Query 005700
Match_columns 682
No_of_seqs 585 out of 3888
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 04:59:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005700.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005700hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hg6_A Cellulose synthase subu 100.0 8.2E-40 2.8E-44 387.3 35.0 415 143-583 71-512 (802)
2 3bcv_A Putative glycosyltransf 99.9 7.1E-24 2.4E-28 214.1 14.8 205 219-435 3-222 (240)
3 1qg8_A Protein (spore coat pol 99.9 1.9E-24 6.4E-29 220.6 10.3 214 221-456 1-235 (255)
4 1xhb_A Polypeptide N-acetylgal 99.9 1.2E-23 4E-28 235.1 17.3 243 218-468 26-301 (472)
5 2z86_A Chondroitin synthase; G 99.9 2.8E-22 9.6E-27 231.6 21.4 220 218-446 90-338 (625)
6 2d7i_A Polypeptide N-acetylgal 99.9 1.1E-22 3.7E-27 232.4 15.6 240 218-466 109-377 (570)
7 2ffu_A Ppgalnact-2, polypeptid 99.9 1.4E-21 4.6E-26 220.1 16.6 237 218-466 63-331 (501)
8 2z86_A Chondroitin synthase; G 99.9 1.9E-21 6.6E-26 224.6 14.1 218 218-456 372-593 (625)
9 4fix_A UDP-galactofuranosyl tr 99.8 5E-21 1.7E-25 221.0 13.9 215 219-440 178-419 (657)
10 3ckj_A Putative uncharacterize 99.8 3.5E-20 1.2E-24 197.3 17.6 203 218-437 45-263 (329)
11 3l7i_A Teichoic acid biosynthe 99.8 4E-20 1.4E-24 217.4 0.0 199 220-434 1-202 (729)
12 3f1y_A Mannosyl-3-phosphoglyce 99.7 2.4E-17 8E-22 178.8 18.9 198 219-436 92-307 (387)
13 2nxv_A ATP synthase subunits r 99.7 1.5E-16 5.3E-21 162.4 15.7 184 219-439 14-204 (249)
14 2fy7_A Beta-1,4-galactosyltran 99.7 1.5E-17 5E-22 173.3 5.5 179 219-461 63-263 (287)
15 2bo4_A Mannosylglycerate synth 99.5 2.8E-13 9.5E-18 146.8 14.4 196 225-433 4-212 (397)
16 2wvl_A Mannosyl-3-phosphoglyce 99.0 1E-09 3.5E-14 114.0 11.4 105 220-332 52-180 (391)
17 1fo8_A Alpha-1,3-mannosyl-glyc 98.7 3.4E-08 1.1E-12 104.6 10.2 197 221-449 2-225 (343)
18 2zu9_A Mannosyl-3-phosphoglyce 98.7 3.7E-08 1.3E-12 105.2 10.1 109 221-337 51-185 (394)
19 3lw6_A FI08434P, beta-4-galact 97.4 0.00045 1.5E-08 69.8 9.1 181 219-462 49-251 (287)
20 2c0n_A A197; thermophil protei 95.0 0.043 1.5E-06 52.3 6.9 103 309-427 51-165 (203)
21 4fcu_A 3-deoxy-manno-octuloson 92.3 0.89 3.1E-05 45.5 11.5 94 233-341 26-121 (253)
22 3cu0_A Galactosylgalactosylxyl 92.1 1.1 3.7E-05 45.1 11.6 104 218-332 18-153 (281)
23 1v84_A Galactosylgalactosylxyl 91.6 0.77 2.6E-05 45.7 9.8 102 220-332 2-127 (253)
24 2d0j_A Galactosylgalactosylxyl 90.6 1.6 5.5E-05 43.2 10.9 102 220-332 2-121 (246)
25 3tqd_A 3-deoxy-manno-octuloson 90.4 2.2 7.6E-05 42.6 12.2 183 234-432 35-235 (256)
26 3k8d_A 3-deoxy-manno-octuloson 86.1 6.8 0.00023 39.2 12.5 177 234-430 44-240 (264)
27 1omz_A Alpha-1,4-N-acetylhexos 85.2 3.2 0.00011 42.3 9.5 116 219-348 26-142 (293)
28 2waw_A MOBA relate protein; un 83.1 7.5 0.00026 36.2 10.8 90 232-335 30-120 (199)
29 3oam_A 3-deoxy-manno-octuloson 82.9 11 0.00037 37.2 12.3 91 233-338 27-118 (252)
30 1qwj_A Cytidine monophospho-N- 82.8 26 0.00089 33.6 14.9 93 233-339 28-123 (229)
31 2wee_A MOBA-related protein; u 80.3 7.9 0.00027 36.0 9.8 90 232-335 30-120 (197)
32 2y6p_A 3-deoxy-manno-octuloson 79.5 12 0.00042 35.8 11.2 90 232-341 26-116 (234)
33 3st8_A Bifunctional protein GL 73.2 19 0.00066 39.3 11.7 104 226-338 34-138 (501)
34 1h7e_A 3-deoxy-manno-octuloson 71.0 32 0.0011 33.1 11.7 92 231-339 25-117 (245)
35 3f1c_A Putative 2-C-methyl-D-e 70.1 13 0.00043 36.4 8.5 98 232-339 31-133 (246)
36 1vic_A 3-deoxy-manno-octuloson 69.6 28 0.00096 34.1 11.0 92 232-338 26-118 (262)
37 3q80_A 2-C-methyl-D-erythritol 66.7 26 0.00088 34.1 9.8 92 231-338 33-127 (231)
38 1ezi_A CMP-N-acetylneuraminic 65.6 28 0.00097 33.2 9.9 92 232-338 28-124 (228)
39 3ngw_A Molybdopterin-guanine d 65.0 24 0.00082 33.7 9.1 86 231-338 24-110 (208)
40 2qh5_A PMI, ALGA, mannose-6-ph 63.4 38 0.0013 34.2 10.8 95 227-335 31-128 (308)
41 3juk_A UDP-glucose pyrophospho 63.1 6.8 0.00023 39.2 4.9 102 227-338 28-151 (281)
42 1vgw_A 4-diphosphocytidyl-2C-m 61.3 63 0.0022 30.5 11.5 96 231-339 32-132 (231)
43 2j0a_A Beta-1,3-N-acetylglucos 60.5 5.8 0.0002 40.1 3.8 108 310-431 92-210 (280)
44 4fce_A Bifunctional protein GL 60.0 44 0.0015 35.6 11.1 90 233-338 36-126 (459)
45 1e5k_A Molybdopterin-guanine d 58.6 25 0.00087 33.1 7.9 84 232-335 32-116 (201)
46 2vsh_A TARI, 2-C-methyl-D-eryt 57.4 28 0.00097 33.1 8.2 98 232-339 30-134 (236)
47 3pnn_A Conserved domain protei 53.4 67 0.0023 32.3 10.6 100 226-338 25-141 (303)
48 2v0h_A Bifunctional protein GL 53.0 72 0.0025 33.8 11.3 90 233-338 33-123 (456)
49 3d5n_A Q97W15_sulso; NESG, SSR 52.9 15 0.00051 34.6 5.1 39 296-336 73-112 (197)
50 3tzt_A Glycosyl transferase fa 52.0 63 0.0022 32.2 9.9 100 222-326 5-115 (276)
51 3rsb_A Adenosylcobinamide-phos 51.0 29 0.001 32.1 6.9 93 232-338 26-119 (196)
52 1i52_A 4-diphosphocytidyl-2-C- 49.6 51 0.0017 31.5 8.6 93 232-339 34-127 (236)
53 2yc3_A 2-C-methyl-D-erythritol 47.2 56 0.0019 30.9 8.4 93 233-338 32-125 (228)
54 2ux8_A Glucose-1-phosphate uri 46.8 22 0.00076 35.7 5.6 103 227-338 40-160 (297)
55 4ecm_A Glucose-1-phosphate thy 46.1 35 0.0012 33.6 6.9 95 232-338 54-148 (269)
56 2xwl_A 2-C-methyl-D-erythritol 43.7 99 0.0034 28.9 9.6 89 232-336 29-118 (223)
57 2pa4_A UTP-glucose-1-phosphate 42.0 46 0.0016 33.9 7.2 57 281-339 104-161 (323)
58 1g9r_A Glycosyl transferase; a 39.0 50 0.0017 33.5 6.8 89 234-327 13-111 (311)
59 2e3d_A UTP--glucose-1-phosphat 36.8 53 0.0018 32.8 6.6 103 227-338 34-161 (302)
60 1hm9_A GLMU, UDP-N-acetylgluco 36.3 76 0.0026 33.8 8.2 95 227-338 34-129 (468)
61 1lvw_A Glucose-1-phosphate thy 36.2 1E+02 0.0036 30.8 8.7 98 227-337 29-127 (295)
62 2e8b_A Probable molybdopterin- 32.0 1.3E+02 0.0046 27.8 8.2 78 234-333 41-120 (201)
63 1fxo_A Glucose-1-phosphate thy 30.7 90 0.0031 31.2 7.1 98 227-337 28-126 (293)
64 1w55_A ISPD/ISPF bifunctional 30.5 1.9E+02 0.0066 30.0 9.8 87 232-339 30-117 (371)
65 3cgx_A Putative nucleotide-dip 29.1 3.6E+02 0.012 25.9 11.0 47 292-338 83-130 (242)
66 1mc3_A Glucose-1-phosphate thy 25.5 1.2E+02 0.004 30.4 6.9 98 227-337 29-127 (296)
67 1ll2_A Glycogenin-1; protein-s 23.3 3E+02 0.01 28.0 9.6 89 229-326 10-109 (333)
68 2xme_A CTP-inositol-1-phosphat 20.1 1.2E+02 0.0042 28.6 5.6 86 233-334 45-130 (232)
No 1
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=100.00 E-value=8.2e-40 Score=387.30 Aligned_cols=415 Identities=24% Similarity=0.340 Sum_probs=267.4
Q ss_pred hhhhhhHHHHHHHHHhHHHhhchhH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCccccCCCCCC
Q 005700 143 AIKGAFDLLYSSWVLVRVHYLAPPL--QFLANACIVLFLIQSLDRLILCLGCFWIRFKRIKPVPKHDDTSDLESGQKGFF 220 (682)
Q Consensus 143 ~~~~~~~~~y~~W~~~r~~~~~~~l--~~l~~~~~~lfli~~~~~l~~~~~~~~~~~~r~rp~~~~~~~~~~~~~~~~~~ 220 (682)
.+......+|.+| |....++.. .+...+.+.++++..+..+...+..+.. .++.++... ++ ...+..
T Consensus 71 ~~~~~~~~~y~~w---r~~~tl~~~~~~~~~~~~~~ll~~~~~~~~~~l~~~~~~----~~~~~r~~~-~~---~~~~~~ 139 (802)
T 4hg6_A 71 SAASMLVMRYWFW---RLFETLPPPALDASFLFALLLFAVETFSISIFFLNGFLS----ADPTDRPFP-RP---LQPEEL 139 (802)
T ss_dssp HHHHHHHHHHHHH---HHHHTSCCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHT----TSCCCCCCC-CC---CCTTTC
T ss_pred HHHHHHHHHHHHH---HhheecCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHH----hcccCCCCC-CC---CCccCC
Confidence 4445566788888 888877643 2222233333333333333333332221 122111111 00 112568
Q ss_pred CeEEEEeecCCchHH-HHHHHHHHHcCCCCCCceEEEEEcCCCChhHH-----HHHHHH------HHHH-hhcCCeEEEE
Q 005700 221 PMVLVQIPMCNEKEV-YQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQ-----TLIKEE------VLKW-QEAGANIVYR 287 (682)
Q Consensus 221 P~VsVvIP~yNE~~~-l~~tL~Sl~~qdYP~~~l~ViVvDD~sdd~t~-----~~l~~~------~~~~-~~~~v~v~~~ 287 (682)
|+|||+||+|||++. +++||+|+.+|+||+++++|+|+||||+|++. +.+++. .+++ .+.++ .+.
T Consensus 140 P~VSViIPtyNe~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~T~~~~d~~i~~~~~~~~~~l~~~~~~~~v--~~i 217 (802)
T 4hg6_A 140 PTVDILVPSYNEPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMSPDPELAQKAQERRRELQQLCRELGV--VYS 217 (802)
T ss_dssp CCEEEEEECTTCCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHTC--EEE
T ss_pred CcEEEEEEECCCCHHHHHHHHHHHHhccCCCCcEEEEEEECCCCccccccCCHHHHHHHHhhhHHHHHHHHhcCc--EEE
Confidence 999999999999955 59999999999999988999999999998883 222211 1111 13344 455
Q ss_pred eccCCCCcchhhHHHHHhhcccCCccEEEEEcCCCCCCHHHHHHHHHHhhcCCCeeEEEeeeEeecCCCChHHHhhhh--
Q 005700 288 HRILRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDI-- 365 (682)
Q Consensus 288 ~r~~~~g~KagaLn~gl~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~~~~~p~vg~Vqg~~~~~n~~~~l~t~~~~~-- 365 (682)
.+++++++|++|+|.|++ .+++|||+++|+|+.++||++++++..|+++|++++|+++..+.|.+. ........
T Consensus 218 ~~~~~~~GKa~alN~gl~---~a~gd~Il~lDaD~~~~pd~L~~lv~~~~~dp~v~~V~~~~~~~~~~~-~~~~~~~~~~ 293 (802)
T 4hg6_A 218 TRERNEHAKAGNMSAALE---RLKGELVVVFDADHVPSRDFLARTVGYFVEDPDLFLVQTPHFFINPDP-IQRNLALGDR 293 (802)
T ss_dssp ECSSCCSHHHHHHHHHHH---HCCCSEEEECCTTEEECTTHHHHHHHHHHHSSSCCEEECCCCBSSCCH-HHHHHTCCTT
T ss_pred EecCCCCcchHHHHHHHH---hcCCCEEEEECCCCCcChHHHHHHHHHHhcCCCeEEEeccEEEeCCch-HhhhhhHHhh
Confidence 667777779999999999 579999999999999999999999999987899999999988777641 11111110
Q ss_pred ---hhhhhhHHHHhhccccccccccccceEEEEeeeehhcCCCCCCCchhHHHHHHHHHHcCCeEEEecCceeeeccCcC
Q 005700 366 ---NLSFHFEVEQQVNGVFINFFGFNGTAGVWRIKALEDSGGWMERTTVEDMDIAVRAHLRGWKFIFLNDVECQCELPES 442 (682)
Q Consensus 366 ---~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al~~iGG~~~~~~~ED~~l~~rl~~~G~ki~y~~~a~~~~e~p~t 442 (682)
+....+...+....... ..+++|+++++||++++++|||++...+||.+++.++.++||++.|+|++.++++.|.|
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~-~~~~~G~~~~~Rr~al~~vGgf~~~~~~ED~~l~~rl~~~G~ri~~~~~~~~~~~~p~t 372 (802)
T 4hg6_A 294 CPPENEMFYGKIHRGLDRWG-GAFFCGSAAVLRRRALDEAGGFAGETITEDAETALEIHSRGWKSLYIDRAMIAGLQPET 372 (802)
T ss_dssp SCCTTHHHHHTHHHHHHHTT-CCCCCSSSEEEEHHHHHHHTTCCCSSSSHHHHHHHHHHTTTCCEEECCCCCEEECCCCS
T ss_pred hhHHHHHHHHHHHhhHhhcC-CceecccchhhhHHHHHHcCCcCCCCcchHHHHHHHHHHcCCeEEEecCCEEEecCCCC
Confidence 01111111111111111 12268999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhHhhhchhhHHHHHhchhhhhcCCCcchhHHHHHHHHHHHHHHHH-HHHHH---HHHHHHhhhhccccchhhH
Q 005700 443 YEAYRKQQHRWHSGPMQLFRLCLPDIIRAKISMGKKFNLIFLFFLLRKLILP-FYSFT---LFCIILPMTMFIPEAELPA 518 (682)
Q Consensus 443 ~~~~~~Qr~RW~~G~~~~~~~~~~~~l~~~l~~~~k~~~l~~~~ll~~li~p-~~~f~---~~~vilp~~~~~~~~~l~~ 518 (682)
++++++||+||.+|.+|.++.+.+ +..+++.+.++..++..+.. .++.+ ...+. +++++... ... ......
T Consensus 373 ~~~~~~Qr~RW~~G~~q~l~~~~p-l~~~~l~~~~rl~~l~~~~~--~~~~~~~li~ll~p~~~ll~~~-~~~-~~~~~~ 447 (802)
T 4hg6_A 373 FASFIQQRGRWATGMMQMLLLKNP-LFRRGLGIAQRLCYLNSMSF--WFFPLVRMMFLVAPLIYLFFGI-EIF-VATFEE 447 (802)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCT-TSCSSCCHHHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHCC-CCS-CCCHHH
T ss_pred HHHHHHHHHHHHccHHHHHHHhCc-cccCCCCHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhH-HHh-hcCHHH
Confidence 999999999999999999987643 44455666666555432221 11111 01111 11111111 111 111122
Q ss_pred HHHHHHHHH---HHHHHhccCCCcchhHHHHHHHHHhHHHHHHHHHHHHHhhcCCcccEEeccCCCCC
Q 005700 519 WVVCYIPAT---MSFLNILPAPKSFPFIVPYLLFENTMSVTKFNAMISGLFQLGSAYEWVVTKKSGRS 583 (682)
Q Consensus 519 ~~~~~ip~~---~~ll~~~~~~~~~~~~~~~llf~~~~s~~~~~a~l~gl~~~~~~~~W~~T~K~~~~ 583 (682)
+...++|.+ +.+.........+. +...+++..++++.+.+++.+++. .+..+|.+|+|+++.
T Consensus 448 ~~~~~lp~~l~~~~~~~~~~~~~r~~--~~~~l~~~~~~~~~~~a~l~~l~~-~~~~~f~VT~Kg~~~ 512 (802)
T 4hg6_A 448 VLAYMPGYLAVSFLVQNALFARQRWP--LVSEVYEVAQAPYLARAIVTTLLR-PRSARFAVTAKDETL 512 (802)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTSCT--THHHHHHHHHHHHHHHHHHHHHHS-TTCCCCCCCCCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcHHH--HHHHHHHHHHHHHHHHHHHHHHhC-CCCCcceECCCCccc
Confidence 222223322 22222333333333 234567777888889999999996 456799999997654
No 2
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=99.90 E-value=7.1e-24 Score=214.08 Aligned_cols=205 Identities=16% Similarity=0.148 Sum_probs=141.8
Q ss_pred CCCeEEEEeecCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCCeEEEEeccCCCCcchh
Q 005700 219 FFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAG 298 (682)
Q Consensus 219 ~~P~VsVvIP~yNE~~~l~~tL~Sl~~qdYP~~~l~ViVvDD~sdd~t~~~l~~~~~~~~~~~v~v~~~~r~~~~g~Kag 298 (682)
..|+|||+||+||+++.+.+||+|+++|+||+ ++|+|+||+|+|.+.+++++..++ ..++.+++ .++.| ++.
T Consensus 3 ~~p~vsViIp~yn~~~~l~~~l~Sl~~q~~~~--~eiIvvDd~S~d~t~~~~~~~~~~----~~~i~~i~-~~n~G-~~~ 74 (240)
T 3bcv_A 3 LIPKVSVIVPIYNVEKYLDQCVQALLAQTLSD--IEIILIDDESPDNCPKICDDYAAQ----YPNIKVIH-KKNAG-LGM 74 (240)
T ss_dssp CCCSEEEEEEESSCTTTHHHHHHHHHTCSSSS--EEEEEEECCCSSSHHHHHHHHHHH----CSSEEEEE-CCCCC-HHH
T ss_pred CCCcEEEEEecCCCHHHHHHHHHHHHhCcCCC--eEEEEEECCCCcCHHHHHHHHHhh----CCCEEEEE-CCCCC-hHH
Confidence 46899999999999999999999999999984 779999999999999888866543 33455554 34445 999
Q ss_pred hHHHHHhhcccCCccEEEEEcCCCCCCHHHHHHHHHHhhcCCCeeEEEeeeEeecCCCChHHHhhhh---hhhhh-hHHH
Q 005700 299 NLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDI---NLSFH-FEVE 374 (682)
Q Consensus 299 aLn~gl~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~~~~~p~vg~Vqg~~~~~n~~~~l~t~~~~~---~~~~~-~~~~ 374 (682)
|+|.|++ .+++|||+++|+|+.++|++|++++..+++ ++.+++.+.....+.+......+... ...+. ....
T Consensus 75 a~N~g~~---~a~g~~i~~lD~Dd~~~~~~l~~l~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (240)
T 3bcv_A 75 ACNSGLD---VATGEYVAFCDSDDYVDSDMYMTMYNVAQK-YTCDAVFTGLKRITMAGIPTGTVTHQKEFKLYKNKNEIH 150 (240)
T ss_dssp HHHHHHH---HCCSSEEEECCTTCCCCTTHHHHHHHHHHH-HTCSEEEC--------------------CEEECSHHHHH
T ss_pred HHHHHHH---HcCCCEEEEECCCCcCCHHHHHHHHHHHHh-cCCCEEEEeeEEEccCCccccccccccccccccCHHHHH
Confidence 9999999 579999999999999999999999999986 34455554433333222100000000 00000 0000
Q ss_pred Hhhccccc--------cccccccceEEEEeeeehhcC-CCCCC--CchhHHHHHHHHHHcCCeEEEecCcee
Q 005700 375 QQVNGVFI--------NFFGFNGTAGVWRIKALEDSG-GWMER--TTVEDMDIAVRAHLRGWKFIFLNDVEC 435 (682)
Q Consensus 375 ~~~~~~~~--------~~~~~~G~~~~~Rr~al~~iG-G~~~~--~~~ED~~l~~rl~~~G~ki~y~~~a~~ 435 (682)
........ .....+|+++++||++++++| ||++. ...||.++++|+.++|+++.++|++..
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~g~~f~~~~~~~~eD~~~~~r~~~~g~~i~~~~~~~~ 222 (240)
T 3bcv_A 151 TLLKDLIASDPYAREERAIQVSAKVVLYRRNLIEKKHLRFVSERILPSEDLIFNVDVLANSNIVCVLPQTFY 222 (240)
T ss_dssp HHHGGGTSSCHHHHHHHHHHHTCSCEEEEHHHHHHTTCCCCCTTTCTTHHHHHHHHHHTTCSCEEECC----
T ss_pred HHHHHHhhcchhhccccccccchhheeeeHHHHHHcCCccCCCCCccCCCHHHHHHHHHhCCEEEEECCCeE
Confidence 01111110 011246788999999999999 89886 458999999999999999999998864
No 3
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=99.90 E-value=1.9e-24 Score=220.60 Aligned_cols=214 Identities=14% Similarity=0.160 Sum_probs=154.4
Q ss_pred CeEEEEeecCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCCeEEEEecc--------CC
Q 005700 221 PMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRI--------LR 292 (682)
Q Consensus 221 P~VsVvIP~yNE~~~l~~tL~Sl~~qdYP~~~l~ViVvDD~sdd~t~~~l~~~~~~~~~~~v~v~~~~r~--------~~ 292 (682)
|+|||+||+||+++.+.+||+|+.+|+||+ ++|+|+||+|+|.+.+++++.. . ..++.++..+ .+
T Consensus 1 p~vSViIp~yn~~~~l~~~l~Sl~~q~~~~--~eiivvDd~S~d~t~~~~~~~~----~-~~~i~~i~~~~~~~~~~~~n 73 (255)
T 1qg8_A 1 PKVSVIMTSYNKSDYVAKSISSILSQTFSD--FELFIMDDNSNEETLNVIRPFL----N-DNRVRFYQSDISGVKERTEK 73 (255)
T ss_dssp CCEEEEEEESSCTTTHHHHHHHHHTCSCCC--EEEEEEECSCCHHHHHHHGGGG----G-STTEEEEECCCCSHHHHHSS
T ss_pred CeEEEEEEcCCCHHHHHHHHHHHHhccCCc--eEEEEEECCCCchHHHHHHHHh----h-cCCEEEEecccccccccccc
Confidence 689999999999999999999999999984 7799999999999998877432 2 4556666555 44
Q ss_pred CCcchhhHHHHHhhcccCCccEEEEEcCCCCCCHHHHHHHHHHhhcCCCeeEEEeeeEee--cCCCChHHHhhhhhhhhh
Q 005700 293 DGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFV--NKDENLLTRLQDINLSFH 370 (682)
Q Consensus 293 ~g~KagaLn~gl~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~~~~~p~vg~Vqg~~~~~--n~~~~l~t~~~~~~~~~~ 370 (682)
.| ++.|+|.|++ .+++|||+++|+|+.++|++|++++..+.++|++++|.+..... +.+...........
T Consensus 74 ~G-~~~a~N~gi~---~a~g~~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~---- 145 (255)
T 1qg8_A 74 TR-YAALINQAIE---MAEGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVIYSASKTYHLNENRDIVKETVRPA---- 145 (255)
T ss_dssp CH-HHHHHHHHHH---HCCCSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEEEEEEEEEEEC---CEEEEEEECC----
T ss_pred cC-HHHHHHHHHH---HcCCCEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEeceEEEEeCCCCcchhhccCch----
Confidence 44 9999999999 57999999999999999999999999999889999999987665 44322111100000
Q ss_pred hHHHHhhccccccccccccceEEEEeeeehhcC-CC------CCC-CchhHHHHHHHHHHcCCeEEEecCceee-eccCc
Q 005700 371 FEVEQQVNGVFINFFGFNGTAGVWRIKALEDSG-GW------MER-TTVEDMDIAVRAHLRGWKFIFLNDVECQ-CELPE 441 (682)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~G~~~~~Rr~al~~iG-G~------~~~-~~~ED~~l~~rl~~~G~ki~y~~~a~~~-~e~p~ 441 (682)
..... .....+.|+++++||++++++| || ++. ...||.+++.++.++| ++.++|++.+. ...+.
T Consensus 146 ----~~~~~--~~~~~~~~~~~~~rr~~~~~~g~~f~~~~~~~~~~~~~eD~~~~~r~~~~g-~~~~~~~~~~~~r~~~~ 218 (255)
T 1qg8_A 146 ----AQVTW--NAPCAIDHCSVMHRYSVLEKVKEKFGSYWDESPAFYRIGDARFFWRVNHFY-PFYPLDEELDLNYITDQ 218 (255)
T ss_dssp ----CSCBS--CCTTTSCGGGEEEETHHHHHHHHHHSSSSCCCGGGSTTHHHHHHHHHTTTC-CBEEEEEEEEEEEEC--
T ss_pred ----HHHHH--hhcCCCccceEEEEHHHHHhhcccccccccCCcccchHHHHHHHHHHHHhC-CEEEecCcEEEEEEcCC
Confidence 00000 1222367899999999999998 77 333 4689999999999987 69999998854 33455
Q ss_pred CHHH--HHHHhHhhhch
Q 005700 442 SYEA--YRKQQHRWHSG 456 (682)
Q Consensus 442 t~~~--~~~Qr~RW~~G 456 (682)
+... ..+++.+|.+.
T Consensus 219 s~s~~~~~~~~~~~~~~ 235 (255)
T 1qg8_A 219 SIHFQLFELEKNEFVRN 235 (255)
T ss_dssp ------------CTGGG
T ss_pred ccchhHHHHHHHHHHHh
Confidence 5443 33556666554
No 4
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=99.90 E-value=1.2e-23 Score=235.06 Aligned_cols=243 Identities=13% Similarity=0.145 Sum_probs=175.3
Q ss_pred CCCCeEEEEeecCCch-HHHHHHHHHHHcCCCCCCceEEEEEcCCCCh-hHHHHHHHHHHHHhhcCCeEEEEeccCCCCc
Q 005700 218 GFFPMVLVQIPMCNEK-EVYQQSIAAVCNLDWPKSKILIQVLDDSDDP-TAQTLIKEEVLKWQEAGANIVYRHRILRDGY 295 (682)
Q Consensus 218 ~~~P~VsVvIP~yNE~-~~l~~tL~Sl~~qdYP~~~l~ViVvDD~sdd-~t~~~l~~~~~~~~~~~v~v~~~~r~~~~g~ 295 (682)
...|+|||+||+|||+ +.+.+||+|+.+|+||+..++|+||||+|+| .+.+.+++..+ ..+.++.+++.+.+.|
T Consensus 26 ~~~p~vSVIIp~yN~~~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~~~l~~~~~---~~~~~v~vi~~~~n~G- 101 (472)
T 1xhb_A 26 DNLPTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYVK---KLKVPVHVIRMEQRSG- 101 (472)
T ss_dssp SCCCCEEEEEEESSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHHHHH---SSSSCEEEEECSSCCC-
T ss_pred cCCCCeEEEEEeCCCCHHHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHHHHHHHHHH---HCCCcEEEEECCCCCC-
Confidence 4689999999999999 9999999999999998765789999999987 58888876544 2222567776666677
Q ss_pred chhhHHHHHhhcccCCccEEEEEcCCCCCCHHHHHHHHHHhhcCCCeeEEEeeeEeecCCCChHH---Hhh--hhhhhhh
Q 005700 296 KAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLT---RLQ--DINLSFH 370 (682)
Q Consensus 296 KagaLn~gl~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~~~~~p~vg~Vqg~~~~~n~~~~l~t---~~~--~~~~~~~ 370 (682)
++.|+|.|++ .+++|||+++|+|+.++|++|+.++..++++++.+++ +.....+.+..... ... .+.....
T Consensus 102 ~~~a~N~g~~---~A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~~v~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (472)
T 1xhb_A 102 LIRARLKGAA---VSRGQVITFLDAHCECTAGWLEPLLARIKHDRRTVVC-PIIDVISDDTFEYMAGSDMTYGGFNWKLN 177 (472)
T ss_dssp HHHHHHHHHH---HCCSSEEEEEESSEEECTTCHHHHHHHHHHCTTEEEE-EEEEEECSSSCCEECCCTTEEEEECTTCC
T ss_pred hHHHHHHHHH---hccCCeEEEECCCeEeCccHHHHHHHHHHhCCCEEEE-eeeeeEcCCCceeccCCCcccceeeccce
Confidence 9999999999 5789999999999999999999999999988876544 43333333211000 000 0000000
Q ss_pred h-----HH-HH--hh-c-cccccccccccceEEEEeeeehhcCCCCCCCc---hhHHHHHHHHHHcCCeEEEecCceeee
Q 005700 371 F-----EV-EQ--QV-N-GVFINFFGFNGTAGVWRIKALEDSGGWMERTT---VEDMDIAVRAHLRGWKFIFLNDVECQC 437 (682)
Q Consensus 371 ~-----~~-~~--~~-~-~~~~~~~~~~G~~~~~Rr~al~~iGG~~~~~~---~ED~~l~~rl~~~G~ki~y~~~a~~~~ 437 (682)
+ .. +. .. . ........+.|+++++||++++++|||++... +||.|+++|+.+.|+++.++|.+.+.+
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfde~~~~~g~ED~dl~~R~~~~G~~i~~~p~~~v~H 257 (472)
T 1xhb_A 178 FRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRDYFQEIGTYDAGMDIWGGENLEISFRIWQCGGTLEIVTCSHVGH 257 (472)
T ss_dssp EEEEECCHHHHHHTTTCTTSCEECSBCCSSSEEEEHHHHHHTTSCCTTSCTTCCCCSHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred eecccCCHHHHhcccCCCCCcccCccccceeEEEEHHHHHHcCCCCCcccccCchhHHHHHHHHhcCCeEEEccCcEEEE
Confidence 0 00 00 00 0 00112233679999999999999999998754 699999999999999999999999877
Q ss_pred ccCcC-------------HHHHHHHhHhhhchhhHHHHHhchhh
Q 005700 438 ELPES-------------YEAYRKQQHRWHSGPMQLFRLCLPDI 468 (682)
Q Consensus 438 e~p~t-------------~~~~~~Qr~RW~~G~~~~~~~~~~~~ 468 (682)
....+ .+...+...+|..+..+.+....+..
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~n~~r~~~~W~d~~~~~~~~~~p~~ 301 (472)
T 1xhb_A 258 VFRKATPYTFPGGTGQIINKNNRRLAEVWMDEFKNFFYIISPGV 301 (472)
T ss_dssp EC------------CHHHHHHHHHHHHHHCGGGGHHHHHTSTTG
T ss_pred EccCcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhCccc
Confidence 54332 23555666789988877776655543
No 5
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.89 E-value=2.8e-22 Score=231.64 Aligned_cols=220 Identities=20% Similarity=0.218 Sum_probs=163.7
Q ss_pred CCCCeEEEEeecCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCCeEEEEeccCCCCcch
Q 005700 218 GFFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKA 297 (682)
Q Consensus 218 ~~~P~VsVvIP~yNE~~~l~~tL~Sl~~qdYP~~~l~ViVvDD~sdd~t~~~l~~~~~~~~~~~v~v~~~~r~~~~g~Ka 297 (682)
...|.|||+||+|||++.+.+||+|+.+|++|. .++|+|+||+|+|.+.+++++.. ...++.++..+++.++++
T Consensus 90 ~~~p~vsviIp~~n~~~~l~~~l~sl~~q~~~~-~~eiivvDd~s~d~t~~~~~~~~-----~~~~i~~i~~~~~~~g~~ 163 (625)
T 2z86_A 90 LIIDGLSIVIPTYNRAKILAITLACLCNQKTIY-DYEVIVADDGSKENIEEIVREFE-----SLLNIKYVRQKDYGYQLC 163 (625)
T ss_dssp CCCCCEEEEEEESSCHHHHHHHHHHHHTCCCSS-CEEEEEEEESCSSCHHHHHHTTT-----TTSCEEEEEECCCSCCHH
T ss_pred ccCCcEEEEEecCCcHHHHHHHHHHHHhhccCC-CeEEEEEeCCCchhHHHHHHHhh-----hcCCeEEEEeCCCCcchh
Confidence 456899999999999999999999999998875 68899999999999988877431 224555655555444699
Q ss_pred hhHHHHHhhcccCCccEEEEEcCCCCCCHHHHHHHHHHhhcCCCeeEEEeeeEeecCCCChHHHhhhhhhhh--------
Q 005700 298 GNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDINLSF-------- 369 (682)
Q Consensus 298 gaLn~gl~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~~~~~p~vg~Vqg~~~~~n~~~~l~t~~~~~~~~~-------- 369 (682)
+|+|.|++ .+++|||+++|+|+.++|++|..++..+.++|+++++++.....+................
T Consensus 164 ~a~N~g~~---~a~g~~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (625)
T 2z86_A 164 AVRNLGLR---AAKYNYVAILDCDMAPNPLWVQSYMELLAVDDNVALIGPRKYIDTSKHTYLDFLSQKSLINEIPEIITN 240 (625)
T ss_dssp HHHHHHHH---HCCSSEEEEECTTEEECTTHHHHHHHHHHHCTTEEEECCEEEECCTTCCHHHHHHSTTGGGTSCC----
T ss_pred HHHHHHHH---hCCcCEEEEECCCCCCCHHHHHHHHHHHhcCCceEEEEeeeeccCcccchhhcccchHHhhhcchhccC
Confidence 99999999 5799999999999999999999999999988998888877655444322222111110000
Q ss_pred ---------------h---hHHHHhhccccccccccccceEEEEeeeehhcCCCCCCCc---hhHHHHHHHHHHcCCeEE
Q 005700 370 ---------------H---FEVEQQVNGVFINFFGFNGTAGVWRIKALEDSGGWMERTT---VEDMDIAVRAHLRGWKFI 428 (682)
Q Consensus 370 ---------------~---~~~~~~~~~~~~~~~~~~G~~~~~Rr~al~~iGG~~~~~~---~ED~~l~~rl~~~G~ki~ 428 (682)
. +...............+.|+++++||++++++|||++... +||.+++.|+.++|+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~l~~iGgfde~~~~~g~ED~dl~~Rl~~~G~~i~ 320 (625)
T 2z86_A 241 NQVAGKVEQNKSVDWRIEHFKNTDNLRLCNTPFRFFSGGNVAFAKKWLFRAGWFDEEFTHWGGEDNEFGYRLYREGCYFR 320 (625)
T ss_dssp -----------CCCTHHHHHHHTTTTTTCSCGGGGCCTTEEEEETHHHHHHCCCCTTCSSCCCHHHHHHHHHHHTTCEEE
T ss_pred CchhhhhccCCccccchhhhcccccccccCCceeEEeeceeeeEHHHHHHhCCCccccccCCcchhhhhhhHHhCCceEE
Confidence 0 0000000111112234789999999999999999998754 599999999999999999
Q ss_pred EecCceeeeccCcCHHHH
Q 005700 429 FLNDVECQCELPESYEAY 446 (682)
Q Consensus 429 y~~~a~~~~e~p~t~~~~ 446 (682)
++|++.+++..|.+....
T Consensus 321 ~~p~~~v~H~~~~~~~~~ 338 (625)
T 2z86_A 321 SVEGAMAYHQEPPGKENE 338 (625)
T ss_dssp ECGGGCEEEECCC-----
T ss_pred EcccchhhccCCccccch
Confidence 999999998887765443
No 6
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=99.88 E-value=1.1e-22 Score=232.45 Aligned_cols=240 Identities=13% Similarity=0.133 Sum_probs=173.7
Q ss_pred CCCCeEEEEeecCCch-HHHHHHHHHHHcCCCCCCceEEEEEcCCCChhH-HHHHHHHHHHHhhcCCeEEEEeccCCCCc
Q 005700 218 GFFPMVLVQIPMCNEK-EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTA-QTLIKEEVLKWQEAGANIVYRHRILRDGY 295 (682)
Q Consensus 218 ~~~P~VsVvIP~yNE~-~~l~~tL~Sl~~qdYP~~~l~ViVvDD~sdd~t-~~~l~~~~~~~~~~~v~v~~~~r~~~~g~ 295 (682)
...|+||||||+|||+ +.+.+||+|+++|+||+..++|+||||+|+|.+ .+.+++..+ ...++.+++.+.+.|
T Consensus 109 ~~~P~vSVIIp~yNe~~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl~~~l~~~~~----~~~~v~vi~~~~n~G- 183 (570)
T 2d7i_A 109 ETLPNTSIIIPFHNEGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLEDYMA----LFPSVRILRTKKREG- 183 (570)
T ss_dssp SSCCCEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGGTHHHHHHHT----TSTTEEEEECSSCCC-
T ss_pred CCCCCeEEEEEECCCCHHHHHHHHHHHHhcCCccCcEEEEEEECCCCcHHHHHHHHHHHH----hCCeEEEEECCCCCC-
Confidence 4579999999999998 999999999999999875568999999999888 888776544 234566666666666
Q ss_pred chhhHHHHHhhcccCCccEEEEEcCCCCCCHHHHHHHHHHhhcCCCeeEEEeeeEeecCCCChHHHh--h----hhhhhh
Q 005700 296 KAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRL--Q----DINLSF 369 (682)
Q Consensus 296 KagaLn~gl~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~~~~~p~vg~Vqg~~~~~n~~~~l~t~~--~----~~~~~~ 369 (682)
++.|+|.|++ .+++|||+++|+|+.++|++|+.++..+.+++++ +|++.....+.+....... . .+....
T Consensus 184 ~~~A~N~G~~---~A~gd~i~fLD~D~~~~p~~L~~ll~~l~~~~~~-vv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (570)
T 2d7i_A 184 LIRTRMLGAS---VATGDVITFLDSHCEANVNWLPPLLDRIARNRKT-IVCPMIDVIDHDDFRYETQAGDAMRGAFDWEM 259 (570)
T ss_dssp HHHHHHHHHH---HCCSSEEEECCSSEEECTTCSHHHHHHHHHCTTE-EEEEEEEEECTTTCCEECCTTSSCEEEECTTC
T ss_pred HHHHHHHHHH---hcCCCEEEEEcCCccccccHHHHHHHHHHhCCCE-EEeeeeeccCCCchhhccccCCcccccccccc
Confidence 9999999999 5799999999999999999999999999987765 5555554444321100000 0 000000
Q ss_pred hhHHHH-----hhc--cccccccccccceEEEEeeeehhcCCCCCCCc---hhHHHHHHHHHHcCCeEEEecCceeeecc
Q 005700 370 HFEVEQ-----QVN--GVFINFFGFNGTAGVWRIKALEDSGGWMERTT---VEDMDIAVRAHLRGWKFIFLNDVECQCEL 439 (682)
Q Consensus 370 ~~~~~~-----~~~--~~~~~~~~~~G~~~~~Rr~al~~iGG~~~~~~---~ED~~l~~rl~~~G~ki~y~~~a~~~~e~ 439 (682)
.+.... ... ........++|+++++||++++++|||++... +||.|+++|+.+.|+++.++|.+.+++..
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~~~v~H~~ 339 (570)
T 2d7i_A 260 YYKRIPIPPELQKADPSDPFESPVMAGGLFAVDRKWFWELGGYDPGLEIWGGEQYEISFKVWMCGGRMEDIPCSRVGHIY 339 (570)
T ss_dssp CEEEECCCTTTCCSSTTSCEECSSCCSSSEEEEHHHHHHTTSSCTTCCSSSSHHHHHHHHHHHTTCEEEEEEEEEEEECC
T ss_pred cccccccchhhhccCCCcceecccccceEEEEEHHHHHhcCCCCCcccccCcchHHHHHHHHhCCCeEEEccCeEEEEEc
Confidence 000000 000 00112223679999999999999999998754 69999999999999999999999987741
Q ss_pred ----CcC-------HHHHHHHhHhhhchhhHHHHHhch
Q 005700 440 ----PES-------YEAYRKQQHRWHSGPMQLFRLCLP 466 (682)
Q Consensus 440 ----p~t-------~~~~~~Qr~RW~~G~~~~~~~~~~ 466 (682)
|.+ .+...+...+|.....+.+....+
T Consensus 340 r~~~~~~~~~~~~~~~n~~r~~~~W~d~~~~~~y~~~p 377 (570)
T 2d7i_A 340 RKYVPYKVPAGVSLARNLKRVAEVWMDEYAEYIYQRRP 377 (570)
T ss_dssp CSSCCSCCCSSCCHHHHHHHHHHHHCGGGHHHHHTTCG
T ss_pred cccCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 211 345666677898887766554433
No 7
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=99.86 E-value=1.4e-21 Score=220.07 Aligned_cols=237 Identities=14% Similarity=0.144 Sum_probs=165.8
Q ss_pred CCCCeEEEEeecCCchH-HHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCCeEEEEeccCCCCcc
Q 005700 218 GFFPMVLVQIPMCNEKE-VYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYK 296 (682)
Q Consensus 218 ~~~P~VsVvIP~yNE~~-~l~~tL~Sl~~qdYP~~~l~ViVvDD~sdd~t~~~l~~~~~~~~~~~v~v~~~~r~~~~g~K 296 (682)
...|.||||||+|||++ .+.++|+|+++|+||+..++|+||||+|+|.+.+... ....++.+++.+.+.| +
T Consensus 63 ~~~p~vSVIIp~yN~~~~~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D~t~~~~~-------~~~~~v~vi~~~~n~G-~ 134 (501)
T 2ffu_A 63 VDLPATSVVITFHNEARSALLRTVVSVLKKSPPHLIKEIILVDDYSNDPEDGALL-------GKIEKVRVLRNDRREG-L 134 (501)
T ss_dssp SSCCCEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCSCTHHHHGG-------GGBTTEEEEECSSCCH-H
T ss_pred cCCCCEEEEEEeCcCcHHHHHHHHHHHHhhCchhhceeEEEEECCCCchHHHHHH-------hcCCCEEEEECCCCcC-H
Confidence 46899999999999996 9999999999999987557899999999888753221 2234566666666666 9
Q ss_pred hhhHHHHHhhcccCCccEEEEEcCCCCCCHHHHHHHHHHhhcCCCeeEEEeeeEeecCCCChH-HHh----hhhhhhhh-
Q 005700 297 AGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLL-TRL----QDINLSFH- 370 (682)
Q Consensus 297 agaLn~gl~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~~~~~p~vg~Vqg~~~~~n~~~~l~-t~~----~~~~~~~~- 370 (682)
+.|+|.|++ .+++|||+++|+|+.++|++|+.++..+.+++. ++|++.....+.+.-.. ... ..+.....
T Consensus 135 ~~A~N~G~~---~A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (501)
T 2ffu_A 135 MRSRVRGAD---AAQAKVLTFLDSHCECNEHWLEPLLERVAEDRT-RVVSPIIDVINMDNFQYVGASADLKGGFDWNLVF 210 (501)
T ss_dssp HHHHHHHHH---HCCSSEEEECCSSEEECTTCHHHHHHHHHHCTT-EEEEEEEEEECTTTCCEECBCSSEEEEECTTCCE
T ss_pred HHHHHHHHH---hcCCCEEEEECCCcccCccHHHHHHHHHHhCCC-eEEEeeeccCcCCCceeecCCcccceEeeecCCC
Confidence 999999999 579999999999999999999999999987665 46766554444321000 000 00000000
Q ss_pred ----hHHH-Hhhc--c--ccccccccccceEEEEeeeehhcCCCCCCCc---hhHHHHHHHHHHcCCeEEEecCceeeec
Q 005700 371 ----FEVE-QQVN--G--VFINFFGFNGTAGVWRIKALEDSGGWMERTT---VEDMDIAVRAHLRGWKFIFLNDVECQCE 438 (682)
Q Consensus 371 ----~~~~-~~~~--~--~~~~~~~~~G~~~~~Rr~al~~iGG~~~~~~---~ED~~l~~rl~~~G~ki~y~~~a~~~~e 438 (682)
.... .... . .......+.|+++++||++++++|||++... +||.++++|+.+.|+++.++|.+.+.+.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfde~~~~~g~ED~dl~~Rl~~~G~~i~~~p~~~v~H~ 290 (501)
T 2ffu_A 211 KWDYMTPEQRRSRQGNPVAPIKTPMIAGGLFVMDKFYFEELGKYDMMMDVWGGENLEISFRVWQCGGSLEIIPCSRVGHV 290 (501)
T ss_dssp EEEECCHHHHHHTSSCTTSCEECSSCCSSSEEEEHHHHHHTTCCCTTCCSSSSHHHHHHHHHHHTTCEEEEEEEEEEEEC
T ss_pred ccccCCHHHHhhccCCCCCcccCccccceEEEEEHHHHHHhCCCCccccccCcchHHHHHHHHhcCCeEEEccCcEEEEE
Confidence 0000 0000 0 0111223678999999999999999998753 8999999999999999999999988775
Q ss_pred c--------CcC-----HHHHHHHhHhhhchhhHHHHHhch
Q 005700 439 L--------PES-----YEAYRKQQHRWHSGPMQLFRLCLP 466 (682)
Q Consensus 439 ~--------p~t-----~~~~~~Qr~RW~~G~~~~~~~~~~ 466 (682)
. |.. .....+...+|..+..+.+....+
T Consensus 291 ~r~~~~~~~~~~~~~~~~~n~~r~~~~w~d~~~~~~y~~~p 331 (501)
T 2ffu_A 291 FRKQHPYTFPGGSGTVFARNTRRAAEVWMDEYKNFYYAAVP 331 (501)
T ss_dssp CCSSCCSCCTTCHHHHHHHHHHHHHHHHCGGGHHHHHHHCG
T ss_pred ccCcCCCcCCccchhHHHHHHHHHHHHHHHHHHHHHhhcCc
Confidence 2 111 123344445576666555444333
No 8
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.85 E-value=1.9e-21 Score=224.63 Aligned_cols=218 Identities=14% Similarity=0.195 Sum_probs=164.4
Q ss_pred CCCCeEEEEeecCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCCeEEEEeccCCCCcch
Q 005700 218 GFFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKA 297 (682)
Q Consensus 218 ~~~P~VsVvIP~yNE~~~l~~tL~Sl~~qdYP~~~l~ViVvDD~sdd~t~~~l~~~~~~~~~~~v~v~~~~r~~~~g~Ka 297 (682)
...|.|||+||+||+++.+.+||+|+++|+|++ ++|+|+||+|+|.+.+++++..+ ...++.+++ ..+.| ++
T Consensus 372 ~~~~~vsiii~~yn~~~~l~~~l~s~~~q~~~~--~eiivvdd~S~d~t~~~~~~~~~----~~~~i~~~~-~~n~G-~~ 443 (625)
T 2z86_A 372 KRVPLVSIYIPAYNCSKYIVRCVESALNQTITD--LEVCICDDGSTDDTLRILQEHYA----NHPRVRFIS-QKNKG-IG 443 (625)
T ss_dssp CSSCSEEEEEEESSCTTTHHHHHHHHHSSSCCS--EEEEEEEESCSSSHHHHHHHHHT----TCTTEEEEE-ECCCC-HH
T ss_pred ccCCeEEEEEeCCCCHHHHHHHHHHHHhCcCCC--eEEEEEECcCChhHHHHHHHHHh----hCCcEEEEe-CCCCC-HH
Confidence 346899999999999999999999999999985 67999999999999988876432 333555554 44445 99
Q ss_pred hhHHHHHhhcccCCccEEEEEcCCCCCCHHHHHHHHHHhhcCCCeeEEEeeeEeecCCCChHHHhhhhhhhhhhHHHHhh
Q 005700 298 GNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDINLSFHFEVEQQV 377 (682)
Q Consensus 298 gaLn~gl~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~~~~~p~vg~Vqg~~~~~n~~~~l~t~~~~~~~~~~~~~~~~~ 377 (682)
+|+|.|++ .+++|||+++|+|+.++|++|++++..+..+|++++|.+.....+.+........... .+.... .
T Consensus 444 ~a~n~g~~---~a~g~~i~~ld~D~~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~ 516 (625)
T 2z86_A 444 SASNTAVR---LCRGFYIGQLDSDDFLEPDAVELCLDEFRKDLSLACVYTTNRNIDREGNLISNGYNWP---IYSREK-L 516 (625)
T ss_dssp HHHHHHHH---HCCSSEEEECCTTCEECTTHHHHHHHHHHHCTTCSEEEEEEEEECTTSCEEEECCCCS---SCCHHH-H
T ss_pred HHHHHHHH---hcCCCEEEEECCCcccChhHHHHHHHHHHhCCCeeEEEeeeEEECCCCCEeccCcccc---cCCHHH-H
Confidence 99999999 5799999999999999999999999999888999999988776665544322111000 000111 1
Q ss_pred ccccccccccccceEEEEeeeehhcCCCCCC-CchhHHHHHHHHHHcCCeEEEecCceee---eccCcCHHHHHHHhHhh
Q 005700 378 NGVFINFFGFNGTAGVWRIKALEDSGGWMER-TTVEDMDIAVRAHLRGWKFIFLNDVECQ---CELPESYEAYRKQQHRW 453 (682)
Q Consensus 378 ~~~~~~~~~~~G~~~~~Rr~al~~iGG~~~~-~~~ED~~l~~rl~~~G~ki~y~~~a~~~---~e~p~t~~~~~~Qr~RW 453 (682)
.. . .+.|+++++||++++++|||++. ...||.++++|+.+.| ++.++|++.++ +....+.+....|+.+|
T Consensus 517 ~~---~--~~~~~~~~~~r~~~~~~ggfd~~~~~~eD~dl~~r~~~~g-~~~~~~~~~~~~r~h~~~~s~~~~~~~~~~~ 590 (625)
T 2z86_A 517 TS---A--MICHHFRMFTARAWNLTEGFNESISNAVDYDMYLKLSEVG-PFKHINKICYNRVLHGENTSIKKLDIQKENH 590 (625)
T ss_dssp TT---S--CCCCSCEEEEHHHHTTTTCCCSSCSSCHHHHHHHHHTTTS-CEEEEEEEEEEEECC----CCSSHHHHHHHH
T ss_pred hh---c--ccCCceEEEEHHHHHHhCCCCCccCChHHHHHHHHHHHhC-CEEEeCCcEEEEEECCCccchhhHHHHHHHH
Confidence 11 1 25788999999999999999886 3579999999999999 99999998754 33445555556666665
Q ss_pred hch
Q 005700 454 HSG 456 (682)
Q Consensus 454 ~~G 456 (682)
...
T Consensus 591 ~~~ 593 (625)
T 2z86_A 591 FKV 593 (625)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 9
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=99.84 E-value=5e-21 Score=220.98 Aligned_cols=215 Identities=13% Similarity=0.101 Sum_probs=151.1
Q ss_pred CCCeEEEEeecCCchHHHHHHHHHHHcCCCCCC-ceEEEEEcCCCChh--HHHHHHHHHHHHhhcCCeEEEEeccCCCCc
Q 005700 219 FFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKS-KILIQVLDDSDDPT--AQTLIKEEVLKWQEAGANIVYRHRILRDGY 295 (682)
Q Consensus 219 ~~P~VsVvIP~yNE~~~l~~tL~Sl~~qdYP~~-~l~ViVvDD~sdd~--t~~~l~~~~~~~~~~~v~v~~~~r~~~~g~ 295 (682)
..|+|||+||+||+++.+.+||+|+.+|+|+.+ ..+|+||||+|+|. +....+ ..+ ..+.++.++..+ |.|
T Consensus 178 ~~pkVSVVIptYN~~~~L~~~L~SL~~qt~~~~~~~EIIVVDNgStD~s~~~~~~e-~~~---~~~~~I~vI~~~-N~G- 251 (657)
T 4fix_A 178 GTANIAVGIPTFNRPADCVNALRELTADPLVDQVIGAVIVPDQGERKVRDHPDFPA-AAA---RLGSRLSIHDQP-NLG- 251 (657)
T ss_dssp SCCCEEEECCBSSCHHHHHHHHHHHTTSHHHHTTEEEEEEEECSSSCGGGSTTHHH-HHH---HHGGGEEEEECC-CCH-
T ss_pred CCCeEEEEEEecCCHHHHHHHHHHHHcCccccCCCCEEEEEECcCCCccchHHHHH-HHH---hcCCCEEEEECC-CCC-
Confidence 468999999999999999999999999998432 34799999998763 222222 221 123356666555 555
Q ss_pred chhhHHHHHhhcccC-CccEEEEEcCCCCCCHHHHHHHHHHhhcCCCeeEEEeeeEeecCCCCh------HH-------H
Q 005700 296 KAGNLKSAMNCSYVK-DYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENL------LT-------R 361 (682)
Q Consensus 296 KagaLn~gl~~~~~a-~~d~Vl~lDaD~~~~pd~L~~lv~~~~~~p~vg~Vqg~~~~~n~~~~l------~t-------~ 361 (682)
.+++.|.|++.+... ++|||+++|+|+.++|++|.+++..++.+|++++|++.....+..... +. .
T Consensus 252 ~a~a~N~Gl~~A~g~~~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~~~~vg~~il~~~~~~~~~~~g~~~~~~~~~~~~ 331 (657)
T 4fix_A 252 GSGGYSRVMYEALKNTDCQQILFMDDDIRLEPDSILRVLAMHRFAKAPMLVGGQMLNLQEPSHLHIMGEVVDRSIFMWTA 331 (657)
T ss_dssp HHHHHHHHHHHHHHHCCCSEEEEECSSEEECTHHHHHHHHHHHHBSSCCEEEEEEEETTSTTEECCSCEEEETTTTEEEE
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEECCCCccChhHHHHHHHHHHhCCCcEEEEeEEecCCCCceeeecccEeccccccccc
Confidence 899999999964222 689999999999999999999999999888998888765544332100 00 0
Q ss_pred hhhhhhhhhh-----H----HHHhhccccccccccccceEEEEeeeehhcCCCCCC-CchhHHHHHHHHHHcCCeEEEec
Q 005700 362 LQDINLSFHF-----E----VEQQVNGVFINFFGFNGTAGVWRIKALEDSGGWMER-TTVEDMDIAVRAHLRGWKFIFLN 431 (682)
Q Consensus 362 ~~~~~~~~~~-----~----~~~~~~~~~~~~~~~~G~~~~~Rr~al~~iGG~~~~-~~~ED~~l~~rl~~~G~ki~y~~ 431 (682)
.....+...+ . ....... ...+....|+++++|+++++++||+++. ...||.|+++|+.++||++.++|
T Consensus 332 ~~~~~~~~~f~~~~l~~~~~~~~~~~~-~~~v~~~~g~~~lirr~v~~~vGgfd~~F~~~ED~Dl~lR~~~~G~ki~~~p 410 (657)
T 4fix_A 332 APHAEYDHDFAEYPLNDNNSRSKLLHR-RIDVDYNGWWTCMIPRQVAEELGQPLPLFIKWDDADYGLRAAEHGYPTVTLP 410 (657)
T ss_dssp CTTCCSCEETTTSCSSCSSHHHHGGGB-CCCCSBCCTTEEEEEHHHHHHHCSCCSCSSSSHHHHHHHHHHHTTCCEEEEE
T ss_pred ccccccccccccccccccccccccccc-ceeccccchhHhHhhHHHHHHhCCChhHhccCcHHHHHHHHHHcCCeEEEEC
Confidence 0000000000 0 0011111 1123346889999999999999999754 34699999999999999999999
Q ss_pred CceeeeccC
Q 005700 432 DVECQCELP 440 (682)
Q Consensus 432 ~a~~~~e~p 440 (682)
++.+++...
T Consensus 411 ~a~V~H~~~ 419 (657)
T 4fix_A 411 GAAIWHMAW 419 (657)
T ss_dssp EEEEEECCS
T ss_pred CEEEEEcCc
Confidence 999998653
No 10
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=99.83 E-value=3.5e-20 Score=197.31 Aligned_cols=203 Identities=15% Similarity=0.088 Sum_probs=142.5
Q ss_pred CCCCeEEEEeecCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCCeEEE----Ee-ccCC
Q 005700 218 GFFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVY----RH-RILR 292 (682)
Q Consensus 218 ~~~P~VsVvIP~yNE~~~l~~tL~Sl~~qdYP~~~l~ViVvDD~sdd~t~~~l~~~~~~~~~~~v~v~~----~~-r~~~ 292 (682)
...|+|||+||+|||++.+.++|+|+.+|+||. .++|+|+||+|+|.+.+++++ .+.++.. +. .+.+
T Consensus 45 ~~~~~vSViIp~yN~~~~l~~~l~sl~~q~~~~-~~eiivVDdgS~D~t~~~~~~-------~~~~~~~~~~~~~~~~~n 116 (329)
T 3ckj_A 45 KAGRTISVVLPALDEEDTIGSVIDSISPLVDGL-VDELIVLDSGSTDDTEIRAVA-------AGARVVSREQALPEVPIR 116 (329)
T ss_dssp TTTCCEEEEEEESSCTTTHHHHHHHHGGGBTTT-BSEEEEEECSCCSSHHHHHHH-------TTCEEEEHHHHCTTSCCC
T ss_pred ccCCcEEEEEeeCCCHHHHHHHHHHHHHhhCCC-CcEEEEEeCCCCchHHHHHHH-------hhhhhccceeeeccCCCC
Confidence 346899999999999999999999999999984 467999999999999888764 2333221 11 2344
Q ss_pred CCcchhhHHHHHhhcccCCccEEEEEcCCCC-CCHHHHHHHHHHhhcCCCeeEEEeeeEeecC-CC-------ChHHHhh
Q 005700 293 DGYKAGNLKSAMNCSYVKDYEFVAIFDADFQ-PNPDFLRRTVPHFKDNEELGLVQARWSFVNK-DE-------NLLTRLQ 363 (682)
Q Consensus 293 ~g~KagaLn~gl~~~~~a~~d~Vl~lDaD~~-~~pd~L~~lv~~~~~~p~vg~Vqg~~~~~n~-~~-------~l~t~~~ 363 (682)
. +|+.|+|.|++ .+++|||+++|+|+. ++|++|.+++..+..+|++++|+|....... +. ....+..
T Consensus 117 ~-G~~~a~n~g~~---~a~gd~i~~lD~D~~~~~p~~l~~l~~~l~~~~~~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~ 192 (329)
T 3ckj_A 117 P-GKGEALWRSLA---ASRGDIVVFVDSDLINPHPMFVPWLVGPLLTGDGVHLVKSFYRRPLNVGDAGGGAGATGGGRVT 192 (329)
T ss_dssp C-SHHHHHHHHHH---HCCCSEEEECCTTEESCCTTHHHHHHHHHHSCSSCCEEEEEEECC---------------CHHH
T ss_pred C-CHHHHHHHHHH---hCCCCEEEEECCCCCCcChHHHHHHHHHHHhCCCccEEEEEecccccCCcccccccccCCCcee
Confidence 4 49999999999 579999999999998 8999999999997778999999987644221 10 1111111
Q ss_pred hhhhhhhhHHHHhhccccccccccccceEEEEeeeehhcCCCCCCCchhHHHHHHHHHH-cCCe-EEEecCceeee
Q 005700 364 DINLSFHFEVEQQVNGVFINFFGFNGTAGVWRIKALEDSGGWMERTTVEDMDIAVRAHL-RGWK-FIFLNDVECQC 437 (682)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al~~iGG~~~~~~~ED~~l~~rl~~-~G~k-i~y~~~a~~~~ 437 (682)
.... . .................|++.++||++++++| |++ ...||.+++.++.+ .|++ +..++.....+
T Consensus 193 ~~~~--~-~~~~~~~~~~~~~~~~~~g~~~~rr~~l~~i~-f~~-~~~~D~~l~~r~~~~~g~~~i~~v~~~~r~h 263 (329)
T 3ckj_A 193 ELVA--R-PLLAALRPELGCILQPLGGEYAATRELLTSVP-FAP-GYGVEIGLLVDTFDRLGLDAIAQVNLGVREH 263 (329)
T ss_dssp HHTH--H-HHHHHHCGGGGGCSCTTCSCEEEEHHHHTTSC-BCC-GGGHHHHHHHHHHHHHCGGGEEEEEEEECEE
T ss_pred hhhH--H-HHHHHhhhhhccccCCCccceeeeHHHHHhCC-CCC-CCcccHHHHHHHHHhcCCccEeeecceEEec
Confidence 1000 0 00010111111222346777899999999996 644 46799999999987 6775 77777655333
No 11
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=99.76 E-value=4e-20 Score=217.37 Aligned_cols=199 Identities=13% Similarity=0.167 Sum_probs=0.0
Q ss_pred CCeEEEEeecCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCCeEEEEeccCCCCcchhh
Q 005700 220 FPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGN 299 (682)
Q Consensus 220 ~P~VsVvIP~yNE~~~l~~tL~Sl~~qdYP~~~l~ViVvDD~sdd~t~~~l~~~~~~~~~~~v~v~~~~r~~~~g~Kaga 299 (682)
.|+|||+||+||+++.+.+||+|+++|+|++ ++|+||||||+|.+.+++++..+++ +.++.++..+.+.| .++|
T Consensus 1 Mp~vSVIIp~yN~~~~L~~~L~Sll~Qt~~~--~EIIVVDDgStD~t~~il~~~~~~~---~~~i~~i~~~~n~G-~~~a 74 (729)
T 3l7i_A 1 MNKLTIIVTYYNAEEYITGCLESIKQQRTQD--FNLIIVNDGSTDQSKKLMDEAIKDY---DKNIRFIDLDENSG-HAHA 74 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CceEEEEEEcCCCHHHHHHHHHHHHhCCCCC--eEEEEEECCCCCcHHHHHHHHHHhC---CCCEEEEECCCCCC-HHHH
Confidence 3789999999999999999999999999995 6699999999999999888765432 23555555555555 9999
Q ss_pred HHHHHhhcccCCccEEEEEcCCCCCCHHHHHHHHHHhhcCCCeeEEEeeeEeecCCCChHHHhhhhhhhhhhHHHHhhcc
Q 005700 300 LKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDINLSFHFEVEQQVNG 379 (682)
Q Consensus 300 Ln~gl~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~~~~~p~vg~Vqg~~~~~n~~~~l~t~~~~~~~~~~~~~~~~~~~ 379 (682)
+|.|++ .++||||+++|+|+.++|++|+.++..+. ++++.+... ...+................ .........
T Consensus 75 rN~gi~---~A~gdyI~flD~Dd~~~p~~l~~l~~~l~-~~d~v~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 147 (729)
T 3l7i_A 75 RNIALE---EVETPYFMFLDADDELASYAITFYLEKFN-NTDGLIAPI--HSFTTQRPQFVDLDRVRVEY-FNAKENINS 147 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHH---hccCCEEEEECCCCCCChhHHHHHHHHhc-CCCEEEEee--EEeecCCCccccccceeeee-ecchhhHHH
Confidence 999999 68999999999999999999999999998 455433332 22222211111111111000 001111111
Q ss_pred ccccccccccceEEEEeeeehhcC-CCCCCC-chhHHHHHHHHHHcCCeEEEe-cCce
Q 005700 380 VFINFFGFNGTAGVWRIKALEDSG-GWMERT-TVEDMDIAVRAHLRGWKFIFL-NDVE 434 (682)
Q Consensus 380 ~~~~~~~~~G~~~~~Rr~al~~iG-G~~~~~-~~ED~~l~~rl~~~G~ki~y~-~~a~ 434 (682)
.. ....++++++||++++++| +|++.. ..||.+++.++..+|+++.++ +.+.
T Consensus 148 ~~---~~~~~~~~~~rr~~l~~~gl~fde~~~~~ED~d~~~rl~~~g~~i~~~~~~~~ 202 (729)
T 3l7i_A 148 FL---RKQSACNIIFRTAIVRAHHIRFNENLNTYVDWSFVLEYMKYVNKFVRIFNFPF 202 (729)
T ss_dssp ----------------------------------------------------------
T ss_pred Hh---hccchhheeeeHHHHHHcCCCcCCCCCcccCHHHHHHHHHhcCCEEEecCcEE
Confidence 11 1246778999999999999 898874 789999999999999999999 5554
No 12
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=99.75 E-value=2.4e-17 Score=178.82 Aligned_cols=198 Identities=14% Similarity=0.052 Sum_probs=140.2
Q ss_pred CCCeEEEEeecCCchHHHHHHHHHHHc--CCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCCeEEEE-----eccC
Q 005700 219 FFPMVLVQIPMCNEKEVYQQSIAAVCN--LDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYR-----HRIL 291 (682)
Q Consensus 219 ~~P~VsVvIP~yNE~~~l~~tL~Sl~~--qdYP~~~l~ViVvDD~sdd~t~~~l~~~~~~~~~~~v~v~~~-----~r~~ 291 (682)
..|+|||+||+|||++.|.++|+|+.+ |+||. .++|+||||+|+|.|.+++++ .+.++... ..+.
T Consensus 92 ~~p~vSVVIP~yNe~~~l~~~l~sl~~~l~~~~~-~~EIIVVDDgStD~T~~i~~~-------~~~~v~~~~~~~i~~~~ 163 (387)
T 3f1y_A 92 LGLTVSAVLPSRNVADTVGGIIDEIHALNERAPL-IDQILVVDADSEDGTAGVAAS-------HGAEVYSENELMSGYGD 163 (387)
T ss_dssp HTCCEEEEEEESSCTTTHHHHHHHHHHHHHHSCC-CSEEEEEECSCSSSHHHHHHH-------TTCEEEEGGGTTGGGCS
T ss_pred CCCeEEEEEEcCCCHHHHHHHHHHHHHHHhcCCC-CeEEEEEcCcCCccHHHHHHH-------hCchhcccceeEecCCc
Confidence 358899999999999999999999987 56654 467999999999999988774 23333221 1223
Q ss_pred CCCcchhhHHHHHhhcccCCccEEEEEcCCCC-CCHHHHHHHHHHhhcCCCeeEEEeeeEeecCC--------CChHHHh
Q 005700 292 RDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQ-PNPDFLRRTVPHFKDNEELGLVQARWSFVNKD--------ENLLTRL 362 (682)
Q Consensus 292 ~~g~KagaLn~gl~~~~~a~~d~Vl~lDaD~~-~~pd~L~~lv~~~~~~p~vg~Vqg~~~~~n~~--------~~l~t~~ 362 (682)
+. +|+.|+|.|++ .+++|||+++|+|+. ++|++|.+++..+..+|++++|.|........ .+...++
T Consensus 164 n~-G~g~A~n~G~~---~A~gd~i~~lDaD~~~~~p~~L~~l~~~l~~~p~~d~v~G~~~~~~~~~~~~~~~~~g~v~~~ 239 (387)
T 3f1y_A 164 AH-GKGDAMWRALS---VTRGDLVLYIDADTRDFRPQLAYGVLGPVLEVPGVRFVKAAYRRPFRKGESIEEDGGGRVTEL 239 (387)
T ss_dssp CC-SHHHHHHHHTT---TCCSSEEEECCTTCSSCCTHHHHTTHHHHHHSTTCCEEEEEEECC-------CCBCCSHHHHH
T ss_pred cC-CHHHHHHHHHH---hcCCCEEEEEcCCCCcCCHHHHHHHHHHHHHCCCceEEEEeeccccccccccccccCCchhhh
Confidence 44 49999999999 679999999999999 89999999999998788999999865322111 1122221
Q ss_pred hhhhhhhhhHHHHhhccccccccccccceEEEEeeeehhcCCCCCCCchhHHHHHHHHH-HcCCe-EEEecCceee
Q 005700 363 QDINLSFHFEVEQQVNGVFINFFGFNGTAGVWRIKALEDSGGWMERTTVEDMDIAVRAH-LRGWK-FIFLNDVECQ 436 (682)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al~~iGG~~~~~~~ED~~l~~rl~-~~G~k-i~y~~~a~~~ 436 (682)
..- ............+....|...++||++++++ +++ ...++|.++..++. +.|++ +..+|-....
T Consensus 240 ~~~------~l~~~~~~~l~~~~d~~sG~~a~rR~~l~~i-~f~-~gyg~e~ell~~~~~~~G~~~I~eVpi~~~~ 307 (387)
T 3f1y_A 240 TAK------PLFNLFYPELAGFVQPLAGEFVADRELFCSI-PFL-TGYAVETGIMIDVLKKVGLGAMAQVDLGERQ 307 (387)
T ss_dssp THH------HHHHHHCGGGTTCSCTTCSCEEEEHHHHTTS-CEE-CSTTHHHHHHHHHHHHHCGGGEEEEEEEECC
T ss_pred hHH------HHHHHHhHhhccccccccccEEEEHHHHHhC-CCC-CCcchHHHHHHHHHHhcCCCeEEEEecceee
Confidence 100 0000000111112223566789999999999 675 45788999998885 55987 9888866543
No 13
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=99.70 E-value=1.5e-16 Score=162.36 Aligned_cols=184 Identities=10% Similarity=-0.017 Sum_probs=123.4
Q ss_pred CCCeEEEEeecCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCCeEEEEeccCCCCcchh
Q 005700 219 FFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAG 298 (682)
Q Consensus 219 ~~P~VsVvIP~yNE~~~l~~tL~Sl~~qdYP~~~l~ViVvDD~sdd~t~~~l~~~~~~~~~~~v~v~~~~r~~~~g~Kag 298 (682)
..|.+|| ||+||+++.+++||+|+.+.-.....+||+||||+|+|. .| .+.
T Consensus 14 ~~~~iSI-I~~yN~~~~l~~~l~sl~~sl~~q~~~EiIVVDn~s~d~---------------------------~g-~a~ 64 (249)
T 2nxv_A 14 STLMFSV-CSLVRDQAKYDRLLESFERFGFTPDKAEFLAADNREGNQ---------------------------FH-GFS 64 (249)
T ss_dssp CCCSEEE-EEEESCHHHHHHHHHHHHHTTCCTTTEEEEEEECTTSCS---------------------------CC-TTT
T ss_pred CcceEEE-EEeeCCHHHHHHHHHHHHHhccCCCcEEEEEEECCCCCc---------------------------cc-HHH
Confidence 4578997 577999999999999876522211127899999988651 12 678
Q ss_pred hHHHHHhhcccCCccEEEEEcCCCCCCHHHHHHHHHHhhc----CCCeeEEEeeeEeecCCCChHHHhhhhhhhhhhHHH
Q 005700 299 NLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKD----NEELGLVQARWSFVNKDENLLTRLQDINLSFHFEVE 374 (682)
Q Consensus 299 aLn~gl~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~~~~----~p~vg~Vqg~~~~~n~~~~l~t~~~~~~~~~~~~~~ 374 (682)
++|.|++ .+++||++++|+|+.++|++|++++..+++ +|+++++.............. ..............
T Consensus 65 a~N~Gi~---~A~g~yl~fln~D~~~~~~~l~~l~~~~~~~~~~~~~vg~vg~~~~~~~~~g~~~-~~~~~~~~~~~~~~ 140 (249)
T 2nxv_A 65 WHKQMLP---RCKGRYVIFCHEDVELVDRGYDDLVAAIEALEEADPKWLVAGVAGSPWRPLNHSV-TAQALHISDVFGND 140 (249)
T ss_dssp HHHHHGG---GCCSSEEEEEETTEECSSCCHHHHHHHHHHHHHHCTTEEEEESEEEESSCSCTTS-CCCEEEEEETTEEE
T ss_pred HHHHHHH---hcCCCEEEEECCCcccCccHHHHHHHHHHhcccCCCCeeEEeecccccCCCCcee-eecccccCCccccc
Confidence 9999999 689999999999999999999999999986 489888764332222111000 00000000000000
Q ss_pred HhhccccccccccccceEEEEeeeehhcCCCCCCC---chhHHHHHHHHHHcCCeEEEecCceeeecc
Q 005700 375 QQVNGVFINFFGFNGTAGVWRIKALEDSGGWMERT---TVEDMDIAVRAHLRGWKFIFLNDVECQCEL 439 (682)
Q Consensus 375 ~~~~~~~~~~~~~~G~~~~~Rr~al~~iGG~~~~~---~~ED~~l~~rl~~~G~ki~y~~~a~~~~e~ 439 (682)
.........+..+.|+++++||++ .|||++.. ..||.|+++|+.++|+++.+.|.. +++..
T Consensus 141 ~~~~~~~~~v~~~~g~~~~~rr~~---~~gFDe~~~~~~~~D~Dl~~R~~~~G~~~~~~p~~-v~H~~ 204 (249)
T 2nxv_A 141 RRRGNVPCRVESLDECFLLMRRLK---PVLNSYDMQGFHYYGADLCLQAEFLGGRAYAIDFH-LHHYG 204 (249)
T ss_dssp EEESCSSEEEEEECTTEEEEETTB---CCCCCSSCCSSSSHHHHHHHHHHHTTCEEEECCCC-CEECC
T ss_pred cccCCCceEcCeeeeEeeEEEHhh---hCCCCCCCCCcceehhHHHHHHHHcCCeEEEeccE-EEECC
Confidence 000011112333679999999999 67898642 358999999999999999999865 55544
No 14
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...
Probab=99.68 E-value=1.5e-17 Score=173.25 Aligned_cols=179 Identities=16% Similarity=0.147 Sum_probs=127.8
Q ss_pred CCCeEEEEeecCCchHHHHHHHHHHH---cCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCCeEEEEeccCCCCc
Q 005700 219 FFPMVLVQIPMCNEKEVYQQSIAAVC---NLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGY 295 (682)
Q Consensus 219 ~~P~VsVvIP~yNE~~~l~~tL~Sl~---~qdYP~~~l~ViVvDD~sdd~t~~~l~~~~~~~~~~~v~v~~~~r~~~~g~ 295 (682)
..|+||||||+||+++.+.++|+|+. +|+|+ .++|+|+||++|+. -+
T Consensus 63 ~~~~VSIIIP~yN~~~~L~~~L~sl~~~l~q~~~--~~EIiVVdds~d~~---------------------------f~- 112 (287)
T 2fy7_A 63 SPHKVAIIIPFRNRQEHLKYWLYYLHPVLQRQQL--DYGIYVINQAGDTI---------------------------FN- 112 (287)
T ss_dssp CSCEEEEEEEESSCHHHHHHHHHHHHHHHHHTTC--EEEEEEEEECSSSC---------------------------CC-
T ss_pred cCCcEEEEEeeCCCHHHHHHHHHHHHHHHHHhcC--CceEEEEEeCCCCc---------------------------cc-
Confidence 36899999999999999999999999 67887 47799999965421 02
Q ss_pred chhhHHHHH----hhcccCCccEEEEEcCCCCCCHHHHHHHHHHhhcCCCeeEEEeeeEeecCCCChHHHhhhhhhhhhh
Q 005700 296 KAGNLKSAM----NCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDINLSFHF 371 (682)
Q Consensus 296 KagaLn~gl----~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~~~~~p~vg~Vqg~~~~~n~~~~l~t~~~~~~~~~~~ 371 (682)
++.++|.|+ + .+++|||+++|+|+.++|+.... ....+|.. .. ..... ..+
T Consensus 113 ~a~a~N~G~~~al~---~A~gd~i~flD~D~i~~~d~~~~---~~~~~p~~---------~~---~~~~~---~~~---- 167 (287)
T 2fy7_A 113 RAKLLNVGFQEALK---DYDYTCFVFSDVDLIPMNDHNAY---RCFSQPRH---------IS---VAMDK---FGF---- 167 (287)
T ss_dssp HHHHHHHHHHHHHH---HSCCCEEEEECTTEEESBTTSCC---SCCSSCEE---------CC---CEEGG---GTT----
T ss_pred hhhhhhhHHHHHHH---hCCCCEEEEECCCcccCCCcceE---ecCCCCce---------EE---Eeecc---ccc----
Confidence 677788888 5 58999999999999999985210 00011110 00 00000 000
Q ss_pred HHHHhhccccccccccccceEEEEeeeehhcCCCCCCCc---hhHHHHHHHHHHcCCeEEEecC-----ceee-------
Q 005700 372 EVEQQVNGVFINFFGFNGTAGVWRIKALEDSGGWMERTT---VEDMDIAVRAHLRGWKFIFLND-----VECQ------- 436 (682)
Q Consensus 372 ~~~~~~~~~~~~~~~~~G~~~~~Rr~al~~iGG~~~~~~---~ED~~l~~rl~~~G~ki~y~~~-----a~~~------- 436 (682)
.. ....+.|+++++||++++++|||++... .||.|++.|+.++|+++...+. ..++
T Consensus 168 ------~~---~~~~~~G~~~~~rr~~f~~vgGFde~~~g~g~ED~Dl~~Rl~~~G~~i~~~~~~~~~~~~i~H~~~~~~ 238 (287)
T 2fy7_A 168 ------SL---PYVQYFGGVSALSKQQFLTINGFPNNYWGWGGEDDDIFNRLVFRGMSISRPNAVVGTTRHIRHSRDKKN 238 (287)
T ss_dssp ------SC---SSTTCCCSEEEEEHHHHHHTTSCCSCCSSCSCHHHHHHHHHHHTTCCCBCCCTTTCEEEECC-------
T ss_pred ------CC---CcCceeeeEEEEEHHHHHHcCCCCccccccccchHHHHHHHHHcCCeEEecCcccceeEEEecCCCccc
Confidence 00 1123578999999999999999998754 4999999999999999884433 2222
Q ss_pred eccCcCHHHHHHHhHhhhchhhHHH
Q 005700 437 CELPESYEAYRKQQHRWHSGPMQLF 461 (682)
Q Consensus 437 ~e~p~t~~~~~~Qr~RW~~G~~~~~ 461 (682)
...|..++...+|+.||..+.++..
T Consensus 239 ~~n~~~~~~l~~~~~~~~~~Gl~~~ 263 (287)
T 2fy7_A 239 EPNPQRFDRIAHTKETMLSDGLNSL 263 (287)
T ss_dssp --CCCCCCCHHHHHHHTTTSSGGGC
T ss_pred CCCHHHHHHHhhcccEEcCCCcccC
Confidence 2356778889999999999877654
No 15
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=99.47 E-value=2.8e-13 Score=146.76 Aligned_cols=196 Identities=13% Similarity=0.093 Sum_probs=126.5
Q ss_pred EEeecCCchHHHHHHHHHHHc-CCCCCCceEEEEEcCCCChhHHHHHHHHHHHHh-hcCCeEEEEe-c-cC--CCCcchh
Q 005700 225 VQIPMCNEKEVYQQSIAAVCN-LDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQ-EAGANIVYRH-R-IL--RDGYKAG 298 (682)
Q Consensus 225 VvIP~yNE~~~l~~tL~Sl~~-qdYP~~~l~ViVvDD~sdd~t~~~l~~~~~~~~-~~~v~v~~~~-r-~~--~~g~Kag 298 (682)
|+||++|| .+..+++++.. +.+|. ++|+||||||+|.|.+++++..++.+ ..+++++... + .. +.| |+.
T Consensus 4 VIiP~~eE--~I~~vl~~l~~~~~~~~--~EIIVVDDGStD~T~eia~~la~~~~~~~g~~vi~~~~~r~~~~n~G-kG~ 78 (397)
T 2bo4_A 4 VVFPFKHE--HPEVLLHNVRVAAAHPR--VHEVLCIGYERDQTYEAVERAAPEISRATGTPVSVRLQERLGTLRPG-KGD 78 (397)
T ss_dssp EEEECCSS--CHHHHHHHHHHHHHSTT--CCEEEEEESSCCHHHHHHHHHHHHHHHHHSCCEEEEECCCCSSSSSS-HHH
T ss_pred EEEeCCcc--CHHHHHHHHHHhccCCC--eEEEEEECcCCccHHHHHHHhhhhcccccCCeEEEEecccCCCCCCC-HHH
Confidence 55665543 46777777642 34553 56999999999999999997776665 5677766442 2 12 444 999
Q ss_pred hHHHHHhhcc-cCCccEEEEEcCCCC-CCHHHHHHHHHHhhcCCCeeEEEeeeEeecCCCChHHHhh-hhhhhhhhHHHH
Q 005700 299 NLKSAMNCSY-VKDYEFVAIFDADFQ-PNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQ-DINLSFHFEVEQ 375 (682)
Q Consensus 299 aLn~gl~~~~-~a~~d~Vl~lDaD~~-~~pd~L~~lv~~~~~~p~vg~Vqg~~~~~n~~~~l~t~~~-~~~~~~~~~~~~ 375 (682)
|++.|++.+. .+++|+|+++|||.+ .+|+++.+++..+.+ +.++|.|... .....+...+.. ..-....+...+
T Consensus 79 Al~~G~~~Al~~a~gd~vv~mDADlq~~~P~~i~~Ll~~l~~--g~D~V~g~~~-r~~~~~~~~~~~~~~ll~~~~~~~~ 155 (397)
T 2bo4_A 79 GMNTALRYFLEETQWERIHFYDADITSFGPDWITKAEEAADF--GYGLVRHYFP-RASTDAMITWMITRTGFALLWPHTE 155 (397)
T ss_dssp HHHHHHHHHHHHCCCSEEEECCTTCSSCCHHHHHHHHHHHHT--TCSEEEEECC-CCTTSCHHHHHTHHHHHHHHCTTSS
T ss_pred HHHHHHHHHHHhCCCCEEEEEcCCCCCCCHHHHHHHHHHHHc--CCCEEEEEec-cccCCcHHHHHHHHHHHHHHHHHhh
Confidence 9999994332 689999999999996 899999999998864 4677777421 112223222221 100000000000
Q ss_pred hhccccccccccccceEEEEeeeehhcCCC----CCCCchhHHHHHHHHHHcCCeEEEecCc
Q 005700 376 QVNGVFINFFGFNGTAGVWRIKALEDSGGW----MERTTVEDMDIAVRAHLRGWKFIFLNDV 433 (682)
Q Consensus 376 ~~~~~~~~~~~~~G~~~~~Rr~al~~iGG~----~~~~~~ED~~l~~rl~~~G~ki~y~~~a 433 (682)
.. .+....+...++||++++++... .....+.|.++..++.++|+++..+|-.
T Consensus 156 ~~-----~i~dp~sG~~a~~R~vl~~l~~~~~~~~~~~fg~eiel~~~a~~~G~rI~EVpig 212 (397)
T 2bo4_A 156 LS-----WIEQPLGGELLMRREVAAMLYEDERVRRRSDWGIDTLYTFVTVQQGVSIYECYIP 212 (397)
T ss_dssp GG-----GCSCTTCCCEEEEHHHHHHHHHCHHHHTCCSTTHHHHHHHHHHHTTCCEEEEECT
T ss_pred cc-----ccccCCcccEEEeHHHHHHHhhhcccCcCCCcchHHHHHHHHHHcCCEEEEEECc
Confidence 00 11111234558999999887321 2334578999999999999999988743
No 16
>2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A*
Probab=99.02 E-value=1e-09 Score=113.99 Aligned_cols=105 Identities=18% Similarity=0.085 Sum_probs=76.5
Q ss_pred CCeEEEEeecCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHH---HHHHHHHHHHhhcCCeEEEEeccC-----
Q 005700 220 FPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQ---TLIKEEVLKWQEAGANIVYRHRIL----- 291 (682)
Q Consensus 220 ~P~VsVvIP~yNE~~~l~~tL~Sl~~qdYP~~~l~ViVvDD~sdd~t~---~~l~~~~~~~~~~~v~v~~~~r~~----- 291 (682)
...+|||||||||+.. +++++++|.+. .++|++|||||.|.+. +++++.++ ...-++..+|..+
T Consensus 52 ~~klSIVVPvYNEe~~---lLesVl~qi~~--d~eIIlVdDGS~D~s~~e~dil~~~~~---~~~~ri~viHQkn~gls~ 123 (391)
T 2wvl_A 52 LEQTAIVVPTRNERLK---LLEGVLSGIPH--EALILVASNSSPDRFQMERDLLEEFAH---LTERPALIFHQKDPALAE 123 (391)
T ss_dssp HTTEEEEEEESSCCHH---HHHHHHHTSCT--TSEEEEEECCCHHHHHHHHHHHHHHHH---HTTCCEEEEETTCHHHHH
T ss_pred HhceEEEEeccCcHHH---HHHHHHhcCCC--CceEEEEECCCCCChHhHHHHHHHHHh---hcccceEEEeccChHHHH
Confidence 5679999999999974 69999999876 4679999999999995 45554443 1233444444211
Q ss_pred ----------------CCCcchhhHHHHHhhcccCCccEEEEEcCCCCCCHHHHHHH
Q 005700 292 ----------------RDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRT 332 (682)
Q Consensus 292 ----------------~~g~KagaLn~gl~~~~~a~~d~Vl~lDaD~~~~pd~L~~l 332 (682)
.+.+|+.++-.|+..+..+.+|||.|+|||..++.+..+.+
T Consensus 124 Ar~~~G~~~il~~~~~vR~GKGegmi~Gi~~Ak~~~geYVgFvDADdyi~~~v~Eyv 180 (391)
T 2wvl_A 124 ALRAGGYPHPIGEDGLVRSGKAEGMILALVFAALSGRRYVGFIDADNYFPGAVWEYV 180 (391)
T ss_dssp HHHHTTCCTTBCTTSSBCCSHHHHHHHHHHHHHHTTCSEEEECCSCBSCHHHHHHHH
T ss_pred HHHhcCcchhhcccccccccchHHHHHHHHHHHhcCCCEEEEEcCcCCCccCHHHHH
Confidence 12348889999998643458999999999999977655443
No 17
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=98.71 E-value=3.4e-08 Score=104.62 Aligned_cols=197 Identities=13% Similarity=0.154 Sum_probs=112.2
Q ss_pred CeEEEEeecCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCCeEEEEe---------ccC
Q 005700 221 PMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRH---------RIL 291 (682)
Q Consensus 221 P~VsVvIP~yNE~~~l~~tL~Sl~~qdYP~~~l~ViVvDD~sdd~t~~~l~~~~~~~~~~~v~v~~~~---------r~~ 291 (682)
+.++|+|++||..+ ++++|+|+++|..+....+|+|.|||+.+++.++++... .++.+.. ++.
T Consensus 2 ~~~pViI~~yNRp~-l~~~L~sL~~~~p~~~~~~iivsdDgs~~~~~~vi~~~~-------~~I~~~~~~d~~~~~~~~~ 73 (343)
T 1fo8_A 2 AVIPILVIACDRST-VRRCLDKLLHYRPSAELFPIIVSQDCGHEETAQVIASYG-------SAVTHIRQPDLSNIAVQPD 73 (343)
T ss_dssp CCCCEEEEESSCTT-HHHHHHHHHHHCSCTTTSCEEEEECTTCHHHHHHHHTTG-------GGSEEEECSCCCCCCCCTT
T ss_pred CcccEEEEECCcHH-HHHHHHHHHhcCCCcCCcEEEEEECCCCHHHHHHHHHcC-------CceEEEEcCCccccccchh
Confidence 45789999999999 999999999998655566799999999999988876421 1222221 122
Q ss_pred CCCcc-----h----hhHHHHHhhcccCCccEEEEEcCCCCCCHHHHHHH---HHHhhcCCCeeEEEeeeEeecCCCChH
Q 005700 292 RDGYK-----A----GNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRT---VPHFKDNEELGLVQARWSFVNKDENLL 359 (682)
Q Consensus 292 ~~g~K-----a----gaLn~gl~~~~~a~~d~Vl~lDaD~~~~pd~L~~l---v~~~~~~p~vg~Vqg~~~~~n~~~~l~ 359 (682)
+.|.+ + .++|.+++ ..++|+++++|.|+.+.||+++-+ ++.+++|+.+..+++. |....
T Consensus 74 N~g~~~y~~ia~h~~~al~~vf~---~~~~~~vIiLEDDl~~spdF~~y~~~~l~~y~~D~~I~~ISa~----n~~g~-- 144 (343)
T 1fo8_A 74 HRKFQGYYKIARHYRWALGQIFH---NFNYPAAVVVEDDLEVAPDFFEYFQATYPLLKADPSLWCVSAW----NDNGK-- 144 (343)
T ss_dssp CGGGHHHHHHHHHHHHHHHHHHT---TSCCSEEEEEETTEEECTTHHHHHHHHHHHHHHCTTEEEEESC----CTTCB--
T ss_pred hcCcccchhHhHHHHHHHHHHHH---hccCCEEEEEcCCCeECHHHHHHHHHHHHHhhcCCcEEEEecc----cCccc--
Confidence 22221 1 24455554 457999999999999999998554 4445678999888763 22111
Q ss_pred HHhhhhhhhhhhHHHHhhccccccccccccceEEEEeeeehhcC-CCCCCCchhHHHHHH--HHHHcCCeEEEecCce-e
Q 005700 360 TRLQDINLSFHFEVEQQVNGVFINFFGFNGTAGVWRIKALEDSG-GWMERTTVEDMDIAV--RAHLRGWKFIFLNDVE-C 435 (682)
Q Consensus 360 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al~~iG-G~~~~~~~ED~~l~~--rl~~~G~ki~y~~~a~-~ 435 (682)
....... .. ......-.++|-+.+..|+++++.. .|+. ++.+.++ ...++|. ....|+.- +
T Consensus 145 ~~~~~~~---------~~-~~lyrs~~f~~wGWa~wr~~W~e~~~~wp~----~~Wd~w~r~~~~~~~r-~ci~P~vsrv 209 (343)
T 1fo8_A 145 EQMVDSS---------KP-ELLYRTDFFPGLGWLLLAELWAELEPKWPK----AFWDDWMRRPEQRKGR-ACVRPEISRT 209 (343)
T ss_dssp GGGSCTT---------CT-TCEEEESSCCCSSEEEEHHHHHHHGGGCCS----SCHHHHHTSHHHHTTC-EEEEESSBSE
T ss_pred ccccccc---------Cc-ceEEeecCCCchhhhhcHHHHHHHhhhcch----hHHHHHHHHHHHhCCC-EEEEecccee
Confidence 0000000 00 0000111146777888999988763 3433 2344443 3355564 44455544 4
Q ss_pred ee--ccCcCHHHHHHH
Q 005700 436 QC--ELPESYEAYRKQ 449 (682)
Q Consensus 436 ~~--e~p~t~~~~~~Q 449 (682)
++ ..-.+...+++|
T Consensus 210 ~n~G~~G~~~~~f~~~ 225 (343)
T 1fo8_A 210 MTFGRKGVSHGQFFDQ 225 (343)
T ss_dssp EECC------------
T ss_pred EeccccCcchhHHHHH
Confidence 44 333444444433
No 18
>2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A*
Probab=98.69 E-value=3.7e-08 Score=105.19 Aligned_cols=109 Identities=20% Similarity=0.211 Sum_probs=70.3
Q ss_pred CeEEEEeecCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhH------HHHHHHHHHHHhhcCCeEEEEec-----
Q 005700 221 PMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTA------QTLIKEEVLKWQEAGANIVYRHR----- 289 (682)
Q Consensus 221 P~VsVvIP~yNE~~~l~~tL~Sl~~qdYP~~~l~ViVvDD~sdd~t------~~~l~~~~~~~~~~~v~v~~~~r----- 289 (682)
.++|||||||||++.+ |..++++- |. ..+|+||||||.|.+ .+.+++.+... +.+..+.....
T Consensus 51 ~~iSVVIP~yNEE~~l---I~~vL~~i-~~-~~eIIvVDDgSrD~tD~~~~~~~~l~~~~~~~-~~~~~Vl~~~~p~v~~ 124 (394)
T 2zu9_A 51 GKMAVIVPMKNEKLHL---VDGVLKAI-PH-KCPIIIVSNSKREGPNRYKLEVDLIRHFYNLT-HSKIIMIHQKDPGLAK 124 (394)
T ss_dssp TTEEEEEEESSCCHHH---HHHHHHHS-CT-TSCEEEEECCCCSSSCHHHHHHHHHHHHHHHH-CCCEEEEETTCHHHHH
T ss_pred CCEEEEEecCcccHHH---HHHHHHcC-CC-CcEEEEEECcCcccccchhhHHHHHHHHhhcc-ccceEEEecCCcchhH
Confidence 4699999999999654 44444421 21 246899999995555 44554433321 23333332211
Q ss_pred ---------------cCCCCcchhhHHHHHhhcccCCccEEEEEcCCCCCCHHHHHHHHHHhh
Q 005700 290 ---------------ILRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFK 337 (682)
Q Consensus 290 ---------------~~~~g~KagaLn~gl~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~~~ 337 (682)
..++ ||..|+..|+..+...++|+|+++|||. ..|..+.+.+..+.
T Consensus 125 ~~~~~g~~~il~~~~~~r~-GKG~Am~aGl~~A~~~~gd~Vv~~DaDl-~iP~~v~~~~kgy~ 185 (394)
T 2zu9_A 125 AFKEVGYTDILDENGMIRS-GKGEGMLVGLLLAKAIGAEYVGFVDADN-YIPGAVNEYVKDYA 185 (394)
T ss_dssp HHHHHTCCTTBCTTSSBCC-SHHHHHHHHHHHHHHTTCSEEEECCSCB-SCHHHHHHHHHHHH
T ss_pred HhhhccccccccccccccC-ChHHHHHHHHHHHhhCCCCEEEEEeCCC-CCHHHHHHHHHHhh
Confidence 1134 5999999999842112899999999999 67888877777654
No 19
>3lw6_A FI08434P, beta-4-galactosyltransferase 7; protein-Mn-UDP complex, glycosyltransferase; HET: UDP; 1.81A {Drosophila melanogaster}
Probab=97.38 E-value=0.00045 Score=69.79 Aligned_cols=181 Identities=15% Similarity=0.197 Sum_probs=115.8
Q ss_pred CCCeEEEEeecCCchHHHHHHHHHHH----cCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCCeEEEEeccCCCC
Q 005700 219 FFPMVLVQIPMCNEKEVYQQSIAAVC----NLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDG 294 (682)
Q Consensus 219 ~~P~VsVvIP~yNE~~~l~~tL~Sl~----~qdYP~~~l~ViVvDD~sdd~t~~~l~~~~~~~~~~~v~v~~~~r~~~~g 294 (682)
...+|+||||-+|.++.+...+..+. +|. -.+.|+|++...+. +-+
T Consensus 49 ~~~kvAIIIPyRdR~~hL~~fl~~lhp~L~rQ~---l~y~I~VieQ~~~~---------------------------~FN 98 (287)
T 3lw6_A 49 SVHKMALLVPFRDRFEELLQFVPHMTAFLKRQG---VAHHIFVLNQVDRF---------------------------RFN 98 (287)
T ss_dssp CCCEEEEEEEESSCHHHHHHHHHHHHHHHHHTT---CEEEEEEEEECSSS---------------------------CCC
T ss_pred CcceEEEEEEeCCHHHHHHHHHHHHHHHHHHcC---CceEEEEEecCCCC---------------------------ccc
Confidence 34689999999999987777765543 343 24668888764211 112
Q ss_pred cchhhHHHHHhhcccCCccEEEEEcCCCCCCHHHHHHHHHHhhcCCCeeEEEeeeEeecCCCChHHHhhhhhhhhhhHHH
Q 005700 295 YKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDINLSFHFEVE 374 (682)
Q Consensus 295 ~KagaLn~gl~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~~~~~p~vg~Vqg~~~~~n~~~~l~t~~~~~~~~~~~~~~ 374 (682)
++..+|.|+..+ ..++|++++-|.|..|..|.... ..|+. ..+.. ...+ .+.+.+
T Consensus 99 -Ra~LlNvGf~ea-~~~~d~~ifHDVDLlP~dd~n~Y------~c~~~---~~P~H-ls~~--------~~~~~~----- 153 (287)
T 3lw6_A 99 -RASLINVGFQFA-SDVYDYIAMHDVDLLPLNDNLLY------EYPSS---LGPLH-IAGP--------KLHPKY----- 153 (287)
T ss_dssp -HHHHHHHHHHHS-CTTCCEEEEECTTEEECCTTSCC------CCCCT---TCCEE-SSCT--------TTCSSC-----
T ss_pred -hhheecccHHHH-hccCCEEEEecccccccCCCccc------cCCCC---CCceE-Eeec--------cccCCC-----
Confidence 777788888864 35689999999999886442110 00110 01111 1110 001100
Q ss_pred HhhccccccccccccceEEEEeeeehhcCCCCCCCc---hhHHHHHHHHHHcCCeEEEecCc------eeee--------
Q 005700 375 QQVNGVFINFFGFNGTAGVWRIKALEDSGGWMERTT---VEDMDIAVRAHLRGWKFIFLNDV------ECQC-------- 437 (682)
Q Consensus 375 ~~~~~~~~~~~~~~G~~~~~Rr~al~~iGG~~~~~~---~ED~~l~~rl~~~G~ki~y~~~a------~~~~-------- 437 (682)
....+.|..++++++.+.++|||++... .||.|+..|+..+|+++.-.+.. ...+
T Consensus 154 --------~Y~~~~GGv~a~~re~f~kVNGFsn~f~GWGgEDdD~~~Rl~~~G~~i~Rp~~~~~gry~m~~H~hd~~~r~ 225 (287)
T 3lw6_A 154 --------HYDNFVGGILLVRREHFKQMNGMSNQYWGWGLEDDEFFVRIRDAGLQVTRPQNIKTGTNDTFSHIHNRYHRK 225 (287)
T ss_dssp --------CCTTCCCSEEEEEHHHHHHTTSCCSCCCSSSSHHHHHHHHHHHTTCCCBCCSSCCCCTTTSEEECCCTTTSC
T ss_pred --------CcCCccccEEeccHHHHHHcCCCCCcCcCCCccchHHHHHHHHcCCcEEcCCCccccceeEEeccccccccC
Confidence 1123678899999999999999988754 69999999999999998765542 1222
Q ss_pred -ccCcCHHHHHHHhHhhhchhhHHHH
Q 005700 438 -ELPESYEAYRKQQHRWHSGPMQLFR 462 (682)
Q Consensus 438 -e~p~t~~~~~~Qr~RW~~G~~~~~~ 462 (682)
..|..+.....+++||..+.++.+.
T Consensus 226 rd~~k~~~~~~~~~~r~~~dGLnsl~ 251 (287)
T 3lw6_A 226 RDTQKCFNQKEMTRKRDHKTGLDNVK 251 (287)
T ss_dssp CCCCCCTTHHHHHTSCCSSCSGGGCC
T ss_pred CcccchhhhhhhhcEEccCCCCeeeE
Confidence 1233455667888999888777653
No 20
>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}
Probab=94.98 E-value=0.043 Score=52.35 Aligned_cols=103 Identities=13% Similarity=0.108 Sum_probs=62.8
Q ss_pred cCCccEEEEEcCC---CCCCHHHHHHHHHHhhcCCCeeEEEeeeEeecCCCChHHHhhhhhhhhhhHHHHhhcccccccc
Q 005700 309 VKDYEFVAIFDAD---FQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDINLSFHFEVEQQVNGVFINFF 385 (682)
Q Consensus 309 ~a~~d~Vl~lDaD---~~~~pd~L~~lv~~~~~~p~vg~Vqg~~~~~n~~~~l~t~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (682)
..++|+++++||| ...+|+.+.+++. . +.++|.|.....+.+ . .+...+ .+. . ... ...+.
T Consensus 51 ~~~~dhllfIDAD~~~I~FdPe~V~rLl~---~--g~DVV~GsYp~K~~~-~-~s~~a~-~y~----~--~i~--~~~V~ 114 (203)
T 2c0n_A 51 MKDYDTLAFLDEDVVPIEIDFQKVEAKFN---E--GYDVVCGYYYLKTLR-G-YSVYRK-DWE----K--EIF--DGEVN 114 (203)
T ss_dssp CTTCCEEEEECTTEEEEECCHHHHHHHHH---H--TCSEEEEECBCTTSS-S-BSEESS-SBC----S--SCC--CEECS
T ss_pred cCCCCEEEEEeCCCCccccCHHHHHHHHh---C--CCCEEEEEeeccCCC-c-cchHHH-HHH----H--hcc--Cceee
Confidence 5678999999999 9999999999882 2 445777754332211 1 000000 000 0 000 01233
Q ss_pred ccccceEEEEeeeehhcC-C-C-------CCCCchhHHHHHHHHHHcCCeE
Q 005700 386 GFNGTAGVWRIKALEDSG-G-W-------MERTTVEDMDIAVRAHLRGWKF 427 (682)
Q Consensus 386 ~~~G~~~~~Rr~al~~iG-G-~-------~~~~~~ED~~l~~rl~~~G~ki 427 (682)
..++.++++||++++.+- . | .....+||..++..+..+|+-+
T Consensus 115 d~~tGF~lIkR~V~e~L~~p~fl~~~~~e~~~~~gEdv~F~~~~k~~~~~~ 165 (203)
T 2c0n_A 115 GCGLGFTFIKREFLEKIKRPAFLAFKPIESPHWIGEDVYFFSTHKPRTYAL 165 (203)
T ss_dssp EECSSEEEEEHHHHTTSCSSCCCC---------CCHHHHHHHHHCCCEEEE
T ss_pred eccccEEEEhHHHHHHHhhhhhhcCChhhhccccCCceEEEeccccccccc
Confidence 345667889999999873 2 2 1235689999999998888776
No 21
>4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A
Probab=92.28 E-value=0.89 Score=45.47 Aligned_cols=94 Identities=10% Similarity=0.089 Sum_probs=58.8
Q ss_pred hHHHHHHH-HHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCCeEEEEeccCCCCcchhhHHHHHhhcccCC
Q 005700 233 KEVYQQSI-AAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKD 311 (682)
Q Consensus 233 ~~~l~~tL-~Sl~~qdYP~~~l~ViVvDD~sdd~t~~~l~~~~~~~~~~~v~v~~~~r~~~~g~KagaLn~gl~~~~~a~ 311 (682)
...+..++ +.+.+.. -++ |+|+-| ++...+.++ ..++++++.. +...++. +.+..+++.....+
T Consensus 26 kPli~~~i~~~~~~~~--~~~--vvVvt~--~~~i~~~~~-------~~g~~v~~~~-~~~~~Gt-~~i~~a~~~~~~~~ 90 (253)
T 4fcu_A 26 RPMILRVVDQAKKVEG--FDD--LCVATD--DERIAEICR-------AEGVDVVLTS-ADHPSGT-DRLSEVARIKGWDA 90 (253)
T ss_dssp EEHHHHHHHHHHTCTT--CCE--EEEEES--CHHHHHHHH-------TTTCCEEECC-TTCCCHH-HHHHHHHHHHTCCT
T ss_pred eEhHHHHHHHHHHhcC--CCE--EEEECC--HHHHHHHHH-------HcCCeEEEeC-CCCCChH-HHHHHHHHhcCcCC
Confidence 35788888 8887643 334 334433 244433322 4577776542 2222223 35666666432235
Q ss_pred ccEEEEEcCCC-CCCHHHHHHHHHHhhcCCC
Q 005700 312 YEFVAIFDADF-QPNPDFLRRTVPHFKDNEE 341 (682)
Q Consensus 312 ~d~Vl~lDaD~-~~~pd~L~~lv~~~~~~p~ 341 (682)
.|+++++++|. .++++.+++++..+.++++
T Consensus 91 ~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~ 121 (253)
T 4fcu_A 91 DDIIVNVQGDEPLLPAQLVQQVAKLLVDKPN 121 (253)
T ss_dssp TCEEEECCTTCTTCCHHHHHHHHHHHHHCTT
T ss_pred CCEEEEEeCCcccCCHHHHHHHHHHHHhCCC
Confidence 79999999999 7899999999999976654
No 22
>3cu0_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 3; glcat-I, glycosyltransferase, heparan sulfate biosynthesis, glycoprotein; HET: GAL UDP; 1.90A {Homo sapiens} SCOP: c.68.1.7 PDB: 1kws_A* 1fgg_A*
Probab=92.14 E-value=1.1 Score=45.09 Aligned_cols=104 Identities=13% Similarity=0.141 Sum_probs=65.7
Q ss_pred CCCCeEEEEeecCCch---HHHHHHHHHHHcCCCCCCceEEEEEcCCC--ChhHHHHHHHHHHHHhhcCCeEEEEeccCC
Q 005700 218 GFFPMVLVQIPMCNEK---EVYQQSIAAVCNLDWPKSKILIQVLDDSD--DPTAQTLIKEEVLKWQEAGANIVYRHRILR 292 (682)
Q Consensus 218 ~~~P~VsVvIP~yNE~---~~l~~tL~Sl~~qdYP~~~l~ViVvDD~s--dd~t~~~l~~~~~~~~~~~v~v~~~~r~~~ 292 (682)
...|.|-||-|+|... ..+.+.-..+.. -| .+.=|||+|+. ++.+.++++ +-|+...+..-..+
T Consensus 18 ~~~p~IivVTPTy~R~~Q~a~LtRLa~TL~~--Vp--~L~WIVVEd~~~~t~~va~lL~-------rsGl~y~HL~~~~p 86 (281)
T 3cu0_A 18 GSHMTIYVVTPTYARLVQKAELVRLSQTLSL--VP--RLHWLLVEDAEGPTPLVSGLLA-------ASGLLFTHLVVLTP 86 (281)
T ss_dssp ---CEEEEEEEECCSTTHHHHHHHHHHHHTT--SS--SEEEEEEESSSSCCHHHHHHHH-------HHCSEEEEEECCCC
T ss_pred CCCCeEEEEeCCCCCcchhHHHHHHHHHHhc--CC--ceEEEEEcCCCCCCHHHHHHHH-------HcCCceEEeccCCC
Confidence 5689999999999987 233333333332 24 46677889863 577777766 56777777654433
Q ss_pred CCcc-------------hhhHHHHHhhcc--------cC------CccEEEEEcCCCCCCHHHHHHH
Q 005700 293 DGYK-------------AGNLKSAMNCSY--------VK------DYEFVAIFDADFQPNPDFLRRT 332 (682)
Q Consensus 293 ~g~K-------------agaLn~gl~~~~--------~a------~~d~Vl~lDaD~~~~pd~L~~l 332 (682)
.++| ....|.|++... .. ..-+|.|.|+|...+-+..+++
T Consensus 87 ~~~~~~~~dp~w~~~rg~~QRN~AL~~Ir~~~~~~~~~~~~~~~~~~GVVyFADDDNtYsl~LFdem 153 (281)
T 3cu0_A 87 KAQRLREGEPGWVHPRGVEQRNKALDWLRGRGGAVGGEKDPPPPGTQGVVYFADDDNTYSRELFEEM 153 (281)
T ss_dssp -----------CCCCCSHHHHHHHHHHHTTCCCEEEECCSCCCTTCCEEEEECCTTSEECHHHHHHH
T ss_pred ccccccccccccccchhHHHHHHHHHHHHhhccccchhccccccCCceeEEEecCCCcccHHHHHHh
Confidence 3222 346888987653 11 2358899999999998887763
No 23
>1v84_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 1; glycoprotein, glycocyltransferase, HNK-1 epitop; HET: GAL NDG NAG TLA UDP; 1.82A {Homo sapiens} SCOP: c.68.1.7 PDB: 1v83_A* 1v82_A*
Probab=91.59 E-value=0.77 Score=45.65 Aligned_cols=102 Identities=16% Similarity=0.204 Sum_probs=67.2
Q ss_pred CCeEEEEeecCCch---HHHHHHHHHHHcCCCCCCceEEEEEcCCC--ChhHHHHHHHHHHHHhhcCCeEEEEeccCCCC
Q 005700 220 FPMVLVQIPMCNEK---EVYQQSIAAVCNLDWPKSKILIQVLDDSD--DPTAQTLIKEEVLKWQEAGANIVYRHRILRDG 294 (682)
Q Consensus 220 ~P~VsVvIP~yNE~---~~l~~tL~Sl~~qdYP~~~l~ViVvDD~s--dd~t~~~l~~~~~~~~~~~v~v~~~~r~~~~g 294 (682)
.|.+-||-|+|... ..+.+.-..+.. -| .++=|||+|+. ++.+.++++ +.|+...+..-....+
T Consensus 2 ~p~I~vVTPTy~R~~Q~a~LtRLa~TL~~--Vp--~L~WIVVEd~~~~t~~va~lL~-------~sgl~y~HL~~~~p~~ 70 (253)
T 1v84_A 2 LPTIHVVTPTYSRPVQKAELTRMANTLLH--VP--NLHWLVVEDAPRRTPLTARLLR-------DTGLNYTHLHVETPRN 70 (253)
T ss_dssp CCEEEEEEEECCSTTHHHHHHHHHHHHTT--SS--SEEEEEEESSSSCCHHHHHHHH-------HHCCEEEEEECCCCHH
T ss_pred CCEEEEEeCCCCccchhHHHHHHhhhhcc--CC--ceEEEEEeCCCCCCHHHHHHHH-------HcCCceEEeecCCCcc
Confidence 68999999999987 334444444422 25 46677888854 577777766 5677777664432111
Q ss_pred c-------------chhhHHHHHhhccc------CCccEEEEEcCCCCCCHHHHHHH
Q 005700 295 Y-------------KAGNLKSAMNCSYV------KDYEFVAIFDADFQPNPDFLRRT 332 (682)
Q Consensus 295 ~-------------KagaLn~gl~~~~~------a~~d~Vl~lDaD~~~~pd~L~~l 332 (682)
+ -....|.|++.... ...-+|.|.|+|...+-+..+++
T Consensus 71 ~~~~~~~~~~~~~rg~~qRn~AL~~Ir~~~~~~~~~~GVVyFADDdNtYdl~LF~em 127 (253)
T 1v84_A 71 YKLRGDARDPRIPRGTMQRNLALRWLRETFPRNSSQPGVVYFADDDNTYSLELFEEM 127 (253)
T ss_dssp HHCC-------CCTTHHHHHHHHHHHHHHSCSSSCCCEEEEECCTTSEECHHHHHHH
T ss_pred ccccccccCccccchHHHHHHHHHHHHHhcccccccceeEEEecCCCcccHHHHHHH
Confidence 1 12367888876521 23468899999999998888774
No 24
>2d0j_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 2; rossmann-like fold, glucuronyltransferase; 2.00A {Homo sapiens}
Probab=90.62 E-value=1.6 Score=43.19 Aligned_cols=102 Identities=10% Similarity=0.114 Sum_probs=65.1
Q ss_pred CCeEEEEeecCCch---HHHHHHHHHHHcCCCCCCceEEEEEcCCCC--hhHHHHHHHHHHHHhhcCCeEEEEeccCCCC
Q 005700 220 FPMVLVQIPMCNEK---EVYQQSIAAVCNLDWPKSKILIQVLDDSDD--PTAQTLIKEEVLKWQEAGANIVYRHRILRDG 294 (682)
Q Consensus 220 ~P~VsVvIP~yNE~---~~l~~tL~Sl~~qdYP~~~l~ViVvDD~sd--d~t~~~l~~~~~~~~~~~v~v~~~~r~~~~g 294 (682)
.|.+-||-|+|... ..+.+.-..+.. -|+ ++=|||+|+.+ +.+.++++ +.|+...+..-....+
T Consensus 2 ~p~I~vVTPTy~R~~Q~a~LtRLa~TL~~--Vp~--l~WIVVEd~~~~~~~v~~lL~-------~sgl~y~HL~~~~~~~ 70 (246)
T 2d0j_A 2 LPTIYAITPTYSRPVQKAELTRLANTFRQ--VAQ--LHWILVEDAAARSELVSRFLA-------RAGLPSTHLHVPTPRR 70 (246)
T ss_dssp CCCEEEEEEECCSTTHHHHHHHHHHHHTT--STT--EEEEEEESSSSCCHHHHHHHH-------HSCSCEEEEECCCCCC
T ss_pred CCEEEEEeCCCCccchhHHHHHHHHHHhc--CCc--eEEEEEcCCCCCCHHHHHHHH-------HcCCceEEEecCCccc
Confidence 68899999999987 333333333332 253 66778888653 44555555 6778877765432222
Q ss_pred cc-------hhhHHHHHhhccc------CCccEEEEEcCCCCCCHHHHHHH
Q 005700 295 YK-------AGNLKSAMNCSYV------KDYEFVAIFDADFQPNPDFLRRT 332 (682)
Q Consensus 295 ~K-------agaLn~gl~~~~~------a~~d~Vl~lDaD~~~~pd~L~~l 332 (682)
+| ..+.|.|++.... ...-+|.|.|.|...+-+..+++
T Consensus 71 ~~~~~~prg~~qRn~AL~~Ir~~~~~~~~~~GVVyFADDdNtY~l~LF~em 121 (246)
T 2d0j_A 71 YKRPGLPRATEQRNAGLAWLRQRHQHQRAQPGVLFFADDDNTYSLELFQEM 121 (246)
T ss_dssp ----CCCCCHHHHHHHHHHHHHHSCSSSCCCCEEEECCTTCEECTHHHHHH
T ss_pred cCCCCCcchHHHHHHHHHHHHHhcccccCccceEEEccCCCcccHHHHHHH
Confidence 22 2567888876411 13468999999999998877773
No 25
>3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0
Probab=90.42 E-value=2.2 Score=42.60 Aligned_cols=183 Identities=13% Similarity=0.150 Sum_probs=93.6
Q ss_pred HHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCCeEEEEeccCCCCcchhhHHHHHhhcccCCcc
Q 005700 234 EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKDYE 313 (682)
Q Consensus 234 ~~l~~tL~Sl~~qdYP~~~l~ViVvDD~sdd~t~~~l~~~~~~~~~~~v~v~~~~r~~~~g~KagaLn~gl~~~~~a~~d 313 (682)
..+..+++.+.+.. -++ |+|+-| ++...+.++ ..|.++++.......| ..+ +..+++.....+.|
T Consensus 35 Pli~~~l~~l~~~~--i~~--VvVvt~--~~~i~~~~~-------~~g~~v~~~~~~~~~G-t~~-i~~a~~~l~~~~~d 99 (256)
T 3tqd_A 35 PMIQHVYESAIKSG--AEE--VVIATD--DKRIRQVAE-------DFGAVVCMTSSDHQSG-TER-IAEAAVALGFEDDE 99 (256)
T ss_dssp EHHHHHHHHHHHTT--CSE--EEEEES--CHHHHHHHH-------HTTCEEEECCTTCCSH-HHH-HHHHHHHTTCCTTC
T ss_pred hHHHHHHHHHHhCC--CCE--EEEECC--HHHHHHHHH-------HcCCeEEEeCCCCCCc-HHH-HHHHHHHhCcCCCC
Confidence 47888888888754 234 344433 344443332 4577777643333333 443 56666642123679
Q ss_pred EEEEEcCCC-CCCHHHHHHHHHHhhcCCCeeEEEeeeEeec----CCCChHHHhh-hhhhhhhhHHH-H-hhcccc----
Q 005700 314 FVAIFDADF-QPNPDFLRRTVPHFKDNEELGLVQARWSFVN----KDENLLTRLQ-DINLSFHFEVE-Q-QVNGVF---- 381 (682)
Q Consensus 314 ~Vl~lDaD~-~~~pd~L~~lv~~~~~~p~vg~Vqg~~~~~n----~~~~l~t~~~-~~~~~~~~~~~-~-~~~~~~---- 381 (682)
.++++++|. .++++.+++++..+.++++.++++......+ .+.+.+.-.. .-.....+... . ......
T Consensus 100 ~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~a~l~~~v~~~~~~~~p~~vkvv~d~~g~~l~fsr~pip~~r~~~~~~~ 179 (256)
T 3tqd_A 100 IIVCLQGDEPLIPPDAIRKLAEDLDEHDNVKVASLCTPITEVDELFNPHSTKVVLNRRNYALYFSHAPIPWGRDTFSDKE 179 (256)
T ss_dssp EEEEECTTCCCCCHHHHHHHHHHHHHCC--CEEEEEEECCCHHHHTCTTSCEEEECTTSBEEEEESSCSSCCTTTTTCGG
T ss_pred EEEEEeCCcccCCHHHHHHHHHHHHhCCCCCEEEEeeEcCCHHHhhCCCccEEEECCCCEEeEEecCCCCCCCccccccc
Confidence 999999999 6799999999999976554333322211110 0001000000 00000000000 0 000000
Q ss_pred ----ccccccccceEEEEeeeehhcCCCCCCCchhHHH--HHHHHHHcCCeEEEecC
Q 005700 382 ----INFFGFNGTAGVWRIKALEDSGGWMERTTVEDMD--IAVRAHLRGWKFIFLND 432 (682)
Q Consensus 382 ----~~~~~~~G~~~~~Rr~al~~iGG~~~~~~~ED~~--l~~rl~~~G~ki~y~~~ 432 (682)
......+....+||+++++....+.+. .-|..+ -.+|+..+|+++.....
T Consensus 180 ~~~~~~~~~~~~GiY~y~~~~l~~~~~l~~s-~lE~~e~leqlr~le~G~~i~~~~~ 235 (256)
T 3tqd_A 180 NLQLNGSHYRHVGIYAYRVGFLEEYLSWDAC-PAEKMEALEQLRILWHGGRIHMVVA 235 (256)
T ss_dssp GCCCSSCCEEEEEEEEEEHHHHHHHHHSCCC-HHHHHHTCTTHHHHHTTCCCEEEEC
T ss_pred ccccCCcceEEEEEEEcCHHHHHHHHhCCCC-cccchhhhHHHHHHHCCCeEEEEEe
Confidence 001113455788999999988666544 233322 23577899999877653
No 26
>3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A*
Probab=86.05 E-value=6.8 Score=39.22 Aligned_cols=177 Identities=9% Similarity=0.077 Sum_probs=91.6
Q ss_pred HHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCCeEEEEeccCCCCcchhhHHHHHhhcccCCcc
Q 005700 234 EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKDYE 313 (682)
Q Consensus 234 ~~l~~tL~Sl~~qdYP~~~l~ViVvDD~sdd~t~~~l~~~~~~~~~~~v~v~~~~r~~~~g~KagaLn~gl~~~~~a~~d 313 (682)
..+..+++.+.+.. -++ |+|+-| ++...+.++ ..++++++..... .++..+ +..+++.....+.|
T Consensus 44 Pmi~~~l~~l~~~~--i~~--IvV~t~--~~~i~~~~~-------~~g~~v~~~~~~~-~~Gt~~-i~~~~~~l~~~~~d 108 (264)
T 3k8d_A 44 PMIVHVLERARESG--AER--IIVATD--HEDVARAVE-------AAGGEVCMTRADH-QSGTER-LAEVVEKCAFSDDT 108 (264)
T ss_dssp EHHHHHHHHHHHTT--CSE--EEEEES--CHHHHHHHH-------HTTCEEEECCTTC-CSHHHH-HHHHHHHHTCCTTC
T ss_pred EHHHHHHHHHHhCC--CCE--EEEECC--HHHHHHHHH-------HcCCEEEEecCCC-CCCHHH-HHHHHHHhccCCCC
Confidence 47888998888764 235 334433 344433332 4567776543222 233444 55555532123679
Q ss_pred EEEEEcCCC-CCCHHHHHHHHHHhhcC-CCeeEEEeeeE------------e-ecCCCChHHHhhhhhhh-hhhHHHHh-
Q 005700 314 FVAIFDADF-QPNPDFLRRTVPHFKDN-EELGLVQARWS------------F-VNKDENLLTRLQDINLS-FHFEVEQQ- 376 (682)
Q Consensus 314 ~Vl~lDaD~-~~~pd~L~~lv~~~~~~-p~vg~Vqg~~~------------~-~n~~~~l~t~~~~~~~~-~~~~~~~~- 376 (682)
+++++++|. .++++.+++++..+.+. .++..+..+.. . .+.+.. ...++-. .-+.....
T Consensus 109 ~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~~~~~~v~d~~~~~~p~~vkVv~d~~g~----~l~fsr~~ip~~r~~~~ 184 (264)
T 3k8d_A 109 VIVNVQGDEPMIPATIIRQVADNLAQRQVGMATLAVPIHNAEEAFNPNAVKVVLDAEGY----ALYFSRATIPWDRDRFA 184 (264)
T ss_dssp EEEEECTTCTTCCHHHHHHHHHHHHTSSCSEEEEEEECCSHHHHTCTTSCEEEECTTSB----EEEEESSCCSCCHHHHH
T ss_pred EEEEEcCCcccCCHHHHHHHHHHHhhcCCCEEEEEEEcCCHHHccCCCceEEEECCCCe----EEEEecCCCCCCCcccc
Confidence 999999999 67999999999998742 23333333211 0 111111 0000000 00000000
Q ss_pred hcc-ccccccccccceEEEEeeeehhcCCCCCCCchhHHH--HHHHHHHcCCeEEEe
Q 005700 377 VNG-VFINFFGFNGTAGVWRIKALEDSGGWMERTTVEDMD--IAVRAHLRGWKFIFL 430 (682)
Q Consensus 377 ~~~-~~~~~~~~~G~~~~~Rr~al~~iGG~~~~~~~ED~~--l~~rl~~~G~ki~y~ 430 (682)
... ......-.+....+||++++++.-.+++. ..|..+ -.+|+..+|+++...
T Consensus 185 ~~~~~~~~~~~~~~GiY~y~~~~l~~~~~~~~~-~lE~~e~leqlr~le~G~~I~~~ 240 (264)
T 3k8d_A 185 EGLETVGDNFLRHLGIYGYRAGFIRRYVNWQPS-PLEHIEMLEQLRVLWYGEKIHVA 240 (264)
T ss_dssp HCSSCCCSCCEEECSEEEEEHHHHHHHHHSCCC-HHHHHHTCTTHHHHHTTCCEEEE
T ss_pred ccccccCCcceEEEEEEEECHHHHHHHHhCCCC-hhhhHHHHHHHHHHHCCCceEEE
Confidence 000 00001114566788999999987555433 233222 235778999998875
No 27
>1omz_A Alpha-1,4-N-acetylhexosaminyltransferase EXTL2; rossmann fold, DXD motif; HET: UD2; 2.10A {Mus musculus} SCOP: c.68.1.15 PDB: 1omx_A* 1on6_A* 1on8_A*
Probab=85.23 E-value=3.2 Score=42.25 Aligned_cols=116 Identities=6% Similarity=0.033 Sum_probs=72.8
Q ss_pred CCCeEEEEeecCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCC-hhHHHHHHHHHHHHhhcCCeEEEEeccCCCCcch
Q 005700 219 FFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDD-PTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKA 297 (682)
Q Consensus 219 ~~P~VsVvIP~yNE~~~l~~tL~Sl~~qdYP~~~l~ViVvDD~sd-d~t~~~l~~~~~~~~~~~v~v~~~~r~~~~g~Ka 297 (682)
.....+|+|-+|+..+.+.+.|..+.+..+-. +|+|+=++.. +...... ......++.+.++....
T Consensus 26 ~~~~FTvvi~ty~R~~~L~~lv~~~~~~~~v~---~IvVvWn~~~~~pp~~~~----~~~~~~~vpv~v~~~~~------ 92 (293)
T 1omz_A 26 ALDSFTLIMQTYNRTDLLLRLLNHYQAVPSLH---KVIVVWNNVGEKGPEELW----NSLGPHPIPVIFKPQTA------ 92 (293)
T ss_dssp CTTCEEEEEEESSCHHHHHHHHHHHTTSTTEE---EEEEEECCTTCCCTHHHH----HHTCCCSSCEEEEECSS------
T ss_pred CCCceEEEEEeecccHHHHHHHHHHhcCCCCC---eEEEEeCCCCCCCChhhc----cccCCCCccEEEEeCCC------
Confidence 34579999999999999999998886654322 3555555432 2222111 11122246666553222
Q ss_pred hhHHHHHhhcccCCccEEEEEcCCCCCCHHHHHHHHHHhhcCCCeeEEEee
Q 005700 298 GNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQAR 348 (682)
Q Consensus 298 gaLn~gl~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~~~~~p~vg~Vqg~ 348 (682)
..+|.-+.-...-+.|-|+.+|+|..++.+.|+.....-+++|+- +|+..
T Consensus 93 nsLnnRF~p~~~i~T~AVLslDDDv~l~~~el~faF~vWr~~PdR-lVGf~ 142 (293)
T 1omz_A 93 NKMRNRLQVFPEVETNAVLMVDDDTLISAQDLVFAFSIWQQFPDQ-IIGFV 142 (293)
T ss_dssp CCGGGGGSCCTTCCSSEEEEECTTEEECHHHHHHHHHHHTTSTTS-EEESC
T ss_pred CchhhccCCCccCCcCEEEEEcCCCCCCHHHHHHHHHHHHHCccc-eecCc
Confidence 123333332224678999999999999999999988888888872 44433
No 28
>2waw_A MOBA relate protein; unknown function; HET: PGE; 1.60A {Mycobacterium SP}
Probab=83.12 E-value=7.5 Score=36.23 Aligned_cols=90 Identities=12% Similarity=0.024 Sum_probs=55.9
Q ss_pred chHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCCeEEEEeccCCCCcchhhHHHHHhhcccCC
Q 005700 232 EKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKD 311 (682)
Q Consensus 232 E~~~l~~tL~Sl~~qdYP~~~l~ViVvDD~sdd~t~~~l~~~~~~~~~~~v~v~~~~r~~~~g~KagaLn~gl~~~~~a~ 311 (682)
....+..+++.+.+.. -++ |+|+-+...+...+.+ ...++++++. +....+-.+++..|++.. ..+
T Consensus 30 g~pli~~~l~~l~~~~--~~~--i~vv~~~~~~~~~~~~-------~~~~~~~~~~--~~~~~g~~~~i~~al~~~-~~~ 95 (199)
T 2waw_A 30 DTTLLGATLAMARRCP--FDQ--LIVTLGGAADEVLEKV-------ELDGLDIVLV--DDAGLGCSSSLKSALTWV-DPT 95 (199)
T ss_dssp TEEHHHHHHHHHHTSS--CSE--EEEEECTTHHHHHHHS-------CCTTSEEEEC--CCCCTTCCCHHHHHHHTS-CTT
T ss_pred ccCHHHHHHHHHHhCC--CCc--EEEEeCCCHHHHHHHh-------ccCCCEEEEC--CCcccCHHHHHHHHHHhh-hcc
Confidence 3468889999988764 224 4444433222222211 1346666542 222223677888888842 125
Q ss_pred ccEEEEEcCCCC-CCHHHHHHHHHH
Q 005700 312 YEFVAIFDADFQ-PNPDFLRRTVPH 335 (682)
Q Consensus 312 ~d~Vl~lDaD~~-~~pd~L~~lv~~ 335 (682)
.|.++++++|+- ++++.+++++..
T Consensus 96 ~~~vlv~~~D~P~~~~~~i~~l~~~ 120 (199)
T 2waw_A 96 AEGIVLMLGDQPGITASAVASLIAG 120 (199)
T ss_dssp CSEEEEEETTCTTCCHHHHHHHHHH
T ss_pred CCeEEEEeCCcccCCHHHHHHHHhh
Confidence 789999999995 689999999987
No 29
>3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13
Probab=82.92 E-value=11 Score=37.19 Aligned_cols=91 Identities=12% Similarity=0.164 Sum_probs=56.9
Q ss_pred hHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCCeEEEEeccCCCCcchhhHHHHHhhcccCCc
Q 005700 233 KEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKDY 312 (682)
Q Consensus 233 ~~~l~~tL~Sl~~qdYP~~~l~ViVvDD~sdd~t~~~l~~~~~~~~~~~v~v~~~~r~~~~g~KagaLn~gl~~~~~a~~ 312 (682)
...+..+++.+.+.. -+++ +|+-| ++...+.++ +.++++++.......| .++ +..+++.....+.
T Consensus 27 kPli~~~l~~l~~~~--~~~i--vVv~~--~~~i~~~~~-------~~g~~v~~~~~~~~~G-t~~-~~~~~~~l~~~~~ 91 (252)
T 3oam_A 27 KPMIQWVYEQAMQAG--ADRV--IIATD--DERVEQAVQ-------AFGGVVCMTSPNHQSG-TER-LAEVVAKMAIPAD 91 (252)
T ss_dssp EEHHHHHHHHHHHTT--CSEE--EEEES--CHHHHHHHH-------HTTCEEEECCTTCCSH-HHH-HHHHHHHTTCCTT
T ss_pred EEHHHHHHHHHHhCC--CCeE--EEECC--HHHHHHHHH-------HcCCEEEEcCCCCCCc-HHH-HHHHHHhcCcCCC
Confidence 357888888888765 2353 33333 244433332 4577877653333333 444 4445553211367
Q ss_pred cEEEEEcCCC-CCCHHHHHHHHHHhhc
Q 005700 313 EFVAIFDADF-QPNPDFLRRTVPHFKD 338 (682)
Q Consensus 313 d~Vl~lDaD~-~~~pd~L~~lv~~~~~ 338 (682)
|.++++++|. .++++.+++++..+.+
T Consensus 92 d~vlv~~gD~Pli~~~~i~~l~~~~~~ 118 (252)
T 3oam_A 92 HIVVNVQGDEPLIPPAIIRQVADNLAA 118 (252)
T ss_dssp SEEEECCTTCTTCCHHHHHHHHHHHHH
T ss_pred CEEEEEeCCeeecCHHHHHHHHHHHHh
Confidence 9999999999 6799999999998875
No 30
>1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13
Probab=82.83 E-value=26 Score=33.62 Aligned_cols=93 Identities=12% Similarity=0.113 Sum_probs=56.1
Q ss_pred hHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCCeEEEEecc--CCCCcchhhHHHHHhhcccC
Q 005700 233 KEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRI--LRDGYKAGNLKSAMNCSYVK 310 (682)
Q Consensus 233 ~~~l~~tL~Sl~~qdYP~~~l~ViVvDD~sdd~t~~~l~~~~~~~~~~~v~v~~~~r~--~~~g~KagaLn~gl~~~~~a 310 (682)
...+..+++.+.+...- ++ |+|+-| ++...+.+ . ..+++++..... ....+-.+++..+++.. .
T Consensus 28 kpli~~~i~~~~~~~~~-~~--ivv~~~--~~~i~~~~----~---~~g~~~~~~~~~~~~~~~~~~~~v~~al~~~--~ 93 (229)
T 1qwj_A 28 VPLIGWVLRAALDAGVF-QS--VWVSTD--HDEIENVA----K---QFGAQVHRRSSETSKDSSTSLDAIVEFLNYH--N 93 (229)
T ss_dssp EEHHHHHHHHHHHHTCC-SE--EEEEES--CHHHHHHH----H---HTTCEEEECCGGGSSTTCCHHHHHHHHHTTC--T
T ss_pred EEHHHHHHHHHHhCCCc-CE--EEEECC--hHHHHHHH----H---HcCCEEEeChhhhcCCCCcHHHHHHHHHHhc--C
Confidence 35788888888775421 24 334333 33333332 2 346776432211 11112235677777742 3
Q ss_pred CccEEEEEcCCC-CCCHHHHHHHHHHhhcC
Q 005700 311 DYEFVAIFDADF-QPNPDFLRRTVPHFKDN 339 (682)
Q Consensus 311 ~~d~Vl~lDaD~-~~~pd~L~~lv~~~~~~ 339 (682)
+.|.++++++|+ .++++.+++++..+..+
T Consensus 94 ~~d~vlv~~~D~Pli~~~~i~~l~~~~~~~ 123 (229)
T 1qwj_A 94 EVDIVGNIQATSPCLHPTDLQKVAEMIREE 123 (229)
T ss_dssp TCSEEEEECTTCTTCCHHHHHHHHHHHHSS
T ss_pred CCCEEEEecCCCCcCCHHHHHHHHHHHHhC
Confidence 679999999999 57999999999988653
No 31
>2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A
Probab=80.35 E-value=7.9 Score=36.04 Aligned_cols=90 Identities=13% Similarity=0.102 Sum_probs=54.6
Q ss_pred chHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCCeEEEEeccCCCCcchhhHHHHHhhcccCC
Q 005700 232 EKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKD 311 (682)
Q Consensus 232 E~~~l~~tL~Sl~~qdYP~~~l~ViVvDD~sdd~t~~~l~~~~~~~~~~~v~v~~~~r~~~~g~KagaLn~gl~~~~~a~ 311 (682)
....+..+++.+.+.. -++ |+|+-+...+.. ++. ....++++++. +....+-.+++..|++.. ..+
T Consensus 30 g~pll~~~l~~l~~~~--~~~--i~vv~~~~~~~~----~~~---~~~~~~~~~~~--~~~~~g~~~~i~~al~~~-~~~ 95 (197)
T 2wee_A 30 DTTVLGATLDVARQAG--FDQ--LILTLGGAASAV----RAA---MALDGTDVVVV--EDVERGCAASLRVALARV-HPR 95 (197)
T ss_dssp TEEHHHHHHHHHHHTT--CSE--EEEEECTTHHHH----HHH---SCCTTSEEEEC--C----CCHHHHHHHHTTS-CTT
T ss_pred CccHHHHHHHHHHhcC--CCc--EEEEeCCCHHHH----HHH---hccCCCEEEEC--CCcccCHHHHHHHHHHHh-ccc
Confidence 3468888999887754 224 444433222222 221 11345665542 221123677888888742 125
Q ss_pred ccEEEEEcCCC-CCCHHHHHHHHHH
Q 005700 312 YEFVAIFDADF-QPNPDFLRRTVPH 335 (682)
Q Consensus 312 ~d~Vl~lDaD~-~~~pd~L~~lv~~ 335 (682)
.|.++++++|. .++++.+++++..
T Consensus 96 ~~~vlv~~~D~P~~~~~~i~~l~~~ 120 (197)
T 2wee_A 96 ATGIVLMLGDQPQVAPATLRRIIDV 120 (197)
T ss_dssp EEEEEEEETTCTTCCHHHHHHHHHH
T ss_pred CCeEEEEeCCcCCCCHHHHHHHHhh
Confidence 78999999999 6799999999987
No 32
>2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus}
Probab=79.47 E-value=12 Score=35.84 Aligned_cols=90 Identities=8% Similarity=0.095 Sum_probs=54.5
Q ss_pred chHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCCeEEEEeccCCCCcchhhHHHHHhhcccCC
Q 005700 232 EKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKD 311 (682)
Q Consensus 232 E~~~l~~tL~Sl~~qdYP~~~l~ViVvDD~sdd~t~~~l~~~~~~~~~~~v~v~~~~r~~~~g~KagaLn~gl~~~~~a~ 311 (682)
....+..+++.+.+. . +++ +++.++ +...+.+ . .. +++++.. +...++.++.+ .+++ ..+
T Consensus 26 g~pli~~~l~~~~~~--~-~~i-~v~~~~---~~i~~~~----~---~~-~~~~~~~-~~~~~g~~~~~-~~~~---~~~ 85 (234)
T 2y6p_A 26 GKPLIRWVVEGLVKT--G-ERV-ILATDS---ERVKEVV----E---DL-CEVFLTP-SDLPSGSDRVL-YVVR---DLD 85 (234)
T ss_dssp TEEHHHHHHHHHHTT--T-SCE-EEEESC---HHHHHHH----T---TT-SEEEECC-TTCCSHHHHHH-HHHT---TCC
T ss_pred CEEHHHHHHHHHHHh--C-CEE-EEECCh---HHHHHHH----H---hc-eEEEECC-cccccchHHHH-HHHH---hCC
Confidence 346888899988776 2 243 333332 3332222 1 22 5554432 22233355555 4555 335
Q ss_pred ccEEEEEcCCC-CCCHHHHHHHHHHhhcCCC
Q 005700 312 YEFVAIFDADF-QPNPDFLRRTVPHFKDNEE 341 (682)
Q Consensus 312 ~d~Vl~lDaD~-~~~pd~L~~lv~~~~~~p~ 341 (682)
.|+++++++|. ..++..+++++..+.++.+
T Consensus 86 ~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~~ 116 (234)
T 2y6p_A 86 VDLIINYQGDEPFVYEEDIKLIFRELEKGER 116 (234)
T ss_dssp CSEEEECCTTCCCCCHHHHHHHHHHHHHTCS
T ss_pred CCEEEEecCCcCcCCHHHHHHHHHHHHhCCC
Confidence 78999999999 8899999999998865444
No 33
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=73.19 E-value=19 Score=39.28 Aligned_cols=104 Identities=13% Similarity=0.081 Sum_probs=65.4
Q ss_pred EeecCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCCeEEEEeccCCCCcchhhHHHHHh
Q 005700 226 QIPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMN 305 (682)
Q Consensus 226 vIP~yNE~~~l~~tL~Sl~~qdYP~~~l~ViVvDD~sdd~t~~~l~~~~~~~~~~~v~v~~~~r~~~~g~KagaLn~gl~ 305 (682)
++|..|.+ .|.-.|+++.+... .+ |+|+-....+...+.+.+..+ ..+.++.|...+...| -++|+..++.
T Consensus 34 l~pv~gkp-~i~~~l~~~~~~g~--~~--i~vv~~~~~~~i~~~~~~~~~---~~~~~i~~~~q~~~lG-Ta~Av~~a~~ 104 (501)
T 3st8_A 34 LHTLAGRS-MLSHVLHAIAKLAP--QR--LIVVLGHDHQRIAPLVGELAD---TLGRTIDVALQDRPLG-TGHAVLCGLS 104 (501)
T ss_dssp GCEETTEE-HHHHHHHHHHHHCC--SE--EEEEECTTHHHHHHHHHHHHH---HHTSCCEEEECSSCCC-HHHHHHHHHT
T ss_pred HeEECChh-HHHHHHHHHHhCCC--CE--EEEEeCCCHHHHHHHHHHHHH---hcCCcEEEEEcCCCCC-cHHHHHHHHH
Confidence 46778875 77778888877652 24 444444444444444433222 3456666665555556 8899998887
Q ss_pred hcccCCccEEEEEcCCC-CCCHHHHHHHHHHhhc
Q 005700 306 CSYVKDYEFVAIFDADF-QPNPDFLRRTVPHFKD 338 (682)
Q Consensus 306 ~~~~a~~d~Vl~lDaD~-~~~pd~L~~lv~~~~~ 338 (682)
.......+.++++.+|+ ...++.+.+++.....
T Consensus 105 ~l~~~~~~~~lvl~gd~~l~~~~~~~~l~~~h~~ 138 (501)
T 3st8_A 105 ALPDDYAGNVVVTSGDTPLLDADTLADLIATHRA 138 (501)
T ss_dssp TSCTTCCSEEEEEETTCTTCCHHHHHHHHHHHHH
T ss_pred HhccccccceeeecCcceeecHHHHHHHHHHHhh
Confidence 53222335666666766 6789999999887765
No 34
>1h7e_A 3-deoxy-manno-octulosonate cytidylyltransferase; nucleotidyltransferase, CMP-KDO synthetase, nucleoside monophosphate glycosides; 1.83A {Escherichia coli} SCOP: c.68.1.13 PDB: 1gqc_A* 1gq9_A 1h6j_A 1h7f_A* 1h7g_A* 1h7h_A* 1h7t_A*
Probab=70.96 E-value=32 Score=33.13 Aligned_cols=92 Identities=11% Similarity=0.118 Sum_probs=54.9
Q ss_pred CchHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCCeEEEEeccCCCCcchhhHHHHHhhcccC
Q 005700 231 NEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVK 310 (682)
Q Consensus 231 NE~~~l~~tL~Sl~~qdYP~~~l~ViVvDD~sdd~t~~~l~~~~~~~~~~~v~v~~~~r~~~~g~KagaLn~gl~~~~~a 310 (682)
+....+..+++.+.+.... ++ |+|+-+. +...+.+ . ..++++++.. +...++-++.. .+++. .
T Consensus 25 ~g~pli~~~i~~~~~~~~~-~~--ivvv~~~--~~i~~~~----~---~~~~~~~~~~-~~~~~g~~~~~-~~~~~---~ 87 (245)
T 1h7e_A 25 VGKPMIQHVYERALQVAGV-AE--VWVATDD--PRVEQAV----Q---AFGGKAIMTR-NDHESGTDRLV-EVMHK---V 87 (245)
T ss_dssp TTEEHHHHHHHHHHTCTTC-CE--EEEEESC--HHHHHHH----H---HTTCEEEECC-SCCSSHHHHHH-HHHHH---S
T ss_pred CCchHHHHHHHHHHhCCCC-Ce--EEEECCc--HHHHHHH----H---HcCCeEEeCC-CccCCcHHHHH-HHHHh---C
Confidence 3446888899998876432 24 3333332 3333322 2 3466665421 22223344443 45552 2
Q ss_pred CccEEEEEcCCC-CCCHHHHHHHHHHhhcC
Q 005700 311 DYEFVAIFDADF-QPNPDFLRRTVPHFKDN 339 (682)
Q Consensus 311 ~~d~Vl~lDaD~-~~~pd~L~~lv~~~~~~ 339 (682)
+.|.++++++|. .++++.+++++..+.++
T Consensus 88 ~~~~~lv~~~D~P~~~~~~i~~l~~~~~~~ 117 (245)
T 1h7e_A 88 EADIYINLQGDEPMIRPRDVETLLQGMRDD 117 (245)
T ss_dssp CCSEEEECCTTCTTCCHHHHHHHHHHHHHC
T ss_pred CCCEEEEEcCCcCcCCHHHHHHHHHHHHhC
Confidence 578999999999 46999999999988654
No 35
>3f1c_A Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; structural genomics, PSI-2, protein structure initiative; 2.30A {Listeria monocytogenes str} SCOP: c.68.1.0
Probab=70.13 E-value=13 Score=36.44 Aligned_cols=98 Identities=10% Similarity=0.043 Sum_probs=57.5
Q ss_pred chHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCCeEEEEeccCCCCcchhhHHHHHhhccc--
Q 005700 232 EKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYV-- 309 (682)
Q Consensus 232 E~~~l~~tL~Sl~~qdYP~~~l~ViVvDD~sdd~t~~~l~~~~~~~~~~~v~v~~~~r~~~~g~KagaLn~gl~~~~~-- 309 (682)
....+..+++++.+.... +++ ++|+++...+...+. .+.+.. ...+.+.. ...+ ..+++..|++....
T Consensus 31 Gkpll~~~l~~~~~~~~~-~~i-vvv~~~~~~~~~~~~----~~~~~~-~~~~~~~~--~~~~-~~~sv~~al~~l~~~~ 100 (246)
T 3f1c_A 31 GKPIIVHTVEKFILNTRF-DKI-LISSPKEWMNHAEDN----IKKYIS-DDRIVVIE--GGED-RNETIMNGIRFVEKTY 100 (246)
T ss_dssp TEEHHHHHHHHHHTCTTC-SEE-EEEECGGGHHHHHHH----HHHHCC-CTTEEEEE--CCSS-HHHHHHHHHHHHHHHT
T ss_pred CeeHHHHHHHHHHcCCCC-CEE-EEEeCHHHHHHHHHH----HHHhCC-CCCEEEEC--CCCc-hHHHHHHHHHHHhhhh
Confidence 347899999998876432 243 333433221222222 332211 12233332 1223 56677777775311
Q ss_pred --CCccEEEEEcCCC-CCCHHHHHHHHHHhhcC
Q 005700 310 --KDYEFVAIFDADF-QPNPDFLRRTVPHFKDN 339 (682)
Q Consensus 310 --a~~d~Vl~lDaD~-~~~pd~L~~lv~~~~~~ 339 (682)
.+.|+|++.|+|. .++++.+++++..+.++
T Consensus 101 ~~~~~~~vlv~~~d~Pli~~~~i~~li~~~~~~ 133 (246)
T 3f1c_A 101 GLTDDDIIVTHDAVRPFLTHRIIEENIDAALET 133 (246)
T ss_dssp CCCTTCEEEEEETTCTTCCHHHHHHHHHHHHHT
T ss_pred cCCCCCEEEEecCcccCCCHHHHHHHHHHHHhc
Confidence 2378999999998 78999999999998764
No 36
>1vic_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics; 1.80A {Haemophilus influenzae} SCOP: c.68.1.13 PDB: 1vh3_A 3duv_A*
Probab=69.63 E-value=28 Score=34.14 Aligned_cols=92 Identities=13% Similarity=0.172 Sum_probs=53.9
Q ss_pred chHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCCeEEEEeccCCCCcchhhHHHHHhhcccCC
Q 005700 232 EKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKD 311 (682)
Q Consensus 232 E~~~l~~tL~Sl~~qdYP~~~l~ViVvDD~sdd~t~~~l~~~~~~~~~~~v~v~~~~r~~~~g~KagaLn~gl~~~~~a~ 311 (682)
....+..+++.+.+... ++ |+|+-+. +...+.+ . ..++++++.. +...++.+ .+..+++.....+
T Consensus 26 gkpli~~~l~~l~~~~~--~~--ivvv~~~--~~i~~~~----~---~~~~~~~~~~-~~~~~g~~-~~~~~~~~l~~~~ 90 (262)
T 1vic_A 26 GKPMIQHVFEKALQSGA--SR--VIIATDN--ENVADVA----K---SFGAEVCMTS-VNHNSGTE-RLAEVVEKLAIPD 90 (262)
T ss_dssp TEEHHHHHHHHHHHTTC--SE--EEEEESC--HHHHHHH----H---HTTCEEEECC-CSSCCHHH-HHHHHHHHTTCCT
T ss_pred CeEHHHHHHHHHHhCCC--ce--EEEECCc--HHHHHHH----H---hcCCEEEECC-ccccCChH-HHHHHHHHhccCC
Confidence 34688889999887653 34 4444332 3333322 2 3466664321 12223233 3333443211235
Q ss_pred ccEEEEEcCCC-CCCHHHHHHHHHHhhc
Q 005700 312 YEFVAIFDADF-QPNPDFLRRTVPHFKD 338 (682)
Q Consensus 312 ~d~Vl~lDaD~-~~~pd~L~~lv~~~~~ 338 (682)
.|+++++++|. .++++.+++++..+..
T Consensus 91 ~~~vlv~~~D~P~i~~~~i~~l~~~~~~ 118 (262)
T 1vic_A 91 NEIIVNIQGDEPLIPPVIVRQVADNLAK 118 (262)
T ss_dssp TCEEEECCTTCTTCCHHHHHHHHHHHHH
T ss_pred CCEEEEEeCCcCccCHHHHHHHHHHHHh
Confidence 78999999999 5789999999988764
No 37
>3q80_A 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; TB structural genomics consortium, TBSGC, rossman fold; HET: CDM; 2.00A {Mycobacterium tuberculosis} SCOP: c.68.1.0 PDB: 3q7u_A* 3okr_A 2xwn_A*
Probab=66.73 E-value=26 Score=34.10 Aligned_cols=92 Identities=17% Similarity=0.226 Sum_probs=54.5
Q ss_pred CchHHHHHHHHHHHcCCCCCCceEEEEEcCCCC-hhHHHHHHHHHHHHhhcCCeEEEEeccCCCCcchhhHHHHHhhccc
Q 005700 231 NEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDD-PTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYV 309 (682)
Q Consensus 231 NE~~~l~~tL~Sl~~qdYP~~~l~ViVvDD~sd-d~t~~~l~~~~~~~~~~~v~v~~~~r~~~~g~KagaLn~gl~~~~~ 309 (682)
+....+..+++.+.+.... ++ |+|+-+..+ +.. ++... . ++.++ . ...+ ...++..|++....
T Consensus 33 ~Gkpll~~~l~~~~~~~~~-~~--ivVv~~~~~~~~~----~~~~~---~-~v~~v--~--gg~~-r~~sv~~gl~~~~~ 96 (231)
T 3q80_A 33 DGQTLIERAVDGLLDSGVV-DT--VVVAVPADRTDEA----RQILG---H-RAMIV--A--GGSN-RTDTVNLALTVLSG 96 (231)
T ss_dssp TTEEHHHHHHHHHHHTSCC-CE--EEEEECGGGHHHH----HHHHG---G-GCEEE--E--CCSS-HHHHHHHHHGGGC-
T ss_pred CCeEHHHHHHHHHHhCCCC-Ce--EEEECChHHHHHH----HHHhc---C-CeEEE--c--CCCc-hHHHHHHHHHHhhh
Confidence 3456889999998765322 24 334433222 222 22211 2 34333 1 1112 45677788875311
Q ss_pred -CCccEEEEEcCCC-CCCHHHHHHHHHHhhc
Q 005700 310 -KDYEFVAIFDADF-QPNPDFLRRTVPHFKD 338 (682)
Q Consensus 310 -a~~d~Vl~lDaD~-~~~pd~L~~lv~~~~~ 338 (682)
.+.|+|++.|+|. .++++.+++++..+.+
T Consensus 97 ~~~~d~Vlv~~~d~Pli~~~~i~~li~~~~~ 127 (231)
T 3q80_A 97 TAEPEFVLVHDAARALTPPALVARVVEALRD 127 (231)
T ss_dssp --CCSEEEECCTTCTTCCHHHHHHHHHHHHT
T ss_pred cCCCCEEEEEcCCcCCCCHHHHHHHHHHHhh
Confidence 1268999999998 7799999999999875
No 38
>1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A
Probab=65.60 E-value=28 Score=33.16 Aligned_cols=92 Identities=13% Similarity=0.110 Sum_probs=55.3
Q ss_pred chHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCCeEEEEeccC----CCCcchhhHHHHHhhc
Q 005700 232 EKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRIL----RDGYKAGNLKSAMNCS 307 (682)
Q Consensus 232 E~~~l~~tL~Sl~~qdYP~~~l~ViVvDD~sdd~t~~~l~~~~~~~~~~~v~v~~~~r~~----~~g~KagaLn~gl~~~ 307 (682)
....+..+++.+.+...- ++ |+|+-+ ++...+.+ + ..+++++ . ++. ...+...++..|++..
T Consensus 28 gkpll~~~l~~~~~~~~~-~~--ivvv~~--~~~i~~~~----~---~~~~~~~-~-~~~~~~~~~~g~~~sv~~~l~~~ 93 (228)
T 1ezi_A 28 GISLLGHTINAAISSKCF-DR--IIVSTD--GGLIAEEA----K---NFGVEVV-L-RPAELASDTASSISGVIHALETI 93 (228)
T ss_dssp TEEHHHHHHHHHHHHCCC-SE--EEEEES--CHHHHHHH----H---HTTCEEE-E-CCC------CHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHhCCCC-CE--EEEECC--CHHHHHHH----H---HcCCEEE-e-CchHHcCCCCChHHHHHHHHHHh
Confidence 346788888888775422 24 444443 23332222 2 3466653 2 221 1123466777787753
Q ss_pred ccCCccEEEEEcCCC-CCCHHHHHHHHHHhhc
Q 005700 308 YVKDYEFVAIFDADF-QPNPDFLRRTVPHFKD 338 (682)
Q Consensus 308 ~~a~~d~Vl~lDaD~-~~~pd~L~~lv~~~~~ 338 (682)
..+.|.++++++|. .++++.+++++..+.+
T Consensus 94 -~~~~d~vlv~~~D~P~~~~~~i~~l~~~~~~ 124 (228)
T 1ezi_A 94 -GSNSGTVTLLQPTSPLRTGAHIREAFSLFDE 124 (228)
T ss_dssp -TCCSEEEEECCTTCTTCCHHHHHHHHTTCCT
T ss_pred -CCCCCEEEEEcCCCCcCCHHHHHHHHHHHHh
Confidence 22468999999999 5789999999987754
No 39
>3ngw_A Molybdopterin-guanine dinucleotide biosynthesis P (MOBA); alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.31A {Archaeoglobus fulgidus}
Probab=64.97 E-value=24 Score=33.66 Aligned_cols=86 Identities=9% Similarity=0.091 Sum_probs=55.1
Q ss_pred CchHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCCeEEEEeccCCCCcchhhHHHHHhhcccC
Q 005700 231 NEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVK 310 (682)
Q Consensus 231 NE~~~l~~tL~Sl~~qdYP~~~l~ViVvDD~sdd~t~~~l~~~~~~~~~~~v~v~~~~r~~~~g~KagaLn~gl~~~~~a 310 (682)
+....++.+++.+.+. +|+|+-+. ++.. +... ...+++++. ......+...++..|++. .
T Consensus 24 ~G~pli~~~~~~l~~~-------~vvvv~~~-~~~~----~~~~---~~~~~~~v~--d~~~~~G~~~si~~gl~~---~ 83 (208)
T 3ngw_A 24 CGKKLIEWVLEKYSPF-------QTVFVCRD-EKQA----EKLS---SRYEAEFIW--DLHKGVGSIAGIHAALRH---F 83 (208)
T ss_dssp TTEEHHHHHHHHHTTS-------EEEEECSS-HHHH----HHHH---TTSCSCEEC--CTTCCCSHHHHHHHHHHH---H
T ss_pred CCeeHHHHHHHHhcCC-------CEEEEECC-HHHH----HHHH---HhcCCeEEe--cCCCCCChHHHHHHHHHH---c
Confidence 5557888999888764 35555532 2222 2111 124666553 222222366788888885 3
Q ss_pred CccEEEEEcCCC-CCCHHHHHHHHHHhhc
Q 005700 311 DYEFVAIFDADF-QPNPDFLRRTVPHFKD 338 (682)
Q Consensus 311 ~~d~Vl~lDaD~-~~~pd~L~~lv~~~~~ 338 (682)
.|++ ++++|. .++++.+++++..+..
T Consensus 84 -~~~v-v~~~D~P~i~~~~i~~l~~~~~~ 110 (208)
T 3ngw_A 84 -GSCV-VAAIDMPFVKPEVLEHLYKEGEK 110 (208)
T ss_dssp -SSEE-EEETTCTTCCHHHHHHHHHHHHH
T ss_pred -CCCE-EEECCccCCCHHHHHHHHHHhhc
Confidence 7899 999999 6799999999998863
No 40
>2qh5_A PMI, ALGA, mannose-6-phosphate isomerase; structural genomics, PSI, protein structure initi nysgrc; 2.30A {Helicobacter pylori}
Probab=63.38 E-value=38 Score=34.18 Aligned_cols=95 Identities=9% Similarity=0.133 Sum_probs=56.5
Q ss_pred eecCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhh-cCC-eEEEEeccCCCCcchhhHHHHH
Q 005700 227 IPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQE-AGA-NIVYRHRILRDGYKAGNLKSAM 304 (682)
Q Consensus 227 IP~yNE~~~l~~tL~Sl~~qdYP~~~l~ViVvDD~sdd~t~~~l~~~~~~~~~-~~v-~v~~~~r~~~~g~KagaLn~gl 304 (682)
+|..+....+..+++.+.+. . .++ ++++++...+. +++... . .+. ++.+...+...| -++++..+.
T Consensus 31 l~i~gg~pli~~~l~~l~~~-~--~~i-~vv~~~~~~~~----i~~~~~---~~~~~~~~~~i~~~~~~g-t~~al~~a~ 98 (308)
T 2qh5_A 31 LKLFDHKSLFELSFKRNASL-V--DET-LIVCNEKHYFL----ALEEIK---NEIKNKSVGFLLESLSKN-TANAIALSA 98 (308)
T ss_dssp CTTBTTBCHHHHHHHHHHTT-C--SEE-EEEEEGGGHHH----HHHHTT---TTCSSCEEEEEEESSCCC-HHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHcc-C--CCE-EEEEChhHHHH----HHHHHH---HhhCCCccEEEeCCCCCC-hHHHHHHHH
Confidence 45544556888899988876 2 243 33444321122 222221 2 344 554443333344 778888777
Q ss_pred hhcccCCccEEEEEcCCCCC-CHHHHHHHHHH
Q 005700 305 NCSYVKDYEFVAIFDADFQP-NPDFLRRTVPH 335 (682)
Q Consensus 305 ~~~~~a~~d~Vl~lDaD~~~-~pd~L~~lv~~ 335 (682)
.. ....++++++.+|... +++.+.+++..
T Consensus 99 ~~--l~~~~~~lv~~~D~~~~~~~~~~~~~~~ 128 (308)
T 2qh5_A 99 LM--SDKEDLLIVTPSDHLIKDLQAYENAIKK 128 (308)
T ss_dssp HT--SCTTSEEEEEESSCBCCCHHHHHHHHHH
T ss_pred HH--hCCCCeEEEEcCCccccCHHHHHHHHHH
Confidence 64 2335689999999977 78888888875
No 41
>3juk_A UDP-glucose pyrophosphorylase (GALU); transfer; HET: UPG; 2.30A {Helicobacter pylori} PDB: 3juj_A*
Probab=63.06 E-value=6.8 Score=39.16 Aligned_cols=102 Identities=9% Similarity=0.132 Sum_probs=60.6
Q ss_pred eecCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHH------------------HHHHHhhcCCeEEEEe
Q 005700 227 IPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKE------------------EVLKWQEAGANIVYRH 288 (682)
Q Consensus 227 IP~yNE~~~l~~tL~Sl~~qdYP~~~l~ViVvDD~sdd~t~~~l~~------------------~~~~~~~~~v~v~~~~ 288 (682)
+|.-+. ..+..+++++.+... ++ |+|+-....+...+.+.. ..+.. ..+.++.+..
T Consensus 28 l~i~gk-pli~~~l~~l~~~gi--~~--i~vv~~~~~~~i~~~~~~~~~l~~~l~~~~~~~~~~~~~~~-~~~~~i~~~~ 101 (281)
T 3juk_A 28 LPIVDK-PLIQYAVEEAMEAGC--EV--MAIVTGRNKRSLEDYFDTSYEIEHQIQGTNKENALKSIRNI-IEKCCFSYVR 101 (281)
T ss_dssp CBSSSS-BHHHHHHHHHHHHTC--CE--EEEEECTTHHHHHHHTSCCC--------CCHHHHHHHHHHH-HHHCEEEEEE
T ss_pred ceECCE-EHHHHHHHHHHhCCC--CE--EEEEecCCHHHHHHHHhcchhhhhhhhcccchhhhhhhhcc-ccCccEEEEe
Confidence 455555 688888888887642 24 344433222333222110 00000 0246676665
Q ss_pred ccCCCCcchhhHHHHHhhcccCCccEEEEEcCCCCCCHH----HHHHHHHHhhc
Q 005700 289 RILRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPD----FLRRTVPHFKD 338 (682)
Q Consensus 289 r~~~~g~KagaLn~gl~~~~~a~~d~Vl~lDaD~~~~pd----~L~~lv~~~~~ 338 (682)
.....| -++++..++... +.|.++++.+|+..+++ .+++++..+.+
T Consensus 102 ~~~~~G-t~~al~~a~~~l---~~~~~lv~~~D~~~~~~~~~~~l~~l~~~~~~ 151 (281)
T 3juk_A 102 QKQMKG-LGHAILTGEALI---GNEPFAVILADDLCISHDHPSVLKQMTSLYQK 151 (281)
T ss_dssp CSSCCC-HHHHHHHTHHHH---CSSCEEEECTTEEEECTTSCCHHHHHHHHHHH
T ss_pred cCCCCC-cHHHHHHHHHHc---CCCCEEEEeCCeeccCccchHHHHHHHHHHHH
Confidence 444445 778888877742 34778899999988888 89999988765
No 42
>1vgw_A 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; structural genomics, transferase; 2.35A {Neisseria gonorrhoeae} SCOP: c.68.1.13 PDB: 1vgz_A
Probab=61.30 E-value=63 Score=30.54 Aligned_cols=96 Identities=11% Similarity=0.091 Sum_probs=57.0
Q ss_pred CchHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCCeEEEEeccCCCCcchhhHHHHHhhccc-
Q 005700 231 NEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYV- 309 (682)
Q Consensus 231 NE~~~l~~tL~Sl~~qdYP~~~l~ViVvDD~sdd~t~~~l~~~~~~~~~~~v~v~~~~r~~~~g~KagaLn~gl~~~~~- 309 (682)
+....+..+++.+.+.... ++ |+|+-+...+...+ +. +... ..+.+. ....| ..+++..|++....
T Consensus 32 ~gkpli~~~l~~l~~~~~~-~~--ivvv~~~~~~~~~~-~~----~~~~--~~i~~~--~~~~~-~~~si~~~l~~~~~~ 98 (231)
T 1vgw_A 32 GSKTVLEHVLGIFERHEAV-DL--TVVVVSPEDTFADK-VQ----TAFP--QVRVWK--NGGQT-RAETVRNGVAKLLET 98 (231)
T ss_dssp TTEEHHHHHHHHHHTCTTC-CE--EEEECCTTCSTHHH-HH----HHCT--TSEEEC--CCCSS-HHHHHHHHHHHHHHH
T ss_pred CCeEHHHHHHHHHHcCCCC-Ce--EEEEECccHHHHHH-HH----hcCC--CceEEE--cCCCc-HHHHHHHHHHHHhhh
Confidence 3456888999988765422 24 44444333333333 22 1111 233332 22233 67777777764211
Q ss_pred ---CCccEEEEEcCCC-CCCHHHHHHHHHHhhcC
Q 005700 310 ---KDYEFVAIFDADF-QPNPDFLRRTVPHFKDN 339 (682)
Q Consensus 310 ---a~~d~Vl~lDaD~-~~~pd~L~~lv~~~~~~ 339 (682)
.+.|.++++++|. .++++.+++++..+..+
T Consensus 99 ~~~~~~~~vlv~~~D~p~~~~~~i~~l~~~~~~~ 132 (231)
T 1vgw_A 99 GLAAETDNILVHDAARCCLPSEALARLIEQAGNA 132 (231)
T ss_dssp SSSCTTSEEEECCTTCTTCCHHHHHHHHHHHTTC
T ss_pred ccCCCCCEEEEEcCCcccCCHHHHHHHHHHHhhc
Confidence 1568999999998 67899999999988654
No 43
>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A*
Probab=60.50 E-value=5.8 Score=40.12 Aligned_cols=108 Identities=13% Similarity=0.091 Sum_probs=62.8
Q ss_pred CCccEEEEEcCCCCCCHHHHHHHHHHhhcCCCeeEEEeeeEeecCCCChHHHhhhhhhhhhhHHHHhhcccccccccccc
Q 005700 310 KDYEFVAIFDADFQPNPDFLRRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQDINLSFHFEVEQQVNGVFINFFGFNG 389 (682)
Q Consensus 310 a~~d~Vl~lDaD~~~~pd~L~~lv~~~~~~p~vg~Vqg~~~~~n~~~~l~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 389 (682)
.+.++++++|+|+.+..+-|.+++..+ +|+-...-|.......... .++. .... .......++..|
T Consensus 92 ~~~~Wf~~~DDDtyv~~~nL~~~L~~~--d~~~~~YiG~~~~~~~~~~-------~~~~----~~~~-~~~~~~~y~~GG 157 (280)
T 2j0a_A 92 SGLRWFCHVDDDNYVNPKALLQLLKTF--PQDRDVYVGKPSLNRPIHA-------SELQ----SKQR-TKLVRFWFATGG 157 (280)
T ss_dssp HTCSEEEEEETTEEECHHHHHHHHTTS--CTTSCCEEECEEC-------------------------------CCEECGG
T ss_pred CCCcEEEEeCCCcEEcHHHHHHHHHhC--CCCCCEEEEEeccCccccc-------cccC----cccc-ccccccCcccCC
Confidence 689999999999999998888888766 3443333333221110000 0000 0000 000011233568
Q ss_pred ceEEEEeeeehhcCCCC----------CCCchhHHHHHHHHH-HcCCeEEEec
Q 005700 390 TAGVWRIKALEDSGGWM----------ERTTVEDMDIAVRAH-LRGWKFIFLN 431 (682)
Q Consensus 390 ~~~~~Rr~al~~iGG~~----------~~~~~ED~~l~~rl~-~~G~ki~y~~ 431 (682)
++.++.+++++++..+. .....||..++.-+. +.|-+....+
T Consensus 158 aG~vlSr~~l~~l~~~~~~~~~~~~~~~~~~~dD~~lG~Cl~~~lGV~~~~~~ 210 (280)
T 2j0a_A 158 AGFCINRQLALKMVPWASGSHFVDTSALIRLPDDCTVGYIIECKLGGRLQPSP 210 (280)
T ss_dssp GCEEEEHHHHHHHHHHHTTCTTSCCTTTTTSCHHHHHHHHHHHTTCCCEEECT
T ss_pred CEEEECHHHHHHHHHhhcccccccccccCCCCccHHHHHHHHhcCCCCceecc
Confidence 89999999988864221 112358999999998 7898877654
No 44
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=59.98 E-value=44 Score=35.59 Aligned_cols=90 Identities=17% Similarity=0.180 Sum_probs=55.6
Q ss_pred hHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCCeEEEEeccCCCCcchhhHHHHHhhcccCCc
Q 005700 233 KEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKDY 312 (682)
Q Consensus 233 ~~~l~~tL~Sl~~qdYP~~~l~ViVvDD~sdd~t~~~l~~~~~~~~~~~v~v~~~~r~~~~g~KagaLn~gl~~~~~a~~ 312 (682)
...++.+++.+.+.. -++ |+|+-+..++...+.++ ..++.++ ..+...| -++++..+++. ..+.
T Consensus 36 ~pli~~~l~~l~~~~--~~~--i~vv~~~~~~~i~~~~~-------~~~~~~v--~~~~~~g-~~~~i~~~~~~--~~~~ 99 (459)
T 4fce_A 36 KPMVQHVIDAAMKLG--AQH--VHLVYGHGGELLKKTLA-------DPSLNWV--LQAEQLG-TGHAMQQAAPH--FADD 99 (459)
T ss_dssp EEHHHHHHHHHHHHT--CSC--EEEEESSCHHHHHHHC------------CEE--ECSSCCC-HHHHHHHHGGG--SCTT
T ss_pred eeHHHHHHHHHHhCC--CCc--EEEEeCCCHHHHHHHhc-------cCCcEEE--eCCCCCC-cHHHHHHHHHh--cCCC
Confidence 468888998888764 224 33343322333332221 2344443 3333334 67888888885 2346
Q ss_pred cEEEEEcCCC-CCCHHHHHHHHHHhhc
Q 005700 313 EFVAIFDADF-QPNPDFLRRTVPHFKD 338 (682)
Q Consensus 313 d~Vl~lDaD~-~~~pd~L~~lv~~~~~ 338 (682)
|.++++++|. .+.++.+++++..+.+
T Consensus 100 ~~~lv~~~D~P~i~~~~i~~l~~~~~~ 126 (459)
T 4fce_A 100 EDILMLYGDVPLISVDTLQRLLAAKPE 126 (459)
T ss_dssp SEEEEEETTCTTCCHHHHHHHHHHCCT
T ss_pred CcEEEEeCCcccCCHHHHHHHHHHHhh
Confidence 8999999999 6899999999998864
No 45
>1e5k_A Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin nucleotidyl-transferase,; HET: CIT; 1.35A {Escherichia coli} SCOP: c.68.1.8 PDB: 1h4e_A* 1hjl_A* 1hjj_A* 1h4c_A* 1h4d_A* 1fr9_A 1frw_A*
Probab=58.57 E-value=25 Score=33.07 Aligned_cols=84 Identities=15% Similarity=0.158 Sum_probs=51.6
Q ss_pred chHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCCeEEEEeccCCCCcchhhHHHHHhhcccCC
Q 005700 232 EKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKD 311 (682)
Q Consensus 232 E~~~l~~tL~Sl~~qdYP~~~l~ViVvDD~sdd~t~~~l~~~~~~~~~~~v~v~~~~r~~~~g~KagaLn~gl~~~~~a~ 311 (682)
....+..+++.+... .++ |+|+-+...+ + ++ ..+++++... .....+-.+++..|++. .+
T Consensus 32 G~pli~~~l~~l~~~---~~~--ivvv~~~~~~---~-~~-------~~~~~~v~~~-~~~~~G~~~si~~~l~~---~~ 91 (201)
T 1e5k_A 32 GKPLWQHVADALMTQ---LSH--VVVNANRHQE---I-YQ-------ASGLKVIEDS-LADYPGPLAGMLSVMQQ---EA 91 (201)
T ss_dssp TEEHHHHHHHHHHHH---CSC--EEEECSSSHH---H-HH-------TTSCCEECCC-TTCCCSHHHHHHHHHHH---CC
T ss_pred ceeHHHHHHHHHHhh---CCE--EEEEcCCcHH---H-Hh-------hcCCeEEecC-CCCCCCHHHHHHHHHHh---CC
Confidence 346778888877643 124 4444432211 1 11 3456554221 12212367788888884 45
Q ss_pred ccEEEEEcCCC-CCCHHHHHHHHHH
Q 005700 312 YEFVAIFDADF-QPNPDFLRRTVPH 335 (682)
Q Consensus 312 ~d~Vl~lDaD~-~~~pd~L~~lv~~ 335 (682)
.|+++++++|. .++++.+++++..
T Consensus 92 ~~~vlv~~~D~P~i~~~~i~~l~~~ 116 (201)
T 1e5k_A 92 GEWFLFCPCDTPYIPPDLAARLNHQ 116 (201)
T ss_dssp SSEEEEEETTCTTCCTTHHHHHHHT
T ss_pred CCcEEEEeCCcCcCCHHHHHHHHhh
Confidence 79999999999 6799999999876
No 46
>2vsh_A TARI, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; nucleotidyltransferase; HET: 1PE PG4 P6G; 2.00A {Streptococcus pneumoniae} PDB: 2vsi_A*
Probab=57.35 E-value=28 Score=33.14 Aligned_cols=98 Identities=13% Similarity=0.081 Sum_probs=55.1
Q ss_pred chHHHHHHHHHHHcCCCCCCceEEEEEcCCCC-hhHHHHHHHHHHHHhh-cCCeEEEEeccCCCCcchhhHHHHHhhccc
Q 005700 232 EKEVYQQSIAAVCNLDWPKSKILIQVLDDSDD-PTAQTLIKEEVLKWQE-AGANIVYRHRILRDGYKAGNLKSAMNCSYV 309 (682)
Q Consensus 232 E~~~l~~tL~Sl~~qdYP~~~l~ViVvDD~sd-d~t~~~l~~~~~~~~~-~~v~v~~~~r~~~~g~KagaLn~gl~~~~~ 309 (682)
....+..+++.+.+.... ++ |+|+-+... +...+. ..++.- ........ ....| ...++..|++....
T Consensus 30 g~pli~~~l~~l~~~~~~-~~--i~vv~~~~~~~~~~~~----~~~~~~~~~~~~~~~--~~~~~-~~~~i~~~l~~~~~ 99 (236)
T 2vsh_A 30 DRPILIHTIEKFVLEPSI-EK--IVVGVHGDWVSHAEDL----VDKYLPLYKERIIIT--KGGAD-RNTSIKNIIEAIDA 99 (236)
T ss_dssp TEEHHHHHHHHHHTCTTC-CC--EEEEECGGGHHHHHHH----HHHHCGGGGGGEEEE--ECCSS-HHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHcCCCC-Ce--EEEEeCHHHHHHHHHH----HHhccccccCceEEE--CCCCc-hHHHHHHHHHHHHh
Confidence 447888899988875322 24 334433322 323333 222210 00112221 11123 56667777764211
Q ss_pred --C--CccEEEEEcCCC-CCCHHHHHHHHHHhhcC
Q 005700 310 --K--DYEFVAIFDADF-QPNPDFLRRTVPHFKDN 339 (682)
Q Consensus 310 --a--~~d~Vl~lDaD~-~~~pd~L~~lv~~~~~~ 339 (682)
. +.|+++++++|. .++++.+++++..+..+
T Consensus 100 ~~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~ 134 (236)
T 2vsh_A 100 YRPLTPEDIVVTHDSVRPFITLRMIQDNIQLAQNH 134 (236)
T ss_dssp HSCCCTTCEEEEEETTCTTCCHHHHHHHHHHHHHS
T ss_pred hccCCCCCEEEEecCCcccCCHHHHHHHHHHHHhc
Confidence 2 458999999999 78999999999988653
No 47
>3pnn_A Conserved domain protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE GOL; 1.90A {Porphyromonas gingivalis}
Probab=53.38 E-value=67 Score=32.29 Aligned_cols=100 Identities=8% Similarity=-0.020 Sum_probs=57.1
Q ss_pred EeecC-CchHHHHHHHHHHHcCCCCCCceEEEEEcCCC-ChhHHHHHHHHHHHHhhcCCeEEEEecc-------------
Q 005700 226 QIPMC-NEKEVYQQSIAAVCNLDWPKSKILIQVLDDSD-DPTAQTLIKEEVLKWQEAGANIVYRHRI------------- 290 (682)
Q Consensus 226 vIP~y-NE~~~l~~tL~Sl~~qdYP~~~l~ViVvDD~s-dd~t~~~l~~~~~~~~~~~v~v~~~~r~------------- 290 (682)
++|.- +....+..+++.+.+... .+ |+|+-+.. .+...+.+. .....+.++.+....
T Consensus 25 l~~ig~~g~pli~~~l~~~~~~~~--~~--i~vv~~~~~~~~~~~~~~----~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 96 (303)
T 3pnn_A 25 LDGIGPGGDTIMDYSVYDAIRAGF--GR--LVFVIRHSFEKEFREKIL----TKYEGRIPVELVFQELDRLPEGFSCPEG 96 (303)
T ss_dssp CCCCSTTSCCHHHHHHHHHHHHTC--CE--EEEEECGGGHHHHHHHTH----HHHTTTSCEEEEECCTTCCCTTCCCCTT
T ss_pred EeEcCCCCeeHHHHHHHHHHHCCC--Ce--EEEEcCchHHHHHHHHHH----HHhccCCcEEEEeccccccccccccccc
Confidence 35553 344688888888877542 24 33444322 233333332 111234555555433
Q ss_pred --CCCCcchhhHHHHHhhcccCCccEEEEEcCCCCCCHHHHHHHHHHhhc
Q 005700 291 --LRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPNPDFLRRTVPHFKD 338 (682)
Q Consensus 291 --~~~g~KagaLn~gl~~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~~~~ 338 (682)
...| -++++..+... -+ +-++++.+|+..+++.+++++....+
T Consensus 97 ~~~~~G-t~~al~~a~~~---i~-~~~lV~~gD~l~~~~~~~~l~~~~~~ 141 (303)
T 3pnn_A 97 REKPWG-TNHAVLMGRDA---IR-EPFAVINADDFYGRNGFEVLARKLMT 141 (303)
T ss_dssp CCSCCC-HHHHHHTTTTT---CC-SCEEEEESSCBCCHHHHHHHHHHHHT
T ss_pred ccccCC-cHHHHHHHHHh---cC-CCEEEEECCeecCHHHHHHHHHHHHH
Confidence 2233 66676666653 23 44566789999999999999998763
No 48
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*
Probab=52.96 E-value=72 Score=33.79 Aligned_cols=90 Identities=16% Similarity=0.167 Sum_probs=55.3
Q ss_pred hHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCCeEEEEeccCCCCcchhhHHHHHhhcccCCc
Q 005700 233 KEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKDY 312 (682)
Q Consensus 233 ~~~l~~tL~Sl~~qdYP~~~l~ViVvDD~sdd~t~~~l~~~~~~~~~~~v~v~~~~r~~~~g~KagaLn~gl~~~~~a~~ 312 (682)
...+..+++++.+... +++ ++++++ ..+.. ++.. .+.+++++ ......| -++++..+++. ..+.
T Consensus 33 kpli~~~l~~l~~~~~--~~i-ivv~~~-~~~~i----~~~~---~~~~~~~v--~~~~~~g-~~~~~~~~~~~--~~~~ 96 (456)
T 2v0h_A 33 KPMVKHVIDTAHQLGS--ENI-HLIYGH-GGDLM----RTHL---ANEQVNWV--LQTEQLG-TAHAVQQAAPF--FKDN 96 (456)
T ss_dssp EEHHHHHHHHHHHTTC--SCE-EEEECT-THHHH----HHHT---TTCCCEEE--ECSCCCC-HHHHHHHHGGG--CCTT
T ss_pred ccHHHHHHHHHHhCCC--CcE-EEEeCC-CHHHH----HHHh---hcCCcEEE--eCCCCCC-cHHHHHHHHHh--cCCC
Confidence 3688889998887642 243 334433 22222 2211 12244443 2233334 66788888874 2347
Q ss_pred cEEEEEcCCC-CCCHHHHHHHHHHhhc
Q 005700 313 EFVAIFDADF-QPNPDFLRRTVPHFKD 338 (682)
Q Consensus 313 d~Vl~lDaD~-~~~pd~L~~lv~~~~~ 338 (682)
|.++++++|. .+++..+++++..+.+
T Consensus 97 ~~vlv~~~D~P~i~~~~i~~l~~~~~~ 123 (456)
T 2v0h_A 97 ENIVVLYGDAPLITKETLEKLIEAKPE 123 (456)
T ss_dssp SEEEEEETTCTTCCHHHHHHHHHHCCT
T ss_pred CeEEEEcCCcceeCHHHHHHHHHHHhc
Confidence 8999999999 5789999999988764
No 49
>3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus}
Probab=52.95 E-value=15 Score=34.56 Aligned_cols=39 Identities=21% Similarity=0.280 Sum_probs=31.4
Q ss_pred chhhHHHHHhhcccCCccEEEEEcCCC-CCCHHHHHHHHHHh
Q 005700 296 KAGNLKSAMNCSYVKDYEFVAIFDADF-QPNPDFLRRTVPHF 336 (682)
Q Consensus 296 KagaLn~gl~~~~~a~~d~Vl~lDaD~-~~~pd~L~~lv~~~ 336 (682)
-.+++..|++.. .+.|.++++++|. .++++.+++++..+
T Consensus 73 ~~~si~~al~~~--~~~~~vlv~~~D~P~i~~~~i~~l~~~~ 112 (197)
T 3d5n_A 73 ISTSLKLGLRFF--KDYDAVLVALGDMPFVTKEDVNKIINTF 112 (197)
T ss_dssp HHHHHHHHHHHT--TTSSEEEEEETTCCCSCHHHHHHHHHTC
T ss_pred HHHHHHHHHHhh--ccCCcEEEEeCCccccCHHHHHHHHHHh
Confidence 567778888742 2348999999999 67999999999877
No 50
>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} SCOP: c.68.1.0
Probab=52.01 E-value=63 Score=32.15 Aligned_cols=100 Identities=5% Similarity=-0.047 Sum_probs=57.0
Q ss_pred eEEEEeecCCch--HHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCCeEEEEeccCC--CCc--
Q 005700 222 MVLVQIPMCNEK--EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILR--DGY-- 295 (682)
Q Consensus 222 ~VsVvIP~yNE~--~~l~~tL~Sl~~qdYP~~~l~ViVvDD~sdd~t~~~l~~~~~~~~~~~v~v~~~~r~~~--~g~-- 295 (682)
.+.|++.+ |+. ..+.-++.|++..+ +...+.+.|++|+-+++..+.+++..+ ..+.++....-... .+.
T Consensus 5 ~i~I~~~~-d~~Y~~~~~v~i~Sl~~~~-~~~~~~~~il~~~is~~~~~~L~~~~~---~~~~~i~~~~~~~~~~~~~~~ 79 (276)
T 3tzt_A 5 ADALLLTL-DENYIPQMKVLMTSIYINN-PGRIFDVYLIHSRISEDKLKDLGEDLK---KFSYTLYPIRATDDLFSFAKV 79 (276)
T ss_dssp CEEEEEEC-CGGGHHHHHHHHHHHHHHS-TTCCEEEEEEESCCCHHHHHHHHHHHH---TTTCEEEEEECC---------
T ss_pred eEEEEEEe-CHhHHHHHHHHHHHHHHhC-CCCceEEEEEeCCCCHHHHHHHHHHHH---HcCCEEEEEEeCHHHHhcCcc
Confidence 36666544 554 77888899998754 234677888888877777776666544 34566655432221 010
Q ss_pred -chhhHHHHHhh----cccCCccEEEEEcCCCCCCH
Q 005700 296 -KAGNLKSAMNC----SYVKDYEFVAIFDADFQPNP 326 (682)
Q Consensus 296 -KagaLn~gl~~----~~~a~~d~Vl~lDaD~~~~p 326 (682)
+.-....-.+. ....+.|-|+.+|+|+++-.
T Consensus 80 ~~~~s~~~~~rl~~~~l~p~~~~kvlylD~D~iv~~ 115 (276)
T 3tzt_A 80 TDRYPKEMYYRLLAGEFLPENLGEILYLDPDMLVIN 115 (276)
T ss_dssp ----CHHHHHHHTHHHHSCTTCCEEEEECSSEEECS
T ss_pred ccccCHHHHHHHHHHHHcccccCeEEEEeCCeeecC
Confidence 00011111111 11236899999999997754
No 51
>3rsb_A Adenosylcobinamide-phosphate guanylyltransferase; pyrophosphorylase binding motif, pyrophosphorylase; HET: GTP; 2.80A {Methanocaldococcus jannaschii}
Probab=50.96 E-value=29 Score=32.10 Aligned_cols=93 Identities=13% Similarity=0.190 Sum_probs=54.9
Q ss_pred chHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCCeEEEEeccCCCCcchhhHHHHHhhcccCC
Q 005700 232 EKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKD 311 (682)
Q Consensus 232 E~~~l~~tL~Sl~~qdYP~~~l~ViVvDD~sdd~t~~~l~~~~~~~~~~~v~v~~~~r~~~~g~KagaLn~gl~~~~~a~ 311 (682)
....+..+++.+.+.. -++ |+|+-+..++.+.+.+++. + ....++.... ....| ..+++..|++. .
T Consensus 26 g~pli~~~l~~l~~~~--~~~--v~vv~~~~~~~i~~~~~~~---~-~~~~~~~~~~-~~~~g-~~~si~~al~~---~- 91 (196)
T 3rsb_A 26 GRCLIDYVVSPLLKSK--VNN--IFIATSPNTPKTKEYINSA---Y-KDYKNIVVID-TSGKG-YIEDLNECIGY---F- 91 (196)
T ss_dssp TEEHHHHHHHHHHSSS--CCC--EEEECCTTCHHHHHHHHHH---T-TTTTEEEE----------CCCCCTTTTT---C-
T ss_pred CEEHHHHHHHHHHHCC--CCE--EEEEeCCChHHHHHHHHhh---c-cCCCCEEEEE-CCCCC-cHHHHHHHHHh---C-
Confidence 3468899999998765 224 4455444455554444321 1 1111333332 22223 55566667663 2
Q ss_pred ccEEEEEcCCC-CCCHHHHHHHHHHhhc
Q 005700 312 YEFVAIFDADF-QPNPDFLRRTVPHFKD 338 (682)
Q Consensus 312 ~d~Vl~lDaD~-~~~pd~L~~lv~~~~~ 338 (682)
.|.++++++|. .++++.+++++..+.+
T Consensus 92 ~~~vlv~~~D~P~i~~~~i~~l~~~~~~ 119 (196)
T 3rsb_A 92 SEPFLVVSSDLINLKSKIINSIVDYFYC 119 (196)
T ss_dssp SSCEEEEETTEESCCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHh
Confidence 78999999999 6799999999999874
No 52
>1i52_A 4-diphosphocytidyl-2-C-methylerythritol synthase; cytidylyltransferase, deoxyxylulose-5-phosphate pathway (DXP isoprenoid biosynthesys, MEP; HET: CTP; 1.50A {Escherichia coli} SCOP: c.68.1.13 PDB: 1ini_A* 1inj_A 1vgt_A 1vgu_A 3n9w_A 1h3m_A
Probab=49.55 E-value=51 Score=31.51 Aligned_cols=93 Identities=14% Similarity=0.158 Sum_probs=55.2
Q ss_pred chHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCCeEEEEeccCCCCcchhhHHHHHhhcccCC
Q 005700 232 EKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKD 311 (682)
Q Consensus 232 E~~~l~~tL~Sl~~qdYP~~~l~ViVvDD~sdd~t~~~l~~~~~~~~~~~v~v~~~~r~~~~g~KagaLn~gl~~~~~a~ 311 (682)
....+..+++.+.+.... ++ |+|+-+..++...+ ++ .+.. ..+.+.. ...| ..+++..|++. ..+
T Consensus 34 g~pll~~~i~~l~~~~~~-~~--ivvv~~~~~~~~~~-~~----~~~~--~~v~~~~--~~~g-~~~~i~~al~~--~~~ 98 (236)
T 1i52_A 34 NQTILEHSVHALLAHPRV-KR--VVIAISPGDSRFAQ-LP----LANH--PQITVVD--GGDE-RADSVLAGLKA--AGD 98 (236)
T ss_dssp TEEHHHHHHHHHHTSTTE-EE--EEEEECTTCCSGGG-SG----GGGC--TTEEEEE--CCSS-HHHHHHHHHHT--STT
T ss_pred CEEHHHHHHHHHHhCCCC-Ce--EEEEeCccHHHHHH-HH----hcCC--CCEEEEC--CCCC-HHHHHHHHHHh--cCC
Confidence 446888899988765322 13 44444333333322 21 1111 1333332 1233 66778888874 224
Q ss_pred ccEEEEEcCCC-CCCHHHHHHHHHHhhcC
Q 005700 312 YEFVAIFDADF-QPNPDFLRRTVPHFKDN 339 (682)
Q Consensus 312 ~d~Vl~lDaD~-~~~pd~L~~lv~~~~~~ 339 (682)
.|.++++++|. .++++.+++++..+..+
T Consensus 99 ~~~~lv~~~D~P~~~~~~i~~l~~~~~~~ 127 (236)
T 1i52_A 99 AQWVLVHDAARPCLHQDDLARLLALSETS 127 (236)
T ss_dssp CSEEEECCTTCTTCCHHHHHHHHGGGGTC
T ss_pred CCEEEEEcCccccCCHHHHHHHHHHHHhc
Confidence 78999999998 57999999999887653
No 53
>2yc3_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran chloroplastic; transferase, non-mevalonate-pathway, herbicide, allosteric P; HET: MW5; 1.40A {Arabidopsis thaliana} PDB: 2yc5_A* 1w77_A* 2ycm_A*
Probab=47.16 E-value=56 Score=30.89 Aligned_cols=93 Identities=12% Similarity=0.050 Sum_probs=55.2
Q ss_pred hHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCCeEEEEeccCCCCcchhhHHHHHhhcccCCc
Q 005700 233 KEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKDY 312 (682)
Q Consensus 233 ~~~l~~tL~Sl~~qdYP~~~l~ViVvDD~sdd~t~~~l~~~~~~~~~~~v~v~~~~r~~~~g~KagaLn~gl~~~~~a~~ 312 (682)
...+..+++.+.+...- ++ |+|+-+...+.. .+.... ..+.++.+.. ...| ..+++..|++.. ..+.
T Consensus 32 ~pli~~~l~~l~~~~~~-~~--ivvv~~~~~~~~---~~~~~~---~~~~~v~~~~--~~~~-~~~sv~~al~~~-~~~~ 98 (228)
T 2yc3_A 32 QPIALYSFFTFSRMPEV-KE--IVVVCDPFFRDI---FEEYEE---SIDVDLSFAI--PGKE-RQDSVYSGLQEI-DVNS 98 (228)
T ss_dssp EEHHHHHHHHHHHCTTE-EE--EEEECCGGGHHH---HHTTTT---TSSSEEEEEC--CCSS-HHHHHHHHHTTS-CTTC
T ss_pred EEHHHHHHHHHHcCCCC-Ce--EEEEEChHHHHH---HHHHHH---hCCCcEEEEC--CCCC-HHHHHHHHHHhh-ccCC
Confidence 46788888888765221 13 445544322222 111111 2234554442 1233 667788888743 2246
Q ss_pred cEEEEEcCCC-CCCHHHHHHHHHHhhc
Q 005700 313 EFVAIFDADF-QPNPDFLRRTVPHFKD 338 (682)
Q Consensus 313 d~Vl~lDaD~-~~~pd~L~~lv~~~~~ 338 (682)
++++++|+|. .++++.+++++..+.+
T Consensus 99 ~~vl~~d~d~P~~~~~~i~~l~~~~~~ 125 (228)
T 2yc3_A 99 ELVCIHDSARPLVNTEDVEKVLKDGSA 125 (228)
T ss_dssp SEEEEEETTCTTCCHHHHHHHHHHHHH
T ss_pred CEEEEecCCCccCCHHHHHHHHHHHHh
Confidence 8999999997 6799999999988764
No 54
>2ux8_A Glucose-1-phosphate uridylyltransferase; UGPG, GALU pyrophosphorylase, nucleotidyltransferase; HET: G1P; 2.65A {Sphingomonas elodea}
Probab=46.79 E-value=22 Score=35.69 Aligned_cols=103 Identities=13% Similarity=0.143 Sum_probs=59.4
Q ss_pred eecCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHH---HHHHhh-------------cCCeEEEEecc
Q 005700 227 IPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEE---VLKWQE-------------AGANIVYRHRI 290 (682)
Q Consensus 227 IP~yNE~~~l~~tL~Sl~~qdYP~~~l~ViVvDD~sdd~t~~~l~~~---~~~~~~-------------~~v~v~~~~r~ 290 (682)
+|..+ ...+..+++.+.+... ++ |+|+-+...+...+.+... ..+... .+.++.+...+
T Consensus 40 l~i~g-kpli~~~l~~l~~~g~--~~--i~vv~~~~~~~i~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~i~~~~~~ 114 (297)
T 2ux8_A 40 LPVVD-RPLIQYAVDEAVEAGI--EQ--MIFVTGRGKSALEDHFDIAYELEATMAARGKSLDVLDGTRLKPGNIAYVRQQ 114 (297)
T ss_dssp CEETT-EEHHHHHHHHHHHTTC--CE--EEEEECTTCHHHHHHTSCCHHHHHHHHTTTCCGGGGTTSCCSTTSEEEEECC
T ss_pred eeECC-eEHHHHHHHHHHhCCC--CE--EEEEeCCCHHHHHHHHhhhhhhhhhhhhccchhhhhhhcccCCCceEEEeCC
Confidence 34444 3688888988887642 24 4444443344444332210 000000 24566665433
Q ss_pred CCCCcchhhHHHHHhhcccCCccEEEEEcCCCCCC--HHHHHHHHHHhhc
Q 005700 291 LRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPN--PDFLRRTVPHFKD 338 (682)
Q Consensus 291 ~~~g~KagaLn~gl~~~~~a~~d~Vl~lDaD~~~~--pd~L~~lv~~~~~ 338 (682)
...| -++++..+.... +.|.++++.+|...+ +..+++++....+
T Consensus 115 ~~~G-t~~al~~a~~~~---~~~~~lv~~~D~~~~~~~~~l~~l~~~~~~ 160 (297)
T 2ux8_A 115 EPMG-LGHAVWCARDIV---GDEPFAVLLPDDFMFGQPGCLKQMVDAYNK 160 (297)
T ss_dssp SCCC-HHHHHHTTHHHH---CSSCEEEECTTEEEESSSCHHHHHHHHHHH
T ss_pred CCCC-hHHHHHHHHHHc---CCCcEEEEeCCeecCCChHHHHHHHHHHHh
Confidence 3344 667777666532 357889999999877 6789999988764
No 55
>4ecm_A Glucose-1-phosphate thymidylyltransferase; HET: DAU; 2.30A {Bacillus anthracis} PDB: 3hl3_A*
Probab=46.13 E-value=35 Score=33.65 Aligned_cols=95 Identities=16% Similarity=0.142 Sum_probs=55.5
Q ss_pred chHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCCeEEEEeccCCCCcchhhHHHHHhhcccCC
Q 005700 232 EKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKD 311 (682)
Q Consensus 232 E~~~l~~tL~Sl~~qdYP~~~l~ViVvDD~sdd~t~~~l~~~~~~~~~~~v~v~~~~r~~~~g~KagaLn~gl~~~~~a~ 311 (682)
....+..+++++.+.. -+++ +++++....+...+.+ ......++++.+.......| -++++..+++. .+
T Consensus 54 g~pli~~~l~~l~~~g--~~~i-ivv~~~~~~~~~~~~~----~~~~~~~~~i~~~~~~~~~G-~~~al~~a~~~---~~ 122 (269)
T 4ecm_A 54 RYPMIYHAVYKLKQCD--ITDI-MIITGKEHMGDVVSFL----GSGQEFGVSFTYRVQDKAGG-IAQALGLCEDF---VG 122 (269)
T ss_dssp TEEHHHHHHHHHHHTT--CCEE-EEEECTTTHHHHHHHH----TTSGGGTCEEEEEECSSCCC-HHHHHHTTHHH---HT
T ss_pred CEEHHHHHHHHHHHCC--CCEE-EEECChhhHHHHHHHH----hhccccCceEEEeeCCccCc-HHHHHHHHHHh---cC
Confidence 3457888999988764 2243 3333332223332222 11113456776654433334 67777777663 23
Q ss_pred ccEEEEEcCCCCCCHHHHHHHHHHhhc
Q 005700 312 YEFVAIFDADFQPNPDFLRRTVPHFKD 338 (682)
Q Consensus 312 ~d~Vl~lDaD~~~~pd~L~~lv~~~~~ 338 (682)
.|.++++.+|.... ..+.+++..+.+
T Consensus 123 ~~~~lv~~~D~~~~-~~l~~l~~~~~~ 148 (269)
T 4ecm_A 123 NDRMVVILGDNIFS-DDIRPYVEEFTN 148 (269)
T ss_dssp TSEEEEEETTEEES-SCSHHHHHHHHT
T ss_pred CCcEEEEeCCccCc-cCHHHHHHHHHh
Confidence 68899999999665 567788877764
No 56
>2xwl_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; transferase, MEP pathway; HET: CTP; 1.49A {Mycobacterium smegmatis} PDB: 2xwm_A*
Probab=43.72 E-value=99 Score=28.88 Aligned_cols=89 Identities=16% Similarity=0.178 Sum_probs=53.0
Q ss_pred chHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCCeEEEEeccCCCCcchhhHHHHHhhcccCC
Q 005700 232 EKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKD 311 (682)
Q Consensus 232 E~~~l~~tL~Sl~~qdYP~~~l~ViVvDD~sdd~t~~~l~~~~~~~~~~~v~v~~~~r~~~~g~KagaLn~gl~~~~~a~ 311 (682)
....+..+++.+.+.... ++ |+|+-+.... +.+++.. . +.++.+... ..+ ...++..|++.. .+
T Consensus 29 g~pli~~~l~~l~~~~~~-~~--i~vv~~~~~~---~~~~~~~----~-~~~v~~~~~--~~~-~~~~i~~al~~~--~~ 92 (223)
T 2xwl_A 29 GTPLLEHALSGLRASGVI-DR--IVIAVPPALT---DESKLVF----G-GEDSVIVSG--GVD-RTESVALALEAA--GD 92 (223)
T ss_dssp TEEHHHHHHHHHHHHSCC-SE--EEEEECGGGH---HHHHHHT----C-BTTEEEEEC--CSS-HHHHHHHHHTTC--TT
T ss_pred CeEHHHHHHHHHhcCCCC-Ce--EEEEEcccHH---HHHHHHh----c-cCCeEEEcC--CCC-HHHHHHHHHHhc--CC
Confidence 346788888888765422 24 3444332221 1122211 1 233433322 223 567788888742 26
Q ss_pred ccEEEEEcCCC-CCCHHHHHHHHHHh
Q 005700 312 YEFVAIFDADF-QPNPDFLRRTVPHF 336 (682)
Q Consensus 312 ~d~Vl~lDaD~-~~~pd~L~~lv~~~ 336 (682)
.|+++++++|. .++++.+++++..+
T Consensus 93 ~~~vlv~~~D~P~~~~~~i~~l~~~~ 118 (223)
T 2xwl_A 93 AEFVLVHDAARALTPPALIARVVAAL 118 (223)
T ss_dssp CSEEEECCTTCTTCCHHHHHHHHHHH
T ss_pred CCEEEEEcCCcccCCHHHHHHHHHHH
Confidence 78999999999 67999999999987
No 57
>2pa4_A UTP-glucose-1-phosphate uridylyltransferase; phosphorylase, nucleotidyltransferase, metabolism; HET: GUD; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=42.01 E-value=46 Score=33.85 Aligned_cols=57 Identities=14% Similarity=-0.061 Sum_probs=38.1
Q ss_pred CCeEEEEeccCCCCcchhhHHHHHhhcccCCccEEEEEcCCCCCC-HHHHHHHHHHhhcC
Q 005700 281 GANIVYRHRILRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPN-PDFLRRTVPHFKDN 339 (682)
Q Consensus 281 ~v~v~~~~r~~~~g~KagaLn~gl~~~~~a~~d~Vl~lDaD~~~~-pd~L~~lv~~~~~~ 339 (682)
+.++.+...+...| -++++..+.... ..+.|+++++.+|...+ +..+++++..+..+
T Consensus 104 g~~i~~~~~~~~~G-t~~al~~a~~~l-~~~~d~~lv~~~D~~~~~~~~l~~l~~~~~~~ 161 (323)
T 2pa4_A 104 LIKAVPVTQDKPLG-LGHAVGLAESVL-DDDEDVVAVMLPDDLVLPTGVMERMAQVRAEF 161 (323)
T ss_dssp HCEEEEEECSSCCC-HHHHHHTTGGGS-CSSCCEEEEECTTEEEESSCHHHHHHHHHHTT
T ss_pred CcceEEEeCCccCC-cHHHHHHHHHHh-cCCCCeEEEEeCCcccCchHHHHHHHHHHHhc
Confidence 45665554443344 777777776642 12345689999999776 68899999887653
No 58
>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A*
Probab=39.03 E-value=50 Score=33.46 Aligned_cols=89 Identities=16% Similarity=0.224 Sum_probs=48.5
Q ss_pred HHHHHHHHHH-HcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCCeEEEEeccCC--CCc----chhhHHHHHhh
Q 005700 234 EVYQQSIAAV-CNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILR--DGY----KAGNLKSAMNC 306 (682)
Q Consensus 234 ~~l~~tL~Sl-~~qdYP~~~l~ViVvDD~sdd~t~~~l~~~~~~~~~~~v~v~~~~r~~~--~g~----KagaLn~gl~~ 306 (682)
..+.-++.|+ +... +..+.++|++|+-+++..+.+++... ..+..+....-... .+. +.-....-.+.
T Consensus 13 ~~~~vli~Sl~l~~~--~~~~~f~il~~~ls~~~~~~L~~~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~s~~~y~Rl 87 (311)
T 1g9r_A 13 AYLCVAAKSVEAAHP--DTEIRFHVLDAGISEANRAAVAANLR---GGGGNIRFIDVNPEDFAGFPLNIRHISITTYARL 87 (311)
T ss_dssp HHHHHHHHHHHHTCT--TSCCEEEEEESSCCHHHHHHHHHHSG---GGTTTEEEEECCGGGGTTSCCCCTTCCGGGGGGG
T ss_pred HHHHHHHHHHHHHcC--CCCceEEEEECCCCHHHHHHHHHHHH---HcCCEEEEEEcCHHHHhcCccccccCCHHHHHHH
Confidence 6677888999 6543 33566777788777777666665433 33455554322110 000 10000000110
Q ss_pred ---cccCCccEEEEEcCCCCCCHH
Q 005700 307 ---SYVKDYEFVAIFDADFQPNPD 327 (682)
Q Consensus 307 ---~~~a~~d~Vl~lDaD~~~~pd 327 (682)
....+.|-|+.+|+|+++-.|
T Consensus 88 ~l~~ll~~~~kvlyLD~D~iv~~d 111 (311)
T 1g9r_A 88 KLGEYIADCDKVLYLDIDVLVRDS 111 (311)
T ss_dssp GHHHHCCSCSCEEEECSSEEECSC
T ss_pred HHHHHhhhcCEEEEEcCCeEeccC
Confidence 012477999999999987554
No 59
>2e3d_A UTP--glucose-1-phosphate uridylyltransferase; UDP-glucose, carbohydrate, pyrophosphorylase; 1.95A {Escherichia coli}
Probab=36.80 E-value=53 Score=32.84 Aligned_cols=103 Identities=16% Similarity=0.158 Sum_probs=58.1
Q ss_pred eecCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHH---HHHH------------h---hcCCeEEEEe
Q 005700 227 IPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEE---VLKW------------Q---EAGANIVYRH 288 (682)
Q Consensus 227 IP~yNE~~~l~~tL~Sl~~qdYP~~~l~ViVvDD~sdd~t~~~l~~~---~~~~------------~---~~~v~v~~~~ 288 (682)
+|..+ ...+..+++.+.+.. -++ |+|+-+...+...+.+... .... . ..+.++.+..
T Consensus 34 l~i~g-kpli~~~l~~l~~~g--i~~--i~vv~~~~~~~i~~~~~~~~~l~~~l~~~~~~~~l~~~~~~~~~~~~i~~~~ 108 (302)
T 2e3d_A 34 LPLVD-KPLIQYVVNECIAAG--ITE--IVLVTHSSKNSIENHFDTSFELEAMLEKRVKRQLLDEVQSICPPHVTIMQVR 108 (302)
T ss_dssp CEETT-EEHHHHHHHHHHHTT--CCE--EEEEECGGGHHHHHHHSCCHHHHHHHC----CHHHHHHHHTSCTTCEEEEEE
T ss_pred eEECC-eEHHHHHHHHHHHCC--CCE--EEEEeCCCHHHHHHHHhcchhhhhhhhhccchhhhhhhhhccccCcceEEee
Confidence 34444 478888999888764 224 3333332233333322110 0000 0 1256666654
Q ss_pred ccCCCCcchhhHHHHHhhcccCCccEEEEEcCCCCCC----HH---HHHHHHHHhhc
Q 005700 289 RILRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPN----PD---FLRRTVPHFKD 338 (682)
Q Consensus 289 r~~~~g~KagaLn~gl~~~~~a~~d~Vl~lDaD~~~~----pd---~L~~lv~~~~~ 338 (682)
.....| -++++..+.... +.+.++++.+|...+ +. .+++++....+
T Consensus 109 ~~~~~G-t~~al~~a~~~~---~~~~~lv~~~D~~~~~~~~~~~~~~l~~l~~~~~~ 161 (302)
T 2e3d_A 109 QGLAKG-LGHAVLCAHPVV---GDEPVAVILPDVILDEYESDLSQDNLAEMIRRFDE 161 (302)
T ss_dssp CSSCCC-HHHHHHHTHHHH---CSSCEEEECTTEEECTTSSCTTTSTHHHHHHHHHH
T ss_pred CCccCC-HHHHHHHHHHHc---CCCcEEEEcCCccccCccccchHHHHHHHHHHHHh
Confidence 444444 777777777642 346789999999776 45 78899887754
No 60
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*
Probab=36.27 E-value=76 Score=33.79 Aligned_cols=95 Identities=7% Similarity=0.025 Sum_probs=56.0
Q ss_pred eecCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCCeEEEEeccCCCCcchhhHHHHHhh
Q 005700 227 IPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNC 306 (682)
Q Consensus 227 IP~yNE~~~l~~tL~Sl~~qdYP~~~l~ViVvDD~sdd~t~~~l~~~~~~~~~~~v~v~~~~r~~~~g~KagaLn~gl~~ 306 (682)
+|..+. ..+..+++.+.+.. -++ |+|+-+...+.. ++.. ..++.++. .....| -++++..+++.
T Consensus 34 ~~i~gk-pli~~~l~~l~~~g--~~~--iivv~~~~~~~i----~~~~----~~~i~~v~--~~~~~G-~~~sl~~a~~~ 97 (468)
T 1hm9_A 34 HKVAGI-SMLEHVFRSVGAIQ--PEK--TVTVVGHKAELV----EEVL----AGQTEFVT--QSEQLG-TGHAVMMTEPI 97 (468)
T ss_dssp SEETTE-EHHHHHHHHHHTTC--CSE--EEEEECTTHHHH----HHSS----SSSSEEEE--CSSCCC-HHHHHHTTHHH
T ss_pred eEECCc-cHHHHHHHHHHhcC--CCC--EEEEECCCHHHH----HHHh----CCCcEEEe--CCccCC-hHHHHHHHHHH
Confidence 344443 78889999888764 234 333333222222 2111 11444432 223333 66777777764
Q ss_pred cccCCccEEEEEcCCCC-CCHHHHHHHHHHhhc
Q 005700 307 SYVKDYEFVAIFDADFQ-PNPDFLRRTVPHFKD 338 (682)
Q Consensus 307 ~~~a~~d~Vl~lDaD~~-~~pd~L~~lv~~~~~ 338 (682)
. ..+.|.++++++|.- +.++.+++++..+.+
T Consensus 98 ~-~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~ 129 (468)
T 1hm9_A 98 L-EGLSGHTLVIAGDTPLITGESLKNLIDFHIN 129 (468)
T ss_dssp H-TTCCSEEEEEETTCTTCCHHHHHHHHHHHHH
T ss_pred h-ccCCCeEEEEeCCccccCHHHHHHHHHHHHh
Confidence 2 123689999999994 789999999988765
No 61
>1lvw_A Glucose-1-phosphate thymidylyltransferase; protein nucleotide complex, nucleotide binding fold; HET: TYD; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.68.1.6
Probab=36.16 E-value=1e+02 Score=30.80 Aligned_cols=98 Identities=11% Similarity=0.114 Sum_probs=54.6
Q ss_pred eecCCchHHHHHHHHHHHcCCCCCCceEEEEEcC-CCChhHHHHHHHHHHHHhhcCCeEEEEeccCCCCcchhhHHHHHh
Q 005700 227 IPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDD-SDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMN 305 (682)
Q Consensus 227 IP~yNE~~~l~~tL~Sl~~qdYP~~~l~ViVvDD-~sdd~t~~~l~~~~~~~~~~~v~v~~~~r~~~~g~KagaLn~gl~ 305 (682)
+|.++. ..+..+++.+.+.. -.+ |+|+-. ...+...+ ......+.++++.+...+...| -++++..+.+
T Consensus 29 lpi~gk-pli~~~l~~l~~~g--i~~--Iivv~~~~~~~~i~~----~l~~g~~~g~~i~~~~~~~~~G-~~~al~~a~~ 98 (295)
T 1lvw_A 29 LPIYDK-PMIYYPLSVLMLAG--IRD--ILIISTPRDLPLYRD----LLGDGSQFGVRFSYRVQEEPRG-IADAFIVGKD 98 (295)
T ss_dssp SEETTE-ETTHHHHHHHHHTT--CCE--EEEEECTTTHHHHHH----HHTTSGGGTSEEEEEECSSCCC-GGGHHHHTHH
T ss_pred cEECCe-eHHHHHHHHHHHCC--CCe--EEEEeccchHHHHHH----HhhhccccCceEEEeeCCCCCC-hHHHHHHHHH
Confidence 566664 56777788777654 224 444432 22233322 2221112467776654444344 7778877776
Q ss_pred hcccCCccEEEEEcCCCCCCHHHHHHHHHHhh
Q 005700 306 CSYVKDYEFVAIFDADFQPNPDFLRRTVPHFK 337 (682)
Q Consensus 306 ~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~~~ 337 (682)
.. .+.+++++. +|....+..+.+++....
T Consensus 99 ~i--~~~~~~lv~-gD~~~~~~~l~~~l~~~~ 127 (295)
T 1lvw_A 99 FI--GDSKVALVL-GDNVFYGHRFSEILRRAA 127 (295)
T ss_dssp HH--TTSCEEEEE-TTCCEECTTHHHHHHHHH
T ss_pred Hh--CCCcEEEEE-CCccccCcCHHHHHHHHH
Confidence 42 345666666 998653356777777764
No 62
>2e8b_A Probable molybdopterin-guanine dinucleotide biosy protein A; putative protein, molybdenum cofactor, structural G NPPSFA; 1.61A {Aquifex aeolicus}
Probab=32.01 E-value=1.3e+02 Score=27.81 Aligned_cols=78 Identities=10% Similarity=0.111 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCCeEEEEeccCCCCcchhhHHHHHhhcccCCcc
Q 005700 234 EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKDYE 313 (682)
Q Consensus 234 ~~l~~tL~Sl~~qdYP~~~l~ViVvDD~sdd~t~~~l~~~~~~~~~~~v~v~~~~r~~~~g~KagaLn~gl~~~~~a~~d 313 (682)
..++.+++.+.+. .++ |+|+-+.... + .+ . +++++. .+....+-.+++..|++. .+.|
T Consensus 41 pll~~~l~~l~~~---~~~--i~vv~~~~~~------~----~~-~-~~~~v~--~~~~~~g~~~~i~~al~~---~~~~ 98 (201)
T 2e8b_A 41 KVIERVYETAKSV---FKE--VYIVAKDREK------F----SF-L-NAPVVL--DEFEESASIIGLYTALKH---AKEE 98 (201)
T ss_dssp HHHHHHHHHHHTT---CSE--EEEEESCSGG------G----GG-G-TCCEEE--CCCSSCCHHHHHHHHHHH---CSSS
T ss_pred EHHHHHHHHHHHh---CCE--EEEEeCcHHH------h----hc-C-CceEEe--cCCCCCCcHHHHHHHHHH---cCCC
Confidence 4677788877665 234 3333332222 1 01 1 555543 222222477888888874 3478
Q ss_pred EEEEEcCCC-CCCHHHHHH-HH
Q 005700 314 FVAIFDADF-QPNPDFLRR-TV 333 (682)
Q Consensus 314 ~Vl~lDaD~-~~~pd~L~~-lv 333 (682)
.++++++|. .++++.+++ ++
T Consensus 99 ~~lv~~~D~P~i~~~~i~~~l~ 120 (201)
T 2e8b_A 99 NVFVLSGDLPLMKKETVLYVLE 120 (201)
T ss_dssp EEEEEETTCTTCCHHHHHHHHH
T ss_pred CEEEEeCCcCcCCHHHHHHHHh
Confidence 999999999 468999988 77
No 63
>1fxo_A Glucose-1-phosphate thymidylyltransferase; rhamnose, nucleotidyltransferase, pyrophosphorylase, allostery; HET: TMP; 1.66A {Pseudomonas aeruginosa} SCOP: c.68.1.6 PDB: 1fzw_A 1g0r_A* 1g1l_A* 1g23_A* 1g2v_A* 1g3l_A* 1h5r_A* 1h5s_C* 1h5t_A* 1h5s_D* 1h5s_A* 1h5r_B* 1h5s_B* 1h5t_B* 1iim_A* 1iin_A* 3pkp_A* 3pkq_A* 1mp5_A* 1mp3_A* ...
Probab=30.66 E-value=90 Score=31.19 Aligned_cols=98 Identities=12% Similarity=0.079 Sum_probs=53.3
Q ss_pred eecCCchHHHHHHHHHHHcCCCCCCceEEEEEc-CCCChhHHHHHHHHHHHHhhcCCeEEEEeccCCCCcchhhHHHHHh
Q 005700 227 IPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLD-DSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMN 305 (682)
Q Consensus 227 IP~yNE~~~l~~tL~Sl~~qdYP~~~l~ViVvD-D~sdd~t~~~l~~~~~~~~~~~v~v~~~~r~~~~g~KagaLn~gl~ 305 (682)
+|.++. ..+..+++.+.+... .+ |+|+- ....+...+.+ ....+.++++.+...+...| -++++..+.+
T Consensus 28 lpi~gk-pli~~~l~~l~~~gi--~~--I~vv~~~~~~~~i~~~l----~~g~~~g~~i~~~~~~~~~G-~~~al~~a~~ 97 (293)
T 1fxo_A 28 LPVYDK-PMIYYPLSTLMLAGI--RE--ILIISTPQDTPRFQQLL----GDGSNWGLDLQYAVQPSPDG-LAQAFLIGES 97 (293)
T ss_dssp SEETTE-ETTHHHHHHHHHTTC--CE--EEEEECTTTHHHHHHHH----TTSGGGTCEEEEEECSSCCC-GGGHHHHTHH
T ss_pred CeECCE-eHHHHHHHHHHHCCC--CE--EEEEeccccHHHHHHHH----hcccccCceEEEeeCCCCCC-HHHHHHHHHH
Confidence 566665 567777887776542 24 44443 22223333222 21112467776664444344 7778777776
Q ss_pred hcccCCccEEEEEcCCCCCCHHHHHHHHHHhh
Q 005700 306 CSYVKDYEFVAIFDADFQPNPDFLRRTVPHFK 337 (682)
Q Consensus 306 ~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~~~ 337 (682)
.. .+.++++ +.+|....+..+.+++..+.
T Consensus 98 ~i--~~~~~~l-v~gD~~~~~~~l~~~l~~~~ 126 (293)
T 1fxo_A 98 FI--GNDLSAL-VLGDNLYYGHDFHELLGSAS 126 (293)
T ss_dssp HH--TTSEEEE-EETTEEEECTTHHHHHHHHH
T ss_pred Hh--CCCCEEE-EECChhccCccHHHHHHHHH
Confidence 42 2344544 44998653356778887774
No 64
>1w55_A ISPD/ISPF bifunctional enzyme; biosynthetic pathway, isoprenoids, nonmevalonate, transferase; HET: C GPP; 2.3A {Campylobacter jejuni} SCOP: c.68.1.13 d.79.5.1 PDB: 1w57_A*
Probab=30.53 E-value=1.9e+02 Score=30.02 Aligned_cols=87 Identities=17% Similarity=0.195 Sum_probs=53.3
Q ss_pred chHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCCeEEEEeccCCCCcchhhHHHHHhhcccCC
Q 005700 232 EKEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKD 311 (682)
Q Consensus 232 E~~~l~~tL~Sl~~qdYP~~~l~ViVvDD~sdd~t~~~l~~~~~~~~~~~v~v~~~~r~~~~g~KagaLn~gl~~~~~a~ 311 (682)
....+..+++.+.+.... ++ |+|+-+ ..+ .+++. ..+++++ ....| ...++..|++. .+
T Consensus 30 GkPLi~~~l~~l~~~~~~-~~--IvVvt~-~~~----~i~~~-----~~~v~~v----~~g~g-~~~sv~~aL~~---l~ 88 (371)
T 1w55_A 30 NDPLWLYATKNLSSFYPF-KK--IVVTSS-NIT----YMKKF-----TKNYEFI----EGGDT-RAESLKKALEL---ID 88 (371)
T ss_dssp TEEHHHHHHHHHHTTSCC-SC--EEEEES-CHH----HHHTT-----CSSSEEE----ECCSS-HHHHHHHHHTT---CC
T ss_pred CeEHHHHHHHHHHccCCC-Ce--EEEEcC-CHH----HHHHH-----hCCCEEE----eCCCC-hHHHHHHHHHh---cC
Confidence 446888899988763222 24 444444 222 22211 1124433 12223 56778888874 34
Q ss_pred ccEEEEEcCCC-CCCHHHHHHHHHHhhcC
Q 005700 312 YEFVAIFDADF-QPNPDFLRRTVPHFKDN 339 (682)
Q Consensus 312 ~d~Vl~lDaD~-~~~pd~L~~lv~~~~~~ 339 (682)
.|+++++|+|. .++++.+++++..+.++
T Consensus 89 ~d~vlv~~~D~Pli~~~~i~~li~~~~~~ 117 (371)
T 1w55_A 89 SEFVMVSDVARVLVSKNLFDRLIENLDKA 117 (371)
T ss_dssp SSEEEEEETTCTTCCHHHHHHHHTTGGGC
T ss_pred CCeEEEEeCCcccCCHHHHHHHHHHHHhc
Confidence 79999999999 67999999999887653
No 65
>3cgx_A Putative nucleotide-diphospho-sugar transferase; YP_389115.1, joint center for structural genomics; 1.90A {Desulfovibrio desulfuricans subsp}
Probab=29.06 E-value=3.6e+02 Score=25.95 Aligned_cols=47 Identities=13% Similarity=0.278 Sum_probs=36.6
Q ss_pred CCCcchhhHHHHHhhcccCCccEEEEEcCCC-CCCHHHHHHHHHHhhc
Q 005700 292 RDGYKAGNLKSAMNCSYVKDYEFVAIFDADF-QPNPDFLRRTVPHFKD 338 (682)
Q Consensus 292 ~~g~KagaLn~gl~~~~~a~~d~Vl~lDaD~-~~~pd~L~~lv~~~~~ 338 (682)
..++-...|+.|++......++-|+++-+|+ .+.++.|.+++..+.+
T Consensus 83 ~~~gLg~rl~~a~~~~~~~~~~~vliigaD~P~L~~~~l~~a~~~l~~ 130 (242)
T 3cgx_A 83 QGLDLGERMKHAMQKAFDDGYDRVVLMGSDIPDYPCELVQKALNDLQH 130 (242)
T ss_dssp CSSSHHHHHHHHHHHHHHTTCSEEEEECSSCTTCCHHHHHHHHHHTTT
T ss_pred CCCCHHHHHHHHHHHHHhCCCCeEEEEcCCCCCCCHHHHHHHHHHhcc
Confidence 3445778888888753234567899999999 7899999999988764
No 66
>1mc3_A Glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylytransferase, RFFH; HET: TTP; 2.60A {Escherichia coli} SCOP: c.68.1.6
Probab=25.46 E-value=1.2e+02 Score=30.42 Aligned_cols=98 Identities=12% Similarity=0.088 Sum_probs=52.7
Q ss_pred eecCCchHHHHHHHHHHHcCCCCCCceEEEEEcC-CCChhHHHHHHHHHHHHhhcCCeEEEEeccCCCCcchhhHHHHHh
Q 005700 227 IPMCNEKEVYQQSIAAVCNLDWPKSKILIQVLDD-SDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMN 305 (682)
Q Consensus 227 IP~yNE~~~l~~tL~Sl~~qdYP~~~l~ViVvDD-~sdd~t~~~l~~~~~~~~~~~v~v~~~~r~~~~g~KagaLn~gl~ 305 (682)
+|.++. ..+..+++.+.... -.+ |+|+-. ...+...+ ......+.++++.+...+...| -++++..+.+
T Consensus 29 lpi~gk-pli~~~l~~l~~~g--i~~--I~vv~~~~~~~~i~~----~l~~g~~~g~~i~~~~~~~~~G-~~~al~~a~~ 98 (296)
T 1mc3_A 29 LPIYDK-PMIYYPLSVLMLAG--IRE--ILIITTPEDKGYFQR----LLGDGSEFGIQLEYAEQPSPDG-LAQAFIIGET 98 (296)
T ss_dssp SEETTE-ETTHHHHHHHHHTT--CCE--EEEEECTTTHHHHHH----HHTTSGGGTCEEEEEECSSCCC-STHHHHHTHH
T ss_pred eEECCe-eHHHHHHHHHHhCC--CCc--EEEEechhHHHHHHH----HHhcccccCceEEEeccCCCCC-HHHHHHHHHH
Confidence 456664 56777777777643 224 444432 22233322 2221112467776654443344 6777777776
Q ss_pred hcccCCccEEEEEcCCCCCCHHHHHHHHHHhh
Q 005700 306 CSYVKDYEFVAIFDADFQPNPDFLRRTVPHFK 337 (682)
Q Consensus 306 ~~~~a~~d~Vl~lDaD~~~~pd~L~~lv~~~~ 337 (682)
.. .+.+++++. +|....+..+.+++....
T Consensus 99 ~i--~~~~~~lv~-gD~~~~~~~l~~~l~~~~ 127 (296)
T 1mc3_A 99 FL--NGEPSCLVL-GDNIFFGQGFSPKLRHVA 127 (296)
T ss_dssp HH--TTSCEEEEE-TTEEEECSSCHHHHHHHT
T ss_pred Hh--CCCCEEEEE-CCccccccCHHHHHHHHH
Confidence 42 344566655 997543345677777664
No 67
>1ll2_A Glycogenin-1; protein-substrate complex, beta-alpha-beta rossman-like NUCL binding fold, DXD motif, non-proline CIS peptide bond, TRAN; HET: UPG; 1.90A {Oryctolagus cuniculus} SCOP: c.68.1.14 PDB: 1ll3_A 1ll0_A 1zcv_A 1zcu_A 1zdf_A* 1zcy_A 1zdg_A*
Probab=23.29 E-value=3e+02 Score=27.95 Aligned_cols=89 Identities=8% Similarity=0.007 Sum_probs=45.5
Q ss_pred cCCch--HHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCCeEEEEeccCCCC-cch-----hhH
Q 005700 229 MCNEK--EVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDG-YKA-----GNL 300 (682)
Q Consensus 229 ~yNE~--~~l~~tL~Sl~~qdYP~~~l~ViVvDD~sdd~t~~~l~~~~~~~~~~~v~v~~~~r~~~~g-~Ka-----gaL 300 (682)
+.|+. ....-++.|+...+ +...+.| +++|+-++...+.++ ..+..++.+....... .+. .-.
T Consensus 10 ~~d~~Yl~~a~vl~~SL~~~~-s~~~l~v-lv~~~is~~~~~~L~-------~~~~~v~~v~~l~~~~~~~~~~~~~~~~ 80 (333)
T 1ll2_A 10 TTNDAYAKGALVLGSSLKQHR-TSRRLAV-LTTPQVSDTMRKALE-------IVFDEVITVDILDSGDSAHLTLMKRPEL 80 (333)
T ss_dssp ESSHHHHHHHHHHHHHHHHTT-CCSEEEE-EECTTSCHHHHHHHH-------HHCSEEEECCTTSTTSTTHHHHHHCGGG
T ss_pred EeCHHHHHHHHHHHHHHHHhC-CCCCEEE-EEcCCCCHHHHHHHH-------HhCCEEEEEeecCCcchhhcccccccch
Confidence 45665 55566677787643 3445555 567665555555544 2344555443221111 000 000
Q ss_pred HHHHhh---cccCCccEEEEEcCCCCCCH
Q 005700 301 KSAMNC---SYVKDYEFVAIFDADFQPNP 326 (682)
Q Consensus 301 n~gl~~---~~~a~~d~Vl~lDaD~~~~p 326 (682)
.....+ -...++|-|+.+|+|+.+-.
T Consensus 81 ~~t~~Kl~i~~l~~ydrvlYLDaD~lv~~ 109 (333)
T 1ll2_A 81 GVTLTKLHCWSLTQYSKCVFMDADTLVLA 109 (333)
T ss_dssp HHHHHHGGGGGCTTCSEEEEECTTEEECS
T ss_pred HHHHHHHHHhHhcCCCeEEEEeCCEEecc
Confidence 111111 12357899999999997644
No 68
>2xme_A CTP-inositol-1-phosphate cytidylyltransferase; CDP-inositol, DI-MYO-inositol phosphate; 1.89A {Archaeoglobus fulgidus} PDB: 2xmh_A*
Probab=20.11 E-value=1.2e+02 Score=28.58 Aligned_cols=86 Identities=13% Similarity=0.084 Sum_probs=46.7
Q ss_pred hHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhHHHHHHHHHHHHhhcCCeEEEEeccCCCCcchhhHHHHHhhcccCCc
Q 005700 233 KEVYQQSIAAVCNLDWPKSKILIQVLDDSDDPTAQTLIKEEVLKWQEAGANIVYRHRILRDGYKAGNLKSAMNCSYVKDY 312 (682)
Q Consensus 233 ~~~l~~tL~Sl~~qdYP~~~l~ViVvDD~sdd~t~~~l~~~~~~~~~~~v~v~~~~r~~~~g~KagaLn~gl~~~~~a~~ 312 (682)
...+..+++.+.+. . +++ +|+- ...+...+.+ .+ ..+.++.++..+....+-.+++..|++. .+
T Consensus 45 ~pli~~~l~~l~~~-~--~~i--~vv~-~~~~~~~~~~---~~---~~~~~~~~v~~~~~~~g~~~~i~~a~~~---~~- 108 (232)
T 2xme_A 45 CEIILRTMKLLSPH-V--SEF--IIVA-SRYADDIDAF---LK---DKGFNYKIVRHDRPEKGNGYSLLVAKNH---VE- 108 (232)
T ss_dssp EEHHHHHHHHHGGG-E--EEE--EEEE-STTHHHHHHH---HT---TSCCCEEEEECSCGGGCHHHHHHTTGGG---CC-
T ss_pred EEHHHHHHHHHHHh-C--CEE--EEEe-CChHHHHHHH---HH---hcCCcEEEEECCCCCCCcHHHHHHHHHH---CC-
Confidence 36788888888765 2 243 3333 2333332221 11 2244455543322211256677777764 23
Q ss_pred cEEEEEcCCCCCCHHHHHHHHH
Q 005700 313 EFVAIFDADFQPNPDFLRRTVP 334 (682)
Q Consensus 313 d~Vl~lDaD~~~~pd~L~~lv~ 334 (682)
+.++++.+|...+++.+++++.
T Consensus 109 ~~~lv~~~D~p~~~~~~~~l~~ 130 (232)
T 2xme_A 109 DRFILTMGDHVYSQQFIEKAVR 130 (232)
T ss_dssp SSEEEEETTEEECHHHHHHHTT
T ss_pred CCEEEEcCCcccCHHHHHHHHh
Confidence 3456788999778888877654
Done!