Query 005708
Match_columns 681
No_of_seqs 327 out of 3520
Neff 10.2
Searched_HMMs 13730
Date Mon Mar 25 05:12:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005708.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/005708hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2omza2 c.10.2.1 (A:33-416) In 99.9 4.8E-20 3.5E-24 190.4 26.6 80 427-523 304-383 (384)
2 d2omza2 c.10.2.1 (A:33-416) In 99.9 3.7E-20 2.7E-24 191.2 25.1 145 369-549 239-383 (384)
3 d1p9ag_ c.10.2.7 (G:) von Will 99.8 5.7E-18 4.2E-22 164.5 18.0 195 34-243 8-205 (266)
4 d1xkua_ c.10.2.7 (A:) Decorin 99.7 3.7E-17 2.7E-21 162.5 20.9 264 60-408 12-283 (305)
5 d1xkua_ c.10.2.7 (A:) Decorin 99.7 2.3E-16 1.7E-20 156.6 24.3 171 36-224 31-208 (305)
6 d1ozna_ c.10.2.7 (A:) Reticulo 99.7 8.5E-17 6.2E-21 157.9 17.6 207 23-243 20-235 (284)
7 d1p9ag_ c.10.2.7 (G:) von Will 99.7 8.2E-17 6E-21 156.2 17.1 184 23-223 19-207 (266)
8 d1jl5a_ c.10.2.6 (A:) Leucine 99.7 5.2E-15 3.8E-19 150.0 30.4 135 37-187 39-173 (353)
9 d1h6ta2 c.10.2.1 (A:31-240) In 99.7 9.6E-17 7E-21 149.5 15.1 166 34-220 44-209 (210)
10 d2omxa2 c.10.2.1 (A:37-235) In 99.7 1.6E-16 1.2E-20 146.6 16.1 147 33-187 37-183 (199)
11 d1ogqa_ c.10.2.8 (A:) Polygala 99.7 6E-17 4.3E-21 161.6 13.9 173 37-223 51-233 (313)
12 d1h6ua2 c.10.2.1 (A:36-262) In 99.7 3.2E-16 2.4E-20 148.1 17.7 195 27-242 32-226 (227)
13 d2omxa2 c.10.2.1 (A:37-235) In 99.7 1.7E-16 1.2E-20 146.4 15.3 178 40-238 22-199 (199)
14 d1h6ta2 c.10.2.1 (A:31-240) In 99.7 3.3E-16 2.4E-20 145.8 15.4 166 56-242 44-209 (210)
15 d1jl5a_ c.10.2.6 (A:) Leucine 99.7 2E-14 1.4E-18 145.6 28.6 141 58-227 38-178 (353)
16 d1ozna_ c.10.2.7 (A:) Reticulo 99.7 1.3E-15 9.6E-20 149.3 18.5 197 40-249 15-217 (284)
17 d1ogqa_ c.10.2.8 (A:) Polygala 99.7 1.1E-16 7.8E-21 159.7 10.6 201 31-245 71-280 (313)
18 d1h6ua2 c.10.2.1 (A:36-262) In 99.6 1.6E-14 1.2E-18 136.1 19.1 180 20-220 47-226 (227)
19 d1dcea3 c.10.2.2 (A:444-567) R 99.5 2.4E-14 1.7E-18 119.9 12.4 118 61-181 1-122 (124)
20 d1a9na_ c.10.2.4 (A:) Spliceso 99.5 2.1E-14 1.5E-18 126.7 7.8 123 56-182 16-145 (162)
21 d2astb2 c.10.1.3 (B:2136-2419) 99.5 8E-14 5.8E-18 135.9 10.3 123 61-186 3-131 (284)
22 d1dcea3 c.10.2.2 (A:444-567) R 99.4 1.9E-13 1.4E-17 114.4 10.9 115 39-156 1-122 (124)
23 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.4 5.5E-13 4E-17 121.7 12.9 124 39-164 11-139 (192)
24 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.4 6.5E-13 4.7E-17 126.4 13.8 191 23-229 17-219 (242)
25 d2astb2 c.10.1.3 (B:2136-2419) 99.4 5.1E-14 3.7E-18 137.3 5.4 190 314-549 45-235 (284)
26 d1a9na_ c.10.2.4 (A:) Spliceso 99.4 4.8E-13 3.5E-17 117.8 10.5 130 78-217 14-145 (162)
27 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.4 6E-12 4.3E-16 119.6 16.3 198 39-250 11-218 (242)
28 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.3 2.2E-12 1.6E-16 117.5 11.6 124 60-188 10-138 (192)
29 d1m9la_ c.10.3.1 (A:) Outer ar 99.2 5.4E-14 3.9E-18 128.6 -6.0 107 78-188 44-152 (198)
30 d1z7xw1 c.10.1.1 (W:1-460) Rib 99.1 1E-12 7.4E-17 137.9 -3.3 102 59-161 3-122 (460)
31 d1m9la_ c.10.3.1 (A:) Outer ar 99.0 9.2E-12 6.7E-16 113.5 -0.3 127 83-223 24-152 (198)
32 d2ifga3 c.10.2.7 (A:36-191) Hi 98.9 2.3E-09 1.7E-13 93.0 11.4 100 40-140 12-115 (156)
33 d1z7xw1 c.10.1.1 (W:1-460) Rib 98.9 1.2E-10 9E-15 121.6 3.6 386 37-442 3-438 (460)
34 d2ifga3 c.10.2.7 (A:36-191) Hi 98.9 2.2E-09 1.6E-13 93.1 10.5 99 87-187 13-114 (156)
35 d2ca6a1 c.10.1.2 (A:2-345) Rna 98.8 8.5E-10 6.2E-14 110.4 5.4 184 32-223 27-255 (344)
36 d2ca6a1 c.10.1.2 (A:2-345) Rna 98.6 4.7E-09 3.4E-13 104.8 3.6 208 31-247 54-316 (344)
37 d1koha1 c.10.2.3 (A:201-362) m 97.7 6.2E-07 4.5E-11 77.8 -3.6 82 75-157 58-152 (162)
38 d1koha1 c.10.2.3 (A:201-362) m 97.7 1.3E-06 9.4E-11 75.7 -2.4 82 100-182 60-152 (162)
39 d1pgva_ c.10.1.1 (A:) Tropomod 97.0 0.00032 2.3E-08 60.4 5.3 38 79-116 41-83 (167)
40 d1pgva_ c.10.1.1 (A:) Tropomod 96.9 0.00039 2.9E-08 59.8 5.1 38 79-116 12-55 (167)
41 d1io0a_ c.10.1.1 (A:) Tropomod 96.5 0.0011 8.2E-08 56.8 5.3 90 126-221 44-142 (166)
42 d1io0a_ c.10.1.1 (A:) Tropomod 96.1 0.0017 1.2E-07 55.6 3.9 85 101-187 42-143 (166)
No 1
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.85 E-value=4.8e-20 Score=190.41 Aligned_cols=80 Identities=16% Similarity=0.218 Sum_probs=42.7
Q ss_pred cccCccCEEeeccCCCcccccCCCCCcccccccceeeeccCCccccccccccccceeeceeecccccceeEEEeccCCCC
Q 005708 427 ELFSSLEKLTLIDLPRMTDIWKGDTQFVSLHNLKKVRVQDCDELRQVFPTNLGKKAAVEEMVPYRKRRDHIHIHATTSTS 506 (681)
Q Consensus 427 ~~~~~L~~L~l~~~~~L~~~~~~~~~~~~l~~L~~L~i~~c~~l~~~~~~~l~~~~~L~~L~l~~~~l~~l~~~~~~~~~ 506 (681)
..+++++.|.++++ +++.+. ++..+++|++|++++| +++.+ + .++.+++|+.|++++|+++++ +.
T Consensus 304 ~~~~~l~~L~ls~n-~l~~l~----~l~~l~~L~~L~L~~n-~l~~l-~-~l~~l~~L~~L~l~~N~l~~l----~~--- 368 (384)
T d2omza2 304 SNLKNLTYLTLYFN-NISDIS----PVSSLTKLQRLFFANN-KVSDV-S-SLANLTNINWLSAGHNQISDL----TP--- 368 (384)
T ss_dssp GGCTTCSEEECCSS-CCSCCG----GGGGCTTCCEEECCSS-CCCCC-G-GGGGCTTCCEEECCSSCCCBC----GG---
T ss_pred chhcccCeEECCCC-CCCCCc----ccccCCCCCEEECCCC-CCCCC-h-hHcCCCCCCEEECCCCcCCCC----hh---
Confidence 34455555555543 223221 1345566666666655 34443 2 355566666666666655554 21
Q ss_pred CCCCCCCCccEEEEecC
Q 005708 507 SPTPSLGNLVSITIRGC 523 (681)
Q Consensus 507 ~~~~~~~~L~~L~i~~c 523 (681)
+..+++|+.|+|+++
T Consensus 369 --l~~l~~L~~L~L~~N 383 (384)
T d2omza2 369 --LANLTRITQLGLNDQ 383 (384)
T ss_dssp --GTTCTTCSEEECCCE
T ss_pred --hccCCCCCEeeCCCC
Confidence 446677777777653
No 2
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.85 E-value=3.7e-20 Score=191.22 Aligned_cols=145 Identities=16% Similarity=0.292 Sum_probs=93.3
Q ss_pred cCCCccEEEEeeCCCCCccccchHHhhcCCCcEEEEeeccCcceeecccccccccccccccCccCEEeeccCCCcccccC
Q 005708 369 CLSNVKRLDVGDCGSMLKILPSHLVQSFQNLQRLRVGRCELLESVFEIERVNIAKEETELFSSLEKLTLIDLPRMTDIWK 448 (681)
Q Consensus 369 ~~~~L~~L~l~~c~~l~~~~~~~~~~~l~~L~~L~l~~c~~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~L~~~~~ 448 (681)
.+++|+.|++.++ .++.+.+ +..+++|++|+++++.. ..++ ....++.++.+.+.++. +..+.
T Consensus 239 ~l~~L~~L~l~~n-~l~~~~~---~~~~~~L~~L~l~~~~l-~~~~----------~~~~~~~l~~l~~~~n~-l~~~~- 301 (384)
T d2omza2 239 SLTNLTDLDLANN-QISNLAP---LSGLTKLTELKLGANQI-SNIS----------PLAGLTALTNLELNENQ-LEDIS- 301 (384)
T ss_dssp GCTTCSEEECCSS-CCCCCGG---GTTCTTCSEEECCSSCC-CCCG----------GGTTCTTCSEEECCSSC-CSCCG-
T ss_pred cccccchhccccC-ccCCCCc---ccccccCCEeeccCccc-CCCC----------ccccccccccccccccc-ccccc-
Confidence 4456666666664 3444422 34466777777766432 2221 13456666777666543 22221
Q ss_pred CCCCcccccccceeeeccCCccccccccccccceeeceeecccccceeEEEeccCCCCCCCCCCCCccEEEEecCCCcce
Q 005708 449 GDTQFVSLHNLKKVRVQDCDELRQVFPTNLGKKAAVEEMVPYRKRRDHIHIHATTSTSSPTPSLGNLVSITIRGCGQLRQ 528 (681)
Q Consensus 449 ~~~~~~~l~~L~~L~i~~c~~l~~~~~~~l~~~~~L~~L~l~~~~l~~l~~~~~~~~~~~~~~~~~L~~L~i~~c~~l~~ 528 (681)
.+..+++++.|+++++ +++.+. .+..+++|++|++++|+++.+ +. +..+++|++|++++| +++.
T Consensus 302 ---~~~~~~~l~~L~ls~n-~l~~l~--~l~~l~~L~~L~L~~n~l~~l----~~-----l~~l~~L~~L~l~~N-~l~~ 365 (384)
T d2omza2 302 ---PISNLKNLTYLTLYFN-NISDIS--PVSSLTKLQRLFFANNKVSDV----SS-----LANLTNINWLSAGHN-QISD 365 (384)
T ss_dssp ---GGGGCTTCSEEECCSS-CCSCCG--GGGGCTTCCEEECCSSCCCCC----GG-----GGGCTTCCEEECCSS-CCCB
T ss_pred ---ccchhcccCeEECCCC-CCCCCc--ccccCCCCCEEECCCCCCCCC----hh-----HcCCCCCCEEECCCC-cCCC
Confidence 2356788888988886 566652 367788899999999977766 31 557889999999877 5777
Q ss_pred ecchhhHhhhccccEeEEccc
Q 005708 529 LFTTSMVKSLVRLESLEVSSC 549 (681)
Q Consensus 529 l~~~~~~~~l~~L~~L~i~~C 549 (681)
+++ +.++++|+.|+|++.
T Consensus 366 l~~---l~~l~~L~~L~L~~N 383 (384)
T d2omza2 366 LTP---LANLTRITQLGLNDQ 383 (384)
T ss_dssp CGG---GTTCTTCSEEECCCE
T ss_pred Chh---hccCCCCCEeeCCCC
Confidence 644 578889999988864
No 3
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.76 E-value=5.7e-18 Score=164.51 Aligned_cols=195 Identities=22% Similarity=0.230 Sum_probs=158.4
Q ss_pred CCCCccEEEccCCCCccCCCCCCCCCCcEEEccCCCCCCCChHHHhCCCCccEEEecCCCCCCCCccccCCCCCcEEEcc
Q 005708 34 TFEDLTGISLMFNDIHEVPDELECPKLQALFLQENSPLAIPDRFFQGMKDLKVLDLGGIRGFSLPSSLSFLINLRTLSLH 113 (681)
Q Consensus 34 ~l~~lr~L~l~~~~~~~l~~~~~~~~Lr~L~l~~~~~~~l~~~~~~~l~~Lr~L~L~~~~~~~lp~~i~~l~~L~~L~L~ 113 (681)
....+..++.+++.++.+|..+. +++++|++++|.+..++.+.|.++++|++|+|++|++..+|. ++.+++|++|+++
T Consensus 8 ~~~~~~~v~C~~~~L~~iP~~lp-~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~l~~-~~~l~~L~~L~Ls 85 (266)
T d1p9ag_ 8 KVASHLEVNCDKRNLTALPPDLP-KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV-DGTLPVLGTLDLS 85 (266)
T ss_dssp CSTTCCEEECTTSCCSSCCSCCC-TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC-CSCCTTCCEEECC
T ss_pred ccCCCeEEEccCCCCCeeCcCcC-cCCCEEECcCCcCCCcCHHHhhcccccccccccccccccccc-ccccccccccccc
Confidence 44566678888888888887653 689999999999999888778999999999999999987764 5788999999999
Q ss_pred CCCCCCCCc-ccCCCCCccEEEcccCCCcccch-hhcCCccCcEEeccCCCCCCccChhhhcCCCCCcEEEcccCccccc
Q 005708 114 DCRRFGDLP-LIGELSLLEILDLSESDVSEIPV-SFGRLGHLRLLDLTDCVHLELIPRDVLSSLRKLEELYMSHSFCHWQ 191 (681)
Q Consensus 114 ~~~~~~~l~-~l~~L~~L~~L~l~~~~i~~lp~-~i~~l~~L~~L~L~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~ 191 (681)
+|+ ++.++ .+.++++|++|+++++.+..++. .+..+.++++|++++| .+..++...+..+++|+.|++++|.+.
T Consensus 86 ~N~-l~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n-~l~~l~~~~~~~l~~l~~l~l~~N~l~-- 161 (266)
T d1p9ag_ 86 HNQ-LQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGN-ELKTLPPGLLTPTPKLEKLSLANNNLT-- 161 (266)
T ss_dssp SSC-CSSCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTS-CCCCCCTTTTTTCTTCCEEECTTSCCS--
T ss_pred ccc-ccccccccccccccccccccccccceeecccccccccccccccccc-ccceeccccccccccchhccccccccc--
Confidence 998 66665 78889999999999998887654 5678889999999985 566777776788999999999888642
Q ss_pred ccchhhhhhccchhhhcCCCCCcEEEEeCCCCCCCCCC-CCCCCccEEEEEec
Q 005708 192 FESEEDARSNAKFIELGALSRLTSLHIDIPKGKIMPSD-MSFQNLTSFSIKIG 243 (681)
Q Consensus 192 ~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~-~~l~~L~~L~l~~~ 243 (681)
...+..++.+++|++|++++|.+..+|.. ..+++|+.|.+.++
T Consensus 162 ---------~~~~~~~~~l~~L~~L~Ls~N~L~~lp~~~~~~~~L~~L~L~~N 205 (266)
T d1p9ag_ 162 ---------ELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGN 205 (266)
T ss_dssp ---------CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCCCSEEECCSC
T ss_pred ---------ccCccccccccccceeecccCCCcccChhHCCCCCCCEEEecCC
Confidence 12345578899999999999999888876 67788888888764
No 4
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.74 E-value=3.7e-17 Score=162.51 Aligned_cols=264 Identities=16% Similarity=0.167 Sum_probs=138.7
Q ss_pred CcEEEccCCCCCCCChHHHhCCCCccEEEecCCCCCCCCc-cccCCCCCcEEEccCCCCCCCC-c-ccCCCCCccEEEcc
Q 005708 60 LQALFLQENSPLAIPDRFFQGMKDLKVLDLGGIRGFSLPS-SLSFLINLRTLSLHDCRRFGDL-P-LIGELSLLEILDLS 136 (681)
Q Consensus 60 Lr~L~l~~~~~~~l~~~~~~~l~~Lr~L~L~~~~~~~lp~-~i~~l~~L~~L~L~~~~~~~~l-~-~l~~L~~L~~L~l~ 136 (681)
.++++.++..++++|.++ .+++++|+|++|++..+|+ +|.++++|++|++++|. +..+ | .+.++++|++|+++
T Consensus 12 ~~~~~C~~~~L~~lP~~l---~~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~-~~~i~~~~f~~l~~L~~L~l~ 87 (305)
T d1xkua_ 12 LRVVQCSDLGLEKVPKDL---PPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNK-ISKISPGAFAPLVKLERLYLS 87 (305)
T ss_dssp TTEEECTTSCCCSCCCSC---CTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSC-CCCBCTTTTTTCTTCCEEECC
T ss_pred CCEEEecCCCCCccCCCC---CCCCCEEECcCCcCCCcChhHhhcccccccccccccc-ccccchhhhhCCCccCEeccc
Confidence 344555555555555432 2345555555555555543 35555555555555555 3333 2 45556666666666
Q ss_pred cCCCcccchhhcCCccCcEEeccCCCCCCccChhhhcCCCCCcEEEcccCcccccccchhhhhhccchhhhcCCCCCcEE
Q 005708 137 ESDVSEIPVSFGRLGHLRLLDLTDCVHLELIPRDVLSSLRKLEELYMSHSFCHWQFESEEDARSNAKFIELGALSRLTSL 216 (681)
Q Consensus 137 ~~~i~~lp~~i~~l~~L~~L~L~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~l~~l~~L~~L 216 (681)
+|+++.+|..+ ...++.|.+.++ .+..++...+.....+..+....+... ........+..+++|+.+
T Consensus 88 ~n~l~~l~~~~--~~~l~~L~~~~n-~l~~l~~~~~~~~~~~~~l~~~~n~~~---------~~~~~~~~~~~l~~L~~l 155 (305)
T d1xkua_ 88 KNQLKELPEKM--PKTLQELRVHEN-EITKVRKSVFNGLNQMIVVELGTNPLK---------SSGIENGAFQGMKKLSYI 155 (305)
T ss_dssp SSCCSBCCSSC--CTTCCEEECCSS-CCCBBCHHHHTTCTTCCEEECCSSCCC---------GGGBCTTGGGGCTTCCEE
T ss_pred CCccCcCccch--hhhhhhhhcccc-chhhhhhhhhhcccccccccccccccc---------ccCCCccccccccccCcc
Confidence 66666555432 345666666653 344555544555566666665544321 112233456667777777
Q ss_pred EEeCCCCCCCCCCCCCCCccEEEEEecCCcCCCchhHHHHHhhhccccccceeeeccccchhhhHHHHHHHHhccceeec
Q 005708 217 HIDIPKGKIMPSDMSFQNLTSFSIKIGDLEEDPLSDFIELFLEKFNKRCSRAMGLSQDMRISALHSWIKNLLLRSEILAL 296 (681)
Q Consensus 217 ~l~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~~~~~L~~L~l 296 (681)
++.++.+..++.. .+++|+.|++.++
T Consensus 156 ~l~~n~l~~l~~~-~~~~L~~L~l~~n----------------------------------------------------- 181 (305)
T d1xkua_ 156 RIADTNITTIPQG-LPPSLTELHLDGN----------------------------------------------------- 181 (305)
T ss_dssp ECCSSCCCSCCSS-CCTTCSEEECTTS-----------------------------------------------------
T ss_pred ccccCCccccCcc-cCCccCEEECCCC-----------------------------------------------------
Confidence 7777766555432 2344444443322
Q ss_pred ccccCcccccccccccccCCCcEEEEEecCCceEeeeccccccccccCccceeeecccccccccccCcCCCCcCCCccEE
Q 005708 297 AEVNDLENMVSDLANDGFNELMFLVIVRCNEMKCLVNSLERTRRVTLHKLEWLAIFLNQNLVEICHGQLPAGCLSNVKRL 376 (681)
Q Consensus 297 ~~~~~~~~~~~~l~~~~~~~L~~L~l~~~~~l~~l~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~~~L~~L 376 (681)
.........+ ..++.+++|.++++ .+..++.. ....+++|++|+++++ +++.++. ....+++|+.|
T Consensus 182 ---~~~~~~~~~~--~~~~~l~~L~~s~n-~l~~~~~~----~~~~l~~L~~L~L~~N-~L~~lp~---~l~~l~~L~~L 247 (305)
T d1xkua_ 182 ---KITKVDAASL--KGLNNLAKLGLSFN-SISAVDNG----SLANTPHLRELHLNNN-KLVKVPG---GLADHKYIQVV 247 (305)
T ss_dssp ---CCCEECTGGG--TTCTTCCEEECCSS-CCCEECTT----TGGGSTTCCEEECCSS-CCSSCCT---TTTTCSSCCEE
T ss_pred ---cCCCCChhHh--hccccccccccccc-cccccccc----cccccccceeeecccc-ccccccc---ccccccCCCEE
Confidence 2111111111 22556666666666 45444332 3455667777777776 4444321 12356777777
Q ss_pred EEeeCCCCCccccc-----hHHhhcCCCcEEEEeecc
Q 005708 377 DVGDCGSMLKILPS-----HLVQSFQNLQRLRVGRCE 408 (681)
Q Consensus 377 ~l~~c~~l~~~~~~-----~~~~~l~~L~~L~l~~c~ 408 (681)
+++++ +++.+... ......++|+.|++++++
T Consensus 248 ~Ls~N-~i~~i~~~~f~~~~~~~~~~~L~~L~L~~N~ 283 (305)
T d1xkua_ 248 YLHNN-NISAIGSNDFCPPGYNTKKASYSGVSLFSNP 283 (305)
T ss_dssp ECCSS-CCCCCCTTSSSCSSCCTTSCCCSEEECCSSS
T ss_pred ECCCC-ccCccChhhccCcchhcccCCCCEEECCCCc
Confidence 77773 56655321 223456788888888765
No 5
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.73 E-value=2.3e-16 Score=156.61 Aligned_cols=171 Identities=20% Similarity=0.262 Sum_probs=82.7
Q ss_pred CCccEEEccCCCCccCCCC-C-CCCCCcEEEccCCCCCCCChHHHhCCCCccEEEecCCCCCCCCccccCCCCCcEEEcc
Q 005708 36 EDLTGISLMFNDIHEVPDE-L-ECPKLQALFLQENSPLAIPDRFFQGMKDLKVLDLGGIRGFSLPSSLSFLINLRTLSLH 113 (681)
Q Consensus 36 ~~lr~L~l~~~~~~~l~~~-~-~~~~Lr~L~l~~~~~~~l~~~~~~~l~~Lr~L~L~~~~~~~lp~~i~~l~~L~~L~L~ 113 (681)
+++++|++++|.++.+++. + .+++|++|++++|.+..+++..|..+++|++|++++|++..+|..+ ...++.|++.
T Consensus 31 ~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~n~l~~l~~~~--~~~l~~L~~~ 108 (305)
T d1xkua_ 31 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKELPEKM--PKTLQELRVH 108 (305)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCSBCCSSC--CTTCCEEECC
T ss_pred CCCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhhhCCCccCEecccCCccCcCccch--hhhhhhhhcc
Confidence 4555555555555555432 2 4555555555555555554444555555555555555555555432 2345555555
Q ss_pred CCCCCCCCc--ccCCCCCccEEEcccCCCc---ccchhhcCCccCcEEeccCCCCCCccChhhhcCCCCCcEEEcccCcc
Q 005708 114 DCRRFGDLP--LIGELSLLEILDLSESDVS---EIPVSFGRLGHLRLLDLTDCVHLELIPRDVLSSLRKLEELYMSHSFC 188 (681)
Q Consensus 114 ~~~~~~~l~--~l~~L~~L~~L~l~~~~i~---~lp~~i~~l~~L~~L~L~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~ 188 (681)
++. +..++ .+.....++.++...+... ..+..+..+++|+++++++|. +..+|.. .+++|++|++++|..
T Consensus 109 ~n~-l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l~~L~~l~l~~n~-l~~l~~~---~~~~L~~L~l~~n~~ 183 (305)
T d1xkua_ 109 ENE-ITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTN-ITTIPQG---LPPSLTELHLDGNKI 183 (305)
T ss_dssp SSC-CCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSC-CCSCCSS---CCTTCSEEECTTSCC
T ss_pred ccc-hhhhhhhhhhccccccccccccccccccCCCccccccccccCccccccCC-ccccCcc---cCCccCEEECCCCcC
Confidence 554 34443 3444455555555444322 123344455555555555532 2334332 234555555555432
Q ss_pred cccccchhhhhhccchhhhcCCCCCcEEEEeCCCCC
Q 005708 189 HWQFESEEDARSNAKFIELGALSRLTSLHIDIPKGK 224 (681)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~ 224 (681)
....+..+..++.++.|++++|.+.
T Consensus 184 -----------~~~~~~~~~~~~~l~~L~~s~n~l~ 208 (305)
T d1xkua_ 184 -----------TKVDAASLKGLNNLAKLGLSFNSIS 208 (305)
T ss_dssp -----------CEECTGGGTTCTTCCEEECCSSCCC
T ss_pred -----------CCCChhHhhcccccccccccccccc
Confidence 1122334455555555555555443
No 6
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.71 E-value=8.5e-17 Score=157.93 Aligned_cols=207 Identities=25% Similarity=0.346 Sum_probs=162.9
Q ss_pred CCcccCCCCCCCCCCccEEEccCCCCccCCCCC--CCCCCcEEEccCCCCCCCChHHHhCCCCccEEEecC-CCCCCC-C
Q 005708 23 GVELKDWPSINTFEDLTGISLMFNDIHEVPDEL--ECPKLQALFLQENSPLAIPDRFFQGMKDLKVLDLGG-IRGFSL-P 98 (681)
Q Consensus 23 ~~~~~~~~~~~~l~~lr~L~l~~~~~~~l~~~~--~~~~Lr~L~l~~~~~~~l~~~~~~~l~~Lr~L~L~~-~~~~~l-p 98 (681)
+.+++.+|. .-...++.|++++|.++.++... .+++|++|++++|.+..++...+..+..++.+.... +.+..+ |
T Consensus 20 ~~~L~~iP~-~ip~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~~~l~~ 98 (284)
T d1ozna_ 20 QQGLQAVPV-GIPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDP 98 (284)
T ss_dssp SSCCSSCCT-TCCTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCT
T ss_pred CCCCCccCC-CCCCCCCEEECcCCcCCCCCHHHhhccccccccccccccccccccccccccccccccccccccccccccc
Confidence 344677764 22357899999999998887643 889999999999999888887788889999888764 455555 5
Q ss_pred ccccCCCCCcEEEccCCCCCCCCc--ccCCCCCccEEEcccCCCcccch-hhcCCccCcEEeccCCCCCCccChhhhcCC
Q 005708 99 SSLSFLINLRTLSLHDCRRFGDLP--LIGELSLLEILDLSESDVSEIPV-SFGRLGHLRLLDLTDCVHLELIPRDVLSSL 175 (681)
Q Consensus 99 ~~i~~l~~L~~L~L~~~~~~~~l~--~l~~L~~L~~L~l~~~~i~~lp~-~i~~l~~L~~L~L~~~~~~~~~~~~~l~~l 175 (681)
..++++++|++|++++|. ...++ .++...+|+.+++++|.++.+|. .+..+++|++|++++| .+..++...+.++
T Consensus 99 ~~~~~l~~L~~L~l~~n~-~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N-~l~~l~~~~f~~l 176 (284)
T d1ozna_ 99 ATFHGLGRLHTLHLDRCG-LQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGN-RISSVPERAFRGL 176 (284)
T ss_dssp TTTTTCTTCCEEECTTSC-CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS-CCCEECTTTTTTC
T ss_pred hhhcccccCCEEecCCcc-cccccccccchhcccchhhhccccccccChhHhccccchhhcccccC-cccccchhhhccc
Confidence 668889999999999988 55554 67888899999999999988864 5778889999999995 4567777668889
Q ss_pred CCCcEEEcccCcccccccchhhhhhccchhhhcCCCCCcEEEEeCCCCCCCCCC--CCCCCccEEEEEec
Q 005708 176 RKLEELYMSHSFCHWQFESEEDARSNAKFIELGALSRLTSLHIDIPKGKIMPSD--MSFQNLTSFSIKIG 243 (681)
Q Consensus 176 ~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~--~~l~~L~~L~l~~~ 243 (681)
++|+++++.+|... ...+..+..+++|++|++++|.+..++.. ..+++|+.+++.++
T Consensus 177 ~~L~~l~l~~N~l~-----------~i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~N 235 (284)
T d1ozna_ 177 HSLDRLLLHQNRVA-----------HVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDN 235 (284)
T ss_dssp TTCCEEECCSSCCC-----------EECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSS
T ss_pred cccchhhhhhcccc-----------ccChhHhhhhhhcccccccccccccccccccccccccCEEEecCC
Confidence 99999999888642 23466788899999999999988777654 56777888877653
No 7
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.71 E-value=8.2e-17 Score=156.19 Aligned_cols=184 Identities=21% Similarity=0.149 Sum_probs=157.5
Q ss_pred CCcccCCCCCCCCCCccEEEccCCCCccCCCC-C-CCCCCcEEEccCCCCCCCChHHHhCCCCccEEEecCCCCCCCCcc
Q 005708 23 GVELKDWPSINTFEDLTGISLMFNDIHEVPDE-L-ECPKLQALFLQENSPLAIPDRFFQGMKDLKVLDLGGIRGFSLPSS 100 (681)
Q Consensus 23 ~~~~~~~~~~~~l~~lr~L~l~~~~~~~l~~~-~-~~~~Lr~L~l~~~~~~~l~~~~~~~l~~Lr~L~L~~~~~~~lp~~ 100 (681)
+.++..+|.- -.+++++|++++|.++.++.. + .+++|++|++++|.++.++. ++.+++|++|++++|++...+..
T Consensus 19 ~~~L~~iP~~-lp~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~l~~--~~~l~~L~~L~Ls~N~l~~~~~~ 95 (266)
T d1p9ag_ 19 KRNLTALPPD-LPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV--DGTLPVLGTLDLSHNQLQSLPLL 95 (266)
T ss_dssp TSCCSSCCSC-CCTTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC--CSCCTTCCEEECCSSCCSSCCCC
T ss_pred CCCCCeeCcC-cCcCCCEEECcCCcCCCcCHHHhhcccccccccccccccccccc--ccccccccccccccccccccccc
Confidence 4557778741 125799999999999988754 3 89999999999999998875 68899999999999999999999
Q ss_pred ccCCCCCcEEEccCCCCCCCCc--ccCCCCCccEEEcccCCCcccchh-hcCCccCcEEeccCCCCCCccChhhhcCCCC
Q 005708 101 LSFLINLRTLSLHDCRRFGDLP--LIGELSLLEILDLSESDVSEIPVS-FGRLGHLRLLDLTDCVHLELIPRDVLSSLRK 177 (681)
Q Consensus 101 i~~l~~L~~L~L~~~~~~~~l~--~l~~L~~L~~L~l~~~~i~~lp~~-i~~l~~L~~L~L~~~~~~~~~~~~~l~~l~~ 177 (681)
+.++++|++|+++++. ...++ .+..+.++++|++++|.++.+|.. +..+++|+++++++| .+..++.+.+..+++
T Consensus 96 ~~~l~~L~~L~l~~~~-~~~~~~~~~~~l~~l~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~~N-~l~~~~~~~~~~l~~ 173 (266)
T d1p9ag_ 96 GQTLPALTVLDVSFNR-LTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANN-NLTELPAGLLNGLEN 173 (266)
T ss_dssp TTTCTTCCEEECCSSC-CCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTS-CCSCCCTTTTTTCTT
T ss_pred cccccccccccccccc-cceeeccccccccccccccccccccceeccccccccccchhcccccc-cccccCccccccccc
Confidence 9999999999999998 55554 788999999999999999988764 677999999999995 466777776899999
Q ss_pred CcEEEcccCcccccccchhhhhhccchhhhcCCCCCcEEEEeCCCC
Q 005708 178 LEELYMSHSFCHWQFESEEDARSNAKFIELGALSRLTSLHIDIPKG 223 (681)
Q Consensus 178 L~~L~l~~~~~~~~~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~ 223 (681)
|++|++++|.+ ..++.++..+++|+.|++++|..
T Consensus 174 L~~L~Ls~N~L------------~~lp~~~~~~~~L~~L~L~~Np~ 207 (266)
T d1p9ag_ 174 LDTLLLQENSL------------YTIPKGFFGSHLLPFAFLHGNPW 207 (266)
T ss_dssp CCEEECCSSCC------------CCCCTTTTTTCCCSEEECCSCCB
T ss_pred cceeecccCCC------------cccChhHCCCCCCCEEEecCCCC
Confidence 99999999964 25667788899999999999864
No 8
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.70 E-value=5.2e-15 Score=149.96 Aligned_cols=135 Identities=20% Similarity=0.267 Sum_probs=92.8
Q ss_pred CccEEEccCCCCccCCCCCCCCCCcEEEccCCCCCCCChHHHhCCCCccEEEecCCCCCCCCccccCCCCCcEEEccCCC
Q 005708 37 DLTGISLMFNDIHEVPDELECPKLQALFLQENSPLAIPDRFFQGMKDLKVLDLGGIRGFSLPSSLSFLINLRTLSLHDCR 116 (681)
Q Consensus 37 ~lr~L~l~~~~~~~l~~~~~~~~Lr~L~l~~~~~~~l~~~~~~~l~~Lr~L~L~~~~~~~lp~~i~~l~~L~~L~L~~~~ 116 (681)
++++|+++++.++.+|+. .++|++|++++|.++++|.. ..+|+.|++++|++..++... ..|++|++++|.
T Consensus 39 ~l~~LdLs~~~L~~lp~~--~~~L~~L~Ls~N~l~~lp~~----~~~L~~L~l~~n~l~~l~~lp---~~L~~L~L~~n~ 109 (353)
T d1jl5a_ 39 QAHELELNNLGLSSLPEL--PPHLESLVASCNSLTELPEL----PQSLKSLLVDNNNLKALSDLP---PLLEYLGVSNNQ 109 (353)
T ss_dssp TCSEEECTTSCCSCCCSC--CTTCSEEECCSSCCSSCCCC----CTTCCEEECCSSCCSCCCSCC---TTCCEEECCSSC
T ss_pred CCCEEEeCCCCCCCCCCC--CCCCCEEECCCCCCcccccc----hhhhhhhhhhhcccchhhhhc---cccccccccccc
Confidence 577888888888877753 46788888888888888742 457888888888877665421 358888888887
Q ss_pred CCCCCcccCCCCCccEEEcccCCCcccchhhcCCccCcEEeccCCCCCCccChhhhcCCCCCcEEEcccCc
Q 005708 117 RFGDLPLIGELSLLEILDLSESDVSEIPVSFGRLGHLRLLDLTDCVHLELIPRDVLSSLRKLEELYMSHSF 187 (681)
Q Consensus 117 ~~~~l~~l~~L~~L~~L~l~~~~i~~lp~~i~~l~~L~~L~L~~~~~~~~~~~~~l~~l~~L~~L~l~~~~ 187 (681)
+..+|.++++++|++|+++++.+...|.. ...+..+.+..+... .... +..++.++.|.+.++.
T Consensus 110 -l~~lp~~~~l~~L~~L~l~~~~~~~~~~~---~~~l~~l~~~~~~~~-~~~~--l~~l~~l~~L~l~~n~ 173 (353)
T d1jl5a_ 110 -LEKLPELQNSSFLKIIDVDNNSLKKLPDL---PPSLEFIAAGNNQLE-ELPE--LQNLPFLTAIYADNNS 173 (353)
T ss_dssp -CSSCCCCTTCTTCCEEECCSSCCSCCCCC---CTTCCEEECCSSCCS-SCCC--CTTCTTCCEEECCSSC
T ss_pred -cccccchhhhccceeeccccccccccccc---cccccchhhcccccc-cccc--ccccccceeccccccc
Confidence 77777777888888888888777766543 345555665553322 2211 5667777777776653
No 9
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.69 E-value=9.6e-17 Score=149.45 Aligned_cols=166 Identities=28% Similarity=0.343 Sum_probs=116.8
Q ss_pred CCCCccEEEccCCCCccCCCCCCCCCCcEEEccCCCCCCCChHHHhCCCCccEEEecCCCCCCCCccccCCCCCcEEEcc
Q 005708 34 TFEDLTGISLMFNDIHEVPDELECPKLQALFLQENSPLAIPDRFFQGMKDLKVLDLGGIRGFSLPSSLSFLINLRTLSLH 113 (681)
Q Consensus 34 ~l~~lr~L~l~~~~~~~l~~~~~~~~Lr~L~l~~~~~~~l~~~~~~~l~~Lr~L~L~~~~~~~lp~~i~~l~~L~~L~L~ 113 (681)
.+.++++|+++++.+..++....+++|++|++++|.+..+++ ++.+++|++|++++|++..+| .+.++++|+.|+++
T Consensus 44 ~L~~L~~L~l~~~~i~~l~~l~~l~~L~~L~L~~n~i~~l~~--~~~l~~L~~L~l~~n~i~~l~-~l~~l~~L~~L~l~ 120 (210)
T d1h6ta2 44 ELNSIDQIIANNSDIKSVQGIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKDLS-SLKDLKKLKSLSLE 120 (210)
T ss_dssp HHHTCCEEECTTSCCCCCTTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCGG-GGTTCTTCCEEECT
T ss_pred HhcCccEEECcCCCCCCchhHhhCCCCCEEeCCCccccCccc--cccCccccccccccccccccc-cccccccccccccc
Confidence 455677788887777776654467778888888887777764 567777888888877777766 46777778888887
Q ss_pred CCCCCCCCcccCCCCCccEEEcccCCCcccchhhcCCccCcEEeccCCCCCCccChhhhcCCCCCcEEEcccCccccccc
Q 005708 114 DCRRFGDLPLIGELSLLEILDLSESDVSEIPVSFGRLGHLRLLDLTDCVHLELIPRDVLSSLRKLEELYMSHSFCHWQFE 193 (681)
Q Consensus 114 ~~~~~~~l~~l~~L~~L~~L~l~~~~i~~lp~~i~~l~~L~~L~L~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~ 193 (681)
+|. ...++.+.++++|+.++++++.++..+ .+..+++|+++++++|. +..+++ +.++++|++|++++|.+
T Consensus 121 ~~~-~~~~~~l~~l~~l~~l~~~~n~l~~~~-~~~~l~~L~~l~l~~n~-l~~i~~--l~~l~~L~~L~Ls~N~i----- 190 (210)
T d1h6ta2 121 HNG-ISDINGLVHLPQLESLYLGNNKITDIT-VLSRLTKLDTLSLEDNQ-ISDIVP--LAGLTKLQNLYLSKNHI----- 190 (210)
T ss_dssp TSC-CCCCGGGGGCTTCCEEECCSSCCCCCG-GGGGCTTCSEEECCSSC-CCCCGG--GTTCTTCCEEECCSSCC-----
T ss_pred ccc-ccccccccccccccccccccccccccc-ccccccccccccccccc-cccccc--ccCCCCCCEEECCCCCC-----
Confidence 777 566667777777778877777776654 46677777777777754 445554 67777777777777753
Q ss_pred chhhhhhccchhhhcCCCCCcEEEEeC
Q 005708 194 SEEDARSNAKFIELGALSRLTSLHIDI 220 (681)
Q Consensus 194 ~~~~~~~~~~~~~l~~l~~L~~L~l~~ 220 (681)
..+..+..+++|++|++++
T Consensus 191 --------~~l~~l~~l~~L~~L~Ls~ 209 (210)
T d1h6ta2 191 --------SDLRALAGLKNLDVLELFS 209 (210)
T ss_dssp --------CBCGGGTTCTTCSEEEEEE
T ss_pred --------CCChhhcCCCCCCEEEccC
Confidence 1223567777777777653
No 10
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.69 E-value=1.6e-16 Score=146.65 Aligned_cols=147 Identities=20% Similarity=0.258 Sum_probs=94.2
Q ss_pred CCCCCccEEEccCCCCccCCCCCCCCCCcEEEccCCCCCCCChHHHhCCCCccEEEecCCCCCCCCccccCCCCCcEEEc
Q 005708 33 NTFEDLTGISLMFNDIHEVPDELECPKLQALFLQENSPLAIPDRFFQGMKDLKVLDLGGIRGFSLPSSLSFLINLRTLSL 112 (681)
Q Consensus 33 ~~l~~lr~L~l~~~~~~~l~~~~~~~~Lr~L~l~~~~~~~l~~~~~~~l~~Lr~L~L~~~~~~~lp~~i~~l~~L~~L~L 112 (681)
..+++++.|+++++.+..+.....+++|++|++++|.+..+++ |+++++|++|++++|.+..++. ++++++|++|++
T Consensus 37 ~~l~~l~~L~l~~~~i~~l~~l~~l~nL~~L~Ls~N~l~~~~~--l~~l~~L~~L~l~~n~~~~~~~-l~~l~~L~~L~l 113 (199)
T d2omxa2 37 TDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP-LANLTNLTGLTL 113 (199)
T ss_dssp HHHTTCCEEECTTSCCCCCTTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG-GTTCTTCSEEEC
T ss_pred HHhcCCCEEECCCCCCCCccccccCCCcCcCccccccccCccc--ccCCcccccccccccccccccc-cccccccccccc
Confidence 3455666777777766666543466677777777776666654 5667777777777766666553 566677777777
Q ss_pred cCCCCCCCCcccCCCCCccEEEcccCCCcccchhhcCCccCcEEeccCCCCCCccChhhhcCCCCCcEEEcccCc
Q 005708 113 HDCRRFGDLPLIGELSLLEILDLSESDVSEIPVSFGRLGHLRLLDLTDCVHLELIPRDVLSSLRKLEELYMSHSF 187 (681)
Q Consensus 113 ~~~~~~~~l~~l~~L~~L~~L~l~~~~i~~lp~~i~~l~~L~~L~L~~~~~~~~~~~~~l~~l~~L~~L~l~~~~ 187 (681)
++|. ...++.+..+++|++|++++|.+..+| .+..+++|++|++.+|. +..+++ ++++++|++|++++|.
T Consensus 114 ~~~~-~~~~~~~~~l~~L~~L~l~~n~l~~~~-~l~~~~~L~~L~l~~n~-l~~l~~--l~~l~~L~~L~ls~N~ 183 (199)
T d2omxa2 114 FNNQ-ITDIDPLKNLTNLNRLELSSNTISDIS-ALSGLTSLQQLNFSSNQ-VTDLKP--LANLTTLERLDISSNK 183 (199)
T ss_dssp CSSC-CCCCGGGTTCTTCSEEECCSSCCCCCG-GGTTCTTCSEEECCSSC-CCCCGG--GTTCTTCCEEECCSSC
T ss_pred cccc-cccccccchhhhhHHhhhhhhhhcccc-ccccccccccccccccc-ccCCcc--ccCCCCCCEEECCCCC
Confidence 6666 455556666677777777776666554 46666677777776643 344443 5666667777666664
No 11
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.69 E-value=6e-17 Score=161.58 Aligned_cols=173 Identities=20% Similarity=0.282 Sum_probs=87.6
Q ss_pred CccEEEccCCCCc---cCCCCC-CCCCCcEEEccC-CCCC-CCChHHHhCCCCccEEEecCCCCC-CCCccccCCCCCcE
Q 005708 37 DLTGISLMFNDIH---EVPDEL-ECPKLQALFLQE-NSPL-AIPDRFFQGMKDLKVLDLGGIRGF-SLPSSLSFLINLRT 109 (681)
Q Consensus 37 ~lr~L~l~~~~~~---~l~~~~-~~~~Lr~L~l~~-~~~~-~l~~~~~~~l~~Lr~L~L~~~~~~-~lp~~i~~l~~L~~ 109 (681)
+++.|+++++.+. .+|+.+ .+++|++|++++ |.+. .+|.. |+++++|++|++++|++. ..+..+..+.+|++
T Consensus 51 ~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~N~l~g~iP~~-i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~ 129 (313)
T d1ogqa_ 51 RVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPA-IAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGG-GGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred EEEEEECCCCCCCCCCCCChHHhcCccccccccccccccccccccc-cccccccchhhhccccccccccccccchhhhcc
Confidence 4555666665554 244444 555666666654 4443 45544 355666666666665553 23444555555666
Q ss_pred EEccCCCCCCCCc-ccCCCCCccEEEcccCCCc-ccchhhcCCccC-cEEeccCCCCCCccChhhhcCCCCCcEEEcccC
Q 005708 110 LSLHDCRRFGDLP-LIGELSLLEILDLSESDVS-EIPVSFGRLGHL-RLLDLTDCVHLELIPRDVLSSLRKLEELYMSHS 186 (681)
Q Consensus 110 L~L~~~~~~~~l~-~l~~L~~L~~L~l~~~~i~-~lp~~i~~l~~L-~~L~L~~~~~~~~~~~~~l~~l~~L~~L~l~~~ 186 (681)
+++++|.....+| .++++++|+++++++|.+. .+|..+..+.++ +.++++++...+..|.. +.++..+ .+++..+
T Consensus 130 l~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~-~~~l~~~-~l~l~~~ 207 (313)
T d1ogqa_ 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPT-FANLNLA-FVDLSRN 207 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGG-GGGCCCS-EEECCSS
T ss_pred cccccccccccCchhhccCcccceeecccccccccccccccccccccccccccccccccccccc-ccccccc-ccccccc
Confidence 6665555444444 5555566666666555554 455555555544 45555554333333332 4444333 3554444
Q ss_pred cccccccchhhhhhccchhhhcCCCCCcEEEEeCCCC
Q 005708 187 FCHWQFESEEDARSNAKFIELGALSRLTSLHIDIPKG 223 (681)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~ 223 (681)
.. ....+..+..+++++.+++.++..
T Consensus 208 ~~-----------~~~~~~~~~~~~~l~~l~~~~~~l 233 (313)
T d1ogqa_ 208 ML-----------EGDASVLFGSDKNTQKIHLAKNSL 233 (313)
T ss_dssp EE-----------EECCGGGCCTTSCCSEEECCSSEE
T ss_pred cc-----------cccccccccccccccccccccccc
Confidence 31 113344445555555555555443
No 12
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.68 E-value=3.2e-16 Score=148.09 Aligned_cols=195 Identities=18% Similarity=0.238 Sum_probs=163.0
Q ss_pred cCCCCCCCCCCccEEEccCCCCccCCCCCCCCCCcEEEccCCCCCCCChHHHhCCCCccEEEecCCCCCCCCccccCCCC
Q 005708 27 KDWPSINTFEDLTGISLMFNDIHEVPDELECPKLQALFLQENSPLAIPDRFFQGMKDLKVLDLGGIRGFSLPSSLSFLIN 106 (681)
Q Consensus 27 ~~~~~~~~l~~lr~L~l~~~~~~~l~~~~~~~~Lr~L~l~~~~~~~l~~~~~~~l~~Lr~L~L~~~~~~~lp~~i~~l~~ 106 (681)
.+......+.+|+.|++.++.++.++....+++|++|++++|.+..+++ |..+++|+++++++|.+..++ .+..+++
T Consensus 32 ~d~~~~~~l~~L~~L~l~~~~i~~l~~l~~l~~L~~L~ls~n~i~~~~~--l~~l~~l~~l~~~~n~~~~i~-~l~~l~~ 108 (227)
T d1h6ua2 32 TDTVTQADLDGITTLSAFGTGVTTIEGVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNVS-AIAGLQS 108 (227)
T ss_dssp TSEECHHHHHTCCEEECTTSCCCCCTTGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCCG-GGTTCTT
T ss_pred CCcCCHHHcCCcCEEECCCCCCCcchhHhcCCCCcEeecCCceeecccc--ccccccccccccccccccccc-ccccccc
Confidence 3344556678999999999999988654589999999999999998876 799999999999999998876 5789999
Q ss_pred CcEEEccCCCCCCCCcccCCCCCccEEEcccCCCcccchhhcCCccCcEEeccCCCCCCccChhhhcCCCCCcEEEcccC
Q 005708 107 LRTLSLHDCRRFGDLPLIGELSLLEILDLSESDVSEIPVSFGRLGHLRLLDLTDCVHLELIPRDVLSSLRKLEELYMSHS 186 (681)
Q Consensus 107 L~~L~L~~~~~~~~l~~l~~L~~L~~L~l~~~~i~~lp~~i~~l~~L~~L~L~~~~~~~~~~~~~l~~l~~L~~L~l~~~ 186 (681)
|++++++++. ...++.+...+.++.+.++++.+...+ .+..+++|++|++++|.. ...+. ++++++|+.|++++|
T Consensus 109 L~~l~l~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~L~~L~l~~n~~-~~~~~--l~~l~~L~~L~Ls~n 183 (227)
T d1h6ua2 109 IKTLDLTSTQ-ITDVTPLAGLSNLQVLYLDLNQITNIS-PLAGLTNLQYLSIGNAQV-SDLTP--LANLSKLTTLKADDN 183 (227)
T ss_dssp CCEEECTTSC-CCCCGGGTTCTTCCEEECCSSCCCCCG-GGGGCTTCCEEECCSSCC-CCCGG--GTTCTTCCEEECCSS
T ss_pred cccccccccc-ccccchhccccchhhhhchhhhhchhh-hhcccccccccccccccc-ccchh--hcccccceecccCCC
Confidence 9999999988 677778888999999999998887654 477889999999999654 34443 789999999999998
Q ss_pred cccccccchhhhhhccchhhhcCCCCCcEEEEeCCCCCCCCCCCCCCCccEEEEEe
Q 005708 187 FCHWQFESEEDARSNAKFIELGALSRLTSLHIDIPKGKIMPSDMSFQNLTSFSIKI 242 (681)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~L~~L~l~~ 242 (681)
.+ ..+..++.+++|++|++++|.++.+++...+++|+.|++.+
T Consensus 184 ~l-------------~~l~~l~~l~~L~~L~Ls~N~lt~i~~l~~l~~L~~L~lsn 226 (227)
T d1h6ua2 184 KI-------------SDISPLASLPNLIEVHLKNNQISDVSPLANTSNLFIVTLTN 226 (227)
T ss_dssp CC-------------CCCGGGGGCTTCCEEECTTSCCCBCGGGTTCTTCCEEEEEE
T ss_pred cc-------------CCChhhcCCCCCCEEECcCCcCCCCcccccCCCCCEEEeeC
Confidence 64 22345889999999999999998888777889999998864
No 13
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.68 E-value=1.7e-16 Score=146.44 Aligned_cols=178 Identities=19% Similarity=0.247 Sum_probs=147.1
Q ss_pred EEEccCCCCccCCCCCCCCCCcEEEccCCCCCCCChHHHhCCCCccEEEecCCCCCCCCccccCCCCCcEEEccCCCCCC
Q 005708 40 GISLMFNDIHEVPDELECPKLQALFLQENSPLAIPDRFFQGMKDLKVLDLGGIRGFSLPSSLSFLINLRTLSLHDCRRFG 119 (681)
Q Consensus 40 ~L~l~~~~~~~l~~~~~~~~Lr~L~l~~~~~~~l~~~~~~~l~~Lr~L~L~~~~~~~lp~~i~~l~~L~~L~L~~~~~~~ 119 (681)
+..+..+.+.+......++++++|+++++.+.++.. ++.+++|++|++++|++..++. ++++++|++|++++|. ..
T Consensus 22 ~~~l~~~~~~~~~~~~~l~~l~~L~l~~~~i~~l~~--l~~l~nL~~L~Ls~N~l~~~~~-l~~l~~L~~L~l~~n~-~~ 97 (199)
T d2omxa2 22 KTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDG--VEYLNNLTQINFSNNQLTDITP-LKNLTKLVDILMNNNQ-IA 97 (199)
T ss_dssp HHHTTCSSTTSEECHHHHTTCCEEECTTSCCCCCTT--GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSC-CC
T ss_pred HHHhCCCCCCCccCHHHhcCCCEEECCCCCCCCccc--cccCCCcCcCccccccccCccc-ccCCcccccccccccc-cc
Confidence 334555555544433467899999999999998865 6899999999999999988875 8999999999999998 88
Q ss_pred CCcccCCCCCccEEEcccCCCcccchhhcCCccCcEEeccCCCCCCccChhhhcCCCCCcEEEcccCcccccccchhhhh
Q 005708 120 DLPLIGELSLLEILDLSESDVSEIPVSFGRLGHLRLLDLTDCVHLELIPRDVLSSLRKLEELYMSHSFCHWQFESEEDAR 199 (681)
Q Consensus 120 ~l~~l~~L~~L~~L~l~~~~i~~lp~~i~~l~~L~~L~L~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~ 199 (681)
.++.++++++|++|+++++.+..++ .+..+++|++|++++|. +..++. +..+++|+.|++.+|.+
T Consensus 98 ~~~~l~~l~~L~~L~l~~~~~~~~~-~~~~l~~L~~L~l~~n~-l~~~~~--l~~~~~L~~L~l~~n~l----------- 162 (199)
T d2omxa2 98 DITPLANLTNLTGLTLFNNQITDID-PLKNLTNLNRLELSSNT-ISDISA--LSGLTSLQQLNFSSNQV----------- 162 (199)
T ss_dssp CCGGGTTCTTCSEEECCSSCCCCCG-GGTTCTTCSEEECCSSC-CCCCGG--GTTCTTCSEEECCSSCC-----------
T ss_pred ccccccccccccccccccccccccc-ccchhhhhHHhhhhhhh-hccccc--ccccccccccccccccc-----------
Confidence 8888999999999999999888764 58889999999999965 556664 88999999999999864
Q ss_pred hccchhhhcCCCCCcEEEEeCCCCCCCCCCCCCCCccEE
Q 005708 200 SNAKFIELGALSRLTSLHIDIPKGKIMPSDMSFQNLTSF 238 (681)
Q Consensus 200 ~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~L~~L 238 (681)
..+..++.+++|++|++++|.++.++....+++|+.|
T Consensus 163 --~~l~~l~~l~~L~~L~ls~N~i~~i~~l~~L~~L~~L 199 (199)
T d2omxa2 163 --TDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESL 199 (199)
T ss_dssp --CCCGGGTTCTTCCEEECCSSCCCCCGGGGGCTTCSEE
T ss_pred --cCCccccCCCCCCEEECCCCCCCCCccccCCCCCCcC
Confidence 2234688999999999999998877655677777764
No 14
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.67 E-value=3.3e-16 Score=145.77 Aligned_cols=166 Identities=22% Similarity=0.268 Sum_probs=144.2
Q ss_pred CCCCCcEEEccCCCCCCCChHHHhCCCCccEEEecCCCCCCCCccccCCCCCcEEEccCCCCCCCCcccCCCCCccEEEc
Q 005708 56 ECPKLQALFLQENSPLAIPDRFFQGMKDLKVLDLGGIRGFSLPSSLSFLINLRTLSLHDCRRFGDLPLIGELSLLEILDL 135 (681)
Q Consensus 56 ~~~~Lr~L~l~~~~~~~l~~~~~~~l~~Lr~L~L~~~~~~~lp~~i~~l~~L~~L~L~~~~~~~~l~~l~~L~~L~~L~l 135 (681)
.+.+|+.|++++|.+..++. +..+++|++|++++|++..++. ++.+++|++|++++|+ ++.+|.++++++|+.|++
T Consensus 44 ~L~~L~~L~l~~~~i~~l~~--l~~l~~L~~L~L~~n~i~~l~~-~~~l~~L~~L~l~~n~-i~~l~~l~~l~~L~~L~l 119 (210)
T d1h6ta2 44 ELNSIDQIIANNSDIKSVQG--IQYLPNVTKLFLNGNKLTDIKP-LANLKNLGWLFLDENK-VKDLSSLKDLKKLKSLSL 119 (210)
T ss_dssp HHHTCCEEECTTSCCCCCTT--GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSC-CCCGGGGTTCTTCCEEEC
T ss_pred HhcCccEEECcCCCCCCchh--HhhCCCCCEEeCCCccccCccc-cccCcccccccccccc-cccccccccccccccccc
Confidence 56789999999999998875 6899999999999999988874 7899999999999998 889999999999999999
Q ss_pred ccCCCcccchhhcCCccCcEEeccCCCCCCccChhhhcCCCCCcEEEcccCcccccccchhhhhhccchhhhcCCCCCcE
Q 005708 136 SESDVSEIPVSFGRLGHLRLLDLTDCVHLELIPRDVLSSLRKLEELYMSHSFCHWQFESEEDARSNAKFIELGALSRLTS 215 (681)
Q Consensus 136 ~~~~i~~lp~~i~~l~~L~~L~L~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~l~~l~~L~~ 215 (681)
+++.+..++ .+..+++|++++++++. +...+. +.++++|+++++++|.. ..+..++.+++|++
T Consensus 120 ~~~~~~~~~-~l~~l~~l~~l~~~~n~-l~~~~~--~~~l~~L~~l~l~~n~l-------------~~i~~l~~l~~L~~ 182 (210)
T d1h6ta2 120 EHNGISDIN-GLVHLPQLESLYLGNNK-ITDITV--LSRLTKLDTLSLEDNQI-------------SDIVPLAGLTKLQN 182 (210)
T ss_dssp TTSCCCCCG-GGGGCTTCCEEECCSSC-CCCCGG--GGGCTTCSEEECCSSCC-------------CCCGGGTTCTTCCE
T ss_pred ccccccccc-ccccccccccccccccc-cccccc--ccccccccccccccccc-------------cccccccCCCCCCE
Confidence 999988875 58899999999999965 445544 78899999999999864 22345889999999
Q ss_pred EEEeCCCCCCCCCCCCCCCccEEEEEe
Q 005708 216 LHIDIPKGKIMPSDMSFQNLTSFSIKI 242 (681)
Q Consensus 216 L~l~~~~~~~~~~~~~l~~L~~L~l~~ 242 (681)
|++++|.++.++....+++|+.|+++.
T Consensus 183 L~Ls~N~i~~l~~l~~l~~L~~L~Ls~ 209 (210)
T d1h6ta2 183 LYLSKNHISDLRALAGLKNLDVLELFS 209 (210)
T ss_dssp EECCSSCCCBCGGGTTCTTCSEEEEEE
T ss_pred EECCCCCCCCChhhcCCCCCCEEEccC
Confidence 999999998887668889999999864
No 15
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.66 E-value=2e-14 Score=145.63 Aligned_cols=141 Identities=21% Similarity=0.239 Sum_probs=105.1
Q ss_pred CCCcEEEccCCCCCCCChHHHhCCCCccEEEecCCCCCCCCccccCCCCCcEEEccCCCCCCCCcccCCCCCccEEEccc
Q 005708 58 PKLQALFLQENSPLAIPDRFFQGMKDLKVLDLGGIRGFSLPSSLSFLINLRTLSLHDCRRFGDLPLIGELSLLEILDLSE 137 (681)
Q Consensus 58 ~~Lr~L~l~~~~~~~l~~~~~~~l~~Lr~L~L~~~~~~~lp~~i~~l~~L~~L~L~~~~~~~~l~~l~~L~~L~~L~l~~ 137 (681)
.++++|+++++.++.+|+ ..++|++|++++|++.++|..+ .+|+.|++++|+ ++.++.+. ++|++|++++
T Consensus 38 ~~l~~LdLs~~~L~~lp~----~~~~L~~L~Ls~N~l~~lp~~~---~~L~~L~l~~n~-l~~l~~lp--~~L~~L~L~~ 107 (353)
T d1jl5a_ 38 RQAHELELNNLGLSSLPE----LPPHLESLVASCNSLTELPELP---QSLKSLLVDNNN-LKALSDLP--PLLEYLGVSN 107 (353)
T ss_dssp HTCSEEECTTSCCSCCCS----CCTTCSEEECCSSCCSSCCCCC---TTCCEEECCSSC-CSCCCSCC--TTCCEEECCS
T ss_pred cCCCEEEeCCCCCCCCCC----CCCCCCEEECCCCCCcccccch---hhhhhhhhhhcc-cchhhhhc--cccccccccc
Confidence 468899999999999885 3578999999999999998764 478899999887 67666432 4699999999
Q ss_pred CCCcccchhhcCCccCcEEeccCCCCCCccChhhhcCCCCCcEEEcccCcccccccchhhhhhccchhhhcCCCCCcEEE
Q 005708 138 SDVSEIPVSFGRLGHLRLLDLTDCVHLELIPRDVLSSLRKLEELYMSHSFCHWQFESEEDARSNAKFIELGALSRLTSLH 217 (681)
Q Consensus 138 ~~i~~lp~~i~~l~~L~~L~L~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~l~~l~~L~~L~ 217 (681)
|.+..+|. ++.+++|++|+++++.. ...+. ....+..+.+..+.. .....++.++.++.+.
T Consensus 108 n~l~~lp~-~~~l~~L~~L~l~~~~~-~~~~~----~~~~l~~l~~~~~~~-------------~~~~~l~~l~~l~~L~ 168 (353)
T d1jl5a_ 108 NQLEKLPE-LQNSSFLKIIDVDNNSL-KKLPD----LPPSLEFIAAGNNQL-------------EELPELQNLPFLTAIY 168 (353)
T ss_dssp SCCSSCCC-CTTCTTCCEEECCSSCC-SCCCC----CCTTCCEEECCSSCC-------------SSCCCCTTCTTCCEEE
T ss_pred cccccccc-hhhhccceeeccccccc-ccccc----ccccccchhhccccc-------------cccccccccccceecc
Confidence 99999985 68899999999988543 34433 245666777655432 2334566778888888
Q ss_pred EeCCCCCCCC
Q 005708 218 IDIPKGKIMP 227 (681)
Q Consensus 218 l~~~~~~~~~ 227 (681)
+..+.....+
T Consensus 169 l~~n~~~~~~ 178 (353)
T d1jl5a_ 169 ADNNSLKKLP 178 (353)
T ss_dssp CCSSCCSSCC
T ss_pred cccccccccc
Confidence 8877665444
No 16
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.65 E-value=1.3e-15 Score=149.26 Aligned_cols=197 Identities=20% Similarity=0.258 Sum_probs=162.9
Q ss_pred EEEccCCCCccCCCCCCCCCCcEEEccCCCCCCCChHHHhCCCCccEEEecCCCCCCCC-ccccCCCCCcEEEccCCCCC
Q 005708 40 GISLMFNDIHEVPDELECPKLQALFLQENSPLAIPDRFFQGMKDLKVLDLGGIRGFSLP-SSLSFLINLRTLSLHDCRRF 118 (681)
Q Consensus 40 ~L~l~~~~~~~l~~~~~~~~Lr~L~l~~~~~~~l~~~~~~~l~~Lr~L~L~~~~~~~lp-~~i~~l~~L~~L~L~~~~~~ 118 (681)
.+..++..++.+|..+. +.+++|++++|.++.++...|.++++|++|+++++.+..++ ..+.++..++.+....+..+
T Consensus 15 ~v~c~~~~L~~iP~~ip-~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~ 93 (284)
T d1ozna_ 15 TTSCPQQGLQAVPVGIP-AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQL 93 (284)
T ss_dssp EEECCSSCCSSCCTTCC-TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTC
T ss_pred EEEcCCCCCCccCCCCC-CCCCEEECcCCcCCCCCHHHhhcccccccccccccccccccccccccccccccccccccccc
Confidence 46677788888887653 67899999999999999888999999999999999996654 45678899999988777668
Q ss_pred CCCc--ccCCCCCccEEEcccCCCcccch-hhcCCccCcEEeccCCCCCCccChhhhcCCCCCcEEEcccCcccccccch
Q 005708 119 GDLP--LIGELSLLEILDLSESDVSEIPV-SFGRLGHLRLLDLTDCVHLELIPRDVLSSLRKLEELYMSHSFCHWQFESE 195 (681)
Q Consensus 119 ~~l~--~l~~L~~L~~L~l~~~~i~~lp~-~i~~l~~L~~L~L~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~ 195 (681)
+.++ .++++++|++|+++++.+..++. .+....+|+.++++++ .+..+|...+..+++|++|++++|.+.
T Consensus 94 ~~l~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N-~l~~i~~~~f~~~~~L~~L~l~~N~l~------ 166 (284)
T d1ozna_ 94 RSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDN-ALQALPDDTFRDLGNLTHLFLHGNRIS------ 166 (284)
T ss_dssp CCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSS-CCCCCCTTTTTTCTTCCEEECCSSCCC------
T ss_pred ccccchhhcccccCCEEecCCcccccccccccchhcccchhhhccc-cccccChhHhccccchhhcccccCccc------
Confidence 8875 89999999999999999987654 5778899999999995 567888776889999999999998642
Q ss_pred hhhhhccchhhhcCCCCCcEEEEeCCCCCCCCCC--CCCCCccEEEEEecCCcCCC
Q 005708 196 EDARSNAKFIELGALSRLTSLHIDIPKGKIMPSD--MSFQNLTSFSIKIGDLEEDP 249 (681)
Q Consensus 196 ~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~--~~l~~L~~L~l~~~~~~~~~ 249 (681)
...+..+..+++|+.+++.+|.+..+++. ..+++|+.|++..+.....+
T Consensus 167 -----~l~~~~f~~l~~L~~l~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~i~~~~ 217 (284)
T d1ozna_ 167 -----SVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALP 217 (284)
T ss_dssp -----EECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred -----ccchhhhccccccchhhhhhccccccChhHhhhhhhccccccccccccccc
Confidence 12346788999999999999998766544 67788999998887765544
No 17
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.65 E-value=1.1e-16 Score=159.70 Aligned_cols=201 Identities=19% Similarity=0.276 Sum_probs=168.1
Q ss_pred CCCCCCCccEEEccC-CCCc-cCCCCC-CCCCCcEEEccCCCCCCCChHHHhCCCCccEEEecCCCC-CCCCccccCCCC
Q 005708 31 SINTFEDLTGISLMF-NDIH-EVPDEL-ECPKLQALFLQENSPLAIPDRFFQGMKDLKVLDLGGIRG-FSLPSSLSFLIN 106 (681)
Q Consensus 31 ~~~~l~~lr~L~l~~-~~~~-~l~~~~-~~~~Lr~L~l~~~~~~~l~~~~~~~l~~Lr~L~L~~~~~-~~lp~~i~~l~~ 106 (681)
.+.++++|++|++++ |.+. .+|..+ .+++|++|++++|.+..++...+..+.+|+++++++|.+ ..+|..++++++
T Consensus 71 ~l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~N~~~~~~p~~l~~l~~ 150 (313)
T d1ogqa_ 71 SLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPN 150 (313)
T ss_dssp GGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTT
T ss_pred HHhcCccccccccccccccccccccccccccccchhhhccccccccccccccchhhhcccccccccccccCchhhccCcc
Confidence 588999999999996 7776 788777 899999999999999987777789999999999999988 778999999999
Q ss_pred CcEEEccCCCCCCCCc-ccCCCCCc-cEEEcccCCCc-ccchhhcCCccCcEEeccCCCCCCccChhhhcCCCCCcEEEc
Q 005708 107 LRTLSLHDCRRFGDLP-LIGELSLL-EILDLSESDVS-EIPVSFGRLGHLRLLDLTDCVHLELIPRDVLSSLRKLEELYM 183 (681)
Q Consensus 107 L~~L~L~~~~~~~~l~-~l~~L~~L-~~L~l~~~~i~-~lp~~i~~l~~L~~L~L~~~~~~~~~~~~~l~~l~~L~~L~l 183 (681)
|+++++++|.....+| .++.+..+ +.+++++++++ ..|..++.+..+ ++++.++...+.+|.. +..+++|+.+++
T Consensus 151 L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~~~-~l~l~~~~~~~~~~~~-~~~~~~l~~l~~ 228 (313)
T d1ogqa_ 151 LVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLA-FVDLSRNMLEGDASVL-FGSDKNTQKIHL 228 (313)
T ss_dssp CCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCS-EEECCSSEEEECCGGG-CCTTSCCSEEEC
T ss_pred cceeeccccccccccccccccccccccccccccccccccccccccccccc-cccccccccccccccc-cccccccccccc
Confidence 9999999999666777 78888876 89999999987 446677777554 6888887766666665 789999999999
Q ss_pred ccCcccccccchhhhhhccchhhhcCCCCCcEEEEeCCCCC-CCCCC-CCCCCccEEEEEecCC
Q 005708 184 SHSFCHWQFESEEDARSNAKFIELGALSRLTSLHIDIPKGK-IMPSD-MSFQNLTSFSIKIGDL 245 (681)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~-~~~~~-~~l~~L~~L~l~~~~~ 245 (681)
.++... ..+..+..+++|+.|++++|++. .+|.. ..+++|+.|+++++..
T Consensus 229 ~~~~l~------------~~~~~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l 280 (313)
T d1ogqa_ 229 AKNSLA------------FDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNL 280 (313)
T ss_dssp CSSEEC------------CBGGGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEE
T ss_pred cccccc------------ccccccccccccccccCccCeecccCChHHhCCCCCCEEECcCCcc
Confidence 888542 34557888999999999999986 67766 7788899998877654
No 18
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.60 E-value=1.6e-14 Score=136.14 Aligned_cols=180 Identities=22% Similarity=0.293 Sum_probs=152.4
Q ss_pred EEeCCcccCCCCCCCCCCccEEEccCCCCccCCCCCCCCCCcEEEccCCCCCCCChHHHhCCCCccEEEecCCCCCCCCc
Q 005708 20 IKAGVELKDWPSINTFEDLTGISLMFNDIHEVPDELECPKLQALFLQENSPLAIPDRFFQGMKDLKVLDLGGIRGFSLPS 99 (681)
Q Consensus 20 ~~~~~~~~~~~~~~~l~~lr~L~l~~~~~~~l~~~~~~~~Lr~L~l~~~~~~~l~~~~~~~l~~Lr~L~L~~~~~~~lp~ 99 (681)
...+.+++.++.+..+++|++|++++|.+..+.....+++++++++++|.++.++. |.++++|++++++++....++.
T Consensus 47 ~l~~~~i~~l~~l~~l~~L~~L~ls~n~i~~~~~l~~l~~l~~l~~~~n~~~~i~~--l~~l~~L~~l~l~~~~~~~~~~ 124 (227)
T d1h6ua2 47 SAFGTGVTTIEGVQYLNNLIGLELKDNQITDLAPLKNLTKITELELSGNPLKNVSA--IAGLQSIKTLDLTSTQITDVTP 124 (227)
T ss_dssp ECTTSCCCCCTTGGGCTTCCEEECCSSCCCCCGGGTTCCSCCEEECCSCCCSCCGG--GTTCTTCCEEECTTSCCCCCGG
T ss_pred ECCCCCCCcchhHhcCCCCcEeecCCceeecccccccccccccccccccccccccc--ccccccccccccccccccccch
Confidence 33456678888899999999999999999888776699999999999999998875 7899999999999998766543
Q ss_pred cccCCCCCcEEEccCCCCCCCCcccCCCCCccEEEcccCCCcccchhhcCCccCcEEeccCCCCCCccChhhhcCCCCCc
Q 005708 100 SLSFLINLRTLSLHDCRRFGDLPLIGELSLLEILDLSESDVSEIPVSFGRLGHLRLLDLTDCVHLELIPRDVLSSLRKLE 179 (681)
Q Consensus 100 ~i~~l~~L~~L~L~~~~~~~~l~~l~~L~~L~~L~l~~~~i~~lp~~i~~l~~L~~L~L~~~~~~~~~~~~~l~~l~~L~ 179 (681)
+.....++.+.+..+. +...+.+.+.++|++|+++++.+...+ .++++++|++|++++| .+..++. ++++++|+
T Consensus 125 -~~~~~~~~~l~~~~~~-~~~~~~~~~~~~L~~L~l~~n~~~~~~-~l~~l~~L~~L~Ls~n-~l~~l~~--l~~l~~L~ 198 (227)
T d1h6ua2 125 -LAGLSNLQVLYLDLNQ-ITNISPLAGLTNLQYLSIGNAQVSDLT-PLANLSKLTTLKADDN-KISDISP--LASLPNLI 198 (227)
T ss_dssp -GTTCTTCCEEECCSSC-CCCCGGGGGCTTCCEEECCSSCCCCCG-GGTTCTTCCEEECCSS-CCCCCGG--GGGCTTCC
T ss_pred -hccccchhhhhchhhh-hchhhhhccccccccccccccccccch-hhcccccceecccCCC-ccCCChh--hcCCCCCC
Confidence 5678899999998887 666667888999999999999988765 4889999999999996 5667775 89999999
Q ss_pred EEEcccCcccccccchhhhhhccchhhhcCCCCCcEEEEeC
Q 005708 180 ELYMSHSFCHWQFESEEDARSNAKFIELGALSRLTSLHIDI 220 (681)
Q Consensus 180 ~L~l~~~~~~~~~~~~~~~~~~~~~~~l~~l~~L~~L~l~~ 220 (681)
+|++++|.+ ..+..++.+++|+.|++++
T Consensus 199 ~L~Ls~N~l-------------t~i~~l~~l~~L~~L~lsn 226 (227)
T d1h6ua2 199 EVHLKNNQI-------------SDVSPLANTSNLFIVTLTN 226 (227)
T ss_dssp EEECTTSCC-------------CBCGGGTTCTTCCEEEEEE
T ss_pred EEECcCCcC-------------CCCcccccCCCCCEEEeeC
Confidence 999999864 2233589999999999863
No 19
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.54 E-value=2.4e-14 Score=119.93 Aligned_cols=118 Identities=20% Similarity=0.207 Sum_probs=83.5
Q ss_pred cEEEccCCCCCCCChHHHhCCCCccEEEecCCCCCCCCccccCCCCCcEEEccCCCCCCCCcccCCCCCccEEEcccCCC
Q 005708 61 QALFLQENSPLAIPDRFFQGMKDLKVLDLGGIRGFSLPSSLSFLINLRTLSLHDCRRFGDLPLIGELSLLEILDLSESDV 140 (681)
Q Consensus 61 r~L~l~~~~~~~l~~~~~~~l~~Lr~L~L~~~~~~~lp~~i~~l~~L~~L~L~~~~~~~~l~~l~~L~~L~~L~l~~~~i 140 (681)
|+|++++|.++.++. ++.+++|++|++++|++..+|..++.+++|++|++++|. ++.+|.++++++|++|++++|.+
T Consensus 1 R~L~Ls~n~l~~l~~--l~~l~~L~~L~ls~N~l~~lp~~~~~l~~L~~L~l~~N~-i~~l~~~~~l~~L~~L~l~~N~i 77 (124)
T d1dcea3 1 RVLHLAHKDLTVLCH--LEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNA-LENVDGVANLPRLQELLLCNNRL 77 (124)
T ss_dssp SEEECTTSCCSSCCC--GGGGTTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSC-CCCCGGGTTCSSCCEEECCSSCC
T ss_pred CEEEcCCCCCCCCcc--cccCCCCCEEECCCCccCcchhhhhhhhccccccccccc-ccccCccccccccCeEECCCCcc
Confidence 567777777777764 577788888888888887787777788888888888877 77777777888888888888877
Q ss_pred cccc--hhhcCCccCcEEeccCCCCC--CccChhhhcCCCCCcEE
Q 005708 141 SEIP--VSFGRLGHLRLLDLTDCVHL--ELIPRDVLSSLRKLEEL 181 (681)
Q Consensus 141 ~~lp--~~i~~l~~L~~L~L~~~~~~--~~~~~~~l~~l~~L~~L 181 (681)
+.+| ..++.+++|++|++++|+.. ...+...+..+++|+.|
T Consensus 78 ~~~~~~~~l~~~~~L~~L~l~~N~i~~~~~~~~~l~~~lp~L~~L 122 (124)
T d1dcea3 78 QQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSI 122 (124)
T ss_dssp CSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEE
T ss_pred CCCCCchhhcCCCCCCEEECCCCcCCcCccHHHHHHHHCcCcceE
Confidence 7665 35677777777777775432 12233334455555554
No 20
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.48 E-value=2.1e-14 Score=126.68 Aligned_cols=123 Identities=17% Similarity=0.136 Sum_probs=60.4
Q ss_pred CCCCCcEEEccCCCCCCCChHHHhCCCCccEEEecCCCCCCCCccccCCCCCcEEEccCCCCCCCCc--ccCCCCCccEE
Q 005708 56 ECPKLQALFLQENSPLAIPDRFFQGMKDLKVLDLGGIRGFSLPSSLSFLINLRTLSLHDCRRFGDLP--LIGELSLLEIL 133 (681)
Q Consensus 56 ~~~~Lr~L~l~~~~~~~l~~~~~~~l~~Lr~L~L~~~~~~~lp~~i~~l~~L~~L~L~~~~~~~~l~--~l~~L~~L~~L 133 (681)
+..++|+|++++|.+..++. .+..+++|++|++++|++..++ .+..+++|++|++++|. +..++ .+..+++|++|
T Consensus 16 n~~~lr~L~L~~n~I~~i~~-~~~~l~~L~~L~Ls~N~i~~l~-~~~~l~~L~~L~ls~N~-i~~l~~~~~~~l~~L~~L 92 (162)
T d1a9na_ 16 NAVRDRELDLRGYKIPVIEN-LGATLDQFDAIDFSDNEIRKLD-GFPLLRRLKTLLVNNNR-ICRIGEGLDQALPDLTEL 92 (162)
T ss_dssp CTTSCEEEECTTSCCCSCCC-GGGGTTCCSEEECCSSCCCEEC-CCCCCSSCCEEECCSSC-CCEECSCHHHHCTTCCEE
T ss_pred CcCcCcEEECCCCCCCccCc-cccccccCCEEECCCCCCCccC-CcccCcchhhhhccccc-ccCCCccccccccccccc
Confidence 34445555555555554442 2344555555555555554443 24455555555555555 44443 23445555555
Q ss_pred EcccCCCcccch--hhcCCccCcEEeccCCCCCCccC---hhhhcCCCCCcEEE
Q 005708 134 DLSESDVSEIPV--SFGRLGHLRLLDLTDCVHLELIP---RDVLSSLRKLEELY 182 (681)
Q Consensus 134 ~l~~~~i~~lp~--~i~~l~~L~~L~L~~~~~~~~~~---~~~l~~l~~L~~L~ 182 (681)
++++|.++.++. .+..+++|++|++++|+. ...| ...+..+++|+.|+
T Consensus 93 ~L~~N~i~~~~~l~~l~~l~~L~~L~l~~N~i-~~~~~~r~~~i~~lp~L~~LD 145 (162)
T d1a9na_ 93 ILTNNSLVELGDLDPLASLKSLTYLCILRNPV-TNKKHYRLYVIYKVPQVRVLD 145 (162)
T ss_dssp ECCSCCCCCGGGGGGGGGCTTCCEEECCSSGG-GGSTTHHHHHHHHCTTCSEET
T ss_pred eeccccccccccccccccccccchhhcCCCcc-ccccchHHHHHHHCCCcCeeC
Confidence 555555554432 345555555555555432 2222 12245566666655
No 21
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.45 E-value=8e-14 Score=135.90 Aligned_cols=123 Identities=19% Similarity=0.196 Sum_probs=57.5
Q ss_pred cEEEccCCCCC-CCChHHHhCCCCccEEEecCCCCCCCCccccCCCCCcEEEccCCCCCCC--Cc-ccCCCCCccEEEcc
Q 005708 61 QALFLQENSPL-AIPDRFFQGMKDLKVLDLGGIRGFSLPSSLSFLINLRTLSLHDCRRFGD--LP-LIGELSLLEILDLS 136 (681)
Q Consensus 61 r~L~l~~~~~~-~l~~~~~~~l~~Lr~L~L~~~~~~~lp~~i~~l~~L~~L~L~~~~~~~~--l~-~l~~L~~L~~L~l~ 136 (681)
++++++++.+. .....++. ..+..+.++...+...........+|++|++++|. +.. ++ .+.++++|++|+++
T Consensus 3 ~~lDLs~~~l~~~~l~~l~~--~~~~~lrl~~~~~~~~~~~~~~~~~L~~LdLs~~~-i~~~~l~~l~~~c~~L~~L~L~ 79 (284)
T d2astb2 3 QTLDLTGKNLHPDVTGRLLS--QGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSV-IEVSTLHGILSQCSKLQNLSLE 79 (284)
T ss_dssp SEEECTTCBCCHHHHHHHHH--TTCSEEECTTCEECSCCCSCCCCBCCCEEECTTCE-ECHHHHHHHHTTBCCCSEEECT
T ss_pred CEEECCCCCCCchHHHHHHh--ccceEeeccccccccchhhhccCCCCCEEECCCCc-cCHHHHHHHHHhCCCccccccc
Confidence 35666666542 11122221 12345555544433322333344566666666655 222 12 34555666666666
Q ss_pred cCCCc-ccchhhcCCccCcEEeccCCCCCCccCh-hhhcCCCCCcEEEcccC
Q 005708 137 ESDVS-EIPVSFGRLGHLRLLDLTDCVHLELIPR-DVLSSLRKLEELYMSHS 186 (681)
Q Consensus 137 ~~~i~-~lp~~i~~l~~L~~L~L~~~~~~~~~~~-~~l~~l~~L~~L~l~~~ 186 (681)
++.+. ..+..++++++|++|++++|..++.... .++.++++|++|++++|
T Consensus 80 ~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L~~L~ls~c 131 (284)
T d2astb2 80 GLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWC 131 (284)
T ss_dssp TCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCC
T ss_pred ccCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHhccccccccc
Confidence 65554 3344455555666666655554432221 11234555555555544
No 22
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.45 E-value=1.9e-13 Score=114.36 Aligned_cols=115 Identities=17% Similarity=0.130 Sum_probs=99.1
Q ss_pred cEEEccCCCCccCCCCCCCCCCcEEEccCCCCCCCChHHHhCCCCccEEEecCCCCCCCCccccCCCCCcEEEccCCCCC
Q 005708 39 TGISLMFNDIHEVPDELECPKLQALFLQENSPLAIPDRFFQGMKDLKVLDLGGIRGFSLPSSLSFLINLRTLSLHDCRRF 118 (681)
Q Consensus 39 r~L~l~~~~~~~l~~~~~~~~Lr~L~l~~~~~~~l~~~~~~~l~~Lr~L~L~~~~~~~lp~~i~~l~~L~~L~L~~~~~~ 118 (681)
|.|++++|+++.++....+++|++|++++|.+..+|+. |+.+++|++|++++|.+..+| .++.+++|++|++++|+ +
T Consensus 1 R~L~Ls~n~l~~l~~l~~l~~L~~L~ls~N~l~~lp~~-~~~l~~L~~L~l~~N~i~~l~-~~~~l~~L~~L~l~~N~-i 77 (124)
T d1dcea3 1 RVLHLAHKDLTVLCHLEQLLLVTHLDLSHNRLRALPPA-LAALRCLEVLQASDNALENVD-GVANLPRLQELLLCNNR-L 77 (124)
T ss_dssp SEEECTTSCCSSCCCGGGGTTCCEEECCSSCCCCCCGG-GGGCTTCCEEECCSSCCCCCG-GGTTCSSCCEEECCSSC-C
T ss_pred CEEEcCCCCCCCCcccccCCCCCEEECCCCccCcchhh-hhhhhcccccccccccccccC-ccccccccCeEECCCCc-c
Confidence 68999999999888755899999999999999999876 689999999999999999887 48999999999999998 7
Q ss_pred CCCc---ccCCCCCccEEEcccCCCcccc---h-hhcCCccCcEE
Q 005708 119 GDLP---LIGELSLLEILDLSESDVSEIP---V-SFGRLGHLRLL 156 (681)
Q Consensus 119 ~~l~---~l~~L~~L~~L~l~~~~i~~lp---~-~i~~l~~L~~L 156 (681)
+.++ .++.+++|++|++++|.++..+ . -+..+++|+.+
T Consensus 78 ~~~~~~~~l~~~~~L~~L~l~~N~i~~~~~~~~~l~~~lp~L~~L 122 (124)
T d1dcea3 78 QQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSI 122 (124)
T ss_dssp CSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEE
T ss_pred CCCCCchhhcCCCCCCEEECCCCcCCcCccHHHHHHHHCcCcceE
Confidence 7665 5788999999999999887543 2 24457777765
No 23
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.42 E-value=5.5e-13 Score=121.66 Aligned_cols=124 Identities=20% Similarity=0.292 Sum_probs=91.0
Q ss_pred cEEEccCCCCccCCCCCCCCCCcEEEccCCCCCC-CChHHHhCCCCccEEEecCCCCCCC-CccccCCCCCcEEEccCCC
Q 005708 39 TGISLMFNDIHEVPDELECPKLQALFLQENSPLA-IPDRFFQGMKDLKVLDLGGIRGFSL-PSSLSFLINLRTLSLHDCR 116 (681)
Q Consensus 39 r~L~l~~~~~~~l~~~~~~~~Lr~L~l~~~~~~~-l~~~~~~~l~~Lr~L~L~~~~~~~l-p~~i~~l~~L~~L~L~~~~ 116 (681)
+.++.++++++.+|..+. +++++|++++|.+.. ++...|.++++|+.|++++|.+..+ +..+..+++|++|++++|+
T Consensus 11 ~~v~Cs~~~L~~iP~~lp-~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N~ 89 (192)
T d1w8aa_ 11 TTVDCTGRGLKEIPRDIP-LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENK 89 (192)
T ss_dssp TEEECTTSCCSSCCSCCC-TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCC
T ss_pred CEEEEeCCCcCccCCCCC-CCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeecccc
Confidence 467777888888776653 678888888888864 5566678888888888888887544 5566777888888888887
Q ss_pred CCCCCc--ccCCCCCccEEEcccCCCcccch-hhcCCccCcEEeccCCCCC
Q 005708 117 RFGDLP--LIGELSLLEILDLSESDVSEIPV-SFGRLGHLRLLDLTDCVHL 164 (681)
Q Consensus 117 ~~~~l~--~l~~L~~L~~L~l~~~~i~~lp~-~i~~l~~L~~L~L~~~~~~ 164 (681)
++.+| .|.++++|++|+|++|.++.+|. .|..+++|++|+|+++...
T Consensus 90 -l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l~L~~N~~~ 139 (192)
T d1w8aa_ 90 -IKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFN 139 (192)
T ss_dssp -CCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBC
T ss_pred -ccccCHHHHhCCCcccccccCCccccccCHHHhcCCcccccccccccccc
Confidence 66665 57778888888888888877754 4677777777777776543
No 24
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.42 E-value=6.5e-13 Score=126.44 Aligned_cols=191 Identities=17% Similarity=0.167 Sum_probs=106.0
Q ss_pred CCcccCCCCCCCCCCccEEEccCCCCccCCCCC--CCCCCcEEEccCCCCCC-CChHHHhCCCCccEEEecC-CCCCC-C
Q 005708 23 GVELKDWPSINTFEDLTGISLMFNDIHEVPDEL--ECPKLQALFLQENSPLA-IPDRFFQGMKDLKVLDLGG-IRGFS-L 97 (681)
Q Consensus 23 ~~~~~~~~~~~~l~~lr~L~l~~~~~~~l~~~~--~~~~Lr~L~l~~~~~~~-l~~~~~~~l~~Lr~L~L~~-~~~~~-l 97 (681)
+.++..+|. .-..+++.|++++|.+..++... ++++|++|++++|.+.. ++...|.+++.+++|.+.. +.+.. .
T Consensus 17 ~~~l~~iP~-~l~~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~n~l~~~~ 95 (242)
T d1xwdc1 17 ESKVTEIPS-DLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYIN 95 (242)
T ss_dssp SCSCSSCCS-CSCSCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECCTTCCEEC
T ss_pred CCCCCCcCC-CCCCCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeeccccccccccccccccccccccccc
Confidence 334555553 11246677777777776666532 66777777777776653 4554566677777776654 34433 3
Q ss_pred CccccCCCCCcEEEccCCCCCCCCcc---cCCCCCccEEEcccCCCcccch-hhcCCc-cCcEEeccCCCCCCccChhhh
Q 005708 98 PSSLSFLINLRTLSLHDCRRFGDLPL---IGELSLLEILDLSESDVSEIPV-SFGRLG-HLRLLDLTDCVHLELIPRDVL 172 (681)
Q Consensus 98 p~~i~~l~~L~~L~L~~~~~~~~l~~---l~~L~~L~~L~l~~~~i~~lp~-~i~~l~-~L~~L~L~~~~~~~~~~~~~l 172 (681)
+..+.++++|++|+++++. +...+. +..+..+..+...++.+..++. .+..++ .++.|++++ +.+..++.. .
T Consensus 96 ~~~~~~l~~L~~l~l~~~~-l~~~~~~~~~~~l~~l~~~~~~n~~l~~i~~~~~~~~~~~l~~L~l~~-n~l~~i~~~-~ 172 (242)
T d1xwdc1 96 PEAFQNLPNLQYLLISNTG-IKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNK-NGIQEIHNC-A 172 (242)
T ss_dssp TTSEECCTTCCEEEEESCC-CCSCCCCTTTCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCS-SCCCEECTT-T
T ss_pred cccccccccccccccchhh-hcccccccccccccccccccccccccccccccccccccccceeeeccc-ccccccccc-c
Confidence 4456667777777777766 544543 3334444444555555655543 334443 566677766 334455554 3
Q ss_pred cCCCCCcEEEc-ccCcccccccchhhhhhccch-hhhcCCCCCcEEEEeCCCCCCCCCC
Q 005708 173 SSLRKLEELYM-SHSFCHWQFESEEDARSNAKF-IELGALSRLTSLHIDIPKGKIMPSD 229 (681)
Q Consensus 173 ~~l~~L~~L~l-~~~~~~~~~~~~~~~~~~~~~-~~l~~l~~L~~L~l~~~~~~~~~~~ 229 (681)
.+..+++.+.. .+|.+ ..++ ..+.++++|+.|++++|++..+|..
T Consensus 173 ~~~~~l~~~~~l~~n~l------------~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~ 219 (242)
T d1xwdc1 173 FNGTQLDELNLSDNNNL------------EELPNDVFHGASGPVILDISRTRIHSLPSY 219 (242)
T ss_dssp TTTCCEEEEECTTCTTC------------CCCCTTTTTTSCCCSEEECTTSCCCCCCSS
T ss_pred ccchhhhcccccccccc------------ccccHHHhcCCCCCCEEECCCCcCCccCHH
Confidence 44455555443 33321 1222 2356677777777777777666553
No 25
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.41 E-value=5.1e-14 Score=137.30 Aligned_cols=190 Identities=14% Similarity=0.104 Sum_probs=113.7
Q ss_pred cCCCcEEEEEecCCceEeeeccccccccccCccceeeecccccccccccCcCCCCcCCCccEEEEeeCCCCCccccchHH
Q 005708 314 FNELMFLVIVRCNEMKCLVNSLERTRRVTLHKLEWLAIFLNQNLVEICHGQLPAGCLSNVKRLDVGDCGSMLKILPSHLV 393 (681)
Q Consensus 314 ~~~L~~L~l~~~~~l~~l~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~~~L~~L~l~~c~~l~~~~~~~~~ 393 (681)
..+|++|++++|. + ...........+++|++|.+.+|. +....... .+.+++|+.|++++|..+++..-...+
T Consensus 45 ~~~L~~LdLs~~~-i---~~~~l~~l~~~c~~L~~L~L~~~~-l~~~~~~~--l~~~~~L~~L~Ls~c~~itd~~l~~l~ 117 (284)
T d2astb2 45 PFRVQHMDLSNSV-I---EVSTLHGILSQCSKLQNLSLEGLR-LSDPIVNT--LAKNSNLVRLNLSGCSGFSEFALQTLL 117 (284)
T ss_dssp CBCCCEEECTTCE-E---CHHHHHHHHTTBCCCSEEECTTCB-CCHHHHHH--HTTCTTCSEEECTTCBSCCHHHHHHHH
T ss_pred CCCCCEEECCCCc-c---CHHHHHHHHHhCCCcccccccccC-CCcHHHHH--HhcCCCCcCccccccccccccccchhh
Confidence 5689999998872 2 111111135667899999999884 33211111 235688999999999888765333445
Q ss_pred hhcCCCcEEEEeeccCcceeecccccccccccccccCccCEEeeccCCC-cccccCCCCCcccccccceeeeccCCcccc
Q 005708 394 QSFQNLQRLRVGRCELLESVFEIERVNIAKEETELFSSLEKLTLIDLPR-MTDIWKGDTQFVSLHNLKKVRVQDCDELRQ 472 (681)
Q Consensus 394 ~~l~~L~~L~l~~c~~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~-L~~~~~~~~~~~~l~~L~~L~i~~c~~l~~ 472 (681)
.++++|++|++++|..+.+..... ......++|+.|.+.+|.. +..-.-.. -..++++|++|++++|+.+++
T Consensus 118 ~~~~~L~~L~ls~c~~~~~~~~~~------~~~~~~~~L~~L~l~~~~~~i~~~~l~~-l~~~~~~L~~L~L~~~~~itd 190 (284)
T d2astb2 118 SSCSRLDELNLSWCFDFTEKHVQV------AVAHVSETITQLNLSGYRKNLQKSDLST-LVRRCPNLVHLDLSDSVMLKN 190 (284)
T ss_dssp HHCTTCCEEECCCCTTCCHHHHHH------HHHHSCTTCCEEECCSCGGGSCHHHHHH-HHHHCTTCSEEECTTCTTCCG
T ss_pred HHHHhccccccccccccccccchh------hhcccccccchhhhcccccccccccccc-cccccccccccccccccCCCc
Confidence 778999999999998765321100 0112347888898888642 32210000 013567888888888877765
Q ss_pred ccccccccceeeceeecccccceeEEEeccCCCCCCCCCCCCccEEEEecCCCcceecchhhHhhhccccEeEEccc
Q 005708 473 VFPTNLGKKAAVEEMVPYRKRRDHIHIHATTSTSSPTPSLGNLVSITIRGCGQLRQLFTTSMVKSLVRLESLEVSSC 549 (681)
Q Consensus 473 ~~~~~l~~~~~L~~L~l~~~~l~~l~~~~~~~~~~~~~~~~~L~~L~i~~c~~l~~l~~~~~~~~l~~L~~L~i~~C 549 (681)
.....+. .+++|++|++++|..+++-.. ..+..+|+|++|++++|
T Consensus 191 ~~~~~l~-------------------------------~~~~L~~L~L~~C~~i~~~~l-~~L~~~~~L~~L~l~~~ 235 (284)
T d2astb2 191 DCFQEFF-------------------------------QLNYLQHLSLSRCYDIIPETL-LELGEIPTLKTLQVFGI 235 (284)
T ss_dssp GGGGGGG-------------------------------GCTTCCEEECTTCTTCCGGGG-GGGGGCTTCCEEECTTS
T ss_pred hhhhhhc-------------------------------ccCcCCEEECCCCCCCChHHH-HHHhcCCCCCEEeeeCC
Confidence 5333333 445666666666665554321 12345666666666666
No 26
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.40 E-value=4.8e-13 Score=117.78 Aligned_cols=130 Identities=18% Similarity=0.155 Sum_probs=105.8
Q ss_pred HhCCCCccEEEecCCCCCCCCccccCCCCCcEEEccCCCCCCCCcccCCCCCccEEEcccCCCcccchh-hcCCccCcEE
Q 005708 78 FQGMKDLKVLDLGGIRGFSLPSSLSFLINLRTLSLHDCRRFGDLPLIGELSLLEILDLSESDVSEIPVS-FGRLGHLRLL 156 (681)
Q Consensus 78 ~~~l~~Lr~L~L~~~~~~~lp~~i~~l~~L~~L~L~~~~~~~~l~~l~~L~~L~~L~l~~~~i~~lp~~-i~~l~~L~~L 156 (681)
|.+..++|.|+|++|++..+|..+..+.+|++|++++|. ++.++.+..+++|++|++++|.++.+|.. +..+++|++|
T Consensus 14 ~~n~~~lr~L~L~~n~I~~i~~~~~~l~~L~~L~Ls~N~-i~~l~~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L~~L 92 (162)
T d1a9na_ 14 YTNAVRDRELDLRGYKIPVIENLGATLDQFDAIDFSDNE-IRKLDGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTEL 92 (162)
T ss_dssp EECTTSCEEEECTTSCCCSCCCGGGGTTCCSEEECCSSC-CCEECCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEE
T ss_pred ccCcCcCcEEECCCCCCCccCccccccccCCEEECCCCC-CCccCCcccCcchhhhhcccccccCCCccccccccccccc
Confidence 568889999999999999998877889999999999998 88888899999999999999999999775 4679999999
Q ss_pred eccCCCCCCccCh-hhhcCCCCCcEEEcccCcccccccchhhhhhccchhhhcCCCCCcEEE
Q 005708 157 DLTDCVHLELIPR-DVLSSLRKLEELYMSHSFCHWQFESEEDARSNAKFIELGALSRLTSLH 217 (681)
Q Consensus 157 ~L~~~~~~~~~~~-~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~l~~l~~L~~L~ 217 (681)
++++|. +..++. ..+..+++|++|++++|.+... . ......+..+++|+.|+
T Consensus 93 ~L~~N~-i~~~~~l~~l~~l~~L~~L~l~~N~i~~~-~-------~~r~~~i~~lp~L~~LD 145 (162)
T d1a9na_ 93 ILTNNS-LVELGDLDPLASLKSLTYLCILRNPVTNK-K-------HYRLYVIYKVPQVRVLD 145 (162)
T ss_dssp ECCSCC-CCCGGGGGGGGGCTTCCEEECCSSGGGGS-T-------THHHHHHHHCTTCSEET
T ss_pred eecccc-ccccccccccccccccchhhcCCCccccc-c-------chHHHHHHHCCCcCeeC
Confidence 999965 445543 3378899999999999865210 1 01233567788888776
No 27
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.35 E-value=6e-12 Score=119.59 Aligned_cols=198 Identities=15% Similarity=0.169 Sum_probs=150.0
Q ss_pred cEEEccCCCCccCCCCCCCCCCcEEEccCCCCCCCChHHHhCCCCccEEEecCCCCCC-C-CccccCCCCCcEEEccCCC
Q 005708 39 TGISLMFNDIHEVPDELECPKLQALFLQENSPLAIPDRFFQGMKDLKVLDLGGIRGFS-L-PSSLSFLINLRTLSLHDCR 116 (681)
Q Consensus 39 r~L~l~~~~~~~l~~~~~~~~Lr~L~l~~~~~~~l~~~~~~~l~~Lr~L~L~~~~~~~-l-p~~i~~l~~L~~L~L~~~~ 116 (681)
+.++.++..++.+|..+. +++++|++++|.+..++...|.++++|++|++++|.+.. + +.++.++.+++++.+..+.
T Consensus 11 ~~i~c~~~~l~~iP~~l~-~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~n 89 (242)
T d1xwdc1 11 RVFLCQESKVTEIPSDLP-RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKAN 89 (242)
T ss_dssp SEEEEESCSCSSCCSCSC-SCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECCT
T ss_pred CEEEEeCCCCCCcCCCCC-CCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeeccccccccccccccccccc
Confidence 578888888999987653 589999999999999998889999999999999999854 4 4467899999999987765
Q ss_pred CCCCCc--ccCCCCCccEEEcccCCCcccch--hhcCCccCcEEeccCCCCCCccChhhhcCCC-CCcEEEcccCccccc
Q 005708 117 RFGDLP--LIGELSLLEILDLSESDVSEIPV--SFGRLGHLRLLDLTDCVHLELIPRDVLSSLR-KLEELYMSHSFCHWQ 191 (681)
Q Consensus 117 ~~~~l~--~l~~L~~L~~L~l~~~~i~~lp~--~i~~l~~L~~L~L~~~~~~~~~~~~~l~~l~-~L~~L~l~~~~~~~~ 191 (681)
.+..++ .+.++++|++|+++++.+...+. .+..+..+..+...+ ..+..++...+.++. .++.|+++++.+.
T Consensus 90 ~l~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~~~~~l~~l~~~~~~n-~~l~~i~~~~~~~~~~~l~~L~l~~n~l~-- 166 (242)
T d1xwdc1 90 NLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDN-INIHTIERNSFVGLSFESVILWLNKNGIQ-- 166 (242)
T ss_dssp TCCEECTTSEECCTTCCEEEEESCCCCSCCCCTTTCBSSCEEEEEESC-TTCCEECTTSSTTSBSSCEEEECCSSCCC--
T ss_pred cccccccccccccccccccccchhhhcccccccccccccccccccccc-cccccccccccccccccceeeeccccccc--
Confidence 465554 78999999999999999987653 334455555555555 456667655456554 7889999887542
Q ss_pred ccchhhhhhccchhhhcCCCCCcEEE-EeCCCCCCCCCC--CCCCCccEEEEEecCCcCCCc
Q 005708 192 FESEEDARSNAKFIELGALSRLTSLH-IDIPKGKIMPSD--MSFQNLTSFSIKIGDLEEDPL 250 (681)
Q Consensus 192 ~~~~~~~~~~~~~~~l~~l~~L~~L~-l~~~~~~~~~~~--~~l~~L~~L~l~~~~~~~~~~ 250 (681)
..........++..+. +.++.++.+|.+ ..+++|+.|++.++.....+.
T Consensus 167 ----------~i~~~~~~~~~l~~~~~l~~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~ 218 (242)
T d1xwdc1 167 ----------EIHNCAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPS 218 (242)
T ss_dssp ----------EECTTTTTTCCEEEEECTTCTTCCCCCTTTTTTSCCCSEEECTTSCCCCCCS
T ss_pred ----------ccccccccchhhhccccccccccccccHHHhcCCCCCCEEECCCCcCCccCH
Confidence 3333444556666554 566778888875 678999999998887766654
No 28
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.34 E-value=2.2e-12 Score=117.54 Aligned_cols=124 Identities=19% Similarity=0.144 Sum_probs=102.7
Q ss_pred CcEEEccCCCCCCCChHHHhCCCCccEEEecCCCCCC-C-CccccCCCCCcEEEccCCCCCCCCc--ccCCCCCccEEEc
Q 005708 60 LQALFLQENSPLAIPDRFFQGMKDLKVLDLGGIRGFS-L-PSSLSFLINLRTLSLHDCRRFGDLP--LIGELSLLEILDL 135 (681)
Q Consensus 60 Lr~L~l~~~~~~~l~~~~~~~l~~Lr~L~L~~~~~~~-l-p~~i~~l~~L~~L~L~~~~~~~~l~--~l~~L~~L~~L~l 135 (681)
.++++.+++.++.+|.++ .+++++|+|++|++.. + +..|+++++|++|++++|. +..++ .+..+++|++|++
T Consensus 10 ~~~v~Cs~~~L~~iP~~l---p~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~-i~~~~~~~~~~~~~L~~L~L 85 (192)
T d1w8aa_ 10 GTTVDCTGRGLKEIPRDI---PLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQ-LTGIEPNAFEGASHIQELQL 85 (192)
T ss_dssp TTEEECTTSCCSSCCSCC---CTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSC-CCCBCTTTTTTCTTCCEEEC
T ss_pred CCEEEEeCCCcCccCCCC---CCCCCEEEeCCCCCcccccccccCCCceEeeeeccccc-cccccccccccccccceeee
Confidence 457889999999999765 3689999999999954 4 4567899999999999998 55554 8888999999999
Q ss_pred ccCCCcccch-hhcCCccCcEEeccCCCCCCccChhhhcCCCCCcEEEcccCcc
Q 005708 136 SESDVSEIPV-SFGRLGHLRLLDLTDCVHLELIPRDVLSSLRKLEELYMSHSFC 188 (681)
Q Consensus 136 ~~~~i~~lp~-~i~~l~~L~~L~L~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~ 188 (681)
++|+++.+|. .|.++++|++|+|++ +.+..++++.|..+++|++|++++|..
T Consensus 86 s~N~l~~l~~~~F~~l~~L~~L~L~~-N~l~~i~~~~f~~l~~L~~l~L~~N~~ 138 (192)
T d1w8aa_ 86 GENKIKEISNKMFLGLHQLKTLNLYD-NQISCVMPGSFEHLNSLTSLNLASNPF 138 (192)
T ss_dssp CSCCCCEECSSSSTTCTTCCEEECCS-SCCCEECTTSSTTCTTCCEEECTTCCB
T ss_pred ccccccccCHHHHhCCCcccccccCC-ccccccCHHHhcCCccccccccccccc
Confidence 9999998865 588899999999999 456778777788889999999888754
No 29
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.23 E-value=5.4e-14 Score=128.63 Aligned_cols=107 Identities=26% Similarity=0.247 Sum_probs=59.8
Q ss_pred HhCCCCccEEEecCCCCCCCCccccCCCCCcEEEccCCCCCCCCcc-cCCCCCccEEEcccCCCcccchhhcCCccCcEE
Q 005708 78 FQGMKDLKVLDLGGIRGFSLPSSLSFLINLRTLSLHDCRRFGDLPL-IGELSLLEILDLSESDVSEIPVSFGRLGHLRLL 156 (681)
Q Consensus 78 ~~~l~~Lr~L~L~~~~~~~lp~~i~~l~~L~~L~L~~~~~~~~l~~-l~~L~~L~~L~l~~~~i~~lp~~i~~l~~L~~L 156 (681)
++.+++|++|++++|++..++ .+..+++|++|++++|. ++.+|. ...+++|++|++++|.++.++ .+..+++|++|
T Consensus 44 l~~L~~L~~L~Ls~n~I~~i~-~l~~l~~L~~L~Ls~N~-i~~i~~~~~~~~~L~~L~l~~N~i~~l~-~~~~l~~L~~L 120 (198)
T d1m9la_ 44 LSTLKACKHLALSTNNIEKIS-SLSGMENLRILSLGRNL-IKKIENLDAVADTLEELWISYNQIASLS-GIEKLVNLRVL 120 (198)
T ss_dssp HHHTTTCCEEECSEEEESCCC-CHHHHTTCCEEECCEEE-ECSCSSHHHHHHHCCEEECSEEECCCHH-HHHHHHHSSEE
T ss_pred HhcccccceeECcccCCCCcc-cccCCccccChhhcccc-cccccccccccccccccccccccccccc-ccccccccccc
Confidence 455666666666666665554 35566666666666665 555552 233445666666666666553 35556666666
Q ss_pred eccCCCCCCccCh-hhhcCCCCCcEEEcccCcc
Q 005708 157 DLTDCVHLELIPR-DVLSSLRKLEELYMSHSFC 188 (681)
Q Consensus 157 ~L~~~~~~~~~~~-~~l~~l~~L~~L~l~~~~~ 188 (681)
++++|. +..++. ..+..+++|+.|++++|.+
T Consensus 121 ~L~~N~-i~~~~~~~~l~~l~~L~~L~L~~N~l 152 (198)
T d1m9la_ 121 YMSNNK-ITNWGEIDKLAALDKLEDLLLAGNPL 152 (198)
T ss_dssp EESEEE-CCCHHHHHHHTTTTTCSEEEECSSHH
T ss_pred ccccch-hccccccccccCCCccceeecCCCcc
Confidence 666632 333332 2255666666666666543
No 30
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.12 E-value=1e-12 Score=137.89 Aligned_cols=102 Identities=19% Similarity=0.216 Sum_probs=50.5
Q ss_pred CCcEEEccCCCCCCCC-hHHHhCCCCccEEEecCCCCC-----CCCccccCCCCCcEEEccCCCCCCCCc------ccC-
Q 005708 59 KLQALFLQENSPLAIP-DRFFQGMKDLKVLDLGGIRGF-----SLPSSLSFLINLRTLSLHDCRRFGDLP------LIG- 125 (681)
Q Consensus 59 ~Lr~L~l~~~~~~~l~-~~~~~~l~~Lr~L~L~~~~~~-----~lp~~i~~l~~L~~L~L~~~~~~~~l~------~l~- 125 (681)
+|++|+++++.++... ..++..++++|+|+|++|.++ .++..+..+++|++|++++|. +++.+ .+.
T Consensus 3 ~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~-i~~~~~~~l~~~l~~ 81 (460)
T d1z7xw1 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNE-LGDVGVHCVLQGLQT 81 (460)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCC-CHHHHHHHHHHTTCS
T ss_pred CCCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCc-CChHHHHHHHHHHhc
Confidence 3555555555555321 223455566666666666553 223344555566666666554 33211 111
Q ss_pred CCCCccEEEcccCCCcc-----cchhhcCCccCcEEeccCC
Q 005708 126 ELSLLEILDLSESDVSE-----IPVSFGRLGHLRLLDLTDC 161 (681)
Q Consensus 126 ~L~~L~~L~l~~~~i~~-----lp~~i~~l~~L~~L~L~~~ 161 (681)
...+|++|++++|.++. ++..+..+++|++|++++|
T Consensus 82 ~~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N 122 (460)
T d1z7xw1 82 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDN 122 (460)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSS
T ss_pred CCCCCCEEECCCCCccccccccccchhhccccccccccccc
Confidence 12346666666655542 3344555566666666554
No 31
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.04 E-value=9.2e-12 Score=113.47 Aligned_cols=127 Identities=20% Similarity=0.212 Sum_probs=104.5
Q ss_pred CccEEEecCC--CCCCCCccccCCCCCcEEEccCCCCCCCCcccCCCCCccEEEcccCCCcccchhhcCCccCcEEeccC
Q 005708 83 DLKVLDLGGI--RGFSLPSSLSFLINLRTLSLHDCRRFGDLPLIGELSLLEILDLSESDVSEIPVSFGRLGHLRLLDLTD 160 (681)
Q Consensus 83 ~Lr~L~L~~~--~~~~lp~~i~~l~~L~~L~L~~~~~~~~l~~l~~L~~L~~L~l~~~~i~~lp~~i~~l~~L~~L~L~~ 160 (681)
.++.+++.+. .+..++.+++.+.+|++|++++|. ++.++.++++++|++|++++|.++.+|..+..+++|++|++++
T Consensus 24 ~~~~~~l~~~~~~i~~l~~sl~~L~~L~~L~Ls~n~-I~~i~~l~~l~~L~~L~Ls~N~i~~i~~~~~~~~~L~~L~l~~ 102 (198)
T d1m9la_ 24 EAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNN-IEKISSLSGMENLRILSLGRNLIKKIENLDAVADTLEELWISY 102 (198)
T ss_dssp TCSCEECCBCCTTCCCCHHHHHHTTTCCEEECSEEE-ESCCCCHHHHTTCCEEECCEEEECSCSSHHHHHHHCCEEECSE
T ss_pred ccceeeeecccCchhhhhhHHhcccccceeECcccC-CCCcccccCCccccChhhccccccccccccccccccccccccc
Confidence 3455666654 457788889999999999999998 8899989999999999999999999987777778999999999
Q ss_pred CCCCCccChhhhcCCCCCcEEEcccCcccccccchhhhhhccchhhhcCCCCCcEEEEeCCCC
Q 005708 161 CVHLELIPRDVLSSLRKLEELYMSHSFCHWQFESEEDARSNAKFIELGALSRLTSLHIDIPKG 223 (681)
Q Consensus 161 ~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~ 223 (681)
| .+..++. +.++++|+.|++++|.+. ....+..++.+++|+.|++++|.+
T Consensus 103 N-~i~~l~~--~~~l~~L~~L~L~~N~i~----------~~~~~~~l~~l~~L~~L~L~~N~l 152 (198)
T d1m9la_ 103 N-QIASLSG--IEKLVNLRVLYMSNNKIT----------NWGEIDKLAALDKLEDLLLAGNPL 152 (198)
T ss_dssp E-ECCCHHH--HHHHHHSSEEEESEEECC----------CHHHHHHHTTTTTCSEEEECSSHH
T ss_pred c-ccccccc--ccccccccccccccchhc----------cccccccccCCCccceeecCCCcc
Confidence 5 5666654 788999999999998642 112245689999999999999865
No 32
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.94 E-value=2.3e-09 Score=93.00 Aligned_cols=100 Identities=18% Similarity=0.185 Sum_probs=49.4
Q ss_pred EEEccCCCCccCCCCC-CCCCCcEEEccCC-CCCCCChHHHhCCCCccEEEecCCCCCCC-CccccCCCCCcEEEccCCC
Q 005708 40 GISLMFNDIHEVPDEL-ECPKLQALFLQEN-SPLAIPDRFFQGMKDLKVLDLGGIRGFSL-PSSLSFLINLRTLSLHDCR 116 (681)
Q Consensus 40 ~L~l~~~~~~~l~~~~-~~~~Lr~L~l~~~-~~~~l~~~~~~~l~~Lr~L~L~~~~~~~l-p~~i~~l~~L~~L~L~~~~ 116 (681)
.++.+++.+..++..+ .+++|+.|++.++ .+..++...|..+++|+.|++++|++..+ |.+|..+++|++|+|++|+
T Consensus 12 ~l~c~~~~~~~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~ 91 (156)
T d2ifga3 12 GLRCTRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNA 91 (156)
T ss_dssp CEECCSSCCCTTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSC
T ss_pred eEEecCCCCccCcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceeccCCC
Confidence 3445555554444444 4555555555443 35555555455555555555555555444 3334555555555555555
Q ss_pred CCCCCc-ccCCCCCccEEEcccCCC
Q 005708 117 RFGDLP-LIGELSLLEILDLSESDV 140 (681)
Q Consensus 117 ~~~~l~-~l~~L~~L~~L~l~~~~i 140 (681)
++.+| ......+|++|++++|.+
T Consensus 92 -l~~l~~~~~~~~~l~~L~L~~Np~ 115 (156)
T d2ifga3 92 -LESLSWKTVQGLSLQELVLSGNPL 115 (156)
T ss_dssp -CSCCCSTTTCSCCCCEEECCSSCC
T ss_pred -CcccChhhhccccccccccCCCcc
Confidence 44444 222222455555554443
No 33
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.94 E-value=1.2e-10 Score=121.58 Aligned_cols=386 Identities=16% Similarity=0.068 Sum_probs=203.4
Q ss_pred CccEEEccCCCCccC--CCCC-CCCCCcEEEccCCCCCCCC----hHHHhCCCCccEEEecCCCCCC-----CCcccc-C
Q 005708 37 DLTGISLMFNDIHEV--PDEL-ECPKLQALFLQENSPLAIP----DRFFQGMKDLKVLDLGGIRGFS-----LPSSLS-F 103 (681)
Q Consensus 37 ~lr~L~l~~~~~~~l--~~~~-~~~~Lr~L~l~~~~~~~l~----~~~~~~l~~Lr~L~L~~~~~~~-----lp~~i~-~ 103 (681)
+|+.|++++++++.. .... .++++|+|.+++|.++.-. ...+..+++|++|+|++|.++. +...+. .
T Consensus 3 ~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~~ 82 (460)
T d1z7xw1 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTP 82 (460)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCST
T ss_pred CCCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhcC
Confidence 688999999999742 2222 6799999999999887221 2235789999999999998842 223332 2
Q ss_pred CCCCcEEEccCCCCCCCC-----c-ccCCCCCccEEEcccCCCccc-----chhhcC-CccCcEEeccCCCCCCccC---
Q 005708 104 LINLRTLSLHDCRRFGDL-----P-LIGELSLLEILDLSESDVSEI-----PVSFGR-LGHLRLLDLTDCVHLELIP--- 168 (681)
Q Consensus 104 l~~L~~L~L~~~~~~~~l-----~-~l~~L~~L~~L~l~~~~i~~l-----p~~i~~-l~~L~~L~L~~~~~~~~~~--- 168 (681)
..+|++|++++|. +++. + .+..+++|++|++++|.+... +..+.. ............... ...
T Consensus 83 ~~~L~~L~L~~n~-it~~~~~~l~~~l~~~~~L~~L~L~~N~i~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~-~~~~~~ 160 (460)
T d1z7xw1 83 SCKIQKLSLQNCC-LTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLS-AASCEP 160 (460)
T ss_dssp TCCCCEEECTTSC-CBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCB-GGGHHH
T ss_pred CCCCCEEECCCCC-ccccccccccchhhccccccccccccccchhhhhhhhhhcccccccccccccccccccc-hhhhcc
Confidence 3579999999998 6553 3 578899999999999988632 222222 223334444332211 111
Q ss_pred -hhhhcCCCCCcEEEcccCcccccccchhhhhhccchhhhc-CCCCCcEEEEeCCCCCCCCC------CCCCCCccEEEE
Q 005708 169 -RDVLSSLRKLEELYMSHSFCHWQFESEEDARSNAKFIELG-ALSRLTSLHIDIPKGKIMPS------DMSFQNLTSFSI 240 (681)
Q Consensus 169 -~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~l~-~l~~L~~L~l~~~~~~~~~~------~~~l~~L~~L~l 240 (681)
...+.....++.+.++++..... ........+. .......+.+..+....... ......++.+.+
T Consensus 161 ~~~~l~~~~~~~~~~ls~~~~~~~-------~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~ 233 (460)
T d1z7xw1 161 LASVLRAKPDFKELTVSNNDINEA-------GVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELAL 233 (460)
T ss_dssp HHHHHHHCTTCCEEECCSSBCHHH-------HHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEEC
T ss_pred cccccccccccccccccccccccc-------cccccccccccccccccccccccccccchhhhcccccccccccccccch
Confidence 11134556777777766543110 0001111121 22244455555544321110 023345555555
Q ss_pred EecCCcCCCchhHHHHHhhhc-cccccceeeeccccchhhhHHHHH---HHHhccceeecccccCccccccccc---ccc
Q 005708 241 KIGDLEEDPLSDFIELFLEKF-NKRCSRAMGLSQDMRISALHSWIK---NLLLRSEILALAEVNDLENMVSDLA---NDG 313 (681)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~-~~~~l~~l~l~~~~~~~~~~~~~~---~~~~~L~~L~l~~~~~~~~~~~~l~---~~~ 313 (681)
..+.... ......+.... ....++.+.+.++.-......... ...+.++.+++.++.........+. ...
T Consensus 234 ~~n~~~~---~~~~~~~~~~~~~~~~l~~l~l~~n~i~~~~~~~~~~~l~~~~~l~~l~l~~n~i~~~~~~~l~~~l~~~ 310 (460)
T d1z7xw1 234 GSNKLGD---VGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEP 310 (460)
T ss_dssp CSSBCHH---HHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTST
T ss_pred hhccccc---cccchhhcccccccccccccccccccccccccccccccccccccccccccccccccccccchhhcccccc
Confidence 4433211 01111111122 345677777766532221111111 2246677777755542211111111 112
Q ss_pred cCCCcEEEEEecCCceEeeeccccccccccCccceeeecccccccccccCcCC---CCcCCCccEEEEeeCCCCCcccc-
Q 005708 314 FNELMFLVIVRCNEMKCLVNSLERTRRVTLHKLEWLAIFLNQNLVEICHGQLP---AGCLSNVKRLDVGDCGSMLKILP- 389 (681)
Q Consensus 314 ~~~L~~L~l~~~~~l~~l~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~---~~~~~~L~~L~l~~c~~l~~~~~- 389 (681)
.+.|+.+.+.++. +...............++|++|+++++. +.......+. ....+.|+.|++++| .+++...
T Consensus 311 ~~~L~~l~l~~~~-l~~~~~~~l~~~~~~~~~L~~L~Ls~N~-i~~~g~~~l~~~l~~~~~~L~~L~Ls~n-~i~~~~~~ 387 (460)
T d1z7xw1 311 GCQLESLWVKSCS-FTAACCSHFSSVLAQNRFLLELQISNNR-LEDAGVRELCQGLGQPGSVLRVLWLADC-DVSDSSCS 387 (460)
T ss_dssp TCCCCEEECTTSC-CBGGGHHHHHHHHHHCSSCCEEECCSSB-CHHHHHHHHHHHHTSTTCCCCEEECTTS-CCCHHHHH
T ss_pred ccccccccccccc-hhhhhhhhcccccccccchhhhheeeec-ccCcccchhhhhhhcccCCCCEEECCCC-CCChHHHH
Confidence 4678999988873 3211000000022345689999999874 4321000110 013467999999998 5665321
Q ss_pred --chHHhhcCCCcEEEEeeccCcceeecccccccccccc-cccCccCEEeeccCCC
Q 005708 390 --SHLVQSFQNLQRLRVGRCELLESVFEIERVNIAKEET-ELFSSLEKLTLIDLPR 442 (681)
Q Consensus 390 --~~~~~~l~~L~~L~l~~c~~l~~~~~~~~~~~~~~~~-~~~~~L~~L~l~~~~~ 442 (681)
...+..+++|++|+++++. +..-.. ..-...+ ..-.+|+.|.+.++.-
T Consensus 388 ~l~~~l~~~~~L~~L~Ls~N~-i~~~g~----~~l~~~l~~~~~~L~~l~l~~~~~ 438 (460)
T d1z7xw1 388 SLAATLLANHSLRELDLSNNC-LGDAGI----LQLVESVRQPGCLLEQLVLYDIYW 438 (460)
T ss_dssp HHHHHHHHCCCCCEEECCSSS-CCHHHH----HHHHHHHTSTTCCCCEEECTTCCC
T ss_pred HHHHHHhcCCCCCEEECCCCc-CCHHHH----HHHHHHHHhCCCccCEEECCCCCC
Confidence 1234567999999999864 432110 0000011 1234799999998654
No 34
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.92 E-value=2.2e-09 Score=93.12 Aligned_cols=99 Identities=20% Similarity=0.150 Sum_probs=43.8
Q ss_pred EEecCCCCCCCCccccCCCCCcEEEccCCCCCCCCc--ccCCCCCccEEEcccCCCcccc-hhhcCCccCcEEeccCCCC
Q 005708 87 LDLGGIRGFSLPSSLSFLINLRTLSLHDCRRFGDLP--LIGELSLLEILDLSESDVSEIP-VSFGRLGHLRLLDLTDCVH 163 (681)
Q Consensus 87 L~L~~~~~~~lp~~i~~l~~L~~L~L~~~~~~~~l~--~l~~L~~L~~L~l~~~~i~~lp-~~i~~l~~L~~L~L~~~~~ 163 (681)
++.+++.+.+.|..+..+++|+.|++.+++.++.++ .|.++++|+.|++++|+++.++ ..|..+++|++|+|++ +.
T Consensus 13 l~c~~~~~~~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~-N~ 91 (156)
T d2ifga3 13 LRCTRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF-NA 91 (156)
T ss_dssp EECCSSCCCTTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS-SC
T ss_pred EEecCCCCccCcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceeccC-CC
Confidence 344444444444444444444444444433344443 3444444555555554454442 2344455555555555 22
Q ss_pred CCccChhhhcCCCCCcEEEcccCc
Q 005708 164 LELIPRDVLSSLRKLEELYMSHSF 187 (681)
Q Consensus 164 ~~~~~~~~l~~l~~L~~L~l~~~~ 187 (681)
+..+|.+.+.. .+|++|++++|.
T Consensus 92 l~~l~~~~~~~-~~l~~L~L~~Np 114 (156)
T d2ifga3 92 LESLSWKTVQG-LSLQELVLSGNP 114 (156)
T ss_dssp CSCCCSTTTCS-CCCCEEECCSSC
T ss_pred CcccChhhhcc-ccccccccCCCc
Confidence 33444442222 245555555443
No 35
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=98.83 E-value=8.5e-10 Score=110.36 Aligned_cols=184 Identities=15% Similarity=0.058 Sum_probs=110.4
Q ss_pred CCCCCCccEEEccCCCCc-----cCCCCC-CCCCCcEEEccCCCCCCCC----h------HHHhCCCCccEEEecCCCCC
Q 005708 32 INTFEDLTGISLMFNDIH-----EVPDEL-ECPKLQALFLQENSPLAIP----D------RFFQGMKDLKVLDLGGIRGF 95 (681)
Q Consensus 32 ~~~l~~lr~L~l~~~~~~-----~l~~~~-~~~~Lr~L~l~~~~~~~l~----~------~~~~~l~~Lr~L~L~~~~~~ 95 (681)
+....+++.|++++|.+. .+.... ..++|+.|.++++...... . ..+..+++|+.|+|++|.++
T Consensus 27 L~~~~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~~n~i~ 106 (344)
T d2ca6a1 27 LLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFG 106 (344)
T ss_dssp HHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCC
T ss_pred HhhCCCCCEEECcCCcCCHHHHHHHHHHHHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCcccccccccccc
Confidence 444567888888887764 222223 5678888888776544221 1 12456778888888888774
Q ss_pred C-----CCccccCCCCCcEEEccCCCCCCCCc---------------ccCCCCCccEEEcccCCCc-----ccchhhcCC
Q 005708 96 S-----LPSSLSFLINLRTLSLHDCRRFGDLP---------------LIGELSLLEILDLSESDVS-----EIPVSFGRL 150 (681)
Q Consensus 96 ~-----lp~~i~~l~~L~~L~L~~~~~~~~l~---------------~l~~L~~L~~L~l~~~~i~-----~lp~~i~~l 150 (681)
. +...+..+++|++|++++|. ++... .....+.|+.++++++.+. .+...+...
T Consensus 107 ~~~~~~l~~~l~~~~~L~~L~l~~n~-l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~l~~~l~~~ 185 (344)
T d2ca6a1 107 PTAQEPLIDFLSKHTPLEHLYLHNNG-LGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSH 185 (344)
T ss_dssp TTTHHHHHHHHHHCTTCCEEECCSSC-CHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHC
T ss_pred cccccchhhhhcccccchheeccccc-ccccccccccccccccccccccccCcccceeecccccccccccccccchhhhh
Confidence 3 23345567788888888776 32210 1235567788888777665 334445667
Q ss_pred ccCcEEeccCCCCCCc----cChhhhcCCCCCcEEEcccCcccccccchhhhhhccchhhhcCCCCCcEEEEeCCCC
Q 005708 151 GHLRLLDLTDCVHLEL----IPRDVLSSLRKLEELYMSHSFCHWQFESEEDARSNAKFIELGALSRLTSLHIDIPKG 223 (681)
Q Consensus 151 ~~L~~L~L~~~~~~~~----~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~ 223 (681)
++|++|++++|..... .....+...++|+.|++++|.+... ........+..+++|++|++++|.+
T Consensus 186 ~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~-------g~~~L~~~l~~~~~L~~L~Ls~n~i 255 (344)
T d2ca6a1 186 RLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHL-------GSSALAIALKSWPNLRELGLNDCLL 255 (344)
T ss_dssp TTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHH-------HHHHHHHHGGGCTTCCEEECTTCCC
T ss_pred hhhcccccccccccccccccchhhhhcchhhhccccccccccccc-------ccccccccccccccchhhhhhcCcc
Confidence 7788888877543211 1111245677788888877653110 1123445667777788887777765
No 36
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=98.64 E-value=4.7e-09 Score=104.82 Aligned_cols=208 Identities=17% Similarity=0.170 Sum_probs=137.2
Q ss_pred CCCCCCCccEEEccCCCCccCCC-----------C-CCCCCCcEEEccCCCCCCCC----hHHHhCCCCccEEEecCCCC
Q 005708 31 SINTFEDLTGISLMFNDIHEVPD-----------E-LECPKLQALFLQENSPLAIP----DRFFQGMKDLKVLDLGGIRG 94 (681)
Q Consensus 31 ~~~~l~~lr~L~l~~~~~~~l~~-----------~-~~~~~Lr~L~l~~~~~~~l~----~~~~~~l~~Lr~L~L~~~~~ 94 (681)
.+...++++.++++++....... . ..+++|+.|++++|.+.... ...+...++|++|++++|.+
T Consensus 54 ~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~n~l 133 (344)
T d2ca6a1 54 NIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGL 133 (344)
T ss_dssp TTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCC
T ss_pred HHHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCcccccccccccccccccchhhhhcccccchheecccccc
Confidence 35677889999998766542211 1 15789999999999876432 12346788999999999876
Q ss_pred CC-----CCcc---------ccCCCCCcEEEccCCCCCCCC-----c-ccCCCCCccEEEcccCCCcc------cchhhc
Q 005708 95 FS-----LPSS---------LSFLINLRTLSLHDCRRFGDL-----P-LIGELSLLEILDLSESDVSE------IPVSFG 148 (681)
Q Consensus 95 ~~-----lp~~---------i~~l~~L~~L~L~~~~~~~~l-----~-~l~~L~~L~~L~l~~~~i~~------lp~~i~ 148 (681)
.. +... ......|+.+.++++. +++- . .+...++|++|++++|.+.. +...+.
T Consensus 134 ~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~-i~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~g~~~~l~~~l~ 212 (344)
T d2ca6a1 134 GPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNR-LENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLA 212 (344)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSC-CTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGG
T ss_pred cccccccccccccccccccccccCcccceeeccccc-ccccccccccchhhhhhhhcccccccccccccccccchhhhhc
Confidence 31 1111 1356789999998887 4432 1 46678889999999988762 334567
Q ss_pred CCccCcEEeccCCCCCC----ccChhhhcCCCCCcEEEcccCcccccccchhhhhhccchhhhcC--CCCCcEEEEeCCC
Q 005708 149 RLGHLRLLDLTDCVHLE----LIPRDVLSSLRKLEELYMSHSFCHWQFESEEDARSNAKFIELGA--LSRLTSLHIDIPK 222 (681)
Q Consensus 149 ~l~~L~~L~L~~~~~~~----~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~l~~--l~~L~~L~l~~~~ 222 (681)
.+++|++|++++|.... .+... +...++|++|++++|.+... ........+.. .+.|++|++++|.
T Consensus 213 ~~~~L~~L~Ls~N~i~~~g~~~L~~~-l~~~~~L~~L~Ls~n~i~~~-------g~~~l~~~l~~~~~~~L~~L~ls~N~ 284 (344)
T d2ca6a1 213 YCQELKVLDLQDNTFTHLGSSALAIA-LKSWPNLRELGLNDCLLSAR-------GAAAVVDAFSKLENIGLQTLRLQYNE 284 (344)
T ss_dssp GCTTCCEEECCSSCCHHHHHHHHHHH-GGGCTTCCEEECTTCCCCHH-------HHHHHHHHHHTCSSCCCCEEECCSSC
T ss_pred chhhhccccccccccccccccccccc-ccccccchhhhhhcCccCch-------hhHHHHHHhhhccCCCCCEEECCCCc
Confidence 78899999999865321 12222 67888999999998864211 12233444544 3578999999988
Q ss_pred CCC-----CCCC--CCCCCccEEEEEecCCcC
Q 005708 223 GKI-----MPSD--MSFQNLTSFSIKIGDLEE 247 (681)
Q Consensus 223 ~~~-----~~~~--~~l~~L~~L~l~~~~~~~ 247 (681)
+.. +... ...++|+.|++.++....
T Consensus 285 i~~~~~~~l~~~l~~~~~~L~~L~l~~N~~~~ 316 (344)
T d2ca6a1 285 IELDAVRTLKTVIDEKMPDLLFLELNGNRFSE 316 (344)
T ss_dssp CBHHHHHHHHHHHHHHCTTCCEEECTTSBSCT
T ss_pred CChHHHHHHHHHHHccCCCCCEEECCCCcCCC
Confidence 642 1111 245788888887765543
No 37
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.71 E-value=6.2e-07 Score=77.82 Aligned_cols=82 Identities=23% Similarity=0.131 Sum_probs=58.3
Q ss_pred hHHHhCCCCccEEEecCCCCCCCC---ccccCCCCCcEEEccCCCCCCCCcc--cCCCCCccEEEcccCCCcccc-----
Q 005708 75 DRFFQGMKDLKVLDLGGIRGFSLP---SSLSFLINLRTLSLHDCRRFGDLPL--IGELSLLEILDLSESDVSEIP----- 144 (681)
Q Consensus 75 ~~~~~~l~~Lr~L~L~~~~~~~lp---~~i~~l~~L~~L~L~~~~~~~~l~~--l~~L~~L~~L~l~~~~i~~lp----- 144 (681)
..++..+++|++|++++|++..++ ..+..+++|++|++++|. +++++. ..+..+|+.|++++|.+....
T Consensus 58 ~~~~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~-i~~l~~l~~l~~~~L~~L~L~~Npl~~~~~~~~~ 136 (162)
T d1koha1 58 RIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNE-LKSERELDKIKGLKLEELWLDGNSLSDTFRDQST 136 (162)
T ss_dssp HHHHHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSC-CCCGGGHHHHTTCCCSSCCCTTSTTSSSSSSHHH
T ss_pred HHHHHhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCc-cccchhhhhhhccccceeecCCCCcCcCcccchh
Confidence 344567888888888888886654 345678888888888888 777762 223456888888888776432
Q ss_pred ---hhhcCCccCcEEe
Q 005708 145 ---VSFGRLGHLRLLD 157 (681)
Q Consensus 145 ---~~i~~l~~L~~L~ 157 (681)
..+..+++|++||
T Consensus 137 y~~~i~~~~P~L~~LD 152 (162)
T d1koha1 137 YISAIRERFPKLLRLD 152 (162)
T ss_dssp HHHHHHTTSTTCCEET
T ss_pred HHHHHHHHCCCCCEEC
Confidence 2356788888885
No 38
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.66 E-value=1.3e-06 Score=75.75 Aligned_cols=82 Identities=20% Similarity=0.119 Sum_probs=53.8
Q ss_pred cccCCCCCcEEEccCCCCCCCCc----ccCCCCCccEEEcccCCCcccch-hhcCCccCcEEeccCCCCCCccCh-----
Q 005708 100 SLSFLINLRTLSLHDCRRFGDLP----LIGELSLLEILDLSESDVSEIPV-SFGRLGHLRLLDLTDCVHLELIPR----- 169 (681)
Q Consensus 100 ~i~~l~~L~~L~L~~~~~~~~l~----~l~~L~~L~~L~l~~~~i~~lp~-~i~~l~~L~~L~L~~~~~~~~~~~----- 169 (681)
....+++|++|++++|+ ++.++ .+..+++|++|++++|.++.++. ...+..+|++|++++|+.......
T Consensus 60 ~~~~~~~L~~L~Ls~N~-i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl~~~~~~~~~y~ 138 (162)
T d1koha1 60 IEENIPELLSLNLSNNR-LYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQSTYI 138 (162)
T ss_dssp HHHHCTTCCCCCCCSSC-CCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTCCCSSCCCTTSTTSSSSSSHHHHH
T ss_pred HHHhCCCCCEeeCCCcc-ccCCchhHHHHhhCCcccccccccCccccchhhhhhhccccceeecCCCCcCcCcccchhHH
Confidence 34567788888888887 66654 34567888888888888877754 333445678888888655433221
Q ss_pred -hhhcCCCCCcEEE
Q 005708 170 -DVLSSLRKLEELY 182 (681)
Q Consensus 170 -~~l~~l~~L~~L~ 182 (681)
.++..+++|+.||
T Consensus 139 ~~i~~~~P~L~~LD 152 (162)
T d1koha1 139 SAIRERFPKLLRLD 152 (162)
T ss_dssp HHHHTTSTTCCEET
T ss_pred HHHHHHCCCCCEEC
Confidence 2355677787776
No 39
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=97.00 E-value=0.00032 Score=60.39 Aligned_cols=38 Identities=16% Similarity=0.086 Sum_probs=17.0
Q ss_pred hCCCCccEEEecCCCCC-----CCCccccCCCCCcEEEccCCC
Q 005708 79 QGMKDLKVLDLGGIRGF-----SLPSSLSFLINLRTLSLHDCR 116 (681)
Q Consensus 79 ~~l~~Lr~L~L~~~~~~-----~lp~~i~~l~~L~~L~L~~~~ 116 (681)
...++|++|+|++|.++ .+...+...+.|++|++++|.
T Consensus 41 ~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~ 83 (167)
T d1pgva_ 41 CNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNF 83 (167)
T ss_dssp TTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSB
T ss_pred hhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhh
Confidence 34455555555555442 112223334445555554444
No 40
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=96.91 E-value=0.00039 Score=59.79 Aligned_cols=38 Identities=21% Similarity=0.239 Sum_probs=19.2
Q ss_pred hCCCCccEEEecCC-CCC-----CCCccccCCCCCcEEEccCCC
Q 005708 79 QGMKDLKVLDLGGI-RGF-----SLPSSLSFLINLRTLSLHDCR 116 (681)
Q Consensus 79 ~~l~~Lr~L~L~~~-~~~-----~lp~~i~~l~~L~~L~L~~~~ 116 (681)
.+.+.|+.|+|+++ .++ .+-..+....+|++|++++|.
T Consensus 12 ~n~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~ 55 (167)
T d1pgva_ 12 EDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTA 55 (167)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSC
T ss_pred hCCCCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccc
Confidence 34566666666653 231 122234445556666666554
No 41
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=96.54 E-value=0.0011 Score=56.77 Aligned_cols=90 Identities=10% Similarity=0.008 Sum_probs=38.7
Q ss_pred CCCCccEEEcccCCCc-----ccchhhcCCccCcEEeccCCCCCCc----cChhhhcCCCCCcEEEcccCcccccccchh
Q 005708 126 ELSLLEILDLSESDVS-----EIPVSFGRLGHLRLLDLTDCVHLEL----IPRDVLSSLRKLEELYMSHSFCHWQFESEE 196 (681)
Q Consensus 126 ~L~~L~~L~l~~~~i~-----~lp~~i~~l~~L~~L~L~~~~~~~~----~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~ 196 (681)
..++|++|++++|.+. .+...+...+.++.+++++|..... +... +...++|+.++++.+.....-.
T Consensus 44 ~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~l~~~-l~~~~~L~~l~L~l~~n~i~~~--- 119 (166)
T d1io0a_ 44 TNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEA-LQSNTSLIELRIDNQSQPLGNN--- 119 (166)
T ss_dssp TCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHG-GGGCSSCCEEECCCCSSCCCHH---
T ss_pred cCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHHHHHHH-HHhCccccEEeeccCCCcCcHH---
Confidence 3444444444444443 2223344455555555555432211 1111 3445556555553321110000
Q ss_pred hhhhccchhhhcCCCCCcEEEEeCC
Q 005708 197 DARSNAKFIELGALSRLTSLHIDIP 221 (681)
Q Consensus 197 ~~~~~~~~~~l~~l~~L~~L~l~~~ 221 (681)
....+...+...+.|++|++.++
T Consensus 120 --~~~~La~~L~~n~~L~~L~l~~~ 142 (166)
T d1io0a_ 120 --VEMEIANMLEKNTTLLKFGYHFT 142 (166)
T ss_dssp --HHHHHHHHHHHCSSCCEEECCCS
T ss_pred --HHHHHHHHHHhCCCcCEEeCcCC
Confidence 12234445566666666666543
No 42
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=96.11 E-value=0.0017 Score=55.62 Aligned_cols=85 Identities=15% Similarity=0.093 Sum_probs=43.3
Q ss_pred ccCCCCCcEEEccCCCCCCCCc------ccCCCCCccEEEcccCCCc-----ccchhhcCCccCcEEeccCCC-CCCc--
Q 005708 101 LSFLINLRTLSLHDCRRFGDLP------LIGELSLLEILDLSESDVS-----EIPVSFGRLGHLRLLDLTDCV-HLEL-- 166 (681)
Q Consensus 101 i~~l~~L~~L~L~~~~~~~~l~------~l~~L~~L~~L~l~~~~i~-----~lp~~i~~l~~L~~L~L~~~~-~~~~-- 166 (681)
+...++|+.|++++|. ++.-. .+...++++.++++++.+. .+...+...++|+.++|..+. .++.
T Consensus 42 l~~n~~L~~L~Ls~n~-l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~l~~~l~~~~~L~~l~L~l~~n~i~~~~ 120 (166)
T d1io0a_ 42 LKTNTYVKKFSIVGTR-SNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNV 120 (166)
T ss_dssp HTTCCSCCEEECTTSC-CCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHH
T ss_pred HhcCCccCeeeccCCc-ccHHHHHHHHHHHhhcccchhhhhccccccchhHHHHHHHHHhCccccEEeeccCCCcCcHHH
Confidence 3344455555555554 22211 2334455566666555543 344556666777766665432 2222
Q ss_pred ---cChhhhcCCCCCcEEEcccCc
Q 005708 167 ---IPRDVLSSLRKLEELYMSHSF 187 (681)
Q Consensus 167 ---~~~~~l~~l~~L~~L~l~~~~ 187 (681)
+... +.+.++|++|+++.+.
T Consensus 121 ~~~La~~-L~~n~~L~~L~l~~~~ 143 (166)
T d1io0a_ 121 EMEIANM-LEKNTTLLKFGYHFTQ 143 (166)
T ss_dssp HHHHHHH-HHHCSSCCEEECCCSS
T ss_pred HHHHHHH-HHhCCCcCEEeCcCCC
Confidence 2222 4567778888776653
Done!