Query 005706
Match_columns 682
No_of_seqs 199 out of 307
Neff 5.5
Searched_HMMs 29240
Date Mon Mar 25 05:08:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005706.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005706hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1nkg_A Rhamnogalacturonase B; 100.0 1E-129 5E-134 1084.7 52.8 494 56-678 1-508 (508)
2 2nsm_A Carboxypeptidase N cata 97.9 3E-05 1E-09 85.3 9.4 96 383-502 320-416 (439)
3 1h8l_A Carboxypeptidase GP180 97.8 8.2E-05 2.8E-09 80.3 10.7 78 383-481 300-378 (380)
4 3mn8_A LP15968P; catalytic dom 97.7 6.2E-05 2.1E-09 82.9 8.2 90 384-494 337-428 (435)
5 1uwy_A Carboxypeptidase M; met 97.6 6E-05 2.1E-09 82.7 7.4 90 383-495 295-390 (426)
6 1xpn_A Hypothetical protein PA 96.7 0.0072 2.5E-07 58.5 10.4 105 370-475 28-166 (170)
7 3qec_A Putative carbohydrate b 96.3 0.023 8E-07 53.9 10.5 95 380-475 20-146 (150)
8 4aw7_A GH86A beta-porphyranase 96.1 0.007 2.4E-07 68.6 7.2 72 585-663 502-575 (591)
9 2w87_A Esterase D, XYL-CBM35; 95.8 0.053 1.8E-06 50.3 10.6 90 575-680 41-132 (139)
10 2wz8_A Cellulosome protein doc 95.4 0.059 2E-06 51.2 9.4 87 574-677 48-147 (156)
11 2w3j_A Carbohydrate binding mo 94.9 0.095 3.3E-06 49.0 9.1 87 575-679 41-129 (145)
12 2w47_A Lipolytic enzyme, G-D-S 94.7 0.13 4.5E-06 47.6 9.4 89 575-680 42-132 (144)
13 2bgo_A Endo-B1,4-mannanase 5C; 94.2 0.23 7.8E-06 46.6 9.7 89 571-680 34-123 (140)
14 2vzp_A Aocbm35, EXO-beta-D-glu 93.3 0.28 9.6E-06 44.2 8.5 85 575-676 41-127 (127)
15 3kcp_A Cellulosomal-scaffoldin 93.1 0.17 5.7E-06 53.4 7.6 62 382-456 156-223 (321)
16 2xsu_A Catechol 1,2 dioxygenas 90.4 0.56 1.9E-05 49.5 7.9 63 382-447 135-202 (312)
17 2azq_A Catechol 1,2-dioxygenas 88.4 1 3.4E-05 47.5 8.0 64 381-447 130-198 (311)
18 2boy_A 3-chlorocatechol 1,2-di 88.4 0.55 1.9E-05 48.2 5.8 65 381-448 100-169 (254)
19 2cdp_A Beta-agarase 1; carbohy 88.1 1 3.4E-05 42.7 7.2 82 584-677 77-159 (160)
20 1uxz_A Cellulase B; carbohydra 86.7 2.6 8.9E-05 38.2 8.9 77 585-678 52-129 (131)
21 3t63_M 3,4-PCD, protocatechuat 86.4 0.98 3.4E-05 45.9 6.3 67 379-448 73-149 (238)
22 3th1_A Chlorocatechol 1,2-diox 86.3 0.72 2.5E-05 47.5 5.3 64 382-448 98-166 (260)
23 2bum_B Protocatechuate 3,4-dio 86.3 1.4 4.9E-05 44.8 7.4 65 381-448 76-150 (241)
24 1tmx_A Hydroxyquinol 1,2-dioxy 84.3 1.1 3.9E-05 46.8 5.8 65 381-448 131-199 (293)
25 2bum_A Protocatechuate 3,4-dio 83.7 1.5 5E-05 43.7 6.0 64 381-447 50-124 (209)
26 1dmh_A 1,2-CTD, catechol 1,2-d 82.7 1.1 3.8E-05 47.2 4.9 63 383-448 133-202 (311)
27 3n9t_A PNPC; phospholipid bind 82.7 1.4 4.9E-05 45.9 5.7 66 380-448 126-196 (290)
28 2y8k_A Arabinoxylanase, carboh 81.7 6.3 0.00022 43.4 10.9 87 575-680 398-484 (491)
29 3t63_A 3,4-PCD, protocatechuat 81.4 1.6 5.3E-05 43.3 5.2 65 381-448 46-116 (200)
30 3hhy_A 1,2-CTD, catechol 1,2-d 81.2 1.5 5E-05 45.6 5.1 63 383-448 131-198 (280)
31 2h4e_A Transthyretin; amyloid, 79.8 2.4 8.2E-05 39.1 5.5 63 382-452 8-75 (127)
32 3o5u_A Chlorocatechol 1,2-diox 78.2 2.7 9.3E-05 43.1 5.9 63 382-447 102-170 (257)
33 1ti6_B Pyrogallol hydroxytrans 78.2 2.7 9.1E-05 43.3 5.9 48 428-480 227-274 (274)
34 2g2n_A Transthyretin-like prot 77.8 3.2 0.00011 37.5 5.6 62 382-452 2-68 (114)
35 3oba_A Beta-galactosidase; TIM 75.0 65 0.0022 39.1 17.5 42 55-97 745-786 (1032)
36 1w9s_A BH0236 protein, BHCBM6; 72.0 31 0.0011 31.4 11.0 82 585-678 58-140 (142)
37 1oo2_A Transthyretin; retinol- 71.7 4.7 0.00016 36.7 5.1 60 385-452 3-67 (119)
38 4ank_A Transthyretin; hormone 69.7 6.6 0.00023 37.0 5.8 62 383-452 29-95 (147)
39 3irp_X URO-adherence factor A; 69.5 7.2 0.00025 42.7 6.9 63 382-453 304-372 (429)
40 1f86_A Transthyretin Thr119Met 68.9 7.4 0.00025 35.2 5.7 49 399-452 14-66 (115)
41 1uxx_X Xylanase U; carbohydrat 68.0 36 0.0012 30.7 10.3 78 586-680 51-130 (133)
42 2v4v_A GH59 galactosidase; hyd 67.8 36 0.0012 30.4 10.2 79 586-677 49-128 (129)
43 1tg7_A Beta-galactosidase; TIM 62.3 3.7 0.00013 49.4 3.1 45 600-661 885-930 (971)
44 3qva_A Transthyretin-like prot 58.5 19 0.00064 32.6 6.3 58 382-452 8-69 (116)
45 3lvt_A Glycosyl hydrolase, fam 58.3 61 0.0021 38.6 12.6 124 48-181 498-667 (899)
46 3e8v_A Possible transglutamina 56.9 69 0.0024 27.3 9.2 58 386-457 3-64 (82)
47 3kpt_A Collagen adhesion prote 56.7 10 0.00035 40.2 5.1 46 399-452 20-65 (355)
48 2pz4_A Protein GBS052; SPAB, G 56.0 11 0.00037 37.6 4.9 75 398-475 140-224 (239)
49 1od3_A Putative xylanase; hydr 55.7 74 0.0025 30.0 10.4 77 586-679 90-166 (168)
50 4hg6_B Cellulose synthase subu 55.6 13 0.00046 43.0 6.0 77 572-660 319-402 (707)
51 2ww8_A RRGA, cell WALL surface 53.4 31 0.001 41.3 8.8 81 382-474 46-128 (893)
52 3iwv_A 5-hydroxyisourate hydro 53.2 11 0.00037 35.2 3.9 62 383-452 25-92 (138)
53 1uy4_A Endo-1,4-beta-xylanase 53.1 86 0.0029 28.7 10.2 76 586-678 68-143 (145)
54 2vzs_A CSXA, EXO-beta-D-glucos 51.6 3.1 0.00011 50.4 0.0 86 574-676 945-1032(1032)
55 4hg6_B Cellulose synthase subu 49.1 13 0.00044 43.1 4.6 74 571-661 61-139 (707)
56 3fn9_A Putative beta-galactosi 47.1 11 0.00038 43.6 3.7 69 572-662 63-132 (692)
57 1yua_A Topoisomerase I; gene-r 46.8 7.8 0.00027 34.9 1.8 47 160-208 23-72 (122)
58 1r6v_A Subtilisin-like serine 46.7 36 0.0012 39.4 7.8 59 383-451 445-503 (671)
59 2x5p_A FBA2, fibronectin bindi 45.3 41 0.0014 30.4 6.4 43 399-452 40-82 (121)
60 3c7f_A Xylanase D, endo-1,4-be 43.7 1.1E+02 0.0038 33.3 10.9 80 586-677 406-485 (487)
61 2h0e_A Transthyretin-like prot 43.6 27 0.00092 31.8 4.9 57 384-452 9-71 (121)
62 3phz_A Ricin B-related lectin; 43.5 31 0.0011 35.8 6.0 97 387-511 67-170 (286)
63 3lpf_A Beta-glucuronidase; alp 42.9 21 0.00071 40.5 5.0 67 573-661 71-138 (605)
64 1cwv_A Invasin; integrin-bindi 41.9 1.2E+02 0.0041 33.5 10.9 74 384-471 28-103 (492)
65 3cmg_A Putative beta-galactosi 41.2 16 0.00054 41.9 3.7 68 572-661 52-120 (667)
66 1yq2_A Beta-galactosidase; gly 40.0 17 0.00059 44.0 3.9 68 572-661 121-191 (1024)
67 3bga_A Beta-galactosidase; NYS 39.1 17 0.00058 44.0 3.7 67 573-661 130-196 (1010)
68 3kpt_A Collagen adhesion prote 37.3 40 0.0014 35.6 5.9 51 398-451 263-313 (355)
69 2pz4_A Protein GBS052; SPAB, G 36.1 14 0.00047 36.9 1.9 26 427-452 71-96 (239)
70 3d3a_A Beta-galactosidase; pro 35.6 21 0.00072 40.8 3.5 67 571-662 509-575 (612)
71 3gm8_A Glycoside hydrolase fam 34.6 24 0.00083 41.5 4.0 68 573-662 70-137 (801)
72 3pe9_A Fibronectin(III)-like m 34.1 84 0.0029 27.2 6.4 44 424-468 42-85 (98)
73 4fxt_A Uncharacterized protein 33.3 1.4E+02 0.0049 29.3 8.6 63 383-454 7-70 (202)
74 3hn5_A Putative exported prote 32.9 1.1E+02 0.0036 30.6 7.6 60 383-451 10-71 (215)
75 2wyh_A Alpha-mannosidase; hydr 32.1 3.6E+02 0.012 31.9 13.6 129 47-180 520-690 (923)
76 3uaf_A TTR-52; beta barrel/san 31.8 53 0.0018 29.5 4.9 50 383-439 4-55 (117)
77 3blc_A Inner membrane protein 31.2 31 0.001 36.0 3.7 31 61-91 32-62 (330)
78 1jz7_A Lactase, beta-galactosi 30.9 42 0.0014 40.7 5.2 37 59-96 740-776 (1023)
79 1jz7_A Lactase, beta-galactosi 30.6 20 0.00069 43.4 2.4 68 572-661 122-190 (1023)
80 3v9f_A Two-component system se 30.5 52 0.0018 37.5 5.8 26 427-452 731-756 (781)
81 4a2l_A BT_4663, two-component 27.4 47 0.0016 37.9 4.7 26 427-452 737-762 (795)
82 3oba_A Beta-galactosidase; TIM 26.2 23 0.0008 42.9 1.9 68 572-661 115-183 (1032)
83 3og2_A Beta-galactosidase; TIM 25.7 60 0.0021 39.2 5.2 44 599-659 916-960 (1003)
84 3ott_A Two-component system se 25.4 57 0.0019 37.0 4.8 27 427-453 702-729 (758)
85 4e8d_A Glycosyl hydrolase, fam 25.1 21 0.00071 40.8 1.1 43 598-658 527-569 (595)
86 4eiu_A Uncharacterized hypothe 21.8 4.6E+02 0.016 26.6 10.1 63 383-451 9-76 (249)
87 1b4r_A Protein (PKD1_human); P 21.6 83 0.0028 26.3 3.9 28 441-468 52-79 (80)
88 2x9z_A RRGB, cell WALL surface 21.3 1.4E+02 0.0048 30.1 6.3 61 383-450 156-219 (262)
89 3nbc_A Ricin B-like lectin; la 20.6 50 0.0017 30.7 2.6 49 387-447 15-71 (148)
No 1
>1nkg_A Rhamnogalacturonase B; polysaccharide lyase, carbohydrate active enzyme, pectin, LY; 1.50A {Aspergillus aculeatus} SCOP: b.3.1.2 b.18.1.25 b.30.5.10 PDB: 2xhn_A* 3njv_A* 3njx_A
Probab=100.00 E-value=1.4e-129 Score=1084.73 Aligned_cols=494 Identities=19% Similarity=0.276 Sum_probs=441.2
Q ss_pred cEEEEEeCcEEEEECC---eEEEEEeCCCeeEEEEEEcCeecccccccCCCcceeeEEEeCCCCCCCceeeeccceEEEE
Q 005706 56 AVRLHIKDHHVVLDNG---ILQVTLSKPGGIVTGIRYNGIDNLLEFRNKETNRGYWDLMWNPPGGKGMFDVISGTSFRVV 132 (682)
Q Consensus 56 ~~~~~~~g~~~vidNg---~l~vtv~k~~G~itsi~y~G~enll~~~~~~~~~gY~D~~w~~~g~~g~~~~~~gt~~~vi 132 (682)
||++++++++|||||| +|+|+|+|++|+||||+|+|+|+|+ .++++|+| ++ . ....++ +
T Consensus 1 ~~g~t~~~~~~vvd~g~n~~l~~tv~k~~G~itsi~y~G~e~~~--~~~~s~~g-------sg--~------G~~~~~-~ 62 (508)
T 1nkg_A 1 AFGITTSSSAYVIDTNAPNQLKFTVSRSSCDITSIIHYGTELQY--SSQGSHIG-------SG--L------GSATVT-A 62 (508)
T ss_dssp CCEEEECSSEEEEECCCTTCEEEEEETTTCCEEEEEETTEECBC--SSSCBEET-------TC--C------SSCEEE-E
T ss_pred CccEEecCCEEEEECCCCCEEEEEEeCCCceEEEEEECCEEccc--cCCCcccc-------cC--C------CcceEE-E
Confidence 5899999999999654 9999999999999999999999665 58899998 22 1 112344 4
Q ss_pred EecCCEEEEEEEEeecCCCCCCcccceeeEEEEEecCCceeEEEEEeeccccCCCCCccceEEEEEeCccCccceeeecc
Q 005706 133 VENEEQVELSFLRTWASSHEGNYIPLNIDKRFIMLRGSSGFYSYAIYEHLKEWPAFTLGQTRFTFKLRKEKFRYMVIADN 212 (682)
Q Consensus 133 ~~~~~~i~Vs~~~~~~~s~~g~~~~l~l~~~~v~r~G~sgiY~y~~~~~~~~~p~~~lgE~R~v~Rl~~~~f~~~~~~d~ 212 (682)
.+++++|+|||++ + +||||||||+|++|||||+++++ +++|+|+|+|||||+++|++
T Consensus 63 ~~~~~~i~vs~~~-------~-----~l~~~~v~~~g~sg~Y~y~~~~~-----~~~lge~R~v~Rl~~~~f~~------ 119 (508)
T 1nkg_A 63 TQSGDYIKVTCVT-------D-----TLTQYMVVHNGDPIIHMATYITA-----EPSIGELRFIARLNSDLLPN------ 119 (508)
T ss_dssp EEETTEEEEEEEC-------S-----SEEEEEEEETTCCEEEEEEEESS-----CCTTSCEEEEEEECTTTCCE------
T ss_pred EecCCEEEEEEEe-------C-----CceEEEEEeCCCceEEEEEeecc-----CCCCCceEEEEEcChhhCCC------
Confidence 4468999999998 3 89999999999999999999975 78999999999999999975
Q ss_pred ccccCCCCcCCCCCCCccccccceeeecCCCCCCCCceeeeeeeccccccccceEEEEeCCCceEEEEEcCCCCcccCCC
Q 005706 213 RHRQMPLPEDLSTGRGQPLAYPEAVQLVNPTDPEHQGEVDDKYQYSCENKDLKVHGWICRTTPVGFWLIIPSDEFRSGGP 292 (682)
Q Consensus 213 r~~~mP~~~d~~~~~~~~l~~~da~~l~~~~~~~~~G~~~sKY~~s~~~~D~~vhG~~s~g~~vG~W~I~ps~E~~sGGP 292 (682)
.+++||+|+++ ++++++.+|++.+ +|+++||||||+++||++||||+ +++||||||+|++||++|||
T Consensus 120 ~~r~~~~p~~~---~~~~v~~~d~~~l--------~G~~~~KY~~s~~~~D~~vhG~~--~~~vG~w~I~~s~E~~sGGP 186 (508)
T 1nkg_A 120 EEPFGDVSTTA---DGTAIEGSDVFLV--------GSETRSKFYSSERFIDDQRHCIA--GDAHRVCMILNQYESSSGGP 186 (508)
T ss_dssp EETTGGGGCCT---TCEEEETTTEEEE--------TTEEEEGGGGCCBGGGCSEEEEE--CSSCEEEEECCCCTTCSSCT
T ss_pred ccccCCCCccc---cCcEeeeccceee--------CCEEccceeccccceecceEEEE--CCCeEEEEEcCCcccccCCC
Confidence 26899999874 5888999999776 79999999999999999999999 59999999999999999999
Q ss_pred ceeccccccCC---cEEEEEeecccccccceeecCCCCCCceeeeeEEEEEcCCCCCCCcchhHHHHHHHhhhhccCCCC
Q 005706 293 LKQNLTSHVGP---TTLAVFLSGHYAGKYMETHIGQDEPWKKVFGPVFIYLNSAADGDDPLWLWEDAKIKMMSEVQSWPY 369 (682)
Q Consensus 293 ~kqdL~~h~g~---~~l~y~~s~Hy~g~~~~~~~~~Ge~w~Kv~GP~~~y~N~g~~~~~~~~l~~DA~~~~~~E~~~Wpy 369 (682)
|||||++|++| ++|+||+|+|+ ++++++.| ||||||||||++++++ ++|||
T Consensus 187 ~kqdL~~h~~~~~~~~~~y~~s~H~----~t~~~~~g-----~~GP~~~y~n~g~~~~-----------------~~wpy 240 (508)
T 1nkg_A 187 FHRDINSNNGGSYNALYWYMNSGHV----QTESYRMG-----LHGPYSMYFSRSGTPS-----------------TSIDT 240 (508)
T ss_dssp TCBCCCEEECSSCEEEEEEEECSTT----CCSCCCCE-----EEEEEEEEEESSCCCC-----------------SCCCC
T ss_pred cchhhhccCCcccceeeeeEeeccc----cccccccc-----ccccEEEEECCCCCCC-----------------CCCCC
Confidence 99999999999 89999999997 46667765 9999999999998863 68999
Q ss_pred CCCCC---CCCCCCCCCeEEEEEEEeccCCCccccCeeEEEecCCCCCCCcccccccceeEEEeCCCCceEeCCccCcee
Q 005706 370 NFPAS---EDFQKSEERGCVSGRLLVQDSNDVISANGAYVGLAPPGDVGSWQTECKDYQFWTTADEDGCFSIKNIRTGNY 446 (682)
Q Consensus 370 ~f~~s---~~y~~~~qRGtVsG~v~~~D~~~~~pa~~a~V~L~~~~~~gs~q~~~k~yqYwt~td~~G~FtI~nVrpGtY 446 (682)
+|++| ++|||+++||+|+|+|+ |. .++..++|+|. +|+|||||+||++|+|+|++||||+|
T Consensus 241 sf~~s~~~~~y~~~~~RGtVsG~V~---G~--~~~~~avv~~~-----------~k~~qywt~td~~G~FtI~~V~pGtY 304 (508)
T 1nkg_A 241 SFFADLDIKGYVAASGRGKVAGTAS---GA--DSSMDWVVHWY-----------NDAAQYWTYTSSSGSFTSPAMKPGTY 304 (508)
T ss_dssp GGGGGTTCTTCCCGGGCBEEEEEEE---SS--CTTSCEEEEEE-----------CSSCEEEEECCTTCEEECCCBCSEEE
T ss_pred ccccccCccCCcCcccccEEEEEEc---Cc--cCCceEEEEEc-----------CCCceeEEEECCCCcEEeCCcCCceE
Confidence 99999 99999999999999988 32 14445677764 48999999999999999999999999
Q ss_pred EEEEEECceeeeeeeeeEEEEeCCceeeecceEEcCCCCCCCeeEEeccCCCccccccCCCCccccccccccCCchhhcc
Q 005706 447 NLYAWVPGFVGDYRSDALVTITSGSNIKMGDLVYEPPRDGPTLWEIGIPDRSAREFNVPDPDPKYVNRLFVNHPDRFRQY 526 (682)
Q Consensus 447 ~L~a~~~G~~G~~~~~~~VtV~aG~t~~lg~l~~~~~~~g~~LWeIGi~Drta~eF~~~d~~~~~~nk~~~~hp~~~R~y 526 (682)
+|+||++|+ ...+.+|+|++|++++++ |+|+++ ++++|||||+|||+|.||+++|+. .+|||+|+|||
T Consensus 305 ~L~a~~~G~---~~~~~~VtV~aG~t~~l~-i~~~~~-~g~~iW~IG~pDrta~eF~~~d~~-------~~~hp~~~r~~ 372 (508)
T 1nkg_A 305 TMVYYQGEY---AVATSSVTVSAGSTTTKN-ISGSVK-TGTTIFKIGEWDGQPTGFRNAANQ-------LRMHPSDSRMS 372 (508)
T ss_dssp EEEEEETTE---EEEEEEEEECTTCEEECC-EECCCC-CCSEEEEEECSSSSCTTSBTHHHH-------TTSCTTCTTSC
T ss_pred EEEEEECce---EEEEeEEEEcCCCeeEee-eEEecC-CCCeeEEeeCCCCCchhhcCCCcc-------cccCcchhccc
Confidence 999999987 356777999999999996 999876 799999999999999999999843 25799999999
Q ss_pred cccccccccCCCCCeeEEeeccCCCCCceeEEEEEecCCcccCcccEEEEEEeCCCCCCCcEEEEEEEeccC-CCeEEEE
Q 005706 527 GLWSRYTELYPNEDLVYTIGVSDYSKDWFFAQVVREMDNKTYQGTTWQIKFKLDHVDRNSSYKLRVAIASAT-LAELQVR 605 (682)
Q Consensus 527 glW~~y~~~~P~~dl~ytVG~S~~~~Dw~ya~~~~~~~~~~~~~~~w~I~F~L~~~~~~~~~tLriala~a~-~~~~~V~ 605 (682)
+|+ ||+||||+|++ +|||||||+ .++ ++|+|+|+|+++| .+++||||+||+|. ++++||+
T Consensus 373 -~W~---------~l~ytVG~S~~-~Dw~ya~~~--~~~-----~~w~I~F~l~~~~-~~~~tLri~la~a~a~~~~qV~ 433 (508)
T 1nkg_A 373 -SWG---------PLTYTVGSSAL-TDFPMAVFK--SVN-----NPVTIKFTATSAQ-TGAATLRIGTTLSFAGGRPQAT 433 (508)
T ss_dssp -CCC---------SCEEETTTSCG-GGSBSEEET--TTT-----CCEEEEEEECGGG-CSCEEEEEEEEEEETTCEEEEE
T ss_pred -ccC---------CeEEEeCcCch-hcCCeEEEC--CCC-----CcEEEEEEcCccc-CCceEEEEEehhhccCCCeEEE
Confidence 994 79999999999 799999995 555 8999999999987 78999999999985 8999999
Q ss_pred EcCCCCCCCcccccccCCCCceecceeeeeeEEEEEEeeCCCeeeeecEEEEEeecCCC--CCc--eEEEEEEEEec
Q 005706 606 VNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIEGENTIFLKQPRCTS--PFQ--GIMYDYIRLEG 678 (682)
Q Consensus 606 vN~~~~~~p~~~~~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~NtI~lt~~~gss--~f~--~vmyD~IrLe~ 678 (682)
|||+ .. ++|.++.+++||||+||++||+|++++|+||+++|++|+|+|+|+++++++ +|| +|||||||||.
T Consensus 434 VN~~-~~-~~~~~~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~NtI~lt~~~~s~~~~fls~~vmyD~I~L~~ 508 (508)
T 1nkg_A 434 INSY-TG-SAPAAPTNLDSRGVTRGAYRGLGEVYDVSIPSGTIVAGTNTITINVISGSSGDTYLSPNFIFDCVELFQ 508 (508)
T ss_dssp ETTE-EC-CCCCCCCCCCSCCGGGTCCCSCCCEEEEEECTTSSCSEEEEEEEEEECSCCCSGGGSSEEEEEEEEEEC
T ss_pred ECCc-CC-cCccccccCCCCeEEecceeeeeEEEEEEEcHHHeecCceEEEEEeccCCCCCccccccEEEEEEEecC
Confidence 9994 33 678899999999999999999999999999999999999999999999986 588 99999999984
No 2
>2nsm_A Carboxypeptidase N catalytic chain; caroxypeptidase, zinc peptidase, transthyretin-like domain, processing, peptide modification, hydrolase; HET: NAG; 2.10A {Homo sapiens}
Probab=97.86 E-value=3e-05 Score=85.31 Aligned_cols=96 Identities=15% Similarity=0.197 Sum_probs=61.8
Q ss_pred CeEEEEEEEeccCCCccccCeeEEEecCCCCCCCcccccccceeEEEeCCCCceEeCCccCceeEEEEEECceeeeeeee
Q 005706 383 RGCVSGRLLVQDSNDVISANGAYVGLAPPGDVGSWQTECKDYQFWTTADEDGCFSIKNIRTGNYNLYAWVPGFVGDYRSD 462 (682)
Q Consensus 383 RGtVsG~v~~~D~~~~~pa~~a~V~L~~~~~~gs~q~~~k~yqYwt~td~~G~FtI~nVrpGtY~L~a~~~G~~G~~~~~ 462 (682)
.+.|+|+|+..++ .|..+|.|.+.+ ....+.||.+|.|.+ .++||+|+|++...|+. ...
T Consensus 320 ~~~i~G~V~D~~g---~pi~gA~V~v~~-------------~~~~~~Td~~G~y~~-~l~~G~Y~l~vs~~Gy~---~~~ 379 (439)
T 2nsm_A 320 HQGIKGMVLDQNY---NNLANAVISVSG-------------INHDVTSGDHGDYFR-LLLPGIYTVSATAPGYD---PET 379 (439)
T ss_dssp SCSEEEEEECTTS---CBCTTCEEEETT-------------EEEEEECCTTSEEEE-CCCSEEEEEEEECTTEE---CEE
T ss_pred ccceEEEEEcCCC---CCccceEEEEEc-------------ccceeEECCCCeEEE-ccCCeeEEEEEEecCce---eEE
Confidence 5889999986555 589999999943 456789999999988 59999999999998864 444
Q ss_pred eEEEE-eCCceeeecceEEcCCCCCCCeeEEeccCCCcccc
Q 005706 463 ALVTI-TSGSNIKMGDLVYEPPRDGPTLWEIGIPDRSAREF 502 (682)
Q Consensus 463 ~~VtV-~aG~t~~lg~l~~~~~~~g~~LWeIGi~Drta~eF 502 (682)
..|+| .+++++. ++++.+. ..+|-||.+.+.+..+.
T Consensus 380 ~~v~v~~~~~~~~--~~~L~~~--~~~L~eVvV~~~~~~~~ 416 (439)
T 2nsm_A 380 VTVTVGPAEPTLV--NFHLKRS--IPQVSPVRRAPSRRHGV 416 (439)
T ss_dssp EEEEECSSSCEEC--CEECEEC-------------------
T ss_pred EEEEEecCCcceE--eEEEccC--CCccccEEEecCCCCCc
Confidence 56888 5666543 6877543 67999999988665433
No 3
>1h8l_A Carboxypeptidase GP180 residues 503-882; hydrolase, zinc-dependent protease; HET: NAG BMA NDG GEM; 2.6A {Lophonetta specularioides} SCOP: b.3.2.1 c.56.5.1 PDB: 1qmu_A*
Probab=97.76 E-value=8.2e-05 Score=80.26 Aligned_cols=78 Identities=18% Similarity=0.217 Sum_probs=63.4
Q ss_pred CeEEEEEEEec-cCCCccccCeeEEEecCCCCCCCcccccccceeEEEeCCCCceEeCCccCceeEEEEEECceeeeeee
Q 005706 383 RGCVSGRLLVQ-DSNDVISANGAYVGLAPPGDVGSWQTECKDYQFWTTADEDGCFSIKNIRTGNYNLYAWVPGFVGDYRS 461 (682)
Q Consensus 383 RGtVsG~v~~~-D~~~~~pa~~a~V~L~~~~~~gs~q~~~k~yqYwt~td~~G~FtI~nVrpGtY~L~a~~~G~~G~~~~ 461 (682)
.++|+|+|+.. ++ .|..+|.|.+.+ ....+.||++|.|.+ +++||+|+|.+...|+. ..
T Consensus 300 ~~~i~G~V~D~~~g---~pi~~A~V~v~~-------------~~~~~~Td~~G~y~~-~l~~G~Y~l~vs~~Gy~---~~ 359 (380)
T 1h8l_A 300 HRGIWGFVLDATDG---RGILNATISVAD-------------INHPVTTYKDGDYWR-LLVQGTYKVTASARGYD---PV 359 (380)
T ss_dssp GCEEEEEEEETTTC---SBCTTCEEEETT-------------EEEEEECCTTSEEEE-CCCSEEEEEEEECTTBC---CE
T ss_pred cccceEEEEeCCCC---CccCceEEEEec-------------CcceeEECCCEEEEE-ecCCCcEEEEEEEcCcc---ce
Confidence 58999999976 34 588999999953 445789999999999 59999999999998875 44
Q ss_pred eeEEEEeCCceeeecceEEc
Q 005706 462 DALVTITSGSNIKMGDLVYE 481 (682)
Q Consensus 462 ~~~VtV~aG~t~~lg~l~~~ 481 (682)
+..|+|.+++++.+ ++.++
T Consensus 360 ~~~v~v~~~~~~~~-~~~L~ 378 (380)
T 1h8l_A 360 TKTVEVDSKGGVQV-NFTLS 378 (380)
T ss_dssp EEEEEECSSCEEEC-CEEEC
T ss_pred EEEEEEcCCCeEEE-EEEec
Confidence 55799999987776 57664
No 4
>3mn8_A LP15968P; catalytic domain of alpha/beta-hydrolase fold, C-terminal, A transthyretin-like domain, hydrolase; HET: NAG GEM; 2.70A {Drosophila melanogaster}
Probab=97.68 E-value=6.2e-05 Score=82.91 Aligned_cols=90 Identities=16% Similarity=0.145 Sum_probs=61.6
Q ss_pred eEEEEEEEeccCCCccccCeeEEEecCCCCCCCcccccccceeEEEeCCCCceEeCCccCceeEEEEEECceeeeeeeee
Q 005706 384 GCVSGRLLVQDSNDVISANGAYVGLAPPGDVGSWQTECKDYQFWTTADEDGCFSIKNIRTGNYNLYAWVPGFVGDYRSDA 463 (682)
Q Consensus 384 GtVsG~v~~~D~~~~~pa~~a~V~L~~~~~~gs~q~~~k~yqYwt~td~~G~FtI~nVrpGtY~L~a~~~G~~G~~~~~~ 463 (682)
..|+|+|+..+| .|..+|.|.+.+. ....+.||++|.|.+. ++||+|+|++.+.|+.. ....
T Consensus 337 ~gv~G~V~D~~G---~pi~gA~V~v~g~------------~~~~~~Td~~G~y~~~-l~pG~Y~l~vs~~Gy~~--~~~~ 398 (435)
T 3mn8_A 337 IGIKGLVTDASG---FPIADANVYVAGL------------EEKPMRTSKRGEYWRL-LTPGLYSVHASAFGYQT--SAPQ 398 (435)
T ss_dssp SSEEEEEECSSS---CBCTTCEEEETTC------------TTSCEECCTTCEEEEC-CCSEEEEEEEEBTTBCC--CCCE
T ss_pred ceeEEEEECCCC---CccCceEEEEecc------------cccceEeCCCCeEEEe-cCCCcEEEEEEEccccc--ceEE
Confidence 459999987665 5899999999531 1346789999999885 99999999999988721 3456
Q ss_pred EEEEeCCc--eeeecceEEcCCCCCCCeeEEec
Q 005706 464 LVTITSGS--NIKMGDLVYEPPRDGPTLWEIGI 494 (682)
Q Consensus 464 ~VtV~aG~--t~~lg~l~~~~~~~g~~LWeIGi 494 (682)
.|+|.+++ .+.+ ++++++. ..+|-||.+
T Consensus 399 ~v~v~~~~~~~~~~-~~~L~~~--~~~L~~v~~ 428 (435)
T 3mn8_A 399 QVRVTNDNQEALRL-DFKLAPV--ETNFDGISS 428 (435)
T ss_dssp EEEECCCSSSCEEC-CEECCBC-----------
T ss_pred EEEEecCCcceeEE-EEEEeec--CCCCCeeEe
Confidence 69999887 3356 5777554 678888864
No 5
>1uwy_A Carboxypeptidase M; metallopeptidase, GPI-anchor, metalloprotease, zinc, lipoprotein, hydrolase, structural proteomics in europe, spine; HET: NAG; 3.0A {Homo sapiens} SCOP: b.3.2.1 c.56.5.1
Probab=97.64 E-value=6e-05 Score=82.70 Aligned_cols=90 Identities=18% Similarity=0.145 Sum_probs=62.1
Q ss_pred CeEEEEEEEeccCCCccccCeeEEEecCCCCCCCcccccccceeE--EEeCCCCceEeCCccCceeEEEEEECceeeeee
Q 005706 383 RGCVSGRLLVQDSNDVISANGAYVGLAPPGDVGSWQTECKDYQFW--TTADEDGCFSIKNIRTGNYNLYAWVPGFVGDYR 460 (682)
Q Consensus 383 RGtVsG~v~~~D~~~~~pa~~a~V~L~~~~~~gs~q~~~k~yqYw--t~td~~G~FtI~nVrpGtY~L~a~~~G~~G~~~ 460 (682)
.+.|+|+|+..+| .|..+|.|.+.+ .... +.||.+|.|.+ .+.||+|+|.+...|+. .
T Consensus 295 ~~~I~G~V~D~~g---~pi~gA~V~v~g-------------~~~~~~~~Td~~G~y~~-~l~~G~Y~l~vs~~Gy~---~ 354 (426)
T 1uwy_A 295 HLGVKGQVFDQNG---NPLPNVIVEVQD-------------RKHICPYRTNKYGEYYL-LLLPGSYIINVTVPGHD---P 354 (426)
T ss_dssp GCSEEEEEECTTS---CBCCSCEEEETT-------------CCCSSCCBCCTTCEEEE-CCCSEEEEEEEECSSSC---C
T ss_pred cceeEEEEECCCC---CccCceEEEEEe-------------ccccceeEeCCCCEEEe-ccCCeeEEEEEEEcCcc---c
Confidence 5789999987655 588999999964 2223 67999999999 59999999999998864 4
Q ss_pred eeeEEEEeCCc----eeeecceEEcCCCCCCCeeEEecc
Q 005706 461 SDALVTITSGS----NIKMGDLVYEPPRDGPTLWEIGIP 495 (682)
Q Consensus 461 ~~~~VtV~aG~----t~~lg~l~~~~~~~g~~LWeIGi~ 495 (682)
++..|+|.+++ ++.+ ++++.+ +..+|-||.+-
T Consensus 355 ~~~~v~v~~~~~~~~~~~~-~~~L~~--~~~~l~evv~~ 390 (426)
T 1uwy_A 355 HITKVIIPEKSQNFSALKK-DILLPF--QGQLDSIPVSN 390 (426)
T ss_dssp EEEEEEECSSCSSSSCEEC-CEECSS--CC---------
T ss_pred EEEEEEEeCCCccccceEE-EEEEec--CCccccceeec
Confidence 45568888876 5555 577754 47788888764
No 6
>1xpn_A Hypothetical protein PA1324; B-barrel, structural genomics, northeast structural genomics consortium, NESG, protein structure initiative; NMR {Pseudomonas aeruginosa} SCOP: b.3.7.1
Probab=96.74 E-value=0.0072 Score=58.50 Aligned_cols=105 Identities=19% Similarity=0.305 Sum_probs=65.6
Q ss_pred CCCCCCCC--CCCCCCeEEEEEEEecc-CCCccccCeeEEEecCCCC-------------CCC---------cccccccc
Q 005706 370 NFPASEDF--QKSEERGCVSGRLLVQD-SNDVISANGAYVGLAPPGD-------------VGS---------WQTECKDY 424 (682)
Q Consensus 370 ~f~~s~~y--~~~~qRGtVsG~v~~~D-~~~~~pa~~a~V~L~~~~~-------------~gs---------~q~~~k~y 424 (682)
.+|+..+| ....+.++|+|++.+.. +....+..+..|.|..-.. .|- |.-+...|
T Consensus 28 ~~Fd~~e~a~~~~~G~~tI~G~a~~~~~~G~~~~~~G~~V~L~P~T~Ys~er~~~yG~~~~g~~p~~~~~~~~dp~~~~y 107 (170)
T 1xpn_A 28 PDFPEHEYAATQQVGGGVINGDLYLTSASGAIQKGTNTKVALEPATSYMKAYYAKFGNLDAAKRDPDVQPPVLDPRRATY 107 (170)
T ss_dssp CSSCCGGGGTCCCCCCCCEEEEECEECTTSCEECCTTEEEEEEECCTHHHHHHHHSSSEEGGGCCSSSCCCCCCTTHHHH
T ss_pred CCCCHHHHHHHhCCCCceEEEEEEEEcCCCCEEecCCCEEEEEeCCHHHHHHHHHhCccccccccccccccccCchhhcc
Confidence 44554443 33345689999988876 3345566677777753110 011 11122446
Q ss_pred eeEEEeCCCCceEeCCccCceeEEEEEE---Cc------eeeeeeeeeEEEEeCCceeee
Q 005706 425 QFWTTADEDGCFSIKNIRTGNYNLYAWV---PG------FVGDYRSDALVTITSGSNIKM 475 (682)
Q Consensus 425 qYwt~td~~G~FtI~nVrpGtY~L~a~~---~G------~~G~~~~~~~VtV~aG~t~~l 475 (682)
.--|.+|++|+|+|.+|+||+|=|.+.+ .. ..|... ...|+|..|++.++
T Consensus 108 ~r~t~~D~~G~F~F~~Lp~G~Yyl~a~v~w~~~~~~~~~~qgg~l-~k~Vtv~~Ge~~~v 166 (170)
T 1xpn_A 108 VREATTDQNGRFDFDHIPNGTYYISSELTWSAQSDGKTITEGGTV-TKLVTVSGSQPQKV 166 (170)
T ss_dssp CEEEEECSSCEEEECSCCSEEEEEEEEEEEEEEETTEEEEEEEEE-EEEEEECCSSCEEE
T ss_pred eeEEEecCCCcEEecCCCCccEEEEEEEeccCccccccccccceE-EEEEEeCCCcEEEE
Confidence 6678999999999999999999999842 11 112222 34599998887654
No 7
>3qec_A Putative carbohydrate binding protein; suramin binding, heparin binding, possible carbohydrate TRAN biofilm formation; HET: PGE; 2.61A {Pseudomonas aeruginosa}
Probab=96.26 E-value=0.023 Score=53.94 Aligned_cols=95 Identities=22% Similarity=0.366 Sum_probs=62.0
Q ss_pred CCCCeEEEEEEEecc-CCCccccCeeEEEecCCCC-------------CCC--------c-ccccccceeEEEeCCCCce
Q 005706 380 SEERGCVSGRLLVQD-SNDVISANGAYVGLAPPGD-------------VGS--------W-QTECKDYQFWTTADEDGCF 436 (682)
Q Consensus 380 ~~qRGtVsG~v~~~D-~~~~~pa~~a~V~L~~~~~-------------~gs--------~-q~~~k~yqYwt~td~~G~F 436 (682)
..+.++|.|++.+.. +.......+..|.|.+-.. -.. + ..+-..|..-|.+|++|+|
T Consensus 20 ~~G~~tI~G~a~~r~~~G~~~~c~g~~V~L~P~T~Y~~e~~~~~g~~~~~~r~~~~~~~~~d~~~~~y~r~t~cD~~G~F 99 (150)
T 3qec_A 20 QVGEGVINGDLYLTSASGAIQKGTNTKVALEPATSYMKAYYAKFGNLDAAKRDPDVQPPVLDPRRATYVREATTDQNGRF 99 (150)
T ss_dssp CCCCEEEEEEEEEECTTSCEEECCSCEEEEEECCHHHHHHHHHHTTCBSTTCCTTCCCCCCCTTSGGGCEEEECCTTSEE
T ss_pred CCCcceEEEEEEEECCCCCEecCCCCEEEEEeCCHHHHHHHHHhcCcccccccCCCCCCCCChhHhcceeEEEeCCCCcE
Confidence 346899999988876 2233455666677753100 000 1 1134567778999999999
Q ss_pred EeCCccCceeEEEEEEC------c---eeeeeeeeeEEEEeCCceeee
Q 005706 437 SIKNIRTGNYNLYAWVP------G---FVGDYRSDALVTITSGSNIKM 475 (682)
Q Consensus 437 tI~nVrpGtY~L~a~~~------G---~~G~~~~~~~VtV~aG~t~~l 475 (682)
+|++|+||+|-|.+.+. + ..|..... .|+|+.|++.++
T Consensus 100 ~F~~Lp~G~Yyl~a~v~w~~~~~~~~~~qgg~lmk-~V~v~ggq~~~v 146 (150)
T 3qec_A 100 DFDHIPNGTYYISSELTWSAQSDGKTITEGGTVTK-LVTVSGSQPQKV 146 (150)
T ss_dssp EEEEECSEEEEEEEEEEEEEESSSSEEEEEEEEEE-EEEESSSCCCCE
T ss_pred EECCCCCccEEEEEEEEeccCCCCCcccccceEEE-EEEEcCCcEEEE
Confidence 99999999999988642 1 12333333 499999988654
No 8
>4aw7_A GH86A beta-porphyranase; hydrolase, porphyran-hexa-oligosaccharide, complex; HET: GLA GAL L6S AAL; 1.33A {Bacteroides plebeius}
Probab=96.13 E-value=0.007 Score=68.58 Aligned_cols=72 Identities=14% Similarity=0.167 Sum_probs=53.6
Q ss_pred CCcEEEEEEEeccC--CCeEEEEEcCCCCCCCcccccccCCCCceecceeeeeeEEEEEEeeCCCeeeeecEEEEEeecC
Q 005706 585 NSSYKLRVAIASAT--LAELQVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIEGENTIFLKQPRC 662 (682)
Q Consensus 585 ~~~~tLriala~a~--~~~~~V~vN~~~~~~p~~~~~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~NtI~lt~~~g 662 (682)
.+.++|||++.-.. ...+.|.|||..+. +|.-+. +.+.. -|+ -+.-..+|+||+++|++++|+|.|+.+..
T Consensus 502 ~g~A~LRvg~gR~~g~s~~p~V~vNG~~v~--vP~~w~-g~dq~-~r~---~fFg~ieipVp~~lL~~~~NtI~VtFPD~ 574 (591)
T 4aw7_A 502 SGRASLRMSIGRPVSASKKPVVKINGTAVS--VPDNWK-GYGQS-NRN---IFFGMIEVPFDIQLLKNGDNNVDITFSDG 574 (591)
T ss_dssp SEEEEEEEEEEEETTSCSCCEEEETTEEEC--CCSCCS-SCCCT-TSS---EEEEEEEEEECGGGCCSEEEEEEEECSSC
T ss_pred CceEEEEEEcCcCCCcCCCCEEEECCEEec--cCcccc-ccccc-Chh---hceEEEEecCCHHHHhcCCCeEEEEecCC
Confidence 37899999999975 45799999998775 233332 22221 243 35668999999999998999999999875
Q ss_pred C
Q 005706 663 T 663 (682)
Q Consensus 663 s 663 (682)
.
T Consensus 575 G 575 (591)
T 4aw7_A 575 G 575 (591)
T ss_dssp C
T ss_pred C
Confidence 3
No 9
>2w87_A Esterase D, XYL-CBM35; plant cell WALL degradation, carbohydrate protein binding, xylan, CMB35, glucuronic acid, hydrolase; HET: GCU; 1.60A {Cellvibrio japonicus} PDB: 2w46_A
Probab=95.82 E-value=0.053 Score=50.27 Aligned_cols=90 Identities=11% Similarity=0.133 Sum_probs=55.6
Q ss_pred EEEEeCCCCCCCcEEEEEEEeccC--CCeEEEEEcCCCCCCCcccccccCCCCceecceeeeeeEEEEEEeeCCCeeeee
Q 005706 575 IKFKLDHVDRNSSYKLRVAIASAT--LAELQVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIEGE 652 (682)
Q Consensus 575 I~F~L~~~~~~~~~tLriala~a~--~~~~~V~vN~~~~~~p~~~~~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~ 652 (682)
|.|++.. +..|.|+|+|-.|... ...+.|.|||.... ..+..++... ++ -.|....+.|+ |++|.
T Consensus 41 v~~~V~v-~~aG~Y~l~~ryang~~~~r~~~l~VNG~~~g---~~~v~~p~Tg-----~W-~~w~t~~~~v~---L~aG~ 107 (139)
T 2w87_A 41 VVWAIDA-TSSGRRTLTIRYANGGTANRNGSLVINGGSNG---NYTVSLPTTG-----AW-TTWQTATIDVD---LVQGN 107 (139)
T ss_dssp EEEEEEE-SSCEEEEEEEEEECCSSSCCCEEEEETTTTTC---EEEECCCCCS-----ST-TCCEEEEEEEE---ECSEE
T ss_pred EEEEEEC-CCCcEEEEEEEEECCCCCCceEEEEECCEEcc---eeEEEecCCC-----CC-CccEEEEEEEE---ECCCc
Confidence 4455542 3468999999998754 46799999997541 0011222111 11 02334455555 89999
Q ss_pred cEEEEEeecCCCCCceEEEEEEEEecCC
Q 005706 653 NTIFLKQPRCTSPFQGIMYDYIRLEGPP 680 (682)
Q Consensus 653 NtI~lt~~~gss~f~~vmyD~IrLe~p~ 680 (682)
|+|+|....+. + ++-.|+|+|+.+.
T Consensus 108 ntI~l~~~~~~-g--~~niD~i~v~~~~ 132 (139)
T 2w87_A 108 NIVQLSATTAE-G--LPNIDSLSVVGGT 132 (139)
T ss_dssp EEEEEEESSTT-C--CCEEEEEEEESSS
T ss_pred eEEEEEEcCCC-C--CEEEEEEEEecCC
Confidence 99999865332 2 4678999998654
No 10
>2wz8_A Cellulosome protein dockerin type I; sugar binding protein; 1.50A {Clostridium thermocellum}
Probab=95.39 E-value=0.059 Score=51.18 Aligned_cols=87 Identities=16% Similarity=0.200 Sum_probs=54.0
Q ss_pred EEEEE-eCCCCCCCcEEEEEEEeccC------------CCeEEEEEcCCCCCCCcccccccCCCCceecceeeeeeEEEE
Q 005706 574 QIKFK-LDHVDRNSSYKLRVAIASAT------------LAELQVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYH 640 (682)
Q Consensus 574 ~I~F~-L~~~~~~~~~tLriala~a~------------~~~~~V~vN~~~~~~p~~~~~~~~~~~~i~R~~~~G~~~~~~ 640 (682)
.|.|+ +.. +..|.|+|+|-.+... ...+.|.|||.... ...++.... +- .+....
T Consensus 48 ~vtf~~V~~-~~aG~Y~l~irYang~~~~~~~y~~~~~~r~~~v~VNG~~~~-----~v~fp~Tg~-----W~-~~~~~t 115 (156)
T 2wz8_A 48 YLQFNNVYV-PQAGTYRMVVQFANAEVFGQHSYNNNVVDRYCSISVNGGPEK-----GHYFFNTRG-----WN-TYRTDI 115 (156)
T ss_dssp CEEEEEEEE-SSCEEEEEEEEEECCCBC-------CBCCEEEEEEETTCCCE-----EEEECCCSS-----TT-CCEEEE
T ss_pred EEEEEEEec-CCCcEEEEEEEEECCCcccccccCCccCcceEEEEECCceee-----EEEeCCCCC-----CC-cceEEE
Confidence 34454 433 3468999999988753 35699999996432 122322211 11 345566
Q ss_pred EEeeCCCeeeeecEEEEEeecCCCCCceEEEEEEEEe
Q 005706 641 VNIPGTRFIEGENTIFLKQPRCTSPFQGIMYDYIRLE 677 (682)
Q Consensus 641 ~~ipa~~L~~G~NtI~lt~~~gss~f~~vmyD~IrLe 677 (682)
+.|+ |++|.|+|+|+-.. .+++ +.=.|.|.|.
T Consensus 116 v~V~---L~aG~NtI~~~~~~-~~~~-~pdiD~i~v~ 147 (156)
T 2wz8_A 116 IDVY---LNAGNNTIRFYNGT-SGSY-APNIDKIAIA 147 (156)
T ss_dssp EEEE---ECSEEEEEEEECCS-TTCB-CCEEEEEEEE
T ss_pred EEEE---ECCCceEEEEEecC-CCCC-CcEEEEEEEe
Confidence 6776 99999999998541 1222 3567888875
No 11
>2w3j_A Carbohydrate binding module; sugar-binding protein, family 35, uronic acid sugars; 1.70A {Uncultured bacterium}
Probab=94.92 E-value=0.095 Score=48.95 Aligned_cols=87 Identities=22% Similarity=0.279 Sum_probs=54.3
Q ss_pred EEEEeCCCCCCCcEEEEEEEecc--CCCeEEEEEcCCCCCCCcccccccCCCCceecceeeeeeEEEEEEeeCCCeeeee
Q 005706 575 IKFKLDHVDRNSSYKLRVAIASA--TLAELQVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIEGE 652 (682)
Q Consensus 575 I~F~L~~~~~~~~~tLriala~a--~~~~~~V~vN~~~~~~p~~~~~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~ 652 (682)
|.|++.. +..|.|+|.|-.|.. ....+.|.|||.... +..++... ++. .|....+.|+ |++|.
T Consensus 41 v~~~V~v-~~aG~Y~l~~ryang~~~~r~~~l~VNG~~~~-----~v~~p~Tg-----~W~-~w~t~~~~v~---L~aG~ 105 (145)
T 2w3j_A 41 IVWSLSA-ASAKTYTAQIRFGNGGTSARRATVVVNDSQIK-----TLDFPTNS-----NWT-QWQTVNVDIP---LKAGT 105 (145)
T ss_dssp EEEEEEE-SSCEEEEEEEEEECCSSSCCCEEEEETTEEEE-----EECCCCCS-----CTT-SCEEEEEEEE---ECSEE
T ss_pred EEEEEEC-CCCeEEEEEEEEECCCCCCeEEEEEECCeEee-----EEEecCCC-----CCC-eeEEEEEEEE---ECCCc
Confidence 4455443 346899999999854 356799999996432 12222111 110 1333445554 89999
Q ss_pred cEEEEEeecCCCCCceEEEEEEEEecC
Q 005706 653 NTIFLKQPRCTSPFQGIMYDYIRLEGP 679 (682)
Q Consensus 653 NtI~lt~~~gss~f~~vmyD~IrLe~p 679 (682)
|+|+|....+. + ++-.|+|+|+..
T Consensus 106 ntI~l~~~~~~-g--~~niD~i~v~~~ 129 (145)
T 2w3j_A 106 NSIKLVAETAD-G--LANIDSIRVTGN 129 (145)
T ss_dssp EEEEEEECSTT-C--CCEEEEEEECST
T ss_pred eEEEEEEecCc-C--CEEEEEEEEEcC
Confidence 99999964332 3 477899999754
No 12
>2w47_A Lipolytic enzyme, G-D-S-L; hydrolase; HET: UNF; 1.40A {Clostridium thermocellum} PDB: 2w1w_A
Probab=94.68 E-value=0.13 Score=47.61 Aligned_cols=89 Identities=17% Similarity=0.174 Sum_probs=53.6
Q ss_pred EEEEeCCCCCCCcEEEEEEEeccC--CCeEEEEEcCCCCCCCcccccccCCCCceecceeeeeeEEEEEEeeCCCeeeee
Q 005706 575 IKFKLDHVDRNSSYKLRVAIASAT--LAELQVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIEGE 652 (682)
Q Consensus 575 I~F~L~~~~~~~~~tLriala~a~--~~~~~V~vN~~~~~~p~~~~~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~ 652 (682)
|.|++.. +..|.|+|+|-.+... ...+.|.|||.... ....++.... +. .+....+.|+ |.+|.
T Consensus 42 v~~~V~v-~~aG~Y~l~~ryan~~~~~~~~~l~VNG~~~~----~~v~~p~Tg~-----w~-~w~~~~~~v~---L~aG~ 107 (144)
T 2w47_A 42 IEWNVNA-PSSGSYALIFRYANGTTANRPMRITVNGNIVK----PSMDFVSTGA-----WT-TWNEAGIVAN---LNQGN 107 (144)
T ss_dssp EEEEEEE-SSSEEEEEEEEEECCSSSCCCEEEEETTEEEE----EEECCCCCSS-----TT-CCEEEEEEEE---ECSEE
T ss_pred EEEEEEC-CCCcEEEEEEEEECCCCCCeEEEEEECCeEee----eEEEecCCCC-----CC-eeEEEEEEEE---ECCCc
Confidence 4455543 3468899999998753 56799999996421 1112221110 10 1222234443 89999
Q ss_pred cEEEEEeecCCCCCceEEEEEEEEecCC
Q 005706 653 NTIFLKQPRCTSPFQGIMYDYIRLEGPP 680 (682)
Q Consensus 653 NtI~lt~~~gss~f~~vmyD~IrLe~p~ 680 (682)
|+|+|....+ .+ ++-.|+|+|+...
T Consensus 108 ntI~l~~~~~-~g--~~niD~i~v~~~~ 132 (144)
T 2w47_A 108 NVIRATAIAS-DG--GPNVDYLKVFSAN 132 (144)
T ss_dssp EEEEEEECST-TC--CCEEEEEEEEECT
T ss_pred cEEEEEEeCC-CC--CEEEeEEEEEeCC
Confidence 9999986432 22 5889999998543
No 13
>2bgo_A Endo-B1,4-mannanase 5C; carbohydrate binding protein, carbohydrate binding module; NMR {Cellvibrio japonicus} PDB: 2bgp_A
Probab=94.23 E-value=0.23 Score=46.58 Aligned_cols=89 Identities=9% Similarity=0.101 Sum_probs=56.6
Q ss_pred ccEEEEEEeCCCCCCCcEEEEEEEeccC-CCeEEEEEcCCCCCCCcccccccCCCCceecceeeeeeEEEEEEeeCCCee
Q 005706 571 TTWQIKFKLDHVDRNSSYKLRVAIASAT-LAELQVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFI 649 (682)
Q Consensus 571 ~~w~I~F~L~~~~~~~~~tLriala~a~-~~~~~V~vN~~~~~~p~~~~~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~ 649 (682)
..=.|.|+++. +..|.|.|.|-.+... ..+-.+.|||. .. .-.++.... .+.+. .+ -.|.
T Consensus 34 ~gdsVtf~VdV-P~tG~YdLsI~Ya~~~G~k~n~L~VNG~-~~-----~V~fP~tt~---------~~~~~-~~--V~L~ 94 (140)
T 2bgo_A 34 AGSAVIWNVDV-PVTGEYRINLTWSSPYSSKVNTLVMDGT-AL-----SYAFAEATV---------PVTYV-QT--KTLS 94 (140)
T ss_dssp TTCEEEEEECC-CSSEEEEEEEEECCCSSEEEEEEEETTE-EE-----EEEEESCCS---------CEEEE-EE--EEEC
T ss_pred CCCEEEEEEec-CCCcEEEEEEEeccCCCCceEEEEECCc-ee-----EEEECCcCC---------cEEEE-EE--EEec
Confidence 34456666654 4478999999997653 46778999996 32 122221111 11111 11 5788
Q ss_pred eeecEEEEEeecCCCCCceEEEEEEEEecCC
Q 005706 650 EGENTIFLKQPRCTSPFQGIMYDYIRLEGPP 680 (682)
Q Consensus 650 ~G~NtI~lt~~~gss~f~~vmyD~IrLe~p~ 680 (682)
+|.|+|.|.--+|+ |-.+..|+|+|+...
T Consensus 95 aG~NtI~i~~~~g~--WG~~~iD~I~l~~a~ 123 (140)
T 2bgo_A 95 AGNHSFGVRVGSSD--WGYMNVHSLKLELLG 123 (140)
T ss_dssp SSCEEEEEECCSSS--CCCCEEEEEEEEECC
T ss_pred CCccEEEEEecCCC--ceeEEEEEEEEEcCC
Confidence 99999999864443 446889999999654
No 14
>2vzp_A Aocbm35, EXO-beta-D-glucosaminidase; family 35, CSXA, glucuronic acid, hydrolase; 1.05A {Amycolatopsis orientalis} PDB: 2vzq_A* 2vzr_A*
Probab=93.29 E-value=0.28 Score=44.21 Aligned_cols=85 Identities=19% Similarity=0.209 Sum_probs=50.5
Q ss_pred EEEEeCCCCCCCcEEEEEEEeccC--CCeEEEEEcCCCCCCCcccccccCCCCceecceeeeeeEEEEEEeeCCCeeeee
Q 005706 575 IKFKLDHVDRNSSYKLRVAIASAT--LAELQVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIEGE 652 (682)
Q Consensus 575 I~F~L~~~~~~~~~tLriala~a~--~~~~~V~vN~~~~~~p~~~~~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~ 652 (682)
|.|++.. +..|.|+|+|-.|... ...+.|.|||.... ....++.. +++. .+....+.|+ |++|.
T Consensus 41 v~~~V~v-~~aG~Y~l~~rya~~~~~~~~~~l~VnG~~~~----~~v~~p~t-----g~W~-~w~~~~~~v~---L~aG~ 106 (127)
T 2vzp_A 41 VEWTVTV-PSAGTYDVVVRYANGTTTSRPLDFSVNGSISA----SGVAFGST-----GTWP-AWTTKTVRVT---LAAGV 106 (127)
T ss_dssp EEEEEEE-SSSEEEEEEEEEECCSSSCCCEEEEETTEEEE----EEECCCCC-----SSTT-CCEEEEEEEE---ECSEE
T ss_pred EEEEEEc-CCCCEEEEEEEEEcCCCCCeEEEEEECCEEee----eEEEecCC-----CCCC-ceEEEEEEEE---ECCCc
Confidence 4455433 3468899999998853 56799999996421 01122211 1111 1233344443 89999
Q ss_pred cEEEEEeecCCCCCceEEEEEEEE
Q 005706 653 NTIFLKQPRCTSPFQGIMYDYIRL 676 (682)
Q Consensus 653 NtI~lt~~~gss~f~~vmyD~IrL 676 (682)
|+|+|....+. . ++-.|+|++
T Consensus 107 ntI~l~~~~~~-~--~~niD~i~v 127 (127)
T 2vzp_A 107 NKIKAVATTAN-G--GPNVDKITL 127 (127)
T ss_dssp EEEEEEECSTT-C--CCEEEEEEC
T ss_pred eEEEEEEeCCC-C--CeEEEEEEC
Confidence 99999975432 2 467788764
No 15
>3kcp_A Cellulosomal-scaffolding protein A; dockerin, X-module, carbohydrate metabolism, cell WALL biogenesis/degradation; 1.94A {Clostridium thermocellum atcc 27405} PDB: 3p0d_C 4fl4_C 2b59_B
Probab=93.12 E-value=0.17 Score=53.41 Aligned_cols=62 Identities=21% Similarity=0.330 Sum_probs=47.9
Q ss_pred CCeEEEEEEEec----cCCCccccCeeEEEecCCCCCCCcccccccceeEEEeCCCCceEeCCccCce--eEEEEEECce
Q 005706 382 ERGCVSGRLLVQ----DSNDVISANGAYVGLAPPGDVGSWQTECKDYQFWTTADEDGCFSIKNIRTGN--YNLYAWVPGF 455 (682)
Q Consensus 382 qRGtVsG~v~~~----D~~~~~pa~~a~V~L~~~~~~gs~q~~~k~yqYwt~td~~G~FtI~nVrpGt--Y~L~a~~~G~ 455 (682)
.-++|+|-|... +.+......++.|-+.. ...-+.+|++|+|+|.+|++|+ |+|.+.++|+
T Consensus 156 ~~~~vsGYi~~~~~~~~~~~~~~~~G~~V~i~g-------------t~~sa~tD~~G~f~I~~vp~~~~~ytl~i~~~g~ 222 (321)
T 3kcp_A 156 EGYKVSGYILPDFSFDATVAPLVKAGFKVEIVG-------------TELYAVTDANGYFEITGVPANASGYTLKISRATY 222 (321)
T ss_dssp SSEEEEEEEEESSCCCTTTHHHHHSCCEEEETT-------------SSCEEECCTTSEEEEEEECCEEEEEEEEEECTEE
T ss_pred CCceEEEEEccccccccccchhccCCcEEEEEe-------------ccceeEECCCceEEEeccCCCCccEEEEEeecCc
Confidence 469999998752 11122345678888854 3357889999999999999999 9999999986
Q ss_pred e
Q 005706 456 V 456 (682)
Q Consensus 456 ~ 456 (682)
+
T Consensus 223 l 223 (321)
T 3kcp_A 223 L 223 (321)
T ss_dssp C
T ss_pred e
Confidence 5
No 16
>2xsu_A Catechol 1,2 dioxygenase; oxidoreductase; HET: PIE; 1.60A {Acinetobacter radioresistens} PDB: 2xsr_A* 2xsv_A*
Probab=90.44 E-value=0.56 Score=49.48 Aligned_cols=63 Identities=16% Similarity=0.229 Sum_probs=45.1
Q ss_pred CCeEEEEEEEeccCCCccccCeeEEEecCCCCCCCccccc---cccee--EEEeCCCCceEeCCccCceeE
Q 005706 382 ERGCVSGRLLVQDSNDVISANGAYVGLAPPGDVGSWQTEC---KDYQF--WTTADEDGCFSIKNIRTGNYN 447 (682)
Q Consensus 382 qRGtVsG~v~~~D~~~~~pa~~a~V~L~~~~~~gs~q~~~---k~yqY--wt~td~~G~FtI~nVrpGtY~ 447 (682)
++-.|+|+|...+|+ |..+|.|=+-.....|.+..+. .+... ...||++|.|.|.-|+||.|.
T Consensus 135 ~~l~v~G~V~D~~G~---Pv~gA~VeiWqada~G~Y~~~~~~~~~~~~rGr~~TD~~G~y~F~TI~Pg~Y~ 202 (312)
T 2xsu_A 135 DTLIIEGTVTDTEGN---IIEGAKVEVWHANSLGNYSFFDKSQSDFNLRRTILTDVNGKYVALTTMPVGYG 202 (312)
T ss_dssp CEEEEEEEEEETTSC---BCTTCEEEEECCCTTSCCBTTBTTSCTTTTEEEEECCTTSEEEEEEECCCCEE
T ss_pred eeEEEEEEEECCCCC---CCCCCEEEEEecCCCCcccCCCCCCCCCCCeeEEEeCCCceEEEEEECcCccc
Confidence 478999999988774 9999999985444444222110 11111 367899999999999999997
No 17
>2azq_A Catechol 1,2-dioxygenase; CTD, lipid, isozyme, intradiol, oxido; HET: PCF; 2.65A {Pseudomonas putida}
Probab=88.39 E-value=1 Score=47.51 Aligned_cols=64 Identities=16% Similarity=0.280 Sum_probs=46.2
Q ss_pred CCCeEEEEEEEeccCCCccccCeeEEEecCCCCCCCcccc---ccccee--EEEeCCCCceEeCCccCceeE
Q 005706 381 EERGCVSGRLLVQDSNDVISANGAYVGLAPPGDVGSWQTE---CKDYQF--WTTADEDGCFSIKNIRTGNYN 447 (682)
Q Consensus 381 ~qRGtVsG~v~~~D~~~~~pa~~a~V~L~~~~~~gs~q~~---~k~yqY--wt~td~~G~FtI~nVrpGtY~ 447 (682)
.++=.|.|+|...+| .|..+|.|=+-.....|.+..+ ..+... ...||++|.|+|.-|+||-|.
T Consensus 130 G~~l~v~G~V~D~~G---~Pv~gA~VeiWqada~G~Y~~~~~~~~~f~~rGr~~TD~~G~y~F~TI~Pg~Y~ 198 (311)
T 2azq_A 130 GVVMFLQGQVFDANG---KPLAGATVDLWHANTQGTYSYFDSTQSEFNLRRRIITDAEGRYRARSIVPSGYG 198 (311)
T ss_dssp CCEEEEEEEEECSSS---CBCTTCEEEEECCCTTSCCBTTBTTSCTTTTEEEEECCTTCEEEEEEECCCCEE
T ss_pred CcEEEEEEEEEcCCC---CCCCCceeEEEecCCCCccCCCCCCCCCCCCeeEEEeCCCceEEEEEEcCCCcC
Confidence 467899999998777 4999999999554444433211 011222 367899999999999999997
No 18
>2boy_A 3-chlorocatechol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: BHO LPP; 1.9A {Rhodococcus opacus}
Probab=88.36 E-value=0.55 Score=48.17 Aligned_cols=65 Identities=17% Similarity=0.306 Sum_probs=46.1
Q ss_pred CCCeEEEEEEEeccCCCccccCeeEEEecCCCCCCCccccc---ccce-e-EEEeCCCCceEeCCccCceeEE
Q 005706 381 EERGCVSGRLLVQDSNDVISANGAYVGLAPPGDVGSWQTEC---KDYQ-F-WTTADEDGCFSIKNIRTGNYNL 448 (682)
Q Consensus 381 ~qRGtVsG~v~~~D~~~~~pa~~a~V~L~~~~~~gs~q~~~---k~yq-Y-wt~td~~G~FtI~nVrpGtY~L 448 (682)
.++-.|.|+|...+| .|..+|.|=+-.....|.+..+. .+.. . ...||++|.|+|.-|+||.|.+
T Consensus 100 G~~l~l~G~V~D~~G---~Pv~~A~VeiWqada~G~Y~~~~~~~~~~~~rGr~~Td~~G~y~F~TI~Pg~Y~~ 169 (254)
T 2boy_A 100 GDTLIFRGEVVDQEG---APLADVLLDMWQADAAGEYSFINPTLPDYLFRGKIRTDENGRFTLRTIVPAPYEI 169 (254)
T ss_dssp SCEEEEEEEEECTTS---CBCCSCEEEEECCCTTSCCBTTBTTSCTTTTEEEEECCTTSEEEEEEECCCCEEC
T ss_pred CCEEEEEEEEECCCC---CCCCCCEEEEEcCCCCCccCCcCCCCCCCCCeeEEEeCCCceEEEEEECCccccC
Confidence 568899999998777 49999999995444444222110 0111 1 2678999999999999999964
No 19
>2cdp_A Beta-agarase 1; carbohydrate-binding module, hydrolase; HET: GAL AAL; 1.59A {Saccharophagus degradans} PDB: 2cdo_A*
Probab=88.13 E-value=1 Score=42.68 Aligned_cols=82 Identities=13% Similarity=0.112 Sum_probs=47.5
Q ss_pred CCCcEEEEEEEeccC-CCeEEEEEcCCCCCCCcccccccCCCCceecceeeeeeEEEEEEeeCCCeeeeecEEEEEeecC
Q 005706 584 RNSSYKLRVAIASAT-LAELQVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIEGENTIFLKQPRC 662 (682)
Q Consensus 584 ~~~~~tLriala~a~-~~~~~V~vN~~~~~~p~~~~~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~NtI~lt~~~g 662 (682)
..|.|+|.+-.|+.. ++.++|+|||.... +....-.++. .++ -.|... +...=.|.+|.|+|+|....+
T Consensus 77 ~aG~Y~i~~rvas~~~g~~i~l~vdg~~~~-~~~g~~~vp~------tGW-~~w~t~--t~~~v~L~aG~htL~l~~~g~ 146 (160)
T 2cdp_A 77 QAGNYTISYQAGSGVTGGSIEFLVNENGSW-ASKTVTAVPN------QGW-DNFQPL--NGGSVYLSAGTHQVRLHGAGS 146 (160)
T ss_dssp SCEEEEEEEEEEBSSSSCEEEEEEECSSSE-EEEEEEECCB------SCT-TCCEEE--EEEEEEECSEEEEEEEEECSS
T ss_pred CCcEEEEEEEEEcCCCCceEEEEECCCCCc-eeeeEEEcCC------CCC-ceeEEe--eeeEEEeCCCeEEEEEEEECC
Confidence 368899988888864 67899999995210 0111111111 111 112222 221234679999999997654
Q ss_pred CCCCceEEEEEEEEe
Q 005706 663 TSPFQGIMYDYIRLE 677 (682)
Q Consensus 663 ss~f~~vmyD~IrLe 677 (682)
++. ++-.|.|+|.
T Consensus 147 ~~~--~~Nld~~~f~ 159 (160)
T 2cdp_A 147 NNW--QWNLDKFTLS 159 (160)
T ss_dssp SSB--CCEEEEEEEE
T ss_pred CCC--cEEEEEEEEE
Confidence 322 4678988885
No 20
>1uxz_A Cellulase B; carbohydrate binding module, CBM6, mixted BETA1, 3-1, 4 linked glucan; 1.4A {Cellvibrio mixtus} SCOP: b.18.1.10 PDB: 1uy0_A* 1uyx_A* 1uyy_A* 1uyz_A* 1uz0_A*
Probab=86.70 E-value=2.6 Score=38.25 Aligned_cols=77 Identities=18% Similarity=0.246 Sum_probs=49.2
Q ss_pred CCcEEEEEEEeccC-CCeEEEEEcCCCCCCCcccccccCCCCceecceeeeeeEEEEEEeeCCCeeeeecEEEEEeecCC
Q 005706 585 NSSYKLRVAIASAT-LAELQVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIEGENTIFLKQPRCT 663 (682)
Q Consensus 585 ~~~~tLriala~a~-~~~~~V~vN~~~~~~p~~~~~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~NtI~lt~~~gs 663 (682)
.+.|+|.+-.|+.. +++++|++++ . . ++..+-.++... +. -.|...+.+|+ |.+|.|+|+|....+
T Consensus 52 ~G~y~~~~rvas~~~gg~i~v~~~~-~-g-~~~g~~~vp~Tg-----gw-~~w~t~~~~v~---l~~G~h~l~l~~~~g- 118 (131)
T 1uxz_A 52 SGSYLIEYRVASQNGGGSLTFEEAG-G-A-PVHGTIAIPATG-----GW-QTWTTIQHTVN---LSAGSHQFGIKANAG- 118 (131)
T ss_dssp SEEEEEEEEEEESSCCEEEEEEETT-S-C-SEEEEEEECCCS-----EE-EEEEEEEEEEE---ECSEEECEEEEEEEC-
T ss_pred CCceEEEEEEECCCCCcEEEEEECC-C-C-CEeeEEEeCCCC-----CC-cccEEEEEEEE---eCCCeEEEEEEEcCC-
Confidence 57788888887764 6899999986 2 2 222233333221 11 12444455553 679999999998754
Q ss_pred CCCceEEEEEEEEec
Q 005706 664 SPFQGIMYDYIRLEG 678 (682)
Q Consensus 664 s~f~~vmyD~IrLe~ 678 (682)
++-.|.|+|+.
T Consensus 119 ----~~nld~~~f~~ 129 (131)
T 1uxz_A 119 ----GWNLNWIRINK 129 (131)
T ss_dssp ----CCEEEEEEEEE
T ss_pred ----CEEEEEEEEEE
Confidence 47889988863
No 21
>3t63_M 3,4-PCD, protocatechuate 3,4-dioxygenase beta chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 3mi1_M* 3mv4_M* 3mi5_M* 3mfl_M* 3mv6_M* 3t67_M 3pca_M* 3pcb_M* 2pcd_M* 3pce_M* 3pcf_M* 3pcc_M* 3pch_M* 3pci_M* 3pcj_M* 3pck_M* 3pcl_M* 3pcm_M* 3pcn_M* 3pcg_M ...
Probab=86.45 E-value=0.98 Score=45.88 Aligned_cols=67 Identities=21% Similarity=0.301 Sum_probs=47.9
Q ss_pred CCCCCeEEEEEEEeccCCCccccCeeEEEecCCCCCCCccccc--------ccceeE--EEeCCCCceEeCCccCceeEE
Q 005706 379 KSEERGCVSGRLLVQDSNDVISANGAYVGLAPPGDVGSWQTEC--------KDYQFW--TTADEDGCFSIKNIRTGNYNL 448 (682)
Q Consensus 379 ~~~qRGtVsG~v~~~D~~~~~pa~~a~V~L~~~~~~gs~q~~~--------k~yqYw--t~td~~G~FtI~nVrpGtY~L 448 (682)
+..++=.|.|+|...+|+ |..+|.|=+-.....|.+..+. .+...+ ..||++|.|+|.-|+||-|..
T Consensus 73 ~~G~~i~l~G~V~D~~G~---Pv~~A~VEiWqada~G~Y~~~~d~~~~~~~~~f~~rGr~~TD~~G~y~F~TI~Pg~Yp~ 149 (238)
T 3t63_M 73 PIGERIIVAGRVVDQYGK---PVPNTLVEMWQANAGGRYRHKNDRYLAPLDPNFGGVGRCLTDSDGYYSFRTIKPGPAPW 149 (238)
T ss_dssp CSSCEEEEEEEEEETTSC---BCTTCEEEEEECCTTSCCSSTTCCCSSCCCTTCCCEEEEECCTTSEEEEEEECCCCEEE
T ss_pred CCCcEEEEEEEEECCCCC---CCCCCEEEEEecCCCCCCCCccccccccCCCCcCceeEEEECCCceEEEEEECCcCccC
Confidence 445788999999987774 8999999885544445332111 112223 578999999999999999975
No 22
>3th1_A Chlorocatechol 1,2-dioxygenase; catechol 1,2-dioxygenase family, oxidoreductase, iron bindin; HET: 3PH GOL; 3.40A {Pseudomonas putida}
Probab=86.31 E-value=0.72 Score=47.45 Aligned_cols=64 Identities=11% Similarity=0.176 Sum_probs=45.0
Q ss_pred CCeEEEEEEEeccCCCccccCeeEEEecCCCCCCCccc--cc-cccee--EEEeCCCCceEeCCccCceeEE
Q 005706 382 ERGCVSGRLLVQDSNDVISANGAYVGLAPPGDVGSWQT--EC-KDYQF--WTTADEDGCFSIKNIRTGNYNL 448 (682)
Q Consensus 382 qRGtVsG~v~~~D~~~~~pa~~a~V~L~~~~~~gs~q~--~~-k~yqY--wt~td~~G~FtI~nVrpGtY~L 448 (682)
++=.|+|+|...+|+ |..+|.|=+-.....|-+.. ++ ....+ ...||++|.|.|.-|+||-|-+
T Consensus 98 ~pl~v~G~V~D~~G~---Pv~gA~VeiWqad~~G~Y~~~~~~~~~~~~RG~~~TD~~G~y~F~TI~P~~Ypi 166 (260)
T 3th1_A 98 KPLIIRGTVRSDTGE---LLAGAVIDVWHSTPDGLYSGIHDNIPVDYYRGKLVTDSQGNYRVRTTMPVPYQI 166 (260)
T ss_dssp CEEEEEEEEEETTSC---BCSSCEEEEEECCTTSCCTTTSTTCCTTBTEEEEECCTTSEEEEEEECCCCEEC
T ss_pred CEEEEEEEEECCCCC---CcCCcEEEEEecCCCCcccCcCCCCCCCCCceEEEeCCCCEEEEEEECCCCCCC
Confidence 467899999987774 99999998854444442221 11 11122 3668999999999999999853
No 23
>2bum_B Protocatechuate 3,4-dioxygenase beta chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_B 1eoa_B 1eob_B* 1eoc_B* 1eo9_B 2buq_B 2bur_B* 2bux_B 2buy_B 2buz_B* 2bv0_B* 2buu_B* 2but_B* 2buv_B* 2buw_B*
Probab=86.28 E-value=1.4 Score=44.77 Aligned_cols=65 Identities=23% Similarity=0.336 Sum_probs=47.5
Q ss_pred CCCeEEEEEEEeccCCCccccCeeEEEecCCCCCCCccccc------cccee----EEEeCCCCceEeCCccCceeEE
Q 005706 381 EERGCVSGRLLVQDSNDVISANGAYVGLAPPGDVGSWQTEC------KDYQF----WTTADEDGCFSIKNIRTGNYNL 448 (682)
Q Consensus 381 ~qRGtVsG~v~~~D~~~~~pa~~a~V~L~~~~~~gs~q~~~------k~yqY----wt~td~~G~FtI~nVrpGtY~L 448 (682)
.++=.|.|+|...+| .|..+|.|=+-.....|.+..+. .+..| ...||++|.|+|.-|+||-|..
T Consensus 76 G~~i~v~G~V~D~~G---~Pv~~A~VeiWqada~G~Y~~~~~~~~~~~~~~f~~rGr~~TD~~G~y~F~TI~Pg~Yp~ 150 (241)
T 2bum_B 76 GERVIVHGYVRDQFG---RPVKNALVEVWQANASGRYRHPNDQYIGAMDPNFGGCGRMLTDDNGYYVFRTIKPGPYPW 150 (241)
T ss_dssp SCEEEEEEEEEETTS---CBCCSCEEEEECCCTTSCCSSTTCCCSSCCCTTCCCEEEEECCTTSEEEEEEECCCCEEE
T ss_pred CcEEEEEEEEECCCC---CCCCCcEEEEEecCCCceeCCCCCCcccccCCCccceeEEEeCCCceEEEEEecCCcccc
Confidence 457799999998777 49999999986555555332211 11223 2567999999999999999975
No 24
>1tmx_A Hydroxyquinol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: HGX; 1.75A {Pimelobacter simplex}
Probab=84.35 E-value=1.1 Score=46.75 Aligned_cols=65 Identities=18% Similarity=0.230 Sum_probs=47.2
Q ss_pred CCCeEEEEEEEeccCCCccccCeeEEEecCCCCCCCcccccc--cceeE--EEeCCCCceEeCCccCceeEE
Q 005706 381 EERGCVSGRLLVQDSNDVISANGAYVGLAPPGDVGSWQTECK--DYQFW--TTADEDGCFSIKNIRTGNYNL 448 (682)
Q Consensus 381 ~qRGtVsG~v~~~D~~~~~pa~~a~V~L~~~~~~gs~q~~~k--~yqYw--t~td~~G~FtI~nVrpGtY~L 448 (682)
.++=.|.|+|...+|+ |..+|.|=+-.....|.+..+.. +..++ ..||++|.|+|.-|+||-|.+
T Consensus 131 G~~l~v~G~V~D~~G~---Pv~~A~VEiWqada~G~Y~~~~~~~~~~~rGr~~TD~~G~y~F~TI~Pg~Yp~ 199 (293)
T 1tmx_A 131 GEPCWVEGTVTDTDGN---PVPDARIEVWEADDDGFYDVQYDDDRTAARAHLLSGPDGGYAFWAITPTPYPI 199 (293)
T ss_dssp SCEEEEEEEEEETTSC---BCTTCEEEEECCCTTSCCGGGSSSCCCCSEEEEECCTTSEEEEEEECCCCEEC
T ss_pred CCEEEEEEEEECCCCC---CCCCceeEEEecCCCCcccCCccCCCCCceeEEEeCCCceEEEEEECCCcccC
Confidence 4678999999987774 99999999955544443322111 23334 567999999999999999964
No 25
>2bum_A Protocatechuate 3,4-dioxygenase alpha chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_A 1eob_A* 1eoc_A* 1eoa_A 2buq_A 2bur_A* 2but_A 2buu_A* 2buv_A* 2buw_A* 1eo9_A 2bux_A 2buy_A 2buz_A* 2bv0_A*
Probab=83.71 E-value=1.5 Score=43.73 Aligned_cols=64 Identities=17% Similarity=0.274 Sum_probs=46.0
Q ss_pred CCCeEEEEEEEeccCCCccccCeeEEEecCCCCCCCcccccc------ccee----EEEe-CCCCceEeCCccCceeE
Q 005706 381 EERGCVSGRLLVQDSNDVISANGAYVGLAPPGDVGSWQTECK------DYQF----WTTA-DEDGCFSIKNIRTGNYN 447 (682)
Q Consensus 381 ~qRGtVsG~v~~~D~~~~~pa~~a~V~L~~~~~~gs~q~~~k------~yqY----wt~t-d~~G~FtI~nVrpGtY~ 447 (682)
.++=.|.|+|...+| .|..+|.|=+-.....|....+.. +..| ...| |++|.|+|.-|+||-|.
T Consensus 50 G~~l~v~G~V~D~~G---~Pv~~A~VeiWqada~G~Y~~~~~~~~~~~~~~f~~rGr~~T~d~~G~y~F~TI~Pg~yp 124 (209)
T 2bum_A 50 GQRIRLEGQVFDGLG---LPLRDVLIEIWQADTNGVYPSQADTQGKQVDPNFLGWGRTGADFGTGFWSFNTIKPGAVP 124 (209)
T ss_dssp SCEEEEEECEECTTS---CBCSSCEEEEECCCTTSCCSSTTCCSCSCCCTTCCCEEEEECCTTTCCEEEEEECCCCCB
T ss_pred CCEEEEEEEEECCCC---CCCCCCEEEEEecCCCCcccCccCCcccccCCCccceeEEeeeCCCcEEEEEEEccCccc
Confidence 456799999997766 499999999865555553322111 2233 2567 99999999999999986
No 26
>1dmh_A 1,2-CTD, catechol 1,2-dioxygenase; aromatic hydrocarbon degradation, alpha/beta FO metalloenzyme, substrate, oxidoreductase; HET: LIO; 1.70A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1dlq_A* 1dlm_A* 1dlt_A*
Probab=82.72 E-value=1.1 Score=47.21 Aligned_cols=63 Identities=16% Similarity=0.257 Sum_probs=44.5
Q ss_pred CeEEEEEEEeccCCCccccCeeEEEecCCCCCCCccccc-----ccceeE--EEeCCCCceEeCCccCceeEE
Q 005706 383 RGCVSGRLLVQDSNDVISANGAYVGLAPPGDVGSWQTEC-----KDYQFW--TTADEDGCFSIKNIRTGNYNL 448 (682)
Q Consensus 383 RGtVsG~v~~~D~~~~~pa~~a~V~L~~~~~~gs~q~~~-----k~yqYw--t~td~~G~FtI~nVrpGtY~L 448 (682)
+=.|.|+|...+| .|..+|.|=+-.....|.+..+. .+...+ ..||++|.|+|.-|+||-|.+
T Consensus 133 ~l~l~G~V~D~~G---~Pv~~A~VeiWqada~G~Ys~~~~~~~~~~~~~RGr~~TD~~G~y~F~TI~Pg~Yp~ 202 (311)
T 1dmh_A 133 TLILHGTIFDADG---KPLPNAKVEIWHANTKGFYSHFDPTGEQQAFNMRRSIITDENGQYRVRTILPAGYGC 202 (311)
T ss_dssp EEEEEEEEECTTS---CBCTTCEEEEEECCTTSCCTTSCTTSCCSTTTTEEEEECCTTSEEEEEEECCCCEEC
T ss_pred eEEEEEEEEcCCC---CCCCCcEEEEEccCCCcccCCcCCcccCCCCCCeeEEEeCCCceEEEEEEcCCcccC
Confidence 5789999998777 48999999885444444332111 112222 668999999999999999964
No 27
>3n9t_A PNPC; phospholipid binds, N-terminal helix tunnel, oxidoreductase; HET: HGX FLC; 2.00A {Pseudomonas putida}
Probab=82.68 E-value=1.4 Score=45.92 Aligned_cols=66 Identities=23% Similarity=0.312 Sum_probs=47.7
Q ss_pred CCCCeEEEEEEEeccCCCccccCeeEEEecCCCCCCCcccc---cccceeE--EEeCCCCceEeCCccCceeEE
Q 005706 380 SEERGCVSGRLLVQDSNDVISANGAYVGLAPPGDVGSWQTE---CKDYQFW--TTADEDGCFSIKNIRTGNYNL 448 (682)
Q Consensus 380 ~~qRGtVsG~v~~~D~~~~~pa~~a~V~L~~~~~~gs~q~~---~k~yqYw--t~td~~G~FtI~nVrpGtY~L 448 (682)
..++=.|.|+|...+| .|..+|.|=+-.....|.+..+ ..+...+ ..||++|.|+|.-|+||-|..
T Consensus 126 ~G~~l~l~G~V~D~~G---~Pv~~A~VeiWqada~G~Y~~~~~~~~~~~lRGr~~TD~~G~y~F~TI~Pg~Yp~ 196 (290)
T 3n9t_A 126 DGVPALVYGRVLDVQG---RPVVGAVLDVWQTADNGMYSGQDPDQPFGNLRGRYRSDNDGCFAIQTTVPVCYPI 196 (290)
T ss_dssp CSCEEEEEEEEEETTS---CBCSSCEEEEECCCTTSCCTTTSTTSCTTTTEEEEECCTTSEEEEEEECCCCEEC
T ss_pred CCCeEEEEEEEECCCC---CCCCCCEEEEEccCCCCCcCCCCCCCCCCCceeEEEeCCCceEEEEEeCCCCcCC
Confidence 3457899999998777 4999999988655555533311 1122233 578999999999999999975
No 28
>2y8k_A Arabinoxylanase, carbohydrate binding family 6; hydrolase; 1.47A {Clostridium thermocellum}
Probab=81.74 E-value=6.3 Score=43.42 Aligned_cols=87 Identities=11% Similarity=0.175 Sum_probs=54.4
Q ss_pred EEEEeCCCCCCCcEEEEEEEeccCCCeEEEEEcCCCCCCCcccccccCCCCceecceeeeeeEEEEEEeeCCCeeeeecE
Q 005706 575 IKFKLDHVDRNSSYKLRVAIASATLAELQVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIEGENT 654 (682)
Q Consensus 575 I~F~L~~~~~~~~~tLriala~a~~~~~~V~vN~~~~~~p~~~~~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~Nt 654 (682)
|.|++.. ...|.|+|.+-.|+..++.++|+||+.... .+-.++.. ++. -.|...+.+|. |.+|.|+
T Consensus 398 ~~y~v~~-~~~G~y~~~~rvas~~gg~i~v~~d~~~~~----g~~~vp~T-----ggw-~~w~t~~~~v~---l~~G~~~ 463 (491)
T 2y8k_A 398 LEYTIRV-RNPGYYNLSLRVAGISGSRVQVSFGNQDKT----GVWELPAT-----GGF-QTWTTATRQVF---LGAGLQK 463 (491)
T ss_dssp EEEEEEE-SSCEEEEEEEEEEECTTCEEEEEETTEESS----CSEECCCC-----SEE-EEEEEEEEEEE---ECSEEEE
T ss_pred EEEEEec-CCCccEEEEEEEEcCCCceEEEEECCccce----eEEEeCCC-----CCC-cccEEEEEEEE---eCCcEEE
Confidence 3455432 235788888888886788999999995321 11112211 111 12444555553 7899999
Q ss_pred EEEEeecCCCCCceEEEEEEEEecCC
Q 005706 655 IFLKQPRCTSPFQGIMYDYIRLEGPP 680 (682)
Q Consensus 655 I~lt~~~gss~f~~vmyD~IrLe~p~ 680 (682)
|+|+...| ++-.|.|+|+..+
T Consensus 464 l~l~~~~g-----~~nld~~~f~~~~ 484 (491)
T 2y8k_A 464 LRINALSG-----GFNLNWIELSPIL 484 (491)
T ss_dssp EEEEESSS-----SEEEEEEEEEEC-
T ss_pred EEEEEecC-----CEEEEEEEEecCC
Confidence 99997654 4888999998543
No 29
>3t63_A 3,4-PCD, protocatechuate 3,4-dioxygenase alpha chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 1ykl_A* 1ykm_A* 1ykn_A* 1yko_A* 1ykp_A* 2pcd_A 1ykk_A* 3lmx_A* 3lxv_A* 3mfl_A* 3mi1_A* 3mi5_A* 3lkt_A* 3mv6_A* 3pca_A* 3pcb_A* 3pcc_A* 3pcd_A 3pce_A* 3pcf_A* ...
Probab=81.40 E-value=1.6 Score=43.26 Aligned_cols=65 Identities=14% Similarity=0.270 Sum_probs=45.5
Q ss_pred CCCeEEEEEEEeccCCCccccCeeEEEecCCCCCCCccccc---ccceeE--EEeCCC-CceEeCCccCceeEE
Q 005706 381 EERGCVSGRLLVQDSNDVISANGAYVGLAPPGDVGSWQTEC---KDYQFW--TTADED-GCFSIKNIRTGNYNL 448 (682)
Q Consensus 381 ~qRGtVsG~v~~~D~~~~~pa~~a~V~L~~~~~~gs~q~~~---k~yqYw--t~td~~-G~FtI~nVrpGtY~L 448 (682)
.++=.|.|+|...+| .|..+|.|=+-.....|....+. .+...+ ..||++ |.|+|.-|+||-|..
T Consensus 46 G~~l~v~G~V~D~~G---~Pv~~A~VeiWqada~G~Y~~~~~~~~~f~~rGr~~TD~~~G~~~F~TI~Pg~Y~~ 116 (200)
T 3t63_A 46 GEHILLLGQVYDGNG---HLVRDSFLEVWQADANGEYQDAYNLENAFNSFGRTATTFDAGEWTLHTVKPGVVNN 116 (200)
T ss_dssp SCEEEEEECEECTTS---CBCSSCEEEEEECCTTSCCCCBCCTTSSBCSEEEEECCSSCCSEEEEEECCCCEEC
T ss_pred CCEEEEEEEEECCCC---CCCCCCEEEEEccCCCCCcCCCCCCCCCccccceEecCCCCCEEEEEEECCcCcCC
Confidence 357899999997776 49999999884444444222111 112233 568998 999999999999974
No 30
>3hhy_A 1,2-CTD, catechol 1,2-dioxygenase; beta-sandwich, aromatic hydrocarbons catabolism, dioxygenase metal-binding, oxidoreductase; HET: 6PL; 1.55A {Rhodococcus opacus} PDB: 3hhx_A* 3hgi_A* 3hj8_A* 3hjq_A* 3hjs_A* 3i4v_A* 3hkp_A* 3i51_A* 3i4y_A*
Probab=81.23 E-value=1.5 Score=45.62 Aligned_cols=63 Identities=24% Similarity=0.344 Sum_probs=44.7
Q ss_pred CeEEEEEEEeccCCCccccCeeEEEecCCCCCCCccccc---cccee--EEEeCCCCceEeCCccCceeEE
Q 005706 383 RGCVSGRLLVQDSNDVISANGAYVGLAPPGDVGSWQTEC---KDYQF--WTTADEDGCFSIKNIRTGNYNL 448 (682)
Q Consensus 383 RGtVsG~v~~~D~~~~~pa~~a~V~L~~~~~~gs~q~~~---k~yqY--wt~td~~G~FtI~nVrpGtY~L 448 (682)
+=.|.|+|...+| .|..+|.|=+-.....|.+..+. .+... ...||++|.|.|.-|+||-|-+
T Consensus 131 pl~l~G~V~D~~G---~Pv~~A~VeiWqada~G~Ys~~~~~~~~~~lRGr~~TD~dG~y~F~TI~Pg~Yp~ 198 (280)
T 3hhy_A 131 PLVFSGQVTDLDG---NGLAGAKVELWHADNDGYYSQFAPHLPEWNLRGTIIADEEGRYEITTIQPAPYQI 198 (280)
T ss_dssp EEEEEEEEECTTS---CBCSSCEEEEECCCTTSCCTTSSTTSCTTTTEEEEECCTTSEEEEEEECCCCEEC
T ss_pred EEEEEEEEECCCC---CCCCCcEEEEEecCCCCCCCCCCCCCCCCcceEEEEeCCCceEEEEEECCcCcCC
Confidence 5589999998776 49999999885544445332211 11222 3578999999999999999963
No 31
>2h4e_A Transthyretin; amyloid, sulfite, familial amyloidotic polyne transport protein; HET: CSU; 1.45A {Homo sapiens} SCOP: b.3.4.1 PDB: 2wqa_A* 1zcr_A 1zd6_A 2trh_A 1bz8_A 2qpf_A 1tfp_A
Probab=79.76 E-value=2.4 Score=39.08 Aligned_cols=63 Identities=13% Similarity=0.068 Sum_probs=43.1
Q ss_pred CCeEEEEEEEecc-CCCccccCeeEEEecCCCCCCCcccccccceeEEEeCCCCceE----eCCccCceeEEEEEE
Q 005706 382 ERGCVSGRLLVQD-SNDVISANGAYVGLAPPGDVGSWQTECKDYQFWTTADEDGCFS----IKNIRTGNYNLYAWV 452 (682)
Q Consensus 382 qRGtVsG~v~~~D-~~~~~pa~~a~V~L~~~~~~gs~q~~~k~yqYwt~td~~G~Ft----I~nVrpGtY~L~a~~ 452 (682)
.++.|+=+|+... | .||.++.|-|......++|+ .-.-..||++|+.. -..+.+|.|+|..-.
T Consensus 8 ~~~~LStHVLDt~~G---~PAagv~V~L~~~~~~~~w~-----~l~~~~Tn~DGR~~~ll~~~~~~~G~Y~L~F~t 75 (127)
T 2h4e_A 8 SKXPLMVKVLDAVRG---SPAINVAVHVFRKAADDTWE-----PFASGKTSESGELHGLTTEEEFVEGIYKVEIDT 75 (127)
T ss_dssp --CCEEEEEEETTTT---EECTTCEEEEEEECTTSCEE-----EEEEEECCTTSEECCSCCTTTCCSEEEEEEECH
T ss_pred CcCCEEEEEecCCCc---CCCCCCEEEEEEeCCCCCeE-----EEEEeecCCCccccCcCCCCCccceEEEEEEEh
Confidence 4677888877544 5 69999999996422122354 33456799999872 345889999999864
No 32
>3o5u_A Chlorocatechol 1,2-dioxygenase; beta barrel,oxidoreductase, oxidoreductase; HET: MYY DHB; 2.35A {Rhodococcus opacus} PDB: 3o32_A* 1s9a_A* 3o6j_A* 3o6r_A*
Probab=78.17 E-value=2.7 Score=43.12 Aligned_cols=63 Identities=19% Similarity=0.299 Sum_probs=45.3
Q ss_pred CCeEEEEEEEeccCCCccccCeeEEEecCCCCCCCcccc----cccceeE--EEeCCCCceEeCCccCceeE
Q 005706 382 ERGCVSGRLLVQDSNDVISANGAYVGLAPPGDVGSWQTE----CKDYQFW--TTADEDGCFSIKNIRTGNYN 447 (682)
Q Consensus 382 qRGtVsG~v~~~D~~~~~pa~~a~V~L~~~~~~gs~q~~----~k~yqYw--t~td~~G~FtI~nVrpGtY~ 447 (682)
++=.|.|+|...+| .|..+|.|=+-.....|.+..+ ......+ ..||++|.|+|.-|+||-|-
T Consensus 102 ~~l~l~G~V~D~~G---~Pv~~A~VeiWqada~G~Ys~~~~~~~~~~~~RGr~~TD~~G~y~F~TI~Pg~Yp 170 (257)
T 3o5u_A 102 DRMRFTGSVRDTSG---TPITGAVIDVWHSTNDGNYSFFSPALPDQYLLRGRVVPAEDGSIEFHSIRPVPYE 170 (257)
T ss_dssp CEEEEEEEEECTTC---CBCTTCEEEEECCCTTSCCTTSCTTSCSSCTTEEEECCCTTSEEEEEEECCCCEE
T ss_pred CEEEEEEEEECCCC---CCCCCcEEEEEecCCCCCCCCcCCCCCcccCceeEEEeCCCceEEEEEECCCCcC
Confidence 56899999997776 4999999988655555533211 1112233 56899999999999999995
No 33
>1ti6_B Pyrogallol hydroxytransferase small subunit; molybdenum binding enzyme, MGD-cofactors, DMSO-reductase family, 4Fe-4S-cluster; HET: MGD BTT; 2.00A {Pelobacter acidigallici} SCOP: b.3.5.1 d.58.1.5 PDB: 1ti2_B* 1ti4_B* 1vld_N* 1vle_N* 1vlf_N*
Probab=78.16 E-value=2.7 Score=43.28 Aligned_cols=48 Identities=17% Similarity=0.257 Sum_probs=39.2
Q ss_pred EEeCCCCceEeCCccCceeEEEEEECceeeeeeeeeEEEEeCCceeeecceEE
Q 005706 428 TTADEDGCFSIKNIRTGNYNLYAWVPGFVGDYRSDALVTITSGSNIKMGDLVY 480 (682)
Q Consensus 428 t~td~~G~FtI~nVrpGtY~L~a~~~G~~G~~~~~~~VtV~aG~t~~lg~l~~ 480 (682)
+.+|+-|.|-+..+.+|.|+|.+.+.|+ ....++.| .|+.+.||++.+
T Consensus 227 ~~~d~~G~f~~~~l~~G~y~v~v~a~g~----p~~~~~~~-~~~~~~lg~v~l 274 (274)
T 1ti6_B 227 AETNFFGEFKFDALDNGEYTVEIDADGK----SYSDTVVI-DDKSVDLGFIKL 274 (274)
T ss_dssp EECCTTSEEEEEEECSEEEEEEEEETTE----EEEEEEEE-SSSCEEEEEEEC
T ss_pred EeecCcCcEEEeccCCcceEEEEecCCC----CccceeEE-ccCccccceeeC
Confidence 5678999999999999999999999764 34556888 777778987753
No 34
>2g2n_A Transthyretin-like protein; transthyretin-related protein, unknown functi; 1.65A {Escherichia coli} PDB: 2g2p_A 2igl_A 2gpz_A
Probab=77.78 E-value=3.2 Score=37.54 Aligned_cols=62 Identities=23% Similarity=0.297 Sum_probs=41.6
Q ss_pred CCeEEEEEEEecc-CCCccccCeeEEEecCCCCCCCcccccccceeEEEeCCCCceE----eCCccCceeEEEEEE
Q 005706 382 ERGCVSGRLLVQD-SNDVISANGAYVGLAPPGDVGSWQTECKDYQFWTTADEDGCFS----IKNIRTGNYNLYAWV 452 (682)
Q Consensus 382 qRGtVsG~v~~~D-~~~~~pa~~a~V~L~~~~~~gs~q~~~k~yqYwt~td~~G~Ft----I~nVrpGtY~L~a~~ 452 (682)
+|+.|+=+|+... | .||.++.|-|..... +.|+ .---..||+||+.. -..+.+|.|+|..-.
T Consensus 2 ~~~~lstHVLDt~~G---~PAagv~V~L~~~~~-~~~~-----~l~~~~Tn~DGR~~~l~~~~~~~~G~Y~l~F~t 68 (114)
T 2g2n_A 2 QQNILSVHILNQQTG---KPAADVTVTLEKKAD-NGWL-----QLNTAKTDKDGRIKALWPEQTATTGDYRVVFKT 68 (114)
T ss_dssp --CCEEEEEEETTTT---EECCSCEEEEEEECS-SSEE-----EEEEEECCTTSEESCCSCSSCCCSEEEEEEECH
T ss_pred CCCCeEEEEecCCCc---CCCCCCEEEEEEeCC-CCcE-----EEEEEecCCCCccccccCCCCCCceEEEEEEEh
Confidence 5778888877554 5 699999999964211 1244 23346689999863 235789999999854
No 35
>3oba_A Beta-galactosidase; TIM barrel, tetramer, GH2, glycosidase, hydrolase; 2.75A {Kluyveromyces lactis} PDB: 3ob8_A
Probab=75.02 E-value=65 Score=39.10 Aligned_cols=42 Identities=17% Similarity=0.282 Sum_probs=37.5
Q ss_pred ccEEEEEeCcEEEEECCeEEEEEeCCCeeEEEEEEcCeecccc
Q 005706 55 QAVRLHIKDHHVVLDNGILQVTLSKPGGIVTGIRYNGIDNLLE 97 (682)
Q Consensus 55 a~~~~~~~g~~~vidNg~l~vtv~k~~G~itsi~y~G~enll~ 97 (682)
+++.+++++..++|.++.++++|+|.+|.++|++++|.| ||.
T Consensus 745 ~~~~~~~~~~~~~v~~~~~~~~f~k~~G~l~s~~~~g~~-~l~ 786 (1032)
T 3oba_A 745 KAAKINDGKRYVSVESSGLHFILDKLLGKIESLKVKGKE-ISS 786 (1032)
T ss_dssp CCCEEEECSSEEEEEETTEEEEEETTTTEEEEEEETTEE-EEE
T ss_pred CCcEEEecCCEEEEEECCEEEEEECCcceEEEEEECCEE-Eec
Confidence 457889999999999888999999999999999999997 543
No 36
>1w9s_A BH0236 protein, BHCBM6; carbohydrate-binding module, lectin, beta-glucan, carbohydrate binding, glycoside hydrolase; 1.59A {Bacillus halodurans} SCOP: b.18.1.10 PDB: 1w9t_A* 1w9w_A*
Probab=71.99 E-value=31 Score=31.36 Aligned_cols=82 Identities=13% Similarity=0.200 Sum_probs=49.2
Q ss_pred CCcEEEEEEEeccC-CCeEEEEEcCCCCCCCcccccccCCCCceecceeeeeeEEEEEEeeCCCeeeeecEEEEEeecCC
Q 005706 585 NSSYKLRVAIASAT-LAELQVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIEGENTIFLKQPRCT 663 (682)
Q Consensus 585 ~~~~tLriala~a~-~~~~~V~vN~~~~~~p~~~~~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~NtI~lt~~~gs 663 (682)
.+.++|.+-+|+.. ++.++|++++..- ++..+-.++..- + --.|...+.+|+ +.+|.+.|+|....+.
T Consensus 58 ~G~~~~~~rvas~~~gg~iev~~d~~~G--~~~gt~~v~~Tg-----g-w~~w~t~~~~v~---~~~G~h~l~l~f~g~~ 126 (142)
T 1w9s_A 58 RDASSIEVRVASDTPGGRIEIRTGSPTG--TLLGDVQVPNTG-----G-WQQWQTVTGNVQ---IQPGTYDVYLVFKGSP 126 (142)
T ss_dssp SCEEEEEEEEEESSSCEEEEEEESSTTS--CEEEEEEECCCS-----E-EEEEEEEEEEEE---ECSEEEEEEEEEESCT
T ss_pred CCcEEEEEEEEcCCCCeEEEEEECCCCC--eEEEEEEeCCCC-----C-CcccEEEEEEEc---cCCcEEEEEEEEECCC
Confidence 46677777777754 6899999997542 222223333221 1 124555555554 4689999999876432
Q ss_pred CCCceEEEEEEEEec
Q 005706 664 SPFQGIMYDYIRLEG 678 (682)
Q Consensus 664 s~f~~vmyD~IrLe~ 678 (682)
+.. .+-.|.++++.
T Consensus 127 ~~~-~~nld~~~f~~ 140 (142)
T 1w9s_A 127 EYD-LMNVNWFVFRA 140 (142)
T ss_dssp TSC-CCEEEEEEEEC
T ss_pred Ccc-eEEEEEEEEEe
Confidence 121 26678888874
No 37
>1oo2_A Transthyretin; retinol-binding protein, tetramer, transport protein; 1.56A {Sparus aurata} SCOP: b.3.4.1 PDB: 1sn2_A 1sn0_A 1sn5_A*
Probab=71.74 E-value=4.7 Score=36.71 Aligned_cols=60 Identities=13% Similarity=0.134 Sum_probs=39.9
Q ss_pred EEEEEEEecc-CCCccccCeeEEEecCCCCCCCcccccccceeEEEeCCCCce----EeCCccCceeEEEEEE
Q 005706 385 CVSGRLLVQD-SNDVISANGAYVGLAPPGDVGSWQTECKDYQFWTTADEDGCF----SIKNIRTGNYNLYAWV 452 (682)
Q Consensus 385 tVsG~v~~~D-~~~~~pa~~a~V~L~~~~~~gs~q~~~k~yqYwt~td~~G~F----tI~nVrpGtY~L~a~~ 452 (682)
.++=+|+... | .||.++.|-|......++|+ .-.-..||++|+. .-..+.+|.|+|..-.
T Consensus 3 ~lstHVLDt~~G---~PAagv~V~L~~~~~~~~~~-----~l~~~~Tn~DGR~~~l~~~~~~~~G~Y~l~F~t 67 (119)
T 1oo2_A 3 PLMVKILDAVKG---TPAGSVALKVSQKTADGGWT-----QIATGVTDATGEIHNLITEQQFPAGVYRVEFDT 67 (119)
T ss_dssp SEEEEEEETTTT---EECTTCEEEEEEECTTSCEE-----EEEEEECCTTSCCTTCSCGGGCCSEEEEEEECH
T ss_pred ceeEEEecCCCc---CCCCCCEEEEEEeCCCCCcE-----EEEEEecCCCCcccCcCCCCCCCceEEEEEEEh
Confidence 3555555433 5 69999999997422222354 3345679999986 2335789999999864
No 38
>4ank_A Transthyretin; hormone binding protein, thyroxine transport protein, hormon amyloidosis inhibition; 1.70A {Homo sapiens}
Probab=69.70 E-value=6.6 Score=37.01 Aligned_cols=62 Identities=13% Similarity=0.062 Sum_probs=44.0
Q ss_pred CeEEEEEEEecc-CCCccccCeeEEEecCCCCCCCcccccccceeEEEeCCCCceE----eCCccCceeEEEEEE
Q 005706 383 RGCVSGRLLVQD-SNDVISANGAYVGLAPPGDVGSWQTECKDYQFWTTADEDGCFS----IKNIRTGNYNLYAWV 452 (682)
Q Consensus 383 RGtVsG~v~~~D-~~~~~pa~~a~V~L~~~~~~gs~q~~~k~yqYwt~td~~G~Ft----I~nVrpGtY~L~a~~ 452 (682)
|.-++=+|+..- | .||.++.|-|.....+|+|+ .-.-.+||++|+.. -....+|.|+|....
T Consensus 29 k~PLTtHVLDt~~G---~PA~gv~V~L~~~~~~~~~~-----~l~~~~Td~DGR~~~ll~~~~~~~G~Y~L~F~t 95 (147)
T 4ank_A 29 KCPLMVKVLDAVRG---SPAINVAVHVFRKAADDTWE-----PFASGKTSESGELHGLTTEEEFVEGIYKVEIDT 95 (147)
T ss_dssp -CCEEEEEEETTTT---EECCSCEEEEEEECTTSCEE-----EEEEEECCTTSEECCSCCTTTCCSEEEEEEECH
T ss_pred CCCeEEEEEeCCCC---cCCCCCEEEEEEECCCCCeE-----EEEEEEeCCCCCCCCCCCccccCCceEEEEEEH
Confidence 566888877543 5 69999999997544445565 34446799999864 245788999998864
No 39
>3irp_X URO-adherence factor A; DEV-IGG fold, cell WALL, hemagglutinin, peptidoglycan-anchor secreted, virulence, cell adhesion; 1.50A {Staphylococcus saprophyticus subsp} PDB: 3irz_A 3is0_X 3is1_X
Probab=69.45 E-value=7.2 Score=42.74 Aligned_cols=63 Identities=27% Similarity=0.336 Sum_probs=44.4
Q ss_pred CCeEEEEEEEecc---CC---CccccCeeEEEecCCCCCCCcccccccceeEEEeCCCCceEeCCccCceeEEEEEEC
Q 005706 382 ERGCVSGRLLVQD---SN---DVISANGAYVGLAPPGDVGSWQTECKDYQFWTTADEDGCFSIKNIRTGNYNLYAWVP 453 (682)
Q Consensus 382 qRGtVsG~v~~~D---~~---~~~pa~~a~V~L~~~~~~gs~q~~~k~yqYwt~td~~G~FtI~nVrpGtY~L~a~~~ 453 (682)
+-+.|.|.|-.-. |. ...|..++.|-|..+. | ..---+.||++|.|.|.++.||+|++.+-.+
T Consensus 304 G~~~igg~Vw~D~n~nG~~D~~e~gl~gv~v~L~d~~--G-------~~v~tttTd~~G~Y~F~~L~~G~Y~V~~~~P 372 (429)
T 3irp_X 304 GFGGFGGYVWFDKNNDGVQNDSNAAAAGITVNLLDPT--G-------IRLATTTTDITGHYNFDNLTNGNYLVEFVMP 372 (429)
T ss_dssp CEEEEEEEEEECTTSSSSSCCSSCBCTTCEEEEECTT--S-------CEEEEEECCTTSEEEEEEEESEEEEEEECCC
T ss_pred ceEEEccEEEEeCCCCCCcCcCCCCcCCeEEEEEcCC--C-------CEEEEEEeCCCCeEEeCCCCCCcEEEEEECC
Confidence 3467788866422 11 1257788999997531 1 1234678999999999999999999987664
No 40
>1f86_A Transthyretin Thr119Met variant; protein stability, X-RAY amyloidogenesis, transport protein; HET: T44; 1.10A {Homo sapiens} SCOP: b.3.4.1 PDB: 1fhn_A 1bze_A 1fh2_A 1bzd_A 3fcb_A* 3fc8_A* 3cfm_A 3cfn_A* 3cfq_A* 3cft_A* 3m1o_A* 1bmz_A 1bm7_A 1e3f_A* 1e5a_A* 1e4h_A 1ict_A* 1tt6_A* 1tta_A 1tyr_A* ...
Probab=68.94 E-value=7.4 Score=35.21 Aligned_cols=49 Identities=14% Similarity=0.093 Sum_probs=34.6
Q ss_pred cccCeeEEEecCCCCCCCcccccccceeEEEeCCCCceE----eCCccCceeEEEEEE
Q 005706 399 ISANGAYVGLAPPGDVGSWQTECKDYQFWTTADEDGCFS----IKNIRTGNYNLYAWV 452 (682)
Q Consensus 399 ~pa~~a~V~L~~~~~~gs~q~~~k~yqYwt~td~~G~Ft----I~nVrpGtY~L~a~~ 452 (682)
.||.++.|-|......++|+ .-.-..||++|+.. -..+.+|.|+|..-.
T Consensus 14 ~PAagv~V~L~~~~~~~~~~-----~l~~~~Tn~DGR~~~l~~~~~~~~G~Y~l~F~t 66 (115)
T 1f86_A 14 SPAINVAVHVFRKAADDTWE-----PFASGKTSESGELHGLTTEEEFVEGIYKVEIDT 66 (115)
T ss_dssp EECTTCEEEEEEECTTSCEE-----EEEEEECCTTSEECCSCCTTTCCSEEEEEEECH
T ss_pred CcCCCCEEEEEEcCCCCCcE-----EEEEeecCCCccccCcCCCCCCcceEEEEEEEh
Confidence 59999999996422222354 34456799999872 346789999999854
No 41
>1uxx_X Xylanase U; carbohydrate binding module, CBM6, xylopentaose binding, xylan degradation; HET: XYP; 1.6A {Clostridium thermocellum} SCOP: b.18.1.10 PDB: 1gmm_A*
Probab=68.00 E-value=36 Score=30.67 Aligned_cols=78 Identities=18% Similarity=0.308 Sum_probs=47.2
Q ss_pred CcEEEEEEEeccC--CCeEEEEEcCCCCCCCcccccccCCCCceecceeeeeeEEEEEEeeCCCeeeeecEEEEEeecCC
Q 005706 586 SSYKLRVAIASAT--LAELQVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIEGENTIFLKQPRCT 663 (682)
Q Consensus 586 ~~~tLriala~a~--~~~~~V~vN~~~~~~p~~~~~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~NtI~lt~~~gs 663 (682)
+.+++.+-+|+.. +++++|++++..- ++..+-.++... + --.|...+.+|+ +.+|...|+|.. .|
T Consensus 51 G~~~~~~rvas~~~~gg~ievr~ds~~G--~~~gt~~v~~Tg-----g-w~~~~~~~~~v~---~~~G~h~l~l~f-~G- 117 (133)
T 1uxx_X 51 GANSFKARVASGADTPTNIQLRLGSPTG--TLIGTLTVASTG-----G-WNNYEEKSCSIT---NTTGQHDLYLVF-SG- 117 (133)
T ss_dssp CEEEEEEEEEECCSSCEEEEEEESSTTS--EEEEEEEECCCS-----E-EEEEEEEEEEEE---EECSEEEEEEEE-SS-
T ss_pred CcEEEEEEEEeCCCCCcEEEEEECCCCC--cEEEEEEeCCCC-----C-CceEEEEEEEEc---cCCcEEEEEEEE-EC-
Confidence 5666666666653 5699999998542 222223333221 1 124555555554 468999999976 44
Q ss_pred CCCceEEEEEEEEecCC
Q 005706 664 SPFQGIMYDYIRLEGPP 680 (682)
Q Consensus 664 s~f~~vmyD~IrLe~p~ 680 (682)
.+-.|.++++.+.
T Consensus 118 ----~~nl~~~~f~~~g 130 (133)
T 1uxx_X 118 ----PVNIDYFIFDSNG 130 (133)
T ss_dssp ----CCEEEEEEEECC-
T ss_pred ----CcEEEEEEEEcCC
Confidence 3678889888653
No 42
>2v4v_A GH59 galactosidase; hydrolase, family 6 carbohydrate binding module, CCCBM6; HET: XYP; 1.50A {Clostridium cellulolyticum}
Probab=67.78 E-value=36 Score=30.40 Aligned_cols=79 Identities=11% Similarity=0.212 Sum_probs=45.8
Q ss_pred CcEEEEEEEecc-CCCeEEEEEcCCCCCCCcccccccCCCCceecceeeeeeEEEEEEeeCCCeeeeecEEEEEeecCCC
Q 005706 586 SSYKLRVAIASA-TLAELQVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIEGENTIFLKQPRCTS 664 (682)
Q Consensus 586 ~~~tLriala~a-~~~~~~V~vN~~~~~~p~~~~~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~NtI~lt~~~gss 664 (682)
+.+++.+-+|++ .++.++|++++..- ++..+-.++... + -..|...+.+|+ +.+|...|+|....++
T Consensus 49 G~~~~~~rvas~~~gg~ievrlds~~G--~~~g~~~v~~Tg-----g-w~~~~t~~~~v~---~~~G~h~l~l~f~g~~- 116 (129)
T 2v4v_A 49 GVGGFQARVASATSGGNIEIRLDSSTG--TLIGTCPVAGTG-----D-WQTYTDAKCTVS---GVTGKHDVYLVFKGDS- 116 (129)
T ss_dssp CCCEEEEEEEESSCCEEEEEEESSTTS--CEEEEEEECCCS-----E-EEEEEEEEEECC---CCEEEEEEEEEEECSS-
T ss_pred CeEEEEEEEEcCCCCcEEEEEECCCCC--eEEEEEEecCCC-----C-CceeEEEEEEEc---cCCceEEEEEEEECCC-
Confidence 455555555554 46799999997532 222233333221 1 124455555553 5699999999976543
Q ss_pred CCceEEEEEEEEe
Q 005706 665 PFQGIMYDYIRLE 677 (682)
Q Consensus 665 ~f~~vmyD~IrLe 677 (682)
+. -+-.|.++++
T Consensus 117 ~~-~~nld~~~f~ 128 (129)
T 2v4v_A 117 GY-LFNLNWFTFS 128 (129)
T ss_dssp SC-CCEEEEEEEE
T ss_pred Cc-eEEEEEEEEE
Confidence 22 2666888775
No 43
>1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A*
Probab=62.33 E-value=3.7 Score=49.45 Aligned_cols=45 Identities=16% Similarity=0.039 Sum_probs=32.7
Q ss_pred CeEEEEEcCCCCCCCcccccccCCCCceecceeeeeeEEEEEEeeCCCe-eeeecEEEEEeec
Q 005706 600 AELQVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRF-IEGENTIFLKQPR 661 (682)
Q Consensus 600 ~~~~V~vN~~~~~~p~~~~~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L-~~G~NtI~lt~~~ 661 (682)
.+-+|.|||+.++. .+. ..+-.-.|.||+++| ++|.|+|.|++..
T Consensus 885 ~~~~~~VNG~~iGr----y~~-------------~~~pqr~y~VP~giLn~~G~N~i~vrv~~ 930 (971)
T 1tg7_A 885 YRVQLYVNGYQYGK----YVN-------------NIGPQTSFPVPEGILNYHGTNWLALSLWA 930 (971)
T ss_dssp EEEEEEETTEEEEE----EET-------------TTCSCCEEEECBTTBCTTSEEEEEEEEEE
T ss_pred ceEEEEECCEEEee----ecC-------------CCCCCEEEECCHHHhCcCCccEEEEEEec
Confidence 48999999986651 110 111334689999999 9999999998755
No 44
>3qva_A Transthyretin-like protein; transthyretin-related protein, 5-hydroxyisourate hydrolase,; HET: PO4; 1.75A {Klebsiella pneumoniae subsp}
Probab=58.49 E-value=19 Score=32.63 Aligned_cols=58 Identities=19% Similarity=0.208 Sum_probs=41.0
Q ss_pred CCeEEEEEEEecc-CCCccccCeeEEEecCCCCCCCcccccccceeEEEeCCCCceEe---CCccCceeEEEEEE
Q 005706 382 ERGCVSGRLLVQD-SNDVISANGAYVGLAPPGDVGSWQTECKDYQFWTTADEDGCFSI---KNIRTGNYNLYAWV 452 (682)
Q Consensus 382 qRGtVsG~v~~~D-~~~~~pa~~a~V~L~~~~~~gs~q~~~k~yqYwt~td~~G~FtI---~nVrpGtY~L~a~~ 452 (682)
+-+.++=+|+... | .||.++.|-|.. .+ ..-.-+.||+||+... ..+.+|+|+|..-.
T Consensus 8 ~M~~lstHVLDt~~G---~PAagv~V~L~~--------~~--~~l~~~~Tn~DGR~~~l~~~~~~~G~Y~L~F~t 69 (116)
T 3qva_A 8 HMSTLSTHILDISTG---TPAEGVTVSLSR--------EG--ETLANLVTNAQGRIATFSAAPLPAGRYCLTAET 69 (116)
T ss_dssp -CBCEEEEEEETTTT---EECTTCEEEEEE--------TT--EEEEEEECCTTSEECCSCSSCBCSSEEEEEECH
T ss_pred ccCCeeeEEeecCCC---cCCCCCEEEEEE--------cc--EeEEEeccCCCCCccccccccCCCceEEEEEeH
Confidence 3466888877544 5 699999999953 11 2234467999998642 45789999999864
No 45
>3lvt_A Glycosyl hydrolase, family 38; PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.55A {Enterococcus faecalis}
Probab=58.31 E-value=61 Score=38.57 Aligned_cols=124 Identities=10% Similarity=0.096 Sum_probs=73.4
Q ss_pred ccCccccccEEEEEeC------------cEEEEECCeEEEEEeCCCeeEEEEEE--cCeecccccccCCCcceeeEEEeC
Q 005706 48 TWPAMPTQAVRLHIKD------------HHVVLDNGILQVTLSKPGGIVTGIRY--NGIDNLLEFRNKETNRGYWDLMWN 113 (682)
Q Consensus 48 ~~~~~~~a~~~~~~~g------------~~~vidNg~l~vtv~k~~G~itsi~y--~G~enll~~~~~~~~~gY~D~~w~ 113 (682)
..|++..+.+.+.... ...+|+|+.+.|+|++ +|.| +|.= +|.+ +.. -.-|+|. |+
T Consensus 498 ~vPalGy~~~~i~~~~~~~~~~~~~~~~~~~~leN~~~~v~~d~-~G~l-sl~Dk~~gre-~~~------~~~~~d~-gd 567 (899)
T 3lvt_A 498 EMAPFSWDSFALIQGETKAFEGSLLAQPATNEMENEFIQVKIEN-NGSL-TIADKKTGET-FSK------LLTFEDT-GD 567 (899)
T ss_dssp EECTTEEEEEEEEESCCCCCCSCCSEETTTTEEECSSEEEEECT-TSCE-EEEETTTCCE-EEE------ETEEEEE-EC
T ss_pred CCCCCCCEEEEEEecCcccccccccccccCcEEecCcEEEEEcC-CCcE-EEEECCCCeE-EEE------EEEEecC-CC
Confidence 5666666666665321 2358999999999987 8999 6742 4443 221 0114443 22
Q ss_pred CCC--------CCCceeee-ccceEEEEEecCCEEEEEEEEeec-C-CC------------------CC---Ccccceee
Q 005706 114 PPG--------GKGMFDVI-SGTSFRVVVENEEQVELSFLRTWA-S-SH------------------EG---NYIPLNID 161 (682)
Q Consensus 114 ~~g--------~~g~~~~~-~gt~~~vi~~~~~~i~Vs~~~~~~-~-s~------------------~g---~~~~l~l~ 161 (682)
.++ ..-.+... ...+++|+++++-...|.+...|. | +. .| ...++.|.
T Consensus 568 ~g~~Y~~~p~~~d~~~~~~~~~~~v~v~e~gpl~~~v~v~~~~~~P~~~~~~~~~~~~~~~~~~~r~~~~S~~~~~~~i~ 647 (899)
T 3lvt_A 568 IGNEYIFFKPTEDQGITTENVTAEITNKENSPVKASYQIKQTVMLPVAADERLEEEQKAVREFRERLAQRSTTLRPFEIT 647 (899)
T ss_dssp CSBTTBCCCCTTCCCEESTTCCCEEEEEEECSSEEEEEEEEEEEEESSBCTHHHHHHHTTCCGGGCCCCBCSCEEEEEEE
T ss_pred CCCceeecCCcCCceeeccCCCceEEEEEcCCCEEEEEEEEEEccccchhhhhcccccccccchhhhhcccccccceEEE
Confidence 221 00011000 125778888888777777666653 1 00 01 23677899
Q ss_pred EEEEEecCCceeEEEEEeec
Q 005706 162 KRFIMLRGSSGFYSYAIYEH 181 (682)
Q Consensus 162 ~~~v~r~G~sgiY~y~~~~~ 181 (682)
+.+.|.+|++-|-.-+.+..
T Consensus 648 q~i~L~~~~~~id~~~~Vdw 667 (899)
T 3lvt_A 648 TMVTMIKESNQLFFETTINN 667 (899)
T ss_dssp EEEEEETTCCCEEEEEEEEE
T ss_pred EEEEEeCCCCEEEEEEEECC
Confidence 99999999999888666644
No 46
>3e8v_A Possible transglutaminase-family protein; structural genomics, unknown function, PSI-2, protein structure initiative; 2.40A {Bacteroides fragilis nctc 9343}
Probab=56.95 E-value=69 Score=27.25 Aligned_cols=58 Identities=19% Similarity=0.203 Sum_probs=37.8
Q ss_pred EEEEEEeccCCCccccCeeEEEecCCCCCCCcccccccceeE----EEeCCCCceEeCCccCceeEEEEEECceee
Q 005706 386 VSGRLLVQDSNDVISANGAYVGLAPPGDVGSWQTECKDYQFW----TTADEDGCFSIKNIRTGNYNLYAWVPGFVG 457 (682)
Q Consensus 386 VsG~v~~~D~~~~~pa~~a~V~L~~~~~~gs~q~~~k~yqYw----t~td~~G~FtI~nVrpGtY~L~a~~~G~~G 457 (682)
++=+|...+|+ |+.+|.|-+. +.+ . +.|+ .+||++|.|++. +=-|+-.+.|..+|..|
T Consensus 3 ~~v~V~d~~Gk---PV~gA~Vefe-------~yN--y-ae~~~~~~~~TD~~G~~s~~-~G~Gd~~v~A~k~G~~g 64 (82)
T 3e8v_A 3 GSVLVTDAEGQ---PVADATVEFK-------VYN--Y-AEFYTVATKHTDRSGHASLT-AGKGDMLVWASKDGRFG 64 (82)
T ss_dssp EEEEEECTTSC---BCTTCEEEEE-------EEE--T-TEEEEEEEEECCTTSEEEEE-CCSEEEEEEEEETTEEE
T ss_pred EEEEEEcCCCC---CCCCCEEEEE-------EEE--c-hheeEEEEEEECCCceEEEE-EcCCceEEEeccCCEEE
Confidence 34455656664 8888877763 111 1 3333 368999999995 55677777777887655
No 47
>3kpt_A Collagen adhesion protein; intramolecular amide bond, pilin subunit, beta sheet; 2.10A {Bacillus cereus atcc 14579} PDB: 3rkp_A
Probab=56.73 E-value=10 Score=40.19 Aligned_cols=46 Identities=15% Similarity=0.211 Sum_probs=33.4
Q ss_pred cccCeeEEEecCCCCCCCcccccccceeEEEeCCCCceEeCCccCceeEEEEEE
Q 005706 399 ISANGAYVGLAPPGDVGSWQTECKDYQFWTTADEDGCFSIKNIRTGNYNLYAWV 452 (682)
Q Consensus 399 ~pa~~a~V~L~~~~~~gs~q~~~k~yqYwt~td~~G~FtI~nVrpGtY~L~a~~ 452 (682)
.+..+|...|.... +....--..||++|.++|.++++|+|.|.=..
T Consensus 20 ~~L~GA~F~l~~~~--------g~~~~~~~tTd~~G~~~~~~L~~G~Y~~~Et~ 65 (355)
T 3kpt_A 20 KAMAGAVFSLFKKD--------GTEVKKELATDANGHIRVQGLEYGEYYFQETK 65 (355)
T ss_dssp CBCCSCEEEEEETT--------SCEEEEEEECCTTSEEEEEEEESEEEEEEEEE
T ss_pred CCcCCcEEEEEECC--------CCEEEEEEEECCCCeEEECCcCCceEEEEEEe
Confidence 58889999986421 11122234689999999999999999987653
No 48
>2pz4_A Protein GBS052; SPAB, GRAM-positive pilins, adhesions, IGG-like domain, cell adhesion; 1.80A {Streptococcus agalactiae} PDB: 3phs_A
Probab=55.96 E-value=11 Score=37.64 Aligned_cols=75 Identities=17% Similarity=0.217 Sum_probs=44.9
Q ss_pred ccccCeeEEEecCCCCCCCccc-ccccc-------eeEEEeCCCCceEeCCccCceeEEEEEE--CceeeeeeeeeEEEE
Q 005706 398 VISANGAYVGLAPPGDVGSWQT-ECKDY-------QFWTTADEDGCFSIKNIRTGNYNLYAWV--PGFVGDYRSDALVTI 467 (682)
Q Consensus 398 ~~pa~~a~V~L~~~~~~gs~q~-~~k~y-------qYwt~td~~G~FtI~nVrpGtY~L~a~~--~G~~G~~~~~~~VtV 467 (682)
..+..+|...|.... |..-. ...++ .--..||++|.|+|.++++|+|.|.=-. .|+.=+ ...-.|+|
T Consensus 140 ~~~L~GA~F~l~~~~--g~~~~~~~~g~~~~~~~~~~~~~Td~~G~~~~~~L~~G~Y~l~EtkAP~GY~l~-~~~~~f~i 216 (239)
T 2pz4_A 140 KKPLAGVVFELYEKN--GRTPIRVKNGVHSQDIDAAKHLETDSSGHIRISGLIHGDYVLKEIETQSGYQIG-QAETAVTI 216 (239)
T ss_dssp EEECCSCEEEEEETT--CSSCBCEETTEECCSTTCBSCEECCTTSEEEEEEEESEEEEEEEEECCTTBCCC-CSEEEEEE
T ss_pred CcccCCCEEEEEeCC--CCEEEeecccceecccccceEEEECCCCeEEECCCCCceEEEEEEECCCCcCcC-CccEEEEE
Confidence 357888888887521 21110 00000 0123589999999999999999987653 343200 11346888
Q ss_pred eCCceeee
Q 005706 468 TSGSNIKM 475 (682)
Q Consensus 468 ~aG~t~~l 475 (682)
++++++.+
T Consensus 217 ~~~~~~~~ 224 (239)
T 2pz4_A 217 EKSKTVTV 224 (239)
T ss_dssp CTTSEEEE
T ss_pred eCCCeEEE
Confidence 88876554
No 49
>1od3_A Putative xylanase; hydrolase, carbohydrate binding module, beta-sandwich, laminaribiose; HET: BGC; 1.0A {Clostridium stercorarium} SCOP: b.18.1.10 PDB: 1nae_A* 1o8s_A* 1o8p_A
Probab=55.67 E-value=74 Score=30.05 Aligned_cols=77 Identities=18% Similarity=0.271 Sum_probs=48.8
Q ss_pred CcEEEEEEEeccCCCeEEEEEcCCCCCCCcccccccCCCCceecceeeeeeEEEEEEeeCCCeeeeecEEEEEeecCCCC
Q 005706 586 SSYKLRVAIASATLAELQVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIEGENTIFLKQPRCTSP 665 (682)
Q Consensus 586 ~~~tLriala~a~~~~~~V~vN~~~~~~p~~~~~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~NtI~lt~~~gss~ 665 (682)
+.+++.+-+|++.++.++|++++..- ++..+-.+++..+ --.|...+.+|+ +.+|...|+|... |
T Consensus 90 G~~~~~~rvas~~~G~ievrlds~~G--~~lgt~~vp~Tgg------w~~w~tvt~~v~---~~~G~hdLylvf~-G--- 154 (168)
T 1od3_A 90 GATSVTARVATQNATTIQVRLGSPSG--TLLGTIYVGSTGS------FDTYRDVSATIS---NTAGVKDIVLVFS-G--- 154 (168)
T ss_dssp CEEEEEEEEECSSCEEEEEEESSTTS--CEEEEEEECCCSS------TTCCEEEEEEEE---EECSEEEEEEEES-S---
T ss_pred CcEEEEEEEEcCCCcEEEEEECCCCC--cEEEEEEeCCCCC------CcccEEEEEEEc---CCCcEEEEEEEEE-C---
Confidence 66777777777667899999998542 2222233332211 114566666665 4689999999764 4
Q ss_pred CceEEEEEEEEecC
Q 005706 666 FQGIMYDYIRLEGP 679 (682)
Q Consensus 666 f~~vmyD~IrLe~p 679 (682)
++-.|.++++..
T Consensus 155 --~~nldw~~F~~~ 166 (168)
T 1od3_A 155 --PVNVDWFVFSKS 166 (168)
T ss_dssp --CCEEEEEEEECC
T ss_pred --CcEEEEEEEEeC
Confidence 367888888753
No 50
>4hg6_B Cellulose synthase subunit B; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=55.65 E-value=13 Score=43.01 Aligned_cols=77 Identities=18% Similarity=0.180 Sum_probs=52.5
Q ss_pred cEEEEEEeCCCCC---CCcEEEEEEEecc----CCCeEEEEEcCCCCCCCcccccccCCCCceecceeeeeeEEEEEEee
Q 005706 572 TWQIKFKLDHVDR---NSSYKLRVAIASA----TLAELQVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIP 644 (682)
Q Consensus 572 ~w~I~F~L~~~~~---~~~~tLriala~a----~~~~~~V~vN~~~~~~p~~~~~~~~~~~~i~R~~~~G~~~~~~~~ip 644 (682)
+-.|.|.+..+.- ....+|.+..+-+ ..+++.|.|||+-+. +..+.+.. .|....+++.||
T Consensus 319 ~i~V~FrLPPDLfvw~~tga~L~L~YRYSp~l~~~S~L~VsLNgqfV~-----SlPL~~~~-------~g~~~~~~IpLP 386 (707)
T 4hg6_B 319 NRDIDFQLPDDWLLLASQKAQIGIDYGFAGGLPEGALLLVKVNGTTVR-----MLPLDRDA-------APVKPRLDIRFP 386 (707)
T ss_dssp EEEEEEECCSSCCCCSSCEEEEEECEEECSSCCTTCEEEEEETTEEEE-----EEESSSCC-------BSSCCCEEEEEE
T ss_pred CceeEEeCCCCeecccCCCceEEEEEecCCCCCCCCeEEEEECCEEEE-----EEEcCccc-------CCccceeEeecC
Confidence 5678888876652 2446666655544 358999999998664 12222211 134566899999
Q ss_pred CCCeeeeecEEEEEee
Q 005706 645 GTRFIEGENTIFLKQP 660 (682)
Q Consensus 645 a~~L~~G~NtI~lt~~ 660 (682)
+.+|+.|.|.|.|...
T Consensus 387 p~ll~~g~NqL~FeF~ 402 (707)
T 4hg6_B 387 ARLLHPGPNRLSFESV 402 (707)
T ss_dssp GGGCCSSEEEEEEEEE
T ss_pred HHHcCCCCceEEEEEE
Confidence 9999889999999864
No 51
>2ww8_A RRGA, cell WALL surface anchor family protein; IGG, pilus, CNA_B, adhesin, integrin, cell adhesion; HET: EPE; 1.90A {Streptococcus pneumoniae}
Probab=53.38 E-value=31 Score=41.25 Aligned_cols=81 Identities=17% Similarity=0.111 Sum_probs=49.9
Q ss_pred CCeEEEEEEEeccCCCccccCeeEEEecCCCCCCCcccccccceeEEEeCCCCceEeCCccCceeEEEEEE--Cceeeee
Q 005706 382 ERGCVSGRLLVQDSNDVISANGAYVGLAPPGDVGSWQTECKDYQFWTTADEDGCFSIKNIRTGNYNLYAWV--PGFVGDY 459 (682)
Q Consensus 382 qRGtVsG~v~~~D~~~~~pa~~a~V~L~~~~~~gs~q~~~k~yqYwt~td~~G~FtI~nVrpGtY~L~a~~--~G~~G~~ 459 (682)
..|+|+-+=...++ .+..+|..-|..... .....-..||++|.++|.+++||+|+|.=-. .|+.-+
T Consensus 46 ~~G~~~i~K~d~~~---~~L~GA~F~l~~~~~--------~~~~~~~tTd~~G~~~~~~L~~G~Y~l~Et~AP~GY~l~- 113 (893)
T 2ww8_A 46 AIGKVVIKETGEGG---ALLGDAVFELKNNTD--------GTTVSQRTEAQTGEAIFSNIKPGTYTLTEAQPPVGYKPS- 113 (893)
T ss_dssp CCEEEEEEEECSTT---CBCCCCEEEEEETTT--------CCEEEEECCTTTCEEEEEEECSEEEEEEEEECCTTBCCC-
T ss_pred ceEEEEEEEECCCC---CccCCCEEEEEECCC--------CeEEEEEEECCCCeEEECCCCCCcEEEEEccCCCceecC-
Confidence 35777654333223 588899998865321 1112324579999999999999999998775 343211
Q ss_pred eeeeEEEEeCCceee
Q 005706 460 RSDALVTITSGSNIK 474 (682)
Q Consensus 460 ~~~~~VtV~aG~t~~ 474 (682)
...-.|+|++...++
T Consensus 114 ~~~~~v~v~~~g~~~ 128 (893)
T 2ww8_A 114 TKQWTVEVEKNGRTT 128 (893)
T ss_dssp CCEEEEEECTTCCEE
T ss_pred CccEEEEECCCceEE
Confidence 123357776554433
No 52
>3iwv_A 5-hydroxyisourate hydrolase; transthyretin, molecular evolution, URIC acid degradation, T hormones, peroxisome, purine metabolism; 1.68A {Danio rerio} PDB: 3iwu_A 3q1e_A 2h6u_A 2h1x_A
Probab=53.18 E-value=11 Score=35.21 Aligned_cols=62 Identities=16% Similarity=0.187 Sum_probs=42.1
Q ss_pred CeEEEEEEEecc-CCCccccCeeEEEecCCC-CCCCcccccccceeEEEeCCCCceE--e--CCccCceeEEEEEE
Q 005706 383 RGCVSGRLLVQD-SNDVISANGAYVGLAPPG-DVGSWQTECKDYQFWTTADEDGCFS--I--KNIRTGNYNLYAWV 452 (682)
Q Consensus 383 RGtVsG~v~~~D-~~~~~pa~~a~V~L~~~~-~~gs~q~~~k~yqYwt~td~~G~Ft--I--~nVrpGtY~L~a~~ 452 (682)
++.++=.|+... | .||.++.|-|.... ..+.|+ .-.-+.||+||+.. + ..+.+|+|+|..-.
T Consensus 25 ~~~LTtHVLDt~~G---~PAagv~V~L~~~~~~~~~w~-----~l~~~~Tn~DGR~~~ll~~~~~~~G~Y~L~F~t 92 (138)
T 3iwv_A 25 LSPLSTHVLNIAQG---VPGANMTIVLHRLDPVSSAWN-----ILTTGITNDDGRCPGLITKENFIAGVYKMRFET 92 (138)
T ss_dssp -CCEECCEEETTTT---EECTTCEEEEEEECSSSCCEE-----EEEEEECCTTSCCTTSSCTTTCCSEEEEEEECH
T ss_pred CCCceEEEeecCCc---cCCCCCEEEEEEECCCCCCcE-----EEEEEecCCCCCcCCccCcccCCCceEEEEEeh
Confidence 577888777544 5 59999999997422 112343 23345799999864 2 35889999999864
No 53
>1uy4_A Endo-1,4-beta-xylanase A; carbohydrate-binding module, thermodynamics, protein structure, protein-carbohydrate interactions; HET: XYP; 1.69A {Clostridium stercorarium} SCOP: b.18.1.10 PDB: 1uy1_A* 1uy3_A* 1uy2_A*
Probab=53.13 E-value=86 Score=28.74 Aligned_cols=76 Identities=18% Similarity=0.245 Sum_probs=47.2
Q ss_pred CcEEEEEEEeccCCCeEEEEEcCCCCCCCcccccccCCCCceecceeeeeeEEEEEEeeCCCeeeeecEEEEEeecCCCC
Q 005706 586 SSYKLRVAIASATLAELQVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIEGENTIFLKQPRCTSP 665 (682)
Q Consensus 586 ~~~tLriala~a~~~~~~V~vN~~~~~~p~~~~~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~NtI~lt~~~gss~ 665 (682)
+.+++.+-+|++.+++++|++++..- ++..+-.+++.-+ --.|...+.+|. +.+|...|+|.. .|
T Consensus 68 G~~~~~~rvas~~gg~ievrlds~~G--~~lgt~~v~~Tgg------w~~w~tv~~~v~---~~~G~h~lyl~f-~g--- 132 (145)
T 1uy4_A 68 GATGFSATVATEVNTSIQIRSDSPTG--TLLGTLYVSSTGS------WNTYNTVSTNIS---KITGVHDIVLVF-SG--- 132 (145)
T ss_dssp CEEEEEEEEECSSCEEEEEEESSTTS--CEEEEEEECCCSS------TTCCEEEEEEEE---EECSEEEEEEEE-SS---
T ss_pred CCEEEEEEEEeCCCcEEEEEECCCCC--cEEEEEEecCCCC------CcccEEEEEEec---CCCceEEEEEEE-eC---
Confidence 56666666666667899999997532 2333333332211 113555666654 368999999986 44
Q ss_pred CceEEEEEEEEec
Q 005706 666 FQGIMYDYIRLEG 678 (682)
Q Consensus 666 f~~vmyD~IrLe~ 678 (682)
++-.|.++++.
T Consensus 133 --~~nl~~~~F~~ 143 (145)
T 1uy4_A 133 --PVNVDNFIFSR 143 (145)
T ss_dssp --CCEEEEEEEEE
T ss_pred --CeEEEEEEEEe
Confidence 36778888874
No 54
>2vzs_A CSXA, EXO-beta-D-glucosaminidase; hydrolase, GH2, glucosamine, glycoside hydrolase; HET: GCS; 1.85A {Amycolatopsis orientalis} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2x05_A* 2x09_A* 2vzo_A 2vzt_A* 2vzv_A* 2vzu_A*
Probab=51.55 E-value=3.1 Score=50.38 Aligned_cols=86 Identities=19% Similarity=0.213 Sum_probs=0.0
Q ss_pred EEEEEeCCCCCCCcEEEEEEEeccC--CCeEEEEEcCCCCCCCcccccccCCCCceecceeeeeeEEEEEEeeCCCeeee
Q 005706 574 QIKFKLDHVDRNSSYKLRVAIASAT--LAELQVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIEG 651 (682)
Q Consensus 574 ~I~F~L~~~~~~~~~tLriala~a~--~~~~~V~vN~~~~~~p~~~~~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G 651 (682)
.|.|++.. +..|.|+|.|-.|... .....|.|||.... .+..++... +.. .+...++.| .|++|
T Consensus 945 ~v~~~V~v-~~aG~Y~l~iryan~~~~~r~~~l~VNG~~~~----~~v~~~~Tg-----~W~-~w~~~~~~v---~L~aG 1010 (1032)
T 2vzs_A 945 SVEWTVTV-PSAGTYDVVVRYANGTTTSRPLDFSVNGSISA----SGVAFGSTG-----TWP-AWTTKTVRV---TLAAG 1010 (1032)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEEEEEC-CCCeEEEEEEEEEcCCCCCeeEEEEECCeEee----eEEEecCCC-----CCC-ccEEEEEEE---EECCC
Confidence 35666543 3478999999988754 45789999997531 011221110 110 133333333 38999
Q ss_pred ecEEEEEeecCCCCCceEEEEEEEE
Q 005706 652 ENTIFLKQPRCTSPFQGIMYDYIRL 676 (682)
Q Consensus 652 ~NtI~lt~~~gss~f~~vmyD~IrL 676 (682)
.|+|+|....+. + ++=.|+|.+
T Consensus 1011 ~NtI~~~~~~~~-g--~~niD~i~v 1032 (1032)
T 2vzs_A 1011 VNKIKAVATTAN-G--GPNVDKITL 1032 (1032)
T ss_dssp -------------------------
T ss_pred ceEEEEEEcCCc-C--ceEEEEEEC
Confidence 999999864222 2 466677754
No 55
>4hg6_B Cellulose synthase subunit B; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=49.11 E-value=13 Score=43.10 Aligned_cols=74 Identities=15% Similarity=0.100 Sum_probs=51.3
Q ss_pred ccEEEEEEeCCCCCCCcEEEEEEEecc-----CCCeEEEEEcCCCCCCCcccccccCCCCceecceeeeeeEEEEEEeeC
Q 005706 571 TTWQIKFKLDHVDRNSSYKLRVAIASA-----TLAELQVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPG 645 (682)
Q Consensus 571 ~~w~I~F~L~~~~~~~~~tLriala~a-----~~~~~~V~vN~~~~~~p~~~~~~~~~~~~i~R~~~~G~~~~~~~~ipa 645 (682)
..-.+.|.++.+ ...++|+|..+.+ ..++++|.|||+..+ +-.+..... ....+|+||+
T Consensus 61 ~~~~~~f~l~~v--Vt~A~L~L~Yt~SPsLlPe~S~LkV~LNge~VG-----tlpl~~~~~---------~~~~~i~Ipp 124 (707)
T 4hg6_B 61 ARAAFRLFLPTE--AVGGTLTLAQRSSIDILPESSQIIVRMNDQEIG-----RFTPRQFGA---------LGAVTMPLGE 124 (707)
T ss_dssp SEEEEEEECSSC--CTTCCBBCEEECSSCCCBTTBEEEEEETTEEEE-----EECCCCCSS---------CCCBCCCCCS
T ss_pred CceeEEEEccch--heeEEEEEEEeeCccccCccceEEEEECCEEEE-----EEecCCCCC---------ceeEEEecCh
Confidence 456777888773 3457777777765 358999999998664 111222111 2345999998
Q ss_pred CCeeeeecEEEEEeec
Q 005706 646 TRFIEGENTIFLKQPR 661 (682)
Q Consensus 646 ~~L~~G~NtI~lt~~~ 661 (682)
.|..|.|.|.|....
T Consensus 125 -~l~~gfN~L~fe~ig 139 (707)
T 4hg6_B 125 -AVRAGDNLVTIEAQH 139 (707)
T ss_dssp -SSCSSEEEEEEEEEC
T ss_pred -HHcCCcceEEEEEcC
Confidence 898999999999764
No 56
>3fn9_A Putative beta-galactosidase; structural genomics, glycosidas hydrolase, PSI-2, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=47.12 E-value=11 Score=43.57 Aligned_cols=69 Identities=25% Similarity=0.154 Sum_probs=46.5
Q ss_pred cEEEEEEeCCCCCCCcEEEEEEEeccCCCeEEEEEcCCCCCCCcccccccCCCCceecceeeeeeEEEEEEeeCCCeeee
Q 005706 572 TWQIKFKLDHVDRNSSYKLRVAIASATLAELQVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIEG 651 (682)
Q Consensus 572 ~w~I~F~L~~~~~~~~~tLriala~a~~~~~~V~vN~~~~~~p~~~~~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G 651 (682)
-.+=.|.+++........|++.. ......|.|||+.++ .-.|-+..++|+|+ ..|+.|
T Consensus 63 wYr~~f~~p~~~~~~~~~L~f~g---v~~~a~V~vNG~~vg------------------~~~~g~~~f~~dIt-~~l~~G 120 (692)
T 3fn9_A 63 YYRKTQFFPHDLEGKRVFLRFEG---VGACAEVYVNGKLAG------------------THKGGYSAFACEIG-TALKLG 120 (692)
T ss_dssp EEEEEEEECGGGTTCEEEEEESC---CBSEEEEEETTEEEE------------------EEECTTSCEEEECG-GGCCTT
T ss_pred EEEEEEEECchhCCCeEEEEECC---ccEeeEEEECCEEee------------------eEcCCcceEEEECh-HhcCCC
Confidence 44556888765433345555543 345678999997542 11244567899998 788898
Q ss_pred -ecEEEEEeecC
Q 005706 652 -ENTIFLKQPRC 662 (682)
Q Consensus 652 -~NtI~lt~~~g 662 (682)
+|+|.+.+.+.
T Consensus 121 ~~N~l~V~v~~~ 132 (692)
T 3fn9_A 121 AENEIIVKADNK 132 (692)
T ss_dssp EEEEEEEEEECC
T ss_pred CceEEEEEEECC
Confidence 89999998664
No 57
>1yua_A Topoisomerase I; gene-regulating protein, DNA binding protein; NMR {Escherichia coli} SCOP: g.41.3.3 g.41.3.3
Probab=46.83 E-value=7.8 Score=34.88 Aligned_cols=47 Identities=28% Similarity=0.316 Sum_probs=29.0
Q ss_pred eeEEEEEecCCceeEEEEEeeccc--cCCCCCccceEE-EEEeCccCcccee
Q 005706 160 IDKRFIMLRGSSGFYSYAIYEHLK--EWPAFTLGQTRF-TFKLRKEKFRYMV 208 (682)
Q Consensus 160 l~~~~v~r~G~sgiY~y~~~~~~~--~~p~~~lgE~R~-v~Rl~~~~f~~~~ 208 (682)
.|-|||||+|-+|+++.+.. -+. +.-++-|.||+- --|| +.+|.|++
T Consensus 23 ~d~~fVLRDGAsGlFlAAs~-FPK~RETRaP~V~EL~~~~d~l-~~K~~yL~ 72 (122)
T 1yua_A 23 SDAYFVLRDGAAGVFLAANT-FPKSRETRAPLVEELYRFRDRL-PEKLRYLA 72 (122)
T ss_dssp SSCEEEEECCSSSCEEEETT-TTSCCCCCSCBHHHHHHTTTTC-CSTTHHHH
T ss_pred cCCEEEeeCCchhhhhhhcc-CCccccccchHHHHHHHHHHhc-CHHHHHhh
Confidence 48899999999999998762 211 333455666542 2233 34566553
No 58
>1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1
Probab=46.69 E-value=36 Score=39.37 Aligned_cols=59 Identities=15% Similarity=0.357 Sum_probs=41.3
Q ss_pred CeEEEEEEEeccCCCccccCeeEEEecCCCCCCCcccccccceeEEEeCCCCceEeCCccCceeEEEEE
Q 005706 383 RGCVSGRLLVQDSNDVISANGAYVGLAPPGDVGSWQTECKDYQFWTTADEDGCFSIKNIRTGNYNLYAW 451 (682)
Q Consensus 383 RGtVsG~v~~~D~~~~~pa~~a~V~L~~~~~~gs~q~~~k~yqYwt~td~~G~FtI~nVrpGtY~L~a~ 451 (682)
.|...-++.+.|.....++..+.|.|..+ .+..|+++++.+|...|..+.||+|+|++-
T Consensus 445 ~~~~~~~v~vtd~~~~~~~~~~~v~l~~~----------~~~~~~~~t~~dg~~~~~~~~~G~Y~~~v~ 503 (671)
T 1r6v_A 445 GGVEEFQVVVTDAKGNFGVPTVFVSMMRD----------NGSCYYAKTGPDGIARFPHIDSGTYDIFVG 503 (671)
T ss_dssp SEEEEEEEEEECTTSCSBCTTEEEEEECS----------SSCCEEEECCTTSEEEEEEEECEEEEEEEE
T ss_pred CCccceEEEEecCCCCcCcceeEEEEecC----------CCceEecccCCCCceeeeccCceEEEEEEe
Confidence 34433355555633223344566777654 356789999999999999999999999985
No 59
>2x5p_A FBA2, fibronectin binding protein; protein binding; 1.60A {Streptococcus pyogenes}
Probab=45.26 E-value=41 Score=30.41 Aligned_cols=43 Identities=21% Similarity=0.275 Sum_probs=30.6
Q ss_pred cccCeeEEEecCCCCCCCcccccccceeEEEeCCCCceEeCCccCceeEEEEEE
Q 005706 399 ISANGAYVGLAPPGDVGSWQTECKDYQFWTTADEDGCFSIKNIRTGNYNLYAWV 452 (682)
Q Consensus 399 ~pa~~a~V~L~~~~~~gs~q~~~k~yqYwt~td~~G~FtI~nVrpGtY~L~a~~ 452 (682)
.+..+|..-|.... .+-.+=|+ ++|.++|.+++||+|+|.=-.
T Consensus 40 ~~L~GA~F~l~~~~--------g~~v~~~~---sdG~~~~~~L~~G~Y~l~Etk 82 (121)
T 2x5p_A 40 KELAGATMELRDSS--------GKTISTWI---SDGQVKDFYLMPGKYTFVETA 82 (121)
T ss_dssp CBCCCCEEEEECTT--------SCEEEEEE---CCSSCEEEEECSEEEEEEEEE
T ss_pred CCcCCCEEEEEECC--------CCEEEEEE---eCCEEEEcccCCcEEEEEEEe
Confidence 47888888887421 11223354 479999999999999997653
No 60
>3c7f_A Xylanase D, endo-1,4-beta-xylanase; 5-bladed beta-propeller fold, beta-sandwich, xylan degradati hydrolase; HET: XYP; 1.55A {Bacillus subtilis} PDB: 3c7e_A* 3c7h_A* 3c7o_A* 3c7g_A*
Probab=43.68 E-value=1.1e+02 Score=33.27 Aligned_cols=80 Identities=13% Similarity=0.218 Sum_probs=47.4
Q ss_pred CcEEEEEEEeccCCCeEEEEEcCCCCCCCcccccccCCCCceecceeeeeeEEEEEEeeCCCeeeeecEEEEEeecCCCC
Q 005706 586 SSYKLRVAIASATLAELQVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIEGENTIFLKQPRCTSP 665 (682)
Q Consensus 586 ~~~tLriala~a~~~~~~V~vN~~~~~~p~~~~~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~NtI~lt~~~gss~ 665 (682)
+.++|.+-+|+.++++++|++++..- ++..+-.++...+ --.|+..+.+| .. .+|.+.|+|....+.+.
T Consensus 406 g~~~~~~~vas~~~g~ievr~~s~~G--~~~g~~~v~~tgg------~~~w~~~~~~v--~~-~~G~h~ly~~f~g~~~~ 474 (487)
T 3c7f_A 406 GARSFKANVASTLGGKIEVRLDSADG--KLVGTLNVPSTGG------AQTWREIETAV--SG-ATGVHKVFFVFTGTGTG 474 (487)
T ss_dssp CEEEEEEEEEESSCEEEEEEESSTTS--CEEEEEEECCCSE------EEEEEEEEEEC--CS-CCSEEEEEEEEECSCSS
T ss_pred CccEEEEEEEeCCCcEEEEEECCCCC--cEEEEEEeCCCCC------CcccEEEEEEE--cC-CCceEEEEEEEECCCCc
Confidence 56666666677678899999987533 2223333332211 12344455555 33 58999999987553211
Q ss_pred CceEEEEEEEEe
Q 005706 666 FQGIMYDYIRLE 677 (682)
Q Consensus 666 f~~vmyD~IrLe 677 (682)
.-+-+|.++++
T Consensus 475 -~l~~~~~~~f~ 485 (487)
T 3c7f_A 475 -NLFNFDYWQFT 485 (487)
T ss_dssp -CCCEEEEEEEE
T ss_pred -ceEEEEEEEEE
Confidence 12667888876
No 61
>2h0e_A Transthyretin-like protein PUCM; beta sandwitch, hydrolase, HIU; 2.20A {Bacillus subtilis} PDB: 2h0f_A* 2h0j_A*
Probab=43.58 E-value=27 Score=31.81 Aligned_cols=57 Identities=18% Similarity=0.197 Sum_probs=40.2
Q ss_pred eEEEEEEEecc-CCCccccCeeEEEecCCCCCCCcccccccceeEEEeCCCCceE-----eCCccCceeEEEEEE
Q 005706 384 GCVSGRLLVQD-SNDVISANGAYVGLAPPGDVGSWQTECKDYQFWTTADEDGCFS-----IKNIRTGNYNLYAWV 452 (682)
Q Consensus 384 GtVsG~v~~~D-~~~~~pa~~a~V~L~~~~~~gs~q~~~k~yqYwt~td~~G~Ft-----I~nVrpGtY~L~a~~ 452 (682)
+.++=+|+... | .||.++.|-|.... |+ ...-..||+||+.. -..+++|.|+|..-.
T Consensus 9 ~~lstHVLDt~~G---~PAagv~V~L~~~~----~~-----~l~~~~Tn~DGR~~~~~~~~~~~~~G~Y~l~F~t 71 (121)
T 2h0e_A 9 GKLTTHILDLTCG---KPAANVKIGLKRLG----ES-----IMKEVYTNNDGRVDVPLLAGEELMSGEYVMEFHA 71 (121)
T ss_dssp CEEECCEEETTTT---EECTTCEEEEEETT----SC-----CCEEEECCTTSSCSSCSEEGGGCCSEEEEEEECH
T ss_pred CCeeEEEecCCCc---CCCCCCEEEEEECC----ce-----EEEEEecCCCCCccCCcCCCCCcCceEEEEEEEh
Confidence 45666666443 5 69999999996421 33 34457799999863 336889999999854
No 62
>3phz_A Ricin B-related lectin; beta trefoil, saccharide binding lectin, 2,6-sialyl-lactosam sugar binding protein; HET: NAG GAL SIA; 1.70A {Polyporus squamosus}
Probab=43.48 E-value=31 Score=35.84 Aligned_cols=97 Identities=14% Similarity=0.318 Sum_probs=57.5
Q ss_pred EEEEEeccCCCccccCeeEEEecCCCCCCCcccccccceeEEEeCCCCceEeCCccCceeEEEEEECceeeeeeeeeEEE
Q 005706 387 SGRLLVQDSNDVISANGAYVGLAPPGDVGSWQTECKDYQFWTTADEDGCFSIKNIRTGNYNLYAWVPGFVGDYRSDALVT 466 (682)
Q Consensus 387 sG~v~~~D~~~~~pa~~a~V~L~~~~~~gs~q~~~k~yqYwt~td~~G~FtI~nVrpGtY~L~a~~~G~~G~~~~~~~Vt 466 (682)
+|+++...+. -.+.++.|.+ |...+...|-|+..+.+|.|+|.++..|.+ | .
T Consensus 67 SGKcLDV~g~--sTadGa~V~q--------W~~nGg~NQqW~l~~~~G~y~I~n~~SGkc-L-----------------D 118 (286)
T 3phz_A 67 AGSYMDLAGH--AATDGTAIIG--------YRPTGGDNQKWIISQINDVWKIKSKETGTF-V-----------------T 118 (286)
T ss_dssp TCCEEEEGGG--CCSTTEEEEE--------ECCCCCGGGCEEEEESSSCEEEEETTTCCE-E-----------------E
T ss_pred CCcEEEeCCC--cCCCCCeEEE--------eCCCCChhcEEEEEcCCCeEEEEECCCCcE-E-----------------E
Confidence 4665543321 2456788887 555556789998877789999999888853 1 1
Q ss_pred EeCCceeeecc-eEEcCC-CCCCCeeEEeccCCCcccc-----ccCCCCccc
Q 005706 467 ITSGSNIKMGD-LVYEPP-RDGPTLWEIGIPDRSAREF-----NVPDPDPKY 511 (682)
Q Consensus 467 V~aG~t~~lg~-l~~~~~-~~g~~LWeIGi~Drta~eF-----~~~d~~~~~ 511 (682)
|..|.++.-|. ..|+.. ....+.|++..-..++.++ ++|+..|.+
T Consensus 119 V~~gsttanGaV~qWt~~tgg~NQqW~~~~vs~tg~~i~~~l~~~p~~~~~~ 170 (286)
T 3phz_A 119 LLNGDGGGTGTVVGWQNITNNTSQNWTFQKLSQTGANVHATLLACPALRQDF 170 (286)
T ss_dssp EETC---CCCEEEEESCCCSSCTTCEEEEECEEEHHHHHHHHHHCTTTCSCC
T ss_pred eCCCCcCCCceEEEccCCCCCccCcEEEEEccCCcccceehhccCCccCCCE
Confidence 22222201111 245421 2567999998776666665 456666665
No 63
>3lpf_A Beta-glucuronidase; alpha/beta barrel, sugar-binding domain, beta-sandwich domai glycosyl hydrolase, glycosida hydrolase; HET: Z77; 2.26A {Escherichia coli} PDB: 3k46_A* 3k4d_A* 3lpg_A* 3k4a_A
Probab=42.93 E-value=21 Score=40.53 Aligned_cols=67 Identities=16% Similarity=0.146 Sum_probs=43.5
Q ss_pred EEEEEEeCCCCCCCcEEEEEEEeccCCCeEEEEEcCCCCCCCcccccccCCCCceecceeeeeeEEEEEEeeCCCeeeee
Q 005706 573 WQIKFKLDHVDRNSSYKLRVAIASATLAELQVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIEGE 652 (682)
Q Consensus 573 w~I~F~L~~~~~~~~~tLriala~a~~~~~~V~vN~~~~~~p~~~~~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~ 652 (682)
.+-+|.+++........|++.. ....-.|.|||+.++ .-.|-+..++|+|+ ..|+.|+
T Consensus 71 Y~~~f~~p~~~~~~~~~L~f~g---v~~~a~V~vNG~~vg------------------~~~~~~~p~~~dit-~~l~~G~ 128 (605)
T 3lpf_A 71 YQREVFIPKGWAGQRIVLRFDA---VTHYGKVWVNNQEVM------------------EHQGGYTPFEADVT-PYVIAGK 128 (605)
T ss_dssp EEEEEECCTTCSSCEEEEEESC---CBSEEEEEESSCEEE------------------EECCSSSCEEEECG-GGCCTTS
T ss_pred EEEEEECCcccCCCEEEEEECC---cceEEEEEECCEEEE------------------EEcCCCCcceeech-hhccCCC
Confidence 3456888765433345555543 345678999997542 11244567899998 7888998
Q ss_pred c-EEEEEeec
Q 005706 653 N-TIFLKQPR 661 (682)
Q Consensus 653 N-tI~lt~~~ 661 (682)
| +|++.+..
T Consensus 129 nn~l~V~v~n 138 (605)
T 3lpf_A 129 SVRITVCVNN 138 (605)
T ss_dssp EEEEEEEEEC
T ss_pred eEEEEEEEec
Confidence 6 89998843
No 64
>1cwv_A Invasin; integrin-binding protein, INV gene, structural protein; HET: CIT; 2.30A {Yersinia pseudotuberculosis} SCOP: b.1.14.1 b.1.14.1 b.1.14.1 b.1.14.1 d.169.1.3
Probab=41.92 E-value=1.2e+02 Score=33.46 Aligned_cols=74 Identities=18% Similarity=0.123 Sum_probs=48.1
Q ss_pred eEEEEEEEeccCCCccccCeeEEEecCCCCCCCcccccccceeEEEeCCCCceEeC--CccCceeEEEEEECceeeeeee
Q 005706 384 GCVSGRLLVQDSNDVISANGAYVGLAPPGDVGSWQTECKDYQFWTTADEDGCFSIK--NIRTGNYNLYAWVPGFVGDYRS 461 (682)
Q Consensus 384 GtVsG~v~~~D~~~~~pa~~a~V~L~~~~~~gs~q~~~k~yqYwt~td~~G~FtI~--nVrpGtY~L~a~~~G~~G~~~~ 461 (682)
-+++-+|+..+|+ |..+..|.+..++.. .-..--..||++|.+++. .-++|+|+++|..+|. .+
T Consensus 28 ~~ltatV~D~~Gn---pv~g~~Vtf~~~~g~-------~~~~~t~~Td~~G~a~~tltst~aG~~~VtAt~~g~----s~ 93 (492)
T 1cwv_A 28 ITVEFTVADFEGK---PLAGQEVVITTNNGA-------LPNKITEKTDANGVARIALTNTTDGVTVVTAEVEGQ----RQ 93 (492)
T ss_dssp EEEEEEEECTTSC---BCCSCEEEEECCTTC-------BSCEEEEECCTTSEEEEEEBCSSCEEEEEEEEETTE----EE
T ss_pred EEEEEEEEcCCCC---CCCCCEEEEEECCCc-------cccccceeeCCCceEEEEEEcCcceEEEEEEEECCc----cc
Confidence 4566666655564 777888887643211 111234578999987754 5689999999998773 23
Q ss_pred eeEEEEeCCc
Q 005706 462 DALVTITSGS 471 (682)
Q Consensus 462 ~~~VtV~aG~ 471 (682)
...|++.+|.
T Consensus 94 s~~v~f~a~~ 103 (492)
T 1cwv_A 94 SVDTHFVKGT 103 (492)
T ss_dssp EEEEEEECCC
T ss_pred eeEEEEeecc
Confidence 4456666664
No 65
>3cmg_A Putative beta-galactosidase; structural genomics, PSI-2, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides fragilis}
Probab=41.19 E-value=16 Score=41.93 Aligned_cols=68 Identities=13% Similarity=0.144 Sum_probs=45.2
Q ss_pred cEEEEEEeCCCCCCCcEEEEEEEeccCCCeEEEEEcCCCCCCCcccccccCCCCceecceeeeeeEEEEEEeeCCCeeee
Q 005706 572 TWQIKFKLDHVDRNSSYKLRVAIASATLAELQVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIEG 651 (682)
Q Consensus 572 ~w~I~F~L~~~~~~~~~tLriala~a~~~~~~V~vN~~~~~~p~~~~~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G 651 (682)
..+=+|.+++........|++..+ .....|.|||+.++ .-.|-+..++|+|.. .|+.|
T Consensus 52 wYr~~f~~p~~~~~~~~~L~f~gv---~~~a~V~vNG~~vg------------------~~~~~~~~~~~dit~-~l~~G 109 (667)
T 3cmg_A 52 NYEKALYIRPEWKGKRLFLRFDGV---NSIADVFINRKHIG------------------EHRGGYGAFIFEITD-LVKYG 109 (667)
T ss_dssp EEEEEEECCGGGTTSEEEEEESCC---BSEEEEEETTEEEE------------------EEECSSSCEEEECTT-TSCTT
T ss_pred EEEEEEECCcccCCCEEEEEECCc---cceeEEEECCEEEe------------------eecCCcccEEEECCH-HHCCC
Confidence 445578887643223355555432 45678999997543 112445678999986 68888
Q ss_pred -ecEEEEEeec
Q 005706 652 -ENTIFLKQPR 661 (682)
Q Consensus 652 -~NtI~lt~~~ 661 (682)
+|+|.+.+.+
T Consensus 110 ~~N~l~V~v~~ 120 (667)
T 3cmg_A 110 EKNSVLVRANN 120 (667)
T ss_dssp SEEEEEEEEEC
T ss_pred CCcEEEEEEec
Confidence 8999999865
No 66
>1yq2_A Beta-galactosidase; glycosyl hydrolase family 2, TIM barrel, hexamer; 1.90A {Arthrobacter SP} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3
Probab=40.01 E-value=17 Score=44.00 Aligned_cols=68 Identities=15% Similarity=0.195 Sum_probs=44.3
Q ss_pred cEEEEEEeCCCC--CC-CcEEEEEEEeccCCCeEEEEEcCCCCCCCcccccccCCCCceecceeeeeeEEEEEEeeCCCe
Q 005706 572 TWQIKFKLDHVD--RN-SSYKLRVAIASATLAELQVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRF 648 (682)
Q Consensus 572 ~w~I~F~L~~~~--~~-~~~tLriala~a~~~~~~V~vN~~~~~~p~~~~~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L 648 (682)
-.+=.|++++.. .. ....|++..+ .....|.|||+.++ .-.|-+..++|+|. ..|
T Consensus 121 wYrr~F~vp~~~~~~g~~rv~L~F~gv---~~~a~V~vNG~~VG------------------~~~gg~~p~~~DIT-~~L 178 (1024)
T 1yq2_A 121 DFRRRFDVPAQWFESTTAALTLRFDGV---ESRYKVWVNGQEIG------------------VGSGSRLAQEFDVS-DAL 178 (1024)
T ss_dssp EEEEEEEECGGGGSTTEEEEEEEESCE---ESCEEEEETTEEEE------------------EECCTTSCEEEECT-TTC
T ss_pred EEEEEeEECchHhcCCCceEEEEECCC---CceEEEEECCEEEE------------------EEeCCccceEEecH-Hhc
Confidence 345568887643 22 2344554433 34578999997543 01244567889998 678
Q ss_pred eeeecEEEEEeec
Q 005706 649 IEGENTIFLKQPR 661 (682)
Q Consensus 649 ~~G~NtI~lt~~~ 661 (682)
+.|+|+|.+.+.+
T Consensus 179 k~G~N~L~V~V~~ 191 (1024)
T 1yq2_A 179 RAGSNLLVVRVHQ 191 (1024)
T ss_dssp CSEEEEEEEEEES
T ss_pred cCCCcEEEEEEEe
Confidence 9999999999964
No 67
>3bga_A Beta-galactosidase; NYSGXRC, protein structure initiative II (PSI-II), glycosyl hydrolase family 2, jelly-roll fold; 2.10A {Bacteroides thetaiotaomicron vpi-5482} PDB: 3dec_A
Probab=39.11 E-value=17 Score=44.01 Aligned_cols=67 Identities=21% Similarity=0.123 Sum_probs=44.9
Q ss_pred EEEEEEeCCCCCCCcEEEEEEEeccCCCeEEEEEcCCCCCCCcccccccCCCCceecceeeeeeEEEEEEeeCCCeeeee
Q 005706 573 WQIKFKLDHVDRNSSYKLRVAIASATLAELQVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIEGE 652 (682)
Q Consensus 573 w~I~F~L~~~~~~~~~tLriala~a~~~~~~V~vN~~~~~~p~~~~~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~ 652 (682)
.+=.|++++........|++..+ .....|.|||+.++ .-.|-+..++|+|.. .|+.|+
T Consensus 130 Yrr~F~vp~~~~g~~v~L~F~gv---~~~a~V~vNG~~vG------------------~~~gg~~p~~~DIT~-~L~~G~ 187 (1010)
T 3bga_A 130 YRRTFKVPADWKGRRVVLCCEGV---ISFYYVWVNGKLLG------------------YNQGSKTAAEWDITD-VLSEGE 187 (1010)
T ss_dssp EEEEEECCGGGTTSEEEEEESCE---ESEEEEEETTEEEE------------------EEECSSSCEEEECGG-GCCSSE
T ss_pred EEEEeEeCcccCCCEEEEEECCC---CceeEEEECCEEEe------------------eEeCCCCcceeehhh-hccCCC
Confidence 45568887643233355555433 34678999997543 012446678999984 788999
Q ss_pred cEEEEEeec
Q 005706 653 NTIFLKQPR 661 (682)
Q Consensus 653 NtI~lt~~~ 661 (682)
|+|.+.+.+
T Consensus 188 N~L~V~V~~ 196 (1010)
T 3bga_A 188 NVVALEVYR 196 (1010)
T ss_dssp EEEEEEEES
T ss_pred cEEEEEEEe
Confidence 999999864
No 68
>3kpt_A Collagen adhesion protein; intramolecular amide bond, pilin subunit, beta sheet; 2.10A {Bacillus cereus atcc 14579} PDB: 3rkp_A
Probab=37.29 E-value=40 Score=35.61 Aligned_cols=51 Identities=22% Similarity=0.264 Sum_probs=34.4
Q ss_pred ccccCeeEEEecCCCCCCCcccccccceeEEEeCCCCceEeCCccCceeEEEEE
Q 005706 398 VISANGAYVGLAPPGDVGSWQTECKDYQFWTTADEDGCFSIKNIRTGNYNLYAW 451 (682)
Q Consensus 398 ~~pa~~a~V~L~~~~~~gs~q~~~k~yqYwt~td~~G~FtI~nVrpGtY~L~a~ 451 (682)
..+..+|...|... +|...... +...-..+|++|.|.|.++++|+|.|.=-
T Consensus 263 ~~~L~GA~F~l~~~--~g~~~~~~-~~~~~~~td~~G~~~~~~L~~G~Y~l~E~ 313 (355)
T 3kpt_A 263 KNKMKGAEFVLKDN--NGKIVVVA-GKEVTGVSDENGVIKWSNIPYGDYQIFET 313 (355)
T ss_dssp CCBCSCCEEEEEET--TSCBCBSS-SSBCEEECCTTSEEEEEEEESSEEEEEEE
T ss_pred CcccCCCEEEEEeC--CCCEEEec-cceEEEEECCCCeEEECcCCCceEEEEEE
Confidence 35788898888742 22222111 11123458999999999999999999866
No 69
>2pz4_A Protein GBS052; SPAB, GRAM-positive pilins, adhesions, IGG-like domain, cell adhesion; 1.80A {Streptococcus agalactiae} PDB: 3phs_A
Probab=36.09 E-value=14 Score=36.87 Aligned_cols=26 Identities=19% Similarity=0.201 Sum_probs=22.1
Q ss_pred EEEeCCCCceEeCCccCceeEEEEEE
Q 005706 427 WTTADEDGCFSIKNIRTGNYNLYAWV 452 (682)
Q Consensus 427 wt~td~~G~FtI~nVrpGtY~L~a~~ 452 (682)
-..||++|.++|.++++|+|.|.=..
T Consensus 71 ~~tTd~~G~~~~~~L~~G~Y~v~Et~ 96 (239)
T 2pz4_A 71 EATTNQQGKATFNQLPDGIYYGLAVK 96 (239)
T ss_dssp EEECCTTSEEEEEEEESEEEEEEEEE
T ss_pred EEEECCCCeEEECCCCCeeEEEEEEE
Confidence 34689999999999999999987543
No 70
>3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482}
Probab=35.56 E-value=21 Score=40.82 Aligned_cols=67 Identities=24% Similarity=0.332 Sum_probs=43.2
Q ss_pred ccEEEEEEeCCCCCCCcEEEEEEEeccCCCeEEEEEcCCCCCCCcccccccCCCCceecceeeeeeEEEEEEeeCCCeee
Q 005706 571 TTWQIKFKLDHVDRNSSYKLRVAIASATLAELQVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIE 650 (682)
Q Consensus 571 ~~w~I~F~L~~~~~~~~~tLriala~a~~~~~~V~vN~~~~~~p~~~~~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~ 650 (682)
+=.+-.|+++.. +. .+|-...-+.=+|.|||+.+++ -|.++- ..++| ||+++|++
T Consensus 509 ~~yk~~f~~~~~---~D----t~Ld~~g~gKG~vwVNG~nlGR----YW~~GP-----------qqtlY---vP~~~Lk~ 563 (612)
T 3d3a_A 509 AYYRSTFNLNEL---GD----TFLNMMNWSKGMVWVNGHAIGR----YWEIGP-----------QQTLY---VPGCWLKK 563 (612)
T ss_dssp EEEEEEEEESSC---CB----EEEECTTCCEEEEEETTEEEEE----EETTCS-----------CCEEE---ECGGGCCS
T ss_pred EEEEEEEECCCC---Cc----EEEecCCCCcEEEEECCEeEEe----EEecCC-----------EEEEE---ecHHHcCC
Confidence 335667887542 22 3344556788899999998863 343321 22344 99999999
Q ss_pred eecEEEEEeecC
Q 005706 651 GENTIFLKQPRC 662 (682)
Q Consensus 651 G~NtI~lt~~~g 662 (682)
|+|+|.|==..+
T Consensus 564 g~N~ivvfE~~~ 575 (612)
T 3d3a_A 564 GENEIIILDMAG 575 (612)
T ss_dssp EEEEEEEEESSC
T ss_pred CCcEEEEEEEcC
Confidence 999987754444
No 71
>3gm8_A Glycoside hydrolase family 2, candidate beta-GLYC; structural genomics, glycosidase, PSI-2, protein initiative; 2.40A {Bacteroides vulgatus}
Probab=34.59 E-value=24 Score=41.52 Aligned_cols=68 Identities=15% Similarity=0.196 Sum_probs=44.6
Q ss_pred EEEEEEeCCCCCCCcEEEEEEEeccCCCeEEEEEcCCCCCCCcccccccCCCCceecceeeeeeEEEEEEeeCCCeeeee
Q 005706 573 WQIKFKLDHVDRNSSYKLRVAIASATLAELQVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIEGE 652 (682)
Q Consensus 573 w~I~F~L~~~~~~~~~tLriala~a~~~~~~V~vN~~~~~~p~~~~~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~ 652 (682)
.+=+|++++........|++.. ......|.|||+.++ . -.|-+..++|+|+. .|+.|+
T Consensus 70 Yrk~f~vp~~~~~~~v~L~f~g---v~~~a~V~vNG~~vG----------~--------~~~g~~pf~~DIT~-~Lk~G~ 127 (801)
T 3gm8_A 70 YRKTFTIPSKWKNKKVQILFEG---VYLNSEVWINGHWLG----------K--------RPNGYISFVYDLTP-YLQEGK 127 (801)
T ss_dssp EEEEEECCSGGGSCEEEEEESC---CBSCEEEEETTEEEE----------E--------ECCSSCCEEEECGG-GCCSSE
T ss_pred EEEEEEcCcccCCCEEEEEECc---cceEEEEEECCEEee----------c--------ccCCcccEEEECcH-hccCCC
Confidence 4556888764433344455433 245678999997553 0 11345678999976 578999
Q ss_pred cEEEEEeecC
Q 005706 653 NTIFLKQPRC 662 (682)
Q Consensus 653 NtI~lt~~~g 662 (682)
|+|.+.+.+.
T Consensus 128 N~L~V~V~n~ 137 (801)
T 3gm8_A 128 NQIAVKVDHS 137 (801)
T ss_dssp EEEEEEEEEC
T ss_pred cEEEEEEECC
Confidence 9999998653
No 72
>3pe9_A Fibronectin(III)-like module; CBHA, beta-sandwich, cellulosome, unknown function; 1.69A {Clostridium thermocellum}
Probab=34.08 E-value=84 Score=27.22 Aligned_cols=44 Identities=11% Similarity=-0.019 Sum_probs=24.9
Q ss_pred ceeEEEeCCCCceEeCCccCceeEEEEEECceeeeeeeeeEEEEe
Q 005706 424 YQFWTTADEDGCFSIKNIRTGNYNLYAWVPGFVGDYRSDALVTIT 468 (682)
Q Consensus 424 yqYwt~td~~G~FtI~nVrpGtY~L~a~~~G~~G~~~~~~~VtV~ 468 (682)
...++.+..-=.|+.... +|+|+|++-+---.|.-.....|+|+
T Consensus 42 ~~vg~dt~apy~~~w~~~-~G~htl~a~AtD~~G~~~tS~~v~vt 85 (98)
T 3pe9_A 42 EVIGSDREAPYEYEWKAV-EGNHEISVIAYDDDDAASTPDSVKIF 85 (98)
T ss_dssp EEEEEECSSSEEEEEECC-SEEEEEEEEEEETTCCBCCCEEEEEE
T ss_pred EEecccccCCEEEEEEcC-CccEEEEEEEEECCCCEEeeeEEEEE
Confidence 444544433335666767 89999999863333433333344444
No 73
>4fxt_A Uncharacterized protein; PF12866 family, DUF3823, structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.77A {Bacteroides ovatus}
Probab=33.32 E-value=1.4e+02 Score=29.32 Aligned_cols=63 Identities=19% Similarity=0.334 Sum_probs=41.0
Q ss_pred CeEEEEEEEeccCCCc-cccCeeEEEecCCCCCCCcccccccceeEEEeCCCCceEeCCccCceeEEEEEECc
Q 005706 383 RGCVSGRLLVQDSNDV-ISANGAYVGLAPPGDVGSWQTECKDYQFWTTADEDGCFSIKNIRTGNYNLYAWVPG 454 (682)
Q Consensus 383 RGtVsG~v~~~D~~~~-~pa~~a~V~L~~~~~~gs~q~~~k~yqYwt~td~~G~FtI~nVrpGtY~L~a~~~G 454 (682)
-++++|+|. -+|+.. ....++-+-|.+.| |.. .+.|.+. ...+|.|+ ..+=.|+|+|..--.|
T Consensus 7 ~a~l~G~iv-~tgE~i~~~~~gv~i~l~e~g----~~~--~~~~~~~-v~qDGtf~-~~lF~G~Yki~~~~nG 70 (202)
T 4fxt_A 7 KATLTGKAI-YDGEAVGVRSGSSEFALFQDG----YAL--KGSIPVY-IAQDGSYS-VSLFNGDYKLVRMGNA 70 (202)
T ss_dssp EEEEEEEEE-ETTEECBCCTTTEEEEEECCC----------CCEEEE-BCTTSEEE-EEEESEEEEEEEEETC
T ss_pred CceEEEEEE-ECCCEeeecCCceEEEEEEcc----cCC--CCCeeEE-EcCCCcEE-EEEEcceeEEEECCCC
Confidence 378999998 344311 22346788886543 442 2445553 78899999 8999999999955445
No 74
>3hn5_A Putative exported protein BF0290; YP_210027.1, structural genomics, joint center for S genomics, JCSG; HET: MSE; 1.70A {Bacteroides fragilis nctc 9343}
Probab=32.89 E-value=1.1e+02 Score=30.58 Aligned_cols=60 Identities=18% Similarity=0.359 Sum_probs=40.9
Q ss_pred CeEEEEEEEeccCCC--ccccCeeEEEecCCCCCCCcccccccceeEEEeCCCCceEeCCccCceeEEEEE
Q 005706 383 RGCVSGRLLVQDSND--VISANGAYVGLAPPGDVGSWQTECKDYQFWTTADEDGCFSIKNIRTGNYNLYAW 451 (682)
Q Consensus 383 RGtVsG~v~~~D~~~--~~pa~~a~V~L~~~~~~gs~q~~~k~yqYwt~td~~G~FtI~nVrpGtY~L~a~ 451 (682)
-.+++|+|. -.|+. .....++-|-|.+.| |.. .+.|.+. ...+|.|+ ..+=.|+|+|..-
T Consensus 10 ~a~l~G~iv-~tGE~i~~~~~~gv~i~l~E~g----y~~--~~~~~~~-v~qDGtf~-~~lF~G~Yki~~~ 71 (215)
T 3hn5_A 10 ESMLTGRVM-YNGEALQLRGNEAVQLQLYQHG----YAK--HDPINVY-VNQDGMYS-ANLFDGEYQMITK 71 (215)
T ss_dssp CEEEEEEEE-ETTEECCCCCTTSCEEEEESSC----GGG--CCCEEEE-BCTTSEEE-EEECSEEEEEEEC
T ss_pred CceEEEEEE-ECCCEeeecCCCceEEEEEEcc----cCC--CCCeeEE-EcCCCcEE-EEEECceeEEEEe
Confidence 479999998 34431 112234788886643 553 2445553 78899999 7899999999984
No 75
>2wyh_A Alpha-mannosidase; hydrolase, glycosidase, glycoside hydrolase; 1.90A {Streptococcus pyogenes} PDB: 2wyi_A*
Probab=32.13 E-value=3.6e+02 Score=31.94 Aligned_cols=129 Identities=19% Similarity=0.281 Sum_probs=67.2
Q ss_pred cccCccccccEEEEEeC-------------cEEEEECCeEEEEEeCCCeeEEEEEE--cCee--cccccccCCCcceeeE
Q 005706 47 STWPAMPTQAVRLHIKD-------------HHVVLDNGILQVTLSKPGGIVTGIRY--NGID--NLLEFRNKETNRGYWD 109 (682)
Q Consensus 47 ~~~~~~~~a~~~~~~~g-------------~~~vidNg~l~vtv~k~~G~itsi~y--~G~e--nll~~~~~~~~~gY~D 109 (682)
+-.|++....+.+.... ...+|+|+.+.|+|++. |.+ ||.= +|.+ +++-+..... .||
T Consensus 520 a~vP~lG~~~~~i~~~~~~~~~~~~~~~~~~~~~leN~~~~v~~d~~-G~l-si~dk~~gr~~~~~~~y~d~~d---~~d 594 (923)
T 2wyh_A 520 ITLPAMSWKTLALKLGNETTPSETVSLYDDSNQCLENGFLKVMIQTD-GRL-TITDKQSGLIYQDLLRFEDCGD---IGN 594 (923)
T ss_dssp EEECTTEEEEEEEEEEC------CCCSEETTTTEEECSSEEEEECTT-SCE-EEEETTTCCEEEEESEEEEEEC---CSC
T ss_pred EEcCCcceEEEEEEECCCcccccccccccCCCceEecCeEEEEEeCC-CCE-EEEECCCCeEEEEEEEEeecCC---CCC
Confidence 34666665555554221 22589999999999874 886 7742 3443 1111111111 122
Q ss_pred EEe-CCCCCCCcee-eeccceEEEEEecCCEEEEEEEEeec-CC-------------------CCC---CcccceeeEEE
Q 005706 110 LMW-NPPGGKGMFD-VISGTSFRVVVENEEQVELSFLRTWA-SS-------------------HEG---NYIPLNIDKRF 164 (682)
Q Consensus 110 ~~w-~~~g~~g~~~-~~~gt~~~vi~~~~~~i~Vs~~~~~~-~s-------------------~~g---~~~~l~l~~~~ 164 (682)
.+. .+.+....+. .....+++|+++++-..+|.+...+. |. ..+ ..+++.|.+.+
T Consensus 595 ay~f~p~~~~~~~~~~~~~~~i~v~~~gpl~~~v~~~~~~~vP~~~~~~L~~~~~~~~~~~~r~~~~s~~~~~~~i~q~i 674 (923)
T 2wyh_A 595 EYISRQPNHDQPFYADQGTIKLNIISNTAQVAELEIQQTFAIPISADKLLQAEMEAVIDITERQARRSQEKAELTLTTLI 674 (923)
T ss_dssp SSCCCCCTTCCCEEGGGSEEEEEEEEECSSEEEEEEEEEEEEESSBCTHHHHHHHTTCCGGGCCCCBCSCEEEEEEEEEE
T ss_pred eeEEEcCCCCceeeccCCCceEEEEEcCCCEEEEEEEEEecCCccchhhhccccccccchhhhhhcccccccceEEEEEE
Confidence 221 1221111111 11235677777777555555554331 10 001 12356799999
Q ss_pred EEecCCceeEEEEEee
Q 005706 165 IMLRGSSGFYSYAIYE 180 (682)
Q Consensus 165 v~r~G~sgiY~y~~~~ 180 (682)
.|.+|.+-|-.-+.+.
T Consensus 675 ~L~~~~~~ie~~~~vd 690 (923)
T 2wyh_A 675 RMEKNNPRLQFTTRFD 690 (923)
T ss_dssp EEETTCSCEEEEEEEE
T ss_pred EEeCCCceEEEEEEEC
Confidence 9999998887755553
No 76
>3uaf_A TTR-52; beta barrel/sandwich, cell engulfment, secreted, protein BIN; 2.01A {Caenorhabditis elegans}
Probab=31.84 E-value=53 Score=29.54 Aligned_cols=50 Identities=18% Similarity=0.143 Sum_probs=29.4
Q ss_pred CeEEEEEEEeccCCCccccC--eeEEEecCCCCCCCcccccccceeEEEeCCCCceEeC
Q 005706 383 RGCVSGRLLVQDSNDVISAN--GAYVGLAPPGDVGSWQTECKDYQFWTTADEDGCFSIK 439 (682)
Q Consensus 383 RGtVsG~v~~~D~~~~~pa~--~a~V~L~~~~~~gs~q~~~k~yqYwt~td~~G~FtI~ 439 (682)
--.|+|+|.=.. +||. ++.|-|.+.... -.+....---+.||++|+|+|.
T Consensus 4 sV~V~G~L~C~~----~Pa~~~~V~V~L~d~~~~---~~d~Ddll~~~~Td~~G~F~l~ 55 (117)
T 3uaf_A 4 CLMATGVLKCPT----DPEAVKKVHIDLWDAAAA---AAESDDLMGRTWSDRNGNFQVT 55 (117)
T ss_dssp EEEEEEEEECTT----CGGGGSSCEEEEEEHHHH---HTTSCCEEEEEECCTTSEEEEE
T ss_pred EEEEEEEEEeCC----ccCCCCCEEEEEEecccc---cCCchHhheeeEECCCCEEEEE
Confidence 457999998643 3755 788888420000 0011222223678999999986
No 77
>3blc_A Inner membrane protein OXAA; YIDC, membrane assembly facilitator, chaperone, periplasmic inner membrane, transmembrane; 2.50A {Escherichia coli K12}
Probab=31.17 E-value=31 Score=36.04 Aligned_cols=31 Identities=16% Similarity=0.263 Sum_probs=26.3
Q ss_pred EeCcEEEEECCeEEEEEeCCCeeEEEEEEcC
Q 005706 61 IKDHHVVLDNGILQVTLSKPGGIVTGIRYNG 91 (682)
Q Consensus 61 ~~g~~~vidNg~l~vtv~k~~G~itsi~y~G 91 (682)
-.+..|+|+|+.|.++|+..+|+|.++.++.
T Consensus 32 ~~~~~i~V~td~l~~~is~~GG~I~~~~Lk~ 62 (330)
T 3blc_A 32 GQGKLISVKTDVLDLTINTRGGDVEQALLPA 62 (330)
T ss_dssp -CCCEEEEECSSCEEEEETBTCCEEEEEEEE
T ss_pred CCCCEEEEECCcEEEEEECCCCEEeEEECCC
Confidence 4456799999999999999999999997654
No 78
>1jz7_A Lactase, beta-galactosidase, LACZ; TIM barrel (alpha/beta barrel), jelly-roll barrel, immunoglobulin, beta supersandwich, hydrolase; HET: GAL; 1.50A {Escherichia coli} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 PDB: 1hn1_A 1jyx_A* 1jz3_A* 1jz4_A* 1jz5_A* 1jz6_A* 1dp0_A* 3iap_A* 1jz8_A* 1jyn_A* 1jyv_A* 1jyw_A* 3iaq_A* 1px3_A 1px4_A* 3czj_A* 3i3e_A 3i3d_A* 3i3b_A 3dym_A ...
Probab=30.85 E-value=42 Score=40.69 Aligned_cols=37 Identities=11% Similarity=0.231 Sum_probs=33.4
Q ss_pred EEEeCcEEEEECCeEEEEEeCCCeeEEEEEEcCeeccc
Q 005706 59 LHIKDHHVVLDNGILQVTLSKPGGIVTGIRYNGIDNLL 96 (682)
Q Consensus 59 ~~~~g~~~vidNg~l~vtv~k~~G~itsi~y~G~enll 96 (682)
+++++..++|.++.++++|+|.+|.++|++++|.| ||
T Consensus 740 ~~~~~~~~~v~~~~~~~~f~~~~G~l~s~~~~g~~-~l 776 (1023)
T 1jz7_A 740 LTTSEMDFCIELGNKRWQFNRQSGFLSQMWIGDKK-QL 776 (1023)
T ss_dssp EEECSSEEEEEETTEEEEEETTTCSEEEEEETTEE-CE
T ss_pred ceecCceEEEEECCEEEEEECCcceEEEEEECCEE-ee
Confidence 66788899999888999999999999999999998 44
No 79
>1jz7_A Lactase, beta-galactosidase, LACZ; TIM barrel (alpha/beta barrel), jelly-roll barrel, immunoglobulin, beta supersandwich, hydrolase; HET: GAL; 1.50A {Escherichia coli} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 PDB: 1hn1_A 1jyx_A* 1jz3_A* 1jz4_A* 1jz5_A* 1jz6_A* 1dp0_A* 3iap_A* 1jz8_A* 1jyn_A* 1jyv_A* 1jyw_A* 3iaq_A* 1px3_A 1px4_A* 3czj_A* 3i3e_A 3i3d_A* 3i3b_A 3dym_A ...
Probab=30.60 E-value=20 Score=43.40 Aligned_cols=68 Identities=12% Similarity=0.109 Sum_probs=44.6
Q ss_pred cEEEEEEeCCCCC-CCcEEEEEEEeccCCCeEEEEEcCCCCCCCcccccccCCCCceecceeeeeeEEEEEEeeCCCeee
Q 005706 572 TWQIKFKLDHVDR-NSSYKLRVAIASATLAELQVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIE 650 (682)
Q Consensus 572 ~w~I~F~L~~~~~-~~~~tLriala~a~~~~~~V~vN~~~~~~p~~~~~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~ 650 (682)
..+-.|++++... .....|++..+ .....|.|||+.++ . -.|-+..++|+|.. .|+.
T Consensus 122 ~Yrr~F~vp~~~~~~~~v~L~F~gv---~~~a~V~vNG~~vG----------------~--~~gg~~p~~~DIT~-~L~~ 179 (1023)
T 1jz7_A 122 CYSLTFNVDESWLQEGQTRIIFDGV---NSAFHLWCNGRWVG----------------Y--GQDSRLPSEFDLSA-FLRA 179 (1023)
T ss_dssp EEEEEEEECHHHHHSSEEEEEESCE---ESEEEEEETTEEEE----------------E--EECTTSCEEEECTT-TCCS
T ss_pred EEEEEEEeCchhcCCCEEEEEECCC---CcceEEEECCEEEc----------------c--ccCCCCceEEecHh-hccC
Confidence 4556788865322 23355555433 34678999997543 0 12344578899976 7889
Q ss_pred eecEEEEEeec
Q 005706 651 GENTIFLKQPR 661 (682)
Q Consensus 651 G~NtI~lt~~~ 661 (682)
|+|+|.+.+.+
T Consensus 180 G~N~L~V~V~~ 190 (1023)
T 1jz7_A 180 GENRLAVMVLR 190 (1023)
T ss_dssp EEEEEEEEEES
T ss_pred CCcEEEEEEEe
Confidence 99999999864
No 80
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=30.53 E-value=52 Score=37.50 Aligned_cols=26 Identities=27% Similarity=0.620 Sum_probs=23.5
Q ss_pred EEEeCCCCceEeCCccCceeEEEEEE
Q 005706 427 WTTADEDGCFSIKNIRTGNYNLYAWV 452 (682)
Q Consensus 427 wt~td~~G~FtI~nVrpGtY~L~a~~ 452 (682)
|..+.....-++.|++||+|+|.|-+
T Consensus 731 W~~~~~~~~~~ytnL~pG~Y~f~V~a 756 (781)
T 3v9f_A 731 WYTINEQNSVTFRNIPPGKYEFLVKA 756 (781)
T ss_dssp EEEESSCSEEEECSCCSEEEEEEEEE
T ss_pred ccCcCCcceEEEcCCCCceEEEEEEE
Confidence 88888788899999999999999975
No 81
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=27.43 E-value=47 Score=37.93 Aligned_cols=26 Identities=19% Similarity=0.419 Sum_probs=22.9
Q ss_pred EEEeCCCCceEeCCccCceeEEEEEE
Q 005706 427 WTTADEDGCFSIKNIRTGNYNLYAWV 452 (682)
Q Consensus 427 wt~td~~G~FtI~nVrpGtY~L~a~~ 452 (682)
|..+.....-+..|++||+|+|.|.+
T Consensus 737 W~~~~~~~~~~ytnL~pG~Y~f~V~a 762 (795)
T 4a2l_A 737 WYYLTDSRTVSYSNLPQGTYQFLVKA 762 (795)
T ss_dssp CEEESSCCEEEEECCCSEEEEEEEEE
T ss_pred ccCCCCcCeEEecccCCCeEEEEEEE
Confidence 77777777899999999999999976
No 82
>3oba_A Beta-galactosidase; TIM barrel, tetramer, GH2, glycosidase, hydrolase; 2.75A {Kluyveromyces lactis} PDB: 3ob8_A
Probab=26.21 E-value=23 Score=42.93 Aligned_cols=68 Identities=21% Similarity=0.152 Sum_probs=43.4
Q ss_pred cEEEEEEeCCCC-CCCcEEEEEEEeccCCCeEEEEEcCCCCCCCcccccccCCCCceecceeeeeeEEEEEEeeCCCeee
Q 005706 572 TWQIKFKLDHVD-RNSSYKLRVAIASATLAELQVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIE 650 (682)
Q Consensus 572 ~w~I~F~L~~~~-~~~~~tLriala~a~~~~~~V~vN~~~~~~p~~~~~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~ 650 (682)
-.+=+|++++.. ......|++.. ......|.|||+.++ .-.|-+..++|+|+. .|+.
T Consensus 115 ~Yrr~f~vp~~~~~~~~v~L~F~g---v~~~a~V~vNG~~vG------------------~~~gg~~p~~~DIT~-~lk~ 172 (1032)
T 3oba_A 115 VYARTFELDSKSIESFEHRLRFEG---VDNCYELYVNGQYVG------------------FNKGSRNGAEFDIQK-YVSE 172 (1032)
T ss_dssp EEEEEEEECHHHHHHEEEEEEESC---EESEEEEEETTEEEE------------------EEECTTSCEEEECTT-TCCS
T ss_pred EEEEEEEECchhcCCCEEEEEECC---cceeEEEEECCEEEE------------------EEeCCcccEEEEChh-hccC
Confidence 345568886532 22234444432 235678999997543 112445678999987 6789
Q ss_pred eecEEEEEeec
Q 005706 651 GENTIFLKQPR 661 (682)
Q Consensus 651 G~NtI~lt~~~ 661 (682)
|+|+|.+.+.+
T Consensus 173 G~N~L~V~V~~ 183 (1032)
T 3oba_A 173 GENLVVVKVFK 183 (1032)
T ss_dssp EEEEEEEEEES
T ss_pred CcEEEEEEEEC
Confidence 99999999865
No 83
>3og2_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family 35, glycoprot hydrolase; HET: NAG BMA MAN GLC; 1.20A {Trichoderma reesei} PDB: 3ogr_A* 3ogs_A* 3ogv_A*
Probab=25.74 E-value=60 Score=39.20 Aligned_cols=44 Identities=16% Similarity=0.064 Sum_probs=31.6
Q ss_pred CCeEEEEEcCCCCCCCcccccccCCCCceecceeeeeeEEEEEEeeCCCee-eeecEEEEEe
Q 005706 599 LAELQVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFI-EGENTIFLKQ 659 (682)
Q Consensus 599 ~~~~~V~vN~~~~~~p~~~~~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~-~G~NtI~lt~ 659 (682)
.-|.|+.|||...+. +.+. -| -..+|.||.+.|. .|+|+|-|++
T Consensus 916 ~yRa~lfVNG~q~Gk-------yv~~--------iG--PQt~FpvP~GILn~~G~Ntialal 960 (1003)
T 3og2_A 916 PYRALLYVNGFQYGK-------YVSN--------IG--PQTEFPVPEGILDYNGDNWIGVAL 960 (1003)
T ss_dssp CEEEEEEETTEEEEE-------EETT--------TC--CCCEEEECBTTBCTEEEEEEEEEE
T ss_pred ceEEEEEEeceeeee-------ecCC--------CC--CcceecCCcccccCCCcceEEEEE
Confidence 359999999964431 1000 01 2357999999999 8999999998
No 84
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=25.42 E-value=57 Score=37.03 Aligned_cols=27 Identities=22% Similarity=0.342 Sum_probs=21.5
Q ss_pred EEEeC-CCCceEeCCccCceeEEEEEEC
Q 005706 427 WTTAD-EDGCFSIKNIRTGNYNLYAWVP 453 (682)
Q Consensus 427 wt~td-~~G~FtI~nVrpGtY~L~a~~~ 453 (682)
|..++ ....-++.|++||+|+|.|.+.
T Consensus 702 W~~~~~~~~~~~ytnL~pG~Y~f~V~a~ 729 (758)
T 3ott_A 702 WNFLKSNINRITYSNLSYGNYQLIISKL 729 (758)
T ss_dssp CEECCTTCCEEEECSCCSEEEEEEEEEB
T ss_pred ccCCCCCcceEEecCCCCccEEEEEEEe
Confidence 66665 3456889999999999999863
No 85
>4e8d_A Glycosyl hydrolase, family 35; TIM barrel, beta-propeller, glycohydrolase; 1.80A {Streptococcus pneumoniae} PDB: 4e8c_A
Probab=25.10 E-value=21 Score=40.76 Aligned_cols=43 Identities=30% Similarity=0.354 Sum_probs=28.8
Q ss_pred CCCeEEEEEcCCCCCCCcccccccCCCCceecceeeeeeEEEEEEeeCCCeeeeecEEEEE
Q 005706 598 TLAELQVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIEGENTIFLK 658 (682)
Q Consensus 598 ~~~~~~V~vN~~~~~~p~~~~~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~NtI~lt 658 (682)
.-+.=.|.|||..+++ -|.+|- ...+| ||+.+|++|+|+|.+=
T Consensus 527 gwgKG~v~VNG~nLGR----YW~~GP-----------Q~tLY---vP~~~Lk~G~NeIvvf 569 (595)
T 4e8d_A 527 EFGKGVAFVNGQNLGR----FWNVGP-----------TLSLY---IPHSYLKEGANRIIIF 569 (595)
T ss_dssp TCCEEEEEETTEEEEE----EETTCS-----------BCEEE---ECGGGSCSEEEEEEEE
T ss_pred CCceEEEEECCeeeec----ccCCCC-----------eEEEE---ecHHHhCcCCceEEEE
Confidence 4467789999987762 232221 12344 9999999999987643
No 86
>4eiu_A Uncharacterized hypothetical protein; PF12866 family protein, DUF3823, structural genomics, joint for structural genomics, JCSG; HET: PGE; 1.90A {Bacteroides uniformis}
Probab=21.78 E-value=4.6e+02 Score=26.56 Aligned_cols=63 Identities=21% Similarity=0.305 Sum_probs=41.9
Q ss_pred CeEEEEEEEecc-CCCcc---ccCeeEEEecCCCCCCCcccccccce-eEEEeCCCCceEeCCccCceeEEEEE
Q 005706 383 RGCVSGRLLVQD-SNDVI---SANGAYVGLAPPGDVGSWQTECKDYQ-FWTTADEDGCFSIKNIRTGNYNLYAW 451 (682)
Q Consensus 383 RGtVsG~v~~~D-~~~~~---pa~~a~V~L~~~~~~gs~q~~~k~yq-Ywt~td~~G~FtI~nVrpGtY~L~a~ 451 (682)
-++++|+|.-.. |+... ...++-|-|.+.+ |.. +.+.| .+ ....+|.|+=..+=.|+|+|..-
T Consensus 9 ~s~l~G~ivd~~tGE~i~~~~g~~gv~i~l~E~g----~~~-~~~~~~~~-~v~~DGtf~Nt~lF~G~Yki~~~ 76 (249)
T 4eiu_A 9 SETIWGEVVDEATGKRVLTDQGSEGIRVRLTELS----WGD-NVQHNPDF-YCMMDGTFQNTKIFKGEYNVRID 76 (249)
T ss_dssp CEEEEEEEEETTTCCBCCCCSSTTSCEEEEEECC----SSC-CBCCSCCE-ECCTTSEEEEEEECSEEEEEEEE
T ss_pred cceeEEEEEECCCCCEeeeccCCCceEEEEEecc----ccc-CCCccCCE-EECCCCceeeeeEEcceeEEEeC
Confidence 479999998753 33221 1235788886532 543 22344 44 47889999966799999999985
No 87
>1b4r_A Protein (PKD1_human); PKD domain 1 from human polycystein-1, polycystin (precursor), membrane protein; NMR {Homo sapiens} SCOP: b.1.3.1
Probab=21.61 E-value=83 Score=26.34 Aligned_cols=28 Identities=18% Similarity=0.156 Sum_probs=15.1
Q ss_pred ccCceeEEEEEECceeeeeeeeeEEEEe
Q 005706 441 IRTGNYNLYAWVPGFVGDYRSDALVTIT 468 (682)
Q Consensus 441 VrpGtY~L~a~~~G~~G~~~~~~~VtV~ 468 (682)
-+||+|++.+-+.--.+.-.....|+|+
T Consensus 52 ~~~G~YtV~Ltv~~g~~~~~a~~~V~V~ 79 (80)
T 1b4r_A 52 VLPGRYHVTAVLALGAGSALLGTDVQVE 79 (80)
T ss_dssp CSSEEEEEEEEEECSSCEEEEEEEEEEB
T ss_pred CCCcEEEEEEEEEeCCceEEEEEEEEEE
Confidence 3788888877653111222334456665
No 88
>2x9z_A RRGB, cell WALL surface anchor family protein; cell adhesion; 1.30A {Streptococcus pneumoniae}
Probab=21.35 E-value=1.4e+02 Score=30.08 Aligned_cols=61 Identities=15% Similarity=0.181 Sum_probs=35.4
Q ss_pred CeEEEEEEEeccCCCccccCeeE--EEecCCCCCCCcccccccceeEEEeCCCCceEeCCc-cCceeEEEE
Q 005706 383 RGCVSGRLLVQDSNDVISANGAY--VGLAPPGDVGSWQTECKDYQFWTTADEDGCFSIKNI-RTGNYNLYA 450 (682)
Q Consensus 383 RGtVsG~v~~~D~~~~~pa~~a~--V~L~~~~~~gs~q~~~k~yqYwt~td~~G~FtI~nV-rpGtY~L~a 450 (682)
.|.+.-+=.-.|+....+..+|. .-|..... +.| ....+.++++|.|+|..+ ++|+|.|.=
T Consensus 156 ~~~~~~~K~d~~~~~~~~L~GA~~~F~l~~~~~-~~~------~~~~~~t~~~g~~~~~gLd~~g~Y~l~E 219 (262)
T 2x9z_A 156 NGDLTLTKTWVDATGAPIPAGAEATFDLVNAQA-GKV------VQTVTLTTDKNTVTVNGLDKNTEYKFVE 219 (262)
T ss_dssp TSCEEEEEEEECTTSCBCCCCSCEEEEEEETTT-CCE------EEEEEECTTCSEEEECSCCTTSCEEEEE
T ss_pred cccEEEEEEcCCCCcccCcCCcEEEEEEEECCC-CcE------EEEEEecCCceEEEEeCCCCCCCEEEEE
Confidence 35565432223343223556644 67754221 112 122333789999999999 799999874
No 89
>3nbc_A Ricin B-like lectin; lactose, sugar BIND protein; HET: LAT; 1.01A {Clitocybe nebularis} PDB: 3nbd_A* 3nbe_A*
Probab=20.60 E-value=50 Score=30.73 Aligned_cols=49 Identities=14% Similarity=0.158 Sum_probs=30.8
Q ss_pred EEEEEeccCCCccccCeeEEEecCCCCCCCccccccccee----EEEeC-CC---CceEeCCccCceeE
Q 005706 387 SGRLLVQDSNDVISANGAYVGLAPPGDVGSWQTECKDYQF----WTTAD-ED---GCFSIKNIRTGNYN 447 (682)
Q Consensus 387 sG~v~~~D~~~~~pa~~a~V~L~~~~~~gs~q~~~k~yqY----wt~td-~~---G~FtI~nVrpGtY~ 447 (682)
+|+++...+. -.+.++.|.. |...+...|. |+-++ .+ |.|+|.|+ |+|-
T Consensus 15 sgk~lDv~~~--sta~Gt~V~~--------w~~~g~~nQ~~~~~W~~~~~~~~~~g~y~i~n~--G~~L 71 (148)
T 3nbc_A 15 TNRLIDLTGS--NPAENTLIIG--------HHLNKTPSGYGNQQWTLVQLPHTTIYTMQAVNP--QSYV 71 (148)
T ss_dssp TTCEEEEGGG--CCSTTEEEEE--------ECCCSTTTCCGGGCEEEEECTTSSEEEEEESSS--CCEE
T ss_pred CCCeEECCCC--cCCCCcEEEE--------eCCCCChhheeecEEEEEECCCcccceEEEEEC--CcEE
Confidence 4554433321 2456777776 4444455666 98776 56 99999999 8753
Done!