Your job contains 1 sequence.
>005716
MQILQSSHLFTFPKPLNPNRPLLHNNNNNRRHVTFPAAATTKSFPPKCFSSDEFPVDETF
LEQFGPKDKETEDEARRRNWIERGWAPWEEILTPEADFARKSLNEGDEVALQSPEAVEAF
KMLKPSYRMKKIKEMGITEDEWYKKQFEIKGEIPEKLETVWAAPLLVTHVAPRDWPPRGW
EVDRKELEYIREAHKLQNVRVEIGELERKAKFEREGFNFDMYRVFLKQYNQWVAANKDRL
EEESYKYDQDYYPGRRKRGKDYEEGMYELPFYYPGQICEGKVTTVHLYQGAFVDIGGVYD
GWVPIKGNDWYWIRHHIKVGMHVIVEILAKRDPYRFRFPIEMRFVQPNIDHLIFNRFDFA
PIFHRDEDKNPDELRRDCGRPPVPRKYPGVKPEEEGLLSTHPYVDKLWQIHNAEQLILDD
MEANPDKYKGKKLSELTDDEEFDDENSVEYTKVNYKKALLAKIILKTSVKELDLEAALAE
REHHNKLQREAKERGEQYKVYKLRRNFEMDEYNFIHWRRSLEEREALIRDISCRQALGLP
LEEPGRYKEDSFFGKDEYDPSNPLYRYDYWGEPKNSEKSLQERMRDAHNKSIVGKGMVWY
EMSYDDVIKQKMQREARSKCVTPEEVEEEDSTSGHGNGDDDDDGDFDYSILSDSSSLSFS
NQPVVNGTESSSISDEGMFED
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 005716
(681 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2101150 - symbol:PDE312 "PIGMENT DEFECTIVE 312... 1223 1.9e-124 1
>TAIR|locus:2101150 [details] [associations]
symbol:PDE312 "PIGMENT DEFECTIVE 312" species:3702
"Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0009295 "nucleoid" evidence=IDA] [GO:0009508
"plastid chromosome" evidence=IDA] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0042793
"transcription from plastid promoter" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
GO:GO:0005829 GO:GO:0009570 EMBL:CP002686 GenomeReviews:BA000014_GR
InterPro:IPR022967 SMART:SM00316 GO:GO:0009508 EMBL:AK229521
IPI:IPI00524815 RefSeq:NP_001078259.1 UniGene:At.28078
ProteinModelPortal:Q0WNC4 SMR:Q0WNC4 STRING:Q0WNC4 PaxDb:Q0WNC4
PRIDE:Q0WNC4 EnsemblPlants:AT3G48500.2 GeneID:824009
KEGG:ath:AT3G48500 TAIR:At3g48500 eggNOG:NOG331936
HOGENOM:HOG000238574 OMA:ELPFYYP PhylomeDB:Q0WNC4
ProtClustDB:CLSN2680896 Genevestigator:Q0WNC4 Uniprot:Q0WNC4
Length = 697
Score = 1223 (435.6 bits), Expect = 1.9e-124, P = 1.9e-124
Identities = 221/298 (74%), Positives = 253/298 (84%)
Query: 45 PPKCFSSDEFPVDETFLEQFGPKDKETEDEARRRNWIERGWAPWEEILTPEADFARKSLN 104
P + FSSDEFPVDETFLE+FGPKDK+TEDEARRRNWIERGWAPWEEILTPEADFARKSLN
Sbjct: 38 PCRGFSSDEFPVDETFLEKFGPKDKDTEDEARRRNWIERGWAPWEEILTPEADFARKSLN 97
Query: 105 EGDEVALQSPEAVEAFKMLKPSYRMKKIKEMGITEDEWYKKQFEIKGEIPEKLETVWAAP 164
EG+EV LQSPEA+EAFKML+PSYR KKIKEMGITEDEWY KQFEI+G+ P LET WA P
Sbjct: 98 EGEEVPLQSPEAIEAFKMLRPSYRKKKIKEMGITEDEWYAKQFEIRGDKPPPLETSWAGP 157
Query: 165 LLVTHVAPRDWPPRGWEVDRKELEYIREAHKLQNVRVEIGELERKAKFEREG----FNFD 220
+++ + PRDWPPRGWEVDRKELE+IREAHKL RV + +L++ + + +
Sbjct: 158 MVLRQIPPRDWPPRGWEVDRKELEFIREAHKLMAERVWLEDLDKDLRVGEDATVDKMCLE 217
Query: 221 MYRVFLKQYNQWVAANKDRLEEESYKYDQDYYPGRRKRGKDYEEGMYELPFYYPGQICEG 280
++VFLKQY +WV NKDRLEEESYK DQD+YPGRRKRGKDYE+GMYELPFYYPG +CEG
Sbjct: 218 RFKVFLKQYKEWVEDNKDRLEEESYKLDQDFYPGRRKRGKDYEDGMYELPFYYPGMVCEG 277
Query: 281 KVTTVHLYQGAFVDIGGVYDGWVPIKGNDWYWIRHHIKVGMHVIVEI-LAKRDPYRFR 337
VTT+HLYQGAFVDIGGV++GWVPIKGNDW+WIRH IKVGMHVIVEI + R + FR
Sbjct: 278 TVTTLHLYQGAFVDIGGVHEGWVPIKGNDWFWIRHFIKVGMHVIVEITVILRHIFFFR 335
Score = 1157 (412.3 bits), Expect = 1.8e-117, P = 1.8e-117
Identities = 231/427 (54%), Positives = 280/427 (65%)
Query: 251 YYPGRRKRGKDYEEGMYELPFYYPGQICEGKVTTVH---LYQGAFVDIGG--VYDGWVPI 305
YYPG G +Y+ F G + EG V + F+ +G + + V +
Sbjct: 269 YYPGMVCEGTVTTLHLYQGAFVDIGGVHEGWVPIKGNDWFWIRHFIKVGMHVIVEITVIL 328
Query: 306 KGNDWYWIRHHIKVGMHVIVEIL---AKRDPYRFRFPIEMRFVQPNIDHLIFNRFDFAPI 362
+ ++ I ++ +++ +L AKRDPYRFRFP+E+RFV PNIDH+IFN+FDF PI
Sbjct: 329 RHIFFFRIYKNLNGNCFILLFLLFFQAKRDPYRFRFPLELRFVHPNIDHMIFNKFDFPPI 388
Query: 363 FHRDEDKNPDELRRDCGRPPVPRKYPGVKPEEEGLLSTHPYVDKLWQIHNAEQLILDDME 422
FHRD D NPDE+RRDCGRPP PRK PG KPEEEGLLS HPYVDKLWQIH AEQ+IL D E
Sbjct: 389 FHRDGDTNPDEIRRDCGRPPEPRKDPGSKPEEEGLLSDHPYVDKLWQIHVAEQMILGDYE 448
Query: 423 ANPDKYKGKKLSELTDDEEFDDENSVEYTKVNYXXXXXXXXXXXTSVKXXXXXXXXXXRE 482
ANP KY+GKKLSEL+DDE+FD++ +EY + Y TSVK R+
Sbjct: 449 ANPAKYEGKKLSELSDDEDFDEQKDIEYGEAYYKKTKLPKVILKTSVKELDLEAALTERQ 508
Query: 483 HHNKLQREAKERGEQYKVYKLRRNFEMDEYNFIHWRRSLEEREALIRDISCRQALGLPLE 542
HHNKL EAK RGE YK+ KLRRN EMDEY+F+HWRRSLEEREAL+RDIS RQALGLPLE
Sbjct: 509 HHNKLMMEAKARGEGYKIDKLRRNIEMDEYDFLHWRRSLEEREALLRDISSRQALGLPLE 568
Query: 543 EPGRYKEDSFFGKDEYDPSNPLYRYDYWGEPKNSEKSLQERMRDAHNKSIVGKGMVWYEM 602
EPGRYK SFFGKD+YDP++ LY+YDYWGEPKNSE S QERM+DAHNKSIVGKG VWY+M
Sbjct: 569 EPGRYKPGSFFGKDQYDPTSALYQYDYWGEPKNSEISKQERMKDAHNKSIVGKGNVWYDM 628
Query: 603 SYDDVIKQKMQREARSKCVTPEEVEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQ 662
SYDD IKQ +++ + +E EE Q
Sbjct: 629 SYDDAIKQTIEKRKEGSTLASQE--EETESEEEEEDDDDFDDFDYSILSDESSIGYSEQQ 686
Query: 663 PVVNGTE 669
P+VNGT+
Sbjct: 687 PLVNGTQ 693
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.137 0.422 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 681 611 0.00087 120 3 11 22 0.43 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1
No. of states in DFA: 626 (67 KB)
Total size of DFA: 401 KB (2193 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 58.54u 0.10s 58.64t Elapsed: 00:00:20
Total cpu time: 58.54u 0.10s 58.64t Elapsed: 00:00:20
Start: Thu May 9 23:01:23 2013 End: Thu May 9 23:01:43 2013