDDMRTLKFPKFTFDEDEEDTNKPTVAQLSAVDDLIDK 466
Query: 431 LDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQD 467
+ L S +++ ++ +P L+ H ++ H D
Sbjct: 467 MQLPESEISSLIEGGMS-DPKLQMQCHFIKSLVLHPD 502
>gi|358063676|ref|ZP_09150282.1| Ku protein [Clostridium hathewayi WAL-18680]
gi|356698111|gb|EHI59665.1| Ku protein [Clostridium hathewayi WAL-18680]
Length = 271
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 100/213 (46%), Gaps = 28/213 (13%)
Query: 262 YKSV-EDPSKVVPPEQRIKGYRYGP-QVVPISSAEWEAVKFKPEKSVKLLGFTDASNILR 319
YK V + K V + +KG+ + P + V ++ A++E K + +K++++L FTD +NI
Sbjct: 44 YKKVCANCGKEVGSQDIVKGFEFAPGEYVTMTDADFEKAKTEKDKTIQILHFTDIANIRP 103
Query: 320 HYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVS 379
Y+ K + + G+ A L RAM E KVAI + V Q ++ + L P +
Sbjct: 104 IYFDKTYHAVVEAGGDK----AYELLRRAMLEEKKVAIAKTVMGQSEKLL---CLVP--T 154
Query: 380 EKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKG 439
EK + ++ + FA++V+E K V + N+ + + A L+ +D
Sbjct: 155 EKGILVETLF-----FADEVKE-----IPKEAVHQELNQPELDMAKMLIGSMD------- 197
Query: 440 EILQPELTPNPALERFYHHLELKSEHQDAAPPP 472
+ +P L + +R +E K QD P
Sbjct: 198 KPFEPSLYHDEYQKRLREIIEAKINGQDIVQAP 230
>gi|112362689|emb|CAL35967.1| HDF2 protein [Saccharomyces mikatae]
Length = 598
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 60/137 (43%), Gaps = 9/137 (6%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 336
K YRYG + + S + ++ + L GF D + R+Y + + IA+ G
Sbjct: 314 KAYRYGTDYIVLPSVLVDQTVYETFPGLDLRGFLDKEALPRYYLTSESSFIIADTRLGCL 373
Query: 337 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD------SFYF 390
++A AL M E K+A+ R V ++ + V + L P + E NI S
Sbjct: 374 SDSMAFGALVDVMLENRKIAVARYVSKKDSE-VNMCALCPVLIEHSNINSEKKVVKSLTL 432
Query: 391 NVLPFAEDVREFQFPSF 407
LPFAED R FP
Sbjct: 433 CRLPFAEDERVTDFPKL 449
>gi|50291883|ref|XP_448374.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527686|emb|CAG61335.1| unnamed protein product [Candida glabrata]
Length = 615
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 71/144 (49%), Gaps = 4/144 (2%)
Query: 268 PSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN 327
P V E K YRYG V + S+ + + ++ + + GF + S++ RH ++ +
Sbjct: 310 PPITVARESITKAYRYGTDYVVLPSSLEDQLVYQTYAGLDIRGFMNMSDMHRH-FLTSES 368
Query: 328 LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD- 386
+F+ +S + SAL AM +++K+AI R V + V + +L P + EK N
Sbjct: 369 VFVVSSSSSADQITFSALIDAMIQIDKIAIGRYVPK-NNSDVQMCMLYPMILEKENGTHV 427
Query: 387 -SFYFNVLPFAEDVREFQFPSFSK 409
+ N LPF ED R FP ++
Sbjct: 428 RTLILNRLPFTEDERIAIFPRLTR 451
>gi|112362693|emb|CAL35965.1| HDF2 protein [Saccharomyces mikatae]
Length = 570
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 60/137 (43%), Gaps = 9/137 (6%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 336
K YRYG + + S + ++ + L GF D + R+Y + + IA+ G
Sbjct: 291 KAYRYGTDYIVLPSVLVDQTVYETFPGLDLRGFLDKEALPRYYLTSESSFIIADTRLGCL 350
Query: 337 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD------SFYF 390
++A AL M E K+A+ R V ++ + V + L P + E NI S
Sbjct: 351 SDSMAFGALVDVMLENRKIAVARYVSKKDSE-VNMCALCPVLIEHSNINSEKKVVKSLTL 409
Query: 391 NVLPFAEDVREFQFPSF 407
LPFAED R FP
Sbjct: 410 CRLPFAEDERVTDFPKL 426
>gi|193645803|ref|XP_001952755.1| PREDICTED: x-ray repair cross-complementing protein 5-like
[Acyrthosiphon pisum]
Length = 544
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 92/434 (21%), Positives = 173/434 (39%), Gaps = 71/434 (16%)
Query: 5 REALLLLLDVSPSMHSVLPDVE------KLCSRLIQKKLIYGKNHEVGVILFGTEETENE 58
++ ++ L+D S MH+ D LC +++ K + +N ++G++++GT + +
Sbjct: 26 KQHIIFLIDASKPMHNTYNDTTFFATCIALCKKIVLKLIRESRNDKIGILIYGTNDANKK 85
Query: 59 LTKEVG--------GYEHVKVLQDIKVVDGHLVQS----LKHLPQGTCAGDYMLIKKYGE 106
K + + +K L D V+ G L+Q+ L L +Y LIKK E
Sbjct: 86 CPKYINVLSEPIKPNIQLIKKLDD--VLTGKLIQTGQCPLSPLSDAVWYSNY-LIKKCSE 142
Query: 107 TYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIAR--QMVAFGLRMKNIVVRASLSGEPH 164
+ + D PD+G + Q R ++ + K I + A+ +
Sbjct: 143 NQSCSTIMLITCD-----DQPDIGDSKKQFHLRTRIDDVIKNNIDFKLIPIGATFNMNLF 197
Query: 165 MRVIIENDNLLNI-FSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIK 223
+++N N ++ + S + +D L+ R +S + F ++ I
Sbjct: 198 YEGLLKNFNSISKPINGLESIDDIMLDINDKLKHG---RSVSKIKFF-----INNDFYIS 249
Query: 224 VWVYKKTGEEKFPT---LKKYSDK--APSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRI 278
+YK + K P+ L K ++K +T F H ++ Y+ +
Sbjct: 250 TALYKFYTKLKMPSKVKLDKRTNKPLTSNTQVFTLHTNELMYK-------------SDQA 296
Query: 279 KGYRYGPQVVPISSAEWEAVK---FKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGN 335
K + + + E +K KP ++LLGF NI+ Y+ K ++F+ P N
Sbjct: 297 KYLELANEKIIFKNEEMTILKNGIIKP--GIRLLGFISKKNIMIFYHFK-TSIFL-RPNN 352
Query: 336 ---SRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTP-----NVSEKINIPDS 387
+T + L E NK R+G + +V +L P N + N P
Sbjct: 353 EVVESSTHMFNTLLECCLEKNKCIKCSLKIRKGGKVNLV-ILIPQAEIMNETGTQNHPSG 411
Query: 388 FYFNVLPFAEDVRE 401
F+ LPF+ V++
Sbjct: 412 FHVIFLPFSGCVKK 425
>gi|443723956|gb|ELU12174.1| hypothetical protein CAPTEDRAFT_158558 [Capitella teleta]
Length = 553
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 126/284 (44%), Gaps = 35/284 (12%)
Query: 200 KTRDISPVTI-FRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKV 258
K R +S V+ F G LE M + V+ +T K P +K Y K EVK
Sbjct: 202 KKRTLSRVSFSFGGALE----MAVGVYNLVRTCT-KPPAVKLY--------KKTNEEVKT 248
Query: 259 DYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNIL 318
+ + D ++V+ P+ K Y + + E +K + VKLLGF S++
Sbjct: 249 VTQ-TFLRDTAEVLMPQDMKKMQTYATKQICFEPEEITQIKKFDDPGVKLLGFKPKSSLK 307
Query: 319 RHYYMKDVN-LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPN 377
+ ++++ L+ E +T +AL + + + VAI R RQ Q +V L P
Sbjct: 308 KMHHVRPAQFLYPDETQIKGSTTLFTALLKKCLQRDVVAICRFTARQNQPPRIVA-LVPQ 366
Query: 378 VSE----KINI-PDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD 432
E ++ + P F+ +P+A+D R +F P + + +Q + A ++VK L
Sbjct: 367 EEELDEHQVQVAPPGFHVIFMPYADDFRNLKFE--EGVP---RASTEQIDKAKSIVKKLR 421
Query: 433 LAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDS 476
PE NP+L++ Y ++E + +D P ++DS
Sbjct: 422 FT-------FSPEGMENPSLQQHYVNVEAMALDRD-QPDDINDS 457
>gi|330805479|ref|XP_003290709.1| hypothetical protein DICPUDRAFT_7342 [Dictyostelium purpureum]
gi|325079131|gb|EGC32746.1| hypothetical protein DICPUDRAFT_7342 [Dictyostelium purpureum]
Length = 528
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 94/449 (20%), Positives = 180/449 (40%), Gaps = 73/449 (16%)
Query: 5 REALLLLLDVSPSMHSV-------LPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETEN 57
R+ ++ L+D S SM + K + I K+I ++ +GV + T++ +N
Sbjct: 4 RDCIVFLIDASKSMFDQNDSGEVPFYNAIKCLIQTITDKIITSESDLIGVCFYNTDKKKN 63
Query: 58 ELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQG--------------------TCAGD 97
+ +E++ VL ++ + D ++ L+ + + TC+
Sbjct: 64 -----INDFENIYVLSELDIPDPKIILQLEDILENDFSKSFGHFNGDFPLCDALWTCSTM 118
Query: 98 YMLIKKYGETYKGK---KHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIV 154
+ +K+ + + K + L T+ +P+ + ++ TI R L ++ +
Sbjct: 119 FSNMKQTSAQSQQQNNFKRIFLFTNQ----DNPNQYNEGNRNLTIQRAKDLSELNIQIEL 174
Query: 155 VRASLSGEP------HMRVIIENDNLLNIFSKKSSAKTLFVDSTTSL-RGARKTRDISPV 207
+ GE + +++ D+ I + +A T F + + L R K R + +
Sbjct: 175 FSMNKPGEQFDFTLFYQNILVFGDDDQYIDPNQFNASTKFSELLSKLKRKEFKKRSLGKI 234
Query: 208 TIFRG---DLELSEKMKIKVWVYK--KTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEY 262
++ G D + ++ I +Y T + P L P T+ VK
Sbjct: 235 PLYIGSSSDNNNNNQIVISTQMYNLFSTARKSSPVLLD-----PKTNLPVKQLVK----- 284
Query: 263 KSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYY 322
E + P Q + + YG + V S E +++K + LLGF S I ++
Sbjct: 285 NVCEATGATLLPSQIKQSFYYGGEPVIFSKDELDSIKSIDRIGLTLLGFKPTSAIKAYHS 344
Query: 323 MKDVN-LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEK 381
+K + +F E +TV ++L M + +KVAI R R G +V +L P
Sbjct: 345 IKHSSFIFPDEQMIKGSTVTFNSLVEQMLKSDKVAICRFTSRSGSAPRMVALL-PQEEIL 403
Query: 382 INIPDSF----------YFNVLPFAEDVR 400
IN DSF + LP+A+D+R
Sbjct: 404 INEFDSFGKIQFRPRGMHIIYLPYADDIR 432
>gi|325091560|gb|EGC44870.1| Ku70 protein [Ajellomyces capsulatus H88]
Length = 655
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 109/256 (42%), Gaps = 35/256 (13%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSR 337
K Y++G + + + E +++ E +++++GF S + MK ++ E G
Sbjct: 343 KAYKFGGEQISFTQEEQASLRNFGEPTIRIIGFKPLSALPIWASMKHPTFIYPTEEGYVG 402
Query: 338 ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL--TPNVSEKIN--IPDSFYFNVL 393
+T SAL + + + K+A+V V R+ V+ ++ P + E IP + L
Sbjct: 403 STRVFSALYQTLLKKEKLALVWFVPRKNAAPVMAAMIPGRPKLGEDGEEVIPQGMWILPL 462
Query: 394 PFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV----KMLDLAPSGKGEILQPELTPN 449
PFA+D+R+ P A D+LV ++ L K + P+ PN
Sbjct: 463 PFADDIRQ-------------NPETNLITAPDSLVDKMRTVIQLLQLPKAQ-YDPQKYPN 508
Query: 450 PALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPK 509
P+L+ Y L+ + +D P D ++ K + ID G+FVI +
Sbjct: 509 PSLQWHYRILQALALDEDLPEQPEDKTVPKYRQ------------IDNRAGEFVIAWGKE 556
Query: 510 LKKSTRRFLREKPSGS 525
L+ ++P+ S
Sbjct: 557 LESQHLMIEAKQPATS 572
>gi|390362977|ref|XP_003730269.1| PREDICTED: X-ray repair cross-complementing protein 5-like, partial
[Strongylocentrotus purpuratus]
Length = 325
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 98/229 (42%), Gaps = 25/229 (10%)
Query: 266 EDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKD 325
ED +++ P K YG + + E + VK + + L+GF S + +++++K
Sbjct: 32 EDTGELLMPSDIKKYQTYGGKNIIFEKDEVDEVKKFYDPGLTLMGFKPRSALKKYFHVKP 91
Query: 326 VN-LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSE---- 380
LF E S + +AL + +KVAI R + R+ V +L P E
Sbjct: 92 AQFLFPDETSVSGSNTLFNALLQRCSARDKVAICRYIPRKNSPPKFVALL-PQKEELDEH 150
Query: 381 KINI-PDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKG 439
+ I P F+ LPF++D+R+ + P+ + Q + A N+VK L S
Sbjct: 151 SVQITPPGFHLIFLPFSDDMRKLEHPTHPR------ATPDQIDKAKNVVKKLQFQFSS-- 202
Query: 440 EILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLL 488
E NP L+ Y LE + +D D + TEP+ ++
Sbjct: 203 -----ENFENPVLQTHYRTLEALALDRDTT-----DDMVDHTEPNKEMI 241
>gi|225562114|gb|EEH10394.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 655
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 109/256 (42%), Gaps = 35/256 (13%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSR 337
K Y++G + + + E +++ E +++++GF S + MK ++ E G
Sbjct: 343 KAYKFGGEQISFTQEEQASLRNFGEPTIRIIGFKPLSALPIWASMKHPTFIYPTEEGYVG 402
Query: 338 ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL--TPNVSEKIN--IPDSFYFNVL 393
+T SAL + + + K+A+V V R+ V+ ++ P + E IP + L
Sbjct: 403 STRVFSALYQTLLKKEKLALVWFVPRKNAAPVMAAMIPGRPKLGEDGEEVIPQGMWILPL 462
Query: 394 PFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV----KMLDLAPSGKGEILQPELTPN 449
PFA+D+R+ P A D+LV ++ L K + P+ PN
Sbjct: 463 PFADDIRQ-------------NPETNLITAPDSLVDKMRTVIQLLQLPKAQ-YDPQKYPN 508
Query: 450 PALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPK 509
P+L+ Y L+ + +D P D ++ K + ID G+FVI +
Sbjct: 509 PSLQWHYRILQALALDEDLPEQPEDKTVPKYRQ------------IDKRAGEFVIAWGEE 556
Query: 510 LKKSTRRFLREKPSGS 525
L+ ++P+ S
Sbjct: 557 LESQHLMIEAKQPATS 572
>gi|410074099|ref|XP_003954632.1| hypothetical protein KAFR_0A00590 [Kazachstania africana CBS 2517]
gi|372461214|emb|CCF55497.1| hypothetical protein KAFR_0A00590 [Kazachstania africana CBS 2517]
Length = 633
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 8/134 (5%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 336
K YRYG + E ++ + + GF D S++ R+Y + +A+ G+
Sbjct: 320 KAYRYGSDYAVLPPPLAEKFYYETIPGLDIRGFVDESSLPRYYLSSESVFILADTRMGSM 379
Query: 337 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL-----TPNVSEKINIPDSFYFN 391
A L AM + KVAI R V ++ +V ++ T N++ K ++ + N
Sbjct: 380 ADIFAFGVLVDAMYKNEKVAIARYVQKKLSDVEMVALIPLRISTENINAKSDVR-ALILN 438
Query: 392 VLPFAEDVREFQFP 405
+PFAED+R FP
Sbjct: 439 RIPFAEDMRVSDFP 452
>gi|406602901|emb|CCH45565.1| hypothetical protein BN7_5147 [Wickerhamomyces ciferrii]
Length = 579
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 79/192 (41%), Gaps = 27/192 (14%)
Query: 268 PSKVVPPEQR--IKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKD 325
P +V P E+ +KGY+YG V + E K+ E + + G + I R Y +
Sbjct: 289 PFEVQPIEKENLVKGYKYGKNTVVLPPTLDEKRKYLTEPGIDIRGIVSSQKIPRCYLTSE 348
Query: 326 VNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTP--------- 376
+ + + T A+ A A+ E++ A+ R V ++ + +V VL P
Sbjct: 349 ATIILGAKQSEADTRALGAFVDALTELDSFALARYVAKKNAEVQMV-VLIPVYIKKNGGL 407
Query: 377 -----NVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVS----------WQPNEQQQ 421
N E + LPF ED + FPS ++ + P+++ +
Sbjct: 408 TNKRKNDDENLEDIRGLILTRLPFYEDEKIATFPSLTEVITTSGKTITENHKLLPSDEVK 467
Query: 422 EAADNLVKMLDL 433
E D+LV ++L
Sbjct: 468 ELMDDLVTTMNL 479
>gi|154283967|ref|XP_001542779.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150410959|gb|EDN06347.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 599
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 109/256 (42%), Gaps = 35/256 (13%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSR 337
K Y++G + + + E +++ E +++++GF S + MK ++ E G
Sbjct: 343 KAYKFGGEQISFTQEEQASLRNFGEPTIRIIGFKPLSALPIWASMKHPTFIYPTEEGYVG 402
Query: 338 ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL--TPNVSEKIN--IPDSFYFNVL 393
+T SAL + + + K+A+V V R+ V+ ++ P + E IP + L
Sbjct: 403 STRVFSALYQTLLKKEKLALVWFVPRKNAAPVMAAMIPGRPKLGEDGEEVIPQGMWILPL 462
Query: 394 PFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV----KMLDLAPSGKGEILQPELTPN 449
PFA+D+R+ P A D+LV ++ L K + P+ PN
Sbjct: 463 PFADDIRQ-------------NPETNLITAPDSLVDKMRTVIQLLQLPKAQ-YDPQKYPN 508
Query: 450 PALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPK 509
P+L+ Y L+ + +D P D ++ K + ID G+FVI +
Sbjct: 509 PSLQWHYRILQALALDEDLPEQPEDKTVPKYRQ------------IDKRAGEFVIAWGEE 556
Query: 510 LKKSTRRFLREKPSGS 525
L+ ++P+ S
Sbjct: 557 LESQHLMIEAKQPATS 572
>gi|405970038|gb|EKC34975.1| ATP-dependent DNA helicase 2 subunit 1 [Crassostrea gigas]
Length = 607
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 106/241 (43%), Gaps = 26/241 (10%)
Query: 265 VEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMK 324
+ + +V+ P+ K YG + + + E +K E KL+GF +S + ++Y++K
Sbjct: 299 LRETGEVLMPQDLKKAQTYGGKRISFENDEINQIKNFGETGFKLMGFKPSSLLKKYYHVK 358
Query: 325 DVN-LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSE--K 381
++ E + +T +AL + E + AI + + + V L P E K
Sbjct: 359 PAQFIYPDETTITGSTTLFTALLKKSLERDVTAICKYISGKNFPPRFV-ALVPQEEEFDK 417
Query: 382 INI---PDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGK 438
N+ P F+ LPFA+D R+ +F K +Q E A ++K +
Sbjct: 418 QNVQISPPGFHVIYLPFADDFRKVKFEEQPK------AGSEQVEKAKEMIKKMKFT---- 467
Query: 439 GEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEP-DPTLLAESQSAIDA 497
E NP+L++++ ++E + + AP ++D T P D +L + AID
Sbjct: 468 ---FNSENFENPSLQKYWRNIEALALDR-TAPEEVED----FTLPDDERMLKRAGEAIDN 519
Query: 498 F 498
F
Sbjct: 520 F 520
>gi|112362701|emb|CAL35961.1| HDF2 protein [Saccharomyces paradoxus]
Length = 611
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 60/137 (43%), Gaps = 9/137 (6%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 336
K YRYG V + S + ++ + L GF D + R++ + + A+ G
Sbjct: 304 KAYRYGADYVVLPSILVDQTVYESFPGLDLRGFLDREALPRYFLTSESSFITADTRLGCL 363
Query: 337 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD------SFYF 390
++A SAL M E K+AI R V ++ + V + L P + E NI S
Sbjct: 364 SDSMAFSALVDVMLENRKIAIARYVSKKDSE-VNMCALCPVLIEHSNINSEKKVVKSLTL 422
Query: 391 NVLPFAEDVREFQFPSF 407
LPFAED R FP
Sbjct: 423 CRLPFAEDERVTDFPKL 439
>gi|112362703|emb|CAL35960.1| HDF2 protein [Saccharomyces paradoxus]
Length = 593
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 60/137 (43%), Gaps = 9/137 (6%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 336
K YRYG V + S + ++ + L GF D + R++ + + A+ G
Sbjct: 291 KAYRYGADYVVLPSILVDQTVYESFPGLDLRGFLDREALPRYFLTSESSFITADTRLGCL 350
Query: 337 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD------SFYF 390
++A SAL M E K+AI R V ++ + V + L P + E NI S
Sbjct: 351 SDSMAFSALVDVMLENRKIAIARYVSKKDSE-VNMCALCPVLIEHSNINSEKKVVKSLTL 409
Query: 391 NVLPFAEDVREFQFPSF 407
LPFAED R FP
Sbjct: 410 CRLPFAEDERVTDFPKL 426
>gi|112362699|emb|CAL35962.1| HDF2 protein [Saccharomyces paradoxus]
Length = 610
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 60/137 (43%), Gaps = 9/137 (6%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 336
K YRYG V + S + ++ + L GF D + R++ + + A+ G
Sbjct: 308 KAYRYGADYVVLPSILVDQTVYESFPGLDLRGFLDREALPRYFLTSESSFITADTRLGCL 367
Query: 337 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD------SFYF 390
++A SAL M E K+AI R V ++ + V + L P + E NI S
Sbjct: 368 SDSMAFSALVDVMLENRKIAIARYVSKKDSE-VNMCALCPVLIEHSNINSEKKVVKSLTL 426
Query: 391 NVLPFAEDVREFQFPSF 407
LPFAED R FP
Sbjct: 427 CRLPFAEDERVTDFPKL 443
>gi|350636255|gb|EHA24615.1| hypothetical protein ASPNIDRAFT_48713 [Aspergillus niger ATCC 1015]
Length = 639
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 108/542 (19%), Positives = 211/542 (38%), Gaps = 103/542 (19%)
Query: 27 KLCSRLIQKKLIYGKNHEVGVILFGTEET----ENELTKEVGGYEHVKVLQDIKVVDGHL 82
K +Q+++I +GV+LFGT+ + E+E ++ Y + + D+ V H
Sbjct: 50 KCAYHFMQQRIISNPQDMMGVLLFGTQASKFFEEDEDSRGDLSYPNCYLFTDLDVPSAHE 109
Query: 83 VQSLKHL--------------PQGTCAGDYMLIKKYGETYKG----KKHLCLITDALCPL 124
V+ L+ L + + + T + + L +ITD P
Sbjct: 110 VKELRALVDDEGDSREVLSPAKEQVSMANVLFCANQIFTSRAPNFLSRRLFIITDNDNPH 169
Query: 125 KDPDVGTKEDQVSTIARQMVAFGLRMK-----------------NIVVRASLSGEPHMRV 167
D T + A+ + G+ ++ + ++ SL +P
Sbjct: 170 GDDK--TLRSAATVRAKDLYDLGVTIELFPISRPEHEFKNSKFYDDIIYKSLPSDPEAPA 227
Query: 168 IIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRG-DLELSEKMKIKVWV 226
+++D SK ++A + +L + +R + T F LEL +I V
Sbjct: 228 YLQSD------SKAATATGDGISLLNTLLSSINSRTVPRRTHFSNMPLELGPDFRISVSG 281
Query: 227 YKKTGEEKFPTLKKYSDKAPSTDKFATHE-----VKVDYEYKSVEDPSKVVPPEQRIKGY 281
Y L++ +AP+ + F V S +D + V + K Y
Sbjct: 282 YI--------LLRR---QAPARNSFIWLNGEKPVVAKGVTSHSADDTGRTVEKWEIRKAY 330
Query: 282 RYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI-----LRHYYMKDVNLFIAEPGNS 336
++G V S E +A++ E ++++GF + + ++H Y ++ +E
Sbjct: 331 KFGGDQVTFSPDEQKALRDFGEPVIRVIGFKPITALPFWANVKHPYF----IYPSEEDYV 386
Query: 337 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN------IPDSFYF 390
++ SAL + + K+A+V + R+G V+ ++ EK++ P +
Sbjct: 387 GSSRVFSALHQTLLRSKKMALVWFIARKGAGPVLAAMIA--GEEKLDENGVQKYPPGMWI 444
Query: 391 NVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNP 450
LPFA+D+R+ + + P E + +V+ L L P G + +P PNP
Sbjct: 445 LPLPFADDIRQNPETTLNVAP------ESLIDQMRVVVQQLQL-PKG---VYEPLKYPNP 494
Query: 451 ALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKL 510
+L+ Y L+ + +D P D ++ K + ID G +V+ +L
Sbjct: 495 SLQWHYRILQALALDEDLPEKPEDKTIPKYRQ------------IDKRAGDYVLSWADEL 542
Query: 511 KK 512
+K
Sbjct: 543 EK 544
>gi|449542391|gb|EMD33370.1| hypothetical protein CERSUDRAFT_108161 [Ceriporiopsis subvermispora
B]
Length = 677
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 108/534 (20%), Positives = 191/534 (35%), Gaps = 98/534 (18%)
Query: 5 REALLLLLDVSPSMHSVLPDVE----KLCS---------RLIQKKLIYGKNHEVGVILFG 51
++ +L +D SPSM + D + C ++ +KK+I G N VG++LF
Sbjct: 28 KDVILFCIDCSPSMQELYDDERYEDVQTCRLFTALEAAMQIQKKKVIVGPNDSVGIMLFN 87
Query: 52 TEETENELTKEVGG--YEHVKVLQDIKVVDGHLVQSLKHL-------------------- 89
T NE T G + V Q I +D VQ L L
Sbjct: 88 TTR-RNEATAGQGAEIKKGTYVYQPIATIDAPKVQELMRLLDAVRDKPKLLSQEFPPLTE 146
Query: 90 ---PQGTCAGDYMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIAR----Q 142
P G + + G + K + LITD DP G D+++ A+
Sbjct: 147 SRVPMGDVFTSCNWVMRDGASKTAVKRVFLITDE----DDPHPGPTHDRLAKSAKTTLED 202
Query: 143 MVAFGLRMKNIVVRA---SLSGEPHMRVIIENDNLLNIFSKKSSA--KTLFVDSTTSLRG 197
++ G+ ++ + + S ++ N++ + +++ + L
Sbjct: 203 LLQAGVTVEPFFISSEDKSFDPSKFYSFVLSPTNVIEDAESGGAVLPESISIARVEDLLS 262
Query: 198 ARKTRDISPVTIFRGDLELSEKMKIKVWVY------KKTGEEKFPTL------------- 238
+ ++ F L+L+E I V Y KK E F L
Sbjct: 263 QMRFHEVPKRAFFSTRLQLAEGFVIGVKGYTPVTERKKGKHEYFYDLGDRMVVAKSRSIM 322
Query: 239 -----KKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSA 293
Y+DK+ + +D E + E V R+ P
Sbjct: 323 VDDMSHAYADKSEILSGMTLGKASMDEEKEDAEQAVGVA----RVTQANMRPFYTQDEIN 378
Query: 294 EWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSRATVAVSALARAMKEM 352
+ + +P +KLLGF D S + +K ++ E S + +AL R M
Sbjct: 379 SFRTMGLEP--MIKLLGFKDISELAYEDNVKHSTFIYPDEMTYSGSKRTFTALLRTMVRK 436
Query: 353 NKVAIVRCVWRQGQQSVVVGVL--TPNVSEK-INIPDSFYFNVLPFAEDVREFQFPSFSK 409
K+ I + R+ +L P E + P + LPFA+D+R ++
Sbjct: 437 KKIGIALGLARRNSTPTFYAMLPQLPKTDESGWDDPPGIHLIPLPFADDIRA------AR 490
Query: 410 FPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKS 463
++Q N + ++ A + + + G P+ PNP+L YH+ +L++
Sbjct: 491 VERAYQANSELEKMARAWIDKITVRQGG----YPPDTYPNPSLA--YHNAQLEA 538
>gi|349580387|dbj|GAA25547.1| K7_Yku80p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 629
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 59/137 (43%), Gaps = 9/137 (6%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 336
K YRYG V + S + ++ + L GF D + R++ + + A+ G
Sbjct: 315 KAYRYGADYVVLPSVLVDQTVYESFPGLDLRGFLDREALPRYFLTSESSFITADTRLGCQ 374
Query: 337 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD------SFYF 390
+A SAL M E K+A+ R V ++ + V + L P + E NI S
Sbjct: 375 SDLMAFSALVDVMLENRKIAVARYVSKKDSE-VNMCALCPVLIEHSNINSEKKFVKSLTL 433
Query: 391 NVLPFAEDVREFQFPSF 407
LPFAED R FP
Sbjct: 434 CRLPFAEDERVTDFPKL 450
>gi|112362725|emb|CAL35949.1| HDF2 protein [Saccharomyces paradoxus]
Length = 612
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 60/137 (43%), Gaps = 9/137 (6%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 336
K YRYG V + S + ++ + + GF D + R++ + + A+ G
Sbjct: 305 KAYRYGADYVVLPSVLVDQTVYESFPGLDVRGFLDGEALPRYFLTSESSFITADTRLGCL 364
Query: 337 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD------SFYF 390
++A SAL M E K+AI R V ++ + V + L P + E NI S
Sbjct: 365 SDSMAFSALVDVMLENRKIAIARYVSKKDSE-VNMCALCPVLIEHSNIDSEKKVVKSLTL 423
Query: 391 NVLPFAEDVREFQFPSF 407
LPFAED R FP
Sbjct: 424 CRLPFAEDERVTDFPKL 440
>gi|261189322|ref|XP_002621072.1| DSB repair complex subunit Ku70 [Ajellomyces dermatitidis SLH14081]
gi|239591649|gb|EEQ74230.1| DSB repair complex subunit Ku70 [Ajellomyces dermatitidis SLH14081]
Length = 655
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 95/212 (44%), Gaps = 17/212 (8%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSR 337
K Y++G + + + E A++ E +++++GF S + MK ++ +E G
Sbjct: 343 KAYKFGGEQISFTQEEQAALRNFGEPTIRIIGFKPLSALPIWASMKHPTFIYPSEEGYVG 402
Query: 338 ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNV-----SEKINIPDSFYFNV 392
+T SAL + + + K+A+V V R+ V+ ++ E+I IP +
Sbjct: 403 STRVFSALYQTLLKKEKLALVWFVPRKNAAPVMAAMIPGTAKLDEDGEEI-IPQGMWILP 461
Query: 393 LPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPAL 452
LPFA+D+R+ + P E D + ++ L K + P+ PNP+L
Sbjct: 462 LPFADDIRQNPETNLITAP---------DELVDKMRTVIQLLQLPKAQ-YDPQKYPNPSL 511
Query: 453 ERFYHHLELKSEHQDAAPPPLDDSLKKITEPD 484
+ Y L+ + +D P D ++ K + D
Sbjct: 512 QWHYRILQALALDEDLPEQPEDKTIPKYRQID 543
>gi|239609039|gb|EEQ86026.1| protein Ku70 [Ajellomyces dermatitidis ER-3]
gi|327354321|gb|EGE83178.1| Ku70 [Ajellomyces dermatitidis ATCC 18188]
Length = 655
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 95/212 (44%), Gaps = 17/212 (8%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSR 337
K Y++G + + + E A++ E +++++GF S + MK ++ +E G
Sbjct: 343 KAYKFGGEQISFTQEEQAALRNFGEPTIRIIGFKPLSALPIWASMKHPTFIYPSEEGYVG 402
Query: 338 ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNV-----SEKINIPDSFYFNV 392
+T SAL + + + K+A+V V R+ V+ ++ E+I IP +
Sbjct: 403 STRVFSALYQTLLKKEKLALVWFVPRKNAAPVMAAMIPGTAKLDEDGEEI-IPQGMWILP 461
Query: 393 LPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPAL 452
LPFA+D+R+ + P E D + ++ L K + P+ PNP+L
Sbjct: 462 LPFADDIRQNPETNLITAP---------DELVDKMRTVIQLLQLPKAQ-YDPQKYPNPSL 511
Query: 453 ERFYHHLELKSEHQDAAPPPLDDSLKKITEPD 484
+ Y L+ + +D P D ++ K + D
Sbjct: 512 QWHYRILQALALDEDLPEQPEDKTIPKYRQID 543
>gi|160934662|ref|ZP_02082048.1| hypothetical protein CLOLEP_03535 [Clostridium leptum DSM 753]
gi|156866115|gb|EDO59487.1| Ku protein [Clostridium leptum DSM 753]
Length = 269
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 88/186 (47%), Gaps = 27/186 (14%)
Query: 278 IKGYRYGP-QVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNS 336
+KG+ Y + V ++ ++E +K + ++S+++L FTD S+I YY K + + E G
Sbjct: 61 VKGFEYDKDKYVIVTDDDFEKIKTEKDRSIQILHFTDLSSIRPIYYDKTYHA-VPETGGD 119
Query: 337 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFA 396
+ A L +AMK+ NK+A+ + V GQ+ ++ V+ + D L +A
Sbjct: 120 K---AFELLRQAMKQENKIAVAKTVM--GQKETLLAVIPTD--------DGILIETLFYA 166
Query: 397 EDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFY 456
++++E P P +E + A L+ ++ + QPEL + ER
Sbjct: 167 DEIKE--LPKEYSHPAV---SEAELAMAKTLINSMN-------QEFQPELYKDEYQERLK 214
Query: 457 HHLELK 462
+E K
Sbjct: 215 ALIEQK 220
>gi|346325135|gb|EGX94732.1| DSB repair complex subunit Ku70, putative [Cordyceps militaris
CM01]
Length = 643
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 92/203 (45%), Gaps = 17/203 (8%)
Query: 265 VEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI-LRHYYM 323
ED ++ V + K Y++G + V S E ++VK ++++GF +I L
Sbjct: 321 AEDSTRTVEKGEIKKAYKFGGEYVYFSPEEQKSVKDFGSPVIRIIGFKSRRSIPLWSSVK 380
Query: 324 KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN 383
K ++ +E +T +AL + + +KVA+ C+ R V+ ++ P+ S+
Sbjct: 381 KSTFIYPSEEDYVGSTRVFTALWEKLLKDDKVALAWCIVRSNANPVLTAIM-PSKSQSDE 439
Query: 384 ------IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSG 437
+P + LPFA+D+R+ + P K Q ++ + +++ L L +
Sbjct: 440 YSGTPFLPAGLWLYPLPFADDLRDIKPP--GKLA---QASDDLKTQMRTIIQQLQLPKA- 493
Query: 438 KGEILQPELTPNPALERFYHHLE 460
+ P PNP+L+ Y L+
Sbjct: 494 ---MYNPTKYPNPSLQWHYKILQ 513
Score = 42.7 bits (99), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 19/114 (16%)
Query: 5 REALLLLLDVSPSMHSVLPDVE--------------KLCSRLIQKKLIYGKNHEVGVILF 50
++A+LL ++VS SM P + K +++++I +G++LF
Sbjct: 28 KDAVLLAIEVSESMLRAPPPSDSKKADRDSPVQAALKCAYHFVEQRIISNPKDMIGILLF 87
Query: 51 GTEETENELTKEVG----GYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDYML 100
GTE+T +L E G GY H + D+ V V++LK L + GD +L
Sbjct: 88 GTEKTRFQL-DENGRSGLGYPHCYLFTDLDVPSADDVKALKSLVEDEETGDDIL 140
>gi|151946262|gb|EDN64493.1| KU protein [Saccharomyces cerevisiae YJM789]
Length = 629
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 59/137 (43%), Gaps = 9/137 (6%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 336
K YRYG V + S + ++ + L GF D + R++ + + A+ G
Sbjct: 315 KAYRYGADYVVLPSVLVDQTVYESFPGLDLRGFLDREALPRYFLTSESSFITADTRLGCQ 374
Query: 337 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD------SFYF 390
+A SAL M E K+A+ R V ++ + V + L P + E NI S
Sbjct: 375 SDLMAFSALVDVMLENRKIAVARYVSKKDSE-VNMCALCPVLIEHSNINSEKKFVKSLTL 433
Query: 391 NVLPFAEDVREFQFPSF 407
LPFAED R FP
Sbjct: 434 CRLPFAEDERVTDFPKL 450
>gi|112362657|emb|CAL35983.1| HDF2 protein [Saccharomyces cerevisiae]
gi|112362661|emb|CAL35981.1| HDF2 protein [Saccharomyces cerevisiae]
gi|112362677|emb|CAL35973.1| HDF2 protein [Saccharomyces cerevisiae]
Length = 629
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 59/137 (43%), Gaps = 9/137 (6%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 336
K YRYG V + S + ++ + L GF D + R++ + + A+ G
Sbjct: 315 KAYRYGADYVVLPSVLVDQTVYESFPGLDLRGFLDREALPRYFLTSESSFITADTRLGCQ 374
Query: 337 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD------SFYF 390
+A SAL M E K+A+ R V ++ + V + L P + E NI S
Sbjct: 375 SDLMAFSALVDVMLENRKIAVARYVSKKDSE-VNMCALCPVLIEHSNINSEKKFVKSLTL 433
Query: 391 NVLPFAEDVREFQFPSF 407
LPFAED R FP
Sbjct: 434 CRLPFAEDERVTDFPKL 450
>gi|146162847|ref|XP_001470738.1| ku P70 DNA helicase [Tetrahymena thermophila]
gi|146146270|gb|EDK31925.1| ku P70 DNA helicase [Tetrahymena thermophila SB210]
Length = 711
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 100/228 (43%), Gaps = 36/228 (15%)
Query: 284 GPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSR---ATV 340
G + V +S + +K E ++L+GF S L+ Y+ + F+ P + ++
Sbjct: 324 GGEKVKVSKGDINEIKSFEEPGMRLIGFK-PSGTLKAYHNYRTSYFVY-PDDYHVKGSSQ 381
Query: 341 AVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVS---EKINIPDSFYFNVLPFAE 397
+ AL M +K+AIVR + R+G Q +L S + + P F+ LP+A+
Sbjct: 382 SFHALISQMIAKDKIAIVRFIPRKGTQVRFCALLPQEESYDEDHVQTPPGFHLIFLPYAD 441
Query: 398 DVREFQFPSFSKFPVSWQPNEQQQEAADNLV---KM----LDLAPSGKGEILQPELTPNP 450
D R S +P +Q++E + NL+ KM LDLA +P
Sbjct: 442 DQRNLG---------SIRP-QQKEEVSRNLLNAAKMMCNALDLAN------FDFRNFEDP 485
Query: 451 ALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAF 498
+L++F+ HL+ + ++ P D + +PD + + I F
Sbjct: 486 SLQKFFAHLQAHALQEENPENPAD-----LIQPDEEGMKRCEDIIKLF 528
>gi|112362727|emb|CAL35948.1| HDF2 protein [Saccharomyces paradoxus]
Length = 606
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 60/137 (43%), Gaps = 9/137 (6%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 336
K YRYG V + S + ++ + + GF D + R++ + + A+ G
Sbjct: 305 KAYRYGADYVVLPSVLVDQTVYESFPGLDVRGFLDGEALPRYFLTSESSFITADTRLGCL 364
Query: 337 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD------SFYF 390
++A SAL M E K+AI R V ++ + V + L P + E NI S
Sbjct: 365 SDSMAFSALVDVMLENRKIAIARYVSKKDSE-VNMCALCPVLIEHSNIDSEKKVVKSLTL 423
Query: 391 NVLPFAEDVREFQFPSF 407
LPFAED R FP
Sbjct: 424 CRLPFAEDERVTDFPKL 440
>gi|112362709|emb|CAL35957.1| HDF2 protein [Saccharomyces paradoxus]
Length = 601
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 71/172 (41%), Gaps = 23/172 (13%)
Query: 258 VDYEYKSVEDPSKV--------------VPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE 303
++YE +S E+ V + E K YRYG V + S + ++
Sbjct: 263 IEYEIRSEENKKNVNEGDKLESSYIPVTISKESVTKAYRYGADYVVLPSVLVDQTVYESF 322
Query: 304 KSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNSRATVAVSALARAMKEMNKVAIVRCV 361
+ + GF D + R++ + + A+ G ++A SAL M E K+AI R V
Sbjct: 323 PGLDVRGFLDREALPRYFLTSESSFITADTRLGCLSDSMAFSALVDVMLENRKIAIARYV 382
Query: 362 WRQGQQSVVVGVLTPNVSEKINIPD------SFYFNVLPFAEDVREFQFPSF 407
++ + V + L P + E NI S LPFAED R FP
Sbjct: 383 SKKDSE-VNMCALCPVLIEHSNIDSEKKVVKSLTLCRLPFAEDERVTDFPKL 433
>gi|146182742|ref|XP_001025145.2| ATP-dependent DNA helicase ii, 70 kDa subunit (ku70) [Tetrahymena
thermophila]
gi|146143715|gb|EAS04900.2| ATP-dependent DNA helicase ii, 70 kDa subunit (ku70) [Tetrahymena
thermophila SB210]
Length = 727
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 63/130 (48%), Gaps = 13/130 (10%)
Query: 288 VPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSR---ATVAVSA 344
V I E + +K E +KL+GF D S L+ Y+ +LFI P NS ++ A
Sbjct: 337 VRIDKDELQQIKNLEEVGMKLIGFKDKS-FLKVYFNLKPSLFIY-PDNSLVKGSSQLFDA 394
Query: 345 LARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSE-----KINIPDSFYFNVLPFAEDV 399
L + M + KVAIV+ + R+G Q + G L P + E + IP F+ LP+ ++
Sbjct: 395 LIKKMIQKEKVAIVKIINRKGGQ-LRFGCLLPQLEEYSPVDHVQIPPGFHLITLPYCGEI 453
Query: 400 REFQFPSFSK 409
P F K
Sbjct: 454 N--HLPKFVK 461
>gi|50548281|ref|XP_501610.1| YALI0C08701p [Yarrowia lipolytica]
gi|74604554|sp|Q6CCK2.1|KU70_YARLI RecName: Full=ATP-dependent DNA helicase II subunit 1; AltName:
Full=ATP-dependent DNA helicase II subunit Ku70
gi|49647477|emb|CAG81913.1| YALI0C08701p [Yarrowia lipolytica CLIB122]
Length = 585
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 124/297 (41%), Gaps = 52/297 (17%)
Query: 223 KVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYR 282
K WVY TG EK P K + V ++E V + R K ++
Sbjct: 266 KAWVY--TGGEK-----------PEIAKLESQAV-------TIESGRSVDKADLR-KTFK 304
Query: 283 YGPQVVPISSAEWEAVKFKPEKSVKLLGF---TDASNILRHYYMKDVNLFIAEPGNSRAT 339
+G VP + + +++ E +++LGF +D S + H + L+ + +
Sbjct: 305 FGNDYVPFTEEQLTQIRYFGEPIIRILGFHNSSDFSELFIHSVRSSMFLYPTDEKLVGSI 364
Query: 340 VAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDV 399
A SAL +++K +K+A+ + R+G + ++ +L P+ E + + LPF +D+
Sbjct: 365 RAFSALYQSLKNKDKMALAWVIVRKGAKP-ILALLIPSTKE----IEGLHMVFLPFTDDI 419
Query: 400 REFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHL 459
R Q P VS P + +A N+ L + P G + + PNP L+ Y +
Sbjct: 420 R--QEPKTEL--VSAAP--ELVDATKNIFTRLRM-PGG----FESQRYPNPRLQWHYRVV 468
Query: 460 ELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRR 516
+ ++ P D + K +ID G + + N L+ S++R
Sbjct: 469 RAMALQEEVPKVPEDKTTPKY------------RSIDTRVGDAIEEWNKVLQSSSKR 513
>gi|358373931|dbj|GAA90526.1| DSB repair complex subunit Ku70 [Aspergillus kawachii IFO 4308]
Length = 653
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 115/576 (19%), Positives = 222/576 (38%), Gaps = 113/576 (19%)
Query: 5 REALLLLLDVSPSMHSVLPDVE--------------KLCSRLIQKKLIYGKNHEVGVILF 50
++A+L +DVS SM + P + K +Q+++I +GV+LF
Sbjct: 28 KDAVLFAIDVSDSMLTPRPSADPKKHTQESPTTAALKCAYHFMQQRIISNPQDMMGVLLF 87
Query: 51 GTEET----ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL--------------PQG 92
GT+ + E+E ++ Y + + D+ V V+ L+ L +
Sbjct: 88 GTQASKFFEEDEDSRGDLSYPNCYLFTDLDVPSAQEVKELRALVDDDGDSRDILAPAKEQ 147
Query: 93 TCAGDYMLIKKYGETYKG----KKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGL 148
+ + T + + L +ITD P D T + A+ + G+
Sbjct: 148 VSMANVLFCANQIFTSRAPNFLSRRLFIITDNDNPHGDDK--TLRSAATVRAKDLYDLGV 205
Query: 149 RMK-----------------NIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDS 191
++ + ++ S +P ++ D SK ++A +
Sbjct: 206 TIELFPISRPEHEFKNSKFYDDIIYKSSPNDPEAPAYLQTD------SKAATATGDGISL 259
Query: 192 TTSLRGARKTRDISPVTIFRG-DLELSEKMKIKVWVY---KKTGEEKFPTLKKYSDKAPS 247
+L + +R + T F LEL KI V Y ++ + + +K
Sbjct: 260 LNTLLSSINSRTVPRRTHFSNMPLELGPDFKISVSGYILLRRQAPARNSFIWLNGEKPVV 319
Query: 248 TDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVK 307
TH S +D + V + K Y++G V S E +A++ E ++
Sbjct: 320 AKGVTTH---------SADDTGRNVEKWEIRKAYKFGGDQVTFSPDEQKALRDFGEPVIR 370
Query: 308 LLGFTDASNI-----LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVW 362
++GF + + ++H Y ++ +E ++ SAL + + K+A+V +
Sbjct: 371 VIGFKPITALPFWANVKHPYF----IYPSEEDYVGSSRVFSALHQMLLRNKKMALVWFIA 426
Query: 363 RQGQQSVVVGVLTPNVSEKIN------IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQP 416
R+G V+ ++ EK++ P + LPFA+D+R Q P + V+ +P
Sbjct: 427 RKGAGPVLAAMIA--GEEKLDENGVQKYPPGMWILPLPFADDIR--QNPE-TTLNVAPEP 481
Query: 417 NEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDS 476
Q +++ L L P G + +P PNP+L+ Y L+ + +D P D +
Sbjct: 482 LIDQMRV---VIQQLQL-PKG---VYEPLRYPNPSLQWHYRILQALALDEDLPEKPEDRT 534
Query: 477 LKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKK 512
+ K + ID G +V+ +L+K
Sbjct: 535 IPKYRQ------------IDKRAGDYVLSWADELEK 558
>gi|367008522|ref|XP_003678762.1| hypothetical protein TDEL_0A02190 [Torulaspora delbrueckii]
gi|359746419|emb|CCE89551.1| hypothetical protein TDEL_0A02190 [Torulaspora delbrueckii]
Length = 626
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 74/166 (44%), Gaps = 6/166 (3%)
Query: 248 TDKFATHEVKVDYE-YKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSV 306
T ++ + ++YE Y D V PE K YRYG V + S E ++ +
Sbjct: 283 TAQYEMVKTVIEYEVYDQKADKRVSVAPESIAKAYRYGSDYVVLPSTLDEQRFYRTTPGI 342
Query: 307 KLLGFTDASNILRHYYMKDVNLFIAE--PGNSRATVAVSALARAMKEMNKVAIVRCVWRQ 364
+ GF + + R++ + +A+ G+ V+ + L ++ E +K+ + R V +
Sbjct: 343 DIRGFLERKRLPRYFLNSESRFILADTRSGSVADIVSFNVLVDSLSEQDKLIVARFVAKP 402
Query: 365 GQQSVVVGVLTPNV--SEKINIPDSFYFNVLPFAEDVREFQFPSFS 408
+ V + ++ P + E + + N LPFAED R FP +
Sbjct: 403 NAE-VQMCMMCPMLVNDEHGDKIRTLILNRLPFAEDERVASFPRLT 447
>gi|112362721|emb|CAL35951.1| HDF2 protein [Saccharomyces paradoxus]
Length = 605
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 61/137 (44%), Gaps = 9/137 (6%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 336
K YRYG V + S + ++ + L GF D + R++ + + A+ G
Sbjct: 303 KAYRYGADYVVLPSILVDQTVYESFPGLDLRGFLDREALPRYFLTSESSFITADTRLGCL 362
Query: 337 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTP------NVSEKINIPDSFYF 390
++A SAL M E K+A+ R V ++ + V + L P N++ + + S
Sbjct: 363 SDSMAFSALVDVMLENRKIAVARYVSKKDSE-VNMCALCPVLIGHSNINSEKKVVKSLTL 421
Query: 391 NVLPFAEDVREFQFPSF 407
LPFAED R FP
Sbjct: 422 CRLPFAEDERVTDFPKL 438
>gi|112362717|emb|CAL35953.1| HDF2 protein [Saccharomyces paradoxus]
Length = 607
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 61/137 (44%), Gaps = 9/137 (6%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 336
K YRYG V + S + ++ + L GF D + R++ + + A+ G
Sbjct: 305 KAYRYGADYVVLPSILVDQTVYESFPGLDLRGFLDREALPRYFLTSESSFITADTRLGCL 364
Query: 337 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTP------NVSEKINIPDSFYF 390
++A SAL M E K+A+ R V ++ + V + L P N++ + + S
Sbjct: 365 SDSMAFSALVDVMLENRKIAVARYVSKKDSE-VNMCALCPVLIGHSNINSEKKVVKSLTL 423
Query: 391 NVLPFAEDVREFQFPSF 407
LPFAED R FP
Sbjct: 424 CRLPFAEDERVTDFPKL 440
>gi|112362719|emb|CAL35952.1| HDF2 protein [Saccharomyces paradoxus]
Length = 608
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 61/137 (44%), Gaps = 9/137 (6%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 336
K YRYG V + S + ++ + L GF D + R++ + + A+ G
Sbjct: 304 KAYRYGADYVVLPSILVDQTVYESFPGLDLRGFLDREALPRYFLTSESSFITADTRLGCL 363
Query: 337 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTP------NVSEKINIPDSFYF 390
++A SAL M E K+A+ R V ++ + V + L P N++ + + S
Sbjct: 364 SDSMAFSALVDVMLENRKIAVARYVSKKDSE-VNMCALCPVLIGHSNINSEKKVVKSLTL 422
Query: 391 NVLPFAEDVREFQFPSF 407
LPFAED R FP
Sbjct: 423 CRLPFAEDERVTDFPKL 439
>gi|112362695|emb|CAL35964.1| HDF2 protein [Saccharomyces paradoxus]
Length = 606
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 61/137 (44%), Gaps = 9/137 (6%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 336
K YRYG V + S + ++ + L GF D + R++ + + A+ G
Sbjct: 304 KAYRYGADYVVLPSILVDQTVYESFPGLDLRGFLDREALPRYFLTSESSFITADTRLGCL 363
Query: 337 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTP------NVSEKINIPDSFYF 390
++A SAL M E K+A+ R V ++ + V + L P N++ + + S
Sbjct: 364 SDSMAFSALVDVMLENRKIAVARYVSKKDSE-VNMCALCPVLIGHSNINSEKKVVKSLTL 422
Query: 391 NVLPFAEDVREFQFPSF 407
LPFAED R FP
Sbjct: 423 CRLPFAEDERVTDFPKL 439
>gi|302667955|ref|XP_003025556.1| hypothetical protein TRV_00318 [Trichophyton verrucosum HKI 0517]
gi|291189670|gb|EFE44945.1| hypothetical protein TRV_00318 [Trichophyton verrucosum HKI 0517]
Length = 651
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 110/259 (42%), Gaps = 36/259 (13%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSR 337
K Y++G + V + E ++ E ++++LGF S++ MK L+ +E G
Sbjct: 342 KAYKFGGEQVSFTQEEQAEIRNFGEPTIRILGFKPLSSLPIWASMKHPTFLYPSEEGYVG 401
Query: 338 ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN------IPDSFYFN 391
+T SAL + + + K+A+V V R+ V+ ++ EK++ IP +
Sbjct: 402 STRTFSALHQTLLKQKKMALVWFVPRRNAAPVMAAMIA--GEEKLDENGEQTIPPGMWIL 459
Query: 392 VLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQ-----PEL 446
LPFA+D+R+ P A D+L+ + P + LQ P+
Sbjct: 460 PLPFADDIRQ-------------NPETNHITAPDSLIN--KMRPIIRPLQLQNAQYDPQR 504
Query: 447 TPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKE 506
PNP+L+ Y L+ + +D P D + P A ++ G VI+
Sbjct: 505 YPNPSLQWHYKILQALALDEDLPEEPEDKT-------KPKYKAIDKANDMQRTGDLVIEW 557
Query: 507 NPKLKKSTRRFLREKPSGS 525
+L+ R + +P+ S
Sbjct: 558 GEELEAQYRALEKSQPATS 576
>gi|402218254|gb|EJT98331.1| ku70-like protein [Dacryopinax sp. DJM-731 SS1]
Length = 678
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 118/566 (20%), Positives = 216/566 (38%), Gaps = 111/566 (19%)
Query: 4 TREALLLLLDVSPSMHSVLPDV-------EKLCSR--------------LIQKKLIYGKN 42
+++A++L + S SMH+V ++ EK R L ++K++ G N
Sbjct: 29 SKDAIILAIQCSESMHTVREELLKSEDEDEKGKGRGRTSFEIALRSTVELQKRKVVVGPN 88
Query: 43 HEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQ------------------ 84
VG++ + T + +++ G Y H+ V +++ ++ +Q
Sbjct: 89 DSVGIVFWDTVRS-FAFSQKQGDYRHMYVYKEVGLITAESIQEQMHLLARAQEKNPTYLR 147
Query: 85 -----SLKHLPQGTCAGDYMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTI 139
S +H+P + + G G + L+TD DP G D+ +
Sbjct: 148 KRFQPSTEHMPISDMLTACNAMLRTGAPKSGTHRIFLLTDE----DDPTAGLPADRRIKL 203
Query: 140 ---ARQMVAFGLRMKNIVVRASLSGEPHM----RVIIENDNLLNIFSKKSSAKTLFVDST 192
AR ++ +S H + E + S+ + V
Sbjct: 204 LQSARTRAGDTYEKGWNIIPFFISTPEHTFDPSKFWREALSREGEEGGSSTGEGDLVSGF 263
Query: 193 TSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVY-----KKTGEEKF-----PTLKKYS 242
L + R+I T+F L L+E + I + Y + G+ K+ LK+ +
Sbjct: 264 EELLREMQVREIPRRTLFHVPLILAEGITIDIKGYGLVTVQSKGQYKYLADRDGMLKEAT 323
Query: 243 DKAPSTDKFATHEV-KVDYEY----------KSVEDPSKVVPPEQR---IKGYRYGPQVV 288
K DK EV K D Y + ++P +V E++ ++G R VV
Sbjct: 324 VKTTYIDKDDQGEVPKTDIRYALPFGKTWGDEQQDEPMEVDETEEKKPKMRGRRGNILVV 383
Query: 289 P-ISSAEWEAVKFKPEK-----------SVKLLGFTDASNILRHYYMK-DVNLFIAEPGN 335
+ + V F PE+ S+KLLGF D + +K V ++ +E
Sbjct: 384 EGVPAVTRHEVLFTPERMKELRSMVLEPSIKLLGFKDRGELTFFDNVKHSVFIYPSEDDY 443
Query: 336 SRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN------IPDSFY 389
+ +T +AL +++ + +K+ I V R+G V +L P E + +P +
Sbjct: 444 TGSTRTFAALLQSLIKKDKIGIALSVTRRGYTPQFVALL-PRQEELDSDTGAQLLPPGLH 502
Query: 390 FNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPN 449
PFA+D+RE S + Q E +++AA + L + + PN
Sbjct: 503 MIPFPFADDIRE------SAYDQLMQCTEHEKDAALAWINKLTIRAG-----YDADNYPN 551
Query: 450 PALERFYHHLELKSEHQDAAPPPLDD 475
P L Y +LE + ++ P +D
Sbjct: 552 PTLRLHYKNLEAAAFNEAFDPSEFED 577
>gi|112362715|emb|CAL35954.1| HDF2 protein [Saccharomyces paradoxus]
Length = 605
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 60/137 (43%), Gaps = 9/137 (6%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 336
K YRYG V + S + ++ + + GF D + R++ + + A+ G
Sbjct: 303 KAYRYGADYVVLPSVLVDQTVYESFPGLDVRGFLDREALPRYFLTSESSFITADTRLGCL 362
Query: 337 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD------SFYF 390
++A SAL M E K+AI R V ++ + V + L P + E NI S
Sbjct: 363 SDSMAFSALVDVMLENRKIAIARYVSKKDSE-VNMCALCPVLIEHSNIDSEKKVVKSLTL 421
Query: 391 NVLPFAEDVREFQFPSF 407
LPFAED R FP
Sbjct: 422 CRLPFAEDERVTDFPKL 438
>gi|112362713|emb|CAL35955.1| HDF2 protein [Saccharomyces paradoxus]
Length = 610
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 60/137 (43%), Gaps = 9/137 (6%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 336
K YRYG V + S + ++ + + GF D + R++ + + A+ G
Sbjct: 303 KAYRYGADYVVLPSVLVDQTVYESFPGLDVRGFLDREALPRYFLTSESSFITADTRLGCL 362
Query: 337 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD------SFYF 390
++A SAL M E K+AI R V ++ + V + L P + E NI S
Sbjct: 363 SDSMAFSALVDVMLENRKIAIARYVSKKDSE-VNMCALCPVLIEHSNIDSEKKVVKSLTL 421
Query: 391 NVLPFAEDVREFQFPSF 407
LPFAED R FP
Sbjct: 422 CRLPFAEDERVTDFPKL 438
>gi|336270558|ref|XP_003350038.1| hypothetical protein SMAC_00927 [Sordaria macrospora k-hell]
gi|111120025|emb|CAJ41424.1| ATP-dependent DNA helicase II, 70 kDa subunit [Sordaria macrospora]
gi|380095429|emb|CCC06902.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 646
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 91/206 (44%), Gaps = 15/206 (7%)
Query: 258 VDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI 317
V E V+ ++ V + KGY++G + + E +K +K+++++GF S I
Sbjct: 313 VQSETAQVDFAARTVEKTELRKGYKFGGEHICFKPEELAELKQMGKKTLRIIGFKKRSKI 372
Query: 318 LRHYYM-KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL-- 374
+ K + +F +E +T SAL + + + +KV I V R+ V+V +
Sbjct: 373 PSWASVKKSLFIFPSEEQYVGSTRVFSALWQKLLKDDKVGIAWFVARENAHPVMVAIFPS 432
Query: 375 -TPNVSEKIN--IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKML 431
P+ E +P + LPFA+DVR S +P ++ + +++ L
Sbjct: 433 GNPDDEESNTPYLPAGLWLYPLPFADDVR-----SVDHVTAPARPADELTDQMRQVIQNL 487
Query: 432 DLAPSGKGEILQPELTPNPALERFYH 457
L + + P PNP+L+ Y
Sbjct: 488 QLPKA----MYDPRKYPNPSLQWHYR 509
>gi|112362711|emb|CAL35956.1| HDF2 protein [Saccharomyces paradoxus]
Length = 604
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 60/137 (43%), Gaps = 9/137 (6%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 336
K YRYG V + S + ++ + + GF D + R++ + + A+ G
Sbjct: 303 KAYRYGADYVVLPSVLVDQTVYESFPGLDVRGFLDREALPRYFLTSESSFITADTRLGCL 362
Query: 337 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD------SFYF 390
++A SAL M E K+AI R V ++ + V + L P + E NI S
Sbjct: 363 SDSMAFSALVDVMLENRKIAIARYVSKKDSE-VNMCALCPVLIEHSNIDSEKKVVKSLTL 421
Query: 391 NVLPFAEDVREFQFPSF 407
LPFAED R FP
Sbjct: 422 CRLPFAEDERVTDFPKL 438
>gi|112362707|emb|CAL35958.1| HDF2 protein [Saccharomyces paradoxus]
gi|112362723|emb|CAL35950.1| HDF2 protein [Saccharomyces paradoxus]
Length = 606
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 60/137 (43%), Gaps = 9/137 (6%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 336
K YRYG V + S + ++ + + GF D + R++ + + A+ G
Sbjct: 304 KAYRYGADYVVLPSVLVDQTVYESFPGLDVRGFLDREALPRYFLTSESSFITADTRLGCL 363
Query: 337 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD------SFYF 390
++A SAL M E K+AI R V ++ + V + L P + E NI S
Sbjct: 364 SDSMAFSALVDVMLENRKIAIARYVSKKDSE-VNMCALCPVLIEHSNIDSEKKVVKSLTL 422
Query: 391 NVLPFAEDVREFQFPSF 407
LPFAED R FP
Sbjct: 423 CRLPFAEDERVTDFPKL 439
>gi|112362705|emb|CAL35959.1| HDF2 protein [Saccharomyces paradoxus]
Length = 611
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 60/137 (43%), Gaps = 9/137 (6%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 336
K YRYG V + S + ++ + + GF D + R++ + + A+ G
Sbjct: 304 KAYRYGADYVVLPSVLVDQTVYESFPGLDVRGFLDREALPRYFLTSESSFITADTRLGCL 363
Query: 337 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD------SFYF 390
++A SAL M E K+AI R V ++ + V + L P + E NI S
Sbjct: 364 SDSMAFSALVDVMLENRKIAIARYVSKKDSE-VNMCALCPVLIEHSNIDSEKKVVKSLTL 422
Query: 391 NVLPFAEDVREFQFPSF 407
LPFAED R FP
Sbjct: 423 CRLPFAEDERVTDFPKL 439
>gi|340505600|gb|EGR31916.1| ku70 ku80 beta-barrel domain protein [Ichthyophthirius multifiliis]
Length = 302
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 62/125 (49%), Gaps = 3/125 (2%)
Query: 171 NDNLLNIFSKKSSAKTLFVDSTTSL--RGARKTRDISPVTIFRGDLELSEKMKIKVWVYK 228
N LL ++ ++ F S+ +L + +++ +P +RG E+S +K + +Y
Sbjct: 152 NQKLLLAIKREIPSQVQFYPSSIALLIQKQFRSKGYAPRVKYRGTFEISNFLKFDIQMYT 211
Query: 229 KTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPS-KVVPPEQRIKGYRYGPQV 287
KT E+K P LK+YS + ++ + EDP+ + V E K Y YG Q+
Sbjct: 212 KTSEDKLPGLKQYSQTVEFDKNEKSGLIEKEVLRYVQEDPNMQPVDKENVGKAYHYGKQL 271
Query: 288 VPISS 292
VP+S+
Sbjct: 272 VPLSN 276
>gi|389633665|ref|XP_003714485.1| hypothetical protein MGG_01512 [Magnaporthe oryzae 70-15]
gi|351646818|gb|EHA54678.1| hypothetical protein MGG_01512 [Magnaporthe oryzae 70-15]
Length = 644
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 87/202 (43%), Gaps = 16/202 (7%)
Query: 265 VEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYM- 323
V D S+ V + K Y++G + ++ E +K ++++GF S I + +
Sbjct: 318 VSDSSRTVEKSELKKAYKFGGDYIHLTPEETAQLKDWGGHVLRIIGFKPRSMIPQWASIK 377
Query: 324 KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL---TPNVSE 380
K +F AE + +T SAL + + + +KV + V R V+V ++ P+ E
Sbjct: 378 KSTYIFPAEEDHVGSTRVFSALWKKLLKDDKVGLAWFVARVNANPVLVAIIPSKRPSDEE 437
Query: 381 KIN--IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGK 438
+P + LPFA+D+RE K P E+ +V L L P G
Sbjct: 438 SGTKFLPAGLWLCTLPFADDLRETDKRDVIKAP------EELTAKMRKVVGNLHL-PKG- 489
Query: 439 GEILQPELTPNPALERFYHHLE 460
P PNPAL+ Y L+
Sbjct: 490 --TYDPARYPNPALQWHYKILQ 509
>gi|50289869|ref|XP_447366.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526676|emb|CAG60303.1| unnamed protein product [Candida glabrata]
Length = 606
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 85/192 (44%), Gaps = 27/192 (14%)
Query: 305 SVKLLGFTDASNILRHYYMKDVNLFIAEPGN--SRATVAVSALARAMKEMNKVAIVRCVW 362
S+ ++GF + N L Y D LFI N + A ++L R +K++ KV +V W
Sbjct: 371 SLTVIGFLNEDNSLVFYNNIDKTLFITPDENVIEGSFTAFASLFRTLKKLKKVGVV---W 427
Query: 363 --RQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVS--WQPNE 418
+ S + +L P+ + N FY +PF +++R ++P+ S ++ W+ +
Sbjct: 428 GSTKSNSSPSLYLLWPSKDDDNN--QGFYLTKVPFIDEIR--KYPTLSNININEEWEEYK 483
Query: 419 QQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHL-------ELKSEHQDAAPP 471
+E ++ +L E + NPAL R Y L E+ + D
Sbjct: 484 NVKELTQGIISHFNLKSGYHAEEFR-----NPALNRHYKLLHDYLLQVEIPQDDNDIRDR 538
Query: 472 PL--DDSLKKIT 481
L DD+L KIT
Sbjct: 539 YLREDDTLLKIT 550
>gi|48995221|gb|AAT48365.1| Ku70-like protein [Vigna radiata]
Length = 629
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 95/217 (43%), Gaps = 20/217 (9%)
Query: 265 VEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMK 324
VE+P+K P Y Q + S + +K + LLGF S + +Y +K
Sbjct: 323 VENPTKQFLP--------YKSQNIIFSMEQLSEIKRISTGQLNLLGFKPLSCLRDYYNLK 374
Query: 325 DVN-LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN 383
+ L+ + G + AL R+M E+N+ A+ Q V + +
Sbjct: 375 PSSFLYPSHEGTDSSMCIFIALHRSMIELNRFAVAFSGSSSRPQLVALIAQEEVIQSGSQ 434
Query: 384 I-PDSFYFNVLPFAEDVR--EFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGE 440
I P + LP+++D+R E ++ S V+ ++Q + AAD L+K +DL +
Sbjct: 435 IEPPGMHMIYLPYSDDIRLVEERYSDTSGM-VTKASSDQIKRAAD-LIKRVDLKDFSVCQ 492
Query: 441 ILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSL 477
I NPAL+R Y L+ + +D P D++L
Sbjct: 493 I------SNPALQRHYAVLQALALEEDDVPEMKDETL 523
>gi|295657472|ref|XP_002789304.1| ATP-dependent DNA helicase 2 subunit 1 [Paracoccidioides sp.
'lutzii' Pb01]
gi|226283934|gb|EEH39500.1| ATP-dependent DNA helicase 2 subunit 1 [Paracoccidioides sp.
'lutzii' Pb01]
Length = 573
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 97/213 (45%), Gaps = 19/213 (8%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSR 337
K Y++G + + + E +++ + +++++GF S++ MK ++ +E G
Sbjct: 342 KAYKFGGEQISFTLDEQASLRNFGDPTIRIIGFKPISSLPIWASMKHPTFIYPSEEGYVG 401
Query: 338 ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN------IPDSFYFN 391
+T SAL + + + K+A+V V R+ V+ ++ K+N IP +
Sbjct: 402 STRVFSALYQTLLKKRKLALVWFVPRKNAAPVMAAMIPGKT--KLNEDGEQMIPQGMWIL 459
Query: 392 VLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPA 451
LPFA+D+R++ + P E D + ++ L K + P+ PNP+
Sbjct: 460 PLPFADDIRQYPETNLIIAP---------DELVDKMRTVVQLLQLPKAQ-YDPQKYPNPS 509
Query: 452 LERFYHHLELKSEHQDAAPPPLDDSLKKITEPD 484
L+ Y L+ + +D P D ++ K + D
Sbjct: 510 LQWHYRILQALALDEDLPEKPEDKTIPKYRQID 542
>gi|326430343|gb|EGD75913.1| hypothetical protein PTSG_00622 [Salpingoeca sp. ATCC 50818]
Length = 575
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 99/473 (20%), Positives = 186/473 (39%), Gaps = 72/473 (15%)
Query: 33 IQKKLIYGKNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQG 92
++ K++ VG++ F TE + + EHV +LQD+ V +Q L+ + G
Sbjct: 30 LRNKIVCSDKDLVGIVFFSTEHRKGD-----SDPEHVYILQDLDVPSAEQIQLLESIADG 84
Query: 93 ---------------------TCAGDYMLIKKYGETYKGKKHLCLITDALCPLKDPDVGT 131
C + ++ ET K + L T+ P D
Sbjct: 85 EYDFSEHIGSSDRYSLNDALWACGNLFSNVRTKVET----KRILLFTNVDNPHSTDDDLR 140
Query: 132 KEDQVSTIARQMVAFGLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDS 191
+ Q+ T AR + G+ + +++ +S + + +M ++N + + + +S
Sbjct: 141 R--QLETKARDLTDLGIEI-DLMHMSSDAAKFNMDAFYRP-LVVNADDEPEAQVSQGFES 196
Query: 192 TTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPST--D 249
+ + + + +TI ++S+ I + VY G + KA T D
Sbjct: 197 LLARVRCKAQKKRARMTI---PWQISDDFFISIKVYNLVGS---------ATKASYTWLD 244
Query: 250 KFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLL 309
EV + E S ++ + + + YG + + E + ++ + LL
Sbjct: 245 GRDNEEVTSKTRFFCSETSSPLLSTDMKY-SFTYGGEKIVFDKTEVDQMRTFGSPGLLLL 303
Query: 310 GFTDASNILRHYYMKDVNLFIAEP----GNSRATVAVSALARAMKEMNKVAIVRCVWRQG 365
GF S + + Y +K + + G++R A L R ++ +++V I R + R
Sbjct: 304 GFKPRSALHKEYNVKKSSFIYPDESLVGGSTRVFAAF--LDRCLR-LDRVPICRLIPRAN 360
Query: 366 QQSVVVGVL--TPNVSEKIN--IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQ 421
V +L V E N +P F+ LPFAED+R + K P +P E+Q
Sbjct: 361 SPPEFVALLPQEERVDEDGNQVVPPGFHIITLPFAEDMRSLK---KKKGP---EPTEEQV 414
Query: 422 EAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLD 474
A L+K ++ E NP+L++ Y LE + ++D P D
Sbjct: 415 GAMKKLIKSMNFTG------FSSEKFENPSLQKHYSVLEALALNRDITEDPPD 461
>gi|294874809|ref|XP_002767109.1| ku p70 dna helicase, putative [Perkinsus marinus ATCC 50983]
gi|239868537|gb|EEQ99826.1| ku p70 dna helicase, putative [Perkinsus marinus ATCC 50983]
Length = 675
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 80/190 (42%), Gaps = 19/190 (10%)
Query: 290 ISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAM 349
+ S E + FK + +K + + H Y L+ E + + V AL M
Sbjct: 413 VISGSLEVIGFKSRRKLKF------QHRIGHGYF----LYPHEGRITGSKRLVEALCCRM 462
Query: 350 KEMNKVAIVRCVWRQGQQSVVVGVLTPNV-SEKINIPDSFYFNVLPFAEDVREFQFPSFS 408
+ KVA VR V R Q + G L+P + E LPFA+D+R + P S
Sbjct: 463 AKREKVAFVRFVARANAQPIF-GALSPQMPDEASQTSGGLVLLPLPFADDIRSLELPGTS 521
Query: 409 KFPVSWQPNEQQQ-EAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQD 467
V Q ++QQ EAA ++++ ++ P NP+L+ FY LE + D
Sbjct: 522 VDEVISQEEQKQQIEAAKSIIRGFRISH------WSPYSIDNPSLKLFYAGLEALALGGD 575
Query: 468 AAPPPLDDSL 477
A + D L
Sbjct: 576 LARDAVQDLL 585
>gi|406861114|gb|EKD14170.1| putative ATP-dependent DNA helicase II subunit 1 [Marssonina
brunnea f. sp. 'multigermtubi' MB_m1]
Length = 657
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 91/206 (44%), Gaps = 25/206 (12%)
Query: 267 DPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI-LRHYYMKD 325
D S+ + + K YR+G V ++ E +KF ++++GF S + + K
Sbjct: 327 DTSRRIESSEIKKAYRFGGTQVLFTAEEQLKIKFFESPVLRIIGFKPQSMLPIWASVQKA 386
Query: 326 VNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN-- 383
++ +E G + +T +AL + + + + + + R+ + ++V +L +E+I+
Sbjct: 387 TFIYPSEDGYTGSTRTFAALWQKLLKDKIMGLAWFIARKNAKPLIVAILPS--AERIDET 444
Query: 384 -----IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNL---VKMLDLAP 435
+P + LPFA+D+RE P +P + D + VK L L
Sbjct: 445 TGAQVVPQGLWLYPLPFADDIRE--------NPTKAKPFDAPDNLVDEMRKVVKQLQLPK 496
Query: 436 SGKGEILQPELTPNPALERFYHHLEL 461
+ I P NP L+ FY L++
Sbjct: 497 A----IYDPTKYSNPQLQTFYKWLQI 518
>gi|40889723|pdb|1RW2|A Chain A, Three-Dimensional Structure Of Ku80 Ctd
Length = 152
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/128 (21%), Positives = 68/128 (53%), Gaps = 9/128 (7%)
Query: 550 TVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLE---NSNEGINYPKAVEL 606
+V +G + P ++F ++ ++ + E+ N++ +E ++NE + K+++
Sbjct: 27 SVTSVGSVNPAENFRVLVKQKKA------SFEEASNQLINHIEQFLDTNETPYFMKSIDC 80
Query: 607 LVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKKLSLISKSEAVDSDITD 666
+ A R+ I E ++FN+ L+ + + + + F++ ++ ++LI+K EA S +T
Sbjct: 81 IRAFREEAIKFSEEQRFNNFLKALQEKVEIKQLNHFWEIVVQDGITLITKEEASGSSVTA 140
Query: 667 DEAGSFIV 674
+EA F+
Sbjct: 141 EEAKKFLA 148
>gi|254749400|dbj|BAH86596.1| putative Ku70 protein [Magnaporthe grisea]
gi|440476434|gb|ELQ45031.1| hypothetical protein OOU_Y34scaffold00022g19 [Magnaporthe oryzae
Y34]
gi|440489081|gb|ELQ68761.1| hypothetical protein OOW_P131scaffold00219g18 [Magnaporthe oryzae
P131]
Length = 625
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 87/202 (43%), Gaps = 16/202 (7%)
Query: 265 VEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYM- 323
V D S+ V + K Y++G + ++ E +K ++++GF S I + +
Sbjct: 299 VSDSSRTVEKSELKKAYKFGGDYIHLTPEETAQLKDWGGHVLRIIGFKPRSMIPQWASIK 358
Query: 324 KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL---TPNVSE 380
K +F AE + +T SAL + + + +KV + V R V+V ++ P+ E
Sbjct: 359 KSTYIFPAEEDHVGSTRVFSALWKKLLKDDKVGLAWFVARVNANPVLVAIIPSKRPSDEE 418
Query: 381 KIN--IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGK 438
+P + LPFA+D+RE K P E+ +V L L P G
Sbjct: 419 SGTKFLPAGLWLCTLPFADDLRETDKRDVIKAP------EELTAKMRKVVGNLHL-PKG- 470
Query: 439 GEILQPELTPNPALERFYHHLE 460
P PNPAL+ Y L+
Sbjct: 471 --TYDPARYPNPALQWHYKILQ 490
>gi|433654363|ref|YP_007298071.1| Ku protein [Thermoanaerobacterium thermosaccharolyticum M0795]
gi|433292552|gb|AGB18374.1| Ku protein [Thermoanaerobacterium thermosaccharolyticum M0795]
Length = 269
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 61/123 (49%), Gaps = 7/123 (5%)
Query: 269 SKVVPPEQRIKGYRYGP-QVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN 327
+K VP E+ ++GY Y P + V I + E + K++ ++ FTD S I Y+ D
Sbjct: 52 NKEVPDEEIVRGYEYEPGKFVIIDEEDLERIPKSTVKTIDIIDFTDLSQIDPIYF--DKT 109
Query: 328 LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPN--VSEKINIP 385
+IA P A V L +MK++N+VA+ R V R Q + V N V E ++ P
Sbjct: 110 YYIA-PDEIGAKPYV-LLRDSMKKLNRVAVARVVIRSKQDLACIRVYNDNYMVLETMHFP 167
Query: 386 DSF 388
D
Sbjct: 168 DEI 170
>gi|167522283|ref|XP_001745479.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775828|gb|EDQ89450.1| predicted protein [Monosiga brevicollis MX1]
Length = 1236
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 125/308 (40%), Gaps = 55/308 (17%)
Query: 188 FVDSTTSLRGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPS 247
+D TTS ++ R P L+L+E M I V VY + T KYS
Sbjct: 878 LLDRTTSRVQKKRARMTIP-------LQLAEGMAIGVKVYNLVSQ---ATKGKYSYVYND 927
Query: 248 TDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVK 307
T T K Y ++ +P ++P + + G ++G ++ S E +K + ++
Sbjct: 928 TQPVVT---KTAYYCENTTNP--LLPTDMKY-GAKFGNEMAVFSKEEVTQIKSFGQPGLR 981
Query: 308 LLGFTDASNILRHYYMKDVNLFIAE--PGNSRATVAVSALARAMKEMNKVAIVRCVWRQG 365
LLGF D + + +++K + G SR + K+AI V R G
Sbjct: 982 LLGFKDQAALKPWHHVKKSCFLYPDDKAGGSRCL-----------RLRKLAICLFVSRAG 1030
Query: 366 QQSVVVGVL------TPNVSEKINIPDSFYFNVLPFAEDVRE----FQFPSFSKFPVSWQ 415
+V +L + E+++ P F+ LP+AED+RE F P
Sbjct: 1031 VPPNMVALLPQAEKVAEDSHEQVS-PPGFHVIFLPYAEDLREVNVDFDLP---------H 1080
Query: 416 PNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDD 475
+ Q +AA LV+ L + Q NP+L+ ++ LE + + ++D
Sbjct: 1081 ADADQIKAATGLVRSL------THKHFQWHGVRNPSLQVHFNALEALALSRSKVEESVND 1134
Query: 476 SLKKITEP 483
+ I EP
Sbjct: 1135 LVPSIPEP 1142
>gi|302306501|ref|NP_982917.3| ABL030Wp [Ashbya gossypii ATCC 10895]
gi|299788546|gb|AAS50741.3| ABL030Wp [Ashbya gossypii ATCC 10895]
gi|374106120|gb|AEY95030.1| FABL030Wp [Ashbya gossypii FDAG1]
Length = 602
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 60/150 (40%), Gaps = 12/150 (8%)
Query: 272 VPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIA 331
VP E K YRYG V + + + + GF D +LRH+ + +A
Sbjct: 286 VPKEHVTKAYRYGADYVVLPELLEHERLYTTTPGLDIRGFIDTGKVLRHHLCSESVYIMA 345
Query: 332 EP--GNSRATVAVSALARAMKEMNKVAIVRCVWRQG---QQSVVVGVLTPNVSEKINIPD 386
+ G + V +AL AM K AI R V ++ Q ++ +L ++K D
Sbjct: 346 DSREGTAADYVTFAALVDAMIAAEKFAIARYVQKKDSEVQMCLLCPLLVEPSTKKRPADD 405
Query: 387 -------SFYFNVLPFAEDVREFQFPSFSK 409
+ LPFAED R FP K
Sbjct: 406 DAAEAKRALVLCRLPFAEDERSSDFPPLVK 435
>gi|345560253|gb|EGX43378.1| hypothetical protein AOL_s00215g114 [Arthrobotrys oligospora ATCC
24927]
Length = 644
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 93/196 (47%), Gaps = 18/196 (9%)
Query: 266 EDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKD 325
E+ ++ V P+Q K Y++G + V S E++ ++ + +++LGF + + + M+
Sbjct: 332 EETAQEVTPDQIRKAYKFGGETVSFSDEEFKKIRNFGDPVLRILGFKPQTELQFWHNMRS 391
Query: 326 VN-LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINI 384
++ +E + +T +AL + + + I + R+ V+ ++ SE+
Sbjct: 392 STFIYPSEEDYTGSTRTFAALRNKLLKDKLMGIAWFIARRNAAPVMAAIIP---SEE--- 445
Query: 385 PDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQP 444
P + LPF +D+R Q P + P PN D +++ L + KG I P
Sbjct: 446 PQGMFIIPLPFVDDIR--QNP---EVPHVVAPNYLIDRMQD-IIRQLHMP---KGYI--P 494
Query: 445 ELTPNPALERFYHHLE 460
E PNPAL++ Y LE
Sbjct: 495 EKYPNPALQKHYKVLE 510
>gi|340504921|gb|EGR31314.1| ku p70 DNA helicase, putative [Ichthyophthirius multifiliis]
Length = 542
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 101/226 (44%), Gaps = 24/226 (10%)
Query: 270 KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI-LRHYYMKDVNL 328
+++ P Q + G + V ISS + + +K E S+ L+GF S + + H Y +
Sbjct: 309 QILYPNQISQCIILGGEKVRISSKDVQKMKHFQEPSMTLIGFKPLSQLKVYHNYRPSYFV 368
Query: 329 FIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVS---EKINIP 385
+ + ++ AL MK NK+AIVR ++G Q +L + + + P
Sbjct: 369 YPDDFQVKGSSQFFHALITQMKAKNKIAIVRFQPKRGSQVRFCALLPQEEAYDEDHVQQP 428
Query: 386 DSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPE 445
FY LP+++D+R+ +E++ E +NL+ + + EI +
Sbjct: 429 PGFYLISLPYSDDMRDL---------TKVVQHEEKVEVNNNLINCAKMICNAL-EIHNFD 478
Query: 446 LT--PNPALERFYHHLELKS-------EHQDAAPPPLDDSLKKITE 482
+ +P L++FY HL+ + E QD P ++ +KK E
Sbjct: 479 VRNFEDPGLQKFYAHLQAHALNEISPEETQDLITPD-EEGMKKYEE 523
>gi|323307743|gb|EGA61006.1| Yku80p [Saccharomyces cerevisiae FostersO]
Length = 419
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 59/137 (43%), Gaps = 9/137 (6%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 336
K YRYG V + S + ++ + L GF + + R++ + + A+ G
Sbjct: 210 KAYRYGADYVVLPSVLVDQTVYESFPGLDLRGFLNREALPRYFLTSESSFITADTRLGCQ 269
Query: 337 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD------SFYF 390
+A SAL M E K+A+ R V ++ + V + L P + E NI S
Sbjct: 270 SDLMAFSALVDVMLENRKIAVARYVSKKDSE-VNMCALCPVLIEHSNINSEKKFVKSLTL 328
Query: 391 NVLPFAEDVREFQFPSF 407
LPFAED R FP
Sbjct: 329 CRLPFAEDERVTDFPKL 345
>gi|322695392|gb|EFY87201.1| ku70 protein [Metarhizium acridum CQMa 102]
Length = 645
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 91/202 (45%), Gaps = 15/202 (7%)
Query: 265 VEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI-LRHYYM 323
ED ++ V + K Y++G + V + E ++++ ++++GF + +
Sbjct: 322 AEDSTRTVEKGEMKKAYKFGGEYVYFTPDEQKSLRDFGPPVIRIIGFKPRKLLPIWASVK 381
Query: 324 KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL-----TPNV 378
K +F +E +T +AL + + + NK+ I C+ R Q ++ ++ + +
Sbjct: 382 KSTFIFPSEEDFVGSTRVFTALWQKLIKDNKIGIAWCIVRSNSQPILAAIVPSRERSDDK 441
Query: 379 SEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGK 438
S +P + LPFA+D+RE + P Q +++ + +V+ L L +
Sbjct: 442 SGTPYLPAGLWIYPLPFADDLREIKPPDGVM-----QSSDELKTQMRTIVQQLQLPKA-- 494
Query: 439 GEILQPELTPNPALERFYHHLE 460
+ P PNPAL+ Y L+
Sbjct: 495 --MYNPLKYPNPALQWHYKILK 514
>gi|323347187|gb|EGA81462.1| Yku80p [Saccharomyces cerevisiae Lalvin QA23]
Length = 524
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 59/137 (43%), Gaps = 9/137 (6%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 336
K YRYG V + S + ++ + L GF + + R++ + + A+ G
Sbjct: 210 KAYRYGADYVVLPSVLVDQTVYESFPGLDLRGFLNREALPRYFLTSESSFITADTRLGCQ 269
Query: 337 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD------SFYF 390
+A SAL M E K+A+ R V ++ + V + L P + E NI S
Sbjct: 270 SDLMAFSALVDVMLENRKIAVARYVSKKDSE-VNMCALCPVLIEHSNINSEKKFVKSLTL 328
Query: 391 NVLPFAEDVREFQFPSF 407
LPFAED R FP
Sbjct: 329 CRLPFAEDERVTDFPKL 345
>gi|323336300|gb|EGA77571.1| Yku80p [Saccharomyces cerevisiae Vin13]
Length = 629
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 59/137 (43%), Gaps = 9/137 (6%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 336
K YRYG V + S + ++ + L GF + + R++ + + A+ G
Sbjct: 315 KAYRYGADYVVLPSVLVDQTVYESFPGLDLRGFLNREALPRYFLTSESSFITADTRLGCQ 374
Query: 337 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD------SFYF 390
+A SAL M E K+A+ R V ++ + V + L P + E NI S
Sbjct: 375 SDLMAFSALVDVMLENRKIAVARYVSKKDSE-VNMCALCPVLIEHSNINSEKKFVKSLTL 433
Query: 391 NVLPFAEDVREFQFPSF 407
LPFAED R FP
Sbjct: 434 CRLPFAEDERVTDFPKL 450
>gi|112362671|emb|CAL35976.1| HDF2 protein [Saccharomyces cerevisiae]
Length = 629
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 59/137 (43%), Gaps = 9/137 (6%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 336
K YRYG V + S + ++ + L GF + + R++ + + A+ G
Sbjct: 315 KAYRYGADYVVLPSVLVDQTVYESFPGLDLRGFLNREALPRYFLTSESSFITADTRLGCQ 374
Query: 337 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD------SFYF 390
+A SAL M E K+A+ R V ++ + V + L P + E NI S
Sbjct: 375 SDLMAFSALVDVMLENRKIAVARYVSKKDSE-VNMCALCPVLIEHSNINSEKKFVKSLTL 433
Query: 391 NVLPFAEDVREFQFPSF 407
LPFAED R FP
Sbjct: 434 CRLPFAEDERVTDFPKL 450
>gi|198423929|ref|XP_002123200.1| PREDICTED: similar to predicted protein, partial [Ciona
intestinalis]
Length = 233
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 69/148 (46%), Gaps = 24/148 (16%)
Query: 343 SALARAMKEMNKVAIVRCVWRQGQQSVVVGVL------TPNVSEKINIPDSFYFNVLPFA 396
+AL + + + VAI R V R + +L P SE+I P F+ LPFA
Sbjct: 6 TALLQKCLDKDYVAICRFVPRTSASMRNIALLPQREEIDPETSEQIK-PSGFFIVYLPFA 64
Query: 397 EDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFY 456
+DVRE + P P+E+Q ++A+++++ L P NPAL+ Y
Sbjct: 65 DDVRETELPE-----EQPSPSEEQVQSAESIIRKLRFK-------YDPNSFDNPALQTHY 112
Query: 457 HHLELKSEHQDAAPPPLDDSLKKITEPD 484
+LE + ++ AP P+ D T PD
Sbjct: 113 KNLEAMALEKE-APDPVTDH----TAPD 135
>gi|112362655|emb|CAL35984.1| HDF2 protein [Saccharomyces cerevisiae]
Length = 629
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 59/137 (43%), Gaps = 9/137 (6%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 336
K YRYG V + S + ++ + L GF + + R++ + + A+ G
Sbjct: 315 KAYRYGADYVVLPSVLVDQTVYESFPGLDLRGFLNREALPRYFLTSESSFITADTRLGCQ 374
Query: 337 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD------SFYF 390
+A SAL M E K+A+ R V ++ + V + L P + E NI S
Sbjct: 375 SDLMAFSALVDVMLENRKIAVARYVSKKDSE-VNMCALCPVLIEHSNINSEKKFVKSLTL 433
Query: 391 NVLPFAEDVREFQFPSF 407
LPFAED R FP
Sbjct: 434 CRLPFAEDERVTDFPKL 450
>gi|392297267|gb|EIW08367.1| Yku80p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 629
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 59/137 (43%), Gaps = 9/137 (6%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 336
K YRYG V + S + ++ + L GF + + R++ + + A+ G
Sbjct: 315 KAYRYGADYVVLPSVLVDQTVYESFPGLDLRGFLNREALPRYFLTSESSFITADTRLGCQ 374
Query: 337 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD------SFYF 390
+A SAL M E K+A+ R V ++ + V + L P + E NI S
Sbjct: 375 SDLMAFSALVDVMLENRKIAVARYVSKKDSE-VNMCALCPVLIEHSNINSEKKFVKSLTL 433
Query: 391 NVLPFAEDVREFQFPSF 407
LPFAED R FP
Sbjct: 434 CRLPFAEDERVTDFPKL 450
>gi|256269984|gb|EEU05234.1| Yku80p [Saccharomyces cerevisiae JAY291]
Length = 629
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 59/137 (43%), Gaps = 9/137 (6%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 336
K YRYG V + S + ++ + L GF + + R++ + + A+ G
Sbjct: 315 KAYRYGADYVVLPSVLVDQTVYESFPGLDLRGFLNREALPRYFLTSESSFITADTRLGCQ 374
Query: 337 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD------SFYF 390
+A SAL M E K+A+ R V ++ + V + L P + E NI S
Sbjct: 375 SDLMAFSALVDVMLENRKIAVARYVSKKDSE-VNMCALCPVLIEHSNINSEKKFVKSLTL 433
Query: 391 NVLPFAEDVREFQFPSF 407
LPFAED R FP
Sbjct: 434 CRLPFAEDERVTDFPKL 450
>gi|6323753|ref|NP_013824.1| Yku80p [Saccharomyces cerevisiae S288c]
gi|2498435|sp|Q04437.1|KU80_YEAST RecName: Full=ATP-dependent DNA helicase II subunit 2; AltName:
Full=ATP-dependent DNA helicase II subunit Ku80;
AltName: Full=High affinity DNA-binding factor subunit
2; AltName: Full=Yeast Ku80
gi|817864|emb|CAA89742.1| unknown [Saccharomyces cerevisiae]
gi|112362659|emb|CAL35982.1| HDF2 protein [Saccharomyces cerevisiae]
gi|112362663|emb|CAL35980.1| HDF2 protein [Saccharomyces cerevisiae]
gi|112362665|emb|CAL35979.1| HDF2 protein [Saccharomyces cerevisiae]
gi|112362667|emb|CAL35978.1| HDF2 protein [Saccharomyces cerevisiae]
gi|112362669|emb|CAL35977.1| HDF2 protein [Saccharomyces cerevisiae]
gi|112362673|emb|CAL35975.1| HDF2 protein [Saccharomyces cerevisiae]
gi|112362675|emb|CAL35974.1| HDF2 protein [Saccharomyces cerevisiae]
gi|112362679|emb|CAL35972.1| HDF2 protein [Saccharomyces cerevisiae]
gi|190408335|gb|EDV11600.1| yeast Ku80 protein [Saccharomyces cerevisiae RM11-1a]
gi|259148680|emb|CAY81925.1| Yku80p [Saccharomyces cerevisiae EC1118]
gi|285814108|tpg|DAA10003.1| TPA: Yku80p [Saccharomyces cerevisiae S288c]
gi|323332067|gb|EGA73478.1| Yku80p [Saccharomyces cerevisiae AWRI796]
gi|323353081|gb|EGA85381.1| Yku80p [Saccharomyces cerevisiae VL3]
Length = 629
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 59/137 (43%), Gaps = 9/137 (6%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 336
K YRYG V + S + ++ + L GF + + R++ + + A+ G
Sbjct: 315 KAYRYGADYVVLPSVLVDQTVYESFPGLDLRGFLNREALPRYFLTSESSFITADTRLGCQ 374
Query: 337 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD------SFYF 390
+A SAL M E K+A+ R V ++ + V + L P + E NI S
Sbjct: 375 SDLMAFSALVDVMLENRKIAVARYVSKKDSE-VNMCALCPVLIEHSNINSEKKFVKSLTL 433
Query: 391 NVLPFAEDVREFQFPSF 407
LPFAED R FP
Sbjct: 434 CRLPFAEDERVTDFPKL 450
>gi|365763827|gb|EHN05353.1| Yku80p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 629
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 59/137 (43%), Gaps = 9/137 (6%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 336
K YRYG V + S + ++ + L GF + + R++ + + A+ G
Sbjct: 315 KAYRYGADYVVLPSVLVDQTVYESFPGLDLRGFLNREALPRYFLTSESSFITADTRLGCQ 374
Query: 337 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD------SFYF 390
+A SAL M E K+A+ R V ++ + V + L P + E NI S
Sbjct: 375 SDLMAFSALVDVMLENRKIAVARYVSKKDSE-VNMCALCPVLIEHSNINSEKKFVKSLTM 433
Query: 391 NVLPFAEDVREFQFPSF 407
LPFAED R FP
Sbjct: 434 CRLPFAEDERVTDFPKL 450
>gi|207342324|gb|EDZ70116.1| YMR106Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 523
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 59/135 (43%), Gaps = 9/135 (6%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 336
K YRYG V + S + ++ + L GF + + R++ + + A+ G
Sbjct: 315 KAYRYGADYVVLPSVLVDQTVYESFPGLDLRGFLNREALPRYFLTSESSFITADTRLGCQ 374
Query: 337 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD------SFYF 390
+A SAL M E K+A+ R V ++ + V + L P + E NI S
Sbjct: 375 SDLMAFSALVDVMLENRKIAVARYVSKKDSE-VNMCALCPVLIEHSNINSEKKFVKSLTL 433
Query: 391 NVLPFAEDVREFQFP 405
LPFAED R FP
Sbjct: 434 CRLPFAEDERVTDFP 448
>gi|374708956|ref|ZP_09713390.1| hypothetical protein SinuC_01957 [Sporolactobacillus inulinus CASD]
Length = 273
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 4/95 (4%)
Query: 278 IKGYRYGP-QVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNS 336
+KGY Y P Q VPIS E +++ + +K V+++ F S I YY K + FI P +
Sbjct: 61 VKGYEYAPGQFVPISEEELSSLQDETDKHVEIINFVKLSEIDPIYYEK--SYFIG-PDSG 117
Query: 337 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVV 371
A S L +A+++ +K+AI + R Q +
Sbjct: 118 NGLRAFSLLRQAIQDSDKIAIANIIIRSKQHLAAI 152
>gi|112362697|emb|CAL35963.1| HDF2 protein [Saccharomyces paradoxus]
Length = 589
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 60/135 (44%), Gaps = 9/135 (6%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 336
K YRYG V + S + ++ + L GF D + R++ + + A+ G
Sbjct: 308 KAYRYGADYVVLPSILVDQTVYESFPGLDLRGFLDREALPRYFLTSESSFITADTRLGCL 367
Query: 337 RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTP------NVSEKINIPDSFYF 390
++A SAL M E K+A+ R V ++ + V + L P N++ + S
Sbjct: 368 SDSMAFSALVDVMLENRKIAVARYVSKKDSE-VNMCALCPVLIGHSNINSEKKFVKSLTL 426
Query: 391 NVLPFAEDVREFQFP 405
LPFAED R FP
Sbjct: 427 CRLPFAEDERVTDFP 441
>gi|442570192|sp|Q1DU75.2|KU70_COCIM RecName: Full=ATP-dependent DNA helicase II subunit 1; AltName:
Full=ATP-dependent DNA helicase II subunit Ku70
gi|392865133|gb|EAS30893.2| ATP-dependent DNA helicase II subunit 1 [Coccidioides immitis RS]
Length = 647
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 113/251 (45%), Gaps = 31/251 (12%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSR 337
K Y++G + V + E A++ + ++++GF S++ K ++ +E G
Sbjct: 340 KAYKFGGEHVAFTQEEQSALRNFGDPVIRIIGFKPMSSLPIWASTKHSTFIYPSEAGFVG 399
Query: 338 ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN------IPDSFYFN 391
+T SAL + + + K A+V V R+ + V+ L P EK++ IP +
Sbjct: 400 STRVFSALQQTLLKQKKFALVWFVARK-NAAPVMAALIPG-EEKLDDNDAQVIPPGMWIQ 457
Query: 392 VLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPA 451
LPFA+D+R Q P V+ +P + ++++L L P G+ P+ PNP+
Sbjct: 458 PLPFADDIR--QNPETHNI-VAPEPLIDKMR---EIIQVLQL-PKGR---YDPQRYPNPS 507
Query: 452 LERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLK 511
L+ Y L+ + LD+ L E D T+ Q ID G+ V++ +L+
Sbjct: 508 LQWHYRILQALA---------LDEDLPDQAE-DKTIPKYKQ--IDKRAGEHVLEWGEELE 555
Query: 512 KSTRRFLREKP 522
R KP
Sbjct: 556 TQNRLLENSKP 566
>gi|19075945|ref|NP_588445.1| Ku domain protein Pku70 [Schizosaccharomyces pombe 972h-]
gi|74582874|sp|O94395.1|KU70_SCHPO RecName: Full=ATP-dependent DNA helicase II subunit 1; AltName:
Full=ATP-dependent DNA helicase II subunit Ku70
gi|4008550|emb|CAA22471.1| Ku domain protein Pku70 [Schizosaccharomyces pombe]
Length = 607
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 101/532 (18%), Positives = 209/532 (39%), Gaps = 102/532 (19%)
Query: 1 MARTREALLLLLDVSPSMHSVLPD-------VEKLCS-RLIQKKLIYGKNHEVGVILFGT 52
A + A+L +++VSPSM + + + +C+ +L +++I + +GV+L+GT
Sbjct: 13 FAIGKYAILFVIEVSPSMLDPVDEFTPSSLQMALICAYQLAAQRVITNPSDIMGVLLYGT 72
Query: 53 EETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQG-----------TCAGDY--- 98
E + G + + +L DI D ++SL+ + +C
Sbjct: 73 ESS-------TGRFANQMMLLDIDPPDAERIKSLQSFEKDFQFSKEKFKPCSCQVSLSSV 125
Query: 99 -----MLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNI 153
++ E ++ K L LITD P D T+ D + A+ + +++ +
Sbjct: 126 LYHCSVIFTTKAENFE--KRLFLITDNDHPAWD---ATERDIILQRAKDLRDLDIQVHPV 180
Query: 154 VV-------RASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISP 206
+ R ++ + ++ ++ N+ ++ + ++ T+L+ ++
Sbjct: 181 FLDPPTHSFRINIFYSDFLYIVYGRQDVSNLVNRGQAQLQHMLNMITALQKPKRAH---- 236
Query: 207 VTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVE 266
F ++L ++I G E F LK+ K ++ Y E
Sbjct: 237 ---FHLKMDLGNDVRI--------GVEAFILLKR------------LESAKTNWVYAKGE 273
Query: 267 DPSKVVPPEQRI--------------KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFT 312
+ VP +++ + Y YG V S E V+ +++++GF
Sbjct: 274 RFAVAVPQSKQVSFATKKELKKDEIRRSYSYGGSSVVFGSDELNKVRSFEPPTLRIIGFR 333
Query: 313 DASNILRHYYMKDVNLFIAEPGNSRATVAV-SALARAMKEMNKVAIVRCVWRQGQQSVVV 371
D S + + +K + + AV SA+ + + NK+ I V R V
Sbjct: 334 DFSTLKPWHCLKPAVFLRPKDDEIIGSGAVFSAIHKKLLASNKIGIAWFVSRPNANPCFV 393
Query: 372 GVL-TP---NVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNL 427
+L TP ++ + +P + LP A+D+R P + P+S N E +
Sbjct: 394 AMLATPGSIHIRDDFELPLGIFLVQLPTADDIRS--LPPINPNPISMPSN--LIETMQRI 449
Query: 428 VKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKK 479
++ ++L QP NP+L+ Y L+ + ++ +D++L K
Sbjct: 450 LRGMELRS------YQPGKYNNPSLQWHYKVLQALALDEEIPTDFVDNTLPK 495
>gi|119182187|ref|XP_001242242.1| hypothetical protein CIMG_06138 [Coccidioides immitis RS]
Length = 613
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 113/251 (45%), Gaps = 31/251 (12%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSR 337
K Y++G + V + E A++ + ++++GF S++ K ++ +E G
Sbjct: 340 KAYKFGGEHVAFTQEEQSALRNFGDPVIRIIGFKPMSSLPIWASTKHSTFIYPSEAGFVG 399
Query: 338 ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN------IPDSFYFN 391
+T SAL + + + K A+V V R+ + V+ L P EK++ IP +
Sbjct: 400 STRVFSALQQTLLKQKKFALVWFVARK-NAAPVMAALIPG-EEKLDDNDAQVIPPGMWIQ 457
Query: 392 VLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPA 451
LPFA+D+R Q P V+ +P + ++++L L P G+ P+ PNP+
Sbjct: 458 PLPFADDIR--QNPETHNI-VAPEPLIDKMR---EIIQVLQL-PKGR---YDPQRYPNPS 507
Query: 452 LERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLK 511
L+ Y L+ + LD+ L E D T+ Q ID G+ V++ +L+
Sbjct: 508 LQWHYRILQALA---------LDEDLPDQAE-DKTIPKYKQ--IDKRAGEHVLEWGEELE 555
Query: 512 KSTRRFLREKP 522
R KP
Sbjct: 556 TQNRLLENSKP 566
>gi|366991251|ref|XP_003675391.1| hypothetical protein NCAS_0C00320 [Naumovozyma castellii CBS 4309]
gi|342301256|emb|CCC69022.1| hypothetical protein NCAS_0C00320 [Naumovozyma castellii CBS 4309]
Length = 608
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 102/243 (41%), Gaps = 32/243 (13%)
Query: 272 VPPEQRIKGYRYGPQVVPISSAEWEAVK---FKPEKSVKLLGFTDASNILRHYYMKDVNL 328
+ P++ K + YG Q + ++ E + K E +K++GF N +R++ D L
Sbjct: 332 IKPDELCKVFPYGDQDIELNDKEVAKINDDYSKHESFLKVIGFRSTKNSIRYFNNIDKAL 391
Query: 329 FIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQ--GQQSVVVGVLTPNVSEKINIPD 386
F+ P S+ + +A + + K VW + ++ + +L+P + I+ +
Sbjct: 392 FVV-PDESQYEGTIKTMASLFRVLKKRDKCMIVWGKVKSNSNLRLYILSPTTN--IDRNE 448
Query: 387 SFYFNVLPFAEDVREFQFPSFSKFPVSWQPNE-QQQEAADNLVKMLD--LAPSGKGEILQ 443
FY +PF +++R KFP N E NLV++ + + + +
Sbjct: 449 GFYLYRIPFLDEIR--------KFPKLLDYNHITTSEDYLNLVRITENIIGYFNLKKGYR 500
Query: 444 PELTPNPALERFYHHL-------------ELKSEHQDAAPPPLDDSLKKITEPDPTLLAE 490
P NP+L+R Y L + S+ Q + DD+L KI ++A
Sbjct: 501 PSDFKNPSLQRHYKTLHDYLLQVEQPVREDGDSDGQTSRFLKEDDTLNKILHIREKIIAS 560
Query: 491 SQS 493
+S
Sbjct: 561 KES 563
>gi|303319009|ref|XP_003069504.1| ATP-dependent DNA helicase ii, 70 kDa subunit family protein
[Coccidioides posadasii C735 delta SOWgp]
gi|240109190|gb|EER27359.1| ATP-dependent DNA helicase ii, 70 kDa subunit family protein
[Coccidioides posadasii C735 delta SOWgp]
gi|320041120|gb|EFW23053.1| hypothetical protein CPSG_00952 [Coccidioides posadasii str.
Silveira]
Length = 647
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 114/251 (45%), Gaps = 31/251 (12%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI-LRHYYMKDVNLFIAEPGNSR 337
K Y++G + + + E A++ + ++++GF S++ + + ++ +E G
Sbjct: 340 KAYKFGGEHIAFTQEEQSALRNFGDPVIRIIGFKPMSSLPIWASTKQSTFIYPSEAGFVG 399
Query: 338 ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN------IPDSFYFN 391
+T SAL + + + K A+V V R+ + V+ L P EK++ IP +
Sbjct: 400 STRVFSALQQTLLKQKKFALVWFVARKN-AAPVMAALIPG-EEKLDDNDAQVIPPGMWIQ 457
Query: 392 VLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPA 451
LPFA+D+R Q P V+ +P + ++++L L P G+ P+ PNP+
Sbjct: 458 PLPFADDIR--QNPETHNI-VAPEPLIDKMR---EIIQVLQL-PKGR---YDPQRYPNPS 507
Query: 452 LERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLK 511
L+ Y L+ + LD+ L E D T+ Q ID G+ V++ +L+
Sbjct: 508 LQWHYRILQALA---------LDEDLPDQAE-DKTIPKYKQ--IDKRAGEHVLEWGEELE 555
Query: 512 KSTRRFLREKP 522
R KP
Sbjct: 556 TQKRLLENSKP 566
>gi|212530704|ref|XP_002145509.1| DSB repair complex subunit Ku70, putative [Talaromyces marneffei
ATCC 18224]
gi|210074907|gb|EEA28994.1| DSB repair complex subunit Ku70, putative [Talaromyces marneffei
ATCC 18224]
Length = 653
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 115/575 (20%), Positives = 221/575 (38%), Gaps = 87/575 (15%)
Query: 5 REALLLLLDVSPSMHSVLPDVE-------------KLCSRLIQKKLIYGKNHEVGVILFG 51
++A+L +D+S SM V P K L+Q+++I +GV+ FG
Sbjct: 29 KDAVLFAIDISDSMLEVRPPESGKGEPQSPAKAAIKCAYHLMQQRIISNPKDMMGVLFFG 88
Query: 52 TEET----ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDYMLIKKYGET 107
TE + E+E ++ Y H + D+ V D + V+SL+ L + +L
Sbjct: 89 TEASKFYDEDENSRGGLSYPHCYLFTDLDVPDANDVKSLRALAEDDDEETEILKPSKERV 148
Query: 108 YKGKKHLC-----------LITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVR 156
C ++ L + D D ED+ A + A L +++
Sbjct: 149 SMANVLFCANQIFASKASNFLSRRLFIITDSDNPHSEDRTMRSAATVRAKDLYDLGVIIE 208
Query: 157 ASLSGEPHMRVIIEN--DNLLNIFSKKSSAKTLFVDSTTSLRGAR--------------K 200
+P D+++ + + F + T + A
Sbjct: 209 LFPISKPDHEFDRSKFYDDIVYKTAPGDPEASAFTAAGTQVPNASGDGISLLNSLLSSVN 268
Query: 201 TRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKY---SDKAPSTDKFATHEVK 257
+R + +F+ LE S KI V Y ++ P+ Y + P+ K T ++
Sbjct: 269 SRSVPRRALFKIPLEFSPNFKISVTGYLIFKRQE-PSRSCYVWLGGEKPALAKGTTTQI- 326
Query: 258 VDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI 317
+D ++ + + K Y++G + V + E ++ + ++++GF S++
Sbjct: 327 -------ADDTARTIEKTEIQKAYKFGGEQVSFTIEEQAKLRNFGDPVIRIIGFKPRSSL 379
Query: 318 LRHYYMKDVN-LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTP 376
K ++ E +T +AL + + + K+ +V + R+ V+ +L
Sbjct: 380 PIWASTKHPTFIYPNEDEFVGSTRVFAALHQKLLQDEKIGLVWFIPRKNATPVLAAMLP- 438
Query: 377 NVSEKIN------IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKM 430
EK++ +P + LPFA+D+R Q P + V+ +P +V+
Sbjct: 439 -GEEKLDDNGVQFLPPGLWILPLPFADDIR--QNPE-TNLVVAPEPLIDHMR---TVVQQ 491
Query: 431 LDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAE 490
L L + P PNP+L+ Y L+ + LD+ L + E D T+
Sbjct: 492 LQLPKAH----YDPRKYPNPSLQWHYRILQALA---------LDEELPEQAE-DKTIPKY 537
Query: 491 SQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGS 525
Q ID G +V++ +L+K + +P S
Sbjct: 538 KQ--IDKRAGDYVLEWGEELEKQYQNMYTNQPKTS 570
>gi|452822798|gb|EME29814.1| ATP-dependent DNA helicase 2 subunit 1 isoform 1 [Galdieria
sulphuraria]
Length = 593
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 90/181 (49%), Gaps = 22/181 (12%)
Query: 306 VKLLGFTDASNILRHYYMK-DVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQ 364
++L+GF + + + Y M+ L+ ++ + + ++ L + M + N++AIVR +R+
Sbjct: 312 MELIGFENKNKLKWQYNMRPSYFLYPSDHTIKGSQLLMAVLWKQMLQENQIAIVRVCFRR 371
Query: 365 GQQSVVVGVLTPNVSEKINI-----PDSFYFNVLPFAEDVR---EFQFPSFSKFPVSWQP 416
+ L P +K P F+ LPFAE++R + Q+P ++ P
Sbjct: 372 TSHPRLAA-LVPQDEKKTESHLQTEPCGFHLIWLPFAEEIRKEWKKQYPKWNNL-----P 425
Query: 417 NEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDS 476
++Q EAA N++ L + PS P +P ++R+Y+ L+ + +Q P ++D+
Sbjct: 426 SQQCVEAAMNVISKLSM-PS-----YDPSKYSDPDIQRYYNGLQALALNQTNF-PQVEDT 478
Query: 477 L 477
L
Sbjct: 479 L 479
>gi|260805378|ref|XP_002597564.1| hypothetical protein BRAFLDRAFT_281658 [Branchiostoma floridae]
gi|229282829|gb|EEN53576.1| hypothetical protein BRAFLDRAFT_281658 [Branchiostoma floridae]
Length = 613
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 108/525 (20%), Positives = 198/525 (37%), Gaps = 93/525 (17%)
Query: 5 REALLLLLDVSPSMH-------SVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETEN 57
R++L+ L+D S SM S K ++ K+I VGV+ F T + +N
Sbjct: 42 RDSLIFLIDCSASMFQEEGEEDSAFHKCVKCVHSAMRNKIISNDRDLVGVVFFATNKHKN 101
Query: 58 ELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDYMLIKKYGETYK-------- 109
++HV + QD+ V ++ L+ G +++G +
Sbjct: 102 P-----SDFKHVYIFQDLDVPGAQMILELEE--IFEEDGVERFEEEFGHSTDFSMSEVLW 154
Query: 110 -------------GKKHLCLITDALCPLKDPDVGT--KEDQVSTIARQMVAFGLRMKNIV 154
G K L L T+ DP G + Q T A+ + G+ + +
Sbjct: 155 NCSNMFSTCTQKLGHKRLLLFTNN----DDPHAGNINLQRQAKTKAKDLEGLGINTELLH 210
Query: 155 VRASLSGEPH--------MRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISP 206
+ GEP + VI E++++ + + + L S R
Sbjct: 211 MNKP-GGEPFDITKFYQDIIVIPEDEDVTCLPDPAAKFEELLERQVNSEHKKR------- 262
Query: 207 VTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVE 266
T+ R L L E ++ V +Y + E Y + D EV+ K+V+
Sbjct: 263 -TLARVPLSLGEGLEFGVGIYTQVRE-------TYKGRKVKLDARTNQEVRT--ITKTVD 312
Query: 267 -DPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKD 325
+ K + P K +G + + + E +K + + L+GF +++ +++++
Sbjct: 313 SETGKFLMPSDIKKVQTWGGRDIAFENDEIVEMKVFDKPGLVLMGFKPRTSLKPYFHIRP 372
Query: 326 VN-LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSE---- 380
LF E S +T SAL + + V I R + R+ V +L P E
Sbjct: 373 AQFLFPDESVISGSTRLFSALLQRCLARDVVPICRYIPRKNSPPKFVALL-PQKEEFDDN 431
Query: 381 -KINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKG 439
+ P F+ LPFA+D+R+ F + + + Q + A ++ L
Sbjct: 432 NMQSTPAGFHVVFLPFADDLRKLNFED------TPRAKQDQVDKAKEIINKLKFK----- 480
Query: 440 EILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPD 484
P NP +++ Y +LE + +DA + + T+PD
Sbjct: 481 --YDPMSFENPVIQQHYRNLEALALDRDAP-----EEVYDFTQPD 518
>gi|358394139|gb|EHK43540.1| hypothetical protein TRIATDRAFT_33616 [Trichoderma atroviride IMI
206040]
Length = 648
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 110/264 (41%), Gaps = 30/264 (11%)
Query: 265 VEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHY--Y 322
ED ++ V ++ K Y++G + V + E ++++ ++++GF + N++ +
Sbjct: 325 AEDSARTVEKQEIKKAYKFGGEYVYFTPEEQKSIRDYGPPVIRIIGFKN-RNLIPAWASV 383
Query: 323 MKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL-----TPN 377
K +F +E ++ SAL + + + K+ I CV R Q V+ V+ +
Sbjct: 384 KKSTFIFPSEEDYIGSSRVFSALWQKLLDSEKIGIAWCVLRSNSQPVLAAVIPSREQSDE 443
Query: 378 VSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSG 437
S +P + LP A+D+R+ +E + +V+ L+L P G
Sbjct: 444 ASGTPYLPAGLWICPLPTADDLRDISAER------GLDCSEDLKTKMRVVVQQLNL-PKG 496
Query: 438 KGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDA 497
+ P PNPAL+ Y L+ + ++ P D +TEP AI+
Sbjct: 497 ---VYNPLKYPNPALQWHYKILQTLALDEEVPEKPED-----LTEP-------KNKAINK 541
Query: 498 FCGQFVIKENPKLKKSTRRFLREK 521
G ++ LK R R +
Sbjct: 542 RAGGYLEDWAETLKDEADRAARSR 565
>gi|259484104|tpe|CBF80039.1| TPA: ATP-dependent DNA helicase II subunit 1 (EC
3.6.1.-)(ATP-dependent DNA helicase II subunit Ku70)
[Source:UniProtKB/Swiss-Prot;Acc:Q5AVC7] [Aspergillus
nidulans FGSC A4]
Length = 612
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 113/254 (44%), Gaps = 31/254 (12%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKD-VNLFIAEPGNSR 337
K Y++G V + E +++K E ++++GF S + +K + ++ E
Sbjct: 301 KAYKFGGDQVCFTPEEQKSLKDFGEPVIRIIGFKPLSTLPFWANIKHPLFIYPTEEDYVG 360
Query: 338 ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN------IPDSFYFN 391
+T SAL + + KVA+V + R+ S V+G + EK++ IP +
Sbjct: 361 STRVFSALYQKLLRDQKVALVWYIARKAA-SPVLGAMMAG-EEKVDENGIQKIPPGMWII 418
Query: 392 VLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPA 451
LPFA+DVR Q P + V+ +P Q +++ L L P G + P+ PNP+
Sbjct: 419 PLPFADDVR--QNPE-TALQVAPEPLIDQMR---TVIQQLQL-PKG---VYDPQKYPNPS 468
Query: 452 LERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLK 511
L+ Y L+ + +D P D ++ K + ID G +V+ +L+
Sbjct: 469 LQWHYRILQALALDEDVPEKPDDKTIPKYRQ------------IDKRAGGYVLDWADELE 516
Query: 512 KSTRRFLREKPSGS 525
K + ++P +
Sbjct: 517 KQYAKITADQPKST 530
>gi|403216001|emb|CCK70499.1| hypothetical protein KNAG_0E02380 [Kazachstania naganishii CBS
8797]
Length = 595
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 93/239 (38%), Gaps = 32/239 (13%)
Query: 204 ISPVTIFRGDLELSEKMKIKVWVYKKTGE-------------EKFPTLK-------KYSD 243
+ PV +F G L L + V ++ + E FP K K
Sbjct: 189 VKPVRVFSGVLRLGATLDTIVGKQEEDAQSVFEDPLSLAISVEGFPATKTVQGLNRKTMV 248
Query: 244 KAPSTD-KFATHEVKVDYEYKSVEDPSK---VVPPEQRIKGYRYGPQ--VVPISSAEWEA 297
K + D F VK EY + E+ + V + K YRYG V+P + +
Sbjct: 249 KTTTEDASFEYVPVKSVIEYTTKEESGRGAVSVSSQNVTKAYRYGADYVVLPDTIVDRSV 308
Query: 298 VKFKPEKSVKLLGFTDASNILRHYYMKDVNLFI---AEPGNSRATVAVSALARAMKEMNK 354
+ ++ + GF D + + RHY + ++FI + G L AM + K
Sbjct: 309 YRTGGPAAIDIRGFMDVTALPRHYLHSE-SIFILPDSRTGGVADETTFHVLVDAMLQAGK 367
Query: 355 VAIVRCVWR-QGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFS-KFP 411
+AI R V R +G + ++ S + + + LPFAED R FP + K P
Sbjct: 368 LAIARYVNRDRGSDVQMCALVALVTSTQHSSGSTLVLTRLPFAEDQRNSLFPPLTPKLP 426
>gi|196015567|ref|XP_002117640.1| hypothetical protein TRIADDRAFT_61626 [Trichoplax adhaerens]
gi|190579809|gb|EDV19898.1| hypothetical protein TRIADDRAFT_61626 [Trichoplax adhaerens]
Length = 619
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 92/214 (42%), Gaps = 26/214 (12%)
Query: 278 IKGYR-YGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMK-DVNLFIAEPGN 335
IK Y+ +G + V E +K + + L+GF + + RHY+++ ++ E
Sbjct: 321 IKYYQTFGGERVIFEKEEVGEIKNFGKNGLTLMGFKPKNCVKRHYHVRPSYFIYPDESVI 380
Query: 336 SRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVS----EKINI-PDSFYF 390
S +T VSAL + VAI + V R V L P K+ + P F
Sbjct: 381 SGSTRLVSALLERTLARDVVAICKFVPRFASGPKFVA-LVPQKEVLDEHKVQVVPPGFNV 439
Query: 391 NVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNP 450
LP+AED R+ K+ + P +Q + A ++VK L P+ NP
Sbjct: 440 VFLPYAEDFRQL------KYEETPAPMNEQVDKAKDIVKSLTFQ-------YNPDKFENP 486
Query: 451 ALERFYHHLELKSEHQDAAPPPLDDSLKKITEPD 484
AL++ Y +LE + +D +D TEPD
Sbjct: 487 ALQKHYSNLEALALDRDVPEEFID-----YTEPD 515
>gi|254570873|ref|XP_002492546.1| Subunit of the telomeric Ku complex (Yku70p-Yku80p) [Komagataella
pastoris GS115]
gi|238032344|emb|CAY70367.1| Subunit of the telomeric Ku complex (Yku70p-Yku80p) [Komagataella
pastoris GS115]
gi|328353442|emb|CCA39840.1| Protein Ku70 [Komagataella pastoris CBS 7435]
Length = 620
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 78/181 (43%), Gaps = 24/181 (13%)
Query: 241 YSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPP--------EQRIKGYRYGPQV-VPIS 291
+ + P KF +E +K VE S+ V P EQ IK Y G +P++
Sbjct: 251 FYHETPRKIKFVVNEGST---FKDVETKSQFVDPTSGKEFSSEQLIKAYPLGADAYIPLN 307
Query: 292 SAEWEAVKFKPE----KSVKLLGFTDASNILRHYYMKDVNLFIAEPGN----SRATVAVS 343
S + + + + S+++LGF D SN L Y + P N + + S
Sbjct: 308 SEQVKTINRFNDIINIPSLEILGFRDISNWLPQYQFGKASFL--SPNNYGDFTHSQRTFS 365
Query: 344 ALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNV--SEKINIPDSFYFNVLPFAEDVRE 401
L ++M + +K A++ + + G++ + E N+P F+ LP+ +DVR+
Sbjct: 366 CLLQSMTKKSKFAVLFGTLKNNAAPRLFGMIPSTLPQYESCNLPQGFFLIKLPYLDDVRQ 425
Query: 402 F 402
Sbjct: 426 L 426
>gi|13752526|gb|AAK38707.1|AF359591_1 XRCC5 [Oryzias latipes]
Length = 145
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 61/130 (46%), Gaps = 8/130 (6%)
Query: 371 VGVLTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV-K 429
VG P + + + + LPF ED+R F FPS P+E Q A D+L+
Sbjct: 16 VGAAFPCIKQTY---ECLIYVQLPFMEDLRPFAFPSLENN-KKICPSETQLSAVDSLIDS 71
Query: 430 MLDLAPSGKGEI---LQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPT 486
M+ + GE+ L+P PNPA +R + L ++ + PPL+ L+ +P
Sbjct: 72 MMLVEKDENGELIDLLKPHHIPNPAFQRHFQCLHHRAVNPGTPLPPLEPWLQAKLDPSEV 131
Query: 487 LLAESQSAID 496
+ Q++++
Sbjct: 132 IKERCQASLE 141
>gi|67901532|ref|XP_681022.1| hypothetical protein AN7753.2 [Aspergillus nidulans FGSC A4]
gi|74593383|sp|Q5AVC7.1|KU70_EMENI RecName: Full=ATP-dependent DNA helicase II subunit 1; AltName:
Full=ATP-dependent DNA helicase II subunit Ku70
gi|40742351|gb|EAA61541.1| hypothetical protein AN7753.2 [Aspergillus nidulans FGSC A4]
Length = 629
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 113/254 (44%), Gaps = 31/254 (12%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKD-VNLFIAEPGNSR 337
K Y++G V + E +++K E ++++GF S + +K + ++ E
Sbjct: 318 KAYKFGGDQVCFTPEEQKSLKDFGEPVIRIIGFKPLSTLPFWANIKHPLFIYPTEEDYVG 377
Query: 338 ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN------IPDSFYFN 391
+T SAL + + KVA+V + R+ S V+G + EK++ IP +
Sbjct: 378 STRVFSALYQKLLRDQKVALVWYIARKAA-SPVLGAMMAG-EEKVDENGIQKIPPGMWII 435
Query: 392 VLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPA 451
LPFA+DVR Q P + V+ +P Q +++ L L P G + P+ PNP+
Sbjct: 436 PLPFADDVR--QNPE-TALQVAPEPLIDQMR---TVIQQLQL-PKG---VYDPQKYPNPS 485
Query: 452 LERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLK 511
L+ Y L+ + +D P D ++ K + ID G +V+ +L+
Sbjct: 486 LQWHYRILQALALDEDVPEKPDDKTIPKYRQ------------IDKRAGGYVLDWADELE 533
Query: 512 KSTRRFLREKPSGS 525
K + ++P +
Sbjct: 534 KQYAKITADQPKST 547
>gi|400596414|gb|EJP64188.1| ku70 protein [Beauveria bassiana ARSEF 2860]
Length = 642
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 126/299 (42%), Gaps = 40/299 (13%)
Query: 265 VEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI-LRHYYM 323
ED ++ V + K Y++G + V S E +++K ++++GF +I +
Sbjct: 321 AEDSTRTVEKGEMKKAYKFGGEYVYFSPEEQKSLKDFGSPIIRIIGFKSRRSIPIWSSVK 380
Query: 324 KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL--TPNVSEK 381
K ++ +E +T +AL + + +KVA+ C+ R ++ ++ P E
Sbjct: 381 KSSFIYPSEEDYVGSTRVFTALWGKLLKSDKVALAWCIVRTNANPMLAAIMPSKPQSDED 440
Query: 382 IN---IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGK 438
+P + LPFA+D+R+ + P Q ++ + +++ L L +
Sbjct: 441 SGTPYLPAGLWLYPLPFADDLRDIKPPGKMA-----QASDDLKTQMRTIIQQLQLPKA-- 493
Query: 439 GEILQPELTPNPALERFYHHL-------ELKSEHQDAAPPPLDDSLKK----ITEPDPTL 487
+ P PNP+L+ Y L E+ +DA P K+ + + TL
Sbjct: 494 --MYNPTKYPNPSLQWHYKILQALALEEEVPESAEDATLPKFKAISKRAGGYLEDWSETL 551
Query: 488 LAESQSAIDAFCGQFVIKEN----PKLKKSTRRFLREKPSGSDEPN-------GDGSVS 535
E++S +A + V +EN P+ + +P GS+ + GDGS+S
Sbjct: 552 SREAKSTTEA---RAVKRENDDELPERPAKRGKTASAQPGGSELTSAQVKAAVGDGSIS 607
>gi|258571848|ref|XP_002544727.1| MUS51 protein [Uncinocarpus reesii 1704]
gi|237904997|gb|EEP79398.1| MUS51 protein [Uncinocarpus reesii 1704]
Length = 613
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 103/256 (40%), Gaps = 41/256 (16%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRA 338
K Y++G + + + E A++ + ++++GF S + +K G
Sbjct: 341 KAYKFGGEQITFTQEEQSALRNFGDPVIRIIGFRSMSLLPIWASIKQPTFIYPSEGVFVG 400
Query: 339 TVAV-SALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN-----IPDSFYFNV 392
+ V SAL + + + K A+V V R+ V+ ++ P E IP +
Sbjct: 401 STRVFSALQQTLLKQGKYALVWFVARKNAAPVMAAMI-PGEEELDEQGAQVIPPGMWILP 459
Query: 393 LPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV-KMLDLA-----PSGKGEILQPEL 446
LPFA+D+R P + A + LV KM D+ P + P+
Sbjct: 460 LPFADDIRR-------------NPETEHIVAPEPLVDKMRDVIQKLQLPKSR---YDPQK 503
Query: 447 TPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKE 506
PNP+L+ Y L+ + +D P D ++ K + ID G+FV+
Sbjct: 504 YPNPSLQWHYRILQALALDEDLPEQPEDKTIPKYKQ------------IDKRAGEFVVAW 551
Query: 507 NPKLKKSTRRFLREKP 522
+L+ R+ R KP
Sbjct: 552 GEELEDQYRQLDRPKP 567
>gi|223996153|ref|XP_002287750.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976866|gb|EED95193.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 1003
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 75/169 (44%), Gaps = 11/169 (6%)
Query: 272 VPPEQRIKGYRYGPQVVPISSAEWEAVK--FKPEKSVKLLGFTDASNILRH-YYMKDVNL 328
VP + R YR+G ++P+ + +K F +S++++G+ +++ M +
Sbjct: 427 VPLDSRTDAYRFGSDLIPVGKMDMLGIKAAFASPRSIEMIGYISKRDVISSGLCMGPAYV 486
Query: 329 FIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDS- 387
+ + ++ A++AL+ AM+E R V + +GVL P +
Sbjct: 487 VLGGKESKKSRGAIAALSLAMEEKGVWGFCRFV-KSVNGDPCIGVLIPKLVGSDGGNGEG 545
Query: 388 ---FYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDL 433
LPFA+D+ P+ P ++++ +A D+LV+ + L
Sbjct: 546 GRFLALLQLPFADDISHISTPA---VPAENWGDDKEAKACDSLVESMML 591
>gi|322712496|gb|EFZ04069.1| ku70 protein [Metarhizium anisopliae ARSEF 23]
Length = 646
Score = 47.0 bits (110), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 89/202 (44%), Gaps = 15/202 (7%)
Query: 265 VEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI-LRHYYM 323
ED + V + K Y++G + V + E ++++ ++++GF + +
Sbjct: 322 AEDSIRTVEKGEMKKAYKFGGEYVCFTPDEQKSLRDFGPPVIRIIGFKPRKLLPMWASVK 381
Query: 324 KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL-----TPNV 378
K +F +E +T +AL + + + NK+ I C+ R Q ++ ++ +
Sbjct: 382 KSTFIFPSEEDFVGSTRVFTALWQKLIKDNKIGIAWCIVRSNAQPILAAIVPSREPSDEK 441
Query: 379 SEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGK 438
S +P + LPFA+D+RE + P Q +++ + +V+ L L +
Sbjct: 442 SGTPYLPAGLWIYPLPFADDLREIKPPDGVT-----QSSDELKTQMRTIVQQLQLPKA-- 494
Query: 439 GEILQPELTPNPALERFYHHLE 460
+ P PNPAL+ Y L+
Sbjct: 495 --MYNPLKYPNPALQWHYKILK 514
>gi|225679444|gb|EEH17728.1| DSB repair complex subunit Ku70 [Paracoccidioides brasiliensis
Pb03]
Length = 654
Score = 47.0 bits (110), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 107/251 (42%), Gaps = 31/251 (12%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSR 337
K Y++G + + + E +++ + +++++GF S++ MK ++ +E G
Sbjct: 342 KSYKFGGEQISFTLDEQASLRNFGDPTIRIIGFKPISSLPIWASMKHPTFIYPSEEGYVG 401
Query: 338 ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN------IPDSFYFN 391
+T SAL + + + K+A+V V R+ V+ ++ K+N IP +
Sbjct: 402 STRVFSALYQTLLKKRKLALVWFVPRKNAAPVMAAMIPGKA--KLNEYGEQMIPQGMWIL 459
Query: 392 VLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPA 451
LPFA+D+R+ + P E D + ++ K + P+ PNP+
Sbjct: 460 PLPFADDIRQNPETNLIIAP---------DELVDKMRTVIQFLQLPKAQ-YDPQKYPNPS 509
Query: 452 LERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLK 511
L+ Y L+ + +D P D ++ K + ID G+ VI +L+
Sbjct: 510 LQWHYRILQALALDEDLPEKPEDKTIPKYRQ------------IDKRAGEHVIAWGEELE 557
Query: 512 KSTRRFLREKP 522
+ E+P
Sbjct: 558 SQYLKMETEQP 568
>gi|425774068|gb|EKV12387.1| Ku seventy [Penicillium digitatum Pd1]
gi|425776194|gb|EKV14423.1| Ku seventy [Penicillium digitatum PHI26]
Length = 653
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 99/208 (47%), Gaps = 19/208 (9%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSR 337
K Y++G + + + E +A++ + ++++GF S + +K + ++ +E
Sbjct: 344 KAYKFGGEQISFTIEEQQALRSFGDPVIRIIGFKSLSALPIWANVKHPSFIYPSEENYIG 403
Query: 338 ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN------IPDSFYFN 391
+T SAL + + + K+A+V + R+ V+ ++ +EKI+ IP +
Sbjct: 404 STRVFSALQQKLLDSEKLALVWFIPRKNASPVLAAMIAG--AEKIDENGVQKIPPGMWII 461
Query: 392 VLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPA 451
LPFA+DVR+ + ++ + +A ++V+ L L + + +P PNP+
Sbjct: 462 PLPFADDVRQNPESTVNR------AGDALNDAMRDVVRQLQLPKA----VYEPSKYPNPS 511
Query: 452 LERFYHHLELKSEHQDAAPPPLDDSLKK 479
L+ Y L+ + +D P D ++ K
Sbjct: 512 LQWHYRILQAIALDEDFPESPDDKTVPK 539
>gi|317419163|emb|CBN81200.1| ATP-dependent DNA helicase 2 subunit 1 [Dicentrarchus labrax]
Length = 624
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 96/448 (21%), Positives = 172/448 (38%), Gaps = 62/448 (13%)
Query: 5 REALLLLLDVSPSMHSVLPDVE--------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
R++L+ L+D S M D E ++ + K+I V ++ +GTE+++
Sbjct: 46 RDSLVFLVDASKEMFIKGEDGEPSNFDMTMQVVRSVYTSKIISSHRDLVALVFYGTEQSK 105
Query: 57 NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDYMLIKKYGETYKGKKHLC- 115
N +++V V D+ VQ + L A GET G C
Sbjct: 106 NPRN----SFKYVYVYHDLDEPGAKRVQEVDALRGEKGARLAAETMGSGETSLGDALWCC 161
Query: 116 --LITDALCPLK-----------DPDVG--TKEDQVSTIARQMVAFG--LRMKNIVVRAS 158
L +D L +P G K+ Q T A + G + + +++
Sbjct: 162 ANLYSDIKLRLSHKRLMIFTCRDEPHRGDSAKDRQARTKASDLKETGVIIDLMHLMKPGG 221
Query: 159 LSGEPHMRVII---ENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLE 215
P R I+ E+++ L + + D L+ + ++ + R +L
Sbjct: 222 FDVAPFFRDIVSQPEDESELGLHLEP-------CDKLEDLQKRVRAKEQKKRAMARLNLC 274
Query: 216 LSEKMKIKVWVYKKTGEEKFPT-LKKYSD-KAPSTDKFATHEVKVDYEYKSVEDPSKVVP 273
L E + + V +Y + P ++ Y + P K T ++ S ++P
Sbjct: 275 LGEGINVAVGIYATAVTARKPAAIRLYRETNEPVRSKTRTFHMQTG---------SLLLP 325
Query: 274 PEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP 333
E + K YG + + + E +++K + + L+GF + H++++ E
Sbjct: 326 SEIK-KAQTYGKKQIVMERDEVDSIKKFQDPGLYLIGFKPMEKLKTHHHIRPAVFLYPEE 384
Query: 334 GNSRATVAV-SALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSE----KINI-PDS 387
G + + + SAL E N A+ RCV R+ V L P E K+ P
Sbjct: 385 GEVKGSACLFSALLMKCSERNVFALCRCVSRRNYPPRFVA-LVPQREEVDEGKVQFTPPG 443
Query: 388 FYFNVLPFAEDVREF---QFPSFSKFPV 412
F LP+A+D+R Q PS S+ V
Sbjct: 444 FNVIYLPYADDLRTLDPPQCPSASQIQV 471
>gi|255949402|ref|XP_002565468.1| Pc22g15510 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592485|emb|CAP98839.1| Pc22g15510 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 658
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 98/208 (47%), Gaps = 19/208 (9%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSR 337
K Y++G + V + E +A++ + ++++GF S + +K + ++ +E
Sbjct: 344 KAYKFGGEQVSFTIEEQQALRSFGDPVIRIIGFKPLSALPFWANVKHPSFIYPSEEDYVG 403
Query: 338 ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN------IPDSFYFN 391
+T SAL + + E K+A+V + R+ V+ ++ +EKI+ IP +
Sbjct: 404 STRVFSALHQKLLESEKLALVWFIPRRNASPVLAAMIA--GAEKIDENGVQKIPPGMWII 461
Query: 392 VLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPA 451
LPFA+DVR Q P + + + +A ++V+ L L + + P PNP+
Sbjct: 462 PLPFADDVR--QNPESTVH----RAGDALNDAMRDVVRQLQLPKA----VYDPSKYPNPS 511
Query: 452 LERFYHHLELKSEHQDAAPPPLDDSLKK 479
L+ Y L+ + +D P D ++ K
Sbjct: 512 LQWHYRILQAIALDEDFPESPDDKTVPK 539
>gi|281203251|gb|EFA77451.1| hypothetical protein PPL_12053 [Polysphondylium pallidum PN500]
Length = 118
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 58/110 (52%), Gaps = 8/110 (7%)
Query: 328 LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDS 387
+ ++ P + A A+S+L M E+ + + R V R G+ S + +L P++ K N +
Sbjct: 1 MMVSPPADKVARSALSSLIHGMSEIKQALLSRYVKRNGR-SASISLLYPHI--KANY-EC 56
Query: 388 FYFNVLPFAEDVREFQF----PSFSKFPVSWQPNEQQQEAADNLVKMLDL 433
Y LPF +D++++QF P+ + + P +Q +AA L+ +DL
Sbjct: 57 IYVCQLPFLDDLKQYQFSPIVPTNAATRKPFIPTAEQVDAARALIDSMDL 106
>gi|195050106|ref|XP_001992829.1| GH13494 [Drosophila grimshawi]
gi|193899888|gb|EDV98754.1| GH13494 [Drosophila grimshawi]
Length = 711
Score = 46.6 bits (109), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 140/706 (19%), Positives = 281/706 (39%), Gaps = 93/706 (13%)
Query: 1 MARTREALLLLLDV-SPSMHSVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEETENEL 59
MA +E L+++LDV S + K + +++ K++ + V +L G EE+ENE+
Sbjct: 1 MASNKECLIIVLDVRSCAAEEFKLKSVKCIAEILKDKIVCDRKDFVSFVLVGCEESENEI 60
Query: 60 TKE-VGGYEHVKVLQDIKVVDGHLVQSL-KHLPQGTC-AGDYM----LIKKYGETYKG-- 110
E ++V +V + L+ + K + + C G+++ + ET G
Sbjct: 61 HAEDKDACQNVVQYSATQVCNWQLLLNFFKFVNKTPCDEGNWLDGLQVAVALQETAAGLF 120
Query: 111 ---KKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRM----KNIV-VRASLSGE 162
++ + L+ D + K D TI +M+ + + NI + + + +
Sbjct: 121 RFTRRRILLLYDF------NFMTQKYDDYKTITDRMLKDEIELIVGTHNIAYIDNAATNQ 174
Query: 163 PHMRVIIENDNLLNIFSKK---------SSAKTLFVDSTTSLRGARKTRDISPVTIFRGD 213
P + I + N+F ++ S+ + +L K + P ++
Sbjct: 175 P--QAIFQMSRKANLFEQENQKYALQLVSNCNAMLCTFKEALATVFKITNKRP-WVWNAK 231
Query: 214 LELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVP 273
L + + + I + E+ LKK +A E VD E + ++V P
Sbjct: 232 LHIGKVIAIHLQGIIAMKNERHIKLKKVWGEA---------EELVDREERYFIKGTEVTP 282
Query: 274 -PEQRIKGYRYGPQVVPISSAEWEAVKFKPEK---SVKLLGFTDASNILRHYYM-KDVNL 328
PE I GY G VP E + +P + +GF S+I Y+ + + +
Sbjct: 283 LPEDLIDGYMLGGTPVPYD----ETIVERPAAHSPGLHFVGFVKRSSIPDAYFCGESLYM 338
Query: 329 FIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSF 388
+ + GN + + AL RA+ + V + ++ + + VL P S + + P +
Sbjct: 339 LVHQKGNETSARKLDALVRALLQRQCVILCWKIFSVKFNTPRIVVLMPQDSTE-HRPATL 397
Query: 389 YFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEIL-----Q 443
Y L + + + FP+ + + Q +A D L+ +DL L Q
Sbjct: 398 YMLELSYHAQHQFWDFPAIRTAKT--ECSADQLQAVDKLIDSMDLECLLNDTQLPRQQRQ 455
Query: 444 PELTPNPALERFYHH-----LELKSEHQDAAPPPLDDSL--KKITE-----PDPTLLAES 491
+L P L + LE K Q + PL + + KK E P+P + +S
Sbjct: 456 ADLLPFDGLPSIFEQNVMDVLERKVVCQTSDDGPLLEMMREKKFVEMYWRVPEP-IEEKS 514
Query: 492 QSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNSMESKPVVTV 551
+ A A F ++ + +L + + E N ++ + +S + P+ T+
Sbjct: 515 KQAAAALKKLFPLEH-------SHAWLEKLKAKEQESNAPPTIKQERP-DSENTTPI-TI 565
Query: 552 DKIGDLTPIQDFEAMMSR-RDCPDWVDKAIE------DMKNKIFGLLENSNEGINYPKAV 604
+ +G +TP +D+ ++ + R + + ++ M+ + LLE + +N +
Sbjct: 566 ECVGLMTPAEDYRQLLEQVRSMANTTLRDVQFQSLAAQMRVVVITLLERNKLNLN--QLS 623
Query: 605 ELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKK 650
E+L R C+ ++N ++ RN F+ ++ +K
Sbjct: 624 EMLAMHRDSCLEFNSFGEYNQFAAQLKAKASDRNLHEFWTNVIVEK 669
>gi|346977166|gb|EGY20618.1| Ku70 [Verticillium dahliae VdLs.17]
Length = 646
Score = 46.2 bits (108), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 87/204 (42%), Gaps = 19/204 (9%)
Query: 266 EDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI-LRHYYMK 324
ED ++ V + K Y++G + + S + + K ++++GF + I K
Sbjct: 321 EDTARTVEKSETKKAYKFGGEYIYFSPEDQKRAKDFGPPIIRIIGFKTRAQIPFWASVKK 380
Query: 325 DVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVS-EKIN 383
+F +E +T SAL + + + NKVAI C+ R V+ ++ + S E+ N
Sbjct: 381 STFIFPSEEDFVGSTRVFSALWQKLLKSNKVAIAWCIIRANATPVLSAIIPSHESTEESN 440
Query: 384 ----IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNL---VKMLDLAPS 436
+P + LPFA+D+R + +P E D + V+ L L +
Sbjct: 441 ATPFLPAGLWLCPLPFADDLRGGPATDGT------EPPRASNELVDQMRVIVQQLQLPKA 494
Query: 437 GKGEILQPELTPNPALERFYHHLE 460
+ P PNP L+ Y L+
Sbjct: 495 ----MYNPMRYPNPGLQWHYKILQ 514
>gi|410896180|ref|XP_003961577.1| PREDICTED: X-ray repair cross-complementing protein 5-like
[Takifugu rubripes]
Length = 608
Score = 46.2 bits (108), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 93/213 (43%), Gaps = 22/213 (10%)
Query: 211 RGDLELSEKMKIKVWVYKKTGEEKFP-TLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPS 269
R +L L E + + V +Y K P ++K Y + T+K H ++ ++
Sbjct: 254 RLNLSLGEGLNLAVGIYAMAVPAKIPGSVKLYRE----TNK-QVHSKPQTFDTQT----G 304
Query: 270 KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLF 329
+++ P + K YG + + + E +++K + + L+GF + H++++
Sbjct: 305 RLLLPSEIKKAQVYGKKQIVMERDEVDSIKKFEDPGLYLIGFKPIKMLKIHHHIRPAVFI 364
Query: 330 IAEPGNSRATVAV-SALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSE------KI 382
E + + + SAL E + A+ RC+ R+ L P E +I
Sbjct: 365 YPEENMVKGSSCLFSALLTKCSEKDVFALCRCIIRRNCPP-RFAALVPQKEELDEGKVQI 423
Query: 383 NIPDSFYFNVLPFAEDVREF---QFPSFSKFPV 412
P F+ LP+A+D+R QFPS S+ PV
Sbjct: 424 TAP-GFHLIYLPYADDIRTLDPPQFPSASQIPV 455
>gi|281203260|gb|EFA77460.1| hypothetical protein PPL_12062 [Polysphondylium pallidum PN500]
Length = 137
Score = 46.2 bits (108), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 551 VDKIGDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVELLVAL 610
V+++G + P+Q+F+ M++RRD D VDKAI MK +I L+ +S + Y KA+E +V +
Sbjct: 43 VNEVGLINPVQNFKDMLARRDI-DLVDKAISLMKQRIVQLVNDSLKDQFYQKALECVVVV 101
>gi|407918739|gb|EKG12005.1| DNA-binding SAP [Macrophomina phaseolina MS6]
Length = 660
Score = 46.2 bits (108), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 130/318 (40%), Gaps = 43/318 (13%)
Query: 255 EVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDA 314
++ V K ED ++ V + K Y++G + V + E +A+++ + V+++GF
Sbjct: 321 QIAVAASSKIAEDTAREVQKTEIRKAYKFGGETVSFTEEETKALRYFGDPVVRIIGFKPL 380
Query: 315 SNILRHYYMKD-VNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGV 373
S + ++ + L+ E +T SAL + + + K+AI + R+ + +
Sbjct: 381 SMLPEWANLRSAIFLYPTEADFIGSTRVFSALQQNLLQKQKMAIAWFIPRRNAVPTLAAL 440
Query: 374 L-----TPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV 428
+ + +E++ P + LP+ +D+R P A+D L
Sbjct: 441 IPGKEKLGDRNEQVR-PPGLWAITLPYVDDIRR-------------NPETALVRASDRLT 486
Query: 429 K-MLDLAPS---GKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPD 484
M D+ + KGE P PNPAL+ FY L+ + + P D ++ K
Sbjct: 487 DIMRDIVQNLTLPKGE-YDPSRYPNPALQWFYRILQAIALEDELPDKPDDRTVPK----- 540
Query: 485 PTLLAESQSAIDAFCGQFVIKENPKLKK------STRRFLREKPSGSDEPNGDGSVSDAQ 538
I+ G+ V++ L++ + R R + +G D P S ++ +
Sbjct: 541 -------HRQINKRVGERVVEWGKALEEEYGYWTQSARKRRAEEAGEDVPGRAASATNKR 593
Query: 539 AVNSMESKPVVTVDKIGD 556
+ + P T D I D
Sbjct: 594 LKSEAGAVPSKTSDAIDD 611
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 58/115 (50%), Gaps = 18/115 (15%)
Query: 5 REALLLLLDVSPSM-HSVLPDVEKLCSR-------------LIQKKLIYGKNHEVGVILF 50
++A+L +DVS SM LP K R L+Q+++I N +GV+LF
Sbjct: 33 KDAVLFAIDVSHSMMKKPLPSDSKKADRDSPTSAALKCAYQLMQQRIISHPNDMMGVLLF 92
Query: 51 GTEET--ENELTKEVGG--YEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDYMLI 101
GTE++ ++E GG Y H +L D+ V + V+ L++L Q + +L+
Sbjct: 93 GTEQSKFQDEGANGRGGLQYPHCYLLTDLDVPAANDVKRLRNLVQEEEEAEELLV 147
>gi|156061149|ref|XP_001596497.1| hypothetical protein SS1G_02717 [Sclerotinia sclerotiorum 1980]
gi|154700121|gb|EDN99859.1| hypothetical protein SS1G_02717 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 645
Score = 46.2 bits (108), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 107/257 (41%), Gaps = 32/257 (12%)
Query: 255 EVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDA 314
++ V + ED ++V+ + K Y++G V + E + +K ++++GF
Sbjct: 311 QIPVGETTQMAEDSARVIQKTEIKKAYKFGGAQVLFTPDEQKELKNFGPSGLRIIGFKPQ 370
Query: 315 SNILRHYYMKDVNLFI--AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVG 372
S +L ++ + FI +E G +T SAL + + NK+ + + R+ +V
Sbjct: 371 S-MLPYWASVHKSTFIYPSENGYVGSTRVFSALWEKLLKDNKMGLGWYIARKDANPAIVA 429
Query: 373 VL------TPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADN 426
+L P +++I P + LPFA+D+R P P + DN
Sbjct: 430 ILPSVEKFDPATNQQI-FPAGLWLYPLPFADDLRSVSAPG---------PIIAPDKLIDN 479
Query: 427 LVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPT 486
+ ++ K + P PNP+L+ Y L+ + +D P D ++ K +
Sbjct: 480 MRIIIQQLQLPKAQ-YDPRNYPNPSLQWHYKILQALALEEDIPDVPEDKTIPKYRQ---- 534
Query: 487 LLAESQSAIDAFCGQFV 503
I CG+++
Sbjct: 535 --------IHKRCGEYI 543
>gi|168058549|ref|XP_001781270.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667252|gb|EDQ53886.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 606
Score = 46.2 bits (108), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 103/224 (45%), Gaps = 16/224 (7%)
Query: 256 VKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDAS 315
+K++ Y + + + P +R + Y+ G +VV S + +K ++LLGF S
Sbjct: 295 LKIERTYICSDTGALMHEPLKRFEEYQ-GKKVV-FSVDDVSDIKRISSVQLRLLGFKSMS 352
Query: 316 NILRHYYMKDVNLFIA--EPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGV 373
L+ Y+ + FI E +T A AL RAM +NK A+ C+ + +V V
Sbjct: 353 -CLQPYHNLRPSTFIYPDEVAVKGSTCAFIALHRAMVRLNKYALA-CLSSRATFQLVALV 410
Query: 374 LTPNVSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDL 433
+ N + Y LP+++D+R + S P+S + +E+Q E A +L+K L L
Sbjct: 411 AQEEEGDSTNGMNVIY---LPYSDDIRPAEKYHTSISPIS-KASEEQVEMATDLIKKLHL 466
Query: 434 APSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSL 477
+I +PAL++ Y +E +D D++L
Sbjct: 467 KNFSVTDI------QDPALQKQYRIIEAVGLEEDDISEIEDETL 504
>gi|440801849|gb|ELR22853.1| ATPdependent DNA helicase ii, 70 kDa subunit (ku70) superfamily
protein [Acanthamoeba castellanii str. Neff]
Length = 645
Score = 46.2 bits (108), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 104/465 (22%), Positives = 181/465 (38%), Gaps = 84/465 (18%)
Query: 33 IQKKLIYGKNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHL-PQ 91
+ K+I +N VGV +GTE+ N +E + VLQ++ V D + L+ L P
Sbjct: 27 LTDKIISSENDLVGVCFYGTEKKNNP-----NDFEGIYVLQELDVPDAQRIMDLEGLLPA 81
Query: 92 GTCAGDYMLIKKYGETYKGKKHLCLITDALC-PLKDPDVGTKEDQVSTIARQMVAFGLRM 150
G G L G+ + H C C L V +++ F
Sbjct: 82 GHPIGSLTL--AVGDDFTPFGH-CSADFPFCDALWTCSTMFSNCAVKVGHKRIFLFTNED 138
Query: 151 KNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTT---SLRGARKTRDISPV 207
+L + R N++++ S+ T+ D+++ LR + ++
Sbjct: 139 DPNAANKNLREQSFQRA----KNIISV-SEDEDTGTINFDASSKFEELRARVRRKEFKKR 193
Query: 208 TIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVED 267
I R L E ++I ++ GE +F + + D A + + + D
Sbjct: 194 AINRLSLLFGEDVEIS----RRGGEAEFDVVAEILDPA--------------HPCRCMRD 235
Query: 268 PSK------VVPP-----------------EQRIK-GYRYGPQVVPISSAEWEAVKFKPE 303
P+K V+ P + +IK + +G V E VK +
Sbjct: 236 PAKTPASQYVLHPLLKVAAAAAAAAGTLLMDSQIKYAFPFGGAKVVFDKEEALQVKSFDK 295
Query: 304 KSVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVW 362
K+++L+GF S + H + + ++ E +TVA +AL + +KV I C+W
Sbjct: 296 KALRLVGFKPRSAVKPHLNLSHSSFIYPDEQQVQGSTVAFAALLDRLLASDKVGI--CLW 353
Query: 363 -RQGQQSVVVGVLTPNVSE------KINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQ 415
R+ L P E ++N P F+ LPF++D+RE + + PVS
Sbjct: 354 TRRTNTPPRFVALVPQEEEVDDDGLQVN-PPGFHLVPLPFSDDIREIH--TEPQPPVS-- 408
Query: 416 PNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLE 460
+Q A LVK L + + NP+L+R Y +L+
Sbjct: 409 --PEQVIKAKKLVKALRINFDSRS-------FENPSLQRHYANLQ 444
>gi|121535194|ref|ZP_01667009.1| Ku domain protein [Thermosinus carboxydivorans Nor1]
gi|121306185|gb|EAX47112.1| Ku domain protein [Thermosinus carboxydivorans Nor1]
Length = 275
Score = 46.2 bits (108), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 53/101 (52%), Gaps = 5/101 (4%)
Query: 272 VPPEQRIKGYRYGPQ-VVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFI 330
VP EQ +KGY PQ V +++ E EA+ K +++++ F + I Y+ + L +
Sbjct: 56 VPNEQIVKGYEISPQRYVIVTTEELEALNPKASRTIEIEDFVNLDQIDPIYFEQSYYL-V 114
Query: 331 AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVV 371
+ G +A + L +AMK+ KVAI R V R Q V +
Sbjct: 115 PDKGAGKA---YTLLLQAMKQAGKVAIARVVLRNKQYLVTI 152
>gi|453085294|gb|EMF13337.1| DSB repair complex subunit Ku70 [Mycosphaerella populorum SO2202]
Length = 675
Score = 46.2 bits (108), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 114/259 (44%), Gaps = 22/259 (8%)
Query: 266 EDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKD 325
ED ++ V + + Y++G + V S + + E +++++GF S +L + D
Sbjct: 346 EDTARTVEKTEIRRAYKFGGETVSFSLEDMAKINDWGEPTIRIIGFKPLS-MLPVWATVD 404
Query: 326 VNLFI--AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKI- 382
+ FI +E +T SAL + + K+A+ + R+ S + L P E+
Sbjct: 405 KSTFIYPSEESFIGSTRVFSALHQKLLRDQKIALAWYIPRRN-ASPRLAALIPGEEERNE 463
Query: 383 ----NIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGK 438
++P + LPFA+D+R + K P ++ +A +V+ L L +
Sbjct: 464 EGEQHMPPGIWIKPLPFADDIRANPDVNLVKAP------DEVVDAMRLIVQQLQLPKA-- 515
Query: 439 GEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSL---KKITEPDPTLLAESQSAI 495
+ P PNPAL+ F+ L+ + +D P D +L K+I + E +
Sbjct: 516 --VYDPLKYPNPALQWFFRILQALALDEDLPEHPEDKTLPRWKQIHRRAGWYIVEWGEKL 573
Query: 496 DAFCGQFVIKENPKLKKST 514
DA Q++ + +K +T
Sbjct: 574 DAAFNQWLAENAASIKPAT 592
>gi|333896429|ref|YP_004470303.1| Ku protein [Thermoanaerobacterium xylanolyticum LX-11]
gi|333111694|gb|AEF16631.1| Ku protein [Thermoanaerobacterium xylanolyticum LX-11]
Length = 269
Score = 46.2 bits (108), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 59/121 (48%), Gaps = 7/121 (5%)
Query: 269 SKVVPPEQRIKGYRYGP-QVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN 327
+K V E+ +KGY Y P + V I + E + K++ ++ FTD I Y+ D
Sbjct: 52 NKEVSDEEIVKGYEYEPGKFVIIDEEDLERIPKSTVKTIDIIDFTDLRQIDPIYF--DKT 109
Query: 328 LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPN--VSEKINIP 385
+IA P A V L +MK++N+VA+ R V R Q + V N V E ++ P
Sbjct: 110 YYIA-PDEIGAKPYV-LLRDSMKKLNRVAVARVVIRSKQDLACIRVFNDNYMVMETMHFP 167
Query: 386 D 386
D
Sbjct: 168 D 168
>gi|308487536|ref|XP_003105963.1| CRE-CKU-80 protein [Caenorhabditis remanei]
gi|308254537|gb|EFO98489.1| CRE-CKU-80 protein [Caenorhabditis remanei]
Length = 722
Score = 46.2 bits (108), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 97/233 (41%), Gaps = 36/233 (15%)
Query: 245 APSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEK 304
A S KF K YK+VE+ + + GY +G V+ + E+ K+
Sbjct: 285 ADSASKFLPKNAK---NYKAVENI-------KTMHGYNFGKSVI-MMDPEYLKEKYNDHN 333
Query: 305 --------SVKLLGFTDASNILRHYYMKDVNLFIAEPG----NSRATVAVSALARAMKEM 352
+KL+ FT +NIL Y + D + P S AT A AL AM +
Sbjct: 334 FNEGQTGGVLKLIQFTKKANILDSY-LADASAKTVLPSLNSPTSGATKATVALIEAMLSL 392
Query: 353 NKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNV--LPFAEDVREFQFPSFSKF 410
AI R + +V +L P+ E + Y LPF++D+R +FP FS F
Sbjct: 393 RVAAICRYTFHAKSHVQIVALL-PHRDEDTGV---VYLRSVKLPFSDDMRTLKFPKFS-F 447
Query: 411 PV----SWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHL 459
S +P Q D+L+ + L + +++ ++ +P L+ H L
Sbjct: 448 DEDEVDSNKPTVAQLSVVDDLIDCMQLEETVISSLVEGGMS-DPKLQMQCHFL 499
>gi|348502391|ref|XP_003438751.1| PREDICTED: X-ray repair cross-complementing protein 5-like isoform
2 [Oreochromis niloticus]
Length = 612
Score = 45.8 bits (107), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 99/451 (21%), Positives = 172/451 (38%), Gaps = 68/451 (15%)
Query: 5 REALLLLLDVSPSMHSVLPDVE--------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
R++L+ L+D S M D E ++ + K+I V ++ +GTEE++
Sbjct: 34 RDSLVFLVDASKEMFIKGEDGEPSNFDMTMQVVRTVYTSKIISSDKDLVALVFYGTEESK 93
Query: 57 NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDYMLIKKYGETYKGKKHLCL 116
N ++HV V D+ VQ + L A GET G C
Sbjct: 94 NPRN----SFKHVYVYHDLSEPGAKRVQEVDALRGEKGAKLAAETIGSGETSLGDALWC- 148
Query: 117 ITDALCPLKDPDVGTKEDQVSTIARQMVAFGLR--------MKNIVVRASLSGEPHMRVI 168
C D+ ++ ++++ F R +K+ R S V+
Sbjct: 149 -----CANLYSDI-----KLRLSHKRLMIFTCRDEPHGGDSVKDRQARTKASDLKETGVV 198
Query: 169 IENDNLL------------NIFSKKSSAKTLFV-----DSTTSLRGARKTRDISPVTIFR 211
I+ +L+ +I S L + D L + +++ + R
Sbjct: 199 IDLMHLMKPGGFDISLFFCDIVSPPEDESELGLQLQPSDKLEDLLKRVRAKELKKRALAR 258
Query: 212 GDLELSEKMKIKVWVYKKTGEEKFP-TLKKYSD-KAPSTDKFATHEVKVDYEYKSVEDPS 269
+L L E + + V +Y + P ++K Y + P K T + S
Sbjct: 259 LNLCLGEGINVAVGIYATAVAARKPGSIKLYRETNEPVRSKTRTFHTQTG---------S 309
Query: 270 KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMK-DVNL 328
++P E + K YG + + + E +A+K + + L+GF + H++++ V L
Sbjct: 310 LLLPSEIK-KAQYYGGKEIVMERDEVDAIKKFDDPGLFLIGFKPMEKLKLHHHIRPAVFL 368
Query: 329 FIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNV---SEKINI- 384
+ E ++ SAL + E N A+ R + R+ V +L N K+ I
Sbjct: 369 YPEEDEVKGSSCLFSALLKKCSERNVFALCRFISRRNYPPRFVALLPQNEELDEGKVQIT 428
Query: 385 PDSFYFNVLPFAEDVREF---QFPSFSKFPV 412
P F LPFA+D R QFPS S+ V
Sbjct: 429 PPGFNVIYLPFADDFRTLDPPQFPSASQTQV 459
>gi|348502389|ref|XP_003438750.1| PREDICTED: X-ray repair cross-complementing protein 5-like isoform
1 [Oreochromis niloticus]
Length = 610
Score = 45.8 bits (107), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 99/451 (21%), Positives = 172/451 (38%), Gaps = 68/451 (15%)
Query: 5 REALLLLLDVSPSMHSVLPDVE--------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
R++L+ L+D S M D E ++ + K+I V ++ +GTEE++
Sbjct: 32 RDSLVFLVDASKEMFIKGEDGEPSNFDMTMQVVRTVYTSKIISSDKDLVALVFYGTEESK 91
Query: 57 NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDYMLIKKYGETYKGKKHLCL 116
N ++HV V D+ VQ + L A GET G C
Sbjct: 92 NPRN----SFKHVYVYHDLSEPGAKRVQEVDALRGEKGAKLAAETIGSGETSLGDALWC- 146
Query: 117 ITDALCPLKDPDVGTKEDQVSTIARQMVAFGLR--------MKNIVVRASLSGEPHMRVI 168
C D+ ++ ++++ F R +K+ R S V+
Sbjct: 147 -----CANLYSDI-----KLRLSHKRLMIFTCRDEPHGGDSVKDRQARTKASDLKETGVV 196
Query: 169 IENDNLL------------NIFSKKSSAKTLFV-----DSTTSLRGARKTRDISPVTIFR 211
I+ +L+ +I S L + D L + +++ + R
Sbjct: 197 IDLMHLMKPGGFDISLFFCDIVSPPEDESELGLQLQPSDKLEDLLKRVRAKELKKRALAR 256
Query: 212 GDLELSEKMKIKVWVYKKTGEEKFP-TLKKYSD-KAPSTDKFATHEVKVDYEYKSVEDPS 269
+L L E + + V +Y + P ++K Y + P K T + S
Sbjct: 257 LNLCLGEGINVAVGIYATAVAARKPGSIKLYRETNEPVRSKTRTFHTQTG---------S 307
Query: 270 KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMK-DVNL 328
++P E + K YG + + + E +A+K + + L+GF + H++++ V L
Sbjct: 308 LLLPSEIK-KAQYYGGKEIVMERDEVDAIKKFDDPGLFLIGFKPMEKLKLHHHIRPAVFL 366
Query: 329 FIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNV---SEKINI- 384
+ E ++ SAL + E N A+ R + R+ V +L N K+ I
Sbjct: 367 YPEEDEVKGSSCLFSALLKKCSERNVFALCRFISRRNYPPRFVALLPQNEELDEGKVQIT 426
Query: 385 PDSFYFNVLPFAEDVREF---QFPSFSKFPV 412
P F LPFA+D R QFPS S+ V
Sbjct: 427 PPGFNVIYLPFADDFRTLDPPQFPSASQTQV 457
>gi|307104778|gb|EFN53030.1| hypothetical protein CHLNCDRAFT_53981 [Chlorella variabilis]
Length = 658
Score = 45.8 bits (107), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 122/288 (42%), Gaps = 33/288 (11%)
Query: 216 LSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPE 275
L + +++ V +Y+ ++ P K S + K AT ++ Y +++E +
Sbjct: 280 LGKGLELAVKLYQMVQRQRIPPALKISGRTGHEVKAATAQID-KYTGEALEKDQ--ILHY 336
Query: 276 QRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGF-----TDASNILRHYYMKDVN--- 327
KG RY P+V I+ E +K ++ + LLGF ++R +K+ +
Sbjct: 337 YFKKGNRY-PKVY-ITPEETRQIKGVGQRGMTLLGFKPIRRGSGGCVVRWCCLKEHHQTR 394
Query: 328 ----LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN 383
++ E + + AL M+E +A+ R + + +V +L ++ +
Sbjct: 395 NSTFIYPDEKEVAGSATCFIALWDVMRETGTMAVCRVAPTKARTPTLVALLPQEETQYDD 454
Query: 384 ----IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKG 439
P + LPF +D+R + + V P+E Q AA+ L+ L L G
Sbjct: 455 GSQATPPGMHLIYLPFMDDIRHPETSADFVGAVRHAPSESQVAAAEVLILELQLPAFDCG 514
Query: 440 EILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTL 487
+L NPAL+R Y LE S Q P ++DS + DPTL
Sbjct: 515 SVL------NPALQRHYEVLE--SLAQGMEPCLVEDS----SIGDPTL 550
>gi|395326731|gb|EJF59137.1| ku70-like protein [Dichomitus squalens LYAD-421 SS1]
Length = 657
Score = 45.8 bits (107), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 122/623 (19%), Positives = 229/623 (36%), Gaps = 116/623 (18%)
Query: 5 REALLLLLDVSPSMHSVLPDVE----KLCSRLI---------QKKLIYGKNHEVGVILFG 51
R+ +L +D SPSM + D + C+ +I ++K++ G + VG++LF
Sbjct: 28 RDVILFCIDCSPSMLELREDPRYEDVQTCNLMIALEAAMQIQKRKVLVGPSDSVGIMLFN 87
Query: 52 TEETENELTKEVGGYEHVKVLQDIKVVD----GHLVQSL-------------------KH 88
T + T + V Q + +D L+Q L K
Sbjct: 88 TTKRNESGTVGADIKKGTFVYQPLATIDVPKVAQLLQLLDEARENPGVLREEFPPMKDKR 147
Query: 89 LPQGTCAGDYMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIAR----QMV 144
+P G + + G K + ITD +P G ++ T AR +V
Sbjct: 148 IPVGDVFTSCNWVMRDGAPKTATKRVFFITDE----DNPHPGAAISRLMTSARTTLIDLV 203
Query: 145 AFGLRMKNIVVRASLSGEPHMRV---------IIENDNLLNIFSKKSSAKTLFVDSTTSL 195
G+ ++ + A R I ++D++ + +++ + L
Sbjct: 204 QAGVTVEPFFISADEKPFDPSRFYSSVLLPTNITDSDDIGDNDGSSILPESISIGRIDEL 263
Query: 196 RGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHE 255
+ ++ F +L+ I V Y E+K + +++ + +
Sbjct: 264 LAQMRFHEVPKRAAFSVPFQLAPDFVIGVKGYGLITEQKKGAYRYFAETDAGVEVVESRT 323
Query: 256 VKVDYEYKSVEDPSKVV-------------PPEQRIKGYRYGPQVVPIS-----SAEWEA 297
VD E + D +++ E KG G + V +AE E
Sbjct: 324 SYVDEEQEEEVDKGQILYGMDLGAPSAEAGDEEGDAKGVDAGTRSVAFGYRVFYTAE-EV 382
Query: 298 VKFKP---EKSVKLLGFTDASNI-----LRHYYMKDVNLFIAEPGNSRATVAVSALARAM 349
F+ E +KLLGF + ++H + ++ E S + +AL R M
Sbjct: 383 RAFRTLGLEPGIKLLGFKGRKELAFEDNIKHSFF----IYPDEMTFSGSKRTFTALLRTM 438
Query: 350 KEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINI-----PDSFYFNVLPFAEDVREFQF 404
K+AIV + R+ + +L EK++ P F+ LPFA+D+R
Sbjct: 439 ISKKKIAIVLALTRRNSSPIFCAMLPQE--EKVDESGWREPPGFHLIPLPFADDIR---- 492
Query: 405 PSFSKFPV--SWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELK 462
PV +++ +++ +EAA + L++ K P+ PNPAL LE +
Sbjct: 493 ----AAPVERAFRASDELKEAARKWIDKLNV----KNGSYPPDSYPNPALAYHNAQLEAQ 544
Query: 463 SEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKP 522
+ +D +D +TEP ++ + GQ + +L++ + P
Sbjct: 545 AFREDFDAEAFED----LTEPKYDMIHKR-------AGQLIKAWKEELREDESANIVSAP 593
Query: 523 SGSDEPNGDGSVSDAQAVNSMES 545
+ D SV +A+ + E+
Sbjct: 594 LAGSKRKADVSVDEAEVRSKYEA 616
>gi|340517647|gb|EGR47890.1| hypothetical protein TRIREDRAFT_63200 [Trichoderma reesei QM6a]
Length = 649
Score = 45.8 bits (107), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 146/338 (43%), Gaps = 37/338 (10%)
Query: 265 VEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI-LRHYYM 323
ED ++ V ++ K Y++G + V + E + ++ +++++GF S I +
Sbjct: 327 AEDSARTVEKQEIKKAYKFGGEYVYFTPEEQKKLRDFGAPTIRIIGFKKRSMIPVWASVK 386
Query: 324 KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN 383
K +F +E +T SAL + + + +K+ + CV R Q + ++ + +
Sbjct: 387 KSTFIFPSEEDYIGSTRVFSALWQKLLKDDKIGLAWCVLRSNAQPMFAALIPSREQSEDD 446
Query: 384 -----IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGK 438
+P + LP A+D+R+ K S E + +V+ L+L P G
Sbjct: 447 AGTPYLPAGLWLYPLPTADDLRDINVE--RKLDCS----EDLKTKMRVIVQQLNL-PKG- 498
Query: 439 GEILQPELTPNPALERFYHHLEL-------KSEHQDAAPPPLDDSLKKIT----EPDPTL 487
I P PNPAL+ Y L+ E +D P K++ E TL
Sbjct: 499 --IYNPLKYPNPALQWHYKILQTLALEEEMPEEPEDLTEPKNKAISKRVGGYLEEWSETL 556
Query: 488 LAESQSAIDAFCGQFVIKEN-PKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNSMESK 546
E+ A + + I+++ P+ R+ E+PSGS+ +S AQ +++ES
Sbjct: 557 KDEADRATRSRSLKREIEDDAPERPAKQRKVAGERPSGSN-------LSMAQLRDAIESG 609
Query: 547 PV--VTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIED 582
+ +TV ++ D+ + + D + +++ +E+
Sbjct: 610 SISKMTVAQLKDVAGARGLSTGGKKADLLERIEQWVEE 647
>gi|159162869|pdb|1Q2Z|A Chain A, The 3d Solution Structure Of The C-Terminal Region Of Ku86
Length = 120
Score = 45.8 bits (107), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 65/123 (52%), Gaps = 9/123 (7%)
Query: 555 GDLTPIQDFEAMMSRRDCPDWVDKAIEDMKNKIFGLLE---NSNEGINYPKAVELLVALR 611
G + P ++F ++ ++ + E+ N++ +E ++NE + K+++ + A R
Sbjct: 1 GPVNPAENFRVLVKQKKA------SFEEASNQLINHIEQFLDTNETPYFMKSIDCIRAFR 54
Query: 612 KGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKKLSLISKSEAVDSDITDDEAGS 671
+ I E ++FN+ L+ + + + + F++ ++ ++LI+K EA S +T +EA
Sbjct: 55 EEAIKFSEEQRFNNFLKALQEKVEIKQLNHFWEIVVQDGITLITKEEASGSSVTAEEAKK 114
Query: 672 FIV 674
F+
Sbjct: 115 FLA 117
>gi|317149552|ref|XP_003190337.1| ATP-dependent DNA helicase II subunit 1 [Aspergillus oryzae RIB40]
gi|121795552|sp|Q2MHH4.1|KU70_ASPOR RecName: Full=ATP-dependent DNA helicase II subunit 1; AltName:
Full=ATP-dependent DNA helicase II subunit Ku70
gi|85677424|dbj|BAE78501.1| Ku70 protein [Aspergillus oryzae]
Length = 655
Score = 45.4 bits (106), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 125/591 (21%), Positives = 231/591 (39%), Gaps = 117/591 (19%)
Query: 5 REALLLLLDVSPSMHSVLPDVE--------------KLCSRLIQKKLIYGKNHEVGVILF 50
++A+L ++VS SM + P + K L+Q+++I +GV+L+
Sbjct: 29 KDAVLFAIEVSDSMLTPRPSSDSKKPAEESPTTAALKCAYYLMQQRIISNPRDMIGVLLY 88
Query: 51 GTEET----ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDYMLIKKYG 105
GT+ + E+E ++ Y H + D+ V V++L+ L Q G + D ++K G
Sbjct: 89 GTQASKFYDEDENSRGDLSYPHCYLFTDLDVPSAQEVKNLRALAQDGDESKD--VLKASG 146
Query: 106 E---------------TYKG----KKHLCLITDALCPLKDPDVGTKEDQVSTI-ARQMVA 145
E T K + L ++TD P D ST+ A+ +
Sbjct: 147 ERVSMANVLFCANQIFTSKAPNFLSRRLFIVTDNDDPHGD---NKSLRSASTVRAKDLYD 203
Query: 146 FGLRMK------------------NIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTL 187
G+ ++ +I+ +AS S +P ++ D SK S A
Sbjct: 204 LGVTIELFPISRPGHEFDTARFYDDIIYKASPS-DPDAPAYLQTD------SKASPATGD 256
Query: 188 FVDSTTSLRGARKTRDISPVTIFRG-DLELSEKMKIKVWVY-----KKTGEEKFPTLKKY 241
+ +L +R + F LEL +KI V Y + F L
Sbjct: 257 GISLLNTLLSNINSRSVPRRAQFSNIPLELGPNLKISVSGYLLFKRQAPARNSFIWL--- 313
Query: 242 SDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFK 301
+ P K T ++ +D ++ + + K Y++G V + E ++++
Sbjct: 314 GGEQPQIVKGVTTQI--------ADDTARTIEKWEIKKAYKFGGDQVAFTPEEMKSLRNF 365
Query: 302 PEKSVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSRATVAVSALARAMKEMNKVAIVRC 360
+ ++++GF S + +K + ++ +E +T SAL + + K A+V
Sbjct: 366 GDPVIRIIGFKPLSALPFWANIKHPSFIYPSEEDFVGSTRVFSALHQTLLRDKKAALVWF 425
Query: 361 VWRQGQQSVVVGVLTPNVSEKIN------IPDSFYFNVLPFAEDVREFQFPSFSKFPVSW 414
+ R+ S V+G + EK++ P + LPFA+DVR Q P + V+
Sbjct: 426 IARKNA-SPVLGAMVAG-EEKLDESGVQKFPPGMWIIPLPFADDVR--QNPE-TTLHVAP 480
Query: 415 QPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLD 474
+P Q +V+ L L + P PNP+L+ Y L+ + +D P D
Sbjct: 481 EPLIDQMRY---IVQQLQLPKAS----YDPFKYPNPSLQWHYRILQALALDEDLPEKPED 533
Query: 475 DSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGS 525
+L + + ID G +V+ +L+K + P +
Sbjct: 534 KTLPRYRQ------------IDKRTGDYVLSWADELEKQYAKISAHGPKST 572
>gi|238495310|ref|XP_002378891.1| DSB repair complex subunit Ku70, putative [Aspergillus flavus
NRRL3357]
gi|220695541|gb|EED51884.1| DSB repair complex subunit Ku70, putative [Aspergillus flavus
NRRL3357]
Length = 655
Score = 45.4 bits (106), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 125/591 (21%), Positives = 231/591 (39%), Gaps = 117/591 (19%)
Query: 5 REALLLLLDVSPSMHSVLPDVE--------------KLCSRLIQKKLIYGKNHEVGVILF 50
++A+L ++VS SM + P + K L+Q+++I +GV+L+
Sbjct: 29 KDAVLFAIEVSDSMLTPRPSSDSKKPAEESPTTAALKCAYYLMQQRIISNPRDMIGVLLY 88
Query: 51 GTEET----ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDYMLIKKYG 105
GT+ + E+E ++ Y H + D+ V V++L+ L Q G + D ++K G
Sbjct: 89 GTQASKFYDEDENSRGDLSYPHCYLFTDLDVPSAQEVKNLRALAQDGDESKD--VLKASG 146
Query: 106 E---------------TYKG----KKHLCLITDALCPLKDPDVGTKEDQVSTI-ARQMVA 145
E T K + L ++TD P D ST+ A+ +
Sbjct: 147 ERVSMANVLFCANQIFTSKAPNFFSRRLFIVTDNDDPHGD---NKSLRSASTVRAKDLYD 203
Query: 146 FGLRMK------------------NIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTL 187
G+ ++ +I+ +AS S +P ++ D SK S A
Sbjct: 204 LGVTIELFPISRPGHEFDTARFYDDIIYKASPS-DPDAPAYLQTD------SKASPATGD 256
Query: 188 FVDSTTSLRGARKTRDISPVTIFRG-DLELSEKMKIKVWVY-----KKTGEEKFPTLKKY 241
+ +L +R + F LEL +KI V Y + F L
Sbjct: 257 GISLLNTLLSNINSRSVPRRAQFSNIPLELGPNLKISVSGYLLFKRQAPARNSFIWL--- 313
Query: 242 SDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFK 301
+ P K T ++ +D ++ + + K Y++G V + E ++++
Sbjct: 314 GGEQPQIVKGVTTQI--------ADDTARTIEKWEIKKAYKFGGDQVAFTPEEMKSLRNF 365
Query: 302 PEKSVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSRATVAVSALARAMKEMNKVAIVRC 360
+ ++++GF S + +K + ++ +E +T SAL + + K A+V
Sbjct: 366 GDPVIRIIGFKPLSALPFWANIKHPSFIYPSEEDFVGSTRVFSALHQTLLRDKKAALVWF 425
Query: 361 VWRQGQQSVVVGVLTPNVSEKIN------IPDSFYFNVLPFAEDVREFQFPSFSKFPVSW 414
+ R+ S V+G + EK++ P + LPFA+DVR Q P + V+
Sbjct: 426 IARKNA-SPVLGAMVAG-EEKLDESGVQKFPPGMWIIPLPFADDVR--QNPE-TTLHVAP 480
Query: 415 QPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLD 474
+P Q +V+ L L + P PNP+L+ Y L+ + +D P D
Sbjct: 481 EPLIDQMRY---IVQQLQLPKAS----YDPFKYPNPSLQWHYRILQALALDEDLPEKPED 533
Query: 475 DSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGS 525
+L + + ID G +V+ +L+K + P +
Sbjct: 534 KTLPRYRQ------------IDKRTGDYVLSWADELEKQYAKISAHGPKST 572
>gi|307185845|gb|EFN71686.1| ATP-dependent DNA helicase 2 subunit 1 [Camponotus floridanus]
Length = 506
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 19/111 (17%)
Query: 5 REALLLLLDVSPSMHSV-----LPDVE--------KLCSRLIQKKLIYGKNHEVGVILFG 51
REA L L+D + M + P+ E KL +++++KL + +GV+LFG
Sbjct: 25 REATLFLVDATHRMFEIEKNQTQPETERSYIQKFFKLYKQILRQKLAWSMQDWMGVVLFG 84
Query: 52 TEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDYMLIK 102
TEE++ ++H++ LQ+++VV +Q ++ L + G Y IK
Sbjct: 85 TEESDAN-----SSWKHIQNLQELRVVTLDDLQRIRKLTKSGMKG-YQSIK 129
>gi|333370783|ref|ZP_08462761.1| Ku family DNA end-binding protein [Desmospora sp. 8437]
gi|332977070|gb|EGK13874.1| Ku family DNA end-binding protein [Desmospora sp. 8437]
Length = 270
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 52/117 (44%), Gaps = 6/117 (5%)
Query: 272 VPPEQRIKGYRYGP-QVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFI 330
VP E+ +KGY Y Q V + E EA+ + K++++L F I YY K L
Sbjct: 55 VPWEEVVKGYEYADNQFVLMKKEELEAILPENRKAIEILDFVKLEEIDPIYYDKSYYLGP 114
Query: 331 AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPN-VSEKINIPD 386
E GN A S L AM E K+ + + R Q VV V V E I PD
Sbjct: 115 GEHGNH----AYSLLRDAMAETGKIGVAKITIRSKQSLAVVRVHQSCLVMETIFYPD 167
>gi|296133062|ref|YP_003640309.1| Ku protein [Thermincola potens JR]
gi|296031640|gb|ADG82408.1| Ku protein [Thermincola potens JR]
Length = 281
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 64/130 (49%), Gaps = 15/130 (11%)
Query: 255 EVKVDYEYKSVEDPSK----------VVPPEQRIKGYRYGP-QVVPISSAEWEAVKFKPE 303
+VK +Y ++ + P K VPPE+ ++GY Y + V + ++E + +
Sbjct: 28 DVKFNYLHEKCKTPIKYERICPTCDTTVPPEEIVRGYEYEKGRYVILRDEDFEKLPLETA 87
Query: 304 KSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWR 363
+S+ ++ F + I Y+ D + ++A PG+ A L AMKE NK+AI + V R
Sbjct: 88 RSIDIIDFVELEEIDPIYF--DKSYYLA-PGDG-GQKAYELLKSAMKEANKIAIAKVVIR 143
Query: 364 QGQQSVVVGV 373
+ V + V
Sbjct: 144 SKEAIVALRV 153
>gi|390934412|ref|YP_006391917.1| DNA repair protein [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
gi|389569913|gb|AFK86318.1| DNA repair protein [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
Length = 269
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 59/121 (48%), Gaps = 7/121 (5%)
Query: 269 SKVVPPEQRIKGYRYGP-QVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN 327
+K V E+ ++GY Y P + V I + E + K++ ++ FTD I Y+ D
Sbjct: 52 NKEVSDEEIVRGYEYEPGKFVIIDEEDLERIPKSTVKTIDIIDFTDLRQIDPIYF--DRT 109
Query: 328 LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPN--VSEKINIP 385
+IA P A V L +MK++N+VA+ R V R Q + V N V E ++ P
Sbjct: 110 YYIA-PDEIGAKPYV-LLRDSMKKLNRVAVARVVIRSRQDLACIRVFNDNYMVMETMHFP 167
Query: 386 D 386
D
Sbjct: 168 D 168
>gi|365991283|ref|XP_003672470.1| hypothetical protein NDAI_0K00360 [Naumovozyma dairenensis CBS 421]
gi|343771246|emb|CCD27227.1| hypothetical protein NDAI_0K00360 [Naumovozyma dairenensis CBS 421]
Length = 620
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 100/230 (43%), Gaps = 25/230 (10%)
Query: 275 EQRIKGYRYGPQVVPISSAEWEAVKFK---PEKSVKLLGFTDASNILRHYYMKDVNLFIA 331
++ +K + YG + ++ E V+ + PE +K++GF + L ++ F+
Sbjct: 351 DEYVKIFPYGDMNIELNDKEVYKVEEEISCPEAFLKIIGFRSKNQCLYYFNNITATTFVV 410
Query: 332 EPGNSRATVAVSALA---RAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSF 388
P S+ ++ +A R +K+ +KVAI+ + + + +L P + N + F
Sbjct: 411 -PDESQYEGSIRTMASLFRTLKKKDKVAIIWGKMKTNSKPCLY-LLCPTSNSDRN--EGF 466
Query: 389 YFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV----KMLDLAPSGKGEILQP 444
Y +PF E++R +FP + + NL+ K+++ G I P
Sbjct: 467 YLYRMPFLEEIR--KFPKLLDY-----KDRSSNPDYTNLIKITSKIVEYFHLRNGYI--P 517
Query: 445 ELTPNPALERFYH--HLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQ 492
NP+L+RFY H L Q A ++K+ E D TL SQ
Sbjct: 518 SEFENPSLQRFYRVLHDYLLQVEQSMAEGDEQHQIQKLLEEDDTLRKISQ 567
>gi|170094156|ref|XP_001878299.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164646753|gb|EDR10998.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 653
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 126/577 (21%), Positives = 227/577 (39%), Gaps = 109/577 (18%)
Query: 5 REALLLLLDVSPSMHSVL--PDVEKLCS-----------RLIQKKLIYGKNHEVGVILFG 51
++ +L +D S SM ++ P+ E + + ++ +KK+I G N VG++LF
Sbjct: 28 KDVILFCIDCSESMLALYDDPNYEDVQTCHLYAALEAAMQIQKKKIIVGPNDSVGILLFN 87
Query: 52 -TEETE------NELTKEVGGYEHV------KVLQDIKVVDG------HLVQSL-----K 87
T ++E +E+ K Y+ + KV + I+++D L ++ K
Sbjct: 88 ITRKSEQAQSHASEIKKNTFVYQPITPLGAPKVQELIQLLDAAREDPNELTKTFPPLVGK 147
Query: 88 HLPQGTCAGDYMLIKKYGETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFG 147
+P G + + G K + LITD DP G Q+ T AR +
Sbjct: 148 RVPMGDVFTSCNWVLRDGAPKTASKRVFLITDE----DDPHAGPGSKQLITSARTTL-ID 202
Query: 148 LRMKNIVVRA---SLSGEP-HMR------VIIENDNLLNIFSKKSSA--KTLFVDSTTSL 195
L + V S +P H+ ++ N N + + SS +++ + L
Sbjct: 203 LTQAGVTVEPFFISTENKPFHVSKFYSSVLLPSNLNDEDELQEDSSVLPESISISRIEDL 262
Query: 196 RGARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHE 255
+ ++ + L+L E I V Y E+K K + D +
Sbjct: 263 LAQMRFHEVPKRAQYSVPLQLGEGFTIGVKGYGLVTEQKKGAYKYFVDLGDRMEVATVKT 322
Query: 256 VKVDYEYKSVEDPSKVV--------------PPEQRIKGY-----RYGPQVVPISSAEWE 296
+D + ++ D +K+ + G+ +YG + P +AE E
Sbjct: 323 TYIDEDQEAEVDKAKIFYGPALGAAAANDDEDNQDADDGFGTRAVKYGNR--PFYTAE-E 379
Query: 297 AVKFKP---EKSVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSRATVAVSALARAMKEM 352
F+ E +KLLGF D + + +K ++ E S + SAL ++M +
Sbjct: 380 IRSFRTLGLEPGIKLLGFKDRTELAFEDNIKHSQFIYPDEMSYSGSKRTFSALLKSMIKK 439
Query: 353 NKVAIVRCVWRQGQQSVVVGVLTPNVSEKINI-----PDSFYFNVLPFAEDVREFQFPSF 407
K+ + + R+ S + L P EK++ P F+ LPFA+D+R
Sbjct: 440 EKIGLALALTRR-NSSPIFCYLLPQ-EEKVDDSGWSEPAGFHIIPLPFADDIRS------ 491
Query: 408 SKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQD 467
+ ++ +E ++ A + L S K P+ PNPAL YH+ +L++
Sbjct: 492 APIEEGFRASEDLKDYARAWIDKL----SVKNGTYPPDSYPNPALA--YHNAQLQASAFR 545
Query: 468 AAPPPLDDSLKKITEPD--------PTLLAESQSAID 496
P DS + +T P LL E +SA++
Sbjct: 546 EQYDP--DSFEDLTAPKLEMIHKRAGNLLGEWKSAVN 580
>gi|339444943|ref|YP_004710947.1| hypothetical protein EGYY_13950 [Eggerthella sp. YY7918]
gi|338904695|dbj|BAK44546.1| uncharacterized ACR [Eggerthella sp. YY7918]
Length = 283
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 57/101 (56%), Gaps = 7/101 (6%)
Query: 263 KSVEDPSKVVPPEQRIKGYRY--GPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRH 320
K+ D + + P+ +KGY+Y G VV IS E +++K + ++SVK++ F+D S +
Sbjct: 45 KTCPDCKRELGPDDIVKGYQYEKGKYVV-ISDDELDSLKTEADRSVKIVQFSDLSEVPPL 103
Query: 321 YYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCV 361
Y+ K + +A+ G + A+ L RAM E K+AI V
Sbjct: 104 YFEKPYQV-VAQSGGEK---ALELLHRAMAEEGKIAIGTTV 140
>gi|326387045|ref|ZP_08208655.1| glycosyl transferase, group 1 [Novosphingobium nitrogenifigens DSM
19370]
gi|326208226|gb|EGD59033.1| glycosyl transferase, group 1 [Novosphingobium nitrogenifigens DSM
19370]
Length = 361
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 47/115 (40%), Gaps = 18/115 (15%)
Query: 26 EKLCSRLIQKKLIYGKNHEVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQS 85
EK L+ G +H+VG++L G + + +GG HV+VL I +
Sbjct: 194 EKRWPMLVDAVAAAGNHHQVGLVLIGQGRDRKAIERSIGGNPHVRVLAPI--------TN 245
Query: 86 LKHLPQGTCAGDYMLIKKYGETYKGKKHLCLITDALC----PLKDPDVGTKEDQV 136
L + +GD +L ET+ C++ C PL PD G DQ
Sbjct: 246 RGELARVMASGDALLHGCEAETF------CMVAAEACASGLPLIAPDEGGAADQA 294
>gi|449468754|ref|XP_004152086.1| PREDICTED: ATP-dependent DNA helicase 2 subunit KU70-like [Cucumis
sativus]
Length = 625
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 101/232 (43%), Gaps = 13/232 (5%)
Query: 249 DKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKL 308
D + +K + + + + + P +R + Y+ QV+ S E +K ++L
Sbjct: 299 DSISNRPLKTERSFICADTGALFLEPSKRFQLYK--NQVIKFSGEELSEIKRVSAGHLQL 356
Query: 309 LGFTDASNILRHYYMK-DVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQ 367
LGF S + ++ ++ L+ ++ G S +T AL R+M ++N+ A+ Q
Sbjct: 357 LGFKPLSCLKDYHNLRPSTFLYPSDEGMSGSTCIFIALHRSMVKLNRFAVAFFGSPSRPQ 416
Query: 368 SVVVGVLTPNVSEKINI-PDSFYFNVLPFAEDVREFQFPSFSKFP-VSWQPNEQQQEAAD 425
V + ++ + P LP+A+D+R + P ++ + + Q + A
Sbjct: 417 LVALVAQDEIITAAGQVEPPGMNMLYLPYADDIRHVE--ELHPNPDIAPRATDDQVKKAA 474
Query: 426 NLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSL 477
L+K +DL + NPAL+R Y L+ + +D P D+++
Sbjct: 475 ALMKRIDLKDFSVCQF------ANPALQRHYAVLQALALEEDEMPEVNDETV 520
>gi|449502267|ref|XP_004161593.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent DNA helicase 2
subunit KU70-like [Cucumis sativus]
Length = 625
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 101/232 (43%), Gaps = 13/232 (5%)
Query: 249 DKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKL 308
D + +K + + + + + P +R + Y+ QV+ S E +K ++L
Sbjct: 299 DSISNRPLKTERSFICADTGALFLEPSKRFQLYK--NQVIKFSGEELSEIKRVSAGHLQL 356
Query: 309 LGFTDASNILRHYYMK-DVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQ 367
LGF S + ++ ++ L+ ++ G S +T AL R+M ++N+ A+ Q
Sbjct: 357 LGFKPLSCLKDYHNLRPSTFLYPSDEGMSGSTCIFIALHRSMVKLNRFAVAFFGSPSRPQ 416
Query: 368 SVVVGVLTPNVSEKINI-PDSFYFNVLPFAEDVREFQFPSFSKFP-VSWQPNEQQQEAAD 425
V + ++ + P LP+A+D+R + P ++ + + Q + A
Sbjct: 417 LVALVAQDEIITAAGQVEPPGMNMLYLPYADDIRHVE--ELHPNPDIAPRATDDQVKKAA 474
Query: 426 NLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSL 477
L+K +DL + NPAL+R Y L+ + +D P D+++
Sbjct: 475 ALMKRIDLKDFSVCQF------ANPALQRHYAVLQALALEEDEMPEVNDETV 520
>gi|304316199|ref|YP_003851344.1| Ku protein [Thermoanaerobacterium thermosaccharolyticum DSM 571]
gi|302777701|gb|ADL68260.1| Ku protein [Thermoanaerobacterium thermosaccharolyticum DSM 571]
Length = 269
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 7/121 (5%)
Query: 269 SKVVPPEQRIKGYRYGP-QVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN 327
++ V E+ ++GY Y P + V I + E + K++ +L FTD + I Y+ D
Sbjct: 52 NRQVSDEEIVRGYEYEPGKFVIIDEEDLERIPKSTVKTIDILDFTDLNKIDPIYF--DKT 109
Query: 328 LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPN--VSEKINIP 385
+IA P A V L +MK++N+VA+ R V R Q + V N V E ++ P
Sbjct: 110 YYIA-PDEIGAKPYV-LLRDSMKKLNRVAVARVVIRSKQDLACIRVYNDNYMVLETMHFP 167
Query: 386 D 386
D
Sbjct: 168 D 168
>gi|298711253|emb|CBJ26498.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 170
Score = 44.7 bits (104), Expect = 0.16, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 66/141 (46%), Gaps = 9/141 (6%)
Query: 542 SMESKPV---VTVDKIGDLTPIQDFEAMMSR-----RDCPDWVDKAIEDMKNKIFGLLEN 593
S++ +PV T K+G + P+ DF+AMM+ P+ D A++ M+ I L+
Sbjct: 4 SLKQQPVASSTTTRKVGSIDPVSDFQAMMASAIAGDEGGPELADLAVQQMQAVIHTLVRK 63
Query: 594 SNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKKLSL 653
KAV + ALR + +++ND L + ++ + S ++ +M +K +
Sbjct: 64 GTTSSLRAKAVSCVKALRAASVAHIMGQRYNDFLAVMKAKYQRGDNSDIWEMVMGEKGTW 123
Query: 654 -ISKSEAVDSDITDDEAGSFI 673
I+ + +T + A F+
Sbjct: 124 PITSEDDASLSMTPESAAEFM 144
>gi|429862115|gb|ELA36774.1| ku70 protein [Colletotrichum gloeosporioides Nara gc5]
Length = 649
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 91/203 (44%), Gaps = 14/203 (6%)
Query: 265 VEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI-LRHYYM 323
ED ++ V + K Y++G + V ++ E +++K ++++GF S +
Sbjct: 324 AEDSARTVEKPEFKKAYKFGGEYVHFTTEEQKSLKDFGTPIIRIIGFKPRSMLPFWASVK 383
Query: 324 KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL-----TPNV 378
K +F +E +T +AL + + + K+ + + R ++V ++ + +
Sbjct: 384 KSTFIFPSEEDYVGSTRVFTALWQKLLKYKKIGVAWAITRSNANPILVAIIPSHEQSEDD 443
Query: 379 SEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGK 438
S +P + LPFA+D+RE P + + +Q + +V+ L L +
Sbjct: 444 STTPYLPAGLWLTPLPFADDLREGPEPPADLVRSTNELTDQMRV----IVQQLQLPKA-- 497
Query: 439 GEILQPELTPNPALERFYHHLEL 461
+ P+ PNP+L+ Y L++
Sbjct: 498 --MYNPKKYPNPSLQWHYKILQV 518
>gi|366994446|ref|XP_003676987.1| hypothetical protein NCAS_0F01480 [Naumovozyma castellii CBS 4309]
gi|342302855|emb|CCC70632.1| hypothetical protein NCAS_0F01480 [Naumovozyma castellii CBS 4309]
Length = 625
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 56/141 (39%), Gaps = 11/141 (7%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP--GNS 336
K YRYG V + S + ++ + + GF D + R+Y + IA+ G
Sbjct: 313 KAYRYGADYVVLPSTLQSQLVYETFPGLDIRGFMDMELLPRYYLNSESTFIIADTRLGGL 372
Query: 337 RATVAVSALARAMKEMNKVAIVRCVWRQG---QQSVVVGVLTPNVSEKI------NIPDS 387
+V L + KVA+ R V + Q V+V + + + N +
Sbjct: 373 ADSVTFGVLVDVLLNNRKVAVARYVPKANSEVQMCVLVPLFVAHHDQSFSGEGEENFVRT 432
Query: 388 FYFNVLPFAEDVREFQFPSFS 408
N LPFAED R FP +
Sbjct: 433 LVLNRLPFAEDERVSDFPRLT 453
>gi|285028687|gb|ADC34633.1| DSB repair complex subunit Ku70 [Penicillium decumbens]
Length = 620
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 94/210 (44%), Gaps = 19/210 (9%)
Query: 265 VEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMK 324
+D ++ V + K Y++G + V + E + ++ E ++++GF S + +K
Sbjct: 288 ADDTAQTVEKAEIRKAYKFGGEQVTFTPEELQGLRNFGEPVIRIIGFKPLSTLPIWANVK 347
Query: 325 DVN-LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN 383
+ ++ E +T SAL + + + K+A+V + R+ VV ++ EK++
Sbjct: 348 HPSFIYPCEDDFVGSTRVFSALHQKLLKDGKMALVWFIPRKNSAPVVAAMIA--GEEKLD 405
Query: 384 ------IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSG 437
+P + LPFA+DVR+ S P + +A ++ L L P G
Sbjct: 406 ENNVQKVPPGMWLIPLPFADDVRQNPPSVLSVSP------DHLTDAMRQVIGQLQL-PKG 458
Query: 438 KGEILQPELTPNPALERFYHHLELKSEHQD 467
P+ PNPAL+ Y L+ + +D
Sbjct: 459 ---TYDPQKYPNPALQWHYRILQALALDED 485
>gi|298707354|emb|CBJ29998.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 540
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 84/203 (41%), Gaps = 20/203 (9%)
Query: 290 ISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKD-VNLFIAEPGNSRATVAVSALARA 348
IS E +K K + LLGF + + + ++ L+ E + + A AL A
Sbjct: 244 ISKDEMGTLKGLYPKGLTLLGFRPNNTLRPDFNIRSPYFLYPDEESTTGSAKAFIALHAA 303
Query: 349 MKEMNKVAIVRCVWRQGQQSVVVGVLTPNV-----SEKINIPDSFYFNVLPFAEDVREFQ 403
M + A+ R G +V L P E++ P F VLPFA++VRE +
Sbjct: 304 MVDKRVYALARFTRAAGAAPRMV-ALRPQEEVVEDGEQLQ-PGGFNTVVLPFADEVREAK 361
Query: 404 FPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLE--L 461
P S V + NE AA+ +VK L L E NP L+R Y L+
Sbjct: 362 APQTSDGDVKAEVNEGGVSAAEGVVKALKL------ESFDFRKFENPVLQRHYAALQALA 415
Query: 462 KSEHQDAAPPPLDDSLKKITEPD 484
SE + + P DD T PD
Sbjct: 416 LSEEEISWDPEKDDR----TRPD 434
>gi|353240017|emb|CCA71905.1| related to ATP-dependent DNA helicase II, 70 kDa subunit
[Piriformospora indica DSM 11827]
Length = 679
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 79/193 (40%), Gaps = 37/193 (19%)
Query: 286 QVVPISSAEWEAVKFKP---EKSVKLLGFTDASNI-----LRHYYMKDVNLFIAEPGNSR 337
Q PI + + KF+ E +K+LGF DA + ++H Y L+ +
Sbjct: 392 QKTPIYYTKEDVTKFRTLGMEPGIKILGFKDADTLVFEDNIKHSYF----LYPNDTVYKG 447
Query: 338 ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVG------VLTPNVSEKINIPDSFYFN 391
+T A AL AM K+ + ++R+ VL + +++ P F+
Sbjct: 448 STAAFGALMSAMVTKGKIGLALGLFRRNSSPYFYAMVPQEEVLDEDGAQER--PPGFHMI 505
Query: 392 VLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKM----LDLAPSGKGEILQPELT 447
LPFA+D+R + E A+DNLV+ + KG + P+
Sbjct: 506 PLPFADDIR-----------AAPDAAESSLRASDNLVQAAAAWIKKVRIQKGYV--PDAY 552
Query: 448 PNPALERFYHHLE 460
PNP L FY L+
Sbjct: 553 PNPTLGLFYSQLQ 565
>gi|358342906|dbj|GAA53379.1| cystathionine beta-synthase [Clonorchis sinensis]
Length = 1905
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 74/159 (46%), Gaps = 8/159 (5%)
Query: 160 SGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGDLELSEK 219
+G P +V + +++S+ + F ++ +L +TR ++ ++ D ++ +
Sbjct: 1679 NGNPQFKVHSAQKAIGDLWSQLNGESYTFDEAIPAL-AYFETRAVTQRG-WKVDFQIGDS 1736
Query: 220 MKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIK 279
+ + V + + E + PTL + PST ++ Y + ++ + Q I+
Sbjct: 1737 LSLPVEGFTQVREARPPTLTQLYAACPST------PIRAITTYCTQDENVTELQSTQIIR 1790
Query: 280 GYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNIL 318
G+RYG +VP + + V+ EK L+GFT AS +
Sbjct: 1791 GHRYGNTMVPFTPEDKAVVQPAAEKCRTLIGFTPASTFI 1829
>gi|17552754|ref|NP_497899.1| Protein CKU-80 [Caenorhabditis elegans]
gi|3878947|emb|CAA83623.1| Protein CKU-80 [Caenorhabditis elegans]
Length = 728
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 85/197 (43%), Gaps = 24/197 (12%)
Query: 280 GYRYGPQVVPISSAEWEAVKFKPEK--------SVKLLGFTDASNILRHYYMKDVNLFIA 331
GY +G V+ + E+ K+ +KL+ FT +NIL Y + D +
Sbjct: 318 GYNFGKSVI-MMDPEYLKEKYNDHNFNEGQTGGVLKLIQFTKRANILDSYLL-DASAKTV 375
Query: 332 EPG----NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDS 387
P S AT A +L AM + AI R + ++ +L P+ E+ +
Sbjct: 376 LPALNSPKSGATKATVSLIEAMLSLRVAAICRYTFHAKSHVQLIALL-PHQDEETGV--- 431
Query: 388 FYFNV--LPFAEDVREFQFPSFS---KFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEIL 442
FY LPF++D+R +FP FS + +P Q A D+L+ + L ++
Sbjct: 432 FYLRSVKLPFSDDMRTLKFPKFSFDEEDEDLNKPTVAQLSAVDDLIDCMQLQEDEISSLV 491
Query: 443 QPELTPNPALERFYHHL 459
+ ++ +P L+ H L
Sbjct: 492 EGGMS-DPKLQMQCHFL 507
>gi|317490488|ref|ZP_07948969.1| Ku protein [Eggerthella sp. 1_3_56FAA]
gi|325831541|ref|ZP_08164795.1| Ku protein [Eggerthella sp. HGA1]
gi|316910426|gb|EFV32054.1| Ku protein [Eggerthella sp. 1_3_56FAA]
gi|325486795|gb|EGC89243.1| Ku protein [Eggerthella sp. HGA1]
Length = 274
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 62/122 (50%), Gaps = 7/122 (5%)
Query: 243 DKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRY--GPQVVPISSAEWEAVKF 300
D A ++ A +K K+ D + + PE +KGY+Y G VV + E +A+K
Sbjct: 25 DDAVRFNQLAKDSMKRVRYVKTCPDCKRELKPEDIVKGYQYEKGKYVV-VDDEELDAIKT 83
Query: 301 KPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRC 360
++++K++ F+D + Y+ K + +A+PG + A+ L RAM + K+AI
Sbjct: 84 DADRAMKIVQFSDIDEVPPLYFEKPYQV-VAQPGGEK---ALELLRRAMVDEGKIAIGTT 139
Query: 361 VW 362
V
Sbjct: 140 VL 141
>gi|335428738|ref|ZP_08555648.1| Ku protein [Haloplasma contractile SSD-17B]
gi|335430878|ref|ZP_08557764.1| Ku protein [Haloplasma contractile SSD-17B]
gi|334887418|gb|EGM25750.1| Ku protein [Haloplasma contractile SSD-17B]
gi|334891679|gb|EGM29925.1| Ku protein [Haloplasma contractile SSD-17B]
Length = 255
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 278 IKGYRY-GPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNS 336
IKGY+Y + + ++E +K +K+++++ F DAS I YY D + ++ G
Sbjct: 61 IKGYQYEDNKYITFDDDDFEKIKSNRDKTIQIMQFVDASEIDSIYY--DKSYYVVPEGGE 118
Query: 337 RATVAVSALARAMKEMNKVAIVRCV 361
+ A L RA+ E NKV I + V
Sbjct: 119 K---AFEVLRRALSESNKVGIAKAV 140
>gi|393242090|gb|EJD49609.1| Ku DNA-binding complex, Ku70 subunit [Auricularia delicata
TFB-10046 SS5]
Length = 662
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 78/164 (47%), Gaps = 18/164 (10%)
Query: 303 EKSVKLLGFTDASNILRHYYMKDVNLFI--AEPGNSRATVAVSALARAMKEMNKVAIVRC 360
E +KLLGF D + + +K +LFI E + +T +AL + + + +K A+V
Sbjct: 391 EPGLKLLGFKDRTELRFEDNVKH-SLFIYPNESAFNGSTRTFAALLQVLAKKDKFALVVG 449
Query: 361 VWRQGQQSVVVGVL-TPNVSEKIN---IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQP 416
+ R ++ V +K +P F+ VLPFA+D+R S +
Sbjct: 450 ITRANSSPAFYAMIPQEEVLDKAGAQIVPPGFHLIVLPFADDIRSATVES------AEAA 503
Query: 417 NEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLE 460
+++ ++AA L+ L++ SG P+ PNPAL+ Y L+
Sbjct: 504 SDELKDAARALINKLNVK-SG----YDPKKFPNPALKLHYEQLQ 542
>gi|341896246|gb|EGT52181.1| CBN-CKU-80 protein [Caenorhabditis brenneri]
Length = 779
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 102/240 (42%), Gaps = 40/240 (16%)
Query: 255 EVKVDYEYKSVEDPSKVVPPEQRIK---GYRYGPQVVPIS----SAEWEAVKFKPEKS-- 305
++K+D +Y + K P + IK GY +G V+ + ++ F ++
Sbjct: 278 DIKLDAKYGKTDKTDKNYKPVENIKLMHGYNFGKSVIMMDPEYLKEKYNDHNFNEGQTGG 337
Query: 306 -VKLLGFTDASNI----------------LRHYYMKDVNLFIAEPG----NSRATVAVSA 344
+KL+ FT +N+ + Y+ D + P S AT A A
Sbjct: 338 VLKLIQFTKKANVGLLSDTAQIFSKNNFQILDSYLVDSSAKTVLPSLNAPKSGATKATVA 397
Query: 345 LARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNV--LPFAEDVREF 402
+ +AM ++ VA+ R + + V + L P+ E+ + Y LPF++D+R
Sbjct: 398 IIQAMLDLRVVALCRYTF-HAKSHVQLIALIPHKDEETGV---LYMRSVKLPFSDDMRTL 453
Query: 403 QFPSFS---KFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHL 459
+FP FS S +P Q A D+L+ + L S +++ ++ +P L+ H +
Sbjct: 454 KFPKFSFDDDEVDSNKPTVAQLSAVDDLIDCMQLPESDISSLVEGGMS-DPKLQMQCHFI 512
>gi|320170254|gb|EFW47153.1| ATP-dependent DNA helicase II 70 kDa subunit [Capsaspora owczarzaki
ATCC 30864]
Length = 732
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 91/218 (41%), Gaps = 34/218 (15%)
Query: 278 IKGYR-YGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN-LFIAEPGN 335
IK Y YG + V E ++ + + L+GF + HY +K N ++ E
Sbjct: 442 IKNYFPYGGEKVIFDPTEVREIRRFGQPGLVLMGFKPTDAVKLHYNVKTANFIYPDETVV 501
Query: 336 SRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNV----SEKINI-PDSFYF 390
+T+ AL + + +KVAI R + R V L P + + + + P F+
Sbjct: 502 MGSTLLFHALLMRLADQDKVAICRFIPRINATPRFVA-LVPQLEVFDANHVQLQPPGFHV 560
Query: 391 NVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEA----ADNLVKMLDLAPSGKGEILQPEL 446
LPFA+D+R Q ++ NE ++ A +++K L + P
Sbjct: 561 IYLPFADDLRSLQ----------YEENEMCGKSLIVTASDIIKKLTFS-------FSPWD 603
Query: 447 TPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPD 484
NP L++ Y +LE + +D A D + +PD
Sbjct: 604 FENPNLQKHYRNLEALALGRDVA-----DDFEDNVQPD 636
>gi|320592811|gb|EFX05220.1| dsb repair complex subunit [Grosmannia clavigera kw1407]
Length = 685
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 116/289 (40%), Gaps = 54/289 (18%)
Query: 250 KFATHE-VKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAE------WEAVKFKP 302
K AT E +KVD D ++ V + K Y++G + V + E WE
Sbjct: 328 KLATSETIKVD------SDSTRTVEVGEIKKAYKFGGEFVYFTPEELKGFKTWEFPDGWN 381
Query: 303 EKSVKLLGFTDASNILRHYYMK-DVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCV 361
K ++++GF I +K ++ +E +T SAL + +K+ KVAI V
Sbjct: 382 GKGLRIIGFKPRVLIPSWASVKRSTFIYPSEEDYVGSTRIFSALWQKLKKSEKVAIAWFV 441
Query: 362 WRQGQQSVVVGVLTPN----------------VSEKIN---IPDSFYFNVLPFAEDVREF 402
R V+V V+ N +N +P + LPFAED+R+F
Sbjct: 442 PRINTNPVLVAVIPSNGPDGGSEGDGDGSGDGEKRSVNPSHLPAGLWLYPLPFAEDIRKF 501
Query: 403 QFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELK 462
S + P + E + +NL L P P PNPAL+ Y L++
Sbjct: 502 D-DSRAPLPRPAELTELMKPVVENL-----LLPK---TAYDPAKYPNPALQWHYKILQVL 552
Query: 463 SEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPKLK 511
+ LD+ + K + DPTL AID G + + +LK
Sbjct: 553 A---------LDEEVPKQGD-DPTL--PKYKAIDKRVGGSLAEIKERLK 589
>gi|156407043|ref|XP_001641354.1| predicted protein [Nematostella vectensis]
gi|156228492|gb|EDO49291.1| predicted protein [Nematostella vectensis]
Length = 607
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 106/243 (43%), Gaps = 28/243 (11%)
Query: 249 DKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGY-RYGPQVVPISSAEWEAVKFKPEKSVK 307
D + +V +Y + ++++P + IK Y ++G + + E ++K + +
Sbjct: 286 DSRTNEDCQVHTKYICKDTGAELMPTD--IKFYQKFGGEKIIFEKEEVASMKKFGDPGLL 343
Query: 308 LLGFTDASNILRHYYMKDVN-LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQ 366
L+GF + R Y++K + ++ E + +T SAL + + V I R + R
Sbjct: 344 LMGFKPRVTLKRFYHVKPAHFIYPDEKSITGSTTLFSALLTKCLDRDVVPICRYIPRGSA 403
Query: 367 QSVVVGVLTPNVSEKIN-----IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQ 421
V +L P E + P F+ LPFA+D+R+ K+P + +E Q
Sbjct: 404 APSFVALL-PQEEEYDDSNVQVTPPGFHVIFLPFADDMRKL------KYPKKPEVSEDQI 456
Query: 422 EAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKIT 481
E A +++ L NP L++ ++ LE + +D AP ++D +T
Sbjct: 457 EKAQKIIRKLHFT-------FDSTSFENPTLQKHFNSLEALALDRD-APEEVND----LT 504
Query: 482 EPD 484
PD
Sbjct: 505 VPD 507
>gi|358382641|gb|EHK20312.1| hypothetical protein TRIVIDRAFT_83371 [Trichoderma virens Gv29-8]
Length = 647
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 108/263 (41%), Gaps = 28/263 (10%)
Query: 265 VEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMK 324
ED ++ V ++ K Y++G + V + E + ++ ++++GF I +K
Sbjct: 325 AEDSARTVEKQEIKKAYKFGGEYVYFTPEEQKNLRDFGSPIIRIIGFKKRDMIPAWASVK 384
Query: 325 DVN-LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL-----TPNV 378
+F +E ++ SAL + + +K+ + CV R Q ++ ++ +
Sbjct: 385 KSTFIFPSEEDYIGSSRVFSALWQKLLNDDKIGLAWCVLRSNAQPMIAALIPSREQSDET 444
Query: 379 SEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGK 438
S +P + LP A+D+RE + + S E + +V+ L+L P G
Sbjct: 445 SGTPYLPAGLWIYPLPAADDMREIS--ADRRIDCS----EDLKTKMRVIVQQLNL-PKG- 496
Query: 439 GEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAF 498
I P PNPAL+ Y L+ + ++ P D +TEP AI
Sbjct: 497 --IYNPLKYPNPALQWHYKILQTLALDEEVPEKPED-----LTEP-------KNKAISKR 542
Query: 499 CGQFVIKENPKLKKSTRRFLREK 521
G ++ LK R +R +
Sbjct: 543 AGGYLEDWAETLKDEADRAVRSR 565
>gi|403218628|emb|CCK73118.1| hypothetical protein KNAG_0M02650 [Kazachstania naganishii CBS
8797]
Length = 574
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 101/235 (42%), Gaps = 41/235 (17%)
Query: 266 EDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKS---VKLLGFTDASNILRHYY 322
+D SKV+P YG + +S+ + ++ E+ +K+LGF ++++
Sbjct: 315 KDISKVIP---------YGDVNIELSAEALQQMRASYEEEGPFMKVLGFRSTDLCVKYFN 365
Query: 323 MKDVNLFIA--EPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSE 380
D FI E + +++L R ++ NK AI+ + S + ++ P+ E
Sbjct: 366 NIDKPSFIVPDELQYEGSIKTLASLFRTLRSKNKSAIIWGKPKSNSNSALY-IMVPSHRE 424
Query: 381 KINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLV---KMLDLAPSG 437
N D FY + +PF +++R K P+ N+ Q D L +L
Sbjct: 425 DRN--DGFYMHRIPFLDELR--------KVPIKMVDNDWTQLDNDLLTVTETILKYFNLR 474
Query: 438 KGEILQPELTPNPALERFYHHL--------ELKSEHQDAAPPPL---DDSLKKIT 481
+G I P NP ++ +Y L E+K E D + L DD+LKKI+
Sbjct: 475 QGYI--PSEFKNPGIQNYYKVLHDYILQVEEIKHEGWDFSQEELLRQDDTLKKIS 527
>gi|281311975|dbj|BAI58987.1| Ku70 protein [Colletotrichum higginsianum]
Length = 651
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 90/206 (43%), Gaps = 20/206 (9%)
Query: 265 VEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI-LRHYYM 323
ED ++ V + K Y++G + V + E +++K ++++GF S +
Sbjct: 325 AEDSARTVEKTEFKKAYKFGGEYVHFAPEEQKSLKDFGTPIIRIIGFKPRSMLPFWACVK 384
Query: 324 KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL-----TPNV 378
K +F +E +T SAL + + + KV I + R ++V ++ + +
Sbjct: 385 KSTFIFPSEEDYVGSTRVFSALWQKLLKDQKVGIAWAITRANASPILVAIIPSHEKSEDD 444
Query: 379 SEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNL---VKMLDLAP 435
S +P + LPFA+D+RE P S VS E D + V+ L L
Sbjct: 445 SGTPYLPAGLWLYPLPFADDLREGPEPP-SNLVVS------SNELIDRMRVIVQQLQLPK 497
Query: 436 SGKGEILQPELTPNPALERFYHHLEL 461
+ + P+ PNP+L+ Y L++
Sbjct: 498 A----MFNPKKYPNPSLQWHYKILQV 519
>gi|119479761|ref|XP_001259909.1| DSB repair complex subunit Ku70, putative [Neosartorya fischeri
NRRL 181]
gi|119408063|gb|EAW18012.1| DSB repair complex subunit Ku70, putative [Neosartorya fischeri
NRRL 181]
Length = 654
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 116/259 (44%), Gaps = 39/259 (15%)
Query: 265 VEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI-----LR 319
+D ++ V + K Y++G V + E +A++ + ++++GF S + ++
Sbjct: 328 ADDTARTVEKSEIRKAYKFGNDQVSFTPEEQKALRHFGDPVIRIIGFKPLSALPFWANVK 387
Query: 320 HYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVS 379
H + ++ +E +T SAL + + + +K+A+V + R+ V+ ++
Sbjct: 388 HPFF----IYPSEEDYVGSTRVFSALHQKLLKDHKMALVWFIPRKNAAPVLGAMIAGE-- 441
Query: 380 EKIN------IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDL 433
EK++ P + LP+A+DVR Q P + V+ +P Q +V+ L L
Sbjct: 442 EKVDENGVQKFPPGMWIIPLPYADDVR--QNPEMT-LNVAPEPLIDQMR---TIVQQLQL 495
Query: 434 APSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQS 493
+ +P+ PNP+L+ Y L+ + +D P D ++ K +
Sbjct: 496 PKAS----YEPQKYPNPSLQWHYRILQALALDEDLPEKPEDKTIPKYRQ----------- 540
Query: 494 AIDAFCGQFVIKENPKLKK 512
ID G++V+ +L+K
Sbjct: 541 -IDKRAGEYVLSWADELEK 558
>gi|310795234|gb|EFQ30695.1| ATP-dependent DNA helicase II [Glomerella graminicola M1.001]
Length = 652
Score = 43.5 bits (101), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 91/204 (44%), Gaps = 16/204 (7%)
Query: 265 VEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHY--Y 322
ED ++ V + K Y++G + V + E +++K ++++GF S IL +
Sbjct: 326 AEDSARTVEKTEFKKAYKFGGEFVHFAPEEQKSLKAFGSPIIRIIGFKPRS-ILPFWASV 384
Query: 323 MKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL-----TPN 377
K +F +E +T SAL + + K+ I + R ++ V+ + +
Sbjct: 385 KKSTFIFPSEEDYVGSTRVFSALWQKLLNDKKIGIAWAITRSNASPILAAVIPSHEKSED 444
Query: 378 VSEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSG 437
S +P + LPFA+D+RE P S +S + + + +V+ L L +
Sbjct: 445 DSGTPYLPAGLWLYPLPFADDLREGPEPP-SNLVIS---SNELTDRMRVIVQQLQLPKA- 499
Query: 438 KGEILQPELTPNPALERFYHHLEL 461
+ P+ PNP+L+ Y L++
Sbjct: 500 ---MFNPKKYPNPSLQWHYKILQV 520
>gi|380485661|emb|CCF39216.1| ATP-dependent DNA helicase II [Colletotrichum higginsianum]
Length = 498
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 90/206 (43%), Gaps = 20/206 (9%)
Query: 265 VEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI-LRHYYM 323
ED ++ V + K Y++G + V + E +++K ++++GF S +
Sbjct: 172 AEDSARTVEKTEFKKAYKFGGEYVHFAPEEQKSLKDFGTPIIRIIGFKPRSMLPFWACVK 231
Query: 324 KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL-----TPNV 378
K +F +E +T SAL + + + KV I + R ++V ++ + +
Sbjct: 232 KSTFIFPSEEDYVGSTRVFSALWQKLLKDQKVGIAWAITRANASPILVAIIPSHEKSEDD 291
Query: 379 SEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNL---VKMLDLAP 435
S +P + LPFA+D+RE P S VS E D + V+ L L
Sbjct: 292 SGTPYLPAGLWLYPLPFADDLREGPEPP-SNLVVS------SNELIDRMRVIVQQLQLPK 344
Query: 436 SGKGEILQPELTPNPALERFYHHLEL 461
+ + P+ PNP+L+ Y L++
Sbjct: 345 A----MFNPKKYPNPSLQWHYKILQV 366
>gi|269957016|ref|YP_003326805.1| Ku protein [Xylanimonas cellulosilytica DSM 15894]
gi|269305697|gb|ACZ31247.1| Ku protein [Xylanimonas cellulosilytica DSM 15894]
Length = 274
Score = 43.1 bits (100), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 80/195 (41%), Gaps = 43/195 (22%)
Query: 269 SKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI-----LRHYYM 323
KVVP E K Y G V ++ + + + ++ ++++ F + I R YY+
Sbjct: 52 GKVVPYEHIDKAYDDGEHTVVLTKDDLSGLPAERDREIEVVEFVPSDQIDPIMLDRTYYL 111
Query: 324 KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN 383
EP +S++T A L R ++E ++ A+V+ RQ + + V
Sbjct: 112 --------EP-DSKSTKAYVLLRRTLEETDRTAVVKFALRQRTRLAALRVR--------- 153
Query: 384 IPDSFYFNVLPFAEDVREFQFPSF------------------SKFPVSWQPNEQQQEAAD 425
D L +A++VRE +FP+ + F + P E + E
Sbjct: 154 -GDVLVLQTLLWADEVREAEFPALDETVKVSAKELTMSQQLVASFEADFAPGEFEDEYQA 212
Query: 426 NLVKMLDLAPSGKGE 440
L K++D A KGE
Sbjct: 213 QLRKLID-AKIEKGE 226
>gi|302881903|ref|XP_003039862.1| hypothetical protein NECHADRAFT_85723 [Nectria haematococca mpVI
77-13-4]
gi|256720729|gb|EEU34149.1| hypothetical protein NECHADRAFT_85723 [Nectria haematococca mpVI
77-13-4]
Length = 1793
Score = 43.1 bits (100), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 70/337 (20%), Positives = 144/337 (42%), Gaps = 35/337 (10%)
Query: 265 VEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI-LRHYYM 323
ED ++ V + K Y++G + V + E +++K ++++GF S + +
Sbjct: 321 AEDSARTVEKGETKKAYKFGGEYVYFTPDEQKSLKDFGSPIIRIIGFKSRSQLPIWASVK 380
Query: 324 KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL-----TPNV 378
K +F +E +T +AL + + + +K+ + C+ R Q ++ ++ + +
Sbjct: 381 KSTFIFPSEEDFVGSTRVFTALWQKLLKDDKIGLAWCITRANAQPILAAIIPSRERSDDE 440
Query: 379 SEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGK 438
S +P + LPF +D+R P + +++ + +V+ L L +
Sbjct: 441 SGTPYLPAGLWIYPLPFLDDLRSINPPG-----EVVRSSDELKTQMRTIVQQLQLPKA-- 493
Query: 439 GEILQPELTPNPALERFY---HHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAI 495
+ P PNPAL+ Y L L+ E + A + K I++ L + +
Sbjct: 494 --MYNPSKYPNPALQWHYKILQALALEEEVPEKAEDTTEPKFKAISKRAGGYLEDWSETL 551
Query: 496 DAFCGQFVIKENPK-------LKKSTR-RFLREKPSGSDEPNGDGSVSDAQAVNSMESKP 547
+ G+ ++ K +K + R R EKPSGS S+S +Q ++ES
Sbjct: 552 EGEAGRVSSAKSTKREADDDDVKPTKRSRGSSEKPSGS-------SLSTSQLKTAIESGG 604
Query: 548 V--VTVDKIGDLTPIQDFEAMMSRRDCPDWVDKAIED 582
+ +TV ++ DL + + D + V++ + D
Sbjct: 605 ITKMTVVQLRDLLGAKGLSTAGRKMDLIERVEQVVMD 641
>gi|440633573|gb|ELR03492.1| hypothetical protein GMDG_01243 [Geomyces destructans 20631-21]
Length = 644
Score = 43.1 bits (100), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 55/113 (48%), Gaps = 16/113 (14%)
Query: 5 REALLLLLDVSPSMHSVLPDVE--------------KLCSRLIQKKLIYGKNHEVGVILF 50
++A+L ++VSPSM + P + K +++Q+++I +G++LF
Sbjct: 31 KDAILFAIEVSPSMLTHPPASDSKKADTDSPAAAALKCAYQIMQQRIISNPKDMIGILLF 90
Query: 51 GTEETENELTKEVGG--YEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDYMLI 101
GT E++ G Y H+ +L D+ V V++LK L + A +L+
Sbjct: 91 GTAESKGPEDNAASGIAYPHIYLLTDLDVPAASDVKALKELVEDEEAAKEVLV 143
>gi|112362565|emb|CAL36029.1| HDF1 protein [Saccharomyces bayanus]
Length = 602
Score = 43.1 bits (100), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 108/237 (45%), Gaps = 31/237 (13%)
Query: 278 IKGYRYGPQVVPISSAEWEAV---KFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 334
+K Y YG + +S + + + + + ++++GF ++ + ++ + + FI P
Sbjct: 332 VKVYPYGDLDINLSEKQNQVIMEAYTQKDGFLRIIGFRSPTSSIHYFNNIEKSTFIV-PD 390
Query: 335 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSV--VVGVLTPNVSEKINIPDSFYFNV 392
++ ++ LA +K + K V VW + + + + VL+P+ E+ N + FY
Sbjct: 391 EAKYEGSIRTLASLLKTLRKKDKVAIVWGKLKSNSHPSLFVLSPSSIEEYN--EGFYLYR 448
Query: 393 LPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEI---LQPELTPN 449
+PF +++R +FPS +S+ E+ + DN+ K + + G + P N
Sbjct: 449 IPFLDEIR--KFPSL----LSYDSGEKHELEYDNM-KRISQSIMGYFNLRDGYNPSDFKN 501
Query: 450 PALERFYH-------HLELKSEHQDAAPPPL------DDSLKKITEPDPTLLAESQS 493
P+L+R + +E+ E + + + DDSL+K+ +L +S
Sbjct: 502 PSLQRHFKVLHDYLLQIEVNIEENETSEARINRVIHEDDSLRKLYHIRNKILESEKS 558
>gi|373956335|ref|ZP_09616295.1| DNA repair protein [Mucilaginibacter paludis DSM 18603]
gi|373892935|gb|EHQ28832.1| DNA repair protein [Mucilaginibacter paludis DSM 18603]
Length = 256
Score = 42.7 bits (99), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 54/106 (50%), Gaps = 4/106 (3%)
Query: 266 EDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKD 325
E+ K VP ++ +KGY+Y V I A++EA + K +++ F D + YY +
Sbjct: 49 ENTKKEVPYDKIVKGYKYEDDYVIIEDADFEAAAPEKSKVIEIENFVDMDAVNPMYY--E 106
Query: 326 VNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVV 371
+ +I EP ++ A + L A+K+ +K + R V R + +V
Sbjct: 107 TSYYI-EP-ETKNNKAYALLLEALKKSDKAGLARFVLRSTESLCIV 150
>gi|4630797|dbj|BAA76953.1| human Ku70 autoantigen homologue [Xenopus laevis]
Length = 611
Score = 42.7 bits (99), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 106/497 (21%), Positives = 185/497 (37%), Gaps = 82/497 (16%)
Query: 5 REALLLLLDVSPSMHSVLP------DVEKLCSRLIQKKLIYGKNHEV-GVILFGTEETEN 57
R++L+ L+D S M + D+ C R + I +H++ V+ FGT E+ N
Sbjct: 34 RDSLIFLVDASKPMFESIDGELTPFDLTLQCIRSVYASKIISSDHDLLSVVFFGTRESTN 93
Query: 58 ELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGT----------CAGDYMLIKKYGET 107
++H+ VL D+ + L + C GD+ L GE
Sbjct: 94 -----CDPFKHLCVLHDLDTPGAKRILDLDKYKEEKGRALFCDTIGCGGDFSL----GEA 144
Query: 108 Y-------------KGKKHLCLITDALCP-LKDPDVGTKEDQVSTIARQMVAFGLRMKNI 153
K + L T+ P DP + + + M F L + ++
Sbjct: 145 LWLCSNLFSNVKVKMSHKRIILFTNEDNPHANDPAKAKQARAKAEDLKDMGIF-LDLMHL 203
Query: 154 VVRASLSGEPHMRVII---ENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIF 210
R I+ E+++L+ F K+S K + + ARK R +S
Sbjct: 204 EKPGGFDISLFYRDIVNTAEDEDLVVQF--KASEKLDDLLKKVRAKEARK-RALS----- 255
Query: 211 RGDLELSEKMKIKVWVYKKTGEE-KFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPS 269
R +L+L + + V VY + K PT++ Y + + VK S
Sbjct: 256 RLNLKLGPDVGLTVGVYNLVQKAVKPPTVRLYRE--------SNEPVKTKTRIFHSNTGS 307
Query: 270 KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLF 329
++P + + + YG + + + E E +K E + L+GF S + +H++ +
Sbjct: 308 LLLPSDTK-RSQTYGNRQIVLEKDETEQLKRFDEPGLVLIGFKPISCLKKHHFTRPAQFI 366
Query: 330 IAEPG-NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSE-----KIN 383
E + +T +AL +AI R R+ V L P E +
Sbjct: 367 YPEESIITGSTTLFNALLTRCLARQVMAICRYTPRRNTPPRFVA-LVPQDEELDDQNMQS 425
Query: 384 IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQ 443
P F LPFA+D+R+ P NE+Q + +V L +
Sbjct: 426 APSGFNLVCLPFADDIRKLDTPE------KITANEEQVDKMKEIVHKLRFN-------FR 472
Query: 444 PELTPNPALERFYHHLE 460
+ NP L++ + +LE
Sbjct: 473 SDSFENPVLQQHFRNLE 489
>gi|112362567|emb|CAL36028.1| HDF1 protein [Saccharomyces bayanus]
gi|112362571|emb|CAL36026.1| HDF1 protein [Saccharomyces bayanus]
Length = 602
Score = 42.7 bits (99), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 108/237 (45%), Gaps = 31/237 (13%)
Query: 278 IKGYRYGPQVVPISSAEWEAV---KFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 334
+K Y YG + +S + + + + + ++++GF ++ + ++ + + FI P
Sbjct: 332 VKVYPYGDLDINLSEKQNQVIMEAYTQKDGFLRIIGFRSPTSSIHYFNNIEKSTFIV-PD 390
Query: 335 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSV--VVGVLTPNVSEKINIPDSFYFNV 392
++ ++ LA +K + K V VW + + + + VL+P+ E+ N + FY
Sbjct: 391 EAKYEGSIRTLASLLKTLRKKDKVAIVWGKLKSNSHPSLFVLSPSSIEEYN--EGFYLYR 448
Query: 393 LPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEI---LQPELTPN 449
+PF +++R +FPS +S+ E+ + DN+ K + + G + P N
Sbjct: 449 IPFLDEIR--KFPSL----LSYDSGEKHEVDYDNM-KRISQSIMGYFNLRDGYNPSDFKN 501
Query: 450 PALERFYH-------HLELKSEHQDAAPPPL------DDSLKKITEPDPTLLAESQS 493
P+L+R + +E+ E + + + DDSL+K+ +L +S
Sbjct: 502 PSLQRHFKVLHDYLLQIEVNIEENETSEARINRVIHEDDSLRKLYHIRNKILESEKS 558
>gi|148265477|ref|YP_001232183.1| Ku domain-containing protein [Geobacter uraniireducens Rf4]
gi|269933390|sp|A5G742.1|Y3454_GEOUR RecName: Full=Probable DNA repair protein Gura_3454
gi|146398977|gb|ABQ27610.1| Ku domain protein [Geobacter uraniireducens Rf4]
Length = 261
Score = 42.7 bits (99), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 9/111 (8%)
Query: 270 KVVPPEQRIKGYRYGP-QVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNL 328
K+VPP++ I+GY GP + +PI+ E E+V + ++++++ F D + + YY L
Sbjct: 55 KMVPPDEIIRGYEIGPDRYLPITDEELESVSPERSRTIEIVEFIDMNEVDPIYYDHPYYL 114
Query: 329 FIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVV----GVLT 375
+ G A L M+ NK + + V + + V V G LT
Sbjct: 115 VPLKGGEK----AYRLLVEVMRRTNKAGLAKFVLAEREYLVAVKSTEGALT 161
>gi|91082987|ref|XP_974250.1| PREDICTED: similar to ku P80 DNA helicase [Tribolium castaneum]
gi|270007031|gb|EFA03479.1| hypothetical protein TcasGA2_TC013478 [Tribolium castaneum]
Length = 513
Score = 42.7 bits (99), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 66/146 (45%), Gaps = 18/146 (12%)
Query: 258 VDYEYKSVE-DPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASN 316
+D E +S+E D S+V I G + VP+++ ++ +S +L FTDA+N
Sbjct: 266 IDAEDESIEFDASEV------ISGVSRHGKFVPVNNKMFQV---SSSRSFSVLCFTDAAN 316
Query: 317 ILRHYYMKDVNLFIAEPGNS-RATVAVSALARAMKEMNKVAIVRCVWRQGQ-QSVVVGVL 374
+ H M+ + P S A + L + + NK I R V+ +VV V
Sbjct: 317 VPEHL-MRGGGCYSVLPNASLEKNDAFNCLIDCLAQQNKYVIARRVYNNNYVPKIVVLVP 375
Query: 375 TPNVSEKINIPDSFYFNVLPFAEDVR 400
P+ + P F LPFA+DVR
Sbjct: 376 KPDYN-----PKCFVLTALPFADDVR 396
>gi|293400606|ref|ZP_06644751.1| Ku protein [Erysipelotrichaceae bacterium 5_2_54FAA]
gi|373452080|ref|ZP_09543998.1| Ku protein [Eubacterium sp. 3_1_31]
gi|291305632|gb|EFE46876.1| Ku protein [Erysipelotrichaceae bacterium 5_2_54FAA]
gi|371967512|gb|EHO84983.1| Ku protein [Eubacterium sp. 3_1_31]
Length = 264
Score = 42.7 bits (99), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 73/138 (52%), Gaps = 11/138 (7%)
Query: 253 THEVKVDYEYKSVEDPSKVVPPEQRIKGYRY-GPQVVPISSAEWEAVKFKPEKSVKLLGF 311
THE +V Y+ K + K + E +KGY+Y + V +++ E E +K + ++++++ F
Sbjct: 38 THE-RVKYK-KYCPNCDKELKSEDIVKGYQYEKDKYVIMTNDEIEKLKVEKDRTIQIQHF 95
Query: 312 TDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVV 371
T +NI YY K+ + A P A A L +AM+E N VA+ + V G + ++
Sbjct: 96 TSLANINDLYYEKN---YYAVP-EKHAEKAYELLRKAMQEENVVAVAKTVI--GTKETLL 149
Query: 372 GVLTPNVSEKINIPDSFY 389
L P+ E+I + FY
Sbjct: 150 A-LCPS-DEEIIVKTLFY 165
>gi|388583769|gb|EIM24070.1| ATP-dependent DNA helicase ii [Wallemia sebi CBS 633.66]
Length = 653
Score = 42.7 bits (99), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 57/118 (48%), Gaps = 19/118 (16%)
Query: 4 TREALLLLLDVSPSMHSVLPDVE----------------KLCSRLIQKKLIYGKNHEVGV 47
TR+A L ++D + M P + R +++K + VGV
Sbjct: 23 TRDASLFVIDAAAGMQEYPPSQDPNDRIDEEMPLLHRTFDAILRCLKRKAFNSSDDLVGV 82
Query: 48 ILFGTEETENELTKEVGGY-EHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDYMLIKKY 104
I++ TEET+ + KE EHV LQ I+ ++G+ +++LK L G+ A +L +K+
Sbjct: 83 IIYNTEETKPD--KEGSDVKEHVYCLQPIEQLNGNNIRNLKKLVDGSRADPELLSRKF 138
>gi|257791350|ref|YP_003181956.1| Ku protein [Eggerthella lenta DSM 2243]
gi|257475247|gb|ACV55567.1| Ku protein [Eggerthella lenta DSM 2243]
Length = 274
Score = 42.7 bits (99), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 61/122 (50%), Gaps = 7/122 (5%)
Query: 243 DKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRY--GPQVVPISSAEWEAVKF 300
D A ++ A +K K+ D + + PE +KGY+Y G VV + E + +K
Sbjct: 25 DDAVRFNQLAKDSMKRVRYVKTCPDCKRELKPEDIVKGYQYEKGKYVV-VDDEELDVIKT 83
Query: 301 KPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRC 360
++++K++ F+D + Y+ K + +A+PG + A+ L RAM + K+AI
Sbjct: 84 DADRAMKIVQFSDIDEVPPLYFEKPYQV-VAQPGGEK---ALELLRRAMVDEGKIAIGTT 139
Query: 361 VW 362
V
Sbjct: 140 VL 141
>gi|121713328|ref|XP_001274275.1| DSB repair complex subunit Ku70, putative [Aspergillus clavatus
NRRL 1]
gi|119402428|gb|EAW12849.1| DSB repair complex subunit Ku70, putative [Aspergillus clavatus
NRRL 1]
Length = 654
Score = 42.7 bits (99), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 114/259 (44%), Gaps = 39/259 (15%)
Query: 265 VEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI-----LR 319
+D ++ V + K Y++G + + + E +A++ + ++++GF S + ++
Sbjct: 328 ADDTARTVEKSEIRKAYKFGNEQISFTPEEQKALRNFGDPVIRIIGFKPLSALPFWANVK 387
Query: 320 HYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVS 379
H + ++ +E +T SAL + + + KV +V + R+ + V+G L
Sbjct: 388 HPFF----IYPSEEDYVGSTRVFSALHQKLLKDQKVGLVWFIPRKNA-APVLGALIAG-E 441
Query: 380 EKIN------IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDL 433
EK++ P + LPFA+DVR+ S + P E + +++ L L
Sbjct: 442 EKVDENDVQKFPPGMWIIPLPFADDVRQNPETSLNVAP------EPLIDQMRTIIQQLQL 495
Query: 434 APSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQS 493
+ + +P+ PNP+L+ Y L+ + +D P D ++ K +
Sbjct: 496 PKA----MYEPQKYPNPSLQWHYRILQALALDEDLPEKPEDKTVPKYRQ----------- 540
Query: 494 AIDAFCGQFVIKENPKLKK 512
ID G +V+ +L+K
Sbjct: 541 -IDKRAGDYVLSWADELEK 558
>gi|378730608|gb|EHY57067.1| ATP-dependent DNA helicase 2 subunit 1 [Exophiala dermatitidis
NIH/UT8656]
Length = 681
Score = 42.4 bits (98), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 113/267 (42%), Gaps = 36/267 (13%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSR 337
K Y +G Q + S E + ++ + ++++GF S + +K+ ++ +E
Sbjct: 360 KAYTFGGQQITFSDEEVKQLRNFGDPVIRIIGFKPMSRLPLWANIKNSTFIYPSEEDYVG 419
Query: 338 ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL----TPNVSEKINI--------P 385
+T SAL + + + + V R+ V+ ++ + EK N P
Sbjct: 420 STRVYSALYQKLLKDKLFGLTWFVPRRNAVPVMAAMIPTLPAEALDEKANTAGNSPTGAP 479
Query: 386 DSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPE 445
+ LPFA+DVR+ P+ + P+ P+E +A ++++ L+L P G I P
Sbjct: 480 QGLHLVPLPFADDVRQ-NPPTTHEHPL-LAPDELV-DAMRHIIQQLNL-PKG---IYDPS 532
Query: 446 LTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIK 505
PNP+L+ Y L+ + +D P D ++ K + ID G I+
Sbjct: 533 KYPNPSLQWHYRILQALALDEDIPEKPEDKTIPKYKQ------------IDKRVGNEAIE 580
Query: 506 ENPKLKKSTRRFLREK----PSGSDEP 528
L K+ + + E P+GS P
Sbjct: 581 WGSILDKAYKHYHAENPDAVPTGSKRP 607
>gi|112362569|emb|CAL36027.1| HDF1 protein [Saccharomyces bayanus]
Length = 581
Score = 42.4 bits (98), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 108/237 (45%), Gaps = 31/237 (13%)
Query: 278 IKGYRYGPQVVPISSAEWEAV---KFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 334
+K Y YG + +S + + + + + ++++GF ++ + ++ + + FI P
Sbjct: 332 VKVYPYGDLDINLSEKQNQVIMEAYTQKDGFLRIIGFRSPTSSIHYFNNIEKSTFIV-PD 390
Query: 335 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSV--VVGVLTPNVSEKINIPDSFYFNV 392
++ ++ LA +K + K V VW + + + + VL+P+ E+ N + FY
Sbjct: 391 EAKYEGSIRTLASLLKTLRKKDKVAIVWGKLKSNSHPSLFVLSPSSIEEYN--EGFYLYR 448
Query: 393 LPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEI---LQPELTPN 449
+PF +++R +FPS +S+ E+ + DN+ K + + G + P N
Sbjct: 449 IPFLDEIR--KFPSL----LSYDSGEKHELDYDNM-KRISQSIMGYFNLRDGYNPSDFKN 501
Query: 450 PALERFYH-------HLELKSEHQDAAPPPL------DDSLKKITEPDPTLLAESQS 493
P+L+R + +E+ E + + + DDSL+K+ +L +S
Sbjct: 502 PSLQRHFKVLHDYLLQIEVNIEENETSEARINRVIHEDDSLRKLYHIRNKILESEKS 558
>gi|307206892|gb|EFN84738.1| Protein Ku70 [Harpegnathos saltator]
Length = 540
Score = 42.4 bits (98), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 13/100 (13%)
Query: 5 REALLLLLDVSPSMHSVLPDVE--------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
REA L +D + M P+ + KL +++++KL + +GVILFGT++ +
Sbjct: 27 REATLFAVDATQQMFKEDPETKLSYIHKFFKLYKQILRQKLAWSMQDWMGVILFGTDQKD 86
Query: 57 NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAG 96
+ +EH++ LQ + VV +Q ++ L + G
Sbjct: 87 AD-----SYWEHIQTLQQLGVVTLDDLQCIRKLSKSNVKG 121
>gi|6225597|sp|Q26228.1|KU70_RHIAP RecName: Full=ATP-dependent DNA helicase 2 subunit 1; AltName:
Full=ATP-dependent DNA helicase II 70 kDa subunit;
AltName: Full=ATP-dependent DNA helicase II subunit
Ku70; AltName: Full=Ku autoantigen protein p70 homolog
gi|1063592|gb|AAC41612.1| ku autoantigen p70 homologue [Rhipicephalus appendiculatus]
gi|1587652|prf||2207188A DNA helicase II:SUBUNIT=70kD
Length = 600
Score = 42.4 bits (98), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 100/481 (20%), Positives = 179/481 (37%), Gaps = 66/481 (13%)
Query: 45 VGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDYMLIKKY 104
VG+ILFGT++ N +++V VLQD++ V L+ L G ++Y
Sbjct: 72 VGIILFGTDKDNNP-----NRFKNVYVLQDLESPGAESVLKLEKL---IADGPKKFKQEY 123
Query: 105 G------------------ETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAF 146
G ++ G++ + ++T+ P K G +D+ A+ ++
Sbjct: 124 GHGNVNMADVLWTCALMFSKSRAGQRRVLVLTNQDDPHKGS--GDLDDKAVVKAKDLLQS 181
Query: 147 GLRMKNIVVRASLSGEPHMRVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISP 206
G+ + +V G+ R I NL+ D L + +D
Sbjct: 182 GIELD--LVHLKPPGDKKFRPQILYKNLVTDKENYEDGFPEASDKMEELLLRVRMKDHKK 239
Query: 207 VTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFA--THEVKVDYEYKS 264
+ L ++K+ V +Y PT K P+T + A +E +
Sbjct: 240 RRLMSLPFWLGPEVKMSVSLYNLVR----PTGK------PATTRLARDNNEELLSRRITY 289
Query: 265 VEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMK 324
D ++ + P K YG + E + +K ++LLGF S + + +++
Sbjct: 290 AMDSAEALMPGDISKTQEYGGRKAYFDICEVKQIKSMAPPGLQLLGFKPLSYLEKQPHVR 349
Query: 325 DVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVW--RQGQQSVVVGVLTPNVSEKI 382
+ + G+ R + + A ++VA + C W R Q +V +L
Sbjct: 350 PSHFVYPDEGSVRGSTRLFAALLQSCLRHRVAPI-CFWISRAAQAPKLVYLLAQEEERDP 408
Query: 383 N----IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGK 438
+ +P F+ LPF++D R Q E +A LV +
Sbjct: 409 HGLQMVPPGFHVVQLPFSDDRRRLQ-----------ALQEGTTKATPGLVALAREMAEKL 457
Query: 439 GEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEPD-PTLLAESQSAIDA 497
P+ NP L+ F+ LE + +D A P K T PD + A++ +DA
Sbjct: 458 RFTYHPDKFENPELQGFWSCLEALALDRDDAEHP-----KDYTRPDHEKMKAKAGEEMDA 512
Query: 498 F 498
F
Sbjct: 513 F 513
>gi|322795604|gb|EFZ18283.1| hypothetical protein SINV_00939 [Solenopsis invicta]
Length = 536
Score = 42.4 bits (98), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 58/107 (54%), Gaps = 14/107 (13%)
Query: 4 TREALLLLLDVSPSMHSV-----LPDVEK---LCSRLIQKKLIYGKNHEVGVILFGTEET 55
REA L L+D + M + L ++K L +++++KL + +GV+LFGTEE+
Sbjct: 24 VREATLFLVDTTQKMFEIELESKLSHIQKFFKLYKQILRQKLAWSMKDWMGVVLFGTEES 83
Query: 56 ENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDYMLIK 102
+ L ++++++L ++++V +Q ++ L + DY +K
Sbjct: 84 DVNL-----AWKNIQILHELRIVTLDDLQKIRKLTKNNLK-DYQSMK 124
>gi|38112388|gb|AAR11280.1| Ku autoantigen [Macaca mulatta]
Length = 138
Score = 42.4 bits (98), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 58/104 (55%), Gaps = 4/104 (3%)
Query: 579 AIEDMKNKIFGLLE---NSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICR 635
+ E+ N++ +E ++NE + K+++ + A R+ I E ++FN+ L+ + +
Sbjct: 14 SFEEASNQLINHIEQFLDTNETPYFMKSMDCIRAFREEAIKFSEEQRFNNFLKALREKVE 73
Query: 636 KRNFSTFFDFLMSKKLSLISKSEAVDSDITDDEAGSFIV-KSQP 678
+ + F++ ++ ++LI+K EA S +T DEA F+ K +P
Sbjct: 74 IKQLNHFWEIVVQDGITLITKEEASGSSVTADEAKKFLAPKDKP 117
>gi|255561040|ref|XP_002521532.1| ku P70 DNA helicase, putative [Ricinus communis]
gi|223539210|gb|EEF40803.1| ku P70 DNA helicase, putative [Ricinus communis]
Length = 626
Score = 42.4 bits (98), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 89/218 (40%), Gaps = 26/218 (11%)
Query: 267 DPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDV 326
+P+K+ P Y + + S E +K ++LLGF S LR Y+
Sbjct: 322 EPTKLSHP--------YKNENIKFSVEELAEIKRISTGHLRLLGFKPLS-CLRDYHNLRP 372
Query: 327 NLFIAEPGNSRATVAVS---ALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN 383
+ F+ P + + S AL R+M +N+ A+ + V + VS
Sbjct: 373 STFVF-PSDKEVIGSTSIFIALHRSMLRLNRFAVAFYGGSSHPRLVALVAQDEIVSAGGQ 431
Query: 384 I-PDSFYFNVLPFAEDVR---EFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKG 439
I P + LP+++DVR EF S P N Q + A L+K +DL
Sbjct: 432 IEPPGMHMIYLPYSDDVRHIEEFHSESNVGLP---HANGDQTKKAAGLIKRIDLKDFSVC 488
Query: 440 EILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSL 477
+ NPAL+R Y L+ + +D P D++L
Sbjct: 489 QF------ANPALQRHYAVLQALALEEDEMPESKDETL 520
>gi|206598192|gb|ACI15997.1| KU70 protein [Bodo saltans]
Length = 778
Score = 42.4 bits (98), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 83/204 (40%), Gaps = 24/204 (11%)
Query: 304 KSVKLLGFTDASNILRHYYMKDVNLFI----AEPGNSRATVAVSALARAMKEMNKVAIVR 359
+ +LGF + + +R Y + F+ + G A L R + NKVAI
Sbjct: 497 RGFTILGFKKSEDAIRFKYNVARSGFLHCTTQKGGGQGALKFFVQLHRTLSTQNKVAIAE 556
Query: 360 CVWRQGQQSVVVGVLTPNVSEKINIPDS-----FYFNVLPFAEDVREFQFPSFSKFPVSW 414
V R +V +L + + DS F+ +P+A+DVR F P K P
Sbjct: 557 FVSRDNVAPRLVALLPSKLLHDHPMMDSVTGLGFHLIQIPYADDVRSFH-P--RKQPAEA 613
Query: 415 QPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLD 474
QP + Q A +++ L + NPAL+R Y L+ + D AP +D
Sbjct: 614 QPTDDQITKAKRVIRKLQVE-------YDVNAIANPALQRQYKILQ-QLALIDPAPVQVD 665
Query: 475 DSLKKITEPDPTLLAESQSAIDAF 498
D +T PD +A+ + F
Sbjct: 666 D----LTLPDVEGMAKIAPTLQEF 685
>gi|342870008|gb|EGU73367.1| hypothetical protein FOXB_16128 [Fusarium oxysporum Fo5176]
Length = 644
Score = 42.4 bits (98), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 97/225 (43%), Gaps = 20/225 (8%)
Query: 265 VEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI-LRHYYM 323
ED ++ V + K Y++G + V S E +++K ++++GF S + +
Sbjct: 321 AEDSTRTVEKAEIKKAYKFGGEYVYFSPDEQKSLKDFGSPIIRIIGFKPRSLLPVWASTK 380
Query: 324 KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKIN 383
K +F +E +T +AL + + + +K+ + C+ R Q ++ ++ +
Sbjct: 381 KSTFIFPSEEDYVGSTRVFTALWQKLLKDDKMGVAWCITRANAQPMLAAIIPSRERSDAD 440
Query: 384 -----IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGK 438
+P + LPF +D+R PS S + Q + +++ L L +
Sbjct: 441 SGTPYLPAGLWIYPLPFQDDLRNINPPS-EVLRSSGELTTQMR----TIIQQLQLPKA-- 493
Query: 439 GEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKKITEP 483
+ P PNPAL+ Y L+ + ++ P DD+ TEP
Sbjct: 494 --MYDPLKYPNPALQWHYRILQALALEEE-VPEKADDA----TEP 531
>gi|151945992|gb|EDN64224.1| DNA binding protein [Saccharomyces cerevisiae YJM789]
Length = 602
Score = 42.4 bits (98), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 100/221 (45%), Gaps = 25/221 (11%)
Query: 278 IKGYRYGPQVVPISSAEWEAV---KFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 334
+K Y YG + +S ++ + V + + +K++GF +S + ++ D + FI P
Sbjct: 332 VKVYPYGDLDINLSDSQDQIVMEAYTQKDAFLKIIGFRSSSKSIHYFNNIDKSSFIV-PN 390
Query: 335 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLP 394
++ ++ LA +K + K + +W + + + + T + S + + FY +P
Sbjct: 391 EAKYEGSIRTLASLLKILRKKDKIAILWGKLKSNSHPSLYTLSPSSVKDYNEGFYLYRVP 450
Query: 395 FAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD--LAPSGKGEILQPELTPNPAL 452
F +++R +FPS +S+ + + DN+ K+ + + P NP L
Sbjct: 451 FLDEIR--KFPSL----LSYDDGSEHKLDYDNMKKVTQSIMGYFNLRDGYNPSDFKNPLL 504
Query: 453 ERFY-----HHLELKSEHQDAAPPPL--------DDSLKKI 480
++ Y + L++++ + P + DDSL+K+
Sbjct: 505 QKHYKVLHDYLLQIETTFDENETPNIKKDRMMREDDSLRKL 545
>gi|357614085|gb|EHJ68897.1| hypothetical protein KGM_11435 [Danaus plexippus]
Length = 594
Score = 42.4 bits (98), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 94/211 (44%), Gaps = 18/211 (8%)
Query: 207 VTIFRGDLELSEKMKIKVWVY---KKTGE--EKFPTLKKYSDKAPSTDKFATHEVKVDYE 261
+ I + + E+ + I V VY KK G+ +K L + S+ ++ K T +V D
Sbjct: 218 IAIAKINFEIGDTFNIGVSVYTLLKKAGQNNKKNINLDRESNAIVTSIK-NTLKVSNDVI 276
Query: 262 YKSVEDPSKVVPP---EQRIKGYRYGPQVVPISSAEWEAVK--FKPEKSVKLLGFTDASN 316
+ +D SK P + + +G + V + E + +K F P +KLLGF AS
Sbjct: 277 DEDSQDRSKRKVPLLKSELLHYQEFGGERVEFTDEEMKMIKNPFGP-PMMKLLGFKPASI 335
Query: 317 ILRHYYMKDVNLFIAEPGNS---RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGV 373
I + + + F+ P S +TVA AL A M VA+ R + V+V
Sbjct: 336 ICKEKWYFKIGQFLY-PNESIIEGSTVAFKALHEACTVMKMVALCILCTRVNSRPVIVA- 393
Query: 374 LTPNVSE-KINIPDSFYFNVLPFAEDVREFQ 403
L+P V +NI F +PF E VRE
Sbjct: 394 LSPCVKPLNLNIDIGFDIVNIPFVEHVRELN 424
>gi|337743283|gb|AEI73138.1| XRCC 6 [Kryptolebias marmoratus]
Length = 306
Score = 42.0 bits (97), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 86/202 (42%), Gaps = 17/202 (8%)
Query: 211 RGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHE-VKVDYEYKSVEDPS 269
R L L E + + V VY + + P AP T+E V+ + S
Sbjct: 87 RLSLCLGEGLNVAVGVYATAVQARKP--------APVRLYRETNEPVRSKTRTFHTQTGS 138
Query: 270 KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLF 329
++P E + K YG + + + E +A+K + + L+GF + H++++
Sbjct: 139 LLLPSEIK-KAQVYGKKQIVMERDEVDAIKKFDDPRLFLIGFKPMEKLKLHHHIRPSVFI 197
Query: 330 IAEPGNSRATVAV-SALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSE----KINI 384
E + + + + SAL + E N A+ RC+ R+ V L P + + K+ I
Sbjct: 198 YPEEEDVKGSACLFSALLKKCSERNIFALCRCISRRNYPPRFVA-LVPQLEDVDEGKVQI 256
Query: 385 -PDSFYFNVLPFAEDVREFQFP 405
P F LP+A+D+R P
Sbjct: 257 TPPGFNVIYLPYADDLRTLDPP 278
>gi|284043275|ref|YP_003393615.1| Ku protein [Conexibacter woesei DSM 14684]
gi|283947496|gb|ADB50240.1| Ku protein [Conexibacter woesei DSM 14684]
Length = 300
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 272 VPPEQRIKGYRYGP-QVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFI 330
VP EQ +KGY P + V ++ E +A+ + K++ + F D ++I YY D I
Sbjct: 56 VPFEQIVKGYEVAPDRYVIVTQDELDALDPRATKTIDIEEFVDLADIDPVYY--DSAYHI 113
Query: 331 AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQ 367
A P A A L AM+E KVAI R V R QQ
Sbjct: 114 A-PATGGAK-AYRLLLSAMEEAGKVAIGRFVLRTRQQ 148
>gi|349580576|dbj|GAA25736.1| K7_Yku70p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 602
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 99/221 (44%), Gaps = 25/221 (11%)
Query: 278 IKGYRYGPQVVPISSAEWEAV---KFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 334
+K Y YG + +S ++ + V + + +K++GF +S + ++ D + FI P
Sbjct: 332 VKVYPYGDLDINLSDSQDQIVMEAYTQKDAFLKIIGFRSSSKSIHYFNNIDKSSFIV-PD 390
Query: 335 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLP 394
++ ++ LA +K + K + +W + + S + T + S + + FY +P
Sbjct: 391 EAKYEGSIRTLASLLKILRKKDKIAILWGKLKSSSHPSLYTLSPSSVKDYNEGFYLYRVP 450
Query: 395 FAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD--LAPSGKGEILQPELTPNPAL 452
F +++R +FPS +S+ + + DN+ K+ + + P NP L
Sbjct: 451 FLDEIR--KFPSL----LSYDDGSEHKLDYDNMKKVTQSIMGYFNLRDGYNPSDFKNPLL 504
Query: 453 ERFY-----HHLELKSEHQDAAPPPL--------DDSLKKI 480
++ Y + L++++ + P DDSL+K+
Sbjct: 505 QKHYKVLHDYLLQIETTFDENETPNTKKDRMMREDDSLRKL 545
>gi|24584494|ref|NP_609767.2| Ku80 [Drosophila melanogaster]
gi|10728806|gb|AAG22435.1| Ku80 [Drosophila melanogaster]
Length = 699
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 84/408 (20%), Positives = 159/408 (38%), Gaps = 43/408 (10%)
Query: 269 SKVVP-PEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYM-KDV 326
+++ P PE I GY G VP A E + P + GF + + Y+ + +
Sbjct: 274 TEITPLPENLITGYMLGGTPVPYDEAVLEPKEPHP-PGLHFFGFIKRNAVPDEYFCGESL 332
Query: 327 NLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD 386
L + + N A V + AL RA+ ++ + ++ + VL P +++ + P
Sbjct: 333 YLLVHQKHNQSAAVKLDALVRALVSSDRAILCWKIYSTKFNRPQMVVLLPRLADDTH-PA 391
Query: 387 SFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLA----------PS 436
+ Y + + + FP+ + +E+Q A D L+ DL P
Sbjct: 392 TLYMLEVSYTSQHHFWDFPALRTTKT--ECSEEQLNAIDQLIDSTDLECTLRDTQQPRPW 449
Query: 437 GKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPL--DDSLKKITEPDPTLLAESQSA 494
+ ++L + P+ + LE K + + + D + + P L E
Sbjct: 450 AQNDLLPFDALPSIFEQNVMDILERKVIYDNDKEDKMLKDKNFADVFWRVPDPLEEKSKR 509
Query: 495 IDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNSMESKPVVTVDKI 554
A ++K+ L+ S R +EK ++ +V A E + + D +
Sbjct: 510 AAA-----IVKKLFPLRYS--RAWQEKLLAKEQAENGVAVKSEPA----EKEIPLPSDGV 558
Query: 555 GDLTPIQDFEAMM---------SRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVE 605
G + PI DF ++ + RD D + I LL+ + I + E
Sbjct: 559 GLIDPISDFRRVLASVHTISNATERDAR--FQALAADTRVVIITLLQRRKQNIG--QLGE 614
Query: 606 LLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFF-DFLMSKKLS 652
L+ R+ CI +++ E++ KI +N S F+ D ++ K+L
Sbjct: 615 LITLYRQSCIDFNTFLEYDKFAEELKKIALAKNRSEFWQDVMVDKQLG 662
>gi|281200480|gb|EFA74700.1| hypothetical protein PPL_11669 [Polysphondylium pallidum PN500]
Length = 132
Score = 42.0 bits (97), Expect = 1.1, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
Query: 330 IAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFY 389
++ PG+ A A+S+L M E + + R V R G S + +L P++ + Y
Sbjct: 2 VSPPGDKVARSALSSLIHGMAETKQALLSRYVKRNG-SSASIALLYPHIKANY---ECLY 57
Query: 390 FNVLPFAEDVREFQFPSFSKF-PVSWQPNEQQQEAAD 425
LPF +D++++QFP + P + +P E D
Sbjct: 58 VCQLPFLDDLKQYQFPPIAPTNPATRKPFIPTAEQVD 94
>gi|188584779|ref|YP_001916324.1| Ku protein [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179349466|gb|ACB83736.1| Ku protein [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 259
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 6/105 (5%)
Query: 261 EYKSV-EDPSKVVPPEQRIKGYRYGP-QVVPISSAEWEAVKFKPEKSVKLLGFTDASNIL 318
EYK V + K VP E+ +KGY Y P + V + ++EA+ + +S+ ++ F + S I
Sbjct: 43 EYKRVCSNCKKEVPYEEIVKGYEYEPGKFVVLEDEDFEALPQEEARSINIVEFVNLSEID 102
Query: 319 RHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWR 363
YY K L E G L + +KE KVA+ + V R
Sbjct: 103 PVYYDKTYYLTPQETGEK----PYQLLKQVLKEKGKVAVCKVVIR 143
>gi|195398021|ref|XP_002057623.1| GJ18003 [Drosophila virilis]
gi|194141277|gb|EDW57696.1| GJ18003 [Drosophila virilis]
Length = 701
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 82/414 (19%), Positives = 164/414 (39%), Gaps = 56/414 (13%)
Query: 269 SKVVP-PEQRIKGYRYGPQVVPISSAEWEAVKFKPEKS--VKLLGFTDASNILRHYYMKD 325
++V P PE I GY G VP V+ P S + +GF S+I Y+ +
Sbjct: 278 TEVTPLPEDLIDGYMLGGTPVPYDET---LVELPPAHSPGLHFVGFVKRSSIPDAYFSGN 334
Query: 326 -VNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINI 384
+ + + + GN + + AL RA+ + ++ + + VL P S ++
Sbjct: 335 SLYMLVHQKGNVVSAQKLDALVRALILQKCAVLCWKIFSVKFNTPRIVVLVPQES-TVDR 393
Query: 385 PDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKG----- 439
P + Y L + + + FP+ + N Q +A D L+ +DL + +
Sbjct: 394 PATLYMLELSYHAQHQFWDFPALRTAKT--ECNADQLQAVDTLIDSMDLECTLQDTQQPR 451
Query: 440 EILQPELTPNPALERFYHH-----LELKSEHQDAAPPP---------LDDSLKKITEPDP 485
+ Q +L P L + LE K + + P L D ++ EP
Sbjct: 452 QQRQNDLLPFDGLPSIFEQNVMDVLERKVINSAKSDPQFKAMLDDKNLVDFFWRVPEP-- 509
Query: 486 TLLAESQSAIDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNSMES 545
+ +S+ A A F ++ + +L++ + +E N +V + ++
Sbjct: 510 -IEQKSKQAAKALKKLFPLEH-------SHAWLQKLKAKEEEQNAPPTVKQERR----DT 557
Query: 546 KPVVTVDKIGDLTPIQDFEAMM---------SRRDCPDWVDKAIEDMKNKIFGLLENSNE 596
+ +++D +G +TP +D++ ++ ++RD M+ I LLE +
Sbjct: 558 QTSISIDSVGLMTPAEDYKQLLQKVRSEINTTQRDVQ--FQSLAAQMRVVIITLLERNKL 615
Query: 597 GINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKK 650
+N + E+L R C+ ++N + +RN F+ ++ +K
Sbjct: 616 DLN--QLNEVLTLYRDSCLEFNSFAEYNQFAALIKTKASERNLQEFWSSIVVEK 667
>gi|358339792|dbj|GAA29239.2| acylaminoacyl-peptidase [Clonorchis sinensis]
Length = 1249
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 97/235 (41%), Gaps = 27/235 (11%)
Query: 242 SDKAPSTDKFATHEV-KVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEA-VK 299
+D P T + ++V K + E+ ED ++ P I+G + G + + E ++
Sbjct: 914 ADNKPVTVRRHRYKVSKSNGEFDPTED---LLLPHDLIRGVKVGSRHLCFEQEEISGNIR 970
Query: 300 FKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRAT-VAVSALARAMKEMNKVAIV 358
+ LLGF + +++ + + R + V + L + +A+
Sbjct: 971 DLAPVGIHLLGFKPIHRLRPYHHTRAPQFIYPDESYIRGSRVWFTTLLQVCLNRRLLAMA 1030
Query: 359 RCVWRQGQQSVVVGVLTPNVSEKIN------IPDSFYFNVLPFAEDVREFQFPSFSKFPV 412
V R+ ++ L P EK++ P F+ LP+ +D R+ + P F
Sbjct: 1031 LYVQRKNIPPRLIA-LIPQ-EEKLDEDGVQVYPPGFHIIFLPYCDDFRDLELPEFE---- 1084
Query: 413 SWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQD 467
+E+Q EAA +VK L + P P NP L+R Y LE + H+D
Sbjct: 1085 --LASEEQVEAAKTMVKKL-MVP------YDPRQISNPILQRHYAVLEALALHRD 1130
>gi|190344290|gb|EDK35939.2| hypothetical protein PGUG_00037 [Meyerozyma guilliermondii ATCC
6260]
Length = 558
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 98/229 (42%), Gaps = 35/229 (15%)
Query: 278 IKGYRYGP-QVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNS 336
+ G++Y ++ + + K + + +LGF + Y+ + + ++A +
Sbjct: 231 VDGFKYSNFDLIAVDESLRGLATLKTDTGLDILGFIHREKVPMAYFTSE-SFYVAPTSEA 289
Query: 337 RAT-VAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTP-NVSEKINIPDSFYFNVLP 394
+ + V+A +A+ E++ AI R V ++ V + VL P + K +F LP
Sbjct: 290 QGNAIGVAAFCKALIELDSFAITRYV-QKANDEVQMCVLMPVKILHKDKHIYAFSMTRLP 348
Query: 395 FAEDVREFQFPSFSKFPVSW-----QPNEQQQEAADNL-VKMLD--LAPSGKGEI----- 441
F ED + +FP S F + +PN+ + + + K LD L SG I
Sbjct: 349 FKEDEKMGRFPKLSTFTTTSGKKIDEPNDLDMKMEEFIQSKDLDAVLGSSGPATISNRKV 408
Query: 442 -------------LQPELTP-NPALERFYHHLE---LKSEHQDAAPPPL 473
+QP L P +PA++++ +L+ KS D+ P L
Sbjct: 409 TMREPSSLPVELPVQPTLIPSSPAIQKYNQNLKRIIAKSLGHDSLPAYL 457
>gi|402079344|gb|EJT74609.1| hypothetical protein GGTG_08449 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 653
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 85/188 (45%), Gaps = 16/188 (8%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMK-DVNLFIAEPGNSR 337
K +++G + V + E +++K ++++GF S I +K +F AE
Sbjct: 341 KAHKFGGEYVHFTPEETKSLKDWGSHVLRIVGFKPRSAIPAWASIKKSTYIFPAEEDYVG 400
Query: 338 ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL---TPNVSEKIN--IPDSFYFNV 392
+ +AL + + +KVA+ V R ++V ++ +P+ E +P +
Sbjct: 401 SHRVFTALWKKLLRDDKVALAWLVARVNANPILVAIMPSRSPSDDESGTPFLPAGLWLYP 460
Query: 393 LPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPAL 452
LPFA+D+RE + ++ P + ++ +VK L L P G P PNPAL
Sbjct: 461 LPFADDLREPDKRATARAPKALISEMEK------VVKNLHL-PKG---TYNPAKFPNPAL 510
Query: 453 ERFYHHLE 460
+ Y L+
Sbjct: 511 QWHYRILQ 518
>gi|282891301|ref|ZP_06299803.1| hypothetical protein pah_c050o078 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|338175062|ref|YP_004651872.1| DNA repair protein [Parachlamydia acanthamoebae UV-7]
gi|281498798|gb|EFB41115.1| hypothetical protein pah_c050o078 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|336479420|emb|CCB86018.1| putative DNA repair protein Fjoh_3304 [Parachlamydia acanthamoebae
UV-7]
Length = 270
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 7/106 (6%)
Query: 270 KVVPPEQRIKGYRY--GPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN 327
K VP + +KGY Y G VV + ++E K K+++++ F D + + YY K
Sbjct: 53 KEVPWNEIVKGYEYEKGDYVV-LDDKDFEKANLKKTKTIEIVNFVDENEVDTIYYSKP-- 109
Query: 328 LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGV 373
+ EP + A A S L A+K+ KV + + + R + V+ V
Sbjct: 110 -YFLEP-DKNAFSAYSLLREALKKSKKVGLAKYILRNREHLAVIKV 153
>gi|38112385|gb|AAR11279.1| Ku autoantigen [Pan troglodytes]
Length = 138
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 58/104 (55%), Gaps = 4/104 (3%)
Query: 579 AIEDMKNKIFGLLE---NSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICR 635
+ E+ N++ +E ++NE + K+++ + A R+ I E ++FN+ L+ + +
Sbjct: 14 SFEEASNQLINHIEQFLDTNETPYFMKSIDCIRAFREEAIKFSEEQRFNNFLKALREKVE 73
Query: 636 KRNFSTFFDFLMSKKLSLISKSEAVDSDITDDEAGSFIV-KSQP 678
+ + F++ ++ ++LI+K EA S +T +EA F+ K +P
Sbjct: 74 IKQLNHFWEIVVQDGITLITKEEASGSSVTAEEAKKFLAPKDKP 117
>gi|241958364|ref|XP_002421901.1| high affinity DNA-binding factor subunit, putative; protein Ku DNA
binding protein subunit, putative [Candida dubliniensis
CD36]
gi|223645246|emb|CAX39888.1| high affinity DNA-binding factor subunit, putative [Candida
dubliniensis CD36]
Length = 610
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 60/140 (42%), Gaps = 2/140 (1%)
Query: 271 VVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEK-SVKLLGFTDASNILRHYYMKDVNLF 329
+VP + G++Y + + + E V P S+ +LGF +N Y+ +D
Sbjct: 290 IVPRAECTPGFKYSHRDILALTLELTEVATLPTYPSINVLGFMKTNNFCYAYFTQDAMYV 349
Query: 330 IAEPGNS-RATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSF 388
I +S R + +++ AM E+N +A+VR V + + V V+ I +
Sbjct: 350 IPHQKDSERNRLTFNSMVTAMIELNYIALVRFVQKPDGEVQVCAAFPKKVALGNQIGEVL 409
Query: 389 YFNVLPFAEDVREFQFPSFS 408
+ ED + +FP +
Sbjct: 410 LLVRIAMKEDEKIGRFPDLN 429
>gi|146421429|ref|XP_001486660.1| hypothetical protein PGUG_00037 [Meyerozyma guilliermondii ATCC
6260]
Length = 558
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 98/229 (42%), Gaps = 35/229 (15%)
Query: 278 IKGYRYGP-QVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNS 336
+ G++Y ++ + + K + + +LGF + Y+ + + ++A +
Sbjct: 231 VDGFKYSNFDLIAVDESLRGLATLKTDTGLDILGFIHREKVPMAYFTSE-SFYVAPTSEA 289
Query: 337 RAT-VAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTP-NVSEKINIPDSFYFNVLP 394
+ + V+A +A+ E++ AI R V ++ V + VL P + K +F LP
Sbjct: 290 QGNAIGVAAFCKALIELDSFAITRYV-QKANDEVQMCVLMPVKILHKDKHIYAFSMTRLP 348
Query: 395 FAEDVREFQFPSFSKFPVSW-----QPNEQQQEAADNL-VKMLD--LAPSGKGEI----- 441
F ED + +FP S F + +PN+ + + + K LD L SG I
Sbjct: 349 FKEDEKMGRFPKLSTFTTTSGKKIDEPNDLDMKMEEFIQSKDLDAVLGSSGPATISNRKV 408
Query: 442 -------------LQPELTP-NPALERFYHHLE---LKSEHQDAAPPPL 473
+QP L P +PA++++ +L+ KS D+ P L
Sbjct: 409 TMREPSSLPVELPVQPTLIPSSPAIQKYNQNLKRIIAKSLGHDSLPAYL 457
>gi|340960213|gb|EGS21394.1| hypothetical protein CTHT_0032510 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1710
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 98/211 (46%), Gaps = 23/211 (10%)
Query: 256 VKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDAS 315
V+VD E ++V D S++ +K +++G + + E A++ K ++L+GF S
Sbjct: 325 VRVDSEARTV-DKSEI------MKAWKFGGEFIRFKPEEAAALREFGSKVLRLIGFKPRS 377
Query: 316 NILRHYYM-KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL 374
+ + K V ++ +E +T SAL + + + +K+ I + R Q +V ++
Sbjct: 378 MLPSWASVKKSVFIYPSEELFVGSTRVFSALWQKLLKDDKIGIAWFIPRVNSQPQIVAII 437
Query: 375 -TPNVSEKIN----IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVK 429
+ N E+ +P + LPFA+DVR+ + P ++ E A + +
Sbjct: 438 PSENPDEEGAATPYLPAGLWLYPLPFADDVRKVDASA---------PPKKADELATKMRE 488
Query: 430 MLDLAPSGKGEILQPELTPNPALERFYHHLE 460
++ KG I P PNPAL+ Y L+
Sbjct: 489 IVGNLQLPKG-IYNPLKYPNPALQWHYRVLQ 518
>gi|160879871|ref|YP_001558839.1| Ku protein [Clostridium phytofermentans ISDg]
gi|269969713|sp|A9KS68.1|Y1728_CLOPH RecName: Full=Probable DNA repair protein Cphy_1728
gi|160428537|gb|ABX42100.1| Ku protein [Clostridium phytofermentans ISDg]
Length = 257
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 74/164 (45%), Gaps = 20/164 (12%)
Query: 270 KVVPPEQRIKGYRYGP-QVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNL 328
K V E +KGY Y + V I+ E E +K + EKS+++L F + I YY K
Sbjct: 52 KEVKTEDIVKGYEYDDDKYVVITDEEIEKIKTEKEKSIQILHFAQLNQISPVYYEKTYQA 111
Query: 329 FIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSF 388
+ E G + A L A+ K+AI + V G + ++ ++ P D
Sbjct: 112 -VPETGGEK---AFELLRSALMAEQKIAIGKTVM--GTKDTLMAII-PR-------EDGI 157
Query: 389 YFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD 432
+ + +A+D++ Q ++K V NEQ+ A L+ +D
Sbjct: 158 LISTMFYADDIKAIQ-KQYTKPEV----NEQEFNMAKLLINSMD 196
>gi|7546991|gb|AAF63744.1|AF237722_1 Ku80 [Drosophila melanogaster]
Length = 699
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 83/407 (20%), Positives = 159/407 (39%), Gaps = 43/407 (10%)
Query: 269 SKVVP-PEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYM-KDV 326
+++ P PE I GY G VP A E + P + GF + + Y+ + +
Sbjct: 274 TEITPLPENLITGYMLGGTPVPYDEAVLEPKEPHP-PGLHFFGFIKRNAVPDEYFCGESL 332
Query: 327 NLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD 386
L + + N A V + AL RA+ ++ + ++ + VL P +++ + P
Sbjct: 333 YLLVHQKHNQSAAVKLDALVRALVSSDRAILCWKIYSTKFNRPQMVVLLPRLTDDTH-PA 391
Query: 387 SFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLA----------PS 436
+ Y + + + FP+ + +E+Q A D L+ DL P
Sbjct: 392 TLYMLEVSYTSQHHFWDFPALRTTKT--ECSEEQLNAIDQLIDSTDLECTLRDTQQPRPW 449
Query: 437 GKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPL--DDSLKKITEPDPTLLAESQSA 494
+ ++L + P+ + LE K + + + D + + P L E
Sbjct: 450 AQNDLLPFDALPSIFEQNVMDILERKVIYDNDKEDKMLKDKNFADVFWRVPDPLEEKSKR 509
Query: 495 IDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNSMESKPVVTVDKI 554
A ++K+ L+ S R +EK ++ +V A E + + D +
Sbjct: 510 AAA-----IVKKLFPLRYS--RAWQEKLLAKEQAENGVAVKSEPA----EKEIPMPSDGV 558
Query: 555 GDLTPIQDFEAMM---------SRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVE 605
G + P+ DF ++ + RD D + I LL+ + I + E
Sbjct: 559 GLIDPVSDFRRVLASVHTISNATERDAR--FQTLAADTRVVIITLLQRRKQNIG--QLGE 614
Query: 606 LLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFF-DFLMSKKL 651
L+ R+ CI +++ E++ KI +N S F+ D ++ K+L
Sbjct: 615 LITLYRQSCIDFNTFLEYDKFAEELKKIALAKNRSEFWQDVMVDKQL 661
>gi|83590332|ref|YP_430341.1| DNA end-binding protein Ku [Moorella thermoacetica ATCC 39073]
gi|83573246|gb|ABC19798.1| DNA end-binding protein Ku [Moorella thermoacetica ATCC 39073]
Length = 277
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 50/107 (46%), Gaps = 7/107 (6%)
Query: 272 VPPEQRIKGYRY--GPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLF 329
VPPE+ +GY Y G V+ + + EA+ + +S+ ++ F D I Y+ + L
Sbjct: 55 VPPEEIARGYEYEKGKYVI-LREEDLEAIPAEKTRSINIMDFVDLEEIDPIYFSRSYYLA 113
Query: 330 IAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTP 376
A+ G + L +AM+E KVA+ R R + V V P
Sbjct: 114 PADMGQKPYLL----LKKAMEETGKVAVARVTIRSRESLATVRVYGP 156
>gi|21429758|gb|AAM50557.1| AT19081p [Drosophila melanogaster]
Length = 699
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 83/407 (20%), Positives = 159/407 (39%), Gaps = 43/407 (10%)
Query: 269 SKVVP-PEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYM-KDV 326
+++ P PE I GY G VP A E + P + GF + + Y+ + +
Sbjct: 274 TEITPLPENLITGYMLGGTPVPYDEAVLEPKEPHP-PGLHFFGFIKRNAVPDEYFCGESL 332
Query: 327 NLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPD 386
L + + N A V + AL RA+ ++ + ++ + VL P +++ + P
Sbjct: 333 YLLVHQKHNQSAAVKLDALVRALVSSDRAILCWKIYSTKFNRPQMVVLLPRLADDTH-PA 391
Query: 387 SFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLA----------PS 436
+ Y + + + FP+ + +E+Q A D L+ DL P
Sbjct: 392 TLYMLEVSYTSQHHFWDFPALRTTKT--ECSEEQLNAIDQLIDSTDLECTLRDTQQPRPW 449
Query: 437 GKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPL--DDSLKKITEPDPTLLAESQSA 494
+ ++L + P+ + LE K + + + D + + P L E
Sbjct: 450 AQNDLLPFDALPSIFEQNVMDILERKVIYDNDKEDKMLKDKNFADVFWRVPDPLEEKSKR 509
Query: 495 IDAFCGQFVIKENPKLKKSTRRFLREKPSGSDEPNGDGSVSDAQAVNSMESKPVVTVDKI 554
A ++K+ L+ S R +EK ++ +V A E + + D +
Sbjct: 510 AAA-----IVKKLFPLRYS--RAWQEKLLAKEQAENGVAVKSEPA----EKEIPMPSDGV 558
Query: 555 GDLTPIQDFEAMM---------SRRDCPDWVDKAIEDMKNKIFGLLENSNEGINYPKAVE 605
G + P+ DF ++ + RD D + I LL+ + I + E
Sbjct: 559 GLIDPVSDFRRVLASVHTISNATERDAR--FQTLAADTRVVIITLLQRRKQNIG--QLGE 614
Query: 606 LLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFF-DFLMSKKL 651
L+ R+ CI +++ E++ KI +N S F+ D ++ K+L
Sbjct: 615 LITLYRQSCIDFNTFLEYDKFAEELKKIALAKNRSEFWQDVMVDKQL 661
>gi|148228066|ref|NP_001082274.1| X-ray repair complementing defective repair in Chinese hamster
cells 6 [Xenopus laevis]
gi|50604152|gb|AAH77445.1| LOC398357 protein [Xenopus laevis]
Length = 611
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 105/497 (21%), Positives = 185/497 (37%), Gaps = 82/497 (16%)
Query: 5 REALLLLLDVSPSMHSVLP------DVEKLCSRLIQKKLIYGKNHEV-GVILFGTEETEN 57
R++L+ L+D S M + D+ C R + I +H++ V+ FGT E+ N
Sbjct: 34 RDSLIFLVDASKPMFESIDGELTPFDLTLQCIRSVYASKIISSDHDLLSVVFFGTRESTN 93
Query: 58 ELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGT----------CAGDYMLIKKYGET 107
++H+ VL D+ + L + C GD+ L GE
Sbjct: 94 -----CDPFKHLCVLHDLDTPGAKRILDLDKYKEEKGRALFCDTIGCGGDFSL----GEA 144
Query: 108 Y-------------KGKKHLCLITDALCP-LKDPDVGTKEDQVSTIARQMVAFGLRMKNI 153
K + L T+ P DP + + + M F L + ++
Sbjct: 145 LWLCSNLFSNVKVKMSHKRIMLFTNEDNPHANDPAKAKQARAKAEDLKDMGIF-LDLMHL 203
Query: 154 VVRASLSGEPHMRVII---ENDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIF 210
R I+ E+++L+ F K+S K + + A+K R +S
Sbjct: 204 EKPGGFDISLFYRDIVNTAEDEDLVVQF--KASEKLDDLLKKVRAKEAKK-RALS----- 255
Query: 211 RGDLELSEKMKIKVWVYKKTGEE-KFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPS 269
R +L+L + + V VY + K PT++ Y + + VK S
Sbjct: 256 RLNLKLGPDVGLTVGVYNLVQKAVKPPTVRLYRE--------SNEPVKTKTRIFHSNTGS 307
Query: 270 KVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLF 329
++P + + + YG + + + E E +K E + L+GF S + +H++ +
Sbjct: 308 LLLPSDTK-RSQTYGNRQIVLEKDETEQLKRFDEPGLVLIGFKPISCLKKHHFTRPAQFI 366
Query: 330 IAEPG-NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSE-----KIN 383
E + +T +AL +AI R R+ V L P E +
Sbjct: 367 YPEESIITGSTTLFNALLTRCLARQVMAICRYTPRRNTPPRFVA-LVPQDEELDDQNMQS 425
Query: 384 IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQ 443
P F LPFA+D+R+ P NE+Q + +V L +
Sbjct: 426 APSGFNLVCLPFADDIRKLDTPE------KITANEEQVDKMKEIVHKLRFN-------FR 472
Query: 444 PELTPNPALERFYHHLE 460
+ NP L++ + +LE
Sbjct: 473 SDSFENPVLQQHFRNLE 489
>gi|367474269|ref|ZP_09473786.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 285]
gi|365273415|emb|CCD86254.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 285]
Length = 309
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 25/164 (15%)
Query: 204 ISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYK 263
++P ++G L LS + V +Y T E + + + + K+ VKVD
Sbjct: 1 MAPRANWKGFLRLS-LVTCPVALYPATSESEKISFNQLNRTTGHRIKY----VKVD---- 51
Query: 264 SVEDPSKVVPPEQRIKGYRY-GPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI----- 317
D + VP E +KGY Q + +S E E + + +++++ F D ++I
Sbjct: 52 --ADTGEEVPSEDIVKGYELEKGQYIEVSKEELEEIALESTRTIEIDEFVDKTDIDPRYL 109
Query: 318 LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCV 361
+R YY++ P A + + ++EMNKVAI R V
Sbjct: 110 IRPYYLR--------PDGKVGHDAFAVIRETIREMNKVAIGRIV 145
>gi|37931498|gb|AAP13464.1| Ku80p [Kluyveromyces lactis]
Length = 521
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 52/130 (40%), Gaps = 3/130 (2%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRA 338
K YRYG V + E K + + + GF D + RHY + + + N
Sbjct: 311 KAYRYGADYVDLPMPLDEERKLSEKPGLDIRGFMDIDKLPRHYLCSESMYLVPDSKNGSK 370
Query: 339 T--VAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEK-INIPDSFYFNVLPF 395
+ L ++ +M ++ I R V + G + + + V +K N N LP
Sbjct: 371 GDFLGFVTLVDSLIKMKRLIIARFVPKFGNEVQMCSLFPVRVHDKDRNEVRLLVLNRLPM 430
Query: 396 AEDVREFQFP 405
+ED R FP
Sbjct: 431 SEDERNSAFP 440
>gi|112362615|emb|CAL36004.1| HDF1 protein [Saccharomyces paradoxus]
Length = 602
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 111/239 (46%), Gaps = 30/239 (12%)
Query: 278 IKGYRYGPQVVPISSAEWEAV---KFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 334
+K Y YG + +S + + V + + ++++GF ++ + ++ D + FI P
Sbjct: 332 VKVYPYGDLDINLSDNQDQIVMEAYTQKDAFLRIIGFRSSNKSIHYFNNIDKSSFIV-PD 390
Query: 335 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSV--VVGVLTPNVSEKINIPDSFYFNV 392
++ ++ LA +K + K + +W + + + + VL+P+ +++ N + FY
Sbjct: 391 EAKYEGSIRTLASLLKTLRKKDKIAMLWGKLKSNSHPSLFVLSPSSAKEYN--EGFYLYR 448
Query: 393 LPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD--LAPSGKGEILQPELTPNP 450
+PF +++R +FPS +S+ + + DN+ K+ + + P NP
Sbjct: 449 VPFLDEIR--KFPSL----LSYDDGSEHKLDYDNMKKITQSIMGHFNLRDGYNPSEFKNP 502
Query: 451 ALERFY-----HHLELKSEHQDAAPPPL--------DDSLKKITEPDPTLLAESQSAID 496
L++ Y + L++++ ++ P DDSL+K+ +L ES+ A D
Sbjct: 503 LLQKHYKVLHDYLLQIETTFEENEKPNAKKDRIMREDDSLRKLYYIRNKIL-ESERADD 560
>gi|112362613|emb|CAL36005.1| HDF1 protein [Saccharomyces paradoxus]
Length = 602
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 111/239 (46%), Gaps = 30/239 (12%)
Query: 278 IKGYRYGPQVVPISSAEWEAV---KFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 334
+K Y YG + +S + + V + + ++++GF ++ + ++ D + FI P
Sbjct: 332 VKVYPYGDLDINLSDNQDQIVMEAYTQKDAFLRIIGFRSSNKSIHYFNNIDKSSFIV-PD 390
Query: 335 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSV--VVGVLTPNVSEKINIPDSFYFNV 392
++ ++ LA +K + K + +W + + + + VL+P+ +++ N + FY
Sbjct: 391 EAKYEGSIRTLASLLKTLRKKDKIAMLWGKLKSNSHPSLFVLSPSSAKEYN--EGFYLYR 448
Query: 393 LPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD--LAPSGKGEILQPELTPNP 450
+PF +++R +FPS +S+ + + DN+ K+ + + P NP
Sbjct: 449 VPFLDEIR--KFPSL----LSYDDGSEHKLDYDNMKKITQSIMGHFNLRDGYNPSEFKNP 502
Query: 451 ALERFY-----HHLELKSEHQDAAPPPL--------DDSLKKITEPDPTLLAESQSAID 496
L++ Y + L++++ ++ P DDSL+K+ +L ES+ A D
Sbjct: 503 LLQKHYKVLHDYLLQIETTFEENEKPNAKKDRIMREDDSLRKLYYIRNKIL-ESERADD 560
>gi|167039605|ref|YP_001662590.1| Ku domain-containing protein [Thermoanaerobacter sp. X514]
gi|300915145|ref|ZP_07132460.1| Ku protein [Thermoanaerobacter sp. X561]
gi|307725069|ref|YP_003904820.1| Ku protein [Thermoanaerobacter sp. X513]
gi|166853845|gb|ABY92254.1| Ku domain protein [Thermoanaerobacter sp. X514]
gi|300888869|gb|EFK84016.1| Ku protein [Thermoanaerobacter sp. X561]
gi|307582130|gb|ADN55529.1| Ku protein [Thermoanaerobacter sp. X513]
Length = 270
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 63/152 (41%), Gaps = 14/152 (9%)
Query: 247 STDKFATHEVKVDYEYKSVEDPSKVVP-------PEQRIKGYRYGP-QVVPISSAEWEAV 298
+T+ A H ++ E KS K+ P E+ ++GY Y P + V I + E +
Sbjct: 23 ATEDHAIHFRQLHKECKSPIKYEKICPVCNRPVSDEEIVRGYEYEPGKFVIIDDEDLERI 82
Query: 299 KFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIV 358
K++ ++ FTD I YY D FI T L +MKE +VAI
Sbjct: 83 PMPTVKTIDIVDFTDIGQIDPIYY--DKTYFIV--PEDIGTKPYVLLRDSMKETKRVAIA 138
Query: 359 RCVWRQGQQSVVVGVLTPN--VSEKINIPDSF 388
+ V R Q + V V E ++ PD
Sbjct: 139 KVVIRSKQNLACIRVYEEKYLVMETMHFPDEI 170
>gi|167036900|ref|YP_001664478.1| Ku domain-containing protein [Thermoanaerobacter pseudethanolicus
ATCC 33223]
gi|320115319|ref|YP_004185478.1| Ku protein [Thermoanaerobacter brockii subsp. finnii Ako-1]
gi|166855734|gb|ABY94142.1| Ku domain protein [Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|319928410|gb|ADV79095.1| Ku protein [Thermoanaerobacter brockii subsp. finnii Ako-1]
Length = 270
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 63/152 (41%), Gaps = 14/152 (9%)
Query: 247 STDKFATHEVKVDYEYKSVEDPSKVVP-------PEQRIKGYRYGP-QVVPISSAEWEAV 298
+T+ A H ++ E KS K+ P E+ ++GY Y P + V I + E +
Sbjct: 23 ATEDHAIHFRQLHKECKSPIKYEKICPVCNRPVSDEEIVRGYEYEPGKFVIIDDEDLERI 82
Query: 299 KFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIV 358
K++ ++ FTD I YY D FI T L +MKE +VAI
Sbjct: 83 PMPTVKTIDIVDFTDIGQIDPIYY--DKTYFIV--PEDIGTKPYVLLRDSMKETKRVAIA 138
Query: 359 RCVWRQGQQSVVVGVLTPN--VSEKINIPDSF 388
+ V R Q + V V E ++ PD
Sbjct: 139 KVVIRSKQNLACIRVYEEKYMVMETMHFPDEI 170
>gi|112362625|emb|CAL35999.1| HDF1 protein [Saccharomyces paradoxus]
Length = 602
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 111/239 (46%), Gaps = 30/239 (12%)
Query: 278 IKGYRYGPQVVPISSAEWEAV---KFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 334
+K Y YG + +S + + V + + ++++GF ++ + ++ D + FI P
Sbjct: 332 VKVYPYGDLDINLSDNQDQIVMEAYTQKDAFLRIIGFRSSNKSIHYFNNIDKSSFIV-PD 390
Query: 335 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSV--VVGVLTPNVSEKINIPDSFYFNV 392
++ ++ LA +K + K + +W + + + + VL+P+ +++ N + FY
Sbjct: 391 EAKYEGSIRTLASLLKTLRKKDKIAMLWGKLKSNSHPSLFVLSPSSAKEYN--EGFYLYR 448
Query: 393 LPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD--LAPSGKGEILQPELTPNP 450
+PF +++R +FPS +S+ + + DN+ K+ + + P NP
Sbjct: 449 VPFLDEIR--KFPSL----LSYDDGSEHKLDYDNMKKITQSIMGYFNLRDGYNPSEFKNP 502
Query: 451 ALERFY-----HHLELKSEHQDAAPPPL--------DDSLKKITEPDPTLLAESQSAID 496
L++ Y + L++++ ++ P DDSL+K+ +L ES+ A D
Sbjct: 503 LLQKHYKVLHDYLLQIETTFEENEKPSAKKDRIMREDDSLRKLYYMRNKIL-ESEKADD 560
>gi|112362627|emb|CAL35998.1| HDF1 protein [Saccharomyces paradoxus]
gi|112362629|emb|CAL35997.1| HDF1 protein [Saccharomyces paradoxus]
gi|112362631|emb|CAL35996.1| HDF1 protein [Saccharomyces paradoxus]
gi|112362633|emb|CAL35995.1| HDF1 protein [Saccharomyces paradoxus]
gi|112362641|emb|CAL35991.1| HDF1 protein [Saccharomyces paradoxus]
Length = 602
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 111/239 (46%), Gaps = 30/239 (12%)
Query: 278 IKGYRYGPQVVPISSAEWEAV---KFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 334
+K Y YG + +S + + V + + ++++GF ++ + ++ D + FI P
Sbjct: 332 VKVYPYGDLDINLSDNQDQIVMEAYTQKDAFLRIIGFRSSNKSIHYFNNIDKSSFIV-PD 390
Query: 335 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSV--VVGVLTPNVSEKINIPDSFYFNV 392
++ ++ LA +K + K + +W + + + + VL+P+ +++ N + FY
Sbjct: 391 EAKYEGSIRTLASLLKTLRKKDKIAMLWGKLKSNSHPSLFVLSPSSAKEYN--EGFYLYR 448
Query: 393 LPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD--LAPSGKGEILQPELTPNP 450
+PF +++R +FPS +S+ + + DN+ K+ + + P NP
Sbjct: 449 VPFLDEIR--KFPSL----LSYDDGSEHKLDYDNMKKITQSIMGYFNLRDGYNPSEFKNP 502
Query: 451 ALERFY-----HHLELKSEHQDAAPPPL--------DDSLKKITEPDPTLLAESQSAID 496
L++ Y + L++++ ++ P DDSL+K+ +L ES+ A D
Sbjct: 503 LLQKHYKVLHDYLLQIETTFEENEKPSAKKDRIMREDDSLRKLYYMRNKIL-ESEKADD 560
>gi|50304291|ref|XP_452095.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641227|emb|CAH02488.1| KLLA0B12672p [Kluyveromyces lactis]
Length = 609
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 52/130 (40%), Gaps = 3/130 (2%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRA 338
K YRYG V + E K + + + GF D + RHY + + + N
Sbjct: 311 KAYRYGADYVDLPMPLDEERKLSEKPGLDIRGFMDIDKLPRHYLCSESMYLVPDSKNGSK 370
Query: 339 T--VAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEK-INIPDSFYFNVLPF 395
+ L ++ +M ++ I R V + G + + + V +K N N LP
Sbjct: 371 GDFLGFVTLVDSLIKMKRLIIARFVPKFGNEVQMCSLFPVRVHDKDRNEVRLLVLNRLPM 430
Query: 396 AEDVREFQFP 405
+ED R FP
Sbjct: 431 SEDERNSAFP 440
>gi|112362595|emb|CAL36014.1| HDF1 protein [Saccharomyces cerevisiae]
Length = 602
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 99/221 (44%), Gaps = 25/221 (11%)
Query: 278 IKGYRYGPQVVPISSAEWEAV---KFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 334
+K Y YG + +S ++ + V + + +K++GF +S + ++ D + FI P
Sbjct: 332 VKVYPYGDLDINLSDSQDQIVMEAYTQKDAFLKIIGFRSSSKSIHYFNNIDKSSFIV-PD 390
Query: 335 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLP 394
++ ++ LA +K + K + +W + + + + T + S + + FY +P
Sbjct: 391 EAKYEGSIRTLASLLKILRKKDKIAILWGKLKSNSHPSLYTLSPSSVKDYNEGFYLYRVP 450
Query: 395 FAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD--LAPSGKGEILQPELTPNPAL 452
F +++R +FPS +S+ + + DN+ K+ + + P NP L
Sbjct: 451 FLDEIR--KFPSL----LSYDDGSEHKLDYDNMKKVTQSIMGYFNLRDGYNPSDFKNPLL 504
Query: 453 ERFY-----HHLELKSEHQDAAPPPL--------DDSLKKI 480
++ Y + L++++ + P DDSL+K+
Sbjct: 505 QKHYKVLHDYLLQIETTFDENETPNTKKDRMMREDDSLRKL 545
>gi|326390406|ref|ZP_08211964.1| Ku protein [Thermoanaerobacter ethanolicus JW 200]
gi|345018424|ref|YP_004820777.1| DNA repair protein [Thermoanaerobacter wiegelii Rt8.B1]
gi|325993524|gb|EGD51958.1| Ku protein [Thermoanaerobacter ethanolicus JW 200]
gi|344033767|gb|AEM79493.1| DNA repair protein [Thermoanaerobacter wiegelii Rt8.B1]
Length = 270
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 63/152 (41%), Gaps = 14/152 (9%)
Query: 247 STDKFATHEVKVDYEYKSVEDPSKVVP-------PEQRIKGYRYGP-QVVPISSAEWEAV 298
+T+ A H ++ E KS K+ P E+ ++GY Y P + V I + E +
Sbjct: 23 ATEDHAIHFRQLHKECKSPIKYEKICPVCNRPVSDEEIVRGYEYEPGKFVIIDDEDLERI 82
Query: 299 KFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIV 358
K++ ++ FTD I YY D FI T L +MKE +VAI
Sbjct: 83 PMPTVKTIDIVDFTDIGQIDPIYY--DKTYFIV--PEDIGTKPYVLLRDSMKETKRVAIA 138
Query: 359 RCVWRQGQQSVVVGVLTPN--VSEKINIPDSF 388
+ V R Q + V V E ++ PD
Sbjct: 139 KVVIRSKQNLACIRVYDEKYMVMETMHFPDEI 170
>gi|392578958|gb|EIW72085.1| hypothetical protein TREMEDRAFT_26590 [Tremella mesenterica DSM
1558]
Length = 735
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 77/181 (42%), Gaps = 23/181 (12%)
Query: 305 SVKLLGFTDASNI-----LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVR 359
+K+LGF N+ +RH + L+ E S +T +AL ++ + N+ A+
Sbjct: 460 GIKILGFQSPQNLKFDENIRHSFF----LYPDESTYSGSTRTFAALLKSCLKYNRHALAL 515
Query: 360 CVWRQGQQSVVVGVLTPNVSEKI-----NIPDSFYFNVLPFAEDVREFQFPSFSKFPVSW 414
C +++ + VL P + P F+ +LP+ +D+R + +
Sbjct: 516 CRFKRNS-TPEFAVLIPQEETFTKEGGQDQPPGFHVIILPYRDDIR----GAPKNMTDNL 570
Query: 415 QPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLD 474
E+Q + N+VK L + K + E+ PNP+L Y ++ + +D P
Sbjct: 571 SATERQAQLMSNIVKRLRI----KAGHYRSEVYPNPSLAYHYAQIQALAFEEDFDPSTAT 626
Query: 475 D 475
D
Sbjct: 627 D 627
>gi|112362635|emb|CAL35994.1| HDF1 protein [Saccharomyces paradoxus]
gi|112362637|emb|CAL35993.1| HDF1 protein [Saccharomyces paradoxus]
gi|112362639|emb|CAL35992.1| HDF1 protein [Saccharomyces paradoxus]
Length = 602
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 111/239 (46%), Gaps = 30/239 (12%)
Query: 278 IKGYRYGPQVVPISSAEWEAV---KFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 334
+K Y YG + +S + + V + + ++++GF ++ + ++ D + FI P
Sbjct: 332 VKVYPYGDLDINLSDNQDQIVMEAYTQKDAFLRIIGFRSSNKSIHYFNNIDKSSFIV-PD 390
Query: 335 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSV--VVGVLTPNVSEKINIPDSFYFNV 392
++ ++ LA +K + K + +W + + + + VL+P+ +++ N + FY
Sbjct: 391 EAKYEGSIRTLASLLKTLRKKDKIAMLWGKLKSNSHPSLFVLSPSSAKEYN--EGFYLYR 448
Query: 393 LPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD--LAPSGKGEILQPELTPNP 450
+PF +++R +FPS +S+ + + DN+ K+ + + P NP
Sbjct: 449 VPFLDEIR--KFPSL----LSYDDGSEHKLDYDNMKKITQSIMGHFNLRDGYNPSEFKNP 502
Query: 451 ALERFY-----HHLELKSEHQDAAPPPL--------DDSLKKITEPDPTLLAESQSAID 496
L++ Y + L++++ ++ P DDSL+K+ +L ES+ A D
Sbjct: 503 LLQKHYKVLHDYLLQIETTFEENEKPNAKKDRIMREDDSLRKLYYIRNKIL-ESERADD 560
>gi|112362623|emb|CAL36000.1| HDF1 protein [Saccharomyces paradoxus]
Length = 602
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 111/239 (46%), Gaps = 30/239 (12%)
Query: 278 IKGYRYGPQVVPISSAEWEAV---KFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 334
+K Y YG + +S + + V + + ++++GF ++ + ++ D + FI P
Sbjct: 332 VKVYPYGDLDINLSDNQDQIVMEAYTQKDAFLRIIGFRSSNKSIHYFNNIDKSSFIV-PD 390
Query: 335 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSV--VVGVLTPNVSEKINIPDSFYFNV 392
++ ++ LA +K + K + +W + + + + VL+P+ +++ N + FY
Sbjct: 391 EAKYEGSIRTLASLLKTLRKKDKIAMLWGKLKSNSHPSLFVLSPSSAKEYN--EGFYLYR 448
Query: 393 LPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD--LAPSGKGEILQPELTPNP 450
+PF +++R +FPS +S+ + + DN+ K+ + + P NP
Sbjct: 449 VPFLDEIR--KFPSL----LSYDDGSEHKLDYDNMKKITQSIMGYFNLRDGYNPSEFKNP 502
Query: 451 ALERFY-----HHLELKSEHQDAAPPPL--------DDSLKKITEPDPTLLAESQSAID 496
L++ Y + L++++ ++ P DDSL+K+ +L ES+ A D
Sbjct: 503 LLQKHYKVLHDYLLQIETTFEENEKPSAKKDRIMREDDSLRKLYYMRNKIL-ESEKADD 560
>gi|112362643|emb|CAL35990.1| HDF1 protein [Saccharomyces paradoxus]
gi|112362645|emb|CAL35989.1| HDF1 protein [Saccharomyces paradoxus]
Length = 602
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 111/239 (46%), Gaps = 30/239 (12%)
Query: 278 IKGYRYGPQVVPISSAEWEAV---KFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 334
+K Y YG + +S + + V + + ++++GF ++ + ++ D + FI P
Sbjct: 332 VKVYPYGDLDINLSDNQDQIVMEAYTQKDAFLRIIGFRSSNKSIHYFNNIDKSSFIV-PD 390
Query: 335 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSV--VVGVLTPNVSEKINIPDSFYFNV 392
++ ++ LA +K + K + +W + + + + VL+P+ +++ N + FY
Sbjct: 391 EAKYEGSIRTLASLLKTLRKKDKIAMLWGKLKSNSHPSLFVLSPSSAKEYN--EGFYLYR 448
Query: 393 LPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD--LAPSGKGEILQPELTPNP 450
+PF +++R +FPS +S+ + + DN+ K+ + + P NP
Sbjct: 449 VPFLDEIR--KFPSL----LSYDDGSEHKLDYDNMKKITQSIMGYFNLRDGYNPSEFKNP 502
Query: 451 ALERFY-----HHLELKSEHQDAAPPPL--------DDSLKKITEPDPTLLAESQSAID 496
L++ Y + L++++ ++ P DDSL+K+ +L ES+ A D
Sbjct: 503 LLQKHYKVLHDYLLQIETTFEENEKPSAKKDRIMREDDSLRKLYYMRNKIL-ESEKADD 560
>gi|113913535|gb|ABI48911.1| YKU70 [Saccharomyces pastorianus]
Length = 601
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 45/236 (19%), Positives = 104/236 (44%), Gaps = 29/236 (12%)
Query: 278 IKGYRYGPQVVPISSAEWEAV---KFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 334
+K Y YG + +S + + + + + ++++GF + ++ + + FI P
Sbjct: 331 VKVYPYGDLDIKLSEKQNQVIMEAYTQKDAFLRIIGFRSPDRSIHYFNNIEKSTFIV-PD 389
Query: 335 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSV--VVGVLTPNVSEKINIPDSFYFNV 392
++ ++ L K + K + +W + + + + VL+P+ E+ N + FY
Sbjct: 390 EAKYEGSIRTLTSLFKTLRKKDKIALLWGKLKSNSHPSLFVLSPSSVEEYN--EGFYLYR 447
Query: 393 LPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD--LAPSGKGEILQPELTPNP 450
+PF +++R +FPS +S+ E+ + DN+ ++ + + P NP
Sbjct: 448 IPFLDEIR--KFPSL----LSYDSGEKHKLDYDNMKRITQSIMGYFNLRDGYNPSDFKNP 501
Query: 451 ALERFYH-------HLELKSEHQDAAPPPL------DDSLKKITEPDPTLLAESQS 493
+L+R + +E+ +E + + + DDSL+K+ +L +S
Sbjct: 502 SLQRHFKVLHDYLLQIEINTEENETSEAKINRVIHEDDSLRKLYHIRNKILESEKS 557
>gi|289579044|ref|YP_003477671.1| Ku protein [Thermoanaerobacter italicus Ab9]
gi|289528757|gb|ADD03109.1| Ku protein [Thermoanaerobacter italicus Ab9]
Length = 270
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 51/120 (42%), Gaps = 7/120 (5%)
Query: 272 VPPEQRIKGYRYGP-QVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFI 330
V E+ ++GY Y P + V I + E + K++ ++ FTD I YY D FI
Sbjct: 55 VSDEEIVRGYEYEPGKFVIIDEEDLERIPMPTVKTIDIVDFTDIGQIDPIYY--DKTYFI 112
Query: 331 AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPN--VSEKINIPDSF 388
T L +MKE +VAI + V R Q + V V E ++ PD
Sbjct: 113 V--PEDIGTKPYVLLRDSMKETKRVAIAKVVIRSKQSLACIRVYDEKYMVMETMHFPDEI 170
>gi|3765|emb|CAA49840.1| high affinity DNA binding protein [Saccharomyces cerevisiae]
Length = 602
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 99/221 (44%), Gaps = 25/221 (11%)
Query: 278 IKGYRYGPQVVPISSAEWEAV---KFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 334
+K Y YG + +S ++ + V + + +K++GF +S + ++ D + FI P
Sbjct: 332 VKVYPYGDLDINLSDSQDQIVMEAYTQKDAFLKIIGFRSSSKSIHYFNNIDKSSFIV-PD 390
Query: 335 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLP 394
++ ++ LA +K + K + +W + + + + T + S + + FY +P
Sbjct: 391 EAKYEGSIRTLASLLKILRKKDKIAILWGKLKSNSHPSLYTLSPSSVKDYNEGFYLYRVP 450
Query: 395 FAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD--LAPSGKGEILQPELTPNPAL 452
F +++R +FPS +S+ + + DN+ K+ + + P NP L
Sbjct: 451 FLDEIR--KFPSL----LSYDDGSEHKLDYDNMKKVTQSIMGYFNLRDGYNPSDFKNPLL 504
Query: 453 ERFY-----HHLELKSEHQDAAPPPL--------DDSLKKI 480
++ Y + L++++ + P DDSL+K+
Sbjct: 505 QKHYKVLHDYLLQIETTFDENETPNTKKDRMMREDDSLRKL 545
>gi|392939504|ref|ZP_10305148.1| Ku protein [Thermoanaerobacter siderophilus SR4]
gi|392291254|gb|EIV99697.1| Ku protein [Thermoanaerobacter siderophilus SR4]
Length = 270
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 63/152 (41%), Gaps = 14/152 (9%)
Query: 247 STDKFATHEVKVDYEYKSVEDPSKVVP-------PEQRIKGYRYGP-QVVPISSAEWEAV 298
+T+ A H ++ E KS K+ P E+ ++GY Y P + V I + E +
Sbjct: 23 ATEDHAIHFRQLHKECKSPIKYEKICPVCNRPVSDEEIVRGYEYEPGKFVIIDDEDLERI 82
Query: 299 KFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIV 358
K++ ++ FTD I YY D FI T L +MKE +VAI
Sbjct: 83 PMPTVKTIDIVDFTDIGQIDPIYY--DKTYFIV--PEDIGTKPYVLLRDSMKETKRVAIA 138
Query: 359 RCVWRQGQQSVVVGVLTPN--VSEKINIPDSF 388
+ V R Q + V V E ++ PD
Sbjct: 139 KVVIRSKQNLACIRVYDEKYMVMETMHFPDEI 170
>gi|344296330|ref|XP_003419862.1| PREDICTED: X-ray repair cross-complementing protein 6 [Loxodonta
africana]
Length = 612
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 10/148 (6%)
Query: 264 SVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYM 323
+V + S ++P + + + YG + + + E E +K E + L+GF + +H+Y+
Sbjct: 306 NVNNGSLLLPSDTK-RSQSYGSRQIVLEKEETEQLKRFDEPGLTLIGFKPLIMLKKHHYL 364
Query: 324 KDVNLFI--AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSE- 380
K +LF+ E + +T SAL E +A+ R + R V +L P E
Sbjct: 365 KP-SLFVYPEESLVNGSTALFSALLTKCLEKEVMAVCRYIPRHNSPPYFV-MLVPQDEEL 422
Query: 381 ---KINI-PDSFYFNVLPFAEDVREFQF 404
KI + P F LP+A+D R+ F
Sbjct: 423 DDQKIQVTPPGFQLMFLPYADDKRKVPF 450
>gi|51013177|gb|AAT92882.1| YMR284W [Saccharomyces cerevisiae]
Length = 602
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 99/221 (44%), Gaps = 25/221 (11%)
Query: 278 IKGYRYGPQVVPISSAEWEAV---KFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 334
+K Y YG + +S ++ + V + + +K++GF +S + ++ D + FI P
Sbjct: 332 VKVYPYGDLDINLSDSQDQIVMEAYTQKDAFLKIIGFRSSSKSIHYFNNIDKSSFIV-PD 390
Query: 335 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLP 394
++ ++ LA +K + K + +W + + + + T + S + + FY +P
Sbjct: 391 EAKYEGSIRTLASLLKILRKKDKIAILWGKLKSNSHPSLYTLSPSSVKDYNEGFYLYRVP 450
Query: 395 FAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD--LAPSGKGEILQPELTPNPAL 452
F +++R +FPS +S+ + + DN+ K+ + + P NP L
Sbjct: 451 FLDEIR--KFPSL----LSYDDGSEHKLDYDNMKKVTQSIMGYFNLRDGYNPSDFKNPLL 504
Query: 453 ERFY-----HHLELKSEHQDAAPPPL--------DDSLKKI 480
++ Y + L++++ + P DDSL+K+
Sbjct: 505 QKHYKVLHDYLLQIETTFDENETPNTKKDRMMREDDSLRKL 545
>gi|297545249|ref|YP_003677551.1| Ku protein [Thermoanaerobacter mathranii subsp. mathranii str. A3]
gi|296843024|gb|ADH61540.1| Ku protein [Thermoanaerobacter mathranii subsp. mathranii str. A3]
Length = 270
Score = 40.8 bits (94), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 50/117 (42%), Gaps = 7/117 (5%)
Query: 275 EQRIKGYRYGP-QVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP 333
E+ ++GY Y P + V I + E + K++ ++ FTD I YY D FI
Sbjct: 58 EEIVRGYEYEPGKFVIIDEEDLERIPMPTVKTIDIVDFTDIGQIDPIYY--DKTYFIV-- 113
Query: 334 GNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPN--VSEKINIPDSF 388
T L +MKE +VAI + V R Q + V V E ++ PD
Sbjct: 114 PEDIGTKPYVLLRDSMKETKRVAIAKVVIRSKQSLACIRVYDEKYMVMETMHFPDEI 170
>gi|448509059|ref|XP_003866049.1| Yku80 Yku70p-Yku80p Ku complex subunit [Candida orthopsilosis Co
90-125]
gi|380350387|emb|CCG20609.1| Yku80 Yku70p-Yku80p Ku complex subunit [Candida orthopsilosis Co
90-125]
Length = 609
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 91/222 (40%), Gaps = 32/222 (14%)
Query: 266 EDPSKVVPPEQRIKGYRYGPQ-VVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMK 324
E+ + V + G++Y + VV + EA + + ++GF D S + Y
Sbjct: 285 ENDKEYVKDSEYTYGFKYSQRNVVALLPELEEAATLETSPGINIMGFIDRSKLPVAYLTD 344
Query: 325 DVNLFIAEPGNSRAT---VAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL--TPNVS 379
+ + I PG T VA ++L +A+ E+N AIVR + ++ + + L + NV
Sbjct: 345 EPSYVI--PGAKSETENKVAFNSLVQALIELNCAAIVRYIQKEAHEVQICCALPQSINVG 402
Query: 380 EKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNL------------ 427
EK + L ED + +FP F K + + + N+
Sbjct: 403 EKWG--HGLVLHRLAMKEDEKIGKFPEF-KLSGQEKLDSTMEAFVKNMKLRNDTTEPDVL 459
Query: 428 ----VKMLDLAPSGKGEILQPE-----LTPNPALERFYHHLE 460
V +L+ P E QP L+ PA +RF +++E
Sbjct: 460 KNSKVGLLESKPFTSQEDAQPSLENMLLSSCPATKRFNYYVE 501
>gi|112362589|emb|CAL36017.1| HDF1 protein [Saccharomyces cerevisiae]
Length = 602
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 99/221 (44%), Gaps = 25/221 (11%)
Query: 278 IKGYRYGPQVVPISSAEWEAV---KFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 334
+K Y YG + +S ++ + V + + +K++GF +S + ++ D + FI P
Sbjct: 332 VKVYPYGDLDINLSDSQDQIVMEAYTQKDAFLKIIGFRSSSKSIHYFNNIDKSSFIV-PD 390
Query: 335 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLP 394
++ ++ LA +K + K + +W + + + + T + S + + FY +P
Sbjct: 391 EAKYEGSIRTLASLLKILRKKDKIAILWGKLKSNSHPSLYTLSPSSVKDYNEGFYLYRVP 450
Query: 395 FAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD--LAPSGKGEILQPELTPNPAL 452
F +++R +FPS +S+ + + DN+ K+ + + P NP L
Sbjct: 451 FLDEIR--KFPSL----LSYDDGSEHKLDYDNMKKVTQSIMGYFNLRDGYNPSDFKNPLL 504
Query: 453 ERFY-----HHLELKSEHQDAAPPPL--------DDSLKKI 480
++ Y + L++++ + P DDSL+K+
Sbjct: 505 QKHYKVLHDYLLQIETTFDENETPNTKKDRMMREDDSLRKL 545
>gi|365763979|gb|EHN05505.1| Yku70p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 602
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 99/221 (44%), Gaps = 25/221 (11%)
Query: 278 IKGYRYGPQVVPISSAEWEAV---KFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 334
+K Y YG + +S ++ + V + + +K++GF +S + ++ D + FI P
Sbjct: 332 VKVYPYGDLDINLSDSQDQIVMEAYTQKDAFLKIIGFRSSSKSIHYFNNIDKSSFIV-PD 390
Query: 335 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLP 394
++ ++ LA +K + K + +W + + + + T + S + + FY +P
Sbjct: 391 EAKYEGSIRTLASLLKILRKKDKIAILWGKLKSNSHPSLYTLSPSSVKDYNEGFYLYRVP 450
Query: 395 FAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD--LAPSGKGEILQPELTPNPAL 452
F +++R +FPS +S+ + + DN+ K+ + + P NP L
Sbjct: 451 FLDEIR--KFPSL----LSYDDGSEHKLDYDNMKKVTQSIMGYFNLRDGYNPSDFKNPLL 504
Query: 453 ERFY-----HHLELKSEHQDAAPPPL--------DDSLKKI 480
++ Y + L++++ + P DDSL+K+
Sbjct: 505 QKHYKVLHDYLLQIETTFDENETPNTKKDRMMREDDSLRKL 545
>gi|115433678|ref|XP_001216976.1| hypothetical protein ATEG_08355 [Aspergillus terreus NIH2624]
gi|114189828|gb|EAU31528.1| hypothetical protein ATEG_08355 [Aspergillus terreus NIH2624]
Length = 674
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 101/226 (44%), Gaps = 27/226 (11%)
Query: 265 VEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI-----LR 319
+D ++ + + K Y++G V S E + ++ + ++++GF S + ++
Sbjct: 328 ADDTARTIEKWEVKKAYKFGGDQVSFSPEELKELRNFGDPVIRIIGFKPLSALPFWANVK 387
Query: 320 HYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVS 379
H + ++ +E +T SAL + + K+A+V + R+ V+ ++
Sbjct: 388 HPFF----IYPSEEDFIGSTRVFSALHQTLLRDKKLALVWFIPRKNGAPVLGAMIAGQ-- 441
Query: 380 EKIN------IPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDL 433
EK++ P + LPFA+DVR+ S S P +P Q +++ L L
Sbjct: 442 EKLDENGVQKFPPGMWIIPLPFADDVRQNPETSLSVAP---EPLIDQMRF---IIQQLQL 495
Query: 434 APSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLDDSLKK 479
P G + +P PNP+L+ Y L+ + +D P D ++ K
Sbjct: 496 -PKG---VYEPSKYPNPSLQWHYRILQALALDEDLPEQPEDKTVPK 537
>gi|421074888|ref|ZP_15535907.1| DNA repair protein [Pelosinus fermentans JBW45]
gi|392526948|gb|EIW50055.1| DNA repair protein [Pelosinus fermentans JBW45]
Length = 272
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 96/228 (42%), Gaps = 27/228 (11%)
Query: 272 VPPEQRIKGYRYGP-QVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFI 330
VP E+ +KG+ P Q V IS E E V K + +++ F D I Y+ L
Sbjct: 56 VPKEEIVKGFEVSPEQYVIISPEEIENVYPKSSRRIEIADFVDLEQIDPIYFEHSYYL-T 114
Query: 331 AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYF 390
E G + A S L AMK+ K AI V R Q + + P + I + F+
Sbjct: 115 PEKGMEK---AYSLLLIAMKKSQKTAIASFVLRNKQ---YIAAIRPT-NNVITLSTMFFS 167
Query: 391 NVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNP 450
+ + E++ + P+ QPNE++ A L++ L + PE N
Sbjct: 168 DEIISQENLED--LPT-----EEHQPNERELSIALQLIESLSSS-------FTPEKYHNE 213
Query: 451 ALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAF 498
E+ +E K+E Q P+ + K+ + L+A ++++ A
Sbjct: 214 YREKLLSMIESKAEGQVITQQPIIEQGGKVVD----LMAALEASLSAL 257
>gi|323303481|gb|EGA57275.1| Yku70p [Saccharomyces cerevisiae FostersB]
Length = 602
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 99/221 (44%), Gaps = 25/221 (11%)
Query: 278 IKGYRYGPQVVPISSAEWEAV---KFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 334
+K Y YG + +S ++ + V + + +K++GF +S + ++ D + FI P
Sbjct: 332 VKVYPYGDLDINLSDSQDQIVMEAYTQKDAFLKIIGFRSSSKSIHYFNNIDKSSFIV-PD 390
Query: 335 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLP 394
++ ++ LA +K + K + +W + + + + T + S + + FY +P
Sbjct: 391 EAKYEGSIRTLASLLKILRKKDKIAILWGKLKSNSHPSLYTLSPSSVKDYNEGFYLYRVP 450
Query: 395 FAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD--LAPSGKGEILQPELTPNPAL 452
F +++R +FPS +S+ + + DN+ K+ + + P NP L
Sbjct: 451 FLDEIR--KFPSL----LSYDDGSEHKLDYDNMKKVTQSIMGYFNLRDGYNPSDFKNPLL 504
Query: 453 ERFY-----HHLELKSEHQDAAPPPL--------DDSLKKI 480
++ Y + L++++ + P DDSL+K+
Sbjct: 505 QKHYKVLHDYLLQIETTFDENETPNTKKDRMMREDDSLRKL 545
>gi|112362579|emb|CAL36022.1| HDF1 protein [Saccharomyces cerevisiae]
Length = 602
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 99/221 (44%), Gaps = 25/221 (11%)
Query: 278 IKGYRYGPQVVPISSAEWEAV---KFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 334
+K Y YG + +S ++ + V + + +K++GF +S + ++ D + FI P
Sbjct: 332 VKVYPYGDLDINLSDSQDQIVMEAYTQKDAFLKIIGFRSSSKSIHYFNNIDKSSFIV-PD 390
Query: 335 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLP 394
++ ++ LA +K + K + +W + + + + T + S + + FY +P
Sbjct: 391 EAKYEGSIRTLASLLKILRKKDKIAILWGKLKSNSHPSLYTLSPSSVKDYNEGFYLYRVP 450
Query: 395 FAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD--LAPSGKGEILQPELTPNPAL 452
F +++R +FPS +S+ + + DN+ K+ + + P NP L
Sbjct: 451 FLDEIR--KFPSL----LSYDDGSEHKLDYDNMKKVTQSIMGYFNLRDGYNPSDFKNPLL 504
Query: 453 ERFY-----HHLELKSEHQDAAPPPL--------DDSLKKI 480
++ Y + L++++ + P DDSL+K+
Sbjct: 505 QKHYKVLHDYLLQIETTFDENETPNTKKDRMMREDDSLRKL 545
>gi|6323940|ref|NP_014011.1| Yku70p [Saccharomyces cerevisiae S288c]
gi|1346259|sp|P32807.2|KU70_YEAST RecName: Full=ATP-dependent DNA helicase II subunit 1; AltName:
Full=ATP-dependent DNA helicase II subunit Ku70;
AltName: Full=High affinity DNA-binding factor subunit 1
gi|287606|dbj|BAA03648.1| NES24 [Saccharomyces cerevisiae]
gi|825550|emb|CAA89782.1| Nes24p [Saccharomyces cerevisiae]
gi|112362573|emb|CAL36025.1| HDF1 protein [Saccharomyces cerevisiae]
gi|112362577|emb|CAL36023.1| HDF1 protein [Saccharomyces cerevisiae]
gi|112362581|emb|CAL36021.1| HDF1 protein [Saccharomyces cerevisiae]
gi|112362583|emb|CAL36020.1| HDF1 protein [Saccharomyces cerevisiae]
gi|112362585|emb|CAL36019.1| HDF1 protein [Saccharomyces cerevisiae]
gi|112362587|emb|CAL36018.1| HDF1 protein [Saccharomyces cerevisiae]
gi|112362591|emb|CAL36016.1| HDF1 protein [Saccharomyces cerevisiae]
gi|112362593|emb|CAL36015.1| HDF1 protein [Saccharomyces cerevisiae]
gi|112362597|emb|CAL36013.1| HDF1 protein [Saccharomyces cerevisiae]
gi|207342065|gb|EDZ69944.1| YMR284Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256270684|gb|EEU05847.1| Yku70p [Saccharomyces cerevisiae JAY291]
gi|259148872|emb|CAY82117.1| Yku70p [Saccharomyces cerevisiae EC1118]
gi|285814290|tpg|DAA10185.1| TPA: Yku70p [Saccharomyces cerevisiae S288c]
gi|392297457|gb|EIW08557.1| Yku70p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 602
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 99/221 (44%), Gaps = 25/221 (11%)
Query: 278 IKGYRYGPQVVPISSAEWEAV---KFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 334
+K Y YG + +S ++ + V + + +K++GF +S + ++ D + FI P
Sbjct: 332 VKVYPYGDLDINLSDSQDQIVMEAYTQKDAFLKIIGFRSSSKSIHYFNNIDKSSFIV-PD 390
Query: 335 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLP 394
++ ++ LA +K + K + +W + + + + T + S + + FY +P
Sbjct: 391 EAKYEGSIRTLASLLKILRKKDKIAILWGKLKSNSHPSLYTLSPSSVKDYNEGFYLYRVP 450
Query: 395 FAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD--LAPSGKGEILQPELTPNPAL 452
F +++R +FPS +S+ + + DN+ K+ + + P NP L
Sbjct: 451 FLDEIR--KFPSL----LSYDDGSEHKLDYDNMKKVTQSIMGYFNLRDGYNPSDFKNPLL 504
Query: 453 ERFY-----HHLELKSEHQDAAPPPL--------DDSLKKI 480
++ Y + L++++ + P DDSL+K+
Sbjct: 505 QKHYKVLHDYLLQIETTFDENETPNTKKDRMMREDDSLRKL 545
>gi|402589545|gb|EJW83477.1| hypothetical protein WUBG_05614 [Wuchereria bancrofti]
Length = 386
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 77/369 (20%), Positives = 145/369 (39%), Gaps = 57/369 (15%)
Query: 2 ARTREALLLLLDVSPSMH------SVLPDVEKLCSRLIQKKLIYGKNHEVGVILFGTEET 55
A E ++L+DV +M + + + +I +K+ + ++LFG+E T
Sbjct: 14 AARHECTVILIDVGANMSREGVETTDMQLAKDTVEWIITRKIFTESIDKFTLMLFGSEVT 73
Query: 56 ENELTKEVGGYEHVKVLQDIKV-----VDGHLVQSLK----HLPQGTCAGDYML--IKKY 104
+N +T + + + + +Q K+ +D + S L A DYM ++ Y
Sbjct: 74 QNPITTDENIFFYEEEMQQAKIDWLRFIDNEIKPSKSTNGDFLAALIAALDYMRNHLENY 133
Query: 105 GETYKGKKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFGLRMKNIVVRASLSGEPH 164
E+ +++ L+T+ L D E+ V I M A + + +P
Sbjct: 134 PESNITVRNILLVTN----LGGFDENVDEECVGAIINGMKALEINFSVVGPSFEKLSKPK 189
Query: 165 MRVIIENDNLLNIFSKKSS---------AKTLFVDSTTSLRGARKT---------RDISP 206
+I ++ + + K S+ A+ + D T G + R +
Sbjct: 190 DEIISSEESAIKLEGKLSNTMQSFRMEPAERILTDILTQTGGVIYSFSEALPVLQRFVPR 249
Query: 207 VTIFRGD---LELSEKMKIKVWVYKKTGEEKFP-TLKKYS-------------DKAPSTD 249
RG LEL K+ + +YKK F +KY+ +K +
Sbjct: 250 KVKVRGQKFYLELGIDFKLPLQMYKKIQPTDFKLATQKYASITDVQLKRKTIYEKCVKDE 309
Query: 250 KFATHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPE-KSVKL 308
K + D + PS + E+ IKGY++G +VP + + + +KPE + +KL
Sbjct: 310 KVDDGDDNADRVGNLSQGPSSKISKEETIKGYKFGTTIVPYNEEDQKEYGWKPENRCLKL 369
Query: 309 LGFTDASNI 317
+ FT S +
Sbjct: 370 IQFTKRSQV 378
>gi|332028750|gb|EGI68781.1| ATP-dependent DNA helicase 2 subunit 1 [Acromyrmex echinatior]
Length = 509
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 65/136 (47%), Gaps = 20/136 (14%)
Query: 5 REALLLLLDVSPSMHSVLPDVE-----------KLCSRLIQKKLIYGKNHEVGVILFGTE 53
REA L L+D + M D++ KL +++++KL + +GV+LFGTE
Sbjct: 18 REATLFLVDCTEKMFMHSSDIDDKKITYIEKFFKLYKQILRQKLAWSMQDWMGVVLFGTE 77
Query: 54 ETENELTKEVGGYEHVKVLQDIKVV---DGHLVQSLKHLPQGTCAGDYMLIKKYGETYKG 110
++++ + +++ LQ+++VV D ++ L L A + K E+ K
Sbjct: 78 KSDSN-----SPWTNIQTLQELRVVTLDDLQQIRKLSKLQSINVAYSLKINMKGYESMKL 132
Query: 111 KKHLCLITDALCPLKD 126
K + L+ DAL D
Sbjct: 133 KNN-ALLLDALTYATD 147
>gi|340509175|gb|EGR34734.1| hypothetical protein IMG5_003060 [Ichthyophthirius multifiliis]
Length = 360
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 85/190 (44%), Gaps = 28/190 (14%)
Query: 338 ATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTP-----NVSEKINIPDSFYFNV 392
+T AL + M ++A+ + + R+G Q + VL P N ++ P F+
Sbjct: 126 STQMFDALIKQMNIQKQIAVTKIIVRKGSQ-LRFAVLLPQEEEYNYNDHTQTPPGFHLIF 184
Query: 393 LPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELT--PNP 450
LP+ +++ +K P Q ++ + ++K+ L +G EI +L +P
Sbjct: 185 LPYGDEI--------NKIPTLKQ--RKKNLVSIEMLKVTQLLING-LEIKDFDLRNFEDP 233
Query: 451 ALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAF--CGQF--VIKE 506
L++FY HL+ + ++A P +DD L +PD L I+ F C Q +
Sbjct: 234 QLQKFYSHLQAHA-LEEAEPEQIDDLL----QPDSQKLETYSEMINLFKDCLQIESETEN 288
Query: 507 NPKLKKSTRR 516
N LK+ +R
Sbjct: 289 NQYLKQQKKR 298
>gi|256751506|ref|ZP_05492383.1| Ku protein [Thermoanaerobacter ethanolicus CCSD1]
gi|256749590|gb|EEU62617.1| Ku protein [Thermoanaerobacter ethanolicus CCSD1]
Length = 270
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 63/152 (41%), Gaps = 14/152 (9%)
Query: 247 STDKFATHEVKVDYEYKSVEDPSKVVP-------PEQRIKGYRYGP-QVVPISSAEWEAV 298
+T+ A H ++ E KS K+ P E+ ++GY Y P + V I + E +
Sbjct: 23 ATEDHAIHFRQLHKECKSPIKYEKICPVCNRPVSDEEIVRGYEYEPGKFVIIDDEDLERI 82
Query: 299 KFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIV 358
K++ ++ FTD I YY D FI T L +MKE +VAI
Sbjct: 83 PMPTVKTIDIVDFTDIGQIDPIYY--DKTYFIV--PEDIGTKPYVLLRDSMKETKRVAIA 138
Query: 359 RCVWRQGQQSVVVGVLTPN--VSEKINIPDSF 388
+ V R Q + V V E ++ PD
Sbjct: 139 KVVIRSKQNLACIRVYDEKYMVLETMHFPDEI 170
>gi|112362621|emb|CAL36001.1| HDF1 protein [Saccharomyces paradoxus]
Length = 602
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 111/239 (46%), Gaps = 30/239 (12%)
Query: 278 IKGYRYGPQVVPISSAEWEAV---KFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 334
+K Y YG + +S + + V + + ++++GF ++ + ++ D + FI P
Sbjct: 332 VKVYPYGDLDINLSDNQDQIVMEAYTQKDAFLRIIGFRSSNKSIHYFNNIDKSSFIV-PD 390
Query: 335 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSV--VVGVLTPNVSEKINIPDSFYFNV 392
++ ++ LA +K + K + +W + + + + +L+P+ +++ N + FY
Sbjct: 391 EAKYEGSIRTLASLLKTLRKKDKIAMLWGKLKSNSHPSLFILSPSSAKEYN--EGFYLYR 448
Query: 393 LPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD--LAPSGKGEILQPELTPNP 450
+PF +++R +FPS +S+ + + DN+ K+ + + P NP
Sbjct: 449 VPFLDEIR--KFPSL----LSYDDGSEHKLDYDNMKKITQSIMGHFNLRDGYNPSEFKNP 502
Query: 451 ALERFY-----HHLELKSEHQDAAPPPL--------DDSLKKITEPDPTLLAESQSAID 496
L++ Y + L++++ ++ P DDSL+K+ +L ES+ A D
Sbjct: 503 LLQKHYKVLHDYLLQIETTFEENEKPNAKKDRVMREDDSLRKLYYIRNKIL-ESEKADD 560
>gi|62822090|gb|AAY14659.1| unknown [Homo sapiens]
Length = 163
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 62/111 (55%), Gaps = 15/111 (13%)
Query: 1 MART--REALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFG 51
M R+ + A++L +DV +M + +P +E K+ + +Q+++ E+ ++LFG
Sbjct: 1 MVRSGNKAAVVLCMDVGFTMSNSIPGIESPFEQAKKVITMFVQRQVFAENKDEIALVLFG 60
Query: 52 TEETENELTKEVGG--YEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDYM 99
T+ T+N L+ GG Y+++ V + + + D L++ ++ Q G+ D++
Sbjct: 61 TDGTDNPLS---GGDQYQNITVHRHLMLPDFDLLEDIESKIQPGSQQADFL 108
>gi|326203361|ref|ZP_08193226.1| Ku protein [Clostridium papyrosolvens DSM 2782]
gi|325986619|gb|EGD47450.1| Ku protein [Clostridium papyrosolvens DSM 2782]
Length = 310
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 53/106 (50%), Gaps = 5/106 (4%)
Query: 269 SKVVPPEQRIKGYRYGP-QVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN 327
+K V P+ ++G+ Y P + V +S ++E+++ K EK+V++L F + Y+ K
Sbjct: 52 NKEVQPDDIVRGFEYEPGKYVIMSGEDFESLQVKSEKAVEILDFVKLEEVDPVYFDKTYF 111
Query: 328 LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGV 373
L E G A + L A+ + K+A+ + R + V+ V
Sbjct: 112 LAPQETGGK----AYTLLREALGQKEKIAVAKITIRDRESLAVIRV 153
>gi|367009714|ref|XP_003679358.1| hypothetical protein TDEL_0B00180 [Torulaspora delbrueckii]
gi|359747016|emb|CCE90147.1| hypothetical protein TDEL_0B00180 [Torulaspora delbrueckii]
Length = 582
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 98/222 (44%), Gaps = 27/222 (12%)
Query: 279 KGYRYGPQVVPISSAEWEAVK--FKPEKS-VKLLGFTDASNILRHYY--MKDVNLFIAEP 333
K Y YG + +S ++ ++ + E+S +K++GF L HYY ++ + +
Sbjct: 319 KVYPYGDLDIELSESDIAEIRNDYAGEESFLKVIGFQSTETCL-HYYNNIEKATFVVPDE 377
Query: 334 GNSRATV-AVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNV 392
G ++ +S+L + +++ NKVAIV W + + + + S++ + + FY
Sbjct: 378 GRYEGSIRTLSSLFKNLRQKNKVAIV---WGKLKSNSNPAIFFFVPSDEASPNEGFYLYR 434
Query: 393 LPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPAL 452
+PF +++R S + E +EA L+ +L +P NP L
Sbjct: 435 VPFLDELRRIPPMLISHGEIQDDDYENLKEATKKLINHFNLKNG-----FEPSEFKNPGL 489
Query: 453 ERFY---HHLELKSEH---------QDAAPPPLDDSLKKITE 482
++ + H L+ E Q + DDSL++I++
Sbjct: 490 QKHFKILHDYLLQIEEEPEKDDVEWQRSKLLEEDDSLRRISQ 531
>gi|336365738|gb|EGN94087.1| hypothetical protein SERLA73DRAFT_63055 [Serpula lacrymans var.
lacrymans S7.3]
Length = 228
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 50/110 (45%), Gaps = 21/110 (19%)
Query: 9 LLLLDVSPSMHSV----LP--------DVE--------KLCSRLIQKKLIYG-KNHEVGV 47
+ L+D+SPSM ++ LP VE + IQ+ + G K + GV
Sbjct: 5 IFLVDISPSMGAMRTVDLPPGPKGEQGTVEMTNLEWSMQFVKLKIQEMIFNGRKTDQCGV 64
Query: 48 ILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGD 97
I+FG+E+T+N + + GGYEHV + + + L L GD
Sbjct: 65 IVFGSEDTDNVINDKSGGYEHVSEYIPVAQPNAGTLTKLDALSPSEVTGD 114
>gi|397495811|ref|XP_003818739.1| PREDICTED: X-ray repair cross-complementing protein 5-like, partial
[Pan paniscus]
Length = 120
Score = 40.4 bits (93), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 593 NSNEGINYPKAVELLVALRKGCILEQEPKQFNDVLEKVCKICRKRNFSTFFDFLMSKKLS 652
++NE + K+++ + A R+ I E ++FN+ L+ + + + + F++ ++ ++
Sbjct: 13 DTNETPYFMKSIDCIRAFREEAIKFSEEQRFNNFLKALREKVEIKQLNHFWEIVVQDGIT 72
Query: 653 LISKSEAVDSDITDDEAGSFIV-KSQP 678
LI+K EA S +T +EA F+ K +P
Sbjct: 73 LITKEEASGSSVTAEEAKKFLAPKDKP 99
>gi|237748320|ref|ZP_04578800.1| Ku protein [Oxalobacter formigenes OXCC13]
gi|229379682|gb|EEO29773.1| Ku protein [Oxalobacter formigenes OXCC13]
Length = 262
Score = 40.4 bits (93), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 68/142 (47%), Gaps = 15/142 (10%)
Query: 262 YKSVEDPSKVVPPEQRIKGYRY-GPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRH 320
Y+ + + E ++G++Y + V ++ + E +K + + S+ +L FTD S+I
Sbjct: 43 YRKTDGAGHELKNEDIVRGFQYEKDRYVIVTDDDIEKIKTEKDNSIDILLFTDLSSIPTV 102
Query: 321 YYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSE 380
Y+ K ++ G+ +A L RAMK+ KVAI + V G + ++ + V E
Sbjct: 103 YFNKSYYC-VSGKGSEKA---FELLQRAMKDTGKVAIGKTVI--GTKETMLAL----VPE 152
Query: 381 KINIPDSFYFNVLPFAEDVREF 402
K D L F +++RE
Sbjct: 153 K----DGILLQTLYFHDEIREI 170
>gi|112362617|emb|CAL36003.1| HDF1 protein [Saccharomyces paradoxus]
gi|112362619|emb|CAL36002.1| HDF1 protein [Saccharomyces paradoxus]
Length = 602
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 111/239 (46%), Gaps = 30/239 (12%)
Query: 278 IKGYRYGPQVVPISSAEWEAV---KFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 334
+K Y YG + +S + + V + + ++++GF ++ + ++ D + FI P
Sbjct: 332 VKVYPYGDLDINLSDNQDQIVMEAYTQKDAFLRIIGFRSSNKSIHYFNNIDKSSFIV-PD 390
Query: 335 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSV--VVGVLTPNVSEKINIPDSFYFNV 392
++ ++ LA +K + K + +W + + + + +L+P+ +++ N + FY
Sbjct: 391 EAKYEGSIRTLASLLKTLRKKDKIAMLWGKLKSNSHPSLFILSPSSAKEYN--EGFYLYR 448
Query: 393 LPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD--LAPSGKGEILQPELTPNP 450
+PF +++R +FPS +S+ + + DN+ K+ + + P NP
Sbjct: 449 VPFLDEIR--KFPSL----LSYDDGSEHKLDYDNMKKITQSIMGHFNLRDGYNPSEFKNP 502
Query: 451 ALERFY-----HHLELKSEHQDAAPPPL--------DDSLKKITEPDPTLLAESQSAID 496
L++ Y + L++++ ++ P DDSL+K+ +L ES+ A D
Sbjct: 503 LLQKHYKVLHDYLLQIETTFEENEKPNAKKDRVMREDDSLRKLYYIRNKIL-ESEKADD 560
>gi|340385866|ref|XP_003391429.1| PREDICTED: x-ray repair cross-complementing protein 5-like
[Amphimedon queenslandica]
Length = 258
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 45/103 (43%), Gaps = 7/103 (6%)
Query: 309 LGFTDASNILRHYYMKDVN-LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQ 367
+GF S + H+Y+K N ++ E S +T S L R VA+ + + R
Sbjct: 1 MGFRPKSKMKMHHYIKPANFIYPDETTVSGSTKLFSVLLRRCISREVVAVCKYIPRNNSP 60
Query: 368 SVVVGVLTPNVSE----KINI-PDSFYFNVLPFAEDVREFQFP 405
+ V L P E I I P F+ LPF+ED+R P
Sbjct: 61 PIFVA-LVPQEEELDDSSIQISPPGFHVIFLPFSEDIRSLDLP 102
>gi|335039620|ref|ZP_08532775.1| DNA repair protein [Caldalkalibacillus thermarum TA2.A1]
gi|334180477|gb|EGL83087.1| DNA repair protein [Caldalkalibacillus thermarum TA2.A1]
Length = 270
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 5/103 (4%)
Query: 272 VPPEQRIKGYRYGP-QVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFI 330
V ++ +KGY Y V + E EA+ K++ ++ F I Y+ + L
Sbjct: 55 VDQDEIVKGYEYDKGHFVVLDDDELEAIAAAKSKTIDIIDFIQLKEIDPIYFNRSYFLGP 114
Query: 331 AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGV 373
E G A + L RAM+E KVAI + + R +Q + V
Sbjct: 115 TENGEK----AYTLLKRAMEETEKVAIAKFILRAKEQLAAIRV 153
>gi|296818197|ref|XP_002849435.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
gi|238839888|gb|EEQ29550.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
Length = 608
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 97/256 (37%), Gaps = 64/256 (25%)
Query: 279 KGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSR 337
K Y++G + + + E ++ E +++++GF S++ MK ++ +E G +
Sbjct: 354 KAYKFGGEQISFTQEEQAELRNFGEPTIRIIGFKPLSSLPIWASMKHPTFIYPSEEGRNA 413
Query: 338 ATVAVSALARAMK-EMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLPFA 396
A V + +A A K + N I IP + LPFA
Sbjct: 414 APVMAAMIAGAEKLDENDTQI--------------------------IPPGMWILPLPFA 447
Query: 397 EDVREFQFPSFSKFPVSWQPNEQQQEAADNLV-------KMLDLAPSGKGEILQPELTPN 449
+D+R+ P + D+LV + L L P GK P PN
Sbjct: 448 DDIRQ-------------NPETNHITSPDSLVDKMRPIIQQLQL-PKGK---FDPYKYPN 490
Query: 450 PALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAFCGQFVIKENPK 509
P+L+ Y L+ + +D P D ++ K AID G+ VI +
Sbjct: 491 PSLQWHYRILQALALDEDVPEQPEDKTIPKY------------RAIDKRAGELVIAWGEE 538
Query: 510 LKKSTRRFLREKPSGS 525
L+ R + +P S
Sbjct: 539 LESQYRTLEKSQPVTS 554
>gi|190408510|gb|EDV11775.1| yeast Ku70 protein [Saccharomyces cerevisiae RM11-1a]
Length = 602
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 99/221 (44%), Gaps = 25/221 (11%)
Query: 278 IKGYRYGPQVVPISSAEWEAV---KFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 334
+K Y YG + +S ++ + V + + +K++GF +S + ++ D + FI P
Sbjct: 332 VKVYPYGDLDINLSDSQDQIVMEAYTQKDAFLKIIGFRSSSKSIHYFNNIDKSSFIV-PD 390
Query: 335 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLP 394
++ ++ LA +K + K + +W + + + + T + S + + FY +P
Sbjct: 391 EAKYEGSIRTLASLLKILRKKDKIAILWGKLKSNSHPSLYTLSPSSVKDYNEGFYLYRVP 450
Query: 395 FAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD--LAPSGKGEILQPELTPNPAL 452
F +++R +FPS +S+ + + DN+ K+ + + P NP L
Sbjct: 451 FLDEIR--KFPSL----LSYDDGSEHKLDYDNVKKVTQSIMGYFNLRDGYNPSDFKNPLL 504
Query: 453 ERFY-----HHLELKSEHQDAAPPPL--------DDSLKKI 480
++ Y + L++++ + P DDSL+K+
Sbjct: 505 QKHYKVLHDYLLQIETTFDENETPNTKKDRMMREDDSLRKL 545
>gi|162450936|ref|YP_001613303.1| hypothetical protein sce2664 [Sorangium cellulosum So ce56]
gi|161161518|emb|CAN92823.1| hypothetical protein sce2664 [Sorangium cellulosum So ce56]
Length = 320
Score = 40.0 bits (92), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 77/183 (42%), Gaps = 41/183 (22%)
Query: 278 IKGYRY--GPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIA---E 332
++GY Y G VV +S + + ++V +L F DAS I YY D F+A +
Sbjct: 62 VRGYPYEKGEYVV-LSDEDLRRANVEATQTVDILDFVDASEIDPIYY--DKPYFLAPASQ 118
Query: 333 PGNSRATVAVSALAR-AMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFN 391
G R+ V L R A+++ KV I + V R + + + P+ N
Sbjct: 119 NGKKRSPVTAYVLLREALRKTGKVGIAKVVIRTREH---IAAVRPHGR-------GLVLN 168
Query: 392 VLPFAEDVR---EFQFPSF-------------------SKFPVSWQPNEQQQEAADNLVK 429
+L FA ++R E P ++ +W+P + + E D+++K
Sbjct: 169 LLRFAHELRSDEELDLPEMDAQGKGLGKRELEMAERLVAEMATAWEPEKYKDEYRDDVMK 228
Query: 430 MLD 432
+++
Sbjct: 229 LIE 231
>gi|147677577|ref|YP_001211792.1| hypothetical protein PTH_1242 [Pelotomaculum thermopropionicum SI]
gi|146273674|dbj|BAF59423.1| uncharacterized conserved protein [Pelotomaculum thermopropionicum
SI]
Length = 286
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 70/150 (46%), Gaps = 18/150 (12%)
Query: 272 VPPEQRIKGYRY--GPQVVPISSAEWEAVKFK-PEKSVKLLGFTDASNILRHYYMKDVNL 328
VP ++ ++GY Y G VV ++ A++E + + ++SV++L F D + I YY K L
Sbjct: 55 VPLDEIVRGYEYEKGRYVV-LTEADFENLAGEDGKRSVEILDFVDLAEIDPLYYEKAYYL 113
Query: 329 FIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSF 388
PG+ A V L RAM E K A+ R R Q + V ++
Sbjct: 114 ---APGDGGAKV-YELLKRAMSETGKAAVARVAIRSRQSLAAIRVSG----------NAL 159
Query: 389 YFNVLPFAEDVREFQFPSFSKFPVSWQPNE 418
N++ + +++++ ++ VS NE
Sbjct: 160 VMNLMHYPDEIQKADAIPEMQYEVSLHQNE 189
>gi|388856813|emb|CCF49600.1| related to ATP-dependent DNA helicase II, 70 kDa subunit [Ustilago
hordei]
Length = 716
Score = 39.7 bits (91), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 13/96 (13%)
Query: 5 REALLLLLDVSPSMHSVLPDVE--------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
++ +L +D PSMH + P K + L+QKKLI + VG+++F ET
Sbjct: 39 KDMVLFCIDAGPSMHRIDPTANTSPLYFALKAAASLMQKKLISSPHDHVGLLIFNCAETL 98
Query: 57 NELTKE----VGGYEHVKVLQDIKVVDGHLVQSLKH 88
K G YE ++ ++ + V D + +++L H
Sbjct: 99 FRSAKPGEYYKGSYE-LQSVRQVNVPDTYNLKALLH 133
>gi|392394601|ref|YP_006431203.1| Ku protein [Desulfitobacterium dehalogenans ATCC 51507]
gi|390525679|gb|AFM01410.1| Ku protein [Desulfitobacterium dehalogenans ATCC 51507]
Length = 320
Score = 39.7 bits (91), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 54/137 (39%), Gaps = 15/137 (10%)
Query: 253 THEVKVDYEYKSVEDPSKV----------VPPEQRIKGYRYGPQVVPISSAEWEAVKFKP 302
THE +Y +K + + V E +KGY Y I E A P
Sbjct: 26 THEFHFNYLHKDCHNRLRYIKKCPHCEVEVAAENIVKGYEYEKDHYVIMEEEDLATLEAP 85
Query: 303 -EKSVKLLGFTDASNILRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCV 361
+S+ +L F D S+I YY K L E + A L +AM + KVAI +
Sbjct: 86 MSRSIDILDFIDLSDIDPVYYQKSYYLSPEETAHK----AYKLLCQAMSDTGKVAIAKLT 141
Query: 362 WRQGQQSVVVGVLTPNV 378
R Q + V+ NV
Sbjct: 142 MRSKQHLACLRVIDQNV 158
>gi|323335992|gb|EGA77268.1| Yku70p [Saccharomyces cerevisiae Vin13]
Length = 537
Score = 39.7 bits (91), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 38/184 (20%), Positives = 84/184 (45%), Gaps = 12/184 (6%)
Query: 278 IKGYRYGPQVVPISSAEWEAV---KFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEPG 334
+K Y YG + +S ++ + V + + +K++GF +S + ++ D + FI P
Sbjct: 332 VKVYPYGDLDINLSDSQDQIVMEAYTQKDAFLKIIGFRSSSKSIHYFNNIDKSSFIV-PD 390
Query: 335 NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNVLP 394
++ ++ LA +K + K + +W + + + + T + S + + FY +P
Sbjct: 391 EAKYEGSIRTLASLLKILRKKDKIAILWGKLKSNSHPSLYTLSPSSVKDYNEGFYLYRVP 450
Query: 395 FAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLD--LAPSGKGEILQPELTPNPAL 452
F +++R +FPS +S+ + + DN+ K+ + + P NP L
Sbjct: 451 FLDEIR--KFPSL----LSYDDGSEHKLDYDNMKKVTQSIMGYFNLRDGYNPSDFKNPLL 504
Query: 453 ERFY 456
++ Y
Sbjct: 505 QKHY 508
>gi|290970691|ref|XP_002668219.1| predicted protein [Naegleria gruberi]
gi|284081492|gb|EFC35475.1| predicted protein [Naegleria gruberi]
Length = 225
Score = 39.7 bits (91), Expect = 5.2, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 6/102 (5%)
Query: 303 EKSVKLLGFTDASNI-LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCV 361
+ +KL+GF S + + H Y L+ + + + + +SAL + M EMN++AI R +
Sbjct: 116 QPGIKLIGFKPKSRLKIYHNYKSSGFLYPNDSKINGSLLTLSALHKKMIEMNRIAICRFI 175
Query: 362 WRQGQQSVVVGVLTPN--VSEKIN---IPDSFYFNVLPFAED 398
R+G + +L + E+ N P F LP+A++
Sbjct: 176 QREGTMPQFIALLPQEELIDEESNTQITPPGFQIIYLPYADE 217
>gi|365879007|ref|ZP_09418451.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 375]
gi|365292995|emb|CCD90982.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 375]
Length = 309
Score = 39.7 bits (91), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 14/101 (13%)
Query: 267 DPSKVVPPEQRIKGYRY-GPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI-----LRH 320
D + VP E +KGY Q + +S E E + + +++++ F D ++I +R
Sbjct: 53 DTGEEVPNEDIVKGYELEKGQYIEVSKEELEEIALESTRTIEIDEFVDKTDIDPRYLIRP 112
Query: 321 YYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCV 361
YY++ P A + + ++EMNKVAI R V
Sbjct: 113 YYLR--------PDGKVGHDAFAVIRETIREMNKVAIGRIV 145
>gi|71022129|ref|XP_761295.1| hypothetical protein UM05148.1 [Ustilago maydis 521]
gi|46097789|gb|EAK83022.1| hypothetical protein UM05148.1 [Ustilago maydis 521]
Length = 713
Score = 39.7 bits (91), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 13/96 (13%)
Query: 5 REALLLLLDVSPSMHSVLPDVE--------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
++ +L +D PSMH + P K + L+QKKLI + VGV++F +T
Sbjct: 39 KDMVLFCIDAGPSMHRIDPATNTSPLYSALKAAASLMQKKLISSPHDHVGVLIFNCADTL 98
Query: 57 NELTKE----VGGYEHVKVLQDIKVVDGHLVQSLKH 88
K G YE ++ ++ + V D + +++L H
Sbjct: 99 FHSVKPGEYYKGSYE-LQSVRQVNVPDTYNLKALLH 133
>gi|302758134|ref|XP_002962490.1| hypothetical protein SELMODRAFT_165509 [Selaginella moellendorffii]
gi|300169351|gb|EFJ35953.1| hypothetical protein SELMODRAFT_165509 [Selaginella moellendorffii]
Length = 564
Score = 39.7 bits (91), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 97/229 (42%), Gaps = 26/229 (11%)
Query: 283 YGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN-LFIAEPGNSRATVA 341
Y + V ++ E VK + V+LLGF + + ++ ++ L+ +E +T
Sbjct: 266 YNSKRVLMTREELAEVKKITDVQVRLLGFKSIACLKDYHNLRPATFLYPSEEAIKGSTCL 325
Query: 342 VSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPN---VSEKINI-PDSFYFNVLPFAE 397
AL R++ K A+ + S + L P V+E + P + LP+AE
Sbjct: 326 FIALHRSLIRQKKFALA---FHGNSTSPHLVALVPQEEIVNEYGQVQPPGMHMIYLPYAE 382
Query: 398 DVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYH 457
D+R+ + + SK V E +A L+K L L +I NPAL+R Y
Sbjct: 383 DIRQPEKINLSKGGVEIAAKEHIDKAM-ALIKKLHLREFTVYDI------QNPALQRHYS 435
Query: 458 HLELKSEHQDAAPPPLDDSLKKITEPD------PTLLAESQSAIDAFCG 500
+L+ +D + ++ T PD P+++A Q+ D G
Sbjct: 436 NLQALGLQEDTV-----EDVEDCTLPDEEGMKRPSIVAVVQAFKDTVYG 479
>gi|159482074|ref|XP_001699098.1| DNA binding protein [Chlamydomonas reinhardtii]
gi|158273161|gb|EDO98953.1| DNA binding protein [Chlamydomonas reinhardtii]
Length = 661
Score = 39.3 bits (90), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 84/207 (40%), Gaps = 37/207 (17%)
Query: 208 TIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVED 267
T+ R +LS+ I V Y + KK + P+T+ +K Y SV D
Sbjct: 294 TLMRLRWQLSDNAAISVRAYLLISDAA-KAAKKMTPFNPTTN----MPLKAVTSYVSVSD 348
Query: 268 PSKVVPP---EQRIKGYRYG-----PQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILR 319
+ + P QR+ R G P+VV + E P + LLGF S L+
Sbjct: 349 GALLDRPTAAAQRVFELRTGNRARLPEVVASAPEVAEQAALAP-SGLALLGFKPRS-CLQ 406
Query: 320 HYYMKDVNLFI-----AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL 374
++ LF+ + PG+ T A AL RAM +++AI R V
Sbjct: 407 LWHQTRSALFLRPDERSAPGS---TAAFIALWRAMLSQDRIAICRP----------VCAA 453
Query: 375 TPNVSEKINIPDSFYFNVLPFAEDVRE 401
P SE + Y LPFA+D+R+
Sbjct: 454 LPMASEAPGM----YLIHLPFADDIRQ 476
>gi|408393271|gb|EKJ72536.1| hypothetical protein FPSE_07173 [Fusarium pseudograminearum CS3096]
Length = 1808
Score = 39.3 bits (90), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 90/202 (44%), Gaps = 15/202 (7%)
Query: 265 VEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI-LRHYYM 323
ED +KV+ K Y++G + V + E +++K ++++GF S++ +
Sbjct: 321 AEDNAKVIEKGDIKKAYKFGGEYVYFTPDEQKSLKDFGSPIIRIIGFKPRSSLPVWASTK 380
Query: 324 KDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVL-----TPNV 378
K +F +E ++ +AL + + + +K+ I C+ R Q ++ ++ + +
Sbjct: 381 KSTFIFPSEEDYIGSSRVFTALWQKLLKDDKMGIAWCITRANAQPMLAAIIPSRERSDDD 440
Query: 379 SEKINIPDSFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGK 438
S +P + LPF +D+R PS + +++ +V+ L L +
Sbjct: 441 SGTPYLPAGLWIYPLPFQDDLRNINPPS-----EVLRTSDELTTQMRTIVQQLQLPKA-- 493
Query: 439 GEILQPELTPNPALERFYHHLE 460
+ P PNPAL+ Y L+
Sbjct: 494 --MYNPSKYPNPALQWHYRILQ 513
>gi|112362603|emb|CAL36010.1| HDF1 protein [Saccharomyces kudriavzevii]
Length = 560
Score = 39.3 bits (90), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 43/222 (19%), Positives = 99/222 (44%), Gaps = 23/222 (10%)
Query: 278 IKGYRYGPQVVPISSAEWEAV---KFKPEKSVKLLGFTDASNILRHYYMKDVNLFIA--E 332
+K Y YG + S + + V + + ++++GF +S + ++ + + FI E
Sbjct: 332 VKVYPYGDLDINFSENQNQIVMEAYTQKDAFLRIIGFRSSSKAIHYFNNIEKSTFIVPDE 391
Query: 333 PGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYFNV 392
+ +++L + +++ +K+AI+ + + + VL+P+ ++ N + FY
Sbjct: 392 AKYEGSVRTLTSLFKTLRKKDKIAILWGKLKSNSHASLF-VLSPSSIKEYN--EGFYLYR 448
Query: 393 LPFAEDVREF----QFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTP 448
+PF +++R+F + + K+ + + E ++ N++ +L P
Sbjct: 449 VPFLDEIRKFPSLLSYDNGEKYKLDY---ENMKKITQNIIGYFNLKDG-----YNPSDFK 500
Query: 449 NPALERFY---HHLELKSEHQDAAPPPLDDSLKKITEPDPTL 487
NP+L++ + H L+ E D L KI D +L
Sbjct: 501 NPSLQKHFKVLHDYLLQIETTPEGNETPDAKLNKIIHEDDSL 542
>gi|149015963|gb|EDL75244.1| X-ray repair complementing defective repair in Chinese hamster
cells 5, isoform CRA_b [Rattus norvegicus]
Length = 228
Score = 39.3 bits (90), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 70/139 (50%), Gaps = 20/139 (14%)
Query: 4 TREALLLLLDVSPSMHSVLPDVE-------KLCSRLIQKKLIYGKNHEVGVILFGTEETE 56
+ A++L +DV +M + P E K+ + +Q+++ E+ ++L+GTE T+
Sbjct: 6 NKAAVVLCMDVGVAMGNSFPGEESPLEQAKKVMTMFVQRQVFSESKDEIALVLYGTESTD 65
Query: 57 NELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQ-GTCAGDYM--------LIKK--YG 105
N L + Y+++ V + + + D L++ + + Q + D++ LI++ G
Sbjct: 66 NALAGK-DQYQNITVHRHLMLPDFDLLEDIGNKIQPSSQQADFLDALIVCMDLIQRETIG 124
Query: 106 ETYKGKKHLCLITDALCPL 124
+ + GKKH+ + TD P
Sbjct: 125 KKF-GKKHIEVFTDLSSPF 142
>gi|395540722|ref|XP_003772300.1| PREDICTED: X-ray repair cross-complementing protein 6 [Sarcophilus
harrisii]
Length = 610
Score = 39.3 bits (90), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 93/439 (21%), Positives = 176/439 (40%), Gaps = 64/439 (14%)
Query: 5 REALLLLLDVSPSMHSVLPDVEK----LCSRLIQK----KLIYGKNHEVGVILFGTEETE 56
R++L+ L+D S +M + + + L + IQ K+I + V+ +GT++ +
Sbjct: 34 RDSLIFLVDASKAMFELQAEDGRTSFDLTIQCIQSVYSSKIISSDRDLLAVVFYGTDKDK 93
Query: 57 NELTKEVGGYEHVKVLQDIKVVDGHLVQSL---------KHLPQGT-CAGDYMLIKKY-- 104
N + + ++ VL ++ + + +L KH + C DY L +
Sbjct: 94 NSVN-----FRNIYVLHELDIPGAKRILALDQFKGKQGEKHFQELIGCGSDYSLAEALWV 148
Query: 105 -GETYKG------KKHLCLITDALCPLKDPDVGTKEDQVSTIARQMVAFG--LRMKNIVV 155
+ G K + L T+ P D TK + T A + G L + N+
Sbjct: 149 CANLFSGVRLKMSHKRVMLFTNNDSP--HGDDSTKASRAKTKACDLRDTGIFLDLMNLKK 206
Query: 156 RASLSGEPHMRVIIE--NDNLLNIFSKKSSAKTLFVDSTTSLRGARKTRDISPVTIFRGD 213
R II D L + ++S D +R A++TR S + R
Sbjct: 207 PGGFDISLFYRDIITPGKDEDLGVHFEESGR---LEDLLRKVR-AKETRKRS---LARLK 259
Query: 214 LELSEKMKIKVWVYKKTGEE-KFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVV 272
L L + + + + +Y + + P ++ Y + +VK+ +VE S ++
Sbjct: 260 LRLGKDVALTISIYNMVQKAFRPPPIRLYRE--------TNEQVKIKTRTFNVETGSLLL 311
Query: 273 PPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAE 332
P + + + YG + + + E E +K E + L+GF + +H++++ E
Sbjct: 312 PSDTK-RAQTYGGRQIVMEKEETEELKRFDEPGLILIGFKPLFMLKQHHFLRPSLFVYPE 370
Query: 333 PG--NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSE----KINI-P 385
N T+ V+ L + + E +A+ R RQ V L P E ++ + P
Sbjct: 371 ESLVNGSTTLFVALLTKCL-EKGVLALCRYTPRQNSPPYFVA-LIPQEEELDVQRVQVTP 428
Query: 386 DSFYFNVLPFAEDVREFQF 404
F LP+A+D R+ F
Sbjct: 429 PGFQLVFLPYADDKRKVPF 447
>gi|241681420|ref|XP_002411604.1| ku P70 DNA helicase, putative [Ixodes scapularis]
gi|215504344|gb|EEC13838.1| ku P70 DNA helicase, putative [Ixodes scapularis]
Length = 575
Score = 39.3 bits (90), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 107/497 (21%), Positives = 193/497 (38%), Gaps = 86/497 (17%)
Query: 44 EVGVILFGTEETENELTKEVGGYEHVKVLQDIKVVDGHLVQSLKHLPQGTCAGDYMLIKK 103
+VGV+LFGTE+ N +++V V+Q ++ V +L+ L + KK
Sbjct: 53 KVGVVLFGTEKDSNP-----SRFKNVYVIQALECPGATTVLNLESLIKD---------KK 98
Query: 104 YGETYKGKKHLCLITDAL---------CPL-----------KDPDVGTKE--DQVSTIAR 141
E Y G ++CL DAL CP+ DP G+ + + T A+
Sbjct: 99 SREQY-GHGNVCL-ADALWTCALMFSQCPVGHRRLLVLTNQDDPHAGSAQLDQRARTKAK 156
Query: 142 QMVAFGLRMKNIVVRASLSGEPHMRVIIEN----DNLLNIFSKKSSAKTLFVDSTTSLRG 197
+ G+ + + ++ G +++ ++ D + ++S K + L+
Sbjct: 157 DLHQSGVEVDLVHLQPPGGGAFRPKLLYQDLVSKDEVYGDEFPEASDKLEELLQRVRLKD 216
Query: 198 ARKTRDISPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVK 257
+K R S L+LS + ++ + + FP ++ D T+E
Sbjct: 217 HKKRRLASLPFCLGPGLQLS----LSLYNLVRPTGKPFP-VRLAKD---------TNEEL 262
Query: 258 VDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI 317
+ +D +V+ P K YG + +E + +K ++LLGF +
Sbjct: 263 LSRRLTYAQDNGEVLMPGDIAKCQEYGGKKALFDLSELKQMKAMAPPGLQLLGFKPLERL 322
Query: 318 LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVW-RQGQQSVVVGVLTP 376
++++ + + G R + + A +KVA V C W +G Q+ + L
Sbjct: 323 RAQHHVRPSHFVYPDEGTIRGSTRLFAALLQSCLRHKVAPV-CYWVSRGAQAPKLVYLLA 381
Query: 377 NVSEKIN-----IPDSFYFNVLPFAEDVREFQFPSF--SKFPVSWQPNEQQQEAADNLVK 429
E+ + +P F+ LPF++D R Q S P S A LV+
Sbjct: 382 QEEERDSHGLQQMPPGFHVVQLPFSDDRRRLQGLDCRSSSAPRSL------VSLASKLVQ 435
Query: 430 MLDLAPSGKGEILQPELTPNPALERFYHHLELKSEHQDAAPPPLD------DSLKKITEP 483
L P+ NP L+RF+ LE + +D +D D +K+ E
Sbjct: 436 QLRFP-------YHPDNFENPELQRFWRCLEALALDRDVVETSVDYTRPNHDKMKQKAEK 488
Query: 484 DPTLLAESQSAIDAFCG 500
D L A +++A C
Sbjct: 489 D--LEAFTKAAFPDGCA 503
>gi|54020912|ref|NP_001005700.1| X-ray repair complementing defective repair in Chinese hamster
cells 6 [Xenopus (Silurana) tropicalis]
gi|49523218|gb|AAH75271.1| thyroid autoantigen 70kDa (Ku antigen) [Xenopus (Silurana)
tropicalis]
Length = 611
Score = 39.3 bits (90), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 77/194 (39%), Gaps = 22/194 (11%)
Query: 274 PEQRIKGYRYGPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIAEP 333
P + YG + + + E E +K E S+ L+GF + + +H++ + E
Sbjct: 311 PSDTKRSQTYGNRQIVLEKDETEQLKRFDEPSLVLIGFKPITFLKKHHFTRPAQFIYPEE 370
Query: 334 G--NSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSE--KINI---PD 386
N T+ + L R + + +AI R R+ V L P E NI P
Sbjct: 371 SLINGSTTLFHALLLRCLAQ-QVMAICRYTPRRNTPPRFVA-LVPQDEELDDQNIQSKPP 428
Query: 387 SFYFNVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPEL 446
F LPFA+D+R+ P NE+Q + +V L + +
Sbjct: 429 GFNLVFLPFADDIRKIDPPE------KITANEEQVDKMKEIVHKLRFN-------FRSDS 475
Query: 447 TPNPALERFYHHLE 460
NP L++ + +LE
Sbjct: 476 FENPVLQQHFRNLE 489
>gi|384221927|ref|YP_005613093.1| hypothetical protein BJ6T_82610 [Bradyrhizobium japonicum USDA 6]
gi|354960826|dbj|BAL13505.1| conserved hypothetical protein [Bradyrhizobium japonicum USDA 6]
Length = 323
Score = 38.9 bits (89), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 71/163 (43%), Gaps = 25/163 (15%)
Query: 205 SPVTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKS 264
P ++G L LS + V +Y T E + + + + + K+ +KVD
Sbjct: 7 GPRANWKGFLRLS-LVTCPVALYPATSESEKISFNQLNRQTGHRIKY----IKVD----- 56
Query: 265 VEDPSKVVPPEQRIKGYRY-GPQVVPISSAEWEAVKFKPEKSVKLLGFTDASNI-----L 318
+D VP E +KGY Q + ++ E E + + +++++ F D S I +
Sbjct: 57 -QDTGDEVPNEDIVKGYELEKGQFIEVTKEELEEIALESTRTIEIDEFVDKSEIDPCYLI 115
Query: 319 RHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCV 361
R YY++ P A + + ++EMNKVAI R V
Sbjct: 116 RPYYLR--------PDGKVGHDAFAVIRETIREMNKVAIGRVV 150
>gi|376259763|ref|YP_005146483.1| Ku protein [Clostridium sp. BNL1100]
gi|373943757|gb|AEY64678.1| Ku protein [Clostridium sp. BNL1100]
Length = 311
Score = 38.9 bits (89), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 53/106 (50%), Gaps = 5/106 (4%)
Query: 269 SKVVPPEQRIKGYRYGP-QVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVN 327
+K V PE ++G+ Y P + V ++ ++E+++ K EK+V+++ F + Y+ K
Sbjct: 52 NKEVQPEDIVRGFEYEPGKYVIMNGEDFESLQVKSEKTVEIVDFVKLEEVDPVYFDKTYF 111
Query: 328 LFIAEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGV 373
L E G A + L A+ + K+A+ + R + V+ V
Sbjct: 112 LAPQETGGK----AYTLLREALGQKEKIAVAKITIRDRESLAVIRV 153
>gi|412994086|emb|CCO14597.1| predicted protein [Bathycoccus prasinos]
Length = 832
Score = 38.9 bits (89), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 95/248 (38%), Gaps = 27/248 (10%)
Query: 240 KYSDKAPSTDKFATHEVKVDYEYKSVEDPSK----VVPPEQRIKGYRYGPQVVPISSAEW 295
KY D D T V +D E V P K + P +Q++ Q +S +
Sbjct: 446 KYVDAEDHQD-LRTETVYLDKESGEVVAPKKSYLEIGPEKQKVIVKNAEKQATYAASKNF 504
Query: 296 EAVKFKPEKSVKLLGFTDASNIL-RHYYMKDVNLFI-AEPGNSRATVAVSALARAMKEMN 353
A K + LGF D S + R +K F+ A+ A SAL A E +
Sbjct: 505 HANACKL--GMHCLGFVDTSEVTQRDRLLKGQGKFVRADETVFGGKEAFSALLTACAERH 562
Query: 354 KVAIVRCVWRQGQQSVVVGVLTPNVSEK--INIPDSFYFNVLPFAEDVREFQFPSFSKFP 411
+ V+ Q V L P V + +P F+ +PF +D+R+ + + K
Sbjct: 563 VSMLCADVYNAKSQVKYV-ALIPQVENDAYLGVPAGFHVVKVPFRDDLRQPE-KAIGKSA 620
Query: 412 VSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNPALERFYHHLE--------LKS 463
E Q +AA+ LV+ L+L P NP L+ Y LE ++
Sbjct: 621 PQTSATETQIQAAEALVESLELQE------YHPTRISNPELQAHYKALEAIALNKRKVEK 674
Query: 464 EHQDAAPP 471
D APP
Sbjct: 675 ISDDTAPP 682
>gi|261328689|emb|CBH11667.1| KU80 protein, putative [Trypanosoma brucei gambiense DAL972]
Length = 634
Score = 38.9 bits (89), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 64/306 (20%), Positives = 121/306 (39%), Gaps = 34/306 (11%)
Query: 166 RVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGA-----RKTRDISPVTIFR-GDLELSEK 219
RV ++N+ +L K + + +L A RK R ++ T+F G++ L+
Sbjct: 190 RVKVDNETVLYTLCKALGNDSRVITLRDALVSAAQLVCRKVRSLAQKTVFTIGEVRLATN 249
Query: 220 MKIKVW-VYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRI 278
+ KV ++ PT ++ P + K A H D E +E E
Sbjct: 250 VLGKVRRMHVPANRTPAPT-----ERVPGSRK-AAHSQLFDEETLRLEGGE-----EDSQ 298
Query: 279 KGYRYGPQVVPISSAE---WEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIA---- 331
K P P +S+ EA K + + + + + + H + D + IA
Sbjct: 299 KTCLETPVNKPTASSSNRLSEATKIRGSRGIDAVACIPQNQVPVHVLVVDTSYMIAPLDD 358
Query: 332 EPGNSRATVAVSALARAMKEMNKVAIVRCVWRQ-GQQSVVVGVLTPNVSEKINIPDSFYF 390
+P +RA ++ +A+ + +VR V G ++ + V E D +
Sbjct: 359 DPVGTRA---FRSIVKALAAQDSALVVRYVRSTDGNPNMFLCVPLTTGDE-----DVLFM 410
Query: 391 NVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNP 450
+ LPF E++R +FP+ + + E + LV + + E+L P NP
Sbjct: 411 SRLPFMEEIRCLRFPTLQEMEMECDIPEADAQREQELVSSIVEEMTVGEEVLHPHRVLNP 470
Query: 451 ALERFY 456
++++Y
Sbjct: 471 FVQQYY 476
>gi|449669934|ref|XP_004207154.1| PREDICTED: X-ray repair cross-complementing protein 5-like [Hydra
magnipapillata]
Length = 178
Score = 38.9 bits (89), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 207 VTIFRGDLELSEKMKIKVWVYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSV- 265
VT FRG +E+ +KI + + KT EEK + KK S A S T EV + Y +
Sbjct: 104 VTAFRGPIEIGASLKINCYAFVKTSEEKPFSWKKLSAVAESELNCHTMEVDMRRSYHRID 163
Query: 266 EDPSKV 271
ED ++V
Sbjct: 164 EDQTQV 169
>gi|16116698|emb|CAC86188.1| KU80 protein [Trypanosoma brucei]
Length = 634
Score = 38.9 bits (89), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 64/306 (20%), Positives = 121/306 (39%), Gaps = 34/306 (11%)
Query: 166 RVIIENDNLLNIFSKKSSAKTLFVDSTTSLRGA-----RKTRDISPVTIFR-GDLELSEK 219
RV ++N+ +L K + + +L A RK R ++ T+F G++ L+
Sbjct: 190 RVKVDNETVLYTLCKALGNDSRVITLRDALVSAAQLVCRKVRSLAQKTVFTIGEVRLATN 249
Query: 220 MKIKVW-VYKKTGEEKFPTLKKYSDKAPSTDKFATHEVKVDYEYKSVEDPSKVVPPEQRI 278
+ KV ++ PT ++ P + K A H D E +E E
Sbjct: 250 VLGKVRRMHVPANRTPAPT-----ERVPGSRK-AAHSQLFDEETLRLEGGE-----EDSQ 298
Query: 279 KGYRYGPQVVPISSAE---WEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFIA---- 331
K P P +S+ EA K + + + + + + H + D + IA
Sbjct: 299 KTCLETPVNKPTASSSNRLSEATKIRGSRGIDAVACIPQNQVPVHVLVVDTSYMIAPLDD 358
Query: 332 EPGNSRATVAVSALARAMKEMNKVAIVRCVWRQ-GQQSVVVGVLTPNVSEKINIPDSFYF 390
+P +RA ++ +A+ + +VR V G ++ + V E D +
Sbjct: 359 DPVGTRA---FRSIVKALAAQDSALVVRYVRSTDGNPNMFLCVPLTTGDE-----DVLFM 410
Query: 391 NVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNP 450
+ LPF E++R +FP+ + + E + LV + + E+L P NP
Sbjct: 411 SRLPFMEEIRCLRFPTLQEMEMECDIPEADAQREQELVSSIVEEMTVGEEVLHPHRVLNP 470
Query: 451 ALERFY 456
++++Y
Sbjct: 471 FVQQYY 476
>gi|392961884|ref|ZP_10327337.1| DNA repair protein [Pelosinus fermentans DSM 17108]
gi|421055796|ref|ZP_15518758.1| Ku protein [Pelosinus fermentans B4]
gi|421058569|ref|ZP_15521248.1| DNA repair protein [Pelosinus fermentans B3]
gi|421064845|ref|ZP_15526675.1| DNA repair protein [Pelosinus fermentans A12]
gi|421072417|ref|ZP_15533527.1| DNA repair protein [Pelosinus fermentans A11]
gi|392439561|gb|EIW17272.1| Ku protein [Pelosinus fermentans B4]
gi|392445922|gb|EIW23229.1| DNA repair protein [Pelosinus fermentans A11]
gi|392453217|gb|EIW30105.1| DNA repair protein [Pelosinus fermentans DSM 17108]
gi|392460242|gb|EIW36567.1| DNA repair protein [Pelosinus fermentans A12]
gi|392460525|gb|EIW36816.1| DNA repair protein [Pelosinus fermentans B3]
Length = 272
Score = 38.9 bits (89), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 96/228 (42%), Gaps = 27/228 (11%)
Query: 272 VPPEQRIKGYRYGP-QVVPISSAEWEAVKFKPEKSVKLLGFTDASNILRHYYMKDVNLFI 330
VP E+ +KG+ P Q V +S E E V K + +++ F D I Y+ L
Sbjct: 56 VPKEEIVKGFEVSPEQYVILSPEEMENVYPKSSRRIEIADFVDLEQIDPIYFEHSYYL-T 114
Query: 331 AEPGNSRATVAVSALARAMKEMNKVAIVRCVWRQGQQSVVVGVLTPNVSEKINIPDSFYF 390
+ G + A S L AMK+ K AI V R Q + + P + I + F+
Sbjct: 115 PDKGMEK---AYSLLLIAMKKSQKTAIASFVLRNKQ---YIAAIRP-TNNVITLSTMFFS 167
Query: 391 NVLPFAEDVREFQFPSFSKFPVSWQPNEQQQEAADNLVKMLDLAPSGKGEILQPELTPNP 450
+ + E++ + P+ QPNE++ A L++ L + PE N
Sbjct: 168 DEIISQENLED--LPT-----EEHQPNERELSIALQLIESLSSS-------FTPEKYHNE 213
Query: 451 ALERFYHHLELKSEHQDAAPPPLDDSLKKITEPDPTLLAESQSAIDAF 498
E+ +E K+E Q P+ + K+ + L+A ++++ A
Sbjct: 214 YREKLLSMIESKAEGQVITQQPIIEQGGKVVD----LMAALEASLSAL 257
>gi|27376699|ref|NP_768228.1| hypothetical protein blr1588 [Bradyrhizobium japonicum USDA 110]
gi|27349840|dbj|BAC46853.1| conserved hypothetical protein [Bradyrhizobium japonicum USDA 110]
Length = 323
Score = 38.9 bits (89), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 20/112 (17%)
Query: 256 VKVDYEYKSVEDPSKVVPPEQRIKGYRY-GPQVVPISSAEWEAVKFKPEKSVKLLGFTDA 314
+KVD +D VP E +KGY Q + ++ E E + + +++++ F D
Sbjct: 53 IKVD------QDTGDEVPNEDIVKGYELEKGQFIEVTKEELEEIALESTRTIEIDEFVDK 106
Query: 315 SNI-----LRHYYMKDVNLFIAEPGNSRATVAVSALARAMKEMNKVAIVRCV 361
S I +R YY++ P A + + ++EMNKVAI R V
Sbjct: 107 SEIDPRYLIRPYYLR--------PDGKVGHDAFAVIRETIREMNKVAIGRVV 150
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.133 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,626,506,632
Number of Sequences: 23463169
Number of extensions: 454560610
Number of successful extensions: 1152124
Number of sequences better than 100.0: 813
Number of HSP's better than 100.0 without gapping: 279
Number of HSP's successfully gapped in prelim test: 534
Number of HSP's that attempted gapping in prelim test: 1149908
Number of HSP's gapped (non-prelim): 1256
length of query: 682
length of database: 8,064,228,071
effective HSP length: 150
effective length of query: 532
effective length of database: 8,839,720,017
effective search space: 4702731049044
effective search space used: 4702731049044
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 81 (35.8 bits)