Your job contains 1 sequence.
>005710
MSGRGCSIVWFRRDLRVEDNPALAAGVRAGAVIAVFIWAPEEEGPYYPGRVSRWWLKHSL
SHLDSSLRSLGTSLVTKRSTDSVSSLLEVVKATGATQLFFNHLYDPLSLVRDHRAKEALT
AQGIAVRSFNADLLYEPWDVNDAQGQPFATFAAFWEKCLSMPFDPDAPLLPPKRINSGDM
SRCPSDTLVFEDESEKGSNALLARAWSPGWSNADKALTTFINGPLIEYSKNRRKADSATT
SFLSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNH
PYSHERPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS
FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRIDNPQFEGYKFD
PNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPFPIVRIDAAKCRLDEA
LSEMWQQEAASRAAIENGTEEGLGDSSDSAPIAFPPDIQMEEIPEPARNNLPTTARRYED
QMVPSMTTSLVRVEEEESSLELRNSAEESRAEVPRNANVNQEPRRDTLNQGVLQTVHNNN
AFQQFNAAIVLANAEDSTAESSSTSRRERDGGVVPVWSPATSSYSEQLVGDENGIGTSSS
YLQRHPQSHQIMNCRRLSQTG
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 005710
(681 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2138728 - symbol:CRY1 "cryptochrome 1" species... 2539 6.5e-264 1
TAIR|locus:2018254 - symbol:CRY2 "cryptochrome 2" species... 1566 8.4e-161 1
TIGR_CMR|CBU_1176 - symbol:CBU_1176 "deoxyribodipyrimidin... 772 1.1e-76 1
TIGR_CMR|BA_3180 - symbol:BA_3180 "deoxyribodipyrimidine ... 739 3.6e-73 1
UNIPROTKB|Q9KNA8 - symbol:phrA "Deoxyribodipyrimidine pho... 515 2.0e-49 1
TIGR_CMR|VC_A0057 - symbol:VC_A0057 "deoxyribodipyrimidin... 515 2.0e-49 1
TIGR_CMR|SPO_1917 - symbol:SPO_1917 "deoxyribodipyrimidin... 506 1.8e-48 1
UNIPROTKB|P00914 - symbol:phr "deoxyribodipyrimidine phot... 504 2.9e-48 1
UNIPROTKB|Q48MU1 - symbol:phrB "Deoxyribodipyrimidine pho... 464 5.0e-44 1
TIGR_CMR|SO_3384 - symbol:SO_3384 "deoxyribodipyrimidine ... 408 7.5e-42 2
ASPGD|ASPL0000053661 - symbol:cryA species:162425 "Emeric... 421 1.8e-39 1
TIGR_CMR|CPS_1380 - symbol:CPS_1380 "deoxyribodipyrimidin... 387 5.0e-39 2
ZFIN|ZDB-GENE-120215-243 - symbol:si:ch73-25i22.2 "si:ch7... 386 2.2e-35 1
UNIPROTKB|F1N0J9 - symbol:Bt.20450 "Uncharacterized prote... 387 1.4e-33 1
UNIPROTKB|Q8QG60 - symbol:CRY2 "Cryptochrome-2" species:9... 382 3.9e-33 1
ZFIN|ZDB-GENE-010426-2 - symbol:cry1a "cryptochrome 1a" s... 378 1.8e-32 1
RGD|620935 - symbol:Cry2 "cryptochrome 2 (photolyase-like... 376 2.4e-32 1
UNIPROTKB|Q923I8 - symbol:Cry2 "Cryptochrome-2" species:1... 376 2.4e-32 1
UNIPROTKB|Q49AN0 - symbol:CRY2 "Cryptochrome-2" species:9... 374 4.2e-32 1
UNIPROTKB|B4DZD6 - symbol:CRY2 "Cryptochrome-2" species:9... 374 5.2e-32 1
MGI|MGI:1270859 - symbol:Cry2 "cryptochrome 2 (photolyase... 373 5.4e-32 1
UNIPROTKB|F1PNC9 - symbol:CRY2 "Uncharacterized protein" ... 373 5.5e-32 1
ZFIN|ZDB-GENE-010426-3 - symbol:cry1b "cryptochrome 1b" s... 373 6.3e-32 1
UNIPROTKB|F1SHJ9 - symbol:CRY2 "Uncharacterized protein" ... 371 1.2e-31 1
TAIR|locus:2093217 - symbol:UVR3 "UV REPAIR DEFECTIVE 3" ... 363 5.2e-31 1
UNIPROTKB|Q16526 - symbol:CRY1 "Cryptochrome-1" species:9... 364 5.9e-31 1
RGD|735083 - symbol:Cry1 "cryptochrome 1 (photolyase-like... 363 7.8e-31 1
UNIPROTKB|Q32Q86 - symbol:Cry1 "Cryptochrome-1" species:1... 363 7.8e-31 1
UNIPROTKB|E2RMX4 - symbol:CRY1 "Uncharacterized protein" ... 362 1.0e-30 1
UNIPROTKB|Q70AD6 - symbol:CRY1 "Cryptochrome-1" species:1... 362 1.0e-30 1
UNIPROTKB|F1NYE9 - symbol:CRY1 "Cryptochrome-1" species:9... 363 1.1e-30 1
UNIPROTKB|Q8QG61 - symbol:CRY1 "Cryptochrome-1" species:9... 363 1.1e-30 1
UNIPROTKB|E1C2Z9 - symbol:CRY1 "Cryptochrome-1" species:9... 363 1.1e-30 1
MGI|MGI:1270841 - symbol:Cry1 "cryptochrome 1 (photolyase... 362 1.2e-30 1
UNIPROTKB|Q8WP19 - symbol:CRY1 "Cryptochrome-1" species:9... 361 1.3e-30 1
UNIPROTKB|F1P3P5 - symbol:CRY2 "Cryptochrome-2" species:9... 356 2.4e-30 1
UNIPROTKB|F1NX44 - symbol:CRY2 "Cryptochrome-2" species:9... 356 2.7e-30 1
ZFIN|ZDB-GENE-010426-6 - symbol:cry3 "cryptochrome 3" spe... 358 3.3e-30 1
ZFIN|ZDB-GENE-010426-7 - symbol:cry4 "cryptochrome 4" spe... 356 4.9e-30 1
UNIPROTKB|Q17DK5 - symbol:cry "Cryptochrome-1" species:71... 337 1.0e-29 2
UNIPROTKB|F1SPQ5 - symbol:CRY1 "Uncharacterized protein" ... 353 1.2e-29 1
ZFIN|ZDB-GENE-010426-4 - symbol:cry2a "cryptochrome 2a" s... 348 7.1e-29 1
FB|FBgn0016054 - symbol:phr6-4 "(6-4)-photolyase" species... 324 3.8e-28 2
ZFIN|ZDB-GENE-010426-8 - symbol:cry5 "cryptochrome 5" spe... 338 4.1e-28 1
ZFIN|ZDB-GENE-010426-5 - symbol:cry2b "cryptochrome 2b" s... 340 5.2e-28 1
UNIPROTKB|G4MNA0 - symbol:MGG_02071 "Cryptochrome-1" spec... 284 8.9e-28 3
UNIPROTKB|B0WRR9 - symbol:cry "Cryptochrome-1" species:71... 328 3.3e-27 1
UNIPROTKB|Q293P8 - symbol:cry "Cryptochrome-1" species:46... 300 2.2e-26 2
UNIPROTKB|Q7PYI7 - symbol:Cry1 "Cryptochrome-1" species:7... 303 1.5e-25 2
ZFIN|ZDB-GENE-040617-2 - symbol:cry-dash "cryptochrome DA... 316 2.5e-25 2
FB|FBgn0025680 - symbol:cry "cryptochrome" species:7227 "... 285 4.0e-25 2
UNIPROTKB|Q2TV23 - symbol:LOC395100 "Cryptochrome-like pr... 290 1.5e-22 2
UNIPROTKB|F1P5X2 - symbol:LOC395100 "Uncharacterized prot... 290 1.9e-22 2
UNIPROTKB|F1MXB2 - symbol:CRY1 "Uncharacterized protein" ... 288 2.8e-22 1
SGD|S000005913 - symbol:PHR1 "DNA photolyase involved in ... 282 3.8e-22 2
UNIPROTKB|Q7T3R1 - symbol:LOC395100 "Uncharacterized prot... 230 2.7e-18 1
UNIPROTKB|Q9KR33 - symbol:cry1 "Cryptochrome DASH" specie... 218 5.2e-16 2
TIGR_CMR|VC_1814 - symbol:VC_1814 "RNA-binding cryptochro... 218 5.2e-16 2
>TAIR|locus:2138728 [details] [associations]
symbol:CRY1 "cryptochrome 1" species:3702 "Arabidopsis
thaliana" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0007623 "circadian rhythm" evidence=NAS]
[GO:0009637 "response to blue light" evidence=RCA;IMP;NAS]
[GO:0009785 "blue light signaling pathway" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009640
"photomorphogenesis" evidence=IMP] [GO:0051510 "regulation of
unidimensional cell growth" evidence=IMP] [GO:0004672 "protein
kinase activity" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IDA] [GO:0046777 "protein autophosphorylation"
evidence=RCA;IDA] [GO:0055114 "oxidation-reduction process"
evidence=IMP] [GO:0042802 "identical protein binding" evidence=IPI]
[GO:0042803 "protein homodimerization activity" evidence=IPI]
[GO:0009414 "response to water deprivation" evidence=IGI]
[GO:0010118 "stomatal movement" evidence=IGI] [GO:0010343 "singlet
oxygen-mediated programmed cell death" evidence=IMP] [GO:0046283
"anthocyanin-containing compound metabolic process" evidence=IMP]
[GO:0010617 "circadian regulation of calcium ion oscillation"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0010075
"regulation of meristem growth" evidence=IGI] [GO:0009583
"detection of light stimulus" evidence=IMP] [GO:0010155 "regulation
of proton transport" evidence=RCA] [GO:0009882 "blue light
photoreceptor activity" evidence=IMP] InterPro:IPR002081
InterPro:IPR005101 InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147
PROSITE:PS00394 PROSITE:PS00691 InterPro:IPR006050 Pfam:PF00875
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0009414 GO:GO:0006281 GO:GO:0046777
GO:GO:0009640 GO:GO:0010118 GO:GO:0004672 GO:GO:0018298
GO:GO:0055114 EMBL:AL161513 Gene3D:3.40.50.620 InterPro:IPR014729
EMBL:AF128396 GO:GO:0010075 GO:GO:0046283 GO:GO:0051510
eggNOG:COG0415 GO:GO:0009882 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 PROSITE:PS51645 EMBL:S66907 EMBL:S66909
EMBL:AF361588 EMBL:AY124863 IPI:IPI00529765 PIR:H85089 PIR:S39058
RefSeq:NP_567341.1 UniGene:At.27730 PDB:1U3C PDB:1U3D PDBsum:1U3C
PDBsum:1U3D DisProt:DP00474 ProteinModelPortal:Q43125 SMR:Q43125
IntAct:Q43125 MINT:MINT-192438 STRING:Q43125 PaxDb:Q43125
PRIDE:Q43125 EnsemblPlants:AT4G08920.1 GeneID:826470
KEGG:ath:AT4G08920 TAIR:At4g08920 HOGENOM:HOG000245621
InParanoid:Q43125 KO:K12118 OMA:CKVDFWL ProtClustDB:CLSN2681786
EvolutionaryTrace:Q43125 Genevestigator:Q43125 GermOnline:AT4G08920
GO:GO:0010617 GO:GO:0009583 GO:GO:0010343 InterPro:IPR020978
InterPro:IPR014134 Pfam:PF12546 TIGRFAMs:TIGR02766 Uniprot:Q43125
Length = 681
Score = 2539 (898.8 bits), Expect = 6.5e-264, P = 6.5e-264
Identities = 492/687 (71%), Positives = 537/687 (78%)
Query: 2 SGRGCSIVWFRRDLRVEDNPXXXXXXXXXXXXXXFIWAPEEEGPYYPGRVSRWWXXXXXX 61
SG GCSIVWFRRDLRVEDNP F+WAPEEEG Y+PGRVSRWW
Sbjct: 10 SG-GCSIVWFRRDLRVEDNPALAAAVRAGPVIALFVWAPEEEGHYHPGRVSRWWLKNSLA 68
Query: 62 XXXXXXXXXGTSLVTKRSTDSVSSLLEVVKATGATQLFFNHLYDPLSLVRDHRAKEALTA 121
GT L+TKRSTDSV+SLL+VVK+TGA+Q+FFNHLYDPLSLVRDHRAK+ LTA
Sbjct: 69 QLDSSLRSLGTCLITKRSTDSVASLLDVVKSTGASQIFFNHLYDPLSLVRDHRAKDVLTA 128
Query: 122 QGIAVRSFNADLLYEPWDVNDAQGQPFATFAAFWEKCLSMPFDPDAPLLPPKRINSGDMS 181
QGIAVRSFNADLLYEPW+V D G+PF+ FAAFWE+CLSMP+DP++PLLPPK+I SGD+S
Sbjct: 129 QGIAVRSFNADLLYEPWEVTDELGRPFSMFAAFWERCLSMPYDPESPLLPPKKIISGDVS 188
Query: 182 RCPSDTLVFEDESEKGSNALLARAWSPGWSNADKALTTFINGPLIEYSKNRRKADSATTS 241
+C +D LVFED+SEKGSNALLARAWSPGWSN DKALTTFINGPL+EYSKNRRKADSATTS
Sbjct: 189 KCVADPLVFEDDSEKGSNALLARAWSPGWSNGDKALTTFINGPLLEYSKNRRKADSATTS 248
Query: 242 FLSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHP 301
FLSPHLHFGEVSVRKVFHLVRIKQV+WANEGN+AG+ESVNLFLKSIGLREYSRY+SFNHP
Sbjct: 249 FLSPHLHFGEVSVRKVFHLVRIKQVAWANEGNEAGEESVNLFLKSIGLREYSRYISFNHP 308
Query: 302 YSHERPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSF 361
YSHERPLLGHLKFF W VDE YFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSF
Sbjct: 309 YSHERPLLGHLKFFPWAVDENYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSF 368
Query: 362 FVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRIDNPQFEGYKFDP 421
FVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYI+GT+PD R FDRIDNPQFEGYKFDP
Sbjct: 369 FVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYITGTLPDSREFDRIDNPQFEGYKFDP 428
Query: 422 NGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPFPIVRIDAAKCRLDEAL 481
NGEYVRRWLPEL+RLPT+WIHHPWNAPESVLQAAGIELGSNYP PIV +D AK RL EAL
Sbjct: 429 NGEYVRRWLPELSRLPTDWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDEAKARLHEAL 488
Query: 482 SEMWQQEAASRAAIENGTEEGLGDSSD--SAPIAFPPDIQMEEIPEPARNNLPTTARRYE 539
S+MWQ EAASRAAIENG+EEGLGDS++ API FP DI MEE EP R N P RRYE
Sbjct: 489 SQMWQLEAASRAAIENGSEEGLGDSAEVEEAPIEFPRDITMEET-EPTRLN-PN--RRYE 544
Query: 540 DQMVPSMTTXXXX-XXXXXXXXXXXXXXXXXXAEVPRN-ANVNQEPRRDTLNQGVLQTVH 597
DQMVPS+T+ AEVPRN N NQ +R + V
Sbjct: 545 DQMVPSITSSLIRPEEDEESSLNLRNSVGDSRAEVPRNMVNTNQAQQRRA--EPASNQV- 601
Query: 598 XXXXXXXXXXXIVLANXXXXXXXXXXXXXXXXXGGVVPVWSPATSSYSEQLVGDENGIG- 656
IV + GG+VP WSP YSEQ +ENGIG
Sbjct: 602 -TAMIPEFNIRIVAESTEDSTAESSSSGRRERSGGIVPEWSPG---YSEQFPSEENGIGG 657
Query: 657 --TSSSYLQRHPQSHQIMNCRRLSQTG 681
T+SSYLQ H H+I+N RRLSQTG
Sbjct: 658 GSTTSSYLQNH---HEILNWRRLSQTG 681
>TAIR|locus:2018254 [details] [associations]
symbol:CRY2 "cryptochrome 2" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009882 "blue light photoreceptor activity" evidence=ISS]
[GO:0005773 "vacuole" evidence=IDA] [GO:0042802 "identical protein
binding" evidence=IPI] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0009414 "response to water deprivation"
evidence=IGI] [GO:0010118 "stomatal movement" evidence=IGI]
[GO:0009909 "regulation of flower development" evidence=IDA]
[GO:0009911 "positive regulation of flower development"
evidence=IMP] [GO:0006338 "chromatin remodeling" evidence=IMP]
[GO:0010617 "circadian regulation of calcium ion oscillation"
evidence=IMP] [GO:0010075 "regulation of meristem growth"
evidence=IGI] [GO:0006325 "chromatin organization" evidence=IMP]
[GO:0009416 "response to light stimulus" evidence=IEP] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA] [GO:0009637
"response to blue light" evidence=IMP] [GO:0009638 "phototropism"
evidence=IGI] InterPro:IPR002081 InterPro:IPR005101
InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394
PROSITE:PS00691 InterPro:IPR006050 Pfam:PF00875 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005634 GO:GO:0005773
GO:GO:0009414 GO:GO:0006281 GO:GO:0010118 GO:GO:0006338
EMBL:AC000104 GO:GO:0018298 GO:GO:0009911 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0010075 eggNOG:COG0415 GO:GO:0009882
GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645
ProtClustDB:CLSN2681786 GO:GO:0010617 InterPro:IPR014134
TIGRFAMs:TIGR02766 EMBL:U62549 EMBL:U62550 EMBL:X99061 EMBL:U43397
EMBL:AY057440 EMBL:AY057441 EMBL:AY057442 EMBL:EU351967
EMBL:EU351968 EMBL:EU351969 EMBL:EU351970 EMBL:EU351971
EMBL:EU351972 EMBL:EU351973 EMBL:EU351974 EMBL:EU351975
EMBL:EU351976 EMBL:EU351977 EMBL:EU351978 EMBL:EU351979
EMBL:EU351980 EMBL:EU351981 EMBL:EU351982 EMBL:EU351983
EMBL:EU351984 EMBL:EU351985 EMBL:EU351986 EMBL:EU351987
EMBL:EU351988 EMBL:EU351989 EMBL:EU351990 EMBL:EU351991
EMBL:EU351993 EMBL:EU351992 EMBL:EU351994 EMBL:EU351995
EMBL:EU351996 EMBL:EU351997 EMBL:EU351998 EMBL:BT008576
EMBL:BT008648 EMBL:AY576241 EMBL:AY576242 EMBL:AY576243
EMBL:AY576244 EMBL:AY576245 EMBL:AY576246 EMBL:AY576247
EMBL:AY576248 EMBL:AY576249 EMBL:AY576250 EMBL:AY576251
EMBL:AY576252 EMBL:AY576253 EMBL:AY576254 EMBL:AY576255
EMBL:AY576256 EMBL:AY576257 EMBL:AY576258 EMBL:AY576259
EMBL:AY576260 EMBL:AY576261 EMBL:AY576262 EMBL:AY576263
EMBL:AY576264 EMBL:AY576265 EMBL:AY576266 EMBL:AY576267
EMBL:AY576268 EMBL:AY576269 EMBL:AY576270 EMBL:AY576271
EMBL:AK220946 IPI:IPI00528436 PIR:A86176 PIR:S71221
RefSeq:NP_171935.1 RefSeq:NP_849588.1 UniGene:At.21976
ProteinModelPortal:Q96524 SMR:Q96524 DIP:DIP-33589N IntAct:Q96524
MINT:MINT-207946 STRING:Q96524 PaxDb:Q96524 PRIDE:Q96524
EnsemblPlants:AT1G04400.1 EnsemblPlants:AT1G04400.2 GeneID:839529
KEGG:ath:AT1G04400 TAIR:At1g04400 InParanoid:Q96524 KO:K12119
OMA:GDLANNQ PhylomeDB:Q96524 Genevestigator:Q96524
GermOnline:AT1G04400 GO:GO:0009638 Uniprot:Q96524
Length = 612
Score = 1566 (556.3 bits), Expect = 8.4e-161, P = 8.4e-161
Identities = 290/534 (54%), Positives = 371/534 (69%)
Query: 7 SIVWFRRDLRVEDNPXXXXXXXXXXXXXXFIWAPEEEGPYYPGRVSRWWXXXXXXXXXXX 66
+IVWFRRDLR+EDNP FIW PEEEG +YPGR SRWW
Sbjct: 7 TIVWFRRDLRIEDNPALAAAAHEGSVFPVFIWCPEEEGQFYPGRASRWWMKQSLAHLSQS 66
Query: 67 XXXXGTSLVTKRSTDSVSSLLEVVKATGATQLFFNHLYDPLSLVRDHRAKEALTAQGIAV 126
G+ L ++ +++S++L+ ++ TGAT++ FNHLYDP+SLVRDH KE L +GI+V
Sbjct: 67 LKALGSDLTLIKTHNTISAILDCIRVTGATKVVFNHLYDPVSLVRDHTVKEKLVERGISV 126
Query: 127 RSFNADLLYEPWDVNDAQGQPFATFAAFWEKCLSMPFDPDAPLLPPKRIN-----SGDMS 181
+S+N DLLYEPW++ +G+PF +F ++W+KCL M + L PP R+ + +
Sbjct: 127 QSYNGDLLYEPWEIYCEKGKPFTSFNSYWKKCLDMSIE-SVMLPPPWRLMPITAAAEAIW 185
Query: 182 RCPSDTLVFEDESEKGSNALLARAWSPGWSNADKALTTFINGPLIEYSKNRRKADSATTS 241
C + L E+E+EK SNALL RAWSPGWSNADK L FI LI+Y+KN +K +TS
Sbjct: 186 ACSIEELGLENEAEKPSNALLTRAWSPGWSNADKLLNEFIEKQLIDYAKNSKKVVGNSTS 245
Query: 242 FLSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHP 301
LSP+LHFGE+SVR VF R+KQ+ WA + N G+ES +LFL+ IGLREYSRY+ FN P
Sbjct: 246 LLSPYLHFGEISVRHVFQCARMKQIIWARDKNSEGEESADLFLRGIGLREYSRYICFNFP 305
Query: 302 YSHERPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSF 361
++HE+ LL HL+FF W D FKAWRQGRTGYPLVDAGMRELWATGW+H+RIRV+VSSF
Sbjct: 306 FTHEQSLLSHLRFFPWDADVDKFKAWRQGRTGYPLVDAGMRELWATGWMHNRIRVIVSSF 365
Query: 362 FVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRIDNPQFEGYKFDP 421
VK L LPW+WGMKYFWDTLLDADLE D LGWQYISG+IPDG DR+DNP +G K+DP
Sbjct: 366 AVKFLLLPWKWGMKYFWDTLLDADLECDILGWQYISGSIPDGHELDRLDNPALQGAKYDP 425
Query: 422 NGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPFPIVRIDAAKCRLDEAL 481
GEY+R+WLPELARLPTEWIHHPW+AP +VL+A+G+ELG+NY PIV ID A+ L +A+
Sbjct: 426 EGEYIRQWLPELARLPTEWIHHPWDAPLTVLKASGVELGTNYAKPIVDIDTARELLAKAI 485
Query: 482 SEMWQQEAASRAA---IENGTEEGLGDSSDSAPIAFPPDIQM--EEIPEPARNN 530
S + + AA I + E LG ++ P P + +++P R N
Sbjct: 486 SRTREAQIMIGAAPDEIVADSFEALGANTIKEP-GLCPSVSSNDQQVPSAVRYN 538
>TIGR_CMR|CBU_1176 [details] [associations]
symbol:CBU_1176 "deoxyribodipyrimidine photolyase - class
I" species:227377 "Coxiella burnetii RSA 493" [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147
PROSITE:PS00394 PROSITE:PS00691 InterPro:IPR006050 Pfam:PF00875
GO:GO:0006281 EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 SUPFAM:SSF52425
SUPFAM:SSF48173 HOGENOM:HOG000245621 OMA:CKVDFWL KO:K01669
GO:GO:0003904 RefSeq:NP_820171.1 HSSP:P00914
ProteinModelPortal:Q83CE4 GeneID:1209079 KEGG:cbu:CBU_1176
PATRIC:17931093 ProtClustDB:CLSK2394345
BioCyc:CBUR227377:GJ7S-1162-MONOMER Uniprot:Q83CE4
Length = 472
Score = 772 (276.8 bits), Expect = 1.1e-76, P = 1.1e-76
Identities = 164/469 (34%), Positives = 259/469 (55%)
Query: 7 SIVWFRRDLRVEDNPXXXXXXXXXXXXXXFIWAPEEEGPYYPGRVSRWWXXXXXXXXXXX 66
+I WFR+DLR+ DNP ++ +++ G RWW
Sbjct: 3 TIFWFRQDLRLSDNPALVEAAKSADHLIP-LYILDDQLKML-GDAQRWWLHHSLSSLQTA 60
Query: 67 XXXXGTSLVTKRSTDSVSSLLEVVKATGATQLFFNHLYDPLSLVRDHRAKEALTAQGIAV 126
GTSL+ K+ D+ LLE++K ++++N Y+P D + L ++V
Sbjct: 61 LSKKGTSLILKKG-DTKRVLLELIKKYKVEKIYWNRSYEPPYREIDTYLENRLPP--LSV 117
Query: 127 RSFNADLLYEPWDVNDAQGQPFATFAAFWEKCLSMPFDPDAPLLPPKRINSGDMSRCPSD 186
+++ LL EP + + G + F FW K ++ P L PK+ + + SD
Sbjct: 118 EIYHSTLLTEPQKIKNKSGGYYKIFTPFW-KHINASLQPRKTLAAPKKFSQHRAIK--SD 174
Query: 187 TLVFEDESEKGSNALLA-RAWSPGWSNADKALTTFINGPLIEYSKNRRKADSATTSFLSP 245
L + K + W PG NA L FI L Y +R + D ++TS LSP
Sbjct: 175 NLETWNLLPKHPDWSQGFDQWKPGEKNAQIVLKKFIKENLKNYPAHRDRPDISSTSHLSP 234
Query: 246 HLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHPYSHE 305
+LHFGE+S+R+V+ + + N KA D +FL+ + RE++ Y+ ++ P
Sbjct: 235 YLHFGEISIRQVWTAITQATIQDKNL-QKAAD----VFLRQLIWREFAYYLLWHFPQMGR 289
Query: 306 RPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKV 365
F W ++ + +AW++G TGYP+VDAGMRELW TG++H+R+R++V+SF VK
Sbjct: 290 SNFRNQFDNFKWKKNKNWLRAWQKGLTGYPIVDAGMRELWCTGYMHNRVRMIVASFLVKD 349
Query: 366 LQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRIDNPQFEGYKFDPNGEY 425
L + WR G K+FW+TLLDADL ++ALGWQ+I+G PD + RI NP + KFDP+G Y
Sbjct: 350 LMIDWREGEKWFWNTLLDADLANNALGWQWIAGCGPDAAPYFRIFNPILQSKKFDPDGTY 409
Query: 426 VRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPFPIVRIDAAK 474
++RW+PELA++P+++IH+P + P+++ +++ + LG +YPFPIV AK
Sbjct: 410 IKRWIPELAKVPSKYIHYPADMPDNISESSKVNLGVDYPFPIVNHHKAK 458
>TIGR_CMR|BA_3180 [details] [associations]
symbol:BA_3180 "deoxyribodipyrimidine photolyase family
protein" species:198094 "Bacillus anthracis str. Ames" [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 Pfam:PF03441 PRINTS:PR00147 InterPro:IPR006050
Pfam:PF00875 EMBL:AE016879 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GO:GO:0006281 GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 HOGENOM:HOG000245621 KO:K01669 RefSeq:NP_845490.2
RefSeq:YP_029213.1 ProteinModelPortal:Q81NL2 DNASU:1086563
EnsemblBacteria:EBBACT00000013148 EnsemblBacteria:EBBACT00000022838
GeneID:1086563 GeneID:2852147 KEGG:ban:BA_3180 KEGG:bat:BAS2956
PATRIC:18783980 ProtClustDB:CLSK584502
BioCyc:BANT260799:GJAJ-3018-MONOMER Uniprot:Q81NL2
Length = 476
Score = 739 (265.2 bits), Expect = 3.6e-73, P = 3.6e-73
Identities = 154/471 (32%), Positives = 250/471 (53%)
Query: 8 IVWFRRDLRVEDNPXXXXXXXXXXXXXXFIWAPEEEGPYYPGRVSRWWXXXXXXXXXXXX 67
IV F++D R+ DNP ++ +E + G S+WW
Sbjct: 6 IVMFQKDFRLYDNPALFEAAQSGEVVPVYV---HDE-TFSMGSASKWWLHHAIIDVKKQL 61
Query: 68 XXXGTSLVTKRSTDSVSSLLEVVKATGATQLFFNHLYDPLSLVRDHRAKEALTAQGIAVR 127
G++L+ ++ + +L +V+ G T +++N YDP L + + K L +G+ +
Sbjct: 62 EALGSTLIIRKGSTQ-EEILSLVEQLGITAVYWNICYDPDRLQSNQKMKMMLEHKGMICK 120
Query: 128 SFNADLLYEPWDVNDAQGQPFATFAAFWEKCLSMPFD-PDAPLLPPKRINSGDMSRCPSD 186
FN+ LL EPW + + F F+ P + + K NS +S S+
Sbjct: 121 EFNSHLLLEPWVIKKKDNTEYKVFTPFYNAFQKQVIHKPISKVQSIKGGNSLPVSLSVSE 180
Query: 187 TLVFEDESEKGSNALLARAWSPGWSNADKALTTFINGPLIEYSKNRRKADSATTSFLSPH 246
+ + W P A K F + L YS+ R + S L+P+
Sbjct: 181 LHLLPTIPWTSH---MESIWEPTEEGAYKTWKEFFSSKLASYSEGRDFPNQNAHSMLAPY 237
Query: 247 LHFGEVSVRKVFHLVRIKQVSWANEGN-KAGDESVNLFLKSIGLREYSRYMSFNHPYSHE 305
L FG++SV+ ++H + ++ + E ++ VN F++ + RE+S Y+ +++P++
Sbjct: 238 LSFGQISVKLIYHYL----INKSTESQCSLFEKQVNSFIRQLIWREFSYYLLYHYPFTAY 293
Query: 306 RPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKV 365
+PL + F W +E + W++G TGYP +DAGMRELW TG++H+R R+ V+SF VK
Sbjct: 294 KPLNKSFEHFPWNNEEELLRVWQKGDTGYPFIDAGMRELWQTGFMHNRTRMAVASFLVKH 353
Query: 366 LQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRIDNPQFEGYKFDPNGEY 425
L +PW+ G K+F DTLLDAD+ ++ +GWQ+++G+ D + RI NP +G KFD NGEY
Sbjct: 354 LLIPWQEGAKWFMDTLLDADIANNTMGWQWVAGSGADASPYFRIFNPITQGEKFDKNGEY 413
Query: 426 VRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPFPIVRIDAAKCR 476
+R+W+PEL +P ++IH PW APE +LQ A I+LG YP P+V AA+ R
Sbjct: 414 IRKWVPELKDMPNKYIHKPWEAPEHILQKANIQLGHTYPLPVVDHKAARER 464
>UNIPROTKB|Q9KNA8 [details] [associations]
symbol:phrA "Deoxyribodipyrimidine photo-lyase"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0003904 "deoxyribodipyrimidine photo-lyase activity"
evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS]
InterPro:IPR002081 InterPro:IPR005101 InterPro:IPR018394
Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394 PROSITE:PS00691
InterPro:IPR006050 Pfam:PF00875 GO:GO:0003677 GO:GO:0006281
EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 OMA:CKVDFWL
KO:K01669 GO:GO:0003904 PIR:G82505 RefSeq:NP_232458.1
ProteinModelPortal:Q9KNA8 DNASU:2612142 GeneID:2612142
KEGG:vch:VCA0057 PATRIC:20084701 ProtClustDB:CLSK869480
Uniprot:Q9KNA8
Length = 469
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 137/457 (29%), Positives = 215/457 (47%)
Query: 8 IVWFRRDLRVEDNPXXXXXXXXXX-XXXXFIWAPEEEGPYYPGRVSRWWXXXXXXXXXXX 66
+VWFRRDLR DN +I PE+ ++ +
Sbjct: 3 LVWFRRDLRSFDNTALTAALNSGDPVAAMYIATPEQWHQHHLAPIQADLIWRRLAELQQE 62
Query: 67 XXXXGTSLVTKRSTD---SVSSLLEVVKATGATQLFFNHLYDPLSLVRDHRAKEALTAQG 123
L ++ D + ++ ++ K ATQ+ N Y+ RD A++ L+ QG
Sbjct: 63 LAALNVPLFYQQVADFQAAAVAVSQLAKTLNATQVLANRDYELDEQQRDQLAQQLLSEQG 122
Query: 124 IAVRSFNADLLYEPWDVNDAQGQPFATFAAFWEKCLSMPFDPDAPLLPPKRINSGDMSRC 183
I +F+ + P V QG+ F F F L++ F P P++ R + +
Sbjct: 123 IIWSAFDDKCVLPPGSVRTKQGEFFKVFTPFKRAWLTL-FQP--PVIGKNRPVA--LWNV 177
Query: 184 PSDT--LVFEDESEKGSNALLARAWSPGWSNADKALTTFINGPLIEYSKNRRKADSATTS 241
PS LV+ E + + W+ + L F + +Y + R TS
Sbjct: 178 PSALAELVWHPEQAFDYPRIDSTPWAADFETVRAQLRDFCRERVQDYHQARDFPAREGTS 237
Query: 242 FLSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHP 301
LSP+L G +S R+ + R+ S E + E ++L + RE+ +++ P
Sbjct: 238 SLSPYLAIGVLSARQC--VARLYHESSMGELS----EGAQVWLSELIWREFYQHLVAIEP 291
Query: 302 -YSHERPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS 360
S R + W D F+ W +G+TGYP+VDA MR+L TGW+H+R+R++V+S
Sbjct: 292 NLSKSRDFVEWGARLEWWNDNEKFQLWCEGKTGYPIVDAAMRQLNQTGWMHNRLRMIVAS 351
Query: 361 FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRIDNPQFEGYKFD 420
F K L + WRWG +YF L+D D ++ GWQ+ + T DG+ + RI NP +G KFD
Sbjct: 352 FLTKDLHIDWRWGERYFMSRLIDGDYAANNGGWQWCASTGCDGQPYFRIFNPVSQGEKFD 411
Query: 421 PNGEYVRRWLPELARLPTEWIHHPWNAP--ESVLQAA 455
PNG+++RRW+PEL + + +IH PW P SVL A
Sbjct: 412 PNGDFIRRWVPELRSVSSAYIHQPWTYPAVNSVLYPA 448
>TIGR_CMR|VC_A0057 [details] [associations]
symbol:VC_A0057 "deoxyribodipyrimidine photolyase,
cyclobutane pyrimidine dimer-specific" species:686 "Vibrio cholerae
O1 biovar El Tor" [GO:0003904 "deoxyribodipyrimidine photo-lyase
activity" evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS]
InterPro:IPR002081 InterPro:IPR005101 InterPro:IPR018394
Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394 PROSITE:PS00691
InterPro:IPR006050 Pfam:PF00875 GO:GO:0003677 GO:GO:0006281
EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 OMA:CKVDFWL
KO:K01669 GO:GO:0003904 PIR:G82505 RefSeq:NP_232458.1
ProteinModelPortal:Q9KNA8 DNASU:2612142 GeneID:2612142
KEGG:vch:VCA0057 PATRIC:20084701 ProtClustDB:CLSK869480
Uniprot:Q9KNA8
Length = 469
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 137/457 (29%), Positives = 215/457 (47%)
Query: 8 IVWFRRDLRVEDNPXXXXXXXXXX-XXXXFIWAPEEEGPYYPGRVSRWWXXXXXXXXXXX 66
+VWFRRDLR DN +I PE+ ++ +
Sbjct: 3 LVWFRRDLRSFDNTALTAALNSGDPVAAMYIATPEQWHQHHLAPIQADLIWRRLAELQQE 62
Query: 67 XXXXGTSLVTKRSTD---SVSSLLEVVKATGATQLFFNHLYDPLSLVRDHRAKEALTAQG 123
L ++ D + ++ ++ K ATQ+ N Y+ RD A++ L+ QG
Sbjct: 63 LAALNVPLFYQQVADFQAAAVAVSQLAKTLNATQVLANRDYELDEQQRDQLAQQLLSEQG 122
Query: 124 IAVRSFNADLLYEPWDVNDAQGQPFATFAAFWEKCLSMPFDPDAPLLPPKRINSGDMSRC 183
I +F+ + P V QG+ F F F L++ F P P++ R + +
Sbjct: 123 IIWSAFDDKCVLPPGSVRTKQGEFFKVFTPFKRAWLTL-FQP--PVIGKNRPVA--LWNV 177
Query: 184 PSDT--LVFEDESEKGSNALLARAWSPGWSNADKALTTFINGPLIEYSKNRRKADSATTS 241
PS LV+ E + + W+ + L F + +Y + R TS
Sbjct: 178 PSALAELVWHPEQAFDYPRIDSTPWAADFETVRAQLRDFCRERVQDYHQARDFPAREGTS 237
Query: 242 FLSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHP 301
LSP+L G +S R+ + R+ S E + E ++L + RE+ +++ P
Sbjct: 238 SLSPYLAIGVLSARQC--VARLYHESSMGELS----EGAQVWLSELIWREFYQHLVAIEP 291
Query: 302 -YSHERPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS 360
S R + W D F+ W +G+TGYP+VDA MR+L TGW+H+R+R++V+S
Sbjct: 292 NLSKSRDFVEWGARLEWWNDNEKFQLWCEGKTGYPIVDAAMRQLNQTGWMHNRLRMIVAS 351
Query: 361 FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRIDNPQFEGYKFD 420
F K L + WRWG +YF L+D D ++ GWQ+ + T DG+ + RI NP +G KFD
Sbjct: 352 FLTKDLHIDWRWGERYFMSRLIDGDYAANNGGWQWCASTGCDGQPYFRIFNPVSQGEKFD 411
Query: 421 PNGEYVRRWLPELARLPTEWIHHPWNAP--ESVLQAA 455
PNG+++RRW+PEL + + +IH PW P SVL A
Sbjct: 412 PNGDFIRRWVPELRSVSSAYIHQPWTYPAVNSVLYPA 448
>TIGR_CMR|SPO_1917 [details] [associations]
symbol:SPO_1917 "deoxyribodipyrimidine photolyase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147
PROSITE:PS00394 InterPro:IPR006050 Pfam:PF00875 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0006281 GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 SUPFAM:SSF52425
SUPFAM:SSF48173 HOGENOM:HOG000245621 OMA:CKVDFWL KO:K01669
GO:GO:0003904 RefSeq:YP_167152.1 ProteinModelPortal:Q5LS53
GeneID:3192692 KEGG:sil:SPO1917 PATRIC:23377163
ProtClustDB:CLSK933677 Uniprot:Q5LS53
Length = 481
Score = 506 (183.2 bits), Expect = 1.8e-48, P = 1.8e-48
Identities = 144/500 (28%), Positives = 230/500 (46%)
Query: 1 MSGRGCSIVWFRRDLRVEDNPXXXXXXXXXXXXX-XFIWAPEEEGPYYPGRVSRWWXXXX 59
MS I W RRDLR+ D+P FI +E G +
Sbjct: 1 MSETRAIIYWLRRDLRLADHPGLAAAAASGRPVVPVFI---HDESVAALGAAPAFRLGLG 57
Query: 60 XXXXXXXXXXXGTSLVTKRSTDSVSSLLEVVKATGATQLFFNHLYDPLSLVRDHRAKEAL 119
G+ L+ +R + + + L ++ TGA +++ Y P ++ RD K AL
Sbjct: 58 LERFGATLGDMGSRLILRRGS-APAVLQALIAETGAGAVWWTREYTPQAITRDSALKTAL 116
Query: 120 TAQGIAVRSFNADLLYEPWDVNDAQGQPFATFAAFWEKCLSMPFDPDAPLLPPKRINSGD 179
GI RSF LL+EPW V G + + FW + +S + AP P R+ +
Sbjct: 117 QQAGIEARSFGGALLFEPWTVETGAGGFYKVYTPFW-RAVSQR-EVSAPDPAPARVRPPE 174
Query: 180 M---SRCPSDTLVFEDESEKGSNALLARAWSPGWSNADKALTTFINGPLIEYSKNRRKAD 236
S SD + +G+ A++A +PG + A + L FI + +Y R
Sbjct: 175 AWPGSEALSDWGLGAP-MRRGA-AVVATHQAPGEAAALERLDRFIATGIGQYDACRDLPA 232
Query: 237 SATTSFLSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLREYSRYM 296
TS LS L GE+ R ++H A E G + FLK + R+++ ++
Sbjct: 233 GDGTSTLSDALSLGEIGPRTLWHR--------AGEAAHKGAQGAETFLKQLVWRDFAYHL 284
Query: 297 SFNHPYSHERPLLGHLKFFSWVVD--EGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRI 354
++ P+ + F W D + F AW +GRTG PLVDA MRE++ TG +H+R
Sbjct: 285 MYHTPHLLSENWRPGWEVFPWATDPADPGFVAWTRGRTGVPLVDAAMREMYVTGRMHNRA 344
Query: 355 RVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRIDNPQF 414
R++ +S+ K L + W+ GM +F D L D D ++A+GWQ+++G PD + RI NP+
Sbjct: 345 RMIAASYLTKHLMVHWKLGMDWFADCLTDWDPAANAMGWQWVAGCGPDAAPYFRIFNPET 404
Query: 415 EGYKFDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPFPIVRIDAAK 474
+ KFDP G Y W+ E P ++A V ++ + ++YP PI+ +D +
Sbjct: 405 QAKKFDPKGRYRNHWIAEGQAEPPRAALSYFDA---VPRSWNLRPDASYPPPIMALDQGR 461
Query: 475 CRLDEALSEMWQQEAASRAA 494
R A + + Q + + A
Sbjct: 462 RRALSAYASAFSQGSDGKLA 481
>UNIPROTKB|P00914 [details] [associations]
symbol:phr "deoxyribodipyrimidine photolyase
(photoreactivation)" species:83333 "Escherichia coli K-12"
[GO:0018298 "protein-chromophore linkage" evidence=IEA;IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003904 "deoxyribodipyrimidine
photo-lyase activity" evidence=IEA;IDA] [GO:0006281 "DNA repair"
evidence=IEA] InterPro:IPR002081 InterPro:IPR005101
InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394
PROSITE:PS00691 EMBL:K01299 InterPro:IPR006050 Pfam:PF00875
GO:GO:0000166 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0003677 GO:GO:0006281 GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645
HOGENOM:HOG000245621 OMA:CKVDFWL KO:K01669 GO:GO:0003904
EMBL:X57399 PIR:A01137 RefSeq:NP_415236.1 RefSeq:YP_488988.1
PDB:1DNP PDBsum:1DNP ProteinModelPortal:P00914 SMR:P00914
DIP:DIP-10505N IntAct:P00914 MINT:MINT-1302006 PRIDE:P00914
EnsemblBacteria:EBESCT00000003526 EnsemblBacteria:EBESCT00000003527
EnsemblBacteria:EBESCT00000016976 GeneID:12930926 GeneID:947005
KEGG:ecj:Y75_p0688 KEGG:eco:b0708 PATRIC:32116611 EchoBASE:EB0729
EcoGene:EG10736 ProtClustDB:PRK10674 BioCyc:EcoCyc:EG10736-MONOMER
BioCyc:ECOL316407:JW0698-MONOMER BioCyc:MetaCyc:EG10736-MONOMER
SABIO-RK:P00914 EvolutionaryTrace:P00914 Genevestigator:P00914
Uniprot:P00914
Length = 472
Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
Identities = 147/478 (30%), Positives = 221/478 (46%)
Query: 8 IVWFRRDLRVEDNPXXXXX--XXXXXXXXXFIWAPEEEGPYYPGRVSRWWXXXXXXXXXX 65
+VWFR+DLR+ DN +I P + +
Sbjct: 5 LVWFRQDLRLHDNLALAAACRNSSARVLALYIATPRQWATHNMSPRQAELINAQLNGLQI 64
Query: 66 XXXXXGTSLVTKRSTDSVSSLLEVVKATGA----TQLFFNHLYDPLSLVRDHRAKEALTA 121
G L+ + D V+S+ E+VK A T LF+N+ Y+ RD + AL
Sbjct: 65 ALAEKGIPLLFREVDDFVASV-EIVKQVCAENSVTHLFYNYQYEVNERARDVEVERAL-- 121
Query: 122 QGIAVRSFNADLLYEPWDVNDAQGQPFATFAAF---WEKCLSMPFDPDAPLLPPKRINSG 178
+ + F+ ++ P V + + F F W K L P+ P R +SG
Sbjct: 122 RNVVCEGFDDSVILPPGAVMTGNHEMYKVFTPFKNAWLKRLREGM-PECVAAPKVR-SSG 179
Query: 179 DMSRCPSDTLVFEDESEKGSNALLARAWSPGWSNADKA-LTTFINGPLIEYSKNRRKADS 237
+ PS TL + +S A P A A L F EY + R
Sbjct: 180 SIEPSPSITLNYPRQS-------FDTAHFPVEEKAAIAQLRQFCQNGAGEYEQQRDFPAV 232
Query: 238 ATTSFLSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMS 297
TS LS L G +S R+ H + +Q A +G AG +++L + RE+ R++
Sbjct: 233 EGTSRLSASLATGGLSPRQCLHRLLAEQPQ-ALDGG-AG----SVWLNELIWREFYRHLI 286
Query: 298 FNHP-YSHERPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRV 356
HP RP + W + + +AW++G+TGYP+VDA MR+L +TGW+H+R+R+
Sbjct: 287 TYHPSLCKHRPFIAWTDRVQWQSNPAHLQAWQEGKTGYPIVDAAMRQLNSTGWMHNRLRM 346
Query: 357 VVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRIDNPQFEG 416
+ +SF VK L + WR G +YF L+D DL ++ GWQ+ + T D + RI NP +G
Sbjct: 347 ITASFLVKDLLIDWREGERYFMSQLIDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQG 406
Query: 417 YKFDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPFPIVRIDAAK 474
KFD GE++R+WLPEL +P + +H PW Q AG+ L +YP PIV A+
Sbjct: 407 EKFDHEGEFIRQWLPELRDVPGKVVHEPWKWA----QKAGVTL--DYPQPIVEHKEAR 458
>UNIPROTKB|Q48MU1 [details] [associations]
symbol:phrB "Deoxyribodipyrimidine photolyase"
species:264730 "Pseudomonas syringae pv. phaseolicola 1448A"
[GO:0003904 "deoxyribodipyrimidine photo-lyase activity"
evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS]
InterPro:IPR002081 InterPro:IPR005101 InterPro:IPR018394
Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394 InterPro:IPR006050
Pfam:PF00875 GO:GO:0006281 GO:GO:0018298 EMBL:CP000058
GenomeReviews:CP000058_GR Gene3D:3.40.50.620 InterPro:IPR014729
eggNOG:COG0415 SUPFAM:SSF52425 SUPFAM:SSF48173 HOGENOM:HOG000245621
OMA:CKVDFWL KO:K01669 GO:GO:0003904 RefSeq:YP_273281.1
ProteinModelPortal:Q48MU1 STRING:Q48MU1 GeneID:3555718
KEGG:psp:PSPPH_1010 PATRIC:19971112 ProtClustDB:CLSK868818
Uniprot:Q48MU1
Length = 482
Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
Identities = 137/499 (27%), Positives = 219/499 (43%)
Query: 8 IVWFRRDLRVEDNPXXXXXXXXXXXXXXFIWAPEEEGPYYPGRVS-RWWXXXXXXXXXXX 66
++W R DLRV DN ++ +P + + +W
Sbjct: 3 LIWLRSDLRVHDNTALTAAMERGPTLAVYLLSPAQWRSHDDADCKVDFWLRNLVELEKAL 62
Query: 67 XXXXGTSLVTKRST-----DSVSSLLEVVKATGATQLFFNHLYDPLSLVRDHRAKEALTA 121
L+ + T + +S+L +K G L N Y RD ++AL
Sbjct: 63 GALNVPLLIREADTWDQAPEVLSTLCTQLKIEG---LHLNQEYGINETRRDQAVQKALEK 119
Query: 122 QGIAVRSFNADLLYEPWDVNDAQGQPFATFAAFWEKCLS-MPFDPDAPLLPPKRINSGDM 180
G+ V S+ LL++P + G F F F + C + M P+ PK S +
Sbjct: 120 AGVQVTSYLDQLLFKPGSILTKTGNYFQVFTQFKKVCYNRMHQAMPQPVRTPKAQQSLSI 179
Query: 181 SRCPSDTLVFEDESEKGSNALLARAWSPGWSNADKALTTFINGPLIEYSKNRRKADSATT 240
SD++ + E + L W G + A + + TF + + Y R T
Sbjct: 180 K---SDSIPDQVEGFATPSKALRDLWPAGEAEARRRMATFADAQISYYKTERDFPAKPGT 236
Query: 241 SFLSPHLHFGEVSVRKVFHLVRIKQVSWANEGN-KAGDESVNLFLKSIGLREYSRYMSFN 299
S LS +L G +S R+ H +N+G + GD ++ + RE+ ++
Sbjct: 237 SQLSAYLAAGVISPRQCLHAAL-----GSNQGEFETGDVGTVTWINELLWREFYKHTLVG 291
Query: 300 HP-YSHERPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVV 358
+P S R + W AW++ RTG P++DA MR+L TGW+H+R+R+VV
Sbjct: 292 YPRVSRHRAFRPETEALKWRDAPEELLAWQEARTGLPIIDAAMRQLLETGWMHNRLRMVV 351
Query: 359 SSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRIDNPQFEGYK 418
+ F K L + W G ++F L+D DL S+ GWQ+ S T D + RI NP + +
Sbjct: 352 AMFLTKNLLIDWHEGERFFMRHLIDGDLASNNGGWQWSSSTGTDSAPYFRIFNPLSQSER 411
Query: 419 FDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPFPIVRIDAAKCRLD 478
FDP G +++RWLPELA L + IH P S+ G+ ++YP PIV + ++ R
Sbjct: 412 FDPEGVFIKRWLPELADLNKKQIHDP----ASI---GGLFGAADYPKPIVDLSKSRARAL 464
Query: 479 EALSEMWQQEAASRAAIEN 497
A + ++ A A IE+
Sbjct: 465 AAFKALPARQPA--AGIEH 481
>TIGR_CMR|SO_3384 [details] [associations]
symbol:SO_3384 "deoxyribodipyrimidine photolyase"
species:211586 "Shewanella oneidensis MR-1" [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147
PROSITE:PS00394 PROSITE:PS00691 InterPro:IPR006050 Pfam:PF00875
GO:GO:0006281 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 SUPFAM:SSF52425
SUPFAM:SSF48173 HOGENOM:HOG000245621 KO:K01669 GO:GO:0003904
HSSP:P00914 RefSeq:NP_718938.1 ProteinModelPortal:Q8EBW1
GeneID:1171062 KEGG:son:SO_3384 PATRIC:23526448 OMA:WISELAW
ProtClustDB:CLSK907140 Uniprot:Q8EBW1
Length = 512
Score = 408 (148.7 bits), Expect = 7.5e-42, Sum P(2) = 7.5e-42
Identities = 116/389 (29%), Positives = 185/389 (47%)
Query: 110 VRDHRAKEALTAQGIAVRSFNADLLYEPWDVNDAQGQPFATFAAF---WEKCLS----MP 162
+ + + +A GI + + L P V + G + F F W + + +P
Sbjct: 120 INEQKRDQACVEAGIPLSLSDEHCLLPPGTVLNLSGDMYRVFTPFSRKWREVAAKQAILP 179
Query: 163 FDPDAPL----LPPKRI---NSGDMSRCPSDTLVFEDE--SEKGSNALLA-RAWSPGWSN 212
APL PK + N G S + + ++ N L++ W+ G
Sbjct: 180 LGVPAPLGSILSEPKPLFFKNIGSTYLAASKDIASSKKGFNQTAPNPLISSEQWAAGEGQ 239
Query: 213 ADKALTTFINGPLIEYSKNRRKADSATTSFLSPHLHFGEVSVRKVFH--LVRIKQVSWAN 270
A + L FI + +Y ++R TS +SP+L G +S R+ L R +V
Sbjct: 240 AKRLLNQFIQQKVQDYKQDRDFPAIDGTSVISPYLAIGVLSPRQCVAALLQRFPEV--IV 297
Query: 271 EGNKAGDESVNLFLKSIGLREYSRYMSFNHP-YSHERPLLGHLKFFSWVVDEGYFKAWRQ 329
+ G +L + RE+ R++ P S W ++ F AW +
Sbjct: 298 DDTSPG----RTWLNELIWREFYRHLLVAFPDLSKGNNFNRQADHVLWRNNQSEFLAWCE 353
Query: 330 GRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESD 389
G+TGYP+VDA MR+L TGW+H+R+R+VV+SF K L + WRWG +YF L+D DL ++
Sbjct: 354 GKTGYPIVDAAMRQLNQTGWMHNRLRMVVASFLTKHLLIDWRWGERYFRQHLIDGDLAAN 413
Query: 390 ALGWQYISGTIPDGRAFDRIDNPQFEGYKFDPNGEYVRRWLPELARLPTEWIHHPWNAPE 449
GWQ+ +G D + + RI NP + KFDP+G ++R++LPELA +H P N +
Sbjct: 414 NGGWQWSAGCGCDAQPYFRIFNPMSQSEKFDPDGRFIRKYLPELASWGVTRLHQP-NQQK 472
Query: 450 --SVLQAAGIELGSNYPFPIVRIDAAKCR 476
S+ +A ++YP IV +AA+ R
Sbjct: 473 MPSLFEAPLFASQADYPNAIVEHNAARAR 501
Score = 55 (24.4 bits), Expect = 7.5e-42, Sum P(2) = 7.5e-42
Identities = 10/19 (52%), Positives = 16/19 (84%)
Query: 2 SGRGCSIVWFRRDLRVEDN 20
SG+ +++WFR+DLR+ DN
Sbjct: 8 SGKH-ALMWFRQDLRLTDN 25
>ASPGD|ASPL0000053661 [details] [associations]
symbol:cryA species:162425 "Emericella nidulans"
[GO:0003904 "deoxyribodipyrimidine photo-lyase activity"
evidence=IGI] [GO:0005634 "nucleus" evidence=IDA] [GO:0000719
"photoreactive repair" evidence=IGI] [GO:0070797 "negative
regulation of cleistothecium development" evidence=IMP] [GO:0071483
"cellular response to blue light" evidence=IMP] [GO:0071492
"cellular response to UV-A" evidence=IMP] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0003729
"mRNA binding" evidence=IEA] [GO:0070791 "cleistothecium
development" evidence=IMP] InterPro:IPR002081 InterPro:IPR005101
InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394
PROSITE:PS00691 InterPro:IPR006050 Pfam:PF00875 EMBL:BN001308
GO:GO:0006281 EMBL:AACD01000007 Gene3D:3.40.50.620
InterPro:IPR014729 eggNOG:COG0415 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 HOGENOM:HOG000245621 KO:K01669 OrthoDB:EOG4XPTQ3
RefSeq:XP_657991.1 ProteinModelPortal:Q5BGE3 STRING:Q5BGE3
EnsemblFungi:CADANIAT00002312 GeneID:2876167 KEGG:ani:AN0387.2
OMA:HMAPRQA Uniprot:Q5BGE3
Length = 567
Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
Identities = 133/498 (26%), Positives = 214/498 (42%)
Query: 1 MSGRGCSIVWFRRDLRVEDNPXXXXXXXXXXXXXX-----FIWAPEEEGPYY--PGRVSR 53
M+ + WF+ DLR+ DN +I +PE+ + P RV
Sbjct: 71 MTANAAVVHWFKSDLRLHDNRALQMAYRVAREHKIPLIGLYILSPEDLTAHLSSPARVDL 130
Query: 54 WWXXXXXXXXXXXXXXXGTSLVTKRSTDSVSS-LLEVVKATGATQLFFNHLYDPLSLVRD 112
+ T+ + ++ + + GA LF N Y+ L R+
Sbjct: 131 TLRTLEQLKRDLGELDVPLYMETQACRKDIPRRIINLCQEWGANHLFANLEYEVDELRRE 190
Query: 113 HRAKEALTAQGIAVRSFNADLLYEPWDVNDAQGQPFATFAAFWEKCLS-MPFDPD-APLL 170
+ GI + + + P ++ QG+ +A ++ ++ L+ + +P+ +
Sbjct: 191 AKLIRLCAENGIRFETAHDMCVVPPGVLSSQQGRQYAVYSPWFRSWLAFLNENPEYLEVS 250
Query: 171 PPKRINSGDMSR-------CPSDTLVFE---DESEKGSNALLARAWSPGWSNADKALTTF 220
N GD R CP D+ EK + RA+ G + L F
Sbjct: 251 EDPTSNPGDARRYFKELFECPVPATPENKRFDDVEKADR--VRRAFPAGEHEGLRRLEEF 308
Query: 221 INGPLIEYSKNRRKADSATTSFLSPHLHFGEVSVRKVFHLVRIKQVSWANEGN-KAGDES 279
+ Y R TTS LSP+ G +S R + + AN G G+
Sbjct: 309 LE-KATAYDDERNFLSGETTSKLSPYFASGSLSARTA-----VAKAREANAGKISRGEAG 362
Query: 280 VNLFLKSIGLREYSRYMSFNHPY-SHERPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVD 338
++ + R++ +++ + P+ + W + +F+AW G+TGYPLVD
Sbjct: 363 YISWISEVAWRDFYKHVLVHWPFICMNKCFKFEFTNIDWSYNNTHFEAWAAGKTGYPLVD 422
Query: 339 AGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISG 398
A MR+L AT W+H+R R+VVSSF K L + WR G +YF + L+D D S+ GW + S
Sbjct: 423 AAMRQLHATAWMHNRCRMVVSSFLCKDLLIDWRRGERYFMEHLIDGDFASNHGGWGFGSS 482
Query: 399 TIPDGRAFDRIDNPQFEGYKFDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIE 458
T D + + RI NP + +FDP+GE++RRW+PEL + IH P+ A I
Sbjct: 483 TGVDPQPYFRIFNPIRQSERFDPDGEFIRRWVPELRGVEGNAIHAPYERG-----AGDIA 537
Query: 459 LGSNYPFPIVRIDAAKCR 476
+ YP PIV D A+ R
Sbjct: 538 RANGYPEPIV--DHARQR 553
>TIGR_CMR|CPS_1380 [details] [associations]
symbol:CPS_1380 "deoxyribodipyrimidine photolyase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147
PROSITE:PS00394 PROSITE:PS00691 InterPro:IPR006050 Pfam:PF00875
GO:GO:0006281 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
SUPFAM:SSF52425 SUPFAM:SSF48173 HOGENOM:HOG000245621 OMA:GDLANNQ
KO:K01669 GO:GO:0003904 RefSeq:YP_268123.1
ProteinModelPortal:Q485Z2 STRING:Q485Z2 GeneID:3520518
KEGG:cps:CPS_1380 PATRIC:21465975 ProtClustDB:CLSK715243
BioCyc:CPSY167879:GI48-1461-MONOMER Uniprot:Q485Z2
Length = 470
Score = 387 (141.3 bits), Expect = 5.0e-39, Sum P(2) = 5.0e-39
Identities = 109/340 (32%), Positives = 158/340 (46%)
Query: 111 RDHRAKEALTAQGIAVRSFNADLLYEPWDVNDAQGQPFATFAAFWEKCLSMPFDPDAPLL 170
RD L A GI + AD++ V + G + F F L+ L
Sbjct: 117 RDKALYLELKASGIPLTLLEADVIVPKGKVLNQSGIMYKVFTPFKRAWLTYIQQGGFEYL 176
Query: 171 PPKRINSGDMSRCPSDTLVFEDESEKGSNALLARAWSPGWSNADKALTTFINGPLIEYSK 230
+ S +++ + E ++GS ++ W + L F + Y
Sbjct: 177 GKVSVKSSAVNKADNQ------EEDQGS---ISSTWPLATVFEQQILPKFYQQKISTYKL 227
Query: 231 NRRKADSATTSFLSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLR 290
NR TS +SP+L G +S R V L+ K A D +L I R
Sbjct: 228 NRDIPSIKGTSGISPYLAAGVISPRFVLRLLLNKHPDLL----VASDSEEFSWLNEIIWR 283
Query: 291 EYSRYMSFNHPYSHERPLLGHLKF------FSWVVDEGYFKAWRQGRTGYPLVDAGMREL 344
E+ R++ F HE+ L H + W D F AW QGRTGYPLVDA MR+L
Sbjct: 284 EFYRHLLF-----HEQRLCKHQCYKENYQEMLWHNDAALFDAWCQGRTGYPLVDAAMRQL 338
Query: 345 WATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGR 404
TGW+H+R+R+VV+SF K L + WR G KYF L+D DL S+ GWQ+ + T D +
Sbjct: 339 NQTGWMHNRLRMVVASFLTKHLLIDWRLGEKYFMQHLIDGDLASNNGGWQWAASTGCDAQ 398
Query: 405 AFDRIDNPQFEGYKFDPNGEYVRRWLPELARLPTEWIHHP 444
+ RI NP + +FDP G ++R+++PEL + + IH P
Sbjct: 399 PYFRIFNPIRQSERFDPKGVFIRKYIPELNNISDKAIHFP 438
Score = 53 (23.7 bits), Expect = 5.0e-39, Sum P(2) = 5.0e-39
Identities = 8/14 (57%), Positives = 10/14 (71%)
Query: 8 IVWFRRDLRVEDNP 21
++W R DLR DNP
Sbjct: 2 LLWLRNDLRTHDNP 15
>ZFIN|ZDB-GENE-120215-243 [details] [associations]
symbol:si:ch73-25i22.2 "si:ch73-25i22.2"
species:7955 "Danio rerio" [GO:0003913 "DNA photolyase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
InterPro:IPR002081 InterPro:IPR005101 InterPro:IPR018394
Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394
ZFIN:ZDB-GENE-120215-243 GO:GO:0006281 GO:GO:0003913
SUPFAM:SSF48173 GeneTree:ENSGT00500000044813 EMBL:CU929153
Ensembl:ENSDART00000151373 Uniprot:I3ITK7
Length = 316
Score = 386 (140.9 bits), Expect = 2.2e-35, P = 2.2e-35
Identities = 86/224 (38%), Positives = 124/224 (55%)
Query: 317 WVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKY 376
W D + KAW++GRTGYPLVDA MR+LW TGW+++ +R VV+SF + L PW+ G ++
Sbjct: 4 WSSDHAHLKAWQRGRTGYPLVDAAMRQLWQTGWMNNYMRHVVASFLIAYLHFPWQEGYRW 63
Query: 377 FWDTLLDADLESDALGWQYISGTIPDGRAFDRIDNPQFEGYKFDPNGEYVRRWLPELARL 436
F DTL+DAD+ DA+ WQ +G + ++ + +P DP G +VR+W PEL L
Sbjct: 64 FQDTLVDADVAIDAMMWQ--NGGMCGLDHWNFVMHPIDAALTCDPCGTFVRQWCPELKAL 121
Query: 437 PTEWIHHPWNAPESVLQAAGIELGSNYPFPIVRIDAAKCRLDEALSEMWQQEAASRAAIE 496
P + IH PW P S+L+ AG+ G +YP IV ID L+E ++ Q A+ R
Sbjct: 122 PDDLIHKPWKCPTSMLRRAGVVFGDSYPERIV-ID-----LEERRAQSLQDVASVRRRFR 175
Query: 497 NGTEEGLGDSSDSAPIAFPPDI--QMEEIPEPARNN--LPTTAR 536
++ G P D ME+I + +N LP R
Sbjct: 176 QFVDQRSGCDLVPVPSRLVQDALGSMEDIVKHEKNGFLLPVITR 219
>UNIPROTKB|F1N0J9 [details] [associations]
symbol:Bt.20450 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000118 "regulation of sodium-dependent phosphate
transport" evidence=IEA] [GO:0042752 "regulation of circadian
rhythm" evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IEA]
[GO:0006606 "protein import into nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=IEA] [GO:0003684 "damaged
DNA binding" evidence=IEA] [GO:0000988 "protein binding
transcription factor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0003913
"DNA photolyase activity" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875 GO:GO:0005739
GO:GO:0005634 GO:GO:0003684 GO:GO:0007623 GO:GO:0006281
GO:GO:0042752 GO:GO:0000122 GO:GO:0006606 GO:GO:0003697
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 GeneTree:ENSGT00500000044813 GO:GO:0000988
EMBL:DAAA02041566 EMBL:DAAA02041564 EMBL:DAAA02041565
IPI:IPI00698451 Ensembl:ENSBTAT00000028277 OMA:DIQENHD
Uniprot:F1N0J9
Length = 610
Score = 387 (141.3 bits), Expect = 1.4e-33, P = 1.4e-33
Identities = 149/541 (27%), Positives = 240/541 (44%)
Query: 3 GRGCSIV-WFRRDLRVEDNPXXXXXXXXXXXXX-XFIWAPEEEGPYYPGRVSRWWXXXXX 60
G G S V WFR+ LR+ DNP +I P G ++RW
Sbjct: 36 GDGASSVHWFRKGLRLHDNPALLAAVRGAHCVRCVYILDPWFAASSSVG-INRWRRYVKQ 94
Query: 61 XXXXXXXXXXGTS--LVTKRSTDSVSSLLEVVKATGATQLFFNHLYDPLSLVRDHRAKEA 118
TS LV+ S SL + + G T+L F + +P RD +
Sbjct: 95 GVEIKETVLRKTSGNLVSCWKVPSSDSLPQ--QEWGVTRLTFEYDSEPFGKERDTAIMKM 152
Query: 119 LTAQGIAVRSFNADLLYEPWDVNDAQGQ-PFATFAAFWEKCLSMPFDPDAPLLPPKRINS 177
G+ V + N+ LY+ + + GQ P T+ F + +S + P P + S
Sbjct: 153 AKEAGVEVVTENSHTLYDLDKIIELNGQKPPLTYKRF-QAIISRM---ELPRKPVGSVTS 208
Query: 178 GDMSRCPSDTLVFEDES-------EKG--SNALLARAWSPGWSNADKALTTFINGP--LI 226
M C ++ DE+ E G + L W G + A L + +
Sbjct: 209 QQMEGCRAEIQESHDETYGVPSLEELGFPTEGLGPAVWQGGETEALARLDKHLERKAWVA 268
Query: 227 EYSKNRRKADS--ATTSFLSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFL 284
Y + R A+S A+ + LSP+L FG +S R ++ R+ + + N ++LF
Sbjct: 269 NYERPRMNANSLLASPTGLSPYLRFGCLSCRLFYY--RLWDLYKKVKRNST--PPLSLFG 324
Query: 285 KSIGLREYSRYMSFNHPYSHE---RPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGM 341
+ + RE+ + N+P P+ + W + W +G+TG+P +DA M
Sbjct: 325 QLLW-REFFYTAATNNPRFDRMEGNPICIQIP---WDRNPEALAKWAEGKTGFPWIDAIM 380
Query: 342 RELWATGWLHDRIRVVVSSFFVKV-LQLPWRWGMKYFWDTLLDADLESDALGWQYISGTI 400
+L GW+H R V+ F + L + W G++ F + LLDAD +A W ++S +
Sbjct: 381 TQLRQEGWIHHLARHAVACFLTRGDLWVSWESGVRVFDELLLDADFSVNAGSWMWLSCSA 440
Query: 401 PDGRAFDRIDNPQFEGYKFDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELG 460
+ F P G + DP+G+Y+RR+LP+L P+ +I+ PWNAPES+ +AA +G
Sbjct: 441 -FFQQFFHCYCPVGFGRRTDPSGDYIRRYLPKLKGFPSRYIYEPWNAPESIQKAAKCVIG 499
Query: 461 SNYPFPIVRIDAAKCRLD-EALSEMWQQEAASRA-AIENGTEEGLGDSSDSAPIAFPPDI 518
+YP PIV A RL+ E + +++QQ + R + + D S+ P+A P I
Sbjct: 500 VDYPRPIVN-HAEASRLNIERMKQVYQQLSRYRGLCLLASVPSCVEDLSN--PVAEPSSI 556
Query: 519 Q 519
Q
Sbjct: 557 Q 557
>UNIPROTKB|Q8QG60 [details] [associations]
symbol:CRY2 "Cryptochrome-2" species:9031 "Gallus gallus"
[GO:0003913 "DNA photolyase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009881 "photoreceptor activity"
evidence=IEA] [GO:0018298 "protein-chromophore linkage"
evidence=IEA] [GO:0048511 "rhythmic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISS] InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 GO:GO:0005634 GO:GO:0005737
GO:GO:0006355 GO:GO:0000166 GO:GO:0006281 GO:GO:0006351
GO:GO:0048511 GO:GO:0009881 GO:GO:0018298 Gene3D:3.40.50.620
InterPro:IPR014729 eggNOG:COG0415 HOGENOM:HOG000245622 KO:K02295
GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645
HOVERGEN:HBG053470 GeneTree:ENSGT00500000044813 EMBL:AY034433
EMBL:AY046568 EMBL:AF251344 IPI:IPI00572393 RefSeq:NP_989575.1
UniGene:Gga.20033 HSSP:P05327 ProteinModelPortal:Q8QG60
STRING:Q8QG60 Ensembl:ENSGALT00000038344 GeneID:374092
KEGG:gga:374092 CTD:1408 InParanoid:Q8QG60 NextBio:20813611
Uniprot:Q8QG60
Length = 582
Score = 382 (139.5 bits), Expect = 3.9e-33, P = 3.9e-33
Identities = 148/536 (27%), Positives = 238/536 (44%)
Query: 4 RG-C-SIVWFRRDLRVEDNPXXXXXXXXXXXXX-XFIWAPEEEGPYYPGRVSRW-WXXXX 59
RG C S+ WFRR LR+ DNP +I P G ++RW +
Sbjct: 9 RGFCRSVHWFRRGLRLHDNPALQAALRGAASLRCIYILDPWFAASSAVG-INRWRFLLQS 67
Query: 60 XXXXXXXXXXXGTSLVTKRS--TDSVSSLLEVVKATGATQLFFNHLYDPLSLVRDHRAKE 117
+ L R TD L K G T+L F + +P RD +
Sbjct: 68 LEDLDNSLRKLNSRLFVVRGQPTDVFPRLF---KEWGVTRLAFEYDSEPFGKERDAAIIK 124
Query: 118 ALTAQGIAVRSFNADLLYEPWDVNDAQG-QPFATFAAFWEKCLSMPFDPDAPLLPPKRIN 176
G+ V N+ LY + + G +P T+ F + +S + P P I
Sbjct: 125 LAKEAGVEVVIENSHTLYNLDRIIELNGNKPPLTYKRF-QAIISRM---ELPKKPVSSIV 180
Query: 177 SGDMSRCPSDTLVFEDE-------SEKG--SNALLARAWSPGWSNADKALTTFINGP--L 225
S M C D D+ E G ++ L W G + A L + +
Sbjct: 181 SQQMETCKVDIQENHDDVYGVPSLEELGFPTDGLAPAVWQGGETEALARLDKHLERKAWV 240
Query: 226 IEYSKNRRKADS--ATTSFLSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLF 283
Y + R A+S A+ + LSP+L FG +S R ++ R+ ++ + N ++L+
Sbjct: 241 ANYERPRMNANSLLASPTGLSPYLRFGCLSCRLFYY--RLWELYKKVKRNST--PPLSLY 296
Query: 284 LKSIGLREYSRYMSFNHPYSHERPLLGHLKF-FSWVVDEGYFKAWRQGRTGYPLVDAGMR 342
+ + RE+ + N+P +R + W + W +G+TG+P +DA M
Sbjct: 297 GQLLW-REFFYTAATNNP-KFDRMEGNPICIQIPWDKNPEALAKWAEGKTGFPWIDAIMT 354
Query: 343 ELWATGWLHDRIRVVVSSFFVKV-LQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIP 401
+L GW+H R V+ F + L + W G++ F + LLDAD +A W ++S +
Sbjct: 355 QLRQEGWIHHLARHAVACFLTRGDLWISWESGVRVFDELLLDADFSVNAGSWMWLSCSA- 413
Query: 402 DGRAFDRIDNPQFEGYKFDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGS 461
+ F P G + DP+G+YV+R+LP+L P+ +I+ PWNAPESV +AA +G
Sbjct: 414 FFQQFFHCYCPVGFGRRTDPSGDYVKRYLPKLKGFPSRYIYEPWNAPESVQKAAKCIIGV 473
Query: 462 NYPFPIVRIDAAKCRLD-EALSEMWQQEAASR-----AAIENGTEEGLGDSSDSAP 511
+YP P+V A RL+ E + +++QQ + R A++ + E+ G +DSAP
Sbjct: 474 DYPKPMVN-HAETSRLNIERMKQIYQQLSRYRGLCLLASVPSCVEDLSGPVTDSAP 528
>ZFIN|ZDB-GENE-010426-2 [details] [associations]
symbol:cry1a "cryptochrome 1a" species:7955 "Danio
rerio" [GO:0006281 "DNA repair" evidence=IEA] [GO:0003913 "DNA
photolyase activity" evidence=IEA] [GO:0009416 "response to light
stimulus" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0005667 "transcription factor complex"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0009649
"entrainment of circadian clock" evidence=IDA] [GO:0042542
"response to hydrogen peroxide" evidence=IEP] InterPro:IPR005101
Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875 ZFIN:ZDB-GENE-010426-2
GO:GO:0045892 GO:GO:0009649 GO:GO:0006281 GO:GO:0005667
GO:GO:0009416 GO:GO:0042542 Gene3D:3.40.50.620 InterPro:IPR014729
KO:K02295 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
HOVERGEN:HBG053470 EMBL:BC124762 IPI:IPI00650675 UniGene:Dr.82313
ProteinModelPortal:Q08BE4 STRING:Q08BE4 KEGG:dre:100003956
InParanoid:Q08BE4 NextBio:20786059 ArrayExpress:Q08BE4
Uniprot:Q08BE4
Length = 619
Score = 378 (138.1 bits), Expect = 1.8e-32, P = 1.8e-32
Identities = 148/557 (26%), Positives = 239/557 (42%)
Query: 7 SIVWFRRDLRVEDNPXXXXXXXXXXXXX-XFIWAPEEEGPYYPGRVSRW-WXXXXXXXXX 64
++ WFR+ LR+ DNP +I P G G +SRW +
Sbjct: 5 TVHWFRKGLRLHDNPSLRDSILGAHSVRCVYILDPWFAGSSNVG-ISRWRFLLQCLEDLD 63
Query: 65 XXXXXXGTSLVTKRS--TDSVSSLLEVVKATGATQLFFNHLYDPLSLVRDHRAKEALTAQ 122
+ L R TD L K +L + + +P RD K+
Sbjct: 64 ASLRKLNSRLFVIRGQPTDVFPRLF---KEWNINRLSYEYDSEPFGKERDAAIKKLANEA 120
Query: 123 GIAVRSFNADLLYEPWDVNDAQG-QPFATFAAFWEKCLSMPFDPDAPLLPPKRINSGDMS 181
G+ V + LY+ + + G Q T+ F M +A P + I + M
Sbjct: 121 GVEVIVRISHTLYDLDKIIELNGGQSPLTYKRFQTLISRM----EAVETPAETITAEVMG 176
Query: 182 RCPSDTLVFEDES-------EKG--SNALLARAWSPGWSNADKALTTFINGP--LIEYSK 230
C + DE E G + L + W G + A L + + + +
Sbjct: 177 PCTTPLSDDHDEKFGVPSLEELGFDTEGLSSAVWPGGETEALTRLERHLERKAWVANFER 236
Query: 231 NRRKADS--ATTSFLSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIG 288
R A+S A+ + LSP+L FG +S R +F+ K + K ++L+ + +
Sbjct: 237 PRMNANSLLASPTGLSPYLRFGCLSCR-LFYF---KLTDLYRKVKKNSSPPLSLYGQLLW 292
Query: 289 LREYSRYMSFNHPYSHE---RPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELW 345
RE+ + N+P + P+ + W + W +GRTG+P +DA M +L
Sbjct: 293 -REFFYTAATNNPRFDKMEGNPICVQIP---WDKNPEALAKWAEGRTGFPWIDAIMTQLR 348
Query: 346 ATGWLHDRIRVVVSSFFVKV-LQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGR 404
GW+H R V+ F + L + W GMK F + LLDAD +A W ++S + +
Sbjct: 349 QEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSVNAGSWMWLSCS-SFFQ 407
Query: 405 AFDRIDNPQFEGYKFDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYP 464
F P G + DPNG+Y+RR+LP L P ++I+ PWNAPESV +AA +G +YP
Sbjct: 408 QFFHCYCPVSFGRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNAPESVQKAAKCIIGVHYP 467
Query: 465 FPIVRIDAAKCRLD-EALSEMWQQEAASRA----AIENGTEEGLGDSSDSAPIAFPPDIQ 519
P+V A RL+ E + +++QQ + R A+ G G++S S + F
Sbjct: 468 MPMVH-HAEASRLNIERMKQIYQQLSCYRGLGLLAMVPSNPNGNGENSTSL-MGFQTGDM 525
Query: 520 MEEIPEPARNNLPTTAR 536
+E+ P+ +P T++
Sbjct: 526 TKEVTTPSGYQMPPTSQ 542
>RGD|620935 [details] [associations]
symbol:Cry2 "cryptochrome 2 (photolyase-like)" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000988 "protein
binding transcription factor activity" evidence=IEA;ISO]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0003684 "damaged DNA
binding" evidence=IEA;ISO] [GO:0003697 "single-stranded DNA
binding" evidence=IEA;ISO] [GO:0003913 "DNA photolyase activity"
evidence=IEA] [GO:0005576 "extracellular region" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=IEA;ISO;ISS] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006606 "protein
import into nucleus" evidence=IEA;ISO] [GO:0007623 "circadian
rhythm" evidence=IEA;IEP;ISO] [GO:0009881 "photoreceptor activity"
evidence=IEA] [GO:0018298 "protein-chromophore linkage"
evidence=IEA] [GO:0019902 "phosphatase binding" evidence=ISO]
[GO:0032515 "negative regulation of phosphoprotein phosphatase
activity" evidence=ISO] [GO:0042752 "regulation of circadian
rhythm" evidence=IEA;ISO] [GO:2000118 "regulation of
sodium-dependent phosphate transport" evidence=IEA;ISO] [GO:0000719
"photoreactive repair" evidence=ISO] [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=ISO]
[GO:0003914 "DNA (6-4) photolyase activity" evidence=ISO]
InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394 InterPro:IPR006050
Pfam:PF00875 RGD:620935 GO:GO:0005739 GO:GO:0005634 GO:GO:0000166
GO:GO:0003684 GO:GO:0007623 GO:GO:0006281 GO:GO:0006351
GO:GO:0042752 GO:GO:0000122 GO:GO:0006606 GO:GO:0003697
GO:GO:0009881 GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729
eggNOG:COG0415 HOGENOM:HOG000245622 KO:K02295 GO:GO:0003913
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 HOVERGEN:HBG053470
GO:GO:0000988 CTD:1408 OrthoDB:EOG4VT5WZ EMBL:AY033877
IPI:IPI00203659 RefSeq:NP_596896.1 UniGene:Rn.21150 HSSP:Q43125
ProteinModelPortal:Q923I8 STRING:Q923I8 PRIDE:Q923I8 GeneID:170917
KEGG:rno:170917 UCSC:RGD:620935 InParanoid:Q923I8 NextBio:621399
ArrayExpress:Q923I8 Genevestigator:Q923I8
GermOnline:ENSRNOG00000007478 Uniprot:Q923I8
Length = 594
Score = 376 (137.4 bits), Expect = 2.4e-32, P = 2.4e-32
Identities = 149/566 (26%), Positives = 242/566 (42%)
Query: 1 MSGRGCSIV-WFRRDLRVEDNPXXXXXXXXXXXXX-XFIWAPEEEGPYYPGRVSRW-WXX 57
M G S V WFR+ LR+ DNP +I P G ++RW +
Sbjct: 16 MGADGASSVHWFRKGLRLHDNPALLAAVRGARCVRCVYILDPWFAASSSVG-INRWRFLL 74
Query: 58 XXXXXXXXXXXXXGTSLVTKRSTDSVSSLLEVVKATGATQLFFNHLYDPLSLVRDHRAKE 117
+ L R + + K G T+L F + +P RD +
Sbjct: 75 QSLEDLDTSLRKLNSRLFVVRGQPA-DVFPRLFKEWGVTRLTFEYDSEPFGKERDAAIMK 133
Query: 118 ALTAQGIAVRSFNADLLYEPWDVNDAQGQ-PFATFAAFWEKCLSMPFDPDAPLLPPKRIN 176
G+ V + N+ LY+ + + GQ P T+ F M + P P ++
Sbjct: 134 MAKEAGVEVVTENSHTLYDLDRIIELNGQKPPLTYKRFQALISRM----ELPKKPVGAVS 189
Query: 177 SGDMSRCPSDTLVFEDES-------EKG--SNALLARAWSPGWSNADKALTTFINGP--L 225
S M C ++ D++ E G + L W G + A L + +
Sbjct: 190 SQHMENCRAEIQENHDDTYGVPSLEELGFPTEGLGPAVWQGGETEALVRLDKHLERKAWV 249
Query: 226 IEYSKNRRKADS--ATTSFLSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLF 283
Y + R A+S A+ + LSP+L FG +S R ++ R+ + + N ++LF
Sbjct: 250 ANYERPRMNANSLLASPTGLSPYLRFGCLSCRLFYY--RLWDLYRKVKRNST--PPLSLF 305
Query: 284 LKSIGLREYSRYMSFNHPYSHE---RPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAG 340
+ + RE+ + N+P P+ + W + W +G+TG+P +DA
Sbjct: 306 GQLLW-REFFYTAATNNPRFDRMEGNPICIQIP---WDRNPEALAKWAEGKTGFPWIDAI 361
Query: 341 MRELWATGWLHDRIRVVVSSFFVKV-LQLPWRWGMKYFWDTLLDADLESDALGWQYISGT 399
M +L GW+H R V+ F + L + W G++ F + LLDAD +A W ++S +
Sbjct: 362 MTQLRQEGWIHHLARHAVACFLTRGDLWVSWESGVRVFDELLLDADFSVNAGSWMWLSCS 421
Query: 400 IPDGRAFDRIDNPQFEGYKFDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIEL 459
+ F P G + DP+G+Y+RR+LP+L P+ +I+ PWNAPESV +AA +
Sbjct: 422 A-FFQQFFHCYCPVGFGRRTDPSGDYIRRYLPKLKGFPSRYIYEPWNAPESVQKAANCII 480
Query: 460 GSNYPFPIVRIDAAKCRLD-EALSEMWQQEAASRA-AIENGTEEGLGDSSDSAPIAFPPD 517
G +YP PIV A RL+ E + +++QQ + R + + D S P+A P
Sbjct: 481 GVDYPRPIVN-HAETSRLNIERMKQIYQQLSRYRGLCLWASVPSCVEDLSH--PVAEPGS 537
Query: 518 IQMEEI----PEPARNNLPTTARRYE 539
Q I P P + + R+ E
Sbjct: 538 SQAGSISNTGPRPLSSGPASPKRKLE 563
>UNIPROTKB|Q923I8 [details] [associations]
symbol:Cry2 "Cryptochrome-2" species:10116 "Rattus
norvegicus" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 PROSITE:PS00394 InterPro:IPR006050 Pfam:PF00875
RGD:620935 GO:GO:0005739 GO:GO:0005634 GO:GO:0000166 GO:GO:0003684
GO:GO:0007623 GO:GO:0006281 GO:GO:0006351 GO:GO:0042752
GO:GO:0000122 GO:GO:0006606 GO:GO:0003697 GO:GO:0009881
GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
HOGENOM:HOG000245622 KO:K02295 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 PROSITE:PS51645 HOVERGEN:HBG053470 GO:GO:0000988
CTD:1408 OrthoDB:EOG4VT5WZ EMBL:AY033877 IPI:IPI00203659
RefSeq:NP_596896.1 UniGene:Rn.21150 HSSP:Q43125
ProteinModelPortal:Q923I8 STRING:Q923I8 PRIDE:Q923I8 GeneID:170917
KEGG:rno:170917 UCSC:RGD:620935 InParanoid:Q923I8 NextBio:621399
ArrayExpress:Q923I8 Genevestigator:Q923I8
GermOnline:ENSRNOG00000007478 Uniprot:Q923I8
Length = 594
Score = 376 (137.4 bits), Expect = 2.4e-32, P = 2.4e-32
Identities = 149/566 (26%), Positives = 242/566 (42%)
Query: 1 MSGRGCSIV-WFRRDLRVEDNPXXXXXXXXXXXXX-XFIWAPEEEGPYYPGRVSRW-WXX 57
M G S V WFR+ LR+ DNP +I P G ++RW +
Sbjct: 16 MGADGASSVHWFRKGLRLHDNPALLAAVRGARCVRCVYILDPWFAASSSVG-INRWRFLL 74
Query: 58 XXXXXXXXXXXXXGTSLVTKRSTDSVSSLLEVVKATGATQLFFNHLYDPLSLVRDHRAKE 117
+ L R + + K G T+L F + +P RD +
Sbjct: 75 QSLEDLDTSLRKLNSRLFVVRGQPA-DVFPRLFKEWGVTRLTFEYDSEPFGKERDAAIMK 133
Query: 118 ALTAQGIAVRSFNADLLYEPWDVNDAQGQ-PFATFAAFWEKCLSMPFDPDAPLLPPKRIN 176
G+ V + N+ LY+ + + GQ P T+ F M + P P ++
Sbjct: 134 MAKEAGVEVVTENSHTLYDLDRIIELNGQKPPLTYKRFQALISRM----ELPKKPVGAVS 189
Query: 177 SGDMSRCPSDTLVFEDES-------EKG--SNALLARAWSPGWSNADKALTTFINGP--L 225
S M C ++ D++ E G + L W G + A L + +
Sbjct: 190 SQHMENCRAEIQENHDDTYGVPSLEELGFPTEGLGPAVWQGGETEALVRLDKHLERKAWV 249
Query: 226 IEYSKNRRKADS--ATTSFLSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLF 283
Y + R A+S A+ + LSP+L FG +S R ++ R+ + + N ++LF
Sbjct: 250 ANYERPRMNANSLLASPTGLSPYLRFGCLSCRLFYY--RLWDLYRKVKRNST--PPLSLF 305
Query: 284 LKSIGLREYSRYMSFNHPYSHE---RPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAG 340
+ + RE+ + N+P P+ + W + W +G+TG+P +DA
Sbjct: 306 GQLLW-REFFYTAATNNPRFDRMEGNPICIQIP---WDRNPEALAKWAEGKTGFPWIDAI 361
Query: 341 MRELWATGWLHDRIRVVVSSFFVKV-LQLPWRWGMKYFWDTLLDADLESDALGWQYISGT 399
M +L GW+H R V+ F + L + W G++ F + LLDAD +A W ++S +
Sbjct: 362 MTQLRQEGWIHHLARHAVACFLTRGDLWVSWESGVRVFDELLLDADFSVNAGSWMWLSCS 421
Query: 400 IPDGRAFDRIDNPQFEGYKFDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIEL 459
+ F P G + DP+G+Y+RR+LP+L P+ +I+ PWNAPESV +AA +
Sbjct: 422 A-FFQQFFHCYCPVGFGRRTDPSGDYIRRYLPKLKGFPSRYIYEPWNAPESVQKAANCII 480
Query: 460 GSNYPFPIVRIDAAKCRLD-EALSEMWQQEAASRA-AIENGTEEGLGDSSDSAPIAFPPD 517
G +YP PIV A RL+ E + +++QQ + R + + D S P+A P
Sbjct: 481 GVDYPRPIVN-HAETSRLNIERMKQIYQQLSRYRGLCLWASVPSCVEDLSH--PVAEPGS 537
Query: 518 IQMEEI----PEPARNNLPTTARRYE 539
Q I P P + + R+ E
Sbjct: 538 SQAGSISNTGPRPLSSGPASPKRKLE 563
>UNIPROTKB|Q49AN0 [details] [associations]
symbol:CRY2 "Cryptochrome-2" species:9606 "Homo sapiens"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0018298
"protein-chromophore linkage" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISS;IDA]
[GO:0003904 "deoxyribodipyrimidine photo-lyase activity"
evidence=IDA] [GO:0003914 "DNA (6-4) photolyase activity"
evidence=IDA] [GO:0000719 "photoreactive repair" evidence=IDA]
[GO:0003684 "damaged DNA binding" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IDA] [GO:0003697 "single-stranded DNA binding"
evidence=IDA] [GO:0009785 "blue light signaling pathway"
evidence=NAS] [GO:0009882 "blue light photoreceptor activity"
evidence=NAS] [GO:0019902 "phosphatase binding" evidence=IPI]
[GO:0032515 "negative regulation of phosphoprotein phosphatase
activity" evidence=IDA] [GO:0007623 "circadian rhythm"
evidence=ISS] [GO:0005576 "extracellular region" evidence=IDA]
[GO:2000118 "regulation of sodium-dependent phosphate transport"
evidence=IDA] [GO:0000988 "protein binding transcription factor
activity" evidence=IDA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR005101
Pfam:PF03441 PROSITE:PS00394 InterPro:IPR006050 Pfam:PF00875
GO:GO:0005739 GO:GO:0005634 GO:GO:0005737 GO:GO:0005576
GO:GO:0000166 GO:GO:0003684 GO:GO:0007623 GO:GO:0006281
GO:GO:0006351 GO:GO:0042752 GO:GO:0000122 GO:GO:0006606
GO:GO:0003697 GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729
Reactome:REACT_24941 EMBL:AC068385 eggNOG:COG0415
HOGENOM:HOG000245622 KO:K02295 GO:GO:0009882 GO:GO:0003913
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 HOVERGEN:HBG053470
GO:GO:0000988 CTD:1408 EMBL:AK294904 EMBL:BC035161 EMBL:BC041814
EMBL:AB014558 IPI:IPI00216898 IPI:IPI00895886 RefSeq:NP_001120929.1
RefSeq:NP_066940.2 UniGene:Hs.532491 ProteinModelPortal:Q49AN0
SMR:Q49AN0 IntAct:Q49AN0 STRING:Q49AN0 DMDM:118572252 PaxDb:Q49AN0
PRIDE:Q49AN0 DNASU:1408 Ensembl:ENST00000417225 GeneID:1408
KEGG:hsa:1408 UCSC:uc009ykw.3 UCSC:uc010rgo.2 GeneCards:GC11P045868
H-InvDB:HIX0201587 HGNC:HGNC:2385 HPA:HPA037577 MIM:603732
neXtProt:NX_Q49AN0 PharmGKB:PA26905 InParanoid:Q49AN0
OrthoDB:EOG4VT5WZ PhylomeDB:Q49AN0 GenomeRNAi:1408 NextBio:5757
ArrayExpress:Q49AN0 Bgee:Q49AN0 CleanEx:HS_CRY2
Genevestigator:Q49AN0 GermOnline:ENSG00000121671 GO:GO:0032515
GO:GO:2000118 Uniprot:Q49AN0
Length = 593
Score = 374 (136.7 bits), Expect = 4.2e-32, P = 4.2e-32
Identities = 142/548 (25%), Positives = 236/548 (43%)
Query: 7 SIVWFRRDLRVEDNPXXXXXXXXXXXXX-XFIWAPEEEGPYYPGRVSRW-WXXXXXXXXX 64
S+ WFR+ LR+ DNP +I P G ++RW +
Sbjct: 24 SVHWFRKGLRLHDNPALLAAVRGARCVRCVYILDPWFAASSSVG-INRWRFLLQSLEDLD 82
Query: 65 XXXXXXGTSLVTKRSTDSVSSLLEVVKATGATQLFFNHLYDPLSLVRDHRAKEALTAQGI 124
+ L R + + K G T+L F + +P RD + G+
Sbjct: 83 TSLRKLNSRLFVVRGQPA-DVFPRLFKEWGVTRLTFEYDSEPFGKERDAAIMKMAKEAGV 141
Query: 125 AVRSFNADLLYEPWDVNDAQGQ-PFATFAAFWEKCLSMPFDPDAPLLPPKRINSGDMSRC 183
V + N+ LY+ + + GQ P T+ F + +S + P P + S M C
Sbjct: 142 EVVTENSHTLYDLDRIIELNGQKPPLTYKRF-QAIISRM---ELPKKPVGLVTSQQMESC 197
Query: 184 PSDTLVFEDES-------EKG--SNALLARAWSPGWSNADKALTTFINGP--LIEYSKNR 232
++ DE+ E G + L W G + A L + + Y + R
Sbjct: 198 RAEIQENHDETYGVPSLEELGFPTEGLGPAVWQGGETEALARLDKHLERKAWVANYERPR 257
Query: 233 RKADS--ATTSFLSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLR 290
A+S A+ + LSP+L FG +S R ++ R+ + + N ++LF + + R
Sbjct: 258 MNANSLLASPTGLSPYLRFGCLSCRLFYY--RLWDLYKKVKRNST--PPLSLFGQLLW-R 312
Query: 291 EYSRYMSFNHPYSHE---RPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWAT 347
E+ + N+P P+ + W + W +G+TG+P +DA M +L
Sbjct: 313 EFFYTAATNNPRFDRMEGNPICIQIP---WDRNPEALAKWAEGKTGFPWIDAIMTQLRQE 369
Query: 348 GWLHDRIRVVVSSFFVKV-LQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAF 406
GW+H R V+ F + L + W G++ F + LLDAD +A W ++S + + F
Sbjct: 370 GWIHHLARHAVACFLTRGDLWVSWESGVRVFDELLLDADFSVNAGSWMWLSCSA-FFQQF 428
Query: 407 DRIDNPQFEGYKFDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPFP 466
P G + DP+G+Y+RR+LP+L P+ +I+ PWNAPES+ +AA +G +YP P
Sbjct: 429 FHCYCPVGFGRRTDPSGDYIRRYLPKLKAFPSRYIYEPWNAPESIQKAAKCIIGVDYPRP 488
Query: 467 IVRIDAAKCRLD-EALSEMWQQEAASRAAIENGTEEGLGDSSDSAPIAFPPDIQMEEIPE 525
IV A RL+ E + +++QQ + R + + S P+A P Q +
Sbjct: 489 IVN-HAETSRLNIERMKQIYQQLSRYRGLCLLASVPSCVEDL-SHPVAEPSSSQAGSMSS 546
Query: 526 PARNNLPT 533
LP+
Sbjct: 547 AGPRPLPS 554
>UNIPROTKB|B4DZD6 [details] [associations]
symbol:CRY2 "Cryptochrome-2" species:9606 "Homo sapiens"
[GO:0003913 "DNA photolyase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0006606 "protein import into nucleus"
evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IEA]
[GO:0042752 "regulation of circadian rhythm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050
Pfam:PF00875 GO:GO:0005739 GO:GO:0005634 GO:GO:0005737
GO:GO:0007623 GO:GO:0006281 GO:GO:0042752 GO:GO:0006606
Gene3D:3.40.50.620 InterPro:IPR014729 EMBL:AC068385
HOGENOM:HOG000245622 KO:K02295 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 HOVERGEN:HBG053470 CTD:1408 IPI:IPI00216898
RefSeq:NP_066940.2 UniGene:Hs.532491 DNASU:1408 GeneID:1408
KEGG:hsa:1408 HGNC:HGNC:2385 PharmGKB:PA26905 GenomeRNAi:1408
NextBio:5757 OMA:LCKHLLI EMBL:AK302865 ProteinModelPortal:B4DZD6
SMR:B4DZD6 STRING:B4DZD6 PRIDE:B4DZD6 Ensembl:ENST00000443527
UCSC:uc010rgn.2 ArrayExpress:B4DZD6 Bgee:B4DZD6 Uniprot:B4DZD6
Length = 614
Score = 374 (136.7 bits), Expect = 5.2e-32, P = 5.2e-32
Identities = 142/548 (25%), Positives = 236/548 (43%)
Query: 7 SIVWFRRDLRVEDNPXXXXXXXXXXXXX-XFIWAPEEEGPYYPGRVSRW-WXXXXXXXXX 64
S+ WFR+ LR+ DNP +I P G ++RW +
Sbjct: 45 SVHWFRKGLRLHDNPALLAAVRGARCVRCVYILDPWFAASSSVG-INRWRFLLQSLEDLD 103
Query: 65 XXXXXXGTSLVTKRSTDSVSSLLEVVKATGATQLFFNHLYDPLSLVRDHRAKEALTAQGI 124
+ L R + + K G T+L F + +P RD + G+
Sbjct: 104 TSLRKLNSRLFVVRGQPA-DVFPRLFKEWGVTRLTFEYDSEPFGKERDAAIMKMAKEAGV 162
Query: 125 AVRSFNADLLYEPWDVNDAQGQ-PFATFAAFWEKCLSMPFDPDAPLLPPKRINSGDMSRC 183
V + N+ LY+ + + GQ P T+ F + +S + P P + S M C
Sbjct: 163 EVVTENSHTLYDLDRIIELNGQKPPLTYKRF-QAIISRM---ELPKKPVGLVTSQQMESC 218
Query: 184 PSDTLVFEDES-------EKG--SNALLARAWSPGWSNADKALTTFINGP--LIEYSKNR 232
++ DE+ E G + L W G + A L + + Y + R
Sbjct: 219 RAEIQENHDETYGVPSLEELGFPTEGLGPAVWQGGETEALARLDKHLERKAWVANYERPR 278
Query: 233 RKADS--ATTSFLSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLR 290
A+S A+ + LSP+L FG +S R ++ R+ + + N ++LF + + R
Sbjct: 279 MNANSLLASPTGLSPYLRFGCLSCRLFYY--RLWDLYKKVKRNST--PPLSLFGQLLW-R 333
Query: 291 EYSRYMSFNHPYSHE---RPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWAT 347
E+ + N+P P+ + W + W +G+TG+P +DA M +L
Sbjct: 334 EFFYTAATNNPRFDRMEGNPICIQIP---WDRNPEALAKWAEGKTGFPWIDAIMTQLRQE 390
Query: 348 GWLHDRIRVVVSSFFVKV-LQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAF 406
GW+H R V+ F + L + W G++ F + LLDAD +A W ++S + + F
Sbjct: 391 GWIHHLARHAVACFLTRGDLWVSWESGVRVFDELLLDADFSVNAGSWMWLSCSA-FFQQF 449
Query: 407 DRIDNPQFEGYKFDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPFP 466
P G + DP+G+Y+RR+LP+L P+ +I+ PWNAPES+ +AA +G +YP P
Sbjct: 450 FHCYCPVGFGRRTDPSGDYIRRYLPKLKAFPSRYIYEPWNAPESIQKAAKCIIGVDYPRP 509
Query: 467 IVRIDAAKCRLD-EALSEMWQQEAASRAAIENGTEEGLGDSSDSAPIAFPPDIQMEEIPE 525
IV A RL+ E + +++QQ + R + + S P+A P Q +
Sbjct: 510 IVN-HAETSRLNIERMKQIYQQLSRYRGLCLLASVPSCVEDL-SHPVAEPSSSQAGSMSS 567
Query: 526 PARNNLPT 533
LP+
Sbjct: 568 AGPRPLPS 575
>MGI|MGI:1270859 [details] [associations]
symbol:Cry2 "cryptochrome 2 (photolyase-like)" species:10090
"Mus musculus" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0000988 "protein binding
transcription factor activity" evidence=ISO] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003684 "damaged DNA binding"
evidence=ISO] [GO:0003697 "single-stranded DNA binding"
evidence=ISO] [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006606 "protein import into
nucleus" evidence=IPI] [GO:0007623 "circadian rhythm" evidence=IMP]
[GO:0009881 "photoreceptor activity" evidence=IEA] [GO:0016829
"lyase activity" evidence=IEA] [GO:0018298 "protein-chromophore
linkage" evidence=IEA] [GO:0019902 "phosphatase binding"
evidence=ISO] [GO:0032515 "negative regulation of phosphoprotein
phosphatase activity" evidence=ISO] [GO:0042752 "regulation of
circadian rhythm" evidence=IMP] [GO:0048511 "rhythmic process"
evidence=IEA] [GO:0050896 "response to stimulus" evidence=IEA]
InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394 InterPro:IPR006050
Pfam:PF00875 MGI:MGI:1270859 GO:GO:0005829 GO:GO:0005739
GO:GO:0005654 GO:GO:0000166 GO:GO:0003684 GO:GO:0007623
GO:GO:0006281 GO:GO:0006351 GO:GO:0042752 GO:GO:0000122
GO:GO:0006606 GO:GO:0003697 GO:GO:0009881 GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 Reactome:REACT_109335
Reactome:REACT_24972 eggNOG:COG0415 HOGENOM:HOG000245622 KO:K02295
GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645
HOVERGEN:HBG053470 GeneTree:ENSGT00500000044813 GO:GO:0000988
CTD:1408 OrthoDB:EOG4VT5WZ EMBL:AF156987 EMBL:AK041696
EMBL:AK133781 EMBL:BC054794 EMBL:BC066799 EMBL:AK172994
EMBL:AB003433 IPI:IPI00128234 RefSeq:NP_001106804.1
RefSeq:NP_034093.1 UniGene:Mm.254181 ProteinModelPortal:Q9R194
SMR:Q9R194 DIP:DIP-38517N IntAct:Q9R194 STRING:Q9R194
PhosphoSite:Q9R194 PRIDE:Q9R194 Ensembl:ENSMUST00000090559
Ensembl:ENSMUST00000111278 GeneID:12953 KEGG:mmu:12953
InParanoid:Q9R194 OMA:LCKHLLI NextBio:282666 Bgee:Q9R194
CleanEx:MM_CRY2 Genevestigator:Q9R194 GermOnline:ENSMUSG00000068742
Uniprot:Q9R194
Length = 592
Score = 373 (136.4 bits), Expect = 5.4e-32, P = 5.4e-32
Identities = 137/509 (26%), Positives = 223/509 (43%)
Query: 1 MSGRGCSIV-WFRRDLRVEDNPXXXXXXXXXXXXX-XFIWAPEEEGPYYPGRVSRW-WXX 57
M G S V WFR+ LR+ DNP +I P G ++RW +
Sbjct: 16 MGADGASSVHWFRKGLRLHDNPALLAAVRGARCVRCVYILDPWFAASSSVG-INRWRFLL 74
Query: 58 XXXXXXXXXXXXXGTSLVTKRSTDSVSSLLEVVKATGATQLFFNHLYDPLSLVRDHRAKE 117
+ L R + + K G T+L F + +P RD +
Sbjct: 75 QSLEDLDTSLRKLNSRLFVVRGQPA-DVFPRLFKEWGVTRLTFEYDSEPFGKERDAAIMK 133
Query: 118 ALTAQGIAVRSFNADLLYEPWDVNDAQGQ-PFATFAAFWEKCLSMPFDPDAPLLPPKRIN 176
G+ V + N+ LY+ + + GQ P T+ F M + P P ++
Sbjct: 134 MAKEAGVEVVTENSHTLYDLDRIIELNGQKPPLTYKRFQALISRM----ELPKKPAVAVS 189
Query: 177 SGDMSRCPSDTLVFEDES-------EKG--SNALLARAWSPGWSNADKALTTFINGP--L 225
S M C ++ D++ E G + L W G + A L + +
Sbjct: 190 SQQMESCRAEIQENHDDTYGVPSLEELGFPTEGLGPAVWQGGETEALARLDKHLERKAWV 249
Query: 226 IEYSKNRRKADS--ATTSFLSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLF 283
Y + R A+S A+ + LSP+L FG +S R ++ R+ + + N ++LF
Sbjct: 250 ANYERPRMNANSLLASPTGLSPYLRFGCLSCRLFYY--RLWDLYKKVKRNST--PPLSLF 305
Query: 284 LKSIGLREYSRYMSFNHPYSHE---RPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAG 340
+ + RE+ + N+P P+ + W + W +G+TG+P +DA
Sbjct: 306 GQLLW-REFFYTAATNNPRFDRMEGNPICIQIP---WDRNPEALAKWAEGKTGFPWIDAI 361
Query: 341 MRELWATGWLHDRIRVVVSSFFVKV-LQLPWRWGMKYFWDTLLDADLESDALGWQYISGT 399
M +L GW+H R V+ F + L + W G++ F + LLDAD +A W ++S +
Sbjct: 362 MTQLRQEGWIHHLARHAVACFLTRGDLWVSWESGVRVFDELLLDADFSVNAGSWMWLSCS 421
Query: 400 IPDGRAFDRIDNPQFEGYKFDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIEL 459
+ F P G + DP+G+Y+RR+LP+L P+ +I+ PWNAPESV +AA +
Sbjct: 422 A-FFQQFFHCYCPVGFGRRTDPSGDYIRRYLPKLKGFPSRYIYEPWNAPESVQKAAKCII 480
Query: 460 GSNYPFPIVRIDAAKCRLD-EALSEMWQQ 487
G +YP PIV A RL+ E + +++QQ
Sbjct: 481 GVDYPRPIVN-HAETSRLNIERMKQIYQQ 508
>UNIPROTKB|F1PNC9 [details] [associations]
symbol:CRY2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006281 "DNA repair" evidence=IEA]
[GO:0003913 "DNA photolyase activity" evidence=IEA]
InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875
GO:GO:0006281 Gene3D:3.40.50.620 InterPro:IPR014729 KO:K02295
GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
GeneTree:ENSGT00500000044813 CTD:1408 OMA:LCKHLLI EMBL:AAEX03011505
RefSeq:XP_540761.2 Ensembl:ENSCAFT00000014927 GeneID:483641
KEGG:cfa:483641 Uniprot:F1PNC9
Length = 593
Score = 373 (136.4 bits), Expect = 5.5e-32, P = 5.5e-32
Identities = 143/549 (26%), Positives = 237/549 (43%)
Query: 7 SIVWFRRDLRVEDNPXXXXXXXXXXXXX-XFIWAPEEEGPYYPGRVSRW-WXXXXXXXXX 64
S+ WFR+ LR+ DNP +I P G ++RW +
Sbjct: 24 SVHWFRKGLRLHDNPALLAAVRGARCVRCVYILDPWFAASSSVG-INRWRFLLQSLEDLD 82
Query: 65 XXXXXXGTSLVTKRSTDSVSSLLEVVKATGATQLFFNHLYDPLSLVRDHRAKEALTAQGI 124
+ L R + + K G T+L F + +P RD + G+
Sbjct: 83 TSLRKLNSRLFVVRGQPA-DVFPRLFKEWGVTRLTFEYDSEPFGKERDAAIMKMAKEAGV 141
Query: 125 AVRSFNADLLYEPWDVNDAQGQ-PFATFAAFWEKCLSMPFDPDAPLLPPKRINSGDMSRC 183
V + N+ LY+ + + GQ P T+ F + +S + P P + S M C
Sbjct: 142 EVVTENSHTLYDLDKIIELNGQKPPLTYKRF-QAIISRM---ELPKKPVGSVTSQQMESC 197
Query: 184 PSDTLVFEDES-------EKG--SNALLARAWSPGWSNADKALTTFINGP--LIEYSKNR 232
+D D++ E G + L W G + A L + + Y + R
Sbjct: 198 RADIQDNHDDTYGVPSLEELGFPTEGLGPAVWQGGETEALARLDKHLERKAWVANYERPR 257
Query: 233 RKADS--ATTSFLSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLR 290
A+S A+ + LSP+L FG +S R ++ R+ + + N ++LF + + R
Sbjct: 258 MNANSLLASPTGLSPYLRFGCLSCRLFYY--RLWDLYKKVKRNST--PPLSLFGQLLW-R 312
Query: 291 EYSRYMSFNHPYSHE---RPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWAT 347
E+ + N+P P+ + W + W +G+TG+P +DA M +L
Sbjct: 313 EFFYTAATNNPRFDRMEGNPICIQIP---WDRNPEALAKWAEGKTGFPWIDAIMTQLRQE 369
Query: 348 GWLHDRIRVVVSSFFVKV-LQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAF 406
GW+H R V+ F + L + W G++ F + LLDAD +A W ++S + + F
Sbjct: 370 GWIHHLARHAVACFLTRGDLWVSWESGVRVFDELLLDADFSVNAGSWMWLSCSA-FFQQF 428
Query: 407 DRIDNPQFEGYKFDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPFP 466
P G + DP+G+Y+RR+LP L P+ +I+ PWNAPES+ +AA +G +YP P
Sbjct: 429 FHCYCPVGFGRRTDPSGDYIRRYLPILKGFPSRYIYEPWNAPESIQKAAKCIIGVDYPRP 488
Query: 467 IVRIDAAKCRLD-EALSEMWQQEAASRA-AIENGTEEGLGDSSDSAPIAFPPDIQMEEIP 524
IV A RL+ E + +++QQ + R + + D S+ P+A P Q +
Sbjct: 489 IVN-HAETSRLNIERMKQIYQQLSRYRGLCLLASVPSCVEDLSN--PVAEPSSSQTGSMS 545
Query: 525 EPARNNLPT 533
LP+
Sbjct: 546 SAGPRPLPS 554
>ZFIN|ZDB-GENE-010426-3 [details] [associations]
symbol:cry1b "cryptochrome 1b" species:7955 "Danio
rerio" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875 ZFIN:ZDB-GENE-010426-3
GO:GO:0006281 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0003913
SUPFAM:SSF52425 SUPFAM:SSF48173 HOVERGEN:HBG053470 EMBL:AB042249
IPI:IPI00863245 UniGene:Dr.158985 ProteinModelPortal:Q9I916
STRING:Q9I916 ArrayExpress:Q9I916 Uniprot:Q9I916
Length = 606
Score = 373 (136.4 bits), Expect = 6.3e-32, P = 6.3e-32
Identities = 151/570 (26%), Positives = 249/570 (43%)
Query: 7 SIVWFRRDLRVEDNPXXXXXXXXXXXXX-XFIWAPEEEGPYYPGRVSRW-WXXXXXXXXX 64
++ WFR+ LR+ DNP +I P G G +SRW +
Sbjct: 5 TVHWFRKGLRLHDNPSLRDSIKGADNLRCVYILDPWFAGSSNVG-ISRWRFLLQCLEDLD 63
Query: 65 XXXXXXGTSLVTKRS--TDSVSSLLEVVKATGATQLFFNHLYDPLSLVRDHRAKEALTAQ 122
+ L R TD L + K + +L + + +P RD ++ T
Sbjct: 64 ASLRKLNSRLFVIRGQPTDVFPRLFKEWKIS---RLSYEYDSEPFGKDRDAAIRKLATEA 120
Query: 123 GIAVRSFNADLLYEPWDVNDAQG-QPFATFAAFWEKCLSMPFDPDAPLLPPKRINSGDMS 181
G+ V + LY+ + + G Q T+ F + L DP +P + I + M
Sbjct: 121 GVEVFVRISHTLYDLDKIIEFNGGQSPLTYKRF--QTLISRMDPVE--MPAETITAEIMG 176
Query: 182 RCPSDTLVFEDESEK-GSNAL---------LARA-WSPGWSNADKALTTFINGP--LIEY 228
+C T V +D K G +L L+ A W G + A L + + +
Sbjct: 177 KC--STPVSDDHDNKFGVPSLEELGFETEGLSTAVWPGGETEALTRLERHLERKAWVANF 234
Query: 229 SKNRRKADS--ATTSFLSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKS 286
+ R A+S A+ + LSP+L FG +S R +F+ K + K S++L+ +
Sbjct: 235 ERPRMNANSLLASPTGLSPYLRFGCLSCR-LFYF---KLTDLYRKVKKNSTPSLSLYGQL 290
Query: 287 IGLREYSRYMSFNHPYSHERPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWA 346
+ RE+ + N+P+ + W + W +G+TG+P +DA M +L
Sbjct: 291 LW-REFFYTAATNNPHFDKMEFNPICVQIPWDRNPEALAKWAEGQTGFPWIDAIMTQLRQ 349
Query: 347 TGWLHDRIRVVVSSFFVKV-LQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRA 405
GW+H R V+ F + L + W GMK F + LLDAD +A W ++S + +
Sbjct: 350 EGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSVNAGSWMWLSCS-SFFQQ 408
Query: 406 FDRIDNPQFEGYKFDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPF 465
F P G + DPNG+Y+RR+LP L P ++I+ PWNAPESV + A +G +YP
Sbjct: 409 FFHCYCPVGFGRRTDPNGDYIRRYLPILRGFPAKFIYDPWNAPESVQKVAKCIIGVHYPK 468
Query: 466 PIVR-IDAAKCRLDEALSEMWQQEAASR-----AAIENGT---EEGLGDSSDSAPIAFPP 516
P+V +A++ + E + +++QQ + R A I + T E+ G S
Sbjct: 469 PMVNHAEASRINI-ERMKQIYQQLSCYRGLGLLATIPSNTANNEDSNGAGPSSGDTQEST 527
Query: 517 DIQMEEIPEPARNNLPTTARRYEDQMVPSM 546
I + +P +++ P A Q+V S+
Sbjct: 528 HITVHTLPASSQSEFPAFAVSRGQQLVNSV 557
>UNIPROTKB|F1SHJ9 [details] [associations]
symbol:CRY2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000118 "regulation of sodium-dependent phosphate
transport" evidence=IEA] [GO:0042752 "regulation of circadian
rhythm" evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IEA]
[GO:0006606 "protein import into nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=IEA] [GO:0003684 "damaged
DNA binding" evidence=IEA] [GO:0000988 "protein binding
transcription factor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0003913
"DNA photolyase activity" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875 GO:GO:0005739
GO:GO:0005634 GO:GO:0003684 GO:GO:0007623 GO:GO:0006281
GO:GO:0042752 GO:GO:0000122 GO:GO:0006606 GO:GO:0003697
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 GeneTree:ENSGT00500000044813 GO:GO:0000988
OMA:LCKHLLI EMBL:FP101987 Ensembl:ENSSSCT00000014494 Uniprot:F1SHJ9
Length = 613
Score = 371 (135.7 bits), Expect = 1.2e-31, P = 1.2e-31
Identities = 143/549 (26%), Positives = 235/549 (42%)
Query: 7 SIVWFRRDLRVEDNPXXXXXXXXXXXXX-XFIWAPEEEGPYYPGRVSRW-WXXXXXXXXX 64
S+ WFR+ LR+ DNP +I P G ++RW +
Sbjct: 44 SVHWFRKGLRLHDNPALLAAVRGAHCVRCVYILDPWFAASSSVG-INRWRFLLQSLEDLD 102
Query: 65 XXXXXXGTSLVTKRSTDSVSSLLEVVKATGATQLFFNHLYDPLSLVRDHRAKEALTAQGI 124
+ L R + + G T+L F + +P RD + G+
Sbjct: 103 TSLRKLNSRLFVVRGQPA-DVFPGYSREWGVTRLTFEYDSEPFGKERDAAIMKMAKEAGV 161
Query: 125 AVRSFNADLLYEPWDVNDAQGQ-PFATFAAFWEKCLSMPFDPDAPLLPPKRINSGDMSRC 183
V + N+ LY+ + + GQ P T+ F M + P P + S M C
Sbjct: 162 EVVTENSHTLYDLDKIIELNGQKPPLTYKRFQALISRM----ELPKKPVGSVTSQQMESC 217
Query: 184 PSDTLVFEDES-------EKG--SNALLARAWSPGWSNADKALTTFINGP--LIEYSKNR 232
++ DE+ E G + L W G + A L + + Y + R
Sbjct: 218 RAEIQENHDETYGVPSLEELGFPTEGLGPAVWQGGETEALARLDKHLERKAWVANYERPR 277
Query: 233 RKADS--ATTSFLSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLR 290
A+S A+ + LSP+L FG +S R ++ R+ + + N ++LF + + R
Sbjct: 278 MNANSLLASPTGLSPYLRFGCLSCRLFYY--RLWDLYKKVKRNST--PPLSLFGQLLW-R 332
Query: 291 EYSRYMSFNHPYSHE---RPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWAT 347
E+ + N+P P+ + W + W +G+TG+P +DA M +L
Sbjct: 333 EFFYTAATNNPRFDRMEGNPICIQIP---WDRNPEALAKWAEGKTGFPWIDAIMTQLRQE 389
Query: 348 GWLHDRIRVVVSSFFVKV-LQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAF 406
GW+H R V+ F + L + W G++ F + LLDAD +A W ++S + + F
Sbjct: 390 GWIHHLARHAVACFLTRGDLWVSWESGVRVFDELLLDADFSVNAGSWMWLSCSA-FFQQF 448
Query: 407 DRIDNPQFEGYKFDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPFP 466
P G + DP+G+Y+RR+LP+L P+ +I+ PWNAPESV +AA +G +YP P
Sbjct: 449 FHCYCPVGFGRRTDPSGDYIRRYLPKLKGFPSRYIYEPWNAPESVQKAAKCIIGVDYPRP 508
Query: 467 IVRIDAAKCRLD-EALSEMWQQEAASRA-AIENGTEEGLGDSSDSAPIAFPPDIQMEEIP 524
IV A RL+ E + +++QQ + R + + D S+ P+A P Q +
Sbjct: 509 IVN-HAETSRLNIERMKQIYQQLSRYRGLCLLASVPSCVEDLSN--PVAEPSSSQAGSVS 565
Query: 525 EPARNNLPT 533
LP+
Sbjct: 566 AAGPRPLPS 574
>TAIR|locus:2093217 [details] [associations]
symbol:UVR3 "UV REPAIR DEFECTIVE 3" species:3702
"Arabidopsis thaliana" [GO:0003913 "DNA photolyase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM]
[GO:0003914 "DNA (6-4) photolyase activity" evidence=ISS;IDA]
[GO:0009411 "response to UV" evidence=IMP] InterPro:IPR005101
Pfam:PF03441 PROSITE:PS00394 PROSITE:PS00691 InterPro:IPR006050
Pfam:PF00875 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009411
GO:GO:0000166 GO:GO:0003677 GO:GO:0006281 EMBL:AB017071
Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
HOGENOM:HOG000245622 KO:K02295 SUPFAM:SSF52425 SUPFAM:SSF48173
PROSITE:PS51645 EMBL:AB003687 EMBL:AB017331 IPI:IPI00545198
IPI:IPI00657032 RefSeq:NP_001030703.1 RefSeq:NP_566520.1
UniGene:At.188 PDB:3FY4 PDBsum:3FY4 ProteinModelPortal:O48652
SMR:O48652 STRING:O48652 EnsemblPlants:AT3G15620.1 GeneID:820804
KEGG:ath:AT3G15620 GeneFarm:1941 TAIR:At3g15620 InParanoid:O48652
OMA:CLSARTF PhylomeDB:O48652 ProtClustDB:CLSN2688412
BioCyc:MetaCyc:MONOMER-15021 EvolutionaryTrace:O48652
Genevestigator:O48652 GO:GO:0003914 Uniprot:O48652
Length = 556
Score = 363 (132.8 bits), Expect = 5.2e-31, P = 5.2e-31
Identities = 143/531 (26%), Positives = 230/531 (43%)
Query: 2 SGRGCSIVWFRRDLRVEDNPXXXXXXXXXXXXX-XFIWAPE--EEGP--YYPGR----VS 52
+G G S++WFR+ LRV DNP F+ P E P + PG V+
Sbjct: 22 TGSG-SLIWFRKGLRVHDNPALEYASKGSEFMYPVFVIDPHYMESDPSAFSPGSSRAGVN 80
Query: 53 RW-WXXXXXXXXXXXXXXXGTSLVTKRSTDSVSSLLEVVKATGATQLFFNHLYDPLSLVR 111
R + G+ L+ + L+ ++ +L F + DP
Sbjct: 81 RIRFLLESLKDLDSSLKKLGSRLLVFKGEPG-EVLVRCLQEWKVKRLCFEYDTDPYYQAL 139
Query: 112 DHRAKEALTAQGIAVRSFNADLLYEPWDVNDAQG-QPFATFAAFWE-----KCLSMPFDP 165
D + K+ ++ G+ V S + L+ P + + G +P ++ +F + C
Sbjct: 140 DVKVKDYASSTGVEVFSPVSHTLFNPAHIIEKNGGKPPLSYQSFLKVAGEPSCAKSELVM 199
Query: 166 DAPLLPP-KRINSGDMSRCPS-DTLVFEDESEKGSNALLARAWSP---GWSNADKALTTF 220
LPP I + +S PS + L ++D+ + W+P G S A K LT
Sbjct: 200 SYSSLPPIGDIGNLGISEVPSLEELGYKDDEQAD--------WTPFRGGESEALKRLTKS 251
Query: 221 INGPLIEYSKNRRKAD-SA----TTSFLSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKA 275
I+ + + K D SA T+ +SP+L FG +S R + ++ + + K
Sbjct: 252 ISDKAWVANFEKPKGDPSAFLKPATTVMSPYLKFGCLSSRYFYQCLQ----NIYKDVKKH 307
Query: 276 GDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFSWVVDEGYFKAWRQGRTGYP 335
V+L L + RE+ +F P + K W D AWR G+TGYP
Sbjct: 308 TSPPVSL-LGQLLWREFFYTTAFGTPNFDKMKGNRICKQIPWNEDHAMLAAWRDGKTGYP 366
Query: 336 LVDAGMRELWATGWLHDRIRVVVSSFFVKV-LQLPWRWGMKYFWDTLLDADLESDALGWQ 394
+DA M +L GW+H R V+ F + L + W G F L+D+D + W
Sbjct: 367 WIDAIMVQLLKWGWMHHLARHCVACFLTRGDLFIHWEQGRDVFERLLIDSDWAINNGNWM 426
Query: 395 YISGTIPDGRAFDRIDNPQFEGYKFDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQA 454
++S + F+RI +P G K+DP+G+Y+R +LP L +P ++I+ PW AP SV
Sbjct: 427 WLSCS-SFFYQFNRIYSPISFGKKYDPDGKYIRHFLPVLKDMPKQYIYEPWTAPLSVQTK 485
Query: 455 AGIELGSNYPFPIVRIDAAKCRLDEALSEMWQQEAASRAAIENGTEEGLGD 505
A +G +YP P+V D+A E +M + A ++ EE L D
Sbjct: 486 ANCIVGKDYPKPMVLHDSAS---KECKRKMGEAYALNKKMDGKVDEENLRD 533
>UNIPROTKB|Q16526 [details] [associations]
symbol:CRY1 "Cryptochrome-1" species:9606 "Homo sapiens"
[GO:0006281 "DNA repair" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0018298 "protein-chromophore linkage"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042752 "regulation
of circadian rhythm" evidence=ISS] [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=IDA]
[GO:0003914 "DNA (6-4) photolyase activity" evidence=IDA]
[GO:0009882 "blue light photoreceptor activity" evidence=NAS]
[GO:0003690 "double-stranded DNA binding" evidence=IDA] [GO:0009785
"blue light signaling pathway" evidence=NAS] [GO:0019902
"phosphatase binding" evidence=IPI] [GO:0003677 "DNA binding"
evidence=TAS] [GO:0000988 "protein binding transcription factor
activity" evidence=IDA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394 InterPro:IPR006050
Pfam:PF00875 GO:GO:0005739 GO:GO:0005634 GO:GO:0000166
GO:GO:0007623 GO:GO:0006281 GO:GO:0006351 GO:GO:0042752
GO:GO:0000122 GO:GO:0003690 GO:GO:0018298 Gene3D:3.40.50.620
InterPro:IPR014729 Reactome:REACT_24941 eggNOG:COG0415
HOGENOM:HOG000245622 KO:K02295 GO:GO:0009882 GO:GO:0003913
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 CTD:1407
HOVERGEN:HBG053470 EMBL:D84657 EMBL:D83702 EMBL:BC030519
IPI:IPI00002540 RefSeq:NP_004066.1 UniGene:Hs.151573
ProteinModelPortal:Q16526 SMR:Q16526 IntAct:Q16526
MINT:MINT-1437226 STRING:Q16526 PhosphoSite:Q16526 DMDM:74735764
PaxDb:Q16526 PRIDE:Q16526 DNASU:1407 Ensembl:ENST00000008527
GeneID:1407 KEGG:hsa:1407 UCSC:uc001tmi.3 GeneCards:GC12M107385
HGNC:HGNC:2384 HPA:CAB018762 MIM:601933 neXtProt:NX_Q16526
PharmGKB:PA26904 InParanoid:Q16526 OMA:FDTDGLP OrthoDB:EOG4DBTDC
PhylomeDB:Q16526 ChiTaRS:CRY1 GenomeRNAi:1407 NextBio:5753
ArrayExpress:Q16526 Bgee:Q16526 CleanEx:HS_CRY1
Genevestigator:Q16526 GermOnline:ENSG00000008405 GO:GO:0000988
Uniprot:Q16526
Length = 586
Score = 364 (133.2 bits), Expect = 5.9e-31, P = 5.9e-31
Identities = 141/534 (26%), Positives = 234/534 (43%)
Query: 7 SIVWFRRDLRVEDNPXXXXXXXXXXXXX-XFIWAPEEEGPYYPGRVSRW-WXXXXXXXXX 64
++ WFR+ LR+ DNP +I P G G ++RW +
Sbjct: 5 AVHWFRKGLRLHDNPALKECIQGADTIRCVYILDPWFAGSSNVG-INRWRFLLQCLEDLD 63
Query: 65 XXXXXXGTSLVTKRSTDSVSSLLEVVKATGATQLFFNHLYDPLSLVRDHRAKEALTAQGI 124
+ L R + + K T+L + +P RD K+ T G+
Sbjct: 64 ANLRKLNSRLFVIRGQPA-DVFPRLFKEWNITKLSIEYDSEPFGKERDAAIKKLATEAGV 122
Query: 125 AVRSFNADLLYEPWDVNDAQG-QPFATFAAFWEKCLSMPFDPDAPLLPPKRINSGDMSRC 183
V + LY+ + + G QP T+ F + L +P +P + I S + +C
Sbjct: 123 EVIVRISHTLYDLDKIIELNGGQPPLTYKRF--QTLISKMEPLE--IPVETITSEVIEKC 178
Query: 184 PSDTLVFEDES-------EKG--SNALLARAWSPGWSNADKALTTFINGP--LIEYSKNR 232
+ DE E G ++ L + W G + A L + + + + R
Sbjct: 179 TTPLSDDHDEKYGVPSLEELGFDTDGLSSAVWPGGETEALTRLERHLERKAWVANFERPR 238
Query: 233 RKADS--ATTSFLSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLR 290
A+S A+ + LSP+L FG +S R +F+ K + K ++L+ + + R
Sbjct: 239 MNANSLLASPTGLSPYLRFGCLSCR-LFYF---KLTDLYKKVKKNSSPPLSLYGQLLW-R 293
Query: 291 EYSRYMSFNHPYSHE---RPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWAT 347
E+ + N+P + P+ + W + W +GRTG+P +DA M +L
Sbjct: 294 EFFYTAATNNPRFDKMEGNPICVQIP---WDKNPEALAKWAEGRTGFPWIDAIMTQLRQE 350
Query: 348 GWLHDRIRVVVSSFFVKV-LQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAF 406
GW+H R V+ F + L + W GMK F + LLDAD +A W ++S + + F
Sbjct: 351 GWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSINAGSWMWLSCS-SFFQQF 409
Query: 407 DRIDNPQFEGYKFDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPFP 466
P G + DPNG+Y+RR+LP L P ++I+ PWNAPE + + A +G NYP P
Sbjct: 410 FHCYCPVGFGRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNAPEGIQKVAKCLIGVNYPKP 469
Query: 467 IVRIDAAKCRLD-EALSEMWQQEAASR-----AAIE---NGTEEGLGDSSDSAP 511
+V A RL+ E + +++QQ + R A++ NG +G S+++ P
Sbjct: 470 MVN-HAEASRLNIERMKQIYQQLSRYRGLGLLASVPSNPNGNGGFMGYSAENIP 522
>RGD|735083 [details] [associations]
symbol:Cry1 "cryptochrome 1 (photolyase-like)" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000988 "protein
binding transcription factor activity" evidence=IEA;ISO]
[GO:0003690 "double-stranded DNA binding" evidence=IEA;ISO]
[GO:0003913 "DNA photolyase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007623 "circadian rhythm" evidence=IEA;ISO] [GO:0009881
"photoreceptor activity" evidence=IEA] [GO:0018298
"protein-chromophore linkage" evidence=IEA] [GO:0019901 "protein
kinase binding" evidence=IEA;ISO] [GO:0019902 "phosphatase binding"
evidence=ISO] [GO:0042752 "regulation of circadian rhythm"
evidence=ISO;ISS] [GO:0003904 "deoxyribodipyrimidine photo-lyase
activity" evidence=ISO] [GO:0003914 "DNA (6-4) photolyase activity"
evidence=ISO] InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 RGD:735083 GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 GO:GO:0000166 GO:GO:0006281
GO:GO:0006351 GO:GO:0042752 GO:GO:0048511 GO:GO:0009881
GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
HOGENOM:HOG000245622 KO:K02295 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 PROSITE:PS51645 CTD:1407 HOVERGEN:HBG053470
GeneTree:ENSGT00500000044813 EMBL:AF545855 EMBL:BC107677
IPI:IPI00395230 RefSeq:NP_942045.2 UniGene:Rn.43646
ProteinModelPortal:Q32Q86 STRING:Q32Q86 PhosphoSite:Q32Q86
PRIDE:Q32Q86 Ensembl:ENSRNOT00000009124 GeneID:299691
KEGG:rno:299691 UCSC:RGD:735083 NextBio:645641 ArrayExpress:Q32Q86
Genevestigator:Q32Q86 GermOnline:ENSRNOG00000006622 Uniprot:Q32Q86
Length = 588
Score = 363 (132.8 bits), Expect = 7.8e-31, P = 7.8e-31
Identities = 134/502 (26%), Positives = 219/502 (43%)
Query: 7 SIVWFRRDLRVEDNPXXXXXXXXXXXXX-XFIWAPEEEGPYYPGRVSRW-WXXXXXXXXX 64
++ WFR+ LR+ DNP +I P G G ++RW +
Sbjct: 5 AVHWFRKGLRLHDNPALKECIQGADTIRCVYILDPWFAGSSNVG-INRWRFLLQCLEDLD 63
Query: 65 XXXXXXGTSLVTKRSTDSVSSLLEVVKATGATQLFFNHLYDPLSLVRDHRAKEALTAQGI 124
+ L R + + K T+L + +P RD K+ T G+
Sbjct: 64 ANLRKLNSRLFVIRGQPA-DVFPRLFKEWNITKLSIEYDSEPFGKERDAAIKKLATEAGV 122
Query: 125 AVRSFNADLLYEPWDVNDAQG-QPFATFAAFWEKCLSMPFDPDAPLLPPKRINSGDMSRC 183
V + LY+ + + G QP T+ F + L +P +P I S + +C
Sbjct: 123 EVIVRISHTLYDLDKIIELNGGQPPLTYKRF--QTLVSKMEPLE--MPADTITSDVIGKC 178
Query: 184 PSDTLVFEDES-------EKG--SNALLARAWSPGWSNADKALTTFINGP--LIEYSKNR 232
+ DE E G ++ L + W G + A L + + + + R
Sbjct: 179 TTPLSDDHDEKYGVPSLEELGFDTDGLSSAVWPGGETEALTRLERHLERKAWVANFERPR 238
Query: 233 RKADS--ATTSFLSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLR 290
A+S A+ + LSP+L FG +S R +F+ K + K ++L+ + + R
Sbjct: 239 MNANSLLASPTGLSPYLRFGCLSCR-LFYF---KLTDLYKKVKKNSSPPLSLYGQLLW-R 293
Query: 291 EYSRYMSFNHPYSHE---RPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWAT 347
E+ + N+P + P+ + W + W +GRTG+P +DA M +L
Sbjct: 294 EFFYTAATNNPRFDKMEGNPICVQIP---WDKNPEALAKWAEGRTGFPWIDAIMTQLRQE 350
Query: 348 GWLHDRIRVVVSSFFVKV-LQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAF 406
GW+H R V+ F + L + W GMK F + LLDAD +A W ++S + + F
Sbjct: 351 GWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSINAGSWMWLSCS-SFFQQF 409
Query: 407 DRIDNPQFEGYKFDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPFP 466
P G + DPNG+Y+RR+LP L P ++I+ PWNAPE + + A +G NYP P
Sbjct: 410 FHCYCPVGFGRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNAPEGIQKVAKCLIGVNYPKP 469
Query: 467 IVRIDAAKCRLD-EALSEMWQQ 487
+V A RL+ E + +++QQ
Sbjct: 470 MVN-HAEASRLNIERMKQIYQQ 490
>UNIPROTKB|Q32Q86 [details] [associations]
symbol:Cry1 "Cryptochrome-1" species:10116 "Rattus
norvegicus" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 PROSITE:PS00394 InterPro:IPR006050 Pfam:PF00875
RGD:735083 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0000166
GO:GO:0006281 GO:GO:0006351 GO:GO:0042752 GO:GO:0048511
GO:GO:0009881 GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729
eggNOG:COG0415 HOGENOM:HOG000245622 KO:K02295 GO:GO:0003913
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 CTD:1407
HOVERGEN:HBG053470 GeneTree:ENSGT00500000044813 EMBL:AF545855
EMBL:BC107677 IPI:IPI00395230 RefSeq:NP_942045.2 UniGene:Rn.43646
ProteinModelPortal:Q32Q86 STRING:Q32Q86 PhosphoSite:Q32Q86
PRIDE:Q32Q86 Ensembl:ENSRNOT00000009124 GeneID:299691
KEGG:rno:299691 UCSC:RGD:735083 NextBio:645641 ArrayExpress:Q32Q86
Genevestigator:Q32Q86 GermOnline:ENSRNOG00000006622 Uniprot:Q32Q86
Length = 588
Score = 363 (132.8 bits), Expect = 7.8e-31, P = 7.8e-31
Identities = 134/502 (26%), Positives = 219/502 (43%)
Query: 7 SIVWFRRDLRVEDNPXXXXXXXXXXXXX-XFIWAPEEEGPYYPGRVSRW-WXXXXXXXXX 64
++ WFR+ LR+ DNP +I P G G ++RW +
Sbjct: 5 AVHWFRKGLRLHDNPALKECIQGADTIRCVYILDPWFAGSSNVG-INRWRFLLQCLEDLD 63
Query: 65 XXXXXXGTSLVTKRSTDSVSSLLEVVKATGATQLFFNHLYDPLSLVRDHRAKEALTAQGI 124
+ L R + + K T+L + +P RD K+ T G+
Sbjct: 64 ANLRKLNSRLFVIRGQPA-DVFPRLFKEWNITKLSIEYDSEPFGKERDAAIKKLATEAGV 122
Query: 125 AVRSFNADLLYEPWDVNDAQG-QPFATFAAFWEKCLSMPFDPDAPLLPPKRINSGDMSRC 183
V + LY+ + + G QP T+ F + L +P +P I S + +C
Sbjct: 123 EVIVRISHTLYDLDKIIELNGGQPPLTYKRF--QTLVSKMEPLE--MPADTITSDVIGKC 178
Query: 184 PSDTLVFEDES-------EKG--SNALLARAWSPGWSNADKALTTFINGP--LIEYSKNR 232
+ DE E G ++ L + W G + A L + + + + R
Sbjct: 179 TTPLSDDHDEKYGVPSLEELGFDTDGLSSAVWPGGETEALTRLERHLERKAWVANFERPR 238
Query: 233 RKADS--ATTSFLSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLR 290
A+S A+ + LSP+L FG +S R +F+ K + K ++L+ + + R
Sbjct: 239 MNANSLLASPTGLSPYLRFGCLSCR-LFYF---KLTDLYKKVKKNSSPPLSLYGQLLW-R 293
Query: 291 EYSRYMSFNHPYSHE---RPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWAT 347
E+ + N+P + P+ + W + W +GRTG+P +DA M +L
Sbjct: 294 EFFYTAATNNPRFDKMEGNPICVQIP---WDKNPEALAKWAEGRTGFPWIDAIMTQLRQE 350
Query: 348 GWLHDRIRVVVSSFFVKV-LQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAF 406
GW+H R V+ F + L + W GMK F + LLDAD +A W ++S + + F
Sbjct: 351 GWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSINAGSWMWLSCS-SFFQQF 409
Query: 407 DRIDNPQFEGYKFDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPFP 466
P G + DPNG+Y+RR+LP L P ++I+ PWNAPE + + A +G NYP P
Sbjct: 410 FHCYCPVGFGRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNAPEGIQKVAKCLIGVNYPKP 469
Query: 467 IVRIDAAKCRLD-EALSEMWQQ 487
+V A RL+ E + +++QQ
Sbjct: 470 MVN-HAEASRLNIERMKQIYQQ 490
>UNIPROTKB|E2RMX4 [details] [associations]
symbol:CRY1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042752 "regulation of circadian rhythm"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0007623 "circadian rhythm" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003690 "double-stranded DNA binding" evidence=IEA] [GO:0000988
"protein binding transcription factor activity" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0003913 "DNA photolyase activity" evidence=IEA]
InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875
GO:GO:0005739 GO:GO:0005634 GO:GO:0007623 GO:GO:0006281
GO:GO:0042752 GO:GO:0000122 GO:GO:0003690 Gene3D:3.40.50.620
InterPro:IPR014729 KO:K02295 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 CTD:1407 GeneTree:ENSGT00500000044813 OMA:FDTDGLP
GO:GO:0000988 EMBL:AAEX03007373 EMBL:AAEX03007371 EMBL:AAEX03007372
RefSeq:XP_862753.1 Ensembl:ENSCAFT00000002826 GeneID:474528
KEGG:cfa:474528 Uniprot:E2RMX4
Length = 587
Score = 362 (132.5 bits), Expect = 1.0e-30, P = 1.0e-30
Identities = 134/502 (26%), Positives = 220/502 (43%)
Query: 7 SIVWFRRDLRVEDNPXXXXXXXXXXXXX-XFIWAPEEEGPYYPGRVSRW-WXXXXXXXXX 64
++ WFR+ LR+ DNP +I P G G ++RW +
Sbjct: 5 AVHWFRKGLRLHDNPALKECIQGADTIRCVYILDPWFAGSSNVG-INRWRFLLQCLEDLD 63
Query: 65 XXXXXXGTSLVTKRSTDSVSSLLEVVKATGATQLFFNHLYDPLSLVRDHRAKEALTAQGI 124
+ L R + + K T+L + +P RD K+ T G+
Sbjct: 64 ANLRKLNSRLFVIRGQPA-DVFPRLFKEWNITKLSIEYDSEPFGKERDAAIKKLATEAGV 122
Query: 125 AVRSFNADLLYEPWDVNDAQG-QPFATFAAFWEKCLSMPFDPDAPLLPPKRINSGDMSRC 183
V + LY+ + + G QP T+ F + L +P +P + I S + +C
Sbjct: 123 EVIVRISHTLYDLDKIIELNGGQPPLTYKRF--QTLISKMEPLE--IPVETITSEVVEKC 178
Query: 184 PSDTLVFEDES-------EKG--SNALLARAWSPGWSNADKALTTFINGP--LIEYSKNR 232
+ DE E G ++ L + W G + A L + + + + R
Sbjct: 179 TTPLSDDHDEKYGVPSLEELGFDTDGLPSAVWPGGETEALTRLERHLERKAWVANFERPR 238
Query: 233 RKADS--ATTSFLSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLR 290
A+S A+ + LSP+L FG +S R +F+ K + K ++L+ + + R
Sbjct: 239 MNANSLLASPTGLSPYLRFGCLSCR-LFYF---KLTDLYKKVKKNSSPPLSLYGQLLW-R 293
Query: 291 EYSRYMSFNHPYSHE---RPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWAT 347
E+ + N+P + P+ + W + W +GRTG+P +DA M +L
Sbjct: 294 EFFYTAATNNPRFDKMEGNPICVQIP---WDKNPEALAKWAEGRTGFPWIDAIMTQLRQE 350
Query: 348 GWLHDRIRVVVSSFFVKV-LQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAF 406
GW+H R V+ F + L + W GMK F + LLDAD +A W ++S + + F
Sbjct: 351 GWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSINAGSWMWLSCS-SFFQQF 409
Query: 407 DRIDNPQFEGYKFDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPFP 466
P G + DPNG+Y+RR+LP L P ++I+ PWNAPE + + A +G NYP P
Sbjct: 410 FHCYCPVGFGRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNAPEGIQKVAKCLIGVNYPKP 469
Query: 467 IVRIDAAKCRLD-EALSEMWQQ 487
+V A RL+ E + +++QQ
Sbjct: 470 MVN-HAEASRLNIERMKQIYQQ 490
>UNIPROTKB|Q70AD6 [details] [associations]
symbol:CRY1 "Cryptochrome-1" species:134510 "Nannospalax
judaei" [GO:0042752 "regulation of circadian rhythm" evidence=ISS]
InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394 InterPro:IPR006050
Pfam:PF00875 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0000166 GO:GO:0006281 GO:GO:0006351 GO:GO:0042752
GO:GO:0048511 GO:GO:0009881 GO:GO:0018298 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
PROSITE:PS51645 HOVERGEN:HBG053470 EMBL:AJ606298
ProteinModelPortal:Q70AD6 Uniprot:Q70AD6
Length = 587
Score = 362 (132.5 bits), Expect = 1.0e-30, P = 1.0e-30
Identities = 134/502 (26%), Positives = 220/502 (43%)
Query: 7 SIVWFRRDLRVEDNPXXXXXXXXXXXXX-XFIWAPEEEGPYYPGRVSRW-WXXXXXXXXX 64
++ WFR+ LR+ DNP +I P G G ++RW +
Sbjct: 5 AVHWFRKGLRLHDNPALKECIQGADTIRCVYILDPWFAGSSNVG-INRWRFLLQCLEDLD 63
Query: 65 XXXXXXGTSLVTKRSTDSVSSLLEVVKATGATQLFFNHLYDPLSLVRDHRAKEALTAQGI 124
+ L+ R + + K T+L + +P RD K+ T G+
Sbjct: 64 ANLRKLNSRLLVIRGQPA-DVFPRLFKEWNITKLSIEYDSEPFGKERDAAIKKLATEAGV 122
Query: 125 AVRSFNADLLYEPWDVNDAQG-QPFATFAAFWEKCLSMPFDPDAPLLPPKRINSGDMSRC 183
V + LY+ + + G QP T+ F + L +P +P + I S + +C
Sbjct: 123 EVIVRISHTLYDLDKIIELNGGQPPLTYKRF--QTLISKMEPLE--IPVETITSEVIEKC 178
Query: 184 PSDTLVFEDES-------EKG--SNALLARAWSPGWSNADKALTTFINGP--LIEYSKNR 232
+ DE E G ++ L + W G + A L + + + + R
Sbjct: 179 TTPLSDDHDEKYGVPSLEELGFDTDGLSSAVWPGGETEALTRLERHLERRAWVANFERPR 238
Query: 233 RKADS--ATTSFLSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLR 290
A+S A+ + LSP+L FG +S R +F+ K + K ++L+ + + R
Sbjct: 239 MNANSLLASPTGLSPYLRFGCLSCR-LFYF---KLTDLYKKVKKNSSPPLSLYGQLLW-R 293
Query: 291 EYSRYMSFNHPYSHE---RPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWAT 347
E+ + N+P + P+ + W + W +GRTG+P +DA M +L
Sbjct: 294 EFFYTAATNNPRFDKMEGNPICVQIP---WDKNPEALAKWAEGRTGFPWIDAIMTQLRQE 350
Query: 348 GWLHDRIRVVVSSFFV-KVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAF 406
GW+H R V+ F L + W GMK F + LLDAD +A W ++S + + F
Sbjct: 351 GWIHHLARHAVACFLTGSDLWISWEEGMKVFEELLLDADWSINAGSWMWLSCS-SFFQQF 409
Query: 407 DRIDNPQFEGYKFDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPFP 466
P G + DPNG+Y+RR+LP L P ++I+ PWNAPE + + A +G NYP P
Sbjct: 410 FHCYCPVGFGRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNAPEGIQKVAKCLIGVNYPKP 469
Query: 467 IVRIDAAKCRLD-EALSEMWQQ 487
+V A RL+ E + +++QQ
Sbjct: 470 MVN-HAEASRLNIERMKQIYQQ 490
>UNIPROTKB|F1NYE9 [details] [associations]
symbol:CRY1 "Cryptochrome-1" species:9031 "Gallus gallus"
[GO:0003913 "DNA photolyase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] InterPro:IPR005101 Pfam:PF03441
InterPro:IPR006050 Pfam:PF00875 GO:GO:0006281 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
IPI:IPI00577266 GeneTree:ENSGT00500000044813 EMBL:AADN02006287
EMBL:AADN02006288 EMBL:AADN02006289 Ensembl:ENSGALT00000020627
ArrayExpress:F1NYE9 Uniprot:F1NYE9
Length = 621
Score = 363 (132.8 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 137/504 (27%), Positives = 222/504 (44%)
Query: 7 SIVWFRRDLRVEDNPXXXXXXXXXXXXX-XFIWAPEEEGPYYPGRVSRW-WXXXXXXXXX 64
++ WFR+ LR+ DNP +I P G G ++RW +
Sbjct: 5 AVHWFRKGLRLHDNPALRECIRGADTVRCVYILDPWFAGSSNVG-INRWRFLLQCLEDLD 63
Query: 65 XXXXXXGTSLVTKRSTDSVSSLLEVVKATGATQLFFNHLYDPLSLVRDHRAKEALTAQGI 124
+ L R + + K +L + +P RD K+ + G+
Sbjct: 64 ANLRKLNSRLFVIRGQPA-DVFPRLFKEWSIAKLSIEYDSEPFGKERDAAIKKLASEAGV 122
Query: 125 AVRSFNADLLYEPWDVNDAQG-QPFATFAAFWEKCLSMPFDPDAPLLPPKRINSGDMSRC 183
V + LY+ + + G QP T+ F + L +P +P + I M +C
Sbjct: 123 EVIVRISHTLYDLDKIIELNGGQPPLTYKRF--QTLISRMEPLE--MPVETITPEVMQKC 178
Query: 184 PSDTLVFEDESEK---------G--SNALLARAWSPGWSNADKALTTFINGP--LIEYSK 230
T V +D EK G ++ L + W G + A L + + + +
Sbjct: 179 T--TPVSDDHDEKYGVPSLEELGFDTDGLPSAVWPGGETEALTRLERHLERKAWVANFER 236
Query: 231 NRRKADS--ATTSFLSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIG 288
R A+S A+ + LSP+L FG +S R +F+ K + K ++L+ + +
Sbjct: 237 PRMNANSLLASPTGLSPYLRFGCLSCR-LFYF---KLTDLYKKVKKNSSPPLSLYGQLLW 292
Query: 289 LREYSRYMSFNHPYSHE---RPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELW 345
RE+ + N+P + P+ + W + W +GRTG+P +DA M +L
Sbjct: 293 -REFFYTAATNNPRFDKMEGNPICVQIP---WDKNPEALAKWAEGRTGFPWIDAIMTQLR 348
Query: 346 ATGWLHDRIRVVVSSFFVKV-LQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGR 404
GW+H R V+ F + L + W GMK F + LLDAD +A W ++S + +
Sbjct: 349 QEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSVNAGSWMWLSCS-SFFQ 407
Query: 405 AFDRIDNPQFEGYKFDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYP 464
F P G + DPNG+Y+RR+LP L P ++I+ PWNAPESV +AA +G NYP
Sbjct: 408 QFFHCYCPVGFGRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNAPESVQKAAKCVIGVNYP 467
Query: 465 FPIVRIDAAKCRLD-EALSEMWQQ 487
P+V A RL+ E + +++QQ
Sbjct: 468 KPMVN-HAEASRLNIERMKQIYQQ 490
>UNIPROTKB|Q8QG61 [details] [associations]
symbol:CRY1 "Cryptochrome-1" species:9031 "Gallus gallus"
[GO:0003913 "DNA photolyase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009881 "photoreceptor activity"
evidence=IEA] [GO:0018298 "protein-chromophore linkage"
evidence=IEA] [GO:0048511 "rhythmic process" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 GO:GO:0005634 GO:GO:0005737
GO:GO:0006355 GO:GO:0000166 GO:GO:0006281 GO:GO:0006351
GO:GO:0048511 GO:GO:0009881 GO:GO:0018298 Gene3D:3.40.50.620
InterPro:IPR014729 eggNOG:COG0415 HOGENOM:HOG000245622 KO:K02295
GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645
EMBL:AY034432 IPI:IPI00577266 RefSeq:NP_989576.1 UniGene:Gga.4107
ProteinModelPortal:Q8QG61 STRING:Q8QG61 GeneID:374093
KEGG:gga:374093 CTD:1407 HOVERGEN:HBG053470 NextBio:20813612
Uniprot:Q8QG61
Length = 621
Score = 363 (132.8 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 137/504 (27%), Positives = 222/504 (44%)
Query: 7 SIVWFRRDLRVEDNPXXXXXXXXXXXXX-XFIWAPEEEGPYYPGRVSRW-WXXXXXXXXX 64
++ WFR+ LR+ DNP +I P G G ++RW +
Sbjct: 5 AVHWFRKGLRLHDNPALRECIRGADTVRCVYILDPWFAGSSNVG-INRWRFLLQCLEDLD 63
Query: 65 XXXXXXGTSLVTKRSTDSVSSLLEVVKATGATQLFFNHLYDPLSLVRDHRAKEALTAQGI 124
+ L R + + K +L + +P RD K+ + G+
Sbjct: 64 ANLRKLNSRLFVIRGQPA-DVFPRLFKEWSIAKLSIEYDSEPFGKERDAAIKKLASEAGV 122
Query: 125 AVRSFNADLLYEPWDVNDAQG-QPFATFAAFWEKCLSMPFDPDAPLLPPKRINSGDMSRC 183
V + LY+ + + G QP T+ F + L +P +P + I M +C
Sbjct: 123 EVIVRISHTLYDLDKIIELNGGQPPLTYKRF--QTLISRMEPLE--MPVETITPEVMQKC 178
Query: 184 PSDTLVFEDESEK---------G--SNALLARAWSPGWSNADKALTTFINGP--LIEYSK 230
T V +D EK G ++ L + W G + A L + + + +
Sbjct: 179 T--TPVSDDHDEKYGVPSLEELGFDTDGLPSAVWPGGETEALTRLERHLERKAWVANFER 236
Query: 231 NRRKADS--ATTSFLSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIG 288
R A+S A+ + LSP+L FG +S R +F+ K + K ++L+ + +
Sbjct: 237 PRMNANSLLASPTGLSPYLRFGCLSCR-LFYF---KLTDLYKKVKKNSSPPLSLYGQLLW 292
Query: 289 LREYSRYMSFNHPYSHE---RPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELW 345
RE+ + N+P + P+ + W + W +GRTG+P +DA M +L
Sbjct: 293 -REFFYTAATNNPRFDKMEGNPICVQIP---WDKNPEALAKWAEGRTGFPWIDAIMTQLR 348
Query: 346 ATGWLHDRIRVVVSSFFVKV-LQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGR 404
GW+H R V+ F + L + W GMK F + LLDAD +A W ++S + +
Sbjct: 349 QEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSVNAGSWMWLSCS-SFFQ 407
Query: 405 AFDRIDNPQFEGYKFDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYP 464
F P G + DPNG+Y+RR+LP L P ++I+ PWNAPESV +AA +G NYP
Sbjct: 408 QFFHCYCPVGFGRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNAPESVQKAAKCVIGVNYP 467
Query: 465 FPIVRIDAAKCRLD-EALSEMWQQ 487
P+V A RL+ E + +++QQ
Sbjct: 468 KPMVN-HAEASRLNIERMKQIYQQ 490
>UNIPROTKB|E1C2Z9 [details] [associations]
symbol:CRY1 "Cryptochrome-1" species:9031 "Gallus gallus"
[GO:0003913 "DNA photolyase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000988 "protein binding transcription factor activity"
evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0042752 "regulation of circadian rhythm" evidence=IEA]
InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875
GO:GO:0005739 GO:GO:0005634 GO:GO:0007623 GO:GO:0006281
GO:GO:0042752 GO:GO:0000122 GO:GO:0003690 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
GeneTree:ENSGT00500000044813 OMA:FDTDGLP GO:GO:0000988
EMBL:AADN02006287 EMBL:AADN02006288 EMBL:AADN02006289
IPI:IPI00821281 Ensembl:ENSGALT00000037715 ArrayExpress:E1C2Z9
Uniprot:E1C2Z9
Length = 624
Score = 363 (132.8 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 137/504 (27%), Positives = 222/504 (44%)
Query: 7 SIVWFRRDLRVEDNPXXXXXXXXXXXXX-XFIWAPEEEGPYYPGRVSRW-WXXXXXXXXX 64
++ WFR+ LR+ DNP +I P G G ++RW +
Sbjct: 5 AVHWFRKGLRLHDNPALRECIRGADTVRCVYILDPWFAGSSNVG-INRWRFLLQCLEDLD 63
Query: 65 XXXXXXGTSLVTKRSTDSVSSLLEVVKATGATQLFFNHLYDPLSLVRDHRAKEALTAQGI 124
+ L R + + K +L + +P RD K+ + G+
Sbjct: 64 ANLRKLNSRLFVIRGQPA-DVFPRLFKEWSIAKLSIEYDSEPFGKERDAAIKKLASEAGV 122
Query: 125 AVRSFNADLLYEPWDVNDAQG-QPFATFAAFWEKCLSMPFDPDAPLLPPKRINSGDMSRC 183
V + LY+ + + G QP T+ F + L +P +P + I M +C
Sbjct: 123 EVIVRISHTLYDLDKIIELNGGQPPLTYKRF--QTLISRMEPLE--MPVETITPEVMQKC 178
Query: 184 PSDTLVFEDESEK---------G--SNALLARAWSPGWSNADKALTTFINGP--LIEYSK 230
T V +D EK G ++ L + W G + A L + + + +
Sbjct: 179 T--TPVSDDHDEKYGVPSLEELGFDTDGLPSAVWPGGETEALTRLERHLERKAWVANFER 236
Query: 231 NRRKADS--ATTSFLSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIG 288
R A+S A+ + LSP+L FG +S R +F+ K + K ++L+ + +
Sbjct: 237 PRMNANSLLASPTGLSPYLRFGCLSCR-LFYF---KLTDLYKKVKKNSSPPLSLYGQLLW 292
Query: 289 LREYSRYMSFNHPYSHE---RPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELW 345
RE+ + N+P + P+ + W + W +GRTG+P +DA M +L
Sbjct: 293 -REFFYTAATNNPRFDKMEGNPICVQIP---WDKNPEALAKWAEGRTGFPWIDAIMTQLR 348
Query: 346 ATGWLHDRIRVVVSSFFVKV-LQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGR 404
GW+H R V+ F + L + W GMK F + LLDAD +A W ++S + +
Sbjct: 349 QEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSVNAGSWMWLSCS-SFFQ 407
Query: 405 AFDRIDNPQFEGYKFDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYP 464
F P G + DPNG+Y+RR+LP L P ++I+ PWNAPESV +AA +G NYP
Sbjct: 408 QFFHCYCPVGFGRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNAPESVQKAAKCVIGVNYP 467
Query: 465 FPIVRIDAAKCRLD-EALSEMWQQ 487
P+V A RL+ E + +++QQ
Sbjct: 468 KPMVN-HAEASRLNIERMKQIYQQ 490
>MGI|MGI:1270841 [details] [associations]
symbol:Cry1 "cryptochrome 1 (photolyase-like)" species:10090
"Mus musculus" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0000988 "protein binding
transcription factor activity" evidence=ISO] [GO:0003690
"double-stranded DNA binding" evidence=ISO;IDA] [GO:0003913 "DNA
photolyase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007623 "circadian
rhythm" evidence=IDA;IMP] [GO:0009881 "photoreceptor activity"
evidence=IEA] [GO:0018298 "protein-chromophore linkage"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IPI]
[GO:0019902 "phosphatase binding" evidence=ISO] [GO:0042752
"regulation of circadian rhythm" evidence=IMP] [GO:0048511
"rhythmic process" evidence=IEA] [GO:0050896 "response to stimulus"
evidence=IEA] InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 MGI:MGI:1270841 GO:GO:0005829
GO:GO:0005739 GO:GO:0005654 GO:GO:0000166 GO:GO:0007623
GO:GO:0006281 GO:GO:0006351 GO:GO:0042752 GO:GO:0000122
GO:GO:0003690 GO:GO:0009881 GO:GO:0018298 Gene3D:3.40.50.620
InterPro:IPR014729 Reactome:REACT_109335 Reactome:REACT_24972
eggNOG:COG0415 HOGENOM:HOG000245622 KO:K02295 GO:GO:0003913
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 CTD:1407
HOVERGEN:HBG053470 GeneTree:ENSGT00500000044813 OMA:FDTDGLP
OrthoDB:EOG4DBTDC GO:GO:0000988 EMBL:AB000777 EMBL:AF156986
EMBL:AK162460 EMBL:BC022174 EMBL:BC085499 IPI:IPI00129123
RefSeq:NP_031797.1 UniGene:Mm.26237 ProteinModelPortal:P97784
SMR:P97784 DIP:DIP-38515N IntAct:P97784 STRING:P97784
PhosphoSite:P97784 PRIDE:P97784 Ensembl:ENSMUST00000020227
GeneID:12952 KEGG:mmu:12952 UCSC:uc007gle.1 InParanoid:P97784
NextBio:282662 Bgee:P97784 CleanEx:MM_CRY1 Genevestigator:P97784
GermOnline:ENSMUSG00000020038 Uniprot:P97784
Length = 606
Score = 362 (132.5 bits), Expect = 1.2e-30, P = 1.2e-30
Identities = 134/502 (26%), Positives = 219/502 (43%)
Query: 7 SIVWFRRDLRVEDNPXXXXXXXXXXXXX-XFIWAPEEEGPYYPGRVSRW-WXXXXXXXXX 64
++ WFR+ LR+ DNP +I P G G ++RW +
Sbjct: 5 AVHWFRKGLRLHDNPALKECIQGADTIRCVYILDPWFAGSSNVG-INRWRFLLQCLEDLD 63
Query: 65 XXXXXXGTSLVTKRSTDSVSSLLEVVKATGATQLFFNHLYDPLSLVRDHRAKEALTAQGI 124
+ L R + + K T+L + +P RD K+ T G+
Sbjct: 64 ANLRKLNSRLFVIRGQPA-DVFPRLFKEWNITKLSIEYDSEPFGKERDAAIKKLATEAGV 122
Query: 125 AVRSFNADLLYEPWDVNDAQG-QPFATFAAFWEKCLSMPFDPDAPLLPPKRINSGDMSRC 183
V + LY+ + + G QP T+ F + L +P +P I S + +C
Sbjct: 123 EVIVRISHTLYDLDKIIELNGGQPPLTYKRF--QTLVSKMEPLE--MPADTITSDVIGKC 178
Query: 184 PSDTLVFEDES-------EKG--SNALLARAWSPGWSNADKALTTFINGP--LIEYSKNR 232
+ DE E G ++ L + W G + A L + + + + R
Sbjct: 179 MTPLSDDHDEKYGVPSLEELGFDTDGLSSAVWPGGETEALTRLERHLERKAWVANFERPR 238
Query: 233 RKADS--ATTSFLSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLR 290
A+S A+ + LSP+L FG +S R +F+ K + K ++L+ + + R
Sbjct: 239 MNANSLLASPTGLSPYLRFGCLSCR-LFYF---KLTDLYKKVKKNSSPPLSLYGQLLW-R 293
Query: 291 EYSRYMSFNHPYSHE---RPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWAT 347
E+ + N+P + P+ + W + W +GRTG+P +DA M +L
Sbjct: 294 EFFYTAATNNPRFDKMEGNPICVQIP---WDKNPEALAKWAEGRTGFPWIDAIMTQLRQE 350
Query: 348 GWLHDRIRVVVSSFFVKV-LQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAF 406
GW+H R V+ F + L + W GMK F + LLDAD +A W ++S + + F
Sbjct: 351 GWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSINAGSWMWLSCS-SFFQQF 409
Query: 407 DRIDNPQFEGYKFDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPFP 466
P G + DPNG+Y+RR+LP L P ++I+ PWNAPE + + A +G NYP P
Sbjct: 410 FHCYCPVGFGRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNAPEGIQKVAKCLIGVNYPKP 469
Query: 467 IVRIDAAKCRLD-EALSEMWQQ 487
+V A RL+ E + +++QQ
Sbjct: 470 MVN-HAEASRLNIERMKQIYQQ 490
>UNIPROTKB|Q8WP19 [details] [associations]
symbol:CRY1 "Cryptochrome-1" species:9541 "Macaca
fascicularis" [GO:0042752 "regulation of circadian rhythm"
evidence=ISS] InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 GO:GO:0005634 GO:GO:0005737
GO:GO:0006355 GO:GO:0000166 GO:GO:0006281 GO:GO:0006351
GO:GO:0042752 GO:GO:0048511 GO:GO:0009881 GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 PROSITE:PS51645 HOVERGEN:HBG053470 EMBL:AB074458
ProteinModelPortal:Q8WP19 Uniprot:Q8WP19
Length = 586
Score = 361 (132.1 bits), Expect = 1.3e-30, P = 1.3e-30
Identities = 140/534 (26%), Positives = 234/534 (43%)
Query: 7 SIVWFRRDLRVEDNPXXXXXXXXXXXXX-XFIWAPEEEGPYYPGRVSRW-WXXXXXXXXX 64
++ WFR+ LR+ DNP +I P G G ++RW +
Sbjct: 5 AVHWFRKGLRLHDNPALKECIQGADTIRCVYILDPWFAGSSNVG-INRWRFLLQCLEDLD 63
Query: 65 XXXXXXGTSLVTKRSTDSVSSLLEVVKATGATQLFFNHLYDPLSLVRDHRAKEALTAQGI 124
+ L R + + K T+L + +P RD K+ T G+
Sbjct: 64 ANLRKLNSRLFVIRGQPA-DVFPRLFKEWNITKLSIEYDSEPFGKERDAAIKKLATEAGV 122
Query: 125 AVRSFNADLLYEPWDVNDAQG-QPFATFAAFWEKCLSMPFDPDAPLLPPKRINSGDMSRC 183
V + LY+ + + G QP T+ F + L +P +P + I S + +C
Sbjct: 123 EVIVRISHTLYDLDKIIELNGGQPPLTYKRF--QTLISKMEPLE--IPVETITSEVIEKC 178
Query: 184 PSDTLVFEDES-------EKG--SNALLARAWSPGWSNADKALTTFINGP--LIEYSKNR 232
+ DE E G ++ L + W G + A L + + + + R
Sbjct: 179 TTPLSDDHDEKYGVPSLEELGFDTDGLSSAVWPGGETEALTRLERHLERKAWVANFERPR 238
Query: 233 RKADS--ATTSFLSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLR 290
A+S A+ + LSP+L FG +S R +F+ K + + ++L+ + + R
Sbjct: 239 MNANSLLASPTGLSPYLRFGCLSCR-LFYF---KLTDLYKKVKRNSSPPLSLYGQLLW-R 293
Query: 291 EYSRYMSFNHPYSHE---RPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWAT 347
E+ + N+P + P+ + W + W +GRTG+P +DA M +L
Sbjct: 294 EFFYTAATNNPRFDKMEGNPICVQIP---WDKNPEALAKWAEGRTGFPWIDAIMTQLRQE 350
Query: 348 GWLHDRIRVVVSSFFVKV-LQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAF 406
GW+H R V+ F + L + W GMK F + LLDAD +A W ++S + + F
Sbjct: 351 GWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSINAGSWMWLSCS-SFFQQF 409
Query: 407 DRIDNPQFEGYKFDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPFP 466
P G + DPNG+Y+RR+LP L P ++I+ PWNAPE + + A +G NYP P
Sbjct: 410 FHCYCPVGFGRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNAPEGIQKVAKCLIGINYPKP 469
Query: 467 IVRIDAAKCRLD-EALSEMWQQEAASR-----AAIE---NGTEEGLGDSSDSAP 511
+V A RL+ E + +++QQ + R A++ NG +G S+++ P
Sbjct: 470 MVN-HAEASRLNIERMKQIYQQLSRYRGLGLLASVPSNPNGNGGFMGYSTENIP 522
>UNIPROTKB|F1P3P5 [details] [associations]
symbol:CRY2 "Cryptochrome-2" species:9031 "Gallus gallus"
[GO:0003913 "DNA photolyase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] [GO:0042752 "regulation of circadian rhythm"
evidence=IEA] [GO:2000118 "regulation of sodium-dependent phosphate
transport" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000988 "protein binding transcription factor activity"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0006606
"protein import into nucleus" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875 GO:GO:0005739
GO:GO:0005634 GO:GO:0003684 GO:GO:0007623 GO:GO:0006281
GO:GO:0042752 GO:GO:0000122 GO:GO:0006606 GO:GO:0003697
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 GeneTree:ENSGT00500000044813 GO:GO:0000988
EMBL:AADN02033514 EMBL:AADN02033515 EMBL:AADN02033516
IPI:IPI00821771 Ensembl:ENSGALT00000013745 ArrayExpress:F1P3P5
Uniprot:F1P3P5
Length = 531
Score = 356 (130.4 bits), Expect = 2.4e-30, P = 2.4e-30
Identities = 127/445 (28%), Positives = 209/445 (46%)
Query: 91 KATGATQLFFNHLYDPLSLVRDHRAKEALTAQGIAVRSFNADLLYEPWDVNDAQG-QPFA 149
K G T+L F + +P RD + G+ V N+ LY+ + + G +P
Sbjct: 47 KEWGVTRLTFEYDSEPFGKERDAAIIKLAKEAGVEVVIENSHTLYDLDRIIELNGNKPPL 106
Query: 150 TFAAFWEKCLSMPFDPDAPLLPPKRINSGDMSRCPSDTLVFEDE-------SEKG--SNA 200
T+ F + +S + P P I S M C D D+ E G ++
Sbjct: 107 TYKRF-QAIISRM---ELPKKPVSSIVSQQMETCKVDIQENHDDVYGVPSLEELGFPTDG 162
Query: 201 LLARAWSPGWSNADKALTTFINGP--LIEYSKNRRKADS--ATTSFLSPHLHFGEVSVRK 256
L W G + A L + + Y + R A+S A+ + LSP+L FG +S R
Sbjct: 163 LAPAVWQGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLRFGCLSCRL 222
Query: 257 VF-HLVRI-KQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKF 314
+ HL + K+V + ++L+ + + RE+ + N+P +R +
Sbjct: 223 FYYHLWELYKKVK------RNSTPPLSLYGQLLW-REFFYTAATNNP-KFDRMEGNPICI 274
Query: 315 -FSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKV-LQLPWRW 372
W + W +G+TG+P +DA M +L GW+H R V+ F + L + W
Sbjct: 275 QIPWDKNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWES 334
Query: 373 GMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRIDNPQFEGYKFDPNGEYVRRWLPE 432
G++ F + LLDAD +A W ++S + + F P G + DP+G+YV+R+LP+
Sbjct: 335 GVRVFDELLLDADFSVNAGSWMWLSCSA-FFQQFFHCYCPVGFGRRTDPSGDYVKRYLPK 393
Query: 433 LARLPTEWIHHPWNAPESVLQAAGIELGSNYPFPIVRIDAAKCRLD-EALSEMWQQEAAS 491
L P+ +I+ PWNAPESV +AA +G +YP P+V A RL+ E + +++QQ +
Sbjct: 394 LKGFPSRYIYEPWNAPESVQKAAKCIIGVDYPKPMVN-HAETSRLNIERMKQIYQQLSRY 452
Query: 492 R-----AAIENGTEEGLGDSSDSAP 511
R A++ + E+ G +DSAP
Sbjct: 453 RGLCLLASVPSCVEDLSGPVTDSAP 477
>UNIPROTKB|F1NX44 [details] [associations]
symbol:CRY2 "Cryptochrome-2" species:9031 "Gallus gallus"
[GO:0003913 "DNA photolyase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] InterPro:IPR005101 Pfam:PF03441
InterPro:IPR006050 Pfam:PF00875 GO:GO:0005739 GO:GO:0005634
GO:GO:0003684 GO:GO:0007623 GO:GO:0006281 GO:GO:0042752
GO:GO:0000122 GO:GO:0006606 GO:GO:0003697 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
GeneTree:ENSGT00500000044813 GO:GO:0000988 IPI:IPI00572393
OMA:DIQENHD EMBL:AADN02033514 EMBL:AADN02033515 EMBL:AADN02033516
Ensembl:ENSGALT00000038345 ArrayExpress:F1NX44 Uniprot:F1NX44
Length = 537
Score = 356 (130.4 bits), Expect = 2.7e-30, P = 2.7e-30
Identities = 127/445 (28%), Positives = 209/445 (46%)
Query: 91 KATGATQLFFNHLYDPLSLVRDHRAKEALTAQGIAVRSFNADLLYEPWDVNDAQG-QPFA 149
K G T+L F + +P RD + G+ V N+ LY+ + + G +P
Sbjct: 53 KEWGVTRLTFEYDSEPFGKERDAAIIKLAKEAGVEVVIENSHTLYDLDRIIELNGNKPPL 112
Query: 150 TFAAFWEKCLSMPFDPDAPLLPPKRINSGDMSRCPSDTLVFEDE-------SEKG--SNA 200
T+ F + +S + P P I S M C D D+ E G ++
Sbjct: 113 TYKRF-QAIISRM---ELPKKPVSSIVSQQMETCKVDIQENHDDVYGVPSLEELGFPTDG 168
Query: 201 LLARAWSPGWSNADKALTTFINGP--LIEYSKNRRKADS--ATTSFLSPHLHFGEVSVRK 256
L W G + A L + + Y + R A+S A+ + LSP+L FG +S R
Sbjct: 169 LAPAVWQGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLRFGCLSCRL 228
Query: 257 VF-HLVRI-KQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKF 314
+ HL + K+V + ++L+ + + RE+ + N+P +R +
Sbjct: 229 FYYHLWELYKKVK------RNSTPPLSLYGQLLW-REFFYTAATNNP-KFDRMEGNPICI 280
Query: 315 -FSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKV-LQLPWRW 372
W + W +G+TG+P +DA M +L GW+H R V+ F + L + W
Sbjct: 281 QIPWDKNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWES 340
Query: 373 GMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRIDNPQFEGYKFDPNGEYVRRWLPE 432
G++ F + LLDAD +A W ++S + + F P G + DP+G+YV+R+LP+
Sbjct: 341 GVRVFDELLLDADFSVNAGSWMWLSCSA-FFQQFFHCYCPVGFGRRTDPSGDYVKRYLPK 399
Query: 433 LARLPTEWIHHPWNAPESVLQAAGIELGSNYPFPIVRIDAAKCRLD-EALSEMWQQEAAS 491
L P+ +I+ PWNAPESV +AA +G +YP P+V A RL+ E + +++QQ +
Sbjct: 400 LKGFPSRYIYEPWNAPESVQKAAKCIIGVDYPKPMVN-HAETSRLNIERMKQIYQQLSRY 458
Query: 492 R-----AAIENGTEEGLGDSSDSAP 511
R A++ + E+ G +DSAP
Sbjct: 459 RGLCLLASVPSCVEDLSGPVTDSAP 483
>ZFIN|ZDB-GENE-010426-6 [details] [associations]
symbol:cry3 "cryptochrome 3" species:7955 "Danio
rerio" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0009266 "response
to temperature stimulus" evidence=IDA] [GO:0009416 "response to
light stimulus" evidence=IDA] InterPro:IPR005101 Pfam:PF03441
InterPro:IPR006050 Pfam:PF00875 ZFIN:ZDB-GENE-010426-6
GO:GO:0045892 GO:GO:0006281 GO:GO:0005667 GO:GO:0009416
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0009266 GO:GO:0003913
SUPFAM:SSF52425 SUPFAM:SSF48173 HOVERGEN:HBG053470 EMBL:AB042252
IPI:IPI00508328 UniGene:Dr.130308 ProteinModelPortal:Q9I913
STRING:Q9I913 InParanoid:Q9I913 ArrayExpress:Q9I913 Uniprot:Q9I913
Length = 598
Score = 358 (131.1 bits), Expect = 3.3e-30, P = 3.3e-30
Identities = 138/506 (27%), Positives = 214/506 (42%)
Query: 7 SIVWFRRDLRVEDNPXXXXXXXXXXXXX-XFIWAPEEEGPYYPGRVSRW---WXXXXXXX 62
S+ WFR+ LR+ DNP +I P G G V+RW
Sbjct: 5 SVHWFRKGLRLHDNPALQEALNGADTVRCVYILDPWFAGSANVG-VNRWRFLLESLEDLD 63
Query: 63 XXXXXXXXGTSLVTKRSTDSVSSLLEVVKATGATQLFFNHLYDPLSLVRDHRAKEALTAQ 122
S+V + TD L K T+L F + +P RD +
Sbjct: 64 TSLRKLNSRLSVVRGQPTDVFPRLF---KEWNVTRLTFEYDSEPYGKERDAAIIKMAQEY 120
Query: 123 GIAVRSFNADLLYEPWDVNDAQGQ-PFATFAAFWE--KCLSMPFDPDAPLLPPKRINSGD 179
G+ N+ LY P + + P TF F L +P P LP I
Sbjct: 121 GVETVVRNSHTLYNPDRIIEMNNHSPPLTFKRFQAIVNRLELPRKP----LPT--ITQEQ 174
Query: 180 MSRCPSDTLVFEDE-------SEKG--SNALLARAWSPGWSNADKALTTFINGP--LIEY 228
M+RC + DE E G + W G + A + L ++ + +
Sbjct: 175 MARCRTQISDNHDEHYGVPSLEELGFRTQGDSLHVWKGGETEALERLNKHLDRKAWVANF 234
Query: 229 SKNRRKADSATTS--FLSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKS 286
+ R S S LSP+L FG +S R ++ +R + + ++LF +
Sbjct: 235 ERPRISGQSLFPSPTGLSPYLRFGCLSCRVFYYNLRDLFMKL----RRRSSPPLSLFGQL 290
Query: 287 IGLREYSRYMSFNHP-YSHER--PLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRE 343
+ RE+ N+P + H P+ + W + W +GRTG+P +DA M +
Sbjct: 291 LW-REFFYTAGTNNPNFDHMEGNPICVQIP---WDHNPEALAKWAEGRTGFPWIDAIMTQ 346
Query: 344 LWATGWLHDRIRVVVSSFFVKV-LQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPD 402
L GW+H R V+ F + L + W GMK F + LLDAD +A W ++S +
Sbjct: 347 LRQEGWIHHLARHAVACFLTRGDLWISWESGMKVFEELLLDADWSVNAGSWMWLSCSA-F 405
Query: 403 GRAFDRIDNPQFEGYKFDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSN 462
+ F P G + DP+G+Y+RR++P+L P +I+ PWNAPESV +AA +G +
Sbjct: 406 FQQFFHCYCPVGFGRRTDPSGDYIRRYIPKLKDYPNRYIYEPWNAPESVQKAANCIVGVD 465
Query: 463 YPFPIVRIDAAKCRLD-EALSEMWQQ 487
YP P++ A RL+ E + +++QQ
Sbjct: 466 YPKPMIN-HAESSRLNIERMKQVYQQ 490
>ZFIN|ZDB-GENE-010426-7 [details] [associations]
symbol:cry4 "cryptochrome 4" species:7955 "Danio
rerio" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0009881 "photoreceptor
activity" evidence=IDA] InterPro:IPR005101 Pfam:PF03441
InterPro:IPR006050 Pfam:PF00875 ZFIN:ZDB-GENE-010426-7
GO:GO:0006281 GO:GO:0009881 Gene3D:3.40.50.620 InterPro:IPR014729
GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
GeneTree:ENSGT00500000044813 EMBL:FP085425 IPI:IPI00995476
Ensembl:ENSDART00000126053 Uniprot:E7F1Z7
Length = 582
Score = 356 (130.4 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 140/521 (26%), Positives = 230/521 (44%)
Query: 1 MSGRGCSIVWFRRDLRVEDNPXXXXXXXXXXXXXXFIWAPEE---EGPYYPGRVSRW-WX 56
MS R +I FR+ LR+ DNP ++ + +G + G + RW +
Sbjct: 22 MSHR--TIHLFRKGLRLHDNPSLLGALASSSALYP-VYVLDRVFLQGAMHMGAL-RWRFL 77
Query: 57 XXXXXXXXXXXXXXGTSL-VTKRSTDSVSSLLEVVKATGATQLFFNHLYDPLSLVRDHRA 115
G+ L V ST ++ L E+V G TQ+ ++ +P D
Sbjct: 78 LQSLEDLDTRLQAIGSRLFVLCGSTANI--LRELVAQWGITQISYDTEVEPYYTRMDKDI 135
Query: 116 KEALTAQGIAVRSFNADLLYEPWDVNDAQG-QPFATFAAFWEKCLSMPFDPDAPLLPPKR 174
+ G+ + + LY+ + A G P T+ F LS+ +P+ P +
Sbjct: 136 QTVAQENGLQTYTCVSHTLYDVKRIVKANGGSPPLTYKKFLH-VLSVLGEPEKPA---RD 191
Query: 175 INSGDMSRCPSDTLVFEDE-------SEKGSNALLARAWSPGWSNADKALTTFIN---GP 224
++ D R +++ D ++ G W G S+A + L G
Sbjct: 192 VSIEDFQRRQQQSMMDVDRVYAVPSLADLGLQVEAEVLWPGGESHALQRLEKHFQSQQGW 251
Query: 225 LIEYSKNRRKADSA--TTSFLSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNL 282
+ +SK R +S +T+ LSP+L G +SVR +H R+ + +A +S N
Sbjct: 252 VANFSKPRTIPNSLLPSTTGLSPYLSLGCLSVRTFYH--RLNSI-YA--------QSKNH 300
Query: 283 FLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFS------WVVDEGYFKAWRQGRTGYPL 336
L + L+ + F + + P ++ S W D + WR +TG+P
Sbjct: 301 SLPPVSLQGQVLWREFFYTVASATPNFTKMEGNSICLQIDWYHDPERLEKWRTAQTGFPW 360
Query: 337 VDAGMRELWATGWLHDRIRVVVSSFFVKV-LQLPWRWGMKYFWDTLLDADLESDALGWQY 395
+DA M +L GW+H R V+ F + L + W GMK F + LLDAD +A W +
Sbjct: 361 IDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEEFLLDADYSVNAGNWMW 420
Query: 396 ISGTIPDGRAFDRIDNPQFEGYKFDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAA 455
+S + + + RI P G + DP GEY+R++LP L P+++I+ PW APE V +A
Sbjct: 421 LSASAFFHK-YTRIFCPVRFGRRTDPQGEYLRKYLPVLKNFPSQYIYEPWKAPEDVQLSA 479
Query: 456 GIELGSNYPFPIV-RIDAAKCRLDEALSEMWQQEAASRAAI 495
G +G +YP PIV I+A++ L AL + E + A +
Sbjct: 480 GCIIGKDYPRPIVSHIEASQRNL--ALMRQVRTEQQTTAEL 518
>UNIPROTKB|Q17DK5 [details] [associations]
symbol:cry "Cryptochrome-1" species:7159 "Aedes aegypti"
[GO:0000060 "protein import into nucleus, translocation"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005641
"nuclear envelope lumen" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0009785 "blue light signaling pathway"
evidence=ISS] [GO:0009882 "blue light photoreceptor activity"
evidence=ISS] [GO:0042752 "regulation of circadian rhythm"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0050660 "flavin adenine
dinucleotide binding" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147
PROSITE:PS00394 InterPro:IPR006050 Pfam:PF00875 GO:GO:0005737
GO:GO:0048471 GO:GO:0045892 GO:GO:0050660 GO:GO:0006281
GO:GO:0006351 GO:GO:0005641 GO:GO:0042752 GO:GO:0048511
GO:GO:0000060 GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729
EMBL:CH477293 RefSeq:XP_001648498.1 UniGene:Aae.11304 STRING:Q17DK5
EnsemblMetazoa:AAEL004146-RA GeneID:5564182
KEGG:aag:AaeL_AAEL004146 VectorBase:AAEL004146 eggNOG:COG0415
HOGENOM:HOG000245622 KO:K02295 OMA:QMFLHTV OrthoDB:EOG437PW2
PhylomeDB:Q17DK5 GO:GO:0009882 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 PROSITE:PS51645 Uniprot:Q17DK5
Length = 545
Score = 337 (123.7 bits), Expect = 1.0e-29, Sum P(2) = 1.0e-29
Identities = 80/239 (33%), Positives = 128/239 (53%)
Query: 243 LSPHLHFGEVSVRKVFHLVR--IKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNH 300
+S L FG +SVR + V ++V N+ G + + + REY MS ++
Sbjct: 265 MSAALRFGCLSVRMFYWCVHDLYEKVQANNQYRNPGGQHIT---GQLIWREYFYTMSVHN 321
Query: 301 PYSHE---RPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVV 357
P+ E P+ ++ ++ D W++GRTG+P++DA MR+L A GWLH +R +
Sbjct: 322 PHYAEMEANPICLNIPWYEPKDDS--LDRWKEGRTGFPMIDAAMRQLLAEGWLHHILRNI 379
Query: 358 VSSFFVK-VLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRID--NPQF 414
++F + L + W G+++F LLDAD A W ++S + + + D +P
Sbjct: 380 TATFLTRGALWISWEAGVQHFLKYLLDADWSVCAGNWMWVSSSAFE-KLLDSSSCTSPIA 438
Query: 415 EGYKFDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPFPIVRIDAA 473
+ DP GEYVRR+LPEL LPT ++H PW AP V + G +G +YP P++ + AA
Sbjct: 439 LARRLDPKGEYVRRYLPELKNLPTLYVHEPWKAPLDVQKECGCIVGRDYPAPMIDLAAA 497
Score = 56 (24.8 bits), Expect = 1.0e-29, Sum P(2) = 1.0e-29
Identities = 9/15 (60%), Positives = 12/15 (80%)
Query: 7 SIVWFRRDLRVEDNP 21
+I+WFR LR+ DNP
Sbjct: 5 NILWFRHGLRLHDNP 19
>UNIPROTKB|F1SPQ5 [details] [associations]
symbol:CRY1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042752 "regulation of circadian rhythm" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003690
"double-stranded DNA binding" evidence=IEA] [GO:0000988 "protein
binding transcription factor activity" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0003913 "DNA photolyase activity" evidence=IEA]
InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875
GO:GO:0005739 GO:GO:0005634 GO:GO:0007623 GO:GO:0006281
GO:GO:0042752 GO:GO:0000122 GO:GO:0003690 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
GeneTree:ENSGT00500000044813 OMA:FDTDGLP GO:GO:0000988
EMBL:CU463085 EMBL:CU462969 Ensembl:ENSSSCT00000000173
Uniprot:F1SPQ5
Length = 589
Score = 353 (129.3 bits), Expect = 1.2e-29, P = 1.2e-29
Identities = 134/503 (26%), Positives = 220/503 (43%)
Query: 7 SIVWFRRDLRVEDNPXXXXXXXXXXXXX-XFIWAPEEEGPYYPGRVSRW-WXXXXXXXXX 64
++ WFR+ LR+ DNP +I P G G ++RW +
Sbjct: 5 AVHWFRKGLRLHDNPALKECIQGADTIRCVYILDPWFAGSSNVG-INRWRFLLQCLEDLD 63
Query: 65 XXXXXXGTSLVTKRSTDSVSSLLEVVKATGATQLFFNHLYDPLSLVRDHRAKEALTAQGI 124
+ L R + + K T+L + +P RD K+ T G+
Sbjct: 64 ANLRKLNSRLFVIRGQPA-DVFPRLFKEWNITKLSIEYDSEPFGKERDAAIKKLATEAGV 122
Query: 125 AVRSFNADLLYEPWDVNDAQG-QPFATFAAFWEKCLSMPFDPDAPLLPPKRINSGDMSRC 183
V + LY+ + + G QP T+ F + L +P +P + I S + +C
Sbjct: 123 EVIVRISHTLYDLDKIIELNGGQPPLTYKRF--QTLISKMEPLE--IPVETITSEVIEKC 178
Query: 184 PSDTLVFEDES-------EKG--SNALLARAWSPGWSNADKALTTFINGP--LIEYSKNR 232
+ DE E G ++ L + W G + A L + + + + R
Sbjct: 179 TTPLSDDHDEKYGVPSLEELGFDTDGLPSAVWPGGETEALTRLERHLERKAWVANFERPR 238
Query: 233 RKADS--ATTSFLSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLR 290
A+S A+ + LSP+L FG +S R +F+ K + K ++L+ + + R
Sbjct: 239 MNANSLLASPTGLSPYLRFGCLSCR-LFYF---KLTDLYKKVKKNSSPPLSLYGQLLW-R 293
Query: 291 EYSRYMSFNHPYSHE---RPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWAT 347
E+ + N+P + P+ + W + W +GRTG+P +DA M +L
Sbjct: 294 EFFYTAATNNPRFDKMEGNPICVQIP---WDKNPEALAKWAEGRTGFPWIDAIMTQLRQE 350
Query: 348 GWLHDRIRVVVSSFFVKV-LQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAF 406
GW+H R V+ F + L + W GMK F + LLDAD +A W ++S + + F
Sbjct: 351 GWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSINAGSWMWLSCS-SFFQQF 409
Query: 407 DRIDNPQFEGYKFDPNGEYVRR-WLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPF 465
P G + DPNG+Y+RR +LP L P ++I+ PWNAPE + + A +G NYP
Sbjct: 410 FHCYCPVGFGRRTDPNGDYIRRRYLPVLRGFPAKYIYDPWNAPEGIQKVAKCLIGVNYPK 469
Query: 466 PIVRIDAAKCRLD-EALSEMWQQ 487
P+V A RL+ E + +++QQ
Sbjct: 470 PMVN-HAEASRLNIERMKQIYQQ 491
>ZFIN|ZDB-GENE-010426-4 [details] [associations]
symbol:cry2a "cryptochrome 2a" species:7955 "Danio
rerio" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0009266 "response to
temperature stimulus" evidence=IDA] [GO:0009416 "response to light
stimulus" evidence=IDA] InterPro:IPR005101 Pfam:PF03441
InterPro:IPR006050 Pfam:PF00875 ZFIN:ZDB-GENE-010426-4
GO:GO:0006281 GO:GO:0009416 Gene3D:3.40.50.620 InterPro:IPR014729
GO:GO:0009266 EMBL:BX927144 eggNOG:COG0415 HOGENOM:HOG000245622
GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173 HOVERGEN:HBG053470
GeneTree:ENSGT00500000044813 OrthoDB:EOG4DBTDC EMBL:BX784023
IPI:IPI00501773 UniGene:Dr.116325 Ensembl:ENSDART00000100222
Uniprot:B0S7X5
Length = 659
Score = 348 (127.6 bits), Expect = 7.1e-29, P = 7.1e-29
Identities = 142/532 (26%), Positives = 228/532 (42%)
Query: 7 SIVWFRRDLRVEDNPXXXXXXXXXXXXX-XFIWAPEEEGPYYPGRVSRW-WXXXXXXXXX 64
SI WFR+ LR+ DNP + P G G V+RW +
Sbjct: 5 SIHWFRKGLRLHDNPALQEAVRGADTVRCVYFLDPWFAGSSNLG-VNRWRFLLQCLDDLD 63
Query: 65 XXXXXXGTSLVTKRSTDSVSSLLEVVKATGATQLFFNHLYDPLSLVRDHRAKEALTAQGI 124
+ L R + + + K ++L F + +P RD K+ G+
Sbjct: 64 SNLRKLNSRLFVVRGQPA-NVFPRLFKEWKISRLTFEYDSEPFGKERDAAIKKLAMEAGV 122
Query: 125 AVRSFNADLLYEPWDVNDAQG-QPFATFAAFWEKCLSMPFDPDAPLLPPKRINSGDMSRC 183
V + LY + + G QP T+ F + L DP P +P + +++ M C
Sbjct: 123 EVIVKTSHTLYNLDKIIELNGGQPPLTYKRF--QTLISRMDP--PEMPVETLSNSIMGCC 178
Query: 184 PSDTLVFEDESEK-GSNALLARAWS----PG--WSNADKALTTFINGPL------IEYSK 230
T V ED +K G +L + P W + T I L + +
Sbjct: 179 V--TPVSEDHGDKYGVPSLEELGFDIEGLPSAVWPGGETEALTRIERHLERKAWVANFER 236
Query: 231 NRRKADS--ATTSFLSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIG 288
R A+S A+ + LSP+L FG +S R +F+ K + K ++L+ + +
Sbjct: 237 PRMNANSLLASPTGLSPYLRFGCLSCR-LFYF---KLTDLYRKVKKTSTPPLSLYGQLLW 292
Query: 289 LREYSRYMSFNHPYSHE---RPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELW 345
RE+ + +P + P+ + W + W + +TG+P +DA M +L
Sbjct: 293 -REFFYTAATTNPRFDKMEGNPICVRIP---WDKNPEALAKWAEAKTGFPWIDAIMTQLR 348
Query: 346 ATGWLHDRIRVVVSSFFVKV-LQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGR 404
GW+H R V+ F + L + W GMK F + LLDAD +A W ++S + +
Sbjct: 349 QEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSVNAGSWMWLSCS-SFFQ 407
Query: 405 AFDRIDNPQFEGYKFDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYP 464
F P G + DPNG+++RR+LP L P ++I+ PWNAP+SV AA +G +YP
Sbjct: 408 QFFHCYCPVGFGRRTDPNGDFIRRYLPILRGFPAKYIYDPWNAPDSVQAAAKCIIGVHYP 467
Query: 465 FPIVRIDAAKCRLD-EALSEMWQQEAASRA----AIENGTEEGLGDSSDSAP 511
P+V A RL+ E + +++QQ + R A T G G+ +P
Sbjct: 468 KPMVN-HAEASRLNIERMKQIYQQLSRYRGLGLLASVPSTHNGNGNGMAYSP 518
>FB|FBgn0016054 [details] [associations]
symbol:phr6-4 "(6-4)-photolyase" species:7227 "Drosophila
melanogaster" [GO:0006281 "DNA repair" evidence=ISS] [GO:0003914
"DNA (6-4) photolyase activity" evidence=ISS;NAS]
InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875
EMBL:AE014134 GO:GO:0006281 Gene3D:3.40.50.620 InterPro:IPR014729
eggNOG:COG0415 KO:K02295 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 GeneTree:ENSGT00500000044813 OMA:CLSARTF
EMBL:BT044074 RefSeq:NP_477188.1 RefSeq:NP_724274.1 UniGene:Dm.7857
SMR:Q0E8P0 STRING:Q0E8P0 EnsemblMetazoa:FBtr0081404
EnsemblMetazoa:FBtr0081405 GeneID:35322 KEGG:dme:Dmel_CG2488
UCSC:CG2488-RA CTD:35322 FlyBase:FBgn0016054 InParanoid:Q0E8P0
OrthoDB:EOG49W0WG GenomeRNAi:35322 NextBio:792949 Uniprot:Q0E8P0
Length = 540
Score = 324 (119.1 bits), Expect = 3.8e-28, Sum P(2) = 3.8e-28
Identities = 114/428 (26%), Positives = 190/428 (44%)
Query: 89 VVKATGATQLFFNHLYDPLSLVRDHRAKEALTAQGIAVRSFNADLLYEPWDVNDAQ-GQP 147
+ K+ L F +P S+ RD ++ A+G+ V + + +Y P V G+
Sbjct: 96 IFKSWRVEMLTFETDIEPYSVTRDAAVQKLAKAEGVRVETHCSHTIYNPELVIAKNLGKA 155
Query: 148 FATFAAFW--------EKCLSMPFDPDAPLLPPK-RINSGDMSR--CPSDTLVFEDESEK 196
T+ F K L +P PPK + D + CP+ + + E
Sbjct: 156 PITYQKFLGIVEQLKVPKVLGVPEKLKNMPTPPKDEVEQKDSAAYDCPTMKQLVKRPEEL 215
Query: 197 GSNALLARAWSPGWSNADKALTTFINGPLIEYSKNRRKADSATTSFLSPHLHFGEVSVRK 256
G N + +++L I E + +T+ LSP+L FG +S R
Sbjct: 216 GPNKFPGGE-TEALRRMEESLKDEIWVARFEKPNTAPNSLEPSTTVLSPYLKFGCLSAR- 273
Query: 257 VFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFS 316
+F+ ++K++ K V+L + + RE+ ++ P + +R +LG++
Sbjct: 274 LFNQ-KLKEI--IKRQPKHSQPPVSL-IGQLMWREFYYTVAAAEP-NFDR-MLGNVYCMQ 327
Query: 317 --WVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKV-LQLPWRWG 373
W + +AW GRTGYP +DA MR+L GW+H R V+ F + L + W G
Sbjct: 328 IPWQEHPDHLEAWTHGRTGYPFIDAIMRQLRQEGWIHHLARHAVACFLTRGDLWISWEEG 387
Query: 374 MKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRIDNPQFEGYKFDPNGEYVRRWLPEL 433
+ F LLD D +A W ++S + + F R+ +P G K DP G Y+R+++PEL
Sbjct: 388 QRVFEQLLLDQDWALNAGNWMWLSASAFFHQYF-RVYSPVAFGKKTDPQGHYIRKYVPEL 446
Query: 434 ARLPTEWIHHPWNAPESVLQAAGIELGSNYPFPIVRIDAAKCRLDEALSEMWQQEAASRA 493
++ P I+ PW A +A G LG++YP IV+ + E + M +R
Sbjct: 447 SKYPAGCIYEPWKASLVDQRAYGCVLGTDYPHRIVKHEVVH---KENIKRMGAAYKVNRE 503
Query: 494 AIENGTEE 501
+ G EE
Sbjct: 504 -VRTGKEE 510
Score = 56 (24.8 bits), Expect = 3.8e-28, Sum P(2) = 3.8e-28
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 2 SGRGCSIVWFRRDLRVEDNP 21
S R + WFR+ LR+ DNP
Sbjct: 3 SQRSTLVHWFRKGLRLHDNP 22
>ZFIN|ZDB-GENE-010426-8 [details] [associations]
symbol:cry5 "cryptochrome 5" species:7955 "Danio
rerio" [GO:0006281 "DNA repair" evidence=IEA;IDA] [GO:0003913 "DNA
photolyase activity" evidence=IEA] [GO:0009416 "response to light
stimulus" evidence=IDA] [GO:0016829 "lyase activity" evidence=IEA]
[GO:0003914 "DNA (6-4) photolyase activity" evidence=IDA]
InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875
ZFIN:ZDB-GENE-010426-8 GO:GO:0006281 GO:GO:0009416
Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
HOGENOM:HOG000245622 SUPFAM:SSF52425 SUPFAM:SSF48173
HOVERGEN:HBG053470 GO:GO:0003914 EMBL:BC044204 IPI:IPI00634330
UniGene:Dr.82314 ProteinModelPortal:Q7ZU36 STRING:Q7ZU36
InParanoid:Q7ZU36 OrthoDB:EOG4G4GQ9 ArrayExpress:Q7ZU36
Uniprot:Q7ZU36
Length = 545
Score = 338 (124.0 bits), Expect = 4.1e-28, P = 4.1e-28
Identities = 123/478 (25%), Positives = 206/478 (43%)
Query: 7 SIVWFRRDLRVEDNPXXXXXXXXXXXXXXFIWAPEEEGPYYPGR----VSRW-WXXXXXX 61
+I WFR+ LR+ DNP P++P ++RW +
Sbjct: 31 TIHWFRKGLRLHDNPALIAALKDCRHIYPLFLLD----PWFPKNTRIGINRWRFLIEALK 86
Query: 62 XXXXXXXXXGTSLVTKRSTDSVSSLLEVVKATGATQLFFNHLYDPLSLVRDHRAKEALTA 121
+ L R + + L ++ K T+L F +P S RD +
Sbjct: 87 DLDSSLKKLNSRLFVVRGSPT-EVLPKLFKQWKITRLTFEVDTEPYSQSRDKEVMKLAKE 145
Query: 122 QGIAVRSFNADLLYE-PWDVNDAQGQPFATFAAFWE--KCLSMPFDP-DAPLLPPKRINS 177
G+ V + LY +++ G+ T+ K + P P AP R S
Sbjct: 146 YGVEVTPKISHTLYNIDRIIDENNGKTPMTYIRLQSVVKAMGHPKKPIPAPTNEDMRGVS 205
Query: 178 GDMSRCPSDTLVFEDESEKG--SNALLARAWSPGWSNADKALTTFINGP--LIEYSKNRR 233
+S + + G +++L + G A + L + + ++ K +
Sbjct: 206 TPLSDDHEEKFGIPTLEDLGLDTSSLGPHLFPGGEQEALRRLDEHMERTNWVCKFEKPKT 265
Query: 234 KADSA--TTSFLSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLRE 291
+S +T+ LSP++ FG +S R +F R+ V G D V+L + + RE
Sbjct: 266 SPNSLIPSTTVLSPYVRFGCLSAR-IFWW-RLADVY---RGKTHSDPPVSLHGQLLW-RE 319
Query: 292 YSRYMSFNHPYSHERPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLH 351
+ + P ++ W + + AWR+ RTG+P +DA M +L GW+H
Sbjct: 320 FFYTTAVGIPNFNKMEGNSACVQVDWDNNPEHLAAWREARTGFPFIDAIMTQLRQEGWIH 379
Query: 352 DRIRVVVSSFFVKV-LQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRID 410
R V+ F + L + W G K F + LLD+D +A WQ++S + + F R+
Sbjct: 380 HLARHAVACFLTRGDLWISWEEGQKVFEELLLDSDWSLNAGNWQWLSASTFFHQYF-RVY 438
Query: 411 NPQFEGYKFDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPFPIV 468
+P G K D +G+Y++++LP L + PTE+I+ PW AP SV + AG +G +YP PIV
Sbjct: 439 SPIAFGKKTDKHGDYIKKYLPVLKKFPTEYIYEPWKAPRSVQERAGCIVGKDYPRPIV 496
>ZFIN|ZDB-GENE-010426-5 [details] [associations]
symbol:cry2b "cryptochrome 2b" species:7955 "Danio
rerio" [GO:0006281 "DNA repair" evidence=IEA] [GO:0003913 "DNA
photolyase activity" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] InterPro:IPR005101
Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875 ZFIN:ZDB-GENE-010426-5
GO:GO:0045892 GO:GO:0006281 Gene3D:3.40.50.620 InterPro:IPR014729
HOGENOM:HOG000245622 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
HOVERGEN:HBG053470 EMBL:BC096780 EMBL:BC164795 IPI:IPI00498674
UniGene:Dr.31496 InParanoid:Q4V9Q3 Uniprot:Q4V9Q3
Length = 639
Score = 340 (124.7 bits), Expect = 5.2e-28, P = 5.2e-28
Identities = 143/508 (28%), Positives = 222/508 (43%)
Query: 7 SIVWFRRDLRVEDNPXXXXXXXXXXXXX-XFIWAPEEEGPYYPGRVSRW-WXXXXXXXXX 64
S+ WFR+ LR+ DNP + P G G V+RW +
Sbjct: 5 SVHWFRKGLRLHDNPALLEALNGADTLRCVYFLDPWFAGASNLG-VNRWRFLLQSLEDLD 63
Query: 65 XXXXXXGTSLVTKRSTDSVSSLLEVVKATGATQLFFNHLYDPLSLVRDHRAKEALTAQGI 124
+ L R + + K ++L F +P RD K+ G+
Sbjct: 64 ASLRKLNSCLFVIRGQPA-DIFPRLFKEWKVSRLTFEFDSEPFGKERDAAIKKLACEAGV 122
Query: 125 AVRSFNADLLYEPWDVNDAQG-QPFATFAAFWEKCLSMPFDPDAPLLPPKRINSGDMSRC 183
V + LY+ + + G Q T+ F SM PD PL P R G M +C
Sbjct: 123 EVIVKISHTLYDLDRIIELNGGQSPLTYKRFQTLVSSME-PPDPPLSSPDR---GMMGKC 178
Query: 184 PSDTLVFEDESEK-GSNAL---------LARA-WSPGWSNADKALTTFINGP--LIEYSK 230
T + E+ +K G L LA A W G S A K + + GP + + +
Sbjct: 179 V--TPISENHRDKYGVPLLEELGFDTEGLAPAVWPGGESEALKRMERHL-GPDSTVAWQE 235
Query: 231 N--RRKADS----ATTSFLSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFL 284
N R K ++ A+ LSP+L FG +S R +F+ ++ Q+ + K + S++L+
Sbjct: 236 NFERPKMNASPLMASPLGLSPYLRFGCLSCR-LFYC-KLTQLY--KKVKKNMNPSISLYD 291
Query: 285 KSIGLREYSRYMSFNHPYSHE---RPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGM 341
K + RE+ + N+P P+ + W + W + +TG+P +DA M
Sbjct: 292 KILW-REFFYTAATNNPRFDRMEGNPICIRIP---WDRNAEALAKWAEAKTGFPWIDAIM 347
Query: 342 RELWATGWLHDRIRVVVSSFFVKV-LQLPWRWGMKYFWDTLLDADLESDALGWQYISGTI 400
+L GW+H R V+ F + L + W GMK F + LLDAD +A W S +
Sbjct: 348 MQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSVNAGSWLCHSCS- 406
Query: 401 PDGRAFDRIDNPQFEGYKFDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELG 460
+ F P G + DPNG+++RR+LP L P ++I+ PWNAP V AA +G
Sbjct: 407 SFFQQFFHCYCPVGFGRRIDPNGDFIRRYLPVLRDFPAKYIYDPWNAPHDVQLAAKCVIG 466
Query: 461 SNYPFPIVRIDAAKCRLD-EALSEMWQQ 487
+YP P+V A RL+ E + +++QQ
Sbjct: 467 VDYPKPMVN-HAEASRLNIERMRQIYQQ 493
>UNIPROTKB|G4MNA0 [details] [associations]
symbol:MGG_02071 "Cryptochrome-1" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050
Pfam:PF00875 GO:GO:0006281 EMBL:CM001231 Gene3D:3.40.50.620
InterPro:IPR014729 KO:K02295 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 RefSeq:XP_003708836.1 EnsemblFungi:MGG_02071T0
GeneID:2681226 KEGG:mgr:MGG_02071 Uniprot:G4MNA0
Length = 679
Score = 284 (105.0 bits), Expect = 8.9e-28, Sum P(3) = 8.9e-28
Identities = 66/193 (34%), Positives = 110/193 (56%)
Query: 283 FLKSIGLREYSRYMSFNHPYSH--ERPLLGH-LKFFSWVVD----EGYFKAWRQGRTGYP 335
F ++ G + R++ ++ P SH + + G L+ F + VD E +F+ W G+TG+P
Sbjct: 341 FSQTAG-NAHCRFIPWHLP-SHVEDNAVSGQVLRKFEYEVDSEQAESWFRRWEAGQTGFP 398
Query: 336 LVDAGMRELWATGWLHDRIRVVVSSFFVKV-LQLPWRWGMKYFWDTLLDADLESDALGWQ 394
+DA MR+L GW+H R V+ F + + W G+ F + LLD + +A WQ
Sbjct: 399 WIDALMRQLRVEGWIHHLGRHSVACFLTRGGCYVSWERGLDVFEELLLDHEPACNAGNWQ 458
Query: 395 YISGTIPDGRAFDRIDNPQFEGYKFDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQA 454
++S T + F R +P G K+DP+G ++R+W+PELA L ++I+ PW APE+ L+
Sbjct: 459 WLSCTAFFSQYF-RCYSPISFGKKWDPDGTFIRKWVPELASLDKKYIYEPWKAPEAELRR 517
Query: 455 AGIELGSNYPFPI 467
AG+ + S + F +
Sbjct: 518 AGVVMVSGHDFGV 530
Score = 73 (30.8 bits), Expect = 8.9e-28, Sum P(3) = 8.9e-28
Identities = 16/38 (42%), Positives = 23/38 (60%)
Query: 239 TTSFLSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAG 276
+T+ LSP +HFG +SVR +H V+ V N+ K G
Sbjct: 276 STTLLSPAMHFGSLSVRLFYHRVQ-DTVDAYNQAKKKG 312
Score = 71 (30.1 bits), Expect = 8.9e-28, Sum P(3) = 8.9e-28
Identities = 43/181 (23%), Positives = 64/181 (35%)
Query: 8 IVWFRRDLRVEDNPXXXXXXXXXXXXX--XFIWAPEEEGPYYP-GRVSRWWXXXXXXXXX 64
I WFR DLR+ D+P F W P Y G ++RW
Sbjct: 7 IYWFRTDLRLHDSPALQAALDLDPAVLWPIFTWDPHYV--YRSRGGLNRWQYLLDCQNDL 64
Query: 65 XXXXXX---GTSLVTKRSTDSVSSLLEVVKATGATQLFFNHLYDPLSLVRDHRAKEALTA 121
+ L R S ++ KA T L F D + RD K+A A
Sbjct: 65 SASITNLNPRSKLFVLREAPQ-SLFPKLFKAWKVTHLVFEKDTDAYARQRDEVVKKAAQA 123
Query: 122 QGIAVRSFNADLLYEPWDVNDAQG-QPFATFAAFWEKCLSMPFDPDAPLLPPKRI-NSGD 179
G+ V + L++ + A G +P + A + P P+ PK + + G+
Sbjct: 124 AGVKVITRYGRTLWDSDAIVKANGGEPTMSMARLRTVGAKVGSIP-RPIPAPKALPDPGE 182
Query: 180 M 180
M
Sbjct: 183 M 183
>UNIPROTKB|B0WRR9 [details] [associations]
symbol:cry "Cryptochrome-1" species:7176 "Culex
quinquefasciatus" [GO:0000060 "protein import into nucleus,
translocation" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005641 "nuclear envelope lumen" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0009785 "blue light signaling
pathway" evidence=ISS] [GO:0009882 "blue light photoreceptor
activity" evidence=ISS] [GO:0042752 "regulation of circadian
rhythm" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147
PROSITE:PS00394 GO:GO:0005737 GO:GO:0048471 GO:GO:0045892
GO:GO:0050660 GO:GO:0006281 GO:GO:0006351 GO:GO:0005641
GO:GO:0042752 GO:GO:0048511 GO:GO:0000060 GO:GO:0018298
eggNOG:COG0415 KO:K02295 OrthoDB:EOG437PW2 GO:GO:0009882
GO:GO:0003913 SUPFAM:SSF48173 EMBL:DS232059 RefSeq:XP_001851403.1
UniGene:Cpi.12243 EnsemblMetazoa:CPIJ009455-RA GeneID:6042266
KEGG:cqu:CpipJ_CPIJ009455 VectorBase:CPIJ009455 PhylomeDB:B0WRR9
Uniprot:B0WRR9
Length = 499
Score = 328 (120.5 bits), Expect = 3.3e-27, P = 3.3e-27
Identities = 79/251 (31%), Positives = 131/251 (52%)
Query: 238 ATTSFLSPHLHFGEVSVRKVFHLVR--IKQVSWANEGNKAGDESVNLFLKSIGLREYSRY 295
A S +S L FG +SVR + V +V N+ G + + REY
Sbjct: 214 APPSSMSAALRFGCLSVRMFYWCVHDLFARVQANNQLKHPGGHHIT---GQLIWREYFYT 270
Query: 296 MSFNHPY---SHERPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHD 352
MS ++P+ P+ ++ ++ D+ + W++GRTG+PL+DA MR+L A GWLH
Sbjct: 271 MSVHNPHYAVMELNPICLNIPWYE-AKDDSLDR-WKEGRTGFPLIDAAMRQLMAEGWLHH 328
Query: 353 RIRVVVSSFFVKV-LQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRID- 410
+R + ++F + L + W G+++F LLDAD A W ++S + + + D
Sbjct: 329 ILRNITATFLTRGGLWISWEAGVQHFLKYLLDADWSVCAGNWMWVSSSAFE-KLLDSSSC 387
Query: 411 -NPQFEGYKFDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPFPIVR 469
+P + DP GEYV+R+LPEL + P ++H PW AP + + G +G +YP P+V
Sbjct: 388 TSPVALARRLDPKGEYVKRYLPELEKFPALYVHEPWKAPPELQEQYGCVIGKDYPAPMVN 447
Query: 470 I-DAAKCRLDE 479
+ + KC ++
Sbjct: 448 LAEVNKCNANK 458
>UNIPROTKB|Q293P8 [details] [associations]
symbol:cry "Cryptochrome-1" species:46245 "Drosophila
pseudoobscura pseudoobscura" [GO:0000060 "protein import into
nucleus, translocation" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005641 "nuclear envelope lumen" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0009785 "blue light
signaling pathway" evidence=ISS] [GO:0009882 "blue light
photoreceptor activity" evidence=ISS] [GO:0042752 "regulation of
circadian rhythm" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 GO:GO:0005737 GO:GO:0048471
GO:GO:0045892 GO:GO:0050660 GO:GO:0006281 GO:GO:0006351
GO:GO:0005641 GO:GO:0042752 GO:GO:0048511 GO:GO:0000060
EMBL:CM000070 GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729
GenomeReviews:CM000070_GR eggNOG:COG0415 KO:K02295
OrthoDB:EOG437PW2 GO:GO:0009882 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 PROSITE:PS51645 RefSeq:XP_001360014.2
GeneID:4803241 KEGG:dpo:Dpse_GA17677 FlyBase:FBgn0077687
InParanoid:Q293P8 Uniprot:Q293P8
Length = 540
Score = 300 (110.7 bits), Expect = 2.2e-26, Sum P(2) = 2.2e-26
Identities = 82/240 (34%), Positives = 118/240 (49%)
Query: 243 LSPHLHFGEVSVRKVFHLVR--IKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNH 300
+S HL FG +SVR+ + V + V A E + REY MS N+
Sbjct: 266 MSAHLRFGCLSVRRFYWSVHDLFENVQLAACVRGVQIEGGAHITGQLIWREYFYTMSVNN 325
Query: 301 PYSHERPLLGHLKF-FSWVV-DEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVV 358
P +++R + W DE + WR G+TG+PL+D MR+L A GWLH +R V
Sbjct: 326 P-NYDRMEGNEICLTIPWAKPDENLLQRWRLGQTGFPLIDGAMRQLLAEGWLHHTLRNTV 384
Query: 359 SSFFVKV-LQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDR--IDNPQFE 415
++F + L W G+K+F LLDAD A W ++S + + R D + P
Sbjct: 385 ATFLTRGGLWQSWEPGLKHFLKYLLDADWSVCAGNWMWVSSSAFE-RLLDSSLVTCPVAL 443
Query: 416 GYKFDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIE--LGSNYPFPIVRIDAA 473
+ DP G Y+RR++PEL LP E+IH PW S Q E +G +YP I+ + A
Sbjct: 444 AKRLDPEGVYIRRYVPELKNLPKEYIHEPWRL--SAEQQVKFECLIGVHYPERIIDLSKA 501
Score = 67 (28.6 bits), Expect = 2.2e-26, Sum P(2) = 2.2e-26
Identities = 11/21 (52%), Positives = 15/21 (71%)
Query: 1 MSGRGCSIVWFRRDLRVEDNP 21
M RG +++WFR LR+ DNP
Sbjct: 1 MVPRGANVLWFRHGLRLHDNP 21
>UNIPROTKB|Q7PYI7 [details] [associations]
symbol:Cry1 "Cryptochrome-1" species:7165 "Anopheles
gambiae" [GO:0000060 "protein import into nucleus, translocation"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005641
"nuclear envelope lumen" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0009785 "blue light signaling pathway"
evidence=ISS] [GO:0009882 "blue light photoreceptor activity"
evidence=ISS] [GO:0042752 "regulation of circadian rhythm"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0050660 "flavin adenine
dinucleotide binding" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147
PROSITE:PS00394 InterPro:IPR006050 Pfam:PF00875 GO:GO:0005737
GO:GO:0048471 GO:GO:0045892 GO:GO:0050660 GO:GO:0006281
GO:GO:0006351 GO:GO:0005641 GO:GO:0042752 GO:GO:0048511
GO:GO:0000060 EMBL:AAAB01008987 GO:GO:0018298 Gene3D:3.40.50.620
InterPro:IPR014729 eggNOG:COG0415 HOGENOM:HOG000245622 KO:K02295
OMA:QMFLHTV OrthoDB:EOG437PW2 GO:GO:0009882 GO:GO:0003913
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 EMBL:DQ219482
RefSeq:XP_321104.4 ProteinModelPortal:Q7PYI7 STRING:Q7PYI7
EnsemblMetazoa:AGAP001958-RA GeneID:1281165
KEGG:aga:AgaP_AGAP001958 VectorBase:AGAP001958 CTD:1281165
InParanoid:Q0QW08 PhylomeDB:Q7PYI7 Uniprot:Q7PYI7
Length = 545
Score = 303 (111.7 bits), Expect = 1.5e-25, Sum P(2) = 1.5e-25
Identities = 74/234 (31%), Positives = 119/234 (50%)
Query: 243 LSPHLHFGEVSVRKVFHLVR--IKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNH 300
+S L FG +SVR + V +V ++ G + + REY MS +
Sbjct: 266 MSAALRFGCLSVRMFYWCVHDLFAKVQSNSQFKYPGGHHIT---GQLIWREYFYTMSVQN 322
Query: 301 PYSHE---RPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVV 357
P+ E P+ ++ ++ ++ W++GRTG+P++DA MR+L A GWLH +R +
Sbjct: 323 PHYGEMERNPICLNIPWYK--PEDDSLTRWKEGRTGFPMIDAAMRQLLAEGWLHHILRNI 380
Query: 358 VSSFFVKV-LQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFD--RIDNPQF 414
++F + L L W G+++F LLDAD A W ++S + + R D + P
Sbjct: 381 TATFLTRGGLWLSWEEGLQHFLKYLLDADWSVCAGNWMWVSSSAFE-RLLDSSKCTCPIA 439
Query: 415 EGYKFDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPFPIV 468
+ DP G+YV+R+LPELA P +++H PW A G +G YP P+V
Sbjct: 440 LARRLDPKGDYVKRYLPELANYPAQFVHEPWKASREQQIEYGCVIGEKYPAPMV 493
Score = 56 (24.8 bits), Expect = 1.5e-25, Sum P(2) = 1.5e-25
Identities = 9/15 (60%), Positives = 12/15 (80%)
Query: 7 SIVWFRRDLRVEDNP 21
+I+WFR LR+ DNP
Sbjct: 5 NILWFRHGLRLHDNP 19
>ZFIN|ZDB-GENE-040617-2 [details] [associations]
symbol:cry-dash "cryptochrome DASH" species:7955
"Danio rerio" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0003684 "damaged DNA
binding" evidence=IDA] [GO:0050660 "flavin adenine dinucleotide
binding" evidence=IDA] [GO:0000719 "photoreactive repair"
evidence=IDA] [GO:0003904 "deoxyribodipyrimidine photo-lyase
activity" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0018298
"protein-chromophore linkage" evidence=IEA] InterPro:IPR002081
InterPro:IPR005101 Pfam:PF03441 PRINTS:PR00147 InterPro:IPR006050
Pfam:PF00875 ZFIN:ZDB-GENE-040617-2 GO:GO:0050660 GO:GO:0003684
GO:GO:0000719 Gene3D:3.40.50.620 InterPro:IPR014729 SUPFAM:SSF52425
SUPFAM:SSF48173 GeneTree:ENSGT00500000044813 GO:GO:0003904
InterPro:IPR014133 TIGRFAMs:TIGR02765 EMBL:BX247944 IPI:IPI00495554
Ensembl:ENSDART00000139329 ArrayExpress:F1R5N7 Bgee:F1R5N7
Uniprot:F1R5N7
Length = 521
Score = 316 (116.3 bits), Expect = 2.5e-25, Sum P(2) = 2.5e-25
Identities = 81/232 (34%), Positives = 121/232 (52%)
Query: 239 TTSFLSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSF 298
+T F SP L G +S R ++ +IK+ E + ++S + + R+Y ++++
Sbjct: 253 STKF-SPWLALGCISPRYIYE--QIKKY----EVERTANQSTYWVIFELLWRDYFKFVAL 305
Query: 299 NHPYSHERPLLGHL--KFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRV 356
Y + + L K W D F AW++GRTG P VDA MREL TG++ +R R
Sbjct: 306 K--YGNRIFYMNGLQDKHVPWNTDMKMFDAWKEGRTGVPFVDANMRELALTGFMSNRGRQ 363
Query: 357 VVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRIDNPQFEG 416
V+SF K L L WR G ++F L+D D+ S+ W Y +G D R +R N +G
Sbjct: 364 NVASFLTKDLGLDWRLGAEWFEYLLVDHDVCSNYGNWLYSAGIGNDPRE-NRKFNMIKQG 422
Query: 417 YKFDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPFPIV 468
+D NG+YVR+W+PEL + +H PW S L A + L YP PI+
Sbjct: 423 LDYDNNGDYVRQWVPELRGIKGGDVHTPWTLSNSALSHAQVSLNQTYPCPII 474
Score = 37 (18.1 bits), Expect = 2.5e-25, Sum P(2) = 2.5e-25
Identities = 9/20 (45%), Positives = 10/20 (50%)
Query: 1 MSGRGCSIVWFRRDLRVEDN 20
MS I R DLR+ DN
Sbjct: 2 MSASRTVICLLRNDLRLHDN 21
>FB|FBgn0025680 [details] [associations]
symbol:cry "cryptochrome" species:7227 "Drosophila
melanogaster" [GO:0007623 "circadian rhythm"
evidence=IGI;IEP;IMP;NAS;TAS;IPI] [GO:0009882 "blue light
photoreceptor activity" evidence=IMP] [GO:0003913 "DNA photolyase
activity" evidence=ISS;IMP] [GO:0009785 "blue light signaling
pathway" evidence=IMP] [GO:0050660 "flavin adenine dinucleotide
binding" evidence=IMP;IDA] [GO:0008020 "G-protein coupled
photoreceptor activity" evidence=ISS] [GO:0009588 "UV-A, blue light
phototransduction" evidence=ISS] [GO:0009881 "photoreceptor
activity" evidence=IMP;NAS;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0043234 "protein complex"
evidence=IPI] [GO:0005641 "nuclear envelope lumen" evidence=IDA]
[GO:0000060 "protein import into nucleus, translocation"
evidence=IMP] [GO:0009416 "response to light stimulus"
evidence=IMP;TAS] [GO:0009649 "entrainment of circadian clock"
evidence=IDA;IMP] [GO:0042332 "gravitaxis" evidence=IMP]
[GO:0009637 "response to blue light" evidence=NAS;TAS] [GO:0006281
"DNA repair" evidence=IEA] [GO:0043153 "entrainment of circadian
clock by photoperiod" evidence=IMP] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0042752 "regulation of circadian rhythm" evidence=IMP;IDA]
[GO:0045475 "locomotor rhythm" evidence=IMP] [GO:0007602
"phototransduction" evidence=IMP] [GO:0050980 "detection of light
stimulus involved in magnetoreception" evidence=IMP] [GO:0071000
"response to magnetism" evidence=IMP] [GO:0050958
"magnetoreception" evidence=IMP] InterPro:IPR002081
InterPro:IPR005101 Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 EMBL:AE014297 GO:GO:0005737
GO:GO:0048471 GO:GO:0045892 GO:GO:0043234 GO:GO:0050660
GO:GO:0006281 GO:GO:0006351 GO:GO:0005641 GO:GO:0000060
GO:GO:0045475 GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729
GO:GO:0007602 GO:GO:0043153 eggNOG:COG0415 KO:K02295 OMA:QMFLHTV
OrthoDB:EOG437PW2 GO:GO:0009882 SUPFAM:SSF52425 SUPFAM:SSF48173
PROSITE:PS51645 EMBL:AF099734 EMBL:AB018400 EMBL:AB019389
EMBL:AY051514 RefSeq:NP_732407.1 UniGene:Dm.4579 PDB:4GU5
PDBsum:4GU5 ProteinModelPortal:O77059 SMR:O77059 DIP:DIP-29424N
IntAct:O77059 MINT:MINT-1328097 STRING:O77059 PaxDb:O77059
PRIDE:O77059 EnsemblMetazoa:FBtr0083736 GeneID:42305
KEGG:dme:Dmel_CG3772 UCSC:CG3772-RA FlyBase:FBgn0025680
GeneTree:ENSGT00500000044813 InParanoid:O77059 PhylomeDB:O77059
GenomeRNAi:42305 NextBio:828142 Bgee:O77059 GO:GO:0050980
GO:GO:0042332 GO:GO:0071000 Uniprot:O77059
Length = 542
Score = 285 (105.4 bits), Expect = 4.0e-25, Sum P(2) = 4.0e-25
Identities = 76/242 (31%), Positives = 124/242 (51%)
Query: 243 LSPHLHFGEVSVRKVF---H-LVRIKQVSWANEG-NKAGDESVNLFLKSIGLREYSRYMS 297
+S HL FG +SVR+ + H L + Q+ G G + + REY MS
Sbjct: 266 MSAHLRFGCLSVRRFYWSVHDLFKNVQLRACVRGVQMTGGAHIT---GQLIWREYFYTMS 322
Query: 298 FNHPYSHERPLLGHLKFFS--WVV-DEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRI 354
N+P +++R + G+ S W +E ++WR G+TG+PL+D MR+L A GWLH +
Sbjct: 323 VNNP-NYDR-MEGNDICLSIPWAKPNENLLQSWRLGQTGFPLIDGAMRQLLAEGWLHHTL 380
Query: 355 RVVVSSFFVKV-LQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDR--IDN 411
R V++F + L W G+++F LLDAD A W ++S + + R D +
Sbjct: 381 RNTVATFLTRGGLWQSWEHGLQHFLKYLLDADWSVCAGNWMWVSSSAFE-RLLDSSLVTC 439
Query: 412 PQFEGYKFDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPFPIVRID 471
P + DP+G Y+++++PEL +P E++H PW + +G +YP I+ +
Sbjct: 440 PVALAKRLDPDGTYIKQYVPELMNVPKEFVHEPWRMSAEQQEQYECLIGVHYPERIIDLS 499
Query: 472 AA 473
A
Sbjct: 500 MA 501
Score = 72 (30.4 bits), Expect = 4.0e-25, Sum P(2) = 4.0e-25
Identities = 11/21 (52%), Positives = 16/21 (76%)
Query: 1 MSGRGCSIVWFRRDLRVEDNP 21
M+ RG +++WFR LR+ DNP
Sbjct: 1 MATRGANVIWFRHGLRLHDNP 21
>UNIPROTKB|Q2TV23 [details] [associations]
symbol:LOC395100 "Cryptochrome-like protein" species:9031
"Gallus gallus" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875 GO:GO:0006281
Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
HOGENOM:HOG000245622 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
HOVERGEN:HBG053470 GeneTree:ENSGT00500000044813 EMBL:AADN02063941
EMBL:AY300013 IPI:IPI00782853 RefSeq:NP_001034685.1
UniGene:Gga.5544 Ensembl:ENSGALT00000000143 GeneID:395100
KEGG:gga:395100 InParanoid:Q2TV23 OrthoDB:EOG479F6W
NextBio:20815193 Uniprot:Q2TV23
Length = 529
Score = 290 (107.1 bits), Expect = 1.5e-22, Sum P(2) = 1.5e-22
Identities = 98/360 (27%), Positives = 159/360 (44%)
Query: 123 GIAVRSFNADLLYEPWDVNDAQG-QPFATFAAFWEKCLSMPFDPDAPLLPPKRINSGDMS 181
G V S LY + + G P T+ F + LS+ DP+ P+ P + D
Sbjct: 122 GFQVLSLMGHSLYNTQRILELNGGTPPLTYKRFL-RILSLLGDPEVPVRNP---TAEDFQ 177
Query: 182 RC-PSDTLVFEDESEKGSNALLA-----RAWSPGWSNADKALTTFI--NGPLIEYSKNRR 233
RC P + + E L W G S + L + G + ++K +
Sbjct: 178 RCSPPELGLAECYGVPLPTDLKIPPESISPWRGGESEGLQRLEQHLADQGWVASFTKPKT 237
Query: 234 KADSA--TTSFLSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVN--LFLKSIGL 289
+S +T+ LSP+ G +SVR F+ R+ + + + S+ L +
Sbjct: 238 VPNSLLPSTTGLSPYFSTGCLSVRSFFY--RLSNIYAQAKHHSLPPVSLQGQLLWREFFY 295
Query: 290 REYSRYMSFNHPYSHERPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGW 349
S +F + P+ ++ W D W+ +TG+P +DA M +L GW
Sbjct: 296 TVASATPNFTKMAGN--PICLQIR---WYEDAERLHKWKTAQTGFPWIDAIMTQLRQEGW 350
Query: 350 LHDRIRVVVSSFFVKV-LQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDR 408
+H R + F + L + W GMK F + LLDAD +A W ++S + + R
Sbjct: 351 IHHLARHAAACFLTRGDLWISWEEGMKVFEELLLDADYSINAGNWMWLSASA-FFHHYTR 409
Query: 409 IDNPQFEGYKFDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPFPIV 468
I P G + DP G+Y+R++LP L P+++I+ PW A E + AG +G +YPFP+V
Sbjct: 410 IFCPVRFGRRTDPEGQYIRKYLPILKNFPSKYIYEPWTASEEEQKQAGCIIGRDYPFPMV 469
Score = 41 (19.5 bits), Expect = 1.5e-22, Sum P(2) = 1.5e-22
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 11 FRRDLRVEDNP 21
FR+ LR+ DNP
Sbjct: 9 FRKGLRLHDNP 19
>UNIPROTKB|F1P5X2 [details] [associations]
symbol:LOC395100 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875 GO:GO:0006281
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 GeneTree:ENSGT00500000044813 EMBL:AADN02063941
IPI:IPI00821352 Ensembl:ENSGALT00000040673 OMA:WTASEEE
ArrayExpress:F1P5X2 Uniprot:F1P5X2
Length = 547
Score = 290 (107.1 bits), Expect = 1.9e-22, Sum P(2) = 1.9e-22
Identities = 98/360 (27%), Positives = 159/360 (44%)
Query: 123 GIAVRSFNADLLYEPWDVNDAQG-QPFATFAAFWEKCLSMPFDPDAPLLPPKRINSGDMS 181
G V S LY + + G P T+ F + LS+ DP+ P+ P + D
Sbjct: 140 GFQVLSLMGHSLYNTQRILELNGGTPPLTYKRFL-RILSLLGDPEVPVRNP---TAEDFQ 195
Query: 182 RC-PSDTLVFEDESEKGSNALLA-----RAWSPGWSNADKALTTFI--NGPLIEYSKNRR 233
RC P + + E L W G S + L + G + ++K +
Sbjct: 196 RCSPPELGLAECYGVPLPTDLKIPPESISPWRGGESEGLQRLEQHLADQGWVASFTKPKT 255
Query: 234 KADSA--TTSFLSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVN--LFLKSIGL 289
+S +T+ LSP+ G +SVR F+ R+ + + + S+ L +
Sbjct: 256 VPNSLLPSTTGLSPYFSTGCLSVRSFFY--RLSNIYAQAKHHSLPPVSLQGQLLWREFFY 313
Query: 290 REYSRYMSFNHPYSHERPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGW 349
S +F + P+ ++ W D W+ +TG+P +DA M +L GW
Sbjct: 314 TVASATPNFTKMAGN--PICLQIR---WYEDAERLHKWKTAQTGFPWIDAIMTQLRQEGW 368
Query: 350 LHDRIRVVVSSFFVKV-LQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDR 408
+H R + F + L + W GMK F + LLDAD +A W ++S + + R
Sbjct: 369 IHHLARHAAACFLTRGDLWISWEEGMKVFEELLLDADYSINAGNWMWLSASA-FFHHYTR 427
Query: 409 IDNPQFEGYKFDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPFPIV 468
I P G + DP G+Y+R++LP L P+++I+ PW A E + AG +G +YPFP+V
Sbjct: 428 IFCPVRFGRRTDPEGQYIRKYLPILKNFPSKYIYEPWTASEEEQKQAGCIIGRDYPFPMV 487
Score = 41 (19.5 bits), Expect = 1.9e-22, Sum P(2) = 1.9e-22
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 11 FRRDLRVEDNP 21
FR+ LR+ DNP
Sbjct: 27 FRKGLRLHDNP 37
>UNIPROTKB|F1MXB2 [details] [associations]
symbol:CRY1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042752 "regulation of circadian rhythm" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003690
"double-stranded DNA binding" evidence=IEA] [GO:0000988 "protein
binding transcription factor activity" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0003913 "DNA photolyase activity" evidence=IEA]
InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875
GO:GO:0005739 GO:GO:0005634 GO:GO:0007623 GO:GO:0006281
GO:GO:0042752 GO:GO:0000122 GO:GO:0003690 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
GeneTree:ENSGT00500000044813 OMA:FDTDGLP GO:GO:0000988
EMBL:DAAA02013749 EMBL:DAAA02013752 EMBL:DAAA02013750
EMBL:DAAA02013751 IPI:IPI00868590 Ensembl:ENSBTAT00000057061
Uniprot:F1MXB2
Length = 587
Score = 288 (106.4 bits), Expect = 2.8e-22, P = 2.8e-22
Identities = 122/502 (24%), Positives = 209/502 (41%)
Query: 7 SIVWFRRDLRVEDNPXXXXXXXXXXXXX-XFIWAPEEEGPYYPGRVSRW-WXXXXXXXXX 64
++ WFR+ LR+ DNP +I P G G ++RW +
Sbjct: 5 AVHWFRKGLRLHDNPALKECIQGADTIRCVYILDPWFAGSSNVG-INRWRFLLQCLEDLD 63
Query: 65 XXXXXXGTSLVTKRSTDSVSSLLEVVKATGATQLFFNHLYDPLSLVRDHRAKEALTAQGI 124
+ L R + + K T+L + +P RD K+ T G+
Sbjct: 64 ANLRKLNSRLFVIRGQPA-DVFPRLFKEWNITKLSIEYDSEPFGKERDAAIKKLATEAGV 122
Query: 125 AVRSFNADLLYEPWDVNDAQG-QPFATFAAFWEKCLSMPFDPDAPLLPPKRINSGDMSRC 183
V + LY+ + + G QP T+ F + L +P +P + I S + +C
Sbjct: 123 EVIVRISHTLYDLDKIIELNGGQPPLTYKRF--QTLISKMEPLE--IPVETITSEVIEKC 178
Query: 184 PSDTLVFEDES-------EKG--SNALLARAWSPGWSNADKALTTFINGP--LIEYSKNR 232
+ DE E G ++ L + W G + A L + + + + R
Sbjct: 179 TTPLSDDHDEKYGVPSLEELGFDTDGLPSAVWPGGETEALTRLERHLERKAWVANFERPR 238
Query: 233 RKADS--ATTSFLSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLR 290
A+S A+ + LSP+L FG +S R +F+ K + K ++L+ + + R
Sbjct: 239 MNANSLLASPTGLSPYLRFGCLSCR-LFYF---KLTDLYKKVKKNSSPPLSLYGQLLW-R 293
Query: 291 EYSRYMSFNHPYSHE---RPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWAT 347
E+ + N+P + P+ + W + W +GRTG+P +DA M +L
Sbjct: 294 EFFYTAATNNPRFDKMEGNPICVQIP---WDKNPEALAKWAEGRTGFPWIDAIMTQLRQE 350
Query: 348 GWLHDRIRVVVSSFFVKV-LQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAF 406
GW+H R V+ F + L + W GMK L+ + +Q+++ +
Sbjct: 351 GWIHHLARHAVACFLTRGDLWISWEEGMKVKKHLFLNYRESVNLKSFQWLNQPTHQHQVV 410
Query: 407 DRIDNPQFEGYKFDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPFP 466
+P G + + G RR+LP L P ++I+ PWNAPE + + A +G NYP P
Sbjct: 411 HEY-SPLLMGSRDEEKGNNKRRYLPVLRGFPAKYIYDPWNAPEGIQKVAKCLIGVNYPKP 469
Query: 467 IVRIDAAKCRLD-EALSEMWQQ 487
+V A RL+ E + +++QQ
Sbjct: 470 MVN-HAEASRLNIERMKQIYQQ 490
>SGD|S000005913 [details] [associations]
symbol:PHR1 "DNA photolyase involved in photoreactivation"
species:4932 "Saccharomyces cerevisiae" [GO:0005739 "mitochondrion"
evidence=IEA;IDA] [GO:0003729 "mRNA binding" evidence=IDA]
[GO:0000719 "photoreactive repair" evidence=TAS] [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=IEA;IDA;TAS]
[GO:0005634 "nucleus" evidence=IEA;TAS] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0016829 "lyase activity" evidence=IEA] [GO:0018298
"protein-chromophore linkage" evidence=IEA] [GO:0003913 "DNA
photolyase activity" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] InterPro:IPR002081 InterPro:IPR005101
InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394
PROSITE:PS00691 SGD:S000005913 InterPro:IPR006050 Pfam:PF00875
GO:GO:0005739 GO:GO:0005634 EMBL:BK006948 GO:GO:0000166
GO:GO:0003677 GO:GO:0003729 GO:GO:0018298 GO:GO:0000719
Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645
HOGENOM:HOG000245621 GeneTree:ENSGT00500000044813 KO:K01669
GO:GO:0003904 EMBL:X03183 EMBL:M11578 EMBL:Z75294 PIR:S67298
RefSeq:NP_015031.1 ProteinModelPortal:P05066 SMR:P05066
DIP:DIP-6327N IntAct:P05066 MINT:MINT-688138 STRING:P05066
PaxDb:P05066 PeptideAtlas:P05066 EnsemblFungi:YOR386W GeneID:854568
KEGG:sce:YOR386W CYGD:YOR386w OMA:CEDANAR OrthoDB:EOG4XPTQ3
NextBio:977015 Genevestigator:P05066 GermOnline:YOR386W
Uniprot:P05066
Length = 565
Score = 282 (104.3 bits), Expect = 3.8e-22, Sum P(2) = 3.8e-22
Identities = 68/220 (30%), Positives = 111/220 (50%)
Query: 217 LTTFINGPLIEYSKNRRKADSATTSFLSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKA- 275
L F+ +Y+ + TS LS ++ G +S R + + + Q +KA
Sbjct: 315 LKDFLGTKSSKYNNEKDMLYLGGTSGLSVYITTGRISTRLIVN--QAFQSCNGQIMSKAL 372
Query: 276 -GDESVNLFLKSIGLREYSRYMSFNHPY-SHERPLLGHLKFFSWVVDEGYFKAWRQGRTG 333
+ S F+K + R++ R+ N PY S P W + F+ W G TG
Sbjct: 373 KDNSSTQNFIKEVAWRDFYRHCMCNWPYTSMGMPYRLDTLDIKWENNPVAFEKWCTGNTG 432
Query: 334 YPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGW 393
P+VDA MR+L TG++++R R++ +SF K L + WRWG ++F L+D D S+ GW
Sbjct: 433 IPIVDAIMRKLLYTGYINNRSRMITASFLSKNLLIDWRWGERWFMKHLIDGDSSSNVGGW 492
Query: 394 QYISGTIPDGRAFDRIDNPQFEGYKFDPNGEYVRRWLPEL 433
+ S T D + + R+ N + K+DP +V++W+PEL
Sbjct: 493 GFCSSTGIDAQPYFRVFNMDIQAKKYDPQMIFVKQWVPEL 532
Score = 48 (22.0 bits), Expect = 3.8e-22, Sum P(2) = 3.8e-22
Identities = 8/11 (72%), Positives = 9/11 (81%)
Query: 10 WFRRDLRVEDN 20
WFR DLR+ DN
Sbjct: 80 WFRNDLRLYDN 90
>UNIPROTKB|Q7T3R1 [details] [associations]
symbol:LOC395100 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 GO:GO:0006281 GO:GO:0003913 SUPFAM:SSF48173
GeneTree:ENSGT00500000044813 HSSP:P00914 EMBL:AADN02063941
UniGene:Gga.5544 EMBL:AY102068 IPI:IPI00821473
Ensembl:ENSGALT00000040670 HOGENOM:HOG000202408 InParanoid:Q7T3R1
Uniprot:Q7T3R1
Length = 140
Score = 230 (86.0 bits), Expect = 2.7e-18, P = 2.7e-18
Identities = 47/134 (35%), Positives = 71/134 (52%)
Query: 317 WVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKV-LQLPWRWGMK 375
W D W+ +TG+P +DA M +L GW+H R + F + L + W GMK
Sbjct: 2 WYEDAERLHKWKTAQTGFPWIDAIMTQLRQEGWIHHLARHAAACFLTRGDLWISWEEGMK 61
Query: 376 YFWDTLLDADLESDALGWQYISGTIPDGRAFDRIDNPQFEGYKFDPNGEYVRRWLPELAR 435
F + LLDAD +A W ++S + + RI P G + DP G+Y+R++LP L
Sbjct: 62 VFEELLLDADYSINAGNWMWLSASA-FFHHYTRIFCPVRFGRRTDPEGQYIRKYLPILKN 120
Query: 436 LPTEWIHHPWNAPE 449
P+++I+ PW A E
Sbjct: 121 FPSKYIYEPWTASE 134
>UNIPROTKB|Q9KR33 [details] [associations]
symbol:cry1 "Cryptochrome DASH" species:243277 "Vibrio
cholerae O1 biovar El Tor str. N16961" [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 GO:GO:0006355 GO:GO:0003677
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0006281 GO:GO:0006351
GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 PIR:B82155
RefSeq:NP_231448.1 ProteinModelPortal:Q9KR33 DNASU:2613694
GeneID:2613694 KEGG:vch:VC1814 PATRIC:20082676 KO:K01669
OMA:YWLIFEL ProtClustDB:CLSK874544 GO:GO:0003904 InterPro:IPR014133
TIGRFAMs:TIGR02765 Uniprot:Q9KR33
Length = 461
Score = 218 (81.8 bits), Expect = 5.2e-16, Sum P(2) = 5.2e-16
Identities = 64/206 (31%), Positives = 106/206 (51%)
Query: 228 YSKNRRKADSA--TTSFLSPHLHFGEVSVRKVFHLV-RIKQVSWANEGNKAGDESVNLFL 284
Y + R D +T F SP L G VS + ++ ++ R + V AN D + +F
Sbjct: 222 YKETRNGLDGMDYSTKF-SPWLALGAVSPKTIYAMLQRYEAVHGAN------DSTYWIFF 274
Query: 285 KSIGLREYSRYMSFNHPYSHER-PLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRE 343
+ + REY + + + R +G K + + + + W+ G T +P+V+A MR+
Sbjct: 275 ELLW-REYFYWYARRYGAKLFRFSGIGEKKPLTSFYAQRFLQ-WKHGETPFPIVNACMRQ 332
Query: 344 LWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDG 403
L TG++ +R R +V+S V L L WR+G YF L+D D+ S+ WQY++G D
Sbjct: 333 LNQTGYMSNRGRQLVASCLVHELGLDWRYGAAYFETQLVDYDVGSNWGNWQYLAGVGADP 392
Query: 404 RAFDRIDNPQFEGYKFDPNGEYVRRW 429
R R N + + + +DP GE+V +W
Sbjct: 393 RG-SRQFNLEKQAHTYDPKGEFVAKW 417
Score = 55 (24.4 bits), Expect = 5.2e-16, Sum P(2) = 5.2e-16
Identities = 9/14 (64%), Positives = 10/14 (71%)
Query: 8 IVWFRRDLRVEDNP 21
+ WF DLRV DNP
Sbjct: 7 LYWFTNDLRVNDNP 20
>TIGR_CMR|VC_1814 [details] [associations]
symbol:VC_1814 "RNA-binding cryptochrome Cry1" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 GO:GO:0006355 GO:GO:0003677
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0006281 GO:GO:0006351
GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 PIR:B82155
RefSeq:NP_231448.1 ProteinModelPortal:Q9KR33 DNASU:2613694
GeneID:2613694 KEGG:vch:VC1814 PATRIC:20082676 KO:K01669
OMA:YWLIFEL ProtClustDB:CLSK874544 GO:GO:0003904 InterPro:IPR014133
TIGRFAMs:TIGR02765 Uniprot:Q9KR33
Length = 461
Score = 218 (81.8 bits), Expect = 5.2e-16, Sum P(2) = 5.2e-16
Identities = 64/206 (31%), Positives = 106/206 (51%)
Query: 228 YSKNRRKADSA--TTSFLSPHLHFGEVSVRKVFHLV-RIKQVSWANEGNKAGDESVNLFL 284
Y + R D +T F SP L G VS + ++ ++ R + V AN D + +F
Sbjct: 222 YKETRNGLDGMDYSTKF-SPWLALGAVSPKTIYAMLQRYEAVHGAN------DSTYWIFF 274
Query: 285 KSIGLREYSRYMSFNHPYSHER-PLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRE 343
+ + REY + + + R +G K + + + + W+ G T +P+V+A MR+
Sbjct: 275 ELLW-REYFYWYARRYGAKLFRFSGIGEKKPLTSFYAQRFLQ-WKHGETPFPIVNACMRQ 332
Query: 344 LWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDG 403
L TG++ +R R +V+S V L L WR+G YF L+D D+ S+ WQY++G D
Sbjct: 333 LNQTGYMSNRGRQLVASCLVHELGLDWRYGAAYFETQLVDYDVGSNWGNWQYLAGVGADP 392
Query: 404 RAFDRIDNPQFEGYKFDPNGEYVRRW 429
R R N + + + +DP GE+V +W
Sbjct: 393 RG-SRQFNLEKQAHTYDPKGEFVAKW 417
Score = 55 (24.4 bits), Expect = 5.2e-16, Sum P(2) = 5.2e-16
Identities = 9/14 (64%), Positives = 10/14 (71%)
Query: 8 IVWFRRDLRVEDNP 21
+ WF DLRV DNP
Sbjct: 7 LYWFTNDLRVNDNP 20
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.134 0.427 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 681 602 0.00086 120 3 11 22 0.41 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 58
No. of states in DFA: 630 (67 KB)
Total size of DFA: 387 KB (2186 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 46.81u 0.23s 47.04t Elapsed: 00:00:02
Total cpu time: 46.83u 0.23s 47.06t Elapsed: 00:00:02
Start: Thu May 9 22:20:25 2013 End: Thu May 9 22:20:27 2013