BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005698
(682 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255554000|ref|XP_002518040.1| conserved hypothetical protein [Ricinus communis]
gi|223542636|gb|EEF44173.1| conserved hypothetical protein [Ricinus communis]
Length = 946
Score = 457 bits (1175), Expect = e-125, Method: Compositional matrix adjust.
Identities = 379/559 (67%), Positives = 438/559 (78%), Gaps = 35/559 (6%)
Query: 1 MTALAATTTMGTLSQVPMAPSAAAMAAAQAIVAAQALQAHAAQVQAQQSA-KDLSGSPDK 59
MTALAATT+MGTLSQVPMAPSAAAMAAAQAIVAAQALQAHAAQVQAQ + KD SGSPDK
Sbjct: 282 MTALAATTSMGTLSQVPMAPSAAAMAAAQAIVAAQALQAHAAQVQAQAQSAKDSSGSPDK 341
Query: 60 AGKADALKKTLQVSNLSPLLTVEQLRQLFSFCGTVVECTITDSKHFAYIEYSKPEEATAA 119
AGK D LKKTLQVSNLSPLLTV+QL+QLFS+ G+VVEC+ITDSKHFAYIEYSKPEEATAA
Sbjct: 342 AGKEDTLKKTLQVSNLSPLLTVDQLKQLFSYFGSVVECSITDSKHFAYIEYSKPEEATAA 401
Query: 120 LALNNMDVGGRPLNVEMAKSFPQKPSHLNSSLAGSSLPMMMQQAVAMQQMQFQQALLMQQ 179
LALNNMDVGGRPLNVEMAKS PQK S LNSS+A SSLP+MMQQAVAMQQMQFQQALLMQQ
Sbjct: 402 LALNNMDVGGRPLNVEMAKSLPQK-SLLNSSVASSSLPLMMQQAVAMQQMQFQQALLMQQ 460
Query: 180 TLTAQQAANRAASMKSATELAAARAAEISKKLKADGLVDEDKETKQKSRSPSTSRARSRS 239
T+TAQQAANRAA+MKSATELAAARAAEISKKLKADG VDE+KET++KSRSPS SR RS+S
Sbjct: 461 TMTAQQAANRAATMKSATELAAARAAEISKKLKADGFVDEEKETERKSRSPSASRVRSKS 520
Query: 240 KSRSPVHYQRTYRARSRSKSRSPVSFHRRRRSRSFSPPYRHRRGHRSRSPLRSRHYSKYD 299
KS+SPV Y+R R+ SR R HRSRSP RSRH S+YD
Sbjct: 521 KSKSPVSYRRRRRSPYSPPSRR-------------------HRDHRSRSPFRSRHLSRYD 561
Query: 300 NERLSTRDTRDGADRSRR-ESDISHHSPVPRRRKSRSVSPHSRKSYRSDSGSPKHRQESS 358
ER S RD+RD + R+RR + SPV RR +SRSVSP ++SYR+DSGSPK R+ESS
Sbjct: 562 IERRSFRDSRDDSGRTRRGDRSFDRRSPVSRRNRSRSVSPRMKRSYRADSGSPKRRRESS 621
Query: 359 ---ARKSSRAHSKSPKRHRGNRNSPRND-DAKPKYRHRSRSKSMERHDEEKDEARDGKSQ 414
ARKSS S+SP+ HRG+R+SPRND D K KYR RSRSKS+E E+ EA+D K +
Sbjct: 622 PRRARKSSHGGSRSPRHHRGSRSSPRNDSDNKLKYRKRSRSKSVEDSKEKAKEAQDEKFK 681
Query: 415 HRERKRSRSLSREDEHHGRGRSPAGNVDENKSKLRGRSRSVSALDKYKSSEIADDSRDDR 474
+ER RSRSLS E E + +S + ++DEN+ K RGRSRS S ++ +S+E +++RD R
Sbjct: 682 KQER-RSRSLSVE-EKNNVSKSSSRSIDENEPKHRGRSRSKS-VEARRSTEKVNETRDGR 738
Query: 475 LRNRHKRRSRSKSVEGK-----MGGGSRDKKPKHHDRRRSRSISADGKHHRGSR-SPRGL 528
L+NR ++RSRSKSVE + G SRDKK KH DR+RSRSISADGKHHRGSR SPR
Sbjct: 739 LKNRDRKRSRSKSVEVRRHSREKGNESRDKKSKHRDRKRSRSISADGKHHRGSRSSPRVA 798
Query: 529 DESRTKLGRRSRSKSIERK 547
D+ ++K R SRS+S E K
Sbjct: 799 DDIKSKHRRHSRSRSPESK 817
>gi|224128984|ref|XP_002328861.1| predicted protein [Populus trichocarpa]
gi|222839291|gb|EEE77628.1| predicted protein [Populus trichocarpa]
Length = 950
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 405/694 (58%), Positives = 480/694 (69%), Gaps = 74/694 (10%)
Query: 1 MTALAATTTMGTLSQVPMAPSAAAMAAAQAIVAAQALQAHAAQVQAQ-QSAKDLSGSPDK 59
MT LA TT+MGTLSQVPMAPSAAAMAAAQAIVAA+ALQAHAAQ+QAQ +SAKD SGSPDK
Sbjct: 281 MTLLAPTTSMGTLSQVPMAPSAAAMAAAQAIVAAKALQAHAAQLQAQARSAKDSSGSPDK 340
Query: 60 AGKADALKKTLQVSNLSPLLTVEQLRQLFSFCGTVVECTITDSKHFAYIEYSKPEEATAA 119
A K DALKKTL VSNLSPLLTVEQL+QLFSFCGTVVECTI DSKH AYIEYSKPEEATAA
Sbjct: 341 ARKEDALKKTLHVSNLSPLLTVEQLKQLFSFCGTVVECTIADSKHSAYIEYSKPEEATAA 400
Query: 120 LALNNMDVGGRPLNVEMAKSFPQKPSHLNSSLAGSSLPMMMQQAVAMQQMQFQQALLMQQ 179
LALNNMDVGGRPLNVE AKS PQKP LNSS A SSLPMMMQQAVAMQQMQFQQALLMQQ
Sbjct: 401 LALNNMDVGGRPLNVETAKSLPQKPI-LNSSFASSSLPMMMQQAVAMQQMQFQQALLMQQ 459
Query: 180 TLTAQQAANRAASMKSATELAAARAAEISKKLKADGLVDEDKETKQKSRSPSTSRARSRS 239
T+TAQQAAN+AA+MKSATELAAARAAEISKKLK DGLV + ETK +S+SP RARSRS
Sbjct: 460 TMTAQQAANKAATMKSATELAAARAAEISKKLKDDGLVTGEGETKAESKSPPPPRARSRS 519
Query: 240 KSRSPVHYQRTYRARSRSKSRSPVSFHRRRRSRSFSPPYRHRRGHRSRSPLRSRHYSKYD 299
KSRSP++Y+ RR RS S+SPP RH R RSRSP+R R++S+Y+
Sbjct: 520 KSRSPINYR------------------RRMRSPSYSPPSRHNRDRRSRSPVRFRYHSRYN 561
Query: 300 NERLSTRDTRDGA----------DRSRRESDISHHSPVPRRRKSRSVSPHSRKSYRSDSG 349
ER S RD DRSR HHSPV RR +SRS SP +RKSYR+DSG
Sbjct: 562 YERRSYRDRDSRDDGDRTRRRELDRSR-----DHHSPVSRRNRSRSASPRTRKSYRADSG 616
Query: 350 SPKHRQESSA---RKSSRAHSKSPKRHRGNRNSPRND---DAKPKYRHRSRSKSMERHDE 403
SPKHRQESSA RK+S + S+SP+ H G+R+SPRN+ + + R RSRSKS+E ++
Sbjct: 617 SPKHRQESSAHRSRKASDSGSRSPRHHGGSRSSPRNNPDSKLRYRRRSRSRSKSVEEAND 676
Query: 404 EKDEARDGKSQHRERKRSRSLSREDEHHGRGRSPAGNVDENKSKLRGRSRSVSALDKYKS 463
+ DE R+ KS+ ER RSRSLS E +HHGR SP + +E+ SK R RSRS S K S
Sbjct: 677 KVDEIREKKSKQHER-RSRSLSVELKHHGRRPSPRSS-NEDDSKHRSRSRSKSVEVKRHS 734
Query: 464 SEIADDSRDDRLRNRHKRRSRSKSVEGKM-----GGGSRDKKPKHHDRRRSRSISADGKH 518
+E D + D +L++RH RRSRSKSV+ + G +RDKK KH DR RSRSI+A+GKH
Sbjct: 735 NEKVDKTGDGKLKHRH-RRSRSKSVDDRHHYKERGNETRDKKTKHQDRGRSRSITAEGKH 793
Query: 519 HRGSRSPRGLDESRTKLGRRSRSKSIERK---------------LYRNRGRSRSADGRRR 563
HR SPRG D S++K R SRS S E K +R+R RS SA+G+
Sbjct: 794 HRSRSSPRGRDGSKSKHRRHSRSISPEGKRRSSHRVDQNKDEKSKHRHRRRSPSAEGKHG 853
Query: 564 KSMLSPANLDRSESNRRRHSASQS---KDHANSESAETRDYKSMHHPHNWDKTEGELNAS 620
+ SP + + ++S RR S+S K H+N E R HH H DKTE +A+
Sbjct: 854 R---SPRSSEENKSKHRRRPRSKSAERKRHSNDEKDIRRGENETHHEHGSDKTE---DAN 907
Query: 621 LKDPTVMEDDGFLSSKQKNYDLKKSMENVSAHEN 654
+ M ++ + K K D K+ +E++ N
Sbjct: 908 EEKKYFMNEE-MVDLKHKGCDSKELVEDMVTGSN 940
>gi|224060343|ref|XP_002300152.1| predicted protein [Populus trichocarpa]
gi|222847410|gb|EEE84957.1| predicted protein [Populus trichocarpa]
Length = 892
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 392/644 (60%), Positives = 455/644 (70%), Gaps = 56/644 (8%)
Query: 1 MTALAATTTMGTLSQVPMAPSAAAMAAAQAIVAAQALQAHAAQVQAQQSA-KDLSGSPDK 59
MT LA TTTMGTLS PMAPSAAAMAAAQAIVAA+ALQAHAAQVQAQ + KD SGSPDK
Sbjct: 255 MTLLAPTTTMGTLSHAPMAPSAAAMAAAQAIVAAKALQAHAAQVQAQAQSAKDSSGSPDK 314
Query: 60 AGKADALKKTLQVSNLSPLLTVEQLRQLFSFCGTVVECTITDSKHFAYIEYSKPEEATAA 119
A K DALKKTL VSNLSPLLTVEQL+QLFSFCGTVVEC I DSKH AYIEYSKPEEATAA
Sbjct: 315 ARKEDALKKTLHVSNLSPLLTVEQLKQLFSFCGTVVECAIADSKHSAYIEYSKPEEATAA 374
Query: 120 LALNNMDVGGRPLNVEMAKSFPQKPSHLNSSLAGSSLPMMMQQAVAMQQMQFQQALLMQQ 179
LALNNMDVGGRPLNVEMAKS PQKP +S + SSLPMMMQQAVAMQQMQFQQAL+MQQ
Sbjct: 375 LALNNMDVGGRPLNVEMAKSLPQKPLLNSSLAS-SSLPMMMQQAVAMQQMQFQQALIMQQ 433
Query: 180 TLTAQQAANRAASMKSATELAAARAAEISKKLKADGLVDEDKETKQKSRSPSTSRARSRS 239
T+TAQQAAN+AASMKSATELAAARAAEISKKLKADG V ++ETK +++SPS +ARSRS
Sbjct: 434 TMTAQQAANKAASMKSATELAAARAAEISKKLKADGFVIGEEETKAETKSPSPPQARSRS 493
Query: 240 KSRSPVHYQRTYRARSRSKSRSPVSFHRRRRSRSFSPPYRHRRGHRSRSPLRSRHYSKYD 299
KSRSP++YQ RR RS S+SPP R R RSRSP R R++S+Y+
Sbjct: 494 KSRSPINYQ------------------RRLRSPSYSPPSRRNRDRRSRSPFRFRYHSRYN 535
Query: 300 NERLSTRDTRDGADRSR-RESDIS--HHSPVPRRRKSRSVSPHSRKSYRSDSGSPKHRQE 356
R S RD+RD DR R ++SD S HSPV RR +SRS SP +RKSYR DSGSPK R E
Sbjct: 536 YGRRSYRDSRDIVDRMRMQDSDRSRGRHSPVSRRSRSRSASPRTRKSYRDDSGSPKRRLE 595
Query: 357 SSA---RKSSRAHSKSPKRHRGNRNSPRN-DDAKPKY-RH-RSRSKSMERHDEEKDEARD 410
SSA RK++ + S+SP+ H G R S RN D+K +Y RH RSRSKS+E ++ +E +D
Sbjct: 596 SSAQRSRKAADSGSRSPRSHGGRRLSRRNITDSKLRYKRHSRSRSKSVEESNDRVNEIQD 655
Query: 411 GKSQHRERKRSRSLSREDEHHGRGRSPAGNVDENKSKLRGRSRSVSALDKYKSSEIADDS 470
KS+ ER RSRSLS E +HHGR R + DE++S R RSRS S K S E +
Sbjct: 656 KKSKQHER-RSRSLSVELKHHGR-RPSHRSSDEDESNHRSRSRSKSVEVKRHSYEKVGKT 713
Query: 471 RDDRLRNRHKRRSRSKSVEGKM-----GGGSRDKKPKHHDRRRSRSISADGKHHRGSR-S 524
D RL++R RRSRSKSV+ + G SRDKK KH DR +SRSISA+ HHR SR S
Sbjct: 714 EDGRLKHR-DRRSRSKSVDDRHCYKERGNESRDKKTKHRDRVQSRSISAESNHHRRSRSS 772
Query: 525 PRGLDESRTKLGRRSRSKSIERKLYRN-----------RGRSRSADGRRRKSMLSPANLD 573
P+G DES++K R SR S E K N R RS SA+G K + SP + +
Sbjct: 773 PKGRDESKSKHRRHSRPISPEGKRRSNHRIDEKSKHCSRRRSVSAEG---KHIRSPRSSE 829
Query: 574 RSESNRRRHSASQS---KDHANSESAETRDYKSMHHPHNWDKTE 614
++S RRRHS S+S K H+N E + R+ H H DKTE
Sbjct: 830 ENKSKRRRHSRSKSAEHKRHSNDEEIK-REENETRHEHTSDKTE 872
>gi|225466283|ref|XP_002270255.1| PREDICTED: uncharacterized protein LOC100244513 [Vitis vinifera]
Length = 926
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 344/537 (64%), Positives = 396/537 (73%), Gaps = 43/537 (8%)
Query: 1 MTALAATTTMGTLSQVPMAPSAAAMAAAQAIVAAQALQAHAAQVQAQQSA-KDLSGSPDK 59
MTALAATTTMGTLSQVPMAPSAAAMAAAQAIVAAQALQAHAAQVQAQ + KD +GSPDK
Sbjct: 275 MTALAATTTMGTLSQVPMAPSAAAMAAAQAIVAAQALQAHAAQVQAQAQSAKDSAGSPDK 334
Query: 60 AGKADALKKTLQVSNLSPLLTVEQLRQLFSFCGTVVECTITDSKHFAYIEYSKPEEATAA 119
GKADALKKTLQVSNLSPLLTVEQL+QLFSFCGTVVEC+ITDSKHFAYIEYSKPEEATAA
Sbjct: 335 VGKADALKKTLQVSNLSPLLTVEQLKQLFSFCGTVVECSITDSKHFAYIEYSKPEEATAA 394
Query: 120 LALNNMDVGGRPLNVEMAKSFPQKPSHLNSSLAGSSLPMMMQQAVAMQQMQFQQALLMQQ 179
LALNNMDVGGRPLNVEMAKS P KP+ LNS LA SLPM+MQQAVAMQQMQFQQALLMQQ
Sbjct: 395 LALNNMDVGGRPLNVEMAKSLPPKPAILNSPLASPSLPMVMQQAVAMQQMQFQQALLMQQ 454
Query: 180 TLTAQQAANRAASMKSATELAAARAAEISKKLKADGLV---DEDKETKQKSRSPSTSRAR 236
T+TAQQAANRAA+MKSATELA+ARAAEISKKLKADG V E+KE +KSRSPS S AR
Sbjct: 455 TMTAQQAANRAATMKSATELASARAAEISKKLKADGFVEEEKEEKEENRKSRSPSISHAR 514
Query: 237 SRSKSRSPVHYQRTYRARSRSKSRSPVSFHRRRRSRSFSPPYRHRRGHRSRSPLRSRHYS 296
S+S+S+SP+HY+R R+RS S + R HRSRSP RS HYS
Sbjct: 515 SKSRSKSPLHYRRRRRSRSFSPPSR------------------YSREHRSRSPFRSHHYS 556
Query: 297 KYDNERLSTRDTRDGADRSRRESDIS---HHSPVPRRRKSRSVSPHSRKSYRSDSGSPKH 353
+D+ S RD +DG+DRSRR HH RR +SRS SP +RKSYR+DS SPK
Sbjct: 557 IHDHGSRSYRDNKDGSDRSRRRDLDRSHDHHLSSSRRNRSRSRSPRTRKSYRADSESPKR 616
Query: 354 RQESSA---RKSSRAHSKSPKRHRGNRNSPRNDD----AKPKYRHRSRSKSMERHDEEKD 406
R ESS+ RKSSR KSP+ HRG+R+SPRNDD + + + +E+ D
Sbjct: 617 RVESSSHRTRKSSRVSPKSPRHHRGSRSSPRNDDDNKSKRRRRSRSKSVEGKHYSNEKID 676
Query: 407 EARDGKSQHRERKRSRSLSREDEHH-GRGRSPAGNVDENKSKLRGRSRSVSALDKYKSSE 465
E RD KS+HR+R+RSRS+S E +HH G G SP + D++KSK R RSRS SA K S+
Sbjct: 677 ERRDKKSKHRDRRRSRSISAEGKHHKGSGFSPR-SFDDSKSKHRKRSRSKSAEGKRVLSD 735
Query: 466 IADDSRDDRLRNRHKRRSRSKSVEGKMG-------GGSRDKKPKHHDRRRSRSISAD 515
D+ RD++ ++ KRRSRS+S EGK S + +PKH RR SRS SA+
Sbjct: 736 KTDEGRDEKGKHHEKRRSRSRSAEGKYCRLNRLSPKSSDEIRPKH--RRHSRSRSAE 790
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 96/245 (39%), Positives = 122/245 (49%), Gaps = 50/245 (20%)
Query: 400 RHDEEKDEARDGKSQHRERKRSRSLSREDEHHGRGRSPAGNVDENKSKLRGRSRSVSALD 459
R D E + R S HR RK SR + HH RS N D+NKSK R RSRS S
Sbjct: 608 RADSESPKRRVESSSHRTRKSSRVSPKSPRHHRGSRSSPRNDDDNKSKRRRRSRSKSVEG 667
Query: 460 KYKSSEIADDSRDDRLRNRHKRRSRSKSVEGKMGGGSRDKKPKHHDRRRSRSISADGKHH 519
K+ S+E D+ RD KK KH DRRRSRSISA+GKHH
Sbjct: 668 KHYSNEKIDERRD--------------------------KKSKHRDRRRSRSISAEGKHH 701
Query: 520 RGS-RSPRGLDESRTKLGRRSRSKSIERKLY-----------------RNRGRSRSADGR 561
+GS SPR D+S++K +RSRSKS E K + R RSRSA+G+
Sbjct: 702 KGSGFSPRSFDDSKSKHRKRSRSKSAEGKRVLSDKTDEGRDEKGKHHEKRRSRSRSAEGK 761
Query: 562 R-RKSMLSPANLDRSESNRRRHSASQSKDHANSESAETRDYKSMHHPHNWDKTEGELNAS 620
R + LSP + D RRHS S+S ++ S++ D K MHH + E E+
Sbjct: 762 YCRLNRLSPKSSDEIRPKHRRHSRSRSAEYRRSDNKG--DEKLMHHK---EPKEREVTED 816
Query: 621 LKDPT 625
LK+P+
Sbjct: 817 LKEPS 821
>gi|296088276|emb|CBI36502.3| unnamed protein product [Vitis vinifera]
Length = 888
Score = 374 bits (960), Expect = e-100, Method: Compositional matrix adjust.
Identities = 326/556 (58%), Positives = 374/556 (67%), Gaps = 89/556 (16%)
Query: 1 MTALAATTTMGTLSQVPMAPSAAAMAAAQAIVAAQALQAHAAQVQAQQSA-KDLSGSPDK 59
MTALAATTTMGTLSQVPMAPSAAAMAAAQAIVAAQALQAHAAQVQAQ + KD +GSPDK
Sbjct: 275 MTALAATTTMGTLSQVPMAPSAAAMAAAQAIVAAQALQAHAAQVQAQAQSAKDSAGSPDK 334
Query: 60 AGKADALKKTLQVSNLSPLLTVEQLRQLFSFCGTVVECTITDSKHFAYIEYSKPEEATAA 119
GKADALKKTLQVSNLSPLLTVEQL+QLFSFCGTVVEC+ITDSKHFAYIEYSKPEEATAA
Sbjct: 335 VGKADALKKTLQVSNLSPLLTVEQLKQLFSFCGTVVECSITDSKHFAYIEYSKPEEATAA 394
Query: 120 LALNNMDVGGRPLNVEMAKSFPQKPSHLNSSLAGSSLPMMMQQAVAMQQMQFQQALLMQQ 179
LALNNMDVGGRPLNVEMAKS P KP+ LNS LA SLPM+MQQAVAMQQMQFQQALLMQQ
Sbjct: 395 LALNNMDVGGRPLNVEMAKSLPPKPAILNSPLASPSLPMVMQQAVAMQQMQFQQALLMQQ 454
Query: 180 TLTAQQAANRAASMKSATELAAARAAEISKKLKADGLV---DEDKETKQKSRSPSTSRAR 236
T+TAQQAANRAA+MKSATELA+ARAAEISKKLKADG V E+KE +KSRSPS S AR
Sbjct: 455 TMTAQQAANRAATMKSATELASARAAEISKKLKADGFVEEEKEEKEENRKSRSPSISHAR 514
Query: 237 SRSKSRSPVHYQRTYRARSRSKSRSPVSFHRRRRSRSFSPPYRHRRGHRSRSPLRSRHYS 296
S+S+S+SP+HY+R R+RS S + R HRSRSP RS HYS
Sbjct: 515 SKSRSKSPLHYRRRRRSRSFSPPSR------------------YSREHRSRSPFRSHHYS 556
Query: 297 KYDNERLSTRDTRDGADRSRRESDIS---HHSPVPRRRKSRSVSPHSRKSYRSDSGSPKH 353
+D+ S RD +DG+DRSRR HH RR +SRS SP +RKSYR+DS SPK
Sbjct: 557 IHDHGSRSYRDNKDGSDRSRRRDLDRSHDHHLSSSRRNRSRSRSPRTRKSYRADSESPKR 616
Query: 354 RQESSA---RKSSRAHSK------------------------SPKRHRGNRNSPRN-DDA 385
R ESS+ RKSSR +S K H+G+ SPR+ DD+
Sbjct: 617 RVESSSHRTRKSSRHYSNEKIDERRDKKSKHRDRRRSRSISAEGKHHKGSGFSPRSFDDS 676
Query: 386 KPKYRHRSRSKSMERH---DEEKDEARDGKSQHRERKRSRSLSREDEHHGRGR-SPAGNV 441
K K+R RSRSKS E ++ DE RD K +H E++RSRS S E ++ R SP
Sbjct: 677 KSKHRKRSRSKSAEGKRVLSDKTDEGRDEKGKHHEKRRSRSRSAEGKYCRLNRLSP---- 732
Query: 442 DENKSKLRGRSRSVSALDKYKSSEIADDSRDDRLRNRHKRRSRSKSVEGKMGGGSRDKKP 501
KSS D +R +H+R SRS+S E + D+K
Sbjct: 733 --------------------KSS--------DEIRPKHRRHSRSRSAEYRRSDNKGDEKL 764
Query: 502 KHHDRRRSRSISADGK 517
HH + R ++ D K
Sbjct: 765 MHHKEPKEREVTEDLK 780
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/148 (43%), Positives = 85/148 (57%), Gaps = 24/148 (16%)
Query: 497 RDKKPKHHDRRRSRSISADGKHHRGS-RSPRGLDESRTKLGRRSRSKSIERKLY------ 549
RDKK KH DRRRSRSISA+GKHH+GS SPR D+S++K +RSRSKS E K
Sbjct: 641 RDKKSKHRDRRRSRSISAEGKHHKGSGFSPRSFDDSKSKHRKRSRSKSAEGKRVLSDKTD 700
Query: 550 -----------RNRGRSRSADGRR-RKSMLSPANLDRSESNRRRHSASQSKDHANSESAE 597
+ R RSRSA+G+ R + LSP + D RRHS S+S ++ S++
Sbjct: 701 EGRDEKGKHHEKRRSRSRSAEGKYCRLNRLSPKSSDEIRPKHRRHSRSRSAEYRRSDN-- 758
Query: 598 TRDYKSMHHPHNWDKTEGELNASLKDPT 625
D K MHH + E E+ LK+P+
Sbjct: 759 KGDEKLMHHK---EPKEREVTEDLKEPS 783
>gi|449433175|ref|XP_004134373.1| PREDICTED: uncharacterized protein LOC101203535 [Cucumis sativus]
Length = 936
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 367/635 (57%), Positives = 439/635 (69%), Gaps = 78/635 (12%)
Query: 1 MTALAATTTMGTLSQVPMAPSAAAMAAAQAIVAAQALQAHAAQVQAQQSAKDLSGSPDKA 60
MTA+AATT+MGT+SQVPMAPSAAAMAAAQAIVAAQALQAHAAQVQAQQ+ S
Sbjct: 268 MTAIAATTSMGTISQVPMAPSAAAMAAAQAIVAAQALQAHAAQVQAQQAQSAKDSSGSSD 327
Query: 61 GK---ADALKKTLQVSNLSPLLTVEQLRQLFSFCGTVVECTITDSKHFAYIEYSKPEEAT 117
ADALK+TLQVSNLSPLLTVEQL+QLFSFCGTVVECTITDSKHFAYIEYSKPEEAT
Sbjct: 328 KSGKAADALKRTLQVSNLSPLLTVEQLKQLFSFCGTVVECTITDSKHFAYIEYSKPEEAT 387
Query: 118 AALALNNMDVGGRPLNVEMAKSFPQKPSHLNSSLAGSSLPMMMQQAVAMQQMQFQQALLM 177
AALALNNMDVGGRPLNVEMAKS PQKP+ N SLA SSLPMMMQQAVAMQQMQFQQALLM
Sbjct: 388 AALALNNMDVGGRPLNVEMAKSLPQKPAAANPSLASSSLPMMMQQAVAMQQMQFQQALLM 447
Query: 178 QQTLTAQQAANRAASMKSATELAAARAAEISKKLKADGLVDEDKETKQKSRSPSTSRARS 237
QQT+TAQQAANRAA+MKSATELAAARAAEISKKLK DG+ +E+ ETK+KSRSPS R RS
Sbjct: 448 QQTMTAQQAANRAATMKSATELAAARAAEISKKLKVDGIGNEETETKEKSRSPSLPRERS 507
Query: 238 RSKSRSPVHYQRTYRARSRSKSRSPVSFHRRRRSRSFSPPYRHRRGHRSRSPLRSRHYSK 297
+SKS+SP+ Y+ RRRS ++SPPYRH R HRSRSP+RSRHYS+
Sbjct: 508 KSKSKSPIKYR------------------SRRRSPTYSPPYRHSRDHRSRSPVRSRHYSR 549
Query: 298 YDNER---LSTRDTRDGADRSRRESDISHHSPVPRRRKSRSVSPHSRKSYRSDSGSPKHR 354
Y+++R +R+ + + R + S SP+ R+ +SRS+SP RKSYR+ S SP H+
Sbjct: 550 YEDDRRGYRESREASERSRRRDLDRSRSRRSPISRKNRSRSISPRRRKSYRAGSDSPSHQ 609
Query: 355 QESS---ARKSSRAHSKSPKRHRG-NRNSPRNDDA-KPKYRHRSRSKSME-RH--DEEKD 406
+E S RKS + +SP RH G +R+SPR DD+ K K+R RSRSKS+E +H DE+ +
Sbjct: 610 RERSPQRGRKSDHSDLRSPIRHHGKSRSSPRKDDSDKLKHRRRSRSKSVETKHHSDEKIN 669
Query: 407 EARDGKSQHRERKRSRSLSREDEHHGRGRSPAGNVDENKSKLRGRSRSVS---ALDKYKS 463
E + GK ++RER+RSRS S ED+H R SP ++D+N SK R RSRS S DKY
Sbjct: 670 EMQHGKLKNRERRRSRSASLEDKHSKRRPSPR-SLDKNISKHRRRSRSNSREKVDDKYHG 728
Query: 464 SEI---------------ADDSRDDRLRNRHKRRSRSKSVEGK-----MGGGSRDKKPKH 503
D +R ++L+NR +RRSRSKSV+GK SRDK+ +H
Sbjct: 729 RRRSRSSSSDSKHLPDSKVDSTRYEKLKNRSRRRSRSKSVDGKHRRREKSDRSRDKRLRH 788
Query: 504 HDRRRSRSISADGKHHRGSR-SPRGLDESRTKLGRRSRSKSIERK--------------- 547
DRR SRSIS + H R +R SP DE+++K RR RS S E K
Sbjct: 789 RDRRSSRSISPEAGHQRVTRLSPTSSDETKSK--RRRRSLSPEDKPSDIDNGCIAENPKN 846
Query: 548 LYRNRGRSRSADGRRRKSMLSPANLDRSESNRRRH 582
L R + RS S G +S LSP+ +E N +H
Sbjct: 847 LGRQQSRSNSISGENGESNLSPS----TEENEFKH 877
>gi|449487626|ref|XP_004157720.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101203535
[Cucumis sativus]
Length = 936
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 365/635 (57%), Positives = 437/635 (68%), Gaps = 78/635 (12%)
Query: 1 MTALAATTTMGTLSQVPMAPSAAAMAAAQAIVAAQALQAHAAQVQAQQSAKDLSGSPDKA 60
MTA+AATT+MGT+SQVPMAPSAAAMAAAQAIVAAQALQAHAAQVQAQQ+ S
Sbjct: 268 MTAIAATTSMGTISQVPMAPSAAAMAAAQAIVAAQALQAHAAQVQAQQAQSAKDSSGSSD 327
Query: 61 GK---ADALKKTLQVSNLSPLLTVEQLRQLFSFCGTVVECTITDSKHFAYIEYSKPEEAT 117
ADALK+TLQVSNLSPLLTVEQL+QLF FCGTVVECTITDSKHFAYIEYSKPEEAT
Sbjct: 328 KSGKAADALKRTLQVSNLSPLLTVEQLKQLFXFCGTVVECTITDSKHFAYIEYSKPEEAT 387
Query: 118 AALALNNMDVGGRPLNVEMAKSFPQKPSHLNSSLAGSSLPMMMQQAVAMQQMQFQQALLM 177
AALALNNMDVGGRPLNVEMAKS PQKP+ N SLA SSLPMMMQQAVAMQQMQFQQALLM
Sbjct: 388 AALALNNMDVGGRPLNVEMAKSLPQKPAAANPSLASSSLPMMMQQAVAMQQMQFQQALLM 447
Query: 178 QQTLTAQQAANRAASMKSATELAAARAAEISKKLKADGLVDEDKETKQKSRSPSTSRARS 237
QQT+TAQQAANRAA+MKSATELAAARAAEIS KLK DG+ +E+ ETK+KSRSPS R RS
Sbjct: 448 QQTMTAQQAANRAATMKSATELAAARAAEISXKLKVDGIGNEETETKEKSRSPSLPRERS 507
Query: 238 RSKSRSPVHYQRTYRARSRSKSRSPVSFHRRRRSRSFSPPYRHRRGHRSRSPLRSRHYSK 297
+SKS+SP+ Y+ RRRS ++SPPYRH R HRSRSP+RSRHYS+
Sbjct: 508 KSKSKSPIKYR------------------SRRRSPTYSPPYRHSRDHRSRSPVRSRHYSR 549
Query: 298 YDNER---LSTRDTRDGADRSRRESDISHHSPVPRRRKSRSVSPHSRKSYRSDSGSPKHR 354
Y+++R +R+ + + R + S SP+ R+ +SRS+SP RKSYR+ S SP H+
Sbjct: 550 YEDDRRGYRESREASERSRRRDLDRSRSRRSPISRKNRSRSISPRRRKSYRAGSDSPSHQ 609
Query: 355 QESS---ARKSSRAHSKSPKRHRG-NRNSPRNDDA-KPKYRHRSRSKSME-RH--DEEKD 406
+E S RKS + +SP RH G +R+SPR DD+ K K+R RSRSKS+E +H DE+ +
Sbjct: 610 RERSPQRGRKSDHSDLRSPIRHHGKSRSSPRKDDSDKLKHRRRSRSKSVETKHHSDEKIN 669
Query: 407 EARDGKSQHRERKRSRSLSREDEHHGRGRSPAGNVDENKSKLRGRSRSVS---ALDKYKS 463
E + GK ++RER+RSRS S ED+H R SP ++D+N SK R RSRS S DKY
Sbjct: 670 EMQHGKLKNRERRRSRSASLEDKHSKRRPSPR-SLDKNISKHRRRSRSNSREKVDDKYHG 728
Query: 464 SEI---------------ADDSRDDRLRNRHKRRSRSKSVEGK-----MGGGSRDKKPKH 503
D +R ++L+NR +RRSRSKSV+GK SRDK+ +H
Sbjct: 729 RRRSRSSSSDSKHLPDSKVDSTRYEKLKNRSRRRSRSKSVDGKHRRREKSDRSRDKRLRH 788
Query: 504 HDRRRSRSISADGKHHRGSR-SPRGLDESRTKLGRRSRSKSIERK--------------- 547
DRR SRSIS + H R +R SP DE+++K RR RS S E K
Sbjct: 789 RDRRSSRSISPEAGHQRVTRLSPTSSDETKSK--RRRRSLSPEDKPSDIDNGCIAENPKN 846
Query: 548 LYRNRGRSRSADGRRRKSMLSPANLDRSESNRRRH 582
L R + RS S G +S LSP+ +E N +H
Sbjct: 847 LGRQQSRSNSISGENGESNLSPS----TEENEFKH 877
>gi|356525215|ref|XP_003531222.1| PREDICTED: uncharacterized protein LOC100790138 [Glycine max]
Length = 975
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 360/720 (50%), Positives = 439/720 (60%), Gaps = 89/720 (12%)
Query: 1 MTALAATTTMGTLSQVPMAPSAAAMAAAQAIVAAQALQAHAAQVQAQQSAKDLSGSPDKA 60
MTALAATT+MGTLSQ PMA +AA AA + A A QSAKD +GSP+KA
Sbjct: 279 MTALAATTSMGTLSQAPMA-PSAAAMAAAQAIVAAQALQAHAAQVQAQSAKDSTGSPEKA 337
Query: 61 GKADALKKTLQVSNLSPLLTVEQLRQLFSFCGTVVECTITDSKHFAYIEYSKPEEATAAL 120
K DALKKTLQVSNLSPLLTVEQL+QLF FCGTVVECTITDSKHFAYIEYSKPEEATAAL
Sbjct: 338 SKDDALKKTLQVSNLSPLLTVEQLKQLFGFCGTVVECTITDSKHFAYIEYSKPEEATAAL 397
Query: 121 ALNNMDVGGRPLNVEMAKSFPQKPSHLNSSLAGSSLPMMMQQAVAMQQMQFQQALLMQQT 180
ALNN+DVGGRPLNVEMAKS P KPS NSSLA SSLP+MMQQAVAMQQMQFQQALLMQQ+
Sbjct: 398 ALNNIDVGGRPLNVEMAKSLPPKPSVANSSLASSSLPLMMQQAVAMQQMQFQQALLMQQS 457
Query: 181 LTAQQAANRAASMKSATELAAARAAEISKKLKADGLVDEDKETKQKSRSPSTSRARSRSK 240
+TAQQAANRAA+MKSATELAAARAAEISKKL DG+ E+KETKQKSRSPS RSRSK
Sbjct: 458 MTAQQAANRAATMKSATELAAARAAEISKKLNPDGVGTEEKETKQKSRSPSPPHGRSRSK 517
Query: 241 SRSPVHYQRTYRARSRSKSRSPVSFHRRRRSRSFSPPYRHRRGHRSRSPLRSRHYSKYDN 300
SRSP++Y+R R+RS S P RH + HRSRSPLRS HYS YD
Sbjct: 518 SRSPINYRRRRRSRSYS-------------------PARHSKDHRSRSPLRSHHYSSYDR 558
Query: 301 ERLSTRDTRD---GADRSRRESDISHHSPVPRRRKSRSVSPHSRKSYRSDSGSPKHRQES 357
ER S RD R+ R + + HHS RR +SRSVSP++RKS S SPK +E+
Sbjct: 559 ERRSFRDIREHSDRYRRRDLDRSLDHHSSASRRNRSRSVSPYTRKS----SVSPKRHRET 614
Query: 358 S---ARKSSRAHSKSPKRHRGNRNSPRNDDAKPKYRHRSRSKSMER--HDEEKDEARDGK 412
S RK SRA S SP R RG+R+SP+ D+ K + R RSRS+S + H + +E GK
Sbjct: 615 SPHRGRKQSRADSGSPSRRRGSRSSPKIDEKKLRNRRRSRSRSSDDRLHSIKNEEISHGK 674
Query: 413 SQHRERKRSRSLSREDEHHGRGRSPAGNVDENKSKLRGRSRSVSALDKYKSSEIADDSRD 472
S+HRER+RSRSLS +++ H R RS VDE++S+ + R RS S D++ S E D++R
Sbjct: 675 SKHRERRRSRSLSVDEKPHRRSRSSPRKVDESRSRHKKRLRSKSVDDRHGSPERLDENRT 734
Query: 473 DRLRNRHKRRSRSKSVEGKMGGGSRD-----KKPKHHDRRRSRSISADG----------- 516
R R+ KR SRS+S E + R+ +K KH D +RSRS S +G
Sbjct: 735 RRSRHSDKRHSRSRSTETRDQTDVREDERKNQKSKHRDTKRSRSKSVEGKHRFKDKSGEN 794
Query: 517 --------------------KHHRGSRSPR-GLDESRTKLGRRSRSKSIERKLYRNRGRS 555
KH +G SP DE + + K+ Y +RG
Sbjct: 795 RDKKSKRRDRKRSRSISLEDKHDKGDTSPHINFDERNFEPTKSPEGKNHSSDKYGSRGE- 853
Query: 556 RSADGRRRKSMLSPANLDRSESNRRRHSA--SQSKDHANSESAETRDYKSMHHPHNWDKT 613
+S ++ S D S R + S+ K ++S SAE + HH + +
Sbjct: 854 KSEHQKKTPSKSKSEQFDGSGPLRGNYKEYDSKGKSPSDSGSAEVK-----HHLSDGENA 908
Query: 614 EGELNASL------------KDPTVMEDDGFLSSKQKNYDLKKSMENVSAHENHGIKSTD 661
E N+ L KD T++ D+G L+S NY ++S EN A +N G S +
Sbjct: 909 TSEENSKLFGDVFQEPIRTAKDSTILNDNGTLTSVNGNYKSEESSENAGADDNPGWISVE 968
>gi|356510930|ref|XP_003524186.1| PREDICTED: uncharacterized protein LOC100796921 [Glycine max]
Length = 969
Score = 338 bits (867), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 363/720 (50%), Positives = 438/720 (60%), Gaps = 89/720 (12%)
Query: 1 MTALAATTTMGTLSQVPMAPSAAAMAAAQAIVAAQALQAHAAQVQAQQSAKDLSGSPDKA 60
MTALAATT+MGTLSQ PMA +AA AA + A A QSAKD +GSP+KA
Sbjct: 273 MTALAATTSMGTLSQAPMA-PSAAAMAAAQAIVAAQALQAHAAQVQAQSAKDSAGSPEKA 331
Query: 61 GKADALKKTLQVSNLSPLLTVEQLRQLFSFCGTVVECTITDSKHFAYIEYSKPEEATAAL 120
K DALKKTLQVSNLSPLLTVEQL+QLF FCGTVVEC ITDSKHFAYIEYSKPEEATAAL
Sbjct: 332 SKDDALKKTLQVSNLSPLLTVEQLKQLFGFCGTVVECAITDSKHFAYIEYSKPEEATAAL 391
Query: 121 ALNNMDVGGRPLNVEMAKSFPQKPSHLNSSLAGSSLPMMMQQAVAMQQMQFQQALLMQQT 180
ALNN+DVGGRPLNVEMAKS PQKPS NSSLA SSLP+MMQQAVAMQQMQFQQALLMQQ+
Sbjct: 392 ALNNIDVGGRPLNVEMAKSLPQKPSVANSSLASSSLPLMMQQAVAMQQMQFQQALLMQQS 451
Query: 181 LTAQQAANRAASMKSATELAAARAAEISKKLKADGLVDEDKETKQKSRSPSTSRARSRSK 240
+TAQQAA RAA+MKSATELAAARAAEISKKL DG+ E+KETKQ SRS S R RSRSK
Sbjct: 452 MTAQQAATRAATMKSATELAAARAAEISKKLNPDGVGSEEKETKQNSRSSSPPRGRSRSK 511
Query: 241 SRSPVHYQRTYRARSRSKSRSPVSFHRRRRSRSFSPPYRHRRGHRSRSPLRSRHYSKYDN 300
SRSP+ Y+R R+RS S + RH + HRSRSPLR HYS YD
Sbjct: 512 SRSPISYRRRRRSRSYSPA-------------------RHSKDHRSRSPLRPHHYSSYDR 552
Query: 301 ERLSTRDTRD---GADRSRRESDISHHSPVPRRRKSRSVSPHSRKSYRSDSGSPKHRQES 357
ER S RD R+ R + + H S RR +SRSVSP++RKS SPK +E+
Sbjct: 553 ERRSYRDIREHSDRYRRRDSDRSLDHRSSASRRNRSRSVSPYTRKSPV----SPKCHRET 608
Query: 358 S---ARKSSRAHSKSPKRHRGNRNSPRNDDAKPKYRHRSRSKSMER--HDEEKDEARDGK 412
S RK SR S SP RG+R SP+ D+ K + R RSRS+S + H + +E GK
Sbjct: 609 SPHRGRKQSRVDSGSPSHRRGSRPSPKIDEKKLRNRRRSRSRSSDDRLHSSKNEEVLHGK 668
Query: 413 SQHRERKRSRSLSREDEHHGRGRSPAGNVDENKSKLRGRSRSVSALDKYKSSEIADDSRD 472
S+ RER+RS+SLS +++ H R RS VDE++S+ + RS S S D++ S E D++R+
Sbjct: 669 SKRRERRRSKSLSVDEKPHRRSRSSPRKVDESRSRHKKRSSSKSVDDRHDSPERLDENRN 728
Query: 473 DRLRNRHKR-------------------------------RSRSKSVEGK-----MGGGS 496
RLR+ KR RSRSKSVEGK G +
Sbjct: 729 RRLRHSDKRHSRSRSTDNRDQTDVREDESKNEKSKHRDTKRSRSKSVEGKRRSKDKSGEN 788
Query: 497 RDKKPKHHDRRRSRSISADGKHHRGSRSPR-GLDESRTKLGRRSRSKSIERKLYRNRGRS 555
RDKK KHHDRRRSRSIS + KH +G S LDE +L + K+ Y NRG
Sbjct: 789 RDKKSKHHDRRRSRSISLEDKHDKGGTSLHINLDERNFELTKSPEGKNHYSDKYGNRGE- 847
Query: 556 RSADGRRRKSMLSPANLDRSESNRRRHSA--SQSKDHANSESAETRDYKSMHHPHNWDKT 613
+S ++ S D S R + S+ K ++S SAE + HH ++ +
Sbjct: 848 KSEHQKKTPSKSKSGQFDGSGPLRGNYKEDDSKGKSPSDSGSAEVK-----HHLNDGESA 902
Query: 614 EGELNASL------------KDPTVMEDDGFLSSKQKNYDLKKSMENVSAHENHGIKSTD 661
E N+ L KD ++ D+G L+S NY + S EN A +N G S +
Sbjct: 903 TSEENSKLFGDVFQEPIINAKDSAILNDNGTLTSVNGNYKSEGSSENAGADDNPGWISVE 962
>gi|30687254|ref|NP_189032.2| RNA recognition motif (RRM)-containing protein [Arabidopsis
thaliana]
gi|334185580|ref|NP_001189958.1| RNA recognition motif (RRM)-containing protein [Arabidopsis
thaliana]
gi|332643307|gb|AEE76828.1| RNA recognition motif (RRM)-containing protein [Arabidopsis
thaliana]
gi|332643309|gb|AEE76830.1| RNA recognition motif (RRM)-containing protein [Arabidopsis
thaliana]
Length = 987
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 338/675 (50%), Positives = 412/675 (61%), Gaps = 102/675 (15%)
Query: 1 MTALAATTTMGTLSQVPMAPSAAAMAAAQAIVAAQALQAHAAQVQAQ-QSAKDLSGSPDK 59
MTA+AATT+MG LSQVPMAPSAAAMAAAQAIVAAQALQAHA+Q+QAQ QS K GSP+K
Sbjct: 284 MTAIAATTSMGNLSQVPMAPSAAAMAAAQAIVAAQALQAHASQMQAQAQSNKGSLGSPEK 343
Query: 60 AGKADALKKTLQVSNLSPLLTVEQLRQLFSFCGTVVECTITDSKHFAYIEYSKPEEATAA 119
D LKK LQVSNLSP LT EQLRQLFSFCGTVV+C+ITDSKH AYIEYS EEATAA
Sbjct: 344 GENGD-LKKFLQVSNLSPSLTTEQLRQLFSFCGTVVDCSITDSKHIAYIEYSNSEEATAA 402
Query: 120 LALNNMDVGGRPLNVEMAKSFPQKPSHLNSSLAGSSLPMMMQQAVAMQQMQFQQALLMQQ 179
LALNN +V GR LNVE+AKS P KPS NSS + MMQQAVAMQQMQFQQA+LMQQ
Sbjct: 403 LALNNTEVFGRALNVEIAKSLPHKPSSNNSSSSLPL---MMQQAVAMQQMQFQQAILMQQ 459
Query: 180 TLTAQQAANRAASMKSATELAAARAAEISKKLKADGLVDEDKETKQKSRSPSTSRARSRS 239
+ QQAANRAA+MKSATELAAARAAEIS+KL+ DG+ +++KE QKSRSPS
Sbjct: 460 AVATQQAANRAATMKSATELAAARAAEISRKLRPDGVGNDEKEADQKSRSPS-------- 511
Query: 240 KSRSPVHYQRTYRARSRSKSRSPVSFHRRRRSRSFSPPYRHRRGHRSRSPLRSRHYSKYD 299
+SP ARSRSKS+SP+S+ RRRRS ++SPP+R R HRSRSPLR + S Y+
Sbjct: 512 --KSP--------ARSRSKSKSPISYRRRRRSPTYSPPFRRPRSHRSRSPLRYQRRSTYE 561
Query: 300 NERLSTRDTRDGADRSRRESDISHHSPVPRRRKSRSVSPHSRKSYRSDS---GSPKHRQE 356
R S RD+RD ++ R HHS R+SRSVSP RKS + DS +
Sbjct: 562 GRRRSYRDSRDISESRRYGRSDEHHSS--SSRRSRSVSPKKRKSGQEDSELSRLRRDSSS 619
Query: 357 SSARKSSRAHSKSPKRHRGNRNSPRNDDA-KPKYRHRSRSKSMERHDEEKDEARDGKSQH 415
+KSSRA S+SP+R + +++PR+D+ K K R RSRS+S+E + KD++RD +
Sbjct: 620 RGEKKSSRAGSRSPRRRKEVKSTPRDDEENKVKRRTRSRSRSVEDSADIKDKSRD---EE 676
Query: 416 RERKRSRSLSREDEHHGRGRSPAGNVDENKSKLRGRSRSVSALDKYKSSEIADDSRDDRL 475
+ + RS SR E + R + N DE K K R RSRS S + S E D ++D+ L
Sbjct: 677 LKHHKKRSRSRSREDRSKTRDTSRNSDEAKQKHRQRSRSRSLENDNGSHENVDVAQDNDL 736
Query: 476 RNRH-KRRSRS----------------------------------------------KSV 488
+RH KRRS+S KSV
Sbjct: 737 NSRHSKRRSKSLDEDYDMKERRGRSRSRSLETKNRSSRKNKLDEDRNTGSRRRRSRSKSV 796
Query: 489 EGKMGGG----SRDKKPKHHDRRRSRSISADGKHHRGSRSPRGL-DESRTKLGRRSRSKS 543
EGK SRDKK K RRSRS S++GK R RS G DE +++ R SRS+S
Sbjct: 797 EGKRSYNKETRSRDKKSKRRSGRRSRSPSSEGKQGRDIRSSPGYSDEKKSRHKRHSRSRS 856
Query: 544 IERKL----------YRNRGRSRSADGRRRKSMLSPANLDRSESN--RRRHSASQS---K 588
IE+K R R S D RR LSP + SE + ++RHS S+S K
Sbjct: 857 IEKKNSSRDKRSKRHERLRSSSPGRDKRRGDRSLSPVS---SEDHKIKKRHSGSKSVKEK 913
Query: 589 DHANSESAETRDYKS 603
H++ E + D S
Sbjct: 914 PHSDYEKVDDGDANS 928
>gi|9294658|dbj|BAB03007.1| unnamed protein product [Arabidopsis thaliana]
Length = 1006
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 338/675 (50%), Positives = 412/675 (61%), Gaps = 102/675 (15%)
Query: 1 MTALAATTTMGTLSQVPMAPSAAAMAAAQAIVAAQALQAHAAQVQAQ-QSAKDLSGSPDK 59
MTA+AATT+MG LSQVPMAPSAAAMAAAQAIVAAQALQAHA+Q+QAQ QS K GSP+K
Sbjct: 284 MTAIAATTSMGNLSQVPMAPSAAAMAAAQAIVAAQALQAHASQMQAQAQSNKGSLGSPEK 343
Query: 60 AGKADALKKTLQVSNLSPLLTVEQLRQLFSFCGTVVECTITDSKHFAYIEYSKPEEATAA 119
D LKK LQVSNLSP LT EQLRQLFSFCGTVV+C+ITDSKH AYIEYS EEATAA
Sbjct: 344 GENGD-LKKFLQVSNLSPSLTTEQLRQLFSFCGTVVDCSITDSKHIAYIEYSNSEEATAA 402
Query: 120 LALNNMDVGGRPLNVEMAKSFPQKPSHLNSSLAGSSLPMMMQQAVAMQQMQFQQALLMQQ 179
LALNN +V GR LNVE+AKS P KPS NSS + MMQQAVAMQQMQFQQA+LMQQ
Sbjct: 403 LALNNTEVFGRALNVEIAKSLPHKPSSNNSSSSLPL---MMQQAVAMQQMQFQQAILMQQ 459
Query: 180 TLTAQQAANRAASMKSATELAAARAAEISKKLKADGLVDEDKETKQKSRSPSTSRARSRS 239
+ QQAANRAA+MKSATELAAARAAEIS+KL+ DG+ +++KE QKSRSPS
Sbjct: 460 AVATQQAANRAATMKSATELAAARAAEISRKLRPDGVGNDEKEADQKSRSPS-------- 511
Query: 240 KSRSPVHYQRTYRARSRSKSRSPVSFHRRRRSRSFSPPYRHRRGHRSRSPLRSRHYSKYD 299
+SP ARSRSKS+SP+S+ RRRRS ++SPP+R R HRSRSPLR + S Y+
Sbjct: 512 --KSP--------ARSRSKSKSPISYRRRRRSPTYSPPFRRPRSHRSRSPLRYQRRSTYE 561
Query: 300 NERLSTRDTRDGADRSRRESDISHHSPVPRRRKSRSVSPHSRKSYRSDS---GSPKHRQE 356
R S RD+RD ++ R HHS R+SRSVSP RKS + DS +
Sbjct: 562 GRRRSYRDSRDISESRRYGRSDEHHSS--SSRRSRSVSPKKRKSGQEDSELSRLRRDSSS 619
Query: 357 SSARKSSRAHSKSPKRHRGNRNSPRNDDA-KPKYRHRSRSKSMERHDEEKDEARDGKSQH 415
+KSSRA S+SP+R + +++PR+D+ K K R RSRS+S+E + KD++RD +
Sbjct: 620 RGEKKSSRAGSRSPRRRKEVKSTPRDDEENKVKRRTRSRSRSVEDSADIKDKSRD---EE 676
Query: 416 RERKRSRSLSREDEHHGRGRSPAGNVDENKSKLRGRSRSVSALDKYKSSEIADDSRDDRL 475
+ + RS SR E + R + N DE K K R RSRS S + S E D ++D+ L
Sbjct: 677 LKHHKKRSRSRSREDRSKTRDTSRNSDEAKQKHRQRSRSRSLENDNGSHENVDVAQDNDL 736
Query: 476 RNRH-KRRSRS----------------------------------------------KSV 488
+RH KRRS+S KSV
Sbjct: 737 NSRHSKRRSKSLDEDYDMKERRGRSRSRSLETKNRSSRKNKLDEDRNTGSRRRRSRSKSV 796
Query: 489 EGKMGGG----SRDKKPKHHDRRRSRSISADGKHHRGSRSPRGL-DESRTKLGRRSRSKS 543
EGK SRDKK K RRSRS S++GK R RS G DE +++ R SRS+S
Sbjct: 797 EGKRSYNKETRSRDKKSKRRSGRRSRSPSSEGKQGRDIRSSPGYSDEKKSRHKRHSRSRS 856
Query: 544 IERKL----------YRNRGRSRSADGRRRKSMLSPANLDRSESN--RRRHSASQS---K 588
IE+K R R S D RR LSP + SE + ++RHS S+S K
Sbjct: 857 IEKKNSSRDKRSKRHERLRSSSPGRDKRRGDRSLSPVS---SEDHKIKKRHSGSKSVKEK 913
Query: 589 DHANSESAETRDYKS 603
H++ E + D S
Sbjct: 914 PHSDYEKVDDGDANS 928
>gi|79313347|ref|NP_001030753.1| RNA recognition motif (RRM)-containing protein [Arabidopsis
thaliana]
gi|332643308|gb|AEE76829.1| RNA recognition motif (RRM)-containing protein [Arabidopsis
thaliana]
Length = 934
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 338/675 (50%), Positives = 412/675 (61%), Gaps = 102/675 (15%)
Query: 1 MTALAATTTMGTLSQVPMAPSAAAMAAAQAIVAAQALQAHAAQVQAQ-QSAKDLSGSPDK 59
MTA+AATT+MG LSQVPMAPSAAAMAAAQAIVAAQALQAHA+Q+QAQ QS K GSP+K
Sbjct: 284 MTAIAATTSMGNLSQVPMAPSAAAMAAAQAIVAAQALQAHASQMQAQAQSNKGSLGSPEK 343
Query: 60 AGKADALKKTLQVSNLSPLLTVEQLRQLFSFCGTVVECTITDSKHFAYIEYSKPEEATAA 119
D LKK LQVSNLSP LT EQLRQLFSFCGTVV+C+ITDSKH AYIEYS EEATAA
Sbjct: 344 GENGD-LKKFLQVSNLSPSLTTEQLRQLFSFCGTVVDCSITDSKHIAYIEYSNSEEATAA 402
Query: 120 LALNNMDVGGRPLNVEMAKSFPQKPSHLNSSLAGSSLPMMMQQAVAMQQMQFQQALLMQQ 179
LALNN +V GR LNVE+AKS P KPS NSS + MMQQAVAMQQMQFQQA+LMQQ
Sbjct: 403 LALNNTEVFGRALNVEIAKSLPHKPSSNNSSSSLPL---MMQQAVAMQQMQFQQAILMQQ 459
Query: 180 TLTAQQAANRAASMKSATELAAARAAEISKKLKADGLVDEDKETKQKSRSPSTSRARSRS 239
+ QQAANRAA+MKSATELAAARAAEIS+KL+ DG+ +++KE QKSRSPS
Sbjct: 460 AVATQQAANRAATMKSATELAAARAAEISRKLRPDGVGNDEKEADQKSRSPS-------- 511
Query: 240 KSRSPVHYQRTYRARSRSKSRSPVSFHRRRRSRSFSPPYRHRRGHRSRSPLRSRHYSKYD 299
+SP ARSRSKS+SP+S+ RRRRS ++SPP+R R HRSRSPLR + S Y+
Sbjct: 512 --KSP--------ARSRSKSKSPISYRRRRRSPTYSPPFRRPRSHRSRSPLRYQRRSTYE 561
Query: 300 NERLSTRDTRDGADRSRRESDISHHSPVPRRRKSRSVSPHSRKSYRSDS---GSPKHRQE 356
R S RD+RD ++ R HHS R+SRSVSP RKS + DS +
Sbjct: 562 GRRRSYRDSRDISESRRYGRSDEHHSS--SSRRSRSVSPKKRKSGQEDSELSRLRRDSSS 619
Query: 357 SSARKSSRAHSKSPKRHRGNRNSPRNDDA-KPKYRHRSRSKSMERHDEEKDEARDGKSQH 415
+KSSRA S+SP+R + +++PR+D+ K K R RSRS+S+E + KD++RD +
Sbjct: 620 RGEKKSSRAGSRSPRRRKEVKSTPRDDEENKVKRRTRSRSRSVEDSADIKDKSRD---EE 676
Query: 416 RERKRSRSLSREDEHHGRGRSPAGNVDENKSKLRGRSRSVSALDKYKSSEIADDSRDDRL 475
+ + RS SR E + R + N DE K K R RSRS S + S E D ++D+ L
Sbjct: 677 LKHHKKRSRSRSREDRSKTRDTSRNSDEAKQKHRQRSRSRSLENDNGSHENVDVAQDNDL 736
Query: 476 RNRH-KRRSRS----------------------------------------------KSV 488
+RH KRRS+S KSV
Sbjct: 737 NSRHSKRRSKSLDEDYDMKERRGRSRSRSLETKNRSSRKNKLDEDRNTGSRRRRSRSKSV 796
Query: 489 EGKMGGG----SRDKKPKHHDRRRSRSISADGKHHRGSRSPRGL-DESRTKLGRRSRSKS 543
EGK SRDKK K RRSRS S++GK R RS G DE +++ R SRS+S
Sbjct: 797 EGKRSYNKETRSRDKKSKRRSGRRSRSPSSEGKQGRDIRSSPGYSDEKKSRHKRHSRSRS 856
Query: 544 IERKL----------YRNRGRSRSADGRRRKSMLSPANLDRSESN--RRRHSASQS---K 588
IE+K R R S D RR LSP + SE + ++RHS S+S K
Sbjct: 857 IEKKNSSRDKRSKRHERLRSSSPGRDKRRGDRSLSPVS---SEDHKIKKRHSGSKSVKEK 913
Query: 589 DHANSESAETRDYKS 603
H++ E + D S
Sbjct: 914 PHSDYEKVDDGDANS 928
>gi|297835442|ref|XP_002885603.1| hypothetical protein ARALYDRAFT_898933 [Arabidopsis lyrata subsp.
lyrata]
gi|297331443|gb|EFH61862.1| hypothetical protein ARALYDRAFT_898933 [Arabidopsis lyrata subsp.
lyrata]
Length = 985
Score = 241 bits (615), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 254/415 (61%), Positives = 299/415 (72%), Gaps = 29/415 (6%)
Query: 1 MTALAATTTMGTLSQVPMAPSAAAMAAAQAIVAAQALQAHAAQVQAQ-QSAKDLSGSPDK 59
MTA+AATT+MG +SQVPMAPSAAAMAAAQAIVAAQALQAHA+Q+QAQ QS K GSP+K
Sbjct: 282 MTAIAATTSMGNMSQVPMAPSAAAMAAAQAIVAAQALQAHASQMQAQAQSNKGSLGSPEK 341
Query: 60 AGKADALKKTLQVSNLSPLLTVEQLRQLFSFCGTVVECTITDSKHFAYIEYSKPEEATAA 119
D+LKK LQVSNLSP LT EQLRQLFSFCGTVV+C+ITDSKH AYIEYS EEATAA
Sbjct: 342 GENGDSLKKFLQVSNLSPSLTTEQLRQLFSFCGTVVDCSITDSKHLAYIEYSNSEEATAA 401
Query: 120 LALNNMDVGGRPLNVEMAKSFPQKPSHLNSSLAGSSLPMMMQQAVAMQQMQFQQALLMQQ 179
LALNN +V GRPLNVE+AKS P KPS NSS + MMQQAVAMQQMQFQQA+LMQQ
Sbjct: 402 LALNNTEVFGRPLNVEIAKSLPHKPSSNNSSSSLPL---MMQQAVAMQQMQFQQAILMQQ 458
Query: 180 TLTAQQAANRAASMKSATELAAARAAEISKKLKADGLVDEDKETKQKSRSPSTSRARSRS 239
+ QQAANRAA+MKSATELAAARAAEIS+KL+ DG+ ++ KE QKSRSPS S
Sbjct: 459 AVATQQAANRAATMKSATELAAARAAEISRKLRPDGVGNDVKEADQKSRSPSKSPG---- 514
Query: 240 KSRSPVHYQRTYRARSRSKSRSPVSFHRRRRSRSFSPPYRHRRGHRSRSPLRSRHYSKYD 299
SRSKS+SP+S+ RRRRSRS+SPP+R R HRSRSPLR S Y+
Sbjct: 515 ---------------SRSKSKSPISYRRRRRSRSYSPPFRRPRSHRSRSPLRYHRRSTYE 559
Query: 300 NERLSTRDTRDGADRSRRESDISHHSPVPRRRKSRSVSPHSRKSYRSD---SGSPKHRQE 356
R S RD+RD ++ R HHS R+SRSVSP RKS + D S +
Sbjct: 560 GRRRSYRDSRDISESRRYGRSDEHHS--SSSRRSRSVSPKKRKSGQEDLELSRHRRDSSS 617
Query: 357 SSARKSSRAHSKSPKRHRGNRNSPRNDDA-KPKYRHRSRSKSMERHDEEKDEARD 410
+KSSRA S+SP+R + +++PR+D+ K K R RSRS+S+E + KDE+RD
Sbjct: 618 RGDKKSSRAGSRSPRRRKEVKSTPRDDEENKLKRRTRSRSRSVEDSADMKDESRD 672
>gi|326517609|dbj|BAK03723.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 990
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 228/389 (58%), Positives = 288/389 (74%), Gaps = 31/389 (7%)
Query: 1 MTALAATTTMGTLSQVPMAPSAAAMAAAQAIVAAQALQAHAAQVQAQ-QSAKDLSGSPDK 59
++ +AATT+MG LS PMAPSAAAMAAAQAI+AAQALQAHAA++QA ++A+ S +
Sbjct: 297 VSVMAATTSMGALSHAPMAPSAAAMAAAQAIMAAQALQAHAAKMQADSKAAEQASSGMTE 356
Query: 60 AGKADALKKTLQVSNLSPLLTVEQLRQLFSFCGTVVECTITDSKHFAYIEYSKPEEATAA 119
A KA+ALKK +Q+SNLSP+LTVE ++QLF +CG VV+CTIT+SKH AY+EYSKPEEATAA
Sbjct: 357 AEKAEALKKIVQISNLSPVLTVENIKQLFGYCGKVVDCTITESKHIAYVEYSKPEEATAA 416
Query: 120 LALNNMDVGGRPLNVEMAKSFPQKPSHLNSSLAGSSLPMMMQQAVAMQQMQFQQALLMQQ 179
LAL+N+DVGGRPLNVEMAKS PQK +S+A S+LPMMMQQAV MQQMQFQQ+LLMQ
Sbjct: 417 LALSNVDVGGRPLNVEMAKSLPQK-----TSIANSNLPMMMQQAVQMQQMQFQQSLLMQT 471
Query: 180 TLTAQQAANRAASMKSATELAAARAAEISKKLKADGLVDEDKETKQKSRSPSTSRARSRS 239
++ AQQAA RAA+MK+AT+ AAARAAEIS+KLKA+G E E K
Sbjct: 472 SIAAQQAAVRAATMKNATDAAAARAAEISRKLKAEGFGGESAEEKD-------------- 517
Query: 240 KSRSPVHYQRTYRARSRSKSRSPVSFHRRRRSRSFSPPYRHRRGHRSRSPLRSRHYSKYD 299
++ RS+S+SRSP+ + R RR RS+SPP R R HRSRSP RS HYSKY
Sbjct: 518 -AKEKSRSPSPPSRRSKSRSRSPIKYRRSRRDRSYSPPVRRPRDHRSRSPSRS-HYSKYG 575
Query: 300 NERLSTRDTRDGADRS-RRESDIS--HHSPVPRRRKSRSVSPHSRKSYRSDSGSPKHRQE 356
++R S RD RD RS RRESD S H+S RR +SRS+SP S+K R+DS SPK ++E
Sbjct: 576 SDR-SYRDDRDKYSRSGRRESDQSRDHYSSSSRRNRSRSISPRSKKPSRADSRSPKRQRE 634
Query: 357 SS-----ARKSSRAHSKSPKRHRGNRNSP 380
S +R+++RA S+SP+ H+G+++SP
Sbjct: 635 ESLSPSKSRRAARAGSRSPRHHKGSKSSP 663
>gi|125524053|gb|EAY72167.1| hypothetical protein OsI_00016 [Oryza sativa Indica Group]
Length = 920
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 229/393 (58%), Positives = 277/393 (70%), Gaps = 32/393 (8%)
Query: 1 MTALAATTTMGTLSQVPMAPSAAAMAAAQAIVAAQALQAHAAQV--QAQQSAKDLSGSPD 58
M+ LAATT++G LSQ PMAPSAAAMAAAQAI+AAQALQAHAAQ+ ++ + + SGS D
Sbjct: 231 MSVLAATTSVGALSQAPMAPSAAAMAAAQAIMAAQALQAHAAQMQADSKAAGGEASGSTD 290
Query: 59 KAGKADALKKTLQVSNLSPLLTVEQLRQLFSFCGTVVECTITDSKHFAYIEYSKPEEATA 118
K K D LKK +Q+SNLSPLLTV+ ++QLF +CG VV+CTITDSKH AY+EYSK EEATA
Sbjct: 291 KTDKGDVLKKMVQISNLSPLLTVDHIKQLFGYCGKVVDCTITDSKHIAYVEYSKQEEATA 350
Query: 119 ALALNNMDVGGRPLNVEMAKSFPQKPSHLNSSLAGSSLPMMMQQAVAMQQMQFQQALLMQ 178
ALALNNMDVGGRPLNVEMAKS P K ++LA S+LPMMMQQAV +QQMQFQQAL+MQ
Sbjct: 351 ALALNNMDVGGRPLNVEMAKSLPPK-----TNLANSNLPMMMQQAVQLQQMQFQQALIMQ 405
Query: 179 QTLTAQQAANRAASMKSATELAAARAAEISKKLKADGLVDEDKETKQKSRSPSTSRARSR 238
QT+ AQQAA RAA+MKSATE AAARAAEIS+KLKA+G E E K +R
Sbjct: 406 QTIAAQQAAARAATMKSATEAAAARAAEISRKLKAEGFGGETVEEKD-----------AR 454
Query: 239 SKSRSPVHYQRTYRARSRSKSRSPVSFHRRRRSRSFSPPYRHRRGHRSRSPLRSRHYSKY 298
KSRSP RS+S+SRSP+ + R RRSRS+SPP RH RG RSRS ++SKY
Sbjct: 455 GKSRSP----SPSARRSKSRSRSPIKYRRSRRSRSYSPPVRHTRGRRSRS-PSRSYHSKY 509
Query: 299 DNERLSTRDTRDGADRS-RRESDIS---HHSPVPRRRKSRSVSPHSRKSYRSDSGSPKHR 354
++R S RD RD RS RRESD S + S R R H + S +HR
Sbjct: 510 GSDR-SYRDDRDKYGRSGRRESDRSRDHYSSSSRRNRSRSISPRHKKSSRSDSRSPKRHR 568
Query: 355 QE----SSARKSSRAHSKSPKRHRGNRNSPRND 383
+E S +R+S+RA S+SP +H+G++ SP D
Sbjct: 569 EESLSPSKSRRSARAGSRSPGQHKGSKLSPTRD 601
>gi|115433970|ref|NP_001041743.1| Os01g0101600 [Oryza sativa Japonica Group]
gi|52076599|dbj|BAD45501.1| nuclear protein -like [Oryza sativa Japonica Group]
gi|113531274|dbj|BAF03657.1| Os01g0101600 [Oryza sativa Japonica Group]
gi|125568671|gb|EAZ10186.1| hypothetical protein OsJ_00013 [Oryza sativa Japonica Group]
gi|215712245|dbj|BAG94372.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768572|dbj|BAH00801.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 978
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 229/393 (58%), Positives = 277/393 (70%), Gaps = 32/393 (8%)
Query: 1 MTALAATTTMGTLSQVPMAPSAAAMAAAQAIVAAQALQAHAAQV--QAQQSAKDLSGSPD 58
M+ LAATT++G LSQ PMAPSAAAMAAAQAI+AAQALQAHAAQ+ ++ + + SGS D
Sbjct: 289 MSVLAATTSVGALSQAPMAPSAAAMAAAQAIMAAQALQAHAAQMQADSKAAGGEASGSTD 348
Query: 59 KAGKADALKKTLQVSNLSPLLTVEQLRQLFSFCGTVVECTITDSKHFAYIEYSKPEEATA 118
K K D LKK +Q+SNLSPLLTV+ ++QLF +CG VV+CTITDSKH AY+EYSK EEATA
Sbjct: 349 KTDKGDVLKKMVQISNLSPLLTVDHIKQLFGYCGKVVDCTITDSKHIAYVEYSKQEEATA 408
Query: 119 ALALNNMDVGGRPLNVEMAKSFPQKPSHLNSSLAGSSLPMMMQQAVAMQQMQFQQALLMQ 178
ALALNNMDVGGRPLNVEMAKS P K ++LA S+LPMMMQQAV +QQMQFQQAL+MQ
Sbjct: 409 ALALNNMDVGGRPLNVEMAKSLPPK-----TNLANSNLPMMMQQAVQLQQMQFQQALIMQ 463
Query: 179 QTLTAQQAANRAASMKSATELAAARAAEISKKLKADGLVDEDKETKQKSRSPSTSRARSR 238
QT+ AQQAA RAA+MKSATE AAARAAEIS+KLKA+G E E K +R
Sbjct: 464 QTIAAQQAAARAATMKSATEAAAARAAEISRKLKAEGFGGETVEEKD-----------AR 512
Query: 239 SKSRSPVHYQRTYRARSRSKSRSPVSFHRRRRSRSFSPPYRHRRGHRSRSPLRSRHYSKY 298
KSRSP RS+S+SRSP+ + R RRSRS+SPP RH RG RSRS ++SKY
Sbjct: 513 GKSRSP----SPSARRSKSRSRSPIKYRRSRRSRSYSPPVRHTRGRRSRS-PSRSYHSKY 567
Query: 299 DNERLSTRDTRDGADRS-RRESDIS---HHSPVPRRRKSRSVSPHSRKSYRSDSGSPKHR 354
++R S RD RD RS RRESD S + S R R H + S +HR
Sbjct: 568 GSDR-SYRDDRDKYGRSGRRESDRSRDHYSSSSRRNRSRSISPRHKKSSRSDSRSPKRHR 626
Query: 355 QE----SSARKSSRAHSKSPKRHRGNRNSPRND 383
+E S +R+S+RA S+SP +H+G++ SP D
Sbjct: 627 EESLSPSKSRRSARAGSRSPGQHKGSKLSPTRD 659
>gi|15128444|dbj|BAB62628.1| P0402A09.11 [Oryza sativa Japonica Group]
gi|20804433|dbj|BAB92130.1| P0455C04.5 [Oryza sativa Japonica Group]
Length = 990
Score = 199 bits (505), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 221/405 (54%), Positives = 269/405 (66%), Gaps = 44/405 (10%)
Query: 1 MTALAATTTMGTLSQVPMAPSAAAMAAAQAIVA--------------AQALQAHAAQVQA 46
M+ LAATT++G LSQ PMAPSAAAMAAAQAI+A ++A A+ A
Sbjct: 289 MSVLAATTSVGALSQAPMAPSAAAMAAAQAIMAAQALQAHAAQMQADSKAAGGEASGYIA 348
Query: 47 QQSAKDLSGSPDKAGKADALKKTLQVSNLSPLLTVEQLRQLFSFCGTVVECTITDSKHFA 106
+ + GS DK K D LKK +Q+SNLSPLLTV+ ++QLF +CG VV+CTITDSKH A
Sbjct: 349 YVARSIVVGSTDKTDKGDVLKKMVQISNLSPLLTVDHIKQLFGYCGKVVDCTITDSKHIA 408
Query: 107 YIEYSKPEEATAALALNNMDVGGRPLNVEMAKSFPQKPSHLNSSLAGSSLPMMMQQAVAM 166
Y+EYSK EEATAALALNNMDVGGRPLNVEMAKS P K ++LA S+LPMMMQQAV +
Sbjct: 409 YVEYSKQEEATAALALNNMDVGGRPLNVEMAKSLPPK-----TNLANSNLPMMMQQAVQL 463
Query: 167 QQMQFQQALLMQQTLTAQQAANRAASMKSATELAAARAAEISKKLKADGLVDEDKETKQK 226
QQMQFQQAL+MQQT+ AQQAA RAA+MKSATE AAARAAEIS+KLKA+G E E K
Sbjct: 464 QQMQFQQALIMQQTIAAQQAAARAATMKSATEAAAARAAEISRKLKAEGFGGETVEEKD- 522
Query: 227 SRSPSTSRARSRSKSRSPVHYQRTYRARSRSKSRSPVSFHRRRRSRSFSPPYRHRRGHRS 286
+R KSRSP RS+S+SRSP+ + R RRSRS+SPP RH RG RS
Sbjct: 523 ----------ARGKSRSP----SPSARRSKSRSRSPIKYRRSRRSRSYSPPVRHTRGRRS 568
Query: 287 RSPLRSRHYSKYDNERLSTRDTRDGADRS-RRESDIS---HHSPVPRRRKSRSVSPHSRK 342
RS ++SKY ++R S RD RD RS RRESD S + S R R H +
Sbjct: 569 RS-PSRSYHSKYGSDR-SYRDDRDKYGRSGRRESDRSRDHYSSSSRRNRSRSISPRHKKS 626
Query: 343 SYRSDSGSPKHRQE----SSARKSSRAHSKSPKRHRGNRNSPRND 383
S +HR+E S +R+S+RA S+SP +H+G++ SP D
Sbjct: 627 SRSDSRSPKRHREESLSPSKSRRSARAGSRSPGQHKGSKLSPTRD 671
>gi|414876768|tpg|DAA53899.1| TPA: hypothetical protein ZEAMMB73_403376 [Zea mays]
gi|414876769|tpg|DAA53900.1| TPA: hypothetical protein ZEAMMB73_403376 [Zea mays]
Length = 924
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 232/498 (46%), Positives = 302/498 (60%), Gaps = 72/498 (14%)
Query: 54 SGSPDKAGKADALKKTLQVSNLSPLLTVEQLRQLFSFCGTVVECTITDSKHFAYIEYSKP 113
SGS +KA +ADALK+T+Q+SNLSPLLTV+ ++QLF FCG VV+C +TD+K Y+EYSKP
Sbjct: 327 SGSTNKADEADALKRTVQISNLSPLLTVDYIKQLFGFCGKVVDCVMTDTKQIVYVEYSKP 386
Query: 114 EEATAALALNNMDVGGRPLNVEMAKSFPQKPSHLNSSLAGSSLPMMMQQAVAMQQMQFQQ 173
EEATAAL LN+ VGGRPLNVEMAK+ P K A ++LPMMMQQAV +QQ+QFQQ
Sbjct: 387 EEATAALELNSKSVGGRPLNVEMAKALPPK--------ANNNLPMMMQQAVQLQQIQFQQ 438
Query: 174 ALLMQQTLTAQQAANRAASMKSATELAAARAAEISKKLKADGLVD---EDKETKQKSRSP 230
AL+MQQ++ AQQAA RAA+MKSATE AAARAAEIS+KLKA+G E+K+ K KS SP
Sbjct: 439 ALMMQQSIAAQQAAARAATMKSATEAAAARAAEISRKLKAEGFGGDNMEEKDAKGKSGSP 498
Query: 231 STSRARSRSKSRSPVHYQRTYRARSRSKSRSPVSFHRRRRSRSFSPPYRHRRGHRSRSPL 290
S+ RS+S+SRSP+ + R+R PV R RSRS S
Sbjct: 499 SSPTRRSKSRSRSPI---KYRRSRRSRSYSPPVGRSREHRSRSPS--------------- 540
Query: 291 RSRHYSKYDNERLSTRDTRDGADRS-RRESDIS--HHSPVPRRRKSRSVSPHSRKSYRSD 347
+SK+ ++R S RD +D RS RRES+ S HHS RR +S+S SP +K R D
Sbjct: 541 -RSRHSKHGSDR-SHRDDKDMYSRSGRRESERSRDHHSSRSRRNRSKSRSPRHKKPSRVD 598
Query: 348 SGSP-KHRQES---SARKSSRAHSKSPKRHRGNRNSPRNDDAKPKYRHRSRSKSMER--H 401
S SP K R ES S +S+RA S+SP+ H+G+++SP +D ++ SRS+S++R H
Sbjct: 599 SRSPKKQRLESLSPSKSRSARAGSRSPRHHKGSKSSPTSDRHS-RHSRHSRSRSLDRKHH 657
Query: 402 DEEKDEARDGKSQHRERKRSRSLSREDEHHGRGRSPAGNVDENKSKLRG-RSRSVSALDK 460
+K ++R KS+ ++ +RS SR D+ DE+ K G RS S DK
Sbjct: 658 HSDKKDSR--KSEIQDDRRSHRGSRRDK------------DESSVKDDGERSHRGSRRDK 703
Query: 461 YKSSEIADDSRDDRLRNRHKRRSRSKSVEGKMGGGSRDKKPKHHDRRRSR---SISADG- 516
+SS D R R R+K S K D + H RR + S+ DG
Sbjct: 704 DESSVKDDGERSHRGSRRNKDESSVKD----------DGERSHRGSRRDKDESSVKDDGE 753
Query: 517 KHHRGSRSPRGLDESRTK 534
+ HRGSR RG DES K
Sbjct: 754 RSHRGSR--RGKDESSVK 769
>gi|357134255|ref|XP_003568733.1| PREDICTED: uncharacterized protein LOC100843156 [Brachypodium
distachyon]
Length = 786
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 222/391 (56%), Positives = 277/391 (70%), Gaps = 36/391 (9%)
Query: 1 MTALAATTTMGTLSQVPMAPSAAAMAAAQAIVAAQALQAHAAQVQAQQS--AKDLSGSPD 58
M+ +AAT+++G LS PMAPSAAAMAAAQAI+AAQALQAHAA S A +GS D
Sbjct: 287 MSVMAATSSVGALSHAPMAPSAAAMAAAQAIMAAQALQAHAAAQMQADSKAAAQSTGSVD 346
Query: 59 KAGKADALKKTLQVSNLSPLLTVEQLRQLFSFCGTVVECTITDSKHFAYIEYSKPEEATA 118
KA +ALKK +Q+SNLS LLTVE L+QLF +CG VV+CTIT++K AY+EYSKPEEATA
Sbjct: 347 KA---EALKKMVQISNLSLLLTVEHLKQLFGYCGKVVDCTITETKQTAYVEYSKPEEATA 403
Query: 119 ALALNNMDVGGRPLNVEMAKSFPQKPSHLNSSLAGSSLPMMMQQAVAMQQMQFQQALLMQ 178
ALALNNMDVGGRPLNVEMAK+ P K ++LA S+LPMMMQQAV +QQMQFQQAL+MQ
Sbjct: 404 ALALNNMDVGGRPLNVEMAKTLPPK-----TNLANSNLPMMMQQAVQLQQMQFQQALMMQ 458
Query: 179 QTLTAQQAANRAASMKSATELAAARAAEISKKLKADGLVDEDKETKQKSRSPSTSRARSR 238
Q++ QQAA RAA+MKSATE AAARAAEIS+KLKA+G E+ E
Sbjct: 459 QSIATQQAAARAATMKSATEAAAARAAEISRKLKAEGFGGENVE---------------E 503
Query: 239 SKSRSPVHYQRTYRARSRSKSRSPVSFHRRRRSRSFSPPYRHRRGHRSRSPLRSRHYSKY 298
+ ++ RS+S+SRSP+ + R RR S+SPP R R HRSRS H+SKY
Sbjct: 504 NDAKGKSRSPSPPSRRSKSRSRSPIKYRRSRRDHSYSPPVRRSREHRSRS-PSRSHHSKY 562
Query: 299 DNERLSTRDTRDGADRS-RRESDIS--HHSPVPRRRKSRSVSPHSRKSYRSDSGSPK-HR 354
+ER S RD D RS RRE+D S H+S RR +S+S+SP +KS R+DS SPK HR
Sbjct: 563 GSER-SHRDDSDKYSRSRRRETDRSRDHYSSSSRRNRSKSISPRYKKSSRADSRSPKRHR 621
Query: 355 QESS-----ARKSSRAHSKSPKRHRGNRNSP 380
+E S +R+S+RA S+SP+ H+G+++SP
Sbjct: 622 EEESLRSSKSRRSARAGSRSPRHHKGSKSSP 652
>gi|226505274|ref|NP_001145712.1| uncharacterized protein LOC100279216 [Zea mays]
gi|219884125|gb|ACL52437.1| unknown [Zea mays]
Length = 787
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 186/332 (56%), Positives = 232/332 (69%), Gaps = 32/332 (9%)
Query: 59 KAGKADALKKTLQVSNLSPLLTVEQLRQLFSFCGTVVECTITDSKHFAYIEYSKPEEATA 118
KA +ADALK+T+Q+SNLSPLLTV+ ++QLF CG VV+CTITDSKH AY+EYSKPEEATA
Sbjct: 332 KADEADALKRTVQISNLSPLLTVDYVKQLFGLCGKVVDCTITDSKHIAYVEYSKPEEATA 391
Query: 119 ALALNNMDVGGRPLNVEMAKSFPQKPSHLNSSLAGSSLPMMMQQAVAMQQMQFQQALLMQ 178
AL NN +VGGRPLNVEMAKS P K A ++LPMMMQQA+ +QQMQFQQAL+MQ
Sbjct: 392 ALEFNNKNVGGRPLNVEMAKSLPSK--------ANNNLPMMMQQAIQLQQMQFQQALMMQ 443
Query: 179 QTLTAQQAANRAASMKSATELAAARAAEISKKLKADGLVDEDKETKQKSRSPSTSRARSR 238
Q++ QQAA RAA+MKSATE AAARAAEIS+KLKA+G ++ E K ++
Sbjct: 444 QSIATQQAAARAATMKSATEAAAARAAEISRKLKAEGFGADNMEEKH-----------AK 492
Query: 239 SKSRSPVHYQRTYRARSRSKSRSPVSFHRRRRSRSFSPPYRHRRGHRSRSPLRSRHYSKY 298
KSRSP RS+S+SRSP+ + R RRSRS+SPP R R RSRSP +SRH SKY
Sbjct: 493 GKSRSP----SPSTRRSKSRSRSPIKYRRSRRSRSYSPPVRRSREQRSRSPSKSRH-SKY 547
Query: 299 DNERLSTRDTRDGADRS-RRESDISHHSPVPRRRKSRSVSPHS--RKSYRSDSGSP-KHR 354
++R S RD +D RS RRES+ S R++RS S +K R DS SP K R
Sbjct: 548 GSDR-SHRDDKDRYSRSGRRESERSRDHHSSSSRRNRSKSRSPRHKKPSRVDSRSPKKQR 606
Query: 355 QES---SARKSSRAHSKSPKRHRGNRNSPRND 383
+ES S +S+RA S+SP+ H+G+++SP D
Sbjct: 607 EESLSPSKSRSARAGSRSPRHHKGSKSSPTRD 638
>gi|413947084|gb|AFW79733.1| hypothetical protein ZEAMMB73_180978 [Zea mays]
Length = 787
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 186/332 (56%), Positives = 232/332 (69%), Gaps = 32/332 (9%)
Query: 59 KAGKADALKKTLQVSNLSPLLTVEQLRQLFSFCGTVVECTITDSKHFAYIEYSKPEEATA 118
KA +ADALK+T+Q+SNLSPLLTV+ ++QLF CG VV+CTITDSKH AY+EYSKPEEATA
Sbjct: 332 KADEADALKRTVQISNLSPLLTVDYVKQLFGLCGKVVDCTITDSKHIAYVEYSKPEEATA 391
Query: 119 ALALNNMDVGGRPLNVEMAKSFPQKPSHLNSSLAGSSLPMMMQQAVAMQQMQFQQALLMQ 178
AL NN +VGGRPLNVEMAKS P K A ++LPMMMQQA+ +QQMQFQQAL+MQ
Sbjct: 392 ALEFNNKNVGGRPLNVEMAKSLPSK--------ANNNLPMMMQQAIQLQQMQFQQALMMQ 443
Query: 179 QTLTAQQAANRAASMKSATELAAARAAEISKKLKADGLVDEDKETKQKSRSPSTSRARSR 238
Q++ QQAA RAA+MKSATE AAARAAEIS+KLKA+G ++ E K ++
Sbjct: 444 QSIATQQAAARAATMKSATEAAAARAAEISRKLKAEGFGADNMEEKH-----------AK 492
Query: 239 SKSRSPVHYQRTYRARSRSKSRSPVSFHRRRRSRSFSPPYRHRRGHRSRSPLRSRHYSKY 298
KSRSP RS+S+SRSP+ + R RRSRS+SPP R R RSRSP +SRH SKY
Sbjct: 493 GKSRSP----SPSTRRSKSRSRSPIKYRRSRRSRSYSPPVRRSREQRSRSPSKSRH-SKY 547
Query: 299 DNERLSTRDTRDGADRS-RRESDISHHSPVPRRRKSRSVSPHS--RKSYRSDSGSP-KHR 354
++R S RD +D RS RRES+ S R++RS S +K R DS SP K R
Sbjct: 548 GSDR-SHRDDKDRYSRSGRRESERSRDHHSSSSRRNRSKSRSPRHKKPSRVDSRSPKKQR 606
Query: 355 QES---SARKSSRAHSKSPKRHRGNRNSPRND 383
+ES S +S+RA S+SP+ H+G+++SP D
Sbjct: 607 EESLSPSKSRSARAGSRSPRHHKGSKSSPTRD 638
>gi|242056799|ref|XP_002457545.1| hypothetical protein SORBIDRAFT_03g009130 [Sorghum bicolor]
gi|241929520|gb|EES02665.1| hypothetical protein SORBIDRAFT_03g009130 [Sorghum bicolor]
Length = 792
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 129/195 (66%), Positives = 155/195 (79%), Gaps = 11/195 (5%)
Query: 54 SGSPDKAGKADALKKTLQVSNLSPLLTVEQLRQLFSFCGTVVECTITDSKHFAYIEYSKP 113
SGS +KA +ADALK+T+Q+SNLSP+LTV+ ++QLF CG VV+CT TDSKH AY+EYSKP
Sbjct: 328 SGSINKADEADALKRTVQISNLSPVLTVDYIKQLFGLCGKVVDCTTTDSKHIAYVEYSKP 387
Query: 114 EEATAALALNNMDVGGRPLNVEMAKSFPQKPSHLNSSLAGSSLPMMMQQAVAMQQMQFQQ 173
EEATAAL N+ +VGGRPLNVEMAKS P K A ++LPMMMQQAV +QQMQFQQ
Sbjct: 388 EEATAALEFNSKNVGGRPLNVEMAKSLPPK--------ANNNLPMMMQQAVQLQQMQFQQ 439
Query: 174 ALLMQQTLTAQQAANRAASMKSATELAAARAAEISKKLKADGLVD---EDKETKQKSRSP 230
AL+MQQ++ QQAA RAA+MKSATE AAARAAEIS+KLKA+G E K+ K KSRSP
Sbjct: 440 ALMMQQSIATQQAAARAATMKSATEAAAARAAEISRKLKAEGFGGDNIEGKDAKGKSRSP 499
Query: 231 STSRARSRSKSRSPV 245
S RS+S+SRSP+
Sbjct: 500 SPPTRRSKSRSRSPI 514
>gi|168001180|ref|XP_001753293.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695579|gb|EDQ81922.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1129
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 133/268 (49%), Positives = 166/268 (61%), Gaps = 48/268 (17%)
Query: 69 TLQVSNLSPLLTVEQLRQLFSFCGTVVECTITDSKHFAYIEYSKPEEATAALALNNMDVG 128
TL V+N++P+LT +QLRQLF++CGTVV+C +++SK AY+EYS+PE A A L+LN+M VG
Sbjct: 343 TLHVTNINPILTADQLRQLFNYCGTVVDCAMSESKTTAYVEYSRPEGAKAGLSLNDMPVG 402
Query: 129 GRPLNVEMAKSFPQKPSH-LNSSLAGSS---LPMMMQQAVAMQQMQFQQALLMQQTLTAQ 184
G+ L VE+ K P+ H S+L G LPMMMQQAV MQQMQFQQAL MQQ L Q
Sbjct: 403 GQNLKVEL-KRKPRSGKHGTGSTLNGMGPPQLPMMMQQAVVMQQMQFQQALYMQQALATQ 461
Query: 185 QAANRAASMKSATELAAARAAEISKKLKA--DGL-VDEDKETKQKSRSPSTSRARSRSKS 241
QAA RAA++KSA E+A+ARAAEISK+L DG+ V ET Q S S ARS++K
Sbjct: 462 QAAARAATVKSAAEMASARAAEISKRLAGPNDGVEVAGVPETVQTSPS-----ARSKTK- 515
Query: 242 RSPVHYQRTYRARSRSKSRSPVSFHRRRRSRSFSPP----------------YRHR-RGH 284
SRS SRSP+ +HR RRSRS +P YR R RG
Sbjct: 516 -------------SRSNSRSPIRYHRDRRSRSATPARLRRGRSRSRYRDRNLYRSRERGS 562
Query: 285 RSRSP--LRSRHYSKYDNERLSTRDTRD 310
R R S +Y++ D ER RD RD
Sbjct: 563 RYRGGRDSYSSYYTRRDWER--ERDNRD 588
>gi|147864570|emb|CAN81529.1| hypothetical protein VITISV_010597 [Vitis vinifera]
Length = 774
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 140/305 (45%), Positives = 183/305 (60%), Gaps = 39/305 (12%)
Query: 229 SPSTSRARSRSKSRSPVHYQRTYRARSRSKSRSPVSFHRRRRSRSFSPPYRHRRGHRSRS 288
SP+ S ARS+S+S+SP+HY+R R+RS S + R HRSRS
Sbjct: 355 SPTISHARSKSRSKSPLHYRRRRRSRSFSPPSR------------------YSREHRSRS 396
Query: 289 PLRSRHYSKYDNERLSTRDTRDGADRSRRESDIS---HHSPVPRRRKSRSVSPHSRKSYR 345
P RS HYS +D+ S RD +DG+DRSRR HH RR +SRS SP +RKSYR
Sbjct: 397 PFRSHHYSIHDHGSRSYRDNKDGSDRSRRRDLDRSHDHHLSSSRRNRSRSRSPRTRKSYR 456
Query: 346 SDSGSPKHRQESSA---RKSSRAHSKSPKRHRGNRNSPRNDD----AKPKYRHRSRSKSM 398
+DS SPK R ESS+ RKSSR KSP+ HRG+R+SPRNDD + + +
Sbjct: 457 ADSESPKRRVESSSHRTRKSSRVSPKSPRHHRGSRSSPRNDDDNKSKRRRRSRSKSVEGK 516
Query: 399 ERHDEEKDEARDGKSQHRERKRSRSLSREDEHH-GRGRSPAGNVDENKSKLRGRSRSVSA 457
+E+ DE RD KS+HR+R+RSRS+S E +HH G G SP + D++KSK R RSRS SA
Sbjct: 517 HYSNEKIDERRDKKSKHRDRRRSRSISAEGKHHKGSGSSPR-SFDDSKSKHRKRSRSKSA 575
Query: 458 LDKYKSSEIADDSRDDRLRNRHKRRSRSKSVEGKMGGGSR-------DKKPKHHDRRRSR 510
K S+ D+ RD++ ++ KRRSRS+S EGK +R + +PKH RR SR
Sbjct: 576 EGKRVLSDKTDEGRDEKGKHHEKRRSRSRSAEGKYCRLNRLSPKSSDEIRPKH--RRHSR 633
Query: 511 SISAD 515
S SA+
Sbjct: 634 SRSAE 638
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 96/245 (39%), Positives = 122/245 (49%), Gaps = 50/245 (20%)
Query: 400 RHDEEKDEARDGKSQHRERKRSRSLSREDEHHGRGRSPAGNVDENKSKLRGRSRSVSALD 459
R D E + R S HR RK SR + HH RS N D+NKSK R RSRS S
Sbjct: 456 RADSESPKRRVESSSHRTRKSSRVSPKSPRHHRGSRSSPRNDDDNKSKRRRRSRSKSVEG 515
Query: 460 KYKSSEIADDSRDDRLRNRHKRRSRSKSVEGKMGGGSRDKKPKHHDRRRSRSISADGKHH 519
K+ S+E D+ RD KK KH DRRRSRSISA+GKHH
Sbjct: 516 KHYSNEKIDERRD--------------------------KKSKHRDRRRSRSISAEGKHH 549
Query: 520 RGS-RSPRGLDESRTKLGRRSRSKSIERKLY-----------------RNRGRSRSADGR 561
+GS SPR D+S++K +RSRSKS E K + R RSRSA+G+
Sbjct: 550 KGSGSSPRSFDDSKSKHRKRSRSKSAEGKRVLSDKTDEGRDEKGKHHEKRRSRSRSAEGK 609
Query: 562 R-RKSMLSPANLDRSESNRRRHSASQSKDHANSESAETRDYKSMHHPHNWDKTEGELNAS 620
R + LSP + D RRHS S+S ++ S++ D K MHH + E E+
Sbjct: 610 YCRLNRLSPKSSDEIRPKHRRHSRSRSAEYRRSDNKG--DEKLMHHK---EPKEREVTED 664
Query: 621 LKDPT 625
LK+P+
Sbjct: 665 LKEPS 669
>gi|168005578|ref|XP_001755487.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693194|gb|EDQ79547.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1390
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 91/154 (59%), Positives = 119/154 (77%), Gaps = 7/154 (4%)
Query: 69 TLQVSNLSPLLTVEQLRQLFSFCGTVVECTITDSKHFAYIEYSKPEEATAALALNNMDVG 128
TLQV+N++P+LT +QLRQLF++CGTV++CT+++SK A++EYS+PE A A L+LN+M VG
Sbjct: 362 TLQVTNINPILTADQLRQLFNYCGTVIDCTMSESKTTAFVEYSRPEGAKAGLSLNDMPVG 421
Query: 129 GRPLNVEMAKSFPQKPSH-LNSSLAGSS---LPMMMQQAVAMQQMQFQQALLMQQTLTAQ 184
G+ L VE+ + P+ H S+L G LPMMMQQAV MQQMQFQQAL MQQ L Q
Sbjct: 422 GQNLKVELKRK-PRSGKHGTGSTLNGMGPPQLPMMMQQAVVMQQMQFQQALYMQQALATQ 480
Query: 185 QAANRAASMKSATELAAARAAEISKKLKA--DGL 216
QAA RAA++KSA E+A+ARAAEISK+L DG+
Sbjct: 481 QAAARAATVKSAAEMASARAAEISKRLAGPNDGV 514
>gi|303284403|ref|XP_003061492.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456822|gb|EEH54122.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 525
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 53/75 (70%)
Query: 66 LKKTLQVSNLSPLLTVEQLRQLFSFCGTVVECTITDSKHFAYIEYSKPEEATAALALNNM 125
L+KTL V NL+P +TVEQLR +F+FCG V +C I + K F ++EY+ E+A A L LN +
Sbjct: 177 LQKTLHVGNLAPGVTVEQLRTIFAFCGVVTDCRIANEKAFGFVEYATHEQALAGLGLNGL 236
Query: 126 DVGGRPLNVEMAKSF 140
+ RPL VEM+K+
Sbjct: 237 ALEDRPLRVEMSKTV 251
>gi|308809515|ref|XP_003082067.1| RNA recognition motif (ISS) [Ostreococcus tauri]
gi|116060534|emb|CAL55870.1| RNA recognition motif (ISS) [Ostreococcus tauri]
Length = 412
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 57/75 (76%), Gaps = 1/75 (1%)
Query: 66 LKKTLQVSNLSPLLTVEQLRQLFSFCGTVVECTITDS-KHFAYIEYSKPEEATAALALNN 124
L++T VSN LTVEQ++QLFSFCGT+VEC S K+FA+IE+ +EA AALALN
Sbjct: 283 LRRTAHVSNYPSALTVEQVKQLFSFCGTIVECREGPSGKNFAFIEFESNKEALAALALNG 342
Query: 125 MDVGGRPLNVEMAKS 139
M+VGGR + VE+AK+
Sbjct: 343 MNVGGRNIRVELAKT 357
>gi|384250122|gb|EIE23602.1| hypothetical protein COCSUDRAFT_63130 [Coccomyxa subellipsoidea
C-169]
Length = 504
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 67/119 (56%), Gaps = 19/119 (15%)
Query: 25 MAAAQAIVAAQ-----ALQAHAAQVQAQQSAKDLSGSPDKAGKADALKKTLQVSNLSPLL 79
M+ A A +A Q QAH A V+ P +AG D TL V NL+P +
Sbjct: 1 MSTANAALATQPPSVLGPQAHEAGVE----------FPTEAGVLDC---TLLVGNLNPSV 47
Query: 80 TVEQLRQLFSFCGTVVECTITDSKH-FAYIEYSKPEEATAALALNNMDVGGRPLNVEMA 137
TV+Q+RQLF+FCG++ ++ +K+ FA +EY+ P EA AA A+N M V R + VE A
Sbjct: 48 TVDQIRQLFAFCGSITNVSLVGNKNQFALVEYATPGEAAAASAMNGMQVMDRAIAVEQA 106
>gi|145352361|ref|XP_001420518.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580752|gb|ABO98811.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 223
Score = 73.9 bits (180), Expect = 3e-10, Method: Composition-based stats.
Identities = 39/77 (50%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Query: 64 DALKKTLQVSNLSPLLTVEQLRQLFSFCGTVVECTITD-SKHFAYIEYSKPEEATAALAL 122
+ L++T VSN LT EQ++QLFSFCG++ EC K+F +IE+ +EA AA AL
Sbjct: 94 EELRRTAHVSNYPVGLTTEQVKQLFSFCGSIAECREGGPGKNFCFIEFESNKEALAACAL 153
Query: 123 NNMDVGGRPLNVEMAKS 139
N M VGGR L VE+AK+
Sbjct: 154 NGMQVGGRNLRVELAKT 170
>gi|302800393|ref|XP_002981954.1| hypothetical protein SELMODRAFT_445013 [Selaginella moellendorffii]
gi|300150396|gb|EFJ17047.1| hypothetical protein SELMODRAFT_445013 [Selaginella moellendorffii]
Length = 403
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/133 (48%), Positives = 80/133 (60%), Gaps = 20/133 (15%)
Query: 162 QAVAMQQMQFQQALLMQQTLTAQQAANRAASMKSATELAAARAAEISKKLKADGLVDEDK 221
QA+A QQ QFQQAL++QQ + +QQAA RAA++K A++LA ARAA ISK+LK+D D+
Sbjct: 41 QAIAKQQFQFQQALMVQQMMASQQAAVRAANLKVASDLAVARAALISKQLKSDDPSAGDE 100
Query: 222 ETKQKSRSPSTSRARSRSKSR-SPVHYQRTYRARSRSKSRSPVSFHRRRRSRSFSPPYRH 280
E K A SKS+ SP SRS+SRSP H RR SPP RH
Sbjct: 101 EEK----------AADASKSKQSP-----DSFRSSRSRSRSPARHHHRRN----SPPPRH 141
Query: 281 RRGHRSRSPLRSR 293
RR S SP+R R
Sbjct: 142 RRRSLSGSPVRYR 154
>gi|255086607|ref|XP_002509270.1| predicted protein [Micromonas sp. RCC299]
gi|226524548|gb|ACO70528.1| predicted protein [Micromonas sp. RCC299]
Length = 588
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 59/122 (48%), Gaps = 6/122 (4%)
Query: 18 MAPSAAAMAAAQAIVAAQALQAHAAQVQAQQSAKDLSGSPDKAGKADALKKTLQVSNLSP 77
M PSA + +V Q+ AA A+ +P++A ++ + V NL+
Sbjct: 115 MRPSAVPV---PGVVPGAVPQSGAAPTDVPSPAQTPELNPEEAA---SVSTQVHVGNLTH 168
Query: 78 LLTVEQLRQLFSFCGTVVECTITDSKHFAYIEYSKPEEATAALALNNMDVGGRPLNVEMA 137
+T QL QLFS CG V I K F ++E + PE+A AL LN M + GR L VE
Sbjct: 169 NVTTTQLAQLFSHCGEVRGARIAHGKQFGFVEMATPEQAKKALGLNGMPLDGRVLRVEAC 228
Query: 138 KS 139
S
Sbjct: 229 NS 230
>gi|307109000|gb|EFN57239.1| expressed protein [Chlorella variabilis]
Length = 557
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 74 NLSPLLTVEQLRQLFSFCGTVVECTITDSK-HFAYIEYSKPEEATAALALNNMDVGGRPL 132
NL+ + + L+ +F+FCG++ CT+ + A++E+ P+EATAALA++ + + G+PL
Sbjct: 314 NLATGVQISLLKSVFAFCGSIRGCTLAGANTGCAFLEFGSPQEATAALAMSGVSLMGQPL 373
Query: 133 NVEM 136
VE+
Sbjct: 374 KVEL 377
>gi|340385705|ref|XP_003391349.1| PREDICTED: hypothetical protein LOC100639209, partial [Amphimedon
queenslandica]
Length = 358
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 59/124 (47%), Gaps = 7/124 (5%)
Query: 25 MAAAQAIVAAQALQAHAAQVQAQQSAKDLSGSPDKAGKADALKKTLQVSNLSPLLTVEQL 84
+AA + Q+ AA V S ++G+ D + K D +++T+ V NLS L +Q+
Sbjct: 3 FSAADSPTGGSTGQSAAAPVLP--SMPPITGNVDPS-KIDEIRRTIYVGNLSSTLHADQV 59
Query: 85 RQLFSFCGTVVECTI----TDSKHFAYIEYSKPEEATAALALNNMDVGGRPLNVEMAKSF 140
F CG + + T FA++E++ PE AL N G RP+ V +K+
Sbjct: 60 MNFFQTCGEIKYVRMAGDETQPTRFAFVEFANPESVQVALQYNGAMFGDRPIKVNHSKNA 119
Query: 141 PQKP 144
KP
Sbjct: 120 IVKP 123
>gi|340383093|ref|XP_003390052.1| PREDICTED: hypothetical protein LOC100637518 [Amphimedon
queenslandica]
Length = 428
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 68/146 (46%), Gaps = 14/146 (9%)
Query: 3 ALAATTTMGTLSQVPMAPSAAAMAAAQAIVAAQALQAHAAQVQAQQSAKDLSGSPDKAGK 62
A+A++ T SQ P + AA + Q+ AA V S ++G+ D + K
Sbjct: 56 AVASSITANIQSQDPFS-------AADSPTGGSTGQSAAAPVLP--SMPPITGNVDPS-K 105
Query: 63 ADALKKTLQVSNLSPLLTVEQLRQLFSFCGTVVECTI----TDSKHFAYIEYSKPEEATA 118
D +++T+ V NLS L +Q+ F CG + + T FA++E++ PE
Sbjct: 106 IDEIRRTIYVGNLSSTLHADQVMNFFQTCGEIKYVRMAGDETQPTRFAFVEFANPESVQV 165
Query: 119 ALALNNMDVGGRPLNVEMAKSFPQKP 144
AL N G RP+ V +K+ KP
Sbjct: 166 ALQYNGAMFGDRPIKVNHSKNAIVKP 191
>gi|302802355|ref|XP_002982933.1| hypothetical protein SELMODRAFT_422241 [Selaginella moellendorffii]
gi|300149523|gb|EFJ16178.1| hypothetical protein SELMODRAFT_422241 [Selaginella moellendorffii]
Length = 349
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/118 (45%), Positives = 70/118 (59%), Gaps = 18/118 (15%)
Query: 176 LMQQTLTAQQAANRAASMKSATELAAARAAEISKKLKADGLVDEDKETKQKSRSPSTSRA 235
++QQ + +QQAA RAA++K A++LA ARAA ISK+LK+D D+E K + A
Sbjct: 1 MVQQMMASQQAAVRAANLKVASDLAVARAALISKQLKSDDPSAGDEEEK--------AAA 52
Query: 236 RSRSKSRSPVHYQRTYRARSRSKSRSPVSFHRRRRSRSFSPPYRHRRGHRSRSPLRSR 293
S+SK +SP SRS+SRSP H RR SPP RHRR S SP+R R
Sbjct: 53 ASKSK-QSP-----DSFRSSRSRSRSPARHHHRRN----SPPPRHRRRSLSGSPVRYR 100
>gi|426384534|ref|XP_004058817.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 4 [Gorilla gorilla gorilla]
Length = 509
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 70/152 (46%), Gaps = 8/152 (5%)
Query: 17 PMAPSAAAMAAAQAIVAAQALQAHAAQVQAQQSAKDLSGSPDKAGKADALKKTLQVSNL- 75
P+ ++++ AI AA AL + A + + L G+ D + K D +++T+ V NL
Sbjct: 18 PLTTLGVSLSSLGAIPAA-ALDPNIATL-GEIPQPPLMGNVDPS-KIDEIRRTVYVGNLN 74
Query: 76 SPLLTVEQLRQLFSFCGTVVECTI----TDSKHFAYIEYSKPEEATAALALNNMDVGGRP 131
S T +QL + F G V + T FA++E++ ALA N + G RP
Sbjct: 75 SQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRP 134
Query: 132 LNVEMAKSFPQKPSHLNSSLAGSSLPMMMQQA 163
L + + + KP + A L +M++
Sbjct: 135 LKINHSNNAIVKPPEMTPQAAAKELEEVMKRV 166
>gi|441658628|ref|XP_004091274.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
[Nomascus leucogenys]
Length = 509
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 70/152 (46%), Gaps = 8/152 (5%)
Query: 17 PMAPSAAAMAAAQAIVAAQALQAHAAQVQAQQSAKDLSGSPDKAGKADALKKTLQVSNL- 75
P+ ++++ AI AA AL + A + + L G+ D + K D +++T+ V NL
Sbjct: 18 PLTTLGVSLSSLGAIPAA-ALDPNIATL-GEIPQPPLMGNVDPS-KIDEIRRTVYVGNLN 74
Query: 76 SPLLTVEQLRQLFSFCGTVVECTI----TDSKHFAYIEYSKPEEATAALALNNMDVGGRP 131
S T +QL + F G V + T FA++E++ ALA N + G RP
Sbjct: 75 SQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRP 134
Query: 132 LNVEMAKSFPQKPSHLNSSLAGSSLPMMMQQA 163
L + + + KP + A L +M++
Sbjct: 135 LKINHSNNAIVKPPEMTPQAAAKELEEVMKRV 166
>gi|410948711|ref|XP_003981074.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 2 [Felis catus]
Length = 510
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 70/152 (46%), Gaps = 8/152 (5%)
Query: 17 PMAPSAAAMAAAQAIVAAQALQAHAAQVQAQQSAKDLSGSPDKAGKADALKKTLQVSNL- 75
P+ ++++ AI AA AL + A + + L G+ D + K D +++T+ V NL
Sbjct: 18 PLTTLGVSLSSLGAIPAA-ALDPNIATL-GEIPQPPLMGNVDPS-KIDEIRRTVYVGNLN 74
Query: 76 SPLLTVEQLRQLFSFCGTVVECTI----TDSKHFAYIEYSKPEEATAALALNNMDVGGRP 131
S T +QL + F G V + T FA++E++ ALA N + G RP
Sbjct: 75 SQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRP 134
Query: 132 LNVEMAKSFPQKPSHLNSSLAGSSLPMMMQQA 163
L + + + KP + A L +M++
Sbjct: 135 LKINHSNNAIVKPPEMTPQAAAKELEEVMKRV 166
>gi|410948713|ref|XP_003981075.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 3 [Felis catus]
Length = 509
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 70/152 (46%), Gaps = 8/152 (5%)
Query: 17 PMAPSAAAMAAAQAIVAAQALQAHAAQVQAQQSAKDLSGSPDKAGKADALKKTLQVSNL- 75
P+ ++++ AI AA AL + A + + L G+ D + K D +++T+ V NL
Sbjct: 18 PLTTLGVSLSSLGAIPAA-ALDPNIATL-GEIPQPPLMGNVDPS-KIDEIRRTVYVGNLN 74
Query: 76 SPLLTVEQLRQLFSFCGTVVECTI----TDSKHFAYIEYSKPEEATAALALNNMDVGGRP 131
S T +QL + F G V + T FA++E++ ALA N + G RP
Sbjct: 75 SQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRP 134
Query: 132 LNVEMAKSFPQKPSHLNSSLAGSSLPMMMQQA 163
L + + + KP + A L +M++
Sbjct: 135 LKINHSNNAIVKPPEMTPQAAAKELEEVMKRV 166
>gi|440801206|gb|ELR22227.1| RNAbinding protein, putative [Acanthamoeba castellanii str. Neff]
Length = 533
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Query: 61 GKADALKKTLQVSNLSPLLTVEQLRQLFSFCGTVVE---CTITDSKH--FAYIEYSKPEE 115
G D + T+ V+ + L E + QLFS CGTV C T++K FA++E+S E
Sbjct: 156 GSNDRVACTVYVTGVDTQLREEHVIQLFSLCGTVTNIRMCGETENKATRFAFVEFSTRES 215
Query: 116 ATAALALNNMDVGGRPLNVEMAKSFPQKPS 145
A A+ L N+ +G P+ V +K+ Q S
Sbjct: 216 ALMAMGLTNIVLGNAPIKVMPSKTAIQAGS 245
Score = 46.2 bits (108), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 68 KTLQVSNLSPLLTVEQLRQLFSFCGTVVEC-----TITDSKHFAYIEYSKPEEATAALAL 122
+TL V + L+ +L Q+FS GTV + T FA++E+S EA ALA+
Sbjct: 280 RTLYVGGVDSNLSEAELLQMFSGFGTVTKLAMAGDTTVHQARFAFVEFSTVAEAHMALAM 339
Query: 123 NNMDVGGRPLNVEMAKS 139
N VG RP+ V +K+
Sbjct: 340 NGTVVGERPIRVSQSKT 356
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 59 KAGKADAL-KKTLQVSNLSPLLTVEQLRQLFSFCGTVVECTITD----SKHFAYIEYSKP 113
+ G AL ++T+ V + L E L FS C T+++ + S F +IE++ P
Sbjct: 4 QGGGGGALEQRTVYVGCIPSNLNSETLGHFFSTCDTIIQIRLAGDPSYSTRFGFIEFATP 63
Query: 114 EEATAALALNNMDVGGRPLNVEMAKS 139
E A A +N +++ G+ L + ++K+
Sbjct: 64 EGAQRACNMNGVELDGKKLRITLSKT 89
>gi|294909807|ref|XP_002777856.1| splicing factor, putative [Perkinsus marinus ATCC 50983]
gi|239885818|gb|EER09651.1| splicing factor, putative [Perkinsus marinus ATCC 50983]
Length = 360
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query: 67 KKTLQVSNLSPLLTVEQLRQLFSFCGTVVECTITDSKHFAYIEYSKPEEATAAL-ALNNM 125
+ TL V N+S T ++ F G V+ C I K+ ++EY +A A + +
Sbjct: 4 RNTLYVGNISSRTTERDIKDEFGRYGRVIRCYIPPGKNICFVEYDDERDAEDAYRGMASA 63
Query: 126 DVGGRPLNVEMAKSFPQ 142
V G LN++ AK+ P+
Sbjct: 64 RVDGNTLNLQWAKAGPR 80
>gi|328769388|gb|EGF79432.1| hypothetical protein BATDEDRAFT_35374 [Batrachochytrium
dendrobatidis JAM81]
Length = 555
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 56/109 (51%), Gaps = 4/109 (3%)
Query: 64 DALKKTLQVSNLSPLLTVEQLRQLFSFCGTVVECTI----TDSKHFAYIEYSKPEEATAA 119
D++ +T+ N+ L+ +++ LFS CG V + + T S +A+IE++ E A A
Sbjct: 139 DSVDRTIYTGNIHSGLSQQEVSMLFSSCGDVTQVKMAGDATHSTRYAFIEFATSESAAMA 198
Query: 120 LALNNMDVGGRPLNVEMAKSFPQKPSHLNSSLAGSSLPMMMQQAVAMQQ 168
L L+ M V GR + V +K +P + + M+M+QA+ Q
Sbjct: 199 LNLHGMMVAGRAIKVNRSKHSIGRPIGMYPGMFRPDTDMVMKQAMQAQM 247
>gi|114599978|ref|XP_001162417.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 3 [Pan troglodytes]
Length = 510
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 70/152 (46%), Gaps = 8/152 (5%)
Query: 17 PMAPSAAAMAAAQAIVAAQALQAHAAQVQAQQSAKDLSGSPDKAGKADALKKTLQVSNL- 75
P+ ++++ AI AA AL + A + + L G+ D + K D +++T+ V NL
Sbjct: 18 PLTTLGVSLSSLGAIPAA-ALDPNIATL-GEIPQPPLMGNVDPS-KIDEIRRTVYVGNLN 74
Query: 76 SPLLTVEQLRQLFSFCGTVVECTI----TDSKHFAYIEYSKPEEATAALALNNMDVGGRP 131
S T +QL + F G V + T FA++E++ ALA N + G RP
Sbjct: 75 SQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRP 134
Query: 132 LNVEMAKSFPQKPSHLNSSLAGSSLPMMMQQA 163
L + + + KP + A L +M++
Sbjct: 135 LKINHSNNAIVKPPEMTPQAAAKELEEVMKRV 166
>gi|426384530|ref|XP_004058815.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 2 [Gorilla gorilla gorilla]
gi|426384532|ref|XP_004058816.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 3 [Gorilla gorilla gorilla]
Length = 510
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 70/152 (46%), Gaps = 8/152 (5%)
Query: 17 PMAPSAAAMAAAQAIVAAQALQAHAAQVQAQQSAKDLSGSPDKAGKADALKKTLQVSNL- 75
P+ ++++ AI AA AL + A + + L G+ D + K D +++T+ V NL
Sbjct: 18 PLTTLGVSLSSLGAIPAA-ALDPNIATL-GEIPQPPLMGNVDPS-KIDEIRRTVYVGNLN 74
Query: 76 SPLLTVEQLRQLFSFCGTVVECTI----TDSKHFAYIEYSKPEEATAALALNNMDVGGRP 131
S T +QL + F G V + T FA++E++ ALA N + G RP
Sbjct: 75 SQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRP 134
Query: 132 LNVEMAKSFPQKPSHLNSSLAGSSLPMMMQQA 163
L + + + KP + A L +M++
Sbjct: 135 LKINHSNNAIVKPPEMTPQAAAKELEEVMKRV 166
>gi|67968786|dbj|BAE00750.1| unnamed protein product [Macaca fascicularis]
Length = 510
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 70/152 (46%), Gaps = 8/152 (5%)
Query: 17 PMAPSAAAMAAAQAIVAAQALQAHAAQVQAQQSAKDLSGSPDKAGKADALKKTLQVSNL- 75
P+ ++++ AI AA AL + A + + L G+ D + K D +++T+ V NL
Sbjct: 18 PLTTLGVSLSSLGAIPAA-ALDPNIATL-GEIPQPPLMGNVDPS-KIDEIRRTVYVGNLN 74
Query: 76 SPLLTVEQLRQLFSFCGTVVECTI----TDSKHFAYIEYSKPEEATAALALNNMDVGGRP 131
S T +QL + F G V + T FA++E++ ALA N + G RP
Sbjct: 75 SQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRP 134
Query: 132 LNVEMAKSFPQKPSHLNSSLAGSSLPMMMQQA 163
L + + + KP + A L +M++
Sbjct: 135 LKINHSNNAIVKPPEMTPQAAAKELEEVMKRV 166
>gi|21040255|ref|NP_631907.1| splicing regulatory glutamine/lysine-rich protein 1 isoform b [Homo
sapiens]
gi|37537968|sp|Q8WXA9.1|SREK1_HUMAN RecName: Full=Splicing regulatory glutamine/lysine-rich protein 1;
AltName: Full=Serine/arginine-rich-splicing regulatory
protein 86; Short=SRrp86; AltName: Full=Splicing factor,
arginine/serine-rich 12; AltName: Full=Splicing
regulatory protein 508; Short=SRrp508
gi|18307966|gb|AAL67778.1|AF459094_1 splicing factor, arginine/serine-rich 12 [Homo sapiens]
gi|85662678|gb|AAI12344.1| SFRS12 protein [Homo sapiens]
gi|119571715|gb|EAW51330.1| splicing factor, arginine/serine-rich 12, isoform CRA_c [Homo
sapiens]
gi|127801393|gb|AAH67770.1| Splicing factor, arginine/serine-rich 12 [Homo sapiens]
Length = 508
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 70/152 (46%), Gaps = 8/152 (5%)
Query: 17 PMAPSAAAMAAAQAIVAAQALQAHAAQVQAQQSAKDLSGSPDKAGKADALKKTLQVSNL- 75
P+ ++++ AI AA AL + A + + L G+ D + K D +++T+ V NL
Sbjct: 18 PLTTLGVSLSSLGAIPAA-ALDPNIATL-GEIPQPPLMGNVDPS-KIDEIRRTVYVGNLN 74
Query: 76 SPLLTVEQLRQLFSFCGTVVECTI----TDSKHFAYIEYSKPEEATAALALNNMDVGGRP 131
S T +QL + F G V + T FA++E++ ALA N + G RP
Sbjct: 75 SQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRP 134
Query: 132 LNVEMAKSFPQKPSHLNSSLAGSSLPMMMQQA 163
L + + + KP + A L +M++
Sbjct: 135 LKINHSNNAIVKPPEMTPQAAAKELEEVMKRV 166
>gi|426246385|ref|XP_004016975.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 4 [Ovis aries]
Length = 515
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 70/152 (46%), Gaps = 8/152 (5%)
Query: 17 PMAPSAAAMAAAQAIVAAQALQAHAAQVQAQQSAKDLSGSPDKAGKADALKKTLQVSNL- 75
P+ ++++ AI AA AL + A + + L G+ D + K D +++T+ V NL
Sbjct: 18 PLTTLGVSLSSLGAIPAA-ALDPNIATL-GEIPQPPLMGNVDPS-KIDEIRRTVYVGNLN 74
Query: 76 SPLLTVEQLRQLFSFCGTVVECTI----TDSKHFAYIEYSKPEEATAALALNNMDVGGRP 131
S T +QL + F G V + T FA++E++ ALA N + G RP
Sbjct: 75 SQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRP 134
Query: 132 LNVEMAKSFPQKPSHLNSSLAGSSLPMMMQQA 163
L + + + KP + A L +M++
Sbjct: 135 LKINHSNNAIVKPPEMTPQAAAKELEEVMKRV 166
>gi|332233720|ref|XP_003266051.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 2 [Nomascus leucogenys]
gi|441658625|ref|XP_004091273.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
[Nomascus leucogenys]
Length = 510
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 70/152 (46%), Gaps = 8/152 (5%)
Query: 17 PMAPSAAAMAAAQAIVAAQALQAHAAQVQAQQSAKDLSGSPDKAGKADALKKTLQVSNL- 75
P+ ++++ AI AA AL + A + + L G+ D + K D +++T+ V NL
Sbjct: 18 PLTTLGVSLSSLGAIPAA-ALDPNIATL-GEIPQPPLMGNVDPS-KIDEIRRTVYVGNLN 74
Query: 76 SPLLTVEQLRQLFSFCGTVVECTI----TDSKHFAYIEYSKPEEATAALALNNMDVGGRP 131
S T +QL + F G V + T FA++E++ ALA N + G RP
Sbjct: 75 SQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRP 134
Query: 132 LNVEMAKSFPQKPSHLNSSLAGSSLPMMMQQA 163
L + + + KP + A L +M++
Sbjct: 135 LKINHSNNAIVKPPEMTPQAAAKELEEVMKRV 166
>gi|338718814|ref|XP_003363893.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 2 [Equus caballus]
Length = 512
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 70/152 (46%), Gaps = 8/152 (5%)
Query: 17 PMAPSAAAMAAAQAIVAAQALQAHAAQVQAQQSAKDLSGSPDKAGKADALKKTLQVSNL- 75
P+ ++++ AI AA AL + A + + L G+ D + K D +++T+ V NL
Sbjct: 18 PLTTLGVSLSSLGAIPAA-ALDPNIATL-GEIPQPPLMGNVDPS-KIDEIRRTVYVGNLN 74
Query: 76 SPLLTVEQLRQLFSFCGTVVECTI----TDSKHFAYIEYSKPEEATAALALNNMDVGGRP 131
S T +QL + F G V + T FA++E++ ALA N + G RP
Sbjct: 75 SQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRP 134
Query: 132 LNVEMAKSFPQKPSHLNSSLAGSSLPMMMQQA 163
L + + + KP + A L +M++
Sbjct: 135 LKINHSNNAIVKPPEMTPQAAAKELEEVMKRV 166
>gi|426246381|ref|XP_004016973.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 2 [Ovis aries]
gi|426246383|ref|XP_004016974.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 3 [Ovis aries]
Length = 516
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 70/152 (46%), Gaps = 8/152 (5%)
Query: 17 PMAPSAAAMAAAQAIVAAQALQAHAAQVQAQQSAKDLSGSPDKAGKADALKKTLQVSNL- 75
P+ ++++ AI AA AL + A + + L G+ D + K D +++T+ V NL
Sbjct: 18 PLTTLGVSLSSLGAIPAA-ALDPNIATL-GEIPQPPLMGNVDPS-KIDEIRRTVYVGNLN 74
Query: 76 SPLLTVEQLRQLFSFCGTVVECTI----TDSKHFAYIEYSKPEEATAALALNNMDVGGRP 131
S T +QL + F G V + T FA++E++ ALA N + G RP
Sbjct: 75 SQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRP 134
Query: 132 LNVEMAKSFPQKPSHLNSSLAGSSLPMMMQQA 163
L + + + KP + A L +M++
Sbjct: 135 LKINHSNNAIVKPPEMTPQAAAKELEEVMKRV 166
>gi|440908499|gb|ELR58509.1| Splicing factor, arginine/serine-rich 12, partial [Bos grunniens
mutus]
Length = 534
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 18/178 (10%)
Query: 1 MTALAATTTMGTL----------SQVPMAPSAAAMAAAQAIVAAQALQAHAAQVQAQQSA 50
++ LA TM +L + P+ ++++ AI AA AL + A + +
Sbjct: 10 LSLLAPAPTMTSLMPGAGLLPIPTPNPLTTLGVSLSSLGAIPAA-ALDPNIATL-GEIPQ 67
Query: 51 KDLSGSPDKAGKADALKKTLQVSNL-SPLLTVEQLRQLFSFCGTVVECTI----TDSKHF 105
L G+ D + K D +++T+ V NL S T +QL + F G V + T F
Sbjct: 68 PPLMGNVDPS-KIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRF 126
Query: 106 AYIEYSKPEEATAALALNNMDVGGRPLNVEMAKSFPQKPSHLNSSLAGSSLPMMMQQA 163
A++E++ ALA N + G RPL + + + KP + A L +M++
Sbjct: 127 AFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAAKELEEVMKRV 184
>gi|126317239|ref|XP_001381458.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1-like
[Monodelphis domestica]
Length = 613
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 80/178 (44%), Gaps = 18/178 (10%)
Query: 1 MTALAATTTMGTL----------SQVPMAPSAAAMAAAQAIVAAQALQAHAAQVQAQQSA 50
++ LA TM +L + P+ + ++++ AI AA AL + A + +
Sbjct: 108 LSLLAPAPTMTSLMPGAGLLPIPTPNPLTTLSVSLSSLGAIPAA-ALDPNLATL-GEIPQ 165
Query: 51 KDLSGSPDKAGKADALKKTLQVSNL-SPLLTVEQLRQLFSFCGTVVECTI----TDSKHF 105
L G+ D + K D +++T+ V NL S T +QL + F G V + T F
Sbjct: 166 PPLMGNVDPS-KIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRF 224
Query: 106 AYIEYSKPEEATAALALNNMDVGGRPLNVEMAKSFPQKPSHLNSSLAGSSLPMMMQQA 163
A++E++ ALA N + G RPL + + + KP + A L +M++
Sbjct: 225 AFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAAKELEEVMKRV 282
>gi|57525681|ref|NP_001003613.1| splicing regulatory glutamine/lysine-rich protein 1 [Danio rerio]
gi|50417233|gb|AAH78219.1| Zgc:100974 [Danio rerio]
Length = 512
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 75/170 (44%), Gaps = 10/170 (5%)
Query: 2 TALAATTTMGTLSQVPMAPSAA---AMAAAQAIVAAQALQAHAAQVQAQQSAKDLSGSPD 58
T +A + G L +P +PS ++ A V +L A + A + L G+ D
Sbjct: 101 TPVANLMSGGGLLPIP-SPSTLQNRSLPLANLGVLKSSLDTSVATLSAVSAQPPLMGNVD 159
Query: 59 KAGKADALKKTLQVSNL-SPLLTVEQLRQLFSFCGTVVECTI----TDSKHFAYIEYSKP 113
+ K D +++T+ V NL S T +QL + F G V + T FA++E++
Sbjct: 160 PS-KVDEIRRTVYVGNLNSQSTTADQLLKFFKQVGDVKFVRMAGDETQPTRFAFVEFADQ 218
Query: 114 EEATAALALNNMDVGGRPLNVEMAKSFPQKPSHLNSSLAGSSLPMMMQQA 163
+ AL N + G RPL + + + KP L A L +M++
Sbjct: 219 DSVARALTYNGVMFGDRPLKINHSNNAIVKPPELTPQAAAKELEDVMKKV 268
>gi|296194448|ref|XP_002744950.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1-like
[Callithrix jacchus]
Length = 630
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 18/178 (10%)
Query: 1 MTALAATTTMGTL----------SQVPMAPSAAAMAAAQAIVAAQALQAHAAQVQAQQSA 50
++ LA TM +L + P+ ++++ AI AA AL + A + +
Sbjct: 108 LSLLAPAPTMTSLMPGAGLLPIPTPNPLTTLGVSLSSLGAIPAA-ALDPNIATL-GEIPQ 165
Query: 51 KDLSGSPDKAGKADALKKTLQVSNL-SPLLTVEQLRQLFSFCGTVVECTI----TDSKHF 105
L G+ D + K D +++T+ V NL S T +QL + F G V + T F
Sbjct: 166 PPLMGNVDPS-KIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRF 224
Query: 106 AYIEYSKPEEATAALALNNMDVGGRPLNVEMAKSFPQKPSHLNSSLAGSSLPMMMQQA 163
A++E++ ALA N + G RPL + + + KP + A L +M++
Sbjct: 225 AFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAAKELEEVMKRV 282
>gi|403267427|ref|XP_003925834.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
[Saimiri boliviensis boliviensis]
Length = 630
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 18/178 (10%)
Query: 1 MTALAATTTMGTL----------SQVPMAPSAAAMAAAQAIVAAQALQAHAAQVQAQQSA 50
++ LA TM +L + P+ ++++ AI AA AL + A + +
Sbjct: 108 LSLLAPAPTMTSLMPGAGLLPIPTPNPLTTLGVSLSSLGAIPAA-ALDPNIATL-GEIPQ 165
Query: 51 KDLSGSPDKAGKADALKKTLQVSNL-SPLLTVEQLRQLFSFCGTVVECTI----TDSKHF 105
L G+ D + K D +++T+ V NL S T +QL + F G V + T F
Sbjct: 166 PPLMGNVDPS-KIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRF 224
Query: 106 AYIEYSKPEEATAALALNNMDVGGRPLNVEMAKSFPQKPSHLNSSLAGSSLPMMMQQA 163
A++E++ ALA N + G RPL + + + KP + A L +M++
Sbjct: 225 AFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAAKELEEVMKRV 282
>gi|410929297|ref|XP_003978036.1| PREDICTED: uncharacterized protein LOC101067881 [Takifugu rubripes]
Length = 451
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 67/160 (41%), Gaps = 15/160 (9%)
Query: 19 APSAAAMAAAQAIVAAQALQAHAAQVQAQQSAK-DLSGS----PDKAG-----KADALKK 68
PS I A LQ V + SA DL+ S P G K D +++
Sbjct: 106 VPSLIPSGGLLPIPAPNPLQNLNLPVVNRMSASLDLAASVSSQPPLMGNVDPTKVDEIRR 165
Query: 69 TLQVSNL-SPLLTVEQLRQLFSFCGTVVECTI----TDSKHFAYIEYSKPEEATAALALN 123
T+ V NL S T +QL + F G+V + T FA++E+S+ E AL N
Sbjct: 166 TVYVGNLNSQTTTADQLLEFFRQVGSVKFVRMAGDETQPTRFAFVEFSEQESVARALTFN 225
Query: 124 NMDVGGRPLNVEMAKSFPQKPSHLNSSLAGSSLPMMMQQA 163
+ G RPL + + + KP L A L +M++
Sbjct: 226 GVMFGDRPLKINHSNNAIVKPPELTPQAAAKELESVMKRV 265
>gi|301609359|ref|XP_002934235.1| PREDICTED: hypothetical protein LOC100329115 [Xenopus (Silurana)
tropicalis]
Length = 566
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 68/161 (42%), Gaps = 12/161 (7%)
Query: 8 TTMGTLSQVPMAPSAAAMAAAQAIVAAQALQAHAAQVQAQQSAKDLSGSPDKAGKADALK 67
T++G P+ P +A + A+ A A Q L G+ D K D ++
Sbjct: 149 TSLGVNLPTPLEPVITTLAPVLPALTP-AIPAVADLPQP-----PLMGNVDPT-KVDEIR 201
Query: 68 KTLQVSNL-SPLLTVEQLRQLFSFCGTVVECTI----TDSKHFAYIEYSKPEEATAALAL 122
+T+ V NL S T EQL + F G V + T FA++E+S T AL
Sbjct: 202 RTIYVGNLNSQTTTAEQLLEFFKQVGDVRFVRMAGDETQPTRFAFVEFSDQNSVTRALTF 261
Query: 123 NNMDVGGRPLNVEMAKSFPQKPSHLNSSLAGSSLPMMMQQA 163
N + G RPL + + + KP + A L +M++
Sbjct: 262 NGVMFGDRPLKINHSNNAIVKPPEMTPQAAAKELEEVMKRV 302
>gi|410948709|ref|XP_003981073.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 1 [Felis catus]
Length = 626
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 18/178 (10%)
Query: 1 MTALAATTTMGTL----------SQVPMAPSAAAMAAAQAIVAAQALQAHAAQVQAQQSA 50
++ LA TM +L + P+ ++++ AI AA AL + A + +
Sbjct: 108 LSLLAPAPTMTSLMPGAGLLPIPTPNPLTTLGVSLSSLGAIPAA-ALDPNIATL-GEIPQ 165
Query: 51 KDLSGSPDKAGKADALKKTLQVSNL-SPLLTVEQLRQLFSFCGTVVECTI----TDSKHF 105
L G+ D + K D +++T+ V NL S T +QL + F G V + T F
Sbjct: 166 PPLMGNVDPS-KIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRF 224
Query: 106 AYIEYSKPEEATAALALNNMDVGGRPLNVEMAKSFPQKPSHLNSSLAGSSLPMMMQQA 163
A++E++ ALA N + G RPL + + + KP + A L +M++
Sbjct: 225 AFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAAKELEEVMKRV 282
>gi|294898606|ref|XP_002776298.1| splice factor, putative [Perkinsus marinus ATCC 50983]
gi|239883208|gb|EER08114.1| splice factor, putative [Perkinsus marinus ATCC 50983]
Length = 358
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query: 67 KKTLQVSNLSPLLTVEQLRQLFSFCGTVVECTITDSKHFAYIEYSKPEEATAAL-ALNNM 125
+ TL V N+S T + + F G V+ C I K+ ++EY +A A + +
Sbjct: 20 RNTLYVGNISSRTTERDITEEFGRYGRVIRCYIPSGKNICFVEYDDERDAEDAYRGMASA 79
Query: 126 DVGGRPLNVEMAKSFPQ 142
V G LN++ AK+ P+
Sbjct: 80 RVDGNTLNLQWAKAGPR 96
>gi|395510384|ref|XP_003759457.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
[Sarcophilus harrisii]
Length = 596
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 80/178 (44%), Gaps = 18/178 (10%)
Query: 1 MTALAATTTMGTL----------SQVPMAPSAAAMAAAQAIVAAQALQAHAAQVQAQQSA 50
++ LA TM +L + P+ + ++++ AI AA AL + A + +
Sbjct: 91 LSLLAPAPTMTSLMPGAGLLPIPTPNPLTTLSVSLSSLGAIPAA-ALDPNLATL-GEIPQ 148
Query: 51 KDLSGSPDKAGKADALKKTLQVSNL-SPLLTVEQLRQLFSFCGTVVECTI----TDSKHF 105
L G+ D + K D +++T+ V NL S T +QL + F G V + T F
Sbjct: 149 PPLMGNVDPS-KIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRF 207
Query: 106 AYIEYSKPEEATAALALNNMDVGGRPLNVEMAKSFPQKPSHLNSSLAGSSLPMMMQQA 163
A++E++ ALA N + G RPL + + + KP + A L +M++
Sbjct: 208 AFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAAKELEEVMKRV 265
>gi|355691354|gb|EHH26539.1| Serine/arginine-rich-splicing regulatory protein 86 [Macaca
mulatta]
gi|355749961|gb|EHH54299.1| Serine/arginine-rich-splicing regulatory protein 86 [Macaca
fascicularis]
Length = 620
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 18/178 (10%)
Query: 1 MTALAATTTMGTL----------SQVPMAPSAAAMAAAQAIVAAQALQAHAAQVQAQQSA 50
++ LA TM +L + P+ ++++ AI AA AL + A + +
Sbjct: 135 LSLLAPAPTMTSLMPGAGLLPIPTPNPLTTLGVSLSSLGAIPAA-ALDPNIATL-GEIPQ 192
Query: 51 KDLSGSPDKAGKADALKKTLQVSNL-SPLLTVEQLRQLFSFCGTVVECTI----TDSKHF 105
L G+ D + K D +++T+ V NL S T +QL + F G V + T F
Sbjct: 193 PPLMGNVDPS-KIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRF 251
Query: 106 AYIEYSKPEEATAALALNNMDVGGRPLNVEMAKSFPQKPSHLNSSLAGSSLPMMMQQA 163
A++E++ ALA N + G RPL + + + KP + A L +M++
Sbjct: 252 AFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAAKELEEVMKRV 309
>gi|291395458|ref|XP_002714054.1| PREDICTED: splicing factor, arginine/serine-rich 12 [Oryctolagus
cuniculus]
Length = 618
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 18/178 (10%)
Query: 1 MTALAATTTMGTL----------SQVPMAPSAAAMAAAQAIVAAQALQAHAAQVQAQQSA 50
++ LA TM +L + P+ ++++ AI AA AL + A + +
Sbjct: 108 LSLLAPAPTMTSLMPGAGLLPIPTPNPLTTLGVSLSSLGAIPAA-ALDPNIAAL-GEIPQ 165
Query: 51 KDLSGSPDKAGKADALKKTLQVSNL-SPLLTVEQLRQLFSFCGTVVECTI----TDSKHF 105
L G+ D + K D +++T+ V NL S T +QL + F G V + T F
Sbjct: 166 PPLMGNVDPS-KIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRF 224
Query: 106 AYIEYSKPEEATAALALNNMDVGGRPLNVEMAKSFPQKPSHLNSSLAGSSLPMMMQQA 163
A++E++ ALA N + G RPL + + + KP + A L +M++
Sbjct: 225 AFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAAKELEEVMKRV 282
>gi|149059244|gb|EDM10251.1| splicing factor, arginine/serine-rich 12, isoform CRA_b [Rattus
norvegicus]
Length = 494
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 54/116 (46%), Gaps = 6/116 (5%)
Query: 53 LSGSPDKAGKADALKKTLQVSNL-SPLLTVEQLRQLFSFCGTVVECTI----TDSKHFAY 107
L G+ D + K D +++T+ V NL S T +QL + F G V + T FA+
Sbjct: 55 LMGNVDPS-KIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAF 113
Query: 108 IEYSKPEEATAALALNNMDVGGRPLNVEMAKSFPQKPSHLNSSLAGSSLPMMMQQA 163
+E++ ALA N + G RPL + + + KP + A L +M++
Sbjct: 114 VEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAAKELEEVMKRV 169
>gi|344272595|ref|XP_003408117.1| PREDICTED: LOW QUALITY PROTEIN: splicing regulatory
glutamine/lysine-rich protein 1-like [Loxodonta
africana]
Length = 630
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 18/178 (10%)
Query: 1 MTALAATTTMGTL----------SQVPMAPSAAAMAAAQAIVAAQALQAHAAQVQAQQSA 50
++ LA TM +L + P+ ++++ AI AA AL + A + +
Sbjct: 108 LSLLAPAPTMTSLMPGAGLLPIPTPNPLTTLGVSLSSLGAIPAA-ALDPNIATL-GEIPQ 165
Query: 51 KDLSGSPDKAGKADALKKTLQVSNL-SPLLTVEQLRQLFSFCGTVVECTI----TDSKHF 105
L G+ D + K D +++T+ V NL S T +QL + F G V + T F
Sbjct: 166 PPLMGNVDPS-KIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRF 224
Query: 106 AYIEYSKPEEATAALALNNMDVGGRPLNVEMAKSFPQKPSHLNSSLAGSSLPMMMQQA 163
A++E++ ALA N + G RPL + + + KP + A L +M++
Sbjct: 225 AFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAAKELEEVMKRV 282
>gi|348524300|ref|XP_003449661.1| PREDICTED: hypothetical protein LOC100695937 [Oreochromis
niloticus]
Length = 459
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 59/127 (46%), Gaps = 9/127 (7%)
Query: 42 AQVQAQQSAKDLSGSPDKAGKADALKKTLQVSNL-SPLLTVEQLRQLFSFCGTVVECTI- 99
A V AQ L G+ D + K D +++T+ V NL S T EQL + F G V +
Sbjct: 143 ASVLAQPP---LMGNVDPS-KIDEIRRTVYVGNLNSQTTTAEQLLEFFKQVGDVKFVRMA 198
Query: 100 ---TDSKHFAYIEYSKPEEATAALALNNMDVGGRPLNVEMAKSFPQKPSHLNSSLAGSSL 156
T FA++E+ + E AL LN + G RPL V + + KP L A L
Sbjct: 199 GDETQPTRFAFVEFVEQESVARALTLNGVMFGDRPLKVNHSNNAIVKPPELTPQAAAKEL 258
Query: 157 PMMMQQA 163
+M++
Sbjct: 259 ENVMKRV 265
>gi|9910564|ref|NP_064477.1| splicing regulatory glutamine/lysine-rich protein 1 [Rattus
norvegicus]
gi|37537914|sp|Q9JKL7.1|SREK1_RAT RecName: Full=Splicing regulatory glutamine/lysine-rich protein 1;
AltName: Full=SR-related protein of 86 kDa; AltName:
Full=Serine/arginine-rich-splicing regulatory protein
86; Short=SRrp86; AltName: Full=Splicing factor,
arginine/serine-rich 12
gi|7158880|gb|AAF37578.1|AF234765_1 serine-arginine-rich splicing regulatory protein SRRP86 [Rattus
norvegicus]
Length = 494
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 6/114 (5%)
Query: 53 LSGSPDKAGKADALKKTLQVSNL-SPLLTVEQLRQLFSFCGTVVECTI----TDSKHFAY 107
L G+ D + K D +++T+ V NL S T +QL + F G V + T FA+
Sbjct: 55 LMGNVDPS-KIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAF 113
Query: 108 IEYSKPEEATAALALNNMDVGGRPLNVEMAKSFPQKPSHLNSSLAGSSLPMMMQ 161
+E++ ALA N + G RPL + + + KP + A L +M+
Sbjct: 114 VEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAAKELEEVMK 167
>gi|256092928|ref|XP_002582129.1| SFRS11 protein [Schistosoma mansoni]
gi|353228828|emb|CCD74999.1| putative sfrs11 protein [Schistosoma mansoni]
Length = 581
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 37/74 (50%), Gaps = 7/74 (9%)
Query: 68 KTLQVSNLSPLLTVEQLRQLFSFCGTVVECTI--TDSKH-----FAYIEYSKPEEATAAL 120
+ +QV+N+SP T EQLR LF G + E + +D K YI Y +P A AL
Sbjct: 8 RVVQVTNVSPSATSEQLRTLFGHVGVLEEVVVYPSDDKEELASKVCYIRYQEPINAEVAL 67
Query: 121 ALNNMDVGGRPLNV 134
LNN R L V
Sbjct: 68 HLNNTVFLDRALIV 81
>gi|443735038|gb|ELU18893.1| hypothetical protein CAPTEDRAFT_226786 [Capitella teleta]
Length = 518
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 52/116 (44%), Gaps = 13/116 (11%)
Query: 32 VAAQALQAHAAQ----VQAQQSAKDLSGSPDKAG-----KADALKKTLQVSNLSPLLTVE 82
V Q + + Q + Q SA +L P G K D +++T+ V NL + T E
Sbjct: 122 VTNQVIVVNGKQMIQTIDPQLSAMNLPSYPLLPGGTDPSKVDEIRRTIFVGNLDSISTPE 181
Query: 83 QLRQLFSFCGTVVECTI----TDSKHFAYIEYSKPEEATAALALNNMDVGGRPLNV 134
QL Q F+ G V + T FA++E+++ AL LN GRP+ V
Sbjct: 182 QLLQFFTQAGEVKYVRMAGDETLPTRFAFVEFTEQASLLKALVLNGSLFSGRPVRV 237
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 7/74 (9%)
Query: 68 KTLQVSNLSPLLTVEQLRQLFSFCGTVVEC-------TITDSKHFAYIEYSKPEEATAAL 120
+ +QVSN++P + EQ++ LF++ G + E T T+ YI++SK EEA AL
Sbjct: 8 QVIQVSNVAPTASREQMKTLFTYIGRIEELKLFPDEFTETNQPRVCYIKFSKSEEAGVAL 67
Query: 121 ALNNMDVGGRPLNV 134
L+N R L V
Sbjct: 68 HLSNTVFVDRALMV 81
>gi|449514352|ref|XP_004177208.1| PREDICTED: LOW QUALITY PROTEIN: splicing regulatory
glutamine/lysine-rich protein 1 [Taeniopygia guttata]
Length = 633
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 65/161 (40%), Gaps = 23/161 (14%)
Query: 8 TTMGTLSQVPMAPSAAAMAAAQAIVAAQALQAHAAQVQAQQSAKDLSGSPDKAGKADALK 67
++GTL +P A + A I + G+ D + K D ++
Sbjct: 140 VSLGTLGAIPAAALDPNITALGEIPQPPIM-----------------GNVDPS-KIDEIR 181
Query: 68 KTLQVSNL-SPLLTVEQLRQLFSFCGTVVECTI----TDSKHFAYIEYSKPEEATAALAL 122
+T+ V NL S T +QL + F G V + T FA++E++ ALA
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 241
Query: 123 NNMDVGGRPLNVEMAKSFPQKPSHLNSSLAGSSLPMMMQQA 163
N + G RPL + + + KP + A L +M++
Sbjct: 242 NGVMFGDRPLKINHSNNAIVKPPEMTPQAAAKELEEVMKRV 282
>gi|410300176|gb|JAA28688.1| splicing regulatory glutamine/lysine-rich protein 1 [Pan
troglodytes]
Length = 626
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 18/178 (10%)
Query: 1 MTALAATTTMGTL----------SQVPMAPSAAAMAAAQAIVAAQALQAHAAQVQAQQSA 50
++ LA TM +L + P+ ++++ AI AA AL + A + +
Sbjct: 108 LSLLAPAPTMTSLMPGAGLLPIPTPNPLTTLGVSLSSLGAIPAA-ALDPNIATL-GEIPQ 165
Query: 51 KDLSGSPDKAGKADALKKTLQVSNL-SPLLTVEQLRQLFSFCGTVVECTI----TDSKHF 105
L G+ D + K D +++T+ V NL S T +QL + F G V + T F
Sbjct: 166 PPLMGNVDPS-KIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRF 224
Query: 106 AYIEYSKPEEATAALALNNMDVGGRPLNVEMAKSFPQKPSHLNSSLAGSSLPMMMQQA 163
A++E++ ALA N + G RPL + + + KP + A L +M++
Sbjct: 225 AFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAAKELEEVMKRV 282
>gi|426384528|ref|XP_004058814.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 1 [Gorilla gorilla gorilla]
Length = 626
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 18/178 (10%)
Query: 1 MTALAATTTMGTL----------SQVPMAPSAAAMAAAQAIVAAQALQAHAAQVQAQQSA 50
++ LA TM +L + P+ ++++ AI AA AL + A + +
Sbjct: 108 LSLLAPAPTMTSLMPGAGLLPIPTPNPLTTLGVSLSSLGAIPAA-ALDPNIATL-GEIPQ 165
Query: 51 KDLSGSPDKAGKADALKKTLQVSNL-SPLLTVEQLRQLFSFCGTVVECTI----TDSKHF 105
L G+ D + K D +++T+ V NL S T +QL + F G V + T F
Sbjct: 166 PPLMGNVDPS-KIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRF 224
Query: 106 AYIEYSKPEEATAALALNNMDVGGRPLNVEMAKSFPQKPSHLNSSLAGSSLPMMMQQA 163
A++E++ ALA N + G RPL + + + KP + A L +M++
Sbjct: 225 AFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAAKELEEVMKRV 282
>gi|116089325|ref|NP_001070667.1| splicing regulatory glutamine/lysine-rich protein 1 isoform a [Homo
sapiens]
gi|119571714|gb|EAW51329.1| splicing factor, arginine/serine-rich 12, isoform CRA_b [Homo
sapiens]
Length = 624
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 18/178 (10%)
Query: 1 MTALAATTTMGTL----------SQVPMAPSAAAMAAAQAIVAAQALQAHAAQVQAQQSA 50
++ LA TM +L + P+ ++++ AI AA AL + A + +
Sbjct: 108 LSLLAPAPTMTSLMPGAGLLPIPTPNPLTTLGVSLSSLGAIPAA-ALDPNIATL-GEIPQ 165
Query: 51 KDLSGSPDKAGKADALKKTLQVSNL-SPLLTVEQLRQLFSFCGTVVECTI----TDSKHF 105
L G+ D + K D +++T+ V NL S T +QL + F G V + T F
Sbjct: 166 PPLMGNVDPS-KIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRF 224
Query: 106 AYIEYSKPEEATAALALNNMDVGGRPLNVEMAKSFPQKPSHLNSSLAGSSLPMMMQQA 163
A++E++ ALA N + G RPL + + + KP + A L +M++
Sbjct: 225 AFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAAKELEEVMKRV 282
>gi|332233718|ref|XP_003266050.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 1 [Nomascus leucogenys]
Length = 626
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 18/178 (10%)
Query: 1 MTALAATTTMGTL----------SQVPMAPSAAAMAAAQAIVAAQALQAHAAQVQAQQSA 50
++ LA TM +L + P+ ++++ AI AA AL + A + +
Sbjct: 108 LSLLAPAPTMTSLMPGAGLLPIPTPNPLTTLGVSLSSLGAIPAA-ALDPNIATL-GEIPQ 165
Query: 51 KDLSGSPDKAGKADALKKTLQVSNL-SPLLTVEQLRQLFSFCGTVVECTI----TDSKHF 105
L G+ D + K D +++T+ V NL S T +QL + F G V + T F
Sbjct: 166 PPLMGNVDPS-KIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRF 224
Query: 106 AYIEYSKPEEATAALALNNMDVGGRPLNVEMAKSFPQKPSHLNSSLAGSSLPMMMQQA 163
A++E++ ALA N + G RPL + + + KP + A L +M++
Sbjct: 225 AFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAAKELEEVMKRV 282
>gi|402871715|ref|XP_003899799.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
[Papio anubis]
gi|387541364|gb|AFJ71309.1| splicing regulatory glutamine/lysine-rich protein 1 isoform a
[Macaca mulatta]
Length = 626
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 18/178 (10%)
Query: 1 MTALAATTTMGTL----------SQVPMAPSAAAMAAAQAIVAAQALQAHAAQVQAQQSA 50
++ LA TM +L + P+ ++++ AI AA AL + A + +
Sbjct: 108 LSLLAPAPTMTSLMPGAGLLPIPTPNPLTTLGVSLSSLGAIPAA-ALDPNIATL-GEIPQ 165
Query: 51 KDLSGSPDKAGKADALKKTLQVSNL-SPLLTVEQLRQLFSFCGTVVECTI----TDSKHF 105
L G+ D + K D +++T+ V NL S T +QL + F G V + T F
Sbjct: 166 PPLMGNVDPS-KIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRF 224
Query: 106 AYIEYSKPEEATAALALNNMDVGGRPLNVEMAKSFPQKPSHLNSSLAGSSLPMMMQQA 163
A++E++ ALA N + G RPL + + + KP + A L +M++
Sbjct: 225 AFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAAKELEEVMKRV 282
>gi|397470471|ref|XP_003806845.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1-like
[Pan paniscus]
Length = 626
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 18/178 (10%)
Query: 1 MTALAATTTMGTL----------SQVPMAPSAAAMAAAQAIVAAQALQAHAAQVQAQQSA 50
++ LA TM +L + P+ ++++ AI AA AL + A + +
Sbjct: 108 LSLLAPAPTMTSLMPGAGLLPIPTPNPLTTLGVSLSSLGAIPAA-ALDPNIATL-GEIPQ 165
Query: 51 KDLSGSPDKAGKADALKKTLQVSNL-SPLLTVEQLRQLFSFCGTVVECTI----TDSKHF 105
L G+ D + K D +++T+ V NL S T +QL + F G V + T F
Sbjct: 166 PPLMGNVDPS-KIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRF 224
Query: 106 AYIEYSKPEEATAALALNNMDVGGRPLNVEMAKSFPQKPSHLNSSLAGSSLPMMMQQA 163
A++E++ ALA N + G RPL + + + KP + A L +M++
Sbjct: 225 AFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAAKELEEVMKRV 282
>gi|327263062|ref|XP_003216340.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1-like
[Anolis carolinensis]
Length = 626
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 73/176 (41%), Gaps = 15/176 (8%)
Query: 1 MTALAATTTM------GTLSQVPMAP--SAAAMAAAQAIVAAQALQAHAAQVQAQQSAKD 52
++ LA T+ G L +P P S ++ + A AL H
Sbjct: 108 LSLLAPAPTITSLIPGGGLLPIPTPPVSSIGIPLSSLGAIPAAALD-HNITAIGDIPQPP 166
Query: 53 LSGSPDKAGKADALKKTLQVSNL-SPLLTVEQLRQLFSFCGTVVECTI----TDSKHFAY 107
+ G+ D + K D +++T+ V NL S T +QL + F G V + T FA+
Sbjct: 167 IMGNVDPS-KIDEIRRTVYVGNLNSQTTTADQLLEFFKPVGEVKFVRMAGDETQPTRFAF 225
Query: 108 IEYSKPEEATAALALNNMDVGGRPLNVEMAKSFPQKPSHLNSSLAGSSLPMMMQQA 163
+E++ ALA N + G RPL + + + KP L A L +M++
Sbjct: 226 VEFADQNSVPRALAFNGVVFGDRPLKINHSNNAIVKPPELTPQAAAKELEEVMKRV 281
>gi|74140797|dbj|BAC29709.2| unnamed protein product [Mus musculus]
Length = 401
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 54/116 (46%), Gaps = 6/116 (5%)
Query: 53 LSGSPDKAGKADALKKTLQVSNL-SPLLTVEQLRQLFSFCGTVVECTI----TDSKHFAY 107
L G+ D + K D +++T+ V NL S T +QL + F G V + T FA+
Sbjct: 55 LMGNVDPS-KIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAF 113
Query: 108 IEYSKPEEATAALALNNMDVGGRPLNVEMAKSFPQKPSHLNSSLAGSSLPMMMQQA 163
+E++ ALA N + G RPL + + + KP + A L +M++
Sbjct: 114 VEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAAKELEEVMKRV 169
>gi|194223833|ref|XP_001492097.2| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 1 [Equus caballus]
Length = 628
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 18/178 (10%)
Query: 1 MTALAATTTMGTL----------SQVPMAPSAAAMAAAQAIVAAQALQAHAAQVQAQQSA 50
++ LA TM +L + P+ ++++ AI AA AL + A + +
Sbjct: 108 LSLLAPAPTMTSLMPGAGLLPIPTPNPLTTLGVSLSSLGAIPAA-ALDPNIATL-GEIPQ 165
Query: 51 KDLSGSPDKAGKADALKKTLQVSNL-SPLLTVEQLRQLFSFCGTVVECTI----TDSKHF 105
L G+ D + K D +++T+ V NL S T +QL + F G V + T F
Sbjct: 166 PPLMGNVDPS-KIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRF 224
Query: 106 AYIEYSKPEEATAALALNNMDVGGRPLNVEMAKSFPQKPSHLNSSLAGSSLPMMMQQA 163
A++E++ ALA N + G RPL + + + KP + A L +M++
Sbjct: 225 AFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAAKELEEVMKRV 282
>gi|301767860|ref|XP_002919343.1| PREDICTED: hypothetical protein LOC100466086 [Ailuropoda
melanoleuca]
gi|281341776|gb|EFB17360.1| hypothetical protein PANDA_007970 [Ailuropoda melanoleuca]
Length = 628
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 18/178 (10%)
Query: 1 MTALAATTTMGTL----------SQVPMAPSAAAMAAAQAIVAAQALQAHAAQVQAQQSA 50
++ LA TM +L + P+ ++++ AI AA AL + A + +
Sbjct: 108 LSLLAPAPTMTSLMPGAGLLPIPTPNPLTTLGVSLSSLGAIPAA-ALDPNIATL-GEIPQ 165
Query: 51 KDLSGSPDKAGKADALKKTLQVSNL-SPLLTVEQLRQLFSFCGTVVECTI----TDSKHF 105
L G+ D + K D +++T+ V NL S T +QL + F G V + T F
Sbjct: 166 PPLMGNVDPS-KIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRF 224
Query: 106 AYIEYSKPEEATAALALNNMDVGGRPLNVEMAKSFPQKPSHLNSSLAGSSLPMMMQQA 163
A++E++ ALA N + G RPL + + + KP + A L +M++
Sbjct: 225 AFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAAKELEEVMKRV 282
>gi|426246379|ref|XP_004016972.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 1 [Ovis aries]
Length = 632
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 18/178 (10%)
Query: 1 MTALAATTTMGTL----------SQVPMAPSAAAMAAAQAIVAAQALQAHAAQVQAQQSA 50
++ LA TM +L + P+ ++++ AI AA AL + A + +
Sbjct: 108 LSLLAPAPTMTSLMPGAGLLPIPTPNPLTTLGVSLSSLGAIPAA-ALDPNIATL-GEIPQ 165
Query: 51 KDLSGSPDKAGKADALKKTLQVSNL-SPLLTVEQLRQLFSFCGTVVECTI----TDSKHF 105
L G+ D + K D +++T+ V NL S T +QL + F G V + T F
Sbjct: 166 PPLMGNVDPS-KIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRF 224
Query: 106 AYIEYSKPEEATAALALNNMDVGGRPLNVEMAKSFPQKPSHLNSSLAGSSLPMMMQQA 163
A++E++ ALA N + G RPL + + + KP + A L +M++
Sbjct: 225 AFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAAKELEEVMKRV 282
>gi|39645085|gb|AAH63761.1| Sfrs12 protein, partial [Mus musculus]
Length = 407
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 54/116 (46%), Gaps = 6/116 (5%)
Query: 53 LSGSPDKAGKADALKKTLQVSNL-SPLLTVEQLRQLFSFCGTVVECTI----TDSKHFAY 107
L G+ D + K D +++T+ V NL S T +QL + F G V + T FA+
Sbjct: 55 LMGNVDPS-KIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAF 113
Query: 108 IEYSKPEEATAALALNNMDVGGRPLNVEMAKSFPQKPSHLNSSLAGSSLPMMMQQA 163
+E++ ALA N + G RPL + + + KP + A L +M++
Sbjct: 114 VEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAAKELEEVMKRV 169
>gi|329663695|ref|NP_001193066.1| splicing regulatory glutamine/lysine-rich protein 1 [Bos taurus]
Length = 632
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 18/178 (10%)
Query: 1 MTALAATTTMGTL----------SQVPMAPSAAAMAAAQAIVAAQALQAHAAQVQAQQSA 50
++ LA TM +L + P+ ++++ AI AA AL + A + +
Sbjct: 108 LSLLAPAPTMTSLMPGAGLLPIPTPNPLTTLGVSLSSLGAIPAA-ALDPNIATL-GEIPQ 165
Query: 51 KDLSGSPDKAGKADALKKTLQVSNL-SPLLTVEQLRQLFSFCGTVVECTI----TDSKHF 105
L G+ D + K D +++T+ V NL S T +QL + F G V + T F
Sbjct: 166 PPLMGNVDPS-KIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRF 224
Query: 106 AYIEYSKPEEATAALALNNMDVGGRPLNVEMAKSFPQKPSHLNSSLAGSSLPMMMQQA 163
A++E++ ALA N + G RPL + + + KP + A L +M++
Sbjct: 225 AFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAAKELEEVMKRV 282
>gi|395825410|ref|XP_003785928.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
[Otolemur garnettii]
Length = 617
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 78/178 (43%), Gaps = 18/178 (10%)
Query: 1 MTALAATTTMGTL----------SQVPMAPSAAAMAAAQAIVAAQALQAHAAQVQAQQSA 50
++ LA TM +L + P+ ++++ AI AA AL + + +
Sbjct: 108 LSLLAPAPTMTSLMPGAGLLPIPTPNPLTTLGVSLSSLGAIPAA-ALDPNITTL-GEIPQ 165
Query: 51 KDLSGSPDKAGKADALKKTLQVSNL-SPLLTVEQLRQLFSFCGTVVECTI----TDSKHF 105
L G+ D + K D +++T+ V NL S T +QL + F G V + T F
Sbjct: 166 PPLMGNVDPS-KIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRF 224
Query: 106 AYIEYSKPEEATAALALNNMDVGGRPLNVEMAKSFPQKPSHLNSSLAGSSLPMMMQQA 163
A++E++ ALA N + G RPL + + + KP + A L +M++
Sbjct: 225 AFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAAKELEEVMKRV 282
>gi|431907792|gb|ELK11399.1| Splicing factor, arginine/serine-rich 12 [Pteropus alecto]
Length = 630
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 70/152 (46%), Gaps = 8/152 (5%)
Query: 17 PMAPSAAAMAAAQAIVAAQALQAHAAQVQAQQSAKDLSGSPDKAGKADALKKTLQVSNL- 75
P+ ++++ AI AA AL + A + + L G+ D + K D +++T+ V NL
Sbjct: 134 PLTTLGVSLSSLGAIPAA-ALDPNIATL-GEIPQPPLMGNVDPS-KIDEIRRTVYVGNLN 190
Query: 76 SPLLTVEQLRQLFSFCGTVVECTI----TDSKHFAYIEYSKPEEATAALALNNMDVGGRP 131
S T +QL + F G V + T FA++E++ ALA N + G RP
Sbjct: 191 SQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRP 250
Query: 132 LNVEMAKSFPQKPSHLNSSLAGSSLPMMMQQA 163
L + + + KP + A L +M++
Sbjct: 251 LKINHSNNAIVKPPEMTPQAAAKELEEVMKRV 282
>gi|345794152|ref|XP_544361.3| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 1 [Canis lupus familiaris]
Length = 626
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 18/178 (10%)
Query: 1 MTALAATTTMGTL----------SQVPMAPSAAAMAAAQAIVAAQALQAHAAQVQAQQSA 50
++ LA TM +L + P+ ++++ AI AA AL + A + +
Sbjct: 108 LSLLAPAPTMTSLMPGAGLLPIPTPNPLTTLGVSLSSLGAIPAA-ALDPNIATL-GEIPQ 165
Query: 51 KDLSGSPDKAGKADALKKTLQVSNL-SPLLTVEQLRQLFSFCGTVVECTI----TDSKHF 105
L G+ D + K D +++T+ V NL S T +QL + F G V + T F
Sbjct: 166 PPLMGNVDPS-KIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRF 224
Query: 106 AYIEYSKPEEATAALALNNMDVGGRPLNVEMAKSFPQKPSHLNSSLAGSSLPMMMQQA 163
A++E++ ALA N + G RPL + + + KP + A L +M++
Sbjct: 225 AFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAAKELEEVMKRV 282
>gi|328865553|gb|EGG13939.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 949
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 71/151 (47%), Gaps = 21/151 (13%)
Query: 80 TVEQLRQLFSFCGTVVECTITDSKH------FAYIEYSKPEEATAALA-LNNMDVGGRPL 132
T +Q++ +FS G VV C++ + + +I+Y P+ A A++ N D+ GR L
Sbjct: 754 TEDQIKTIFSSIGNVVSCSLKPNLETGRHMGYGFIDYDNPKSAEDAISTFNGYDINGRQL 813
Query: 133 NVEMAKSFPQKPSHLNSSLAGSSLPMMMQQAVAMQQMQFQQALLMQQTLTAQQ-AANRAA 191
V +KP N+ ++ +++ +++ Q+ LL Q+ L A + A NR
Sbjct: 814 KV-------RKPVR-NAPKVNNNDGNLLEDNISLNNE--QKILLTQKLLAASEPATNRCM 863
Query: 192 SMK---SATELAAARAAEISKKLKADGLVDE 219
M+ S EL EI + + G V++
Sbjct: 864 VMRNLGSPAELDEYFEEEIKNECSSFGAVEK 894
>gi|444510679|gb|ELV09695.1| Splicing regulatory glutamine/lysine-rich protein 1 [Tupaia
chinensis]
Length = 592
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 69/152 (45%), Gaps = 8/152 (5%)
Query: 17 PMAPSAAAMAAAQAIVAAQALQAHAAQVQAQQSAKDLSGSPDKAGKADALKKTLQVSNL- 75
P+ ++++ AI AA AL + + + L G+ D + K D +++T+ V NL
Sbjct: 99 PLTTLGVSLSSLGAIPAA-ALDPNITTL-GEIPQPPLMGNVDPS-KIDEIRRTVYVGNLN 155
Query: 76 SPLLTVEQLRQLFSFCGTVVECTI----TDSKHFAYIEYSKPEEATAALALNNMDVGGRP 131
S T +QL + F G V + T FA++E++ ALA N + G RP
Sbjct: 156 SQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRP 215
Query: 132 LNVEMAKSFPQKPSHLNSSLAGSSLPMMMQQA 163
L + + + KP + A L +M++
Sbjct: 216 LKINHSNNAIVKPPEMTPQAAAKELEEVMKRV 247
>gi|351713063|gb|EHB15982.1| Splicing factor, arginine/serine-rich 12 [Heterocephalus glaber]
Length = 535
Score = 46.2 bits (108), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 70/152 (46%), Gaps = 8/152 (5%)
Query: 17 PMAPSAAAMAAAQAIVAAQALQAHAAQVQAQQSAKDLSGSPDKAGKADALKKTLQVSNL- 75
P+ ++++ AI AA AL + A + + L G+ D + K D +++T+ V NL
Sbjct: 134 PLTTLGVSLSSLGAIPAA-ALDPNIATL-GEIPQPPLMGNVDPS-KIDEIRRTVYVGNLN 190
Query: 76 SPLLTVEQLRQLFSFCGTVVECTI----TDSKHFAYIEYSKPEEATAALALNNMDVGGRP 131
S T +QL + F G V + T FA++E++ ALA N + G RP
Sbjct: 191 SQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRP 250
Query: 132 LNVEMAKSFPQKPSHLNSSLAGSSLPMMMQQA 163
L + + + KP + A L +M++
Sbjct: 251 LKINHSNNAIVKPPEMTPQAAAKELEEVMKRV 282
>gi|358339035|dbj|GAA47167.1| splicing factor arginine/serine-rich 12 [Clonorchis sinensis]
Length = 1228
Score = 45.8 bits (107), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 36/74 (48%), Gaps = 7/74 (9%)
Query: 68 KTLQVSNLSPLLTVEQLRQLFSFCGTVVECTIT--DSKH-----FAYIEYSKPEEATAAL 120
K +QV+N+SP T EQLR LF G + E + D K AYI Y P A AL
Sbjct: 671 KIVQVTNVSPSATTEQLRTLFGHIGVLEEFVLYPGDEKEEPASKVAYIRYHDPINAEVAL 730
Query: 121 ALNNMDVGGRPLNV 134
LNN R L V
Sbjct: 731 HLNNTVFLDRALIV 744
>gi|149059243|gb|EDM10250.1| splicing factor, arginine/serine-rich 12, isoform CRA_a [Rattus
norvegicus]
Length = 610
Score = 45.8 bits (107), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 54/116 (46%), Gaps = 6/116 (5%)
Query: 53 LSGSPDKAGKADALKKTLQVSNL-SPLLTVEQLRQLFSFCGTVVECTI----TDSKHFAY 107
L G+ D + K D +++T+ V NL S T +QL + F G V + T FA+
Sbjct: 171 LMGNVDPS-KIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAF 229
Query: 108 IEYSKPEEATAALALNNMDVGGRPLNVEMAKSFPQKPSHLNSSLAGSSLPMMMQQA 163
+E++ ALA N + G RPL + + + KP + A L +M++
Sbjct: 230 VEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAAKELEEVMKRV 285
>gi|348553835|ref|XP_003462731.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1-like
[Cavia porcellus]
Length = 556
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 70/152 (46%), Gaps = 8/152 (5%)
Query: 17 PMAPSAAAMAAAQAIVAAQALQAHAAQVQAQQSAKDLSGSPDKAGKADALKKTLQVSNL- 75
P+ ++++ AI AA AL + A + + L G+ D + K D +++T+ V NL
Sbjct: 134 PLTTLGVSLSSLGAIPAA-ALDPNIATL-GEIPQPPLMGNVDPS-KIDEIRRTVYVGNLN 190
Query: 76 SPLLTVEQLRQLFSFCGTVVECTI----TDSKHFAYIEYSKPEEATAALALNNMDVGGRP 131
S T +QL + F G V + T FA++E++ ALA N + G RP
Sbjct: 191 SQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRP 250
Query: 132 LNVEMAKSFPQKPSHLNSSLAGSSLPMMMQQA 163
L + + + KP + A L +M++
Sbjct: 251 LKINHSNNAIVKPPEMTPQAAAKELEEVMKRV 282
>gi|297294417|ref|XP_001087835.2| PREDICTED: hypothetical protein LOC697731 isoform 1 [Macaca
mulatta]
Length = 516
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 70/152 (46%), Gaps = 8/152 (5%)
Query: 17 PMAPSAAAMAAAQAIVAAQALQAHAAQVQAQQSAKDLSGSPDKAGKADALKKTLQVSNL- 75
P+ ++++ AI AA AL + A + + L G+ D + K D +++T+ V NL
Sbjct: 134 PLTTLGVSLSSLGAIPAA-ALDPNIATL-GEIPQPPLMGNVDPS-KIDEIRRTVYVGNLN 190
Query: 76 SPLLTVEQLRQLFSFCGTVVECTI----TDSKHFAYIEYSKPEEATAALALNNMDVGGRP 131
S T +QL + F G V + T FA++E++ ALA N + G RP
Sbjct: 191 SQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRP 250
Query: 132 LNVEMAKSFPQKPSHLNSSLAGSSLPMMMQQA 163
L + + + KP + A L +M++
Sbjct: 251 LKINHSNNAIVKPPEMTPQAAAKELEEVMKRV 282
>gi|302842614|ref|XP_002952850.1| hypothetical protein VOLCADRAFT_105671 [Volvox carteri f.
nagariensis]
gi|300261890|gb|EFJ46100.1| hypothetical protein VOLCADRAFT_105671 [Volvox carteri f.
nagariensis]
Length = 776
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 61/137 (44%), Gaps = 23/137 (16%)
Query: 2 TALAATTTMGTLSQVPMAPSAAAMAAAQAIVAAQALQAHAAQVQAQQSAKDLSGSPDKAG 61
T AA G + VP P A + AA A A V
Sbjct: 276 TLAAAGLLTGGTASVPGLPGGLGAATNPLVAAAFPQLASVAPV----------------- 318
Query: 62 KADALKKTLQVSNLSPLLTVEQLRQLFSFCGTV--VECTITDSKHFAYIEYSKPEEATAA 119
D +TL VSN++ +T EQL+QLF+ G+V ++ TD A IE + ++A +A
Sbjct: 319 -VDPQARTLLVSNITSKVTPEQLKQLFAVLGSVQHLQMLGTD---MAMIEMTTLQDAQSA 374
Query: 120 LALNNMDVGGRPLNVEM 136
LAL+ +G + L+V+
Sbjct: 375 LALHGHQLGDKALSVQF 391
>gi|363744206|ref|XP_424756.3| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
[Gallus gallus]
Length = 621
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 49/107 (45%), Gaps = 5/107 (4%)
Query: 62 KADALKKTLQVSNL-SPLLTVEQLRQLFSFCGTVVECTI----TDSKHFAYIEYSKPEEA 116
K D +++T+ V NL S T +QL + F G V + T FA++E++
Sbjct: 176 KIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSV 235
Query: 117 TAALALNNMDVGGRPLNVEMAKSFPQKPSHLNSSLAGSSLPMMMQQA 163
ALA N + G RPL + + + KP + A L +M++
Sbjct: 236 PRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAAKELEEVMKRV 282
>gi|74217177|dbj|BAC34905.2| unnamed protein product [Mus musculus]
Length = 513
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 54/116 (46%), Gaps = 6/116 (5%)
Query: 53 LSGSPDKAGKADALKKTLQVSNL-SPLLTVEQLRQLFSFCGTVVECTI----TDSKHFAY 107
L G+ D + K D +++T+ V NL S T +QL + F G V + T FA+
Sbjct: 171 LMGNVDPS-KIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAF 229
Query: 108 IEYSKPEEATAALALNNMDVGGRPLNVEMAKSFPQKPSHLNSSLAGSSLPMMMQQA 163
+E++ ALA N + G RPL + + + KP + A L +M++
Sbjct: 230 VEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAAKELEEVMKRV 285
>gi|350594366|ref|XP_003134051.3| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1,
partial [Sus scrofa]
Length = 587
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 70/152 (46%), Gaps = 8/152 (5%)
Query: 17 PMAPSAAAMAAAQAIVAAQALQAHAAQVQAQQSAKDLSGSPDKAGKADALKKTLQVSNL- 75
P+ ++++ AI AA AL + A + + L G+ D + K D +++T+ V NL
Sbjct: 172 PLTTLGVSLSSLGAIPAA-ALDPNIATL-GEIPQPPLMGNVDPS-KIDEIRRTVYVGNLN 228
Query: 76 SPLLTVEQLRQLFSFCGTVVECTI----TDSKHFAYIEYSKPEEATAALALNNMDVGGRP 131
S T +QL + F G V + T FA++E++ ALA N + G RP
Sbjct: 229 SQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRP 288
Query: 132 LNVEMAKSFPQKPSHLNSSLAGSSLPMMMQQA 163
L + + + KP + A L +M++
Sbjct: 289 LKINHSNNAIVKPPEMTPQAAAKELEEVMKRV 320
>gi|432884719|ref|XP_004074556.1| PREDICTED: uncharacterized protein LOC101155617 [Oryzias latipes]
Length = 445
Score = 42.7 bits (99), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 68/170 (40%), Gaps = 17/170 (10%)
Query: 10 MGTLSQVPMAPSAAAMAAAQAIVAAQALQ-----------AHAAQVQAQQSAKDLSGSPD 58
+ L+ VP PS I LQ A + + + L G+ D
Sbjct: 97 LSLLAPVPPVPSLIPGGGLLPIPTPSPLQNLNLPLVNRISAGLSPTSSVIAQPPLMGNVD 156
Query: 59 KAGKADALKKTLQVSNL-SPLLTVEQLRQLFSFCGTVVECTI----TDSKHFAYIEYSKP 113
+ K D +++T+ V NL S T +QL + F G V + T FA++E+ +
Sbjct: 157 PS-KIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGDVKFVRMAGDETQPTRFAFVEFVEQ 215
Query: 114 EEATAALALNNMDVGGRPLNVEMAKSFPQKPSHLNSSLAGSSLPMMMQQA 163
+ AL N + G RPL V + + KP L A L +M++
Sbjct: 216 DSVARALTFNGVMFGDRPLKVNHSNNAIVKPPELTPQAAAKELESVMKRV 265
>gi|307177851|gb|EFN66814.1| Probable splicing factor, arginine/serine-rich 7 [Camponotus
floridanus]
Length = 495
Score = 42.4 bits (98), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 62 KADALKKTLQVSNLSPLLTVEQLRQLFSFCGTVVE----CT-ITDSKHFAYIEYSKPEEA 116
+ + +++TL V+NL L++ EQL FS ++ C+ +DS+H+A +E S+
Sbjct: 159 RIEEIRRTLIVANLDSLVSPEQLLDFFSNNNVEIKYLRMCSRDSDSEHYALVELSEQAAV 218
Query: 117 TAALALNNMDVGGRPLNV 134
AAL LN + RP+ +
Sbjct: 219 IAALLLNGKPLMERPIKI 236
>gi|198429455|ref|XP_002129672.1| PREDICTED: similar to splicing factor, arginine/serine-rich 12
[Ciona intestinalis]
Length = 373
Score = 42.4 bits (98), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 54/119 (45%), Gaps = 13/119 (10%)
Query: 32 VAAQALQAHAAQVQAQQSAKDLSGSPDKAGKADALKKTLQVSNL-SPLLTVEQLRQLFSF 90
VA Q A +QA G D+ K D +K+T+ V NL S T +QL F
Sbjct: 92 VAMQFATPATALIQA-------GGVIDQT-KLDEIKRTIYVGNLDSKQATADQLMTFFGT 143
Query: 91 CGTVVECTI----TDSKHFAYIEYSKPEEATAALALNNMDVGGRPLNVEMAKSFPQKPS 145
CG V + T FA+IE++K E +A+ LN G R L + + + KP+
Sbjct: 144 CGEVKFVRMAGDETQPTRFAFIEFAKIEHVDSAMKLNGTLFGDRALKINHSNNAIVKPA 202
>gi|242004168|ref|XP_002436264.1| splicing factor, arginine/serine-rich, putative [Ixodes scapularis]
gi|215499600|gb|EEC09094.1| splicing factor, arginine/serine-rich, putative [Ixodes scapularis]
Length = 363
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 8/72 (11%)
Query: 71 QVSNLSPLLTVEQLRQLFSFCGTVVECTITDSKHF--------AYIEYSKPEEATAALAL 122
QV+N++P T+EQ+ LF F G ++E + S F YI Y +P A L
Sbjct: 9 QVTNVAPTATLEQMSTLFGFLGKILEIKMYPSDEFLLQPVAKVCYIRYEEPWSVGVAQHL 68
Query: 123 NNMDVGGRPLNV 134
N R L V
Sbjct: 69 TNTVFVDRALIV 80
>gi|427783535|gb|JAA57219.1| Putative splicing factor sr protein superfamily [Rhipicephalus
pulchellus]
Length = 401
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 69 TLQVSNLSPLLTVEQLRQLFSFCGTVVECTIT------DSKHFAYIEYSKPEEATAAL-A 121
+L+V NL+ T E L+++F G V + I +S+ FA++ + + A+ +
Sbjct: 15 SLKVDNLTYRTTPEDLKRVFEKYGDVGDVYIPRHPYTRESRGFAFVRFYDKRDCEDAMDS 74
Query: 122 LNNMDVGGRPLNVEMAK 138
L+ + GR L V+MA+
Sbjct: 75 LDGYILDGRELRVQMAR 91
>gi|427794699|gb|JAA62801.1| Putative splicing factor sr protein superfamily, partial
[Rhipicephalus pulchellus]
Length = 368
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 7/76 (9%)
Query: 70 LQVSNLSPLLTVEQLRQLFSFCGTVVECTIT------DSKHFAYIEYSKPEEATAAL-AL 122
L+V NL+ T E L+++F G V + I +S+ FA++ + + A+ AL
Sbjct: 1 LKVDNLTYRTTPEDLKRVFERYGDVGDVYIPRHPYTRESRGFAFVRFYDKRDCEDAMDAL 60
Query: 123 NNMDVGGRPLNVEMAK 138
+ + GR L V+MA+
Sbjct: 61 DGYMMDGRELRVQMAR 76
>gi|357517311|ref|XP_003628944.1| UDP-galactose:fucoside alpha-3-galactosyltransferase [Medicago
truncatula]
gi|355522966|gb|AET03420.1| UDP-galactose:fucoside alpha-3-galactosyltransferase [Medicago
truncatula]
Length = 1906
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 79/153 (51%), Gaps = 34/153 (22%)
Query: 223 TKQKSRSPSTSRARSRSKSRSPVHYQRTYRARS--RSKSRSPVSF-HRRRRSRSFSPPYR 279
+K++ SPS R++ R SRSP H +R++R S S S VSF R RRSRS SP +
Sbjct: 872 SKKRDLSPSPVRSKRRQVSRSP-HSKRSHRGHSPYSSLDNSRVSFLCRVRRSRSKSPVRK 930
Query: 280 HRRGHRSRSPLRSRHYSKYDNERLSTRDTRDGADRSRRESDISHHSPVPRRRKSRSVSPH 339
HR RSRSP+R +H S RSR SPV R+ KSRS SP
Sbjct: 931 HRS--RSRSPVR-KHRS-----------------RSR--------SPV-RKHKSRSRSPV 961
Query: 340 SRKSYRSDSGSPKHRQESSARKSSRAHSKSPKR 372
+ RS S KH+ S RK R+ S+SP R
Sbjct: 962 RKHRSRSKSPVRKHKSRSPVRK-HRSRSRSPVR 993
>gi|330793087|ref|XP_003284617.1| hypothetical protein DICPUDRAFT_148416 [Dictyostelium purpureum]
gi|325085416|gb|EGC38823.1| hypothetical protein DICPUDRAFT_148416 [Dictyostelium purpureum]
Length = 829
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 54/113 (47%), Gaps = 6/113 (5%)
Query: 70 LQVSNLSPLLTVEQLRQLFSFCGTVVECTITDS------KHFAYIEYSKPEEATAALALN 123
+ + +++ +T EQ+R +FS G ++ C + + K + +I++ + A ALA+N
Sbjct: 624 IYIGSINWNVTEEQIRGIFSQFGKIISCFLMQNTETGKHKGYGFIDFENKKSADDALAMN 683
Query: 124 NMDVGGRPLNVEMAKSFPQKPSHLNSSLAGSSLPMMMQQAVAMQQMQFQQALL 176
++ GR + V + N S+ +SL + Q++Q Q LL
Sbjct: 684 GFELLGRAMKVGRPTKGASANTISNGSIDKTSLEGEAMLTTSDQRIQLTQKLL 736
>gi|427786359|gb|JAA58631.1| Putative splicing factor sr protein superfamily [Rhipicephalus
pulchellus]
Length = 383
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 69 TLQVSNLSPLLTVEQLRQLFSFCGTVVECTIT------DSKHFAYIEYSKPEEATAAL-A 121
+L+V NL+ T E L+++F G V + I +S+ FA++ + + A+ A
Sbjct: 15 SLKVDNLTYRTTPEDLKRVFERYGDVGDVYIPRHPYTRESRGFAFVRFYDKRDCEDAMDA 74
Query: 122 LNNMDVGGRPLNVEMAK 138
L+ + GR L V+MA+
Sbjct: 75 LDGYMMDGRELRVQMAR 91
>gi|413947085|gb|AFW79734.1| hypothetical protein ZEAMMB73_180978 [Zea mays]
gi|413947086|gb|AFW79735.1| hypothetical protein ZEAMMB73_180978 [Zea mays]
Length = 379
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 128/255 (50%), Positives = 164/255 (64%), Gaps = 32/255 (12%)
Query: 136 MAKSFPQKPSHLNSSLAGSSLPMMMQQAVAMQQMQFQQALLMQQTLTAQQAANRAASMKS 195
MAKS P K A ++LPMMMQQA+ +QQMQFQQAL+MQQ++ QQAA RAA+MKS
Sbjct: 1 MAKSLPSK--------ANNNLPMMMQQAIQLQQMQFQQALMMQQSIATQQAAARAATMKS 52
Query: 196 ATELAAARAAEISKKLKADGLVDEDKETKQKSRSPSTSRARSRSKSRSPVHYQRTYRARS 255
ATE AAARAAEIS+KLKA+G ++ E K ++ KSRSP RS
Sbjct: 53 ATEAAAARAAEISRKLKAEGFGADNMEEKH-----------AKGKSRSP----SPSTRRS 97
Query: 256 RSKSRSPVSFHRRRRSRSFSPPYRHRRGHRSRSPLRSRHYSKYDNERLSTRDTRDGADRS 315
+S+SRSP+ + R RRSRS+SPP R R RSRSP +SRH SKY ++R S RD +D RS
Sbjct: 98 KSRSRSPIKYRRSRRSRSYSPPVRRSREQRSRSPSKSRH-SKYGSDR-SHRDDKDRYSRS 155
Query: 316 -RRESDISHHSPVPRRRKSRSVSPHS--RKSYRSDSGSP-KHRQES---SARKSSRAHSK 368
RRES+ S R++RS S +K R DS SP K R+ES S +S+RA S+
Sbjct: 156 GRRESERSRDHHSSSSRRNRSKSRSPRHKKPSRVDSRSPKKQREESLSPSKSRSARAGSR 215
Query: 369 SPKRHRGNRNSPRND 383
SP+ H+G+++SP D
Sbjct: 216 SPRHHKGSKSSPTRD 230
>gi|91086291|ref|XP_973507.1| PREDICTED: similar to Srp54 CG4602-PA [Tribolium castaneum]
gi|270009855|gb|EFA06303.1| hypothetical protein TcasGA2_TC009171 [Tribolium castaneum]
Length = 526
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Query: 62 KADALKKTLQVSNLSPLLTVEQLRQLFSFCGT-----VVECTITDSKHFAYIEYSKPEEA 116
K + ++T+QV N+ P + +++ Q FS G V EC ++ H IE+++
Sbjct: 159 KVEETRRTVQVVNIDPAIPTDEIIQYFSQAGEVKYLRVCECPNDNTTHI-LIEFTEQPSV 217
Query: 117 TAALALNNMDVGGRPLNV 134
A+ +N + G+PL +
Sbjct: 218 VNAMKMNGEEFKGKPLEI 235
>gi|291242201|ref|XP_002740997.1| PREDICTED: splicing factor, arginine/serine-rich 12-like
[Saccoglossus kowalevskii]
Length = 574
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 57/151 (37%), Gaps = 37/151 (24%)
Query: 21 SAAAMAAAQAIVAAQALQAHAA--------QVQAQQSAKDLSGS--------PDKAG--- 61
S A M AA A A + A + Q L+G+ P A
Sbjct: 91 SKALMIAAPANAVAGLMPAPGGGLLPTPSQSILGQLPLAGLAGAAQITAPFDPTLAALGL 150
Query: 62 -------------KADALKKTLQVSNL-SPLLTVEQLRQLFSFCGTVVECTI----TDSK 103
K + +++T+ V NL S +T EQL FS G V + T
Sbjct: 151 PQPPPLPGNVDPSKIEEIRRTIYVGNLDSQTVTAEQLLNFFSQVGEVKYVRMAGDETQPT 210
Query: 104 HFAYIEYSKPEEATAALALNNMDVGGRPLNV 134
FA++E+S AAL N + GGRPL +
Sbjct: 211 RFAFVEFSDQNSVAAALTYNGVMFGGRPLKI 241
>gi|392342422|ref|XP_003754583.1| PREDICTED: LOW QUALITY PROTEIN: splicing regulatory
glutamine/lysine-rich protein 1-like [Rattus norvegicus]
Length = 775
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Query: 53 LSGSPDKAGKADALKKTLQVSNL-SPLLTVEQLRQLFSFCGTVVECTITDSK----HFAY 107
L+G+ D + + D +++T+ V NL S ++ +Q+ + F G V + D + FA+
Sbjct: 385 LTGNVDPS-RTDEIRRTIHVGNLNSQTMSADQILEFFKQVGEVKFFPMADDETQPTQFAF 443
Query: 108 IEYSKPEEATAALALNNMDVGGRPLNVEMAKSFPQKPSHL 147
+E++ ALA N + G R L + +++ KP +
Sbjct: 444 VEFADQNSVPRALAFNGVTFGDRGLKINHSQNAIVKPPEM 483
>gi|392350797|ref|XP_003750759.1| PREDICTED: LOW QUALITY PROTEIN: splicing regulatory
glutamine/lysine-rich protein 1-like [Rattus norvegicus]
Length = 775
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Query: 53 LSGSPDKAGKADALKKTLQVSNL-SPLLTVEQLRQLFSFCGTVVECTITDSK----HFAY 107
L+G+ D + + D +++T+ V NL S ++ +Q+ + F G V + D + FA+
Sbjct: 385 LTGNVDPS-RTDEIRRTIHVGNLNSQTMSADQILEFFKQVGEVKFFPMADDETQPTQFAF 443
Query: 108 IEYSKPEEATAALALNNMDVGGRPLNVEMAKSFPQKPSHL 147
+E++ ALA N + G R L + +++ KP +
Sbjct: 444 VEFADQNSVPRALAFNGVTFGDRGLKINHSQNAIVKPPEM 483
>gi|345322694|ref|XP_001505602.2| PREDICTED: serine/arginine-rich splicing factor 11-like
[Ornithorhynchus anatinus]
Length = 496
Score = 40.0 bits (92), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 8/75 (10%)
Query: 68 KTLQVSNLSPLLTVEQLRQLFSFCGTVVEC--------TITDSKHFAYIEYSKPEEATAA 119
+ +QV+N+SP + EQ+R LF F G + E + S ++++ P+ A A
Sbjct: 46 EVIQVTNVSPSASSEQMRTLFGFLGKIDELRLFPPDDSPLPVSSRVCFVKFHDPDSAVVA 105
Query: 120 LALNNMDVGGRPLNV 134
L N R L V
Sbjct: 106 QHLTNTVFVDRALIV 120
>gi|444516936|gb|ELV11314.1| Serine/arginine-rich splicing factor 11 [Tupaia chinensis]
Length = 452
Score = 39.7 bits (91), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 8/75 (10%)
Query: 68 KTLQVSNLSPLLTVEQLRQLFSFCGTVVEC--------TITDSKHFAYIEYSKPEEATAA 119
+ +QV+N+SP + EQ+R LF F G + E + S ++++ P+ A A
Sbjct: 32 EVIQVTNVSPSASSEQMRTLFGFLGKIDELRLFPPDDSPLPVSSRVCFVKFHDPDSAVVA 91
Query: 120 LALNNMDVGGRPLNV 134
L N R L V
Sbjct: 92 QHLTNTVFVDRALIV 106
>gi|427797867|gb|JAA64385.1| Putative splicing factor sr protein superfamily, partial
[Rhipicephalus pulchellus]
Length = 300
Score = 39.3 bits (90), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 69 TLQVSNLSPLLTVEQLRQLFSFCGTVVECTIT------DSKHFAYIEYSKPEEATAAL-A 121
+L+V NL+ T E L+++F G V + I +S+ FA++ + + A+ A
Sbjct: 15 SLKVDNLTYRTTPEDLKRVFERYGDVGDVYIPRHPYTRESRGFAFVRFYDKRDCEDAMDA 74
Query: 122 LNNMDVGGRPLNVEMAK 138
L+ + GR L V+MA+
Sbjct: 75 LDGYMMDGRELRVQMAR 91
>gi|395821914|ref|XP_003784274.1| PREDICTED: serine/arginine-rich splicing factor 11 [Otolemur
garnettii]
Length = 480
Score = 38.9 bits (89), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 8/75 (10%)
Query: 68 KTLQVSNLSPLLTVEQLRQLFSFCGTVVEC--------TITDSKHFAYIEYSKPEEATAA 119
+ +QV+N+SP + EQ+R LF F G + E + S ++++ P+ A A
Sbjct: 30 EVIQVTNVSPSASSEQMRTLFGFLGKIDELRLFPPDDSPLPVSSRVCFVKFHDPDSAVVA 89
Query: 120 LALNNMDVGGRPLNV 134
L N R L V
Sbjct: 90 QHLTNTVFVDRALIV 104
>gi|340716414|ref|XP_003396693.1| PREDICTED: probable splicing factor, arginine/serine-rich 7-like
[Bombus terrestris]
Length = 487
Score = 38.9 bits (89), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 62 KADALKKTLQVSNLSPLLTVEQLRQLFSFCGTVVE----CT-ITDSKHFAYIEYSKPEEA 116
+ + +++TL ++NL P +T + L FS V+ CT +D++H+A +E S+
Sbjct: 159 RIEEIRRTLVLANLDPSVTTDHLLDFFSNNNVEVKYLRMCTRDSDTEHYALVELSEQAAV 218
Query: 117 TAALALNNMDVGGRPLNV 134
+AL LN + RP+ +
Sbjct: 219 VSALLLNGKLLMDRPIKI 236
>gi|312381256|gb|EFR27046.1| hypothetical protein AND_06483 [Anopheles darlingi]
Length = 749
Score = 38.9 bits (89), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
Query: 67 KKTLQVSNLSPLLTVEQLRQLFSFCGTVVECTIT------DSKHFAYIEYS-KPEEATAA 119
+ L V L+P+ L+ +FS G +V C + DS +A+IE+ K TA
Sbjct: 239 ENVLFVCKLNPVTADSDLQIIFSRFGKIVGCEVIRDKVTGDSLQYAFIEFEDKKSCETAY 298
Query: 120 LALNNMDVGGRPLNVEMAKS 139
++N+ + R ++V+ ++S
Sbjct: 299 FKMDNVLIDDRRIHVDFSQS 318
>gi|350406337|ref|XP_003487737.1| PREDICTED: probable splicing factor, arginine/serine-rich 7-like
[Bombus impatiens]
Length = 487
Score = 38.9 bits (89), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 62 KADALKKTLQVSNLSPLLTVEQLRQLFSFCGTVVE----CT-ITDSKHFAYIEYSKPEEA 116
+ + +++TL ++NL P +T + L FS V+ CT +D++H+A +E S+
Sbjct: 159 RIEEIRRTLVLANLDPSVTTDHLLDFFSNNNVEVKYLRMCTRDSDTEHYALVELSEQAAV 218
Query: 117 TAALALNNMDVGGRPLNV 134
+AL LN + RP+ +
Sbjct: 219 VSALLLNGKLLMDRPIKI 236
>gi|156554641|ref|XP_001605226.1| PREDICTED: probable splicing factor, arginine/serine-rich 7-like
[Nasonia vitripennis]
Length = 501
Score = 38.9 bits (89), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 62 KADALKKTLQVSNLSPLLTVEQLRQLFSFCGTVVE----CT-ITDSKHFAYIEYSKPEEA 116
K + +++TL V NL T +QL + F V+ CT +D+ H+A +E+S+
Sbjct: 160 KIEEIRRTLVVGNLDASTTDQQLIEFFGNHNVEVKYTRLCTRDSDTDHYALVEFSEQASI 219
Query: 117 TAALALNNMDVGGRPLNV 134
AL LN + RP+ +
Sbjct: 220 VPALQLNGQMLNDRPIKI 237
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.310 0.121 0.330
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,507,250,468
Number of Sequences: 23463169
Number of extensions: 384395253
Number of successful extensions: 2902856
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 7938
Number of HSP's successfully gapped in prelim test: 41973
Number of HSP's that attempted gapping in prelim test: 1875853
Number of HSP's gapped (non-prelim): 370345
length of query: 682
length of database: 8,064,228,071
effective HSP length: 150
effective length of query: 532
effective length of database: 8,839,720,017
effective search space: 4702731049044
effective search space used: 4702731049044
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 81 (35.8 bits)