BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005719
(681 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359484783|ref|XP_002270833.2| PREDICTED: two-component response regulator ARR12-like [Vitis
vinifera]
Length = 712
Score = 803 bits (2074), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/713 (59%), Positives = 530/713 (74%), Gaps = 33/713 (4%)
Query: 1 MTAEERMGSAGCEDGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTAL 60
MT EER G EDG D FP+GMRVLAVDDDPTCL +L+ LR CQY+VT TNQA+TAL
Sbjct: 1 MTVEERKGGLAGEDGVKDPFPVGMRVLAVDDDPTCLMLLDGLLRRCQYQVTTTNQAITAL 60
Query: 61 KMLRENRNNFDLVISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGAC 120
KMLREN+NNFDLVISDV MPDMDGFKLLE VGLEMDLPVIMLS++ D KLVM+GITHGAC
Sbjct: 61 KMLRENKNNFDLVISDVSMPDMDGFKLLELVGLEMDLPVIMLSSHSDPKLVMRGITHGAC 120
Query: 121 DYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNG 180
DYLLKPVRIEELKNIWQHVIRRKK+ KDQNK +Q+N+ GEGG+G S+ N+DQNG
Sbjct: 121 DYLLKPVRIEELKNIWQHVIRRKKIDSKDQNKSADQDNALHADGEGGEGPPSSSNADQNG 180
Query: 181 KSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPK 240
K NRKRKDQ+ DE+E+G+++G ENED ++QKKPRVVW+ ELHRKFV AVNQLG++KAVPK
Sbjct: 181 KLNRKRKDQNEDEEEEGEENGEENEDPSSQKKPRVVWSVELHRKFVAAVNQLGIEKAVPK 240
Query: 241 KILDLMNVEGLTRENVASHLQKFRLYLKRLSN-ETPQAGMVAALGSKDSSYLRIGALDGF 299
+ILDLMNVEGLTRENVASHLQK+RLYLKR+S T QA MVAA G+KDSSY+R+G+LDGF
Sbjct: 241 RILDLMNVEGLTRENVASHLQKYRLYLKRISCVATQQANMVAAFGAKDSSYMRMGSLDGF 300
Query: 300 GDLRSLNSPGRLSSSAISSSYVPGNMFGRFNSTSGLSMHGIASSGMIQPGHSQSFNTSFN 359
GD R L PGRL+S+A+ SSY P M GR NS +GLS+ G+ SSG+IQ GH+Q+ + S N
Sbjct: 301 GDFRGLAGPGRLNSTAM-SSYPPSGMLGRLNSPAGLSLRGLTSSGLIQTGHAQNSSNSVN 359
Query: 360 TIGKIQQAMFPANRISNLFQGVRTSSELNQLPQSKS-TTQIGDFNHINSPTTSMAATGFT 418
T GK+Q + P N+ ++LFQG+ TS EL+QL Q K +TQ G+F+ +++ T A GF
Sbjct: 360 THGKLQPVVLPTNQSASLFQGIPTSLELDQLQQRKCISTQRGEFSSVDNTTVFTTANGFP 419
Query: 419 DATVAVGSSSSSVSTSSSNIMMLQGNLHQAHSRDAYGNQSSLSVASLNQESFDVGVRNSS 478
D+ + V SSS+S+S + SN +MLQ N Q R NQSSL +LN E + +GV SS
Sbjct: 420 DSRMTVHSSSNSLSNAPSNPLMLQSNPQQTLCRGGLANQSSLKAVTLNPEPYTMGVSGSS 479
Query: 479 NFLDHSRCNESWQDAVQLS---SNSLPLSEPFIHDQMPP-NLRNTLSST------SCLDI 528
NFLDH RCNE+WQ A+QLS SNSLPLSEP D + NLR +SST S +D
Sbjct: 480 NFLDHGRCNENWQSALQLSKFPSNSLPLSEPLNCDPLTTNNLREHISSTGSHIRRSPIDF 539
Query: 529 SSSMATSTHLEDSRGDLSCQPGLIGNVIQ--NYTSKQQWLEHKQGYNQNLNNPFSNVNTL 586
S++ + LEDSRG++ CQ GLIGNV+Q NY KQ+W E KQ Y Q+ N+ F +N++
Sbjct: 540 SATSVLAGPLEDSRGEMPCQSGLIGNVVQNINYAPKQRWEEQKQDYTQSSNHVFGTLNSI 599
Query: 587 LSGNCTMGPFSQSMDQSNS--------PYI----------AQLTGVEKAPLNTKLRSNDD 628
+ N MGP + S+DQ+N+ P I Q + VEK+ ++TK+ SN+D
Sbjct: 600 IPANNVMGPLNHSLDQNNAACNRKMDMPLISQSNASSSSLVQHSEVEKSAMDTKMVSNED 659
Query: 629 FLLEQSKSHDGFIQNNYDPMDDMMSGILKRDSNETILMDGELGFDAYSLSSCM 681
+LLEQ+KS DG I N+Y+ +DD+MS ++KR+ +ET+LM+GE GFDAYSL C+
Sbjct: 660 YLLEQTKSQDGLIHNSYESLDDLMSAMIKREHDETMLMNGEFGFDAYSLGPCI 712
>gi|224143990|ref|XP_002325148.1| type-b response regulator [Populus trichocarpa]
gi|222866582|gb|EEF03713.1| type-b response regulator [Populus trichocarpa]
Length = 707
Score = 761 bits (1965), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/714 (58%), Positives = 518/714 (72%), Gaps = 40/714 (5%)
Query: 1 MTAEERMGSAGCEDGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTAL 60
MT E++ GC + FP+GMRVLAVDDDP CLKVLEN LR CQYEVT TNQAVTAL
Sbjct: 1 MTVEDQ---RGCNSVNEKMFPVGMRVLAVDDDPICLKVLENLLRKCQYEVTTTNQAVTAL 57
Query: 61 KMLRENRNNFDLVISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGAC 120
+MLRENRN +DLVISDV+MPDMDGFKLLE VGLEMDLPVIMLS++GD + V KGITHGA
Sbjct: 58 EMLRENRNKYDLVISDVNMPDMDGFKLLELVGLEMDLPVIMLSSHGDKEFVFKGITHGAV 117
Query: 121 DYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNG 180
DYLLKPVR+EELKNIWQHVIRRKK P+DQN +Q+ GAGEG Q STG++DQNG
Sbjct: 118 DYLLKPVRLEELKNIWQHVIRRKKWYPQDQNGSPDQDKGGDGAGEGEQ-VTSTGSADQNG 176
Query: 181 KSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPK 240
K NRKRKDQD +E+E +DG++NE+S QKKPRVVW+ ELH+KFV AVNQLG+DKAVPK
Sbjct: 177 KVNRKRKDQD-EEEEGEGEDGNDNEESGNQKKPRVVWSVELHQKFVSAVNQLGLDKAVPK 235
Query: 241 KILDLMNVEGLTRENVASHLQKFRLYLKRLS-NETPQAGMVAALGSKDSSYLRIGALDGF 299
KILDLMNV+GLTRENVASHLQKFRLYLKRLS Q MVAA G+KDSSYLR+G+LDGF
Sbjct: 236 KILDLMNVDGLTRENVASHLQKFRLYLKRLSCGANQQPNMVAAFGAKDSSYLRMGSLDGF 295
Query: 300 GDLRSLNSPGRLSSSAISSSYVPGNMFGRFNSTSGLSMHGIASSGMIQPGHSQSFNTSFN 359
GD RS++ PG+LS++++ SSY PG++ GR NS GL++ GIAS G++QPGHS+S N N
Sbjct: 296 GDFRSVHGPGQLSTTSL-SSYPPGSLLGRLNSPGGLTLQGIASPGLLQPGHSRSLNNPLN 354
Query: 360 TIGKIQQAMFPANRIS-NLFQGVRTSSELNQLPQSKSTTQIGDFNHINSPTTSMAATGFT 418
T+GK+Q + NR S NLFQG+ ++ + Q Q KS GDFNH T+ A F
Sbjct: 355 TLGKLQPGLLQTNRGSTNLFQGISSALDPKQF-QLKSMNHSGDFNHKGDATSFTLAGCFP 413
Query: 419 DATVAVGSSSSSVSTSSSNIMMLQGNLHQAHSRDAYGNQSSLSVASLNQESFDVGVRNSS 478
D V +GS +++S++++N ML N Q +R + QSSLS+ SLNQESFDVGVR SS
Sbjct: 414 DVKVTIGSLGNTISSAANNPQMLHVNPQQNQTRRSLATQSSLSMPSLNQESFDVGVRGSS 473
Query: 479 NFLDHSRCNESWQDAVQLS---SNSLPLSEPFIHDQMPPNL-RNTLSSTSC------LDI 528
NFLDHSRC+++WQ VQ+S SNSLPL EPF HD +P + R+ +SST+ LD
Sbjct: 474 NFLDHSRCDDNWQGVVQMSTFPSNSLPLGEPFRHDPLPTSTRRDNISSTTSHIVNNPLDF 533
Query: 529 SSSMATSTHLEDSRGDLSCQPGLIGNVIQ--NYTSKQQWLEHKQGYNQNLNNPFSNVNTL 586
SSS + + LEDSR D+ Q L+GN+ NYTSK +W E+ Q +N LN F +N+L
Sbjct: 534 SSSGSLTAPLEDSRLDMQGQADLVGNIFHNTNYTSKNRWGENSQNFNPCLNGSFGAMNSL 593
Query: 587 LSGNCTMGPFSQSMD-----------QSNSPYIAQLTGVEKA-----PLNT---KLRSND 627
+SGN +M P SQSMD QSNS ++ +E P K+RSN+
Sbjct: 594 VSGNGSMNPLSQSMDQRKRFDASVLGQSNSGTLSMFQHLEAGNSALDPTGMRIPKMRSNE 653
Query: 628 DFLLEQSKSHDGFIQNNYDPMDDMMSGILKRDSNETILMDGELGFDAYSLSSCM 681
DFLLEQ+KS +GF+QNNYD +DD+++ ++KRD N+ +LMDGE GF++YS SC+
Sbjct: 654 DFLLEQTKSPNGFVQNNYDSLDDIVNAMIKRDQNDGVLMDGEFGFESYSPGSCI 707
>gi|147787458|emb|CAN60088.1| hypothetical protein VITISV_005486 [Vitis vinifera]
Length = 706
Score = 758 bits (1958), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/706 (57%), Positives = 510/706 (72%), Gaps = 49/706 (6%)
Query: 1 MTAEERMGSAGCEDGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYE----------- 49
MT EER G EDG D FP+GMRVLAVDDDPTCL +L+ LR CQY+
Sbjct: 1 MTVEERKGGLAGEDGVKDPFPVGMRVLAVDDDPTCLMLLDGLLRRCQYQGLVLLCFARLL 60
Query: 50 -----VTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDGFKLLEHVGLEMDLPVIMLSA 104
VT TNQA+TALKMLREN+NNFDLVISDV MPDMDGFKLLE VGLEMDLPVIMLS+
Sbjct: 61 LYMNFVTTTNQAITALKMLRENKNNFDLVISDVSMPDMDGFKLLELVGLEMDLPVIMLSS 120
Query: 105 YGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRVGAG 164
+ D KLVM+GITHGACDYLLKPVRIEELKNIWQHVIRRKK+ KDQNK +Q+N+ G
Sbjct: 121 HSDQKLVMRGITHGACDYLLKPVRIEELKNIWQHVIRRKKIDSKDQNKSADQDNALHADG 180
Query: 165 EGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRK 224
EGG+G S+ N+DQNGK NRKRKDQ+ DE+E+G+++G ENED ++QKKPRVVW+ ELHRK
Sbjct: 181 EGGEGPPSSSNADQNGKLNRKRKDQNEDEEEEGEENGEENEDPSSQKKPRVVWSVELHRK 240
Query: 225 FVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKRLSN-ETPQAGMVAAL 283
FV AVNQLG++KAVPK+ILDLMNVEGLTRENVASHLQK+RLYLKR+S T QA VAA
Sbjct: 241 FVAAVNQLGIEKAVPKRILDLMNVEGLTRENVASHLQKYRLYLKRISCVATQQANXVAAF 300
Query: 284 GSKDSSYLRIGALDGFGDLRSLNSPGRLSSSAISSSYVPGNMFGRFNSTSGLSMHGIASS 343
G+KDSSY+R+G+LDGFGD R L PGRL+S+A+ SSY P M GR NS +GLS+ G+ SS
Sbjct: 301 GAKDSSYMRMGSLDGFGDFRGLAGPGRLNSTAM-SSYPPSGMLGRLNSPAGLSLRGLTSS 359
Query: 344 GMIQPGHSQSFNTSFNTIGKIQQAMFPANRISNLFQGVRTSSELNQLPQSKS-TTQIGDF 402
G+IQ GH+Q+ + S NT GK+Q + P N+ ++LFQG+ TS EL+QL Q K +TQIG+F
Sbjct: 360 GLIQTGHAQNSSNSVNTHGKLQPVVLPTNQSASLFQGIPTSLELDQLQQRKCISTQIGEF 419
Query: 403 NHINSPTTSMAATGFTDATVAVGSSSSSVSTSSSNIMMLQGNLHQAHSRDAYGNQSSLSV 462
+ +++ T A GF D+ + V SSS+S+S + SN +MLQ N Q R NQSSL
Sbjct: 420 SSVDNTTVFTTANGFPDSRMTVHSSSNSLSNAPSNPLMLQSNPQQTLCRGGLANQSSLKA 479
Query: 463 ASLNQESFDVGVRNSSNFLDHSRCNESWQDAVQLS---SNSLPLSEPFIHDQMPP-NLRN 518
+LN E + +GV SSNFLDH RCNE+WQ A+QLS SNSLPLSEP D + NLR
Sbjct: 480 VTLNPEPYTMGVSGSSNFLDHGRCNENWQSALQLSKFPSNSLPLSEPLNRDPLTTNNLRE 539
Query: 519 TLSST------SCLDISSSMATSTHLEDSRGDLSCQPGLIGNVIQ--NYTSKQQWLEHKQ 570
+SST S +D S++ + LEDSRG++ CQ GLIGNV+Q NY KQ+W E KQ
Sbjct: 540 HISSTGSHIRRSPIDFSATSXLAGPLEDSRGEMPCQSGLIGNVVQNINYAPKQRWEEQKQ 599
Query: 571 GYNQNLNNPFSNVNTLLSGNCTMGPFSQSMDQSNS--------PYI----------AQLT 612
Y Q+ N+ F +N+++ N MGP + S+D++N+ P I Q +
Sbjct: 600 DYTQSSNHVFGTLNSIIPANNVMGPLNHSLDRNNTACNRKMDMPLISQSNASSSSLVQHS 659
Query: 613 GVEKAPLNTKLRSNDDFLLEQSKSHDGFIQNNYDPMDDMMSGILKR 658
VEK+ ++TK+ N+D+LLEQ+KS DG I N+Y+ +DD+MS ++KR
Sbjct: 660 EVEKSAMDTKMVXNEDYLLEQTKSQDGLIHNSYESLDDLMSAMIKR 705
>gi|255565035|ref|XP_002523510.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
gi|223537217|gb|EEF38849.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
Length = 676
Score = 732 bits (1890), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/679 (59%), Positives = 502/679 (73%), Gaps = 35/679 (5%)
Query: 1 MTAEERMGSAGCEDGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTAL 60
MT E++ S+ DKFP+GMRVLAVDDDP CLKVL+ L+ CQY+VT TNQA+ AL
Sbjct: 1 MTVEDKRSSSE------DKFPVGMRVLAVDDDPICLKVLDTLLKKCQYQVTTTNQAIQAL 54
Query: 61 KMLRENRNNFDLVISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGAC 120
KMLRENRN +DLVISDV+MPDMDGFKLLE VGLEMDLPVIMLSA+ D +LV KG+THGA
Sbjct: 55 KMLRENRNKYDLVISDVNMPDMDGFKLLELVGLEMDLPVIMLSAHSDKELVYKGVTHGAV 114
Query: 121 DYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNG 180
DYLLKPVRIEELKNIWQHVIRRKK+ PKDQ++ NQ+ GAGEGGQG S+G+ DQNG
Sbjct: 115 DYLLKPVRIEELKNIWQHVIRRKKLQPKDQSRSQNQDKPLDGAGEGGQGMSSSGSEDQNG 174
Query: 181 KSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPK 240
K NRKRKDQD DE+E+G+D+ ++ ++ QKKPRVVW+ ELHRKFV AVNQLG+DKAVPK
Sbjct: 175 KVNRKRKDQDEDEEEEGEDNLNDTDEPGAQKKPRVVWSVELHRKFVAAVNQLGLDKAVPK 234
Query: 241 KILDLMNVEGLTRENVASHLQKFRLYLKRLSN-ETPQAGMVAALGSKDSSYLRIGALDGF 299
KILDLMNVEGLTRENVASHLQK+RLYLKR+S+ + QA MVAA G KDSSYLR+ +LDGF
Sbjct: 235 KILDLMNVEGLTRENVASHLQKYRLYLKRISSTASQQANMVAAFGIKDSSYLRMASLDGF 294
Query: 300 GDLRSLNSPGRLSSSAISSSYVPGNMFGRFNSTSGLSMHGIASSGMIQPGHSQSFNTSFN 359
G+ R+L+ PGRLSS++I SSY P M GR NS SGL++ GIASSG++QPG SQS ++S N
Sbjct: 295 GEFRTLSGPGRLSSTSI-SSYHPSGMLGRLNSPSGLTLRGIASSGLLQPGQSQSLSSSVN 353
Query: 360 TIGKIQQAMFPANRISNLFQGVRTSSELNQLPQSKSTTQIGDFNHINSPTTSMAATGFTD 419
T+GK+Q + +++ NLFQG+ +S E NQL QSKS+ G+FN + + F+D
Sbjct: 354 TLGKLQPTLLHSSQGVNLFQGIPSSLEPNQL-QSKSSAHFGEFNRNDDSSGFSLTNSFSD 412
Query: 420 ATVAVGSSSSSVSTSSSNIMMLQGNLHQAHSRDAYGNQSSLSVASLNQESFDVGVRNSSN 479
A V +GS S++ + SSN MMLQ + Q + + QSSLSV SLNQESFDVGVR SSN
Sbjct: 413 ARVTIGSLSNTATGPSSNPMMLQAHPQQNQNTGVFATQSSLSVPSLNQESFDVGVRGSSN 472
Query: 480 FLDHSRCNESWQDAVQLS--SNSLPLSEPFIHDQM-PPNLRNTLSST------SCLDISS 530
FLDHSRCNESWQ AVQLS S +LPLSEPF HD + N R+ +SST S D SS
Sbjct: 473 FLDHSRCNESWQGAVQLSKFSTTLPLSEPFSHDALSTSNFRDNMSSTNSRMVNSPTDYSS 532
Query: 531 SMATSTHLEDSRGDLSCQPGLIGNVIQ--NYTSKQQWLEHKQGYNQNLNNPFSNVNTLLS 588
S ++ L D+R D+ Q G GNV+Q +Y S+Q+W EH Q YN NL+N FS +N L+S
Sbjct: 533 SAVLASPL-DTRVDMQGQTGFAGNVVQSTSYNSRQRWEEHGQDYNPNLSNSFSTINPLVS 591
Query: 589 GNCTMGPFSQSMDQSN---------SPYIAQLTGVEKAPLNTKLRSNDDFLLEQSKSHDG 639
GN +G S +D+S SP Q VEK+PL K+RSN+D+LLEQ+KS
Sbjct: 592 GNGVLGSLSHCIDRSKKFDAPLVGQSPSSFQQAEVEKSPLEPKMRSNEDYLLEQTKS--- 648
Query: 640 FIQNNYDPMDDMMSGILKR 658
QN Y+ +DD+M+ ++KR
Sbjct: 649 --QNGYESLDDIMNAMIKR 665
>gi|298103722|emb|CBM42562.1| putative B-type response regulator 19 [Populus x canadensis]
Length = 685
Score = 732 bits (1890), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/691 (58%), Positives = 500/691 (72%), Gaps = 40/691 (5%)
Query: 1 MTAEERMGSAGCEDGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTAL 60
MT E++ GC + FP+GMRVLAVDDDP CLKVLEN LR CQYEVT TNQAVTAL
Sbjct: 1 MTVEDQ---RGCNSVNEKMFPVGMRVLAVDDDPICLKVLENLLRKCQYEVTTTNQAVTAL 57
Query: 61 KMLRENRNNFDLVISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGAC 120
+MLRENRN +DLVISDV+MPDMDGFKLLE VGLEMDLPVIMLS++GD + V KGITHGA
Sbjct: 58 EMLRENRNKYDLVISDVNMPDMDGFKLLELVGLEMDLPVIMLSSHGDKEFVYKGITHGAV 117
Query: 121 DYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNG 180
DYLLKPVR+EELKNIWQHVIRRKK P+DQN NQ+ GAGEG Q STG+ DQNG
Sbjct: 118 DYLLKPVRLEELKNIWQHVIRRKKWYPQDQNGSPNQDKGGDGAGEGEQ-VTSTGSGDQNG 176
Query: 181 KSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPK 240
K NRKRKDQD +E+E +DG++NE+S QKKPRVVW+ ELH+KFV AVNQLG+DKAVPK
Sbjct: 177 KVNRKRKDQD-EEEEGEGEDGNDNEESGNQKKPRVVWSVELHQKFVSAVNQLGLDKAVPK 235
Query: 241 KILDLMNVEGLTRENVASHLQKFRLYLKRLS-NETPQAGMVAALGSKDSSYLRIGALDGF 299
KILDLMNV+GLTRENVASHLQKFRLYLKRLS Q MVAA G+KDSSYLR+G+LDGF
Sbjct: 236 KILDLMNVDGLTRENVASHLQKFRLYLKRLSCGANQQPNMVAAFGAKDSSYLRMGSLDGF 295
Query: 300 GDLRSLNSPGRLSSSAISSSYVPGNMFGRFNSTSGLSMHGIASSGMIQPGHSQSFNTSFN 359
GD RS++ PG+LS++++ SSY PG++ GR NS GL++ GIAS G++QPGHS+S N N
Sbjct: 296 GDFRSVHGPGQLSTTSL-SSYPPGSLLGRLNSPGGLTLQGIASPGLLQPGHSRSLNNPLN 354
Query: 360 TIGKIQQAMFPANRIS-NLFQGVRTSSELNQLPQSKSTTQIGDFNHINSPTTSMAATGFT 418
T+GK+Q + NR S NLFQG+ ++ + + Q KS IGDFNH T+ A F
Sbjct: 355 TLGKLQPCLLQTNRGSTNLFQGISSALDPKEF-QLKSMNHIGDFNHKGDATSFTLAGCFP 413
Query: 419 DATVAVGSSSSSVSTSSSNIMMLQGNLHQAHSRDAYGNQSSLSVASLNQESFDVGVRNSS 478
D V +GS +++S++++N ML N Q +R + QSSLS+ +LNQESFDVGVR SS
Sbjct: 414 DVKVTIGSLGNTISSAANNPQMLHVNPQQNQTRRSLATQSSLSMPALNQESFDVGVRGSS 473
Query: 479 NFLDHSRCNESWQDAVQLS---SNSLPLSEPFIHDQMPPNL-RNTLSSTSC------LDI 528
NFLDHSRC+++WQ VQ+S SNSLPL EPF HD +PP+ R+ +SST+ LD
Sbjct: 474 NFLDHSRCDDNWQGVVQMSTFPSNSLPLGEPFRHDPLPPSTRRDNISSTTSHIVNNPLDF 533
Query: 529 SSSMATSTHLEDSRGDLSCQPGLIGNVIQ--NYTSKQQWLEHKQGYNQNLNNPFSNVNTL 586
SSS + + LEDSR D+ Q L+GN+ NYTSK +W E+ Q +N LN F N+L
Sbjct: 534 SSSGSLTAPLEDSRLDMQGQADLVGNIFHNTNYTSKNRWGENSQNFNPCLNGSFGATNSL 593
Query: 587 LSGNCTMGPFSQSMD-----------QSNSPYIAQLTGVEKA-----PLNT---KLRSND 627
+SG+ +M P SQSMD QSNS ++ +E P K+RSN+
Sbjct: 594 VSGSGSMNPLSQSMDQRKRFDASVLGQSNSGTLSMFQHLEAGNSALDPTGMRIPKMRSNE 653
Query: 628 DFLLEQSKSHDGFIQNNYDPMDDMMSGILKR 658
DFLLEQ+KS +GF+QNNYD +DD+++ ++KR
Sbjct: 654 DFLLEQTKSPNGFVQNNYDSLDDIVNAMIKR 684
>gi|356556600|ref|XP_003546612.1| PREDICTED: two-component response regulator ARR12-like [Glycine
max]
Length = 697
Score = 722 bits (1864), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/696 (55%), Positives = 493/696 (70%), Gaps = 35/696 (5%)
Query: 13 EDGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDL 72
ED D+FP+GMRVLAVDDDP CLKVLEN LR CQY VT TNQAV ALKMLRENRN FDL
Sbjct: 8 EDEGCDRFPVGMRVLAVDDDPICLKVLENLLRKCQYHVTTTNQAVEALKMLRENRNKFDL 67
Query: 73 VISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEEL 132
VISDV+MPD+DGFKLLE VGLEMDLPVIMLSA+GDTKLVMKG+THGACDYLLKPVRIEEL
Sbjct: 68 VISDVNMPDIDGFKLLELVGLEMDLPVIMLSAHGDTKLVMKGVTHGACDYLLKPVRIEEL 127
Query: 133 KNIWQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGD 192
KNIWQHV+RRK +DQNK N+E + AGEG QG S ++DQN + +KRKDQ +
Sbjct: 128 KNIWQHVVRRKNFDSRDQNKASNEEKAPNIAGEGSQGLRSENSADQNKRLGKKRKDQSEE 187
Query: 193 EDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLT 252
E+EDG+++G + + S QKKPRVVW+ ELHRKFV AVNQLG+DKAVPKKILDLMNVEGLT
Sbjct: 188 EEEDGEENGDDEDPS-AQKKPRVVWSVELHRKFVAAVNQLGLDKAVPKKILDLMNVEGLT 246
Query: 253 RENVASHLQKFRLYLKRLSNETPQAGMVAALGSKDSSYLRIGALDGFGDLRSLNSPGRLS 312
RENVASHLQK+RLYLK+ + QA MVAALG D SYLR+G++DG+GD + + GR++
Sbjct: 247 RENVASHLQKYRLYLKKAAQ---QANMVAALGGSD-SYLRMGSIDGYGDFCTSSGSGRIT 302
Query: 313 SSAISSSYVPGNMFGRFNSTSGLSMHGIASSGMIQPGHSQSFNTSFNTIGKIQQAMFPAN 372
++ S SY +F R NS + L+M I+SS +I+P SQ+ N S NT+G IQ ++FPAN
Sbjct: 303 NTT-SPSYASTGIFSRLNSPAALNMRAISSSALIRPVQSQNINCSLNTLGNIQPSVFPAN 361
Query: 373 RISNLFQGVRTSSELNQLPQSKSTTQIGDFNHINSPTTSMAATGFTDATVAVGSSSSSVS 432
S+L QG+ TS ELNQ QS TT I + ++S ++ A+GF D+ V ++S+
Sbjct: 362 HSSSLLQGIPTSIELNQSKQSNCTTGISQLSQVDSSGFAV-ASGFPDSRATVNGPNNSLP 420
Query: 433 TSSSNIMMLQGNLHQAHSRDAYGNQSSLSVASLNQESFDVGVRNSSNFLDHSRCNESWQD 492
S+N +MLQGN Q H A+ NQSS+ ASL ESFD G+ +SSN LD++RCNE+WQ+
Sbjct: 421 CVSNNHIMLQGNPQQMHGPGAFRNQSSVRAASLCAESFDAGLCSSSNLLDYNRCNENWQN 480
Query: 493 AVQLS---SNSLPLSEPFIHDQMPPNLRNTLSS-----TSCLDISSSMATSTHLEDSRGD 544
A QLS ++SLPL E F +DQ+PP N +S S +D SS M S LED+R +
Sbjct: 481 AAQLSKFPAHSLPLCEAFSNDQLPPTRINVSNSRTHIVNSPVDFSSRMGISVPLEDTRNE 540
Query: 545 LSCQPGLIGNVIQ--NYTSKQQWLEHKQGYNQNLNNPFSNVNTLLSGNCTMGPFSQSMDQ 602
L+CQ GLIGN+++ +YT +Q+W EHK YNQN+ + F+ VN+ S + ++Q
Sbjct: 541 LACQEGLIGNIVKPSSYTPQQRWEEHKLDYNQNVGHSFNPVNSHASSSGVKSSMGHGLNQ 600
Query: 603 SN------------------SPYIAQLTGVEKAPLNTKLRSNDDFLLEQSKSHDGFIQNN 644
+N SP I++ T VEK + +L+ N+ ++LEQ KS DGF+QN
Sbjct: 601 NNTICSNRVDASLVGQLNGASPSISRCTEVEKFSSDIRLKPNEAYILEQMKSQDGFMQNT 660
Query: 645 YDPMDDMMSGILKRDSNETILMDGELGFDAYSLSSC 680
+ +DD+M ++KR+ NE L+DGE+GFDAY + SC
Sbjct: 661 FGTLDDIMGAMVKREQNELTLLDGEMGFDAYPVGSC 696
>gi|356530639|ref|XP_003533888.1| PREDICTED: two-component response regulator ARR12-like [Glycine
max]
Length = 676
Score = 691 bits (1783), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/676 (55%), Positives = 478/676 (70%), Gaps = 38/676 (5%)
Query: 13 EDGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDL 72
EDG D+FP+GMRVLAVDDDP CLKVLEN LR CQY VT TNQAV AL MLRENRN FDL
Sbjct: 8 EDGGCDRFPVGMRVLAVDDDPICLKVLENLLRKCQYHVTTTNQAVEALTMLRENRNKFDL 67
Query: 73 VISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEEL 132
VISDV+MPD+DGFKLLE VGLEMDLPVIMLSA+GDTKLVMKG+THGACDYLLKPVRIEEL
Sbjct: 68 VISDVNMPDIDGFKLLELVGLEMDLPVIMLSAHGDTKLVMKGVTHGACDYLLKPVRIEEL 127
Query: 133 KNIWQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGD 192
KNIWQHV+RRK +DQNK N+E + AG G QG S ++DQN + +KRKDQ +
Sbjct: 128 KNIWQHVVRRKNFDSRDQNKASNEEKAPNFAGGGSQGLRSENSADQNKRLGKKRKDQSDE 187
Query: 193 EDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLT 252
E+E G+++ + + S QKK RVVW+ ELHRKFV AVNQLG+DKAVPKKILDLMNVEGLT
Sbjct: 188 EEEGGEENEDDEDPS-AQKKARVVWSVELHRKFVAAVNQLGLDKAVPKKILDLMNVEGLT 246
Query: 253 RENVASHLQKFRLYLKRLSNETPQAGMVAALGSKDSSYLRIGALDGFGDLRSLNSPGRLS 312
RENVASHLQK+RLYLK+ + QA MVAALG D SYLRIG++DG+GD + + GR++
Sbjct: 247 RENVASHLQKYRLYLKKAAQ---QANMVAALGGSD-SYLRIGSIDGYGDFCTSSGSGRIT 302
Query: 313 SSAISSSYVPGNMFGRFNSTSGLSMHGIASSGMIQPGHSQSFNTSFNTIGKIQQAMFPAN 372
++ + SY +F R NS + L+M GI+SS +I+P SQ+ N+S NT+G IQ ++FPAN
Sbjct: 303 NATL-PSYASTGIFSRLNSPAALNMRGISSSALIRPVQSQNINSSLNTLGNIQPSIFPAN 361
Query: 373 RISNLFQGVRTSSELNQLPQSKSTTQIGDFNHINSPTTSMAATGFTDATVAVGSSSSSVS 432
+ S+L QG+ TS ELNQ Q TT I + ++S ++ A+GF D V ++S+
Sbjct: 362 QSSSLLQGIPTSIELNQSKQRNCTTGISQLSQVDSSGFTV-ASGFPDHRATVNGPNNSLP 420
Query: 433 TSSSNIMMLQGNLHQAHSRDAYGNQSSLSVASLNQESFDVGVRNSSNFLDHSRCNESWQD 492
S+N +MLQGN Q H A+ NQSS+ ASL ESFDVG+ SSN LDH+RCN++WQ+
Sbjct: 421 CVSNNHIMLQGN-PQTHGPGAFSNQSSVRAASLCAESFDVGLCGSSNLLDHNRCNDNWQN 479
Query: 493 AVQLS---SNSLPLSEPFIHDQMPP-NLRNTLSST-----SCLDISSSMATSTHLEDSRG 543
A QLS +NSLPL E F +DQ+PP ++ ++ SST S +D SS M S LED+R
Sbjct: 480 AAQLSKFPANSLPLCEAFSNDQLPPTSINDSNSSTHIGNNSPVDFSSRMGISVPLEDTRN 539
Query: 544 DLSCQPGLIGNVIQ--NYTSKQQWLEHKQGYNQNLNNPFSNVNTLLSGNCTMGPFSQSMD 601
+L CQ GLIGN++Q +YT +Q+W EHK YNQN++ PF++VN+ S + ++
Sbjct: 540 ELRCQEGLIGNIVQPSSYTPRQRWEEHKLDYNQNMSCPFNSVNSHASSSGVTSSMGHVLN 599
Query: 602 QSN-------------------SPYIAQLTGVEKAPLNTKLRSNDDFLLEQSKSHDGFIQ 642
Q+N SP I++ T VEK + +L+ N+ ++LEQ KS DGF+Q
Sbjct: 600 QNNTICSNRVDASSLVGQLNGASPSISRCTEVEKFSSDIRLKPNEAYILEQMKSQDGFMQ 659
Query: 643 NNYDPMDDMMSGILKR 658
N + +DD+M ++KR
Sbjct: 660 NTFGTLDDIMGVMVKR 675
>gi|297735895|emb|CBI18671.3| unnamed protein product [Vitis vinifera]
Length = 655
Score = 688 bits (1775), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/709 (52%), Positives = 462/709 (65%), Gaps = 118/709 (16%)
Query: 1 MTAEERMGSAGCEDGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTAL 60
MT EER G EDG D FP+GMRVLAVDDDPTCL +L+ LR CQY+VT TNQA+TAL
Sbjct: 1 MTVEERKGGLAGEDGVKDPFPVGMRVLAVDDDPTCLMLLDGLLRRCQYQVTTTNQAITAL 60
Query: 61 KMLRENRNNFDLVISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGAC 120
KMLREN+NNFDLVISDV MPDMDGFKLLE VGLEMDLPVIMLS++ D KLVM+GITHGAC
Sbjct: 61 KMLRENKNNFDLVISDVSMPDMDGFKLLELVGLEMDLPVIMLSSHSDPKLVMRGITHGAC 120
Query: 121 DYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNG 180
DYLLKPVRIEELKNIWQHVIRRKK+ KDQNK +Q+N+
Sbjct: 121 DYLLKPVRIEELKNIWQHVIRRKKIDSKDQNKSADQDNALHA------------------ 162
Query: 181 KSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPK 240
DG ENED ++QKKPRVVW+ ELHRKFV AVNQLG++KAVPK
Sbjct: 163 -------------------DGEENEDPSSQKKPRVVWSVELHRKFVAAVNQLGIEKAVPK 203
Query: 241 KILDLMNVEGLTRENVASHLQKFRLYLKRLSN-ETPQAGMVAALGSKDSSYLRIGALDGF 299
+ILDLMNVEGLTRENVASHLQK+RLYLKR+S T QA MVAA G+KDSSY+R+G+LDGF
Sbjct: 204 RILDLMNVEGLTRENVASHLQKYRLYLKRISCVATQQANMVAAFGAKDSSYMRMGSLDGF 263
Query: 300 GDLRSLNSPGRLSSSAISSSYVPGNMFGRFNSTSGLSMHGIASSGMIQPGHSQSFNTSFN 359
GH+Q+ + S N
Sbjct: 264 -------------------------------------------------GHAQNSSNSVN 274
Query: 360 TIGKIQQAMFPANRISNLFQGVRTSSELNQLPQSKS-TTQIGDFNHINSPTTSMAATGFT 418
T GK+Q + P N+ ++LFQG+ TS EL+QL Q K +TQ G+F+ +++ T A GF
Sbjct: 275 THGKLQPVVLPTNQSASLFQGIPTSLELDQLQQRKCISTQRGEFSSVDNTTVFTTANGFP 334
Query: 419 DATVAVGSSSSSVSTSSSNIMMLQGNLHQAHSRDAYGNQSSLSVASLNQESFDVGVRNSS 478
D+ + V SSS+S+S + SN +MLQ N Q R NQSSL +LN E + +GV SS
Sbjct: 335 DSRMTVHSSSNSLSNAPSNPLMLQSNPQQTLCRGGLANQSSLKAVTLNPEPYTMGVSGSS 394
Query: 479 NFLDHSRCNESWQDAVQLS---SNSLPLSEPFIHDQMPP-NLRNTLSST------SCLDI 528
NFLDH RCNE+WQ A+QLS SNSLPLSEP D + NLR +SST S +D
Sbjct: 395 NFLDHGRCNENWQSALQLSKFPSNSLPLSEPLNCDPLTTNNLREHISSTGSHIRRSPIDF 454
Query: 529 SSSMATSTHLEDSRGDLSCQPGLIGNVIQ--NYTSKQQWLEHKQGYNQNLNNPFSNVNTL 586
S++ + LEDSRG++ CQ GLIGNV+Q NY KQ+W E KQ Y Q+ N+ F +N++
Sbjct: 455 SATSVLAGPLEDSRGEMPCQSGLIGNVVQNINYAPKQRWEEQKQDYTQSSNHVFGTLNSI 514
Query: 587 LSGNCTMGPFSQSMDQSNS--------PYI----------AQLTGVEKAPLNTKLRSNDD 628
+ N MGP + S+DQ+N+ P I Q + VEK+ ++TK+ SN+D
Sbjct: 515 IPANNVMGPLNHSLDQNNAACNRKMDMPLISQSNASSSSLVQHSEVEKSAMDTKMVSNED 574
Query: 629 FLLEQSKSHDGFIQNNYDPMDDMMSGILKRDSNETILMDGELGFDAYSL 677
+LLEQ+KS DG I N+Y+ +DD+MS ++KR+ +ET+LM+GE GFDAYSL
Sbjct: 575 YLLEQTKSQDGLIHNSYESLDDLMSAMIKREHDETMLMNGEFGFDAYSL 623
>gi|449457923|ref|XP_004146697.1| PREDICTED: two-component response regulator ARR12-like [Cucumis
sativus]
gi|449505373|ref|XP_004162449.1| PREDICTED: two-component response regulator ARR12-like [Cucumis
sativus]
Length = 697
Score = 657 bits (1696), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/711 (52%), Positives = 475/711 (66%), Gaps = 46/711 (6%)
Query: 1 MTAEERMGSAGCEDGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTAL 60
MT E + +DG D FP+GMRVLAVDDDP CLKVLE+ LR CQY VT T Q++ AL
Sbjct: 1 MTVEGHSVAVVGDDGATDHFPVGMRVLAVDDDPICLKVLESLLRKCQYHVTTTKQSIEAL 60
Query: 61 KMLRENRNNFDLVISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGAC 120
+MLRENRN FDLVISDV+MPDMDGFKLLE VGLEMDLPVIMLSA+ DT+LVMKGI HGAC
Sbjct: 61 RMLRENRNKFDLVISDVNMPDMDGFKLLELVGLEMDLPVIMLSAHSDTELVMKGIAHGAC 120
Query: 121 DYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNG 180
DYLLKPVRIEELKNIWQHVIRRKK+ PK +NK +Q + G E QG T N+D +
Sbjct: 121 DYLLKPVRIEELKNIWQHVIRRKKLEPKAKNKFPSQNKVQNGGNEVEQGFSPTSNAD-SA 179
Query: 181 KSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPK 240
K NRKRKDQD D+D++G ++G +++D + QKKPRVVW+ ELHRKFV AVNQLG++KAVPK
Sbjct: 180 KFNRKRKDQDDDDDDEGKENGLDSDDPSNQKKPRVVWSVELHRKFVSAVNQLGLEKAVPK 239
Query: 241 KILDLMNVEGLTRENVASHLQKFRLYLKRLSN-ETPQAGMVAALGSKDSSYLRIGALDGF 299
KILDLMNVEGLTRENVASHLQK+RLYLKR+SN + QA MVA GSKD +Y+R+G+LDG+
Sbjct: 240 KILDLMNVEGLTRENVASHLQKYRLYLKRISNVASQQANMVATFGSKDGTYMRMGSLDGY 299
Query: 300 GDLRSLNSPGRLSSSAISSSYVPGNMFGRFNSTSGLSMHGIASSGMIQPGHSQSFNTSFN 359
GDL GRL +S++ SSY P M GR NS +G+S+ GI SSG+IQ +SQ+ N + N
Sbjct: 300 GDLHGFAGSGRLPNSSL-SSYSPVGMLGRLNSPAGMSLRGITSSGLIQQ-NSQNLNCAIN 357
Query: 360 TIGKIQ-QAMFPANRISNLFQGVRTSSELNQLPQSKSTTQIGDFNHINSPTTSMAATGFT 418
+GK+Q M N+ +NL QG+ TS E+ QL SKSTT IGDFN +N + F
Sbjct: 358 NLGKLQPTTMLSPNQTTNLLQGIPTSLEIGQLQHSKSTTSIGDFNTMNDTSGFGVPNSFP 417
Query: 419 DATVAVGSSSSSVSTSSSNIMMLQGNLHQAHSRDAYGNQSSLSVASLNQESFDVGVRNSS 478
+ +G+S+ SVS + +MLQG + YGNQ+SL V LN E+FD+ V S
Sbjct: 418 ETRANIGNSTYSVSPAP---LMLQGTI------PTYGNQTSLRVDPLNGETFDIDV-GGS 467
Query: 479 NFLDHSRCNESWQDAVQL---SSNSLPLSEPFIHDQMPPNLRNTLSSTS------CLDIS 529
NFLD N +WQ A L S+ SL +E + DQ+ ++ + +SST +D S
Sbjct: 468 NFLDPDPSNGNWQGAAHLSRFSATSLTTNEAYPSDQL-HSMNSVISSTPSTIGNISVDFS 526
Query: 530 SSMATSTHLEDSRGDLSCQPGLIGNVIQ--NYTSKQQWLEHKQGYNQNLNNPFSNVNTLL 587
S A S L DSR D+ CQ G++G+VIQ N KQ W EHK + +N+ + +N+L+
Sbjct: 527 SRSAGSASLLDSR-DVQCQTGVVGSVIQSMNTMPKQSWEEHKHDFGRNVQHNLGAINSLV 585
Query: 588 SGNCTMGPFSQSMDQSN------------------SPYIAQLTGVEKAPLNTKLRSNDDF 629
+ + P +QS +Q+ S Q VEK NTK + ++
Sbjct: 586 ASDGNPTPLNQSFNQNGVVRDRKVGSSLIVPSNVASLSFPQHGVVEKLGPNTKTNVDGNY 645
Query: 630 LLEQSKSHDGFIQNNYDPMDDMMSGILKRDSNETILMDGELGFDAYSLSSC 680
LL Q KSHDG IQ +++ +DD+M+ I+KR+ NE M+GE GFD +SL SC
Sbjct: 646 LLNQMKSHDGSIQGSFESLDDIMNSIIKREQNEIPEMNGEFGFDHFSLGSC 696
>gi|225430376|ref|XP_002282928.1| PREDICTED: two-component response regulator ARR12-like [Vitis
vinifera]
Length = 693
Score = 575 bits (1481), Expect = e-161, Method: Compositional matrix adjust.
Identities = 349/714 (48%), Positives = 463/714 (64%), Gaps = 54/714 (7%)
Query: 1 MTAEERMGSAGCEDGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTAL 60
MT E R+ ED + D+FPIGMRVLAVDDDPTCL++L+ LR CQY VT T+QA+TAL
Sbjct: 1 MTVEPRV-----EDPN-DQFPIGMRVLAVDDDPTCLRLLDTLLRRCQYHVTTTSQAITAL 54
Query: 61 KMLRENRNNFDLVISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGAC 120
KMLREN+N FDLVISDVHMPDMDGFKLLE VGLEMDLPVIMLSA D KLVMKGITHGAC
Sbjct: 55 KMLRENKNQFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSANDDPKLVMKGITHGAC 114
Query: 121 DYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNG 180
DYLLKPVRIE+LKNIWQHVIRR++ P+DQN + + R G GEGGQG+ GN D +G
Sbjct: 115 DYLLKPVRIEQLKNIWQHVIRRRRFDPRDQNN-SDSRDKRQGPGEGGQGSSEPGNPD-HG 172
Query: 181 KSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPK 240
K N+KRKDQ+ D+DE+ D++GH+NED ++QKKPRVVW+ ELHRKFV AVNQLG+D+AVPK
Sbjct: 173 KLNKKRKDQNEDDDEENDENGHDNEDPSSQKKPRVVWSVELHRKFVAAVNQLGIDRAVPK 232
Query: 241 KILDLMNVEGLTRENVASHLQKFRLYLKRLSN-ETPQAGMVAALGSKDSSYLRIGALDGF 299
KILDLMNVE LTRENVASHLQK+RLYLKR+S QA MVAALGS DS+YL +L+G
Sbjct: 233 KILDLMNVEKLTRENVASHLQKYRLYLKRISCVANQQANMVAALGSTDSTYLH--SLNGL 290
Query: 300 GDLRSLNSPGRLSSSAISSSYVPGNMFGRFNSTSGLSMHGIASSGMIQPGHSQSFNTSFN 359
G+ +L+ G+L +S S+ P M GR N+ SG+ MH ++SS M+Q GH Q+ + N
Sbjct: 291 GNFYNLSGSGQLPNSTF-RSFPPSGMLGRLNTPSGMGMHCLSSSEMVQLGHLQNSSNPIN 349
Query: 360 TIGKIQQAMFPANRISNLFQGVRTSSELNQLPQSKSTTQIGDFN-HINSPTTSMAATGFT 418
+ GK Q + P N+ + QG+ S EL QL +K ++G+ + I T A++GF
Sbjct: 350 SGGKFQPVLLPGNQNGIILQGMPMSLELEQLQHNKGIIRVGELSTTIGDSTVFPASSGFP 409
Query: 419 DATVAVGSSSSSVSTSSSNIMMLQGNLHQAHSRDAYGNQSSLSVASLNQESFDVGVRNSS 478
D + SSSS+ ++++ +MLQG+ + R NQ+S ++ LN E S
Sbjct: 410 DTKMTSSRSSSSLLVAANSPLMLQGHSQENQRRGGLRNQNSATL--LNAEL-------PS 460
Query: 479 NFLDHSRCNESWQDAVQ---LSSNSLPLSEPFIHDQM-PPNLRNTLSS------TSCLDI 528
+F DH RCN++W AVQ + S+S PLS+ F + P NLR+ +SS T+ D+
Sbjct: 461 SFPDHGRCNDNWSTAVQPSAIQSSSFPLSDCFKQATLHPSNLRDNISSVTLQSGTNLRDV 520
Query: 529 SSSMATSTHLEDSRGDLSCQPGLIGN---VIQNYTSKQQWLEHKQGYNQNLNNPFSNVNT 585
S + L DSR DL CQ I + I NY+ K W +HK + + + S+ N+
Sbjct: 521 SCVTSMPPPLPDSRTDLECQAMTISSNSVKIMNYSPK-VWDDHKHKLSHHSSLGCSSANS 579
Query: 586 LLSGNCTMGPFSQSMDQSNS------------------PYIAQLTGVEKAPLNTKLRSND 627
L+ MG F Q +D N+ P Q VE++ +T L+
Sbjct: 580 LIPAPGVMGTFDQGLDLKNTISDRNMDFNLMGESNFVNPLPMQQNAVEESASDTALQLKQ 639
Query: 628 DFLLEQSKSHDGFIQNNYDPMDDMMSGILKRDSNETILMDGELGFDAYSLSSCM 681
L Q K + NN ++D++S ++K++ ++T LM+G+LG+DAYSL +C+
Sbjct: 640 GCTLGQRKPQSSYASNNVGSLEDLVSAMMKQEQDKTTLMEGDLGYDAYSLGTCL 693
>gi|255548782|ref|XP_002515447.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
gi|223545391|gb|EEF46896.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
Length = 663
Score = 555 bits (1431), Expect = e-155, Method: Compositional matrix adjust.
Identities = 341/694 (49%), Positives = 430/694 (61%), Gaps = 68/694 (9%)
Query: 1 MTAEERMGSAGCEDGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTAL 60
MT E+ G A D+FPIGMRVLAVDDDPTCL VLE FLR CQY VT T+QA++AL
Sbjct: 1 MTVEQGAGEAK------DQFPIGMRVLAVDDDPTCLLVLETFLRRCQYHVTTTSQAISAL 54
Query: 61 KMLRENRNNFDLVISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGAC 120
KMLREN+N FDLVISDVHMPDMDGFKLLE VGLEMDLPVIMLSAY D KLVMKGITHGAC
Sbjct: 55 KMLRENKNKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSAYSDPKLVMKGITHGAC 114
Query: 121 DYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNG 180
DYLLKPVRIEELKNIWQHVIRRKKV KDQN NQ+ G+GE +DQ
Sbjct: 115 DYLLKPVRIEELKNIWQHVIRRKKVDNKDQNNFDNQDKLPRGSGE--------ATADQ-- 164
Query: 181 KSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPK 240
K N+KRKDQ+ DEDED D+ GHENED TTQKKPRVVW+ ELHRKFV AVNQLGVDKAVPK
Sbjct: 165 KLNKKRKDQNEDEDEDRDEHGHENEDPTTQKKPRVVWSVELHRKFVAAVNQLGVDKAVPK 224
Query: 241 KILDLMNVEGLTRENVASHLQKFRLYLKRLSN-ETPQAGMVAALGSKDSSYLRIGALDGF 299
KILDLMNVE LTRENVASHLQK+RLYLKR+S QA MVAALGS D+SYL++G+ GF
Sbjct: 225 KILDLMNVEKLTRENVASHLQKYRLYLKRISTVANQQANMVAALGSSDASYLQMGSGLGF 284
Query: 300 GDLRSLNSPGRLSSSAISSSYVPGNMFGRFNSTSGLSMHGIASSGMIQPGHSQSFNTSFN 359
+ + G+ ++ P M GR NS +GL M G+ S G+IQ G Q S N
Sbjct: 285 ---QGIAGAGQFHNATF-RPLPPSGMLGRLNSPAGLGMRGLPSPGVIQLGQLQGTGHSSN 340
Query: 360 TIGKIQQAMFPANRISNLFQGVRTSSELNQLPQSKSTTQIGDF-NHINSPTTSMAATGFT 418
Q A+ P N N+ QG+ TS EL+Q+ +K T I + IN T + GF+
Sbjct: 341 NQSHFQMAVHPGN-AGNVLQGMPTSLELDQIQSNKGVTYIRELPTDINDATAFSVSGGFS 399
Query: 419 DATVAVGSSSSSVSTSSSNIMMLQGNLHQAHSRDAYGNQSSLSVASLNQESFDVGVRNSS 478
D + VGSS+SS +S+ +ML+GN A +G SSL+VASL D G SS
Sbjct: 400 DTKIMVGSSNSSFLGASNKPLMLEGNTQGAQDGKEFGKHSSLTVASL-----DSGF--SS 452
Query: 479 NFLDHSRCNESWQDAVQ---LSSNSLPLSEPFIHDQMPP-NLRNTLSS------TSCLDI 528
+ D RCN++W AVQ + S S L++ F + P N R+++S+ + DI
Sbjct: 453 HLPDPGRCNDNWSSAVQSNGVQSTSFALNDCFRQTTLHPNNSRDSMSTMGLQNGNNAPDI 512
Query: 529 SSSMATSTHLEDSRGDLSCQPGLI----GNVIQNYTSKQQWLEHKQGYNQNLNNPFSNVN 584
SS HL++S+ DL CQ I G +I N + Q W + +Q + N S+VN
Sbjct: 513 SSISTLPIHLQESKADLQCQITSIRSNAGQIINN--APQGWDDQRQDSMYHSNAVHSSVN 570
Query: 585 TL--LSGNCTMGPFSQSMDQSNSPY------------------IAQLTGVEKAPLNTKLR 624
T + G T+ S+D N+ + + + VE + +R
Sbjct: 571 TANPIPGTGTL--MGHSLDPKNTIFHRTTSFNSTRQTNFIDMPLMKHNDVENLSMEILMR 628
Query: 625 SNDDFLLEQSKSHDGFIQNNYDPMDDMMSGILKR 658
SN+ +++ Q K ++ +N+ ++D+ + ++K+
Sbjct: 629 SNEGYVMAQQKLQSSYVSDNFGSLEDLANVMVKQ 662
>gi|296082079|emb|CBI21084.3| unnamed protein product [Vitis vinifera]
Length = 667
Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust.
Identities = 342/713 (47%), Positives = 452/713 (63%), Gaps = 78/713 (10%)
Query: 1 MTAEERMGSAGCEDGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTAL 60
MT E R+ ED + D+FPIGMRVLAVDDDPTCL++L+ LR CQY VT T+QA+TAL
Sbjct: 1 MTVEPRV-----EDPN-DQFPIGMRVLAVDDDPTCLRLLDTLLRRCQYHVTTTSQAITAL 54
Query: 61 KMLRENRNNFDLVISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGAC 120
KMLREN+N FDLVISDVHMPDMDGFKLLE VGLEMDLPVIMLSA D KLVMKGITHGAC
Sbjct: 55 KMLRENKNQFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSANDDPKLVMKGITHGAC 114
Query: 121 DYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNG 180
DYLLKPVRIE+LKNIWQHVIRR++ P+DQN + + R G GEGGQG+ GN D +G
Sbjct: 115 DYLLKPVRIEQLKNIWQHVIRRRRFDPRDQNN-SDSRDKRQGPGEGGQGSSEPGNPD-HG 172
Query: 181 KSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPK 240
K N+KRKDQ+ D+DE+ D++GH+NED ++QKKPRVVW+ ELHRKFV AVNQLG+D+AVPK
Sbjct: 173 KLNKKRKDQNEDDDEENDENGHDNEDPSSQKKPRVVWSVELHRKFVAAVNQLGIDRAVPK 232
Query: 241 KILDLMNVEGLTRENVASHLQKFRLYLKRLSN-ETPQAGMVAALGSKDSSYLRIGALDGF 299
KILDLMNVE LTRENVASHLQK+RLYLKR+S QA MVAALGS DS+YL +L+G
Sbjct: 233 KILDLMNVEKLTRENVASHLQKYRLYLKRISCVANQQANMVAALGSTDSTYLH--SLNGL 290
Query: 300 GDLRSLNSPGRLSSSAISSSYVPGNMFGRFNSTSGLSMHGIASSGMIQPGHSQSFNTSFN 359
G+ +L+ G+L +S S+ P M GR N+ SG+ MH ++SS M+Q GH Q+ + N
Sbjct: 291 GNFYNLSGSGQLPNSTF-RSFPPSGMLGRLNTPSGMGMHCLSSSEMVQLGHLQNSSNPIN 349
Query: 360 TIGKIQQAMFPANRISNLFQGVRTSSELNQLPQSKSTTQIGDFNHINSPTTSMAATGFTD 419
+ ++Q +G+ EL +T IGD T A++GF D
Sbjct: 350 KLEQLQHN-----------KGIIRVGEL--------STTIGD------STVFPASSGFPD 384
Query: 420 ATVAVGSSSSSVSTSSSNIMMLQGNLHQAHSRDAYGNQSSLSVASLNQESFDVGVRNSSN 479
+ SSSS+ ++++ +MLQG+ + R NQ+S ++ LN E S+
Sbjct: 385 TKMTSSRSSSSLLVAANSPLMLQGHSQENQRRGGLRNQNSATL--LNAEL-------PSS 435
Query: 480 FLDHSRCNESWQDAVQ---LSSNSLPLSEPFIHDQM-PPNLRNTLSS------TSCLDIS 529
F DH RCN++W AVQ + S+S PLS+ F + P NLR+ +SS T+ D+S
Sbjct: 436 FPDHGRCNDNWSTAVQPSAIQSSSFPLSDCFKQATLHPSNLRDNISSVTLQSGTNLRDVS 495
Query: 530 SSMATSTHLEDSRGDLSCQPGLIGN---VIQNYTSKQQWLEHKQGYNQNLNNPFSNVNTL 586
+ L DSR DL CQ I + I NY+ K W +HK + + + S+ N+L
Sbjct: 496 CVTSMPPPLPDSRTDLECQAMTISSNSVKIMNYSPK-VWDDHKHKLSHHSSLGCSSANSL 554
Query: 587 LSGNCTMGPFSQSMDQSNS------------------PYIAQLTGVEKAPLNTKLRSNDD 628
+ MG F Q +D N+ P Q VE++ +T L+
Sbjct: 555 IPAPGVMGTFDQGLDLKNTISDRNMDFNLMGESNFVNPLPMQQNAVEESASDTALQLKQG 614
Query: 629 FLLEQSKSHDGFIQNNYDPMDDMMSGILKRDSNETILMDGELGFDAYSLSSCM 681
L Q K + NN ++D++S ++K++ ++T LM+G+LG+DAYSL +C+
Sbjct: 615 CTLGQRKPQSSYASNNVGSLEDLVSAMMKQEQDKTTLMEGDLGYDAYSLGTCL 667
>gi|147863919|emb|CAN81109.1| hypothetical protein VITISV_010435 [Vitis vinifera]
Length = 693
Score = 540 bits (1391), Expect = e-151, Method: Compositional matrix adjust.
Identities = 336/691 (48%), Positives = 442/691 (63%), Gaps = 54/691 (7%)
Query: 1 MTAEERMGSAGCEDGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTAL 60
MT E R+ ED + D+FPIGMRVLAVDDDPTCL++L+ LR CQY VT T+QA+TAL
Sbjct: 1 MTVEPRV-----EDPN-DQFPIGMRVLAVDDDPTCLRLLDTLLRRCQYHVTTTSQAITAL 54
Query: 61 KMLRENRNNFDLVISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGAC 120
KMLREN+N FDLVISDVHMPDMDGFKLLE VGLEMDLPVIMLSA D KLVMKGITHGAC
Sbjct: 55 KMLRENKNQFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSANDDPKLVMKGITHGAC 114
Query: 121 DYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNG 180
DYLLKPVRIE+LKNIWQHVIRR++ P+DQN + + R G GEGGQG+ GN D +G
Sbjct: 115 DYLLKPVRIEQLKNIWQHVIRRRRFDPRDQNN-SDSRDKRQGPGEGGQGSSEPGNPD-HG 172
Query: 181 KSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPK 240
K N+KRKDQ+ D+DE+ D++GH+NED ++QKKPRVVW+ ELHRKFV AVNQLG+D+AVPK
Sbjct: 173 KLNKKRKDQNEDDDEENDENGHDNEDPSSQKKPRVVWSVELHRKFVAAVNQLGIDRAVPK 232
Query: 241 KILDLMNVEGLTRENVASHLQKFRLYLKRLSN-ETPQAGMVAALGSKDSSYLRIGALDGF 299
KILDLMNVE LTRENVASHLQK+RLYLKR+S QA MVAALGS DS+YL +L+G
Sbjct: 233 KILDLMNVEKLTRENVASHLQKYRLYLKRISCVANQQANMVAALGSTDSTYLH--SLNGL 290
Query: 300 GDLRSLNSPGRLSSSAISSSYVPGNMFGRFNSTSGLSMHGIASSGMIQPGHSQSFNTSFN 359
G+ +L+ G+L +S S+ P M GR N+ SG+ MH ++SS M+Q GH Q+ + N
Sbjct: 291 GNFYNLSGSGQLPNSTF-RSFPPSGMLGRLNTPSGMGMHCLSSSEMVQLGHLQNSSNPIN 349
Query: 360 TIGKIQQAMFPANRISNLFQGVRTSSELNQLPQSKSTTQIGDFN-HINSPTTSMAATGFT 418
+ GK Q + P N+ + QG+ S EL QL +K ++G+ + I T A++GF
Sbjct: 350 SGGKFQPVLLPGNQNGIILQGMPMSLELEQLQHNKGIIRVGELSTTIGDSTVFPASSGFP 409
Query: 419 DATVAVGSSSSSVSTSSSNIMMLQGNLHQAHSRDAYGNQSSLSVASLNQESFDVGVRNSS 478
D + SSSS+ ++++ +MLQG+ + R NQ+S ++ LN E S
Sbjct: 410 DTKMTSSRSSSSLLVAANSPLMLQGHSQENQRRGGLRNQNSATL--LNAEL-------PS 460
Query: 479 NFLDHSRCNESWQDAVQ---LSSNSLPLSEPFIHDQM-PPNLRNTLSS------TSCLDI 528
+F DH RCN++W AVQ + S+S LS+ F + P NLR+ +SS T+ D+
Sbjct: 461 SFPDHGRCNDNWSTAVQPSAIQSSSFLLSDCFKQATLHPSNLRDNISSVTLQSGTNLRDV 520
Query: 529 SSSMATSTHLEDSRGDLSCQPGLIGN---VIQNYTSKQQWLEHKQGYNQNLNNPFSNVNT 585
S + L DSR DL CQ I + I NY+ K W +HK + + + S+ N+
Sbjct: 521 SCVTSMPPPLPDSRTDLECQAMTISSNSVKIMNYSPK-VWDDHKHKLSHHSSLGCSSANS 579
Query: 586 LLSGNCTMGPFSQSMDQSNS------------------PYIAQLTGVEKAPLNTKLRSND 627
L+ MG F Q +D N+ P Q VE++ +T L+
Sbjct: 580 LIPAPGVMGTFDQGLDLKNTISDRNMDFNLMGESNFVNPLPMQQNAVEESASDTALQLKQ 639
Query: 628 DFLLEQSKSHDGFIQNNYDPMDDMMSGILKR 658
L Q K + NN ++D++S ++K+
Sbjct: 640 GCTLGQRKPQSSYASNNVGSLEDLVSAMMKQ 670
>gi|449443269|ref|XP_004139402.1| PREDICTED: two-component response regulator ARR12-like [Cucumis
sativus]
gi|449494037|ref|XP_004159429.1| PREDICTED: two-component response regulator ARR12-like [Cucumis
sativus]
Length = 699
Score = 540 bits (1390), Expect = e-150, Method: Compositional matrix adjust.
Identities = 333/715 (46%), Positives = 448/715 (62%), Gaps = 50/715 (6%)
Query: 1 MTAEERMGSAGCEDGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTAL 60
MT E R + E+ D+++FPIGMRVLAVDDDP CLKVLEN LR CQY VT TNQAV AL
Sbjct: 1 MTVEVRKTNLVGENDDMEQFPIGMRVLAVDDDPICLKVLENLLRKCQYHVTTTNQAVQAL 60
Query: 61 KMLRENRNNFDLVISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGAC 120
KMLREN+N FDLVISDV+MPDMDGFKLLE VGLEMDLPVIMLSA+ +T+LV KG+ HGAC
Sbjct: 61 KMLRENKNRFDLVISDVNMPDMDGFKLLELVGLEMDLPVIMLSAHSNTELVKKGVLHGAC 120
Query: 121 DYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLL--NQENSRVGAGEGGQGAMSTGNSDQ 178
DYLLKPVRIEELKNIWQHV+RRKK K+QNK + N + V +G A+ST N
Sbjct: 121 DYLLKPVRIEELKNIWQHVLRRKKPSVKNQNKSIIGNNTSQSVEVAKGCPPAVSTDNE-- 178
Query: 179 NGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWT---PELHRKFVGAVNQLGVD 235
KS +++KDQD DE+ +D +EN+DS+TQKKPRV W LHRKFV AVN LG +
Sbjct: 179 --KSGKRQKDQDDDEEGGEEDSTYENDDSSTQKKPRVNWYDGDENLHRKFVAAVNILGYE 236
Query: 236 KAVPKKILDLMNVEGLTRENVASHLQKFRLYLKRL-SNETPQAGMVAALGSKDSSYLRIG 294
KAVPKKILDLMNVEGLTRENVASHLQK+R YLK+L S E+ Q + A G +S+ +
Sbjct: 237 KAVPKKILDLMNVEGLTRENVASHLQKYRQYLKKLCSEESEQCNKMGAFGGTHTSFRPMA 296
Query: 295 ALDGFGDLRSLNSPGRLSSSAISSSYVPGNMFGRFNSTSGLSMHGIASSGMIQPGHSQSF 354
+LDGF S+ GRLS++ S Y + G+ NST+GLS++ IASSGMIQ S
Sbjct: 297 SLDGF----SMTGTGRLSNATF-SQYPSREIVGQLNSTAGLSLNDIASSGMIQ---SHKL 348
Query: 355 NTSFNTIGKIQQAMFPANRISNLFQGVRTSSELNQLPQSKSTTQIGDFNHINSPTTSMAA 414
+ S + IGK F N+ + F G+ S + QL + K T + N IN ++ +
Sbjct: 349 SNSLSFIGKPHPPFFHTNQPPHTFNGISMSLDHIQLHRDKRTLSFKESNLINDASSFTVS 408
Query: 415 TGFTDATVAVGSSSSSVSTSSSNIMMLQGNLHQAHSRDAYGNQSSLSVASLNQESFDVGV 474
T F DA AVGSSS+ SS+ +ML+ + Q H +G QSSL + N+E D G
Sbjct: 409 TSFPDAGRAVGSSSNYDFGVSSHSLMLREHKQQIHGDGEFGGQSSLKITLDNREPLDSGT 468
Query: 475 RNSSNFLDHSRCNESWQDAVQLS--SNSLPLSEPFIHDQMPPNLRNTLSSTSCLD----- 527
+ SN L HS+ N++W ++QL S+++ ++ + D MP S+ D
Sbjct: 469 -SVSNILGHSQSNKNWPGSIQLPKFSSNVSVTGIYPPDGMPGTYLTISSAQPDNDNFPVG 527
Query: 528 -ISSSMATSTHLEDSRGDLSCQPGLIGNVIQ--NYTSKQQWLEHKQGYNQNLNNPFSNVN 584
S+S +S+HL D RGD C LIG+V++ N SKQQW KQ Y N ++ +
Sbjct: 528 FPSTSGDSSSHL-DLRGDTQCYEELIGSVVEATNGRSKQQWEAAKQDYYGNHSSVVR--D 584
Query: 585 TLLSGNCTMGPFSQSMDQSNSPYIAQLT-----------------GVEKAPLNTKLRSND 627
+ +SGN P QS +Q+N+ + ++ GVE + +NT + +
Sbjct: 585 SFVSGNSVADPLIQSANQNNAICLGNMSSSSTNQLNIGAPTFIHDGVEISTMNTWMNYDG 644
Query: 628 DFLLEQSKSHDGFIQNNYDPMDDMMSGILKRDSNETILMDGELGFDAYSL-SSCM 681
++Q+K GF ++++ +D++++ + K+D +++I ++GE GFDA SL SSC+
Sbjct: 645 KIPMDQTKLQHGFSSSSFNSLDELVNALSKQDQDQSIQINGEFGFDAQSLGSSCI 699
>gi|224088246|ref|XP_002308388.1| predicted protein [Populus trichocarpa]
gi|222854364|gb|EEE91911.1| predicted protein [Populus trichocarpa]
Length = 437
Score = 526 bits (1355), Expect = e-146, Method: Compositional matrix adjust.
Identities = 287/464 (61%), Positives = 343/464 (73%), Gaps = 43/464 (9%)
Query: 19 KFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVH 78
KFP+GMR+LAVDDDP CLKVLEN LR CQYEVT TNQAVTAL+MLRENRN +DLVISDV+
Sbjct: 16 KFPVGMRILAVDDDPICLKVLENLLRKCQYEVTTTNQAVTALEMLRENRNKYDLVISDVN 75
Query: 79 MPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQH 138
MPDMDGFKLLE VGLEMDLPVIMLS++GD + V KG+THGA DYLLKPVR+EELKNIWQH
Sbjct: 76 MPDMDGFKLLELVGLEMDLPVIMLSSHGDKEFVYKGVTHGAVDYLLKPVRMEELKNIWQH 135
Query: 139 VIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGD 198
VIRRKK P+DQN+ NQ+ GAGEG QG STG++DQNGK NRKRKDQD DEDE+
Sbjct: 136 VIRRKKWYPEDQNRSPNQDKGDDGAGEGEQGVTSTGSADQNGKLNRKRKDQD-DEDEEEG 194
Query: 199 DDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVAS 258
+DG +NE S QKKPRVVW+ +LH+KFV AVNQ+G+DKAVPKKILDLMNV+GLTRENVAS
Sbjct: 195 EDGDDNEVSGNQKKPRVVWSVDLHQKFVAAVNQMGLDKAVPKKILDLMNVDGLTRENVAS 254
Query: 259 HLQKFRLYLKRLSNETPQAG-MVAALGSKDSSYLRIGALDGFGDLRSLNSPGRLSSSAIS 317
HLQKFRLYLKRLS+ Q G MV+A G+KDSSYL++ ++DGFGD RS++ PGRLS++++
Sbjct: 255 HLQKFRLYLKRLSSGGNQQGNMVSAFGAKDSSYLQMSSVDGFGDFRSMHGPGRLSTTSL- 313
Query: 318 SSYVPGNMFGRFNSTSGLSMHGIASSGMIQPGHSQSFNTSFNTIGKIQQAMFPANRISNL 377
SSY G GR NS GL++ GIASSG+ QPG + P N+ +NL
Sbjct: 314 SSYPSGTFLGRLNSPGGLTLQGIASSGLHQPG------------------LLPTNQGTNL 355
Query: 378 FQGVRTSSELNQLPQSKSTTQIGDFNHINSPTTSMAATGFTDATVAVGSSSSSVSTSSSN 437
FQG+ ++ E QL Q KS IG+FN A+ F D V +GS S+++S ++
Sbjct: 356 FQGISSALEPKQL-QMKSINHIGEFNQKGDTAGFTLASCFPDVKVTIGSLSNTISGAT-- 412
Query: 438 IMMLQGNLHQAHSRDAYGNQSSLSVASLNQESFDVGVRNSSNFL 481
QSSLS+ SLNQESFDVGV+ SSNFL
Sbjct: 413 -------------------QSSLSMPSLNQESFDVGVQGSSNFL 437
>gi|356546098|ref|XP_003541468.1| PREDICTED: two-component response regulator ARR12-like [Glycine
max]
Length = 680
Score = 525 bits (1353), Expect = e-146, Method: Compositional matrix adjust.
Identities = 320/691 (46%), Positives = 430/691 (62%), Gaps = 58/691 (8%)
Query: 18 DKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDV 77
D+FP+GMRVLAVDDD TCL VLEN LR CQY VT TNQA+ AL+MLR+NRN FDLVISDV
Sbjct: 5 DRFPVGMRVLAVDDDKTCLTVLENLLRKCQYNVTTTNQAIKALEMLRKNRNKFDLVISDV 64
Query: 78 HMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQ 137
+MPDMDGFKLLE VGLEMDLPVIMLS YGD + VM+G+ GACDYL KPVRIEEL+NIWQ
Sbjct: 65 NMPDMDGFKLLELVGLEMDLPVIMLSGYGDKERVMRGVIQGACDYLTKPVRIEELQNIWQ 124
Query: 138 HVIRRKKVGPKDQN-------------KLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNR 184
HV+RR ++ KD+N K N+E +R AGE Q N+DQN K +
Sbjct: 125 HVLRR-RIDSKDKNKTASEGKGCSMAGKFANEEKARYMAGECSQAMAPKNNTDQNIKLGQ 183
Query: 185 KRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILD 244
KRK+ DE+E+ D +E + QKKPR+VW ELHRKF+ AVN LG+DKA PK+ILD
Sbjct: 184 KRKELSEDEEEEEYDKENEEH--SNQKKPRLVWDAELHRKFLAAVNHLGIDKAFPKRILD 241
Query: 245 LMNVEGLTRENVASHLQKFRLYLKRLSNETPQAGMVAALGSKDSSYLRIGALDGFGDLRS 304
LMNVEGLTRENVASHLQK+RL L++ T Q MVAALGS D YL++ +++GF L
Sbjct: 242 LMNVEGLTRENVASHLQKYRLGLRK---PTQQPSMVAALGSSD-PYLQMDSVEGFRTLSG 297
Query: 305 LNSPGRLSSSAISSSYVPGNMFGRFNSTSGLSMHGIASSGMIQPGHSQSFNTSFNTIGKI 364
S G LS++ SY G +F R N SGL G+ +S + QP SQ+ + S G +
Sbjct: 298 --SVGMLSTTL--PSYASGGVFCRLNPPSGL--RGV-NSALFQPVLSQNNSMSAKAFGNM 350
Query: 365 QQAMFPANRISNLFQGVRTSSELNQLPQSKSTTQIGDFNHINSPTTSMAATGFTDATVAV 424
Q +MF AN+ S+L QG+ TS + N+ Q++S I + ++ + ++GF+D V
Sbjct: 351 QLSMFSANQTSSLLQGIPTSIDANKFQQNRSPG-IRKLSPLDDSSGFKVSSGFSDTRATV 409
Query: 425 GSSSSSVSTSSSNIMMLQGNLHQAHSRDAYGNQSSLSVASLNQESFDVGVRNSSNFLDHS 484
+ ++ V S+N ++LQ N A + A+ N SSL AS+N +SFD G+ LDH+
Sbjct: 410 INPNNFVHDLSNNHLLLQRNSPPAQNSGAFRNHSSLGAASVNTQSFDPGICE----LDHN 465
Query: 485 RCNESWQDAVQLS---SNSLPLSEPFIHDQMPPNLRNTLSSTSC-----LDISSSMATST 536
R N+SWQ Q+S +N+ +S+ F HDQ+ N SST C +D SS+ A +
Sbjct: 466 RHNKSWQGTTQISKFPTNTSAVSKVFTHDQLAQNNLKFSSSTFCSGNSPVDFSSTRAIAP 525
Query: 537 HLEDSRGDLSCQPGLIGNVI--QNYTSKQQWLEHKQGYNQNLNNPFSNVNTLLSGNCTMG 594
LED+RG L Q GL+ N++ YT Q W K+G N++++ F++ + +S N
Sbjct: 526 PLEDARGKLQSQEGLLENILLASCYTQHQSWESDKRGCNKDMSQTFNSTKS-VSPNGDTS 584
Query: 595 PFSQSMDQSNS------------PYIAQLTGVEKAPLNTKLRSNDDFLLEQSKSHDGFIQ 642
S+DQ+NS P I Q EK ++SND +L +S +G +Q
Sbjct: 585 SLGHSLDQNNSVSSEGIGASLVNPSITQSNEGEKF---YSMKSNDACILRSMESQEGLMQ 641
Query: 643 NNYDPMDDMMSGILKRDSNETILMDGELGFD 673
N + ++D+MS I +++ N +LMDGEL FD
Sbjct: 642 NTFGSLNDIMSEITEQEQNTIMLMDGELEFD 672
>gi|449455539|ref|XP_004145510.1| PREDICTED: two-component response regulator ARR12-like [Cucumis
sativus]
Length = 688
Score = 509 bits (1312), Expect = e-141, Method: Compositional matrix adjust.
Identities = 317/714 (44%), Positives = 422/714 (59%), Gaps = 59/714 (8%)
Query: 1 MTAEERMGSAGCEDGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTAL 60
MT E R+ D +D+FP GMRVLAVDDDPTCL +LE LR CQY VT TNQAV AL
Sbjct: 1 MTVESRL------DDPVDQFPTGMRVLAVDDDPTCLLILETLLRRCQYHVTTTNQAVMAL 54
Query: 61 KMLRENRNNFDLVISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGAC 120
K+LREN+N FD+VISDVHMPDMDGFKLLE VGLEMDLPVIMLSA GD KLVMKGITHGAC
Sbjct: 55 KLLRENKNKFDVVISDVHMPDMDGFKLLELVGLEMDLPVIMLSANGDPKLVMKGITHGAC 114
Query: 121 DYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNG 180
DYLLKPVRIEELKNIWQHVIRRKK PKD+ NQ+ GE ++D NG
Sbjct: 115 DYLLKPVRIEELKNIWQHVIRRKKFDPKDRMNSGNQDRPDSENGE--------ESADPNG 166
Query: 181 KSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPK 240
K N+KRKDQ+ +ED+D D G +N+DS+TQKKPRVVW+ ELHRKFV AVNQLG+DKAVPK
Sbjct: 167 KFNKKRKDQNYNEDDD-QDYGQDNDDSSTQKKPRVVWSVELHRKFVNAVNQLGIDKAVPK 225
Query: 241 KILDLMNVEGLTRENVASHLQKFRLYLKRLSN-ETPQAGMVAALGSKDSSYLRIGALDGF 299
KILDLMNVE LTRENVASHLQK+RLYLKR+S QA MV AL S D SYLRIG+L G
Sbjct: 226 KILDLMNVEKLTRENVASHLQKYRLYLKRISCVANQQANMVTALSSADPSYLRIGSLGGI 285
Query: 300 GDLRSLNSPGRLSSSAISSSYVPGNMFGRFNSTSGLSMHGIASSGMIQPGHSQSFNTSFN 359
G+ SL P + +++ S G MFGR NS + + MHG++S G +Q G + + S N
Sbjct: 286 GNFHSLTGPPQFPNTSYRSIPTTG-MFGRLNSPACMGMHGLSSPGTVQLG---NLSNSSN 341
Query: 360 TIGKIQQAMFPANRISNLFQGVRTSSELNQLPQSKSTTQIGDFNHINSPTTSMAATGFTD 419
Q + NR N+F+G+ SE++QL K T + + + T + G +
Sbjct: 342 DQSTFQPIVLSGNRSGNIFRGMPEPSEIDQLQHVKHGTHVDNLSSAFDERTVFPSIGLPN 401
Query: 420 ATVAVGSSSSSVSTSSSNIMMLQGNLHQAHSRDAYGNQSSLSVASLNQESFDVGVRNSSN 479
++ + S+ + +++ + + H+ + +G QSS+SV S N +S R S
Sbjct: 402 GNMSSSTLSNPLLGLTNDPSIPEAQHHEVNGGRKFGTQSSISVVSSNSDS----PRPS-- 455
Query: 480 FLDHSRCN-ESWQDAVQLSS---NSLPLSE-----PFIHDQMPPNLRNTLSSTSCL-DIS 529
LD+ RC ++W +AV S N++P + H Q+ N + L +CL DIS
Sbjct: 456 -LDNVRCTGDNWSNAVHSSRVHLNTIPSANLSNVATSYHGQLRDNTTSALHIGNCLSDIS 514
Query: 530 SSMATSTHLEDSRGDLSCQPGLIGNVIQNYTSK---QQWLEHKQGYNQNLNNPFSNVNTL 586
S + ST +SR D Q N SK Q W +HK+ + S+ N+L
Sbjct: 515 SITSLSTQSHESRIDSQRQAATTSNRFDQLISKVPVQDWNDHKEDAYYHTTMACSSSNSL 574
Query: 587 LSGNCTMGPFSQSMDQSNSPY------------------IAQLTGVEKAPLNTKLRSNDD 628
+ N S+ ++ N+ + + + +K+ + T L
Sbjct: 575 IPVNGAAETLSKRLENPNAIFSGSKDFNATGQANVLDHAMVEHDQFKKSNMETPLMLKQG 634
Query: 629 FLLE-QSKSHDGFIQNNYDPMDDMMSGILKRDSNETILMDGELGFDAYSLSSCM 681
+L + Q K F +N ++D+ ++K++ ++ L++GE G D Y + +CM
Sbjct: 635 YLYDHQQKMQSRFSSSNCGSLEDIACAMMKQEQDDGKLLEGEFGCDNYPIGTCM 688
>gi|449485185|ref|XP_004157093.1| PREDICTED: LOW QUALITY PROTEIN: two-component response regulator
ARR12-like [Cucumis sativus]
Length = 688
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 319/714 (44%), Positives = 422/714 (59%), Gaps = 59/714 (8%)
Query: 1 MTAEERMGSAGCEDGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTAL 60
MT E R+ D +D+FP GMRVLAVDDDPTCL +LE LR CQY VT TNQAV AL
Sbjct: 1 MTVESRL------DDPVDQFPTGMRVLAVDDDPTCLLILETLLRRCQYHVTTTNQAVMAL 54
Query: 61 KMLRENRNNFDLVISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGAC 120
K+LREN+N FD+VISDVHMPDMDGFKLLE VGLEMDLPVIMLSA GD KLVMKGITHGAC
Sbjct: 55 KLLRENKNKFDVVISDVHMPDMDGFKLLELVGLEMDLPVIMLSANGDPKLVMKGITHGAC 114
Query: 121 DYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNG 180
DYLLKPVRIEELKNIWQHVIRRKK PKD+ NQ+ GE ++D NG
Sbjct: 115 DYLLKPVRIEELKNIWQHVIRRKKFDPKDRMNSGNQDRPDSENGE--------ESADPNG 166
Query: 181 KSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPK 240
K N KRKDQ+ +ED+D D G +N+DS+TQKKPRVVW+ ELHRKFV AVNQLG+DKAVPK
Sbjct: 167 KFNXKRKDQNYNEDDD-QDYGQDNDDSSTQKKPRVVWSVELHRKFVNAVNQLGIDKAVPK 225
Query: 241 KILDLMNVEGLTRENVASHLQKFRLYLKRLSN-ETPQAGMVAALGSKDSSYLRIGALDGF 299
KILDLMNVE LTRENVASHLQK+RLYLKR+S QA MV AL S D SYLRIG+L G
Sbjct: 226 KILDLMNVEKLTRENVASHLQKYRLYLKRISCVANQQANMVTALSSADPSYLRIGSLGGI 285
Query: 300 GDLRSLNSPGRLSSSAISSSYVPGNMFGRFNSTSGLSMHGIASSGMIQPGHSQSFNTSFN 359
G+ SL P + +++ S G MFGR NS + + MHG++S G +Q G + + S N
Sbjct: 286 GNFHSLTGPPQFPNTSYRSIPTTG-MFGRLNSPACMGMHGLSSPGTVQLG---NLSNSSN 341
Query: 360 TIGKIQQAMFPANRISNLFQGVRTSSELNQLPQSKSTTQIGDFNHINSPTTSMAATGFTD 419
Q + NR N+F+G+ SE++QL K T + + + T + G +
Sbjct: 342 DQSTFQPIVLSGNRSGNIFRGMPEPSEIDQLQHVKHGTHVDNLSSAFDERTVFPSIGLPN 401
Query: 420 ATVAVGSSSSSVSTSSSNIMMLQGNLHQAHSRDAYGNQSSLSVASLNQESFDVGVRNSSN 479
++ + S+ + +++ + + H+ + +G QSS+SV S N +S R S
Sbjct: 402 GNMSSNTLSNPLLGLTNDPSIPEAQHHEVNGGRKFGTQSSISVVSSNSDS----PRPS-- 455
Query: 480 FLDHSRCN-ESWQDAVQLSS---NSLP---LSE--PFIHDQMPPNLRNTLSSTSCL-DIS 529
LD+ RC ++W +AV S N++P LS H Q+ N + L +CL DIS
Sbjct: 456 -LDNVRCTGDNWSNAVHSSRVHLNTIPSGNLSNVATSYHGQLRDNTTSALHIGNCLSDIS 514
Query: 530 SSMATSTHLEDSRGDLSCQPGLIGNVIQNYTSK---QQWLEHKQGYNQNLNNPFSNVNTL 586
S + ST +SR D Q N SK Q W +HK+ + S+ N+L
Sbjct: 515 SITSLSTQSHESRIDSQRQAATTSNRFDQLISKVPVQDWNDHKEDAYYHTTMACSSSNSL 574
Query: 587 LSGNCTMGPFSQSMDQSNSPY------------------IAQLTGVEKAPLNTKLRSNDD 628
+ N S+ ++ N+ + + + +K+ + T L
Sbjct: 575 IPVNGAAETLSKRLENPNAIFSGSKDFNATGQANVLDHAMVEHDQFKKSNMETPLMLKQG 634
Query: 629 FLLE-QSKSHDGFIQNNYDPMDDMMSGILKRDSNETILMDGELGFDAYSLSSCM 681
+L + Q K F +N ++D+ ++K++ ++ L++GE G D Y + +CM
Sbjct: 635 YLYDHQQKMQSRFSSSNCGSLEDIACAMMKQEQDDGKLLEGEFGCDNYPIGTCM 688
>gi|356554201|ref|XP_003545437.1| PREDICTED: LOW QUALITY PROTEIN: two-component response regulator
ARR12-like [Glycine max]
Length = 681
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 308/681 (45%), Positives = 400/681 (58%), Gaps = 73/681 (10%)
Query: 18 DKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDV 77
D+FPIGMRVLAVDDD TCL VLE LR CQY VT T A+TALK+LREN+ FDLVISDV
Sbjct: 14 DQFPIGMRVLAVDDDSTCLMVLETLLRRCQYHVTTTKNAITALKLLRENKTMFDLVISDV 73
Query: 78 HMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQ 137
HMPDMDGFKLLE VGLEMDLPVIMLS D K+VMKGITHGACDYLLKPVRIEEL+NIWQ
Sbjct: 74 HMPDMDGFKLLELVGLEMDLPVIMLSVNDDPKMVMKGITHGACDYLLKPVRIEELQNIWQ 133
Query: 138 HVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDG 197
HVIRRKK+ K++NK + + G G A TGNSDQNGK ++KRKDQD ++DE+
Sbjct: 134 HVIRRKKIDSKERNKTSDHDKPNADNGNGRVSA-GTGNSDQNGKPSKKRKDQD-EDDEEE 191
Query: 198 DDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVA 257
++DGH+NEDS+T KKPRVVW+ ELHRKFV AVNQLG+DKAVPKKILDLMNVE LTRENVA
Sbjct: 192 NEDGHDNEDSSTLKKPRVVWSVELHRKFVSAVNQLGIDKAVPKKILDLMNVEKLTRENVA 251
Query: 258 SHLQKFRLYLKRLSN-ETPQAGMVAALGSKDSSYLRIGALDGFGDLRSLNSPGRLSSSAI 316
SHLQK+RLYLKR+S QA +VAALG+ DSSYLR+G+L G G +++L P + ++A
Sbjct: 252 SHLQKYRLYLKRISCVANRQANLVAALGTADSSYLRMGSLSGVGHMQTLTGPQQFHNNAF 311
Query: 317 SSSYVPGNMFGRFNSTSGLSMHGIASSGMIQPGHSQSFNTSFNTIGKIQQAMFPANRISN 376
+ PG M GR N++ GL+MHGI+SS +Q H+Q+ N S N K Q A+ N+ N
Sbjct: 312 -RPFPPGGMIGRLNASVGLNMHGISSSEALQLSHAQNLNKSINDPLKFQSAIACGNQ--N 368
Query: 377 LFQGVRTSSELNQLPQSKSTTQIGDFNHINS-----PTTSMAATGFTDAT--VAVGSSSS 429
QG+ S L+QL +K + +G +++S PT ++ +D T V +G S S
Sbjct: 369 GIQGMPMSIGLDQLQHNKGVS-VGPIQNMSSLIDDRPTFGVSKK-LSDQTQKVTIGCSPS 426
Query: 430 SVSTSSSNIMMLQGNLHQAHSRDAYGNQSSLSVASLNQESFDVGVRNSSNFLDHSRCNES 489
V S+N ++L+ + Y N + SVAS + + S LDH RC++
Sbjct: 427 PVLDISNNDLVLKADSENTQGGGVYENLT--SVASQHSQF-------SLPLLDHGRCSDI 477
Query: 490 WQDAVQLS-SNSLPLSEPFIHDQMPPNLRNTLSSTSCLDISSSMATSTH----------- 537
W +Q S +NS P SE NL S TS + S T H
Sbjct: 478 WSSPMQSSGTNSYPPSETL----QGGNLSGQSSITSLFNQSHDSPTDMHSQGLIFTNNLG 533
Query: 538 ----------LEDSRGDLSCQPGLIGNVIQNYTSKQQWLEHKQGYNQNLNNPFSNVNTLL 587
+D+ D + +IGN I + YN+NL+ F N
Sbjct: 534 QMSNNVPFQGWDDNNHDSNYDANVIGNSIDTLIDPEGHTSINSNYNRNLDFNFCN----- 588
Query: 588 SGNCTMGPFSQSMDQSNSPYIAQLTGVEKAPLNTKLRSNDDFLLEQSKSHDGFIQNNYDP 647
P + G+ L+ +++ + KS + NN
Sbjct: 589 ------------------PLQMKHDGIMGLSEENSLKQQYGYIMNRQKSQNSSATNNLGS 630
Query: 648 MDDMMSGILKRDSNETILMDG 668
++D S ++K+ ++ +DG
Sbjct: 631 LEDFASSMMKQKQDKVKFLDG 651
>gi|356562101|ref|XP_003549312.1| PREDICTED: two-component response regulator ARR12-like [Glycine
max]
Length = 667
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 303/668 (45%), Positives = 409/668 (61%), Gaps = 45/668 (6%)
Query: 18 DKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDV 77
D+FPIGMRVLAVDDD TCL VLE LR CQY VT T A+TAL +LREN+ FDLVISDV
Sbjct: 14 DQFPIGMRVLAVDDDSTCLMVLETLLRRCQYHVTTTKNAITALNLLRENKTMFDLVISDV 73
Query: 78 HMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQ 137
HMPDMDGFKLLE VGLEMDLPVIMLS D K+VMKGITHGACDYLLKPVRIEEL+NIWQ
Sbjct: 74 HMPDMDGFKLLELVGLEMDLPVIMLSVNDDPKMVMKGITHGACDYLLKPVRIEELQNIWQ 133
Query: 138 HVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDG 197
HVIRRKK+ K+QNK + + + +G G+G+ +TGNSDQNGK ++KRKDQD D+DE+
Sbjct: 134 HVIRRKKIDSKEQNKTSDYDKTNSDSGN-GRGSAATGNSDQNGKPSKKRKDQDEDDDEEN 192
Query: 198 DDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVA 257
D D +NED +TQKKPRVVW+ ELHRKFV AVN LG+DKAVPKKILDLMN E LTRENVA
Sbjct: 193 DTDH-DNEDPSTQKKPRVVWSVELHRKFVSAVNLLGIDKAVPKKILDLMNDEKLTRENVA 251
Query: 258 SHLQKFRLYLKRLS-NETPQAGMVAALGSKDSSYLRIGALDGFGDLRSLNSPGRLSSSAI 316
SHLQK+RLYLKR+S QA MVAALG+ DSSYLR+G+L G G L++L P + ++A
Sbjct: 252 SHLQKYRLYLKRISCGANRQANMVAALGTADSSYLRMGSLSGVGHLQTLTGPQQFHNNAF 311
Query: 317 SSSYVPGNMFGRFNSTSGLSMHGIASSGMIQPGHSQSFNTSFNTIGKIQQAMFPANRISN 376
+ PG M GR N++ GL+ HG++SS +Q H+Q+ N S N K Q ++ N+ N
Sbjct: 312 -RPFPPGGMIGRLNTSVGLNNHGLSSSEALQLSHAQNLNNSINDPLKFQSSIACGNQ--N 368
Query: 377 LFQGVRTSSELNQLPQSKS-TTQIGDFNH----INSPTTSMAATGFTD--ATVAVGSSSS 429
QG+ S L+QL +K + +G + I++ T + +D V +G S S
Sbjct: 369 AIQGMPMSIGLDQLQHNKGVSVSVGPIQNMSPLIDARPTFAVSNRLSDQIPKVTMGCSPS 428
Query: 430 SVSTSSSNIMMLQGNLHQAHSRDAYGNQSSLSVASLNQESFDVGVRNSSNFLDHSRCNES 489
V S+N ++L+ + R Y N + SVAS + + S L H RC++
Sbjct: 429 PVLDVSNNALVLKADSENTQGRGVYENLT--SVASQHSQF-------SLPLLGHGRCSDI 479
Query: 490 WQDAVQLS-SNSLPLSEPFIHDQMPPNLRNTLSSTSCLDISSSMATSTHLEDSRGDLSCQ 548
W ++ S +NS P SE TL + SS + S DS+ D+ Q
Sbjct: 480 WSSPMRSSGTNSYPPSE-------------TLQGGNLSGASSITSLSNQSHDSQTDMHSQ 526
Query: 549 PGLI----GNVIQNYTSKQQWLEHKQGYNQNLNNPFSNVNTLL--SGNCTM-GPFSQSMD 601
GLI I N W +H + + N +++++L+ G+ ++ +++++D
Sbjct: 527 -GLIFTNNSGQISNNVPFLGWDDHNHDSSYHSNVIGNSIDSLIDPEGHTSINSTYNRNLD 585
Query: 602 -QSNSPYIAQLTGVEKAPLNTKLRSNDDFLLEQSKSHDGFIQNNYDPMDDMMSGILKRDS 660
P + G+ L+ +++ Q KS + NN ++D +S ++K+
Sbjct: 586 FNFCDPLQMKHDGIMGLSDENSLKQQHRYIMNQQKSQNSRAPNNIGSLEDFVSSMMKQKQ 645
Query: 661 NETILMDG 668
++ +DG
Sbjct: 646 DKVKFLDG 653
>gi|298103726|emb|CBM42564.1| putative B-type response regulator 22 [Populus x canadensis]
Length = 668
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 319/690 (46%), Positives = 413/690 (59%), Gaps = 66/690 (9%)
Query: 1 MTAEERMGSAGCEDGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTAL 60
MT E+ +G D +ID+FPIGMRVLAVDDDPTCL +LE LR CQY VT T+QA+TAL
Sbjct: 1 MTVEQGIG-----DSNIDQFPIGMRVLAVDDDPTCLLLLETLLRRCQYNVTTTSQAITAL 55
Query: 61 KMLRENRNNFDLVISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGAC 120
+MLREN+N FDLVISDVHMPDMDGFKLLE VGLEMDLPVIMLSA GD KLVMKGITHGAC
Sbjct: 56 RMLRENKNKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSANGDPKLVMKGITHGAC 115
Query: 121 DYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNG 180
YLLKPVRIEELK IWQHVIRRKK KD+N N++ G+ E DQ
Sbjct: 116 YYLLKPVRIEELKTIWQHVIRRKKSDNKDRNSSDNRDKPNQGSSEAV--------PDQ-- 165
Query: 181 KSNRKRKDQDGDEDEDGDDDGHENEDS----TTQKKPRVVWTPELHRKFVGAVNQLGVDK 236
K N+KRKDQ+GD+DED D+D E+E TTQKKPRVVW+ ELHRKFV AVNQLGVDK
Sbjct: 166 KLNKKRKDQNGDDDEDHDEDEDEDEHENEDPTTQKKPRVVWSMELHRKFVAAVNQLGVDK 225
Query: 237 AVPKKILDLMNVEGLTRENVASHLQKFRLYLKRLSN-ETPQAGMVAALGSKDSSYLRIGA 295
AVPKKILDLMNVE LTRENVASHLQK+R YLKR+S QA MVAALGS D+SYL++ +
Sbjct: 226 AVPKKILDLMNVEKLTRENVASHLQKYRHYLKRISTVANQQANMVAALGSSDASYLQMNS 285
Query: 296 LDGFGDLRSLNSPGRLSSSAISSSYVPGNMFGRFNSTSGLSMHGIASSGMIQPGHSQSFN 355
+ G G L SL + S+ S G M R NS + L +HG+ S G+IQ GH Q+
Sbjct: 286 MSGLG-LHSLAGSVQFHSTPFRSLPSSG-MLDRLNSPAVLGIHGLPSPGVIQLGHVQTAP 343
Query: 356 TSFNTIGKIQQAMFPANRISNLFQGVRTSSELNQLPQSKSTTQIGDF-NHINSPTTSMAA 414
N + Q P N N+ QG+ EL+Q+ +K I + H++ + +
Sbjct: 344 HMANGLSHFQPVGHPGNN-GNILQGMPMPLELDQIQSNKGVNYIPELPTHLDDTASFPVS 402
Query: 415 TGFTDATVAVGSSSSSVSTSSSNIMMLQGNLHQAHSRDAYGNQSSLSVASLNQESFDVGV 474
+G T+ + GSS+S S+ +ML+G+ G QSSLS SLN
Sbjct: 403 SGSTNMKIIAGSSNSPFVGVSNKHLMLEGHDQGLQDGQKSGKQSSLSAGSLNPGY----- 457
Query: 475 RNSSNFLDHSRCNESWQDAVQ---LSSNSLPLSEPFIHDQMPPN-LRNTLSSTSC----- 525
SS+F DH R N++W +AVQ S+S L++ F + P+ +R+ +S+ +
Sbjct: 458 --SSHFPDHGRRNDNWSNAVQSNGAQSDSFTLNDYFKQSTLHPSAIRDRMSTMALQSRNN 515
Query: 526 -LDISSSMATSTHLEDSRGDLSCQPGL-----IGNVIQNYTSKQQWLEHKQGYNQNLNNP 579
D+SS HL+DS+ DL C+ G+ G +I N W +H+Q + N
Sbjct: 516 PCDVSSVSTLPIHLQDSKADLPCRVGVATVSNAGQLINN--GSLGWDDHRQDDPYHSNGL 573
Query: 580 FSNVNTLLSGNCTMGPFSQSMDQSNSPY------------------IAQLTGVEKAPLNT 621
+++N+ N P ++D +N + + + VE + + T
Sbjct: 574 SNSINSAFPINGNGSPNGFNLDPNNLFFQRTTSFISTGPSNFVDTSLMKHNEVECSAMET 633
Query: 622 KLRSNDDFLLEQSKSHDGFIQNNYDPMDDM 651
+RS D +LL Q K D F+ NN+ ++D+
Sbjct: 634 LVRSKDGYLLGQEKPQDSFVLNNFGSLEDL 663
>gi|356515054|ref|XP_003526216.1| PREDICTED: two-component response regulator ARR12-like [Glycine
max]
Length = 696
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 301/706 (42%), Positives = 412/706 (58%), Gaps = 51/706 (7%)
Query: 1 MTAEERMGSAGCEDGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTAL 60
MT E++M +G D+FP+GMRVLAVDDDPTCL VLE LR CQY T TNQA+ AL
Sbjct: 1 MTVEKKMNDSG------DEFPVGMRVLAVDDDPTCLLVLETLLRRCQYHATTTNQAIKAL 54
Query: 61 KMLRENRNNFDLVISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGAC 120
+LRE+++ FDLVISDVHMPDMDGFKLLE VGLEMDLPVIMLSA GDTKLVMKGI+HGAC
Sbjct: 55 ALLREHKDKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSANGDTKLVMKGISHGAC 114
Query: 121 DYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNG 180
DYLLKPVR+EELKNIWQHVIRRKK K++NK N + G G+ TGNSD N
Sbjct: 115 DYLLKPVRMEELKNIWQHVIRRKKFDSKEKNKTRNIDKP-TSNSSNGLGSSGTGNSDHNE 173
Query: 181 KSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPK 240
K +KRKDQD +++++ ++ H+N+D + QKKPRVVW+ ELHRKFV AVNQLG+DKAVPK
Sbjct: 174 KLTKKRKDQD-EDEDEEQENDHDNDDPSAQKKPRVVWSVELHRKFVAAVNQLGIDKAVPK 232
Query: 241 KILDLMNVEGLTRENVASHLQKFRLYLKRLSN-ETPQAGMVAALGSKDSSYLRIGALDGF 299
KILDLMNVE LTRENVASHLQK+RLYLKR+S Q MV ALG D SYLR+ ++ G
Sbjct: 233 KILDLMNVEKLTRENVASHLQKYRLYLKRISCVANQQTNMVVALGGADPSYLRMNSVSGV 292
Query: 300 GDLRSLNSPGRLSSSAISSSYVPGNMFGRFNSTSGLSMHGIASSGMIQPGHSQSFNTSFN 359
G ++S++ G+L ++A S+ P + R N+ +GL++HG SG++Q SQ+ + +
Sbjct: 293 GHIQSISGSGQLHNNAF-RSFPPSGIINRLNTPAGLNVHGFP-SGVLQLSQSQNLKNTND 350
Query: 360 TIGKIQQAMFPANRISNLFQGVRTSSELNQLPQSKSTTQIGDFNHI-NSPTTSMAATGFT 418
+ K Q A+ PAN+ N G+ S L+QL +K + + + ++ TT +
Sbjct: 351 NL-KFQSAIVPANQ--NGVHGMTVSVGLDQLQNNKGVMSVQNLTTVFDAKTTFPISNKLP 407
Query: 419 DATVAVGSSSSSVS--TSSSNIMMLQGNLHQAHSRDAYGNQSSLSVASLNQESFDVGVRN 476
D + +S S + S+N +ML+ G Q S+ + +L+
Sbjct: 408 DPRPKITNSGSHTPDVSFSNNALMLEPR--------PQGTQGSVRIETLSSSVASQHSEF 459
Query: 477 SSNFLDHSRCNESWQDAVQ---LSSNSLPLSEPFIHDQMPP--NLRNTLSSTSCLDISSS 531
S + LD R +++W VQ + +NS P SE F +PP N+ + L +S
Sbjct: 460 SLSLLDQGRYSDNWASTVQPSVIQTNSYPPSECFGQTNIPPTDNMASVPLQGGNLSGASI 519
Query: 532 MATSTHLEDSRGDLSCQPGLIGNV---IQNYTSKQQWLEHKQGYNQNLNNPFSNVNTLLS 588
+ S DS D+ + N I + Q W ++ Q + N ++N+L
Sbjct: 520 TSLSRQSYDSMTDMHSEGVTFTNRPGHISSNVPYQGWHDNNQDATHHSN--ILSINSLTP 577
Query: 589 GNCTMGPFSQSMDQSNSPYIAQLTGVEKAPLNTK----LRSNDDFLLEQ--------SKS 636
N P + NS L PL K + D+ L +Q KS
Sbjct: 578 VNGAAVPAGHA--AMNSALHRNLDFNYCDPLQMKHEGFVELTDEALSKQHQGNIMNLPKS 635
Query: 637 HDGFIQNNYDPMDDMMSGILKRDSNETILMDGELGFDAYS--LSSC 680
NN ++D++S ++K+++++ L+DG L + YS LS C
Sbjct: 636 QQSHFSNNLGSLEDLVSSMMKQENDKMKLLDGNLICNNYSGGLSRC 681
>gi|356507378|ref|XP_003522444.1| PREDICTED: two-component response regulator ARR12-like [Glycine
max]
Length = 656
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 297/680 (43%), Positives = 403/680 (59%), Gaps = 47/680 (6%)
Query: 1 MTAEERMGSAGCEDGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTAL 60
MT E++ +G D+FP+GMRVLAVDDDPTCL VL+ L+ CQY VT TNQA+ AL
Sbjct: 1 MTVEKKRNDSG------DEFPVGMRVLAVDDDPTCLLVLKTLLQRCQYHVTTTNQAIKAL 54
Query: 61 KMLRENRNNFDLVISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGAC 120
+LRE+++ FDLVISDVHMPDMDGFKLLE VGLEMDLPVIMLSA GDTK+VMKGI+HGAC
Sbjct: 55 ALLREHKDKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSANGDTKMVMKGISHGAC 114
Query: 121 DYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNG 180
DYLLKPVR+EELKNIWQHVIRRKK K++NK N + +G G G+ TGNSDQN
Sbjct: 115 DYLLKPVRMEELKNIWQHVIRRKKFDSKEKNKTSNLDKPTSNSG-NGLGSSGTGNSDQNE 173
Query: 181 KSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPK 240
K +KRKDQD DEDED ++D +NED + QKKPRVVW+ +LHRKFV AVNQLG+DKAVPK
Sbjct: 174 KLTKKRKDQDEDEDEDQENDL-DNEDPSAQKKPRVVWSVDLHRKFVAAVNQLGIDKAVPK 232
Query: 241 KILDLMNVEGLTRENVASHLQKFRLYLKRLSN-ETPQAGMVAALGSKDSSYLRIGALDGF 299
KILDLMNVE LTRENVASHLQK+RLYLKR+S QA MVAALG D SYLR+ ++ G
Sbjct: 233 KILDLMNVEKLTRENVASHLQKYRLYLKRISCVANQQANMVAALGVADPSYLRMSSVSGV 292
Query: 300 GDLRSLNSPGRLSSSAISSSYVPGNMFGRFNSTSGLSMHGIASSGMIQPGHSQSFNTSFN 359
G +++L+ G+L ++ S+ P + R N+ +GL++HG SG++Q SQ+ N + N
Sbjct: 293 GHVQTLSGSGQLHNNNF-RSFPPSGIINRLNTPAGLNVHGFP-SGVLQLSQSQNLNNA-N 349
Query: 360 TIGKIQQAMFPANRISNLFQGVRTSSELNQLPQSKSTTQIGDFNHI-NSPTTSMAATGFT 418
K Q + P N+ N QG+ S L+QL +K + + + ++ TT
Sbjct: 350 DHHKFQSVIVPVNQ--NGVQGMTVSVGLDQLQNNKVVMSVQNLTTVFDAKTTFPIPNKLP 407
Query: 419 DATVAVGSSSSSVSTS--SSNIMMLQGNLHQAHSRDAYGNQSSLSVASLNQESFDVGVRN 476
D + +S S S S+N +ML+ G+Q S+ + +L+
Sbjct: 408 DPRPKITNSVSHTSDVHFSNNALMLEPR--------PQGSQGSVRIGTLSSSVASQHSEF 459
Query: 477 SSNFLDHSRCNESWQDAVQ---LSSNSLPLSEPFIHDQMPP--NLRNTLSSTSCLDISSS 531
S + LD R +++W AVQ + +N P SE F +PP N+ + L S
Sbjct: 460 SLSLLDQGRYSDNWTSAVQPSVIQTNFFPPSECFRQTNIPPADNMASVPLQGGNLSGPSI 519
Query: 532 MATSTHLEDSRGDLSCQPGLIGNVIQNYTSK----QQWLEHKQGYNQNLNNPFSNVNTLL 587
+ S DS ++ + G+ +TS Q W +H Q + N ++N+L
Sbjct: 520 TSLSRQSHDSMTEMHSE-GMTFTNRPGHTSSNVPFQGWDDHNQDATHHSN--IMSINSLT 576
Query: 588 SGN---------CTMGPFSQSMD-QSNSPYIAQLTGVEKAPLNTKLRSNDDFLLEQSKSH 637
N T +++D P + G + T L+ + ++Q KS
Sbjct: 577 PVNGAAVQAGHAATNSVLHRNLDFNYCDPLQMKHEGFVELTDETLLKQHQGNTMDQQKSQ 636
Query: 638 DGFIQNNYDPMDDMMSGILK 657
+ NN ++D++S ++K
Sbjct: 637 ENHFSNNLGSLEDLVSSMMK 656
>gi|357466055|ref|XP_003603312.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|355492360|gb|AES73563.1| Two-component response regulator ARR1 [Medicago truncatula]
Length = 645
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 262/503 (52%), Positives = 328/503 (65%), Gaps = 30/503 (5%)
Query: 18 DKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDV 77
D+FPIGMRVLAVDDDPTCL VLE LR CQY VT T+QA+TAL MLREN++ FDLVISDV
Sbjct: 6 DRFPIGMRVLAVDDDPTCLLVLETLLRRCQYHVTTTSQAITALTMLRENKDKFDLVISDV 65
Query: 78 HMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQ 137
HMPDMDGFKLLE VGLEMDLPVIMLSAYGDTKLVMKGI+HGACDYLLKPVR+EELKNIWQ
Sbjct: 66 HMPDMDGFKLLELVGLEMDLPVIMLSAYGDTKLVMKGISHGACDYLLKPVRLEELKNIWQ 125
Query: 138 HVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDG 197
HVIR+KK PK++NK + + +G G + A NSD+NGK +KRKDQD +++++
Sbjct: 126 HVIRKKKSDPKEKNKTSKPDKTTSDSGSGLRSA-GAENSDENGKLTKKRKDQD-EDEDED 183
Query: 198 DDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVA 257
++G++NED + QKKPRVVW+ ELHRKFV AVNQLG+DKAVPKKILD+MNVE +TRENVA
Sbjct: 184 KENGNDNEDPSAQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDMMNVENITRENVA 243
Query: 258 SHLQKFRLYLKRLSN-ETPQAGMVAALGSKDSSYLRIGALDGFGDLRSLNSPGRLSSSAI 316
SHLQK+RLYLKR+S QA MVAALGS D SYLR+G G ++A
Sbjct: 244 SHLQKYRLYLKRISCVANQQASMVAALGSADQSYLRMGG------------SGHFHNNAF 291
Query: 317 SSSYVPGNMFGRFNSTSGLSMHGIASSGMIQPGHSQSFNTSFNTIGKIQQAMFPANRISN 376
S+ P + G N+ + L+ HG + SG++Q G S++ N S N K Q A+ P N+ N
Sbjct: 292 -RSFSPSGIIGNLNTPTSLNGHGFSPSGLLQLGQSRNLNNSCNDQLKFQSAITPVNQ--N 348
Query: 377 LFQGVRTSSELNQLPQSKSTTQIGDFNHINSPTTSMAATGFTDATVAVGSSSSSVST--S 434
+ QG+ S + L SK + + N + TT F D + +SSS +
Sbjct: 349 ILQGMPMSIGFDHLQNSKGVISVQNLN-TDVKTTFPIPNKFPDQRPSFATSSSHPPSLGI 407
Query: 435 SSNIMMLQGNLHQAHSRDAYGNQSSLSVASLNQESFDVGVRNSSNFLDHSRCNESWQDAV 494
S+N +ML + + H G SS S + F S + LD R +W V
Sbjct: 408 SNNGLMLDTHPERKHGGIGIGYGSSSSSVASQHSEF------SFSMLDQGRHGGNWSSDV 461
Query: 495 QLS---SNSLPLSEPFIHDQMPP 514
+S +NS SE F +PP
Sbjct: 462 PISGIQTNSFSSSECFRQTAVPP 484
>gi|224141943|ref|XP_002324320.1| type-b response regulator [Populus trichocarpa]
gi|222865754|gb|EEF02885.1| type-b response regulator [Populus trichocarpa]
Length = 661
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 311/689 (45%), Positives = 405/689 (58%), Gaps = 71/689 (10%)
Query: 1 MTAEERMGSAGCEDGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTAL 60
MT E+ +G D +ID+FPIGMRVLAVDDDPTCL +LE LR CQY VT T+QA+TAL
Sbjct: 1 MTVEQGIG-----DSNIDQFPIGMRVLAVDDDPTCLLLLETLLRRCQYNVTTTSQAITAL 55
Query: 61 KMLRENRNNFDLVISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGAC 120
+MLREN+N FDLVISDVHMPDMDGFKLLE VGLEMDLPVIMLSA GD KLVMKGITHGAC
Sbjct: 56 RMLRENKNKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSANGDPKLVMKGITHGAC 115
Query: 121 DYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNG 180
YLLKPVRIEELK IWQHVIRRKK KD+N N++ G+ E DQ
Sbjct: 116 YYLLKPVRIEELKTIWQHVIRRKKSDNKDRNSSDNRDKPNQGSSEAV--------PDQ-- 165
Query: 181 KSNRKRKDQDGDEDEDGDDDGHENEDS--TTQKKPRVVWTPELHRKFVGAVNQLGVDKAV 238
K N+KRKDQ+GDEDED D+D E+E+ TTQKKPRVVW+ ELHRKFV AVNQLGVDKAV
Sbjct: 166 KLNKKRKDQNGDEDEDHDEDEDEHENEDPTTQKKPRVVWSVELHRKFVAAVNQLGVDKAV 225
Query: 239 PKKILDLMNVEGLTRENVASHLQKFRLYLKRLSN-ETPQAGMVAALGSKDSSYLRIGALD 297
PKKILDLMNVE LTREN K+R YLKR+S QA MVAALGS D+SYL++ ++
Sbjct: 226 PKKILDLMNVEKLTREN------KYRHYLKRISTVANQQANMVAALGSSDASYLQMNSMS 279
Query: 298 GFGDLRSLNSPGRLSSSAISSSYVPGNMFGRFNSTSGLSMHGIASSGMIQPGHSQSFNTS 357
G L SL + S+ S G M R NS + L +HG+ S G+IQ GH Q+ +
Sbjct: 280 VLG-LHSLAGSVQFHSTPFRSLQSSG-MLDRLNSPAVLGIHGLPSPGVIQLGHVQTAPHT 337
Query: 358 FNTIGKIQQAMFPANRISNLFQGVRTSSELNQLPQSKSTTQIGDF-NHINSPTTSMAATG 416
N + Q N N+ QG+ EL+Q+ +K I + H++ + ++G
Sbjct: 338 ANGLSHFQPVGHRGNN-GNILQGMPMPLELDQIQSNKGVNYIPELPTHLDDTASFPVSSG 396
Query: 417 FTDATVAVGSSSSSVSTSSSNIMMLQGNLHQAHSRDAYGNQSSLSVASLNQESFDVGVRN 476
TD + GSS+S S+ +ML+G+ G QSSLS SLN
Sbjct: 397 STDMKIIAGSSNSPFVGVSNKHLMLEGHGQGLQDGQKSGKQSSLSAGSLNPGY------- 449
Query: 477 SSNFLDHSRCNESWQDAVQ---LSSNSLPLSEPFIHDQMPPN-LRNTLSSTSC------L 526
SS+F DH RCN++W +AV S+S L++ F + P+ +R+ +S+ +
Sbjct: 450 SSHFPDHGRCNDNWSNAVPSNGAQSDSFTLNDYFKQSTLHPSAIRDRMSTMALQSRNNPC 509
Query: 527 DISSSMATSTHLEDSRGDLSCQPGL------IGNVIQNYTSKQQWLEHKQGYNQNLNNPF 580
D+SS HL+DS+ DL C+ G+ G +I N W + +Q + N
Sbjct: 510 DVSSVSTLPMHLQDSKADLPCRVGVATVSSNAGQLINN--GSLGWDDRRQDDPYHSNGLS 567
Query: 581 SNVNTLLSGNCTMGPFSQSMDQSNSPY------------------IAQLTGVEKAPLNTK 622
+++N+ N P ++D +N + + + VE + + T
Sbjct: 568 NSINSAFPINGNGSPNGFNLDPNNLFFQRTTSFISTGPSNFVDTSLMKHNEVECSAMETL 627
Query: 623 LRSNDDFLLEQSKSHDGFIQNNYDPMDDM 651
+RS D +LL Q K D + NN+ ++D+
Sbjct: 628 VRSKDGYLLGQEKPQDSSVSNNFGSLEDL 656
>gi|109631194|gb|ABG35773.1| SRR391 [Striga asiatica]
Length = 541
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 236/453 (52%), Positives = 298/453 (65%), Gaps = 41/453 (9%)
Query: 1 MTAEERMG-SAGCEDGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTA 59
MT E+ G + CE+ FP+GMRVLAVDDDP CLK+L+ LR CQY V+ T+QA A
Sbjct: 1 MTVEKIKGDNENCEN-----FPVGMRVLAVDDDPICLKLLDTLLRKCQYHVSTTSQARMA 55
Query: 60 LKMLRENRNNFDLVISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGA 119
LKMLREN++ FDLVISDVHMPDMDGFKLL+ VGLEMDLPVIMLSA D KLVMKG+THGA
Sbjct: 56 LKMLRENKDRFDLVISDVHMPDMDGFKLLDQVGLEMDLPVIMLSANSDPKLVMKGVTHGA 115
Query: 120 CDYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQ-ENSRVGAGEGGQ--GAMSTGNS 176
CDYL+KPVRIEEL+NIWQHVIRR+K +++NK +Q + +++ +GEGGQ G + N+
Sbjct: 116 CDYLVKPVRIEELRNIWQHVIRRRKSVTRNENKSADQAKPNQIASGEGGQLGGTIPGENA 175
Query: 177 DQNGKSN-RKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVD 235
DQNGK+N RKRKD+ ED +DG+ENED TQKKPRVVW+ ELHRKFV AVNQLG++
Sbjct: 176 DQNGKTNIRKRKDE-----EDESEDGNENEDPATQKKPRVVWSIELHRKFVAAVNQLGIE 230
Query: 236 KAVPKKILDLMNVEGLTRENVASHLQKFRLYLKRLSN-ETPQAGMVAALGSKDSSYLRIG 294
KAVPK+ILDLMNVEGLTRENVASHLQK+RLYLKR+S T QA M AA G KDS ++R+G
Sbjct: 231 KAVPKRILDLMNVEGLTRENVASHLQKYRLYLKRISTVATQQANMAAAFGVKDSPFMRMG 290
Query: 295 ALDGFGDLRSLNSPGRLSSSAISSSYVPGNMFGRFNSTSGLSMHGIASSGMIQPGHSQSF 354
G +A Y PG M GR N +++ I+ S IQP
Sbjct: 291 PFGGL-------------PNAAFPHYSPGAMLGRINPPPNMNLRNISPSAFIQP------ 331
Query: 355 NTSFNTIGKIQQAMFPANRISNLFQGVRTSSELNQLPQSKSTTQIGDFNHINSPTTSMAA 414
SF+ + K+ + N NLF G++ S EL+ P + + + I P+ +
Sbjct: 332 -NSFSALNKMHPGLANPNPGQNLFPGIQLSLELD--PNKQVPNKFPEQGTIGGPSNVING 388
Query: 415 T---GFTDATVAVGSSSSSVSTSSSNIMMLQGN 444
+ +G S SV + ++ +M N
Sbjct: 389 NFQQTMNNGGFGIGPDSFSVGSIETSGLMQPNN 421
Score = 39.7 bits (91), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 632 EQSKSHDGFIQNNYDPMDDMMSGILKRDSNETILMDGELGFDAYSLSS 679
+ KS GF YD +DDMM+ ++KR+ +ET + + FD+YS S
Sbjct: 492 QNEKSQGGFGGRGYDALDDMMNAMIKREQDETA-PNCDFAFDSYSFGS 538
>gi|224089346|ref|XP_002308698.1| type-b response regulator [Populus trichocarpa]
gi|222854674|gb|EEE92221.1| type-b response regulator [Populus trichocarpa]
Length = 588
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 306/696 (43%), Positives = 398/696 (57%), Gaps = 123/696 (17%)
Query: 1 MTAEERMGSAGCEDGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTAL 60
MT E+ +G D +ID+FPIGMRVLAVDDDPTCL +LE LR CQY VT T+QA+TAL
Sbjct: 1 MTVEQGIG-----DSNIDQFPIGMRVLAVDDDPTCLLLLETLLRRCQYTVTTTSQAITAL 55
Query: 61 KMLRENRNNFDLVISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGAC 120
MLREN+N FDLVISDVHMPDMDGFKLLE VGLEMDLPVIMLSA GD KLVMKGITHGAC
Sbjct: 56 SMLRENKNKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSANGDPKLVMKGITHGAC 115
Query: 121 DYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNG 180
DYLLKPVRIEELKNIWQHVIRR+K KD+N N++ G+ E DQ
Sbjct: 116 DYLLKPVRIEELKNIWQHVIRRRKYDNKDRNSSDNRDKPNQGSSE--------AIPDQ-- 165
Query: 181 KSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPK 240
K N+KRKDQ+ DEDED D++ HENED TQKKPRV LHRKFV AVNQLG+DKAVPK
Sbjct: 166 KLNKKRKDQNEDEDEDRDENEHENEDPATQKKPRV-----LHRKFVAAVNQLGIDKAVPK 220
Query: 241 KILDLMNVEGLTRENVASHLQKFRLYLKRLSN-ETPQAGMVAALGSKDSSYLRIGALDGF 299
KILDLMNVE LTREN K+RLYLKR+S QA MVAALGS D+SYL++ +++G
Sbjct: 221 KILDLMNVEKLTREN------KYRLYLKRISTVANQQANMVAALGSSDASYLQMNSMNGM 274
Query: 300 GDLRSLNSPGRLSSSAISSSYVPGNMFGRFNSTSGLSMHGIASSGMIQPGHSQSFNTSFN 359
G L +L G+ ++ S G M R NS + L + G+ S G+I+ GH QS S N
Sbjct: 275 G-LHNLAGSGQFHNTPFRSLPSSG-MLSRLNSPAVLGIRGLPSPGVIRLGHVQSAPHSAN 332
Query: 360 TIGKIQQAMFPANRISNLFQGVRTSSELNQLPQSKSTTQIGDFNHINSPTTSMAATGFTD 419
+ Q P N N+ QG+ S EL+Q+ +K D
Sbjct: 333 GLSHFQPVGHPGNN-GNILQGMPMSLELDQIQSNK------------------------D 367
Query: 420 ATVAVGSSSSSVSTSSSNIMMLQGNLHQAHSRDAYGNQSSLSVASLNQESFDVGVRNSSN 479
+ GSS+S S +ML+G+ + +H
Sbjct: 368 MKIIAGSSNSPFVGVSGKPLMLEGHGYSSH------------------------------ 397
Query: 480 FLDHSRCNESWQDAVQLSSNSLPLSEPFIHDQMPPNLRNTLSSTSCLDISSSMATST--- 536
F DH RCN++W +AVQ N ++TL +S D S+MA +
Sbjct: 398 FPDHGRCNDNWSNAVQ------------------SNGQSTLHPSSIRDSMSTMALQSRNN 439
Query: 537 HLEDSRGDLSCQPGLI----GNVIQNYTSKQQWLEHKQGYNQNLNNPFSNVNTLLSGNCT 592
H +DS+ DL CQ + G +I N + W +H+Q + N +++N+ + N
Sbjct: 440 HCDDSKADLQCQVATMSSDAGQIINN--GQLGWDDHRQDDPYHANGISNSINSAIPINGN 497
Query: 593 MGPFSQSMDQSNSPYIAQLT------GVEKAPLNTKLRSNDD-FLLEQSKSHDGFIQNNY 645
QS+D +N I Q T G + ++ N+D +LL Q K D ++ NN+
Sbjct: 498 GSLVGQSLDPNN--MIFQRTRSFSSAGQSNFVDTSLMKHNEDGYLLGQQKQQDSYVSNNF 555
Query: 646 DPMDDMMSGILKRDSNETILMDGELGFDAYSLSSCM 681
++D++S ++++D + L +G+ G YSL +C+
Sbjct: 556 GSLEDLVS-VMEQD--KVKLPEGDFGCGGYSLRTCI 588
>gi|357480193|ref|XP_003610382.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|355511437|gb|AES92579.1| Two-component response regulator ARR1 [Medicago truncatula]
Length = 633
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 278/663 (41%), Positives = 381/663 (57%), Gaps = 66/663 (9%)
Query: 1 MTAEERM-GSAGCEDGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTA 59
M E+R+ G E+G FP+GMRVLAVDDD T LKVLE L C+Y VT T ++V A
Sbjct: 1 MAVEDRLVGEDVTEEG----FPVGMRVLAVDDDQTSLKVLEKHLLTCKYNVTTTTKSVEA 56
Query: 60 LKMLRENRNNFDLVISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGA 119
L++LRE R+ FDL+ISDV+MP+MDGFKLLE VGLEMDLP IMLS + D + VMKG+ GA
Sbjct: 57 LELLREKRSMFDLIISDVNMPEMDGFKLLEQVGLEMDLPFIMLSGHDDRERVMKGVMKGA 116
Query: 120 CDYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQN 179
CDYL+KP+R+EELKNIWQHV+ RKK+ KDQN+ + + G GQ S +N
Sbjct: 117 CDYLVKPIRLEELKNIWQHVV-RKKIESKDQNQGI------ISDGVSGQDTSSENIPKKN 169
Query: 180 GKSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVP 239
RKRK+Q +E+ D D++ E +T+KKPR VW ELH+KFV VN LG+DKA P
Sbjct: 170 KTHGRKRKEQSEEEEADTDEENDEEH--STRKKPRFVWDNELHKKFVSIVNLLGLDKAYP 227
Query: 240 KKILDLMNVEGLTRENVASHLQKFRLYLKRLSNETPQAGMVAALGSKDSSYLRIGALDGF 299
KKI DLMNVEGLTRENVASHLQK+RL LKR S QA + AAL G++ G+
Sbjct: 228 KKIRDLMNVEGLTRENVASHLQKYRLSLKRPSK---QAKVDAALDPLQQK----GSVRGY 280
Query: 300 GDLRSLNSPGRLSSSAISSSYVPGNMFGRFNSTSGLSMHGIASSGMIQPGHSQSFNTSFN 359
GD +L R+ SS + +Y MF R N+ S L+ ++ S + P SQ+
Sbjct: 281 GDFCTLPGSRRILSSTL-PTYASSGMFCRLNAPSSLNFRRMSPSAPVPPLQSQN------ 333
Query: 360 TIGKIQQAMFPANRISNLFQGVRTSSELNQLPQSKSTTQIGDFNHINSPTTSMAATGFTD 419
I +Q MF A+ + QGVRTS+E+NQ ++ + N I+ + ++GF D
Sbjct: 334 -ILSFKQPMFSASESLSFSQGVRTSAEINQFQRNIYPLGNKNLNPIDYTSAFTVSSGFQD 392
Query: 420 ATVAVGSSSSSVSTSSSNIMMLQGNLHQAHSRDAYGNQSSLSVASLNQESFDVGVRNSSN 479
V +++SS+S SSN NL H+ A+ N SS+ A + +SF+ SSN
Sbjct: 393 IRDTVNNANSSLSCISSN------NL-STHNSGAFVNHSSVGGAYVEPKSFNPATYGSSN 445
Query: 480 FLDHSRCNESWQDAVQLSSNSLPLSEPFIHDQMPPNLRNTLSSTSCLDISSSMATSTHLE 539
F +SN PLSE F +DQ+ N N S +S S +ST
Sbjct: 446 F----------------ASNPSPLSEDFNNDQISGNSLNFASPSSHFRKSPVDFSSTLAV 489
Query: 540 DSRGDLSCQPGLIGNVIQN--YTSKQQWLEHKQGYNQNLNNPFSN-VNTLLSGNCTMGPF 596
S + CQ GL+GNV++ YT++Q QN+++ F+N +++L S N
Sbjct: 490 PSEEAMQCQDGLLGNVVKASCYTTQQ----------QNVSSSFNNTLDSLASYNEDTSSM 539
Query: 597 SQSMDQSNSPYIAQLTGVEKAPLNTKL-RSNDDFLLEQSKSHDGFIQNNYDPMDDMMSGI 655
QS+ Q+NS + Q+ VEK + ++ D EQ + DG I+N+ +DD +S
Sbjct: 540 VQSVPQTNSQLMTQMPQVEKFYSDARVTEPRGDCFFEQLLALDGLIENSCVSLDDTISEA 599
Query: 656 LKR 658
+K+
Sbjct: 600 VKQ 602
>gi|125538347|gb|EAY84742.1| hypothetical protein OsI_06112 [Oryza sativa Indica Group]
Length = 626
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 230/482 (47%), Positives = 305/482 (63%), Gaps = 63/482 (13%)
Query: 18 DKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDV 77
D+FP+GMRVLAVDDDPTCLK+LEN L CQY VT T QA TALK+LREN++ FDLVISDV
Sbjct: 23 DQFPVGMRVLAVDDDPTCLKILENLLLRCQYHVTTTGQAATALKLLRENKDQFDLVISDV 82
Query: 78 HMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQ 137
HMPDMDGFKLLE VGLEMDLPVIMLSA G+T+ VMKGITHGACDYLLKPVR+E+L+ IWQ
Sbjct: 83 HMPDMDGFKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLRTIWQ 142
Query: 138 HVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNS---DQNGKSNRKRKDQDGDED 194
HVIRRK K++ N ++ AG+ QG + G S ++N + +RK +D++GD+
Sbjct: 143 HVIRRKNCDAKNRG---NDDD----AGQKAQGMNNEGESIGANRNKRQSRKSRDENGDDG 195
Query: 195 EDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRE 254
+D D++ +EN DS+TQKKPRVVW+ ELHRKFV AVNQLG++KAVPKKILDLMNVE +TRE
Sbjct: 196 DDSDENSNENGDSSTQKKPRVVWSVELHRKFVAAVNQLGIEKAVPKKILDLMNVENITRE 255
Query: 255 NVASHLQKFRLYLKRLSNE-TPQAGMVAALGSKDSSYLRIGALDGFGDLRSLNSPGRLSS 313
NVASHLQK+RLYLKRLS + + QA + AA G ++ +Y+ ++ FG+ N+ GR +
Sbjct: 256 NVASHLQKYRLYLKRLSTDASRQANLAAAFGGRNPAYIN---MNSFGN---YNAYGRYRT 309
Query: 314 SAISSSYVPGNMFGRFNSTSGLSMHGIASSGMIQPGHSQ-SFNTSFNTIGKIQQAMFPAN 372
+ N+ R NS S +HG+ S IQ GH+Q + +TS N +G +
Sbjct: 310 VPTAGHTQANNILTRMNSPSAFGVHGLLHSQPIQLGHAQNNLSTSLNDLGGLNNG----- 364
Query: 373 RISNLFQGVRTSSELNQLPQSKSTTQIGDFNHINSPTTSMAATGFTDATVAVGSSSSSVS 432
N+ +G + S+ L TG + + S+ + ++
Sbjct: 365 ---NMIRGAQMSTIL---------------------------TGPSGNSFPNISNGAPLA 394
Query: 433 TSSSNIMMLQGNLHQAHSRDAYGNQSSLSVASLNQESFDVGVRNSSNFLDHSRCNESWQD 492
T++ ++ L+ + Q SR V S + + F V S F D R +WQ
Sbjct: 395 TANRSLQPLESSSQQHLSR----------VHSSSADPFSTLVGESPQFPDLGRTTNTWQT 444
Query: 493 AV 494
AV
Sbjct: 445 AV 446
>gi|115444635|ref|NP_001046097.1| Os02g0182100 [Oryza sativa Japonica Group]
gi|49388028|dbj|BAD25144.1| putative response regulator 9 [Oryza sativa Japonica Group]
gi|113535628|dbj|BAF08011.1| Os02g0182100 [Oryza sativa Japonica Group]
gi|118790764|tpd|FAA00257.1| TPA: response regulator [Oryza sativa Japonica Group]
gi|215713506|dbj|BAG94643.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222622313|gb|EEE56445.1| hypothetical protein OsJ_05635 [Oryza sativa Japonica Group]
Length = 626
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 230/482 (47%), Positives = 305/482 (63%), Gaps = 63/482 (13%)
Query: 18 DKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDV 77
D+FP+GMRVLAVDDDPTCLK+LEN L CQY VT T QA TALK+LREN++ FDLVISDV
Sbjct: 23 DQFPVGMRVLAVDDDPTCLKILENLLLRCQYHVTTTGQAATALKLLRENKDQFDLVISDV 82
Query: 78 HMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQ 137
HMPDMDGFKLLE VGLEMDLPVIMLSA G+T+ VMKGITHGACDYLLKPVR+E+L+ IWQ
Sbjct: 83 HMPDMDGFKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLRTIWQ 142
Query: 138 HVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNS---DQNGKSNRKRKDQDGDED 194
HVIRRK K++ N ++ AG+ QG + G S ++N + +RK +D++GD+
Sbjct: 143 HVIRRKNCDAKNRG---NDDD----AGQKAQGMNNEGESIGANRNKRQSRKSRDENGDDG 195
Query: 195 EDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRE 254
+D D++ +EN DS+TQKKPRVVW+ ELHRKFV AVNQLG++KAVPKKILDLMNVE +TRE
Sbjct: 196 DDSDENSNENGDSSTQKKPRVVWSVELHRKFVAAVNQLGIEKAVPKKILDLMNVENITRE 255
Query: 255 NVASHLQKFRLYLKRLSNE-TPQAGMVAALGSKDSSYLRIGALDGFGDLRSLNSPGRLSS 313
NVASHLQK+RLYLKRLS + + QA + AA G ++ +Y+ ++ FG+ N+ GR +
Sbjct: 256 NVASHLQKYRLYLKRLSTDASRQANLAAAFGGRNPAYIN---MNSFGN---YNAYGRYRT 309
Query: 314 SAISSSYVPGNMFGRFNSTSGLSMHGIASSGMIQPGHSQ-SFNTSFNTIGKIQQAMFPAN 372
+ N+ R NS S +HG+ S IQ GH+Q + +TS N +G +
Sbjct: 310 VPTAGHTQANNILTRMNSPSAFGVHGLLHSQPIQLGHAQNNLSTSLNDLGGLNNG----- 364
Query: 373 RISNLFQGVRTSSELNQLPQSKSTTQIGDFNHINSPTTSMAATGFTDATVAVGSSSSSVS 432
N+ +G + S+ L TG + + S+ + ++
Sbjct: 365 ---NMIRGAQMSTIL---------------------------TGPSGNSFPNISNGAPLA 394
Query: 433 TSSSNIMMLQGNLHQAHSRDAYGNQSSLSVASLNQESFDVGVRNSSNFLDHSRCNESWQD 492
T++ ++ L+ + Q SR V S + + F V S F D R +WQ
Sbjct: 395 TANRSLQPLESSNQQHLSR----------VHSSSADPFSTLVGESPQFPDLGRTTNTWQT 444
Query: 493 AV 494
AV
Sbjct: 445 AV 446
>gi|326515596|dbj|BAK07044.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 580
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 224/413 (54%), Positives = 278/413 (67%), Gaps = 15/413 (3%)
Query: 1 MTAEERMGSAGCEDGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTAL 60
M +ER G+A D+FP+GMRVLAVDDDP CLKVLE LR CQY VT TNQA+ AL
Sbjct: 2 MRRDERRGAAAAATCR-DQFPVGMRVLAVDDDPVCLKVLETLLRRCQYHVTATNQAIIAL 60
Query: 61 KMLRENRNNFDLVISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGAC 120
+MLRENR+ FDLVISDVHMPDMDGFKLLE VGLEMDLPVIMLS G+TK VMKGITHGAC
Sbjct: 61 RMLRENRDMFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSVNGETKTVMKGITHGAC 120
Query: 121 DYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRVGAGEGG--QGAMSTGNSDQ 178
DYLLKPVRIEELKNIWQHV+RRK N + +E ++ + + + G+S Q
Sbjct: 121 DYLLKPVRIEELKNIWQHVVRRKFSTRDSLNADMYEECNKPPSSDSDYLYDQVKCGSSVQ 180
Query: 179 NGKSNRKRKD-QDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKA 237
+G+ N+KRK+ +EDEDGD G +N+D + K+PRVVW+ ELHRKFV AVN LG+DKA
Sbjct: 181 SGRPNKKRKEYHSEEEDEDGDSSGQDNDDPSAPKRPRVVWSVELHRKFVTAVNHLGIDKA 240
Query: 238 VPKKILDLMNVEGLTRENVASHLQKFRLYLKRLSN-ETPQAGMVAALGSKDSSYLRIGAL 296
VPK+IL+LMNVE LTRENVASHLQK+R+YL+RLS + QAG+VAALG +D +LR+ A
Sbjct: 241 VPKRILELMNVEKLTRENVASHLQKYRVYLRRLSAVASQQAGIVAALGGRD-PFLRMDAF 299
Query: 297 DGFGDLRSLNSPGRLSSSAISSSYVPGNMFGRFNSTSGLSMHGIASSGMIQPGHSQSFNT 356
+G ++ SP +A+S+ G + N+ + + + G+A+S I G S T
Sbjct: 300 EGLQGYQAFTSP-----AALSTFGAHGLLNSPRNNQTAVVIQGVATSRSIPTGSSSC--T 352
Query: 357 SFNTIGKIQQAMF--PANRISNLFQGVRTSSELNQLPQSKSTTQIGDFNHINS 407
+ IG P NR NL QG+ TS QL Q GD + I S
Sbjct: 353 TNPLIGDAANYHLSPPGNRHGNLAQGLVTSLGQTQLEQKWMNEGSGDLSSILS 405
>gi|357138369|ref|XP_003570765.1| PREDICTED: two-component response regulator ARR12-like
[Brachypodium distachyon]
Length = 615
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 216/394 (54%), Positives = 272/394 (69%), Gaps = 25/394 (6%)
Query: 1 MTAEERMGSAGCEDGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTAL 60
MT E R+ + +DG D+FP+GMRVLAVDDDPTCLKVLE+ L C Y VT T QA TAL
Sbjct: 1 MTVEGRV--SVVDDGR-DRFPVGMRVLAVDDDPTCLKVLESLLLRCDYHVTTTGQAATAL 57
Query: 61 KMLRENRNNFDLVISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGAC 120
+MLREN++ FDLVISDVHMPDMDGFKLLE VGLEMDLPVIMLSA G+T+ VMKGITHGAC
Sbjct: 58 RMLRENKDRFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSANGETQTVMKGITHGAC 117
Query: 121 DYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNG 180
DYLLKPVR+E+LK IWQHV+RR + N Q +V G+G +NG
Sbjct: 118 DYLLKPVRLEQLKTIWQHVVRRNTKTRGNDNDDAGQ---KVQNGDG-----------ENG 163
Query: 181 KSNRK----RKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDK 236
+NR R+D++GD+ +D D++ +EN D+++QKKPRVVW+ ELHRKFV AVNQLG+DK
Sbjct: 164 GANRNKRQSRRDENGDDGDDSDENSNENADASSQKKPRVVWSVELHRKFVAAVNQLGIDK 223
Query: 237 AVPKKILDLMNVEGLTRENVASHLQKFRLYLKRLS-NETPQAGMVAALGSKDSSYLRIGA 295
AVPKKILDLMNVE +TRENVASHLQK+RLYLKR+S + + QA +VAALG ++ +Y + +
Sbjct: 224 AVPKKILDLMNVENITRENVASHLQKYRLYLKRMSMDASRQANLVAALGGRNPAYGNMNS 283
Query: 296 LDGFGDLRSLNSPGRLSSSAISSSYVPGNMFGRFNSTSGLSMHGIASSGMIQPGHSQS-F 354
LD F N+ GR ++ N+ R NS S MHG+ SS +Q GH+Q+
Sbjct: 284 LDVFRHYN--NAYGRYPPVPTTTHSQSNNLVARMNSPSAFGMHGLLSSQPLQHGHAQTNM 341
Query: 355 NTSFNTIGKIQQAMFPANRISNLFQGVRTSSELN 388
TS N +G M A ++ + G +S N
Sbjct: 342 GTSLNDLGVNNGNMIRAAQMPTMVTGTSCNSFTN 375
>gi|357137423|ref|XP_003570300.1| PREDICTED: two-component response regulator ARR12-like
[Brachypodium distachyon]
Length = 671
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 220/393 (55%), Positives = 272/393 (69%), Gaps = 12/393 (3%)
Query: 18 DKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDV 77
D+FP+GMRVLAVDDDP CLKVLE LR CQY VT TNQAV AL+MLRENR+ FDLVISDV
Sbjct: 15 DQFPVGMRVLAVDDDPVCLKVLETLLRRCQYHVTATNQAVIALRMLRENRDMFDLVISDV 74
Query: 78 HMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQ 137
HMPDMDGFKLLE VGLEMDLPVIMLS G+TK VMKGITHGACDYLLKPVRIEEL+NIWQ
Sbjct: 75 HMPDMDGFKLLELVGLEMDLPVIMLSGNGETKTVMKGITHGACDYLLKPVRIEELRNIWQ 134
Query: 138 HVIRRKKVGPKDQNKLLNQENSRVGAGEGG--QGAMSTGNSDQNGKSNRKRKD-QDGDED 194
HV+RRK P N +E ++ + G ++ G+ DQNG+ N+KRKD +E
Sbjct: 135 HVVRRKFSTPDYVNLDTYEECNKPPNADSGYVYSQVTCGSPDQNGRPNKKRKDYHSEEEG 194
Query: 195 EDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRE 254
ED + +G +++D + K+PRVVW+ ELHRKFV AVN LG+DKAVPK+IL+LMNVE LTRE
Sbjct: 195 EDEESNGQDDDDPSAPKRPRVVWSVELHRKFVAAVNHLGIDKAVPKRILELMNVEKLTRE 254
Query: 255 NVASHLQKFRLYLKRLSN-ETPQAGMVAALGSKDSSYLRIGALDGFGDLRSLNSPGRLSS 313
NVASHLQK+RLYL+RLS + QAG+VA+LG KD +LR+GA +G ++ SP
Sbjct: 255 NVASHLQKYRLYLRRLSAVASQQAGIVASLGGKD-HFLRMGAFEGLQGYQAFTSP----- 308
Query: 314 SAISSSYVPGNMFGRFNSTSGLSMHGIASSGMIQPGH-SQSFNTSFNTIGKIQQAMFPAN 372
+A+ S G + N+ + L + G+ASS IQ S + N S K ++ N
Sbjct: 309 TALPSFSAHGLLNSPRNNQTALVIQGLASSRSIQTASGSSTTNHSIVDANKYHLSLR-GN 367
Query: 373 RISNLFQGVRTSSELNQLPQSKSTTQIGDFNHI 405
+ NL QG+ TS QL Q + GD + I
Sbjct: 368 QQGNLAQGLVTSLGPAQLQQKFINEETGDLSTI 400
>gi|326500594|dbj|BAJ94963.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 623
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/348 (58%), Positives = 254/348 (72%), Gaps = 15/348 (4%)
Query: 20 FPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM 79
FP+GMRVLAVDDDPTCLKVLEN LR C Y VT T QA TAL+MLREN++ FDLVISDVHM
Sbjct: 18 FPVGMRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHM 77
Query: 80 PDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
PDMDGFKLLE VGLEMDLPVIMLSA G+T+ VMKGITHGACDYLLKPVR+E+LK IWQHV
Sbjct: 78 PDMDGFKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHV 137
Query: 140 IRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDD 199
IRR N +Q+ G +G G +++N + +R+ +D++GD+ +D D+
Sbjct: 138 IRRNTKNRGSDNDDASQK------GPNAEG--ENGGANRNKRQSRRDRDENGDDGDDSDE 189
Query: 200 DGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASH 259
+ ++N DS++QKKPRVVW+ ELHRKFV AVNQLG+DKAVPKKILDLMNVE +TRENVASH
Sbjct: 190 NSNDNGDSSSQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVENITRENVASH 249
Query: 260 LQKFRLYLKRLS-NETPQAGMVAALGSKDSSYLRIGALDGFGDLRSLNSPGRLSSSAISS 318
LQK+RLYLKR+S + + QA +VAALG ++ +Y + ++D F N+ GR S+
Sbjct: 250 LQKYRLYLKRMSMDASRQANLVAALGGRNPAYSNMNSMDVFRHYN--NAYGRYRPVPTST 307
Query: 319 SYVPGNMFGRFNSTSGLSMHGIAS--SGMIQPGHSQSFN--TSFNTIG 362
N+ R NS S MHG+ S S + GH+Q+ N TS N +G
Sbjct: 308 HSQSNNLVARMNSPSAYGMHGLLSPQSQPLHLGHAQNNNLGTSLNDLG 355
>gi|242066838|ref|XP_002454708.1| hypothetical protein SORBIDRAFT_04g035980 [Sorghum bicolor]
gi|241934539|gb|EES07684.1| hypothetical protein SORBIDRAFT_04g035980 [Sorghum bicolor]
Length = 675
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 221/410 (53%), Positives = 279/410 (68%), Gaps = 16/410 (3%)
Query: 1 MTAEERMGSAGCEDGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTAL 60
M EER + G D+FP+GMRVLAVDDDP CLKVLEN LR CQY VT TNQAV AL
Sbjct: 1 MRPEERNAAVGRVR---DQFPVGMRVLAVDDDPVCLKVLENLLRRCQYRVTTTNQAVVAL 57
Query: 61 KMLRENRNNFDLVISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGAC 120
+MLR+NR+ FDLVISDVHMPDMDGFKLLE VGLEMDLPVIMLS G+TK VMKGITHGAC
Sbjct: 58 RMLRQNRDLFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSVNGETKTVMKGITHGAC 117
Query: 121 DYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRVGAGEGG--QGAMSTGNSDQ 178
DYLLKPVR+EEL+NIWQHV+RRK + N +E +R + ++ G DQ
Sbjct: 118 DYLLKPVRLEELRNIWQHVVRRKFSNCERANIDGYEECTRPSNADFDHVHSQITGGTPDQ 177
Query: 179 NGKSNRKRKD-QDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKA 237
+G+S++KRK+ +EDE + +G EN+D + KKPRVVW+ ELHRKFV AVNQLG+DKA
Sbjct: 178 SGRSSKKRKEYHSEEEDEGEESNGQENDDPSAPKKPRVVWSVELHRKFVAAVNQLGIDKA 237
Query: 238 VPKKILDLMNVEGLTRENVASHLQKFRLYLKRLSN-ETPQAGMVAALGSKDSSYLRIGAL 296
VPK+IL+LMNVE LTRENVASHLQK+RLYLKRLS + QA +VAA G D ++R+GA
Sbjct: 238 VPKRILELMNVERLTRENVASHLQKYRLYLKRLSAVASQQASIVAAFGGND-PFMRMGAF 296
Query: 297 DGFGDLRSLNSPGRLSSSAISSSYVPGNMFGRFNSTSGLSMHGIASSGMIQPGHSQSFNT 356
+G +S +SSA S+ P + R NS + ++ G+++S IQ + + +
Sbjct: 297 EGLQGYQS------FASSAALPSFTPQGLLNR-NSPTSFALQGMSASRPIQIASNSTISH 349
Query: 357 SFNTIGKIQQAM-FPANRISNLFQGVRTSSELNQLPQSKSTTQIGDFNHI 405
S + K ++ ++R NL QG+ TS QLPQ + D + I
Sbjct: 350 SISDPNKYHLSLPGTSSRQGNLAQGLTTSVGQVQLPQKWIHEETDDLSTI 399
>gi|115466774|ref|NP_001056986.1| Os06g0183100 [Oryza sativa Japonica Group]
gi|55771374|dbj|BAD72541.1| putative response regulator 9 [Oryza sativa Japonica Group]
gi|113595026|dbj|BAF18900.1| Os06g0183100 [Oryza sativa Japonica Group]
gi|118790746|tpd|FAA00255.1| TPA: response regulator [Oryza sativa Japonica Group]
gi|215736874|dbj|BAG95803.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222635081|gb|EEE65213.1| hypothetical protein OsJ_20357 [Oryza sativa Japonica Group]
Length = 696
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 221/397 (55%), Positives = 280/397 (70%), Gaps = 24/397 (6%)
Query: 1 MTAEERMGSAGCEDGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTAL 60
+ EER G G E D+FP+GMRVLAVDDDP CLKVLE LR CQY VT TNQA+TAL
Sbjct: 6 LRMEERKGLMGRER---DQFPVGMRVLAVDDDPVCLKVLETLLRRCQYHVTSTNQAITAL 62
Query: 61 KMLRENRNNFDLVISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGAC 120
K+LRENR+ FDLVISDVHMPDMDGFKLLE VGLEMDLPVIMLS G+TK VMKGITHGAC
Sbjct: 63 KLLRENRDMFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSVNGETKTVMKGITHGAC 122
Query: 121 DYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKL-LNQENSRVGAGEGGQGAM--STGNSD 177
DYLLKPVRIEEL+NIWQHV+RR K G +++N L ++E ++ + + G + G+SD
Sbjct: 123 DYLLKPVRIEELRNIWQHVVRR-KFGNRERNNLDFSKECNKPQSADTDHGPYQPTCGSSD 181
Query: 178 QNGKSNRKRKDQDGDEDEDGDDDGH-ENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDK 236
QNG+S+RKRK+ G++D++GDD+ + EN++ + KKPRVVW+ ELHRKFV AVNQLG+DK
Sbjct: 182 QNGRSSRKRKELHGEDDDEGDDNDYQENDEPSAAKKPRVVWSVELHRKFVAAVNQLGIDK 241
Query: 237 AVPKKILDLMNVEGLTRENVASHLQKFRLYLKRL-SNETPQAGMVAALGSKDSSYLRIGA 295
AVPK+IL+LMNVE LTRENVASHLQK+RLYLKRL + + QA +VAA G +D S+L IGA
Sbjct: 242 AVPKRILELMNVEKLTRENVASHLQKYRLYLKRLGAVASQQASIVAAFGGRDPSFLHIGA 301
Query: 296 LDGFGDLRSLNSPGRLSSSAISSSYVPGNMFGRFNSTSGLSMHGIASSGMIQPGHSQSFN 355
+G L S + SA S+ P + R ++ + + +A+ P + +
Sbjct: 302 FEG------LQSYQPFAPSAALPSFNPHGLLTRTSAAAAFGLQELAA-----PSSTIQTS 350
Query: 356 TSFNTIGKIQQAMFPANRISNLFQGVRTSSELNQLPQ 392
T T+G N+ +NL QG+ + QL Q
Sbjct: 351 TGNVTVGHC----LEENQQANLAQGLTAAIGQPQLQQ 383
>gi|413952914|gb|AFW85563.1| putative two-component response regulator family protein [Zea mays]
Length = 669
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 274/690 (39%), Positives = 379/690 (54%), Gaps = 68/690 (9%)
Query: 18 DKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDV 77
D+FP+GMRVLAVDDDP CLKVLE LR CQY V TNQA+TALK+LRENR+ FDLVISDV
Sbjct: 22 DQFPVGMRVLAVDDDPVCLKVLETLLRRCQYHVITTNQAITALKLLRENRDMFDLVISDV 81
Query: 78 HMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQ 137
HMPDMDGFKLLE VGLEMDLPVIMLS G+TK VMKGITHGACDYLLKPVRIEEL+NIWQ
Sbjct: 82 HMPDMDGFKLLELVGLEMDLPVIMLSVNGETKSVMKGITHGACDYLLKPVRIEELRNIWQ 141
Query: 138 HVIRRKKVGPKDQNKLLNQENSRVGAGEG------GQGAMSTGNSDQNGKSNRKRKDQDG 191
HV+RRK + N + ++ +R+ + G G + G SDQ+G+ RKRK+
Sbjct: 142 HVVRRKFSKRERSNLDVYKDFNRLPGADPCHSHGHGHGQTTAGASDQSGRIGRKRKEMHS 201
Query: 192 DEDEDGDDDG-HENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEG 250
DE++DG+++ E ++ + KKPRVVW+ ELHRKFV AVNQLG+DKAVPK+IL+LMNVE
Sbjct: 202 DEEDDGEENDFQEGDEPSAAKKPRVVWSIELHRKFVAAVNQLGIDKAVPKRILELMNVEK 261
Query: 251 LTRENVASHLQKFRLYLKRLSN-ETPQAGMVAALGSKDSSYLRIGALDGFGDLRSLNSPG 309
LTRENVASHLQK+RLYLKRLS + QA +VAA G +D +L +GA +G L S
Sbjct: 262 LTRENVASHLQKYRLYLKRLSAVASQQASIVAAFGGRD-PFLHMGAFEG------LQSYQ 314
Query: 310 RLSSSAISSSYVP---------GNMFGRFNSTSGLSMHGIASSGMIQPGHSQSFNTSFNT 360
+ A SS++P FG +++ AS+GMI H + F
Sbjct: 315 PFAPCAALSSFIPHHGSLGRTTAAAFGVPELAPAITVQAAASNGMIS--HCAGDASKFQL 372
Query: 361 IGKIQQAMFPANRISNLFQGVRTSSELNQLPQSKSTTQIGDFNHINSPTTSMAATGFTDA 420
G IQ+ N+ NL QG TS L QL Q + GD + + S G A
Sbjct: 373 SG-IQE-----NQQPNLGQGSATSLGLPQLQQKWIQQETGDLSAVFS--------GSALA 418
Query: 421 TVAVGSSSSSVSTSSSNIMMLQGNLHQAHSRDAYGNQSSLSVASLNQESFDVGVRNSSNF 480
G+ S+ +L+G + Q +++AS++ E + V S+N
Sbjct: 419 NTLSGALQRVASSPLPPQELLEG------VQTKVSAQPPITMASVSSELVERTVGVSANL 472
Query: 481 LDHSRCNESWQDAVQLSSNSLPLSEPFIHDQMPPNLRNTLSSTSCLDISSSMATS----- 535
QD+ +LP+++ F D++ L++ S + S +M
Sbjct: 473 ----------QDSGISPQGTLPINDGFTADKL--QLQDPFDSNGGTNFSVNMPVCPSGSL 520
Query: 536 THLEDSRGDL-SCQPGLIGNVIQNYTSKQQW-LEHKQGYNQNLNNPFSNVNTLLSG--NC 591
T +++G SC P L+ +++ Q+ + G++ N L +G N
Sbjct: 521 TASSNAKGGASSCSPVLLAPDTGRHSNYLQFGVAGNSGHDMNDIKQDHLHQGLSTGGFNH 580
Query: 592 TMGPFSQSMDQSNSPYIAQLTGVEKAPLNTKLRSNDDFLLEQSKSHDGFIQNNYDPMDDM 651
G N PY+ KL+ + + L K H GF ++ + D +
Sbjct: 581 DFGTCMTEQTDPNVPYLMPQMKPNTLSSEDKLKQRNIYDLGIPKLHGGFSSSSCN-FDGL 639
Query: 652 MSGILKRDSNETILMDGELGFDAYSLSSCM 681
++ ++K + ++ D +LG D + L +C+
Sbjct: 640 LNSMIKAEKDDLSFTDSDLGCDFFPLGACI 669
>gi|115449219|ref|NP_001048389.1| Os02g0796500 [Oryza sativa Japonica Group]
gi|47497030|dbj|BAD19083.1| putative response regulator 9 [Oryza sativa Japonica Group]
gi|47497239|dbj|BAD19284.1| putative response regulator 9 [Oryza sativa Japonica Group]
gi|113537920|dbj|BAF10303.1| Os02g0796500 [Oryza sativa Japonica Group]
gi|118790756|tpd|FAA00256.1| TPA: response regulator [Oryza sativa Japonica Group]
gi|215704573|dbj|BAG94206.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767879|dbj|BAH00108.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623845|gb|EEE57977.1| hypothetical protein OsJ_08721 [Oryza sativa Japonica Group]
Length = 688
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 248/544 (45%), Positives = 325/544 (59%), Gaps = 49/544 (9%)
Query: 2 TAEERMGSAGCEDGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALK 61
AEER G D+FP+GMRVLAVDDDP CLKVLE L CQY VT TNQA ALK
Sbjct: 3 AAEERKGVVPAARRR-DQFPVGMRVLAVDDDPVCLKVLETLLLRCQYHVTTTNQAAIALK 61
Query: 62 MLRENRNNFDLVISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACD 121
MLRENR+ FDLVISDVHMPDMDGFKLLE VGLEMDLPVIMLS G+TK V+KGITHGACD
Sbjct: 62 MLRENRDMFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSVNGETKTVLKGITHGACD 121
Query: 122 YLLKPVRIEELKNIWQHVIRRKKVGPKDQ---------NKLLNQENSRVGAGEGGQGAMS 172
YLLKPVRIEEL+NIWQHVIRR K +D+ NK N ++ V G ++
Sbjct: 122 YLLKPVRIEELRNIWQHVIRR-KFSTRDRANLDFYEECNKPPNADSDHV------HGHVT 174
Query: 173 TGNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQL 232
G+ DQ+G+ ++KRK+ +E+++G+ + + +D + KKPRVVW+ ELHRKFV AVNQL
Sbjct: 175 CGSPDQSGRPSKKRKEYCSEEEDEGEVNTQDIDDPSAPKKPRVVWSVELHRKFVAAVNQL 234
Query: 233 GVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKRLSN-ETPQAGMVAALGSKDSSYL 291
G+DKAVPK+IL+LMNVE LTRENVASHLQK+RLYLKRLS + Q +VAALG +D +L
Sbjct: 235 GIDKAVPKRILELMNVEKLTRENVASHLQKYRLYLKRLSAVASQQVSIVAALGGRD-PFL 293
Query: 292 RIGALDGFGDLRSLNSPGRLSSSAISSSYVP-GNMFGRFNSTSGLSMHGIASSGMIQP-G 349
+G +G ++ +SSA SS+ P G + N+ + L G+ +S IQ
Sbjct: 294 HMGGFEGLQGYQA------FTSSAALSSFTPHGLLNSPRNNPAALGTQGVPASKSIQTMS 347
Query: 350 HSQSFNTSFNTIGKIQQAMFPANRISNLFQGVRTSSELNQLPQSKSTTQIGDFNHINSPT 409
S + + S N K ++ P N+ NL QG+ TS Q+ Q + D +
Sbjct: 348 GSHTLSHSINDANKYHLSL-PGNQKGNLGQGLATSLGQTQMQQKWIHEETDDL------S 400
Query: 410 TSMAATGFTDATVAVGSSSSSVSTSSSNIMMLQGNLHQAHSRDAYGNQSSLSVASLNQES 469
T ++ G ++ G S + S +SS +L L + ++ +Q S+ +S++ E
Sbjct: 401 TILSGNGLSN-----GMSGTLQSVTSSP--LLPQELAEC-TQAKIVSQPSIRTSSVSSEH 452
Query: 470 FDVGVRNSSNFLDHSRCNESWQDAVQLSSNSLPLSEPFIHDQMPPNLRNTL--SSTSCLD 527
+ V SS L+ +S S+N L IH N L +S+SC
Sbjct: 453 IEGAVGVSSGLLESRVSQQSTIPLSGFSANGL-----LIHGSFNNTCANKLGGTSSSCAP 507
Query: 528 ISSS 531
SS
Sbjct: 508 ARSS 511
>gi|218191747|gb|EEC74174.1| hypothetical protein OsI_09283 [Oryza sativa Indica Group]
Length = 688
Score = 390 bits (1003), Expect = e-105, Method: Compositional matrix adjust.
Identities = 247/544 (45%), Positives = 324/544 (59%), Gaps = 49/544 (9%)
Query: 2 TAEERMGSAGCEDGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALK 61
AEER G D+FP+GMRVLAVDDDP CLKVLE L CQY VT TNQA ALK
Sbjct: 3 AAEERKGVVPAARRR-DQFPVGMRVLAVDDDPVCLKVLETLLLRCQYHVTTTNQAAIALK 61
Query: 62 MLRENRNNFDLVISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACD 121
MLRENR+ FDLVISDVHMPDMDGFKLLE VGLEMDLPVIMLS G+TK V+KGITHGACD
Sbjct: 62 MLRENRDMFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSVNGETKTVLKGITHGACD 121
Query: 122 YLLKPVRIEELKNIWQHVIRRKKVGPKDQ---------NKLLNQENSRVGAGEGGQGAMS 172
YLLKPVRIEEL+NIWQHVIRR K +D+ NK N ++ V G ++
Sbjct: 122 YLLKPVRIEELRNIWQHVIRR-KFSTRDRANLDFYEECNKPPNADSDHV------HGHVT 174
Query: 173 TGNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQL 232
G+ DQ+G+ ++KRK+ +E+++G+ + + +D + KKPRVVW+ ELHRKFV AVNQL
Sbjct: 175 CGSPDQSGRPSKKRKEYCSEEEDEGEVNTQDIDDPSAPKKPRVVWSVELHRKFVAAVNQL 234
Query: 233 GVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKRLSN-ETPQAGMVAALGSKDSSYL 291
G+DKAVPK+IL+LMNVE LTRENVASHLQK+RLYLKRLS + Q +VAALG +D +L
Sbjct: 235 GIDKAVPKRILELMNVEKLTRENVASHLQKYRLYLKRLSAVASQQVSIVAALGGRD-PFL 293
Query: 292 RIGALDGFGDLRSLNSPGRLSSSAISSSYVP-GNMFGRFNSTSGLSMHGIASSGMIQP-G 349
+G +G ++ +SSA SS+ P G + N+ + L G+ +S IQ
Sbjct: 294 HMGGFEGLQGYQA------FTSSAALSSFTPHGLLNSPRNNPAALGTQGVPASKSIQTMS 347
Query: 350 HSQSFNTSFNTIGKIQQAMFPANRISNLFQGVRTSSELNQLPQSKSTTQIGDFNHINSPT 409
S + + S N K ++ P N+ NL QG+ S Q+ Q + D +
Sbjct: 348 GSHTLSHSINDANKYHLSL-PGNQKGNLGQGLAASLGQTQMQQKWIHEETDDL------S 400
Query: 410 TSMAATGFTDATVAVGSSSSSVSTSSSNIMMLQGNLHQAHSRDAYGNQSSLSVASLNQES 469
T ++ G ++ G S + S +SS +L L + ++ +Q S+ +S++ E
Sbjct: 401 TILSGNGLSN-----GMSGTLQSVTSSP--LLPQELAEC-TQAKIVSQPSIRTSSVSSEH 452
Query: 470 FDVGVRNSSNFLDHSRCNESWQDAVQLSSNSLPLSEPFIHDQMPPNLRNTL--SSTSCLD 527
+ V SS L+ +S S+N L IH N L +S+SC
Sbjct: 453 IEGAVGVSSGLLESRVSQQSTIPLSGFSANGL-----LIHGSFNNTCANKLGGTSSSCAP 507
Query: 528 ISSS 531
SS
Sbjct: 508 ARSS 511
>gi|357480191|ref|XP_003610381.1| Two-component response regulator EHD1 [Medicago truncatula]
gi|355511436|gb|AES92578.1| Two-component response regulator EHD1 [Medicago truncatula]
Length = 593
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 264/639 (41%), Positives = 366/639 (57%), Gaps = 73/639 (11%)
Query: 18 DKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDV 77
+ FP+GMRVLAVDDD TCLK+LE FL C+Y VT T + V AL++LRE R+ FDLVISDV
Sbjct: 15 EDFPVGMRVLAVDDDQTCLKLLEKFLLMCKYNVTTTTKPVEALELLREKRDMFDLVISDV 74
Query: 78 HMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQ 137
MP+MDGFKLLE VGLE+DLP IMLS D + VMKG+ GACDYL+KP+R+EELKNIWQ
Sbjct: 75 SMPEMDGFKLLEQVGLEIDLPFIMLSGNDDRERVMKGVMKGACDYLVKPIRLEELKNIWQ 134
Query: 138 HVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDG 197
HV+ RKK+ KD+NK + + G Q S +++N +K K+Q DE+E+
Sbjct: 135 HVV-RKKIESKDRNKGI------ITDGICSQDTSSENIANRNKTRGQKIKEQSEDEEEEE 187
Query: 198 DDDGHENEDS-TTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENV 256
++ +N++ +T+KKPR+VW ELH+KFV V+QL +A PKKI DLMNVEGLTRENV
Sbjct: 188 EEAEEDNDEERSTRKKPRLVWDDELHKKFVSIVSQL---EAYPKKICDLMNVEGLTRENV 244
Query: 257 ASHLQKFRLYLKRLSNETPQAGMVAALGSKDSSYLRIGALDGFGDLRSLNSPGRLSSSAI 316
ASHLQK++L LKR S QA + AAL +L+ ++ G+GD +L R+ SS +
Sbjct: 245 ASHLQKYKLSLKRPSK---QARVDAAL----DPHLQKNSVAGYGDFCTLPGSRRILSSTL 297
Query: 317 SSSYVPGNMFGRFNSTSGLSMHGIASSGMIQPGHSQSFNTSFNTIGKIQQAMFPANRISN 376
+Y NMF R N+ SGL++ G++SS ++ P SQ+ I +Q +F A+ S+
Sbjct: 298 -PTYASSNMFCRLNAPSGLNLRGMSSSALVPPLQSQN-------IPSYKQPLFFASESSS 349
Query: 377 LFQGVRTSSELNQLPQSKSTTQIGDFNHINSPTTSMAATGFTDATVAVGSSSSSVSTSSS 436
+GVRTS E+NQ Q+ + I+ + ++GF D V +++S +S SS
Sbjct: 350 ALKGVRTSVEINQFQQNIYPPGNMKLSPIDDSSAFTDSSGFQDIRANVNNANSFLSCISS 409
Query: 437 NIMMLQGNLHQAHSRDAYGNQSSLSVASLNQESFDVGVRNSSNFLDHSRCNESWQDAVQL 496
N + Q H+ A+ N S+ ++ Q+SF+ S NF
Sbjct: 410 NHL-------QTHNSRAFINHPSVGGPAMEQKSFNPATSGSYNF---------------- 446
Query: 497 SSNSLPLSEPFIHDQMPPNLRNTLSSTSCL-----DISSSMATSTHLEDSRGDLSCQPGL 551
+SN PLSE F +DQ+ N S +S D SS LE++ + CQ GL
Sbjct: 447 ASNPSPLSEDFNNDQISHNSLKFASLSSQFKKNPDDFSSIRVIDVPLEET---MQCQDGL 503
Query: 552 IGNVIQN--YTSKQQWLEHKQGYNQNLNNPFSNVNTLLSGNCTMGPFSQSMDQSNSPYIA 609
+G+V+ YT H+Q + N NTL S N S+ Q+ SP I
Sbjct: 504 LGSVVTASCYT-------HQQNVGSSFN------NTLDSSNADTSSMVHSVPQTISPLIT 550
Query: 610 QLTGVEKAPLNTK-LRSNDDFLLEQSKSHDGFIQNNYDP 647
Q+ VEK + + + SN D EQ DGF+QN+ P
Sbjct: 551 QMPVVEKFYSDERTMESNGDCFFEQLLDVDGFVQNSSLP 589
>gi|357480195|ref|XP_003610383.1| Two-component response regulator EHD1 [Medicago truncatula]
gi|355511438|gb|AES92580.1| Two-component response regulator EHD1 [Medicago truncatula]
Length = 597
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 258/636 (40%), Positives = 358/636 (56%), Gaps = 70/636 (11%)
Query: 20 FPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM 79
FP GMRVLAVDDDPT LKVLE L C Y VT T + V AL++LRE ++ FDLVISDV M
Sbjct: 20 FPAGMRVLAVDDDPTYLKVLEKQLLTCNYNVTTTTKPVEALELLREKKDMFDLVISDVSM 79
Query: 80 PDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
PDMDGFKLLE VGLEMDLP IMLS D + VMK + HGAC+YL+KP+R+EELK+IWQHV
Sbjct: 80 PDMDGFKLLEQVGLEMDLPFIMLSVNDDIEKVMKSVIHGACNYLVKPIRMEELKSIWQHV 139
Query: 140 IRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDD 199
+ RKK+ KDQN+ + + G GQ S +++N RKRK+Q +E+ + D+
Sbjct: 140 V-RKKIESKDQNQGI------ISDGVYGQDTSSENIANKNKMHGRKRKEQTEEEEAEQDN 192
Query: 200 DGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVD-------KAVPKKILDLMNVEGLT 252
D E +T+KKPR+VW ELHRKFV AVN +G+D +A PKKILDLMNVEGLT
Sbjct: 193 D----EKCSTRKKPRLVWDHELHRKFVSAVNHVGLDISSTVIAEASPKKILDLMNVEGLT 248
Query: 253 RENVASHLQKFRLYLKRLSNETPQAGMVAALGSKDSSYLRIGALDGFGDLRSLNSPGRLS 312
RENV+SHLQ++R+ +K LS + + Y + G++ G+GD +L+ R+
Sbjct: 249 RENVSSHLQRYRIDIKWLSKQDRGDDAL-------DPYQQKGSVGGYGDFCTLSGSTRVL 301
Query: 313 SSAISSSYVPGNMFGRFNSTSGLSMHGIASSGMIQPGHSQSFNTSFNTIGKIQQAMFPAN 372
SS I +Y +MF R N+ S L++ G++SS ++ P S + I + MF +
Sbjct: 302 SS-ILPAYASNDMFCRLNAPSSLNLEGMSSSALVPPLQSHN-------IPNFETPMFSES 353
Query: 373 RISNLFQGVRTSSELNQLPQSKSTTQIGDFNHINSPTTSMAATGFTDATVAVGSSSSSVS 432
S+ G++TS ++NQ Q+ + + I+ ++ F D V +++ S+S
Sbjct: 354 ESSSSVHGIQTSMDINQFQQNIYLPDNINLSPIDDSNAVTDSSSFQDIGATVNNANVSLS 413
Query: 433 TSSSNIMMLQGNLHQAHSRDAYGNQSSLSVASLNQESFDVGVRNSSNFLDHSRCNESWQD 492
SSN + Q H A+ N S + A++ +SF+ SSNF
Sbjct: 414 CISSNHI-------QTHKSGAFINHSHVEGAAVKTQSFNPVTSGSSNF------------ 454
Query: 493 AVQLSSNSLPLSEPFIHDQMPPNLRNTLSSTSCLDISSSMATSTHLEDSRGDLSCQPGLI 552
+SNS+PLSE F +DQM N S +S SS+ + LE++ + CQ GL+
Sbjct: 455 ----ASNSVPLSEDFNNDQMLHNNFKFASPSS--HFSSTDIVAVPLEET---MQCQDGLL 505
Query: 553 GNVIQNYTSKQQWLEHKQGYNQNLNNPFSNVNTLLSGNCTMGPFSQSMDQSNSPYIAQLT 612
GNVI W Q + + NN ++ L S N + Q+NS I Q+
Sbjct: 506 GNVI-----NAPWYTQHQNASSSFNN---TLDYLASSNGDTSSMVHGLAQTNSSLITQMP 557
Query: 613 GVEKAPLNTK-LRSNDDFLLEQSKSHDGFIQNNYDP 647
VEK + + + SN D EQ S DGFIQN+ P
Sbjct: 558 EVEKFYSDERTMESNGDCFYEQLLSLDGFIQNSCVP 593
>gi|297796727|ref|XP_002866248.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297312083|gb|EFH42507.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 642
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 272/690 (39%), Positives = 381/690 (55%), Gaps = 84/690 (12%)
Query: 13 EDGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDL 72
EDG DKFP+GMRVLAVDD+PTCL+ LE L C+Y VT T ++ AL++LREN N FDL
Sbjct: 7 EDGRHDKFPVGMRVLAVDDNPTCLRKLEELLLRCKYHVTKTMESRKALELLRENSNMFDL 66
Query: 73 VISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEEL 132
VISDV MPD DGFKLLE +GLEMDLPVIMLSA+ D VMKGI HGACDYL+KPV ++EL
Sbjct: 67 VISDVEMPDTDGFKLLE-IGLEMDLPVIMLSAHSDYDSVMKGIIHGACDYLVKPVGLKEL 125
Query: 133 KNIWQHVIRR------KKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKR 186
+NIW HV+++ K +GP Q LL S + + +S S+R+
Sbjct: 126 QNIWHHVVKKNIKSYAKNIGPSRQ--LLPPSESNLVPSASKKRKEKANDSGDEDDSDREE 183
Query: 187 KDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLM 246
D +G E +DGD+ G T+KKPRVVW+ ELH+KFV AV QLG+DKAVPKKILDLM
Sbjct: 184 DDGEGSE-QDGDEAG-------TRKKPRVVWSQELHQKFVSAVQQLGLDKAVPKKILDLM 235
Query: 247 NVEGLTRENVASHLQKFRLYLKRLSNETPQAGMVAALGSKDSSYLRIGALDGFGDL---R 303
++EGLTRENVASHLQK+RLYLK++ Q A G++DSSY ++ LDG D R
Sbjct: 236 SIEGLTRENVASHLQKYRLYLKKIDEGQQQNMTPDAFGTRDSSYFQMAQLDGLRDFTATR 295
Query: 304 SLNSPGRLSSSAISSSYVPGNMFGRFNSTSGLSMHGIASSGMIQPGHSQSFNTSFNTIGK 363
+ S G LS S ++ P M+ S +++ G+ SS IQ GH + + S N G
Sbjct: 296 QIPSSGLLSRSHLTKLQPP--MY------SSINLQGMNSSSFIQQGHHHNSSNSANPFGT 347
Query: 364 IQQAMFPANRISNLFQGVRTSSELNQLPQSKSTTQIGDFNHINSPTTSMAATGFTDATVA 423
+ P + NLFQ RTSS L L +S + IGDF I F D+ +
Sbjct: 348 YHTTLSPRIQNVNLFQ--RTSSPLETLQFPRSKSYIGDFKGIGD---RAVGGSFLDSCMP 402
Query: 424 VGSSSSSVSTSSSNIMMLQGNLHQAHSRDAYGNQSSLSVASLNQESFDVGVRNSSNFLDH 483
GSSS+S+ ++S+N +MLQ N Q + GNQ + N S ++ + S F H
Sbjct: 403 FGSSSTSLPSASTNTLMLQANYTQPLHISSDGNQPCIEGTPSNSASPNISFQGLSRFPSH 462
Query: 484 SRCNESWQ---DAVQLSSNSLPLSEPFIHDQMPPNLRNTLSSTSCLDISSSMATSTHLED 540
SWQ + + +SLPL+ F+ DQ+ T + + D +S ++ +
Sbjct: 463 -----SWQGNLNTTRFPPSSLPLNPAFLPDQV------TCAGNNLGDCTSLVSAG----N 507
Query: 541 SRGDLSCQPGLIGNVIQNYTS--KQQWLEHKQGYNQNLNNPFSNVNTLLSGNCTM----- 593
G++ C+P L+G +QN Q+W +Q LNNPF N+ L + +
Sbjct: 508 PGGEIQCEPQLLGGFMQNMNPLDGQKW---EQQNCTMLNNPFGNIEYPLPADNMVFRDNN 564
Query: 594 GPFSQSMDQS-------NSPYIAQLTGVEKAPLNTKLRSNDDFLLEQSKSHDGFIQNNYD 646
S+ +D+S + Y+ + T + + + ND N +D
Sbjct: 565 ATRSKGLDESLMNPIDNSQEYVGKATTMLDPEMKSGKPEND---------------NQHD 609
Query: 647 PMDDMMSGILKRDSNETIL-MDGELGFDAY 675
DD+M+ ++K++ N ++ + GFD++
Sbjct: 610 VFDDLMNEMMKQEENNGMVSVATRFGFDSF 639
>gi|242092234|ref|XP_002436607.1| hypothetical protein SORBIDRAFT_10g005580 [Sorghum bicolor]
gi|241914830|gb|EER87974.1| hypothetical protein SORBIDRAFT_10g005580 [Sorghum bicolor]
Length = 659
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 271/688 (39%), Positives = 389/688 (56%), Gaps = 66/688 (9%)
Query: 18 DKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDV 77
D+FP+GMRVLAVDDDP CLKVLE LR CQY VT TNQA+TALKMLRENR+ +DLVISDV
Sbjct: 14 DQFPVGMRVLAVDDDPVCLKVLETLLRRCQYHVTTTNQAITALKMLRENRDTYDLVISDV 73
Query: 78 HMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQ 137
HMPDMDGFKLLE VGLEMDLPVIMLS G+TK VMKGITHGACDYLLKPVRIEEL+NIWQ
Sbjct: 74 HMPDMDGFKLLELVGLEMDLPVIMLSVNGETKSVMKGITHGACDYLLKPVRIEELRNIWQ 133
Query: 138 HVIRRKKVGPKDQNKLLNQENSRVGAGEG--GQGAMSTGNSDQNGKSNRKRKDQDGDEDE 195
HV+RRK + N + ++ +++ + + G ++ G SDQ+G+ ++KRK+ DE++
Sbjct: 134 HVVRRKFSKRERSNLDIYKDFNKLPSADPCHGHNQITAGASDQSGRISKKRKEMHSDEED 193
Query: 196 DGDDDG-HENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRE 254
DG+++ E ++ + KKPRVVW+ ELHRKFV AVNQLG+DKAVPK+IL+LMNVE LTRE
Sbjct: 194 DGEENDFQEGDEPSAAKKPRVVWSVELHRKFVAAVNQLGIDKAVPKRILELMNVEKLTRE 253
Query: 255 NVASHLQKFRLYLKRLSN-ETPQAGMVAALGSKDSSYLRIGALDGFGDLRSLNSPGRLSS 313
NVASHLQK+RLYLKRLS + QA +VAA G +D ++L +GA +G L S +
Sbjct: 254 NVASHLQKYRLYLKRLSAVASQQASIVAAFGGRDPAFLHMGAFEG------LQSYQPFAP 307
Query: 314 SAISSSYVPGNMFGRFNSTSGLSMHGIASSGMIQPGHSQS-FNTSFNTIGKIQQAMFPAN 372
A SS+ P + GR S + + +A + +Q + + Q + N
Sbjct: 308 CAALSSFSPHGLLGR-TSAATFGVPELAPAMTVQTATNNGIISHCAGDANDFQLSGLQEN 366
Query: 373 RISNLFQGVRTSSELNQLPQSKSTTQIGDFNHINSPTTSMAATGFTDATVAVGSSSSSVS 432
+ +NL QG TS L QL Q + D + + F+ + +A + S ++
Sbjct: 367 QQANLGQGSATSLGLPQLQQKWIQQETNDLSAV-----------FSGSALA-NTLSGALQ 414
Query: 433 TSSSNIMMLQGNLHQAHSRDAYGNQSSLSVASLNQESFDVGVRNSSNFLDHSRCNESWQD 492
+S+ + Q L A S+ + + +++ E + V S+N D S S Q
Sbjct: 415 RVTSSPLPPQELLESAQSKVSAQPPITRPSVTVSSELVERTVGVSANLQDSSI---SQQG 471
Query: 493 AVQL----SSNSLPLSEPF-------IHDQMPPNLRNTLSSTSCLDISSSMATSTHLEDS 541
A+ + +++ L L +PF MP +L+++S +S ++ L
Sbjct: 472 ALPINDGFTADKLQLHDPFDSIGGTKFSVTMPVCSSGSLTASSNTKGGASSCSTVLLAPD 531
Query: 542 RGDLS--CQPGLIGNVIQNYTSKQQWLEHKQGY-NQNLNNPFSNVNTLLSGNCTMGPFSQ 598
G Q G+ GN S+ E KQ + +Q L+ N N F
Sbjct: 532 TGRHPNYLQFGVAGN------SRHDMNEIKQDHLHQGLSTGGFNHN-----------FGA 574
Query: 599 SMDQSNSPYIAQLTGVEKAPLNT-----KLRSNDDFLLEQSKSHDGFIQNNYDPMDDMMS 653
M + +P ++ L K NT KL+ + + L K + GF ++ + D +++
Sbjct: 575 CMTEQPNPNVSYLMPQVKP--NTMASEDKLKQRNAYDLGIPKLNGGFSSSSCN-FDGLLN 631
Query: 654 GILKRDSNETILMDGELGFDAYSLSSCM 681
++K + ++ D +LG D + L +C+
Sbjct: 632 SMIKAEKDDLSFTDNDLGCDFFPLGACI 659
>gi|50400641|sp|Q9FGT7.2|ARR18_ARATH RecName: Full=Two-component response regulator ARR18
Length = 635
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 272/700 (38%), Positives = 375/700 (53%), Gaps = 111/700 (15%)
Query: 13 EDGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDL 72
EDG DKFP+GMRVLAVDD+PTCL+ LE L C+Y VT T ++ AL+MLREN N FDL
Sbjct: 7 EDGRHDKFPVGMRVLAVDDNPTCLRKLEELLLRCKYHVTKTMESRKALEMLRENSNMFDL 66
Query: 73 VISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEEL 132
VISDV MPD DGFKLLE +GLEMDLPVIMLSA+ D VMKGI HGACDYL+KPV ++EL
Sbjct: 67 VISDVEMPDTDGFKLLE-IGLEMDLPVIMLSAHSDYDSVMKGIIHGACDYLVKPVGLKEL 125
Query: 133 KNIWQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGD 192
+NIW HV+++ K KLL SD ++RKRKD+ D
Sbjct: 126 QNIWHHVVKKNI---KSYAKLL-----------------PPSESDSVPSASRKRKDKVND 165
Query: 193 E----------------DEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDK 236
++DGD G T+KKPRVVW+ ELH+KFV AV QLG+DK
Sbjct: 166 SGDEDDSDREEDDGEGSEQDGDGSG-------TRKKPRVVWSQELHQKFVSAVQQLGLDK 218
Query: 237 AVPKKILDLMNVEGLTRENVASHLQKFRLYLKRLSNETPQAGMVAALGSKDSSYLRIGAL 296
AVPKKILDLM++EGLTRENVASHLQK+RLYLK++ Q A G++DSSY ++ L
Sbjct: 219 AVPKKILDLMSIEGLTRENVASHLQKYRLYLKKIDEGQQQNMTPDAFGTRDSSYFQMAQL 278
Query: 297 DGFGDL---RSLNSPGRLSSSAISSSYVPGNMFGRFNSTSGLSMHGIASSGMIQPGHSQS 353
DG D R + S G LS S ++ P M+ S +++ G+ SS IQ GH Q+
Sbjct: 279 DGLRDFTAARQIPSSGLLSRSHLTKLQPP--MY------SSINLQGMNSSSFIQQGHHQN 330
Query: 354 FNTSFNTIGKIQQAMFPANRISNLFQGVRTSSELNQLPQSKSTTQIGDFNHINSPTTSMA 413
+ S N G + P + NLFQ RTSS L L +S + IGDF +
Sbjct: 331 SSNSANPFGTYHSTLSPRIQNVNLFQ--RTSSPLEPLQFPRSKSYIGDFKGLGD---RAI 385
Query: 414 ATGFTDATVAVGSSSSSVSTSSSNIMMLQGNLHQAHSRDAYGNQSSLSVASLNQESFDVG 473
F D + GSSS+S+ ++S+N +MLQ N Q + G Q + N S ++
Sbjct: 386 GGSFLDTCMPFGSSSTSLPSASTNPLMLQANYTQPLHIASDGIQPCIEGTPSNSASPNIS 445
Query: 474 VRNSSNFLDHSRCNESWQ---DAVQLSSNSLPLSEPFIHDQMPPNLRNTLSSTSCLDISS 530
+ S F H SWQ + + +SLPL+ F+ DQ+ T + + D +S
Sbjct: 446 FQGLSRFPGH-----SWQGNLNTTRFPPSSLPLNLAFLPDQV------TCAGNNLGDCTS 494
Query: 531 SMATSTHLEDSRGDLSCQPGLIGNVIQNYTS--KQQWLEHKQGYNQNLNNPFSNVNTLLS 588
++ E+ G++ C P L+G +QN Q+W +Q LNNPF N+ L
Sbjct: 495 LVSA----ENPGGEMQCDPQLLGGFMQNVNPLGGQKW---EQQNCTMLNNPFGNIEYPLP 547
Query: 589 GNCTM-----GPFSQSMDQS-------NSPYIAQLTGVEKAPLNTKLRSNDDFLLEQSKS 636
+ + S+ +D+S + Y+ + T + + + ND
Sbjct: 548 ADNMVFRDNNSTRSKGLDESLMNPIDNSQEYVGKATTMLDPEMKSGKPEND--------- 598
Query: 637 HDGFIQNNYDPMDDMMSGILKRDSNETIL-MDGELGFDAY 675
N +D DD+M+ ++K++ N ++ + GFD++
Sbjct: 599 ------NQHDVFDDIMNEMMKQEENNGMVPVATRFGFDSF 632
>gi|323388735|gb|ADX60172.1| ARR-B transcription factor [Zea mays]
Length = 631
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 256/572 (44%), Positives = 340/572 (59%), Gaps = 70/572 (12%)
Query: 15 GDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVI 74
G D+FP+GMRVLAVDDDPTCLK+LEN L CQY VT T QA TALK+LRE ++ FDLVI
Sbjct: 17 GAKDQFPVGMRVLAVDDDPTCLKILENLLLRCQYHVTTTGQAATALKLLREKKDQFDLVI 76
Query: 75 SDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKN 134
SDVHMPDMDGFKLLE VGLEMDLPVIMLSA G+T+ VMKGITHGACDYLLKPVRIE+L+
Sbjct: 77 SDVHMPDMDGFKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRIEQLRT 136
Query: 135 IWQHVIRRKKVGPK-------DQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRK 187
IWQHV+RR+ K D K L +V + EG G + ++N + +RK +
Sbjct: 137 IWQHVVRRRSCDAKNSGNDNDDSGKKL-----QVVSAEGDNGGV-----NRNKRISRKGR 186
Query: 188 DQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMN 247
D +GD+ +D DD+ +EN DS++QKKPRVVW+ ELHRKFV AVNQLG+DKAVPKKILDLMN
Sbjct: 187 DDNGDDGDDSDDNSNENGDSSSQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMN 246
Query: 248 VEGLTRENVASHLQKFRLYLKRLS-NETPQAGMVAALGSKDSSYLRIGALDGFGDLRSLN 306
VE +TRENVASHLQK+RLYLKRLS + + QA + AA G ++ +Y+ +G LD F R N
Sbjct: 247 VENITRENVASHLQKYRLYLKRLSADASRQANLTAAFGGRNPAYVNMG-LDAF---RQYN 302
Query: 307 SPGRLSSSAISSSYVPGNMFGRFNSTSGLSMHGIASSGMIQPGHSQ-SFNTSFNTIGK-- 363
+ GR ++ P N+ R NS + MHG+ S +Q GH+Q + +TS +G
Sbjct: 303 AYGRYRPVPTTNHSQPNNLLARMNSPA-FGMHGLLPSQPLQIGHNQNNLSTSLGNVGGMN 361
Query: 364 ----IQQA---------MFPANRISNLFQGVRTSSEL---NQLP----QSKSTTQIGDFN 403
I+ A FP N F + S++L N LP + + +G +
Sbjct: 362 NGNLIRGAHMPLQDTSKCFPTGPSGNSFANISNSTQLVTTNNLPLQSLEPSNQQHLGRLH 421
Query: 404 HINSPTTSMAATGFTDATVAVGSSSSSVSTSSSNIMMLQGNLHQAHSRDAYGNQSSLS-V 462
P S A + +++ + SSSN+ + +D N+ L +
Sbjct: 422 SSADPFNSFVGEPPQFADLGRCNTTWPTAVSSSNV-------QEIGQKDRIVNRPKLEPL 474
Query: 463 ASLNQESFDVGVRNSSNFLDHSRCNESWQDAVQLSSNSLPLSEPFIHDQMPPNLRNTLSS 522
+S + S + + S +S Q A L+SN LP+ PF + +P ++ +S
Sbjct: 475 SSFTEASSQIPLLGSE--------MQSHQVA-SLASNGLPM--PFTQEAVPFAYGSSTNS 523
Query: 523 TSCLD----ISSSMATSTHLEDSRGDLSCQPG 550
L+ +S+S ST L + R D S PG
Sbjct: 524 REMLNNNLALSNSGVNST-LPNLRIDGSVVPG 554
>gi|162460462|ref|NP_001104863.1| response regulator 9 [Zea mays]
gi|14189890|dbj|BAB55874.1| response regulator 9 [Zea mays]
Length = 631
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 208/353 (58%), Positives = 256/353 (72%), Gaps = 24/353 (6%)
Query: 15 GDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVI 74
G D+FP+GMRVLAVDDDPTCLK+LEN L CQY VT T QA TALK+LRE ++ FDLVI
Sbjct: 17 GAKDQFPVGMRVLAVDDDPTCLKILENLLLRCQYHVTTTGQAATALKLLREKKDQFDLVI 76
Query: 75 SDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKN 134
SDVHMPDMDGFKLLE VGLEMDLPVIMLSA G+T+ VMKGITHGACDYLLKPVRIE+L+
Sbjct: 77 SDVHMPDMDGFKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRIEQLRT 136
Query: 135 IWQHVIRRKKVGPK-------DQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRK 187
IWQHV+RR+ K D K L +V + EG G + ++N + +RK +
Sbjct: 137 IWQHVVRRRSCDAKNSGNDNDDSGKKL-----QVVSVEGDNGGV-----NRNKRISRKGR 186
Query: 188 DQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMN 247
D +GD+ +D DD+ +EN DS++QKKPRVVW+ ELHRKFV AVNQLG+DKAVPKKILDLMN
Sbjct: 187 DDNGDDGDDSDDNSNENGDSSSQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMN 246
Query: 248 VEGLTRENVASHLQKFRLYLKRLS-NETPQAGMVAALGSKDSSYLRIGALDGFGDLRSLN 306
VE +TRENVASHLQK+RLYLKRLS + + QA + AA G ++ +Y+ +G LD F R N
Sbjct: 247 VENITRENVASHLQKYRLYLKRLSADASRQANLTAAFGGRNPAYVNMG-LDAF---RQYN 302
Query: 307 SPGRLSSSAISSSYVPGNMFGRFNSTSGLSMHGIASSGMIQPGHSQ-SFNTSF 358
+ GR ++ P N+ R NS + MHG+ S +Q GH+Q + NTS
Sbjct: 303 AYGRYRPVPTTNHSQPNNLLARMNSPA-FGMHGLLPSQPLQIGHNQNNLNTSL 354
>gi|323388705|gb|ADX60157.1| ARR-B transcription factor [Zea mays]
Length = 631
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 205/346 (59%), Positives = 252/346 (72%), Gaps = 23/346 (6%)
Query: 15 GDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVI 74
G D+FP+GMRVLAVDDDPTCLK+LEN L CQY VT T QA TALK+LRE ++ FDLVI
Sbjct: 17 GAKDQFPVGMRVLAVDDDPTCLKILENLLLRCQYHVTTTGQAATALKLLREKKDQFDLVI 76
Query: 75 SDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKN 134
SDVHMPDMDGFKLLE VGLEMDLPVIMLSA G+T+ VMKGITHGACDYLLKPVRIE+L+
Sbjct: 77 SDVHMPDMDGFKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRIEQLRT 136
Query: 135 IWQHVIRRKKVGPK-------DQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRK 187
IWQHV+RR+ K D K L +V + EG G + ++N + +RK +
Sbjct: 137 IWQHVVRRRSCDAKNSGNDNDDSGKKL-----QVVSAEGDNGGV-----NRNKRISRKGR 186
Query: 188 DQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMN 247
D +GD+ +D DD+ +EN DS++QKKPRVVW+ ELHRKFV AVNQLG+DKAVPKKILDLMN
Sbjct: 187 DDNGDDGDDSDDNSNENGDSSSQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMN 246
Query: 248 VEGLTRENVASHLQKFRLYLKRLS-NETPQAGMVAALGSKDSSYLRIGALDGFGDLRSLN 306
VE +TRENVASHLQK+RLYLKRLS + + QA + AA G ++ +Y+ +G LD F R N
Sbjct: 247 VENITRENVASHLQKYRLYLKRLSADASRQANLTAAFGGRNPAYVNMG-LDAF---RQYN 302
Query: 307 SPGRLSSSAISSSYVPGNMFGRFNSTSGLSMHGIASSGMIQPGHSQ 352
+ GR ++ P N+ R NS + MHG+ S +Q GH+Q
Sbjct: 303 AYGRYRPVPTTNHSQPNNLLARMNSPA-FGMHGLLPSQPLQIGHNQ 347
>gi|242064244|ref|XP_002453411.1| hypothetical protein SORBIDRAFT_04g005580 [Sorghum bicolor]
gi|241933242|gb|EES06387.1| hypothetical protein SORBIDRAFT_04g005580 [Sorghum bicolor]
Length = 631
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 204/349 (58%), Positives = 250/349 (71%), Gaps = 21/349 (6%)
Query: 11 GCEDGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNF 70
G G D+FP+GMRVLAVDDDPTCLK+LE L+ CQY VT T QA TALK+LRE ++ F
Sbjct: 15 GGGHGAKDQFPVGMRVLAVDDDPTCLKLLEKLLQHCQYHVTTTGQAATALKLLREKKDQF 74
Query: 71 DLVISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIE 130
DLVISDVHMPDMDGFKLLE VGLEMDLPVIMLSA G+T+ VMKGITHGACDYLLKPVRIE
Sbjct: 75 DLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRIE 134
Query: 131 ELKNIWQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRK--- 187
+L+ IWQHV+RR+ K N N +G+ Q + G+ NG NR ++
Sbjct: 135 QLRTIWQHVVRRRSCDAK------NNGNDNDDSGKKLQVVSAEGD---NGGGNRNKRTSR 185
Query: 188 ---DQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILD 244
D +GD+ +D D++ +EN DS+TQKKPRVVW+ ELHRKFV AVNQLG+DKAVPKKILD
Sbjct: 186 RGRDDNGDDGDDSDENSNENGDSSTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILD 245
Query: 245 LMNVEGLTRENVASHLQKFRLYLKRLS-NETPQAGMVAALGSKDSSYLRIGALDGFGDLR 303
LMNVE +TRENVASHLQK+RLYLKRLS + + QA + AA G ++ +Y+ +G LD F R
Sbjct: 246 LMNVENITRENVASHLQKYRLYLKRLSADASRQANLTAAFGGRNPAYVNMG-LDAF---R 301
Query: 304 SLNSPGRLSSSAISSSYVPGNMFGRFNSTSGLSMHGIASSGMIQPGHSQ 352
N+ GR ++ P N+ R NS + MHG+ S +Q GH+Q
Sbjct: 302 QYNAYGRYRPVPTTNHSQPNNLLARMNSPA-FGMHGLLPSQPLQIGHTQ 349
>gi|413939317|gb|AFW73868.1| putative two-component response regulator family protein [Zea mays]
Length = 676
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 219/414 (52%), Positives = 269/414 (64%), Gaps = 22/414 (5%)
Query: 1 MTAEERMGSAGCEDGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTAL 60
M EER + G D+FP+GMRVLAVDDDP CLKVLEN LR CQY VT TNQAV AL
Sbjct: 1 MRPEERDAAVGRVR---DQFPVGMRVLAVDDDPVCLKVLENLLRRCQYHVTTTNQAVVAL 57
Query: 61 KMLRENRNNFDLVISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGAC 120
MLR+NR+ FDLVISDVHMPDMDGFKLLE VGLEMDLPVIMLS G+TK VMKGITHGAC
Sbjct: 58 SMLRQNRDLFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSVNGETKTVMKGITHGAC 117
Query: 121 DYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRVGAGEG--GQGAMSTGNSDQ 178
DYLLKPVR+EEL+NIWQHV+RRK N +E +R + ++ G DQ
Sbjct: 118 DYLLKPVRLEELRNIWQHVVRRKFSNCDRANNDGYEECNRPSNADFDLAHSQITAGPPDQ 177
Query: 179 NGKSNRKRKD-QDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKA 237
+G+ ++KRK+ +EDE + +G +N+D + KKPRVVW+ ELHRKFV AVNQLG+DKA
Sbjct: 178 SGRPSKKRKEYHSEEEDEGEESNGQDNDDPSAPKKPRVVWSVELHRKFVAAVNQLGIDKA 237
Query: 238 VPKKILDLMNVEGLTRENVASHLQKFRLYLKRLSN-ETPQAGMVAALGSKDSSYLRIGAL 296
VPK+IL+LMNVE LTRENVASHLQK+RLYLKRLS + QA +VAALG D ++R+ A
Sbjct: 238 VPKRILELMNVERLTRENVASHLQKYRLYLKRLSAVASQQASIVAALGGND-PFMRMSAF 296
Query: 297 DGFGDLRSLNSPGRLSSSAISSSYVPGNMFGRFNSTSGLSMHGIASSGMIQPGHSQSFNT 356
+G +S SSA S+ P + R N S ++ G+++S IQ + T
Sbjct: 297 EGLHGYQS------FVSSAALPSFSPQGLLNRNNPAS-FAIQGVSASRPIQIATGNT--T 347
Query: 357 SFNTIGKIQQAM---FPANRI--SNLFQGVRTSSELNQLPQSKSTTQIGDFNHI 405
++IG P NL QG+ T QLPQ + D + I
Sbjct: 348 MSHSIGDPNDKYHLSLPGTSCLQGNLAQGLPTPVGQVQLPQKWIHEETDDLSTI 401
>gi|9759533|dbj|BAB10999.1| unnamed protein product [Arabidopsis thaliana]
Length = 632
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 269/700 (38%), Positives = 371/700 (53%), Gaps = 114/700 (16%)
Query: 13 EDGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDL 72
EDG DKFP+GMRVLAVDD+PTCL+ LE L C+Y VT T ++ AL+MLREN N FDL
Sbjct: 7 EDGRHDKFPVGMRVLAVDDNPTCLRKLEELLLRCKYHVTKTMESRKALEMLRENSNMFDL 66
Query: 73 VISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEEL 132
VISDV MPD DGFKLLE +GLEMDLPVI S Y VMKGI HGACDYL+KPV ++EL
Sbjct: 67 VISDVEMPDTDGFKLLE-IGLEMDLPVITHSDYDS---VMKGIIHGACDYLVKPVGLKEL 122
Query: 133 KNIWQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGD 192
+NIW HV+++ K KLL SD ++RKRKD+ D
Sbjct: 123 QNIWHHVVKKNI---KSYAKLL-----------------PPSESDSVPSASRKRKDKVND 162
Query: 193 E----------------DEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDK 236
++DGD G T+KKPRVVW+ ELH+KFV AV QLG+DK
Sbjct: 163 SGDEDDSDREEDDGEGSEQDGDGSG-------TRKKPRVVWSQELHQKFVSAVQQLGLDK 215
Query: 237 AVPKKILDLMNVEGLTRENVASHLQKFRLYLKRLSNETPQAGMVAALGSKDSSYLRIGAL 296
AVPKKILDLM++EGLTRENVASHLQK+RLYLK++ Q A G++DSSY ++ L
Sbjct: 216 AVPKKILDLMSIEGLTRENVASHLQKYRLYLKKIDEGQQQNMTPDAFGTRDSSYFQMAQL 275
Query: 297 DGFGDL---RSLNSPGRLSSSAISSSYVPGNMFGRFNSTSGLSMHGIASSGMIQPGHSQS 353
DG D R + S G LS S ++ P M+ S +++ G+ SS IQ GH Q+
Sbjct: 276 DGLRDFTAARQIPSSGLLSRSHLTKLQPP--MY------SSINLQGMNSSSFIQQGHHQN 327
Query: 354 FNTSFNTIGKIQQAMFPANRISNLFQGVRTSSELNQLPQSKSTTQIGDFNHINSPTTSMA 413
+ S N G + P + NLFQ RTSS L L +S + IGDF +
Sbjct: 328 SSNSANPFGTYHSTLSPRIQNVNLFQ--RTSSPLEPLQFPRSKSYIGDFKGLGD---RAI 382
Query: 414 ATGFTDATVAVGSSSSSVSTSSSNIMMLQGNLHQAHSRDAYGNQSSLSVASLNQESFDVG 473
F D + GSSS+S+ ++S+N +MLQ N Q + G Q + N S ++
Sbjct: 383 GGSFLDTCMPFGSSSTSLPSASTNPLMLQANYTQPLHIASDGIQPCIEGTPSNSASPNIS 442
Query: 474 VRNSSNFLDHSRCNESWQ---DAVQLSSNSLPLSEPFIHDQMPPNLRNTLSSTSCLDISS 530
+ S F H SWQ + + +SLPL+ F+ DQ+ T + + D +S
Sbjct: 443 FQGLSRFPGH-----SWQGNLNTTRFPPSSLPLNLAFLPDQV------TCAGNNLGDCTS 491
Query: 531 SMATSTHLEDSRGDLSCQPGLIGNVIQNYTS--KQQWLEHKQGYNQNLNNPFSNVNTLLS 588
++ E+ G++ C P L+G +QN Q+W +Q LNNPF N+ L
Sbjct: 492 LVSA----ENPGGEMQCDPQLLGGFMQNVNPLGGQKW---EQQNCTMLNNPFGNIEYPLP 544
Query: 589 GNCTM-----GPFSQSMDQS-------NSPYIAQLTGVEKAPLNTKLRSNDDFLLEQSKS 636
+ + S+ +D+S + Y+ + T + + + ND
Sbjct: 545 ADNMVFRDNNSTRSKGLDESLMNPIDNSQEYVGKATTMLDPEMKSGKPEND--------- 595
Query: 637 HDGFIQNNYDPMDDMMSGILKRDSNETIL-MDGELGFDAY 675
N +D DD+M+ ++K++ N ++ + GFD++
Sbjct: 596 ------NQHDVFDDIMNEMMKQEENNGMVPVATRFGFDSF 629
>gi|240254528|ref|NP_180090.6| response regulator 12 [Arabidopsis thaliana]
gi|378405150|sp|P62598.2|ARR12_ARATH RecName: Full=Two-component response regulator ARR12
gi|330252573|gb|AEC07667.1| response regulator 12 [Arabidopsis thaliana]
Length = 596
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 226/451 (50%), Positives = 290/451 (64%), Gaps = 43/451 (9%)
Query: 1 MTAEERMGSAGCEDGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTAL 60
MT E+ + + +D+FP+GMRVLAVDDD TCLK+LE+ LR CQY VT TNQA AL
Sbjct: 1 MTVEQNLEA-------LDQFPVGMRVLAVDDDQTCLKILESLLRHCQYHVTTTNQAQKAL 53
Query: 61 KMLRENRNNFDLVISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGAC 120
++LREN+N FDLVISDV MPDMDGFKLLE VGLEMDLPVIMLSA+ D K VMKG+THGAC
Sbjct: 54 ELLRENKNKFDLVISDVDMPDMDGFKLLELVGLEMDLPVIMLSAHSDPKYVMKGVTHGAC 113
Query: 121 DYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQ-N 179
DYLLKPVRIEELKNIWQHV+R + D+N+ N G G G GNSDQ N
Sbjct: 114 DYLLKPVRIEELKNIWQHVVRSR----FDKNRGSNNN----GDKRDGSGNEGVGNSDQNN 165
Query: 180 GKSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVP 239
GK NRKRKDQ +ED D+D +N+DS QKK RVVWT ELH+KFV AVNQLG +KA+P
Sbjct: 166 GKGNRKRKDQ---YNEDEDEDRDDNDDSCAQKKQRVVWTVELHKKFVAAVNQLGYEKAMP 222
Query: 240 KKILDLMNVEGLTRENVASHLQKFRLYLKRLSNETPQAGMVAALGSKDSSYLRIGALDGF 299
KKILDLMNVE LTRENVASHLQKFRLYLKR+S Q ++A + + ++++ LDGF
Sbjct: 223 KKILDLMNVEKLTRENVASHLQKFRLYLKRISGVANQQAIMA---NSELHFMQMNGLDGF 279
Query: 300 GDLRSLNSPGRLSSSAIS-SSYVPGNMFGRFNSTSGLSMHGIAS--SGMIQPGHSQSFNT 356
G+ A + S+ P + GR N+ SG+ + ++S +GM F
Sbjct: 280 HHRPIPVGSGQYHGGAPAMRSFPPNGILGRLNTPSGIGVRSLSSPPAGM--------FLQ 331
Query: 357 SFNTIGKIQQ-AMFPANRI--SNLFQGVRTSSELNQLPQSKSTTQIGDFNHINSPTTSMA 413
+ IGK + P N N+ QG+ E +QL + + ++ + N + TSMA
Sbjct: 332 NQTDIGKFHHVSSLPLNHSDGGNILQGLPMPLEFDQLQTNNNKSRNMNSNK-SIAGTSMA 390
Query: 414 ATGFTDATVAVGSSSSSVSTSSSNIMMLQGN 444
F+ +S +S ++N+++L+G+
Sbjct: 391 FPSFST------QQNSLISAPNNNVVVLEGH 415
>gi|25365080|pir||C84645 hypothetical protein At2g25180 [imported] - Arabidopsis thaliana
Length = 573
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 226/451 (50%), Positives = 290/451 (64%), Gaps = 43/451 (9%)
Query: 1 MTAEERMGSAGCEDGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTAL 60
MT E+ + + +D+FP+GMRVLAVDDD TCLK+LE+ LR CQY VT TNQA AL
Sbjct: 1 MTVEQNLEA-------LDQFPVGMRVLAVDDDQTCLKILESLLRHCQYHVTTTNQAQKAL 53
Query: 61 KMLRENRNNFDLVISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGAC 120
++LREN+N FDLVISDV MPDMDGFKLLE VGLEMDLPVIMLSA+ D K VMKG+THGAC
Sbjct: 54 ELLRENKNKFDLVISDVDMPDMDGFKLLELVGLEMDLPVIMLSAHSDPKYVMKGVTHGAC 113
Query: 121 DYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSD-QN 179
DYLLKPVRIEELKNIWQHV+R + D+N+ N G G G GNSD N
Sbjct: 114 DYLLKPVRIEELKNIWQHVVRSR----FDKNRGSNNN----GDKRDGSGNEGVGNSDPNN 165
Query: 180 GKSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVP 239
GK NRKRKDQ +ED D+D +N+DS QKK RVVWT ELH+KFV AVNQLG +KA+P
Sbjct: 166 GKGNRKRKDQ---YNEDEDEDRDDNDDSCAQKKQRVVWTVELHKKFVAAVNQLGYEKAMP 222
Query: 240 KKILDLMNVEGLTRENVASHLQKFRLYLKRLSNETPQAGMVAALGSKDSSYLRIGALDGF 299
KKILDLMNVE LTRENVASHLQKFRLYLKR+S Q ++A + + ++++ LDGF
Sbjct: 223 KKILDLMNVEKLTRENVASHLQKFRLYLKRISGVANQQAIMA---NSELHFMQMNGLDGF 279
Query: 300 GDLRSLNSPGRLSSSAIS-SSYVPGNMFGRFNSTSGLSMHGIAS--SGMIQPGHSQSFNT 356
G+ A + S+ P + GR NS+SG+ + ++S +GM F
Sbjct: 280 HHRPIPVGSGQYHGGAPAMRSFPPNGILGRLNSSSGIGVRSLSSPPAGM--------FLQ 331
Query: 357 SFNTIGKIQQ-AMFPANRI--SNLFQGVRTSSELNQLPQSKSTTQIGDFNHINSPTTSMA 413
+ IGK + P N N+ QG+ E +QL + + ++ + N + TSMA
Sbjct: 332 NQTDIGKFHHVSSLPLNHSDGGNILQGLPMPLEFDQLQTNNNKSRNMNSNK-SIAGTSMA 390
Query: 414 ATGFTDATVAVGSSSSSVSTSSSNIMMLQGN 444
F+ +S +S ++N+++L+G+
Sbjct: 391 FPSFST------QQNSLISAPNNNVVVLEGH 415
>gi|145359387|ref|NP_200616.3| response regulator 18 [Arabidopsis thaliana]
gi|332009612|gb|AED96995.1| response regulator 18 [Arabidopsis thaliana]
Length = 618
Score = 365 bits (937), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 264/689 (38%), Positives = 366/689 (53%), Gaps = 111/689 (16%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
MRVLAVDD+PTCL+ LE L C+Y VT T ++ AL+MLREN N FDLVISDV MPD D
Sbjct: 1 MRVLAVDDNPTCLRKLEELLLRCKYHVTKTMESRKALEMLRENSNMFDLVISDVEMPDTD 60
Query: 84 GFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRK 143
GFKLLE +GLEMDLPVIMLSA+ D VMKGI HGACDYL+KPV ++EL+NIW HV+++
Sbjct: 61 GFKLLE-IGLEMDLPVIMLSAHSDYDSVMKGIIHGACDYLVKPVGLKELQNIWHHVVKKN 119
Query: 144 KVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDE---------- 193
K KLL SD ++RKRKD+ D
Sbjct: 120 I---KSYAKLL-----------------PPSESDSVPSASRKRKDKVNDSGDEDDSDREE 159
Query: 194 ------DEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMN 247
++DGD G T+KKPRVVW+ ELH+KFV AV QLG+DKAVPKKILDLM+
Sbjct: 160 DDGEGSEQDGDGSG-------TRKKPRVVWSQELHQKFVSAVQQLGLDKAVPKKILDLMS 212
Query: 248 VEGLTRENVASHLQKFRLYLKRLSNETPQAGMVAALGSKDSSYLRIGALDGFGDL---RS 304
+EGLTRENVASHLQK+RLYLK++ Q A G++DSSY ++ LDG D R
Sbjct: 213 IEGLTRENVASHLQKYRLYLKKIDEGQQQNMTPDAFGTRDSSYFQMAQLDGLRDFTAARQ 272
Query: 305 LNSPGRLSSSAISSSYVPGNMFGRFNSTSGLSMHGIASSGMIQPGHSQSFNTSFNTIGKI 364
+ S G LS S ++ P M+ S +++ G+ SS IQ GH Q+ + S N G
Sbjct: 273 IPSSGLLSRSHLTKLQPP--MY------SSINLQGMNSSSFIQQGHHQNSSNSANPFGTY 324
Query: 365 QQAMFPANRISNLFQGVRTSSELNQLPQSKSTTQIGDFNHINSPTTSMAATGFTDATVAV 424
+ P + NLFQ RTSS L L +S + IGDF + F D +
Sbjct: 325 HSTLSPRIQNVNLFQ--RTSSPLEPLQFPRSKSYIGDFKGLGD---RAIGGSFLDTCMPF 379
Query: 425 GSSSSSVSTSSSNIMMLQGNLHQAHSRDAYGNQSSLSVASLNQESFDVGVRNSSNFLDHS 484
GSSS+S+ ++S+N +MLQ N Q + G Q + N S ++ + S F H
Sbjct: 380 GSSSTSLPSASTNPLMLQANYTQPLHIASDGIQPCIEGTPSNSASPNISFQGLSRFPGH- 438
Query: 485 RCNESWQ---DAVQLSSNSLPLSEPFIHDQMPPNLRNTLSSTSCLDISSSMATSTHLEDS 541
SWQ + + +SLPL+ F+ DQ+ T + + D +S ++ E+
Sbjct: 439 ----SWQGNLNTTRFPPSSLPLNLAFLPDQV------TCAGNNLGDCTSLVSA----ENP 484
Query: 542 RGDLSCQPGLIGNVIQNYTS--KQQWLEHKQGYNQNLNNPFSNVNTLLSGNCTM-----G 594
G++ C P L+G +QN Q+W +Q LNNPF N+ L + +
Sbjct: 485 GGEMQCDPQLLGGFMQNVNPLGGQKW---EQQNCTMLNNPFGNIEYPLPADNMVFRDNNS 541
Query: 595 PFSQSMDQS-------NSPYIAQLTGVEKAPLNTKLRSNDDFLLEQSKSHDGFIQNNYDP 647
S+ +D+S + Y+ + T + + + ND N +D
Sbjct: 542 TRSKGLDESLMNPIDNSQEYVGKATTMLDPEMKSGKPEND---------------NQHDV 586
Query: 648 MDDMMSGILKRDSNETIL-MDGELGFDAY 675
DD+M+ ++K++ N ++ + GFD++
Sbjct: 587 FDDIMNEMMKQEENNGMVPVATRFGFDSF 615
>gi|357125033|ref|XP_003564200.1| PREDICTED: two-component response regulator ARR12-like
[Brachypodium distachyon]
Length = 654
Score = 365 bits (936), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 214/418 (51%), Positives = 276/418 (66%), Gaps = 28/418 (6%)
Query: 1 MTAEERMGSAGCEDGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTAL 60
M E R G E +D+FP+GMRVLAVDDDP CLKVLE LR CQY VT TNQA+TAL
Sbjct: 6 MMMEARKGLIARE---MDQFPVGMRVLAVDDDPVCLKVLETLLRRCQYHVTATNQAITAL 62
Query: 61 KMLRENRNNFDLVISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGAC 120
K+LREN++ FDLVISDVHMPDMDGFKLLE VGLEMDLPVIMLS G+TK V+KGITHGAC
Sbjct: 63 KLLRENKDMFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSVNGETKTVLKGITHGAC 122
Query: 121 DYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQG--AMSTGNSDQ 178
DYLLKPVRIEEL+N+WQHV+RRK + N +E S+ + + G ++ G+SDQ
Sbjct: 123 DYLLKPVRIEELRNVWQHVVRRKFSNREPSNLDFCKEFSKPPSADSYHGLNQVTCGSSDQ 182
Query: 179 NGKSNRKRKD-QDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKA 237
+ ++ +KRK+ +EDE D+D EN++ + K+PRVVW+ ELHRKFV AVN LG+DKA
Sbjct: 183 SSRACKKRKELHSEEEDEGEDNDAQENDEPSASKRPRVVWSVELHRKFVAAVNHLGIDKA 242
Query: 238 VPKKILDLMNVEGLTRENVASHLQKFRLYLKRLSN-ETPQAGMVAALGSKDSSYLRIGAL 296
VPK+IL+LMNVE LTRENVASHLQK+RLYL+RLS + QA + AA G +D +L +GA
Sbjct: 243 VPKRILELMNVEKLTRENVASHLQKYRLYLRRLSAVASQQASIAAAFGGRD-PFLHMGAF 301
Query: 297 DGFGDLRSLNSPGRLSSSAISSSYVPGNMFGRFNSTSGLSMHGIASSGMIQ-------PG 349
+G L+S + S SS+ P + +T+ + +A S IQ G
Sbjct: 302 EG------LHSYQTFAPSVALSSFNPHGLLSGAGATA-FGLQELAPSKAIQCATSNGAVG 354
Query: 350 HSQSFNTSFNTIGKIQQAMFPANRISNLFQGVRTSSELNQLPQSKSTTQIGDFNHINS 407
H F+ + +Q+ N+ ++L QG+ TS L QL Q + D + + S
Sbjct: 355 HCAGDTNKFHIV-SLQE-----NQPASLTQGLTTSLGLPQLQQKWIHQETNDLSSVFS 406
>gi|312283507|dbj|BAJ34619.1| unnamed protein product [Thellungiella halophila]
Length = 539
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 196/330 (59%), Positives = 236/330 (71%), Gaps = 27/330 (8%)
Query: 16 DIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVIS 75
D+D+FP+GMRVLAVDDD TCL++LE L CQY VT T+QA TALK+LREN+N FDLVIS
Sbjct: 6 DLDQFPVGMRVLAVDDDQTCLRILETLLHRCQYHVTTTDQAQTALKLLRENKNKFDLVIS 65
Query: 76 DVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNI 135
DV MPDMDGFKLLE VGLEMDLPVIMLSA+ D K VMKG+ HGACDYLLKPVRIEELKNI
Sbjct: 66 DVDMPDMDGFKLLELVGLEMDLPVIMLSAHSDPKYVMKGVKHGACDYLLKPVRIEELKNI 125
Query: 136 WQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNG-KSNRKRKDQDGDED 194
WQHV+R+ K + S + GE S GNSDQNG K+NRKRKDQ +E+
Sbjct: 126 WQHVVRKGK---------FKKMKSSLSNGE------SEGNSDQNGVKANRKRKDQ-FEEE 169
Query: 195 EDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRE 254
E+ ++ G EN+D T QKKPRV+WT ELH K + AV+ LGV+KAVPKKILDLMNVE LTRE
Sbjct: 170 EEDEERGIENDDPTAQKKPRVLWTRELHNKSLAAVDHLGVEKAVPKKILDLMNVEKLTRE 229
Query: 255 NVASHLQKFRLYLKRLSNETPQAGMVAALGSKDSSYLRIGALDGFGDLRSLNSP-----G 309
NVASHLQKFR LK+++NET Q +AA+ DS ++++ +L G G + P G
Sbjct: 230 NVASHLQKFRSALKKITNETNQQANMAAM---DSHFMQMSSLKGLGGFHH-HRPIPLGSG 285
Query: 310 RLSSSAISSSYVPGN-MFGRFNSTSGLSMH 338
+ A + P N GR NS +G+ H
Sbjct: 286 QFHGGAATMRQYPSNRTLGRLNSLAGMFPH 315
>gi|297825553|ref|XP_002880659.1| hypothetical protein ARALYDRAFT_481375 [Arabidopsis lyrata subsp.
lyrata]
gi|297326498|gb|EFH56918.1| hypothetical protein ARALYDRAFT_481375 [Arabidopsis lyrata subsp.
lyrata]
Length = 611
Score = 361 bits (927), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 269/691 (38%), Positives = 377/691 (54%), Gaps = 115/691 (16%)
Query: 17 IDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISD 76
+D+FP+GMRVLAVDDD TCLK+LE LR CQY VT TN+A AL++LREN+N FDLVISD
Sbjct: 10 LDQFPVGMRVLAVDDDQTCLKILETLLRHCQYHVTTTNEAQKALELLRENKNKFDLVISD 69
Query: 77 VHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIW 136
V MPDMDGFKLLE VGLEMDLPVIMLSA+ D K VMKG+THGACDYLLKPVRIEELKNIW
Sbjct: 70 VDMPDMDGFKLLELVGLEMDLPVIMLSAHSDPKFVMKGVTHGACDYLLKPVRIEELKNIW 129
Query: 137 QHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQ-NGKSNRKRKDQDGDEDE 195
QHV+R + D+N+ N + R G+G G G SDQ NG++NRKRKDQ +E
Sbjct: 130 QHVVRSR----FDKNRGSNNGDKRDGSGNEG-----VGYSDQNNGRANRKRKDQ---YNE 177
Query: 196 DGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTREN 255
D D++ +N+DS+ QKK RVVWT ELH+KFV AVNQLG +KA+PKKILDLMNVE LTREN
Sbjct: 178 DDDEEKDDNDDSSAQKKQRVVWTVELHKKFVAAVNQLGYEKAMPKKILDLMNVEKLTREN 237
Query: 256 VASHLQKFRLYLKRLSNETPQAGMVAALGSKDSSYLRIGA----LDGFGDLRSLNSPGRL 311
VASHLQKFRLYLKR+S Q ++A + D +L++ + LDGF G+
Sbjct: 238 VASHLQKFRLYLKRISGVANQQAIMA---NSDLHFLQMSSSLNGLDGFNHRPIPVGSGQF 294
Query: 312 SSSAIS-SSYVPGNMFGRFNSTSGLSMHGIAS--SGMIQPGHSQSFNTSFNTIGKIQQ-A 367
A + S+ P + GR N+ SG+ + ++S +GM F + +GK +
Sbjct: 295 HGGAPAMRSFTPNEILGRLNTPSGIGVRNLSSPPAGM--------FLQNQTDLGKFHHVS 346
Query: 368 MFPANRI--SNLFQGVRTSSELNQLPQSKSTTQIGDFNHINSPT---TSMAATGFTDATV 422
P N N+ G+ E +QL + + N N+ + TSMA F+
Sbjct: 347 SLPLNHSDGGNILPGLPLPLEFDQLQTNNNNNNNNIRNMNNNKSIAGTSMAFPSFST--- 403
Query: 423 AVGSSSSSVSTSSSNIMMLQGNLHQAHSRDAY-GNQSSLSVA----SLNQESFDVGVRNS 477
+S + ++N+++L+G H S + G+Q + + +++ + +NS
Sbjct: 404 ---QQNSIIGAPNNNLVVLEG--HPQSSPPGFPGHQINKRLEHWSNAVSSSTLPPPAQNS 458
Query: 478 SNF---LDHSRCNESWQDAVQLSSNSLPLSEPFIHDQM---PPNLRNTLSSTSCLDISSS 531
++ D S +S D ++ ++ S S PF PP L T C ++
Sbjct: 459 NSINRQFDVSPLPQSRPDTLEWNNVSSSYSIPFCDSATTLSPPALDTTNPRAFCRNMDFD 518
Query: 532 MATSTHLEDSRGDLSCQPGLIGNVIQNYTSKQQWLEHKQGYNQNLNNPFSNVNTLLSGNC 591
+T + QPG + +Q T SGN
Sbjct: 519 SST-----------NAQPGCFYDTLQ---------------------------TRQSGN- 539
Query: 592 TMGPFSQSMDQSNSPYIAQLTGVEKAPLNTKLRSNDDFLLEQSKSHDGFIQNNYDPMDDM 651
GP + +M S++P + G + KL+S GF+ +DD+
Sbjct: 540 -YGPTTDAMLSSSNPKEGFVVGQQ------KLQSG------------GFMSAEAGSLDDI 580
Query: 652 MSGILKRDSNETILMDGELGFDAY-SLSSCM 681
++ +K++ ++ L G+LG+ + SL +C+
Sbjct: 581 VNSTMKQEQSQGDLSGGDLGYGGFSSLRTCI 611
>gi|297798770|ref|XP_002867269.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297313105|gb|EFH43528.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 550
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 195/354 (55%), Positives = 232/354 (65%), Gaps = 34/354 (9%)
Query: 17 IDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISD 76
+D+FP+GMRVLAVDDD TCL++L+ L CQY VT TNQA TAL++LREN+N FDLVISD
Sbjct: 10 LDQFPVGMRVLAVDDDQTCLRILQTLLHRCQYHVTTTNQAQTALELLRENKNKFDLVISD 69
Query: 77 VHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIW 136
V MPDMDGFKLLE VGLEMDLPVIMLSA+ D K VMKG+ HGACDYLLKPVRIEELKNIW
Sbjct: 70 VDMPDMDGFKLLELVGLEMDLPVIMLSAHSDPKYVMKGVKHGACDYLLKPVRIEELKNIW 129
Query: 137 QHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDED 196
QHV+R+ K + GA NSD K+NRKRK+Q +E+E+
Sbjct: 130 QHVVRKSK--------------LKKNKSSVSNGA---ANSD---KANRKRKEQYEEEEEE 169
Query: 197 GDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENV 256
G+EN+D T QKKPRV+WT ELH KF+ AV+ LGV+KAVPKKILDLMNV+ LTRENV
Sbjct: 170 E--RGNENDDPTAQKKPRVLWTHELHNKFLAAVDHLGVEKAVPKKILDLMNVDKLTRENV 227
Query: 257 ASHLQKFRLYLKRLSNETPQAGMVAALGSKDSSYLRIGALDGFGDLRSLN-SPGRLSSSA 315
ASHLQKFR+ LK++S++ Q AAL S L GF R + G+ A
Sbjct: 228 ASHLQKFRVALKKMSDKANQQATRAALESHLMQMSSHKGLGGFYHHRGIPVGTGQFHGGA 287
Query: 316 ISSSYVPGNM-FGRFNSTSGLSMHGIASSGMIQPGHSQSFNTSFNTIGKIQQAM 368
+ P N GR NS +G GM QP S SF + N G I Q +
Sbjct: 288 TMMRHYPSNRNLGRLNSLAG---------GMFQPV-SSSFPRNHNDGGNILQGL 331
>gi|449432892|ref|XP_004134232.1| PREDICTED: two-component response regulator ARR2-like [Cucumis
sativus]
gi|449503838|ref|XP_004162202.1| PREDICTED: two-component response regulator ARR2-like [Cucumis
sativus]
Length = 660
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 182/387 (47%), Positives = 249/387 (64%), Gaps = 30/387 (7%)
Query: 18 DKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDV 77
D+FP G+RVL VDDDPTCL +LE LR C+Y+VT ++A AL +LR+N+N FD+V+SDV
Sbjct: 18 DQFPAGLRVLVVDDDPTCLMILEKMLRICRYDVTNCSRAEDALSLLRQNKNGFDIVLSDV 77
Query: 78 HMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQ 137
HMPDMDGFKLLE++GLEMDLPVIM+S +VMKG+THGACDYL+KPVR+E LKNIWQ
Sbjct: 78 HMPDMDGFKLLEYIGLEMDLPVIMMSVDDGKNVVMKGVTHGACDYLIKPVRMEALKNIWQ 137
Query: 138 HVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDG 197
HV+R++K KD + + R + + A + ++++ N KR+ D ++ E
Sbjct: 138 HVVRKRKNEWKDLEQTCVDDVDR--QQKTNEDADYSSSANEGSWRNSKRRKDDVEDPE-- 193
Query: 198 DDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVA 257
E +DS+T KKPRVVW+ ELH++FV AVNQLG+DKAVPKKIL+LMNV GLTRENVA
Sbjct: 194 -----ERDDSSTLKKPRVVWSVELHQQFVAAVNQLGIDKAVPKKILELMNVPGLTRENVA 248
Query: 258 SHLQKFRLYLKRLSNETPQAGMVAALGSKDSSYLRIGALDGFG------DLRSLNSPGRL 311
SHLQK+RLYL+RLS G+ + +++++ A D FG DL++L + G+L
Sbjct: 249 SHLQKYRLYLRRLS------GITQHQSNLNNTFM--SAQDAFGPPLNGLDLQTLAAAGQL 300
Query: 312 SSSAISSSYVPGNMFGRFNSTSGLSMHGIASSGMIQPGHSQSFNTSFNTIGKIQQAMFPA 371
++++ G FGR + SG+ M + Q H SF G QQ
Sbjct: 301 QPQSLATLQAAG--FGRSTAKSGMPMPLVD-----QRNHIFSFENPKLRFGDGQQPHLNG 353
Query: 372 NRISNLFQGVRTSSELNQLPQSKSTTQ 398
++ NL G+ T+ E QL + + Q
Sbjct: 354 SKPMNLLHGIPTTMEPKQLANLQHSAQ 380
>gi|449464732|ref|XP_004150083.1| PREDICTED: two-component response regulator ARR2-like [Cucumis
sativus]
gi|449501499|ref|XP_004161384.1| PREDICTED: two-component response regulator ARR2-like [Cucumis
sativus]
Length = 673
Score = 334 bits (857), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 184/378 (48%), Positives = 243/378 (64%), Gaps = 26/378 (6%)
Query: 18 DKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDV 77
D+FP G+RVL VDDDPTCLK+LE L+ C Y VT N+A AL MLREN+N FD+V+SDV
Sbjct: 31 DQFPAGLRVLVVDDDPTCLKILEKMLQNCCYAVTKCNRAEIALSMLRENKNGFDIVLSDV 90
Query: 78 HMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQ 137
HMPDMDGFKLLE VGLEMDLPVIM+SA +VMKG+ HGACDYL+KPVRIE L+N+WQ
Sbjct: 91 HMPDMDGFKLLEQVGLEMDLPVIMMSADDGKNVVMKGVIHGACDYLIKPVRIEALRNLWQ 150
Query: 138 HVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGN---SDQNGKSNRKRKDQDGDED 194
HV+R++K KD L Q S V G+ Q N S G N ++ +D +E+
Sbjct: 151 HVVRKRKTEWKD----LEQSGS-VDEGDREQNLSEGANYSSSAYEGSWNSSKRRRDAEEE 205
Query: 195 EDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRE 254
+ E +D++T KKPRVVW+ ELH++FV AVNQLG+DKAVPKKIL+LMNV GLTRE
Sbjct: 206 PE------ERDDTSTLKKPRVVWSVELHQQFVAAVNQLGIDKAVPKKILELMNVPGLTRE 259
Query: 255 NVASHLQKFRLYLKRLSNETPQAGMV--AALGSKDSSYLRIGALDGFGDLRSLNSPGRLS 312
NVASHLQK+RLYL+RLS +P + + + +D + +G+ +G DL++L+ G+LS
Sbjct: 260 NVASHLQKYRLYLRRLSGVSPHQSNLNNSFINPQDPPFGSMGSFNGI-DLQTLSVTGQLS 318
Query: 313 SSAISSSYVPGNMFGRFNSTSGLSMHGIASSGMIQPGHSQSFNTSFNTIGKIQQAMFPAN 372
++++ G R + SG+SM + + SF + Q +
Sbjct: 319 PQSLAALQATG--LRRPTAKSGISM-------ALDQNNIFSFENPKLRFVEDQTQHLNNS 369
Query: 373 RISNLFQGVRTSSELNQL 390
+ NLF G+ T E QL
Sbjct: 370 KPVNLFHGIPTKMEPKQL 387
>gi|356521815|ref|XP_003529546.1| PREDICTED: two-component response regulator ARR2-like [Glycine max]
Length = 679
Score = 334 bits (856), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 188/401 (46%), Positives = 260/401 (64%), Gaps = 21/401 (5%)
Query: 14 DGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLV 73
D D+FP G+RVL VDDDPTCL +LE LR C YEVT N+A TAL +LREN+N FD+V
Sbjct: 23 DAVSDQFPAGLRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAETALSLLRENKNGFDIV 82
Query: 74 ISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELK 133
ISDVHMPDMDGFKLLEH+GLEMDLPVIM+SA +VMKG+THGACDYL+KPVRIE LK
Sbjct: 83 ISDVHMPDMDGFKLLEHIGLEMDLPVIMMSADDGKSVVMKGVTHGACDYLIKPVRIEALK 142
Query: 134 NIWQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDE 193
NIWQHV+R++K N+ + E S A EG + ++ +D + +N ++ +
Sbjct: 143 NIWQHVVRKRK------NEWKDAEQSG-SAEEGDRQPKASDEADYSSSANEGSW-RNSKK 194
Query: 194 DEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTR 253
D +++ + +D++T KKPRVVW+ ELH++FV AV+QLG+DKAVPKKIL+LMNV GLTR
Sbjct: 195 RRDEEEEAEDRDDTSTLKKPRVVWSVELHQQFVAAVDQLGIDKAVPKKILELMNVPGLTR 254
Query: 254 ENVASHLQKFRLYLKRLSNETPQAGMV--AALGSKDSSYLRIGALDGFGDLRSLNSPGRL 311
ENVASHLQK+RLYL+RLS + + + L +++++ I +++G DL++L G+L
Sbjct: 255 ENVASHLQKYRLYLRRLSGVSQHQNNMNNSFLSPQEATFGTISSINGI-DLQTLAVAGQL 313
Query: 312 SSSAISSSYVPGNMFGRFNSTSGLSMHGIASSGMIQPGHSQSFNTSFNTIGKIQQAMFPA 371
+ ++++ G GR +G+ M + + SF G+ QQ
Sbjct: 314 PAQSLATLQAAG--LGRPTGKAGVPMPLMDQRNLF------SFENPRLRFGEGQQQHLST 365
Query: 372 NRISNLFQGVRTSSELNQLPQSKSTTQ-IGDFN-HINSPTT 410
++ NL G+ T+ E QL +TQ IG N +N+ T
Sbjct: 366 SKPMNLLHGIPTNMEPKQLANLHQSTQSIGSLNMRVNASAT 406
>gi|255556280|ref|XP_002519174.1| sensor histidine kinase, putative [Ricinus communis]
gi|223541489|gb|EEF43038.1| sensor histidine kinase, putative [Ricinus communis]
Length = 682
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 188/400 (47%), Positives = 258/400 (64%), Gaps = 22/400 (5%)
Query: 9 SAGCEDGDI--DKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLREN 66
S + G++ D+FP G+RVL VDDDPTCL +LE LR C YEVT N+A TAL +LREN
Sbjct: 16 SVAWKAGEVVPDQFPAGLRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAETALSLLREN 75
Query: 67 RNNFDLVISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKP 126
+N +D+VISDVHMPDMDGFKLLEH+GLEMDLPVIM+SA +VMKG+THGACDYL+KP
Sbjct: 76 KNGYDIVISDVHMPDMDGFKLLEHIGLEMDLPVIMMSADEAKSVVMKGVTHGACDYLIKP 135
Query: 127 VRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKR 186
VRIE LKNIWQHV+R+K+ KD + + E + S+ ++ N ++++KR
Sbjct: 136 VRIEALKNIWQHVVRKKRNEWKDLEQSGSVEEGDRQPKQSEDADYSSSANEGNWRNSKKR 195
Query: 187 KDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLM 246
KD++ + DE +D++T KKPRVVW+ ELH++FV AVNQLG+DKAVPKKIL+LM
Sbjct: 196 KDEEEEGDER--------DDTSTLKKPRVVWSVELHQQFVAAVNQLGIDKAVPKKILELM 247
Query: 247 NVEGLTRENVASHLQKFRLYLKRLSNETPQAGMV--AALGSKDSSYLRIGALDGFGDLRS 304
NV GLTRENVASHLQK+RLYL+RLS + + A + ++++Y + + +G DL++
Sbjct: 248 NVPGLTRENVASHLQKYRLYLRRLSGVSQHQNNLGNAFISPQEATYGPLSSFNGI-DLQT 306
Query: 305 LNSPGRLSSSAISSSYVPGNMFGRFNSTSGLSMHGIASSGMIQPGHSQSFNTSFNTIGKI 364
L + G+L + ++++ G GR S + + + + SF G+
Sbjct: 307 LAATGQLPAQSLATLQAAG--LGRSAVKSRMPIPIVDQRNLF------SFENPKLRFGEG 358
Query: 365 QQAMFPANRISNLFQGVRTSSELNQLPQSKSTTQ-IGDFN 403
QQ ++ NL G+ TS E QL + Q IG N
Sbjct: 359 QQQQLNNSKQMNLLHGIPTSMEPKQLANIHHSAQSIGSMN 398
>gi|356564542|ref|XP_003550512.1| PREDICTED: two-component response regulator ARR2-like [Glycine max]
Length = 677
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 185/393 (47%), Positives = 257/393 (65%), Gaps = 20/393 (5%)
Query: 14 DGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLV 73
D D+FP G+RVL VDDDPTCL +LE LR C YEVT N+A TAL +LREN+N FD+V
Sbjct: 23 DAVSDQFPAGLRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAETALSLLRENKNGFDIV 82
Query: 74 ISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELK 133
ISDVHMPDMDGFKLLEH+GLEMDLPVIM+SA +VMKG+THGACDYL+KPVRIE LK
Sbjct: 83 ISDVHMPDMDGFKLLEHIGLEMDLPVIMMSADDGKSVVMKGVTHGACDYLIKPVRIEALK 142
Query: 134 NIWQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDE 193
NIWQHV+R++K N+ + E S A EG + ++ +D + +N ++ +
Sbjct: 143 NIWQHVVRKRK------NEWKDAEQSG-SAEEGDRHPKASDEADYSSSANEGSW-RNSKK 194
Query: 194 DEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTR 253
D +++ + +D++T KKPRVVW+ ELH++FV AV+QLG+DKAVPKKIL+LMNV GLTR
Sbjct: 195 RRDEEEEAEDRDDTSTLKKPRVVWSVELHQQFVAAVDQLGIDKAVPKKILELMNVPGLTR 254
Query: 254 ENVASHLQKFRLYLKRLSNETPQAGMV--AALGSKDSSYLRIGALDGFGDLRSLNSPGRL 311
ENVASHLQK+RLYL+RLS + + + LG +++++ I +++G DL++L G+L
Sbjct: 255 ENVASHLQKYRLYLRRLSGVSQHQNNLNNSFLGPQEATFGTISSINGI-DLQTLAVAGQL 313
Query: 312 SSSAISSSYVPGNMFGRFNSTSGLSMHGIASSGMIQPGHSQSFNTSFNTIGKIQQAMFPA 371
+ ++++ G GR + +G+ + + + SF G+ Q
Sbjct: 314 PAQSLATLQAAG--LGRSTAKAGVPIPLMDQRNLF------SFENPRLRFGEGQPQHLST 365
Query: 372 NRISNLFQGVRTSSELNQLPQSKSTTQ-IGDFN 403
++ NL G+ T+ E QL +TQ IG N
Sbjct: 366 SKPMNLLHGIPTNMEPKQLANLHQSTQSIGGLN 398
>gi|224130444|ref|XP_002328610.1| type-b response regulator [Populus trichocarpa]
gi|222838592|gb|EEE76957.1| type-b response regulator [Populus trichocarpa]
Length = 671
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 181/406 (44%), Positives = 247/406 (60%), Gaps = 46/406 (11%)
Query: 1 MTAEERMGSAGCEDGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTAL 60
M+ G DG D+FP G+RVL VDDDPTCL +LE LR C+YEVT N+A AL
Sbjct: 11 MSTATSGGVWKASDGASDQFPAGLRVLVVDDDPTCLVILEKMLRTCRYEVTKCNRAEIAL 70
Query: 61 KMLRENRNNFDLVISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGAC 120
+LREN+N +D+VISDVHMPDMDGFKLLE +GLEMDLPVIM+SA +VMKG+THGAC
Sbjct: 71 SLLRENKNGYDIVISDVHMPDMDGFKLLEQIGLEMDLPVIMMSADDGKNVVMKGVTHGAC 130
Query: 121 DYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNG 180
DYL+KP+RIE LKNIWQHV+R++K KD + S + G
Sbjct: 131 DYLIKPIRIEALKNIWQHVVRKRKNEWKD---------------------LEQSGSVEEG 169
Query: 181 KSNRKRKDQDGDEDEDGDDDGHENED--------------STTQKKPRVVWTPELHRKFV 226
++++ +D D ++ +N ++ KKPRVVW+ ELH++FV
Sbjct: 170 GDRQQKQPEDADYSSSANEGSWKNSKRRKDEEEEAEERDDTSALKKPRVVWSVELHQQFV 229
Query: 227 GAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKRLSNETP-QAGMVAALGS 285
AVNQLG+DKAVPKKIL+LMNV GLTRENVASHLQK+RLYL+RLS + Q GM ++ S
Sbjct: 230 AAVNQLGIDKAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGVSQHQNGMGSSFIS 289
Query: 286 -KDSSYLRIGALDGFGDLRSLNSPGRLSSSAISSSYVPGNMFGRFNSTSGLSMHGIASSG 344
++++Y + +L+G DL++L + G+L + ++++ G GR + + M +
Sbjct: 290 PQEATYGPLSSLNGL-DLQTLATAGQLPAQSLATLQAAG--LGRSTAKPRMPMPIVDQRN 346
Query: 345 MIQPGHSQSFNTSFNTIGKIQQAMFPANRISNLFQGVRTSSELNQL 390
+ SF G+ QQ + +NL G+ T+ E NQL
Sbjct: 347 LF------SFENPKLRFGEGQQQHLNNGKQTNLLHGIPTTMEPNQL 386
>gi|15236580|ref|NP_194920.1| two-component response regulator ARR10 [Arabidopsis thaliana]
gi|38257358|sp|O49397.1|ARR10_ARATH RecName: Full=Two-component response regulator ARR10; AltName:
Full=Receiver-like protein 4
gi|2827643|emb|CAA16597.1| predicted protein [Arabidopsis thaliana]
gi|3549641|emb|CAA06432.1| receiver-like protein 4 [Arabidopsis thaliana]
gi|7270096|emb|CAB79910.1| predicted protein [Arabidopsis thaliana]
gi|27808620|gb|AAO24590.1| At4g31920 [Arabidopsis thaliana]
gi|110736270|dbj|BAF00105.1| predicted protein [Arabidopsis thaliana]
gi|332660579|gb|AEE85979.1| two-component response regulator ARR10 [Arabidopsis thaliana]
Length = 552
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 187/352 (53%), Positives = 237/352 (67%), Gaps = 29/352 (8%)
Query: 17 IDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISD 76
+D+FP+GMRVLAVDDD TCL++L+ L+ CQY VT TNQA TAL++LREN+N FDLVISD
Sbjct: 10 LDQFPVGMRVLAVDDDQTCLRILQTLLQRCQYHVTTTNQAQTALELLRENKNKFDLVISD 69
Query: 77 VHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIW 136
V MPDMDGFKLLE VGLEMDLPVIMLSA+ D K VMKG+ HGACDYLLKPVRIEELKNIW
Sbjct: 70 VDMPDMDGFKLLELVGLEMDLPVIMLSAHSDPKYVMKGVKHGACDYLLKPVRIEELKNIW 129
Query: 137 QHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDED 196
QHV+R+ K+ + S V G +GN D K+NRKRK+Q E+E+
Sbjct: 130 QHVVRKSKL---------KKNKSNVSNG--------SGNCD---KANRKRKEQ--YEEEE 167
Query: 197 GDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENV 256
++ G++N+D T QKKPRV+WT ELH KF+ AV+ LGV++AVPKKILDLMNV+ LTRENV
Sbjct: 168 EEERGNDNDDPTAQKKPRVLWTHELHNKFLAAVDHLGVERAVPKKILDLMNVDKLTRENV 227
Query: 257 ASHLQKFRLYLKRLSNETPQAGMVAALGSKDSSYLRIGALDGFGDLRSLNSPGRLSSSAI 316
ASHLQKFR+ LK++S++ Q AA+ DS ++++ + G G + + S
Sbjct: 228 ASHLQKFRVALKKVSDDAIQQANRAAI---DSHFMQMNSQKGLGGFYHHHRGIPVGSGQF 284
Query: 317 SSSYVPGNMFGRFNSTSGLSMHGIASSGMIQPGHSQSFNTSFNTIGKIQQAM 368
M ++S L +GM QP S SF + N G I Q +
Sbjct: 285 HGGTT---MMRHYSSNRNLGRLNSLGAGMFQPV-SSSFPRNHNDGGNILQGL 332
>gi|33330870|gb|AAQ10678.1| type-B response regulator [Catharanthus roseus]
Length = 643
Score = 331 bits (849), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 194/412 (47%), Positives = 269/412 (65%), Gaps = 29/412 (7%)
Query: 14 DGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLV 73
DG D+FP G+RVL VDDDPTCL++LE L+ C YEVT N+A ALK+LR+NRN +D+V
Sbjct: 26 DGVSDQFPAGLRVLVVDDDPTCLRILEKMLKNCLYEVTKCNRAEIALKLLRDNRNGYDIV 85
Query: 74 ISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELK 133
ISDVHMPDMDGFKLLE VGLEMDLPVIM+SA +VMKG+THGACDYL+KPVRIE LK
Sbjct: 86 ISDVHMPDMDGFKLLEQVGLEMDLPVIMMSADDSKNVVMKGVTHGACDYLIKPVRIEALK 145
Query: 134 NIWQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGA-----MSTGNSDQNGKSNRKRKD 188
NIWQHV+R+ K K+++ +++ V GE Q S+ ++ N K+++KRKD
Sbjct: 146 NIWQHVVRKGKHEWKEKDY---EQSGSVEDGERQQKPNEDVDYSSSANEGNWKNSKKRKD 202
Query: 189 QDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNV 248
+ D+ E +DS+T KKPRVVW+ ELH++FV AVNQLG+DKAVPKKIL+LMNV
Sbjct: 203 DEEDQ--------EEKDDSSTLKKPRVVWSVELHQQFVAAVNQLGIDKAVPKKILELMNV 254
Query: 249 EGLTRENVASHLQKFRLYLKRLSNETP-QAGM-VAALGSKDSSYLRIGALDGFGDLRSLN 306
GLTRENVASHLQK+RLYL+R+S + Q G+ + +G+ D+++ + +++G D ++L
Sbjct: 255 PGLTRENVASHLQKYRLYLRRVSGVSQHQNGLNNSFMGTPDATFGSMSSINGL-DFQALA 313
Query: 307 SPGRLSSSAISSSYVPGNMFGRFNSTSGLSMHGIASSGMIQPGHSQSFNTSFNTIGKIQQ 366
+ G++ + +++S + GR S +SM + + SF G+ QQ
Sbjct: 314 ATGQIPAQSLAS--LQAAAIGRPTSKPTISMPVVDQRNLF------SFEPHKLRFGEGQQ 365
Query: 367 AMFPANRISNLFQGVRTSSELNQLPQSKSTTQIGDFNHINSPTTSMAATGFT 418
+ + + +L G+ T+ E QL + Q F IN +S A+ G T
Sbjct: 366 QLNGSTKQISLLHGIPTNMEPKQLASLNQSAQT--FGGINMQVSSQASQGNT 415
>gi|356556050|ref|XP_003546340.1| PREDICTED: two-component response regulator ARR2-like [Glycine max]
Length = 672
Score = 331 bits (848), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 191/397 (48%), Positives = 258/397 (64%), Gaps = 24/397 (6%)
Query: 18 DKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDV 77
D+FP G+RVL VDDDPTCL +LE LRAC YEVT +A AL +LREN+N FD+V+SDV
Sbjct: 23 DQFPAGLRVLVVDDDPTCLMILERMLRACLYEVTKCQRAEVALSLLRENKNGFDIVLSDV 82
Query: 78 HMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQ 137
HMPDMDGFKLLEH+GLEMDLPVIM+SA +VMKG+THGACDYL+KPVRIE LKNIWQ
Sbjct: 83 HMPDMDGFKLLEHIGLEMDLPVIMMSADDGKHVVMKGVTHGACDYLIKPVRIEALKNIWQ 142
Query: 138 HVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDG 197
HVIR++K G +D + Q S EG Q + + D + N R + + D
Sbjct: 143 HVIRKRKNGLRD----VEQSGS---VEEGDQPPKVSDDGDYSSSVNEARSSK---KRRDE 192
Query: 198 DDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVA 257
D++G E +DS+T KKPRVVW+ ELH++F+ AVNQLG+DKAVPKKIL+LMNV GLTRENVA
Sbjct: 193 DEEGDEKDDSSTLKKPRVVWSVELHQQFMAAVNQLGIDKAVPKKILELMNVPGLTRENVA 252
Query: 258 SHLQKFRLYLKRLSNETPQAGMV--AALGSKDSSYLRIGALDGFGDLRSLNSPGRLSSSA 315
SHLQK+RLYL+RLS + Q G + + + S+++++ +++G DL++L++ G+ S +
Sbjct: 253 SHLQKYRLYLRRLSGVSQQQGNLNNSFMSSQEATFGGT-SINGI-DLQTLSAAGQFPSQS 310
Query: 316 ISSSYVPGNMFGRFNSTSGLSMHGIASSGMIQPGHSQSFNTSFNTIGKIQQAMFPANRIS 375
++ G GR + +G+ M + SF G+ ++
Sbjct: 311 LAKLQATG--LGRTTAKAGVPMPLSDQKNLF------SFENPRLRFGEGSLQHLSNSKPI 362
Query: 376 NLFQGVRTSSELNQLPQSKSTTQ-IGDFN-HINSPTT 410
NL G+ T+ E QL +TQ +G N +N+P T
Sbjct: 363 NLLHGIPTNMEPKQLANLHQSTQPLGSLNMRVNAPVT 399
>gi|356529278|ref|XP_003533222.1| PREDICTED: two-component response regulator ARR2-like [Glycine max]
Length = 673
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 187/396 (47%), Positives = 251/396 (63%), Gaps = 22/396 (5%)
Query: 18 DKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDV 77
D+FP G+RVL VDDDPTCL +LE LRAC YEVT +A AL +LREN+N FD+V+SDV
Sbjct: 23 DQFPAGLRVLVVDDDPTCLMILERMLRACLYEVTKCKRAEVALSLLRENKNGFDIVLSDV 82
Query: 78 HMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQ 137
HMPDMDGFKLLEH+GLEMDLPVIM+SA ++VMKG+THGACDYL+KPVRIE LKNIWQ
Sbjct: 83 HMPDMDGFKLLEHIGLEMDLPVIMMSADDGKQVVMKGVTHGACDYLIKPVRIEALKNIWQ 142
Query: 138 HVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDG 197
HV+R +K G +D + +G +G SD S+ + + + D
Sbjct: 143 HVVRMRKNGLRDVEQ----------SGSMEEGDRPPKGSDDGNYSSSVNEAKSSKKRRDE 192
Query: 198 DDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVA 257
D++G E +DS+T KKPRVVW+ ELH++F+ VNQLG+DKAVPKKIL+LMNV GLTRENVA
Sbjct: 193 DEEGDERDDSSTLKKPRVVWSVELHQQFMAVVNQLGIDKAVPKKILELMNVPGLTRENVA 252
Query: 258 SHLQKFRLYLKRLSNETPQAGMVA-ALGSKDSSYLRIGALDGFGDLRSLNSPGRLSSSAI 316
SHLQK+RLYL+RLS + Q G ++ + S + +++G DL++L++ G+ S ++
Sbjct: 253 SHLQKYRLYLRRLSGVSQQQGNLSNSFMSSQEATFGGTSINGI-DLQTLSAAGQFPSQSL 311
Query: 317 SSSYVPGNMFGRFNSTSGLSMHGIASSGMIQPGHSQSFNTSFNTIGKIQQAMFPANRISN 376
+ G GR + +G+ M + SF G+ ++ N
Sbjct: 312 AKFQAAG--LGRTTAKAGMPMSLSDQKNLF------SFENPRLRFGEGSLQHLSNSKPIN 363
Query: 377 LFQGVRTSSELNQLPQSKSTTQ-IGDFN-HINSPTT 410
L G+ T+ E QL +TQ +G N +NSP T
Sbjct: 364 LLHGILTNMEPKQLANLHQSTQPLGSLNMRVNSPAT 399
>gi|359477139|ref|XP_002275142.2| PREDICTED: two-component response regulator ARR1-like [Vitis
vinifera]
Length = 681
Score = 328 bits (840), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 193/405 (47%), Positives = 264/405 (65%), Gaps = 26/405 (6%)
Query: 9 SAGCEDGDI--DKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLREN 66
S + GD+ D+FP G+RVL VDDDPTCL +LE LR C YEVT N+A TAL +LR N
Sbjct: 16 SGAWKAGDVVPDQFPAGLRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAETALSLLRGN 75
Query: 67 RNNFDLVISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKP 126
++ FD+VISDVHMPDMDGFKLLEH+GLEMDLPVIM+SA +VMKG+THGACDYL+KP
Sbjct: 76 KSGFDIVISDVHMPDMDGFKLLEHIGLEMDLPVIMMSADDGKHVVMKGVTHGACDYLIKP 135
Query: 127 VRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKR 186
VRIE LKNIWQHV+R++K KD + + E+ S+ ++ N K++++R
Sbjct: 136 VRIEALKNIWQHVVRKRKNEWKDLEQSGSVEDGDRQQKPSEDVDYSSSANEGNWKNSKRR 195
Query: 187 KDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLM 246
KD++ D + E +D++T KKPRVVW+ ELH++FV AVNQLG+DKAVPKKIL+LM
Sbjct: 196 KDEEDDAE--------ERDDTSTLKKPRVVWSVELHQQFVAAVNQLGIDKAVPKKILELM 247
Query: 247 NVEGLTRENVASHLQKFRLYLKRLSNETP-QAGM-VAALGSKDSSYLRIGALDGFGDLRS 304
NV GLTRENVASHLQK+RLYL+RLS + Q G+ + +G +++++ I +L+G DL++
Sbjct: 248 NVPGLTRENVASHLQKYRLYLRRLSGVSQHQNGLNNSFMGPQEATFGSISSLNGL-DLQT 306
Query: 305 LNSPGRLSSSAISSSYVPGNMFGRFNSTSGLSMHGIASSGMIQPGHSQSFNTSFNTIGK- 363
L G+L + ++++ G GR SGL M + + SF G+
Sbjct: 307 LAVAGQLPAQSLATLQAAG--LGRSTGKSGLPMPLVDQRNLF------SFEAPKFRYGEG 358
Query: 364 --IQQAMFPANRISNLFQGVRTSSELNQLPQSKSTTQIGDFNHIN 406
QQ + +++ NL G+ T+ E QL + + Q F IN
Sbjct: 359 QQQQQQLSNSSKQMNLLHGIPTTMEPKQLATLRHSAQ--SFGSIN 401
>gi|359472591|ref|XP_002281291.2| PREDICTED: two-component response regulator ARR2-like [Vitis
vinifera]
Length = 643
Score = 328 bits (840), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 181/355 (50%), Positives = 235/355 (66%), Gaps = 33/355 (9%)
Query: 8 GSAGCEDGDI---DKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLR 64
G+ G D+ D+FP G+RVL VDDD TCLK+LE LR C Y VT +QA AL +LR
Sbjct: 14 GTNGSCKADVVVSDQFPAGLRVLVVDDDVTCLKILEQMLRRCLYHVTTCSQATIALNILR 73
Query: 65 ENRNNFDLVISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLL 124
E + FD+V+SDVHMPDMDG+KLLEHVGLEMDLPVIM+SA G T VM+GI HGACDYL+
Sbjct: 74 EKKGCFDIVLSDVHMPDMDGYKLLEHVGLEMDLPVIMMSADGRTSAVMRGIRHGACDYLI 133
Query: 125 KPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRVGAGE-------GGQGA--MSTGN 175
KP+R EELKNIWQHV+R+K N+ N+E+ G+ E GG+ A S+ N
Sbjct: 134 KPIREEELKNIWQHVVRKK------WNE--NKEHEHSGSLEDNDRHKRGGEDAEYASSVN 185
Query: 176 SDQNG--KSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLG 233
G K +KR+D +D DD ENED +T KKPRVVW+ ELH++FV AVNQLG
Sbjct: 186 EGAEGILKGQKKRRD-----SKDEDDGELENEDPSTSKKPRVVWSVELHQQFVSAVNQLG 240
Query: 234 VDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKRLSNETPQAGMVA-ALGSKDSSYLR 292
+DKAVPK+IL+LMNV GLTRENVASHLQKFRLYLKRLS Q G + + ++
Sbjct: 241 IDKAVPKRILELMNVPGLTRENVASHLQKFRLYLKRLSGVAQQQGGIPNSFCGPVEPNVK 300
Query: 293 IGALDGFGDLRSLNSPGRLSSSAISSSYVPGNMFGRFNSTSGLSMHGIASSGMIQ 347
+G+L F D+++L + G++ +++ + + GR TS L + + ++Q
Sbjct: 301 LGSLGRF-DIQALAASGQIPPQTLAA--LQAELLGR--PTSNLVLPAMDQPALLQ 350
>gi|255584969|ref|XP_002533196.1| two-component sensor histidine kinase bacteria, putative [Ricinus
communis]
gi|223526994|gb|EEF29188.1| two-component sensor histidine kinase bacteria, putative [Ricinus
communis]
Length = 669
Score = 328 bits (840), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 170/317 (53%), Positives = 219/317 (69%), Gaps = 17/317 (5%)
Query: 18 DKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDV 77
D+FP G+RVL VDDD TCL++LE LR C Y VT +QA AL +LRE + FD+V+SDV
Sbjct: 37 DQFPAGLRVLVVDDDTTCLRILEQMLRRCLYHVTTCSQAKVALNLLRERKGCFDVVLSDV 96
Query: 78 HMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQ 137
HMPDMDGFKLLEHVGLEMDLPVIM+SA G T VM+GI HGACDYL+KP+R EELKNIWQ
Sbjct: 97 HMPDMDGFKLLEHVGLEMDLPVIMMSADGRTSAVMRGIRHGACDYLIKPIREEELKNIWQ 156
Query: 138 HVIRRKKVGPKDQNKLLN-----QENSRVGAGEGGQGAMSTGNSDQNGK-SNRKRKDQDG 191
HV+R+K +NK + ++N R G S+ N G +KR+
Sbjct: 157 HVVRKK----WHENKEIEHSGSLEDNDRHKRGNEDAEYTSSVNEGTEGVLKGQKRRSNSK 212
Query: 192 DEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGL 251
DED DG+ D ++D +T KKPRVVW+ ELH++FV AVNQLG+DKAVPK+IL+LMNV GL
Sbjct: 213 DED-DGEPD---SDDPSTSKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGL 268
Query: 252 TRENVASHLQKFRLYLKRLSNETPQAGMVAALGSKDSSYLRIGALDGFGDLRSLNSPGRL 311
TRENVASHLQKFRLYLKRLS Q G+ + S +++ +L F D+++L + G++
Sbjct: 269 TRENVASHLQKFRLYLKRLSGVAQQGGISSTFCGPMDSNVKLNSLGRF-DIQALAASGQI 327
Query: 312 SSSAISSSYVPGNMFGR 328
+++ + +FGR
Sbjct: 328 PPQTLAALH--AELFGR 342
>gi|296083291|emb|CBI22927.3| unnamed protein product [Vitis vinifera]
Length = 533
Score = 327 bits (839), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 193/418 (46%), Positives = 268/418 (64%), Gaps = 25/418 (5%)
Query: 9 SAGCEDGDI--DKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLREN 66
S + GD+ D+FP G+RVL VDDDPTCL +LE LR C YEVT N+A TAL +LR N
Sbjct: 16 SGAWKAGDVVPDQFPAGLRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAETALSLLRGN 75
Query: 67 RNNFDLVISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKP 126
++ FD+VISDVHMPDMDGFKLLEH+GLEMDLPVIM+SA +VMKG+THGACDYL+KP
Sbjct: 76 KSGFDIVISDVHMPDMDGFKLLEHIGLEMDLPVIMMSADDGKHVVMKGVTHGACDYLIKP 135
Query: 127 VRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKR 186
VRIE LKNIWQHV+R++K KD + + E+ S+ ++ N K++++R
Sbjct: 136 VRIEALKNIWQHVVRKRKNEWKDLEQSGSVEDGDRQQKPSEDVDYSSSANEGNWKNSKRR 195
Query: 187 KDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLM 246
KD++ D + E +D++T KKPRVVW+ ELH++FV AVNQLG+DKAVPKKIL+LM
Sbjct: 196 KDEEDDAE--------ERDDTSTLKKPRVVWSVELHQQFVAAVNQLGIDKAVPKKILELM 247
Query: 247 NVEGLTRENVASHLQKFRLYLKRLSNETP-QAGM-VAALGSKDSSYLRIGALDGFGDLRS 304
NV GLTRENVASHLQK+RLYL+RLS + Q G+ + +G +++++ I +L+G DL++
Sbjct: 248 NVPGLTRENVASHLQKYRLYLRRLSGVSQHQNGLNNSFMGPQEATFGSISSLNGL-DLQT 306
Query: 305 LNSPGRLSSSAISSSYVPGNMFGRFNSTSGLSMHGIASSGMIQPGHSQSFNTSFNTIGK- 363
L G+L + ++++ G GR SGL M + + SF G+
Sbjct: 307 LAVAGQLPAQSLATLQAAG--LGRSTGKSGLPMPLVDQRNLF------SFEAPKFRYGEG 358
Query: 364 --IQQAMFPANRISNLFQGVRTSSELNQLPQSKSTTQIGDFNHINSPTTSMAAT-GFT 418
QQ + +++ NL G+ T+ E QL + + Q N ++ + + GF
Sbjct: 359 QQQQQQLSNSSKQMNLLHGIPTTMEPKQLATLRHSAQAQILNETTEVSSEIKGSRGFV 416
>gi|298103714|emb|CBM42558.1| putative B-type response regulator 12 [Populus x canadensis]
Length = 690
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 181/420 (43%), Positives = 250/420 (59%), Gaps = 47/420 (11%)
Query: 1 MTAEERMGSAGCEDGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTAL 60
M+ G DG D+FP G+RVL VDDDPTCL +LE LR C+YEVT N+A AL
Sbjct: 11 MSTATSGGVWKASDGASDQFPAGLRVLVVDDDPTCLVILEKMLRTCRYEVTKCNRAEIAL 70
Query: 61 KMLRENRNNFDLVISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGAC 120
+LREN+N +D+VISDVHMPDMDGFKLLE +GLEMDLPVIM+SA +VMKG+THGAC
Sbjct: 71 SLLRENKNGYDIVISDVHMPDMDGFKLLEQIGLEMDLPVIMMSADDGKNVVMKGVTHGAC 130
Query: 121 DYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNG 180
DYL+KP+RIE LKNIWQHV+R++K +D + S + G
Sbjct: 131 DYLIKPIRIEALKNIWQHVVRKRKNEWRD---------------------LEQSGSVEEG 169
Query: 181 KSNRKRKDQDGDEDEDGDDDGHENED--------------STTQKKPRVVWTPELHRKFV 226
++++ +D D ++ +N ++ KKPRVVW+ ELH++FV
Sbjct: 170 GDRQQKQPEDADYSSSANEGSWKNSKRRKDEEEETEERDDTSALKKPRVVWSVELHQQFV 229
Query: 227 GAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKRLSNETP-QAGMVAALGS 285
AVNQLG+DKAVPKKIL+LMNV GLTRENVASHLQK+RLYL+R+S + Q GM + S
Sbjct: 230 AAVNQLGIDKAVPKKILELMNVPGLTRENVASHLQKYRLYLRRVSGVSQHQNGMGSTFIS 289
Query: 286 -KDSSYLRIGALDGFGDLRSLNSPGRLSSSAISSSYVPGNMFGRFNSTSGLSMHGIASSG 344
++++Y + +L+G DL++L + G+L + ++++ G GR + + M +
Sbjct: 290 PQEATYGPLSSLNGL-DLQTLATAGQLPAQSLATLQAAG--LGRSTAKPRMPMPIVDQRN 346
Query: 345 MIQPGHSQSFNTSFNTIGKIQQAMFPANRISNLFQGVRTSSELNQLPQSKSTTQ-IGDFN 403
+ SF G+ QQ + +NL G+ T+ E QL + Q +G N
Sbjct: 347 LF------SFENPKLRFGEGQQQHLNNGKQTNLLHGIPTTMEPKQLANLHHSAQSLGSMN 400
>gi|302794410|ref|XP_002978969.1| type B response regulator [Selaginella moellendorffii]
gi|300153287|gb|EFJ19926.1| type B response regulator [Selaginella moellendorffii]
Length = 580
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 177/359 (49%), Positives = 231/359 (64%), Gaps = 49/359 (13%)
Query: 1 MTAEERMGSAGCEDGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTAL 60
M ++ G A + D+ KFP G+RVLAVDDDPTCL++L LR C YEVT+ +A AL
Sbjct: 1 MVGVDKTGIAMPQAKDLGKFPAGLRVLAVDDDPTCLRILAQMLRKCSYEVTMCTRATEAL 60
Query: 61 KMLRENRNNFDLVISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGAC 120
+LREN++ FDL+ISDV MPDMDGFKLLE+VGLEMDLPVIM S+ G+T +VMKG+ HGAC
Sbjct: 61 SLLRENKDRFDLMISDVFMPDMDGFKLLEYVGLEMDLPVIMTSSNGETGIVMKGVIHGAC 120
Query: 121 DYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQEN---------------------- 158
DYL+KPVR EEL+NIWQHV+R+K+ +D + E+
Sbjct: 121 DYLIKPVRTEELRNIWQHVVRKKRNEARDVEASGSVEDGGERNHHHHHQQQQHHSSQQQR 180
Query: 159 --SRVGAGE----GGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQKK 212
S + GE GG G D N K ++RKD DGDE + H+N+DS+T KK
Sbjct: 181 RASTIDEGEFNSDGG------GGGDPNWKLAKRRKD-DGDETAE-----HDNDDSSTLKK 228
Query: 213 PRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKRLSN 272
RVVW+ ELH++FV AVNQLG+DKAVPKKIL+ M+V GLTRENVASHLQK+RLYL+RLS
Sbjct: 229 QRVVWSVELHQQFVNAVNQLGIDKAVPKKILESMSVHGLTRENVASHLQKYRLYLRRLSG 288
Query: 273 ETPQAG-----MVAALGSKDSSYLRIGALDGFGDLRSLNSPGRL-SSSAISSSYVPGNM 325
PQ V ++S+ AL+ G++R+L + +SS + + + GN+
Sbjct: 289 VQPQGSGANGHAVTFCSPAEASF---AALNALGEMRTLPPSAQFQNSSPTALASIQGNL 344
>gi|313184318|emb|CBL94183.1| putative type-b response regulator (sensor histidine kinase) [Malus
x domestica]
Length = 674
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 186/386 (48%), Positives = 250/386 (64%), Gaps = 22/386 (5%)
Query: 9 SAGCEDGDI--DKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLREN 66
S + GD+ D+FP G+RVL VDDDPTCL +LE LR C YEVT N+A AL +LREN
Sbjct: 16 SGAWKSGDVVTDQFPAGLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEIALSLLREN 75
Query: 67 RNNFDLVISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKP 126
+N FD+VISDVHMPDMDGFKLLE VGLEMDLPVIM+SA +VMKG+THGACDYL+KP
Sbjct: 76 KNGFDIVISDVHMPDMDGFKLLEQVGLEMDLPVIMMSADDGQSVVMKGVTHGACDYLIKP 135
Query: 127 VRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKR 186
VRIE LKNIWQHV+R+KK KD + + E S+ ++ K++++R
Sbjct: 136 VRIEALKNIWQHVVRKKKNEWKDVEQSGSVEEGDRQQKPSEDADYSSSANEGTWKNSKRR 195
Query: 187 KDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLM 246
KD++ + D E +DS+T KKPRVVW+ ELH++FVGAVNQLG+DKAVPKKIL+LM
Sbjct: 196 KDEEEETD--------ERDDSSTLKKPRVVWSVELHQQFVGAVNQLGIDKAVPKKILELM 247
Query: 247 NVEGLTRENVASHLQKFRLYLKRLSNETPQAGMV--AALGSKDSSYLRIGALDGFGDLRS 304
NV GLTRENVASHLQK+RLYL+RLS + + + + +++S+ + +L G DL++
Sbjct: 248 NVPGLTRENVASHLQKYRLYLRRLSGVSQHQNNLGNSFMSPQEASFGAMSSLSGL-DLQT 306
Query: 305 LNSPGRLSSSAISSSYVPGNMFGRFNSTSGLSMHGIASSGMIQPGHSQSFNTSFNTIGKI 364
L G+L + ++++ G GR SG+ M + + SF +
Sbjct: 307 LAVTGQLPAQSLATLQAAG--LGRSTIKSGVPMPLVDQRNLF------SFENPKLRFAEG 358
Query: 365 QQAMFPANRISNLFQGVRTSSELNQL 390
Q + +++ NL G+ T+ E QL
Sbjct: 359 QHHL-SSSKPMNLLHGIPTTMEAKQL 383
>gi|298103716|emb|CBM42559.1| putative B-type response regulator 13 [Populus x canadensis]
Length = 670
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 186/389 (47%), Positives = 253/389 (65%), Gaps = 28/389 (7%)
Query: 9 SAGCEDGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRN 68
S G D+FP G+RVL VDDDPTCL +LE LR C YEVT N+A AL +LRENRN
Sbjct: 2 STASSGGVSDQFPAGLRVLVVDDDPTCLVILEKMLRTCLYEVTKCNRAEIALSLLRENRN 61
Query: 69 NFDLVISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVR 128
+D+VISDVHMPDMDGFKLLE +GLEMDLPVIM+SA +VMKG+THGACDYL+KP+R
Sbjct: 62 GYDIVISDVHMPDMDGFKLLELIGLEMDLPVIMMSADDGKNVVMKGVTHGACDYLIKPIR 121
Query: 129 IEELKNIWQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQ-----GAMSTGNSDQNGKSN 183
IE LKNIWQHV+R++K KD L Q S G+ Q S+ ++ + K++
Sbjct: 122 IEALKNIWQHVVRKRKNEWKD----LEQSGSVEEGGDRPQKQSEDADYSSSANEGSWKNS 177
Query: 184 RKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKIL 243
++RKD++ + D E +D++T KKPRVVW+ ELH++FV AVNQLG+DKAVPKKIL
Sbjct: 178 KRRKDEEEEAD--------ERDDTSTLKKPRVVWSVELHQQFVAAVNQLGIDKAVPKKIL 229
Query: 244 DLMNVEGLTRENVASHLQKFRLYLKRLSNETP-QAGMV-AALGSKDSSYLRIGALDGFGD 301
+LMNV GLTRENVASHLQK+RLYL+RLS + Q+GM + + ++++Y + +L+G D
Sbjct: 230 ELMNVPGLTRENVASHLQKYRLYLRRLSGVSQHQSGMGNSFISPQEATYGPLSSLNGL-D 288
Query: 302 LRSLNSPGRLSSSAISSSYVPGNMFGRFNSTSGLSMHGIASSGMIQPGHSQSFNTSFNTI 361
L++L + G++ + ++++ G GR + + M + + SF
Sbjct: 289 LQTLAAAGQIPAQSLATLQAAG--LGRSTAKPRMPMPIVDQRNLF------SFENPKLRF 340
Query: 362 GKIQQAMFPANRISNLFQGVRTSSELNQL 390
G+ QQ + NL G+ T+ E QL
Sbjct: 341 GEGQQQHLNNGKQINLLHGIPTTMEPKQL 369
>gi|343407540|gb|AEM23771.1| RRB1 type-b response regulator [Nicotiana tabacum]
Length = 654
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 169/354 (47%), Positives = 230/354 (64%), Gaps = 26/354 (7%)
Query: 10 AGCEDGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNN 69
A C+ D FP+G+RVL VDDD CL++LE LR C+Y VT QA AL +LRE R +
Sbjct: 9 ATCKSEATDTFPVGLRVLVVDDDIVCLRILEQMLRKCKYSVTTCTQATVALNLLRERRGS 68
Query: 70 FDLVISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRI 129
FD+V+SDVHMPDMDGFKLLE VGLEMDLP+IM+S G T LVM+G+ HGACDYL+KP+R
Sbjct: 69 FDVVLSDVHMPDMDGFKLLELVGLEMDLPIIMMSGDGRTNLVMRGVQHGACDYLIKPIRD 128
Query: 130 EELKNIWQHVIRRK---KVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKR 186
EELKNIWQHV+R+K P+ L + + + G + + +D+ K +K+
Sbjct: 129 EELKNIWQHVVRKKCSFSKEPEYSGSLDDNDRHKRGNDDAECASSVIEGADRVLKPQKKK 188
Query: 187 KDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLM 246
+D ++ D+ EN+D TT KKPRVVW+ ELH++FV AVNQLG+DKAVPK+IL+LM
Sbjct: 189 RDA-----KEEDETEMENDDPTTAKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELM 243
Query: 247 NVEGLTRENVASHLQKFRLYLKRLSNETPQAGMVAALGSKDSSYL-------RIGALDGF 299
NV GLTRENVASHLQKFRLYLKRLS G+ G S+Y ++G+L F
Sbjct: 244 NVPGLTRENVASHLQKFRLYLKRLS------GVAQQQGGFPSTYCGPIEQNPKLGSLGRF 297
Query: 300 GDLRSLNSPGRLSSSAISSSYVPGNMFGRFNSTSGLSMHGIASSGMIQPGHSQS 353
D+++L + G++ +++ + + GR S+ L + + ++Q Q+
Sbjct: 298 -DIQALAASGQIPPETLTALH--AELLGR--SSGNLVLPSVEQPDLLQASLQQA 346
>gi|297737623|emb|CBI26824.3| unnamed protein product [Vitis vinifera]
Length = 428
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 178/342 (52%), Positives = 230/342 (67%), Gaps = 30/342 (8%)
Query: 18 DKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDV 77
D+FP G+RVL VDDD TCLK+LE LR C Y VT +QA AL +LRE + FD+V+SDV
Sbjct: 27 DQFPAGLRVLVVDDDVTCLKILEQMLRRCLYHVTTCSQATIALNILREKKGCFDIVLSDV 86
Query: 78 HMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQ 137
HMPDMDG+KLLEHVGLEMDLPVIM+SA G T VM+GI HGACDYL+KP+R EELKNIWQ
Sbjct: 87 HMPDMDGYKLLEHVGLEMDLPVIMMSADGRTSAVMRGIRHGACDYLIKPIREEELKNIWQ 146
Query: 138 HVIRRKKVGPKDQNKLLNQENSRVGAGE-------GGQGA--MSTGNSDQNG--KSNRKR 186
HV+R+K N+ N+E+ G+ E GG+ A S+ N G K +KR
Sbjct: 147 HVVRKK------WNE--NKEHEHSGSLEDNDRHKRGGEDAEYASSVNEGAEGILKGQKKR 198
Query: 187 KDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLM 246
+D +D DD ENED +T KKPRVVW+ ELH++FV AVNQLG+DKAVPK+IL+LM
Sbjct: 199 RD-----SKDEDDGELENEDPSTSKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELM 253
Query: 247 NVEGLTRENVASHLQKFRLYLKRLSNETPQAGMVA-ALGSKDSSYLRIGALDGFGDLRSL 305
NV GLTRENVASHLQKFRLYLKRLS Q G + + +++G+L F D+++L
Sbjct: 254 NVPGLTRENVASHLQKFRLYLKRLSGVAQQQGGIPNSFCGPVEPNVKLGSLGRF-DIQAL 312
Query: 306 NSPGRLSSSAISSSYVPGNMFGRFNSTSGLSMHGIASSGMIQ 347
+ G++ +++ + + GR TS L + + ++Q
Sbjct: 313 AASGQIPPQTLAA--LQAELLGR--PTSNLVLPAMDQPALLQ 350
>gi|302783917|ref|XP_002973731.1| type B response regulator [Selaginella moellendorffii]
gi|300158769|gb|EFJ25391.1| type B response regulator [Selaginella moellendorffii]
Length = 705
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 172/335 (51%), Positives = 227/335 (67%), Gaps = 26/335 (7%)
Query: 14 DGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLV 73
DG D+FP+GMRVL VDDD T L +LE LR C+Y VT +A TAL +LRE++N+FDLV
Sbjct: 25 DGSKDQFPVGMRVLVVDDDQTTLTILEAMLRRCRYNVTTCGKATTALALLREHKNDFDLV 84
Query: 74 ISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELK 133
ISDV+MPDMDGFKLLE VGLEMDLPVIM+S GD VMKGITHGACDYLLKPVR+EEL+
Sbjct: 85 ISDVYMPDMDGFKLLELVGLEMDLPVIMMSTDGDYNNVMKGITHGACDYLLKPVRMEELR 144
Query: 134 NIWQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDE 193
NIWQH++R++K ++ L E ++ G G+ ++ S +K +D E
Sbjct: 145 NIWQHLVRKRKNEARETETLTPAEADKLKGG--------GGDDVEHLSSACSKKRKDVKE 196
Query: 194 DEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTR 253
+++G D H++ED ++ KKPRVVW+ ELH++FV AVN+L +DKAVPKKIL+LM+V GLTR
Sbjct: 197 EDEGVD--HDSEDPSSLKKPRVVWSVELHQQFVNAVNKLNIDKAVPKKILELMDVPGLTR 254
Query: 254 ENVASHLQKFRLYLKRLSNETPQAGMVAALGSKDSSYLRIGALDGFGDLRSLNSPGRLSS 313
ENVASHLQK+RLYLKR+S + PQ + G D G ++G G G S
Sbjct: 255 ENVASHLQKYRLYLKRISAQQPQNSAGFSFGGAD------GPVEGRGH-------GSFSL 301
Query: 314 SAISSSYVPGNMFGRFNSTSGL-SMHGIASSGMIQ 347
A+ + V + GR +T+ L + + SG++Q
Sbjct: 302 QAVPA--VQQGVIGRIGTTNNLPASTALDQSGLLQ 334
>gi|94449082|gb|ABF19058.1| ARR2 [Arabidopsis thaliana]
gi|94449084|gb|ABF19059.1| ARR2 [Arabidopsis thaliana]
Length = 664
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 170/320 (53%), Positives = 219/320 (68%), Gaps = 39/320 (12%)
Query: 18 DKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDV 77
D FP +RVL VDDDPTCL +LE L C Y VT N+A AL +LR+N+N FD+VISDV
Sbjct: 22 DPFPANLRVLVVDDDPTCLMILERMLMTCLYRVTKCNRAEIALSLLRKNKNGFDIVISDV 81
Query: 78 HMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQ 137
HMPDMDGFKLLEHVGLEMDLPVIM+SA +V+KG+THGA DYL+KPVRIE LKNIWQ
Sbjct: 82 HMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRIEALKNIWQ 141
Query: 138 HVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQ------------------N 179
HV+R+K+ N+ N V GG + G+ D+ N
Sbjct: 142 HVVRKKR----------NEWN--VSEHSGGSIEDTGGDRDRQQQHREDADNNSSSVNEGN 189
Query: 180 GKSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVP 239
G+S+RKRK +E+ DD G + EDS++ KKPRVVW+ ELH++FV AVNQLGVDKAVP
Sbjct: 190 GRSSRKRK------EEEVDDQGDDKEDSSSLKKPRVVWSVELHQQFVAAVNQLGVDKAVP 243
Query: 240 KKILDLMNVEGLTRENVASHLQKFRLYLKRLSNETPQAGMV--AALGSKDSSYLRIGALD 297
KKIL++MNV GLTRENVASHLQK+R+YL+RL + G++ + + +D S+ + +L+
Sbjct: 244 KKILEMMNVPGLTRENVASHLQKYRIYLRRLGGVSQHQGIMNHSFMTGQDQSFGPLSSLN 303
Query: 298 GFGDLRSLNSPGRLSSSAIS 317
GF DL+SL G+L +++
Sbjct: 304 GF-DLQSLAVTGQLPPQSLA 322
>gi|302824731|ref|XP_002994006.1| hypothetical protein SELMODRAFT_187683 [Selaginella moellendorffii]
gi|300138168|gb|EFJ04946.1| hypothetical protein SELMODRAFT_187683 [Selaginella moellendorffii]
Length = 376
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 175/344 (50%), Positives = 225/344 (65%), Gaps = 49/344 (14%)
Query: 16 DIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVIS 75
D+ KFP G+RVLAVDDDPTCL++L LR C YEVT+ +A AL +LREN++ FDL+IS
Sbjct: 6 DLGKFPAGLRVLAVDDDPTCLRILAQMLRKCSYEVTMCTRATEALSLLRENKDRFDLMIS 65
Query: 76 DVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNI 135
DV MPDMDGFKLLE+VGLEMDLPVIM S+ G+T +VMKG+ HGACDYL+KPVR EEL+NI
Sbjct: 66 DVFMPDMDGFKLLEYVGLEMDLPVIMTSSNGETGIVMKGVIHGACDYLIKPVRTEELRNI 125
Query: 136 WQHVIRRKKVGPKDQNKLLNQEN------------------------SRVGAGE----GG 167
WQHV+R+K+ +D + E+ S + GE GG
Sbjct: 126 WQHVVRKKRNEARDVEASGSVEDGGERNHHHHHQQQQHHSSQQQRRASTIDEGEFNSDGG 185
Query: 168 QGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVG 227
G D N K ++RKD DGDE + H+N+DS+T KK RVVW+ ELH++FV
Sbjct: 186 ------GGGDPNWKLAKRRKD-DGDETAE-----HDNDDSSTLKKQRVVWSVELHQQFVN 233
Query: 228 AVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKRLSNETPQAG-----MVAA 282
AVNQLG+DKAVPKKIL+ M+V GLTRENVASHLQK+RLYL+RLS PQ V
Sbjct: 234 AVNQLGIDKAVPKKILESMSVHGLTRENVASHLQKYRLYLRRLSGVQPQGSGANGHAVTF 293
Query: 283 LGSKDSSYLRIGALDGFGDLRSLNSPGRL-SSSAISSSYVPGNM 325
D+S+ AL+ G++R+L + +SS + + + GN+
Sbjct: 294 CSPADASF---AALNALGEMRTLPPSAQFQNSSPTALASIQGNL 334
>gi|240255903|ref|NP_193346.4| two-component response regulator ARR2 [Arabidopsis thaliana]
gi|50400708|sp|Q9ZWJ9.1|ARR2_ARATH RecName: Full=Two-component response regulator ARR2; AltName:
Full=Receiver-like protein 5
gi|4210451|dbj|BAA74527.1| ARR2 protein [Arabidopsis thaliana]
gi|51969616|dbj|BAD43500.1| hypothetical protein [Arabidopsis thaliana]
gi|51970060|dbj|BAD43722.1| hypothetical protein [Arabidopsis thaliana]
gi|51971425|dbj|BAD44377.1| hypothetical protein [Arabidopsis thaliana]
gi|94958295|gb|ABF47278.1| ARR2 [Arabidopsis thaliana]
gi|94958297|gb|ABF47279.1| ARR2 [Arabidopsis thaliana]
gi|332658294|gb|AEE83694.1| two-component response regulator ARR2, partial [Arabidopsis
thaliana]
Length = 664
Score = 324 bits (831), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 170/320 (53%), Positives = 219/320 (68%), Gaps = 39/320 (12%)
Query: 18 DKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDV 77
D FP +RVL VDDDPTCL +LE L C Y VT N+A +AL +LR+N+N FD+VISDV
Sbjct: 22 DPFPANLRVLVVDDDPTCLMILERMLMTCLYRVTKCNRAESALSLLRKNKNGFDIVISDV 81
Query: 78 HMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQ 137
HMPDMDGFKLLEHVGLEMDLPVIM+SA +V+KG+THGA DYL+KPVRIE LKNIWQ
Sbjct: 82 HMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRIEALKNIWQ 141
Query: 138 HVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQ------------------N 179
HV+R+K+ N+ N V GG + G+ D+ N
Sbjct: 142 HVVRKKR----------NEWN--VSEHSGGSIEDTGGDRDRQQQHREDADNNSSSVNEGN 189
Query: 180 GKSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVP 239
G+S+RKRK +E+ DD G + EDS++ KKPRVVW+ ELH++FV AVNQLGVDKAVP
Sbjct: 190 GRSSRKRK------EEEVDDQGDDKEDSSSLKKPRVVWSVELHQQFVAAVNQLGVDKAVP 243
Query: 240 KKILDLMNVEGLTRENVASHLQKFRLYLKRLSNETPQAGMV--AALGSKDSSYLRIGALD 297
KKIL++MNV GLTRENVASHLQK+R+YL+RL + G + + + +D S+ + +L+
Sbjct: 244 KKILEMMNVPGLTRENVASHLQKYRIYLRRLGGVSQHQGNMNHSFMTGQDQSFGPLSSLN 303
Query: 298 GFGDLRSLNSPGRLSSSAIS 317
GF DL+SL G+L +++
Sbjct: 304 GF-DLQSLAVTGQLPPQSLA 322
>gi|42570473|ref|NP_850600.2| two-component response regulator ARR1 [Arabidopsis thaliana]
gi|222423228|dbj|BAH19591.1| AT3G16857 [Arabidopsis thaliana]
gi|332642354|gb|AEE75875.1| two-component response regulator ARR1 [Arabidopsis thaliana]
Length = 669
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 173/346 (50%), Positives = 236/346 (68%), Gaps = 29/346 (8%)
Query: 17 IDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISD 76
++ FP G+RVL VDDDPTCL +LE LR C YEVT N+A AL +LR+N++ FD+VISD
Sbjct: 30 VEMFPSGLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVISD 89
Query: 77 VHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIW 136
VHMPDMDGFKLLEHVGLEMDLPVIM+SA +V+KG+THGA DYL+KPVR+E LKNIW
Sbjct: 90 VHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKNIW 149
Query: 137 QHVIRRKK--------VGPKDQNKLLNQENSRVG-----------AGEGGQGAMSTGNSD 177
QHV+R+++ G ++ Q+ R G A + +++ GN+
Sbjct: 150 QHVVRKRRSEWSVPEHSGSIEETGERQQQQHRGGGGGAAVSGGEDAVDDNSSSVNEGNNW 209
Query: 178 QNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKA 237
++ S+RKRKD++G +E GDD ++ED++ KKPRVVW+ ELH++FV AVNQLGV+KA
Sbjct: 210 RS--SSRKRKDEEG--EEQGDD---KDEDASNLKKPRVVWSVELHQQFVAAVNQLGVEKA 262
Query: 238 VPKKILDLMNVEGLTRENVASHLQKFRLYLKRLSNETPQAGMV--AALGSKDSSYLRIGA 295
VPKKIL+LMNV GLTRENVASHLQK+R+YL+RL + G + + + +D+S+ +
Sbjct: 263 VPKKILELMNVPGLTRENVASHLQKYRIYLRRLGGVSQHQGNLNNSFMTGQDASFGPLST 322
Query: 296 LDGFGDLRSLNSPGRLSSSAISSSYVPGNMFGRFNSTSGLSMHGIA 341
L+GF DL++L G+L + +++ G S SGL + I
Sbjct: 323 LNGF-DLQALAVTGQLPAQSLAQLQAAGLGRPAMVSKSGLPVSSIV 367
>gi|162460014|ref|NP_001104861.1| response regulator 8 [Zea mays]
gi|13661174|dbj|BAB41137.1| response regulator 8 [Zea mays]
gi|195656391|gb|ACG47663.1| two-component response regulator ARR1 [Zea mays]
Length = 684
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 173/332 (52%), Positives = 225/332 (67%), Gaps = 35/332 (10%)
Query: 20 FPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM 79
FP+GM+VL VDDDPTCL VL+ L C+Y+VT QA AL MLRENR FD++ISDVHM
Sbjct: 11 FPVGMKVLVVDDDPTCLVVLKRMLLECRYDVTTCPQATRALTMLRENRRGFDVIISDVHM 70
Query: 80 PDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
PDMDGF+LLE VGLEMDLPVIM+SA T +VMKGI HGACDYL+KPVR+EELKNIWQHV
Sbjct: 71 PDMDGFRLLELVGLEMDLPVIMMSADSRTDIVMKGIKHGACDYLIKPVRMEELKNIWQHV 130
Query: 140 IRRKKVGPK-----------DQNKLLNQENSRV-GAGEGGQGAMSTGNSDQNGKSNRKRK 187
+R+K G K D+N+ N +N A +GG G+ KS +K++
Sbjct: 131 VRKKFNGNKDHEHSGSLDDTDRNRPTNNDNEYASSANDGGDGSW---------KSQKKKR 181
Query: 188 DQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMN 247
+++ DE + E+ D +T KKPRVVW+ ELH++FV AVN LG+DKAVPKKIL+LMN
Sbjct: 182 EKEDDETD------LESGDPSTSKKPRVVWSVELHQQFVNAVNHLGIDKAVPKKILELMN 235
Query: 248 VEGLTRENVASHLQKFRLYLKRLSNETPQAGMVAALGSKDSSYLRIGALDGFGDLRSLNS 307
V GLTRENVASHLQKFRLYLKR++ AG+ + SS ++ L G + ++L +
Sbjct: 236 VPGLTRENVASHLQKFRLYLKRIAQH--HAGIPHPFVASASSA-KVAPLGGL-EFQALAA 291
Query: 308 PGRLSSSAISSSYVPGNMFGRFNSTSGLSMHG 339
G++ A+++ + + GR TS L++ G
Sbjct: 292 SGQIPPQALAA--LQDELLGR--PTSSLALPG 319
>gi|4210449|dbj|BAA74528.1| ARR1 protein [Arabidopsis thaliana]
Length = 669
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 173/346 (50%), Positives = 236/346 (68%), Gaps = 29/346 (8%)
Query: 17 IDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISD 76
++ FP G+RVL VDDDPTCL +LE LR C YEVT N+A AL +LR+N++ FD+VISD
Sbjct: 30 VEMFPSGLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVISD 89
Query: 77 VHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIW 136
VHMPDMDGFKLLEHVGLEMDLPVIM+SA +V+KG+THGA DYL+KPVR+E LKNIW
Sbjct: 90 VHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKNIW 149
Query: 137 QHVIRRKK--------VGPKDQNKLLNQENSRVG-----------AGEGGQGAMSTGNSD 177
QHV+R+++ G ++ Q+ R G A + +++ GN+
Sbjct: 150 QHVVRKRRSEWSVPEHSGSIEETGERQQQQHRGGGGGAAVSGGEDAVDDNSSSVNEGNNW 209
Query: 178 QNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKA 237
++ S+RKRKD++G +E GDD ++ED++ KKPRVVW+ ELH++FV AVNQLGV+KA
Sbjct: 210 RS--SSRKRKDEEG--EEQGDD---KDEDASNLKKPRVVWSVELHQQFVAAVNQLGVEKA 262
Query: 238 VPKKILDLMNVEGLTRENVASHLQKFRLYLKRLSNETPQAGMV--AALGSKDSSYLRIGA 295
VPKKIL+LMNV GLTRENVASHLQK+R+YL+RL + G + + + +D+S+ +
Sbjct: 263 VPKKILELMNVPGLTRENVASHLQKYRIYLRRLGGVSQHQGNLNNSFMTGQDASFGPLST 322
Query: 296 LDGFGDLRSLNSPGRLSSSAISSSYVPGNMFGRFNSTSGLSMHGIA 341
L+GF DL++L G+L + +++ G S SGL + I
Sbjct: 323 LNGF-DLQALAVTGQLPAQSLAQLQAAGLGRPAMVSKSGLPVSSIV 367
>gi|15810171|gb|AAL06987.1| AT3g16857/MUH15_1 [Arabidopsis thaliana]
Length = 690
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 173/346 (50%), Positives = 236/346 (68%), Gaps = 29/346 (8%)
Query: 17 IDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISD 76
++ FP G+RVL VDDDPTCL +LE LR C YEVT N+A AL +LR+N++ FD+VISD
Sbjct: 30 VEMFPSGLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVISD 89
Query: 77 VHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIW 136
VHMPDMDGFKLLEHVGLEMDLPVIM+SA +V+KG+THGA DYL+KPVR+E LKNIW
Sbjct: 90 VHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKNIW 149
Query: 137 QHVIRRKK--------VGPKDQNKLLNQENSRVG-----------AGEGGQGAMSTGNSD 177
QHV+R+++ G ++ Q+ R G A + +++ GN+
Sbjct: 150 QHVVRKRRSEWSVPEHSGSIEETGERQQQQHRGGGGGAAVSGGEDAVDDNSSSVNEGNNW 209
Query: 178 QNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKA 237
++ S+RKRKD++G +E GDD ++ED++ KKPRVVW+ ELH++FV AVNQLGV+KA
Sbjct: 210 RS--SSRKRKDEEG--EEQGDD---KDEDASNLKKPRVVWSVELHQQFVAAVNQLGVEKA 262
Query: 238 VPKKILDLMNVEGLTRENVASHLQKFRLYLKRLSNETPQAGMV--AALGSKDSSYLRIGA 295
VPKKIL+LMNV GLTRENVASHLQK+R+YL+RL + G + + + +D+S+ +
Sbjct: 263 VPKKILELMNVPGLTRENVASHLQKYRIYLRRLGGVSQHQGNLNNSFMTGQDASFGPLST 322
Query: 296 LDGFGDLRSLNSPGRLSSSAISSSYVPGNMFGRFNSTSGLSMHGIA 341
L+GF DL++L G+L + +++ G S SGL + I
Sbjct: 323 LNGF-DLQALAVTGQLPAQSLAQLQAAGLGRPAMVSKSGLPVSSIV 367
>gi|414865594|tpg|DAA44151.1| TPA: putative two-component response regulator family protein
isoform 1 [Zea mays]
gi|414865595|tpg|DAA44152.1| TPA: putative two-component response regulator family protein
isoform 2 [Zea mays]
gi|414865596|tpg|DAA44153.1| TPA: putative two-component response regulator family protein
isoform 3 [Zea mays]
Length = 684
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 173/332 (52%), Positives = 225/332 (67%), Gaps = 35/332 (10%)
Query: 20 FPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM 79
FP+GM+VL VDDDPTCL VL+ L C+Y+VT QA AL MLRENR FD++ISDVHM
Sbjct: 11 FPVGMKVLVVDDDPTCLVVLKRMLLECRYDVTTCPQATRALTMLRENRRGFDVIISDVHM 70
Query: 80 PDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
PDMDGF+LLE VGLEMDLPVIM+SA T +VMKGI HGACDYL+KPVR+EELKNIWQHV
Sbjct: 71 PDMDGFRLLELVGLEMDLPVIMMSADSRTDIVMKGIKHGACDYLIKPVRMEELKNIWQHV 130
Query: 140 IRRKKVGPK-----------DQNKLLNQENSRV-GAGEGGQGAMSTGNSDQNGKSNRKRK 187
+R+K G K D+N+ N +N A +GG G+ KS +K++
Sbjct: 131 VRKKFNGNKDHEHSGSLDDTDRNRPTNNDNEYASSANDGGDGSW---------KSQKKKR 181
Query: 188 DQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMN 247
+++ DE + E+ D +T KKPRVVW+ ELH++FV AVN LG+DKAVPKKIL+LMN
Sbjct: 182 EKEDDETD------LESGDPSTSKKPRVVWSVELHQQFVNAVNHLGIDKAVPKKILELMN 235
Query: 248 VEGLTRENVASHLQKFRLYLKRLSNETPQAGMVAALGSKDSSYLRIGALDGFGDLRSLNS 307
V GLTRENVASHLQKFRLYLKR++ AG+ + SS ++ L G + ++L +
Sbjct: 236 VPGLTRENVASHLQKFRLYLKRIAQH--HAGIPHPFVASASSA-KVAPLGGL-EFQALAA 291
Query: 308 PGRLSSSAISSSYVPGNMFGRFNSTSGLSMHG 339
G++ A+++ + + GR TS L++ G
Sbjct: 292 SGQIPPQALAA--LQDELLGR--PTSSLALPG 319
>gi|42564262|ref|NP_566561.2| two-component response regulator ARR1 [Arabidopsis thaliana]
gi|50400604|sp|Q940D0.2|ARR1_ARATH RecName: Full=Two-component response regulator ARR1
gi|11994744|dbj|BAB03073.1| ARR1 protein [Arabidopsis thaliana]
gi|51971120|dbj|BAD44252.1| putative ARR1 protein [Arabidopsis thaliana]
gi|332642355|gb|AEE75876.1| two-component response regulator ARR1 [Arabidopsis thaliana]
Length = 690
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 173/346 (50%), Positives = 236/346 (68%), Gaps = 29/346 (8%)
Query: 17 IDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISD 76
++ FP G+RVL VDDDPTCL +LE LR C YEVT N+A AL +LR+N++ FD+VISD
Sbjct: 30 VEMFPSGLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVISD 89
Query: 77 VHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIW 136
VHMPDMDGFKLLEHVGLEMDLPVIM+SA +V+KG+THGA DYL+KPVR+E LKNIW
Sbjct: 90 VHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKNIW 149
Query: 137 QHVIRRKK--------VGPKDQNKLLNQENSRVG-----------AGEGGQGAMSTGNSD 177
QHV+R+++ G ++ Q+ R G A + +++ GN+
Sbjct: 150 QHVVRKRRSEWSVPEHSGSIEETGERQQQQHRGGGGGAAVSGGEDAVDDNSSSVNEGNNW 209
Query: 178 QNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKA 237
++ S+RKRKD++G +E GDD ++ED++ KKPRVVW+ ELH++FV AVNQLGV+KA
Sbjct: 210 RS--SSRKRKDEEG--EEQGDD---KDEDASNLKKPRVVWSVELHQQFVAAVNQLGVEKA 262
Query: 238 VPKKILDLMNVEGLTRENVASHLQKFRLYLKRLSNETPQAGMV--AALGSKDSSYLRIGA 295
VPKKIL+LMNV GLTRENVASHLQK+R+YL+RL + G + + + +D+S+ +
Sbjct: 263 VPKKILELMNVPGLTRENVASHLQKYRIYLRRLGGVSQHQGNLNNSFMTGQDASFGPLST 322
Query: 296 LDGFGDLRSLNSPGRLSSSAISSSYVPGNMFGRFNSTSGLSMHGIA 341
L+GF DL++L G+L + +++ G S SGL + I
Sbjct: 323 LNGF-DLQALAVTGQLPAQSLAQLQAAGLGRPAMVSKSGLPVSSIV 367
>gi|224106962|ref|XP_002314325.1| type-b response regulator [Populus trichocarpa]
gi|222863365|gb|EEF00496.1| type-b response regulator [Populus trichocarpa]
Length = 634
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 185/389 (47%), Positives = 253/389 (65%), Gaps = 28/389 (7%)
Query: 9 SAGCEDGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRN 68
S G D+FP G+RVL VDDDPTCL +LE LR C YEVT N+A AL +LRENRN
Sbjct: 12 STASSGGVSDQFPAGLRVLVVDDDPTCLVILEKMLRTCLYEVTKCNRAEIALSLLRENRN 71
Query: 69 NFDLVISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVR 128
+D+VISDVHMPDMDGFKLLE +GLEMDLPVIM+SA +VMKG+THGACDYL+KP+R
Sbjct: 72 GYDIVISDVHMPDMDGFKLLELIGLEMDLPVIMMSADDGKNVVMKGVTHGACDYLIKPIR 131
Query: 129 IEELKNIWQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQ-----GAMSTGNSDQNGKSN 183
IE LKNIWQHV+R++K KD L Q S G+ Q S+ ++ + K++
Sbjct: 132 IEALKNIWQHVVRKRKNEWKD----LEQSGSVEEGGDRQQKQSEDADYSSSANEGSWKNS 187
Query: 184 RKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKIL 243
++RKD++ + D E +D++T KKPRVVW+ ELH++FV AV+QLG+DKAVPKKIL
Sbjct: 188 KRRKDEEEEAD--------ERDDTSTLKKPRVVWSVELHQQFVAAVHQLGIDKAVPKKIL 239
Query: 244 DLMNVEGLTRENVASHLQKFRLYLKRLSNETP-QAGMV-AALGSKDSSYLRIGALDGFGD 301
+LMNV GLTRENVASHLQK+RLYL+RLS + Q+GM + + ++++Y + +L+G D
Sbjct: 240 ELMNVPGLTRENVASHLQKYRLYLRRLSGVSQHQSGMGNSFINPQEATYGPLSSLNGL-D 298
Query: 302 LRSLNSPGRLSSSAISSSYVPGNMFGRFNSTSGLSMHGIASSGMIQPGHSQSFNTSFNTI 361
L++L + G++ + ++++ G GR + + M + + SF
Sbjct: 299 LQTLAAAGQIPAQSLATLQAAG--LGRSTAKPRMPMPIVDQRNLF------SFENPKLRF 350
Query: 362 GKIQQAMFPANRISNLFQGVRTSSELNQL 390
G+ QQ + NL G+ T+ E QL
Sbjct: 351 GEGQQQHLNNGKQINLLHGIPTTMEPKQL 379
>gi|326488979|dbj|BAJ98101.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 684
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 169/317 (53%), Positives = 215/317 (67%), Gaps = 28/317 (8%)
Query: 13 EDGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDL 72
E G D+FP+GM+VL VDDD TCL VL+ L C+Y+ T +QA AL MLRENR FD+
Sbjct: 6 EAGGGDQFPVGMKVLVVDDDQTCLAVLKRMLIQCRYDATTCSQATRALAMLRENRGAFDV 65
Query: 73 VISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEEL 132
+ISDVHMPDMDGF+LLE VGLEMDLPVIM+SA T LVMKGI HGACDYL+KPVR+EEL
Sbjct: 66 IISDVHMPDMDGFRLLELVGLEMDLPVIMMSADSRTDLVMKGIKHGACDYLIKPVRMEEL 125
Query: 133 KNIWQHVIRRKKVGPK-----------DQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGK 181
KNIWQHV+R+K G K D+N+ N +N + G ++ + K
Sbjct: 126 KNIWQHVVRKKFGGNKEHEHSGSLDDTDRNRPTNNDNEYASSANDG--------AEDSWK 177
Query: 182 SNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKK 241
S +K++D++ D+ E D S KKPRVVW+ ELH++FV AVN LG+DKAVPKK
Sbjct: 178 SQKKKRDKEEDDSELESGD-----PSNNSKKPRVVWSVELHQQFVNAVNHLGIDKAVPKK 232
Query: 242 ILDLMNVEGLTRENVASHLQKFRLYLKRLSNETPQAGMVAALGSKDSSYLRIGALDGFGD 301
IL+LMNV GLTRENVASHLQKFRLYLKR++ AGM G SS ++ +L G D
Sbjct: 233 ILELMNVPGLTRENVASHLQKFRLYLKRIAQH--HAGMGNPYGVPASSA-QVASLGGL-D 288
Query: 302 LRSLNSPGRLSSSAISS 318
++L + G++ A+++
Sbjct: 289 FQALAASGQIPPQALAA 305
>gi|242041701|ref|XP_002468245.1| hypothetical protein SORBIDRAFT_01g042400 [Sorghum bicolor]
gi|241922099|gb|EER95243.1| hypothetical protein SORBIDRAFT_01g042400 [Sorghum bicolor]
Length = 686
Score = 322 bits (824), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 175/345 (50%), Positives = 227/345 (65%), Gaps = 37/345 (10%)
Query: 7 MGSAGCEDGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLREN 66
M +A G+ FP+GM+VL VDDDPTCL VL+ L C+Y+VT QA AL MLREN
Sbjct: 1 MAAAEARGGE---FPVGMKVLVVDDDPTCLLVLKRMLLDCRYDVTTCPQATRALTMLREN 57
Query: 67 RNNFDLVISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKP 126
R FD++ISDVHMPDMDGF+LLE VGLEMDLPVIM+SA T +VMKGI HGACDYL+KP
Sbjct: 58 RRGFDVIISDVHMPDMDGFRLLELVGLEMDLPVIMMSADSRTDIVMKGIKHGACDYLIKP 117
Query: 127 VRIEELKNIWQHVIRRK-----------KVGPKDQNKLLNQENSRV-GAGEGGQGAMSTG 174
VR+EELKNIWQHV+R+K + D+N+ N +N A +GG G+
Sbjct: 118 VRMEELKNIWQHVVRKKFNENKDHEHSGSLDDTDRNRPTNNDNEYASSANDGGDGSW--- 174
Query: 175 NSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGV 234
KS +K++ E ED + D + S+T KKPRVVW+ ELH++FV AVN LG+
Sbjct: 175 ------KSQKKKR-----EKEDDETDLENGDPSSTSKKPRVVWSVELHQQFVNAVNHLGI 223
Query: 235 DKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKRLSNETPQAGMVAALGSKDSSYLRIG 294
DKAVPKKIL+LMNV GLTRENVASHLQKFRLYLKR++ AG+ + SS ++
Sbjct: 224 DKAVPKKILELMNVPGLTRENVASHLQKFRLYLKRIAQH--HAGIPHPFVAPASSA-KVA 280
Query: 295 ALDGFGDLRSLNSPGRLSSSAISSSYVPGNMFGRFNSTSGLSMHG 339
L G + ++L + G++ A+++ + + GR TS L++ G
Sbjct: 281 PLGGL-EFQALAASGQIPPQALAA--LQDELLGR--PTSSLALPG 320
>gi|51968898|dbj|BAD43141.1| hypothetical protein [Arabidopsis thaliana]
Length = 664
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 169/320 (52%), Positives = 218/320 (68%), Gaps = 39/320 (12%)
Query: 18 DKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDV 77
D FP +RVL VD DPTCL +LE L C Y VT N+A +AL +LR+N+N FD+VISDV
Sbjct: 22 DPFPANLRVLVVDGDPTCLMILERMLMTCLYRVTKCNRAESALSLLRKNKNGFDIVISDV 81
Query: 78 HMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQ 137
HMPDMDGFKLLEHVGLEMDLPVIM+SA +V+KG+THGA DYL+KPVRIE LKNIWQ
Sbjct: 82 HMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRIEALKNIWQ 141
Query: 138 HVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQ------------------N 179
HV+R+K+ N+ N V GG + G+ D+ N
Sbjct: 142 HVVRKKR----------NEWN--VSEHSGGSIEDTGGDRDRQQQHREDADNNSSSVNEGN 189
Query: 180 GKSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVP 239
G+S+RKRK +E+ DD G + EDS++ KKPRVVW+ ELH++FV AVNQLGVDKAVP
Sbjct: 190 GRSSRKRK------EEEVDDQGDDKEDSSSLKKPRVVWSVELHQQFVAAVNQLGVDKAVP 243
Query: 240 KKILDLMNVEGLTRENVASHLQKFRLYLKRLSNETPQAGMV--AALGSKDSSYLRIGALD 297
KKIL++MNV GLTRENVASHLQK+R+YL+RL + G + + + +D S+ + +L+
Sbjct: 244 KKILEMMNVPGLTRENVASHLQKYRIYLRRLGGVSQHQGNMNHSFMTGQDQSFGPLSSLN 303
Query: 298 GFGDLRSLNSPGRLSSSAIS 317
GF DL+SL G+L +++
Sbjct: 304 GF-DLQSLAVTGQLPPQSLA 322
>gi|357113330|ref|XP_003558456.1| PREDICTED: uncharacterized protein LOC100821963 [Brachypodium
distachyon]
Length = 677
Score = 321 bits (822), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 173/355 (48%), Positives = 229/355 (64%), Gaps = 42/355 (11%)
Query: 10 AGCEDGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNN 69
A E+ +FP+GM+VL VDDDPTCL VL+ L C+Y+ T +Q+ AL MLRENR
Sbjct: 2 APPEEAGGGEFPVGMKVLVVDDDPTCLAVLKQMLVQCRYDATTCSQSTRALSMLRENRRG 61
Query: 70 FDLVISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRI 129
FD++ISDVHMPDMDGF+LLE VGLEMDLPVIM+SA T +VMKGI HGACDYL+KPVR+
Sbjct: 62 FDVIISDVHMPDMDGFRLLELVGLEMDLPVIMMSADSRTDIVMKGIKHGACDYLIKPVRM 121
Query: 130 EELKNIWQHVIRRKKVGPK-----------DQNKLLNQENSRVGAGEGGQGAMSTGNSDQ 178
EELKNIWQHV+R+K G K D+N+ N +N + G +D
Sbjct: 122 EELKNIWQHVVRKKFSGNKEHEHSGSLDDTDRNRPANNDNEYASSINDG--------ADD 173
Query: 179 NGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAV 238
+ KS +K++D++ D+ E D S + KKPRVVW+ ELH++FV AVN LG+DKAV
Sbjct: 174 SWKSQKKKRDKEEDDSELESGD-----PSNSSKKPRVVWSVELHQQFVNAVNHLGIDKAV 228
Query: 239 PKKILDLMNVEGLTRENVASHLQKFRLYLKRLSNETPQAGMVAALGSKDSSYLRIGALDG 298
PKKIL+LMNV GLTRENVASHLQKFRLYLKR++ AG+ + SS ++ +L G
Sbjct: 229 PKKILELMNVPGLTRENVASHLQKFRLYLKRIAQH--HAGITNPYCTPASSA-QVASLGG 285
Query: 299 FGDLRSLNSPGRLSSSAISSSYVPGNMFGRFNSTSGLSMHGIASSGMIQPGHSQS 353
D ++L + G++ A+++ + + GR ++ M+ PG QS
Sbjct: 286 L-DFQALAASGQIPPQALAA--LQDELLGR------------TTTSMVLPGRDQS 325
>gi|343407542|gb|AEM23772.1| RRB2 type-b response regulator [Nicotiana tabacum]
Length = 669
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 186/398 (46%), Positives = 257/398 (64%), Gaps = 28/398 (7%)
Query: 9 SAGCEDGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRN 68
S + D ++FP G+RVL VDDDPTCL++LE L C YEVT +N+A +AL +LRENRN
Sbjct: 18 SVSWKSNDNNQFPAGLRVLVVDDDPTCLRILEKMLWNCHYEVTKSNRAESALSLLRENRN 77
Query: 69 NFDLVISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVR 128
FD+VISDVHMPDMDGFKLLEHVGLEMDLPVIM+SA +VMKG+THGACDYL+KPVR
Sbjct: 78 GFDIVISDVHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKDVVMKGVTHGACDYLIKPVR 137
Query: 129 IEELKNIWQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGA------MSTGNSDQNGKS 182
IE LKNIWQHVIR+KK KD++ +++ AG+ Q S+ N N KS
Sbjct: 138 IEALKNIWQHVIRKKKHEWKDKDF---DQSATAEAGDRQQKPPEDVDYSSSANEGGNWKS 194
Query: 183 NRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKI 242
+++RK+++ + + E +DS++ KKPRVVW+ ELH++FV AVNQLG+DKAVPKKI
Sbjct: 195 SKRRKEEEDETE--------ERDDSSSLKKPRVVWSVELHQQFVQAVNQLGIDKAVPKKI 246
Query: 243 LDLMNVEGLTRENVASHLQKFRLYLKRLS--NETPQAGMVAALGSKDSSYLRIGALDGFG 300
L+LMNV GLTRENVASHLQK+RLYL+RLS ++ P + +G +S+ + G
Sbjct: 247 LELMNVPGLTRENVASHLQKYRLYLRRLSGVSQHPNGLNNSFMGHPESNIWNVFFSMGL- 305
Query: 301 DLRSLNSPGRLSSSAISSSYVPGNMFGRFNSTSGLSMHGIASSGMIQPGHSQSFNTSFNT 360
++L + +L + ++++ + GR + + +SM + + SF
Sbjct: 306 SFQALAATSQLPAQSLAT--LQAAALGRSATKAAISMPLVDQRNLF------SFENPKLR 357
Query: 361 IGKIQQAMFPANRISNLFQGVRTSSELNQLPQSKSTTQ 398
+ QQ + +N+ NL G+ T+ E QL ++Q
Sbjct: 358 FPEGQQQLNNSNKQINLLHGIPTTMEPKQLADLHQSSQ 395
>gi|223942343|gb|ACN25255.1| unknown [Zea mays]
gi|323388571|gb|ADX60090.1| ARR-B family member [Zea mays]
gi|323388695|gb|ADX60152.1| ARR-B transcription factor [Zea mays]
gi|413956503|gb|AFW89152.1| putative two-component response regulator family protein isoform 1
[Zea mays]
gi|413956504|gb|AFW89153.1| putative two-component response regulator family protein isoform 2
[Zea mays]
Length = 686
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 176/345 (51%), Positives = 225/345 (65%), Gaps = 37/345 (10%)
Query: 7 MGSAGCEDGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLREN 66
M +A G+ FP+GM+VL VDDDPTCL VL+ L C+Y+VT QA AL MLREN
Sbjct: 1 MAAAKARGGE---FPVGMKVLVVDDDPTCLVVLKRMLLECRYDVTTCPQATRALTMLREN 57
Query: 67 RNNFDLVISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKP 126
R FD++ISDVHMPDMDGF+LLE VGLEMDLPVIM+SA T +VM GI HGACDYL+KP
Sbjct: 58 RRGFDVIISDVHMPDMDGFRLLELVGLEMDLPVIMMSADSRTDIVMNGIKHGACDYLIKP 117
Query: 127 VRIEELKNIWQHVIRRK-----------KVGPKDQNKLLNQENSRV-GAGEGGQGAMSTG 174
VR+EELKNIWQHVIR+K + D+N+ N +N A +GG G+
Sbjct: 118 VRMEELKNIWQHVIRKKFNENKDHEHSGSLDDTDRNRPTNNDNEYASSANDGGDGSW--- 174
Query: 175 NSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGV 234
KS RK++ E ED + D + S+T KKPRVVW+ ELH++FV AVN LG+
Sbjct: 175 ------KSQRKKR-----EKEDDETDLENGDPSSTSKKPRVVWSVELHQQFVNAVNHLGI 223
Query: 235 DKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKRLSNETPQAGMVAALGSKDSSYLRIG 294
DKAVPKKIL+LMNV GLTRENVASHLQKFRLYLKR++ AG+ + SS +
Sbjct: 224 DKAVPKKILELMNVPGLTRENVASHLQKFRLYLKRIAQH--HAGIPHPFVAPVSSA-NVA 280
Query: 295 ALDGFGDLRSLNSPGRLSSSAISSSYVPGNMFGRFNSTSGLSMHG 339
L G + ++L + G++ A+++ + + GR TS L++ G
Sbjct: 281 PLGGL-EFQALAASGQIPPQALAA--LQDELLGR--PTSSLALPG 320
>gi|298103718|emb|CBM42560.1| putative B-type response regulator 15 [Populus x canadensis]
Length = 671
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 181/386 (46%), Positives = 235/386 (60%), Gaps = 20/386 (5%)
Query: 2 TAEERMGSAGCEDGDI---DKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVT 58
T+ GS D+ D+FP G+RVL VDDD TCL++LE R C Y VT +QA
Sbjct: 13 TSASTYGSCKGAGADVIVSDQFPAGLRVLVVDDDITCLRLLEKMPRRCLYHVTTCSQATA 72
Query: 59 ALKMLRENRNNFDLVISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHG 118
ALK+LRE + FD+V+SDVHMPDMDGFKLLE VGLEMDLPVIM+SA G T VM+GI+HG
Sbjct: 73 ALKLLRERKGCFDVVLSDVHMPDMDGFKLLELVGLEMDLPVIMMSADGRTSAVMRGISHG 132
Query: 119 ACDYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLN-QENSRVGAGEGGQGAMSTGNSD 177
ACDYL+KP+R EELKNIWQHVIR+K K+Q + ++N R G + A S
Sbjct: 133 ACDYLIKPIREEELKNIWQHVIRKKWNENKEQEHSGSFEDNDRHKRGNDAENASSVSEGA 192
Query: 178 QNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKA 237
+ +K++ DE DD EN+D + +KPRVVW+ ELH++FV AVN LG+DKA
Sbjct: 193 EGVLKGQKKRSIAKDE----DDAELENDDPSASRKPRVVWSVELHQQFVSAVNHLGIDKA 248
Query: 238 VPKKILDLMNVEGLTRENVASHLQKFRLYLKRLSNETPQAGMVAALGSKDSSYLRIGALD 297
VPK+IL+LMNV GLTRENVASHLQKFRLYLKRLS Q G+ S +++ L
Sbjct: 249 VPKRILELMNVPGLTRENVASHLQKFRLYLKRLSGVAQQGGISNPFCGLLDSNVKLNPLG 308
Query: 298 GFGDLRSLNSPGRLSSSAISSSYVP--GNMFGRFNST---SGLSMHGIASSGMIQPGHSQ 352
F D++ L + G++ +++ + G+ G +T L + I H
Sbjct: 309 RF-DIQVLAASGQIPPQTLAAPHAELFGHPAGGMVTTVDQPALLQASVQGPKCIPAEHGM 367
Query: 353 SFNTSFNTIGKIQQAM---FPANRIS 375
+F +GK Q M FP N +S
Sbjct: 368 AFG---QPLGKCQTNMSKHFPQNVVS 390
>gi|162460694|ref|NP_001104864.1| response regulator 10 [Zea mays]
gi|15667625|dbj|BAB68269.1| response regulator 10 [Zea mays]
Length = 686
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 175/345 (50%), Positives = 225/345 (65%), Gaps = 37/345 (10%)
Query: 7 MGSAGCEDGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLREN 66
M +A G+ FP+GM+VL VDDDPTCL VL+ L C+Y+VT QA AL MLREN
Sbjct: 1 MAAAEARGGE---FPVGMKVLVVDDDPTCLVVLKRMLLECRYDVTTCPQATRALTMLREN 57
Query: 67 RNNFDLVISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKP 126
R FD++ISDVHMPDMDGF+LLE VGLEMDLPVIM+SA T +VM G+ HGACDYL+KP
Sbjct: 58 RRGFDVIISDVHMPDMDGFRLLELVGLEMDLPVIMMSADSRTDIVMNGVKHGACDYLIKP 117
Query: 127 VRIEELKNIWQHVIRRK-----------KVGPKDQNKLLNQENSRV-GAGEGGQGAMSTG 174
VR+EELKNIWQHVIR+K + D+N+ N +N A +GG G+
Sbjct: 118 VRMEELKNIWQHVIRKKFNENKDHEHSGSLDDTDRNRPTNNDNEYASSANDGGDGSW--- 174
Query: 175 NSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGV 234
KS RK++ E ED + D + S+T KKPRVVW+ ELH++FV AVN LG+
Sbjct: 175 ------KSQRKKR-----EKEDDETDLENGDPSSTSKKPRVVWSVELHQQFVNAVNHLGI 223
Query: 235 DKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKRLSNETPQAGMVAALGSKDSSYLRIG 294
DKAVPKKIL+LMNV GLTRENVASHLQKFRLYLKR++ AG+ + SS +
Sbjct: 224 DKAVPKKILELMNVPGLTRENVASHLQKFRLYLKRIAQH--HAGIPHPFVAPVSSA-NVA 280
Query: 295 ALDGFGDLRSLNSPGRLSSSAISSSYVPGNMFGRFNSTSGLSMHG 339
L G + ++L + G++ A+++ + + GR TS L++ G
Sbjct: 281 PLGGL-EFQALAASGQIPPQALAA--LQDELLGR--PTSSLALPG 320
>gi|109631196|gb|ABG35774.1| SRR384 [Striga asiatica]
Length = 569
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 163/295 (55%), Positives = 215/295 (72%), Gaps = 12/295 (4%)
Query: 18 DKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDV 77
D+FP G+RVL VDDDPTCL++LE L+ C YEVT N+A ALK LR+ RN +D+VISDV
Sbjct: 25 DQFPAGLRVLVVDDDPTCLRILEKMLKNCLYEVTTCNRAGIALKFLRDKRNVYDIVISDV 84
Query: 78 HMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQ 137
HMPDMDGFKLLEHVGLEMDLPV M+SA +VMKG+THGACDYL+KP+R+E LKNIWQ
Sbjct: 85 HMPDMDGFKLLEHVGLEMDLPVTMMSADDSKNVVMKGVTHGACDYLIKPIRMEALKNIWQ 144
Query: 138 HVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGA-MSTGNSDQNGKSNRKRKDQDGDEDED 196
H++R+++ K+++ L+Q V + + S S++N +++KRKD+ EDE
Sbjct: 145 HLVRKRQHEWKEKD--LDQHLGSVDEQKLPEDLDYSLSVSEENWNTSKKRKDE---EDEA 199
Query: 197 GDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENV 256
D D D+++ KKPRVVW+ ELH++FV AVNQLG+DKAVPKKIL+LMNV GL+RENV
Sbjct: 200 VDKD-----DTSSLKKPRVVWSVELHQQFVAAVNQLGIDKAVPKKILELMNVPGLSRENV 254
Query: 257 ASHLQKFRLYLKRLSNETPQAGMVAALGSKDSSYLRIGALDGFGDLRSLNSPGRL 311
ASHLQK+RLYL+RLS++ +G DS + + L DL++L + G+L
Sbjct: 255 ASHLQKYRLYLRRLSSQHHNGLPNPFMGLPDSPFGPMTQLSAV-DLQALAASGQL 308
>gi|297830298|ref|XP_002883031.1| hypothetical protein ARALYDRAFT_479152 [Arabidopsis lyrata subsp.
lyrata]
gi|297328871|gb|EFH59290.1| hypothetical protein ARALYDRAFT_479152 [Arabidopsis lyrata subsp.
lyrata]
Length = 687
Score = 317 bits (813), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 172/346 (49%), Positives = 235/346 (67%), Gaps = 30/346 (8%)
Query: 17 IDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISD 76
++ FP G+RVL VDDDPTCL +LE LR C YEVT N+A AL +LR+N++ FD+VISD
Sbjct: 28 VEMFPSGLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVISD 87
Query: 77 VHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIW 136
VHMPDMDGFKLLEHVGLEMDLPVIM+SA +V+KG+THGA DYL+KPVR+E LKNIW
Sbjct: 88 VHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKNIW 147
Query: 137 QHVIRRKK--------VGPKDQNKLLNQENSRVG-----------AGEGGQGAMSTGNSD 177
QHV+R+++ G ++ Q+ R G A + +++ GN+
Sbjct: 148 QHVVRKRRSEWSVPEHSGSIEETGERQQQQHRGGGGGAAVSGGEDAVDDNSSSVNEGNNW 207
Query: 178 QNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKA 237
++ S+RKRKD++G +E GDD ++ED++ KKPRVVW+ ELH++FV AVNQLG + A
Sbjct: 208 RS--SSRKRKDEEG--EEQGDD---KDEDASNLKKPRVVWSVELHQQFVAAVNQLGAE-A 259
Query: 238 VPKKILDLMNVEGLTRENVASHLQKFRLYLKRLSNETPQAGMV--AALGSKDSSYLRIGA 295
VPKKIL+LMNV GLTRENVASHLQK+R+YL+RL + G + + + +D+S+ +
Sbjct: 260 VPKKILELMNVPGLTRENVASHLQKYRIYLRRLGGVSQHQGNLNNSFMTGQDASFGPLST 319
Query: 296 LDGFGDLRSLNSPGRLSSSAISSSYVPGNMFGRFNSTSGLSMHGIA 341
L+GF DL++L G+L + +++ V G S SGL + I
Sbjct: 320 LNGF-DLQALAVTGQLPAQSLAQLQVAGLGRPAMVSKSGLPVSSIV 364
>gi|224099559|ref|XP_002311532.1| type-b response regulator [Populus trichocarpa]
gi|222851352|gb|EEE88899.1| type-b response regulator [Populus trichocarpa]
Length = 303
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 164/304 (53%), Positives = 209/304 (68%), Gaps = 6/304 (1%)
Query: 18 DKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDV 77
D+FP G+RVL VDDD TCL++LE LR C Y VT +QA ALK+LRE + FD+V+SDV
Sbjct: 3 DQFPAGLRVLVVDDDITCLRLLEKMLRRCLYHVTTCSQATAALKLLRERKGCFDVVLSDV 62
Query: 78 HMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQ 137
HMPDMDGFKLLE VGLEMDLPVIM+SA G T VM+GI+HGACDYL+KP+R EELKNIWQ
Sbjct: 63 HMPDMDGFKLLELVGLEMDLPVIMMSADGRTSAVMRGISHGACDYLIKPIREEELKNIWQ 122
Query: 138 HVIRRKKVGPKDQNKLLN-QENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDED 196
HVIR+K K+Q + ++N R G + A S + +K++ DE
Sbjct: 123 HVIRKKWNENKEQEHSGSFEDNDRHKRGNDAENASSVSEGAEGVLKGQKKRSIAKDE--- 179
Query: 197 GDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENV 256
DD EN+D + KKPRVVW+ ELH++FV AVN LG+DKAVPK+IL+LMNV GLTRENV
Sbjct: 180 -DDAELENDDPSASKKPRVVWSVELHQQFVSAVNHLGIDKAVPKRILELMNVPGLTRENV 238
Query: 257 ASHLQKFRLYLKRLSNETPQAGMVAALGSKDSSYLRIGALDGFGDLRSLNSPGRLSSSAI 316
ASHLQKFRLYLKRLS Q G+ S +++ L F D++ L + G++ +
Sbjct: 239 ASHLQKFRLYLKRLSGVAQQGGISNPFCGLLDSNVKLNPLGRF-DIQVLAASGQIPPQTL 297
Query: 317 SSSY 320
++ +
Sbjct: 298 AALH 301
>gi|297804596|ref|XP_002870182.1| hypothetical protein ARALYDRAFT_915160 [Arabidopsis lyrata subsp.
lyrata]
gi|297316018|gb|EFH46441.1| hypothetical protein ARALYDRAFT_915160 [Arabidopsis lyrata subsp.
lyrata]
Length = 676
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 185/402 (46%), Positives = 240/402 (59%), Gaps = 49/402 (12%)
Query: 18 DKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDV 77
D FP +RVL VDDDPTCL +LE L C Y VT N+A AL +LR+N+N FD+VISDV
Sbjct: 22 DPFPANLRVLVVDDDPTCLMILERMLMTCLYRVTKCNRAEIALSLLRKNKNGFDIVISDV 81
Query: 78 HMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQ 137
HMPDMDGFKLLEHVGLEMDLPVIM+SA +V+KG+THGA DYL+KPVRIE LKNIWQ
Sbjct: 82 HMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRIEALKNIWQ 141
Query: 138 HVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQ------------------N 179
HV+R+K+ D N V GG + G+ D+ N
Sbjct: 142 HVVRKKR---NDWN---------VSEHSGGSIEDTGGDRDRQQQQREDADNNSSSINEGN 189
Query: 180 GKSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVP 239
+S+RKRK++ + DE GDD ED+++ KKPRVVW+ ELH++FV AVNQLGVDKAVP
Sbjct: 190 WRSSRKRKEE--EVDEQGDD----KEDTSSLKKPRVVWSVELHQQFVAAVNQLGVDKAVP 243
Query: 240 KKILDLMNVEGLTRENVASHLQKFRLYLKRLSNETPQAGMV--AALGSKDSSYLRIGALD 297
KKIL++MNV GLTRENVASHLQK+R+YL+RL + G + + + +D S+ + +L+
Sbjct: 244 KKILEMMNVPGLTRENVASHLQKYRIYLRRLGGVSQHQGNMNHSFMTGQDQSFGHLSSLN 303
Query: 298 GFGDLRSLNSPGRLSSSAISSSYVPGNMFGRFNSTSGLSMHGIASSGMIQPGHSQSFNTS 357
GF L G+L + +++ G GR L+ G++ S ++ +F
Sbjct: 304 GF----DLAVAGQLPAQSLAQFQAAG--LGR----PTLTKPGLSVSPLVDQRTIFNFENP 353
Query: 358 FNTIGKIQQAMF-PANRISNLFQGVRTSSELNQLPQSKSTTQ 398
G M N+ NL GV T E Q S Q
Sbjct: 354 KIRFGDGHGPMMNNGNKQMNLLHGVPTGMEPKQFAGSHMRVQ 395
>gi|125542952|gb|EAY89091.1| hypothetical protein OsI_10579 [Oryza sativa Indica Group]
Length = 691
Score = 314 bits (805), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 170/321 (52%), Positives = 216/321 (67%), Gaps = 30/321 (9%)
Query: 10 AGCEDGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNN 69
A EDG +FP+GM+VL VDDDPTCL VL+ L C+Y+ T +QA AL MLRENR
Sbjct: 2 APVEDGGGVEFPVGMKVLVVDDDPTCLAVLKRMLLECRYDATTCSQATRALTMLRENRRG 61
Query: 70 FDLVISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRI 129
FD++ISDVHMPDMDGF+LLE VGLEMDLPVIM+SA T +VMKGI HGACDYL+KPVR+
Sbjct: 62 FDVIISDVHMPDMDGFRLLELVGLEMDLPVIMMSADSRTDIVMKGIKHGACDYLIKPVRM 121
Query: 130 EELKNIWQHVIRRK-----------KVGPKDQNKLLNQENSRV-GAGEGGQGAMSTGNSD 177
EELKNIWQHVIR+K + D+ + N +N A +G +G+ +
Sbjct: 122 EELKNIWQHVIRKKFNENKEHEHSGSLDDTDRTRPTNNDNEYASSANDGAEGSWKS---- 177
Query: 178 QNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKA 237
+ ++ KD D E E GD S+T KKPRVVW+ ELH++FV AVN LG+DKA
Sbjct: 178 ---QKKKRDKDDDDGELESGD-------PSSTSKKPRVVWSVELHQQFVNAVNHLGIDKA 227
Query: 238 VPKKILDLMNVEGLTRENVASHLQKFRLYLKRLSNETPQAGMVAALGSKDSSYLRIGALD 297
VPKKIL+LMNV GLTRENVASHLQKFRLYLKR++ AG+ SS ++G+L
Sbjct: 228 VPKKILELMNVPGLTRENVASHLQKFRLYLKRIAQH--HAGIANPFCPPASSG-KVGSLG 284
Query: 298 GFGDLRSLNSPGRLSSSAISS 318
G D ++L + G++ A+++
Sbjct: 285 GL-DFQALAASGQIPPQALAA 304
>gi|115451653|ref|NP_001049427.1| Os03g0224200 [Oryza sativa Japonica Group]
gi|24308616|gb|AAN52739.1| Putative response regulator 10 [Oryza sativa Japonica Group]
gi|108706930|gb|ABF94725.1| myb-like DNA-binding domain, SHAQKYF class family protein,
expressed [Oryza sativa Japonica Group]
gi|108706931|gb|ABF94726.1| myb-like DNA-binding domain, SHAQKYF class family protein,
expressed [Oryza sativa Japonica Group]
gi|108706932|gb|ABF94727.1| myb-like DNA-binding domain, SHAQKYF class family protein,
expressed [Oryza sativa Japonica Group]
gi|110331747|dbj|BAE97711.1| B-type response regulator [Oryza sativa Japonica Group]
gi|113547898|dbj|BAF11341.1| Os03g0224200 [Oryza sativa Japonica Group]
gi|118790738|tpd|FAA00254.1| TPA: response regulator [Oryza sativa Japonica Group]
gi|125585452|gb|EAZ26116.1| hypothetical protein OsJ_09978 [Oryza sativa Japonica Group]
gi|215767224|dbj|BAG99452.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767240|dbj|BAG99468.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 691
Score = 314 bits (805), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 170/321 (52%), Positives = 216/321 (67%), Gaps = 30/321 (9%)
Query: 10 AGCEDGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNN 69
A EDG +FP+GM+VL VDDDPTCL VL+ L C+Y+ T +QA AL MLRENR
Sbjct: 2 APVEDGGGVEFPVGMKVLVVDDDPTCLAVLKRMLLECRYDATTCSQATRALTMLRENRRG 61
Query: 70 FDLVISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRI 129
FD++ISDVHMPDMDGF+LLE VGLEMDLPVIM+SA T +VMKGI HGACDYL+KPVR+
Sbjct: 62 FDVIISDVHMPDMDGFRLLELVGLEMDLPVIMMSADSRTDIVMKGIKHGACDYLIKPVRM 121
Query: 130 EELKNIWQHVIRRK-----------KVGPKDQNKLLNQENSRV-GAGEGGQGAMSTGNSD 177
EELKNIWQHVIR+K + D+ + N +N A +G +G+ +
Sbjct: 122 EELKNIWQHVIRKKFNENKEHEHSGSLDDTDRTRPTNNDNEYASSANDGAEGSWKS---- 177
Query: 178 QNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKA 237
+ ++ KD D E E GD S+T KKPRVVW+ ELH++FV AVN LG+DKA
Sbjct: 178 ---QKKKRDKDDDDGELESGD-------PSSTSKKPRVVWSVELHQQFVNAVNHLGIDKA 227
Query: 238 VPKKILDLMNVEGLTRENVASHLQKFRLYLKRLSNETPQAGMVAALGSKDSSYLRIGALD 297
VPKKIL+LMNV GLTRENVASHLQKFRLYLKR++ AG+ SS ++G+L
Sbjct: 228 VPKKILELMNVPGLTRENVASHLQKFRLYLKRIAQH--HAGIANPFCPPASSG-KVGSLG 284
Query: 298 GFGDLRSLNSPGRLSSSAISS 318
G D ++L + G++ A+++
Sbjct: 285 GL-DFQALAASGQIPPQALAA 304
>gi|224111430|ref|XP_002315852.1| type-b response regulator [Populus trichocarpa]
gi|222864892|gb|EEF02023.1| type-b response regulator [Populus trichocarpa]
Length = 663
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 164/312 (52%), Positives = 210/312 (67%), Gaps = 7/312 (2%)
Query: 18 DKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDV 77
D+FP G+RVL VDDD TCL++LE L C Y VT +QA ALK+LRE + FD+V+SDV
Sbjct: 32 DQFPAGLRVLVVDDDITCLRLLEKMLCRCLYNVTTCSQATAALKLLRERKGCFDVVLSDV 91
Query: 78 HMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQ 137
HMPDMDGFKLLE VGLEMDLPVIM+SA G T VM+GI HGACDYL+KP+R EELKNIWQ
Sbjct: 92 HMPDMDGFKLLELVGLEMDLPVIMMSADGRTSAVMRGIRHGACDYLIKPIREEELKNIWQ 151
Query: 138 HVIRRKKVGPKDQNKLLN-QENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDED 196
HVIR+K K+Q + ++N G S+ N G ++K E+
Sbjct: 152 HVIRKKWNENKEQEHSGSFEDNDWYKRGNDDTENASSVNEGAEGVLKGQKKRNIAKEE-- 209
Query: 197 GDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENV 256
DD+ E +D + KKPRVVW+ ELH++FV AVNQLG+DKAVPK+IL+LMNV GLTRENV
Sbjct: 210 -DDNELEIDDPSASKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENV 268
Query: 257 ASHLQKFRLYLKRLSNETPQAGMVAALGSKDSSYLRIGALDGFGDLRSLNSPGRLSSSAI 316
ASHLQKFRLYLKRLS Q G+ S +++ L F D+++L + ++ +
Sbjct: 269 ASHLQKFRLYLKRLSGVAQQGGISNTFCGPLDSNVKVNPLGRF-DIQALAASSQIPPQTL 327
Query: 317 SSSYVPGNMFGR 328
++ + +FGR
Sbjct: 328 AALH--AELFGR 337
>gi|298103720|emb|CBM42561.1| putative B-type response regulator 16 [Populus x canadensis]
Length = 663
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 163/312 (52%), Positives = 210/312 (67%), Gaps = 7/312 (2%)
Query: 18 DKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDV 77
D+FP G+RVL VDDD TCL++LE L C Y VT +QA ALK+LRE + FD+V+SDV
Sbjct: 32 DQFPAGLRVLVVDDDITCLRLLEKMLCRCLYNVTTCSQATAALKLLRERKGCFDVVLSDV 91
Query: 78 HMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQ 137
HMPDMDGFKLLE VGLEMDLPVIM+SA G T VM+GI HGACDYL+KP+R EELKNIWQ
Sbjct: 92 HMPDMDGFKLLELVGLEMDLPVIMMSADGRTSAVMRGIKHGACDYLIKPIREEELKNIWQ 151
Query: 138 HVIRRKKVGPKDQNKLLN-QENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDED 196
HVIR+K K+Q + ++N G S+ N G ++K E+
Sbjct: 152 HVIRKKWNENKEQEHSGSFEDNDWYKRGNDDTENASSVNEGAEGVLKGQKKRNIAKEE-- 209
Query: 197 GDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENV 256
DD+ E +D + KKPRVVW+ ELH++FV AVNQLG+D+AVPK+IL+LMNV GLTRENV
Sbjct: 210 -DDNELEIDDPSASKKPRVVWSVELHQQFVSAVNQLGIDEAVPKRILELMNVPGLTRENV 268
Query: 257 ASHLQKFRLYLKRLSNETPQAGMVAALGSKDSSYLRIGALDGFGDLRSLNSPGRLSSSAI 316
ASHLQKFRLYLKRLS Q G+ S +++ L F D+++L + ++ +
Sbjct: 269 ASHLQKFRLYLKRLSGVAQQGGISNTFCGPLDSNVKVNPLGRF-DIQALAASSQIPPQTL 327
Query: 317 SSSYVPGNMFGR 328
++ + +FGR
Sbjct: 328 AALH--AELFGR 337
>gi|302788023|ref|XP_002975781.1| hypothetical protein SELMODRAFT_150746 [Selaginella moellendorffii]
gi|300156782|gb|EFJ23410.1| hypothetical protein SELMODRAFT_150746 [Selaginella moellendorffii]
Length = 660
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 166/325 (51%), Positives = 220/325 (67%), Gaps = 26/325 (8%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
MRVL VDDD T L +LE LR C+Y VT +A TAL +LRE++N+FDLVISDV+MPDMD
Sbjct: 1 MRVLVVDDDQTTLTILEAMLRRCRYNVTTCGKATTALALLREHKNDFDLVISDVYMPDMD 60
Query: 84 GFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRK 143
GFKLLE VGLEMDLPVIM+S GD VMKGITHGACDYLLKPVR+EEL+NIWQH++R++
Sbjct: 61 GFKLLELVGLEMDLPVIMMSTDGDYNNVMKGITHGACDYLLKPVRMEELRNIWQHLVRKR 120
Query: 144 KVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHE 203
K ++ L E ++ G G+ ++ S +K +D E+++G D H+
Sbjct: 121 KNEARETETLTPAEADKLKGG--------GGDDVEHLSSACSKKRKDVKEEDEGVD--HD 170
Query: 204 NEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKF 263
+ED ++ KKPRVVW+ ELH++FV AVN+L +DKAVPKKIL+LM+V GLTRENVASHLQK+
Sbjct: 171 SEDPSSLKKPRVVWSVELHQQFVNAVNKLNIDKAVPKKILELMDVPGLTRENVASHLQKY 230
Query: 264 RLYLKRLSNETPQAGMVAALGSKDSSYLRIGALDGFGDLRSLNSPGRLSSSAISSSYVPG 323
RLYLKR+S + PQ +S+ G +DG + R G S A+ + V
Sbjct: 231 RLYLKRISAQQPQ----------NSAGFSFGGVDGPAEGRGH---GSFSLQAVPA--VQQ 275
Query: 324 NMFGRFNSTSGL-SMHGIASSGMIQ 347
+ GR +T+ L + + SG++Q
Sbjct: 276 GVLGRIGTTNNLPASTALDQSGLLQ 300
>gi|357449081|ref|XP_003594816.1| Two-component response regulator ARR2 [Medicago truncatula]
gi|355483864|gb|AES65067.1| Two-component response regulator ARR2 [Medicago truncatula]
Length = 606
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 192/421 (45%), Positives = 262/421 (62%), Gaps = 46/421 (10%)
Query: 18 DKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDV 77
D+FP G+RVL VDDDPTCL +LE LR C YEVT +A AL +LREN+N FD+V+SDV
Sbjct: 27 DQFPAGLRVLVVDDDPTCLMILERMLRFCLYEVTKCKRAEVALSLLRENKNGFDIVLSDV 86
Query: 78 HMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQ 137
HMPDMDGFKLLEH+GLEMDLPVIM+SA +VMKG+THGACDYL+KPVRIE LKNIWQ
Sbjct: 87 HMPDMDGFKLLEHIGLEMDLPVIMMSADDGKNVVMKGVTHGACDYLIKPVRIEALKNIWQ 146
Query: 138 HVIRRKKVGPKD--QNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDE 195
HV+R++K KD Q+ L++ + A + ST GKS++KR+D++ + D
Sbjct: 147 HVVRKRKNSWKDLRQSGGLDERDREKKASTDANYSSST----NEGKSSKKRRDEEDEAD- 201
Query: 196 DGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTREN 255
+ +D +T KKPRVVW+ ELH++F+ VNQLG+DKAVPKKI+++MNV GLTREN
Sbjct: 202 -------DRDDCSTSKKPRVVWSIELHQQFMAVVNQLGLDKAVPKKIMEMMNVPGLTREN 254
Query: 256 VASHLQKFRLYLKRLSNET-PQAGMVAALGSKDSSYLRIGALDGFGDLRSLNSPGRLSSS 314
VASHLQK+RLYL+RLS + Q+ + + S S +++ DL++L++ G+ S+
Sbjct: 255 VASHLQKYRLYLRRLSGVSQQQSNLNNSFMSAQESIFGGTSVNEI-DLQTLSASGQFSAQ 313
Query: 315 AISS-----SYVPGNMFGRF---------NSTSGLSMHGIASSGMIQPGHSQSFNTSFNT 360
+++ Y P N RF +S +HGI + I+P +F+ S +
Sbjct: 314 SLAKLQAAGLYSPENSKLRFGDGQLQHMSSSKPVNFLHGIPIN--IEPKQFANFHQSAQS 371
Query: 361 IGKIQQAMFPANRISNLFQGVRTSSELNQLPQSKSTTQIGDFNHINS-----PTTSMAAT 415
G AN N + S L Q+ QS+ Q+ + N NS P++ M T
Sbjct: 372 FGS-------ANMRVNA-SAAKRSPWLTQMAQSQPRGQVLNEN-TNSHATMFPSSLMQPT 422
Query: 416 G 416
G
Sbjct: 423 G 423
>gi|255084361|ref|XP_002508755.1| g2-like myb-transcription factor with a n-terminal response
regulator receiver domain [Micromonas sp. RCC299]
gi|226524032|gb|ACO70013.1| g2-like myb-transcription factor with a n-terminal response
regulator receiver domain [Micromonas sp. RCC299]
Length = 488
Score = 308 bits (789), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 158/284 (55%), Positives = 197/284 (69%), Gaps = 44/284 (15%)
Query: 20 FPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM 79
FPIG+RVL VDDDP CLK++E L+ CQYEVT ++ ALK LRE +++FD+V+SDVHM
Sbjct: 10 FPIGLRVLVVDDDPLCLKIVEKMLKRCQYEVTTFSRGAEALKTLRERKDDFDIVLSDVHM 69
Query: 80 PDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
PDMDGFKLLEH+ LE+D+PV+M+SA T +V++GI HGA DYLLKPVRIEEL+NIWQHV
Sbjct: 70 PDMDGFKLLEHIALELDIPVMMMSANCATDVVLRGIIHGAVDYLLKPVRIEELRNIWQHV 129
Query: 140 IRRKKVGPKDQNKLLNQENSRVGAGEGGQGAM--------------STGNSDQNGKSNRK 185
+RRK+ +Q N R +GEGG S G+S+Q+G + K
Sbjct: 130 VRRKRES--------SQGNLR--SGEGGSNGRTVSGGSTGEGGGKDSKGSSEQHGDAKDK 179
Query: 186 -------------------RKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFV 226
+ D+ DE +DG G ENEDS+ KKPRVVW+ ELH++FV
Sbjct: 180 TGSAGGSGGSSKRKKGSGKKGDEGTDEVKDG-SGGDENEDSSALKKPRVVWSAELHQQFV 238
Query: 227 GAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKRL 270
AVNQLG+DKAVPK+ILDLM V+GLTRENVASHLQK+RLYLKRL
Sbjct: 239 TAVNQLGIDKAVPKRILDLMGVQGLTRENVASHLQKYRLYLKRL 282
>gi|388493620|gb|AFK34876.1| unknown [Medicago truncatula]
Length = 606
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 191/421 (45%), Positives = 261/421 (61%), Gaps = 46/421 (10%)
Query: 18 DKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDV 77
D+FP G+RVL VDDDPTCL +LE LR C YEVT +A AL +LREN+N FD+V+SDV
Sbjct: 27 DQFPAGLRVLVVDDDPTCLMILERMLRFCLYEVTKCKRAEVALSLLRENKNGFDIVLSDV 86
Query: 78 HMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQ 137
HMPDMDGFKLLEH+GLEMDLPVIM+SA +VMKG+THGACDYL+KPVRIE LKNIWQ
Sbjct: 87 HMPDMDGFKLLEHIGLEMDLPVIMMSADDGKNVVMKGVTHGACDYLIKPVRIEALKNIWQ 146
Query: 138 HVIRRKKVGPKD--QNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDE 195
HV+R++K KD Q+ L++ + A + ST GKS++KR+D++ + D
Sbjct: 147 HVVRKRKNSWKDLRQSGGLDERDREKKASTDANYSSST----NEGKSSKKRRDEEDEAD- 201
Query: 196 DGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTREN 255
+ +D +T KKPRVVW+ ELH++F+ VNQLG+DKAVPKKI+++MNV GLTREN
Sbjct: 202 -------DRDDCSTSKKPRVVWSIELHQQFMAVVNQLGLDKAVPKKIMEMMNVPGLTREN 254
Query: 256 VASHLQKFRLYLKRLSNET-PQAGMVAALGSKDSSYLRIGALDGFGDLRSLNSPGRLSSS 314
VAS LQK+RLYL+RLS + Q+ + + S S +++ DL++L++ G+ S+
Sbjct: 255 VASRLQKYRLYLRRLSGVSQQQSNLNNSFMSAQESIFGGTSVNEI-DLQTLSASGQFSAQ 313
Query: 315 AISS-----SYVPGNMFGRF---------NSTSGLSMHGIASSGMIQPGHSQSFNTSFNT 360
+++ Y P N RF +S +HGI + I+P +F+ S +
Sbjct: 314 SLAKLQAAGPYSPENSKLRFGDGQLQHMSSSKPVNFLHGIPIN--IEPKQFANFHQSAQS 371
Query: 361 IGKIQQAMFPANRISNLFQGVRTSSELNQLPQSKSTTQIGDFNHINS-----PTTSMAAT 415
G AN N + S L Q+ QS+ Q+ + N NS P++ M T
Sbjct: 372 FGS-------ANMRVNA-SAAKRSPWLTQMAQSQPRGQVLNEN-TNSHATMFPSSLMQPT 422
Query: 416 G 416
G
Sbjct: 423 G 423
>gi|302784610|ref|XP_002974077.1| hypothetical protein SELMODRAFT_173793 [Selaginella moellendorffii]
gi|300158409|gb|EFJ25032.1| hypothetical protein SELMODRAFT_173793 [Selaginella moellendorffii]
Length = 607
Score = 305 bits (780), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 164/275 (59%), Positives = 194/275 (70%), Gaps = 11/275 (4%)
Query: 18 DKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDV 77
D+FP G+RVL VDDD TCL +L+ L C Y+VT A AL MLREN+ FD+V+SDV
Sbjct: 12 DQFPAGLRVLVVDDDRTCLAILKKMLLRCAYDVTTCGMARLALAMLRENKERFDVVLSDV 71
Query: 78 HMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQ 137
MPDMDGFKLLE VGLEMDLPVIM+SA G+T LVMKGI HGACDYLLKP+RI+ELKNIWQ
Sbjct: 72 CMPDMDGFKLLELVGLEMDLPVIMMSANGETSLVMKGIIHGACDYLLKPIRIKELKNIWQ 131
Query: 138 HVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDG 197
HV RRK+ KD + + R + G + G++ G RK +D DE E
Sbjct: 132 HVFRRKRNILKDADGADHDRQKR--KPDEGDSMPAAGSAAAAGSKKRKEIKEDDDEFE-- 187
Query: 198 DDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVA 257
+ +DS T KKPRVVW+ ELH++FV AVNQLG+DKAVPK+IL+LMNV+GLTRENVA
Sbjct: 188 ----LDMDDSNTLKKPRVVWSVELHQQFVTAVNQLGIDKAVPKRILELMNVQGLTRENVA 243
Query: 258 SHLQKFRLYLKRLSNETPQ--AGMVAALGSKDSSY 290
SHLQK+RLYLKRLS Q M LGS D SY
Sbjct: 244 SHLQKYRLYLKRLSVAQQQNAVTMSMPLGS-DPSY 277
>gi|109631200|gb|ABG35776.1| SRR380 [Striga asiatica]
Length = 432
Score = 304 bits (779), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 175/313 (55%), Positives = 207/313 (66%), Gaps = 37/313 (11%)
Query: 79 MPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQH 138
MPDMDGFKLLE VGLEMDLPVIMLSA D KLVMKG+THGACDYL+KPVRIEEL+NIWQH
Sbjct: 1 MPDMDGFKLLEQVGLEMDLPVIMLSANSDPKLVMKGVTHGACDYLVKPVRIEELRNIWQH 60
Query: 139 VIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSN-RKRKDQDGDEDEDG 197
VIRRKK K++NK +Q +GE GQG N DQNGK+N RKRKD DE+
Sbjct: 61 VIRRKKFVSKNENKSADQSKPNQASGE-GQGGAIPDNGDQNGKTNVRKRKD-----DENV 114
Query: 198 DDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVA 257
+DG+ENED TQKKPRVVW+ ELHRKFV AVNQLG++KAVPK+ILDLMNV GLTRENVA
Sbjct: 115 SEDGNENEDPATQKKPRVVWSIELHRKFVAAVNQLGIEKAVPKRILDLMNVNGLTRENVA 174
Query: 258 SHLQKFRLYLKRLSN-ETPQAGMVAALGSKDSSYLRIGALDGFGDLRSLNSPGRLSSSAI 316
SHLQK+RLYLKR+S+ QA M AA G KDS ++R+G G +A
Sbjct: 175 SHLQKYRLYLKRISSVAAQQANMAAAFGVKDSPFIRMGPFSGL-------------PNAA 221
Query: 317 SSSYVPGNMFGRFNSTSGLSM-HGIASSGMIQPGHSQSFNTSFNTIGKIQQAMFPANRIS 375
Y G M GR N + +++ I+ S I S N +GK+
Sbjct: 222 FPHYSSGGMLGRINPPTNMNLIRDISPSAFIP-------TNSLNALGKMPNP-------- 266
Query: 376 NLFQGVRTSSELN 388
NLF G++ S EL+
Sbjct: 267 NLFPGIQLSLELD 279
Score = 39.3 bits (90), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 20/108 (18%)
Query: 584 NTLLSGNCTMGPFSQSMDQSNSPYIAQLT-GVEKAPLNTKLRSNDDFLLEQSKS------ 636
N+L+SG PF+ +M+ S PY++ + + P N S DD EQ ++
Sbjct: 326 NSLISGQ----PFNLAMN-SGEPYVSSHSIDMSSGPGNGMALSLDDLGGEQGQNGHGSKV 380
Query: 637 -------HDGFIQNNYDPMDDMMSGILKRDSNETILMDGELGFDAYSL 677
GF +YD +DDMM+ ++KR+ +E L + + G D YS
Sbjct: 381 GYGEKSQQGGFRGRSYDSLDDMMNAMIKREHDEKDL-NCDFGLDGYSF 427
>gi|302770951|ref|XP_002968894.1| type B response regulator [Selaginella moellendorffii]
gi|300163399|gb|EFJ30010.1| type B response regulator [Selaginella moellendorffii]
Length = 602
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 163/275 (59%), Positives = 197/275 (71%), Gaps = 11/275 (4%)
Query: 18 DKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDV 77
D+FP G+RVL VDDD TCL +L+ L C Y+VT A AL MLREN+ FD+V+SDV
Sbjct: 12 DQFPAGLRVLVVDDDRTCLAILKKMLLRCAYDVTTCGMARLALAMLRENKERFDVVLSDV 71
Query: 78 HMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQ 137
MPDMDGFKLLE VGLEMDLPVIM+SA G+T LVMKGI HGACDYLLKP+RI+ELKNIWQ
Sbjct: 72 CMPDMDGFKLLELVGLEMDLPVIMMSANGETSLVMKGIIHGACDYLLKPIRIKELKNIWQ 131
Query: 138 HVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDG 197
HV RRK+ KD + + + + EG +M S S ++++ ++ DE+ +
Sbjct: 132 HVFRRKRNILKDADG-ADHDRQKRKPDEG--DSMPAAGSAAAAGSKKRKEIKEDDEEFEL 188
Query: 198 DDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVA 257
D D DS T KKPRVVW+ ELH++FV AVNQLG+DKAVPK+IL+LMNV+GLTRENVA
Sbjct: 189 DMD-----DSNTLKKPRVVWSVELHQQFVTAVNQLGIDKAVPKRILELMNVQGLTRENVA 243
Query: 258 SHLQKFRLYLKRLSNETPQ--AGMVAALGSKDSSY 290
SHLQK+RLYLKRLS Q M LGS D SY
Sbjct: 244 SHLQKYRLYLKRLSVAQQQNAVTMSMPLGS-DPSY 277
>gi|118790775|tpd|FAA00258.1| TPA: response regulator [Oryza sativa Japonica Group]
Length = 690
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 171/347 (49%), Positives = 224/347 (64%), Gaps = 33/347 (9%)
Query: 19 KFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVH 78
KFP G+RVLAVDD P CL +LE LR C+Y+ T+T A TAL+MLRE +FDLVISDVH
Sbjct: 11 KFPEGLRVLAVDDSPVCLMLLEALLRRCKYQPTMTRDAATALRMLRERPGDFDLVISDVH 70
Query: 79 MPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQH 138
M DMDGFKLLE +GLEMDLPVIM SA G+ + +MKG+THGACDYL+KPV +++++NIWQH
Sbjct: 71 MLDMDGFKLLELIGLEMDLPVIMQSANGELETMMKGVTHGACDYLVKPVSLKDIQNIWQH 130
Query: 139 VIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGD 198
V R++K+ ++ N N VGA + K RK ++ DGD
Sbjct: 131 VWRKRKLDIRNHNGGYNDGGELVGATRTKR------------KYTRKMRN-------DGD 171
Query: 199 DDGH--ENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENV 256
+ G EN DST K+ RVVWTPELHR FV AV++LGVD+AVP+KIL +M V+ +TREN+
Sbjct: 172 NYGENKENMDSTL-KRQRVVWTPELHRDFVIAVHELGVDRAVPRKILRMMKVDYMTRENI 230
Query: 257 ASHLQKFRLYLKRLSNETPQAGMVAALGSKDSSYL-RIGALDGFGDLRSLNSPGRLSSSA 315
ASHLQK+RLYLKR+S +T GM + Y+ + AL + + N RL+ +
Sbjct: 231 ASHLQKYRLYLKRISTQT---GMDPDQFPEKWKYMNELDALKNYCE----NGRYRLTPAI 283
Query: 316 ISSSYVPGNMFGRFNSTSGLSMHGIASSGMIQPGHSQSFNTSFNTIG 362
SSS N F R NS S L+ +G + +Q +SQ N + T+G
Sbjct: 284 ASSSS--SNPFARMNSASALATNGFLPTHSVQLKNSQR-NMAMGTVG 327
>gi|125556273|gb|EAZ01879.1| hypothetical protein OsI_23901 [Oryza sativa Indica Group]
Length = 684
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 169/346 (48%), Positives = 222/346 (64%), Gaps = 31/346 (8%)
Query: 19 KFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVH 78
KFP G+RVLAVDD P CL +LE LR C+Y+ T+T A TAL+MLRE +FDLVISDVH
Sbjct: 11 KFPEGLRVLAVDDSPVCLMLLEALLRRCKYQPTMTRDAATALRMLRERPGDFDLVISDVH 70
Query: 79 MPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQH 138
M DMDGFKLLE +GLEMDLPVIM SA G+ + +MKG+THGACDYL+KPV +++++NIWQH
Sbjct: 71 MLDMDGFKLLELIGLEMDLPVIMQSANGELETMMKGVTHGACDYLVKPVSLKDIQNIWQH 130
Query: 139 VIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGD 198
V R++K+ ++ N N VGA + K RK ++ DGD
Sbjct: 131 VWRKRKLDIRNHNGGYNDGGELVGATRTKR------------KYTRKMRN-------DGD 171
Query: 199 DDGH--ENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENV 256
+ G EN DST +++ RVVWTPELHR FV AV++LGVD+AVP+KIL +M V+ +TREN+
Sbjct: 172 NYGENKENMDSTLKRQ-RVVWTPELHRDFVIAVHELGVDRAVPRKILRMMKVDYMTRENI 230
Query: 257 ASHLQKFRLYLKRLSNETPQAGMVAALGSKDSSYLRIGALDGFGDLRSLNSPGRLSSSAI 316
ASHLQK+RLYLKR+S +T GM + Y I LD L++ GR +
Sbjct: 231 ASHLQKYRLYLKRISTQT---GMDPDQFPEKWKY--INELDA---LKNYCENGRYRLTPA 282
Query: 317 SSSYVPGNMFGRFNSTSGLSMHGIASSGMIQPGHSQSFNTSFNTIG 362
+S N F R NS S L+ +G + +Q +SQ N + T+G
Sbjct: 283 IASSSSSNPFARMNSASALATNGFLPTHSVQLKNSQR-NMAMGTVG 327
>gi|125598040|gb|EAZ37820.1| hypothetical protein OsJ_22159 [Oryza sativa Japonica Group]
Length = 713
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 171/347 (49%), Positives = 224/347 (64%), Gaps = 33/347 (9%)
Query: 19 KFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVH 78
KFP G+RVLAVDD P CL +LE LR C+Y+ T+T A TAL+MLRE +FDLVISDVH
Sbjct: 11 KFPEGLRVLAVDDSPVCLMLLEALLRRCKYQPTMTRDAATALRMLRERPGDFDLVISDVH 70
Query: 79 MPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQH 138
M DMDGFKLLE +GLEMDLPVIM SA G+ + +MKG+THGACDYL+KPV +++++NIWQH
Sbjct: 71 MLDMDGFKLLELIGLEMDLPVIMQSANGELETMMKGVTHGACDYLVKPVSLKDIQNIWQH 130
Query: 139 VIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGD 198
V R++K+ ++ N N VGA + K RK ++ DGD
Sbjct: 131 VWRKRKLDIRNHNGGYNDGGELVGATRTKR------------KYTRKMRN-------DGD 171
Query: 199 DDGH--ENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENV 256
+ G EN DST K+ RVVWTPELHR FV AV++LGVD+AVP+KIL +M V+ +TREN+
Sbjct: 172 NYGENKENMDSTL-KRQRVVWTPELHRDFVIAVHELGVDRAVPRKILRMMKVDYMTRENI 230
Query: 257 ASHLQKFRLYLKRLSNETPQAGMVAALGSKDSSYL-RIGALDGFGDLRSLNSPGRLSSSA 315
ASHLQK+RLYLKR+S +T GM + Y+ + AL + + N RL+ +
Sbjct: 231 ASHLQKYRLYLKRISTQT---GMDPDQFPEKWKYMNELDALKNYCE----NGRYRLTPAI 283
Query: 316 ISSSYVPGNMFGRFNSTSGLSMHGIASSGMIQPGHSQSFNTSFNTIG 362
SSS N F R NS S L+ +G + +Q +SQ N + T+G
Sbjct: 284 ASSSS--SNPFARMNSASALATNGFLPTHSVQLKNSQR-NMAMGTVG 327
>gi|297606271|ref|NP_001058204.2| Os06g0647200 [Oryza sativa Japonica Group]
gi|255677276|dbj|BAF20118.2| Os06g0647200 [Oryza sativa Japonica Group]
Length = 663
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 171/347 (49%), Positives = 224/347 (64%), Gaps = 33/347 (9%)
Query: 19 KFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVH 78
KFP G+RVLAVDD P CL +LE LR C+Y+ T+T A TAL+MLRE +FDLVISDVH
Sbjct: 26 KFPEGLRVLAVDDSPVCLMLLEALLRRCKYQPTMTRDAATALRMLRERPGDFDLVISDVH 85
Query: 79 MPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQH 138
M DMDGFKLLE +GLEMDLPVIM SA G+ + +MKG+THGACDYL+KPV +++++NIWQH
Sbjct: 86 MLDMDGFKLLELIGLEMDLPVIMQSANGELETMMKGVTHGACDYLVKPVSLKDIQNIWQH 145
Query: 139 VIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGD 198
V R++K+ ++ N N VGA + K RK ++ DGD
Sbjct: 146 VWRKRKLDIRNHNGGYNDGGELVGATRTKR------------KYTRKMRN-------DGD 186
Query: 199 DDGH--ENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENV 256
+ G EN DST K+ RVVWTPELHR FV AV++LGVD+AVP+KIL +M V+ +TREN+
Sbjct: 187 NYGENKENMDSTL-KRQRVVWTPELHRDFVIAVHELGVDRAVPRKILRMMKVDYMTRENI 245
Query: 257 ASHLQKFRLYLKRLSNETPQAGMVAALGSKDSSYL-RIGALDGFGDLRSLNSPGRLSSSA 315
ASHLQK+RLYLKR+S +T GM + Y+ + AL + + N RL+ +
Sbjct: 246 ASHLQKYRLYLKRISTQT---GMDPDQFPEKWKYMNELDALKNYCE----NGRYRLTPAI 298
Query: 316 ISSSYVPGNMFGRFNSTSGLSMHGIASSGMIQPGHSQSFNTSFNTIG 362
SSS N F R NS S L+ +G + +Q +SQ N + T+G
Sbjct: 299 ASSS--SSNPFARMNSASALATNGFLPTHSVQLKNSQR-NMAMGTVG 342
>gi|51535423|dbj|BAD37322.1| putative response regulator 9 [Oryza sativa Japonica Group]
gi|51535645|dbj|BAD37619.1| putative response regulator 9 [Oryza sativa Japonica Group]
Length = 694
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 171/347 (49%), Positives = 224/347 (64%), Gaps = 33/347 (9%)
Query: 19 KFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVH 78
KFP G+RVLAVDD P CL +LE LR C+Y+ T+T A TAL+MLRE +FDLVISDVH
Sbjct: 11 KFPEGLRVLAVDDSPVCLMLLEALLRRCKYQPTMTRDAATALRMLRERPGDFDLVISDVH 70
Query: 79 MPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQH 138
M DMDGFKLLE +GLEMDLPVIM SA G+ + +MKG+THGACDYL+KPV +++++NIWQH
Sbjct: 71 MLDMDGFKLLELIGLEMDLPVIMQSANGELETMMKGVTHGACDYLVKPVSLKDIQNIWQH 130
Query: 139 VIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGD 198
V R++K+ ++ N N VGA + K RK ++ DGD
Sbjct: 131 VWRKRKLDIRNHNGGYNDGGELVGATRTKR------------KYTRKMRN-------DGD 171
Query: 199 DDGH--ENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENV 256
+ G EN DST K+ RVVWTPELHR FV AV++LGVD+AVP+KIL +M V+ +TREN+
Sbjct: 172 NYGENKENMDSTL-KRQRVVWTPELHRDFVIAVHELGVDRAVPRKILRMMKVDYMTRENI 230
Query: 257 ASHLQKFRLYLKRLSNETPQAGMVAALGSKDSSYL-RIGALDGFGDLRSLNSPGRLSSSA 315
ASHLQK+RLYLKR+S +T GM + Y+ + AL + + N RL+ +
Sbjct: 231 ASHLQKYRLYLKRISTQT---GMDPDQFPEKWKYMNELDALKNYCE----NGRYRLTPAI 283
Query: 316 ISSSYVPGNMFGRFNSTSGLSMHGIASSGMIQPGHSQSFNTSFNTIG 362
SSS N F R NS S L+ +G + +Q +SQ N + T+G
Sbjct: 284 ASSSS--SNPFARMNSASALATNGFLPTHSVQLKNSQR-NMAMGTVG 327
>gi|255636387|gb|ACU18532.1| unknown [Glycine max]
Length = 220
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 151/214 (70%), Positives = 173/214 (80%), Gaps = 1/214 (0%)
Query: 13 EDGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDL 72
EDG D+FP+GMRVLAVDDDP CLKVLEN LR CQY VT TNQAV AL MLRENRN FDL
Sbjct: 8 EDGGCDRFPVGMRVLAVDDDPICLKVLENLLRKCQYHVTTTNQAVEALTMLRENRNKFDL 67
Query: 73 VISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEEL 132
VISDV+MPD+DGFKLLE VGLEMDLPVIMLSA+GDTKLVMKG+THGACDYLLKPVRIEEL
Sbjct: 68 VISDVNMPDIDGFKLLELVGLEMDLPVIMLSAHGDTKLVMKGVTHGACDYLLKPVRIEEL 127
Query: 133 KNIWQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGD 192
KNIWQHV+RRK +DQNK N+E + AG G QG S ++DQN + +KRKDQ +
Sbjct: 128 KNIWQHVVRRKNFDSRDQNKASNEEKAPNFAGGGSQGLRSENSADQNKRLGKKRKDQSDE 187
Query: 193 EDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFV 226
E+E G+++ + + S QKK RVVW+ ELHRKFV
Sbjct: 188 EEEGGEENEDDEDPS-AQKKARVVWSVELHRKFV 220
>gi|312283277|dbj|BAJ34504.1| unnamed protein product [Thellungiella halophila]
Length = 668
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 165/354 (46%), Positives = 214/354 (60%), Gaps = 44/354 (12%)
Query: 17 IDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISD 76
++ FP G+RVL VDDDPTCL +LE LR C YEVT N+A AL +LR+N++ FD+VISD
Sbjct: 28 VEMFPSGLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVISD 87
Query: 77 VHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIW 136
VHMPDMDGFKLLEHVGLEMDLPVIM+SA +V+KG+THGA DYL+KPVR+E LKNIW
Sbjct: 88 VHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKNIW 147
Query: 137 QHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDED 196
QHV+R+++ S E TG Q + G ED
Sbjct: 148 QHVVRKRR--------------SEWSVPEHSGSVEDTGERQQQQQRGGGGAAVSGGEDAA 193
Query: 197 GDDDGHENE---------------------------DSTTQKKPRVVWTPELHRKFVGAV 229
D+ NE D++ KKPRVVW+ ELH++FV AV
Sbjct: 194 DDNSSSVNEGNNWRSSSSSRKRKDEEGEEQGEDKDEDASNLKKPRVVWSVELHQQFVAAV 253
Query: 230 NQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKRLSNETPQAGMV--AALGSKD 287
NQLGV+KAVPKKIL+LMNV GLTRENVASHLQK+R+YL+RL + G + + + +D
Sbjct: 254 NQLGVEKAVPKKILELMNVPGLTRENVASHLQKYRIYLRRLGGVSQHQGNLNNSFMTGQD 313
Query: 288 SSYLRIGALDGFGDLRSLNSPGRLSSSAISSSYVPGNMFGRFNSTSGLSMHGIA 341
+S+ + L+GF DL++L G+L + +++ G S SGL + I
Sbjct: 314 ASFGPLSTLNGF-DLQALAVTGQLPAQSLAQLQAAGLGRPAMVSKSGLPVSSIV 366
>gi|255547918|ref|XP_002515016.1| two-component sensor histidine kinase bacteria, putative [Ricinus
communis]
gi|223546067|gb|EEF47570.1| two-component sensor histidine kinase bacteria, putative [Ricinus
communis]
Length = 584
Score = 298 bits (764), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 159/293 (54%), Positives = 198/293 (67%), Gaps = 17/293 (5%)
Query: 18 DKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDV 77
D FP G+RVL VDDDPT LK+LE L+ C YEVT A AL +LRE ++ +D+VISDV
Sbjct: 11 DAFPAGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLARDALYLLRERKDGYDIVISDV 70
Query: 78 HMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQ 137
+MPDMDGFKLLEHVGLEMDLPVIM+S G+T VMKG+ HGACDYLLKP+R++EL+NIWQ
Sbjct: 71 NMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQ 130
Query: 138 HVIRRKKVGPKDQNKLLNQEN---SRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDED 194
HV R+K +D L E+ +R+G+ G + G ++ S +KRKD + D
Sbjct: 131 HVFRKKIHEVRDIEILEGMESIQMARIGSDHSDDGYLFCG---EDLTSVKKRKDIENKHD 187
Query: 195 EDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRE 254
D DG +S+T KK RVVW+ +LH+KFV AVNQ+G DK PKKILDLMNV LTRE
Sbjct: 188 ---DKDG----ESSTTKKARVVWSVDLHQKFVKAVNQIGPDKVGPKKILDLMNVPWLTRE 240
Query: 255 NVASHLQKFRLYLKRLSNETPQAGMVAALGSKDSSYLRIGALDG-FGDLRSLN 306
NVASHLQK+RLYL RL E + + +SS +G G FG S+N
Sbjct: 241 NVASHLQKYRLYLSRLQKENDSKTSIGGIKQSESS---LGESAGSFGTQNSIN 290
>gi|168015656|ref|XP_001760366.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688380|gb|EDQ74757.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 262
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 156/267 (58%), Positives = 189/267 (70%), Gaps = 17/267 (6%)
Query: 21 PIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMP 80
P G++VL VDDD LK+LE LR C+Y VT N A AL MLRENR+ FDLVISDV+MP
Sbjct: 12 PAGLKVLVVDDDNVILKILERMLRECKYAVTTCNSATKALAMLRENRSYFDLVISDVYMP 71
Query: 81 DMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
DMDGFKLLE +GLE+DLPVIM+S G+ VM+GI HGACDYLLKPVR+EEL+NIWQHV+
Sbjct: 72 DMDGFKLLEAIGLELDLPVIMMSRDGEIDSVMRGIKHGACDYLLKPVRLEELRNIWQHVV 131
Query: 141 RRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDD 200
RK V P L+++E S GE + N+D + S RKRK E +D+
Sbjct: 132 -RKLVSP----ILVSKEES----GELDEYPKHQDNADFDATS-RKRK-------ERLEDE 174
Query: 201 GHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHL 260
ED KK R+VW+PELH++FV AVN LGVDKAVP+KILD+MNV+GLTRENVASHL
Sbjct: 175 TQLVEDVNNLKKARIVWSPELHQQFVNAVNYLGVDKAVPRKILDIMNVQGLTRENVASHL 234
Query: 261 QKFRLYLKRLSNETPQAGMVAALGSKD 287
QK+R YLKRL TPQ VA+ + +
Sbjct: 235 QKYRSYLKRLIGVTPQPHPVASFQAAE 261
>gi|449450407|ref|XP_004142954.1| PREDICTED: two-component response regulator ARR11-like [Cucumis
sativus]
gi|449494494|ref|XP_004159561.1| PREDICTED: two-component response regulator ARR11-like [Cucumis
sativus]
Length = 583
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 155/272 (56%), Positives = 187/272 (68%), Gaps = 8/272 (2%)
Query: 18 DKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDV 77
D FPIG+RVL VDDDPT LK+LE L+ C YEVT A AL +LRE ++ +D+VISDV
Sbjct: 11 DVFPIGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCCLAREALSLLRERKDGYDIVISDV 70
Query: 78 HMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQ 137
+MPDMDGFKLLEHVGLEMDLPVIM+S G+T VMKG+ HGACDYLLKP+R++EL+NIWQ
Sbjct: 71 NMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQ 130
Query: 138 HVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDG 197
HV+R+K +D E + + S + S RKRKD D ED+D
Sbjct: 131 HVLRKKIQEGRDIEGHDVIEGIHILRNVADRYDDSQFLRGEEPFSVRKRKDIDKHEDKDF 190
Query: 198 DDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVA 257
D+++ KK RVVW+ ELH+KFV AVNQ+G DK PKKILDLMNV LTRENVA
Sbjct: 191 C-------DTSSTKKARVVWSVELHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVA 243
Query: 258 SHLQKFRLYLKRLSNET-PQAGMVAALGSKDS 288
SHLQK+RLYL RL E P+A V + KDS
Sbjct: 244 SHLQKYRLYLSRLQKENDPKACFVVGMKPKDS 275
>gi|357126386|ref|XP_003564868.1| PREDICTED: uncharacterized protein LOC100824670 [Brachypodium
distachyon]
Length = 577
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 153/272 (56%), Positives = 187/272 (68%), Gaps = 14/272 (5%)
Query: 15 GDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVI 74
D FP G+RVL VDDDPT LK+LE LR C YEVT A AL++LRE ++ FD+VI
Sbjct: 3 ADATVFPYGLRVLVVDDDPTWLKILEKMLRKCSYEVTTCGLARVALEILRERKSKFDIVI 62
Query: 75 SDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKN 134
SDV+MPDMDGFKLLEH+GLEMDLPVIM+S G+T VMKG+ HGACDYLLKPVR++EL+N
Sbjct: 63 SDVNMPDMDGFKLLEHIGLEMDLPVIMMSIDGETSRVMKGVQHGACDYLLKPVRMKELRN 122
Query: 135 IWQHVIRRKKVGPKD---QNKLLNQENSRVG-AGEGGQGAMSTGNSDQNGKSNRKRKDQD 190
IWQHV R++ K+ + + + R G G +G T +SD + RKRKD D
Sbjct: 123 IWQHVYRKRMHEVKEIEGHDSCDDLQILRYGFEGFDEKGIFITADSD----TTRKRKDLD 178
Query: 191 GDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEG 250
D + DG T KK RVVW+ +LH+KFV AVNQ+G DK PKKILDLMNV G
Sbjct: 179 KDHADQDSSDG------ATAKKARVVWSVDLHQKFVNAVNQIGFDKVGPKKILDLMNVPG 232
Query: 251 LTRENVASHLQKFRLYLKRLSNETPQAGMVAA 282
+TRENVASHLQK+RLYL RL + + + AA
Sbjct: 233 ITRENVASHLQKYRLYLGRLQKQNEERILGAA 264
>gi|218189558|gb|EEC71985.1| hypothetical protein OsI_04831 [Oryza sativa Indica Group]
Length = 582
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 154/269 (57%), Positives = 184/269 (68%), Gaps = 10/269 (3%)
Query: 16 DIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVIS 75
D FP G+RVL VDDDPT LK+LE LR C YEVT A AL +LRE +N FD+VIS
Sbjct: 2 DATAFPYGLRVLVVDDDPTWLKILEKMLRKCSYEVTTCGLARVALDILRERKNKFDIVIS 61
Query: 76 DVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNI 135
DV+MPDMDGFKLLEH+GLEMDLPVIM+S G+T VMKG+ HGACDYLLKPVR++EL+NI
Sbjct: 62 DVNMPDMDGFKLLEHIGLEMDLPVIMMSIDGETSRVMKGVQHGACDYLLKPVRMKELRNI 121
Query: 136 WQHVIRRK--KVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDE 193
WQHV R+K +V + N + + EG SD + + RKRKD D D
Sbjct: 122 WQHVYRKKMHEVKEIEGNDSCDDLQILRNSFEGLDEKSLFMRSDSD--TMRKRKDVDKDH 179
Query: 194 DEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTR 253
+ E+ D T KK RVVW+ +LH+KFV AVNQ+G DK PKKILDLMNV GLTR
Sbjct: 180 AD------QESSDGNTVKKARVVWSVDLHQKFVNAVNQIGFDKVGPKKILDLMNVPGLTR 233
Query: 254 ENVASHLQKFRLYLKRLSNETPQAGMVAA 282
ENVASHLQK+RLYL RL + + + AA
Sbjct: 234 ENVASHLQKYRLYLSRLQKQNEERILGAA 262
>gi|118790785|tpd|FAA00259.1| TPA: response regulator [Oryza sativa Japonica Group]
gi|222619710|gb|EEE55842.1| hypothetical protein OsJ_04457 [Oryza sativa Japonica Group]
Length = 582
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 154/269 (57%), Positives = 184/269 (68%), Gaps = 10/269 (3%)
Query: 16 DIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVIS 75
D FP G+RVL VDDDPT LK+LE LR C YEVT A AL +LRE +N FD+VIS
Sbjct: 2 DATAFPYGLRVLVVDDDPTWLKILEKMLRKCSYEVTTCGLARVALDILRERKNKFDIVIS 61
Query: 76 DVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNI 135
DV+MPDMDGFKLLEH+GLEMDLPVIM+S G+T VMKG+ HGACDYLLKPVR++EL+NI
Sbjct: 62 DVNMPDMDGFKLLEHIGLEMDLPVIMMSIDGETSRVMKGVQHGACDYLLKPVRMKELRNI 121
Query: 136 WQHVIRRK--KVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDE 193
WQHV R+K +V + N + + EG SD + + RKRKD D D
Sbjct: 122 WQHVYRKKMHEVKEIEGNDSCDDLQILRNSFEGLDEKSLFMRSDSD--TMRKRKDVDKDH 179
Query: 194 DEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTR 253
+ E+ D T KK RVVW+ +LH+KFV AVNQ+G DK PKKILDLMNV GLTR
Sbjct: 180 AD------QESSDGNTVKKARVVWSVDLHQKFVNAVNQIGFDKVGPKKILDLMNVPGLTR 233
Query: 254 ENVASHLQKFRLYLKRLSNETPQAGMVAA 282
ENVASHLQK+RLYL RL + + + AA
Sbjct: 234 ENVASHLQKYRLYLSRLQKQNEERILGAA 262
>gi|356502390|ref|XP_003520002.1| PREDICTED: uncharacterized protein LOC100817125 [Glycine max]
Length = 633
Score = 295 bits (756), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 158/304 (51%), Positives = 210/304 (69%), Gaps = 14/304 (4%)
Query: 19 KFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVH 78
+FP+G+RVL VDDD T LK++E C+Y VT +A AL +LRE + FD+V+SDVH
Sbjct: 9 EFPVGLRVLVVDDDATTLKIIEQMSIRCRYRVTTCTEATVALNLLRERKGCFDVVLSDVH 68
Query: 79 MPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQH 138
MPDMDG+KLLEHVGLEMDLPVIM+S T VMKGI HGACDYL+KPVR EEL+NIWQH
Sbjct: 69 MPDMDGYKLLEHVGLEMDLPVIMMSGDSTTSAVMKGIRHGACDYLIKPVREEELRNIWQH 128
Query: 139 VIRRKKVGPKDQNKLLNQENS-RVGAG-EGGQGAMSTGNSDQNGKSNRKRKDQDGDEDED 196
V+R+ K+ + + E+S R G + + S ++ + K+ +KR ++ E
Sbjct: 129 VVRKFWNDNKELDNSGSMEDSDRNKWGNDDAEYTSSVADAAEVVKAPKKRSSLKEEDIE- 187
Query: 197 GDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENV 256
E++D T KKPRVVW+ ELH++FV AVNQLG+DKAVPK+IL+LMNV GLTRENV
Sbjct: 188 -----LESDDPATSKKPRVVWSVELHQQFVSAVNQLGLDKAVPKRILELMNVPGLTRENV 242
Query: 257 ASHLQKFRLYLKRLSNETPQA-GMVAAL-GSKDSSYLRIGALDGFGDLRSLNSPGRLSSS 314
ASHLQKFRLYLKRLS Q GM+ A+ G+ +S ++GA F D+++L + G +
Sbjct: 243 ASHLQKFRLYLKRLSGVAQQQNGMLNAIPGTIES---KLGATGRF-DIQALAAAGHVPPE 298
Query: 315 AISS 318
+++
Sbjct: 299 TLAA 302
>gi|168010903|ref|XP_001758143.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690599|gb|EDQ76965.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 239
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 154/256 (60%), Positives = 183/256 (71%), Gaps = 17/256 (6%)
Query: 21 PIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMP 80
P G++VL VDD+P L ++E L+ CQY VT N A AL MLRENRN FDLVISDV+MP
Sbjct: 1 PAGLKVLVVDDEPLALMIVERMLQICQYTVTTCNSATKALAMLRENRNYFDLVISDVYMP 60
Query: 81 DMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
DMDGFKLLE +GLE+DLPVIM+S G+T VMKGI HGACDYLLKPVR++EL NIWQHV+
Sbjct: 61 DMDGFKLLEAIGLELDLPVIMMSGDGETDSVMKGIRHGACDYLLKPVRLKELINIWQHVV 120
Query: 141 RRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDD 200
RK V P+D + +E S GE + N+D + + RKRK E +D
Sbjct: 121 -RKLVTPRD----IPKEES----GEWDEFPKHQDNADFDSTA-RKRK-------ERSEDV 163
Query: 201 GHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHL 260
ED KK RVVW+ ELH++FV AVN LGVDKAVP+KILD+MNV+GLTRENVASHL
Sbjct: 164 AQLVEDVNNLKKARVVWSAELHQQFVNAVNYLGVDKAVPRKILDIMNVQGLTRENVASHL 223
Query: 261 QKFRLYLKRLSNETPQ 276
QK+RLYLKRL TPQ
Sbjct: 224 QKYRLYLKRLIGVTPQ 239
>gi|168062796|ref|XP_001783363.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665113|gb|EDQ51808.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 268
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 154/266 (57%), Positives = 195/266 (73%), Gaps = 10/266 (3%)
Query: 18 DKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDV 77
D+FP+GMRVL VDDDPTCL +LE L C Y VT +A AL +LRE+ FDLVISDV
Sbjct: 6 DEFPVGMRVLVVDDDPTCLVLLERMLILCSYRVTTCGRATDALLLLREDIGKFDLVISDV 65
Query: 78 HMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQ 137
MPDMDGFKLLE VGLEMDLPVIM+S G+T VM+G+ HGACDYL+KPV I+EL+N+WQ
Sbjct: 66 DMPDMDGFKLLELVGLEMDLPVIMMSGNGETSAVMEGVIHGACDYLIKPVGIKELRNVWQ 125
Query: 138 HVIRRKKVGPK-------DQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQD 190
HV+R+K+ K ++ ++ GA + + +T +D N K +++RK
Sbjct: 126 HVVRKKRQEVKAVSMKSIEEAGGCERQKRAGGADDADYTSSATDTTDGNWKLSKRRK--- 182
Query: 191 GDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEG 250
G+ E+ +DD EN+D +T KKPRVVW+ ELH++FV AVNQLG+DKAVPK+IL+LM V+G
Sbjct: 183 GEFKEENEDDNEENDDPSTMKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMGVQG 242
Query: 251 LTRENVASHLQKFRLYLKRLSNETPQ 276
LTRENVASHLQK+RLYLKRLS T Q
Sbjct: 243 LTRENVASHLQKYRLYLKRLSGVTNQ 268
>gi|242059591|ref|XP_002458941.1| hypothetical protein SORBIDRAFT_03g043080 [Sorghum bicolor]
gi|241930916|gb|EES04061.1| hypothetical protein SORBIDRAFT_03g043080 [Sorghum bicolor]
Length = 579
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 155/271 (57%), Positives = 185/271 (68%), Gaps = 14/271 (5%)
Query: 16 DIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVIS 75
D FP G+RVL VDDDPT LK+LE LR C YEVT A AL++LRE RN FD+VIS
Sbjct: 5 DATAFPYGLRVLVVDDDPTWLKILEKMLRKCSYEVTTCGLASVALQILRERRNKFDIVIS 64
Query: 76 DVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNI 135
DV+MPDMDGFKLLE +GLEMDLPVIM+S G+T VMKG+ HGACDYLLKPVR++EL+NI
Sbjct: 65 DVNMPDMDGFKLLELIGLEMDLPVIMMSIDGETSRVMKGVQHGACDYLLKPVRMKELRNI 124
Query: 136 WQHVIRRKKVGPKD---QNKLLNQENSRVGA-GEGGQGAMSTGNSDQNGKSNRKRKDQDG 191
WQHV R+K K+ + + + R G G +G +SD + RKRKD D
Sbjct: 125 WQHVYRKKMHEVKEIEGNDSCDDLQIFRNGVEGFDERGLFMRADSD----TMRKRKDMDK 180
Query: 192 DEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGL 251
D + DG T KK RVVW+ +LH+KFV AVNQ+G DK PKKILDLM+V GL
Sbjct: 181 DHADQDSSDG------ATVKKARVVWSVDLHQKFVNAVNQIGFDKVGPKKILDLMSVPGL 234
Query: 252 TRENVASHLQKFRLYLKRLSNETPQAGMVAA 282
TRENVASHLQK+RLYL RL + + M AA
Sbjct: 235 TRENVASHLQKYRLYLSRLQKQNEERIMGAA 265
>gi|356519365|ref|XP_003528343.1| PREDICTED: uncharacterized protein LOC100804937 [Glycine max]
Length = 633
Score = 292 bits (748), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 154/301 (51%), Positives = 200/301 (66%), Gaps = 10/301 (3%)
Query: 19 KFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVH 78
+FP+G+RVL VDDD T LK++E C+Y VT +A AL +LRE + FD+V+SDVH
Sbjct: 7 EFPVGLRVLVVDDDATTLKIIEQMSIRCRYRVTTCTEATVALNLLRERKGCFDVVLSDVH 66
Query: 79 MPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQH 138
MPDMDG+KLLEHVGLEMDLPVIM+S T VMKGI HGACDYL+KPVR EEL+NIWQH
Sbjct: 67 MPDMDGYKLLEHVGLEMDLPVIMMSGDSTTSAVMKGIRHGACDYLIKPVREEELRNIWQH 126
Query: 139 VIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGD 198
V+R+ K+Q+ + E+S G A T +D K++ +ED +
Sbjct: 127 VVRKFWNDSKEQDNSGSMEDSDQNK-RGNDDAEYTSVADAAVVKAPKKRSSLKEEDIE-- 183
Query: 199 DDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVAS 258
E++D KKPRVVW+ ELH++FV AVNQLG+DKAVPK+IL+LMNV GLTRENVAS
Sbjct: 184 ---LESDDPAASKKPRVVWSVELHQQFVSAVNQLGLDKAVPKRILELMNVPGLTRENVAS 240
Query: 259 HLQKFRLYLKRLSNETPQA-GMVAALGSKDSSYLRIGALDGFGDLRSLNSPGRLSSSAIS 317
HLQKFRLYLKRL+ Q GM+ + S L +G D+++L + G + ++
Sbjct: 241 HLQKFRLYLKRLTGVAQQQNGMLNTVPGPIESNL---GTNGRFDVQALAAAGHVPPETLA 297
Query: 318 S 318
+
Sbjct: 298 A 298
>gi|356569201|ref|XP_003552793.1| PREDICTED: two-component response regulator ARR11-like [Glycine
max]
Length = 557
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 147/266 (55%), Positives = 182/266 (68%), Gaps = 9/266 (3%)
Query: 11 GCEDGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNF 70
GC FP G+RVL VDDDPT LK+LE L+ C YEVT A AL +LRE ++ +
Sbjct: 4 GCFSSPKRDFPAGLRVLVVDDDPTWLKILEKMLKKCNYEVTTCCLARHALSLLRERKDGY 63
Query: 71 DLVISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIE 130
D+VISDV+MPDMDGFKLLEHVGLEMDLPVIM+S G+T VMKG+ HGACDYLLKP+R++
Sbjct: 64 DIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSKVMKGVQHGACDYLLKPIRMK 123
Query: 131 ELKNIWQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQD 190
EL+NIWQHV R+K K+ + R G+ G + + ++ S++KRKD D
Sbjct: 124 ELRNIWQHVFRKKIHEAKEFESFESIHLMRNGSELSDDGNLF---AVEDVTSSKKRKDAD 180
Query: 191 GDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEG 250
D+ E D ++ KK RVVW+ +LH+KFV AVNQ+G DK PKKILDLMNV
Sbjct: 181 SKHDDK------ECLDPSSTKKARVVWSVDLHQKFVKAVNQIGFDKVGPKKILDLMNVPW 234
Query: 251 LTRENVASHLQKFRLYLKRLSNETPQ 276
LTRENVASHLQK+RLYL R+ E Q
Sbjct: 235 LTRENVASHLQKYRLYLSRIQKENDQ 260
>gi|56784051|dbj|BAD82798.1| putative response regulator 11 [Oryza sativa Japonica Group]
Length = 586
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 153/273 (56%), Positives = 183/273 (67%), Gaps = 14/273 (5%)
Query: 16 DIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVIS 75
D FP G+RVL VDDDPT LK+LE LR C YEVT A AL +LRE +N FD+VIS
Sbjct: 2 DATAFPYGLRVLVVDDDPTWLKILEKMLRKCSYEVTTCGLARVALDILRERKNKFDIVIS 61
Query: 76 DVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNI 135
DV+MPDMDGFKLLEH+GLEMDLPVIM+S G+T VMKG+ HGACDYLLKPVR++EL+NI
Sbjct: 62 DVNMPDMDGFKLLEHIGLEMDLPVIMMSIDGETSRVMKGVQHGACDYLLKPVRMKELRNI 121
Query: 136 WQHVIRRK--KVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDE 193
WQHV R+K +V + N + + EG SD + + RKRKD D D
Sbjct: 122 WQHVYRKKMHEVKEIEGNDSCDDLQILRNSFEGLDEKSLFMRSDSD--TMRKRKDVDKDH 179
Query: 194 DEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAV----PKKILDLMNVE 249
+ E+ D T KK RVVW+ +LH+KFV AVNQ+G D PKKILDLMNV
Sbjct: 180 AD------QESSDGNTVKKARVVWSVDLHQKFVNAVNQIGFDSECSPKGPKKILDLMNVP 233
Query: 250 GLTRENVASHLQKFRLYLKRLSNETPQAGMVAA 282
GLTRENVASHLQK+RLYL RL + + + AA
Sbjct: 234 GLTRENVASHLQKYRLYLSRLQKQNEERILGAA 266
>gi|414879149|tpg|DAA56280.1| TPA: putative two-component response regulator family protein [Zea
mays]
Length = 584
Score = 288 bits (737), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 153/271 (56%), Positives = 184/271 (67%), Gaps = 14/271 (5%)
Query: 16 DIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVIS 75
D FP G+RVL VDDDPT LK+LE LR C YEVT A A+++LRE RN FD+VIS
Sbjct: 5 DATAFPYGLRVLVVDDDPTWLKILEKMLRKCSYEVTTCGLASVAIQILRERRNKFDIVIS 64
Query: 76 DVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNI 135
DV+MPDMDGFKLLE +GLEMDLPVIM+S G+T VMKG+ HGACDYLLKPVR++EL+NI
Sbjct: 65 DVNMPDMDGFKLLELIGLEMDLPVIMMSIDGETSRVMKGVQHGACDYLLKPVRMKELRNI 124
Query: 136 WQHVIRRKKVGPKD---QNKLLNQENSRVGA-GEGGQGAMSTGNSDQNGKSNRKRKDQDG 191
WQHV R+K K+ + + + R G G + +SD + RKRKD +
Sbjct: 125 WQHVYRKKMHEVKEIEGNDSYDDLQMFRNGVEGFDERDLFMRADSD----TMRKRKDVNK 180
Query: 192 DEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGL 251
D + DG T KK RVVW+ +LH+KFV AVNQ+G DK PKKILDLMNV GL
Sbjct: 181 DHADQDSSDG------ATVKKARVVWSVDLHQKFVNAVNQIGFDKVGPKKILDLMNVPGL 234
Query: 252 TRENVASHLQKFRLYLKRLSNETPQAGMVAA 282
TRENVASHLQK+RLYL RL + + M AA
Sbjct: 235 TRENVASHLQKYRLYLSRLQKQNEERIMGAA 265
>gi|242070155|ref|XP_002450354.1| hypothetical protein SORBIDRAFT_05g004150 [Sorghum bicolor]
gi|241936197|gb|EES09342.1| hypothetical protein SORBIDRAFT_05g004150 [Sorghum bicolor]
Length = 694
Score = 288 bits (737), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 145/263 (55%), Positives = 187/263 (71%), Gaps = 8/263 (3%)
Query: 16 DIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENR--NNFDLV 73
D D FP G+RVLAVDDD CLK+LE L+ C Y TV A TAL MLRE + N FDLV
Sbjct: 2 DADTFPAGLRVLAVDDDRVCLKILERQLKYCNYNATVVTDARTALDMLRERKDGNQFDLV 61
Query: 74 ISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELK 133
ISDV MP+MDGFKLLE +GLEMDLPVIMLSA +T+ +MKGI HGACDY++KPVR+E+L+
Sbjct: 62 ISDVVMPNMDGFKLLELIGLEMDLPVIMLSANNETQTIMKGIKHGACDYIVKPVRLEQLR 121
Query: 134 NIWQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDE 193
IW HV++ K P++ N ++ + G + + D+N +NR++K ++
Sbjct: 122 GIWTHVVKNGKTDPRNTISSGNDDDVQ-KLPSGDELPSGDADKDENIAANRRKKYSKKNK 180
Query: 194 D--EDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGL 251
E D+D NE+++ QKK RV W +LHRKFV AV+Q+G+D AVPKKIL +MNVEGL
Sbjct: 181 RIVEVADED---NENTSAQKKQRVRWCGQLHRKFVEAVSQIGIDSAVPKKILKIMNVEGL 237
Query: 252 TRENVASHLQKFRLYLKRLSNET 274
TRENVASHLQK+R+YLK+L + T
Sbjct: 238 TRENVASHLQKYRIYLKKLGDGT 260
>gi|226503033|ref|NP_001152300.1| two-component response regulator ARR11 [Zea mays]
gi|195654849|gb|ACG46892.1| two-component response regulator ARR11 [Zea mays]
Length = 584
Score = 288 bits (737), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 153/271 (56%), Positives = 184/271 (67%), Gaps = 14/271 (5%)
Query: 16 DIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVIS 75
D FP G+RVL VDDDPT LK+LE LR C YEVT A A+++LRE RN FD+VIS
Sbjct: 5 DATAFPYGLRVLVVDDDPTWLKILEKMLRKCSYEVTTCGLASVAIQILRERRNKFDIVIS 64
Query: 76 DVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNI 135
DV+MPDMDGFKLLE +GLEMDLPVIM+S G+T VMKG+ HGACDYLLKPVR++EL+NI
Sbjct: 65 DVNMPDMDGFKLLELIGLEMDLPVIMMSIDGETSRVMKGVQHGACDYLLKPVRMKELRNI 124
Query: 136 WQHVIRRKKVGPKD---QNKLLNQENSRVGA-GEGGQGAMSTGNSDQNGKSNRKRKDQDG 191
WQHV R+K K+ + + + R G G + +SD + RKRKD +
Sbjct: 125 WQHVYRKKMHEVKEIEGNDSYDDLQMFRNGVEGFDERDLFMRADSD----TMRKRKDVNK 180
Query: 192 DEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGL 251
D + DG T KK RVVW+ +LH+KFV AVNQ+G DK PKKILDLMNV GL
Sbjct: 181 DHADQDSSDG------ATVKKARVVWSVDLHQKFVNAVNQIGFDKVGPKKILDLMNVPGL 234
Query: 252 TRENVASHLQKFRLYLKRLSNETPQAGMVAA 282
TRENVASHLQK+RLYL RL + + M AA
Sbjct: 235 TRENVASHLQKYRLYLSRLQKQNEERIMGAA 265
>gi|225456769|ref|XP_002274673.1| PREDICTED: two-component response regulator ARR11 [Vitis vinifera]
Length = 570
Score = 288 bits (737), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 149/258 (57%), Positives = 177/258 (68%), Gaps = 9/258 (3%)
Query: 18 DKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDV 77
+ FP G+RVL VDDDPT LK+LE L+ C YEVT A AL MLRE ++ FD+VISDV
Sbjct: 11 EAFPAGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCCLARDALNMLRERKDGFDIVISDV 70
Query: 78 HMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQ 137
+MPDMDGFKLLEHVGLEMDLPVIM+S G+T VMKG+ HGACDYLLKPVR++ELKNIWQ
Sbjct: 71 NMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPVRMKELKNIWQ 130
Query: 138 HVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGK--SNRKRKDQDGDEDE 195
HV R+K KD ++ + G+ G+ + RKRKD E
Sbjct: 131 HVFRKKIHEGKDVESYECMREIQMIMSRSDE--FDDGHQLNGGELGATRKRKDM-----E 183
Query: 196 DGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTREN 255
+ D E D ++ KK RVVW+ +LH+KFV AVNQ+G DK PKKILDLMNV LTREN
Sbjct: 184 NRRHDDQELVDPSSSKKARVVWSIDLHQKFVDAVNQIGFDKVGPKKILDLMNVPWLTREN 243
Query: 256 VASHLQKFRLYLKRLSNE 273
VASHLQK+RLYL RL E
Sbjct: 244 VASHLQKYRLYLSRLQKE 261
>gi|356538109|ref|XP_003537547.1| PREDICTED: two-component response regulator ARR11-like [Glycine
max]
Length = 585
Score = 288 bits (736), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 148/279 (53%), Positives = 184/279 (65%), Gaps = 10/279 (3%)
Query: 11 GCEDGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNF 70
GC FP G+RVL VDDDPT LK+LE L+ C YEVT A AL +LRE ++ +
Sbjct: 4 GCFSSPRRDFPAGLRVLVVDDDPTWLKILEKMLKKCNYEVTTCCLARHALSLLRERKDGY 63
Query: 71 DLVISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIE 130
D+VISDV+MPDMDGFKLLEHVGLEMDLPVIM+S G+T VMKG+ HGACDYLLKP+R++
Sbjct: 64 DIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMK 123
Query: 131 ELKNIWQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGN--SDQNGKSNRKRKD 188
EL+NIWQHV+R++ K+ + + G GN + ++ S +KRKD
Sbjct: 124 ELRNIWQHVLRKRIHEAKEFES--FESFESIHLMRNGSELSDDGNLFAVEDVTSTKKRKD 181
Query: 189 QDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNV 248
D D+ E D ++ KK RVVW+ +LH+KFV AVNQ+G DK PKKILDLMNV
Sbjct: 182 ADNKHDDK------ECLDPSSTKKARVVWSVDLHQKFVKAVNQIGFDKVGPKKILDLMNV 235
Query: 249 EGLTRENVASHLQKFRLYLKRLSNETPQAGMVAALGSKD 287
LTRENVASHLQK+RLYL R+ E Q + L D
Sbjct: 236 PWLTRENVASHLQKYRLYLSRIQKENDQRSSSSGLKHSD 274
>gi|356510875|ref|XP_003524159.1| PREDICTED: two-component response regulator ARR11-like [Glycine
max]
Length = 584
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 159/319 (49%), Positives = 201/319 (63%), Gaps = 14/319 (4%)
Query: 18 DKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDV 77
D FP G+RVL VDDDPT L++LE L+ C YEVT A ALK LRE ++ +D+VISDV
Sbjct: 12 DAFPAGLRVLVVDDDPTWLRILEKMLKKCLYEVTTCCLATEALKKLRERKDAYDIVISDV 71
Query: 78 HMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQ 137
+MPDMDGFKLLE VGLEMDLPVIM+S G+T VMKG+ HGACDYLLKP+R++EL+NIWQ
Sbjct: 72 NMPDMDGFKLLEQVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQ 131
Query: 138 HVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGN--SDQNGKSNRKRKDQDGDEDE 195
HV R++ +D + + G GN + + S +KRKD D D+
Sbjct: 132 HVFRKRMHEARDFESHEGFDFEGIHLMRNGSDHSDDGNLFAVEEITSIKKRKDADNKHDD 191
Query: 196 DGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTREN 255
E D + KK RVVW+ +LH+KFV AVNQ+G DK PKKILDLMNV LTREN
Sbjct: 192 ------KEFGDHSPMKKARVVWSVDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTREN 245
Query: 256 VASHLQKFRLYLKRLSNETPQAGMVAALGSKDSSYLRIGALDGFGDLRSLNSPGRLSSSA 315
VASHLQK+RLYL RL E Q + + DS G+ F L + N + + A
Sbjct: 246 VASHLQKYRLYLSRLQKENDQKSSSSGIKHSDSPSKDPGS---FSILDTANK--QQNDVA 300
Query: 316 ISS-SYVPGNMFGRFNSTS 333
I S SY G++ + ++TS
Sbjct: 301 IDSFSYSDGSLLLQMDATS 319
>gi|297733626|emb|CBI14873.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 148/256 (57%), Positives = 171/256 (66%), Gaps = 35/256 (13%)
Query: 18 DKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDV 77
+ FP G+RVL VDDDPT LK+LE L+ C YEVT A AL MLRE ++ FD+VISDV
Sbjct: 11 EAFPAGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCCLARDALNMLRERKDGFDIVISDV 70
Query: 78 HMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQ 137
+MPDMDGFKLLEHVGLEMDLPVIM+S G+T VMKG+ HGACDYLLKPVR++ELKNIWQ
Sbjct: 71 NMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPVRMKELKNIWQ 130
Query: 138 HVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDG 197
HV R+K E +GA RKRKD E+
Sbjct: 131 HVFRKKI-----------HEGKDLGA-------------------TRKRKDM-----ENR 155
Query: 198 DDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVA 257
D E D ++ KK RVVW+ +LH+KFV AVNQ+G DK PKKILDLMNV LTRENVA
Sbjct: 156 RHDDQELVDPSSSKKARVVWSIDLHQKFVDAVNQIGFDKVGPKKILDLMNVPWLTRENVA 215
Query: 258 SHLQKFRLYLKRLSNE 273
SHLQK+RLYL RL E
Sbjct: 216 SHLQKYRLYLSRLQKE 231
>gi|302815333|ref|XP_002989348.1| hypothetical protein SELMODRAFT_447635 [Selaginella moellendorffii]
gi|300142926|gb|EFJ09622.1| hypothetical protein SELMODRAFT_447635 [Selaginella moellendorffii]
Length = 470
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 160/313 (51%), Positives = 207/313 (66%), Gaps = 26/313 (8%)
Query: 16 DIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVIS 75
D + FPIGMRVL VDDDP CL +L+ L C+Y VT ++AV AL++LRE + FDLVIS
Sbjct: 7 DGEGFPIGMRVLVVDDDPLCLLLLKKMLLQCKYHVTACSRAVEALQLLREKKFQFDLVIS 66
Query: 76 DVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNI 135
DV+MPDMDGFKLLE +GLEMDLPVIM+S G+T +VM+GITHGACDYLLKPVRIEEL+NI
Sbjct: 67 DVYMPDMDGFKLLELIGLEMDLPVIMMSGNGETSVVMEGITHGACDYLLKPVRIEELRNI 126
Query: 136 WQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDE 195
WQHV+R++ +R A E G + +++KRK++D D
Sbjct: 127 WQHVVRKR--------------GAREAAKEESSGEWDDSSEKFPEYTSKKRKEKDAD-SS 171
Query: 196 DGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTREN 255
GD+ + ED + KK RVVW+ +LHR FV AVNQLGV+KAVPK+IL++MNV+GLTREN
Sbjct: 172 GGDE---QIEDISGLKKARVVWSGDLHRLFVKAVNQLGVEKAVPKRILEIMNVQGLTREN 228
Query: 256 VASHLQKFRLYLKRLSNETPQAGMVAALGSKDSSYLRIGALDGFGDLRSLNSPGRLSSSA 315
VASHLQK+RL LKRLS + +A+ + +S FG + G SS
Sbjct: 229 VASHLQKYRLGLKRLSGVDMEPHPIASFQADESG--------SFGGSMFVRPAGSSKSSI 280
Query: 316 ISSSYVPGNMFGR 328
++ G +FG+
Sbjct: 281 ARTTSCAGGVFGK 293
>gi|357463135|ref|XP_003601849.1| Response regulator [Medicago truncatula]
gi|355490897|gb|AES72100.1| Response regulator [Medicago truncatula]
Length = 570
Score = 286 bits (731), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 147/279 (52%), Positives = 186/279 (66%), Gaps = 10/279 (3%)
Query: 11 GCEDGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNF 70
GC FP G+RVL VDDDPT LK+LE L+ C YEVT A AL +LRE ++ +
Sbjct: 4 GCFSSPRRDFPAGLRVLVVDDDPTWLKILEKMLKKCNYEVTTCCLARHALSLLRERKDGY 63
Query: 71 DLVISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIE 130
D+VISDV+MPDMDGFKLLEHVGLEMDLPVIM+S G+T VMKG+ HGACDYLLKP+R++
Sbjct: 64 DIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMK 123
Query: 131 ELKNIWQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGN--SDQNGKSNRKRKD 188
EL+NIWQHV R++ ++ + E+ + G GN + ++ S +KRKD
Sbjct: 124 ELRNIWQHVFRKRIHEVREFENFESFESMHL--MRNGSEMSEEGNLFALEDMTSTKKRKD 181
Query: 189 QDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNV 248
D D+ E DS++ KK RVVW+ +LH+KFV AVNQ+G DK PKKILDLMNV
Sbjct: 182 VDSRHDD------KEFLDSSSSKKARVVWSVDLHQKFVKAVNQIGFDKVGPKKILDLMNV 235
Query: 249 EGLTRENVASHLQKFRLYLKRLSNETPQAGMVAALGSKD 287
L+RENVASHLQK+RLYL RL + Q + + D
Sbjct: 236 PWLSRENVASHLQKYRLYLSRLQKDNEQKSSSSGMKHSD 274
>gi|225425924|ref|XP_002267616.1| PREDICTED: two-component response regulator ARR11 [Vitis vinifera]
gi|297738324|emb|CBI27525.3| unnamed protein product [Vitis vinifera]
Length = 594
Score = 285 bits (729), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 148/270 (54%), Positives = 186/270 (68%), Gaps = 14/270 (5%)
Query: 7 MGSAGCEDGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLREN 66
M SA C D FP G+RVL VDDDPT LK+LE L+ C YEVT+ A AL +LRE
Sbjct: 1 MDSAFCP-PRTDVFPAGLRVLVVDDDPTWLKILEKMLKKCLYEVTICGLARDALNLLRER 59
Query: 67 RNNFDLVISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKP 126
++ +D+VISDV+MPDMDGFKLLE VGLEMDLPVIM+S G+T VMKG+ HGACDYLLKP
Sbjct: 60 KDGYDIVISDVNMPDMDGFKLLELVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKP 119
Query: 127 VRIEELKNIWQHVIRRKKVGPKD---QNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSN 183
+R++EL+NIWQHV R+K +D + + + R G + G + +G+ S
Sbjct: 120 IRMKELRNIWQHVFRKKINEVRDIESHESIDDFQIMRNGPEQSDDGYLVSGDP----TSV 175
Query: 184 RKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKIL 243
+KRKD + D+ ++ D ++ KK RVVW+ +LH+KFV AVNQ+G DK PKKIL
Sbjct: 176 KKRKDTENKHDD------RDHCDPSSVKKARVVWSVDLHQKFVRAVNQIGFDKVGPKKIL 229
Query: 244 DLMNVEGLTRENVASHLQKFRLYLKRLSNE 273
DLMNV LTRENVASHLQK+RLYL RL E
Sbjct: 230 DLMNVPWLTRENVASHLQKYRLYLSRLQKE 259
>gi|302798186|ref|XP_002980853.1| type B response regulator [Selaginella moellendorffii]
gi|300151392|gb|EFJ18038.1| type B response regulator [Selaginella moellendorffii]
Length = 470
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 160/313 (51%), Positives = 206/313 (65%), Gaps = 26/313 (8%)
Query: 16 DIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVIS 75
D + FPIGMRVL VDDDP CL +L+ L C+Y VT ++AV AL++LRE + FDLVIS
Sbjct: 7 DGEGFPIGMRVLVVDDDPLCLLLLKKMLLQCKYHVTACSRAVEALQLLREKKFQFDLVIS 66
Query: 76 DVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNI 135
DV+MPDMDGFKLLE +GLEMDLPVIM+S G+T +VM+GITHGACDYLLKPVRIEEL+NI
Sbjct: 67 DVYMPDMDGFKLLELIGLEMDLPVIMMSGNGETSVVMEGITHGACDYLLKPVRIEELRNI 126
Query: 136 WQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDE 195
WQHV+R++ ++ A E G + +++KRKD+D D
Sbjct: 127 WQHVVRKR--------------GAKEAAKEESSGEWDDSSEKFPEYTSKKRKDKDADS-S 171
Query: 196 DGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTREN 255
GDD ED + KK RVVW+ +LHR FV AVNQLGV+KAVPK+IL++M+V+GLTREN
Sbjct: 172 GGDD---PIEDMSGLKKARVVWSGDLHRLFVKAVNQLGVEKAVPKRILEIMSVQGLTREN 228
Query: 256 VASHLQKFRLYLKRLSNETPQAGMVAALGSKDSSYLRIGALDGFGDLRSLNSPGRLSSSA 315
VASHLQK+RL LKRLS + +A+ + +S FG + G SS
Sbjct: 229 VASHLQKYRLGLKRLSGVDMEPHPIASFQADESG--------SFGGSMFVRPAGSSKSSI 280
Query: 316 ISSSYVPGNMFGR 328
++ G +FG+
Sbjct: 281 ARTTSCAGGVFGK 293
>gi|302799824|ref|XP_002981670.1| hypothetical protein SELMODRAFT_115021 [Selaginella moellendorffii]
gi|300150502|gb|EFJ17152.1| hypothetical protein SELMODRAFT_115021 [Selaginella moellendorffii]
Length = 413
Score = 284 bits (727), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 143/280 (51%), Positives = 195/280 (69%), Gaps = 19/280 (6%)
Query: 17 IDKF-PIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVIS 75
+D F P G++VL VDDDP CL +LE LR C+Y VT ++A AL +LRE + +FD+VIS
Sbjct: 1 MDHFSPTGLKVLVVDDDPCCLTLLERMLRECKYAVTTCSRATAALTILRERKESFDVVIS 60
Query: 76 DVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNI 135
DVHMPDMDGFKLLE +GLEM +PVIM+SA G+T VMKG+ +GACDYL+KPVRIEEL+NI
Sbjct: 61 DVHMPDMDGFKLLELIGLEMGIPVIMMSASGETDAVMKGVVYGACDYLVKPVRIEELRNI 120
Query: 136 WQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSN------RKRKDQ 189
WQHV+RR+ KD R A E + M + +D + +++ RK+K
Sbjct: 121 WQHVVRRRT---KDS-------AVRDEAPEEWEDFMRSTPTDSSEEADVDLRLLRKKKRP 170
Query: 190 DGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVE 249
D G D+ + + KK RVVW+ +LH++FV A+N +G++KAVPK+IL++MN++
Sbjct: 171 SCDFGGGGGDESMRS--IASNKKARVVWSFDLHQQFVKAINHIGIEKAVPKRILEVMNIQ 228
Query: 250 GLTRENVASHLQKFRLYLKRLSNETPQAGMVAALGSKDSS 289
GLTRENVASHLQK+RLYLKRLS TP+ +A+ + + +
Sbjct: 229 GLTRENVASHLQKYRLYLKRLSGVTPEPFPIASFQAYEGA 268
>gi|302768857|ref|XP_002967848.1| type B response regulator [Selaginella moellendorffii]
gi|300164586|gb|EFJ31195.1| type B response regulator [Selaginella moellendorffii]
Length = 414
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 143/280 (51%), Positives = 195/280 (69%), Gaps = 19/280 (6%)
Query: 17 IDKF-PIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVIS 75
+D F P G++VL VDDDP CL +LE LR C+Y VT ++A AL +LRE + +FD+VIS
Sbjct: 1 MDHFSPTGLKVLVVDDDPCCLTLLERMLRECKYAVTTCSRATAALTILRERKESFDVVIS 60
Query: 76 DVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNI 135
DVHMPDMDGFKLLE +GLEM +PVIM+SA G+T VMKG+ +GACDYL+KPVRIEEL+NI
Sbjct: 61 DVHMPDMDGFKLLELIGLEMGIPVIMMSASGETDAVMKGVVYGACDYLVKPVRIEELRNI 120
Query: 136 WQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSN------RKRKDQ 189
WQHV+RR+ KD R A E + M + +D + +++ RK+K
Sbjct: 121 WQHVVRRRT---KDS-------AVRDEAPEEWEDFMRSTPTDSSEEADVDLRLLRKKKRP 170
Query: 190 DGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVE 249
D G D+ + + KK RVVW+ +LH++FV A+N +G++KAVPK+IL++MN++
Sbjct: 171 SCDFGGGGGDESVRS--IASNKKARVVWSFDLHQQFVKAINHIGIEKAVPKRILEVMNIQ 228
Query: 250 GLTRENVASHLQKFRLYLKRLSNETPQAGMVAALGSKDSS 289
GLTRENVASHLQK+RLYLKRLS TP+ +A+ + + +
Sbjct: 229 GLTRENVASHLQKYRLYLKRLSGVTPEPFPIASFQAYEGA 268
>gi|312282885|dbj|BAJ34308.1| unnamed protein product [Thellungiella halophila]
Length = 380
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 147/313 (46%), Positives = 211/313 (67%), Gaps = 26/313 (8%)
Query: 18 DKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDV 77
D+FP G+RVL VDDD +CL++LE L Y+VT+ +QA AL +LRE + FDLV+SDV
Sbjct: 5 DQFPSGLRVLVVDDDTSCLRILEQMLLRLMYQVTICSQADVALNILRERKGCFDLVLSDV 64
Query: 78 HMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQ 137
HMP M+G+KLL+ VGLEMDLPVIM+S G T VMKGI HGACDYL+KP+R EELKNIWQ
Sbjct: 65 HMPGMNGYKLLQQVGLEMDLPVIMMSVDGRTTTVMKGINHGACDYLIKPIRPEELKNIWQ 124
Query: 138 HVIRRKKVGPKD--QNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDE 195
HV+RRK K+ +N ++N + ++S + + + N++R D++ +E++
Sbjct: 125 HVVRRKWTMNKELQRNSQALEDNKNSSSSLETVFSVSECSEESKLRKNKRRVDREDNEED 184
Query: 196 DGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTREN 255
D D G+ + KK RVVW+ ELH++F AVN LG++KAVPK+IL+LMNV GL+REN
Sbjct: 185 DLLDPGNNS------KKSRVVWSIELHQQFASAVNHLGIEKAVPKRILELMNVPGLSREN 238
Query: 256 VASHLQKFRLYLKRLSNETPQAGMVAALGSKDSSYLRIGALDGFGDLRSLNSPGRLSSSA 315
VASHLQK+RLYL+RLS G+ + + +S ++ + ++++L S G++
Sbjct: 239 VASHLQKYRLYLRRLS-----GGVASQIRDTES-------MERYENIQALVSSGQIPPQT 286
Query: 316 ISSSYVPGNMFGR 328
+++ +FGR
Sbjct: 287 LAA------LFGR 293
>gi|224110806|ref|XP_002315642.1| type-b response regulator [Populus trichocarpa]
gi|222864682|gb|EEF01813.1| type-b response regulator [Populus trichocarpa]
Length = 250
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 150/256 (58%), Positives = 180/256 (70%), Gaps = 12/256 (4%)
Query: 18 DKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDV 77
D FP G+RVL VDDDPT LK+LE L+ C YEVT A AL +LRE + +D+VISDV
Sbjct: 4 DSFPAGLRVLVVDDDPTWLKILEKMLKRCSYEVTTCGLARDALNLLRERKGGYDIVISDV 63
Query: 78 HMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQ 137
+MPDMDGFKLLEHVGLEMDLPVIM+S G+T VMKG+ HGACDYLLKP+R++EL+NIWQ
Sbjct: 64 YMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQ 123
Query: 138 HVIRRKKVGPKDQNKLLNQEN---SRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDED 194
HV R+K +D L E+ +R G+ G G ++ +KRKD + D
Sbjct: 124 HVFRKKIHEVRDIEILEGIESFQMTRNGSDLYEDGHFLCG---EDLTLIKKRKDIESKHD 180
Query: 195 EDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRE 254
E D G D+T+ KK RVVW+ ELH+KFV AVNQ+G DK PKKILDLMNV LTRE
Sbjct: 181 E--KDIG----DNTSAKKARVVWSVELHQKFVKAVNQIGFDKVGPKKILDLMNVPRLTRE 234
Query: 255 NVASHLQKFRLYLKRL 270
NVASHLQK+RLYL RL
Sbjct: 235 NVASHLQKYRLYLSRL 250
>gi|388504468|gb|AFK40300.1| unknown [Medicago truncatula]
Length = 570
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 146/279 (52%), Positives = 185/279 (66%), Gaps = 10/279 (3%)
Query: 11 GCEDGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNF 70
GC FP G+RVL VDDDPT LK+LE L+ C YEVT A AL +LRE ++ +
Sbjct: 4 GCFPSPRRDFPAGLRVLVVDDDPTWLKILEKMLKKCNYEVTTCCLARHALSLLRERKDGY 63
Query: 71 DLVISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIE 130
D+VISDV+MPDMDGFKLL HVGLEMDLPVIM+S G+T VMKG+ HGACDYLLKP+R++
Sbjct: 64 DIVISDVNMPDMDGFKLLGHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMK 123
Query: 131 ELKNIWQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGN--SDQNGKSNRKRKD 188
EL+NIWQHV R++ ++ + E+ + G GN + ++ S +KRKD
Sbjct: 124 ELRNIWQHVFRKRIHEAREFENFESFESMHL--MRNGSEMSEEGNLFALEDMTSTKKRKD 181
Query: 189 QDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNV 248
D D+ E DS++ KK RVVW+ +LH+KFV AVNQ+G DK PKKILDLMNV
Sbjct: 182 VDSRHDD------KEFLDSSSSKKARVVWSVDLHQKFVKAVNQIGFDKVGPKKILDLMNV 235
Query: 249 EGLTRENVASHLQKFRLYLKRLSNETPQAGMVAALGSKD 287
L+RENVASHLQK+RLYL RL + Q + + D
Sbjct: 236 PWLSRENVASHLQKYRLYLSRLQKDNEQKSSSSGMKHSD 274
>gi|168004846|ref|XP_001755122.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693715|gb|EDQ80066.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 338
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 149/251 (59%), Positives = 185/251 (73%), Gaps = 9/251 (3%)
Query: 18 DKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDV 77
D+FP+GMRVL VDD+PTCL +LE L C Y VT +A AL MLRE+ FD+VISDV
Sbjct: 48 DEFPVGMRVLVVDDNPTCLMILEQMLVRCAYRVTTCGKATEALSMLREDIGKFDVVISDV 107
Query: 78 HMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQ 137
MPDMDGFKLLE VGLEMDLPVIM+S G+T VMKGITHGACDYLLKPVRIEEL+NIWQ
Sbjct: 108 DMPDMDGFKLLELVGLEMDLPVIMVSGNGETSAVMKGITHGACDYLLKPVRIEELRNIWQ 167
Query: 138 HVIRRKK-----VGPKDQNKLLNQENSRVGAG--EGGQGAMSTGNSDQNGKSNRKRKDQD 190
HV+R+K+ V K + E + G G + + +T +D N K ++RK +
Sbjct: 168 HVVRKKRREVKAVATKSVEEAGGCERPKRGGGADDADYTSSATDTTDSNWKLTKRRKGE- 226
Query: 191 GDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEG 250
+DE+ +D+ EN+D +T K+PRVVW+ ELH++FV AVNQLG+DKAVPK+IL+LM V+G
Sbjct: 227 -FKDENEEDNEQENDDPSTLKRPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMGVQG 285
Query: 251 LTRENVASHLQ 261
LTRENVASHLQ
Sbjct: 286 LTRENVASHLQ 296
>gi|303287506|ref|XP_003063042.1| g2-like myb-transcription factor with a n-terminal response
regulator receiver domain [Micromonas pusilla CCMP1545]
gi|226455678|gb|EEH52981.1| g2-like myb-transcription factor with a n-terminal response
regulator receiver domain [Micromonas pusilla CCMP1545]
Length = 544
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 151/309 (48%), Positives = 193/309 (62%), Gaps = 48/309 (15%)
Query: 1 MTAEERMGSAGCEDGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTAL 60
MTAE++ ++ FP G+RVL VDDDP CL+++E L+ CQYEVT ++ AL
Sbjct: 1 MTAEKK---------ELKVFPAGLRVLVVDDDPLCLRIVEKMLKRCQYEVTTFSRGAEAL 51
Query: 61 KMLRENRNNFDLVISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGAC 120
+ LR R++FD+V+SDVHMPDMDGFKLLEH+ LE+D+PV+M+SA T +V++GI HGA
Sbjct: 52 ETLRARRDDFDIVLSDVHMPDMDGFKLLEHIALELDVPVMMMSANCATDVVLRGIIHGAV 111
Query: 121 DYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQN- 179
DYLLKPVR+EEL+NIWQHV+RR++ KD S G A + D N
Sbjct: 112 DYLLKPVRLEELRNIWQHVVRRQREPSKDGAAGKGGGASGAPEVSGDTHANTDDKQDGNA 171
Query: 180 ----GKSNRKR---------------------------------KDQDGDEDEDGDDDGH 202
G ++KR K + D E G
Sbjct: 172 TDSKGSGSQKRKSGKSGDDGGKDGGGSGGKDGDASNKGNNNKRKKGKSNDATETAGGAGV 231
Query: 203 ENEDSTTQ-KKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQ 261
E+ D T+ KKPRVVW+PELH++FV AVNQLG+DKAVPK+ILDLM V+GLTRENVASHLQ
Sbjct: 232 EDNDDTSGLKKPRVVWSPELHQQFVTAVNQLGIDKAVPKRILDLMGVQGLTRENVASHLQ 291
Query: 262 KFRLYLKRL 270
K+RLYLKRL
Sbjct: 292 KYRLYLKRL 300
>gi|168002194|ref|XP_001753799.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695206|gb|EDQ81551.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 311
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 146/255 (57%), Positives = 181/255 (70%), Gaps = 9/255 (3%)
Query: 18 DKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDV 77
D FP G+RVL VDD+P L VLE L C Y VT +A AL +LRE+ + FDLVISDV
Sbjct: 44 DAFPAGLRVLVVDDEPVTLMVLEKMLTNCSYRVTTCGRATDALCLLREDIDKFDLVISDV 103
Query: 78 HMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQ 137
+MPDMDGFKLLE VGLEMDLPVIM+S G+T VMKGITHGACDYLLKPVR +EL+NIWQ
Sbjct: 104 NMPDMDGFKLLELVGLEMDLPVIMMSGNGETSAVMKGITHGACDYLLKPVRQKELRNIWQ 163
Query: 138 HVIRRKKVGPKDQNKLLNQENSRVGAGEGGQG-------AMSTGNS-DQNGKSNRKRKDQ 189
HV+R+++ K + + E V E G + +TG++ D N + RK ++Q
Sbjct: 164 HVVRKRRQDVKIARETKSVEEGGVCVREKRTGPDDVDYTSSATGDTGDGNWRKKRKGENQ 223
Query: 190 DGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVE 249
+DE +D EN+D +T KKPRVVW+ ELH++FV AVNQLG+D+AVPK+IL+LM V
Sbjct: 224 TF-KDETEEDVEQENDDPSTMKKPRVVWSVELHQQFVSAVNQLGIDRAVPKRILELMGVH 282
Query: 250 GLTRENVASHLQKFR 264
GLTRENVASHLQ R
Sbjct: 283 GLTRENVASHLQVIR 297
>gi|242085174|ref|XP_002443012.1| hypothetical protein SORBIDRAFT_08g006300 [Sorghum bicolor]
gi|241943705|gb|EES16850.1| hypothetical protein SORBIDRAFT_08g006300 [Sorghum bicolor]
Length = 551
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 164/345 (47%), Positives = 217/345 (62%), Gaps = 30/345 (8%)
Query: 16 DIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENR--NNFDLV 73
D D FP G+RVLAVDDD CLK+LE L+ C Y TV + A TAL MLRE + N FDLV
Sbjct: 2 DADTFPAGLRVLAVDDDRVCLKILERQLKYCNYNATVVSDARTALDMLRERKEGNQFDLV 61
Query: 74 ISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELK 133
ISDV MP+MDGFKLLE +GLEMDLPVIMLSA +T+ +MKGI HGACDY++KPVR+E+L+
Sbjct: 62 ISDVIMPNMDGFKLLELIGLEMDLPVIMLSANSETQTIMKGIKHGACDYMVKPVRLEQLR 121
Query: 134 NIWQHVIRRKKVGPKDQ-NKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQD-G 191
IW HV++ P++ N + + ++ G G +G M G + +N S + +K D
Sbjct: 122 GIWTHVVKNSMNDPQNNINSGSDDDVQKLRYGNGDKG-MKDGANHRNKYSKKNKKVVDVA 180
Query: 192 DEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGL 251
DED +E+++ QKK RV W +LH+KFV AV+Q+G+D+A PKKIL +MNVEGL
Sbjct: 181 DED---------SENTSAQKKQRVQWCGQLHQKFVEAVSQIGIDRAAPKKILAIMNVEGL 231
Query: 252 TRENVASHLQKFRLYLKRLS-----NETPQAGMVAALGSKDSSYLRIGALDGFGDLRSLN 306
TRENVASHLQK+R+YL++L N P A AL IG+ R+ +
Sbjct: 232 TRENVASHLQKYRIYLRKLGDGKLRNSNPFADETEALRGNMYGPTFIGSPRS----RNHS 287
Query: 307 SPGRLSSSAISSSYVPGNMFGRFNSTSGLSMHGIASSGMIQP-GH 350
P SS A S + G + G S+ G+ IA+ ++ P GH
Sbjct: 288 LPRSCSSYA---SILRGKILG---SSRGIPYEDIANGDILAPSGH 326
>gi|413954817|gb|AFW87466.1| putative two-component response regulator family protein [Zea mays]
Length = 671
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 143/267 (53%), Positives = 186/267 (69%), Gaps = 22/267 (8%)
Query: 16 DIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENR--NNFDLV 73
D D FP+G+RVLAVDDD CLK+LE L+ C Y TV A TAL MLRE + N FDLV
Sbjct: 2 DADTFPVGLRVLAVDDDRVCLKILERQLKCCNYNTTVVTDAQTALDMLRERKDGNQFDLV 61
Query: 74 ISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELK 133
ISDV M MDGFKLLE +GLEMDLPVIMLSA +T+ +MKGI HGACDY++KPVR+E+L+
Sbjct: 62 ISDVVMTKMDGFKLLELIGLEMDLPVIMLSANSETQTIMKGIKHGACDYMVKPVRLEQLR 121
Query: 134 NIWQHVIRRKKVGPK-----DQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKD 188
IW HV++ K+ P+ D + ++ ++ +G+G +G G + Q + +K
Sbjct: 122 GIWTHVVKNSKIDPRNNIGSDSDDVV----QKLPSGDGDKGE-KVGETRQKKYPKKNKKT 176
Query: 189 QD-GDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMN 247
D DED NE ++ QKK RV W ELH+KFV AV Q+G+D+AVPKKIL++M+
Sbjct: 177 VDVADED---------NEKTSAQKKQRVQWCGELHQKFVQAVRQIGIDRAVPKKILEIMD 227
Query: 248 VEGLTRENVASHLQKFRLYLKRLSNET 274
VEGLTRENVASHLQK+R+YL++L + T
Sbjct: 228 VEGLTRENVASHLQKYRIYLRKLGDGT 254
>gi|298103724|emb|CBM42563.1| putative B-type response regulator 21 [Populus x canadensis]
Length = 563
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 153/306 (50%), Positives = 192/306 (62%), Gaps = 44/306 (14%)
Query: 18 DKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDV 77
D FP G+RVL VDDDPT LK+LE L+ C YEVT A AL +LRE + +D+VISDV
Sbjct: 11 DSFPAGLRVLVVDDDPTWLKILEKMLKRCSYEVTTCGLARDALNLLRERKGGYDIVISDV 70
Query: 78 HMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQ 137
MPDMDGFKLLEHVGLEMDLPVIM+S G+T VMKG+ HGACDYLLKP+R++EL+NIWQ
Sbjct: 71 FMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQ 130
Query: 138 HVIRRKKVGPKDQNKLLNQEN---SRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDED 194
HV R+K +D L E+ +R G+ + G G ++ +KRKD + D
Sbjct: 131 HVFRKKIHEVRDIEILEGIESFQMTRNGSDQYEDGHFLCG---EDLTLIKKRKDIESKHD 187
Query: 195 EDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVD------------------K 236
E +N D+T+ KK RVVW+ ELH+KFV AVNQ+G D +
Sbjct: 188 E------KDNGDNTSAKKARVVWSVELHQKFVKAVNQIGFDTTSLSCFYRAMTSNVCLAE 241
Query: 237 AVPKKILDLMNVEGLTRENVASHLQKFRLYLKRL--------------SNETPQAGMVAA 282
PKKILDLMNV LTRENVASHLQK+RLYL RL +++P + V +
Sbjct: 242 VGPKKILDLMNVPRLTRENVASHLQKYRLYLSRLQKGNDFNNPVGMIKQSDSPLSDSVGS 301
Query: 283 LGSKDS 288
GS++S
Sbjct: 302 FGSQNS 307
>gi|145340805|ref|XP_001415508.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144575731|gb|ABO93800.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 270
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 136/264 (51%), Positives = 177/264 (67%), Gaps = 5/264 (1%)
Query: 20 FPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM 79
FP G+ VL VDDD CLKV+E L+AC+Y+VT + A TAL++LR + FD+V+SDVHM
Sbjct: 1 FPAGLGVLVVDDDLLCLKVVEKMLKACKYKVTACSTAKTALEILRTRKEEFDIVLSDVHM 60
Query: 80 PDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
PDMDGFKLLE + E+ LPV+M+SA D+ +V++GI HGA DYLLKPVRIEEL+NIWQHV
Sbjct: 61 PDMDGFKLLEIIQFELALPVLMMSANSDSSVVLRGIIHGAVDYLLKPVRIEELRNIWQHV 120
Query: 140 IRR-----KKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDED 194
+RR K G +D + ++ + S+ + RK+
Sbjct: 121 VRRDYSSAKSSGSEDVEASSPSKRAKTSGSNSKSEEVDRTASEMSSGKARKKPTGKKGGK 180
Query: 195 EDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRE 254
+ + + D++ KKPRVVW+ ELH +FV AVNQLG+DKAVPK+ILDLM V+GLTRE
Sbjct: 181 SVKEAEKKDVVDNSNSKKPRVVWSAELHAQFVTAVNQLGIDKAVPKRILDLMGVQGLTRE 240
Query: 255 NVASHLQKFRLYLKRLSNETPQAG 278
NVASHLQK+RLYLKRL + G
Sbjct: 241 NVASHLQKYRLYLKRLQGNDARGG 264
>gi|413951616|gb|AFW84265.1| putative two-component response regulator family protein [Zea mays]
Length = 598
Score = 275 bits (703), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 151/296 (51%), Positives = 180/296 (60%), Gaps = 49/296 (16%)
Query: 15 GDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYE------------------VTVTNQA 56
D FP G+RVL VDDDPT LK+LE LR C YE VT A
Sbjct: 4 ADATAFPYGLRVLVVDDDPTWLKILEKMLRKCSYEDAMSDRTVIARTGGISSCVTTCGLA 63
Query: 57 VTALKMLRENRNNFDLVISDVHMPDMDGFKLLEHVGLEMDLPVI----------MLSAYG 106
AL++LRE RN FD+VISDV+MPDMDGFKLLE +GLEMDLPVI ++S G
Sbjct: 64 SVALQILRERRNKFDIVISDVNMPDMDGFKLLELIGLEMDLPVISTKLLQSVSTVMSIDG 123
Query: 107 DTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRVGAGEG 166
+T VMKG+ HGACDYLLKPVR++EL+NIWQHV R+K E + G
Sbjct: 124 ETSRVMKGVHHGACDYLLKPVRMKELRNIWQHVYRKKM-----------HEVKEIEDGLD 172
Query: 167 GQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFV 226
+G ++D + RKRK+ D D + DG T KK RVVW+ +LH+KFV
Sbjct: 173 ERGLFMRADTD----TMRKRKEVDKDHADQDSSDG------ATAKKARVVWSVDLHQKFV 222
Query: 227 GAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKRLSNETPQAGMVAA 282
AVNQ+G DK PKKILDLMNV GLTRENVASHLQK+RLYL RL + + M AA
Sbjct: 223 NAVNQIGFDKVGPKKILDLMNVHGLTRENVASHLQKYRLYLSRLQKQNEERIMGAA 278
>gi|298103728|emb|CBM42565.1| putative B-type response regulator 14 [Populus x canadensis]
Length = 594
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 147/277 (53%), Positives = 181/277 (65%), Gaps = 30/277 (10%)
Query: 18 DKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDV 77
D FP G+RVL VDDDPT LK+LE L+ C YEVT A AL +LRE + +D+VISDV
Sbjct: 12 DSFPAGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLARDALNLLRERKGGYDIVISDV 71
Query: 78 HMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQ 137
+MPDMDGFKLLE VGLEMDLPVIM+S G+T VMKG+ HGACDYLLKP+R++EL+NIWQ
Sbjct: 72 YMPDMDGFKLLEQVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQ 131
Query: 138 HVIRRKKVGPKDQNKLLNQEN---SRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDED 194
HV R+K +D L E+ +R G+ + G + G ++ S +KRK + D
Sbjct: 132 HVFRKKIHEVRDIETLERVESFQMTRNGSDQYEDGHVLCG---EDLTSIKKRKHFESKHD 188
Query: 195 EDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVD------------------K 236
E D G DS + KK RVVW+ +LH+KFV AVNQ+G D +
Sbjct: 189 E--KDTG----DSISTKKARVVWSVDLHQKFVKAVNQIGFDTTSLPSFDGAMTGSVCLAE 242
Query: 237 AVPKKILDLMNVEGLTRENVASHLQKFRLYLKRLSNE 273
PKKILD+MNV LTRENVASHLQK+RLYL RL E
Sbjct: 243 VGPKKILDMMNVPWLTRENVASHLQKYRLYLSRLQKE 279
>gi|297814420|ref|XP_002875093.1| hypothetical protein ARALYDRAFT_904389 [Arabidopsis lyrata subsp.
lyrata]
gi|297320931|gb|EFH51352.1| hypothetical protein ARALYDRAFT_904389 [Arabidopsis lyrata subsp.
lyrata]
Length = 386
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 142/268 (52%), Positives = 184/268 (68%), Gaps = 18/268 (6%)
Query: 18 DKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDV 77
D+FP G+R+L VDDD +CL +LE L Y+VT+ +QA AL +LRE +++FDLV+SDV
Sbjct: 5 DQFPSGLRILLVDDDTSCLFILEKMLLRLMYQVTICSQADVALTILRERKDSFDLVLSDV 64
Query: 78 HMPDMDGFKLLEHVGL-EMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIW 136
HMP M+G+KLL+ VGL E+DLPVIM+S G T VM GI HGACDYL+KP+R EELKNIW
Sbjct: 65 HMPGMNGYKLLQQVGLLELDLPVIMMSVDGRTTTVMTGINHGACDYLIKPIRPEELKNIW 124
Query: 137 QHVIRRKKVGPKD-QNKLLNQENSRVGA-------GEGGQGAMSTGNSDQNGKSNRKRKD 188
QHV+RRK V K+ +N ++N G+ E +G++ + K + R+D
Sbjct: 125 QHVVRRKCVKKKELRNSQALEDNKNSGSLETVFSVSECSEGSLMKRRKKKKKKRSVDRED 184
Query: 189 QDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNV 248
+ D D D KK RVVW+ ELH++FV AVN+L +DKAVPK+IL+LMNV
Sbjct: 185 NENDLDL---------LDPGNSKKSRVVWSIELHQQFVNAVNKLEIDKAVPKRILELMNV 235
Query: 249 EGLTRENVASHLQKFRLYLKRLSNETPQ 276
GL+RENVASHLQKFR+YLKRLS E Q
Sbjct: 236 PGLSRENVASHLQKFRMYLKRLSGEASQ 263
>gi|307107757|gb|EFN55999.1| hypothetical protein CHLNCDRAFT_30989, partial [Chlorella
variabilis]
Length = 334
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 133/252 (52%), Positives = 175/252 (69%), Gaps = 27/252 (10%)
Query: 21 PIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLR---ENRNNFDLVISDV 77
P G++VL VDDDP CLKV+ L+ C YEV AL +LR E+ + FDLV+SDV
Sbjct: 31 PSGLKVLVVDDDPMCLKVVSAMLQRCNYEVDTRTSGQDALLLLRDRQEHNHQFDLVLSDV 90
Query: 78 HMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQ 137
+MPDMDGFKLLEH+GLE+DLPVIM+S+ GDT +V++G+THGA D+L+KPVR+EEL+N+WQ
Sbjct: 91 YMPDMDGFKLLEHIGLELDLPVIMMSSNGDTDVVLRGVTHGAVDFLIKPVRVEELRNVWQ 150
Query: 138 HVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDG 197
HV+RR+ + VG + + +G + + G + ++
Sbjct: 151 HVVRRRSL--------------HVG----------RASDEHSGLDLEQHQHHHGVKRKEV 186
Query: 198 DDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVA 257
+ ++E KKPRVVW+ E+H++FV AVNQLGVDKAVPK+ILDLMNVEGLTRENVA
Sbjct: 187 EALQVQHETQGANKKPRVVWSVEMHQQFVDAVNQLGVDKAVPKRILDLMNVEGLTRENVA 246
Query: 258 SHLQKFRLYLKR 269
SHLQK+RLYLKR
Sbjct: 247 SHLQKYRLYLKR 258
>gi|297841471|ref|XP_002888617.1| hypothetical protein ARALYDRAFT_894522 [Arabidopsis lyrata subsp.
lyrata]
gi|297334458|gb|EFH64876.1| hypothetical protein ARALYDRAFT_894522 [Arabidopsis lyrata subsp.
lyrata]
Length = 529
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 144/258 (55%), Positives = 179/258 (69%), Gaps = 21/258 (8%)
Query: 21 PIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMP 80
P+G+RVL VDDDPT LK+LE L+ C YEVT A AL++LRE ++ +D+VISDV+MP
Sbjct: 8 PVGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLLRERKDGYDIVISDVNMP 67
Query: 81 DMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
DMDGFKLLEHVGLE+DLPVIM+S G+T VMKG+ HGACDYLLKP+R++ELK IWQHV+
Sbjct: 68 DMDGFKLLEHVGLELDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELKIIWQHVL 127
Query: 141 RRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSD-------QNGKSNRKRKDQDGDE 193
R+K L + G G G G T + ++ +KRKD D ++
Sbjct: 128 RKK----------LQEVRDIEGCGYEGGGDWITRYDEAHFLGGGEDVSFGKKRKDFDFEK 177
Query: 194 DEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVD-KAVPKKILDLMNVEGLT 252
D+ + S++ KK RVVW+ ELH+KFV AVNQ+G D KA PKKILDLMNV LT
Sbjct: 178 KLLQDE---SDPSSSSSKKARVVWSFELHQKFVNAVNQIGCDHKAGPKKILDLMNVPWLT 234
Query: 253 RENVASHLQKFRLYLKRL 270
RENVASHLQK+RLYL RL
Sbjct: 235 RENVASHLQKYRLYLSRL 252
>gi|15220515|ref|NP_176938.1| two-component response regulator ARR11 [Arabidopsis thaliana]
gi|50400646|sp|Q9FXD6.1|ARR11_ARATH RecName: Full=Two-component response regulator ARR11; AltName:
Full=Receiver-like protein 3
gi|11072012|gb|AAG28891.1|AC008113_7 F12A21.15 [Arabidopsis thaliana]
gi|31711702|gb|AAP68207.1| At1g67710 [Arabidopsis thaliana]
gi|110736401|dbj|BAF00169.1| response regulator 11 [Arabidopsis thaliana]
gi|332196565|gb|AEE34686.1| two-component response regulator ARR11 [Arabidopsis thaliana]
Length = 521
Score = 270 bits (689), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 156/309 (50%), Positives = 196/309 (63%), Gaps = 34/309 (11%)
Query: 21 PIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMP 80
P+G+RVL VDDDPT LK+LE L+ C YEVT A AL++LRE ++ +D+VISDV+MP
Sbjct: 8 PVGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLLRERKDGYDIVISDVNMP 67
Query: 81 DMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
DMDGFKLLEHVGLE+DLPVIM+S G+T VMKG+ HGACDYLLKP+R++ELK IWQHV+
Sbjct: 68 DMDGFKLLEHVGLELDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELKIIWQHVL 127
Query: 141 RRKKVGPKDQNKLLNQENSRVGAG-EGGQGAMSTGNS------DQNGKSNRKRKDQDGDE 193
R+K L + G G EGG ++ + ++ +KRKD D ++
Sbjct: 128 RKK----------LQEVRDIEGCGYEGGADWITRYDEAHFLGGGEDVSFGKKRKDFDFEK 177
Query: 194 DEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVD-KAVPKKILDLMNVEGLT 252
D+ + S++ KK RVVW+ ELH KFV AVNQ+G D KA PKKILDLMNV LT
Sbjct: 178 KLLQDE---SDPSSSSSKKARVVWSFELHHKFVNAVNQIGCDHKAGPKKILDLMNVPWLT 234
Query: 253 RENVASHLQKFRLYLKRLSNETPQAGMVAALGSKDSSYLRIGALDGFGDLRSLNSPGRLS 312
RENVASHLQK+RLYL RL + + DSS + G+ SPGR
Sbjct: 235 RENVASHLQKYRLYLSRLEKGKELKCYSGGVKNADSSPKDVEVNSGY------QSPGR-- 286
Query: 313 SSAISSSYV 321
SSYV
Sbjct: 287 -----SSYV 290
>gi|7576358|dbj|BAA94549.1| response regulator 11 [Arabidopsis thaliana]
Length = 457
Score = 270 bits (689), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 156/309 (50%), Positives = 196/309 (63%), Gaps = 34/309 (11%)
Query: 21 PIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMP 80
P+G+RVL VDDDPT LK+LE L+ C YEVT A AL++LRE ++ +D+VISDV+MP
Sbjct: 8 PVGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLLRERKDGYDIVISDVNMP 67
Query: 81 DMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
DMDGFKLLEHVGLE+DLPVIM+S G+T VMKG+ HGACDYLLKP+R++ELK IWQHV+
Sbjct: 68 DMDGFKLLEHVGLELDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELKIIWQHVL 127
Query: 141 RRKKVGPKDQNKLLNQENSRVGAG-EGGQGAMSTGNS------DQNGKSNRKRKDQDGDE 193
R+K L + G G EGG ++ + ++ +KRKD D ++
Sbjct: 128 RKK----------LQEVRDIEGCGYEGGADWITRYDEAHFLGGGEDVSFGKKRKDFDFEK 177
Query: 194 DEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVD-KAVPKKILDLMNVEGLT 252
D+ + S++ KK RVVW+ ELH KFV AVNQ+G D KA PKKILDLMNV LT
Sbjct: 178 KLLQDE---SDPSSSSSKKARVVWSFELHHKFVNAVNQIGCDHKAGPKKILDLMNVPWLT 234
Query: 253 RENVASHLQKFRLYLKRLSNETPQAGMVAALGSKDSSYLRIGALDGFGDLRSLNSPGRLS 312
RENVASHLQK+RLYL RL + + DSS + G+ SPGR
Sbjct: 235 RENVASHLQKYRLYLSRLEKGKELKCYSGGVKNADSSPKDVEVNSGY------QSPGR-- 286
Query: 313 SSAISSSYV 321
SSYV
Sbjct: 287 -----SSYV 290
>gi|21593727|gb|AAM65694.1| putative two-component response regulator protein [Arabidopsis
thaliana]
Length = 382
Score = 268 bits (684), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 142/262 (54%), Positives = 187/262 (71%), Gaps = 3/262 (1%)
Query: 18 DKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDV 77
D+FP G+R+L VDDD +CL +LE L Y+VT+ +QA AL +LRE +++FDLV+SDV
Sbjct: 5 DQFPSGLRILVVDDDTSCLFILEKMLLRLMYQVTICSQADVALTILRERKDSFDLVLSDV 64
Query: 78 HMPDMDGFKLLEHVGL-EMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIW 136
HMP M+G+ LL+ VGL EMDLPVIM+S G T VM GI HGACDYL+KP+R EELKNIW
Sbjct: 65 HMPGMNGYNLLQQVGLLEMDLPVIMMSVDGRTTTVMTGINHGACDYLIKPIRPEELKNIW 124
Query: 137 QHVIRRKKVGPKD-QNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDE 195
QHV+RRK V K+ ++ ++N G+ E ++S S+++ R +K + +
Sbjct: 125 QHVVRRKCVMKKELRSSQALEDNKNSGSLETVVVSVSEC-SEESLMKCRNKKKKKKRSVD 183
Query: 196 DGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTREN 255
D++ D KK RVVW+ ELH++FV AVN+LG+DKAVPK+IL+LMNV GL+REN
Sbjct: 184 RDDNEDDLLLDPGNSKKSRVVWSIELHQQFVNAVNKLGIDKAVPKRILELMNVPGLSREN 243
Query: 256 VASHLQKFRLYLKRLSNETPQA 277
VASHLQKFRLYLKRLS E Q+
Sbjct: 244 VASHLQKFRLYLKRLSGEASQS 265
>gi|15226345|ref|NP_178285.1| two-component response regulator ARR14 [Arabidopsis thaliana]
gi|50400550|sp|Q8L9Y3.2|ARR14_ARATH RecName: Full=Two-component response regulator ARR14
gi|4220473|gb|AAD12696.1| putative two-component response regulator protein [Arabidopsis
thaliana]
gi|20466520|gb|AAM20577.1| putative two-component response regulator protein [Arabidopsis
thaliana]
gi|22136418|gb|AAM91287.1| putative two-component response regulator protein [Arabidopsis
thaliana]
gi|330250401|gb|AEC05495.1| two-component response regulator ARR14 [Arabidopsis thaliana]
Length = 382
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 142/262 (54%), Positives = 187/262 (71%), Gaps = 3/262 (1%)
Query: 18 DKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDV 77
D+FP G+R+L VDDD +CL +LE L Y+VT+ +QA AL +LRE +++FDLV+SDV
Sbjct: 5 DQFPSGLRILVVDDDTSCLFILEKMLLRLMYQVTICSQADVALTILRERKDSFDLVLSDV 64
Query: 78 HMPDMDGFKLLEHVGL-EMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIW 136
HMP M+G+ LL+ VGL EMDLPVIM+S G T VM GI HGACDYL+KP+R EELKNIW
Sbjct: 65 HMPGMNGYNLLQQVGLLEMDLPVIMMSVDGRTTTVMTGINHGACDYLIKPIRPEELKNIW 124
Query: 137 QHVIRRKKVGPKD-QNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDE 195
QHV+RRK V K+ ++ ++N G+ E ++S S+++ R +K + +
Sbjct: 125 QHVVRRKCVMKKELRSSQALEDNKNSGSLETVVVSVSEC-SEESLMKCRNKKKKKKRSVD 183
Query: 196 DGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTREN 255
D++ D KK RVVW+ ELH++FV AVN+LG+DKAVPK+IL+LMNV GL+REN
Sbjct: 184 RDDNEDDLLLDPGNSKKSRVVWSIELHQQFVNAVNKLGIDKAVPKRILELMNVPGLSREN 243
Query: 256 VASHLQKFRLYLKRLSNETPQA 277
VASHLQKFRLYLKRLS E Q+
Sbjct: 244 VASHLQKFRLYLKRLSGEASQS 265
>gi|359950754|gb|AEV91167.1| MYB-related protein [Triticum aestivum]
Length = 630
Score = 266 bits (679), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 142/268 (52%), Positives = 182/268 (67%), Gaps = 28/268 (10%)
Query: 62 MLRENRNNFDLVISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACD 121
MLRENR FD++ISDVHMPDM+GF+LLE VGLEMDLPVIM+SA T LVMKGI HGACD
Sbjct: 1 MLRENRGAFDVIISDVHMPDMNGFRLLELVGLEMDLPVIMMSADSRTDLVMKGIKHGACD 60
Query: 122 YLLKPVRIEELKNIWQHVIRRKKVGPK-----------DQNKLLNQENSRVGAGEGGQGA 170
YL+KPVR+EELKNIWQHV+R+K G K D+N+L N +N + G
Sbjct: 61 YLIKPVRMEELKNIWQHVVRKKFGGNKEHEHSGSLDDTDRNRLTNNDNEYASSANDG--- 117
Query: 171 MSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVN 230
++ + KS +K++D++ D+ E D S KK RVVW+ ELH++FV AVN
Sbjct: 118 -----AEDSWKSQKKKRDKEEDDSELESGD-----PSNNSKKLRVVWSVELHQQFVNAVN 167
Query: 231 QLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKRLSNETPQAGMVAALGSKDSSY 290
LG+DKAVPKKIL+LMNV GLTRENVASHLQKFRLYLKR++ AGM G SS
Sbjct: 168 HLGIDKAVPKKILELMNVPGLTRENVASHLQKFRLYLKRIAQH--HAGMANPYGVPASSA 225
Query: 291 LRIGALDGFGDLRSLNSPGRLSSSAISS 318
++ +L G D ++L + G++ A+++
Sbjct: 226 -QVASLGGL-DFQALAASGQIPPQALAA 251
>gi|3549639|emb|CAA06431.1| receiver-like protein 3 [Arabidopsis thaliana]
Length = 444
Score = 265 bits (678), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 155/309 (50%), Positives = 195/309 (63%), Gaps = 34/309 (11%)
Query: 21 PIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMP 80
P+G+RVL VDDDPT LK+LE L+ C YEVT A AL++LRE ++ +D+VISDV+MP
Sbjct: 8 PVGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLLRERKDGYDIVISDVNMP 67
Query: 81 DMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
DMDGFKLLEHVGLE+DLPVIM+S G+T VMKG+ GACDYLLKP+R++ELK IWQHV+
Sbjct: 68 DMDGFKLLEHVGLELDLPVIMMSVDGETSRVMKGVHTGACDYLLKPIRMKELKIIWQHVL 127
Query: 141 RRKKVGPKDQNKLLNQENSRVGAG-EGGQGAMSTGNS------DQNGKSNRKRKDQDGDE 193
R+K L + G G EGG ++ + ++ +KRKD D ++
Sbjct: 128 RKK----------LQEVRDIEGCGYEGGADWITRYDEAHFLGGGEDVSFGKKRKDFDFEK 177
Query: 194 DEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVD-KAVPKKILDLMNVEGLT 252
D+ + S++ KK RVVW+ ELH KFV AVNQ+G D KA PKKILDLMNV LT
Sbjct: 178 KLLQDE---SDPSSSSSKKARVVWSFELHHKFVNAVNQIGCDHKAGPKKILDLMNVPWLT 234
Query: 253 RENVASHLQKFRLYLKRLSNETPQAGMVAALGSKDSSYLRIGALDGFGDLRSLNSPGRLS 312
RENVASHLQK+RLYL RL + + DSS + G+ SPGR
Sbjct: 235 RENVASHLQKYRLYLSRLEKGKELKCYSGGVKNADSSPKDVEVNSGY------QSPGR-- 286
Query: 313 SSAISSSYV 321
SSYV
Sbjct: 287 -----SSYV 290
>gi|384254096|gb|EIE27570.1| CheY-like protein [Coccomyxa subellipsoidea C-169]
Length = 302
Score = 265 bits (678), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 132/245 (53%), Positives = 173/245 (70%), Gaps = 21/245 (8%)
Query: 20 FPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM 79
FP G++VL VDDDP CLKV+E+ LR C Y+VT AL+ LR+ +FDLV+SDV+M
Sbjct: 50 FPAGLKVLVVDDDPLCLKVVEHMLRRCNYQVTTCPNGKAALEKLRDRSVHFDLVLSDVYM 109
Query: 80 PDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
PDMDGFKLLEH+GLE+DLPVIM+S+ G+T +V++G+THGA D+L+KPVR+EEL+N+WQHV
Sbjct: 110 PDMDGFKLLEHIGLELDLPVIMMSSNGETNVVLRGVTHGAVDFLIKPVRVEELRNVWQHV 169
Query: 140 IRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDE---DED 196
+RRK +DQ Q S SD+ G + K +D+ E
Sbjct: 170 VRRK----RDQ--------------AVSQARDSRDISDEEGTDDGKPRDKKRKEVILVLW 211
Query: 197 GDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENV 256
D +++D + KK RVVW+ E+H++FV AVNQLG+DKAVPK+ILDLMNV+GLTRENV
Sbjct: 212 WDMQRRDSDDGVSAKKARVVWSVEMHQQFVQAVNQLGIDKAVPKRILDLMNVDGLTRENV 271
Query: 257 ASHLQ 261
ASHLQ
Sbjct: 272 ASHLQ 276
>gi|225437477|ref|XP_002269371.1| PREDICTED: two-component response regulator ARR2-like [Vitis
vinifera]
Length = 519
Score = 265 bits (677), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 131/253 (51%), Positives = 172/253 (67%), Gaps = 21/253 (8%)
Query: 19 KFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVH 78
+FP G+RVLAVDDD TCL+++ L C Y+VT A AL +LRE+ + FD+V+SD+H
Sbjct: 19 QFPEGIRVLAVDDDQTCLQIMGRMLERCMYKVTKCRNAEEALSLLREDSSRFDIVLSDLH 78
Query: 79 MPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQH 138
MPD+ G KLLE +GLEMD+PV+M+S+ + +MKGI HGACDY +KPVR++ ++ +WQH
Sbjct: 79 MPDISGLKLLEIIGLEMDMPVVMMSSDEKRETIMKGIIHGACDYWVKPVRMDAIQLVWQH 138
Query: 139 VIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGD 198
VIR+++ G K+ + + EGG ++ G + KRK DE E
Sbjct: 139 VIRKRRNGLKEMEHAMEDDV------EGG---------NEEGSRSMKRKKDREDEGES-- 181
Query: 199 DDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVAS 258
N TT KKPR+VWTP LH++FV AVNQLG KAVPKKIL+ MN+ GLTRENVAS
Sbjct: 182 ----RNAMPTTVKKPRMVWTPALHQQFVAAVNQLGYSKAVPKKILEQMNLPGLTRENVAS 237
Query: 259 HLQKFRLYLKRLS 271
HLQKFRLYL R+S
Sbjct: 238 HLQKFRLYLSRVS 250
>gi|159485404|ref|XP_001700734.1| hypothetical protein CHLREDRAFT_113139 [Chlamydomonas reinhardtii]
gi|158281233|gb|EDP06988.1| predicted protein, partial [Chlamydomonas reinhardtii]
Length = 235
Score = 265 bits (677), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 139/244 (56%), Positives = 173/244 (70%), Gaps = 10/244 (4%)
Query: 20 FPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM 79
FP G+R+L VDDDP CLKV+E LR C YEVTV + A TAL +LR+ +DLV+SDV+M
Sbjct: 1 FPAGLRLLVVDDDPLCLKVVEQMLRKCSYEVTVCSNATTALNILRDKNTEYDLVLSDVYM 60
Query: 80 PDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
PDMDGF+LLE VGLEMDLPVIM+S+ GDT V++G+THGACDYL+KPVR+EEL+N+WQHV
Sbjct: 61 PDMDGFRLLELVGLEMDLPVIMMSSNGDTSNVLRGVTHGACDYLIKPVRLEELRNLWQHV 120
Query: 140 IRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDD 199
+RR++ D Q RVG GG + N Q K N Q + E G
Sbjct: 121 VRRRRQRKADAA---GQRERRVGP-LGGGACVRRVNRAQPSKLN-----QGHVQRERGRG 171
Query: 200 D-GHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVAS 258
G + + KK RVVW+ E+H++FV AVNQLG+DKAVPKKIL++M V+GLTRENVAS
Sbjct: 172 RVGKAPLLNGSNKKARVVWSVEMHQQFVNAVNQLGIDKAVPKKILEIMGVDGLTRENVAS 231
Query: 259 HLQK 262
HLQK
Sbjct: 232 HLQK 235
>gi|356528234|ref|XP_003532710.1| PREDICTED: LOW QUALITY PROTEIN: two-component response regulator
ARR11-like [Glycine max]
Length = 581
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 140/281 (49%), Positives = 173/281 (61%), Gaps = 10/281 (3%)
Query: 18 DKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDV 77
D FP G+RVL VDD + + +FL VT A ALK LRE + +D+VISDV
Sbjct: 13 DAFPAGLRVLVVDDXANIISLSNSFLLYAS--VTTCCLATEALKKLRERKEAYDIVISDV 70
Query: 78 HMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQ 137
+MPDMDGFKLLE VGLEMDLPVIM+S G+T VMKG+ HGACDYLLKP+R++EL+NIWQ
Sbjct: 71 NMPDMDGFKLLEQVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQ 130
Query: 138 HVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGN--SDQNGKSNRKRKDQDGDEDE 195
HV R++ +D + + G GN + + S +KRKD D D+
Sbjct: 131 HVFRKRMHEARDFESHEGFDFEGIHLMRNGSDHSDDGNLFAVEETTSIKKRKDADNKHDD 190
Query: 196 DGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTREN 255
E D KK RVVW+ +LH+KFV AVNQ+G DK PKKILDLMNV LTREN
Sbjct: 191 ------KEFGDHFPTKKARVVWSVDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTREN 244
Query: 256 VASHLQKFRLYLKRLSNETPQAGMVAALGSKDSSYLRIGAL 296
VASHLQK+RLYL RL E Q + + DS +G+
Sbjct: 245 VASHLQKYRLYLSRLQKENDQKSSSSGIKHSDSPSKDLGSF 285
>gi|356554487|ref|XP_003545577.1| PREDICTED: LOW QUALITY PROTEIN: two-component response regulator
ARR12-like [Glycine max]
Length = 379
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 139/247 (56%), Positives = 175/247 (70%), Gaps = 6/247 (2%)
Query: 18 DKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDV 77
D+FP+G+ V+A+DDD CL VLEN + C Y VT TNQA+ L MLR+N N FDL+ISDV
Sbjct: 74 DRFPVGLCVVAIDDDQMCLTVLENLIHKCHYNVTTTNQAIKVLXMLRKNINKFDLLISDV 133
Query: 78 HMPDMDGFKLLEHVGLEMDLPVI--MLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNI 135
++PDMDGFKLLE VGL+MDLP I + Y + + GAC+YL KP+RIEEL+NI
Sbjct: 134 NIPDMDGFKLLELVGLQMDLPFITKIKHLYSVFTFIQLDVIQGACEYLTKPIRIEELQNI 193
Query: 136 WQHVIRRKKVGPKDQNKLL-NQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDED 194
W+HV+R ++ KD+NK N+E + AGE Q N+DQN K +KRK+Q DE+
Sbjct: 194 WKHVLRM-RIDSKDKNKTFANEEKASYMAGECSQAMAPKNNTDQNIKLGQKRKEQSEDEE 252
Query: 195 EDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRE 254
E+ ENE+ Q KPR+VW ELHRKF+ AV+ LG+DKA PK+ILDLMNVEGLTRE
Sbjct: 253 EEE--YHKENEEHLNQNKPRLVWDVELHRKFLVAVDDLGIDKAFPKRILDLMNVEGLTRE 310
Query: 255 NVASHLQ 261
NVASHLQ
Sbjct: 311 NVASHLQ 317
>gi|302852985|ref|XP_002958010.1| ARR-B family transcription factor [Volvox carteri f. nagariensis]
gi|300256682|gb|EFJ40943.1| ARR-B family transcription factor [Volvox carteri f. nagariensis]
Length = 254
Score = 255 bits (651), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 134/253 (52%), Positives = 167/253 (66%), Gaps = 23/253 (9%)
Query: 15 GDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVI 74
G FP G+R+L VDDDP CLKV+E LR C Y+VT A AL +LR+ +DLV+
Sbjct: 19 GHWHNFPAGLRLLVVDDDPLCLKVVEQMLRKCSYDVTTCTNATMALNLLRDKSTEYDLVL 78
Query: 75 SD---VHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEE 131
SD V DMDGFKLLE VGLEMDLPVIM+S+ GDT V++G+THGACDYL+KPVR+EE
Sbjct: 79 SDSFLVSSSDMDGFKLLEVVGLEMDLPVIMMSSNGDTSNVLRGVTHGACDYLIKPVRLEE 138
Query: 132 LKNIWQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGN---SDQNGKSNRKRKD 188
L+N+WQHV+RR++ Q +++ G G G STGN
Sbjct: 139 LRNLWQHVVRRRR-----QLRMMG-----AGCSGGANGLGSTGNLGAVATGSAGLGLGLG 188
Query: 189 QDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNV 248
DE G D+G + KK RVVW+ E+H++FV AVNQLG+DKAVPKKIL++MNV
Sbjct: 189 TAADELGLGLDNG-------SSKKARVVWSVEMHQQFVNAVNQLGIDKAVPKKILEIMNV 241
Query: 249 EGLTRENVASHLQ 261
+GLTRENVASHLQ
Sbjct: 242 DGLTRENVASHLQ 254
>gi|224102357|ref|XP_002312648.1| type-b response regulator [Populus trichocarpa]
gi|222852468|gb|EEE90015.1| type-b response regulator [Populus trichocarpa]
Length = 642
Score = 251 bits (641), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 155/358 (43%), Positives = 192/358 (53%), Gaps = 80/358 (22%)
Query: 18 DKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDV 77
D FP G+RVL VDDDPT LK+LE L+ C YEVT A AL +LRE + +D+VISDV
Sbjct: 12 DSFPAGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLARDALNLLRERKGGYDIVISDV 71
Query: 78 HMPDMDGFKLLEHVGLEMDLPVI------------------------------------- 100
+MPDMDGFKLLE VGLEMDLPVI
Sbjct: 72 YMPDMDGFKLLEQVGLEMDLPVISRFFSLTLEFYFNANIFYLRIHIPMSCLHYIYIGILI 131
Query: 101 -----------MLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKVGPKD 149
++S G+T VMKG+ HGACDYLLKP+R++EL+NIWQHV R+K +D
Sbjct: 132 QLLTSCACQLTVMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRD 191
Query: 150 QNKLLNQEN---SRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHENED 206
L E+ +R G+ + G + G ++ S +KRK + DE D G D
Sbjct: 192 IETLERVESFQMTRNGSDQYEDGHVLCG---EDLTSIKKRKHIESKHDE--KDTG----D 242
Query: 207 STTQKKPRVVWTPELHRKFVGAVNQLGVD------------------KAVPKKILDLMNV 248
S + KK RVVW+ +LH+KFV AVNQ+G D + PKKILD+MNV
Sbjct: 243 SISTKKARVVWSVDLHQKFVKAVNQIGFDTTSLPSFDGAMTGSVCLAEVGPKKILDMMNV 302
Query: 249 EGLTRENVASHLQKFRLYLKRLSNETPQAGMVAALGSKDSSYLRIGALDGFGDLRSLN 306
LTRENVASHLQK+RLYL RL E + DS LR A FG S+N
Sbjct: 303 PWLTRENVASHLQKYRLYLSRLQKENDFKNPAGGIKQSDSP-LRDSA-GSFGSQNSIN 358
>gi|297743941|emb|CBI36911.3| unnamed protein product [Vitis vinifera]
Length = 543
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 131/280 (46%), Positives = 172/280 (61%), Gaps = 48/280 (17%)
Query: 19 KFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVH 78
+FP G+RVLAVDDD TCL+++ L C Y+VT A AL +LRE+ + FD+V+SD+H
Sbjct: 19 QFPEGIRVLAVDDDQTCLQIMGRMLERCMYKVTKCRNAEEALSLLREDSSRFDIVLSDLH 78
Query: 79 MPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQH 138
MPD+ G KLLE +GLEMD+PV+M+S+ + +MKGI HGACDY +KPVR++ ++ +WQH
Sbjct: 79 MPDISGLKLLEIIGLEMDMPVVMMSSDEKRETIMKGIIHGACDYWVKPVRMDAIQLVWQH 138
Query: 139 VIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGD 198
VIR+++ G K+ + + EGG ++ G + KRK DE E
Sbjct: 139 VIRKRRNGLKEMEHAMEDDV------EGG---------NEEGSRSMKRKKDREDEGES-- 181
Query: 199 DDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVAS 258
N TT KKPR+VWTP LH++FV AVNQLG KAVPKKIL+ MN+ GLTRENVAS
Sbjct: 182 ----RNAMPTTVKKPRMVWTPALHQQFVAAVNQLGYSKAVPKKILEQMNLPGLTRENVAS 237
Query: 259 HL---------------------------QKFRLYLKRLS 271
HL QKFRLYL R+S
Sbjct: 238 HLQVMEKIFSRKIYCYCLVKDTDNYSYMVQKFRLYLSRVS 277
>gi|255564288|ref|XP_002523141.1| two-component sensor histidine kinase bacteria, putative [Ricinus
communis]
gi|223537703|gb|EEF39326.1| two-component sensor histidine kinase bacteria, putative [Ricinus
communis]
Length = 473
Score = 248 bits (632), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 130/274 (47%), Positives = 175/274 (63%), Gaps = 16/274 (5%)
Query: 18 DKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDV 77
++FP G+RVL VDDD TCL +LE LR C Y+VT +A AL MLRE++N FD+V+ D+
Sbjct: 29 NEFPAGLRVLVVDDDRTCLLILEKMLRNCLYKVTKCRKAKDALSMLREDKNKFDIVVIDL 88
Query: 78 HMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQ 137
HMPDMDGF+LLE EM LPV+M+S+ D +++ KG+ HGACDYL+KPVR+E LK IWQ
Sbjct: 89 HMPDMDGFELLEIAEFEMGLPVVMMSSDDDHEVIKKGVLHGACDYLIKPVRMEALKMIWQ 148
Query: 138 HVIRRKKVGPKDQ-NKLLNQENS-RVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDE 195
HVIR+KK KD+ +L+ E+ + M GN + S R+R ++ DE
Sbjct: 149 HVIRKKKNTAKDELEQLIGLEDDILLLTKPDSDDDMIHGNLNNTRNSKRRRNNEYDDEPS 208
Query: 196 DGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDL---MNVEGLT 252
D G K R++WT ELH KFV A N LG + AVP KIL+ MNV +T
Sbjct: 209 DPAATG----------KKRMIWTEELHEKFVRAFNHLGHENAVPLKILECLQRMNVHSIT 258
Query: 253 RENVASHLQKFRLYLKRLSNETPQAGMVAALGSK 286
RE++ASHLQK+R+YL++ ++ PQ L S+
Sbjct: 259 REHIASHLQKYRMYLRK-QDDIPQLKQEHLLPSR 291
>gi|225446094|ref|XP_002270118.1| PREDICTED: uncharacterized protein LOC100266808 [Vitis vinifera]
Length = 643
Score = 243 bits (620), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 127/255 (49%), Positives = 164/255 (64%), Gaps = 21/255 (8%)
Query: 16 DIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVIS 75
D +FP G+RVLAVDD+ CLK+L L C+Y+VT T +A AL+MLRENR NFD+VI+
Sbjct: 140 DGTQFPDGLRVLAVDDNIVCLKILVTLLEQCRYKVTATTKACEALEMLRENRENFDIVIT 199
Query: 76 DVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNI 135
DV MPDMDGF LL+ +GLEMD+PVIM S D V+KGI HGA DYLLKPVR+ E+KNI
Sbjct: 200 DVKMPDMDGFTLLKIIGLEMDIPVIMTSVNDDRSTVLKGIRHGARDYLLKPVRVLEIKNI 259
Query: 136 WQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDE 195
WQHV+R+ ++ + G E M G+ + +D +
Sbjct: 260 WQHVVRKNLF-----------DSGKPGVKEEKAMEMEKSKEKGGGEEEEEEEDHPKE--- 305
Query: 196 DGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQL-GVDKAVPKKILDLMNVEGLTRE 254
H ED + +KK R+ WT ELH KF+ A++QL DKAVPKKIL++MN GL+RE
Sbjct: 306 ------HSFEDGSVRKKQRLNWTSELHIKFLNAIHQLETADKAVPKKILEIMNEPGLSRE 359
Query: 255 NVASHLQKFRLYLKR 269
NVASHLQK+R L++
Sbjct: 360 NVASHLQKYRKMLRK 374
>gi|242093586|ref|XP_002437283.1| hypothetical protein SORBIDRAFT_10g024180 [Sorghum bicolor]
gi|241915506|gb|EER88650.1| hypothetical protein SORBIDRAFT_10g024180 [Sorghum bicolor]
Length = 685
Score = 241 bits (616), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 140/327 (42%), Positives = 189/327 (57%), Gaps = 54/327 (16%)
Query: 18 DKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENR---NNFDLVI 74
D FP G+RVLAV+ D C KVLE L+ C Y T+ A TAL MLRE + N FDLVI
Sbjct: 4 DTFPAGLRVLAVEHDRVCRKVLERQLQYCNYNATMVTNAQTALDMLRERKEYGNQFDLVI 63
Query: 75 SDVHMP--DMDGFKLLEHVGLEMDLPVI------------------MLSAYGDTKLVMKG 114
S+V MP +MDGFKLLE +GLEMDLPVI +LSA +T+ +MKG
Sbjct: 64 SNVVMPKPNMDGFKLLELIGLEMDLPVICNKALAQTYFLHFYGTLYVLSANSETQTIMKG 123
Query: 115 ITHGACDYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTG 174
I HGAC+Y++KPVR+E+L+ IW HV++ K + + G
Sbjct: 124 IKHGACEYMVKPVRLEQLRGIWTHVVKNSKT-------------------DHAIRKLPCG 164
Query: 175 NSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGV 234
+ D+ +RK K D+ + ++++TQKK RV W ELH+KFV A+NQ+G+
Sbjct: 165 DGDKVKNYSRKNKMVVDVADD-------DKDNTSTQKKQRVQWCGELHQKFVQAINQIGM 217
Query: 235 DKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKRLS-----NETPQAGMVAALGSKDSS 289
D+AVPKKIL++MNVEGLT+ENVASHLQK+R+YL++LS N P A AL +
Sbjct: 218 DRAVPKKILEVMNVEGLTKENVASHLQKYRIYLRKLSEGTLRNYNPFADETEALWRNKNV 277
Query: 290 YLRIGALDGFGDLRSLNSPGRLSSSAI 316
IG+ +NS + + A+
Sbjct: 278 PFFIGSPSSSNHFAKMNSLSAIGTQAL 304
>gi|147835104|emb|CAN70187.1| hypothetical protein VITISV_039080 [Vitis vinifera]
Length = 650
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 128/255 (50%), Positives = 166/255 (65%), Gaps = 22/255 (8%)
Query: 16 DIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVIS 75
D +FP G+RVLAVDD+ CLK+L L C+Y+VT T +A AL+MLRENR NFD+VI+
Sbjct: 148 DGTQFPDGLRVLAVDDNIVCLKILVTLLEQCRYKVTATTKACEALEMLRENRXNFDIVIT 207
Query: 76 DVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNI 135
DV MPDMDGF LL+ +GLEMD+PVIM S D V+KGI HGA DYLLKPVR+ E+KNI
Sbjct: 208 DVKMPDMDGFTLLKIIGLEMDIPVIMTSVNDDRSTVLKGIRHGARDYLLKPVRVLEIKNI 267
Query: 136 WQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDE 195
WQHV+R+ ++ + G E + AM S + + ++ E
Sbjct: 268 WQHVVRKNLF-----------DSGKPGVKE--EKAMEMEKSKEKEGGGEEEEEDHPKE-- 312
Query: 196 DGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQL-GVDKAVPKKILDLMNVEGLTRE 254
H ED + +KK R+ WT ELH KF+ A++QL DKAVPKKIL++MN GL+RE
Sbjct: 313 ------HSFEDGSVRKKQRLNWTSELHIKFLNAIHQLETADKAVPKKILEIMNEPGLSRE 366
Query: 255 NVASHLQKFRLYLKR 269
NVASHLQK+R L++
Sbjct: 367 NVASHLQKYRKMLRK 381
>gi|297733625|emb|CBI14872.3| unnamed protein product [Vitis vinifera]
Length = 468
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 120/232 (51%), Positives = 160/232 (68%), Gaps = 13/232 (5%)
Query: 42 FLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDGFKLLEHVGLEMDLPVIM 101
L+ C YE+T A AL ML+E +N+FD++ISDV+MPDMDGF+LLEH+ +EMDLPVI+
Sbjct: 1 MLKKCSYEMTTCCVARDALSMLQERKNSFDIIISDVNMPDMDGFQLLEHLEVEMDLPVIL 60
Query: 102 LSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRV 161
+S G+ VMKG+ GACDYLLKPVR+EELKNIWQHV+R+K K+ ++++ ++ +
Sbjct: 61 ISVDGEMNRVMKGVQSGACDYLLKPVRMEELKNIWQHVLRKKIHEGKNSQVMISRSSNEL 120
Query: 162 GAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPEL 221
G+ G + + RKRKD E+ D ++ + +T KK RVVW+ +L
Sbjct: 121 DDGQQLNGGEVS--------ATRKRKDM-----ENRRHDDQKSVEPSTSKKARVVWSIDL 167
Query: 222 HRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKRLSNE 273
H+KFV V Q+G DKA PKKILDLMNV LTRENVASHLQK+R YL +L E
Sbjct: 168 HQKFVDVVTQIGYDKARPKKILDLMNVPWLTRENVASHLQKYRFYLSKLRKE 219
>gi|147805870|emb|CAN64871.1| hypothetical protein VITISV_039966 [Vitis vinifera]
Length = 570
Score = 238 bits (608), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 135/285 (47%), Positives = 176/285 (61%), Gaps = 43/285 (15%)
Query: 18 DKFPIGMRVLAVDDDPTCLKVLENFLRA--------CQ-----YEVTVTNQAVT--ALKM 62
D FP G+RVLAVDDDP LK+L R C+ Y VT V AL M
Sbjct: 8 DAFPAGLRVLAVDDDPAWLKILLIIFRKKLNFAGVICRMFPKLYLARVTTCCVARDALSM 67
Query: 63 LRENRNNFDLVISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDY 122
L+E +N+FD++ISDV+MPDMDGF+LLEH+ +EMDLPVI++S G+ VMKGI GACDY
Sbjct: 68 LQERKNSFDIIISDVNMPDMDGFQLLEHLEVEMDLPVILISVDGEMNRVMKGIQSGACDY 127
Query: 123 LLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKS 182
LLKPVR+EELKNIWQHV+R+K K+ ++++ ++ + G+ G + +
Sbjct: 128 LLKPVRMEELKNIWQHVLRKKIHEGKNSQVMISRSSNELDDGQQLNGGEVS--------A 179
Query: 183 NRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDK------ 236
RKRKD E+ D ++ + +T KK RVVW+ +LH+KFV V Q+G D+
Sbjct: 180 TRKRKDM-----ENRRHDDQKSVEPSTSKKARVVWSIDLHQKFVDVVTQIGYDRFCIDGV 234
Query: 237 --------AVPKKILDLMNVEGLTRENVASHLQKFRLYLKRLSNE 273
A PKKILDLMNV LTRENVASHLQ +R YL +L E
Sbjct: 235 LMVIHLTEARPKKILDLMNVPWLTRENVASHLQ-YRFYLSKLRKE 278
>gi|2244969|emb|CAB10390.1| hypothetical protein [Arabidopsis thaliana]
gi|3549643|emb|CAA06433.1| receiver-like protein 5 [Arabidopsis thaliana]
gi|7268360|emb|CAB78653.1| hypothetical protein [Arabidopsis thaliana]
Length = 644
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 145/330 (43%), Positives = 195/330 (59%), Gaps = 58/330 (17%)
Query: 18 DKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDV 77
D FP +RVL VDDDPTCL +LE L C Y Q L R +N FD+VISDV
Sbjct: 22 DPFPANLRVLVVDDDPTCLMILERMLMTCLYR----EQRAHCLCFGR-TKNGFDIVISDV 76
Query: 78 HMPDMDGFKLLEHVGLEMDLP----------VIMLSAYGDTKLVMKGITHGACDYLLKPV 127
HMPDMDGFKLLEHVGLEMDLP VI++SA +V+KG+THGA DYL+KPV
Sbjct: 77 HMPDMDGFKLLEHVGLEMDLPVINLNVLKPLVIVMSADDSKSVVLKGVTHGAVDYLIKPV 136
Query: 128 RIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQ--------- 178
RIE LKNIWQHV+R+K+ N+ N V GG + G+ D+
Sbjct: 137 RIEALKNIWQHVVRKKR----------NEWN--VSEHSGGSIEDTGGDRDRQQQHREDAD 184
Query: 179 ---------NGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAV 229
NG+S+RKRK +E+ DD G + EDS++ KKPRVVW+ ELH++FV AV
Sbjct: 185 NNSSSVNEGNGRSSRKRK------EEEVDDQGDDKEDSSSLKKPRVVWSVELHQQFVAAV 238
Query: 230 NQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKRLSNETPQAGMV--AALGSKD 287
NQLGVD + K LM++ ++ N+ QK+R+YL+RL + G + + + +D
Sbjct: 239 NQLGVDSEL--KTCLLMHL-CVSIGNIVE-FQKYRIYLRRLGGVSQHQGNMNHSFMTGQD 294
Query: 288 SSYLRIGALDGFGDLRSLNSPGRLSSSAIS 317
S+ + +L+GF DL+SL G+L +++
Sbjct: 295 QSFGPLSSLNGF-DLQSLAVTGQLPPQSLA 323
>gi|358345518|ref|XP_003636824.1| Response regulator [Medicago truncatula]
gi|358348887|ref|XP_003638473.1| Response regulator [Medicago truncatula]
gi|355502759|gb|AES83962.1| Response regulator [Medicago truncatula]
gi|355504408|gb|AES85611.1| Response regulator [Medicago truncatula]
Length = 240
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 140/270 (51%), Positives = 170/270 (62%), Gaps = 63/270 (23%)
Query: 18 DKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDV 77
D+FPIGMRVLAVD D T L LE LR+CQY VT T+QA TAL MLREN++ FDLVI+DV
Sbjct: 6 DRFPIGMRVLAVDGDSTHLSDLETRLRSCQYHVTTTSQAKTALTMLRENKDKFDLVIADV 65
Query: 78 HMPDMDGFKLLEHVGLEMDLPVI-MLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIW 136
H+PDMDG KLLE V LE DLPV+ MLS D +LVMK + HGA D+L+KPVR++ELK IW
Sbjct: 66 HLPDMDGLKLLELVELETDLPVVVMLSESSDNELVMKAVFHGASDFLVKPVRLQELKTIW 125
Query: 137 QHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDED 196
QHVIR K+KD
Sbjct: 126 QHVIR-------------------------------------------KKKD-------- 134
Query: 197 GDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENV 256
NED + QKK + VW+ ELH KFV AVNQLG+DKAVP+KIL LMNVE +TRE+V
Sbjct: 135 -------NEDLSAQKKSQSVWSVELHHKFVAAVNQLGIDKAVPEKILGLMNVENITREDV 187
Query: 257 ASHLQKFRL--YLKRLSNETPQ--AGMVAA 282
ASHL+K+RL Y+K++S+ Q + +VAA
Sbjct: 188 ASHLRKYRLIDYVKKVSSVANQHASSLVAA 217
>gi|255547922|ref|XP_002515018.1| two-component sensor histidine kinase bacteria, putative [Ricinus
communis]
gi|223546069|gb|EEF47572.1| two-component sensor histidine kinase bacteria, putative [Ricinus
communis]
Length = 419
Score = 228 bits (581), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 136/309 (44%), Positives = 184/309 (59%), Gaps = 35/309 (11%)
Query: 20 FPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM 79
FP G+RVL VD+DPT ++LE L+ C Y+V T + AL MLR ++ +D+VI DV
Sbjct: 14 FPAGLRVLVVDNDPTWSRILEKMLKKCSYQVA-TCGSRDALNMLRGRKDEYDIVICDVTT 72
Query: 80 PDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
DMDGF+LLEH+GL+MD PVI SA + KG+ HGACDYLLKP+R++EL+NIWQHV
Sbjct: 73 SDMDGFRLLEHIGLKMDCPVINASALXXASALQKGVRHGACDYLLKPIRMKELRNIWQHV 132
Query: 140 IRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDD 199
RK++ + ++L G+ + G + G ++ S +KRK D
Sbjct: 133 F-RKRIHEVRECEIL-------GSDQACDGPLLRG---EDLASVKKRKYAD--------- 172
Query: 200 DGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASH 259
+ D ++ K R+VWT +LH+KFV AV+Q+G DK PKKILD MNV LTRENVA H
Sbjct: 173 ---QKADISSAKMARLVWTVDLHQKFVKAVHQIGFDKIGPKKILDRMNVPWLTRENVAGH 229
Query: 260 LQKFRLYLKRLSNET--PQAGMVAALGSKDSSYLRIGAL------DGFGDLRSLNSPGRL 311
LQK+RLYL RL E AG+ +++ K LRI + F + SP R
Sbjct: 230 LQKYRLYLSRLQTEKDLKFAGLYSSVLKKQIG-LRIACVYLNKIASNFINFSV--SPSRD 286
Query: 312 SSSAISSSY 320
S +IS+ Y
Sbjct: 287 SPRSISTGY 295
>gi|224143763|ref|XP_002325066.1| type-b response regulator [Populus trichocarpa]
gi|222866500|gb|EEF03631.1| type-b response regulator [Populus trichocarpa]
Length = 517
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 137/317 (43%), Positives = 186/317 (58%), Gaps = 35/317 (11%)
Query: 13 EDGDIDKF-PIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFD 71
++G D F P +RVLA+D + CLK L L+ CQY VT T A ALKMLREN+N++
Sbjct: 15 DEGRGDMFNPADLRVLAIDANVVCLKYLVAILQKCQYRVTSTTLAAEALKMLRENKNDYH 74
Query: 72 LVISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEE 131
+VI+DV DMDGFKLLE +GLEMDLPVI++SA +MKGI HGA DYLLKPVRI+E
Sbjct: 75 VVITDVKRLDMDGFKLLEIIGLEMDLPVILVSAEDSQSSIMKGIRHGARDYLLKPVRIQE 134
Query: 132 LKNIWQHVIRRKKVGPKDQNKLLNQ---ENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKD 188
++NIWQHV+R++ D++ + E V + E A TG ++
Sbjct: 135 MQNIWQHVVRKRLSDSSDKSSSFTKEIIEQESVPSTEPMAEAEVTGVKEK---------- 184
Query: 189 QDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGV--DKAVPKKILDLM 246
+ G+ N D+ + KKPRV W+ ELH KFV V +L ++ PK+I ++M
Sbjct: 185 ---------EIIGNPNGDACSGKKPRVTWSSELHVKFVDCVEKLEARGERVQPKRIREMM 235
Query: 247 NVEGLTRENVASHLQKFRLYLKRLSNETPQAGMVAALGSKDSSYLRI-----GALDGFGD 301
NVEGL+REN+ASHLQK+R LK+ ++ Q G+ + Y RI G + +GD
Sbjct: 236 NVEGLSRENIASHLQKYRNLLKKHKDKMNQQDNA---GTDLNRYGRISATKNGLWNTYGD 292
Query: 302 LRSLNSPGRLSSSAISS 318
S P L+SS S
Sbjct: 293 --STPKPQSLASSCTDS 307
>gi|90658417|gb|ABD97105.1| SRR392 [Striga asiatica]
Length = 453
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 131/252 (51%), Positives = 166/252 (65%), Gaps = 33/252 (13%)
Query: 79 MPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQH 138
MPDMDGFKLLEHVGLEMDLPVIM+SA +VMKG+THGACDYL+KPVR+E LKNIWQH
Sbjct: 1 MPDMDGFKLLEHVGLEMDLPVIMMSADDSKNVVMKGVTHGACDYLIKPVRMEALKNIWQH 60
Query: 139 VIRRKKVGPKDQNKLLNQENSRVGAGEGGQ--------GAMSTGNSDQNGKSNRKRKDQD 190
V+R K + + +E + G+ E G+ S+ N N KS+++RK+ +
Sbjct: 61 VVR------KKKYEWKEKEQEQSGSVEDGERQPKQEDVDYSSSANEGNNWKSSKRRKEDE 114
Query: 191 GDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEG 250
ED+ ED++T KKPRVVW+ ELH++FV AVNQLG+DKAVPKKIL+LM+V G
Sbjct: 115 EGEDK---------EDTSTLKKPRVVWSVELHQQFVTAVNQLGIDKAVPKKILELMSVPG 165
Query: 251 LTRENVASHLQKFRLYLKRLSNETPQAGMVAALGSKDSSYLRIGALDGFGDLRSLNSPGR 310
L+RENVASHLQK+RLYLKRLS + + +G D S FG L LN G
Sbjct: 166 LSRENVASHLQKYRLYLKRLSGQHQNGLGNSYMGPTDPS---------FGPLNPLNVNG- 215
Query: 311 LSSSAISSSYVP 322
L ++SS +P
Sbjct: 216 LDFHTLASSPLP 227
>gi|147775384|emb|CAN78184.1| hypothetical protein VITISV_031283 [Vitis vinifera]
Length = 609
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 102/271 (37%), Positives = 162/271 (59%), Gaps = 12/271 (4%)
Query: 16 DIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVIS 75
+I +G+ ++ VDDD CL ++ L+ +YEV N A AL LR N F L+++
Sbjct: 13 EIKTSHVGLHIMVVDDDVICLSIVAGILKTWKYEVVTVNSAQDALTTLRTRSNFFHLIVT 72
Query: 76 DVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNI 135
DVHMP+MDGF+ V E LPV+M+SA +++G+ GA Y++KPV ++LKN+
Sbjct: 73 DVHMPEMDGFEFQRLVHEEFHLPVVMMSADDKESSMLRGLEAGAAFYIVKPVNYDDLKNL 132
Query: 136 WQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSD----QNGKSNRKRKDQDG 191
WQ+ + K K ++ ++ QE R +G T N++ N + + KR +
Sbjct: 133 WQYAVGXK----KGKSHIVMQEIERT---QGASXLEKTSNNEVESLMNEEKHNKRDSKRK 185
Query: 192 DEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGL 251
+ + +G E ++ KK +V+WT LH +F+ A ++G+++AVPK+IL++MNV GL
Sbjct: 186 TLKKTNEGNGKEKSETVAPKKAKVIWTSALHNRFLEAARKIGLERAVPKRILEIMNVPGL 245
Query: 252 TRENVASHLQKFRLYLKRLSNETPQAGMVAA 282
TRENVASHLQK+R++LKR+ ET +G +
Sbjct: 246 TRENVASHLQKYRIFLKRVM-ETSSSGTITG 275
>gi|308812550|ref|XP_003083582.1| OJ1695_H09.29 gene product (ISS) [Ostreococcus tauri]
gi|116055463|emb|CAL58131.1| OJ1695_H09.29 gene product (ISS) [Ostreococcus tauri]
Length = 297
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 107/203 (52%), Positives = 134/203 (66%), Gaps = 16/203 (7%)
Query: 79 MPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQH 138
MPD+DGFKLLE + E++LPV+M+SA D+ +V++GI HGA DYLLKPVRIEEL+NIWQH
Sbjct: 1 MPDVDGFKLLEIIQFELNLPVLMMSANSDSSVVLRGIIHGAVDYLLKPVRIEELRNIWQH 60
Query: 139 VIRRKK----------VGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKD 188
V+RR V P +K L S + E + A G+S K K+
Sbjct: 61 VVRRDYSARNSGSEDGVNPSSPSKRLKTSGSDSKSEEVERAANEAGSSKARKKPAGKKGA 120
Query: 189 QDGDEDEDGDDDGHENEDST-TQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMN 247
+ E E D+ + KKPRVVW+ ELH +FV AVNQLG+DKAVPK+ILDLM
Sbjct: 121 KGSKEKE-----AERKGDAIDSSKKPRVVWSAELHTQFVTAVNQLGIDKAVPKRILDLMG 175
Query: 248 VEGLTRENVASHLQKFRLYLKRL 270
++GLTRENVASHLQK+RLYLKRL
Sbjct: 176 IQGLTRENVASHLQKYRLYLKRL 198
>gi|358345516|ref|XP_003636823.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|358348885|ref|XP_003638472.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|355502758|gb|AES83961.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|355504407|gb|AES85610.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|403502189|gb|AFR46617.1| response regulator 1 [Medicago truncatula]
Length = 228
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 95/127 (74%), Positives = 113/127 (88%)
Query: 18 DKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDV 77
D+FPIGMRVLAVDDDPT L +LE LR+CQY VT T++A+TAL ML+EN + FDLVI++V
Sbjct: 6 DRFPIGMRVLAVDDDPTSLLLLETLLRSCQYHVTTTSEAITALTMLQENIDMFDLVIAEV 65
Query: 78 HMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQ 137
HMPDMDG KLLE VGLEMDLPVIMLSA+G+T+LVMK I+HGA D+LLKPVR+EEL+NIWQ
Sbjct: 66 HMPDMDGLKLLELVGLEMDLPVIMLSAHGETELVMKAISHGARDFLLKPVRLEELRNIWQ 125
Query: 138 HVIRRKK 144
HVIR K+
Sbjct: 126 HVIRNKE 132
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/60 (71%), Positives = 53/60 (88%)
Query: 211 KKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKRL 270
K+ + VW+ ELHRKF+ VNQLGVDKAVPKKI DLMNVE +TRE+VA+HLQK+RL+LKR+
Sbjct: 131 KESQFVWSVELHRKFLETVNQLGVDKAVPKKIFDLMNVENITREDVATHLQKYRLFLKRM 190
>gi|297792183|ref|XP_002863976.1| hypothetical protein ARALYDRAFT_357174 [Arabidopsis lyrata subsp.
lyrata]
gi|297309811|gb|EFH40235.1| hypothetical protein ARALYDRAFT_357174 [Arabidopsis lyrata subsp.
lyrata]
Length = 280
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 110/248 (44%), Positives = 156/248 (62%), Gaps = 18/248 (7%)
Query: 20 FPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM 79
FP G+R+L D+D + L++LE L+ QY+VT+ N+ A+ LR +RN FD+ I +
Sbjct: 35 FPEGLRMLVFDEDSSHLQMLETNLQKFQYQVTICNEENKAMYALRNHRNRFDIAIIQGNN 94
Query: 80 PDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
D D F+ L +G EMDLP+I++S + VMK + +GA DYL+KP++ EEL+ I++H+
Sbjct: 95 SDGDMFRFLSEIGSEMDLPIIIISEDKSVQSVMKWMINGATDYLIKPIKPEELRIIFKHL 154
Query: 140 IRRKKVGPKDQNKLLNQENSRVGAGE-----GGQGAMSTGNSDQNGKSNRKRK-DQDGDE 193
+ KKV +E V GE GG+ + S G+S + RKR D +
Sbjct: 155 V--KKV----------RERRSVVTGEAEEKAGGEKSSSVGDSTIRNPNKRKRSMCLDAEV 202
Query: 194 DEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTR 253
+E+ D ++ + + KK RVVWT ELH+KFV AV LG+DKAVPKKIL+LMNVE L+R
Sbjct: 203 NEEDRHDHNDRACAASSKKRRVVWTKELHKKFVDAVEYLGLDKAVPKKILELMNVENLSR 262
Query: 254 ENVASHLQ 261
ENVASHLQ
Sbjct: 263 ENVASHLQ 270
>gi|31338862|dbj|BAC77081.1| B-type response regulator [Oryza glaberrima]
Length = 341
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 108/262 (41%), Positives = 149/262 (56%), Gaps = 7/262 (2%)
Query: 20 FPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM 79
+P G+RVL +DDD + L V+E+ L C Y+VT A+ + +N DLVISD
Sbjct: 7 WPYGLRVLVIDDDCSYLSVMEDLLLKCSYKVTTYKNVREAVPFILDNPQIVDLVISDAFF 66
Query: 80 PDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
P DG +L+ V + +P +++++ GDT VMK + +GA D+LLKPVRIEEL NIWQH+
Sbjct: 67 PTEDGLLILQEVTSKFGIPTVIMASSGDTNTVMKYVANGASDFLLKPVRIEELSNIWQHI 126
Query: 140 IRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDD 199
R++ K+ N + N E G + KS E+E DD
Sbjct: 127 FRKQMQDHKNNNMVGNLEK----PGHPPSILAMARATPATTKSTATEALLAPLENEVRDD 182
Query: 200 DGHEN---EDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENV 256
+ N D +K R+ WT +LHR+F+ AVN LG DKAVPKKIL +M V+ LTRE V
Sbjct: 183 MVNYNGEITDIRDLRKSRLTWTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQV 242
Query: 257 ASHLQKFRLYLKRLSNETPQAG 278
ASHLQK+R+ LK+ T + G
Sbjct: 243 ASHLQKYRMQLKKSIPTTSKHG 264
>gi|75327665|sp|Q7Y0W3.1|EHD1_ORYSI RecName: Full=Two-component response regulator EHD1; AltName:
Full=Protein EARLY HEADING DATE 1
gi|31338860|dbj|BAC77080.1| B-type response regulator [Oryza sativa Indica Group]
Length = 341
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 107/262 (40%), Positives = 150/262 (57%), Gaps = 7/262 (2%)
Query: 20 FPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM 79
+P G+RVL +DDD + L V+E+ L C Y+VT A+ + +N DLVISD
Sbjct: 7 WPYGLRVLVIDDDCSYLSVMEDLLLKCSYKVTTYKNVREAVPFILDNPQIVDLVISDAFF 66
Query: 80 PDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
P DG +L+ V + +P +++++ GDT VMK + +GA D+LLKPVRIEEL NIWQH+
Sbjct: 67 PTEDGLLILQEVTSKFGIPTVIMASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHI 126
Query: 140 IRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDD 199
R++ K+ N + N E G + +S E+E DD
Sbjct: 127 FRKQMQDHKNNNMVGNLEK----PGHPPSILAMARATPATTRSTATEASLAPLENEVRDD 182
Query: 200 DGHENEDSTTQK---KPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENV 256
+ N + T + K R+ WT +LHR+F+ AVN LG DKAVPKKIL +M V+ LTRE V
Sbjct: 183 MVNYNGEITDIRDLGKSRLTWTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQV 242
Query: 257 ASHLQKFRLYLKRLSNETPQAG 278
ASHLQK+R+ LK+ T + G
Sbjct: 243 ASHLQKYRMQLKKSIPTTSKHG 264
>gi|75327667|sp|Q7Y0W5.1|EHD1_ORYSJ RecName: Full=Two-component response regulator EHD1; AltName:
Full=Protein EARLY HEADING DATE 1
gi|31338856|dbj|BAC77078.1| B-type response regulator [Oryza sativa Japonica Group]
Length = 341
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 107/262 (40%), Positives = 150/262 (57%), Gaps = 7/262 (2%)
Query: 20 FPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM 79
+P G+RVL +DDD + L V+E+ L C Y+VT A+ + +N DLVISD
Sbjct: 7 WPYGLRVLVIDDDCSYLSVMEDLLLKCSYKVTTYKNVREAVPFILDNPQIVDLVISDAFF 66
Query: 80 PDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
P DG +L+ V + +P +++++ GDT VMK + +GA D+LLKPVRIEEL NIWQH+
Sbjct: 67 PTEDGLLILQEVTSKFGIPTVIMASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHI 126
Query: 140 IRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDD 199
R++ K+ N + N E G + +S E+E DD
Sbjct: 127 FRKQMQDHKNNNMVGNLEK----PGHPPSILAMARATPATTRSTATEASLAPLENEVRDD 182
Query: 200 DGHENEDSTTQK---KPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENV 256
+ N + T + K R+ WT +LHR+F+ AVN LG DKAVPKKIL +M V+ LTRE V
Sbjct: 183 MVNYNGEITDIRDLGKSRLTWTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQV 242
Query: 257 ASHLQKFRLYLKRLSNETPQAG 278
ASHLQK+R+ LK+ T + G
Sbjct: 243 ASHLQKYRMQLKKSIPTTSKHG 264
>gi|297735376|emb|CBI17816.3| unnamed protein product [Vitis vinifera]
Length = 216
Score = 191 bits (485), Expect = 1e-45, Method: Composition-based stats.
Identities = 104/217 (47%), Positives = 139/217 (64%), Gaps = 20/217 (9%)
Query: 16 DIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVIS 75
D +FP G+RVLAVDD+ CLK+L L C+Y+VT T +A AL+MLRENR NFD+VI+
Sbjct: 11 DGTQFPDGLRVLAVDDNIVCLKILVTLLEQCRYKVTATTKACEALEMLRENRENFDIVIT 70
Query: 76 DVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNI 135
DV MPDMDGF LL+ +GLEMD+PVIM S D V+KGI HGA DYLLKPVR+ E+KNI
Sbjct: 71 DVKMPDMDGFTLLKIIGLEMDIPVIMTSVNDDRSTVLKGIRHGARDYLLKPVRVLEIKNI 130
Query: 136 WQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDE 195
WQHV+R+ ++ + G E + AM S + G + +++D ++
Sbjct: 131 WQHVVRKNLF-----------DSGKPGVKE--EKAMEMEKSKEKGGGEEEEEEEDHPKE- 176
Query: 196 DGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQL 232
H ED + +KK R+ WT ELH KF+ A++QL
Sbjct: 177 ------HSFEDGSVRKKQRLNWTSELHIKFLNAIHQL 207
>gi|31338858|dbj|BAC77079.1| B-type response regulator [Oryza sativa Japonica Group]
Length = 341
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 106/262 (40%), Positives = 149/262 (56%), Gaps = 7/262 (2%)
Query: 20 FPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM 79
+P G+RVL +DDD + L V+E+ L C Y+VT A+ + +N DLVISD
Sbjct: 7 WPYGLRVLVIDDDCSYLSVMEDLLLKCSYKVTTYKNVREAVPFILDNPQIVDLVISDAFF 66
Query: 80 PDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
P DG +L+ V + +P +++++ GDT VMK + +GA D+LLKPVRIEEL NIWQH+
Sbjct: 67 PTEDGLLILQEVTSKFGIPTVIMASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHI 126
Query: 140 IRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDD 199
R++ K+ N + N E G + +S E+E DD
Sbjct: 127 FRKQMQDHKNNNMVGNLEK----PGHPPSILAMARATPATTRSTATEASLAPLENEVRDD 182
Query: 200 DGHENEDSTTQK---KPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENV 256
+ N + T + K R+ WT +LHR+F+ AVN L DKAVPKKIL +M V+ LTRE V
Sbjct: 183 MVNYNGEITDIRDLGKSRLTWTTQLHRQFIAAVNHLREDKAVPKKILGIMKVKHLTREQV 242
Query: 257 ASHLQKFRLYLKRLSNETPQAG 278
ASHLQK+R+ LK+ T + G
Sbjct: 243 ASHLQKYRMQLKKSIPTTSKHG 264
>gi|255539557|ref|XP_002510843.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
gi|223549958|gb|EEF51445.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
Length = 754
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 91/255 (35%), Positives = 150/255 (58%), Gaps = 16/255 (6%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+++L VDDD L ++ + L+ C +V + AL L+ + FDLVI+D+HMP M+
Sbjct: 21 VQILIVDDDAPTLGIVSSMLKTCSLQVVTVKNPLDALSSLQSSDGAFDLVITDLHMPGMN 80
Query: 84 GFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRK 143
G +L + + E +PV+++S+ G +++ + GA Y++KPV + +LKN+WQ+ + K
Sbjct: 81 GIQLQKQIDEEFKIPVVIMSSDGKRSAILESLESGAVYYMVKPVNLRDLKNVWQYAMASK 140
Query: 144 KVG-------PKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDED 196
K P++ + + + + ++S N K K++ +D D+ ED
Sbjct: 141 KGKEVVVAEEPENNDGEASASTEKDSCEDNNSASVSANEESNNKKKKGKKRARDHDQGED 200
Query: 197 GDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENV 256
+ KK +VVWT LH +F+ A+N +G+DKAVPK+IL+ MNV GLTRENV
Sbjct: 201 AP---------SAPKKAKVVWTNSLHNRFLQAINHIGLDKAVPKRILEFMNVPGLTRENV 251
Query: 257 ASHLQKFRLYLKRLS 271
ASHLQK+RL+LK+++
Sbjct: 252 ASHLQKYRLFLKKVA 266
>gi|15239829|ref|NP_199735.1| putative two-component response regulator-like APRR4 [Arabidopsis
thaliana]
gi|52783215|sp|Q9FJ16.1|APRR4_ARATH RecName: Full=Putative two-component response regulator-like APRR4;
AltName: Full=Pseudo-response regulator 4
gi|10177153|dbj|BAB10342.1| unnamed protein product [Arabidopsis thaliana]
gi|332008405|gb|AED95788.1| putative two-component response regulator-like APRR4 [Arabidopsis
thaliana]
Length = 292
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 100/251 (39%), Positives = 154/251 (61%), Gaps = 14/251 (5%)
Query: 20 FPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM 79
FP G+RVL D+DP+ L +LE L+ QY+VT+ N+ A+ LR +RN FDL + V+
Sbjct: 38 FPEGLRVLVFDEDPSYLLILERHLQKFQYQVTICNEVNKAMHTLRNHRNRFDLAMIQVNN 97
Query: 80 PDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
+ D F+ L +G EMDLP+I++S K V K + +GA DYL+KP+R E+L+ +++H+
Sbjct: 98 AEGDIFRFLSEIGSEMDLPIIIISEDDSVKSVKKWMINGAADYLIKPIRPEDLRIVFKHL 157
Query: 140 IRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDD 199
++ K+ + + G E G S+ D ++ K K E E ++
Sbjct: 158 VK----------KMRERRSVVTGEAEKAAGEKSSSVGDSTIRNPNKSKRSSCLEAEVNEE 207
Query: 200 DGHENED---STTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENV 256
D H++ D +++ KK RVVW ELH+ F+ AV+ LG+++AVPKKILD+M V+ ++RENV
Sbjct: 208 DRHDHNDRACASSAKKRRVVWDEELHQNFLNAVDFLGLERAVPKKILDVMKVDYISRENV 267
Query: 257 ASHLQ-KFRLY 266
ASHLQ F +Y
Sbjct: 268 ASHLQVTFLIY 278
>gi|297741112|emb|CBI31843.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 96/253 (37%), Positives = 147/253 (58%), Gaps = 17/253 (6%)
Query: 35 CLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDGFKLLEHVGLE 94
CL ++ LR +Y+V + AL LR + F LV++DVHMP++DGF+ + V E
Sbjct: 33 CLSIVAGILRTRRYQVVTVKNPLDALATLRSGSDFFHLVVTDVHMPELDGFEFQKKVQEE 92
Query: 95 MDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLL 154
LPV+M+SA ++KG+ GA Y++KPV ++LKNIWQ+ VGP+ N +
Sbjct: 93 FQLPVVMMSADDKESSMLKGLEAGAAFYIVKPVNYDDLKNIWQYA-----VGPRKDNSVD 147
Query: 155 NQENSRVGAGEGGQGAMSTGNSDQ---------NGKSNRKRKDQDGDEDEDGDDDGHENE 205
Q+ VG + + D N + KR + +D G EN
Sbjct: 148 MQD---VGPAPEEESPVEKTPDDPVDIESVSSVNEVNQSKRDPKKKASKRVIEDSGKENS 204
Query: 206 DSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRL 265
D+ + K+ +VVWT LH +F+ AV ++G+++AVPK+IL+LMN+ GLTRENVASHLQK+R+
Sbjct: 205 DAVSPKRTKVVWTSALHTRFLEAVRKIGLERAVPKRILELMNMPGLTRENVASHLQKYRI 264
Query: 266 YLKRLSNETPQAG 278
+L+R++ + G
Sbjct: 265 FLRRVAEASNSTG 277
>gi|356573692|ref|XP_003554991.1| PREDICTED: two-component response regulator ARR2-like [Glycine max]
Length = 315
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 105/253 (41%), Positives = 147/253 (58%), Gaps = 25/253 (9%)
Query: 23 GMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDM 82
G+ V+AVDDD T L++++ C Y V + A AL + EN++ D+++ DVH+P+M
Sbjct: 13 GLWVVAVDDDTTILEIIKQMGFKCHYRVATFSDAPDALNYVLENKDRIDVILVDVHLPNM 72
Query: 83 DGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRR 142
DG++ L+H+ E+D+PVI++S G T V K ITHGACDY KP + K +W+HV +
Sbjct: 73 DGYEFLKHINKEIDIPVIIMSVDGSTSAVRKAITHGACDYWTKPFSENQFKIMWKHVAMK 132
Query: 143 KKVGPKDQNKLLNQENSRV-GAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDG 201
K Q K ++ S V A Q +S SN K D D D D
Sbjct: 133 AWNEKKLQKKDFSEFASSVLDANLKDQKEIS---------SNSKESDVD-----DCD--- 175
Query: 202 HENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQ 261
KKPR+ W ELH +FV AV +G+DKA PKKIL++MN+ GLT+++VASHLQ
Sbjct: 176 ------AQPKKPRIAWKGELHCQFVKAVMHIGLDKAQPKKILEVMNIPGLTKDHVASHLQ 229
Query: 262 KFRLYLKRLSNET 274
K+R LK+ SNE
Sbjct: 230 KYRFDLKK-SNEV 241
>gi|147765741|emb|CAN73375.1| hypothetical protein VITISV_019100 [Vitis vinifera]
Length = 659
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 95/246 (38%), Positives = 145/246 (58%), Gaps = 17/246 (6%)
Query: 35 CLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDGFKLLEHVGLE 94
CL ++ LR +Y+V + AL LR + F LV++DVHMP++DGF+ + V E
Sbjct: 33 CLSIVAGILRTRRYQVVTVKNPLDALATLRSGSDFFHLVVTDVHMPELDGFEFQKKVQEE 92
Query: 95 MDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLL 154
LPV+M+SA ++KG+ GA Y++KPV ++LKNIWQ+ VGP+ N +
Sbjct: 93 FQLPVVMMSADDKESSMLKGLEAGAAFYIVKPVNYDDLKNIWQYA-----VGPRKDNSVD 147
Query: 155 NQENSRVGAGEGGQGAMSTGNSDQ---------NGKSNRKRKDQDGDEDEDGDDDGHENE 205
Q+ VG + + D N + KR + +D G EN
Sbjct: 148 MQD---VGPAPEEESPVEKTPDDPVDIESVSSVNEVNQSKRDPKKKASKRVIEDSGKENS 204
Query: 206 DSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRL 265
D+ + K+ +VVWT LH +F+ AV ++G+++AVPK+IL+LMN+ GLTRENVASHLQK+R+
Sbjct: 205 DAVSPKRTKVVWTSALHTRFLEAVRKIGLERAVPKRILELMNMPGLTRENVASHLQKYRI 264
Query: 266 YLKRLS 271
+L+R++
Sbjct: 265 FLRRVA 270
>gi|224130168|ref|XP_002320769.1| pseudo response regulator [Populus trichocarpa]
gi|222861542|gb|EEE99084.1| pseudo response regulator [Populus trichocarpa]
Length = 504
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 104/269 (38%), Positives = 159/269 (59%), Gaps = 13/269 (4%)
Query: 5 ERMGSAGCEDGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLR 64
ER+ S + + FPIG+R+L V+ DPTCL+++ L+A YEVT +A AL++LR
Sbjct: 4 ERVLSVEVTENNAGSFPIGVRILVVESDPTCLRIVSKMLQAFGYEVTTATRATDALRILR 63
Query: 65 ENRNNFDLVISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLL 124
E + +L++ + +PDM+ +++LE +G LP+++ SA + ++ + GA YL+
Sbjct: 64 EKEDEINLILIETRLPDMNQYEILETLGELSSLPIVVFSADNNESAMLGCLYKGAALYLM 123
Query: 125 KPVRIEELKNIWQHVIRRK---KVGPKDQNKLL-NQENSRVGAGEGGQGAMSTGNSDQNG 180
KP+ ++KN+WQ R K V K N + + G + + G +DQ G
Sbjct: 124 KPIIKNDVKNLWQLTYRTKIKTAVSGKGSNSFHGGSSEEKASSVTAGNPSSTMGMTDQKG 183
Query: 181 KSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPK 240
K RK E E+ ++D +N + T KK ++VWT ELH +F+ A+ LG+D A PK
Sbjct: 184 K--RK-------ELEETNNDDEDNNNLTVPKKRKLVWTNELHNRFLQAIRILGIDGAHPK 234
Query: 241 KILDLMNVEGLTRENVASHLQKFRLYLKR 269
KIL MNV GL +ENV+SHLQK+RLYLKR
Sbjct: 235 KILQHMNVPGLKKENVSSHLQKYRLYLKR 263
>gi|224063953|ref|XP_002301318.1| predicted protein [Populus trichocarpa]
gi|222843044|gb|EEE80591.1| predicted protein [Populus trichocarpa]
Length = 458
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 172/288 (59%), Gaps = 20/288 (6%)
Query: 1 MTAEERMGSAGCEDGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTAL 60
MT+E+ + S + F G+R+L V+ DPTCL+++ L+A YEVT +A AL
Sbjct: 1 MTSEQFL-SVEVTKNNASSFAEGVRILVVESDPTCLRIVSKMLQAFGYEVTTATRATDAL 59
Query: 61 KMLRENRNNFDLVISDVHMPDMDGFKLLEHV-GLEMDLPVIMLSAYGDTKLVMKGITHGA 119
+LRE + +L++ + H+PDMD ++++E V + LP+++ SA + ++ + GA
Sbjct: 60 HILREKEDEINLILIETHLPDMDQYEIIETVRAMSSSLPIVVFSADNNVSAMLGWLYKGA 119
Query: 120 CDYLLKPVRIEELKNIWQHVIRRKK------VGPKDQNKLLNQEN-SRVGAGEGGQGAMS 172
YL+KP+ ++KN+WQ R+KK VG + L +EN S V AG + +
Sbjct: 120 ALYLMKPIVKNDVKNLWQLTYRKKKKTAVSSVGSNSFHAGLAEENASSVTAGIPSLLS-T 178
Query: 173 TGNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQL 232
TG SDQ GK RK ++ ++DE +N++ T KKP +VWT ELH +F+ A+ L
Sbjct: 179 TGQSDQMGK--RKELEETDNDDE-------DNDNLTVLKKPELVWTNELHNRFLQAIRIL 229
Query: 233 GVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKRLSNETPQAGMV 280
GVD A PKKIL MNV GL +ENV+SHLQK+RL LKR +T Q M+
Sbjct: 230 GVDGAHPKKILQHMNVSGLKKENVSSHLQKYRLSLKR-EQDTTQKTMI 276
>gi|224136878|ref|XP_002322438.1| type-b response regulator [Populus trichocarpa]
gi|222869434|gb|EEF06565.1| type-b response regulator [Populus trichocarpa]
Length = 716
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 96/271 (35%), Positives = 154/271 (56%), Gaps = 33/271 (12%)
Query: 22 IGMRVLAVDDDPTCLKVLENFLRACQYE---------VTVTNQAVTALKMLRENRNNFDL 72
+ +++L VDDD T L ++ L+ C Y+ VTV N AL LR + FDL
Sbjct: 16 LKIKILVVDDDSTSLSIVSAMLKTCSYKENRKLELFVVTVKN-PFDALSTLRLKKGLFDL 74
Query: 73 VISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEEL 132
V++D+HMP+M+G +L + V E LPVI++S+ K++++ + GA Y++KP+ ++L
Sbjct: 75 VVTDLHMPEMNGMELQQQVDEEFKLPVIIMSSDDSEKVILRTLEGGAAFYIVKPINKDDL 134
Query: 133 KNIWQHVIRRK---------KVGPKDQNK---LLNQENSRVGAGEGGQGAMSTGNSDQNG 180
KN+WQ+ + K ++G ++ + +Q+ S + N
Sbjct: 135 KNVWQYAVATKTGKYSLSIKEIGGSQESSSSTVFDQKISVDEVSSAKSTNIKICNEKDRI 194
Query: 181 KSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPK 240
NRKR +D + D KKP+VVWT LH +F+ A+N +G+DKAVPK
Sbjct: 195 NKNRKRTKEDQEVDSQ-----------LAPKKPKVVWTNSLHSRFLQAINHIGLDKAVPK 243
Query: 241 KILDLMNVEGLTRENVASHLQKFRLYLKRLS 271
+IL+ M+V GL+RENVASHLQK+R++LK+++
Sbjct: 244 RILEFMSVPGLSRENVASHLQKYRIFLKKVA 274
>gi|449446191|ref|XP_004140855.1| PREDICTED: uncharacterized protein LOC101217116 [Cucumis sativus]
Length = 634
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 93/255 (36%), Positives = 149/255 (58%), Gaps = 10/255 (3%)
Query: 19 KFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVH 78
K + + +L VDDD T L ++ LR C+Y+V + AL LR + FDLV++D+H
Sbjct: 4 KLLVDIHILLVDDDATSLAIVSAMLRLCKYQVVTLKDPMEALDTLRARKGYFDLVVTDLH 63
Query: 79 MPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQH 138
MP M+G +L + V E LPVIM+SA +++K + G Y++KP+ ++++K++WQ+
Sbjct: 64 MPQMNGLQLQKKVMQEFKLPVIMMSADEKPSVILKSLEEGVAFYMVKPISLDDVKHVWQY 123
Query: 139 VIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGD 198
I K V P NQ + V Q ++ +S S ++ + +
Sbjct: 124 AITPKNVIP-------NQTTTTVI---QRQLSIDKSSSSSTPCSEKEIIKSKSRSSKFKN 173
Query: 199 DDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVAS 258
+ +N + +K +V+WT LH +F+ A+ +G+ KAVPKKIL+ MNV GLTRENVAS
Sbjct: 174 NKAKQNSINIPIRKSKVIWTNSLHNRFLQAIKLIGLHKAVPKKILEFMNVPGLTRENVAS 233
Query: 259 HLQKFRLYLKRLSNE 273
HLQK+R++LKR++ +
Sbjct: 234 HLQKYRIFLKRVAEK 248
>gi|449528748|ref|XP_004171365.1| PREDICTED: uncharacterized protein LOC101224737 [Cucumis sativus]
Length = 631
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 93/255 (36%), Positives = 149/255 (58%), Gaps = 10/255 (3%)
Query: 19 KFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVH 78
K + + +L VDDD T L ++ LR C+Y+V + AL LR + FDLV++D+H
Sbjct: 4 KLLVDIHILLVDDDATSLAIVSAMLRLCKYQVVTLKDPMEALDTLRARKGYFDLVVTDLH 63
Query: 79 MPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQH 138
MP M+G +L + V E LPVIM+SA +++K + G Y++KP+ ++++K++WQ+
Sbjct: 64 MPQMNGLQLQKKVMQEFKLPVIMMSADEKPSVILKSLEEGVAFYMVKPISLDDVKHVWQY 123
Query: 139 VIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGD 198
I K V P NQ + V Q ++ +S S ++ + +
Sbjct: 124 AITPKNVIP-------NQTTTTVIQ---RQLSIDKSSSSSTPCSEKEIIKSKSRSSKFKN 173
Query: 199 DDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVAS 258
+ +N + +K +V+WT LH +F+ A+ +G+ KAVPKKIL+ MNV GLTRENVAS
Sbjct: 174 NKAKQNSINIPIRKSKVIWTNSLHNRFLQAIKLIGLHKAVPKKILEFMNVPGLTRENVAS 233
Query: 259 HLQKFRLYLKRLSNE 273
HLQK+R++LKR++ +
Sbjct: 234 HLQKYRIFLKRVAEK 248
>gi|255541448|ref|XP_002511788.1| sensor histidine kinase, putative [Ricinus communis]
gi|223548968|gb|EEF50457.1| sensor histidine kinase, putative [Ricinus communis]
Length = 437
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/250 (36%), Positives = 143/250 (57%), Gaps = 9/250 (3%)
Query: 23 GMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDM 82
G+ +L VD D CL ++ L Y+V +A AL +LRE + DL++++VH+PDM
Sbjct: 18 GVSILVVDCDSACLAIVSKMLYISGYKVITAKRATDALHILRERQYELDLILTEVHLPDM 77
Query: 83 DGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI-- 140
D ++LLE + LP+++LSA D ++ + GA YLLKP+ + ++K++WQ
Sbjct: 78 DKYELLETMAEVSCLPIVILSADDDENAMLGCLFKGAVFYLLKPITMNDVKSLWQFSCVK 137
Query: 141 -RRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDD 199
R+ V + + + + E + S QN + + ++ Q+ D+DE+
Sbjct: 138 NRKNNVATEGSHSYHGHSTPEIASNEASECLSVLDTSQQNAQKSEGKELQEMDKDEEA-- 195
Query: 200 DGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASH 259
ST KKP+++WT ELH +F+ A+ LG+D A PKKIL MNV GL +EN++SH
Sbjct: 196 ----TVTSTFPKKPKLIWTNELHDRFLQAIRILGIDSAHPKKILKHMNVPGLRKENISSH 251
Query: 260 LQKFRLYLKR 269
LQK+RL LKR
Sbjct: 252 LQKYRLSLKR 261
>gi|294461183|gb|ADE76155.1| unknown [Picea sitchensis]
Length = 465
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 95/196 (48%), Positives = 126/196 (64%), Gaps = 24/196 (12%)
Query: 98 PVIMLSAY----GDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKL 153
P I++SA GDT +VMKGITHGACDY +KP+RIEEL+NIWQHV+RR+
Sbjct: 7 PWIIVSAVMSTNGDTSVVMKGITHGACDYFIKPIRIEELRNIWQHVVRRR---------- 56
Query: 154 LNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKP 213
+E+ + GE SD +++KRKD GD +D ++ K+
Sbjct: 57 -GRESLKDDLGE----CEDREASDSPETTSKKRKDTSS-----GDFSDEVIDDISSLKRA 106
Query: 214 RVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKRLSNE 273
RV WT +LH++FV AVNQLG+DKAVPKKI+++M V+GL+RENVASHLQK+RLYLKRLS
Sbjct: 107 RVHWTVQLHQQFVVAVNQLGIDKAVPKKIVEIMKVQGLSRENVASHLQKYRLYLKRLSGA 166
Query: 274 TPQAGMVAALGSKDSS 289
+ VA+ + D S
Sbjct: 167 ISEPYPVASFQAADDS 182
>gi|147782854|emb|CAN61302.1| hypothetical protein VITISV_003290 [Vitis vinifera]
Length = 594
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 95/290 (32%), Positives = 152/290 (52%), Gaps = 63/290 (21%)
Query: 23 GMRVLAVDDDPTCLKVLENFLRACQYE--------------------------------- 49
+RV+ VDDD CL ++ L+ +Y+
Sbjct: 20 AIRVMVVDDDIICLSIVAGMLKTWKYQDMLNVVFCNFIKIIRQGCIRGEEASTRNGISSS 79
Query: 50 -VTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDT 108
V+V N A AL LR N F LV++DVHMP MDGF+ + V E +LPV+M+SA
Sbjct: 80 VVSVKN-AEDALITLRTRSNFFHLVVTDVHMPKMDGFEFQKQVREEFNLPVVMMSADDKE 138
Query: 109 KLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQ 168
+++G+ GA Y++KPV ++LK++WQ+ + +K
Sbjct: 139 SSILRGLEAGAAFYIVKPVNYDDLKDLWQYALSPRK------------------------ 174
Query: 169 GAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGA 228
G++S + + K + K+K G + +G++ E ++ +K +VVWT LH F+ A
Sbjct: 175 GSVSVXHEEMQNKRDSKKKA--GKKVNEGNE--QEKSEAIVPRKSKVVWTTALHNDFLEA 230
Query: 229 VNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKRLSNETPQAG 278
+ ++G+++AVPK+IL+ MN GLTRENVASHLQK+R++LKR++ + G
Sbjct: 231 IRKIGLERAVPKRILEHMNEPGLTRENVASHLQKYRIFLKRVTEASSSDG 280
>gi|224120138|ref|XP_002318254.1| type-b response regulator [Populus trichocarpa]
gi|222858927|gb|EEE96474.1| type-b response regulator [Populus trichocarpa]
Length = 658
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 86/256 (33%), Positives = 142/256 (55%), Gaps = 8/256 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYE--------VTVTNQAVTALKMLRENRNNFDLVIS 75
+ +L VDDD T L V+ L+ Y+ V + AL +LR + FDLV+S
Sbjct: 17 IHILIVDDDSTSLSVVSATLKTVSYKDNRNLELIVVTVKKPFDALSILRLKKGLFDLVVS 76
Query: 76 DVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNI 135
D+HMP+M+G +L + V E LPVI++S+ ++ + + GA Y++KP +LKN+
Sbjct: 77 DLHMPEMNGMELQKQVEEEFKLPVIIMSSDESKNVISRSLEGGAAFYIVKPANKVDLKNV 136
Query: 136 WQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDE 195
W + + K ++ + + ++ NS + ++ + E+
Sbjct: 137 WHYAVAIKTGNSLSIKEIEGSREPSYSSTLVERLSLEDVNSATSINDEKRYRKNGRKEER 196
Query: 196 DGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTREN 255
D E + KKP+VVWT LH +F+ A+N +G+DKAVPK+IL+ M+V GL+REN
Sbjct: 197 KSTKDDQEVDSQPASKKPKVVWTNSLHNRFLLALNHIGLDKAVPKRILECMSVRGLSREN 256
Query: 256 VASHLQKFRLYLKRLS 271
+ASHLQK+R++LK+++
Sbjct: 257 IASHLQKYRIFLKKVA 272
>gi|297821174|ref|XP_002878470.1| hypothetical protein ARALYDRAFT_486765 [Arabidopsis lyrata subsp.
lyrata]
gi|297324308|gb|EFH54729.1| hypothetical protein ARALYDRAFT_486765 [Arabidopsis lyrata subsp.
lyrata]
Length = 431
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 100/258 (38%), Positives = 141/258 (54%), Gaps = 28/258 (10%)
Query: 16 DIDKFPI-GMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVI 74
D ++FP +RVL VD D L ++N + Y+VT A+ L +N+ DLVI
Sbjct: 32 DDEEFPTTSIRVLLVDADSNSLLPMKNLMIQYSYQVTKYEDGEEAMAFLMKNKQEIDLVI 91
Query: 75 SDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKN 134
D HMPD++G L +G EMDLPV+++S + VM+ I +GACD+L+KPV E +
Sbjct: 92 WDFHMPDINGLDALNTIGKEMDLPVVIMSHDHKKETVMESIKYGACDFLVKPVSKEVIAV 151
Query: 135 IWQHVIRRKKVGPKDQNKLLNQENSRVG---AGEGGQGAMSTGNSDQNGKSNRKRKDQDG 191
+W+HV R++ S+ G GE G D G+ N + +++G
Sbjct: 152 LWRHVYRKRM--------------SKSGLDKPGESGTVESDPDEYDDLGQDNLYQSNEEG 197
Query: 192 DEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLG-VDKAVPKKILDL----M 246
++ D G + KKPR+ WT ELH KF AV +LG ++KA PK IL M
Sbjct: 198 SKNS-SDQKG----EKPATKKPRMQWTTELHHKFEVAVEKLGSLEKAFPKTILKYMQEEM 252
Query: 247 NVEGLTRENVASHLQKFR 264
NV+GLTR NVASHLQK+R
Sbjct: 253 NVQGLTRNNVASHLQKYR 270
>gi|413943651|gb|AFW76300.1| putative two-component response regulator family protein [Zea mays]
Length = 378
Score = 165 bits (417), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 83/172 (48%), Positives = 123/172 (71%), Gaps = 10/172 (5%)
Query: 101 MLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKVGPKDQ--NKLLNQEN 158
+LSA +T+ +MKGI HGACDY++KPVR+E+L+ IW HV++ + P+ + + +
Sbjct: 15 VLSANSETRTIMKGIKHGACDYIVKPVRLEQLRGIWTHVVKNSRTDPRTSIIDSGSDDDV 74
Query: 159 SRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWT 218
++ +G+GG+G D+ G + RK+K ++ GH +E+++ QKKPRV W
Sbjct: 75 QKLPSGDGGEG-------DKVGANRRKKKCSKKNKPAVDVAGGH-SENTSAQKKPRVQWC 126
Query: 219 PELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKRL 270
+LHRKFV AV+Q+G+DKAVPKKIL+ MNVEG+TRENVASHLQK+R+YL++L
Sbjct: 127 GQLHRKFVEAVHQIGIDKAVPKKILEAMNVEGITRENVASHLQKYRIYLRKL 178
>gi|413935897|gb|AFW70448.1| putative two-component response regulator family protein [Zea mays]
Length = 545
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 147/406 (36%), Positives = 216/406 (53%), Gaps = 53/406 (13%)
Query: 174 GNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLG 233
G ++N + +RK +D +GD+ +D DD+ +EN DS++QKKPRVVW+ ELHRKFV AVNQLG
Sbjct: 87 GGVNRNKRISRKGRDDNGDDGDDSDDNSNENGDSSSQKKPRVVWSVELHRKFVAAVNQLG 146
Query: 234 VDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKRLS-NETPQAGMVAALGSKDSSYLR 292
+DKAVPKKILDLMNVE +TRENVASHLQK+RLYLKRLS + + QA + AA G ++ +Y+
Sbjct: 147 IDKAVPKKILDLMNVENITRENVASHLQKYRLYLKRLSADASRQANLTAAFGGRNPAYVN 206
Query: 293 IGALDGFGDLRSLNSPGRLSSSAISSSYVPGNMFGRFNSTSGLSMHGIASSGMIQPGHSQ 352
+G LD F R N+ GR ++ P N+ R NS + MHG+ S +Q GH+Q
Sbjct: 207 MG-LDAF---RQYNAYGRYRPVPTTNHSQPNNLLARMNSPA-FGMHGLLPSQPLQIGHNQ 261
Query: 353 -SFNTSFNTIGK------IQQA---------MFPANRISNLFQGVRTSSEL---NQLP-- 391
+ +TS +G I+ A FP N F + S++L N LP
Sbjct: 262 NNLSTSLGNVGGMNNGNLIRGAHMPLQDTSKCFPTGPSGNSFANISNSTQLVTTNNLPLQ 321
Query: 392 --QSKSTTQIGDFNHINSPTTSMAATGFTDATVAVGSSSSSVSTSSSNIMMLQGNLHQAH 449
+ + +G + P S A + +++ + SSSN+ +
Sbjct: 322 SLEPSNQQHLGRLHSSADPFNSFVGEPPQFADLGRCNTTWPTAVSSSNV-------QEIG 374
Query: 450 SRDAYGNQSSLS-VASLNQESFDVGVRNSSNFLDHSRCNESWQDAVQLSSNSLPLSEPFI 508
+D N+ L ++S + S + + S +S Q A L+SN LP+ PF
Sbjct: 375 QKDRIVNRPKLEPLSSFTEASSQIPLLGSE--------MQSHQVA-SLASNGLPM--PFT 423
Query: 509 HDQMPPNLRNTLSSTSCLD----ISSSMATSTHLEDSRGDLSCQPG 550
+ +P ++ +S L+ +S+S ST L + R D S PG
Sbjct: 424 QEAVPFAYGSSTNSREMLNNNLALSNSGVNST-LPNLRIDGSVVPG 468
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 29/35 (82%)
Query: 15 GDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYE 49
G D+FP+GMRVLAVDDDPTCLK+LEN L CQY
Sbjct: 17 GAKDQFPVGMRVLAVDDDPTCLKILENLLLRCQYH 51
>gi|109631198|gb|ABG35775.1| SRR383 [Striga asiatica]
Length = 456
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 97/190 (51%), Positives = 128/190 (67%), Gaps = 6/190 (3%)
Query: 110 LVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQG 169
+VMKG+THGACDYL+KPVR+E LKNIWQHVIR+KK + +E + G+ E +
Sbjct: 2 VVMKGVTHGACDYLIKPVRMEALKNIWQHVIRKKK------YEWKEKEQEQSGSVEESER 55
Query: 170 AMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAV 229
+ D + +N + + +D DD+G E +D++T KKPRVVW+ ELH++FV AV
Sbjct: 56 QPKPEDLDYSSSANEGNNWKSSKKRKDDDDEGDERDDTSTLKKPRVVWSVELHQQFVTAV 115
Query: 230 NQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKRLSNETPQAGMVAALGSKDSS 289
NQLG+DKAVPKKIL+LM++ GLTRENVASHLQK+RLYLKRLS + +G D S
Sbjct: 116 NQLGIDKAVPKKILELMSIPGLTRENVASHLQKYRLYLKRLSGQHHNGLGNPFMGPTDPS 175
Query: 290 YLRIGALDGF 299
+ I L F
Sbjct: 176 FGPITPLSSF 185
>gi|51038103|gb|AAT93906.1| hypothetical protein [Oryza sativa Japonica Group]
gi|222631502|gb|EEE63634.1| hypothetical protein OsJ_18451 [Oryza sativa Japonica Group]
Length = 368
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 101/267 (37%), Positives = 138/267 (51%), Gaps = 73/267 (27%)
Query: 21 PIGMRVLAVDDDPTCLKVLENFLRACQYE-VTVTNQAVT----------------ALKML 63
P+GMRVL +D+ T LK++ L C Y+ +TVTN +T A++ L
Sbjct: 22 PVGMRVLLIDESTTYLKIITKLLLNCGYKGLTVTNFEITYVWRVDEVTPKTAARDAVEEL 81
Query: 64 RENRNNFDLVISDVHMP-DMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDY 122
EN ++D+V+++VH P +DGF LL++ G +MDLPV++ SA D + V+K + GACDY
Sbjct: 82 HENPWSYDMVLTEVHAPAGIDGFNLLQYAGTDMDLPVVVFSADDDKRTVLKCVNSGACDY 141
Query: 123 LLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKS 182
L+KP+R EELKNIWQHV RRK GG+ A + GNS
Sbjct: 142 LVKPLRHEELKNIWQHVYRRK-------------------LRSGGRRAAAAGNS------ 176
Query: 183 NRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKI 242
S + K R W ELH +FV V QLGVDKA P +I
Sbjct: 177 ------------------------SKGEIKKRFRWPKELHERFVSVVLQLGVDKATPNQI 212
Query: 243 LDLMNVEGLTRENVASHLQKFRLYLKR 269
L L+N E LTR+ Q+FR+ L +
Sbjct: 213 LPLLNREDLTRD------QRFRIALTK 233
>gi|412992344|emb|CCO20057.1| type-b response regulator [Bathycoccus prasinos]
Length = 580
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/163 (50%), Positives = 107/163 (65%), Gaps = 2/163 (1%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+RVL VDDD CLK++ L+ C Y VT T +VTAL+ LR + FD+V+SDVHMPDMD
Sbjct: 12 LRVLVVDDDVLCLKIVTKMLQKCGYTVTSTTSSVTALEYLRTKKEEFDIVLSDVHMPDMD 71
Query: 84 GFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRK 143
GFKLLE + L++D+PV+M+S D +V++GI HGA DYLLKPVRI ELKNIWQHV+R+
Sbjct: 72 GFKLLEQIALDIDIPVLMMSVNADQSVVLRGIIHGAVDYLLKPVRIHELKNIWQHVVRKN 131
Query: 144 KVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKR 186
GP + + S +G G S N+ NG K+
Sbjct: 132 --GPDSLQRSGSMSMSPARSGRGSPEKDSGMNATSNGTHMNKK 172
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 51/60 (85%), Positives = 58/60 (96%)
Query: 211 KKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKRL 270
KKPRVVW+ ELH++FV AVNQLG+DKAVPK+ILDLMNV+GLTRENVASHLQK+RLYLKRL
Sbjct: 340 KKPRVVWSAELHQQFVNAVNQLGIDKAVPKRILDLMNVQGLTRENVASHLQKYRLYLKRL 399
>gi|147798455|emb|CAN72192.1| hypothetical protein VITISV_005693 [Vitis vinifera]
Length = 790
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 102/264 (38%), Positives = 149/264 (56%), Gaps = 29/264 (10%)
Query: 26 VLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDGF 85
VL VD DPT L + LRA Y+V + AL M+ E ++ DLV++++HMPDMDG
Sbjct: 23 VLVVDCDPTSLMTISGMLRALTYQVVTVERVTDALAMILERKDEVDLVMTELHMPDMDGL 82
Query: 86 KLLEHVGLEMDLPVI------------MLSAYGDTKLVMKGITHGACDYLLKPVRIEELK 133
+LL+ + LPV+ ++SA + +++ + GA Y+ KPV + +K
Sbjct: 83 QLLDEIQKTSKLPVVNFFFFLDGNGNPVMSADAEEDAMLRSLNKGATYYMXKPVEMGSIK 142
Query: 134 NIWQHVI--RR----KKVGPKD--QNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRK 185
N+WQ+V RR +K G K Q + L + S V AG A+ + NGK +
Sbjct: 143 NLWQYVFLNRRDKQLQKTGQKGGVQVESLGENESDVDAG----SALIS-----NGKHGYQ 193
Query: 186 RKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDL 245
D E + DDD + S +KK ++ WT ELH KF+ A+ +LG+D A PKKIL L
Sbjct: 194 EPTTDTVETDKDDDDEEDTLTSPIRKKAKLTWTTELHDKFLLAIGELGLDNAHPKKILHL 253
Query: 246 MNVEGLTRENVASHLQKFRLYLKR 269
M VEGLT+E+++SHLQK+RL +KR
Sbjct: 254 MGVEGLTKEHISSHLQKYRLSVKR 277
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 77/119 (64%)
Query: 26 VLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDGF 85
VL VD DPTCL ++ LRA YEV ++AV AL M E DLV++++HMPDM G
Sbjct: 523 VLVVDCDPTCLMIVSGMLRALTYEVLTVDRAVDALAMTLEGGCGVDLVMTELHMPDMYGL 582
Query: 86 KLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKK 144
LL+ + LPV+++SA + +++K + GA YL+KPV +E++ N WQ+V +R++
Sbjct: 583 DLLDEIRRTSKLPVVIMSADSNEDVMLKSLRRGAEYYLVKPVLMEDVTNFWQYVFKRRR 641
>gi|50400667|sp|Q9LZJ8.1|ARR20_ARATH RecName: Full=Putative two-component response regulator ARR20
gi|7362747|emb|CAB83117.1| putative protein [Arabidopsis thaliana]
Length = 426
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 99/264 (37%), Positives = 145/264 (54%), Gaps = 28/264 (10%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
RVL V D L+N + Y+VT A+ L +N++ DLVI D HMPD++G
Sbjct: 42 RVLLVGADSN--SSLKNLMTQYSYQVTKYESGEEAMAFLMKNKHEIDLVIWDFHMPDING 99
Query: 85 FKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKK 144
L +G +MDLPV+++S + VM+ I +GACD+L+KPV E + +W+HV R++
Sbjct: 100 LDALNIIGKQMDLPVVIMSHEYKKETVMESIKYGACDFLVKPVSKEVIAVLWRHVYRKRM 159
Query: 145 VGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDD--GH 202
S+ G + G+ + D+ + +D + +E+G + H
Sbjct: 160 --------------SKSGLDKPGESGTVESDPDE---YDDLEQDNLYESNEEGSKNTCDH 202
Query: 203 ENEDSTTQKKPRVVWTPELHRKFVGAVNQLG-VDKAVPKKILDLM----NVEGLTRENVA 257
+ E S T KKPR+ WTPELH KF AV ++G ++KA PK IL M NV+GLTR NVA
Sbjct: 203 KEEKSPT-KKPRMQWTPELHHKFEVAVEKMGSLEKAFPKTILKYMQEELNVQGLTRNNVA 261
Query: 258 SHLQKFRLYLKR-LSNETPQAGMV 280
SHLQK+R K+ + + PQ V
Sbjct: 262 SHLQKYRQSSKKTCTPQEPQEDFV 285
>gi|212275528|ref|NP_001130318.1| uncharacterized protein LOC100191412 [Zea mays]
gi|194688832|gb|ACF78500.1| unknown [Zea mays]
Length = 471
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 154/506 (30%), Positives = 243/506 (48%), Gaps = 75/506 (14%)
Query: 202 HENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQ 261
E ++ + KKPRVVW+ ELHRKFV AVNQLG+DKAVPK+IL+LMNVE LTRENVASHLQ
Sbjct: 15 QEGDEPSAAKKPRVVWSIELHRKFVAAVNQLGIDKAVPKRILELMNVEKLTRENVASHLQ 74
Query: 262 KFRLYLKRLSN-ETPQAGMVAALGSKDSSYLRIGALDGFGDLRSLNSPGRLSSSAISSSY 320
K+RLYLKRLS + QA +VAA G +D +L +GA +G L S + A SS+
Sbjct: 75 KYRLYLKRLSAVASQQASIVAAFGGRD-PFLHMGAFEG------LQSYQPFAPCAALSSF 127
Query: 321 VP---------GNMFGRFNSTSGLSMHGIASSGMIQPGHSQSFNTSFNTIGKIQQAMFPA 371
+P FG +++ AS+GMI H + F G IQ+
Sbjct: 128 IPHHGSLGRTTAAAFGVPELAPAITVQAAASNGMIS--HCAGDASKFQLSG-IQE----- 179
Query: 372 NRISNLFQGVRTSSELNQLPQSKSTTQIGDFNHINSPTTSMAATGFTDATVAVGSSSSSV 431
N+ NL QG TS L QL Q + GD + + F+ + +A + S ++
Sbjct: 180 NQQPNLGQGSATSLGLPQLQQKWIQQETGDLSAV-----------FSGSALA-NTLSGAL 227
Query: 432 STSSSNIMMLQGNLHQAHSRDAYGNQSSLSVASLNQESFDVGVRNSSNFLDHSRCNESWQ 491
+S+ + Q L ++ Q +++AS++ E + V S+N Q
Sbjct: 228 QRVASSPLPPQELLEGVQTK--VSAQPPITMASVSSELVERTVGVSANL----------Q 275
Query: 492 DAVQLSSNSLPLSEPFIHDQMPPNLRNTLSSTSCLDISSSMATS-----THLEDSRGDL- 545
D+ +LP+++ F D++ L++ S + S +M T +++G
Sbjct: 276 DSGISPQGTLPINDGFTADKL--QLQDPFDSNGGTNFSVNMPVCPSGSLTASSNAKGGAS 333
Query: 546 SCQPGLIGNVIQNYTSKQQWLEHKQGYNQNLNNPFSNV--NTLLSGNCTMG---PFSQSM 600
SC P L+ +++ Q+ G N + +++ + L G T G F M
Sbjct: 334 SCSPVLLAPDTGRHSNYLQF-----GVAGNSGHDMNDIKQDHLHQGLSTGGFNHDFGTCM 388
Query: 601 DQSNSPYIAQLTGVEKAPLNT-----KLRSNDDFLLEQSKSHDGFIQNNYDPMDDMMSGI 655
+ P + L K NT KL+ + + L K H GF ++ + D +++ +
Sbjct: 389 TEQTDPNVPYLMPQMKP--NTLSSEDKLKQRNIYDLGIPKLHGGFSSSSCN-FDGLLNSM 445
Query: 656 LKRDSNETILMDGELGFDAYSLSSCM 681
+K + ++ D +LG D + L +C+
Sbjct: 446 IKAEKDDLSFTDSDLGCDFFPLGACI 471
>gi|242034251|ref|XP_002464520.1| hypothetical protein SORBIDRAFT_01g019980 [Sorghum bicolor]
gi|241918374|gb|EER91518.1| hypothetical protein SORBIDRAFT_01g019980 [Sorghum bicolor]
Length = 302
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 83/200 (41%), Positives = 117/200 (58%), Gaps = 4/200 (2%)
Query: 71 DLVISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIE 130
DL+ISDV P D +L+ V + D+P +++S+ GD +VMK IT GA D+L+KPVRIE
Sbjct: 12 DLIISDVCFPTEDSLLILQEVTTKFDIPTVIMSSNGDASIVMKYITSGASDFLIKPVRIE 71
Query: 131 ELKNIWQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQD 190
LKNIWQHV R++ +G Q +V A + + +
Sbjct: 72 VLKNIWQHVFRKQLIGENRSCSNSAQHLDQVSYPPTIAPASTCATRTTGIITEAATATLE 131
Query: 191 GDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEG 250
E + + +D +K R+ WT +LHR+F+ AVN LG +KAVPKKIL+ M V+
Sbjct: 132 SATRETTNGTVTDIQD---LRKSRLSWTTQLHRQFIAAVNSLG-EKAVPKKILETMKVKH 187
Query: 251 LTRENVASHLQKFRLYLKRL 270
LTRE VASHLQK+RL+L++L
Sbjct: 188 LTREQVASHLQKYRLHLRKL 207
>gi|224120142|ref|XP_002318255.1| predicted protein [Populus trichocarpa]
gi|222858928|gb|EEE96475.1| predicted protein [Populus trichocarpa]
Length = 623
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/228 (33%), Positives = 129/228 (56%)
Query: 44 RACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDGFKLLEHVGLEMDLPVIMLS 103
R + V + AL +LR + FDLV+SD+HMP+M+G +L + V E LPVI++S
Sbjct: 10 RNLELIVVTVKKPFDALSILRLKKGLFDLVVSDLHMPEMNGMELQKQVEEEFKLPVIIMS 69
Query: 104 AYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRVGA 163
+ ++ + + GA Y++KP +LKN+W + + K ++ +
Sbjct: 70 SDESKNVISRSLEGGAAFYIVKPANKVDLKNVWHYAVAIKTGNSLSIKEIEGSREPSYSS 129
Query: 164 GEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHR 223
+ ++ NS + ++ + E+ D E + KKP+VVWT LH
Sbjct: 130 TLVERLSLEDVNSATSINDEKRYRKNGRKEERKSTKDDQEVDSQPASKKPKVVWTNSLHN 189
Query: 224 KFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKRLS 271
+F+ A+N +G+DKAVPK+IL+ M+V GL+REN+ASHLQK+R++LK+++
Sbjct: 190 RFLLALNHIGLDKAVPKRILECMSVRGLSRENIASHLQKYRIFLKKVA 237
>gi|50400670|sp|Q9M9B9.2|ARR19_ARATH RecName: Full=Putative two-component response regulator ARR19
Length = 407
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/281 (33%), Positives = 153/281 (54%), Gaps = 25/281 (8%)
Query: 17 IDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISD 76
+ +FP VL VD + T L ++ ++ Y+V++ A AL L ++ ++VI D
Sbjct: 27 LSQFPGNTNVLVVDTNFTTLLNMKQIMKQYAYQVSIETDAEKALAFLTSCKHEINIVIWD 86
Query: 77 VHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIW 136
HMP +DG + L+ + ++DLPV+++S T+ VMK +GACDY++KPV+ E + NIW
Sbjct: 87 FHMPGIDGLQALKSITSKLDLPVVIMSDDNQTESVMKATFYGACDYVVKPVKEEVMANIW 146
Query: 137 QHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMS----TGNSDQNGKSNRKRKDQDGD 192
QH++R++ + D + R+ E Q S T D++ + +G
Sbjct: 147 QHIVRKRLIFKPD----VAPPKPRMTWSEVFQPVQSHLVPTDGLDRDHFDSITINGGNGI 202
Query: 193 EDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQL-GVDKAVPKKILDL---MNV 248
++ E + +KPR+ WT ELH+KF+ A+ + G++KA PK +++ M +
Sbjct: 203 QN-------MEKKQGKKPRKPRMTWTEELHQKFLEAIEIIGGIEKANPKVLVECLQEMRI 255
Query: 249 EGLTRENVASHLQKFRLYLKRLSNETPQA----GMVAALGS 285
EG+TR NVASHLQK R+ L+ N+ PQ G A G+
Sbjct: 256 EGITRSNVASHLQKHRINLEE--NQIPQQTQGNGWATAYGT 294
>gi|297741111|emb|CBI31842.3| unnamed protein product [Vitis vinifera]
Length = 520
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 80/204 (39%), Positives = 128/204 (62%), Gaps = 8/204 (3%)
Query: 79 MPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQH 138
MP+MDGF+ V E LPV+M+SA +++G+ GA Y++KPV ++LKN+WQ+
Sbjct: 1 MPEMDGFEFQRLVHEEFHLPVVMMSADDKESSMLRGLEAGAAFYIVKPVNYDDLKNLWQY 60
Query: 139 VIRRKKVGPKD-QNKLLNQENSRV-GAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDED 196
VGPK ++ ++ QE R GA + + + + S N + + KR + +
Sbjct: 61 A-----VGPKKGKSHIVMQEIERTQGASQLEKTSNNEVESLMNEEKHNKRDSKRKTLKKA 115
Query: 197 GDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENV 256
+ +G E ++ KK +V+WT LH +F+ A ++G+++AVPK+IL++MNV GLTRENV
Sbjct: 116 NEGNGKEKSETVAPKKAKVIWTSALHNRFLEAARKIGLERAVPKRILEIMNVPGLTRENV 175
Query: 257 ASHLQKFRLYLKRLSNETPQAGMV 280
ASHLQK+R++LKR+ ET +G +
Sbjct: 176 ASHLQKYRIFLKRVM-ETSSSGTI 198
>gi|334186214|ref|NP_191826.2| putative two-component response regulator ARR20 [Arabidopsis
thaliana]
gi|332646857|gb|AEE80378.1| putative two-component response regulator ARR20 [Arabidopsis
thaliana]
Length = 352
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 131/229 (57%), Gaps = 26/229 (11%)
Query: 60 LKMLRENRNNFDLVISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGA 119
+ L +N++ DLVI D HMPD++G L +G +MDLPV+++S + VM+ I +GA
Sbjct: 1 MAFLMKNKHEIDLVIWDFHMPDINGLDALNIIGKQMDLPVVIMSHEYKKETVMESIKYGA 60
Query: 120 CDYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQN 179
CD+L+KPV E + +W+HV R++ S+ G + G+ + D+
Sbjct: 61 CDFLVKPVSKEVIAVLWRHVYRKRM--------------SKSGLDKPGESGTVESDPDE- 105
Query: 180 GKSNRKRKDQDGDEDEDGDDDG--HENEDSTTQKKPRVVWTPELHRKFVGAVNQLG-VDK 236
+ +D + +E+G + H+ E S T KKPR+ WTPELH KF AV ++G ++K
Sbjct: 106 --YDDLEQDNLYESNEEGSKNTCDHKEEKSPT-KKPRMQWTPELHHKFEVAVEKMGSLEK 162
Query: 237 AVPKKILDLM----NVEGLTRENVASHLQKFRLYLKR-LSNETPQAGMV 280
A PK IL M NV+GLTR NVASHLQK+R K+ + + PQ V
Sbjct: 163 AFPKTILKYMQEELNVQGLTRNNVASHLQKYRQSSKKTCTPQEPQEDFV 211
>gi|357521359|ref|XP_003630968.1| Two-component response regulator ARR11 [Medicago truncatula]
gi|355524990|gb|AET05444.1| Two-component response regulator ARR11 [Medicago truncatula]
Length = 674
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/276 (34%), Positives = 141/276 (51%), Gaps = 38/276 (13%)
Query: 20 FPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM 79
FP ++VL +D D L +E L Y+VT +A+ ++ + + +FDLV+ + M
Sbjct: 9 FPANVKVLVIDHDIHLLNAIEKKLSQFNYQVTTCWTVSSAMNLIAQ-KVHFDLVLLETQM 67
Query: 80 PDMDGFKLLEHVGLEMDLPVIM-LSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQH 138
PDMD F L+ + ++D+PVIM + + G T ++ I +GACD +KP ++K +W H
Sbjct: 68 PDMDSFDFLQQLTQQIDIPVIMTMCSEGSTTGILNAIENGACDCWVKPFSENQVKYMWHH 127
Query: 139 VIRRKKVGPKDQ--NKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQD---GDE 193
+R+ G K Q N+ L E S++ R R D + DE
Sbjct: 128 AVRKMMKGNKKQKINEQLGVEGSQI----------------------RARDDSNLCLNDE 165
Query: 194 D---EDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVD------KAVPKKILD 244
D + + + KK RVVW+ ELH +F+ AV +L KAVPK IL+
Sbjct: 166 DIPEPPPTKKTKKRKKTKKTKKERVVWSLELHEQFMKAVKELDASSSSSSSKAVPKTILE 225
Query: 245 LMNVEGLTRENVASHLQKFRLYLKRLSNETPQAGMV 280
M V GLTRE V SHLQK+RLYL + E QA +V
Sbjct: 226 HMKVPGLTREQVGSHLQKYRLYLNKHQQEHEQALLV 261
>gi|357503493|ref|XP_003622035.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|355497050|gb|AES78253.1| Two-component response regulator ARR1 [Medicago truncatula]
Length = 602
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/237 (33%), Positives = 128/237 (54%), Gaps = 26/237 (10%)
Query: 50 VTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTK 109
V A AL L+EN FDLVI++ H+ M+G + +H+ + +P+IM+S
Sbjct: 17 VVTAKDARHALITLQENEGLFDLVITEFHLVGMNGLEFQKHIKDQFQIPIIMMSEDNRPS 76
Query: 110 LVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQG 169
L+ K + +GA Y++KP E+ K+IW++V+ KK KL +
Sbjct: 77 LISKTLENGAAQYIVKPFCAEDFKDIWKYVMEGKK------EKLFIE------------- 117
Query: 170 AMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAV 229
++ N ++ S + + +D KK ++VWTP LH+ F+ AV
Sbjct: 118 SLFVRNEEEETSS---EPKNKKKHCKRKSKESQGEKDIQVVKKQKLVWTPYLHKMFLLAV 174
Query: 230 NQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKRLSNETPQAGMVAALGSK 286
NQ+G++KAVPKKIL++MN+ LTRENVASHLQK+R++L+ + + GMV + +
Sbjct: 175 NQIGLEKAVPKKILEIMNIPNLTRENVASHLQKYRIFLR----DVAEKGMVEGMSQR 227
>gi|242093736|ref|XP_002437358.1| hypothetical protein SORBIDRAFT_10g025500 [Sorghum bicolor]
gi|241915581|gb|EER88725.1| hypothetical protein SORBIDRAFT_10g025500 [Sorghum bicolor]
Length = 581
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 102/162 (62%), Gaps = 22/162 (13%)
Query: 113 KGITHGACDYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMS 172
K I HGAC Y++KPVR E +KNIW HV+R+ K +++ N S++G
Sbjct: 6 KAIQHGACHYMVKPVRPEMVKNIWLHVVRKSKSNIRNKVNNRNDNPSQIG--------QP 57
Query: 173 TGNSDQNGKSNRK-----RKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVG 227
+ + K RK RKD DG E ++E +TQKK RV WT +LH KF+
Sbjct: 58 VDDEKDDAKHTRKHCKKNRKDGDGSE---------KDEVISTQKKQRVEWTRQLHSKFLE 108
Query: 228 AVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKR 269
A+N +G+D AVPKKIL++MNV+G+T+ENVASHLQKFR+YLK+
Sbjct: 109 AINHIGMDNAVPKKILEVMNVDGITKENVASHLQKFRMYLKK 150
>gi|255573419|ref|XP_002527635.1| transcription factor, putative [Ricinus communis]
gi|223532940|gb|EEF34706.1| transcription factor, putative [Ricinus communis]
Length = 478
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/297 (32%), Positives = 143/297 (48%), Gaps = 64/297 (21%)
Query: 20 FPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM 79
FP G+RVL +++D + +++ L A Y V++ AL + + +F + I +V
Sbjct: 14 FPKGLRVLLLEEDSISAEEIKSKLEAMDYIVSLFCNENEALSAISDKPESFHVAIVEVST 73
Query: 80 PDMDG-FKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQH 138
+ +G FK LE DLP IM S +MK I GA ++L KP+ E+L+NIWQH
Sbjct: 74 SNSNGNFKFLE---TAKDLPTIMTSNIHCLSTMMKCIALGAVEFLRKPLSEEKLRNIWQH 130
Query: 139 VI-----------------------------------------RRKKVGPKDQNKL---- 153
V+ R + V P +N+
Sbjct: 131 VVHKAFNAGGNVVSDSLKPVNDSGASIPQLKVETEERKNKNLERTENVSPAHENEYEQSP 190
Query: 154 LNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKP 213
L+ + + QGA S G+++ K++R K +KK
Sbjct: 191 LSDKYPAPSTPQLKQGASSDGSAENPNKASRHHKSYG---------------TKVNRKKM 235
Query: 214 RVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKRL 270
+V WTPELH+KFV AV QLGVD+A+P +IL++M VEGLTR NVASHLQKFR++ + +
Sbjct: 236 KVDWTPELHKKFVQAVEQLGVDQAIPSRILEMMKVEGLTRHNVASHLQKFRMHKRHI 292
>gi|374095508|sp|Q9LYP5.3|ARR21_ARATH RecName: Full=Putative two-component response regulator ARR21
Length = 613
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 90/279 (32%), Positives = 143/279 (51%), Gaps = 36/279 (12%)
Query: 22 IGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPD 81
+ + V+ VDDD L ++ L+ +Y V + AL L+ R+N DL+I+D +MP
Sbjct: 14 LKINVMVVDDDHVFLDIMSRMLQHSKYRVIAVDDPKKALSTLKIQRDNIDLIITDYYMPG 73
Query: 82 MDGFKLLEHVGLEM-DLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
M+G +L + + E +LPV+++S+ DT + ++ GA ++ KP+ +L I+Q +
Sbjct: 74 MNGLQLKKQITQEFGNLPVLVMSS--DTNKEEESLSCGAMGFIPKPIHPTDLTKIYQFAL 131
Query: 141 RRKKVG-----------------PK------DQNKLLNQENSRVGAGEGGQGAMSTGN-- 175
K+ G P+ +Q +L + + ST
Sbjct: 132 SNKRNGKSTLSTEQNHKDADVSVPQQITLVPEQADVLKTKRKNCSFKSDSRTVNSTNGSC 191
Query: 176 -SDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGV 234
S + NRKRK G D DG+ S KK ++ WT LH F+ A+ +G+
Sbjct: 192 VSTDGSRKNRKRKPNGGPSD-DGE------SMSQPAKKKKIQWTDSLHDLFLQAIRHIGL 244
Query: 235 DKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKRLSNE 273
DKAVPKKIL M+V LTRENVASHLQK+R++L+R++ +
Sbjct: 245 DKAVPKKILAFMSVPYLTRENVASHLQKYRIFLRRVAEQ 283
>gi|255547920|ref|XP_002515017.1| Two-component response regulator ARR14, putative [Ricinus communis]
gi|223546068|gb|EEF47571.1| Two-component response regulator ARR14, putative [Ricinus communis]
Length = 338
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/225 (37%), Positives = 122/225 (54%), Gaps = 20/225 (8%)
Query: 18 DKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDV 77
D FP G+RV+ VDDDPT L +LE L+ C EVT A L +LRENR +D+VISDV
Sbjct: 11 DAFPAGLRVVVVDDDPTWLSILERMLKRCSCEVTTCCSARDVLALLRENRYGYDIVISDV 70
Query: 78 HMPDMDGFKLLEHVG----LEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELK 133
MP MD F L +G E ++S G+ VM+GI GAC+YLLKP+R++EL+
Sbjct: 71 IMPGMDVFLHLLFIGSMLLTEHLYRFTVISVDGERSRVMRGIQLGACEYLLKPIRMKELR 130
Query: 134 NIWQHVIRRKKVGPKDQNKL---LNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQD 190
NI QHV RRK D + + + + G + G + G + + K ++ +++
Sbjct: 131 NICQHVFRRKIQKEIDIESIEGTIQVQMAINGLDKSNGGHLLCGENLTSVKIGKEVQNKH 190
Query: 191 GDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVD 235
D+ G+ + KK V++ H+KF AVNQ+G D
Sbjct: 191 DDKGPGGN---------FSTKKSAVIF----HQKFDKAVNQIGPD 222
>gi|125552240|gb|EAY97949.1| hypothetical protein OsI_19867 [Oryza sativa Indica Group]
Length = 315
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 72/167 (43%), Positives = 100/167 (59%), Gaps = 20/167 (11%)
Query: 21 PIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMP 80
P+GMRVL +D+ T LK++ L C Y+VT A A++ L EN ++D+V+++VH P
Sbjct: 22 PVGMRVLLIDESTTYLKIITKLLLNCGYKVTPKTAARDAVEELHENPWSYDMVLTEVHAP 81
Query: 81 -DMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
+DGF LL++ G +MDLPV++ SA D + V+K + GACDYL+KP+R EELKNIWQHV
Sbjct: 82 AGIDGFNLLQYAGTDMDLPVVVFSADDDKRTVLKCVNSGACDYLVKPLRHEELKNIWQHV 141
Query: 140 IRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKR 186
RR N R GG+ A + GNS + R R
Sbjct: 142 YRR---------------NLR----SGGRRAAAAGNSSKGEIKKRFR 169
>gi|15240724|ref|NP_196338.1| putative two-component response regulator ARR21 [Arabidopsis
thaliana]
gi|7546699|emb|CAB87277.1| putative protein [Arabidopsis thaliana]
gi|332003739|gb|AED91122.1| putative two-component response regulator ARR21 [Arabidopsis
thaliana]
Length = 621
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 90/287 (31%), Positives = 143/287 (49%), Gaps = 44/287 (15%)
Query: 22 IGMRVLAVDDDPTCLKVLENFLRACQYE--------VTVTNQAVTALKMLRENRNNFDLV 73
+ + V+ VDDD L ++ L+ +Y V + AL L+ R+N DL+
Sbjct: 14 LKINVMVVDDDHVFLDIMSRMLQHSKYRDPSVMEIAVIAVDDPKKALSTLKIQRDNIDLI 73
Query: 74 ISDVHMPDMDGFKLLEHVGLEM-DLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEEL 132
I+D +MP M+G +L + + E +LPV+++S+ DT + ++ GA ++ KP+ +L
Sbjct: 74 ITDYYMPGMNGLQLKKQITQEFGNLPVLVMSS--DTNKEEESLSCGAMGFIPKPIHPTDL 131
Query: 133 KNIWQHVIRRKKVG-----------------PK------DQNKLLNQENSRVGAGEGGQG 169
I+Q + K+ G P+ +Q +L + +
Sbjct: 132 TKIYQFALSNKRNGKSTLSTEQNHKDADVSVPQQITLVPEQADVLKTKRKNCSFKSDSRT 191
Query: 170 AMSTGN---SDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFV 226
ST S + NRKRK G D DG+ S KK ++ WT LH F+
Sbjct: 192 VNSTNGSCVSTDGSRKNRKRKPNGGPSD-DGE------SMSQPAKKKKIQWTDSLHDLFL 244
Query: 227 GAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKRLSNE 273
A+ +G+DKAVPKKIL M+V LTRENVASHLQK+R++L+R++ +
Sbjct: 245 QAIRHIGLDKAVPKKILAFMSVPYLTRENVASHLQKYRIFLRRVAEQ 291
>gi|297806747|ref|XP_002871257.1| hypothetical protein ARALYDRAFT_325337 [Arabidopsis lyrata subsp.
lyrata]
gi|297317094|gb|EFH47516.1| hypothetical protein ARALYDRAFT_325337 [Arabidopsis lyrata subsp.
lyrata]
Length = 625
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/289 (31%), Positives = 143/289 (49%), Gaps = 48/289 (16%)
Query: 22 IGMRVLAVDDDPTCLKVLENFLRACQY--------EVTVTNQAVTALKMLRENRNNFDLV 73
+ + V+ VDDD L +L L +Y V + AL L+ R++ DL+
Sbjct: 14 LRINVMVVDDDRVFLNILSRMLERSKYIDPSVMKITVVAVDDPKKALSTLKIQRDHIDLI 73
Query: 74 ISDVHMPDMDGFKLLEHVGLEM-DLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEEL 132
I+D +MP M+G +L + + E +LPV+++S+ D + ++ GA ++ KP+ +L
Sbjct: 74 ITDYYMPSMNGLQLKKQITQEFGNLPVLVMSS--DPNKEQESLSCGAMGFIPKPIEPADL 131
Query: 133 KNIWQHVIRRKKVG-----------------PK------DQNKLLNQENSRVGAGEGGQG 169
I+Q + K G P+ +Q +L + + +
Sbjct: 132 TKIYQFALTYKMNGKSTLLTEQNHKDANVSVPQQITLIPEQANVLKTKKKNCSSKSDSRT 191
Query: 170 AMSTGNS---DQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQ--KKPRVVWTPELHRK 224
ST S + NRKRK G D DG +S Q KK ++ WT LH
Sbjct: 192 VNSTNGSCVSTDGSRKNRKRKPNGGPSD-----DG----ESLLQPAKKKKITWTDSLHDL 242
Query: 225 FVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKRLSNE 273
F+ A+ +G+DKAVPKKIL MNV LTRENVASHLQK+R++L+R++++
Sbjct: 243 FLQAIRHIGLDKAVPKKILAFMNVSYLTRENVASHLQKYRIFLRRVADQ 291
>gi|356511480|ref|XP_003524454.1| PREDICTED: two-component response regulator-like APRR2-like
[Glycine max]
Length = 480
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/289 (32%), Positives = 143/289 (49%), Gaps = 41/289 (14%)
Query: 20 FPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM 79
FP G++VL ++ D + L A Y V+ + AL + +F + I +V
Sbjct: 14 FPKGLKVLLLERDNISAAEIRAKLEAMDYNVSTFCEENEALSAISSGLESFHIAIVEVSS 73
Query: 80 PD-MDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQH 138
GFK LE+ DLP IM S +MK I GA ++L KP+ ++L+NIWQH
Sbjct: 74 SSGQGGFKFLENAK---DLPTIMTSNNHCLNTMMKCIALGAVEFLRKPLSEDKLRNIWQH 130
Query: 139 VIRR----------KKVGPKDQNKL---------------LNQENSRVGAGEGGQGAMST 173
V+ + + + P ++ + ++++ +V +S+
Sbjct: 131 VVHKAFNARASILSESLKPVKESVVSMLQLQTDDEQHESRVSRDIEKVSRFVDNDHELSS 190
Query: 174 GNSDQNGKSNRK-----RKDQDGDEDED-----GDDDGHEN--EDSTTQKKPRVVWTPEL 221
GN S + R DGD E G + H + E QKK +V WTPEL
Sbjct: 191 GNDKYPAPSTPQLRQGTRLLDDGDCQEQTNCSTGKESVHSDSCEIRGNQKKIKVDWTPEL 250
Query: 222 HRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKRL 270
H+ FV AV QLG+D+A+P +IL+LM VEGLTR NVASHLQK+R++ +++
Sbjct: 251 HKTFVKAVEQLGIDQAIPSRILELMKVEGLTRHNVASHLQKYRMHKRQI 299
>gi|388458730|gb|AFK31231.1| Ehd1, partial [Oryza rufipogon]
Length = 253
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 112/192 (58%), Gaps = 9/192 (4%)
Query: 102 LSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENS-- 159
+++ GDT VMK + +GA D+LLKPVRIEEL NIWQH+ R++ K+ N + N E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 160 --RVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVW 217
+ A A + + + + + + +D + +G E D +K R+ W
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNG-----EITDIRNLRKSRLTW 115
Query: 218 TPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKRLSNETPQA 277
T +LHR+F+ AVN LG DKAVPKKIL +M V+ LTRE VASHLQK+R+ LK+ T +
Sbjct: 116 TTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKKSIPTTSKH 175
Query: 278 GMVAALGSKDSS 289
G+ + + D +
Sbjct: 176 GVTLSSTALDKT 187
>gi|388458740|gb|AFK31236.1| Ehd1, partial [Oryza rufipogon]
Length = 253
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 73/172 (42%), Positives = 104/172 (60%), Gaps = 9/172 (5%)
Query: 102 LSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSR- 160
+++ GDT VMK + +GA D+LLKPVRIEEL NIWQH+ R++ K+ N + N E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPSH 60
Query: 161 ---VGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVW 217
+ A A + + + + + + +D + +G E D +K R+ W
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNG-----EITDIRDLRKSRLTW 115
Query: 218 TPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKR 269
T +LHR+F+ AVN LG DKAVPKKIL +M V+ LTRE VASHLQK+R+ LK+
Sbjct: 116 TTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|218184693|gb|EEC67120.1| hypothetical protein OsI_33927 [Oryza sativa Indica Group]
gi|388458618|gb|AFK31175.1| Ehd1, partial [Oryza sativa Indica Group]
Length = 253
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 77/180 (42%), Positives = 104/180 (57%), Gaps = 7/180 (3%)
Query: 102 LSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRV 161
+++ GDT VMK + +GA D+LLKPVRIEEL NIWQH+ R++ K+ N + N E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEK--- 57
Query: 162 GAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQK---KPRVVWT 218
G + +S E+E DD + N + T + K R+ WT
Sbjct: 58 -PGHPPSTLAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRDLGKSRLTWT 116
Query: 219 PELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKRLSNETPQAG 278
+LHR+F+ AVN LG DKAVPKKIL +M V+ LTRE VASHLQK+R+ LK+ T + G
Sbjct: 117 TQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKKSIPTTSKQG 176
>gi|357458949|ref|XP_003599755.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|357469643|ref|XP_003605106.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|355488803|gb|AES70006.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|355506161|gb|AES87303.1| Two-component response regulator ARR1 [Medicago truncatula]
Length = 247
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 109/205 (53%), Gaps = 38/205 (18%)
Query: 70 FDLVISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRI 129
FD+++ D MP+MD ++HV L++ +P IM++ +MK I GAC+Y KP+
Sbjct: 39 FDVMLIDARMPNMDACDFVQHVSLQLQIPAIMMAVDSTKNSIMKSIECGACEYWTKPLIE 98
Query: 130 EELKNIWQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQ 189
++ K +WQHV R+ G E + A+ + Q +NRKR
Sbjct: 99 KKFKTMWQHVARK-------------------GMPENKEYAIVGSSMVQ---ANRKR--- 133
Query: 190 DGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVE 249
G ED D + H K R W+PELH++F+ AVNQLG+DKA PKKI +M+V
Sbjct: 134 -GREDADASKETHA-------KTARFSWSPELHQRFLWAVNQLGLDKATPKKIQKIMDVP 185
Query: 250 GLTRENVASHLQKFRLYLKRLSNET 274
+T+E+V K+R Y+K + ET
Sbjct: 186 NMTKEHV-----KYRNYIKSSTKET 205
>gi|388458626|gb|AFK31179.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458628|gb|AFK31180.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458634|gb|AFK31183.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458636|gb|AFK31184.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458640|gb|AFK31186.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458662|gb|AFK31197.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458666|gb|AFK31199.1| Ehd1, partial [Oryza sativa Indica Group]
gi|388458684|gb|AFK31208.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458696|gb|AFK31214.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458700|gb|AFK31216.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458702|gb|AFK31217.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458704|gb|AFK31218.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458706|gb|AFK31219.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458756|gb|AFK31244.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458758|gb|AFK31245.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458760|gb|AFK31246.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/191 (40%), Positives = 109/191 (57%), Gaps = 7/191 (3%)
Query: 102 LSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRV 161
+++ GDT VMK + +GA D+LLKPVRIEEL NIWQH+ R++ K+ N + N E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEK--- 57
Query: 162 GAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQK---KPRVVWT 218
G + +S E+E DD + N + T + K R+ WT
Sbjct: 58 -PGHPPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRNLGKSRLTWT 116
Query: 219 PELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKRLSNETPQAG 278
+LHR+F+ AVN LG DKAVPKKIL +M V+ LTRE VASHLQK+R+ LK+ T + G
Sbjct: 117 TQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKKSIPTTSKHG 176
Query: 279 MVAALGSKDSS 289
+ + + D +
Sbjct: 177 VTLSSTALDKT 187
>gi|388458680|gb|AFK31206.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/191 (40%), Positives = 108/191 (56%), Gaps = 7/191 (3%)
Query: 102 LSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRV 161
+++ GDT VMK + +GA D+LLKPVRIEEL NIWQH+ R++ K+ N + N E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEK--- 57
Query: 162 GAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQK---KPRVVWT 218
G + +S E+E DD + N + T + K R+ WT
Sbjct: 58 -PGHPPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRDLGKSRLTWT 116
Query: 219 PELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKRLSNETPQAG 278
+LHR+F+ AVN LG DKAVPKKIL +M V+ LTRE VASHLQK+R+ LK+ T + G
Sbjct: 117 TQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKKSIPTTSKHG 176
Query: 279 MVAALGSKDSS 289
+ + D +
Sbjct: 177 ATLSSAALDKT 187
>gi|388458698|gb|AFK31215.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/191 (40%), Positives = 109/191 (57%), Gaps = 7/191 (3%)
Query: 102 LSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRV 161
+++ GDT VMK + +GA D+LLKPVRIEEL NIWQH+ R++ K+ N + N E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEK--- 57
Query: 162 GAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQK---KPRVVWT 218
G + +S E+E DD + N + T + K R+ WT
Sbjct: 58 -PGHPPSMLAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRNLGKSRLTWT 116
Query: 219 PELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKRLSNETPQAG 278
+LHR+F+ AVN LG DKA+PKKIL +M V+ LTRE VASHLQK+R+ LK+ T + G
Sbjct: 117 TQLHRQFIAAVNHLGEDKAIPKKILGIMKVKHLTREQVASHLQKYRMQLKKSIPTTSKHG 176
Query: 279 MVAALGSKDSS 289
+ + + D +
Sbjct: 177 VTLSSTALDKT 187
>gi|388458622|gb|AFK31177.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/191 (40%), Positives = 109/191 (57%), Gaps = 7/191 (3%)
Query: 102 LSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRV 161
+++ GDT VMK + +GA D+LLKPVRIEEL NIWQH+ R++ K+ N + N E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEK--- 57
Query: 162 GAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQK---KPRVVWT 218
G + +S E+E DD + N + T + K R+ WT
Sbjct: 58 -PGHPPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRNLGKSRLTWT 116
Query: 219 PELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKRLSNETPQAG 278
+LHR+F+ AVN LG DKAVPKKIL +M V+ LTRE VASHLQK+R+ LK+ T + G
Sbjct: 117 TQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKKSIPTTSKHG 176
Query: 279 MVAALGSKDSS 289
+ + + D +
Sbjct: 177 VTLSSTALDKT 187
>gi|388458752|gb|AFK31242.1| Ehd1, partial [Oryza rufipogon]
Length = 253
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/171 (43%), Positives = 101/171 (59%), Gaps = 7/171 (4%)
Query: 102 LSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRV 161
+++ GDT VMK + +GA D+LLKPVRIEEL NIWQH+ R++ K+ N + N E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEK--- 57
Query: 162 GAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQK---KPRVVWT 218
G + +S E+E DD + N + T + K R+ WT
Sbjct: 58 -PGHPPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRNLGKSRLTWT 116
Query: 219 PELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKR 269
+LHR+F+ AVN LG DKAVPKKIL +M V+ LTRE VASHLQK+R+ LK+
Sbjct: 117 TQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|388458710|gb|AFK31221.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/191 (40%), Positives = 109/191 (57%), Gaps = 7/191 (3%)
Query: 102 LSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRV 161
+++ GDT VMK + +GA D+LLKPVRIEEL NIWQH+ R++ K+ N + N E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEK--- 57
Query: 162 GAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQK---KPRVVWT 218
G + +S E+E DD + N + T + K R+ WT
Sbjct: 58 -PGHPPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRNLGKSRLTWT 116
Query: 219 PELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKRLSNETPQAG 278
+LHR+F+ AVN LG DKAVPKKIL +M V+ LTRE VASHLQK+R+ LK+ T + G
Sbjct: 117 TQLHRQFIAAVNHLGGDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKKSIPTTSKHG 176
Query: 279 MVAALGSKDSS 289
+ + + D +
Sbjct: 177 VTLSSTALDKT 187
>gi|388458688|gb|AFK31210.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/171 (43%), Positives = 101/171 (59%), Gaps = 7/171 (4%)
Query: 102 LSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRV 161
+++ GDT VMK + +GA D+LLKPVRIEEL NIWQH+ R++ K+ N + N E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEK--- 57
Query: 162 GAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQK---KPRVVWT 218
G + +S E+E DD + N + T + K R+ WT
Sbjct: 58 -PGHPPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRNLGKSRLTWT 116
Query: 219 PELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKR 269
+LHR+F+ AVN LG DKAVPKKIL +M V+ LTRE VASHLQK+R+ LK+
Sbjct: 117 TQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|388458732|gb|AFK31232.1| Ehd1, partial [Oryza rufipogon]
Length = 253
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/171 (43%), Positives = 101/171 (59%), Gaps = 7/171 (4%)
Query: 102 LSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRV 161
+++ GDT VMK + +GA D+LLKPVRIEEL NIWQH+ R++ K+ N + N E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEK--- 57
Query: 162 GAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQK---KPRVVWT 218
G + +S E+E DD + N + T + K R+ WT
Sbjct: 58 -PGHPPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRNLGKSRLTWT 116
Query: 219 PELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKR 269
+LHR+F+ AVN LG DKAVPKKIL +M V+ LTRE VASHLQK+R+ LK+
Sbjct: 117 TQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|388458612|gb|AFK31172.1| Ehd1, partial [Oryza sativa Indica Group]
gi|388458614|gb|AFK31173.1| Ehd1, partial [Oryza sativa Indica Group]
gi|388458654|gb|AFK31193.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458660|gb|AFK31196.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458668|gb|AFK31200.1| Ehd1, partial [Oryza sativa Indica Group]
gi|388458670|gb|AFK31201.1| Ehd1, partial [Oryza sativa Indica Group]
gi|388458676|gb|AFK31204.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458678|gb|AFK31205.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458682|gb|AFK31207.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458690|gb|AFK31211.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458726|gb|AFK31229.1| Ehd1, partial [Oryza rufipogon]
gi|388458746|gb|AFK31239.1| Ehd1, partial [Oryza rufipogon]
Length = 253
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/171 (43%), Positives = 101/171 (59%), Gaps = 7/171 (4%)
Query: 102 LSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRV 161
+++ GDT VMK + +GA D+LLKPVRIEEL NIWQH+ R++ K+ N + N E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEK--- 57
Query: 162 GAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQK---KPRVVWT 218
G + +S E+E DD + N + T + K R+ WT
Sbjct: 58 -PGHPPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRDLGKSRLTWT 116
Query: 219 PELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKR 269
+LHR+F+ AVN LG DKAVPKKIL +M V+ LTRE VASHLQK+R+ LK+
Sbjct: 117 TQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|388458754|gb|AFK31243.1| Ehd1, partial [Oryza rufipogon]
Length = 253
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/171 (43%), Positives = 101/171 (59%), Gaps = 7/171 (4%)
Query: 102 LSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRV 161
+++ GDT VMK + +GA D+LLKPVRIEEL NIWQH+ R++ K+ N + N E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEK--- 57
Query: 162 GAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQK---KPRVVWT 218
G + +S E+E DD + N + T + K R+ WT
Sbjct: 58 -PGHPPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRNLGKSRLTWT 116
Query: 219 PELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKR 269
+LHR+F+ AVN LG DKAVPKKIL +M V+ LTRE VASHLQK+R+ LK+
Sbjct: 117 TQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|388458692|gb|AFK31212.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/191 (40%), Positives = 109/191 (57%), Gaps = 7/191 (3%)
Query: 102 LSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRV 161
+++ GDT VMK + +GA D+LLKPVRIEEL NIWQH+ R++ K+ N + N E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEK--- 57
Query: 162 GAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQK---KPRVVWT 218
G + +S E+E DD + N + T + K R+ WT
Sbjct: 58 -PGHPPSILAMARATPATTRSTAIEASLAPLENEVRDDMVNYNGEITDIRNLGKSRLTWT 116
Query: 219 PELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKRLSNETPQAG 278
+LHR+F+ AVN LG DKAVPKKIL +M V+ LTRE VASHLQK+R+ LK+ T + G
Sbjct: 117 TQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKKSIPTTSKHG 176
Query: 279 MVAALGSKDSS 289
+ + + D +
Sbjct: 177 VTLSSTALDKT 187
>gi|388458694|gb|AFK31213.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/191 (40%), Positives = 108/191 (56%), Gaps = 7/191 (3%)
Query: 102 LSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRV 161
+++ GDT VMK + +GA D+LLKPVRIEEL NIWQH+ R++ K+ N + N E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEK--- 57
Query: 162 GAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQK---KPRVVWT 218
G + +S E+E DD + N T + K R+ WT
Sbjct: 58 -PGHPPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGQITDIRNLGKSRLTWT 116
Query: 219 PELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKRLSNETPQAG 278
+LHR+F+ AVN LG DKAVPKKIL +M V+ LTRE VASHLQK+R+ LK+ T + G
Sbjct: 117 TQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKKSIPTTSKHG 176
Query: 279 MVAALGSKDSS 289
+ + + D +
Sbjct: 177 VTLSSTALDKT 187
>gi|388458632|gb|AFK31182.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/171 (43%), Positives = 101/171 (59%), Gaps = 7/171 (4%)
Query: 102 LSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRV 161
+++ GDT VMK + +GA D+LLKPVRIEEL NIWQH+ R++ K+ N + N E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEK--- 57
Query: 162 GAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQK---KPRVVWT 218
G + +S E+E DD + N + T + K R+ WT
Sbjct: 58 -PGHPPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRNLGKSRLTWT 116
Query: 219 PELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKR 269
+LHR+F+ AVN LG DKAVPKKIL +M V+ LTRE VASHLQK+R+ LK+
Sbjct: 117 TQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|50400707|sp|Q9ZVD3.2|ARR13_ARATH RecName: Full=Putative two-component response regulator ARR13
Length = 572
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/279 (32%), Positives = 142/279 (50%), Gaps = 39/279 (13%)
Query: 22 IGMRVLAVDDDPTCLKVLENFLRACQY-EVTV--TNQAVTALKMLRENRNNFDLVISDVH 78
+ + V+ VDD+ L + L +Y E+TV + AL L+ R+N DL+I+D +
Sbjct: 14 LKINVMVVDDNRVFLDIWSRMLEKSKYREITVIAVDYPKKALSTLKNQRDNIDLIITDYY 73
Query: 79 MPDMDGFKLLEHVGLEM-DLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQ 137
MP M+G +L + + E +L V+++S+ D + ++ GA ++ KP+ +L I+Q
Sbjct: 74 MPGMNGLQLKKQITQEFGNLSVLVMSS--DPNKEEESLSCGAMGFIPKPIAPTDLPKIYQ 131
Query: 138 HVIRRKKVGPKDQNKLLNQENSRVGAGE-------------------GGQGAMSTGNS-- 176
+ K+ G + NQ+++ V + + T NS
Sbjct: 132 FALTYKRNGKSTLSTEQNQKDANVSVPQQIMLVPEQAYVLKTKKKNCSSKSDTRTVNSTN 191
Query: 177 ----DQNG-KSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQ 231
NG + NRKRK + G D DG+ S KK ++ WT L F+ A+
Sbjct: 192 VSHVSTNGSRKNRKRKPKGGPSD-DGE------SLSQPPKKKKIWWTNPLQDLFLQAIQH 244
Query: 232 LGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKRL 270
+G DK VPKKIL +MNV LTRENVASHLQK+RL++KR+
Sbjct: 245 IGYDKVVPKKILAIMNVPYLTRENVASHLQKYRLFVKRV 283
>gi|15225844|ref|NP_180275.1| putative two-component response regulator ARR13 [Arabidopsis
thaliana]
gi|3885337|gb|AAC77865.1| putative two-component response regulator protein [Arabidopsis
thaliana]
gi|330252838|gb|AEC07932.1| putative two-component response regulator ARR13 [Arabidopsis
thaliana]
Length = 575
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/279 (32%), Positives = 142/279 (50%), Gaps = 39/279 (13%)
Query: 22 IGMRVLAVDDDPTCLKVLENFLRACQY-EVTV--TNQAVTALKMLRENRNNFDLVISDVH 78
+ + V+ VDD+ L + L +Y E+TV + AL L+ R+N DL+I+D +
Sbjct: 14 LKINVMVVDDNRVFLDIWSRMLEKSKYREITVIAVDYPKKALSTLKNQRDNIDLIITDYY 73
Query: 79 MPDMDGFKLLEHVGLEM-DLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQ 137
MP M+G +L + + E +L V+++S+ D + ++ GA ++ KP+ +L I+Q
Sbjct: 74 MPGMNGLQLKKQITQEFGNLSVLVMSS--DPNKEEESLSCGAMGFIPKPIAPTDLPKIYQ 131
Query: 138 HVIRRKKVGPKDQNKLLNQENSRVGAGE-------------------GGQGAMSTGNS-- 176
+ K+ G + NQ+++ V + + T NS
Sbjct: 132 FALTYKRNGKSTLSTEQNQKDANVSVPQQIMLVPEQAYVLKTKKKNCSSKSDTRTVNSTN 191
Query: 177 ----DQNG-KSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQ 231
NG + NRKRK + G D DG+ S KK ++ WT L F+ A+
Sbjct: 192 VSHVSTNGSRKNRKRKPKGGPSD-DGES------LSQPPKKKKIWWTNPLQDLFLQAIQH 244
Query: 232 LGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKRL 270
+G DK VPKKIL +MNV LTRENVASHLQK+RL++KR+
Sbjct: 245 IGYDKVVPKKILAIMNVPYLTRENVASHLQKYRLFVKRV 283
>gi|22758332|gb|AAN05536.1| putative response regulator protein [Oryza sativa Japonica Group]
gi|222612965|gb|EEE51097.1| hypothetical protein OsJ_31808 [Oryza sativa Japonica Group]
gi|388458638|gb|AFK31185.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458708|gb|AFK31220.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458724|gb|AFK31228.1| Ehd1, partial [Oryza rufipogon]
gi|388458728|gb|AFK31230.1| Ehd1, partial [Oryza rufipogon]
gi|388458736|gb|AFK31234.1| Ehd1, partial [Oryza rufipogon]
gi|388458750|gb|AFK31241.1| Ehd1, partial [Oryza rufipogon]
Length = 253
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/171 (43%), Positives = 101/171 (59%), Gaps = 7/171 (4%)
Query: 102 LSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRV 161
+++ GDT VMK + +GA D+LLKPVRIEEL NIWQH+ R++ K+ N + N E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEK--- 57
Query: 162 GAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQK---KPRVVWT 218
G + +S E+E DD + N + T + K R+ WT
Sbjct: 58 -PGHPPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRDLGKSRLTWT 116
Query: 219 PELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKR 269
+LHR+F+ AVN LG DKAVPKKIL +M V+ LTRE VASHLQK+R+ LK+
Sbjct: 117 TQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|388458722|gb|AFK31227.1| Ehd1, partial [Oryza officinalis]
gi|388458744|gb|AFK31238.1| Ehd1, partial [Oryza rufipogon]
Length = 253
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/172 (42%), Positives = 103/172 (59%), Gaps = 9/172 (5%)
Query: 102 LSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENS-- 159
+++ GDT VMK + +GA D+LLKPVRIEEL NIWQH+ R++ K+ N + N E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 160 --RVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVW 217
+ A A + + + + + + +D + +G E D K R+ W
Sbjct: 61 PPSILAMARATPATTISTATEASLAPLENEVRDDMVNYNG-----EITDIRDLGKSRLTW 115
Query: 218 TPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKR 269
T +LHR+F+ AVN LG DKAVPKKIL +M V+ LTRE VASHLQK+R+ LK+
Sbjct: 116 TTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|388458748|gb|AFK31240.1| Ehd1, partial [Oryza rufipogon]
Length = 253
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/171 (43%), Positives = 101/171 (59%), Gaps = 7/171 (4%)
Query: 102 LSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRV 161
+++ GDT VMK + +GA D+LLKPVRIEEL NIWQH+ R++ K+ N + N E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEK--- 57
Query: 162 GAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQK---KPRVVWT 218
G + +S E+E DD + N + T + K R+ WT
Sbjct: 58 -PGHPPSILSMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRDLGKSRLTWT 116
Query: 219 PELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKR 269
+LHR+F+ AVN LG DKAVPKKIL +M V+ LTRE VASHLQK+R+ LK+
Sbjct: 117 TQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|388458674|gb|AFK31203.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458712|gb|AFK31222.1| Ehd1, partial [Oryza nivara]
gi|388458718|gb|AFK31225.1| Ehd1, partial [Oryza nivara]
Length = 253
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/172 (42%), Positives = 103/172 (59%), Gaps = 9/172 (5%)
Query: 102 LSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENS-- 159
+++ GDT VMK + +GA D+LLKPVRIEEL NIWQH+ R++ K+ N + N E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 160 --RVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVW 217
+ A A + + + + + + +D + +G E D K R+ W
Sbjct: 61 PPSILAMARATPATTISTATEASLAPLENEVRDDMVNYNG-----EITDIRDLGKSRLTW 115
Query: 218 TPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKR 269
T +LHR+F+ AVN LG DKAVPKKIL +M V+ LTRE VASHLQK+R+ LK+
Sbjct: 116 TTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|388458610|gb|AFK31171.1| Ehd1, partial [Oryza sativa Indica Group]
Length = 253
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/180 (42%), Positives = 105/180 (58%), Gaps = 7/180 (3%)
Query: 102 LSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRV 161
+++ GDT VMK + +GA D+LLKPVRIEEL NIWQH+ R++ K+ N + N E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEK--- 57
Query: 162 GAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQK---KPRVVWT 218
G + + +S E+E DD + N + T + K R+ WT
Sbjct: 58 -PGHPPSILATARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRDLGKSRLTWT 116
Query: 219 PELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKRLSNETPQAG 278
+LHR+F+ AVN LG DKAVPKKIL +M V+ LTRE VASHLQK+R+ LK+ T + G
Sbjct: 117 AQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKKSIPTTSKHG 176
>gi|388458630|gb|AFK31181.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/191 (40%), Positives = 108/191 (56%), Gaps = 7/191 (3%)
Query: 102 LSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRV 161
+++ GDT VMK + +GA D+LLKPVRIEEL NIWQH+ R++ K+ N + N E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEK--- 57
Query: 162 GAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQK---KPRVVWT 218
G + +S E+E DD + N + T + K R+ WT
Sbjct: 58 -PGHPPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRNLGKSRLTWT 116
Query: 219 PELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKRLSNETPQAG 278
+LHR+F+ AVN L DKAVPKKIL +M V+ LTRE VASHLQK+R+ LK+ T + G
Sbjct: 117 TQLHRQFIAAVNHLAEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKKSIPTTSKHG 176
Query: 279 MVAALGSKDSS 289
+ + + D +
Sbjct: 177 VTLSSTALDKT 187
>gi|388458720|gb|AFK31226.1| Ehd1, partial [Oryza nivara]
Length = 253
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/172 (42%), Positives = 103/172 (59%), Gaps = 9/172 (5%)
Query: 102 LSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENS-- 159
+++ GDT VMK + +GA D+LLKPVRIEEL NIWQH+ R++ K+ N + N E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 160 --RVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVW 217
+ A A + + + + + + +D + +G E D K R+ W
Sbjct: 61 PPSILAMARATPATTISTATEASLAPLENEVRDDMVNYNG-----EIMDIRDLGKSRLTW 115
Query: 218 TPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKR 269
T +LHR+F+ AVN LG DKAVPKKIL +M V+ LTRE VASHLQK+R+ LK+
Sbjct: 116 TTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|388458672|gb|AFK31202.1| Ehd1, partial [Oryza sativa Indica Group]
Length = 253
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/171 (43%), Positives = 100/171 (58%), Gaps = 7/171 (4%)
Query: 102 LSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRV 161
+++ GDT VMK + +GA D+LLKPVRIEEL NIWQH+ R + K+ N + N E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRTQMQDHKNNNMVGNLEK--- 57
Query: 162 GAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQK---KPRVVWT 218
G + +S E+E DD + N + T + K R+ WT
Sbjct: 58 -PGHPPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRDLGKSRLTWT 116
Query: 219 PELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKR 269
+LHR+F+ AVN LG DKAVPKKIL +M V+ LTRE VASHLQK+R+ LK+
Sbjct: 117 TQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|388458658|gb|AFK31195.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/171 (43%), Positives = 100/171 (58%), Gaps = 7/171 (4%)
Query: 102 LSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRV 161
+++ GDT VMK + +GA D+LLKPVRIEEL NIWQH+ R + K+ N + N E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFREQMQDHKNNNMVGNLEK--- 57
Query: 162 GAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQK---KPRVVWT 218
G + +S E+E DD + N + T + K R+ WT
Sbjct: 58 -PGHPPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRNLGKSRLTWT 116
Query: 219 PELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKR 269
+LHR+F+ AVN LG DKAVPKKIL +M V+ LTRE VASHLQK+R+ LK+
Sbjct: 117 TQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|388458738|gb|AFK31235.1| Ehd1, partial [Oryza rufipogon]
Length = 253
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/171 (43%), Positives = 101/171 (59%), Gaps = 7/171 (4%)
Query: 102 LSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRV 161
+++ GDT VMK + +GA D+LLKPVRIEEL NIWQH+ R++ ++ N + N E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHENNNMVGNLEK--- 57
Query: 162 GAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQK---KPRVVWT 218
G + +S E+E DD + N + T + K R+ WT
Sbjct: 58 -PGHPPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRNLGKSRLTWT 116
Query: 219 PELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKR 269
+LHR+F+ AVN LG DKAVPKKIL +M V+ LTRE VASHLQK+R+ LK+
Sbjct: 117 TQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|414865597|tpg|DAA44154.1| TPA: putative two-component response regulator family protein [Zea
mays]
Length = 114
Score = 129 bits (325), Expect = 4e-27, Method: Composition-based stats.
Identities = 58/81 (71%), Positives = 66/81 (81%)
Query: 20 FPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM 79
FP+GM+VL VDDDPTCL VL+ L C+Y+VT QA AL MLRENR FD++ISDVHM
Sbjct: 11 FPVGMKVLVVDDDPTCLVVLKRMLLECRYDVTTCPQATRALTMLRENRRGFDVIISDVHM 70
Query: 80 PDMDGFKLLEHVGLEMDLPVI 100
PDMDGF+LLE VGLEMDLPVI
Sbjct: 71 PDMDGFRLLELVGLEMDLPVI 91
>gi|388458742|gb|AFK31237.1| Ehd1, partial [Oryza rufipogon]
Length = 253
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 73/172 (42%), Positives = 103/172 (59%), Gaps = 9/172 (5%)
Query: 102 LSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENS-- 159
+++ GDT VMK + +GA D+LLKPVRIEEL NIWQH+ R++ K+ N + N E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 160 --RVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVW 217
+ A A + + + + + + +D + +G E D K R+ W
Sbjct: 61 PPSILAMARATPATTISTATEASLAPLENEVRDDMVNYNG-----EITDIRDLGKSRLTW 115
Query: 218 TPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKR 269
T +LHR+F+ AVN LG DKAVPKKIL +M V+ LTRE VASHLQK+R+ LK+
Sbjct: 116 TTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRVQLKK 167
>gi|388458608|gb|AFK31170.1| Ehd1, partial [Oryza sativa Indica Group]
Length = 253
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 74/171 (43%), Positives = 101/171 (59%), Gaps = 7/171 (4%)
Query: 102 LSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRV 161
+++ GDT VMK + +GA D+LLKPVRIEEL NIWQH+ R++ K+ + + N E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNSMVGNLEK--- 57
Query: 162 GAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQK---KPRVVWT 218
G + +S E+E DD + N + T + K R+ WT
Sbjct: 58 -PGHPPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRDLGKSRLTWT 116
Query: 219 PELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKR 269
+LHR+F+ AVN LG DKAVPKKIL +M V+ LTRE VASHLQK+R+ LK+
Sbjct: 117 TQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|388458656|gb|AFK31194.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 74/171 (43%), Positives = 101/171 (59%), Gaps = 7/171 (4%)
Query: 102 LSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRV 161
+++ GDT VMK + +GA D+LLKPVRIEEL NIWQH+ +++ K+ N + N E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFQKQMQDHKNNNMVGNLEK--- 57
Query: 162 GAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQK---KPRVVWT 218
G + +S E+E DD + N + T + K R+ WT
Sbjct: 58 -PGHPPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRDLGKSRLTWT 116
Query: 219 PELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKR 269
+LHR+F+ AVN LG DKAVPKKIL +M V+ LTRE VASHLQK+R+ LK+
Sbjct: 117 TQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|388458716|gb|AFK31224.1| Ehd1, partial [Oryza nivara]
Length = 253
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 72/172 (41%), Positives = 104/172 (60%), Gaps = 9/172 (5%)
Query: 102 LSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENS-- 159
+++ GDT VMK + +GA D+LLKPVRIEEL NIWQH+ R++ K+ N + N E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 160 --RVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVW 217
+ A A + + + + + + +D + +G E D K R+ W
Sbjct: 61 PPSILAMARATPATTISTATEASLAPLENEVRDDMVNYNG-----EITDIRDLGKSRLTW 115
Query: 218 TPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKR 269
T +LHR+F+ AVN+LG DKAVPKK+L +M V+ LTRE VASHLQK+R+ LK+
Sbjct: 116 TTQLHRQFIAAVNRLGEDKAVPKKMLGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|449458817|ref|XP_004147143.1| PREDICTED: uncharacterized protein LOC101203501 [Cucumis sativus]
Length = 607
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 101/324 (31%), Positives = 146/324 (45%), Gaps = 74/324 (22%)
Query: 20 FPIGMRVLAVDDDPTCLKVLENFLRACQY-----EVTVTNQAVTALKMLRENRNNFDLVI 74
F + VL VD DP LK L + L Y +T T A AL M++E + FDLV+
Sbjct: 15 FAKNLHVLLVDHDPFSLKHLASLLEQQSYNGTVDHITTTQLASIALSMIQEKGDRFDLVM 74
Query: 75 SDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKN 134
++V MPDMD F L HV L+M++ VI +S+ + + K + GAC +L KP+ +LK
Sbjct: 75 ANVSMPDMDSFSFL-HVLLKMNIAVIFMSSGMNLSVATKALAEGACYFLQKPISRGDLKY 133
Query: 135 IWQHVI---------------------RRKKVG--------------------------- 146
+WQHV R++ VG
Sbjct: 134 MWQHVYRWNRNITKQTYKANCIETAKPRKESVGIQITDAVVLSRSAAAVSYNNNCCINYK 193
Query: 147 -----PKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDG---D 198
KD++ + +S VG+ GG+ + D G S KR + + G
Sbjct: 194 PMENKEKDKSVQIGSHDSLVGSFFGGKRL----SDDIEGISREKRVKYYSEPTKFGFSRI 249
Query: 199 DDGHENEDS---TTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTREN 255
D+ HE + + RVVW E RKF A+N+LG DK+ PK IL +MN LT
Sbjct: 250 DEDHERRKEYYIASDSRTRVVWNAERRRKFTDALNKLG-DKSRPKLILKMMNEPCLTLRQ 308
Query: 256 VASHLQKFR----LYLKRLSNETP 275
VA+HLQK++ + +R N+ P
Sbjct: 309 VANHLQKYKAQVECFKRRRENKLP 332
>gi|388458734|gb|AFK31233.1| Ehd1, partial [Oryza rufipogon]
Length = 253
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 74/171 (43%), Positives = 101/171 (59%), Gaps = 7/171 (4%)
Query: 102 LSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRV 161
+++ GDT VMK + +GA D+LLKPVRIEEL NIWQH+ R++ K+ N + N E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEK--- 57
Query: 162 GAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQK---KPRVVWT 218
G + +S E+E DD + N + T + K R+ WT
Sbjct: 58 -PGHPPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRDLGKSRLTWT 116
Query: 219 PELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKR 269
+LHR+F+ AVN LG DKAVPKKIL ++ V+ LTRE VASHLQK+R+ LK+
Sbjct: 117 TQLHRQFIAAVNHLGEDKAVPKKILGIIKVKHLTREQVASHLQKYRMQLKK 167
>gi|388458686|gb|AFK31209.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 77/191 (40%), Positives = 108/191 (56%), Gaps = 7/191 (3%)
Query: 102 LSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRV 161
+++ GDT VMK + +GA D+LLKPVRIEE NIWQH+ R++ K+ N + N E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEEPSNIWQHIFRKQMQDHKNNNMVGNLEK--- 57
Query: 162 GAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQK---KPRVVWT 218
G + +S E+E DD + N + T + K R+ WT
Sbjct: 58 -PGHPPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRNLGKSRLTWT 116
Query: 219 PELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKRLSNETPQAG 278
+LHR+F+ AVN LG DKAVPKKIL +M V+ LTRE VASHLQK+R+ LK+ T + G
Sbjct: 117 TQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKKSIPTTSKHG 176
Query: 279 MVAALGSKDSS 289
+ + + D +
Sbjct: 177 VTLSSTALDKT 187
>gi|449503419|ref|XP_004161993.1| PREDICTED: uncharacterized protein LOC101230585 [Cucumis sativus]
Length = 557
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 101/324 (31%), Positives = 146/324 (45%), Gaps = 74/324 (22%)
Query: 20 FPIGMRVLAVDDDPTCLKVLENFLRACQY-----EVTVTNQAVTALKMLRENRNNFDLVI 74
F + VL VD DP LK L + L Y +T T A AL M++E + FDLV+
Sbjct: 15 FAKNLHVLLVDHDPFSLKHLASLLEQQSYNGTVDHITTTQLASIALSMIQEKGDRFDLVM 74
Query: 75 SDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKN 134
++V MPDMD F L HV L+M++ VI +S+ + + K + GAC +L KP+ +LK
Sbjct: 75 ANVSMPDMDSFSFL-HVLLKMNIAVIFMSSGMNLSVATKALAEGACYFLQKPISRGDLKY 133
Query: 135 IWQHVI---------------------RRKKVG--------------------------- 146
+WQHV R++ VG
Sbjct: 134 MWQHVYRWNRNITKQTYKANCIETAKPRKESVGIQITDAVVLSRSAAAVSYNNNCCINYK 193
Query: 147 -----PKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDG---D 198
KD++ + +S VG+ GG+ + D G S KR + + G
Sbjct: 194 PMENKEKDKSVQIGSHDSLVGSFFGGKRL----SDDIEGISREKRVKYYSEPTKFGFSRI 249
Query: 199 DDGHENEDS---TTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTREN 255
D+ HE + + RVVW E RKF A+N+LG DK+ PK IL +MN LT
Sbjct: 250 DEDHERRKEYYIASDSRTRVVWNAERRRKFTDALNKLG-DKSRPKLILKMMNEPCLTLRQ 308
Query: 256 VASHLQKFR----LYLKRLSNETP 275
VA+HLQK++ + +R N+ P
Sbjct: 309 VANHLQKYKAQVECFKRRRENKLP 332
>gi|388458714|gb|AFK31223.1| Ehd1, partial [Oryza nivara]
Length = 253
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 72/172 (41%), Positives = 102/172 (59%), Gaps = 9/172 (5%)
Query: 102 LSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENS-- 159
+++ GDT VMK + +GA D+LLKPVRIEEL NIWQH+ R++ K+ N + N E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 160 --RVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVW 217
+ A A + + + + + + +D + +G E D K R+ W
Sbjct: 61 PPSILAMARATPATTISTATEASLAPLENEVRDDMVNYNG-----EITDIRDLGKSRLTW 115
Query: 218 TPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKR 269
T +LHR+F+ AVN LG DKAVPKKIL +M + LTRE VASHLQK+R+ LK+
Sbjct: 116 TTQLHRQFIAAVNHLGEDKAVPKKILGIMKAKHLTREQVASHLQKYRMQLKK 167
>gi|357488511|ref|XP_003614543.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|355515878|gb|AES97501.1| Two-component response regulator ARR1 [Medicago truncatula]
Length = 304
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/254 (34%), Positives = 126/254 (49%), Gaps = 61/254 (24%)
Query: 20 FPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM 79
FP G+ V+A+D D T L +E C Y+VT N A AL +L E ++ FD+++ D HM
Sbjct: 10 FPDGLNVIAIDHDTTFLNTIEEMCNRCHYQVTKCNTASEALNLL-ERKDCFDVMLIDAHM 68
Query: 80 PDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
P+MD + ++H ++++PVI S V K IT+GAC+Y KP+ E+ K +WQHV
Sbjct: 69 PNMDAYDFVQHATGQLNIPVISNS-------VTKSITYGACEYWTKPLYEEQFKIMWQHV 121
Query: 140 IRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDD 199
R+ G E + S G+ D G R+R DD
Sbjct: 122 ARK-------------------GLRENKKHK-SVGSLDVQGHRKRER-----------DD 150
Query: 200 DGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASH 259
D N KKPR++ +F KA PK IL +++ GL+ +VASH
Sbjct: 151 DNVPN-----VKKPRLM-------QF----------KAKPKVILKRIDIHGLSAGHVASH 188
Query: 260 LQKFRLYLKRLSNE 273
LQK+R YLKR +E
Sbjct: 189 LQKYRNYLKRSIDE 202
>gi|48210044|gb|AAT40543.1| Putative two-component response regulator protein, identical
[Solanum demissum]
Length = 352
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 125/249 (50%), Gaps = 47/249 (18%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+ +L V+DD T L V+ L+ C Y+V + AL LR ++FDLV++DVH D++
Sbjct: 15 ISILVVNDDATYLPVVAGLLKKCNYQVVTVKYPIDALSKLRIKGDSFDLVVTDVHKSDIN 74
Query: 84 GFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRK 143
GF+L + + ++PV+++SA ++KG LK V +++
Sbjct: 75 GFELQQVITQAFEIPVLLMSADDKEGTILKG---------LKGVSVDD------------ 113
Query: 144 KVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHE 203
+DQ + R G+ AM G + GK N
Sbjct: 114 ---QRDQGPCTALQVKRGKKPVPGKSAMKLG---KQGKDN-------------------- 147
Query: 204 NEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKF 263
+ + K +++WT LH F+ A++ +G DKAVPKKI + M V GL+RENVASH QK+
Sbjct: 148 SVNFVLPTKSQIIWTDSLHNTFLEAISNIGFDKAVPKKIHEHMKVPGLSRENVASHWQKY 207
Query: 264 RLYLKRLSN 272
R+YL+R+++
Sbjct: 208 RIYLRRVTD 216
>gi|388458664|gb|AFK31198.1| Ehd1, partial [Oryza sativa Indica Group]
Length = 253
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/171 (43%), Positives = 100/171 (58%), Gaps = 7/171 (4%)
Query: 102 LSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRV 161
+++ GDT VMK + +GA D+LLKPVRIE L NIWQH+ R++ K+ N + N E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEGLSNIWQHIFRKQMQDHKNNNMVGNLEK--- 57
Query: 162 GAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQK---KPRVVWT 218
G + +S E+E DD + N + T + K R+ WT
Sbjct: 58 -PGHPPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRDLGKSRLTWT 116
Query: 219 PELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKR 269
+LHR+F+ AVN LG DKAVPKKIL +M V+ LTRE VASHLQK+R+ LK+
Sbjct: 117 TQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|388458644|gb|AFK31188.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/171 (43%), Positives = 100/171 (58%), Gaps = 7/171 (4%)
Query: 102 LSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRV 161
+++ GDT VMK + +GA D+LLKPVRIEEL NIWQH+ R++ K+ N + N E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEK--- 57
Query: 162 GAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQK---KPRVVWT 218
G + +S E+E DD + N + T + K R+ WT
Sbjct: 58 -PGHPPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRDLGKSRLTWT 116
Query: 219 PELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKR 269
+LHR+F+ AVN L DKAVPKKIL +M V+ LTRE VASHLQK+R+ LK+
Sbjct: 117 TQLHRQFIAAVNHLREDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|388458620|gb|AFK31176.1| Ehd1, partial [Oryza sativa Indica Group]
Length = 253
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/171 (42%), Positives = 100/171 (58%), Gaps = 7/171 (4%)
Query: 102 LSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRV 161
+++ GDT VMK + +GA D+LLKPVRIEEL NIWQH+ R++ K+ N + N E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEK--- 57
Query: 162 GAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQK---KPRVVWT 218
G + +S E+E DD + N + T + K R+ WT
Sbjct: 58 -PGHPPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRDLGKSRLTWT 116
Query: 219 PELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKR 269
+LHR+F+ AVN LG DKA PKK+L +M V+ LTRE VASHLQK+R+ LK+
Sbjct: 117 TQLHRQFIAAVNHLGEDKAAPKKMLGVMKVKHLTREQVASHLQKYRMQLKK 167
>gi|388458642|gb|AFK31187.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458646|gb|AFK31189.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458648|gb|AFK31190.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458650|gb|AFK31191.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458652|gb|AFK31192.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/171 (43%), Positives = 100/171 (58%), Gaps = 7/171 (4%)
Query: 102 LSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRV 161
+++ GDT VMK + +GA D+LLKPVRIEEL NIWQH+ R++ K+ N + N E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEK--- 57
Query: 162 GAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQK---KPRVVWT 218
G + +S E+E DD + N + T + K R+ WT
Sbjct: 58 -PGHPPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRDLGKSRLTWT 116
Query: 219 PELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKR 269
+LHR+F+ AVN L DKAVPKKIL +M V+ LTRE VASHLQK+R+ LK+
Sbjct: 117 TQLHRQFIAAVNHLREDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|388458616|gb|AFK31174.1| Ehd1, partial [Oryza sativa Indica Group]
Length = 253
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/171 (43%), Positives = 100/171 (58%), Gaps = 7/171 (4%)
Query: 102 LSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRV 161
+++ GDT VMK + +GA D+LLKPV IEEL NIWQH+ R++ K+ N + N E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVGIEELSNIWQHIFRKQMQDHKNNNMVGNLEK--- 57
Query: 162 GAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQK---KPRVVWT 218
G + +S E+E DD + N + T + K R+ WT
Sbjct: 58 -PGHPPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRDLGKSRLTWT 116
Query: 219 PELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKR 269
+LHR+F+ AVN LG DKAVPKKIL +M V+ LTRE VASHLQK+R+ LK+
Sbjct: 117 TQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 167
>gi|388458624|gb|AFK31178.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 77/191 (40%), Positives = 108/191 (56%), Gaps = 7/191 (3%)
Query: 102 LSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRV 161
+++ GDT VMK + +GA D+LLKPVRIEEL NI QH+ R++ K+ N + N E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIRQHIFRKQMQDHKNNNMVGNLEK--- 57
Query: 162 GAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQK---KPRVVWT 218
G + +S E+E DD + N + T + K R+ WT
Sbjct: 58 -PGHPPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRNLGKSRLTWT 116
Query: 219 PELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKRLSNETPQAG 278
+LHR+F+ AVN LG DKAVPKKIL +M V+ LTRE VASHLQK+R+ LK+ T + G
Sbjct: 117 TQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKKSIPTTSKHG 176
Query: 279 MVAALGSKDSS 289
+ + + D +
Sbjct: 177 VTLSSTALDKT 187
>gi|110289209|gb|AAP54164.2| myb-like DNA-binding domain, SHAQKYF class family protein [Oryza
sativa Japonica Group]
Length = 256
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 75/174 (43%), Positives = 101/174 (58%), Gaps = 10/174 (5%)
Query: 102 LSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRV 161
+++ GDT VMK + +GA D+LLKPVRIEEL NIWQH+ R++ K+ N + N E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEK--- 57
Query: 162 GAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQK---KPRVVWT 218
G + +S E+E DD + N + T + K R+ WT
Sbjct: 58 -PGHPPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRDLGKSRLTWT 116
Query: 219 PELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQ---KFRLYLKR 269
+LHR+F+ AVN LG DKAVPKKIL +M V+ LTRE VASHLQ K+R+ LK+
Sbjct: 117 TQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQVHIKYRMQLKK 170
>gi|326530738|dbj|BAK01167.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 473
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/124 (56%), Positives = 90/124 (72%), Gaps = 7/124 (5%)
Query: 204 NEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKF 263
++D++ KKPRVVW+ ELHRKFV AVNQLG+DKAVPK+IL+LMNVE LTRENVASHLQK+
Sbjct: 23 HDDASASKKPRVVWSVELHRKFVAAVNQLGIDKAVPKRILELMNVEKLTRENVASHLQKY 82
Query: 264 RLYLKRLSN-ETPQAGMVAALGSKDSSYLRIGALDGFGDLRSLNSPGRLSSSAISSSYVP 322
RLYL+RLS + QA + AA G +D +L +GA +G L S + P + SA S+ P
Sbjct: 83 RLYLRRLSAVASQQASIAAAFGGRD-PFLHMGAFEG---LHSYHQP--FAPSASLPSFNP 136
Query: 323 GNMF 326
+
Sbjct: 137 HGLL 140
>gi|345286297|gb|AEN79471.1| B-type response regulator, partial [Oryza rufipogon]
Length = 159
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 71/163 (43%), Positives = 93/163 (57%), Gaps = 7/163 (4%)
Query: 102 LSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRV 161
+++ GDT VMK + +GA D+LLKPVRIEEL NIWQH+ R++ K+ N + N E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKP-- 58
Query: 162 GAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHEN---EDSTTQKKPRVVWT 218
G + +S E+E DD + N D +K R+ WT
Sbjct: 59 --GHPPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRNLRKSRLTWT 116
Query: 219 PELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQ 261
+LHR+F+ AVN LG DKAVPKKIL +M V+ LTRE VASHLQ
Sbjct: 117 TQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQ 159
>gi|345286263|gb|AEN79454.1| B-type response regulator, partial [Oryza rufipogon x Oryza sativa]
Length = 159
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 71/163 (43%), Positives = 94/163 (57%), Gaps = 7/163 (4%)
Query: 102 LSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRV 161
+++ GDT VMK + +GA D+LLKPVRIEEL NIWQH+ R++ K+ N + N E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKP-- 58
Query: 162 GAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQK---KPRVVWT 218
G + +S E+E DD + N + T + K R+ WT
Sbjct: 59 --GHPPSTLAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRDLGKSRLTWT 116
Query: 219 PELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQ 261
+LHR+F+ AVN LG DKAVPKKIL +M V+ LTRE VASHLQ
Sbjct: 117 TQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQ 159
>gi|345286261|gb|AEN79453.1| B-type response regulator, partial [Oryza rufipogon x Oryza sativa]
gi|345286295|gb|AEN79470.1| B-type response regulator, partial [Oryza rufipogon]
Length = 159
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/163 (43%), Positives = 94/163 (57%), Gaps = 7/163 (4%)
Query: 102 LSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRV 161
+++ GDT VMK + +GA D+LLKPVRIEEL NIWQH+ R++ K+ N + N E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKP-- 58
Query: 162 GAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQK---KPRVVWT 218
G + +S E+E DD + N + T + K R+ WT
Sbjct: 59 --GHPPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRNLGKSRLTWT 116
Query: 219 PELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQ 261
+LHR+F+ AVN LG DKAVPKKIL +M V+ LTRE VASHLQ
Sbjct: 117 TQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQ 159
>gi|345286277|gb|AEN79461.1| B-type response regulator, partial [Oryza rufipogon]
Length = 159
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/163 (43%), Positives = 93/163 (57%), Gaps = 7/163 (4%)
Query: 102 LSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRV 161
+++ GDT VMK + +GA D+LLKPVRIEEL NIWQH+ R++ K+ N + N E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKP-- 58
Query: 162 GAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHEN---EDSTTQKKPRVVWT 218
G + +S E+E DD + N D +K R+ WT
Sbjct: 59 --GHPPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGKITDIRDLRKSRLTWT 116
Query: 219 PELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQ 261
+LHR+F+ AVN LG DKAVPKKIL +M V+ LTRE VASHLQ
Sbjct: 117 TQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQ 159
>gi|345286299|gb|AEN79472.1| B-type response regulator, partial [Oryza barthii]
Length = 159
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/163 (44%), Positives = 93/163 (57%), Gaps = 7/163 (4%)
Query: 102 LSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRV 161
+++ GDT VMK + +GA D+LLKPVRIEEL NIWQH+ R++ K+ N + N E
Sbjct: 1 MASSGDTNTVMKYVANGASDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKP-- 58
Query: 162 GAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHEN---EDSTTQKKPRVVWT 218
G + KS E+E DD + N D +K R+ WT
Sbjct: 59 --GHPPSILAMARATPATTKSTATEALLAPLENEVRDDMVNYNGEITDIRDLRKSRLTWT 116
Query: 219 PELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQ 261
+LHR+F+ AVN LG DKAVPKKIL +M V+ LTRE VASHLQ
Sbjct: 117 TQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQ 159
>gi|345286259|gb|AEN79452.1| B-type response regulator, partial [Oryza rufipogon x Oryza sativa]
gi|345286265|gb|AEN79455.1| B-type response regulator, partial [Oryza rufipogon x Oryza sativa]
gi|345286273|gb|AEN79459.1| B-type response regulator, partial [Oryza sativa]
gi|345286285|gb|AEN79465.1| B-type response regulator, partial [Oryza rufipogon]
Length = 159
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/163 (43%), Positives = 94/163 (57%), Gaps = 7/163 (4%)
Query: 102 LSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRV 161
+++ GDT VMK + +GA D+LLKPVRIEEL NIWQH+ R++ K+ N + N E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKP-- 58
Query: 162 GAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQK---KPRVVWT 218
G + +S E+E DD + N + T + K R+ WT
Sbjct: 59 --GHPPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRDLGKSRLTWT 116
Query: 219 PELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQ 261
+LHR+F+ AVN LG DKAVPKKIL +M V+ LTRE VASHLQ
Sbjct: 117 TQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQ 159
>gi|326522516|dbj|BAK07720.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 479
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/249 (34%), Positives = 121/249 (48%), Gaps = 21/249 (8%)
Query: 23 GMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDV--HMP 80
G++VLAVDDDP L+ L LR C YEVT ALK L +N + FD V++
Sbjct: 20 GLKVLAVDDDPVYLRTLTQTLRRCGYEVTAKPSPAEALKELEKNPDGFDFVMTAALTRGR 79
Query: 81 DMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
MDGF LL +G + VI+ S + +G GAC KP+R ++ IWQHV+
Sbjct: 80 GMDGFDLLNRIGERYPV-VILFSGEESMETRRRGTQGGACYLAEKPMRDTQIYMIWQHVL 138
Query: 141 RRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDD 200
R ++ ++ ++ + + EGG ++ R R D + + D
Sbjct: 139 RWRR---ENAAGVVAANANPRPSSEGGH--------LEDTPRKRGRGVNDSGKGKGASDG 187
Query: 201 GHENEDSTTQKKPRVVWTPELHRKFVGAVNQL---GVDKAVPKKILDLMNVEG--LTREN 255
G + T KK + WT E+H FV AV QL G D P I + + V+G LT
Sbjct: 188 GGVQPVTNTTKKKKFEWTSEMHELFVSAVTQLKETGGD--TPNNIREFLEVDGIYLTTTQ 245
Query: 256 VASHLQKFR 264
V+SHLQK+R
Sbjct: 246 VSSHLQKYR 254
>gi|345286269|gb|AEN79457.1| B-type response regulator, partial [Oryza sativa]
Length = 159
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 96/164 (58%), Gaps = 9/164 (5%)
Query: 102 LSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENS-- 159
+++ GDT VMK + +GA D+LLKPVRIEEL NIWQH+ R++ K+ N + N E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 160 --RVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVW 217
+ A A + + + + + + +D + +G E D K R+ W
Sbjct: 61 PPSILAMARATPATTISTATEASLAPLENEVRDDMVNYNG-----EITDIRDLGKSRLTW 115
Query: 218 TPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQ 261
T +LHR+F+ AVN LG DKAVPKKIL +M V+ LTRE VASHLQ
Sbjct: 116 TTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQ 159
>gi|345286281|gb|AEN79463.1| B-type response regulator, partial [Oryza rufipogon]
Length = 159
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 93/163 (57%), Gaps = 7/163 (4%)
Query: 102 LSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRV 161
+++ GDT VMK + +GA D+LLKPVRIEEL NIWQH+ R++ K+ N + N E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKP-- 58
Query: 162 GAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQK---KPRVVWT 218
G + +S E+E D + N + T + K R+ WT
Sbjct: 59 --GHPPSILAMARATPATTRSTATEASLSPLENEVRYDMVNYNGEITDIRDLGKSRLTWT 116
Query: 219 PELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQ 261
+LHR+F+ AVN LG DKAVPKKIL +M V+ LTRE VASHLQ
Sbjct: 117 TQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQ 159
>gi|345286275|gb|AEN79460.1| B-type response regulator, partial [Oryza rufipogon]
gi|345286279|gb|AEN79462.1| B-type response regulator, partial [Oryza rufipogon]
gi|345286287|gb|AEN79466.1| B-type response regulator, partial [Oryza rufipogon]
gi|345286289|gb|AEN79467.1| B-type response regulator, partial [Oryza rufipogon]
gi|345286291|gb|AEN79468.1| B-type response regulator, partial [Oryza rufipogon]
gi|345286293|gb|AEN79469.1| B-type response regulator, partial [Oryza rufipogon]
Length = 159
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 93/163 (57%), Gaps = 7/163 (4%)
Query: 102 LSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRV 161
+++ GDT VMK + +GA D+LLKPVRIEEL NIWQH+ R++ K+ N + N E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKP-- 58
Query: 162 GAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQK---KPRVVWT 218
G + +S E+E D + N + T + K R+ WT
Sbjct: 59 --GHPPSILAMARATPATTRSTATEASLAPLENEVRYDMVNYNGEITDIRDLGKSRLTWT 116
Query: 219 PELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQ 261
+LHR+F+ AVN LG DKAVPKKIL +M V+ LTRE VASHLQ
Sbjct: 117 TQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQ 159
>gi|345286271|gb|AEN79458.1| B-type response regulator, partial [Oryza sativa]
Length = 159
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 93/163 (57%), Gaps = 7/163 (4%)
Query: 102 LSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRV 161
+++ GDT VMK + +GA D+LLKPVRIEEL NIWQH+ R++ K+ N + N E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKP-- 58
Query: 162 GAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQK---KPRVVWT 218
G + +S E+E DD + N + T + K R+ WT
Sbjct: 59 --GHPPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRDLGKSRLTWT 116
Query: 219 PELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQ 261
+LHR+F+ AVN L DKAVPKKIL +M V+ LTRE VASHLQ
Sbjct: 117 TQLHRQFIAAVNHLREDKAVPKKILGIMKVKHLTREQVASHLQ 159
>gi|345286267|gb|AEN79456.1| B-type response regulator, partial [Oryza sativa]
Length = 159
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/163 (42%), Positives = 92/163 (56%), Gaps = 7/163 (4%)
Query: 102 LSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRV 161
+++ GDT VMK + +GA D+LLKPVRIEEL NIWQH+ R++ K+ N + N E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKP-- 58
Query: 162 GAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQK---KPRVVWT 218
G + +S E+E DD + N + T + K R+ WT
Sbjct: 59 --GHPPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRDLGKSRLTWT 116
Query: 219 PELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQ 261
+LHR+F+ AVN LG DKAVPK IL +M V+ LTRE VA HLQ
Sbjct: 117 TQLHRQFIAAVNHLGEDKAVPKNILGIMKVKHLTREQVACHLQ 159
>gi|255570679|ref|XP_002526294.1| hypothetical protein RCOM_0577360 [Ricinus communis]
gi|223534375|gb|EEF36083.1| hypothetical protein RCOM_0577360 [Ricinus communis]
Length = 549
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 129/265 (48%), Gaps = 57/265 (21%)
Query: 62 MLRENRNNFDLVISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACD 121
M++E + F L +++ +MPDMD +LL H L+ D+PVI++S+ K I GA
Sbjct: 1 MVQEQKGRFKLAMANANMPDMDSLELL-HALLDKDIPVILISSETSVFAARKAIAEGASF 59
Query: 122 YLLKPVRIEELKNIWQHVIR-RKKVGPKDQNK---------------------------- 152
L +P+ I++L+ +WQH R R+ + QN+
Sbjct: 60 ILHEPISIDDLRYVWQHAYRNRRNAADQTQNETCQEKENGSNISQYPVIQETTENACKED 119
Query: 153 -----------LLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDG---- 197
L+ ++ S+ + +M+ N Q + ++R + +E +
Sbjct: 120 EVEGNAKETYALIEKDCSKTLENTITEHSMTDSNEKQGVEKIKRRNEVRHEEQREKRVKI 179
Query: 198 --DDDGHE----------NEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDL 245
+++ H+ E S++ ++ RV+WTPELH KF A++ LG KA PK IL++
Sbjct: 180 IFEEENHKWKKTIIEEEIEEKSSSDRRSRVLWTPELHLKFTAAISALGDKKARPKPILEM 239
Query: 246 MNVEGLTRENVASHLQKFRLYLKRL 270
MNV LT+ VASHLQK++ ++R+
Sbjct: 240 MNVPHLTQRQVASHLQKYKSQVRRI 264
>gi|345286283|gb|AEN79464.1| B-type response regulator, partial [Oryza rufipogon]
Length = 159
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/163 (43%), Positives = 94/163 (57%), Gaps = 7/163 (4%)
Query: 102 LSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRV 161
+++ GDT VMK + +GA D+LLKPVRIEEL NIWQH+ R++ K+ N + N E
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKP-- 58
Query: 162 GAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQK---KPRVVWT 218
G + +S E+E DD + N + T + K R+ WT
Sbjct: 59 --GHPPSILAMARATPATTRSTTTEASLAPLENEVRDDMVNYNGEITDIRDLGKSRLTWT 116
Query: 219 PELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQ 261
+LHR+F+ AVN LG DKAVPKKIL +M V+ LTRE VASHLQ
Sbjct: 117 TQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQ 159
>gi|414589528|tpg|DAA40099.1| TPA: hypothetical protein ZEAMMB73_417245 [Zea mays]
Length = 899
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/86 (66%), Positives = 65/86 (75%), Gaps = 3/86 (3%)
Query: 18 DKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQ---AVTALKMLRENRNNFDLVI 74
D+FP+GMRVLAVDDDPTCLKVLEN L CQY T + ++LRE ++ FD VI
Sbjct: 89 DQFPVGMRVLAVDDDPTCLKVLENLLFRCQYHGTSPDNNGPGSHCPELLREKKDQFDPVI 148
Query: 75 SDVHMPDMDGFKLLEHVGLEMDLPVI 100
S+VHMPDMDGFKLLE VGLEMDLP I
Sbjct: 149 SNVHMPDMDGFKLLELVGLEMDLPGI 174
>gi|225434873|ref|XP_002283159.1| PREDICTED: uncharacterized protein LOC100253567 [Vitis vinifera]
Length = 311
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/109 (53%), Positives = 77/109 (70%), Gaps = 6/109 (5%)
Query: 173 TGNSDQNGKSNRKRKDQDGDEDEDG---DDDGHENEDSTTQKKPRVVWTPELHRKFVGAV 229
TG+ D +G +RK + D E+ D ++ +++ + T K+PR+VWTP+LH++FV V
Sbjct: 105 TGDRDGSGSESRKVRKVDCAEEADSAMRTENSNDDPSARTLKRPRLVWTPQLHKRFVDVV 164
Query: 230 NQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKR---LSNETP 275
LG+ AVPK I+ LMNVEGLTRENVASHLQK+RLYLKR LSNE P
Sbjct: 165 GHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLSNEGP 213
>gi|147860003|emb|CAN81044.1| hypothetical protein VITISV_006762 [Vitis vinifera]
Length = 362
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 58/111 (52%), Positives = 78/111 (70%), Gaps = 6/111 (5%)
Query: 173 TGNSDQNGKSNRKRKDQDGDEDEDG---DDDGHENEDSTTQKKPRVVWTPELHRKFVGAV 229
TG+ D +G +RK + D E+ D ++ +++ + T K+PR+VWTP+LH++FV V
Sbjct: 156 TGDRDGSGSESRKVRKVDCAEEADSAMRTENSNDDPSARTLKRPRLVWTPQLHKRFVDVV 215
Query: 230 NQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKR---LSNETPQA 277
LG+ AVPK I+ LMNVEGLTRENVASHLQK+RLYLKR LSNE P +
Sbjct: 216 GHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLSNEGPSS 266
>gi|414589529|tpg|DAA40100.1| TPA: hypothetical protein ZEAMMB73_417245 [Zea mays]
Length = 443
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 57/86 (66%), Positives = 65/86 (75%), Gaps = 3/86 (3%)
Query: 18 DKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTN---QAVTALKMLRENRNNFDLVI 74
D+FP+GMRVLAVDDDPTCLKVLEN L CQY T + ++LRE ++ FD VI
Sbjct: 89 DQFPVGMRVLAVDDDPTCLKVLENLLFRCQYHGTSPDNNGPGSHCPELLREKKDQFDPVI 148
Query: 75 SDVHMPDMDGFKLLEHVGLEMDLPVI 100
S+VHMPDMDGFKLLE VGLEMDLP I
Sbjct: 149 SNVHMPDMDGFKLLELVGLEMDLPGI 174
>gi|413943652|gb|AFW76301.1| hypothetical protein ZEAMMB73_695347 [Zea mays]
Length = 106
Score = 114 bits (286), Expect = 1e-22, Method: Composition-based stats.
Identities = 55/88 (62%), Positives = 66/88 (75%), Gaps = 3/88 (3%)
Query: 16 DIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNN---FDL 72
D+ FP G+RVL VDDD CLKVLE L+ C Y V V A TAL+MLRE +++ FDL
Sbjct: 2 DVKTFPAGLRVLVVDDDRVCLKVLERQLKCCNYNVMVVTDARTALEMLRERKDDGDQFDL 61
Query: 73 VISDVHMPDMDGFKLLEHVGLEMDLPVI 100
VISDV MP+MDGF+LLE +G+EMDLPVI
Sbjct: 62 VISDVVMPNMDGFELLELIGVEMDLPVI 89
>gi|168009967|ref|XP_001757676.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690952|gb|EDQ77316.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 193
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/104 (55%), Positives = 72/104 (69%), Gaps = 4/104 (3%)
Query: 171 MSTGNSDQNGKSNRKRKDQDGD-EDED---GDDDGHENEDSTTQKKPRVVWTPELHRKFV 226
MS S G + RK D D ED D G + +E ++ T K+PR+VWTP+LH++FV
Sbjct: 66 MSFNPSKGGGSAKNARKLADSDFEDTDSGGGPVNSNEEANARTLKRPRLVWTPQLHKRFV 125
Query: 227 GAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKRL 270
AV LG+ AVPK I+ LMNVEGLTRENVASHLQK+RLYLKR+
Sbjct: 126 DAVGHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRM 169
>gi|334185766|ref|NP_001190022.1| protein phytoclock 1 [Arabidopsis thaliana]
gi|332644667|gb|AEE78188.1| protein phytoclock 1 [Arabidopsis thaliana]
Length = 324
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/125 (48%), Positives = 77/125 (61%), Gaps = 4/125 (3%)
Query: 156 QENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRV 215
+E RVG+ G + S+ +G E+GD G E+ T K+PR+
Sbjct: 89 EEEDRVGSSSPGSDSKKQKTSNGDGDDGGGVDPDSAMAAEEGDS-GTEDLSGKTLKRPRL 147
Query: 216 VWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKR---LSN 272
VWTP+LH++FV V LG+ AVPK I+ LMNVEGLTRENVASHLQK+RLYLKR L+N
Sbjct: 148 VWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLTN 207
Query: 273 ETPQA 277
E P A
Sbjct: 208 EGPSA 212
>gi|21593668|gb|AAM65635.1| ARR1 protein-like [Arabidopsis thaliana]
Length = 298
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 56/103 (54%), Positives = 69/103 (66%), Gaps = 9/103 (8%)
Query: 180 GKSNRKRKDQDGDED--------EDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQ 231
G +K+K DG E E+GD G E+ T K+PR+VWTP+LH++FV V
Sbjct: 102 GSDPKKQKKSDGGEAAAVEDSTAEEGDS-GPEDASGKTSKRPRLVWTPQLHKRFVDVVAH 160
Query: 232 LGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKRLSNET 274
LG+ AVPK I+ LMNVEGLTRENVASHLQK+RLYLKR+ T
Sbjct: 161 LGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRIQGLT 203
>gi|15238463|ref|NP_200765.1| myb family transcription factor [Arabidopsis thaliana]
gi|8885561|dbj|BAA97491.1| unnamed protein product [Arabidopsis thaliana]
gi|26449790|dbj|BAC42018.1| ARR1 like protein [Arabidopsis thaliana]
gi|71067052|dbj|BAE16278.1| putative transcription factor [Arabidopsis thaliana]
gi|109946485|gb|ABG48421.1| At5g59570 [Arabidopsis thaliana]
gi|332009824|gb|AED97207.1| myb family transcription factor [Arabidopsis thaliana]
Length = 298
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 56/103 (54%), Positives = 69/103 (66%), Gaps = 9/103 (8%)
Query: 180 GKSNRKRKDQDGDED--------EDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQ 231
G +K+K DG E E+GD G E+ T K+PR+VWTP+LH++FV V
Sbjct: 102 GSDPKKQKKSDGGEAAAVEDSTAEEGDS-GPEDASGKTSKRPRLVWTPQLHKRFVDVVAH 160
Query: 232 LGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKRLSNET 274
LG+ AVPK I+ LMNVEGLTRENVASHLQK+RLYLKR+ T
Sbjct: 161 LGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRIQGLT 203
>gi|15232597|ref|NP_190248.1| protein phytoclock 1 [Arabidopsis thaliana]
gi|79314533|ref|NP_001030823.1| protein phytoclock 1 [Arabidopsis thaliana]
gi|6523067|emb|CAB62334.1| putative protein [Arabidopsis thaliana]
gi|30102630|gb|AAP21233.1| At3g46640 [Arabidopsis thaliana]
gi|71067050|dbj|BAE16277.1| PHYTOCLOCK 1 [Arabidopsis thaliana]
gi|110743672|dbj|BAE99673.1| hypothetical protein [Arabidopsis thaliana]
gi|332644665|gb|AEE78186.1| protein phytoclock 1 [Arabidopsis thaliana]
gi|332644666|gb|AEE78187.1| protein phytoclock 1 [Arabidopsis thaliana]
Length = 323
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 61/125 (48%), Positives = 77/125 (61%), Gaps = 4/125 (3%)
Query: 156 QENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRV 215
+E RVG+ G + S+ +G E+GD G E+ T K+PR+
Sbjct: 89 EEEDRVGSSSPGSDSKKQKTSNGDGDDGGGVDPDSAMAAEEGDS-GTEDLSGKTLKRPRL 147
Query: 216 VWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKR---LSN 272
VWTP+LH++FV V LG+ AVPK I+ LMNVEGLTRENVASHLQK+RLYLKR L+N
Sbjct: 148 VWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLTN 207
Query: 273 ETPQA 277
E P A
Sbjct: 208 EGPSA 212
>gi|168032210|ref|XP_001768612.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680111|gb|EDQ66550.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 185
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 56/100 (56%), Positives = 73/100 (73%), Gaps = 6/100 (6%)
Query: 184 RKRKDQDGDEDED---GDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPK 240
++RKD +D D G + +E ++ T K+PR+VWTP+LH++FV AV LG+ AVPK
Sbjct: 75 KERKDAGNAKDTDSGGGPVNSNEETNARTLKRPRLVWTPQLHKRFVDAVGHLGIKNAVPK 134
Query: 241 KILDLMNVEGLTRENVASHLQKFRLYLKR---LSNETPQA 277
I+ LMNVEGLTRENVASHLQK+RLYLKR LS++ P A
Sbjct: 135 TIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLSSDGPPA 174
>gi|302757555|ref|XP_002962201.1| hypothetical protein SELMODRAFT_36646 [Selaginella moellendorffii]
gi|300170860|gb|EFJ37461.1| hypothetical protein SELMODRAFT_36646 [Selaginella moellendorffii]
Length = 187
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 55/94 (58%), Positives = 69/94 (73%), Gaps = 7/94 (7%)
Query: 191 GDEDED----GDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLM 246
G+E+E G ++ E + T K+PR+VWTP+LH++FV AV LG+ AVPK I+ LM
Sbjct: 83 GEEEEADSGGGPENSGEEPAARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLM 142
Query: 247 NVEGLTRENVASHLQKFRLYLKR---LSNETPQA 277
NVEGLTRENVASHLQK+RLYLKR LS+E P A
Sbjct: 143 NVEGLTRENVASHLQKYRLYLKRMQGLSSEGPSA 176
>gi|168009969|ref|XP_001757677.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690953|gb|EDQ77317.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 197
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 53/94 (56%), Positives = 70/94 (74%), Gaps = 2/94 (2%)
Query: 179 NGKSNRKRKDQDGDEDEDGDDDGHENEDST--TQKKPRVVWTPELHRKFVGAVNQLGVDK 236
+ K+ RK D D ++ + G + NE++ T K+PR+VWTP+LH++FV AV LG+
Sbjct: 80 SAKNARKLADSDFEDTDSGGGPVNSNEEANARTLKRPRLVWTPQLHKRFVDAVGHLGIKN 139
Query: 237 AVPKKILDLMNVEGLTRENVASHLQKFRLYLKRL 270
AVPK I+ LMNVEGLTRENVASHLQK+RLYLKR+
Sbjct: 140 AVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRM 173
>gi|297815826|ref|XP_002875796.1| hypothetical protein ARALYDRAFT_485038 [Arabidopsis lyrata subsp.
lyrata]
gi|297321634|gb|EFH52055.1| hypothetical protein ARALYDRAFT_485038 [Arabidopsis lyrata subsp.
lyrata]
Length = 325
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 54/91 (59%), Positives = 65/91 (71%), Gaps = 3/91 (3%)
Query: 190 DGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVE 249
D D + D G E+ T K+PR+VWTP+LH++FV V LG+ AVPK I+ LMNVE
Sbjct: 123 DPDAAAEEGDSGTEDLSGKTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVE 182
Query: 250 GLTRENVASHLQKFRLYLKR---LSNETPQA 277
GLTRENVASHLQK+RLYLKR L+NE P A
Sbjct: 183 GLTRENVASHLQKYRLYLKRMQGLTNEGPSA 213
>gi|297746038|emb|CBI16094.3| unnamed protein product [Vitis vinifera]
Length = 395
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 76/117 (64%), Gaps = 10/117 (8%)
Query: 167 GQGAMSTGNSDQNGKSNRKRKDQDGD---EDEDGDDDGHENEDSTTQKKPRVVWTPELHR 223
GQ + N+ ++ R R+ + D E+ +DD + T K+PR+VWTP+LH+
Sbjct: 187 GQSHSFSSNNFKSFNEERNREPAEADSAMRTENSNDD----PSARTLKRPRLVWTPQLHK 242
Query: 224 KFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKR---LSNETPQA 277
+FV V LG+ AVPK I+ LMNVEGLTRENVASHLQK+RLYLKR LSNE P +
Sbjct: 243 RFVDVVGHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLSNEGPSS 299
>gi|71067056|dbj|BAE16280.1| NbPCL1 [Nicotiana benthamiana]
Length = 312
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 63/82 (76%), Gaps = 3/82 (3%)
Query: 197 GDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENV 256
GDD +++ T K+PR+VWTP+LH++FV V LG+ AVPK I+ LMNVEGLTRENV
Sbjct: 122 GDDSNNKSASKTLNKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENV 181
Query: 257 ASHLQKFRLYLKR---LSNETP 275
ASHLQK+RLYLKR LSNE P
Sbjct: 182 ASHLQKYRLYLKRMQGLSNEGP 203
>gi|297793511|ref|XP_002864640.1| hypothetical protein ARALYDRAFT_496092 [Arabidopsis lyrata subsp.
lyrata]
gi|297310475|gb|EFH40899.1| hypothetical protein ARALYDRAFT_496092 [Arabidopsis lyrata subsp.
lyrata]
Length = 280
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/102 (54%), Positives = 69/102 (67%), Gaps = 4/102 (3%)
Query: 176 SDQNGKSNRKRKDQDGDED---EDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQL 232
S G +K+K G E E+GD G E+ T K+PR+VWTP+LH++FV V L
Sbjct: 93 SSSPGSDPKKQKKSGGGEAAVAEEGDS-GTEDASGRTSKRPRLVWTPQLHKRFVDVVAHL 151
Query: 233 GVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKRLSNET 274
G+ AVPK I+ LMNVEGLTRENVASHLQK+RLYLKR+ T
Sbjct: 152 GIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRIQGLT 193
>gi|356538978|ref|XP_003537977.1| PREDICTED: putative two-component response regulator ARR21-like
[Glycine max]
Length = 323
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/100 (56%), Positives = 69/100 (69%), Gaps = 4/100 (4%)
Query: 182 SNRKRK-DQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPK 240
S ++RK D E+ D + + T K+PR+VWTP+LH++FV V LG+ AVPK
Sbjct: 113 SRKQRKIDCGAAEEADSAVQTETSAERTAVKRPRLVWTPQLHKRFVDVVAHLGIKNAVPK 172
Query: 241 KILDLMNVEGLTRENVASHLQKFRLYLKR---LSNETPQA 277
I+ LMNVEGLTRENVASHLQK+RLYLKR LSNE P A
Sbjct: 173 TIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLSNEGPSA 212
>gi|84570629|dbj|BAE72699.1| pseudo-response regulator 95 homologue [Lemna paucicostata]
Length = 448
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 107/199 (53%), Gaps = 15/199 (7%)
Query: 18 DKFPIGMRV--LAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVIS 75
+KF GMRV L V+ D + K++ LR C Y+V+ + + A K L+E+ NN DLV++
Sbjct: 23 EKFLRGMRVRVLLVEADDSTRKIVAALLRKCSYKVSSASDGLEAWKTLKESPNNIDLVLT 82
Query: 76 DVHMPDMDGFKLLEHVGLEMD----LPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEE 131
+V +P++ G+ LL + +E D +PVIM+S+ K+V + + GA D+L+KP+R E
Sbjct: 83 EVELPNVSGYALLSMM-MEHDSCKSIPVIMMSSRDSMKMVFECMLKGAADFLVKPIRKNE 141
Query: 132 LKNIWQHVIRRKKV-GPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNG-------KSN 183
L+N+WQHV RR+ G ++ + N+ NS + N G +S+
Sbjct: 142 LRNLWQHVWRRQSANGAENTPPVENETNSEYNSASNHSSYYMDSNHKNKGSEKGNDTQSS 201
Query: 184 RKRKDQDGDEDEDGDDDGH 202
R D D + D D H
Sbjct: 202 CTRPDTDAETSSDLMSDQH 220
>gi|226875201|gb|ACO88948.1| cytokinin B-type response regulator 5 [Vitis vinifera]
Length = 81
Score = 111 bits (277), Expect = 1e-21, Method: Composition-based stats.
Identities = 52/81 (64%), Positives = 63/81 (77%)
Query: 32 DPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDGFKLLEHV 91
DPT LK+LE L+ C YEVT+ A AL +LRE ++ +D+VISDV+MPDMDGFKLLE V
Sbjct: 1 DPTWLKILEKMLKKCLYEVTICGLARDALNLLRERKDGYDIVISDVNMPDMDGFKLLELV 60
Query: 92 GLEMDLPVIMLSAYGDTKLVM 112
GLEMDLPVIM+S G+T VM
Sbjct: 61 GLEMDLPVIMMSVDGETSRVM 81
>gi|222424975|dbj|BAH20438.1| AT3G46640 [Arabidopsis thaliana]
Length = 323
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 77/125 (61%), Gaps = 4/125 (3%)
Query: 156 QENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRV 215
+E RVG+ G + S+ +G E+GD G E+ T K+PR+
Sbjct: 89 EEEDRVGSSSPGSDSKKQKTSNGDGDDGGGVDPDSAMAAEEGDS-GTEDLSGKTLKRPRL 147
Query: 216 VWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKR---LSN 272
VWTP+LH++FV V LG+ AVPK I+ +MNVEGLTRENVASHLQK+RLYLKR L+N
Sbjct: 148 VWTPQLHKRFVDVVAHLGIKNAVPKTIMQVMNVEGLTRENVASHLQKYRLYLKRMQGLTN 207
Query: 273 ETPQA 277
E P A
Sbjct: 208 EGPSA 212
>gi|255086767|ref|XP_002509350.1| g2-like myb-family transcription factor [Micromonas sp. RCC299]
gi|226524628|gb|ACO70608.1| g2-like myb-family transcription factor [Micromonas sp. RCC299]
Length = 306
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/71 (69%), Positives = 57/71 (80%)
Query: 211 KKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKRL 270
KKPR+VWTPELH +F+ AVN LG+ AVPK IL LMNVEG+TRENVASHLQK+RLYLKRL
Sbjct: 58 KKPRLVWTPELHMRFMNAVNHLGIKNAVPKTILQLMNVEGMTRENVASHLQKYRLYLKRL 117
Query: 271 SNETPQAGMVA 281
+ P + A
Sbjct: 118 AGVPPSTPLPA 128
>gi|356542300|ref|XP_003539607.1| PREDICTED: putative two-component response regulator ARR21-like
isoform 1 [Glycine max]
gi|356542302|ref|XP_003539608.1| PREDICTED: putative two-component response regulator ARR21-like
isoform 2 [Glycine max]
Length = 306
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 72/107 (67%), Gaps = 5/107 (4%)
Query: 174 GNSDQNGKSNRKRKDQDGDEDEDGDD--DGHENEDSTTQKKPRVVWTPELHRKFVGAVNQ 231
+ D +G +RK++ D E+ D + + T K+PR+VWTP+LH++FV V
Sbjct: 103 ADRDGSGSDSRKQRKIDCGVAEEADSAVRTETSAERTAVKRPRLVWTPQLHKRFVDVVAH 162
Query: 232 LGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKR---LSNETP 275
LG+ AVPK I+ LMNVEGLTRENVASHLQK+RLYLKR LSNE P
Sbjct: 163 LGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLSNEGP 209
>gi|297847198|ref|XP_002891480.1| hypothetical protein ARALYDRAFT_474061 [Arabidopsis lyrata subsp.
lyrata]
gi|297337322|gb|EFH67739.1| hypothetical protein ARALYDRAFT_474061 [Arabidopsis lyrata subsp.
lyrata]
Length = 530
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 80/126 (63%)
Query: 17 IDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISD 76
+ +FP VL VD + T L ++ ++ Y+VT+ A AL L ++ ++VI D
Sbjct: 27 LSQFPGNTNVLVVDTNFTTLLNMKQIMKQYAYQVTIETDAEKALAYLTSCKHEINIVIWD 86
Query: 77 VHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIW 136
HMP +DG + L+ +G +MDLPV+++S T+ VMK +GACDY++KPV+ E + NIW
Sbjct: 87 FHMPGIDGLQALKSIGSKMDLPVVIMSDDNQTESVMKATINGACDYVVKPVKEEVIANIW 146
Query: 137 QHVIRR 142
QH++R+
Sbjct: 147 QHIVRK 152
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 69/120 (57%), Gaps = 12/120 (10%)
Query: 203 ENEDSTTQKKPRVVWTPELHRKFVGAVNQLG-VDKAVPKKILDL---MNVEGLTRENVAS 258
E +++ +KPR+ WT +LH+KF+ A+ +G ++KA PK +LD M VEG+TR NVAS
Sbjct: 325 EKKEAKKPRKPRMTWTEDLHQKFLEAIEIVGGIEKANPKVLLDCLLEMKVEGITRSNVAS 384
Query: 259 HLQKFRLYLK--RLSNETPQAGMVAALGSKDSSYLRIGALDGFGDLRSLNSPGRLSSSAI 316
HLQK R+ L+ ++ ET + G A S L G ++ + SP ++ A+
Sbjct: 385 HLQKHRINLEENQIPEETQEDGWSTAYNRPAPS------LQGSDNVNTTISPYLMNGRAV 438
>gi|224106431|ref|XP_002314163.1| predicted protein [Populus trichocarpa]
gi|222850571|gb|EEE88118.1| predicted protein [Populus trichocarpa]
Length = 210
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 63/83 (75%), Gaps = 3/83 (3%)
Query: 198 DDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVA 257
D DG +E T K+PR+VWTP+LH++FV V LG+ AVPK I+ LMNVEGLTRENVA
Sbjct: 117 DRDGSGSEARKTLKRPRLVWTPQLHKRFVDVVGHLGIKNAVPKTIMQLMNVEGLTRENVA 176
Query: 258 SHLQKFRLYLKR---LSNETPQA 277
SHLQK+RLYLKR LS+E P A
Sbjct: 177 SHLQKYRLYLKRMQGLSSEGPSA 199
>gi|449455086|ref|XP_004145284.1| PREDICTED: uncharacterized protein LOC101216423 [Cucumis sativus]
gi|449470904|ref|XP_004153145.1| PREDICTED: uncharacterized protein LOC101205712 [Cucumis sativus]
gi|449525506|ref|XP_004169758.1| PREDICTED: uncharacterized LOC101205712 [Cucumis sativus]
Length = 336
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 71/102 (69%), Gaps = 6/102 (5%)
Query: 180 GKSNRKRKDQDGDEDEDG---DDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDK 236
G +RK + D E+ D D+ ++ + T K+PR+VWTP+LH++FV V LG+
Sbjct: 122 GSDSRKLRKVDCAEEADSALRTDNSMDDPSARTLKRPRLVWTPQLHKRFVDVVAHLGIKN 181
Query: 237 AVPKKILDLMNVEGLTRENVASHLQKFRLYLKRL---SNETP 275
AVPK I+ LMNVEGLTRENVASHLQK+RLYLKR+ SNE P
Sbjct: 182 AVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGSSNEGP 223
>gi|355469068|gb|ACU42263.2| pseudo response regulator 37 [Pisum sativum]
Length = 792
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 81/128 (63%), Gaps = 6/128 (4%)
Query: 20 FPI-GMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVH 78
P+ ++VL VDDD + V+ LR C YEVT + + A K L + N DLV+++V
Sbjct: 81 LPVTSIKVLLVDDDDSTRNVVCALLRNCGYEVTAVSNGLQAWKALEDPGNRIDLVLTEVA 140
Query: 79 MPDMDGF----KLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKN 134
MP + G K++ H+ L+ ++PVIM+S++ +V K ++ GA D+L+KP+R ELKN
Sbjct: 141 MPFVSGIGLLCKIMSHIALK-NIPVIMMSSHDSMGIVFKCLSKGAADFLVKPIRRNELKN 199
Query: 135 IWQHVIRR 142
+WQHV RR
Sbjct: 200 LWQHVWRR 207
>gi|255928914|gb|ACU42264.1| pseudo response regulator 37 [Pisum sativum]
Length = 780
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 81/128 (63%), Gaps = 6/128 (4%)
Query: 20 FPI-GMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVH 78
P+ ++VL VDDD + V+ LR C YEVT + + A K L + N DLV+++V
Sbjct: 69 LPVTSIKVLLVDDDDSTRNVVCALLRNCGYEVTAVSNGLQAWKALEDPGNRIDLVLTEVA 128
Query: 79 MPDMDGF----KLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKN 134
MP + G K++ H+ L+ ++PVIM+S++ +V K ++ GA D+L+KP+R ELKN
Sbjct: 129 MPFVSGIGLLCKIMSHIALK-NIPVIMMSSHDSMGIVFKCLSKGAADFLVKPIRRNELKN 187
Query: 135 IWQHVIRR 142
+WQHV RR
Sbjct: 188 LWQHVWRR 195
>gi|357472859|ref|XP_003606714.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|357472893|ref|XP_003606731.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|355507769|gb|AES88911.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|355507786|gb|AES88928.1| Two-component response regulator ARR1 [Medicago truncatula]
Length = 312
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 76/128 (59%), Gaps = 3/128 (2%)
Query: 153 LLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQKK 212
+ NQ N + + D +G +RK + D +E + + T K+
Sbjct: 72 ITNQINQTMSCEIEDIEEDEEPDRDGSGSDSRKHRKIDSVIEEVEAEADSAVRTTETIKR 131
Query: 213 PRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKR--- 269
PR+VWTP+LH++FV V LG+ AVPK I+ LMNVEGLTRENVASHLQK+RLYLKR
Sbjct: 132 PRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQG 191
Query: 270 LSNETPQA 277
LSN+ P +
Sbjct: 192 LSNDAPSS 199
>gi|18407171|ref|NP_566085.1| two-component response regulator-like APRR9 [Arabidopsis thaliana]
gi|52783231|sp|Q8L500.2|APRR9_ARATH RecName: Full=Two-component response regulator-like APRR9; AltName:
Full=Pseudo-response regulator 9
gi|9247022|gb|AAF86253.1|AF272040_1 timing of CAB expression 1-like protein [Arabidopsis thaliana]
gi|10281000|dbj|BAB13741.1| pseudo-response regulator 9 [Arabidopsis thaliana]
gi|20197322|gb|AAC33497.2| expressed protein [Arabidopsis thaliana]
gi|62320652|dbj|BAD95319.1| hypothetical protein [Arabidopsis thaliana]
gi|330255660|gb|AEC10754.1| two-component response regulator-like APRR9 [Arabidopsis thaliana]
Length = 468
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 80/123 (65%), Gaps = 5/123 (4%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+RVL V+ D + +++ LR C Y+V + + A ++L+E +N DL+++++ +P +
Sbjct: 37 LRVLLVESDYSTRQIITALLRKCCYKVVAVSDGLAAWEVLKEKSHNIDLILTELDLPSIS 96
Query: 84 GFKLL----EHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
GF LL EH + ++PVIM+S+ K+V+K + GA DYL+KP+R ELKN+WQHV
Sbjct: 97 GFALLALVMEHEACK-NIPVIMMSSQDSIKMVLKCMLRGAADYLIKPMRKNELKNLWQHV 155
Query: 140 IRR 142
RR
Sbjct: 156 WRR 158
>gi|255079068|ref|XP_002503114.1| predicted protein [Micromonas sp. RCC299]
gi|226518380|gb|ACO64372.1| predicted protein [Micromonas sp. RCC299]
Length = 585
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 47/71 (66%), Positives = 59/71 (83%)
Query: 200 DGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASH 259
+G E++ + K+PR+VWTP LH++FV AV+ LG+ AVPK I+ LMNVEGLTRENVASH
Sbjct: 231 EGSEDDHAHALKRPRLVWTPPLHKRFVDAVSHLGIKNAVPKTIMQLMNVEGLTRENVASH 290
Query: 260 LQKFRLYLKRL 270
LQK+RLYLKRL
Sbjct: 291 LQKYRLYLKRL 301
>gi|218196749|gb|EEC79176.1| hypothetical protein OsI_19863 [Oryza sativa Indica Group]
Length = 385
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 69/95 (72%), Gaps = 1/95 (1%)
Query: 50 VTVTNQAVTALKMLRENRNNFDLVISDVHMP-DMDGFKLLEHVGLEMDLPVIMLSAYGDT 108
VT A A++ L EN ++D+V+++VH P +DGF LL++ G +MDLPV++ SA D
Sbjct: 6 VTPKTAARDAVEELHENPWSYDMVLTEVHAPAGIDGFNLLQYAGTDMDLPVVVFSADDDK 65
Query: 109 KLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRK 143
+ V+K + GACDYL+KP+R EELKNIWQHV RRK
Sbjct: 66 RTVLKCVNSGACDYLVKPLRHEELKNIWQHVYRRK 100
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 32/45 (71%)
Query: 99 VIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRK 143
+++ S D +VM+ + +GACDY++KP+ E +K IW+HV+R +
Sbjct: 143 LLVFSEGEDVVMVMRTVMNGACDYMVKPMTSEAIKFIWKHVLRWR 187
>gi|226875197|gb|ACO88946.1| cytokinin B-type response regulator 3 [Vitis vinifera]
Length = 76
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 53/76 (69%), Positives = 63/76 (82%)
Query: 122 YLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGK 181
YLLKPVRIEELKNIWQHVIRRKK+ KDQNK +Q+N+ GEGG+G S+ N+DQNGK
Sbjct: 1 YLLKPVRIEELKNIWQHVIRRKKIDSKDQNKSXDQDNALHADGEGGEGPPSSSNADQNGK 60
Query: 182 SNRKRKDQDGDEDEDG 197
NRKRKDQ+ DE+E+G
Sbjct: 61 LNRKRKDQNEDEEEEG 76
>gi|297824763|ref|XP_002880264.1| pseudo-response regulator 9 [Arabidopsis lyrata subsp. lyrata]
gi|297326103|gb|EFH56523.1| pseudo-response regulator 9 [Arabidopsis lyrata subsp. lyrata]
Length = 476
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 80/123 (65%), Gaps = 5/123 (4%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+RVL V+ D + +++ LR C Y+V + + A ++L+E +N DL+++++ +P +
Sbjct: 37 LRVLLVESDYSTRQIITALLRKCCYKVVAVSDGLAAWEVLKEKSHNIDLILTELDLPSIS 96
Query: 84 GFKLL----EHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
GF LL EH + ++PVIM+S+ K+V+K + GA DYL+KP+R ELKN+WQHV
Sbjct: 97 GFALLALVMEHEACK-NIPVIMMSSQDSIKMVLKCMLRGAADYLIKPMRKNELKNLWQHV 155
Query: 140 IRR 142
RR
Sbjct: 156 WRR 158
>gi|15222067|ref|NP_175345.1| protein response regulator 19 [Arabidopsis thaliana]
gi|332194281|gb|AEE32402.1| protein response regulator 19 [Arabidopsis thaliana]
Length = 608
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 82/133 (61%)
Query: 17 IDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISD 76
+ +FP VL VD + T L ++ ++ Y+V++ A AL L ++ ++VI D
Sbjct: 27 LSQFPGNTNVLVVDTNFTTLLNMKQIMKQYAYQVSIETDAEKALAFLTSCKHEINIVIWD 86
Query: 77 VHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIW 136
HMP +DG + L+ + ++DLPV+++S T+ VMK +GACDY++KPV+ E + NIW
Sbjct: 87 FHMPGIDGLQALKSITSKLDLPVVIMSDDNQTESVMKATFYGACDYVVKPVKEEVMANIW 146
Query: 137 QHVIRRKKVGPKD 149
QH++R++ + D
Sbjct: 147 QHIVRKRLIFKPD 159
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
Query: 203 ENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQK 262
E + +KPR+ WT ELH+KF+ A+ +G + V + L M +EG+TR NVASHLQK
Sbjct: 411 EKKQGKKPRKPRMTWTEELHQKFLEAIEIIGANPKVLVECLQEMRIEGITRSNVASHLQK 470
Query: 263 FRLYLKRLSNETPQA----GMVAALGS 285
R+ L+ N+ PQ G A G+
Sbjct: 471 HRINLEE--NQIPQQTQGNGWATAYGT 495
>gi|7770351|gb|AAF69721.1|AC016041_26 F27J15.4 [Arabidopsis thaliana]
Length = 612
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 82/133 (61%)
Query: 17 IDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISD 76
+ +FP VL VD + T L ++ ++ Y+V++ A AL L ++ ++VI D
Sbjct: 27 LSQFPGNTNVLVVDTNFTTLLNMKQIMKQYAYQVSIETDAEKALAFLTSCKHEINIVIWD 86
Query: 77 VHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIW 136
HMP +DG + L+ + ++DLPV+++S T+ VMK +GACDY++KPV+ E + NIW
Sbjct: 87 FHMPGIDGLQALKSITSKLDLPVVIMSDDNQTESVMKATFYGACDYVVKPVKEEVMANIW 146
Query: 137 QHVIRRKKVGPKD 149
QH++R++ + D
Sbjct: 147 QHIVRKRLIFKPD 159
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 10/83 (12%)
Query: 211 KKPRVVWTPELHRKFVGAVNQL-GVDKAVPKKILDL---MNVEGLTRENVASHLQKFRLY 266
+KPR+ WT ELH+KF+ A+ + G++KA PK +++ M +EG+TR NVASHLQK R+
Sbjct: 419 RKPRMTWTEELHQKFLEAIEIIGGIEKANPKVLVECLQEMRIEGITRSNVASHLQKHRIN 478
Query: 267 LKRLSNETPQA----GMVAALGS 285
L+ N+ PQ G A G+
Sbjct: 479 LEE--NQIPQQTQGNGWATAYGT 499
>gi|334183176|ref|NP_001185179.1| protein response regulator 19 [Arabidopsis thaliana]
gi|332194282|gb|AEE32403.1| protein response regulator 19 [Arabidopsis thaliana]
Length = 622
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 82/133 (61%)
Query: 17 IDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISD 76
+ +FP VL VD + T L ++ ++ Y+V++ A AL L ++ ++VI D
Sbjct: 27 LSQFPGNTNVLVVDTNFTTLLNMKQIMKQYAYQVSIETDAEKALAFLTSCKHEINIVIWD 86
Query: 77 VHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIW 136
HMP +DG + L+ + ++DLPV+++S T+ VMK +GACDY++KPV+ E + NIW
Sbjct: 87 FHMPGIDGLQALKSITSKLDLPVVIMSDDNQTESVMKATFYGACDYVVKPVKEEVMANIW 146
Query: 137 QHVIRRKKVGPKD 149
QH++R++ + D
Sbjct: 147 QHIVRKRLIFKPD 159
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 54/93 (58%), Gaps = 20/93 (21%)
Query: 211 KKPRVVWTPELHRKFVGAVNQL-GVDKAVPKKILDL---MNVEGLTRENVASHLQ----- 261
+KPR+ WT ELH+KF+ A+ + G++KA PK +++ M +EG+TR NVASHLQ
Sbjct: 419 RKPRMTWTEELHQKFLEAIEIIGGIEKANPKVLVECLQEMRIEGITRSNVASHLQVKKKT 478
Query: 262 -----KFRLYLKRLSNETPQA----GMVAALGS 285
K R+ L+ N+ PQ G A G+
Sbjct: 479 HTLNIKHRINLEE--NQIPQQTQGNGWATAYGT 509
>gi|359490833|ref|XP_003634174.1| PREDICTED: two-component response regulator-like APRR5-like [Vitis
vinifera]
Length = 688
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/136 (38%), Positives = 83/136 (61%), Gaps = 10/136 (7%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+RVL V+ D + +++ LR C Y+V + A ++L+ +N DL++++V +P +
Sbjct: 40 LRVLLVEADDSTRQIIAALLRKCSYKVAAVPDGLKAWEVLKARPHNIDLILTEVELPSIS 99
Query: 84 GFKLL----EHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
GF LL EH + ++PVIM+S++G V K + GA D+L+KPVR ELKN+WQHV
Sbjct: 100 GFALLTLVMEH-EICKNIPVIMMSSHGSINTVYKCMLRGAADFLVKPVRRNELKNLWQHV 158
Query: 140 IRRKKV-----GPKDQ 150
RR+ GP+D+
Sbjct: 159 WRRQSSTVSGNGPQDE 174
>gi|168027173|ref|XP_001766105.1| circadian clock protein PRR4 [Physcomitrella patens subsp. patens]
gi|162682748|gb|EDQ69164.1| circadian clock protein PRR4 [Physcomitrella patens subsp. patens]
Length = 1056
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 77/123 (62%), Gaps = 5/123 (4%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
++VL V+DD V+ LR C YEVT A +L E +NFDLV++DV MP +
Sbjct: 306 LKVLLVEDDDATRHVVGALLRNCNYEVTPVANGSLAWGLLEEANSNFDLVLTDVVMPYLS 365
Query: 84 GFKLLEHVGLEMD----LPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + ++ + +P++++S+Y +V + ++ GACDYL+KPVR ELKN+WQHV
Sbjct: 366 GVGLLSKM-MKREACKRVPIVIMSSYDSLGIVFRCLSKGACDYLVKPVRKNELKNLWQHV 424
Query: 140 IRR 142
R+
Sbjct: 425 WRK 427
>gi|302143985|emb|CBI23090.3| unnamed protein product [Vitis vinifera]
Length = 747
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 84/137 (61%), Gaps = 10/137 (7%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+RVL V+ D + +++ LR C Y+V + A ++L+ +N DL++++V +P +
Sbjct: 40 LRVLLVEADDSTRQIIAALLRKCSYKVAAVPDGLKAWEVLKARPHNIDLILTEVELPSIS 99
Query: 84 GFKLL----EHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
GF LL EH + ++PVIM+S++G V K + GA D+L+KPVR ELKN+WQHV
Sbjct: 100 GFALLTLVMEH-EICKNIPVIMMSSHGSINTVYKCMLRGAADFLVKPVRRNELKNLWQHV 158
Query: 140 IRRKKV-----GPKDQN 151
RR+ GP+D++
Sbjct: 159 WRRQSSTVSGNGPQDES 175
>gi|303284239|ref|XP_003061410.1| g2-like myb-family transcription factor [Micromonas pusilla
CCMP1545]
gi|226456740|gb|EEH54040.1| g2-like myb-family transcription factor [Micromonas pusilla
CCMP1545]
Length = 344
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/80 (62%), Positives = 57/80 (71%)
Query: 198 DDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVA 257
D E KK R+VWTPELH +F+ AVN LG+ AVPK IL LMNVEG+TRENVA
Sbjct: 46 SDGEKEATSGRATKKRRLVWTPELHVRFMSAVNHLGITNAVPKTILQLMNVEGMTRENVA 105
Query: 258 SHLQKFRLYLKRLSNETPQA 277
SHLQK+RLYLKRL+ P A
Sbjct: 106 SHLQKYRLYLKRLAGVPPNA 125
>gi|116787129|gb|ABK24384.1| unknown [Picea sitchensis]
Length = 274
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/155 (43%), Positives = 88/155 (56%), Gaps = 16/155 (10%)
Query: 130 EELKNIWQHVIRRK-----KVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNR 184
EEL + Q++I K+ P + E+ V G G Q + G
Sbjct: 18 EELMPLTQNLITPDLAAAFKIHPSSASASAPTESGSVFPGSGQQ-------QQRPGVEPP 70
Query: 185 KRKDQDGDEDEDGD-DDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKIL 243
KR + + +E G + E + T K+PR+VWTP+LH++FV AV LG+ AVPK I+
Sbjct: 71 KRIELEEEESSVGGVTENVGEEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIM 130
Query: 244 DLMNVEGLTRENVASHLQKFRLYLKR---LSNETP 275
LMNVEGLTRENVASHLQK+RLYLKR LS+E P
Sbjct: 131 QLMNVEGLTRENVASHLQKYRLYLKRMQGLSSEGP 165
>gi|356539090|ref|XP_003538033.1| PREDICTED: LOW QUALITY PROTEIN: two-component response
regulator-like APRR3-like [Glycine max]
Length = 792
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 79/123 (64%), Gaps = 5/123 (4%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
++VL V+DD + V+ LR C YEVT + + A K+L + N DLV+++V MP +
Sbjct: 90 IKVLLVEDDDSTRHVVRALLRNCSYEVTAVSNGLQAWKVLEDPENGIDLVLTEVAMPILS 149
Query: 84 GF----KLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G K++ H L+ ++PVIM+S++ +V K ++ GA D+L+KP+R ELKN+WQHV
Sbjct: 150 GIGLLCKIMSHKTLK-NIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRRNELKNLWQHV 208
Query: 140 IRR 142
RR
Sbjct: 209 WRR 211
>gi|325910798|dbj|BAJ83829.1| circadian response regulator 2b [Physcomitrella patens subsp.
patens]
Length = 917
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
++VL V+DD V+ LR C YEVT A +L E +NFDLV++DV MP +
Sbjct: 186 LKVLLVEDDDATRHVVGALLRNCNYEVTPVANGSLAWGLLEEANSNFDLVLTDVVMPYLS 245
Query: 84 GFKLLEHVGLE---MDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
G LL + +P++++S+Y +V + ++ GACDYL+KPVR ELKN+WQHV
Sbjct: 246 GVGLLSKMMKREACKRVPIVIMSSYDSLGIVFRCLSKGACDYLVKPVRKNELKNLWQHVW 305
Query: 141 RR 142
R+
Sbjct: 306 RK 307
>gi|357126972|ref|XP_003565161.1| PREDICTED: uncharacterized protein LOC100834697 [Brachypodium
distachyon]
Length = 256
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/85 (58%), Positives = 60/85 (70%), Gaps = 3/85 (3%)
Query: 194 DEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTR 253
D D +E T K+PR+VW P+LH++FV V LG+ AVPK I+ LMNVEGLTR
Sbjct: 96 DTGADSAAAASELEKTSKRPRMVWNPQLHKRFVDVVAHLGIKSAVPKTIMQLMNVEGLTR 155
Query: 254 ENVASHLQKFRLYLKR---LSNETP 275
ENVASHLQK+RLY+KR LSNE P
Sbjct: 156 ENVASHLQKYRLYVKRMQGLSNEGP 180
>gi|225435163|ref|XP_002281776.1| PREDICTED: two-component response regulator-like PRR73-like [Vitis
vinifera]
Length = 785
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 108/203 (53%), Gaps = 16/203 (7%)
Query: 20 FPI-GMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVH 78
PI ++VL V++D + V+ LR C YEVT + A K+L + N+ D+V+++V
Sbjct: 90 LPIRSLKVLLVENDDSTRHVVTALLRNCSYEVTAVANGLQAWKILEDLTNHIDIVLTEVV 149
Query: 79 MPDMDGF----KLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKN 134
MP + G K++ H + ++PVIM+S++ +V K ++ GA D+L+KP+R ELKN
Sbjct: 150 MPFISGIGLLCKIMSHKTFK-NIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRKNELKN 208
Query: 135 IWQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQ--NGKSNRKRKDQDGD 192
+WQHV RR ++ Q V + + +TG+SD+ NG + G
Sbjct: 209 LWQHVWRRCHSSSGSGSESGTQTKKSVKSKSNDESENNTGSSDERDNGST--------GP 260
Query: 193 EDEDGDDDGHENEDSTTQKKPRV 215
DG D+G + S T++ V
Sbjct: 261 SIRDGSDNGSGTQSSWTKRAAEV 283
>gi|412992495|emb|CCO18475.1| predicted protein [Bathycoccus prasinos]
Length = 1199
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 77/123 (62%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+ VL VDD+ C V LR C Y VT A+++LR F+L+++DV MPD+D
Sbjct: 51 IHVLVVDDERICRAVTSQVLRKCGYRVTTCESGAEAIELLRRG-TEFNLLLTDVMMPDID 109
Query: 84 GFKLLEHVGLEMD---LPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
G KLL+HV LPVIM+SA +++V + + GA DYLLKPV ++++K +WQHV
Sbjct: 110 GPKLLQHVRHHSQFSQLPVIMMSANQHSEIVFECVRSGADDYLLKPVTVKQVKLLWQHVW 169
Query: 141 RRK 143
R++
Sbjct: 170 RKQ 172
>gi|303283678|ref|XP_003061130.1| g2-like myb-family transcription factor [Micromonas pusilla
CCMP1545]
gi|226457481|gb|EEH54780.1| g2-like myb-family transcription factor [Micromonas pusilla
CCMP1545]
Length = 532
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/71 (67%), Positives = 59/71 (83%), Gaps = 1/71 (1%)
Query: 200 DGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASH 259
DG E+ D+ K+PR+VWTP LH++FV AV+ LG+ AVPK I+ LMNV+GLTRENVASH
Sbjct: 242 DGSED-DAQALKRPRLVWTPPLHKRFVDAVSHLGIRNAVPKTIMQLMNVDGLTRENVASH 300
Query: 260 LQKFRLYLKRL 270
LQK+RLYLKRL
Sbjct: 301 LQKYRLYLKRL 311
>gi|413949280|gb|AFW81929.1| putative MYB DNA-binding domain superfamily protein [Zea mays]
Length = 299
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 58/67 (86%)
Query: 204 NEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKF 263
+E + T K+PR+VWTP+LH++FV AV QLG+ AVPK I+ LM+V+GLTRENVASHLQK+
Sbjct: 79 DEPARTLKRPRLVWTPQLHKRFVDAVAQLGIKNAVPKTIMQLMSVDGLTRENVASHLQKY 138
Query: 264 RLYLKRL 270
RLYLKR+
Sbjct: 139 RLYLKRM 145
>gi|255559022|ref|XP_002520534.1| DNA binding protein, putative [Ricinus communis]
gi|223540376|gb|EEF41947.1| DNA binding protein, putative [Ricinus communis]
Length = 316
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/80 (62%), Positives = 61/80 (76%), Gaps = 3/80 (3%)
Query: 201 GHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHL 260
G + + T K+PR+VWTP+LH++FV V LG+ AVPK I+ LMNVEGLTRENVASHL
Sbjct: 144 GEDPATARTLKRPRLVWTPQLHKRFVDVVAYLGIKNAVPKTIMQLMNVEGLTRENVASHL 203
Query: 261 QKFRLYLKR---LSNETPQA 277
QK+RLYLKR LS+E P A
Sbjct: 204 QKYRLYLKRMQGLSSEGPSA 223
>gi|297746178|emb|CBI16234.3| unnamed protein product [Vitis vinifera]
Length = 482
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 108/203 (53%), Gaps = 16/203 (7%)
Query: 20 FPI-GMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVH 78
PI ++VL V++D + V+ LR C YEVT + A K+L + N+ D+V+++V
Sbjct: 90 LPIRSLKVLLVENDDSTRHVVTALLRNCSYEVTAVANGLQAWKILEDLTNHIDIVLTEVV 149
Query: 79 MPDMDGF----KLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKN 134
MP + G K++ H + ++PVIM+S++ +V K ++ GA D+L+KP+R ELKN
Sbjct: 150 MPFISGIGLLCKIMSHKTFK-NIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRKNELKN 208
Query: 135 IWQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQ--NGKSNRKRKDQDGD 192
+WQHV RR ++ Q V + + +TG+SD+ NG + G
Sbjct: 209 LWQHVWRRCHSSSGSGSESGTQTKKSVKSKSNDESENNTGSSDERDNGST--------GP 260
Query: 193 EDEDGDDDGHENEDSTTQKKPRV 215
DG D+G + S T++ V
Sbjct: 261 SIRDGSDNGSGTQSSWTKRAAEV 283
>gi|84570625|dbj|BAE72697.1| pseudo-response regulator 37 homologue [Lemna paucicostata]
Length = 617
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 80/128 (62%), Gaps = 6/128 (4%)
Query: 20 FPI-GMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVH 78
P+ ++VL V++D + V+ LR C YEVT + A K+L NN D+V+++V
Sbjct: 72 LPVKSLKVLLVENDDSTRHVVNALLRNCSYEVTAVANGLEAWKVLENLSNNVDIVLTEVV 131
Query: 79 MPDMDGF----KLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKN 134
MP + G K++ H+ L+ +PVIM+S++ +V K ++ GA D+L+KP+R ELKN
Sbjct: 132 MPSLSGIGLLDKIMSHITLKT-IPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRKNELKN 190
Query: 135 IWQHVIRR 142
+WQHV RR
Sbjct: 191 LWQHVWRR 198
>gi|28948379|pdb|1IRZ|A Chain A, Solution Structure Of Arr10-B Belonging To The Garp Family
Of Plant Myb-Related Dna Binding Motifs Of The
Arabidopsis Response Regulators
Length = 64
Score = 106 bits (264), Expect = 5e-20, Method: Composition-based stats.
Identities = 48/64 (75%), Positives = 57/64 (89%)
Query: 208 TTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYL 267
T QKKPRV+WT ELH KF+ AV+ LGV++AVPKKILDLMNV+ LTRENVASHLQKFR+ L
Sbjct: 1 TAQKKPRVLWTHELHNKFLAAVDHLGVERAVPKKILDLMNVDKLTRENVASHLQKFRVAL 60
Query: 268 KRLS 271
K++S
Sbjct: 61 KKVS 64
>gi|297806505|ref|XP_002871136.1| myb family transcription factor [Arabidopsis lyrata subsp. lyrata]
gi|297316973|gb|EFH47395.1| myb family transcription factor [Arabidopsis lyrata subsp. lyrata]
Length = 265
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 47/74 (63%), Positives = 60/74 (81%), Gaps = 2/74 (2%)
Query: 197 GDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENV 256
GD G +E + T K+PR+VWTP+LH++FV AV LG+ AVPK I+ LM+V+GLTRENV
Sbjct: 67 GDSTG--DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENV 124
Query: 257 ASHLQKFRLYLKRL 270
ASHLQK+RLYLKR+
Sbjct: 125 ASHLQKYRLYLKRM 138
>gi|21537017|gb|AAM61358.1| unknown [Arabidopsis thaliana]
Length = 266
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 47/74 (63%), Positives = 60/74 (81%), Gaps = 2/74 (2%)
Query: 197 GDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENV 256
GD G +E + T K+PR+VWTP+LH++FV AV LG+ AVPK I+ LM+V+GLTRENV
Sbjct: 68 GDSTG--DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENV 125
Query: 257 ASHLQKFRLYLKRL 270
ASHLQK+RLYLKR+
Sbjct: 126 ASHLQKYRLYLKRM 139
>gi|15238416|ref|NP_196128.1| myb family transcription factor [Arabidopsis thaliana]
gi|10178048|dbj|BAB11531.1| unnamed protein product [Arabidopsis thaliana]
gi|20260578|gb|AAM13187.1| unknown protein [Arabidopsis thaliana]
gi|30023728|gb|AAP13397.1| At5g05090 [Arabidopsis thaliana]
gi|332003444|gb|AED90827.1| myb family transcription factor [Arabidopsis thaliana]
Length = 266
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 47/74 (63%), Positives = 60/74 (81%), Gaps = 2/74 (2%)
Query: 197 GDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENV 256
GD G +E + T K+PR+VWTP+LH++FV AV LG+ AVPK I+ LM+V+GLTRENV
Sbjct: 68 GDSTG--DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENV 125
Query: 257 ASHLQKFRLYLKRL 270
ASHLQK+RLYLKR+
Sbjct: 126 ASHLQKYRLYLKRM 139
>gi|84570631|dbj|BAE72700.1| pseudo-response regulator 37 homologue [Lemna gibba]
Length = 623
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 77/127 (60%), Gaps = 4/127 (3%)
Query: 20 FPI-GMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVH 78
P+ ++VL V++D + V+ LR C YEVT + A K L NN D+V+++V
Sbjct: 72 LPVKSLKVLLVENDDSTRHVVNALLRNCSYEVTAVANGLEAWKFLENLSNNVDIVLTEVV 131
Query: 79 MPDMDGFKLLEHVGLEMDL---PVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNI 135
MP + G LL+ + M L PVIM+S++ +V K ++ GA D+L+KP+R ELKN+
Sbjct: 132 MPSLTGIGLLDKIMSHMTLKTIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRKNELKNL 191
Query: 136 WQHVIRR 142
WQHV RR
Sbjct: 192 WQHVWRR 198
>gi|226505594|ref|NP_001146641.1| uncharacterized protein LOC100280240 [Zea mays]
gi|219888151|gb|ACL54450.1| unknown [Zea mays]
gi|323388721|gb|ADX60165.1| PseuodARR-B transcription factor [Zea mays]
gi|413956104|gb|AFW88753.1| two-component response regulator-like PRR73 [Zea mays]
Length = 766
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 85/145 (58%), Gaps = 3/145 (2%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+RVL V++D + +V+ LR C YEV + A + L + +NN DLV+++V MP +
Sbjct: 83 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWRYLEDLQNNIDLVLTEVFMPCLS 142
Query: 84 GFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
G LL + + D+PVIM+S +V K ++ GA D+L+KP+R ELKN+WQHV
Sbjct: 143 GIGLLSKITSHKICKDIPVIMMSTNDSMSMVFKCLSKGAVDFLVKPLRKNELKNLWQHVW 202
Query: 141 RRKKVGPKDQNKLLNQENSRVGAGE 165
RR ++ + Q+ +++ G+
Sbjct: 203 RRCHSSSGSESGIQTQKCAKLNTGD 227
>gi|444434897|dbj|BAM77023.1| PHYTOCLOCK 1 [Triticum monococcum subsp. monococcum]
Length = 285
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/119 (47%), Positives = 73/119 (61%), Gaps = 8/119 (6%)
Query: 164 GEGGQGAMSTGNSDQN--GKSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPEL 221
G G G + G S + GK +D ++ + G E + K+ R+VWTP+L
Sbjct: 89 GNGHAGTHANGGSFPSFPGKGEAAGEDSGNRDNNSAESAG---EKAAATKRARLVWTPQL 145
Query: 222 HRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKR---LSNETPQA 277
H++FV V LG+ AVPK I+ LMNVEGLTRENVASHLQK+RLY+KR LSNE P A
Sbjct: 146 HKRFVEVVAHLGIKSAVPKTIMQLMNVEGLTRENVASHLQKYRLYVKRMQCLSNEGPSA 204
>gi|326523357|dbj|BAJ88719.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 274
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 71/111 (63%), Gaps = 4/111 (3%)
Query: 170 AMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAV 229
A +TG S + D + + + G ++ + T K+ R+VWTP+LH++FV V
Sbjct: 87 APATGGSFPSFPGKSSAAGDDNNNNSSAESAGEKSAAAAT-KRARLVWTPQLHKRFVEVV 145
Query: 230 NQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKR---LSNETPQA 277
LG+ AVPK I+ LMNVEGLTRENVASHLQK+RLY+KR LSNE P A
Sbjct: 146 AHLGIKSAVPKTIMQLMNVEGLTRENVASHLQKYRLYVKRMQGLSNEGPSA 196
>gi|444434895|dbj|BAM77022.1| PHYTOCLOCK 1 [Triticum monococcum subsp. aegilopoides]
Length = 285
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 57/119 (47%), Positives = 73/119 (61%), Gaps = 8/119 (6%)
Query: 164 GEGGQGAMSTGNSDQN--GKSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPEL 221
G G G + G S + GK +D ++ + G E + K+ R+VWTP+L
Sbjct: 89 GNGHAGTHANGGSFPSFPGKGAAAGEDSGNRDNNSAESAG---EKAAATKRARLVWTPQL 145
Query: 222 HRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKR---LSNETPQA 277
H++FV V LG+ AVPK I+ LMNVEGLTRENVASHLQK+RLY+KR LSNE P A
Sbjct: 146 HKRFVEVVAHLGIKSAVPKTIMQLMNVEGLTRENVASHLQKYRLYVKRMQGLSNEGPSA 204
>gi|147866630|emb|CAN81576.1| hypothetical protein VITISV_027774 [Vitis vinifera]
Length = 137
Score = 105 bits (261), Expect = 1e-19, Method: Composition-based stats.
Identities = 54/103 (52%), Positives = 71/103 (68%), Gaps = 4/103 (3%)
Query: 18 DKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDV 77
D+F G++VL VDDD T L++LE LR Y VT +QA AL +LRE ++ FD+V+SD
Sbjct: 34 DQFSTGLKVLVVDDDVTRLRILEQMLR---YHVTTCSQATIALNILREKKDCFDIVLSDA 90
Query: 78 HMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGAC 120
+P M +KLLEHVGLE DLP+IM+SA G T VM+ +H C
Sbjct: 91 RVPGMIDYKLLEHVGLETDLPIIMMSADGRTGAVMRD-SHSWC 132
>gi|312283289|dbj|BAJ34510.1| unnamed protein product [Thellungiella halophila]
Length = 270
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/123 (46%), Positives = 75/123 (60%), Gaps = 6/123 (4%)
Query: 200 DGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASH 259
D +E + T K+PR+VWTP+LH++FV AV LG+ AVPK I+ LM+V+GLTRENVASH
Sbjct: 72 DSAGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASH 131
Query: 260 LQKFRLYLKRLSNETPQAGMVAALGSKDSSYLRIGALDGFGDLRSLNSPGRLSSSAISSS 319
LQK+RLYLKR+ + G +G D + F L+ GR SS S
Sbjct: 132 LQKYRLYLKRMQSGG-GGGGGGNVGESDHLFASSPVPAHF-----LHPIGRQSSDHFMPS 185
Query: 320 YVP 322
+VP
Sbjct: 186 FVP 188
>gi|295913732|gb|ADG58105.1| transcription factor [Lycoris longituba]
Length = 230
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/76 (63%), Positives = 60/76 (78%), Gaps = 3/76 (3%)
Query: 203 ENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQK 262
E++ + K+PR+VWTP+LH++FV V LG+ AVPK I+ LMNVEGLTR+NVASHLQK
Sbjct: 116 EDQSARALKRPRLVWTPQLHKRFVEVVAHLGIKNAVPKTIVQLMNVEGLTRDNVASHLQK 175
Query: 263 FRLYLKR---LSNETP 275
+RLYLKR LSNE P
Sbjct: 176 YRLYLKRMSGLSNEGP 191
>gi|224144059|ref|XP_002336105.1| predicted protein [Populus trichocarpa]
gi|222872755|gb|EEF09886.1| predicted protein [Populus trichocarpa]
Length = 323
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 57/67 (85%)
Query: 204 NEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKF 263
+E + T K+PR+VWTP+LH++FV AV LG+ AVPK I+ LMNV+GLTRENVASHLQK+
Sbjct: 104 DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMNVDGLTRENVASHLQKY 163
Query: 264 RLYLKRL 270
RLYLKR+
Sbjct: 164 RLYLKRM 170
>gi|312282317|dbj|BAJ34024.1| unnamed protein product [Thellungiella halophila]
Length = 325
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 57/67 (85%)
Query: 204 NEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKF 263
+E + T K+PR+VWTP+LH++FV AV LG+ AVPK I+ LM+V+GLTRENVASHLQK+
Sbjct: 94 DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKY 153
Query: 264 RLYLKRL 270
RLYLKR+
Sbjct: 154 RLYLKRM 160
>gi|15228370|ref|NP_187687.1| myb family transcription factor [Arabidopsis thaliana]
gi|6630554|gb|AAF19573.1|AC011708_16 unknown protein [Arabidopsis thaliana]
gi|332641430|gb|AEE74951.1| myb family transcription factor [Arabidopsis thaliana]
Length = 335
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 57/67 (85%)
Query: 204 NEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKF 263
+E + T K+PR+VWTP+LH++FV AV LG+ AVPK I+ LM+V+GLTRENVASHLQK+
Sbjct: 97 DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKY 156
Query: 264 RLYLKRL 270
RLYLKR+
Sbjct: 157 RLYLKRM 163
>gi|297829626|ref|XP_002882695.1| hypothetical protein ARALYDRAFT_897268 [Arabidopsis lyrata subsp.
lyrata]
gi|297328535|gb|EFH58954.1| hypothetical protein ARALYDRAFT_897268 [Arabidopsis lyrata subsp.
lyrata]
Length = 334
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 57/67 (85%)
Query: 204 NEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKF 263
+E + T K+PR+VWTP+LH++FV AV LG+ AVPK I+ LM+V+GLTRENVASHLQK+
Sbjct: 93 DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKY 152
Query: 264 RLYLKRL 270
RLYLKR+
Sbjct: 153 RLYLKRM 159
>gi|258678906|dbj|BAI39993.1| pseudo-response regulator homolog protein [Physcomitrella patens
subsp. patens]
Length = 907
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 76/123 (61%), Gaps = 5/123 (4%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+R+L V+ D V+ LR C YEVT A +L + +NFDLV++DV MP +
Sbjct: 183 LRILLVEYDDATRHVVGALLRNCDYEVTAVANGSIAWGLLEDANSNFDLVLTDVVMPRLS 242
Query: 84 GFKLLEHVGLEMD----LPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + ++ + +P++++S+Y +V + ++ GACDYL+KPVR EL+N+WQHV
Sbjct: 243 GVGLLSKM-MKREACRRVPIVIMSSYDSLDIVFRCLSKGACDYLVKPVRKNELRNLWQHV 301
Query: 140 IRR 142
R+
Sbjct: 302 WRK 304
>gi|356502956|ref|XP_003520280.1| PREDICTED: two-component response regulator ARR14-like [Glycine
max]
Length = 260
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/96 (53%), Positives = 68/96 (70%), Gaps = 1/96 (1%)
Query: 200 DGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASH 259
D + E + T K+PR+VWTP+LH++FV AV LG+ AVPK I+ LM+V+GLTRENVASH
Sbjct: 71 DNIDEEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASH 130
Query: 260 LQKFRLYLKRLSNETPQAGMVAALGSKDSSYLRIGA 295
LQK+RLYLKR+ + G V + S D + R+ A
Sbjct: 131 LQKYRLYLKRMQGLS-AGGGVGRVASADPTTDRLFA 165
>gi|325910792|dbj|BAJ83826.1| circadian response regulator 1a [Physcomitrella patens subsp.
patens]
Length = 907
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 76/123 (61%), Gaps = 5/123 (4%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+R+L V+ D V+ LR C YEVT A +L + +NFDLV++DV MP +
Sbjct: 183 LRILLVEYDDATRHVVGALLRNCDYEVTAVANGSIAWGLLEDANSNFDLVLTDVVMPRLS 242
Query: 84 GFKLLEHVGLEMD----LPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + ++ + +P++++S+Y +V + ++ GACDYL+KPVR EL+N+WQHV
Sbjct: 243 GVGLLSKM-MKREACRRVPIVIMSSYDSLDIVFRCLSKGACDYLVKPVRKNELRNLWQHV 301
Query: 140 IRR 142
R+
Sbjct: 302 WRK 304
>gi|356542579|ref|XP_003539744.1| PREDICTED: LOW QUALITY PROTEIN: two-component response
regulator-like PRR37-like [Glycine max]
Length = 777
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 79/123 (64%), Gaps = 5/123 (4%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
++VL V+DD + V+ L+ C Y+VT + + A K+L + N DLV+++V MP +
Sbjct: 73 IKVLLVEDDDSTRHVVRALLQNCSYKVTAVSNGLQAWKVLEDPENGIDLVLTEVAMPILS 132
Query: 84 GF----KLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G K++ H L+ ++PVIM+S++ +V K ++ GA D+L+KP+R ELKN+WQHV
Sbjct: 133 GIGLLCKIMSHKTLK-NIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRRNELKNLWQHV 191
Query: 140 IRR 142
RR
Sbjct: 192 WRR 194
>gi|242060063|ref|XP_002459177.1| hypothetical protein SORBIDRAFT_03g047330 [Sorghum bicolor]
gi|241931152|gb|EES04297.1| hypothetical protein SORBIDRAFT_03g047330 [Sorghum bicolor]
Length = 284
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 56/68 (82%), Gaps = 3/68 (4%)
Query: 211 KKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKR- 269
K+PR+VWTP+LH++FV V LG+ AVPK I+ LMNVEGLTRENVASHLQK+RLY+KR
Sbjct: 142 KRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYVKRM 201
Query: 270 --LSNETP 275
LSNE P
Sbjct: 202 QGLSNEGP 209
>gi|168065344|ref|XP_001784613.1| circadian clock protein PRR1 [Physcomitrella patens subsp. patens]
gi|162663845|gb|EDQ50588.1| circadian clock protein PRR1 [Physcomitrella patens subsp. patens]
Length = 425
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 73/122 (59%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+R+L V+ D V+ LR C YEVT A +L + +NFDLV++DV MP +
Sbjct: 12 LRILLVEYDDATRHVVGALLRNCDYEVTAVANGSIAWGLLEDANSNFDLVLTDVVMPRLS 71
Query: 84 GFKLLEHVGLE---MDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
G LL + +P++++S+Y +V + ++ GACDYL+KPVR EL+N+WQHV
Sbjct: 72 GVGLLSKMMKREACRRVPIVIMSSYDSLDIVFRCLSKGACDYLVKPVRKNELRNLWQHVW 131
Query: 141 RR 142
R+
Sbjct: 132 RK 133
>gi|224089929|ref|XP_002308869.1| predicted protein [Populus trichocarpa]
gi|222854845|gb|EEE92392.1| predicted protein [Populus trichocarpa]
Length = 318
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/70 (64%), Positives = 57/70 (81%)
Query: 201 GHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHL 260
G ++ T K+PR+VWTP+LH++FV AV LG+ AVPK I+ LMNV+GLTRENVASHL
Sbjct: 103 GAAGDEPRTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMNVDGLTRENVASHL 162
Query: 261 QKFRLYLKRL 270
QK+RLYLKR+
Sbjct: 163 QKYRLYLKRM 172
>gi|449524812|ref|XP_004169415.1| PREDICTED: two-component response regulator-like APRR7-like
[Cucumis sativus]
Length = 794
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 102/195 (52%), Gaps = 7/195 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
++VL V++D + ++ LR C YEV + A KML + N+ DLV+++V MP +
Sbjct: 89 LKVLLVENDDSTRHLVTALLRNCSYEVIAAANGLHAWKMLEDLTNHIDLVLTEVVMPCLS 148
Query: 84 GFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
G LL + ++PVIM+S++ LV K ++ GA D+L+KP+R ELKN+WQHV
Sbjct: 149 GIGLLCKIMNHKTRKNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 208
Query: 141 RRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDD 200
RR ++ Q V + + +TG++D + N + G DG DD
Sbjct: 209 RRCHSSSGSGSESGTQTQKSVKSKSVEKSDNNTGSNDDEEEDN----ESIGFNIADGSDD 264
Query: 201 GHENEDSTTQKKPRV 215
G + S T++ V
Sbjct: 265 GSGTQSSWTKQAIEV 279
>gi|449532655|ref|XP_004173296.1| PREDICTED: uncharacterized protein LOC101223526, partial [Cucumis
sativus]
Length = 285
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 57/67 (85%)
Query: 204 NEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKF 263
+E + T K+PR+VWTP+LH++FV AV LG+ AVPK I+ LM+V+GLTRENVASHLQK+
Sbjct: 73 DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKY 132
Query: 264 RLYLKRL 270
RLYLKR+
Sbjct: 133 RLYLKRM 139
>gi|168009287|ref|XP_001757337.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691460|gb|EDQ77822.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 212
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 69/101 (68%), Gaps = 3/101 (2%)
Query: 180 GKSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVP 239
G ++ RK D + ++ G N + K+ R+VWTP+LH++FV AV LG+ AVP
Sbjct: 100 GSTDFGRKMADFELEDANSAGGLMNSNDEPLKRARLVWTPQLHKRFVEAVGHLGIKNAVP 159
Query: 240 KKILDLMNVEGLTRENVASHLQKFRLYLKR---LSNETPQA 277
K I+ LMNVEGLTRENVASHLQK+RLYLKR LSN+ P A
Sbjct: 160 KTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLSNDGPSA 200
>gi|449437694|ref|XP_004136626.1| PREDICTED: uncharacterized protein LOC101216059 [Cucumis sativus]
gi|449533272|ref|XP_004173600.1| PREDICTED: uncharacterized LOC101216059 [Cucumis sativus]
Length = 286
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/70 (64%), Positives = 58/70 (82%)
Query: 201 GHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHL 260
G +E + T K+PR+VWTP+LH++FV AV LG+ AVPK I+ LM+V+GLTRENVASHL
Sbjct: 78 GAGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHL 137
Query: 261 QKFRLYLKRL 270
QK+RLYLKR+
Sbjct: 138 QKYRLYLKRM 147
>gi|219887519|gb|ACL54134.1| unknown [Zea mays]
gi|413951205|gb|AFW83854.1| putative MYB DNA-binding domain superfamily protein [Zea mays]
Length = 195
Score = 103 bits (258), Expect = 2e-19, Method: Composition-based stats.
Identities = 47/87 (54%), Positives = 64/87 (73%), Gaps = 2/87 (2%)
Query: 191 GDEDEDGDDDGHENEDSTTQ--KKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNV 248
G ++ G + +TT ++PR+VWTP+LH++FV V LG+ KAVPK I++LMNV
Sbjct: 69 GHQEARGGEGADSAAATTTNSNRRPRLVWTPQLHKRFVDVVAHLGIKKAVPKTIMELMNV 128
Query: 249 EGLTRENVASHLQKFRLYLKRLSNETP 275
EGLTRENVASHLQK+RLY+KR+ + P
Sbjct: 129 EGLTRENVASHLQKYRLYVKRMRGQGP 155
>gi|357133685|ref|XP_003568454.1| PREDICTED: uncharacterized protein LOC100835635 [Brachypodium
distachyon]
Length = 326
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 57/67 (85%)
Query: 204 NEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKF 263
+E + T K+PR+VWTP+LH++FV AV LG+ AVPK I+ LM+V+GLTRENVASHLQK+
Sbjct: 89 DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKY 148
Query: 264 RLYLKRL 270
RLYLKR+
Sbjct: 149 RLYLKRM 155
>gi|281308390|gb|ADA58343.1| pseudo-response regulator 9 [Brassica rapa]
Length = 412
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 93/172 (54%), Gaps = 15/172 (8%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
++VL V+ D + +++ L+ C Y+V + + A + L+E N DL+++++ +P +
Sbjct: 26 LKVLLVESDDSTRQIITALLQKCSYKVVAVSDGLAAWETLKEKSNEIDLILTELDLPAIS 85
Query: 84 GFKLL----EHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
GF LL EH + ++PVIM+S+ +V+K + GA DYL+KP+R ELKN+WQHV
Sbjct: 86 GFALLALVMEHEACK-NIPVIMMSSEDSMTMVLKCMLKGAADYLIKPMRKNELKNLWQHV 144
Query: 140 IRRKKVG----------PKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGK 181
RR V P Q L + + + + G GA +T + N K
Sbjct: 145 WRRLAVRDGHNGHGLSLPASQQNLEDSDETSADHSDQGSGAQATTSCYGNNK 196
>gi|255552463|ref|XP_002517275.1| DNA binding protein, putative [Ricinus communis]
gi|223543538|gb|EEF45068.1| DNA binding protein, putative [Ricinus communis]
Length = 315
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/70 (64%), Positives = 58/70 (82%)
Query: 201 GHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHL 260
G +E + T K+PR+VWTP+LH++FV AV LG+ AVPK I+ LM+V+GLTRENVASHL
Sbjct: 93 GAGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHL 152
Query: 261 QKFRLYLKRL 270
QK+RLYLKR+
Sbjct: 153 QKYRLYLKRM 162
>gi|413951204|gb|AFW83853.1| putative MYB DNA-binding domain superfamily protein [Zea mays]
Length = 219
Score = 103 bits (258), Expect = 2e-19, Method: Composition-based stats.
Identities = 47/87 (54%), Positives = 64/87 (73%), Gaps = 2/87 (2%)
Query: 191 GDEDEDGDDDGHENEDSTTQ--KKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNV 248
G ++ G + +TT ++PR+VWTP+LH++FV V LG+ KAVPK I++LMNV
Sbjct: 93 GHQEARGGEGADSAAATTTNSNRRPRLVWTPQLHKRFVDVVAHLGIKKAVPKTIMELMNV 152
Query: 249 EGLTRENVASHLQKFRLYLKRLSNETP 275
EGLTRENVASHLQK+RLY+KR+ + P
Sbjct: 153 EGLTRENVASHLQKYRLYVKRMRGQGP 179
>gi|226531730|ref|NP_001147359.1| ARR1 protein-like [Zea mays]
gi|195610500|gb|ACG27080.1| ARR1 protein-like [Zea mays]
Length = 219
Score = 103 bits (258), Expect = 2e-19, Method: Composition-based stats.
Identities = 47/87 (54%), Positives = 64/87 (73%), Gaps = 2/87 (2%)
Query: 191 GDEDEDGDDDGHENEDSTTQ--KKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNV 248
G ++ G + +TT ++PR+VWTP+LH++FV V LG+ KAVPK I++LMNV
Sbjct: 93 GHQEARGGEGADSAAATTTNSNRRPRLVWTPQLHKRFVDVVAHLGIKKAVPKTIIELMNV 152
Query: 249 EGLTRENVASHLQKFRLYLKRLSNETP 275
EGLTRENVASHLQK+RLY+KR+ + P
Sbjct: 153 EGLTRENVASHLQKYRLYVKRMRGQGP 179
>gi|226497556|ref|NP_001141486.1| uncharacterized protein LOC100273598 [Zea mays]
gi|194704770|gb|ACF86469.1| unknown [Zea mays]
gi|414886440|tpg|DAA62454.1| TPA: hypothetical protein ZEAMMB73_402220 [Zea mays]
Length = 629
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 80/135 (59%), Gaps = 7/135 (5%)
Query: 13 EDGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDL 72
E G + + P+ RVL + D + V+ LR C Y V + V A +L+E N DL
Sbjct: 34 EMGMLPRMPV--RVLLAEGDDSTRHVISALLRKCGYRVAAASDGVKAWDLLKEKSFNVDL 91
Query: 73 VISDVHMPDMDGFKLLEHVGLEMD----LPVIMLSAYGDTKLVMKGITHGACDYLLKPVR 128
V+++V +P M GF LL + +E D +PVIM+S++ +V K + GA D+L+KP+R
Sbjct: 92 VLTEVELPLMSGFLLLSTI-MEHDASKNIPVIMMSSHDSVSMVFKCMLKGAADFLVKPIR 150
Query: 129 IEELKNIWQHVIRRK 143
EL+N+WQHV R++
Sbjct: 151 KNELRNLWQHVWRKQ 165
>gi|115463879|ref|NP_001055539.1| Os05g0412000 [Oryza sativa Japonica Group]
gi|50878489|gb|AAT85262.1| hypothetical protein [Oryza sativa Japonica Group]
gi|51038221|gb|AAT94024.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113579090|dbj|BAF17453.1| Os05g0412000 [Oryza sativa Japonica Group]
gi|125552332|gb|EAY98041.1| hypothetical protein OsI_19956 [Oryza sativa Indica Group]
gi|222631588|gb|EEE63720.1| hypothetical protein OsJ_18538 [Oryza sativa Japonica Group]
Length = 331
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 57/67 (85%)
Query: 204 NEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKF 263
+E + T K+PR+VWTP+LH++FV AV LG+ AVPK I+ LM+V+GLTRENVASHLQK+
Sbjct: 102 DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKY 161
Query: 264 RLYLKRL 270
RLYLKR+
Sbjct: 162 RLYLKRM 168
>gi|15226794|ref|NP_181630.1| myb family transcription factor [Arabidopsis thaliana]
gi|2623311|gb|AAB86457.1| unknown protein [Arabidopsis thaliana]
gi|18252893|gb|AAL62373.1| unknown protein [Arabidopsis thaliana]
gi|20197124|gb|AAM14927.1| unknown protein [Arabidopsis thaliana]
gi|23197780|gb|AAN15417.1| unknown protein [Arabidopsis thaliana]
gi|330254814|gb|AEC09908.1| myb family transcription factor [Arabidopsis thaliana]
Length = 248
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 56/66 (84%)
Query: 205 EDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFR 264
E + T K+PR+VWTP+LH++FV AV LG+ AVPK I+ LM+VEGLTRENVASHLQK+R
Sbjct: 98 EPARTLKRPRLVWTPQLHKRFVDAVGHLGIKNAVPKTIMQLMSVEGLTRENVASHLQKYR 157
Query: 265 LYLKRL 270
LYL+R+
Sbjct: 158 LYLRRM 163
>gi|77548762|gb|ABA91559.1| CCT motif family protein, expressed [Oryza sativa Japonica Group]
Length = 699
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 96/196 (48%), Gaps = 17/196 (8%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+RVL V+ D + +V+ LR C Y V + A ++RE FDLV+++V MP +
Sbjct: 44 LRVLLVEHDDSTRQVVTALLRKCGYRVAAVADGMKAWGVMRERAYAFDLVLTEVTMPTLS 103
Query: 84 GFKLLEHVGLE---MDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
G +LL + ++PVIM+S+ V++ + GA D+L+KPVR EL+N+WQHV
Sbjct: 104 GIELLSRIVASDECKNIPVIMMSSQDSIGTVLRCMQKGAVDFLVKPVRKNELRNLWQHVW 163
Query: 141 RRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDD 200
RR + NS+ A E + + NG + D++ D G
Sbjct: 164 RRHAM------------NSQTNASENNAASNHLSANGGNGSKTGEHSDEESDAQSSGSK- 210
Query: 201 GHENEDSTTQKKPRVV 216
E E + +K P VV
Sbjct: 211 -REVEIQSAEKLPEVV 225
>gi|356520227|ref|XP_003528765.1| PREDICTED: two-component response regulator-like PRR95-like isoform
2 [Glycine max]
Length = 722
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 90/164 (54%), Gaps = 5/164 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+RVL V+ D + +++ LR C Y V + A + L++ DL++++V +P +
Sbjct: 29 LRVLLVEADHSTRQIIAALLRKCSYTVIAVPDGLKAWETLKKKAPELDLILTEVELPAIS 88
Query: 84 GFKLLEHVGLEMDL----PVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
GF LL + +E D+ PVIM+S++ + +K + GA D+L+KP+R EL+N+WQHV
Sbjct: 89 GFALLSLI-MEHDICKNIPVIMMSSHDSVSMALKCMLKGAVDFLIKPIRKNELRNLWQHV 147
Query: 140 IRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSN 183
RR + QN + + + + + S+G+ + K+N
Sbjct: 148 WRRHAISTPTQNTTFSPKKLKTASEDNSASNKSSGSVASSKKNN 191
>gi|384246881|gb|EIE20369.1| CheY-like protein, partial [Coccomyxa subellipsoidea C-169]
Length = 129
Score = 103 bits (258), Expect = 3e-19, Method: Composition-based stats.
Identities = 58/128 (45%), Positives = 83/128 (64%), Gaps = 4/128 (3%)
Query: 21 PIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLR-ENRNNFDLVISDVHM 79
P + +L VDD+ V+ N LR C Y+VT + AL++LR + F L+++DV M
Sbjct: 2 PNDVHILLVDDERLSRVVVGNLLRKCSYKVTEAGSGMEALEILRGQPPGTFSLILTDVMM 61
Query: 80 PDMDGFKLLEHV-GLEM--DLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIW 136
PD+DG +LL HV G E +LPVIM+SA T+ V + I GA DYLLKPV +E++++W
Sbjct: 62 PDVDGIELLRHVRGDEAWSNLPVIMMSANERTETVFECIRGGAEDYLLKPVTKKEVQHMW 121
Query: 137 QHVIRRKK 144
QHV RR++
Sbjct: 122 QHVWRRQQ 129
>gi|356520225|ref|XP_003528764.1| PREDICTED: two-component response regulator-like PRR95-like isoform
1 [Glycine max]
Length = 703
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 90/164 (54%), Gaps = 5/164 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+RVL V+ D + +++ LR C Y V + A + L++ DL++++V +P +
Sbjct: 29 LRVLLVEADHSTRQIIAALLRKCSYTVIAVPDGLKAWETLKKKAPELDLILTEVELPAIS 88
Query: 84 GFKLLEHVGLEMDL----PVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
GF LL + +E D+ PVIM+S++ + +K + GA D+L+KP+R EL+N+WQHV
Sbjct: 89 GFALLSLI-MEHDICKNIPVIMMSSHDSVSMALKCMLKGAVDFLIKPIRKNELRNLWQHV 147
Query: 140 IRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSN 183
RR + QN + + + + + S+G+ + K+N
Sbjct: 148 WRRHAISTPTQNTTFSPKKLKTASEDNSASNKSSGSVASSKKNN 191
>gi|326512880|dbj|BAK03347.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 305
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 56/67 (83%)
Query: 204 NEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKF 263
E + T K+PR+VWTP+LH++FV AV LG+ AVPK I+ LM+V+GLTRENVASHLQK+
Sbjct: 82 EEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKY 141
Query: 264 RLYLKRL 270
RLYLKR+
Sbjct: 142 RLYLKRM 148
>gi|147820325|emb|CAN73573.1| hypothetical protein VITISV_007446 [Vitis vinifera]
Length = 306
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 57/67 (85%)
Query: 204 NEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKF 263
+E + T K+PR+VWTP+LH++FV AV LG+ AVPK I+ LM+V+GLTRENVASHLQK+
Sbjct: 84 DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKY 143
Query: 264 RLYLKRL 270
RLYLKR+
Sbjct: 144 RLYLKRM 150
>gi|410718344|gb|AFV79548.1| pseudo response regulator 1 [Pinus pinaster]
Length = 565
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 80/132 (60%), Gaps = 4/132 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+R+L D DPT + L LR C Y+VT + A + +L DL++++V +P
Sbjct: 21 VRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTEGREIDLILAEVDLPKSK 80
Query: 84 GFKLLEHVGLEMDL---PVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
GFK+L+++ L P++M+SA + +VMK + GA DYL+KP+RI EL N+W H+
Sbjct: 81 GFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELLNLWMHMW 140
Query: 141 RRKK-VGPKDQN 151
RR++ +G D+N
Sbjct: 141 RRRRMLGLADKN 152
>gi|410716788|gb|AFV78770.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716832|gb|AFV78792.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 80/132 (60%), Gaps = 4/132 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+R+L D DPT + L LR C Y+VT + A + +L DL++++V +P
Sbjct: 21 VRILLCDKDPTNSQKLLELLRKCSYQVTAVSTAREVVSVLNTEGREIDLILAEVDLPKSK 80
Query: 84 GFKLLEHVGLEMDL---PVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
GFK+L+++ L P++M+SA + +VMK + GA DYL+KP+RI EL N+W H+
Sbjct: 81 GFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELLNLWMHMW 140
Query: 141 RRKK-VGPKDQN 151
RR++ +G D+N
Sbjct: 141 RRRRMLGLADKN 152
>gi|410716730|gb|AFV78741.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 80/132 (60%), Gaps = 4/132 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+R+L D DPT + L LR C Y+VT + A + +L DL++++V +P
Sbjct: 21 VRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTEGREIDLILAEVDLPKSK 80
Query: 84 GFKLLEHVGLEMDL---PVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
GFK+L+++ L P++M+SA + +VMK + GA DYL+KP+RI EL N+W H+
Sbjct: 81 GFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELLNLWMHMW 140
Query: 141 RRKK-VGPKDQN 151
RR++ +G D+N
Sbjct: 141 RRRRMLGLADKN 152
>gi|410716910|gb|AFV78831.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 80/132 (60%), Gaps = 4/132 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+R+L D DPT + L LR C Y+VT + A + +L DL++++V +P
Sbjct: 21 VRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTEGREIDLILAEVDLPKSK 80
Query: 84 GFKLLEHVGLEMDL---PVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
GFK+L+++ L P++M+SA + +VMK + GA DYL+KP+RI EL N+W H+
Sbjct: 81 GFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELLNLWMHMW 140
Query: 141 RRKK-VGPKDQN 151
RR++ +G D+N
Sbjct: 141 RRRRMLGLADKN 152
>gi|410716904|gb|AFV78828.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 80/132 (60%), Gaps = 4/132 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+R+L D DPT + L LR C Y+VT + A + +L DL++++V +P
Sbjct: 21 VRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTEGREIDLILAEVDLPKSK 80
Query: 84 GFKLLEHVGLEMDL---PVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
GFK+L+++ L P++M+SA + +VMK + GA DYL+KP+RI EL N+W H+
Sbjct: 81 GFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELLNLWMHMW 140
Query: 141 RRKK-VGPKDQN 151
RR++ +G D+N
Sbjct: 141 RRRRMLGLADKN 152
>gi|410716834|gb|AFV78793.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716890|gb|AFV78821.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 80/132 (60%), Gaps = 4/132 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+R+L D DPT + L LR C Y+VT + A + +L DL++++V +P
Sbjct: 21 VRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTEGREIDLILAEVDLPKSK 80
Query: 84 GFKLLEHVGLEMDL---PVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
GFK+L+++ L P++M+SA + +VMK + GA DYL+KP+RI EL N+W H+
Sbjct: 81 GFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELLNLWMHMW 140
Query: 141 RRKK-VGPKDQN 151
RR++ +G D+N
Sbjct: 141 RRRRMLGLADKN 152
>gi|410716774|gb|AFV78763.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716780|gb|AFV78766.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716802|gb|AFV78777.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716814|gb|AFV78783.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716864|gb|AFV78808.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716874|gb|AFV78813.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716918|gb|AFV78835.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 80/132 (60%), Gaps = 4/132 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+R+L D DPT + L LR C Y+VT + A + +L DL++++V +P
Sbjct: 21 VRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTEGREIDLILAEVDLPKSK 80
Query: 84 GFKLLEHVGLEMDL---PVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
GFK+L+++ L P++M+SA + +VMK + GA DYL+KP+RI EL N+W H+
Sbjct: 81 GFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELLNLWMHMW 140
Query: 141 RRKK-VGPKDQN 151
RR++ +G D+N
Sbjct: 141 RRRRMLGLADKN 152
>gi|410716750|gb|AFV78751.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716798|gb|AFV78775.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716942|gb|AFV78847.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716946|gb|AFV78849.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716952|gb|AFV78852.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716956|gb|AFV78854.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716958|gb|AFV78855.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 80/132 (60%), Gaps = 4/132 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+R+L D DPT + L LR C Y+VT + A + +L DL++++V +P
Sbjct: 21 VRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTEGREIDLILAEVDLPKSK 80
Query: 84 GFKLLEHVGLEMDL---PVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
GFK+L+++ L P++M+SA + +VMK + GA DYL+KP+RI EL N+W H+
Sbjct: 81 GFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELLNLWMHMW 140
Query: 141 RRKK-VGPKDQN 151
RR++ +G D+N
Sbjct: 141 RRRRMLGLADKN 152
>gi|410716738|gb|AFV78745.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716742|gb|AFV78747.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716744|gb|AFV78748.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716752|gb|AFV78752.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716756|gb|AFV78754.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716768|gb|AFV78760.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716772|gb|AFV78762.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716776|gb|AFV78764.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716784|gb|AFV78768.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716808|gb|AFV78780.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716810|gb|AFV78781.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716828|gb|AFV78790.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 80/132 (60%), Gaps = 4/132 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+R+L D DPT + L LR C Y+VT + A + +L DL++++V +P
Sbjct: 21 VRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTEGREIDLILAEVDLPKSK 80
Query: 84 GFKLLEHVGLEMDL---PVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
GFK+L+++ L P++M+SA + +VMK + GA DYL+KP+RI EL N+W H+
Sbjct: 81 GFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELLNLWMHMW 140
Query: 141 RRKK-VGPKDQN 151
RR++ +G D+N
Sbjct: 141 RRRRMLGLADKN 152
>gi|449453151|ref|XP_004144322.1| PREDICTED: uncharacterized protein LOC101216969 [Cucumis sativus]
Length = 301
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 57/67 (85%)
Query: 204 NEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKF 263
+E + T K+PR+VWTP+LH++FV AV LG+ AVPK I+ LM+V+GLTRENVASHLQK+
Sbjct: 89 DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKY 148
Query: 264 RLYLKRL 270
RLYLKR+
Sbjct: 149 RLYLKRM 155
>gi|410716728|gb|AFV78740.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716732|gb|AFV78742.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716734|gb|AFV78743.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716736|gb|AFV78744.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716740|gb|AFV78746.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716746|gb|AFV78749.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716748|gb|AFV78750.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716754|gb|AFV78753.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716758|gb|AFV78755.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716760|gb|AFV78756.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716762|gb|AFV78757.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716764|gb|AFV78758.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716766|gb|AFV78759.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716770|gb|AFV78761.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716782|gb|AFV78767.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716786|gb|AFV78769.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716790|gb|AFV78771.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716792|gb|AFV78772.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716794|gb|AFV78773.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716796|gb|AFV78774.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716800|gb|AFV78776.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716804|gb|AFV78778.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716806|gb|AFV78779.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716812|gb|AFV78782.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716816|gb|AFV78784.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716818|gb|AFV78785.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716820|gb|AFV78786.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716822|gb|AFV78787.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716826|gb|AFV78789.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716830|gb|AFV78791.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716836|gb|AFV78794.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716838|gb|AFV78795.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716840|gb|AFV78796.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716842|gb|AFV78797.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716844|gb|AFV78798.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716846|gb|AFV78799.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716848|gb|AFV78800.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716850|gb|AFV78801.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716852|gb|AFV78802.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716854|gb|AFV78803.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716856|gb|AFV78804.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716858|gb|AFV78805.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716860|gb|AFV78806.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716866|gb|AFV78809.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716868|gb|AFV78810.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716870|gb|AFV78811.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716872|gb|AFV78812.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716878|gb|AFV78815.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716880|gb|AFV78816.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716882|gb|AFV78817.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716884|gb|AFV78818.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716886|gb|AFV78819.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716888|gb|AFV78820.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716892|gb|AFV78822.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716894|gb|AFV78823.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716896|gb|AFV78824.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716900|gb|AFV78826.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716902|gb|AFV78827.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716906|gb|AFV78829.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716912|gb|AFV78832.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716914|gb|AFV78833.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716916|gb|AFV78834.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716920|gb|AFV78836.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716922|gb|AFV78837.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716924|gb|AFV78838.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716926|gb|AFV78839.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716928|gb|AFV78840.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716930|gb|AFV78841.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716932|gb|AFV78842.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716934|gb|AFV78843.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716936|gb|AFV78844.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716938|gb|AFV78845.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716940|gb|AFV78846.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716944|gb|AFV78848.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716948|gb|AFV78850.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716950|gb|AFV78851.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716954|gb|AFV78853.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 80/132 (60%), Gaps = 4/132 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+R+L D DPT + L LR C Y+VT + A + +L DL++++V +P
Sbjct: 21 VRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTEGREIDLILAEVDLPKSK 80
Query: 84 GFKLLEHVGLEMDL---PVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
GFK+L+++ L P++M+SA + +VMK + GA DYL+KP+RI EL N+W H+
Sbjct: 81 GFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELLNLWMHMW 140
Query: 141 RRKK-VGPKDQN 151
RR++ +G D+N
Sbjct: 141 RRRRMLGLADKN 152
>gi|410716908|gb|AFV78830.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 80/132 (60%), Gaps = 4/132 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+R+L D DPT + L LR C Y+VT + A + +L DL++++V +P
Sbjct: 21 VRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTEGREIDLILAEVDLPKSK 80
Query: 84 GFKLLEHVGLEMDL---PVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
GFK+L+++ L P++M+SA + +VMK + GA DYL+KP+RI EL N+W H+
Sbjct: 81 GFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELLNLWMHMW 140
Query: 141 RRKK-VGPKDQN 151
RR++ +G D+N
Sbjct: 141 RRRRMLGLADKN 152
>gi|238011812|gb|ACR36941.1| unknown [Zea mays]
gi|408690380|gb|AFU81650.1| G2-like transcription factor, partial [Zea mays subsp. mays]
gi|413945355|gb|AFW78004.1| putative MYB DNA-binding domain superfamily protein [Zea mays]
Length = 312
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 57/67 (85%)
Query: 204 NEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKF 263
+E + T K+PR+VWTP+LH++FV AV LG+ AVPK I+ LM+V+GLTRENVASHLQK+
Sbjct: 88 DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKY 147
Query: 264 RLYLKRL 270
RLYLKR+
Sbjct: 148 RLYLKRM 154
>gi|71067060|dbj|BAE16282.1| StPCL1 [Solanum tuberosum]
Length = 314
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 68/95 (71%), Gaps = 4/95 (4%)
Query: 185 KRKDQDGDEDEDG---DDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKK 241
+R + G E+ D +++ ++ + T K+PR+VWTP+LH++F+ V LG+ AVPK
Sbjct: 120 RRVESGGTEEADSSLCNENFADDSSAKTPKRPRLVWTPQLHKRFIEVVAHLGIKGAVPKT 179
Query: 242 ILDLMNVEGLTRENVASHLQKFRLYLKRLS-NETP 275
I+ LMNVEGLTRENVASHLQK+RLY KR+ NE P
Sbjct: 180 IMQLMNVEGLTRENVASHLQKYRLYTKRMQPNEGP 214
>gi|281308386|gb|ADA58341.1| pseudo-response regulator 5a [Brassica rapa]
Length = 497
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 77/127 (60%), Gaps = 5/127 (3%)
Query: 22 IGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPD 81
I +RVL V+ D + +++ LR C Y V + A +ML+ N + DL++++V +P
Sbjct: 53 IALRVLLVEADDSTRQIISALLRKCSYRVAAVPDGLKAWEMLKGNPESVDLILAEVDLPS 112
Query: 82 MDGFKLLEHVGLEMD----LPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQ 137
+ G+ LL + +E D +PVIM+S + V K + GA DYL+KP+R EL+N+WQ
Sbjct: 113 ISGYALLTLI-MEHDVCKNIPVIMMSTHDSVNTVYKCMLKGAADYLVKPLRRNELRNLWQ 171
Query: 138 HVIRRKK 144
HV RR++
Sbjct: 172 HVWRRRQ 178
>gi|410716876|gb|AFV78814.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716898|gb|AFV78825.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 80/132 (60%), Gaps = 4/132 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+R+L D DPT + L LR C Y+VT + A + +L DL++++V +P
Sbjct: 21 VRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTEGREIDLILAEVDLPKSK 80
Query: 84 GFKLLEHVGLEMDL---PVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
GFK+L+++ L P++M+SA + +VMK + GA DYL+KP+RI EL N+W H+
Sbjct: 81 GFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELLNLWMHMW 140
Query: 141 RRKK-VGPKDQN 151
RR++ +G D+N
Sbjct: 141 RRRRMLGLADKN 152
>gi|410716824|gb|AFV78788.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 80/132 (60%), Gaps = 4/132 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+R+L D DPT + L LR C Y+VT + A + +L DL++++V +P
Sbjct: 21 VRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTEGREIDLILAEVDLPKSK 80
Query: 84 GFKLLEHVGLEMDL---PVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
GFK+L+++ L P++M+SA + +VMK + GA DYL+KP+RI EL N+W H+
Sbjct: 81 GFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELLNLWMHMW 140
Query: 141 RRKK-VGPKDQN 151
RR++ +G D+N
Sbjct: 141 RRRRMLGLADKN 152
>gi|356504655|ref|XP_003521111.1| PREDICTED: uncharacterized protein LOC100815363 [Glycine max]
Length = 312
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 56/66 (84%)
Query: 205 EDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFR 264
E + T K+PR+VWTP+LH++FV AV LG+ AVPK I+ LM+V+GLTRENVASHLQK+R
Sbjct: 104 EPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYR 163
Query: 265 LYLKRL 270
LYLKR+
Sbjct: 164 LYLKRM 169
>gi|410716778|gb|AFV78765.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716862|gb|AFV78807.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 80/132 (60%), Gaps = 4/132 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+R+L D DPT + L LR C Y+VT + A + +L DL++++V +P
Sbjct: 21 VRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLNTEGREIDLILAEVDLPKSK 80
Query: 84 GFKLLEHVGLEMDL---PVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
GFK+L+++ L P++M+SA + +VMK + GA DYL+KP+RI EL N+W H+
Sbjct: 81 GFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAADYLVKPLRINELLNLWMHMW 140
Query: 141 RRKK-VGPKDQN 151
RR++ +G D+N
Sbjct: 141 RRRRMLGLADKN 152
>gi|255566892|ref|XP_002524429.1| conserved hypothetical protein [Ricinus communis]
gi|223536313|gb|EEF37964.1| conserved hypothetical protein [Ricinus communis]
Length = 667
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 96/180 (53%), Gaps = 11/180 (6%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+RVL V+ D + +++ LR C Y+V + A +ML+ +N DL++++V +P +
Sbjct: 44 LRVLLVEADDSTRQIIAALLRKCSYKVAAVPDGLKAWEMLKGKPHNIDLILTEVELPSIS 103
Query: 84 GFKLL----EHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G+ LL EH + ++PVIM+S+ V K + GA DYL+KP+R EL+N+WQHV
Sbjct: 104 GYALLTLIMEH-EICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPIRKNELRNLWQHV 162
Query: 140 IRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDD 199
RR+ ++ QE S G+ A S N + N S + Q+ + E G D
Sbjct: 163 WRRQSSLAREN---CPQEES---VGQDTAEATSENNPESNHSSGDVARLQNNKDFEKGSD 216
>gi|226499102|ref|NP_001151536.1| two-component response regulator-like PRR95 [Zea mays]
gi|195647486|gb|ACG43211.1| two-component response regulator-like PRR95 [Zea mays]
Length = 630
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 99/183 (54%), Gaps = 13/183 (7%)
Query: 17 IDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISD 76
+ + P+ RVL + D + V+ LR C Y V + V A +L+E N DLV+++
Sbjct: 39 LPRMPV--RVLLAEGDDSTRHVISALLRKCGYRVAAASDGVKAWDILKEKSFNIDLVLTE 96
Query: 77 VHMPDMDGFKLLEHVGLEMD----LPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEEL 132
V +P M GF LL + +E D +PVIM+S++ +V K + GA D+L+KP+R EL
Sbjct: 97 VELPLMSGFLLLSTI-MEHDASKNIPVIMMSSHDSVSMVFKCMLKGAADFLVKPLRKNEL 155
Query: 133 KNIWQHVIRRKKV--GPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNG-KSNRKRKDQ 189
+N+WQHV R++ GP Q+ QE + E G N + +G + NR+ +Q
Sbjct: 156 RNLWQHVWRKQLANGGPDVQHI---QEENLAERMEQKTGVTKADNLNSDGPRKNRECSEQ 212
Query: 190 DGD 192
+ D
Sbjct: 213 ESD 215
>gi|225440143|ref|XP_002283226.1| PREDICTED: uncharacterized protein LOC100256764 isoform 1 [Vitis
vinifera]
gi|359481436|ref|XP_003632618.1| PREDICTED: uncharacterized protein LOC100256764 isoform 2 [Vitis
vinifera]
Length = 306
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 57/67 (85%)
Query: 204 NEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKF 263
+E + T K+PR+VWTP+LH++FV AV LG+ AVPK I+ LM+V+GLTRENVASHLQK+
Sbjct: 84 DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKY 143
Query: 264 RLYLKRL 270
RLYLKR+
Sbjct: 144 RLYLKRM 150
>gi|312283015|dbj|BAJ34373.1| unnamed protein product [Thellungiella halophila]
Length = 486
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 78/123 (63%), Gaps = 5/123 (4%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+RVL V+ D + +++ LR C Y+V + + A + L+E ++ DL+++++ +P +
Sbjct: 41 LRVLLVESDDSTRQIITALLRKCYYKVVAVSDGLAAWETLKEKSHSIDLILTELDLPSIS 100
Query: 84 GFKLLEHVGLE----MDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
GF LL V +E ++PVIM+S+ LV+K + GA DYL+KP+R ELKN+WQHV
Sbjct: 101 GFALLALV-MENEACKNIPVIMMSSQDSITLVLKCMLRGAADYLIKPMRKNELKNLWQHV 159
Query: 140 IRR 142
RR
Sbjct: 160 WRR 162
>gi|355469070|gb|ACU42265.2| pseudo response regulator 59 [Pisum sativum]
Length = 494
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 90/171 (52%), Gaps = 18/171 (10%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+RVL V+ D +++ LR C Y+V + A ++L+ NFDL++++V +P +
Sbjct: 45 LRVLLVEADDCTRQIITALLRKCNYKVAAVADGLKAWEILKGRPRNFDLILTEVDLPSVS 104
Query: 84 GFKLLEHVGLEMD----LPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G+ LL + +E D +PVIM+S+ V K + GA DYL+KP+RI EL+N+WQHV
Sbjct: 105 GYALLSLI-MEHDTCKTIPVIMMSSQDSVSTVYKCMLRGAADYLVKPIRINELRNLWQHV 163
Query: 140 IRRKKV--------GPKDQNKLLNQ-----ENSRVGAGEGGQGAMSTGNSD 177
RR+ GP+D+ L + EN+ G A N D
Sbjct: 164 WRRQSQSTATAGINGPQDEIDALQKVEATAENNAASNRSSGDAACIQRNKD 214
>gi|297827739|ref|XP_002881752.1| myb family transcription factor [Arabidopsis lyrata subsp. lyrata]
gi|297327591|gb|EFH58011.1| myb family transcription factor [Arabidopsis lyrata subsp. lyrata]
Length = 249
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 56/66 (84%)
Query: 205 EDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFR 264
E + T K+PR+VWTP+LH++FV AV LG+ AVPK I+ LM+VEGLTRENVASHLQK+R
Sbjct: 97 EPARTLKRPRLVWTPQLHKRFVDAVGHLGIKNAVPKTIMQLMSVEGLTRENVASHLQKYR 156
Query: 265 LYLKRL 270
LYL+R+
Sbjct: 157 LYLRRM 162
>gi|255928918|gb|ACU42266.1| pseudo response regulator 59 [Pisum sativum]
Length = 469
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 90/171 (52%), Gaps = 18/171 (10%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+RVL V+ D +++ LR C Y+V + A ++L+ NFDL++++V +P +
Sbjct: 20 LRVLLVEADDCTRQIITALLRKCNYKVAAVADGLKAWEILKGRPRNFDLILTEVDLPSVS 79
Query: 84 GFKLLEHVGLEMD----LPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G+ LL + +E D +PVIM+S+ V K + GA DYL+KP+RI EL+N+WQHV
Sbjct: 80 GYALLSLI-MEHDTCKTIPVIMMSSQDSVSTVYKCMLRGAADYLVKPIRINELRNLWQHV 138
Query: 140 IRRKKV--------GPKDQNKLLNQ-----ENSRVGAGEGGQGAMSTGNSD 177
RR+ GP+D+ L + EN+ G A N D
Sbjct: 139 WRRQSQSTATAGINGPQDEIDALQKVEATAENNAASNRSSGDAACIQRNKD 189
>gi|296089013|emb|CBI38716.3| unnamed protein product [Vitis vinifera]
Length = 593
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 77/123 (62%), Gaps = 5/123 (4%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+RVL V+ D + +++ LR C Y+V + + A + L+ N DL++++V +P +
Sbjct: 3 LRVLLVEPDDSTRQIIAALLRKCSYKVAAVSDGLKAWEALKGEPQNVDLILTEVELPSIS 62
Query: 84 GFKLLEHVGLEMDL----PVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
GF LL + +E D+ PVIM+S++ +V+K + GA D+L+KPVR EL+N+WQHV
Sbjct: 63 GFALLSLI-MEDDICKKIPVIMMSSHDSISMVLKCMLKGAADFLVKPVRKNELRNLWQHV 121
Query: 140 IRR 142
RR
Sbjct: 122 WRR 124
>gi|255548045|ref|XP_002515079.1| sensory transduction histidine kinase, putative [Ricinus communis]
gi|223545559|gb|EEF47063.1| sensory transduction histidine kinase, putative [Ricinus communis]
Length = 697
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 78/126 (61%), Gaps = 5/126 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+RVL V+ D + +++ LR C Y V + A + L++ NN DL++++V +P +
Sbjct: 41 LRVLLVEADYSTRQIISALLRKCSYRVAAVPDGLMAWETLKDGPNNIDLILTEVDLPLIS 100
Query: 84 GFKLLEHVGLEMD----LPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G+ LL V +E D +PVIM+S++ V+K + GA D+L+KPVR ELKN+WQHV
Sbjct: 101 GYALLTLV-MEHDFCKNIPVIMMSSHDSISKVLKCMLKGAADFLIKPVRRNELKNLWQHV 159
Query: 140 IRRKKV 145
RR+ +
Sbjct: 160 WRRQTL 165
>gi|224059460|ref|XP_002299857.1| predicted protein [Populus trichocarpa]
gi|222847115|gb|EEE84662.1| predicted protein [Populus trichocarpa]
Length = 186
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/105 (51%), Positives = 68/105 (64%), Gaps = 3/105 (2%)
Query: 176 SDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVD 235
S N KS + + D + D + + T K+PR+VWTP+LH++FV V LG+
Sbjct: 66 SSNNFKSFNETTEADSALRTENWVDDPSSAAARTLKRPRLVWTPQLHKRFVDVVGHLGMK 125
Query: 236 KAVPKKILDLMNVEGLTRENVASHLQKFRLYLKR---LSNETPQA 277
AVPK I+ MNVEGLTRENVASHLQK+RLYLKR LS+E P A
Sbjct: 126 NAVPKTIMQWMNVEGLTRENVASHLQKYRLYLKRKQGLSSEGPSA 170
>gi|157399682|gb|ABV53465.1| pseudo-response regulator 9 [Castanea sativa]
Length = 700
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 79/128 (61%), Gaps = 5/128 (3%)
Query: 22 IGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPD 81
+ +R+L V+ D + +++ LR C Y+V + + A + L+ +N DLV+++V +P
Sbjct: 37 VALRILLVEADDSTRQIIAALLRKCSYKVAAVSDGLKAWETLKGRPHNIDLVLTEVELPS 96
Query: 82 MDGFKLLEHVGLEMD----LPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQ 137
+ GF LL + +E D +PVIM+S+ V+K + GA D+L+KPVR EL+N+WQ
Sbjct: 97 ISGFALLTLI-MEHDVCKNIPVIMMSSNDAITTVLKCMLKGAADFLIKPVRKNELRNLWQ 155
Query: 138 HVIRRKKV 145
HV RR+ +
Sbjct: 156 HVWRRQTL 163
>gi|84570635|dbj|BAE72702.1| pseudo-response regulator 95 homologue [Lemna gibba]
Length = 460
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 92/148 (62%), Gaps = 9/148 (6%)
Query: 4 EERMGSAGCEDGDI--DKF--PIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTA 59
E R+ +AG E + +KF + +RVL V+ D + K++ LR C Y+V+ + + A
Sbjct: 7 EMRIDAAGEEPRVVKWEKFLPRMFLRVLLVEADDSTRKIVAALLRKCGYKVSSASDGLEA 66
Query: 60 LKMLRENRNNFDLVISDVHMPDMDGFKLL----EHVGLEMDLPVIMLSAYGDTKLVMKGI 115
K L+E N+ DLV+++V +P++ G+ LL EH + +PVIM+S+ K+V + +
Sbjct: 67 WKTLKEKPNDTDLVLTEVELPNVSGYALLSMMMEHETCK-SIPVIMMSSNDSMKMVFECM 125
Query: 116 THGACDYLLKPVRIEELKNIWQHVIRRK 143
GA D+L+KP+R EL+N+WQHV RR+
Sbjct: 126 LKGAADFLVKPIRKNELRNLWQHVWRRQ 153
>gi|225453624|ref|XP_002266192.1| PREDICTED: two-component response regulator-like APRR5-like [Vitis
vinifera]
Length = 641
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 77/123 (62%), Gaps = 5/123 (4%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+RVL V+ D + +++ LR C Y+V + + A + L+ N DL++++V +P +
Sbjct: 51 LRVLLVEPDDSTRQIIAALLRKCSYKVAAVSDGLKAWEALKGEPQNVDLILTEVELPSIS 110
Query: 84 GFKLLEHVGLEMDL----PVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
GF LL + +E D+ PVIM+S++ +V+K + GA D+L+KPVR EL+N+WQHV
Sbjct: 111 GFALLSLI-MEDDICKKIPVIMMSSHDSISMVLKCMLKGAADFLVKPVRKNELRNLWQHV 169
Query: 140 IRR 142
RR
Sbjct: 170 WRR 172
>gi|357509257|ref|XP_003624917.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|124361203|gb|ABN09175.1| Homeodomain-related [Medicago truncatula]
gi|355499932|gb|AES81135.1| Two-component response regulator ARR1 [Medicago truncatula]
Length = 299
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 56/66 (84%)
Query: 205 EDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFR 264
E + T K+PR+VWTP+LH++FV AV LG+ AVPK I+ LM+V+GLTRENVASHLQK+R
Sbjct: 84 EPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYR 143
Query: 265 LYLKRL 270
LYLKR+
Sbjct: 144 LYLKRM 149
>gi|308913674|gb|ADO51647.1| PRR59 [Zea mays]
Length = 695
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 73/122 (59%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+RVL V+ D + +++ LR C Y V + A +++RE +FDLV+++V MP +
Sbjct: 53 LRVLLVEHDDSTRQIVTALLRKCGYRVAAVADGMKAWEVMRERAYDFDLVLTEVAMPSLS 112
Query: 84 GFKLLEHVGLEMD---LPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
G +LL + + +PVIM+S+ V+K + GA D+L+KPVR EL N+WQHV
Sbjct: 113 GIQLLSRIAAAAECKNIPVIMMSSQDSIGTVLKCMQKGAVDFLVKPVRKNELGNLWQHVW 172
Query: 141 RR 142
RR
Sbjct: 173 RR 174
>gi|449456441|ref|XP_004145958.1| PREDICTED: two-component response regulator-like PRR95-like
[Cucumis sativus]
Length = 696
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 75/123 (60%), Gaps = 3/123 (2%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+RVL V+ D + +++ LR C Y V + A ++L+E N DL++++V +P +
Sbjct: 61 LRVLLVEADDSTRQIITALLRKCCYRVAAVPDGLKAWEILKERPRNVDLILAEVELPSIS 120
Query: 84 GFKLLEHV-GLEM--DLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
GF LL + G E ++PVIM+S+ V K + GA DYL+KP+R EL+N+WQHV
Sbjct: 121 GFALLTLIMGHETCKNIPVIMMSSEDSISTVYKCMMKGAADYLVKPLRRNELRNLWQHVW 180
Query: 141 RRK 143
RR+
Sbjct: 181 RRQ 183
>gi|449497396|ref|XP_004160390.1| PREDICTED: two-component response regulator-like PRR95-like
[Cucumis sativus]
Length = 696
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 75/123 (60%), Gaps = 3/123 (2%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+RVL V+ D + +++ LR C Y V + A ++L+E N DL++++V +P +
Sbjct: 61 LRVLLVEADDSTRQIITALLRKCCYRVAAVPDGLKAWEILKERPRNVDLILAEVELPSIS 120
Query: 84 GFKLLEHV-GLEM--DLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
GF LL + G E ++PVIM+S+ V K + GA DYL+KP+R EL+N+WQHV
Sbjct: 121 GFALLTLIMGHETCKNIPVIMMSSEDSISTVYKCMMKGAADYLVKPLRRNELRNLWQHVW 180
Query: 141 RRK 143
RR+
Sbjct: 181 RRQ 183
>gi|115452319|ref|NP_001049760.1| Os03g0284100 [Oryza sativa Japonica Group]
gi|122247198|sp|Q10N34.1|PRR73_ORYSJ RecName: Full=Two-component response regulator-like PRR73; AltName:
Full=Pseudo-response regulator 73; Short=OsPRR73
gi|51571879|dbj|BAD38856.1| pseudo-response regulator 73 [Oryza sativa Japonica Group]
gi|108707543|gb|ABF95338.1| Two-component response regulator-like PRR73, putative, expressed
[Oryza sativa Japonica Group]
gi|113548231|dbj|BAF11674.1| Os03g0284100 [Oryza sativa Japonica Group]
gi|222624693|gb|EEE58825.1| hypothetical protein OsJ_10396 [Oryza sativa Japonica Group]
Length = 767
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+RVL V++D + +V+ LR C YEV + A + L + +N+ DLV+++V MP +
Sbjct: 81 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHIDLVLTEVVMPRLS 140
Query: 84 GFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
G LL + + D+PVIM+S+ V K ++ GA D+L+KP+R ELKN+WQHV
Sbjct: 141 GIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 200
Query: 141 RR 142
RR
Sbjct: 201 RR 202
>gi|325910796|dbj|BAJ83828.1| circadian response regulator 2a [Physcomitrella patens subsp.
patens]
Length = 915
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 72/117 (61%), Gaps = 5/117 (4%)
Query: 30 DDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDGFKLLE 89
+DD V+ LR C YEVT A +L E +NFDLV++DV MP + G +L
Sbjct: 189 EDDDATRHVVGALLRNCNYEVTSVANGSLAWGLLEEANSNFDLVLTDVVMPCLSGVGILS 248
Query: 90 HVGLEMD----LPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRR 142
+ L+ + +P++++S+Y +V + ++ GACDYL+KPVR ELKN+WQHV R+
Sbjct: 249 KM-LKREACKRVPIVIMSSYDSLNIVFRCLSKGACDYLVKPVRKNELKNLWQHVWRK 304
>gi|158513189|sp|A2XFB7.2|PRR73_ORYSI RecName: Full=Two-component response regulator-like PRR73; AltName:
Full=Pseudo-response regulator 73; Short=OsPRR73
Length = 767
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+RVL V++D + +V+ LR C YEV + A + L + +N+ DLV+++V MP +
Sbjct: 81 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHIDLVLTEVVMPRLS 140
Query: 84 GFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
G LL + + D+PVIM+S+ V K ++ GA D+L+KP+R ELKN+WQHV
Sbjct: 141 GIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 200
Query: 141 RR 142
RR
Sbjct: 201 RR 202
>gi|51571885|dbj|BAD38859.1| pseudo-response regulator 73 [Oryza sativa Indica Group]
Length = 767
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+RVL V++D + +V+ LR C YEV + A + L + +N+ DLV+++V MP +
Sbjct: 81 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHIDLVLTEVVMPRLS 140
Query: 84 GFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
G LL + + D+PVIM+S+ V K ++ GA D+L+KP+R ELKN+WQHV
Sbjct: 141 GIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 200
Query: 141 RR 142
RR
Sbjct: 201 RR 202
>gi|195604808|gb|ACG24234.1| two-component response regulator-like PRR73 [Zea mays]
Length = 765
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 84/145 (57%), Gaps = 3/145 (2%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+RVL V++D + +V+ LR C YEV + A + L + +NN DLV+++V M +
Sbjct: 82 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWRYLEDLQNNIDLVLTEVFMTCLS 141
Query: 84 GFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
G LL + + D+PVIM+S +V K ++ GA D+L+KP+R ELKN+WQHV
Sbjct: 142 GIGLLSKITSHKICKDIPVIMMSTNDSMSMVFKCLSKGAVDFLVKPLRKNELKNLWQHVW 201
Query: 141 RRKKVGPKDQNKLLNQENSRVGAGE 165
RR ++ + Q+ +++ G+
Sbjct: 202 RRCHSSSGSESGIQTQKCAKLNTGD 226
>gi|24796813|gb|AAN64489.1| putative pseudo-response regulator [Oryza sativa Japonica Group]
Length = 789
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+RVL V++D + +V+ LR C YEV + A + L + +N+ DLV+++V MP +
Sbjct: 81 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHIDLVLTEVVMPRLS 140
Query: 84 GFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
G LL + + D+PVIM+S+ V K ++ GA D+L+KP+R ELKN+WQHV
Sbjct: 141 GIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 200
Query: 141 RR 142
RR
Sbjct: 201 RR 202
>gi|108707546|gb|ABF95341.1| Two-component response regulator-like PRR73, putative, expressed
[Oryza sativa Japonica Group]
Length = 745
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+RVL V++D + +V+ LR C YEV + A + L + +N+ DLV+++V MP +
Sbjct: 81 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHIDLVLTEVVMPRLS 140
Query: 84 GFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
G LL + + D+PVIM+S+ V K ++ GA D+L+KP+R ELKN+WQHV
Sbjct: 141 GIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 200
Query: 141 RR 142
RR
Sbjct: 201 RR 202
>gi|357157434|ref|XP_003577797.1| PREDICTED: two-component response regulator-like PRR95-like,
partial [Brachypodium distachyon]
Length = 681
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 96/198 (48%), Gaps = 21/198 (10%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+RVL V+ D + +V+ LR C Y V + A +++R FDLV+++V MP +
Sbjct: 18 LRVLLVEHDDSTRQVVTALLRKCGYRVAAVADGMKAWEVMRGRAYAFDLVLTEVDMPTLS 77
Query: 84 GFKLLEHVGLEMD---LPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
G LL + + +PVIM+S+ V++ + +GA D+L+KPVR EL+N+WQHV
Sbjct: 78 GIDLLARIVAAHECKNIPVIMMSSQDSIGTVLRCMQNGAVDFLVKPVRKNELRNLWQHVW 137
Query: 141 RRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDD 200
RR + + N ++ + A G NR + + DE+ D
Sbjct: 138 RRHSMNTQTNASENNAASNHISANSG----------------NRSKTGDNSDEESDAQSS 181
Query: 201 G--HENEDSTTQKKPRVV 216
G E E + +K P V
Sbjct: 182 GSKRETEIQSVEKLPETV 199
>gi|240254335|ref|NP_176988.4| pseudo-response regulator 6 [Arabidopsis thaliana]
gi|363548390|sp|Q9C9F6.2|APRR6_ARATH RecName: Full=Putative two-component response regulator-like APRR6;
AltName: Full=Pseudo-response regulator 6
gi|332196644|gb|AEE34765.1| pseudo-response regulator 6 [Arabidopsis thaliana]
Length = 755
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 128/275 (46%), Gaps = 23/275 (8%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+ +L +D D + L + L+ V + A AL M+ + + L+I+++ MP +D
Sbjct: 13 ISILLIDHDTASIASLTSMLQQFSKRVMSVDVASKALSMIEKQKKEIGLIIANIEMPHID 72
Query: 84 GFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRK 143
L + L+ D+P+I+++ TK +T AC L KP+ +++KN+WQHV +K
Sbjct: 73 SHSFLNALLLK-DIPLILINPEIKTKEPSDLLTKRACFSLDKPISNDDIKNMWQHVFSKK 131
Query: 144 KVGPK------DQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGK-----------SNRKR 186
K DQ +++++ ++ A + G+ + +KR
Sbjct: 132 SQELKKINITEDQENVMDKDTYQIEAFRANLKRQRISQASLLGRRPFIDTFSTYETFQKR 191
Query: 187 KDQDGDEDEDGDDDGHENEDSTTQKKPRV-----VWTPELHRKFVGAVNQLGVDKAVPKK 241
K E + E E+ + K V +W E H KF+ A++ LG + PK
Sbjct: 192 KSIANVEWKTTPSYAIEIENKRKEWKKSVGRRKSLWNSERHMKFIAAISILGEEDFRPKS 251
Query: 242 ILDLMNVEGLTRENVASHLQKFRLYLKRLSNETPQ 276
IL++MN LT V SHLQK++ + ++S P+
Sbjct: 252 ILEIMNDPNLTHRQVGSHLQKYKAQIDQISYTLPR 286
>gi|413956105|gb|AFW88754.1| hypothetical protein ZEAMMB73_978741 [Zea mays]
Length = 743
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 87/160 (54%), Gaps = 7/160 (4%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+RVL V++D + +V+ LR C YEV + A + L + +NN DLV+++V MP +
Sbjct: 83 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWRYLEDLQNNIDLVLTEVFMPCLS 142
Query: 84 GFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
G LL + + D+PVIM+S +V K ++ GA D+L+KP+R ELKN+WQHV
Sbjct: 143 GIGLLSKITSHKICKDIPVIMMSTNDSMSMVFKCLSKGAVDFLVKPLRKNELKNLWQHVW 202
Query: 141 RRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNG 180
RR + L S G ++TG+ +NG
Sbjct: 203 RRCH----SVSCLFLSSGSESGIQTQKCAKLNTGDEYENG 238
>gi|224132554|ref|XP_002321349.1| pseudo response regulator [Populus trichocarpa]
gi|222868345|gb|EEF05476.1| pseudo response regulator [Populus trichocarpa]
Length = 687
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 93/161 (57%), Gaps = 13/161 (8%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVT-NQAVTALKMLRENRNNFDLVISDVHMPDM 82
+RVL V+ D + +++ LR C Y+ T + + A ++L+E +N DL++++V +P +
Sbjct: 65 LRVLLVEADDSTRQIIAALLRKCSYKAVATVSDGLKAWEILKERPHNIDLILTEVDLPSV 124
Query: 83 DGFKLL----EHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQH 138
G+ LL EH + ++PVIM+S+ K V K + GA DYL+KP+R EL+N+WQH
Sbjct: 125 SGYALLTLIMEH-EICKNIPVIMMSSQDSIKTVYKCMLRGAADYLVKPIRKNELRNLWQH 183
Query: 139 VIRRKKV-----GPKDQNKLLNQENSRVGAGEGGQGAMSTG 174
V R++ GP D++ + Q+ + + G S+G
Sbjct: 184 VWRKQSSLGGGNGPHDES--VGQDKTEATSENNADGNHSSG 222
>gi|319657108|gb|ADV58932.1| pseudo-response regulator 7-like protein [Beta vulgaris subsp.
vulgaris]
Length = 718
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 78/123 (63%), Gaps = 5/123 (4%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+RVL V++D + V+ LR C YEV + + A K+L + N DLV+++V MP +
Sbjct: 84 VRVLLVENDDSTRHVVAALLRNCCYEVVEASNGLQAWKILEDIENRIDLVLTEVVMPCVS 143
Query: 84 G----FKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G FK++ H + ++PV+M+S++ LV K ++ GA D+L+KP+R ELKN+WQH+
Sbjct: 144 GIALLFKIMSHKSRK-NVPVVMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHL 202
Query: 140 IRR 142
RR
Sbjct: 203 WRR 205
>gi|157399678|gb|ABV53463.1| pseudo-response regulator 7 [Castanea sativa]
Length = 784
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
++VL V++D + V+ LR C YEVT + A K+L + + DLV+++V MP +
Sbjct: 98 LKVLLVENDDSTRHVVSALLRNCGYEVTAAENGLQAWKILEDYTTHVDLVLTEVVMPCLS 157
Query: 84 GFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
G LL + ++PVIM+S+Y +V K ++ GA D+L KP+R ELKN+WQHV
Sbjct: 158 GIGLLSKIMSHKTCKNIPVIMMSSYDSMNIVFKCLSKGAVDFLAKPIRKNELKNLWQHVW 217
Query: 141 RR 142
R+
Sbjct: 218 RK 219
>gi|168027167|ref|XP_001766102.1| circadian clock protein PRR2 [Physcomitrella patens subsp. patens]
gi|162682745|gb|EDQ69161.1| circadian clock protein PRR2 [Physcomitrella patens subsp. patens]
Length = 1143
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/121 (40%), Positives = 73/121 (60%), Gaps = 5/121 (4%)
Query: 30 DDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDGFKLLE 89
+DD V+ LR C YEVT A +L E +NFDLV++DV MP + G +L
Sbjct: 189 EDDDATRHVVGALLRNCNYEVTSVANGSLAWGLLEEANSNFDLVLTDVVMPCLSGVGILS 248
Query: 90 HVGLEMD----LPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKV 145
+ L+ + +P++++S+Y +V + ++ GACDYL+KPVR ELKN+WQHV R+
Sbjct: 249 KM-LKREACKRVPIVIMSSYDSLNIVFRCLSKGACDYLVKPVRKNELKNLWQHVWRKCHS 307
Query: 146 G 146
G
Sbjct: 308 G 308
>gi|449448936|ref|XP_004142221.1| PREDICTED: two-component response regulator-like APRR7-like
[Cucumis sativus]
Length = 797
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 101/195 (51%), Gaps = 7/195 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
++VL V++D + ++ L C YEV + A KML + N+ DLV+++V MP +
Sbjct: 89 LKVLLVENDDSTRHLVTALLCNCSYEVIAAANGLHAWKMLEDLTNHIDLVLTEVVMPCLS 148
Query: 84 GFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
G LL + ++PVIM+S++ LV K ++ GA D+L+KP+R ELKN+WQHV
Sbjct: 149 GIGLLCKIMNHKTRKNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 208
Query: 141 RRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDD 200
RR ++ Q V + + +TG++D + N + G DG DD
Sbjct: 209 RRCHSSSGSGSESGTQTQKSVKSKSVEKSDNNTGSNDDEEEDN----ESIGFNIADGSDD 264
Query: 201 GHENEDSTTQKKPRV 215
G + S T++ V
Sbjct: 265 GSGTQSSWTKQAIEV 279
>gi|326518812|dbj|BAJ92567.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 687
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 99/196 (50%), Gaps = 17/196 (8%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+RVL V+ D + +V+ LR C Y V + A +++R FDLV+++V+MP +
Sbjct: 38 LRVLLVEHDDSTRQVVTALLRKCGYRVAAVADGMKAWEVMRGRAYAFDLVLTEVNMPTLS 97
Query: 84 GFKLLEHVGLE---MDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
G LL + ++PVIM+S+ V+K + +GA D+L+KPVR EL+N+WQHV
Sbjct: 98 GIDLLSRIVAADECKNIPVIMMSSQDSIGTVLKCMQNGAVDFLVKPVRKNELRNLWQHVW 157
Query: 141 RRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDD 200
RR + NS++ A E A S S +G ++ ++ D + D
Sbjct: 158 RRHSM------------NSQLNASEN--NAASNHISVNSGTGSKTGENSDEESDAQSSGS 203
Query: 201 GHENEDSTTQKKPRVV 216
E E + +K P V
Sbjct: 204 KRETEIQSVEKLPETV 219
>gi|108707544|gb|ABF95339.1| Two-component response regulator-like PRR73, putative, expressed
[Oryza sativa Japonica Group]
Length = 533
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+RVL V++D + +V+ LR C YEV + A + L + +N+ DLV+++V MP +
Sbjct: 81 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHIDLVLTEVVMPRLS 140
Query: 84 GFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
G LL + + D+PVIM+S+ V K ++ GA D+L+KP+R ELKN+WQHV
Sbjct: 141 GIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 200
Query: 141 RR 142
RR
Sbjct: 201 RR 202
>gi|356536913|ref|XP_003536977.1| PREDICTED: two-component response regulator-like APRR7-like
[Glycine max]
Length = 747
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
++VL V+ D + V+ LR C YEV + A K+L + N+ DLV+++V MP +
Sbjct: 79 LKVLLVEIDDSTRHVVTALLRNCSYEVIEAANGLQAWKILEDLTNHIDLVLTEVAMPGLS 138
Query: 84 GFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
G LL + ++PV+M+S++ LV K ++ GA D+L+KP+R ELKN+WQHV
Sbjct: 139 GIGLLYKIMGHKTRKNIPVVMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 198
Query: 141 RR 142
RR
Sbjct: 199 RR 200
>gi|357112782|ref|XP_003558186.1| PREDICTED: two-component response regulator-like PRR73-like
[Brachypodium distachyon]
Length = 766
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 72/122 (59%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+RVL V++D +V+ LR C YEV + A + L + +N DLV+++V MP +
Sbjct: 82 LRVLLVENDDCTRQVVGALLRKCGYEVISAENGLHAWQYLEDLQNRIDLVLTEVAMPCLS 141
Query: 84 GFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
G LL + + D+PVIM+S V K ++ GA D+L+KP+R ELKN+WQH+
Sbjct: 142 GISLLSKIMSHKICKDIPVIMMSKNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHIW 201
Query: 141 RR 142
RR
Sbjct: 202 RR 203
>gi|357159597|ref|XP_003578497.1| PREDICTED: two-component response regulator-like PRR95-like
[Brachypodium distachyon]
Length = 626
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 75/124 (60%), Gaps = 5/124 (4%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+RVL + D + V+ LR C Y V + V A ++L+E N DLV+++V +P M
Sbjct: 39 VRVLLAEGDDSTRHVISALLRKCGYHVAAASDGVKAWEILKEKSFNIDLVLTEVELPAMS 98
Query: 84 GFKLL----EHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
GF LL EH + ++PVIM+S+ +V K + GA D+L+KP+R EL+N+WQHV
Sbjct: 99 GFLLLSTIMEHEACK-NIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQHV 157
Query: 140 IRRK 143
R++
Sbjct: 158 WRKQ 161
>gi|356571269|ref|XP_003553801.1| PREDICTED: two-component response regulator-like PRR95-like
[Glycine max]
Length = 695
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 79/135 (58%), Gaps = 5/135 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+RVL V+ D + +++ LR C Y+V + A + L+ + DL++++V +P +
Sbjct: 33 LRVLLVEADDSTRQIIAALLRKCGYKVVAFCDGLKAWETLKNKAFDLDLILTEVDLPSIS 92
Query: 84 GFKLLEHVGLEMDL----PVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
GF LL + +E D+ PVIM+S++ +V K + GA D+L+KPVR EL+N+WQHV
Sbjct: 93 GFSLLTLI-MEHDICKNIPVIMMSSHDSVSMVFKCMLKGAADFLIKPVRKNELRNLWQHV 151
Query: 140 IRRKKVGPKDQNKLL 154
RR + QN L
Sbjct: 152 WRRHAISRPPQNLTL 166
>gi|357464211|ref|XP_003602387.1| Two-component response regulator-like PRR73 [Medicago truncatula]
gi|355491435|gb|AES72638.1| Two-component response regulator-like PRR73 [Medicago truncatula]
Length = 685
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 90/171 (52%), Gaps = 18/171 (10%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+RVL V+ D +++ LR C Y+V + A ++L+ + DL++++V +P +
Sbjct: 56 LRVLLVEADDCTRQIITALLRKCNYKVAAVADGLKAWEILKGRPRSIDLILTEVDLPAIS 115
Query: 84 GFKLLEHVGLEMDL----PVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G+ LL + +E D+ PVIM+S+ V K + GA DYL+KP+RI EL+N+WQHV
Sbjct: 116 GYALLTLI-MEHDICKSIPVIMMSSQDSVSTVYKCMLRGAADYLVKPIRINELRNLWQHV 174
Query: 140 IRRKKV--------GPKDQNKLLNQ-----ENSRVGAGEGGQGAMSTGNSD 177
RR+ GP+D++ + EN+ GG A N D
Sbjct: 175 WRRQTQSAATAGINGPQDESDTQQKFEATAENNAASNRSGGDAACIQRNKD 225
>gi|255582079|ref|XP_002531836.1| sensory transduction histidine kinase, putative [Ricinus communis]
gi|223528532|gb|EEF30556.1| sensory transduction histidine kinase, putative [Ricinus communis]
Length = 807
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 75/123 (60%), Gaps = 5/123 (4%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
++VL V++D + V+ LR C YEV A K+L + N+ DLV+++V MP +
Sbjct: 74 LKVLLVENDDSTRHVVSALLRNCSYEVNAVANGFQAWKILEDMNNHTDLVLTEVVMPILS 133
Query: 84 GFKLL----EHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL H L ++PVIM+S++ +V K ++ GA D+L+KP+R ELKN+WQHV
Sbjct: 134 GIGLLCKIRNHKTLR-NIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRKNELKNLWQHV 192
Query: 140 IRR 142
RR
Sbjct: 193 WRR 195
>gi|414590048|tpg|DAA40619.1| TPA: hypothetical protein ZEAMMB73_710468 [Zea mays]
Length = 596
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 98/183 (53%), Gaps = 13/183 (7%)
Query: 17 IDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISD 76
+ + P+ RVL + D + V+ LR C Y V + V A +L+E N DLV+++
Sbjct: 39 LPRMPV--RVLLAEGDDSTRHVISALLRKCGYRVAAASDGVKAWDILKEKSFNIDLVLTE 96
Query: 77 VHMPDMDGFKLLEHVGLEMD----LPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEEL 132
V +P M GF LL + +E D +PVIM+S++ +V K + GA D+L+KP+R EL
Sbjct: 97 VELPLMSGFLLLSTI-MEHDASKNIPVIMMSSHDSVSMVFKCMLKGASDFLVKPLRKNEL 155
Query: 133 KNIWQHVIRRKKV--GPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGK-SNRKRKDQ 189
+N+WQHV R++ GP Q+ QE + E G N + +G NR+ +Q
Sbjct: 156 RNLWQHVWRKQLANGGPDVQHI---QEENLAERMEQKTGVTKDDNLNSDGPCKNRECSEQ 212
Query: 190 DGD 192
+ D
Sbjct: 213 ESD 215
>gi|302782157|ref|XP_002972852.1| hypothetical protein SELMODRAFT_450934 [Selaginella moellendorffii]
gi|300159453|gb|EFJ26073.1| hypothetical protein SELMODRAFT_450934 [Selaginella moellendorffii]
Length = 639
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 72/124 (58%), Gaps = 3/124 (2%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
++VL V+DD + V+ LR C Y+V + A +L + DLV++DV MP +
Sbjct: 42 LKVLLVEDDDSTRHVVAALLRNCGYQVVPAANGLQAWSLLDDRNREIDLVLTDVVMPGLS 101
Query: 84 GFKLLE---HVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
G LL H +PV+M+S++ T +V K +T GA D+L+KPVR ELKN+WQH
Sbjct: 102 GLGLLSKIMHHKNHQKVPVVMMSSHDSTNVVFKCLTKGAADFLVKPVRKNELKNLWQHAW 161
Query: 141 RRKK 144
R+ +
Sbjct: 162 RKAR 165
>gi|67005935|gb|AAY62604.1| pseudo response regulator 3 [Arabidopsis thaliana]
Length = 495
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 81/128 (63%), Gaps = 6/128 (4%)
Query: 20 FPI-GMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVH 78
P+ ++VL V++D + ++ L+ C YEVT + A ++L + ++ DLV+++V
Sbjct: 59 LPVRSLKVLLVENDDSTRHIVTALLKNCSYEVTAVPDVLEAWRILEDEKSCIDLVLTEVD 118
Query: 79 MPDMDGF----KLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKN 134
MP G K++ H L+ ++PVIM+S++ LV K +++GA D+L+KP+R ELKN
Sbjct: 119 MPVHSGTGLLSKIMSHKTLK-NIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNELKN 177
Query: 135 IWQHVIRR 142
+WQHV RR
Sbjct: 178 LWQHVWRR 185
>gi|18424319|ref|NP_568919.1| two-component response regulator-like APRR3 [Arabidopsis thaliana]
gi|334188506|ref|NP_001190574.1| two-component response regulator-like APRR3 [Arabidopsis thaliana]
gi|52783244|sp|Q9LVG4.1|APRR3_ARATH RecName: Full=Two-component response regulator-like APRR3; AltName:
Full=Pseudo-response regulator 3
gi|8777349|dbj|BAA96939.1| unnamed protein product [Arabidopsis thaliana]
gi|10281008|dbj|BAB13744.1| pseudo-response regulator 3 [Arabidopsis thaliana]
gi|225879138|dbj|BAH30639.1| hypothetical protein [Arabidopsis thaliana]
gi|332009893|gb|AED97276.1| two-component response regulator-like APRR3 [Arabidopsis thaliana]
gi|332009894|gb|AED97277.1| two-component response regulator-like APRR3 [Arabidopsis thaliana]
Length = 495
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 81/128 (63%), Gaps = 6/128 (4%)
Query: 20 FPI-GMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVH 78
P+ ++VL V++D + ++ L+ C YEVT + A ++L + ++ DLV+++V
Sbjct: 59 LPVRSLKVLLVENDDSTRHIVTALLKNCSYEVTAVPDVLEAWRILEDEKSCIDLVLTEVD 118
Query: 79 MPDMDGF----KLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKN 134
MP G K++ H L+ ++PVIM+S++ LV K +++GA D+L+KP+R ELKN
Sbjct: 119 MPVHSGTGLLSKIMSHKTLK-NIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNELKN 177
Query: 135 IWQHVIRR 142
+WQHV RR
Sbjct: 178 LWQHVWRR 185
>gi|84570627|dbj|BAE72698.1| pseudo-response regulator 59 homologue [Lemna paucicostata]
Length = 501
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/180 (36%), Positives = 91/180 (50%), Gaps = 14/180 (7%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+RVL V+ D ++ LR C Y V + A ++ E NFD+++S+V +P
Sbjct: 73 LRVLLVEPDDCTRHIVTALLRKCSYHVAAVADGIKAWDIVEEKNFNFDIILSEVEVPSFS 132
Query: 84 GFKLLEHV-GLEMD--LPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
G LL + G E+ +PVIM+S+ +V K + GA D+L+KPVR EL+N+WQHV
Sbjct: 133 GINLLSKIMGTELSRSIPVIMMSSQDSVSVVFKCMQKGAVDFLVKPVRKNELRNLWQHVW 192
Query: 141 RRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDD 200
RR P EN G+ Q A S S+ NG N KD DE D +DD
Sbjct: 193 RRHCSIPYAN----GTEN-----GDNTQSA-SENMSNNNGAGN-DVKDTKMDEGCDDNDD 241
>gi|357121369|ref|XP_003562393.1| PREDICTED: two-component response regulator-like PRR37-like
[Brachypodium distachyon]
Length = 660
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+RVL V+ D + +++ LR C Y+V A L++ ++N DLV+S+V MP +
Sbjct: 21 IRVLLVETDDSTRQIVTALLRHCMYQVIPAENGDQAWARLQDMQDNIDLVLSEVVMPGLS 80
Query: 84 GFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
G LLE + + D+PVIM+S+ V K ++ GA D+L+KP+R ELKN+WQHV
Sbjct: 81 GISLLEKIMAHNVCKDIPVIMMSSNDAMGTVFKCLSTGAVDFLVKPIRKNELKNLWQHVW 140
Query: 141 RR 142
RR
Sbjct: 141 RR 142
>gi|225439773|ref|XP_002275837.1| PREDICTED: two-component response regulator-like APRR7 [Vitis
vinifera]
gi|297741496|emb|CBI32628.3| unnamed protein product [Vitis vinifera]
Length = 211
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 80/123 (65%), Gaps = 3/123 (2%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
RVL V++D + V+ LR C Y+VT T+ + A ++L++ N+ DLV+++V++P + G
Sbjct: 59 RVLLVENDDSTRYVIGALLRNCGYQVTETSNGLQAWRILKDTSNHIDLVLTEVNLPRLSG 118
Query: 85 FKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIR 141
LL + ++PVIM+S + LV+K ++ GA D+L+KPVR ELK +WQH+ R
Sbjct: 119 IALLCKIMNHKTRKNIPVIMMSTHDSGALVLKCLSKGATDFLVKPVRKNELKFLWQHIWR 178
Query: 142 RKK 144
R++
Sbjct: 179 RRQ 181
>gi|84570633|dbj|BAE72701.1| pseudo-response regulator 59 homologue [Lemna gibba]
Length = 496
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 72/122 (59%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+RVL V+ D + ++ LR C Y V + A +++E NFD+++S+V +P
Sbjct: 57 LRVLLVEPDDSTRHIVTALLRKCSYHVASVADGIKAWDIVKEKNFNFDIILSEVEVPSFS 116
Query: 84 GFKLLEHV-GLEMD--LPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
G LL + G E+ +PVIM+S+ +V K + GA D+L+KPVR EL+N+WQHV
Sbjct: 117 GISLLTKIMGTELSRSIPVIMMSSQDSVSVVFKCMQKGAVDFLVKPVRKNELRNLWQHVW 176
Query: 141 RR 142
RR
Sbjct: 177 RR 178
>gi|255568450|ref|XP_002525199.1| sensory transduction histidine kinase, putative [Ricinus communis]
gi|223535496|gb|EEF37165.1| sensory transduction histidine kinase, putative [Ricinus communis]
Length = 762
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
++VL V++D + V+ LR C YEV + A ++L + N DLV+++V MP +
Sbjct: 88 LKVLLVENDYSTRHVVTALLRNCSYEVIEATNGLQAWRILEDLTNQIDLVLTEVVMPCLS 147
Query: 84 GFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
G LL + ++PVIM+S++ LV K ++ GA D+L+KP+R ELKN+WQHV
Sbjct: 148 GIGLLYKIMSHKTRKNVPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 207
Query: 141 RR 142
RR
Sbjct: 208 RR 209
>gi|356545957|ref|XP_003541399.1| PREDICTED: two-component response regulator-like APRR7-like
[Glycine max]
Length = 749
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
++VL V+ D + V+ LR C YEV + A K+L + N+ DL++++V MP +
Sbjct: 81 LKVLLVEYDDSTRHVVTALLRNCSYEVIDAANGLQAWKILEDLTNHIDLILTEVAMPGLS 140
Query: 84 GFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
G LL + ++PV+M+S++ LV K ++ GA D+L+KP+R ELKN+WQHV
Sbjct: 141 GIGLLYKIMGHKTRKNIPVVMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 200
Query: 141 RR 142
RR
Sbjct: 201 RR 202
>gi|356518667|ref|XP_003528000.1| PREDICTED: two-component response regulator-like PRR95-like
[Glycine max]
Length = 700
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 81/136 (59%), Gaps = 10/136 (7%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+RVL V+ D + +++ LR C Y+V + A ++L+ +N DL++++V +P +
Sbjct: 50 LRVLLVEADDSTRQIIAALLRKCSYKVAAVPDGLKAWELLKGRPHNVDLILTEVDLPSVS 109
Query: 84 GFKLL----EHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G+ LL EH + ++PVIM+S+ V K + GA DYL+KP+R EL+N+WQHV
Sbjct: 110 GYALLTLIMEH-EICKNIPVIMMSSQDSISTVYKCMLRGAADYLVKPIRKNELRNLWQHV 168
Query: 140 IRRKKV-----GPKDQ 150
RR+ GP+D+
Sbjct: 169 WRRQSSTTGINGPQDE 184
>gi|242093584|ref|XP_002437282.1| hypothetical protein SORBIDRAFT_10g024170 [Sorghum bicolor]
gi|241915505|gb|EER88649.1| hypothetical protein SORBIDRAFT_10g024170 [Sorghum bicolor]
Length = 158
Score = 100 bits (249), Expect = 2e-18, Method: Composition-based stats.
Identities = 54/93 (58%), Positives = 64/93 (68%), Gaps = 5/93 (5%)
Query: 13 EDGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENR---NN 69
E+ D FP G+RVLAV+ D C K+LE L+ C Y T+ A TAL MLRE + N
Sbjct: 22 EEMAADTFPAGLRVLAVEHDRVCSKILERQLKYCNYNATMVTNAQTALDMLRERKEYGNQ 81
Query: 70 FDLVISDVHM--PDMDGFKLLEHVGLEMDLPVI 100
FDLVIS+V M P+MDGFKLLE +GLEMDLPVI
Sbjct: 82 FDLVISNVAMPKPNMDGFKLLELIGLEMDLPVI 114
>gi|125529286|gb|EAY77400.1| hypothetical protein OsI_05389 [Oryza sativa Indica Group]
Length = 238
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/70 (65%), Positives = 56/70 (80%), Gaps = 3/70 (4%)
Query: 209 TQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLK 268
+ K+ R+VWTP+LH++FV V LG+ AVPK I+ LMNVEGLTRENVASHLQK+RLY+K
Sbjct: 115 SSKRARLVWTPQLHKRFVEVVAHLGMKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYVK 174
Query: 269 R---LSNETP 275
R LSNE P
Sbjct: 175 RMQGLSNEGP 184
>gi|108707545|gb|ABF95340.1| Two-component response regulator-like PRR73, putative, expressed
[Oryza sativa Japonica Group]
Length = 473
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+RVL V++D + +V+ LR C YEV + A + L + +N+ DLV+++V MP +
Sbjct: 81 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHIDLVLTEVVMPRLS 140
Query: 84 GFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
G LL + + D+PVIM+S+ V K ++ GA D+L+KP+R ELKN+WQHV
Sbjct: 141 GIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 200
Query: 141 RR 142
RR
Sbjct: 201 RR 202
>gi|46371870|gb|AAS90600.1| induced protein MgI1 [Oryza sativa Japonica Group]
Length = 238
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/70 (65%), Positives = 56/70 (80%), Gaps = 3/70 (4%)
Query: 209 TQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLK 268
+ K+ R+VWTP+LH++FV V LG+ AVPK I+ LMNVEGLTRENVASHLQK+RLY+K
Sbjct: 115 SSKRARLVWTPQLHKRFVEVVAHLGMKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYVK 174
Query: 269 R---LSNETP 275
R LSNE P
Sbjct: 175 RMQGLSNEGP 184
>gi|147776739|emb|CAN72415.1| hypothetical protein VITISV_027904 [Vitis vinifera]
Length = 991
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 76/123 (61%), Gaps = 5/123 (4%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+RVL V+ D + +++ LR C Y+V + + A + L+ N DL++++V +P +
Sbjct: 51 LRVLLVEPDDSTRQIIAALLRKCSYKVAAVSDGLKAWEALKGEPQNVDLILTEVELPSIS 110
Query: 84 GFKLLEHVGLEMDL----PVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
GF LL + +E D+ PVIM+S++ +V+K + GA D+L+KPVR EL N+WQHV
Sbjct: 111 GFALLSLI-MEDDICKKIPVIMMSSHDSISMVLKCMLKGAADFLVKPVRKNELXNLWQHV 169
Query: 140 IRR 142
RR
Sbjct: 170 WRR 172
>gi|67005937|gb|AAY62605.1| pseudo response regulator 3 [Arabidopsis thaliana]
Length = 495
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 81/128 (63%), Gaps = 6/128 (4%)
Query: 20 FPI-GMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVH 78
P+ ++VL V++D + ++ L+ C YE+T + A ++L + ++ DLV+++V
Sbjct: 59 LPVRSLKVLLVENDDSTRHIVTALLKNCSYEITAVPDVLEAWRILEDEKSCIDLVLTEVD 118
Query: 79 MPDMDGF----KLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKN 134
MP G K++ H L+ ++PVIM+S++ LV K +++GA D+L+KP+R ELKN
Sbjct: 119 MPVHSGTGLLSKIMSHKTLK-NIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNELKN 177
Query: 135 IWQHVIRR 142
+WQHV RR
Sbjct: 178 LWQHVWRR 185
>gi|242087939|ref|XP_002439802.1| hypothetical protein SORBIDRAFT_09g020340 [Sorghum bicolor]
gi|241945087|gb|EES18232.1| hypothetical protein SORBIDRAFT_09g020340 [Sorghum bicolor]
Length = 332
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 56/67 (83%)
Query: 204 NEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKF 263
+E + T K+PR+VWTP+LH++FV AV LG+ AVPK I+ LM+V+GLTRENVAS LQK+
Sbjct: 93 DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASQLQKY 152
Query: 264 RLYLKRL 270
RLYLKR+
Sbjct: 153 RLYLKRM 159
>gi|334188508|ref|NP_001190575.1| two-component response regulator-like APRR3 [Arabidopsis thaliana]
gi|332009895|gb|AED97278.1| two-component response regulator-like APRR3 [Arabidopsis thaliana]
Length = 522
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 81/128 (63%), Gaps = 6/128 (4%)
Query: 20 FPI-GMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVH 78
P+ ++VL V++D + ++ L+ C YEVT + A ++L + ++ DLV+++V
Sbjct: 59 LPVRSLKVLLVENDDSTRHIVTALLKNCSYEVTAVPDVLEAWRILEDEKSCIDLVLTEVD 118
Query: 79 MPDMDGF----KLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKN 134
MP G K++ H L+ ++PVIM+S++ LV K +++GA D+L+KP+R ELKN
Sbjct: 119 MPVHSGTGLLSKIMSHKTLK-NIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNELKN 177
Query: 135 IWQHVIRR 142
+WQHV RR
Sbjct: 178 LWQHVWRR 185
>gi|297736458|emb|CBI25329.3| unnamed protein product [Vitis vinifera]
Length = 769
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 77/123 (62%), Gaps = 5/123 (4%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
++VL V++D + +V+ LR C YEVT V A +L + N+ DLV+++V +P +
Sbjct: 94 LKVLLVENDNSTRQVVSALLRNCSYEVTAVANGVQAWSILDDLTNHVDLVLAEVALPSLS 153
Query: 84 GF----KLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G K++ H + ++PVIM+S++ +V K ++ GA D+ +KP+R ELKN+WQHV
Sbjct: 154 GIGLLCKIMNHKACK-NIPVIMMSSHDSVGIVFKCLSKGAVDFFVKPIRKNELKNLWQHV 212
Query: 140 IRR 142
R+
Sbjct: 213 WRK 215
>gi|384246908|gb|EIE20396.1| hypothetical protein COCSUDRAFT_9894, partial [Coccomyxa
subellipsoidea C-169]
Length = 59
Score = 100 bits (248), Expect = 3e-18, Method: Composition-based stats.
Identities = 45/59 (76%), Positives = 50/59 (84%)
Query: 211 KKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKR 269
KKPR+VWT ELH +F+ AV LGV AVPK IL LMNVEG+TRENVASHLQK+RLYLKR
Sbjct: 1 KKPRLVWTAELHARFMNAVTHLGVKHAVPKTILQLMNVEGMTRENVASHLQKYRLYLKR 59
>gi|115442515|ref|NP_001045537.1| Os01g0971800 [Oryza sativa Japonica Group]
gi|15289981|dbj|BAB63676.1| induced protein MgI1 [Oryza sativa Japonica Group]
gi|71067054|dbj|BAE16279.1| putative transcription factor [Oryza sativa Japonica Group]
gi|113535068|dbj|BAF07451.1| Os01g0971800 [Oryza sativa Japonica Group]
gi|125573476|gb|EAZ14991.1| hypothetical protein OsJ_04927 [Oryza sativa Japonica Group]
Length = 238
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/68 (67%), Positives = 55/68 (80%), Gaps = 3/68 (4%)
Query: 211 KKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKR- 269
K+ R+VWTP+LH++FV V LG+ AVPK I+ LMNVEGLTRENVASHLQK+RLY+KR
Sbjct: 117 KRARLVWTPQLHKRFVEVVAHLGMKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYVKRM 176
Query: 270 --LSNETP 275
LSNE P
Sbjct: 177 QGLSNEGP 184
>gi|359486449|ref|XP_002275645.2| PREDICTED: two-component response regulator-like PRR73 [Vitis
vinifera]
Length = 747
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 77/123 (62%), Gaps = 5/123 (4%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
++VL V++D + +V+ LR C YEVT V A +L + N+ DLV+++V +P +
Sbjct: 72 LKVLLVENDNSTRQVVSALLRNCSYEVTAVANGVQAWSILDDLTNHVDLVLAEVALPSLS 131
Query: 84 GF----KLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G K++ H + ++PVIM+S++ +V K ++ GA D+ +KP+R ELKN+WQHV
Sbjct: 132 GIGLLCKIMNHKACK-NIPVIMMSSHDSVGIVFKCLSKGAVDFFVKPIRKNELKNLWQHV 190
Query: 140 IRR 142
R+
Sbjct: 191 WRK 193
>gi|255080498|ref|XP_002503829.1| response regulator receiver/WD40 domain fusion protein [Micromonas
sp. RCC299]
gi|226519096|gb|ACO65087.1| response regulator receiver/WD40 domain fusion protein [Micromonas
sp. RCC299]
Length = 1414
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 75/127 (59%), Gaps = 4/127 (3%)
Query: 21 PIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMP 80
P + VL VDDD C ++ L+ C Y+VT + A+ +L E F+L+++DV MP
Sbjct: 6 PADVHVLLVDDDRVCRTLVAGMLKKCNYQVTTASSGEEAMALL-ERGTQFNLLLTDVMMP 64
Query: 81 DMDGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQ 137
D+DG LL +V ++PV+M+S+ VM I GA DYLLKPV + +K++W
Sbjct: 65 DVDGPTLLHYVRNNPFYQEMPVVMMSSNEHADTVMNCIRLGAEDYLLKPVTKKAVKHMWA 124
Query: 138 HVIRRKK 144
HV RRK+
Sbjct: 125 HVWRRKQ 131
>gi|356504197|ref|XP_003520885.1| PREDICTED: two-component response regulator-like PRR95-like
[Glycine max]
Length = 703
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 77/126 (61%), Gaps = 5/126 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+RVL V+ D + +++ L C Y+V + A + L+ ++ DL++++V +P +
Sbjct: 35 LRVLLVEADDSTRQIISALLHKCSYKVVAFCDGLKAWETLKNKPSDIDLILTEVDLPSIS 94
Query: 84 GFKLLEHVGLEMDL----PVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
GF LL + +E D+ PVIM+S++ +V+K + GA D+L+KPVR EL+N+WQHV
Sbjct: 95 GFSLLTLI-MEHDICKNIPVIMMSSHDSVSMVLKCMLKGAADFLIKPVRRNELRNLWQHV 153
Query: 140 IRRKKV 145
RR V
Sbjct: 154 WRRHAV 159
>gi|357519887|ref|XP_003630232.1| Two-component response regulator ARR2 [Medicago truncatula]
gi|355524254|gb|AET04708.1| Two-component response regulator ARR2 [Medicago truncatula]
Length = 234
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 72/124 (58%)
Query: 19 KFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVH 78
+FP + VL VD D L C Y+VT ++A A K+L E + D+V+ +
Sbjct: 13 QFPEDLNVLVVDHDTDVLNAAVEMSIPCNYQVTTCSKASFAFKLLTETKGCVDVVLIEAQ 72
Query: 79 MPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQH 138
MPDMD + + HV ++++ VIM+ G T VMK +T+GAC++ +KP ++KN+WQ
Sbjct: 73 MPDMDSYDFVRHVTQQINISVIMMCDDGSTNAVMKAVTNGACEFWIKPFIENQIKNMWQC 132
Query: 139 VIRR 142
V R+
Sbjct: 133 VARK 136
>gi|356509155|ref|XP_003523317.1| PREDICTED: two-component response regulator-like APRR9-like
[Glycine max]
Length = 655
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 76/124 (61%), Gaps = 5/124 (4%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+RVL V+ D + +++ LR C Y+V + A ++L+ +N DL++++V +P +
Sbjct: 49 LRVLLVEADDSTRQIIAALLRKCSYKVVAVPDGLKAWELLKGRPHNVDLILTEVDLPSIS 108
Query: 84 GFKLL----EHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G+ LL EH + ++PVIM+S+ V K + GA DYL+KP+R EL+N+WQHV
Sbjct: 109 GYALLTLIMEH-EICKNIPVIMMSSQDSISTVYKCMLRGAADYLVKPIRKNELRNLWQHV 167
Query: 140 IRRK 143
RR+
Sbjct: 168 WRRQ 171
>gi|357519851|ref|XP_003630214.1| Two-component response regulator ARR2 [Medicago truncatula]
gi|355524236|gb|AET04690.1| Two-component response regulator ARR2 [Medicago truncatula]
Length = 265
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 72/124 (58%)
Query: 19 KFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVH 78
+FP + VL VD D L C Y+VT ++A A K+L E + D+V+ +
Sbjct: 13 QFPEDLNVLVVDHDTDVLNAAVEMSIPCNYQVTTCSKASFAFKLLTETKGCVDVVLIEAQ 72
Query: 79 MPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQH 138
MPDMD + + HV ++++ VIM+ G T VMK +T+GAC++ +KP ++KN+WQ
Sbjct: 73 MPDMDSYDFVRHVTQQINISVIMMCDDGSTNAVMKAVTNGACEFWIKPFIENQIKNMWQC 132
Query: 139 VIRR 142
V R+
Sbjct: 133 VARK 136
>gi|224098134|ref|XP_002311124.1| predicted protein [Populus trichocarpa]
gi|222850944|gb|EEE88491.1| predicted protein [Populus trichocarpa]
Length = 711
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 77/122 (63%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
++VL V++D + V+ LR C YEVT + + A K+L++ N+ DLV+++V MP +
Sbjct: 37 LKVLLVENDDSTRHVVSALLRNCGYEVTAVSNGLQAWKVLQDLTNHIDLVLTEVAMPCLS 96
Query: 84 GFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
G LL + ++PVIM+S++ +V K ++ GA D+L+KP+R ELK +WQHV
Sbjct: 97 GIGLLSKIMSHKTCRNIPVIMMSSHDSMNVVFKCLSKGAVDFLVKPIRKNELKILWQHVW 156
Query: 141 RR 142
R+
Sbjct: 157 RK 158
>gi|297810367|ref|XP_002873067.1| pseudo-response regulator 7 [Arabidopsis lyrata subsp. lyrata]
gi|297318904|gb|EFH49326.1| pseudo-response regulator 7 [Arabidopsis lyrata subsp. lyrata]
Length = 733
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+RVL V++D ++ LR C YEV + + A K+L + N+ D+V+++V MP +
Sbjct: 85 IRVLLVENDDCTRYIVTALLRNCSYEVVEASNGIQAWKVLEDLNNHIDIVLTEVIMPYLS 144
Query: 84 GFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
G LL + ++PVIM+S++ LV K ++ GA D+L+KP+R ELK +WQHV
Sbjct: 145 GISLLSKILNHKSRRNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKILWQHVW 204
Query: 141 RR 142
RR
Sbjct: 205 RR 206
>gi|52783225|sp|Q6LA42.2|APRR5_ARATH RecName: Full=Two-component response regulator-like APRR5; AltName:
Full=Pseudo-response regulator 5
gi|9758535|dbj|BAB08930.1| unnamed protein product [Arabidopsis thaliana]
gi|17063183|gb|AAL32986.1| pseudo-response regulator 5 protein [Arabidopsis thaliana]
gi|23506027|gb|AAN28873.1| At5g24470/T31K7_5 [Arabidopsis thaliana]
Length = 558
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 74/126 (58%), Gaps = 5/126 (3%)
Query: 22 IGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPD 81
I +RVL V+ D + +++ LR C Y V + A +ML+ + DL++++V +P
Sbjct: 48 IALRVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLKAWEMLKGKPESVDLILTEVDLPS 107
Query: 82 MDGFKLLEHVGLEMDL----PVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQ 137
+ G+ LL + +E D+ PVIM+S V K + GA DYL+KP+R EL+N+WQ
Sbjct: 108 ISGYALLTLI-MEHDICKNIPVIMMSTQDSVNTVYKCMLKGAADYLVKPLRRNELRNLWQ 166
Query: 138 HVIRRK 143
HV RR+
Sbjct: 167 HVWRRQ 172
>gi|326491043|dbj|BAK05621.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 250
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 94/212 (44%), Gaps = 14/212 (6%)
Query: 23 GMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDV--HMP 80
G++VLAVDDDP L+ L LR C YEVT ALK L +N + FD V++
Sbjct: 20 GLKVLAVDDDPVYLRTLTQTLRRCGYEVTAKPSPAEALKELEKNPDGFDFVMTAALTRGR 79
Query: 81 DMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
MDGF LL +G + VI+ S + +G GAC KP+R ++ IWQHV+
Sbjct: 80 GMDGFDLLNRIGERYPV-VILFSGEESMETRRRGTQGGACYLAEKPMRDTQIYMIWQHVL 138
Query: 141 RRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDD 200
R ++ S G ++ R R D + + D
Sbjct: 139 RWRRENAAGVVAANANPR-----------PSSEGGHLEDTPRKRGRGVNDSGKGKGASDG 187
Query: 201 GHENEDSTTQKKPRVVWTPELHRKFVGAVNQL 232
G + T KK + WT E+H FV AV QL
Sbjct: 188 GGVQPVTNTTKKKKFEWTSEMHELFVSAVTQL 219
>gi|224098126|ref|XP_002311123.1| pseudo response regulator [Populus trichocarpa]
gi|222850943|gb|EEE88490.1| pseudo response regulator [Populus trichocarpa]
Length = 766
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 77/122 (63%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
++VL V++D + V+ LR C YEVT + + A K+L++ N+ DLV+++V MP +
Sbjct: 92 LKVLLVENDDSTRHVVSALLRNCGYEVTAVSNGLQAWKVLQDLTNHIDLVLTEVAMPCLS 151
Query: 84 GFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
G LL + ++PVIM+S++ +V K ++ GA D+L+KP+R ELK +WQHV
Sbjct: 152 GIGLLSKIMSHKTCRNIPVIMMSSHDSMNVVFKCLSKGAVDFLVKPIRKNELKILWQHVW 211
Query: 141 RR 142
R+
Sbjct: 212 RK 213
>gi|297794987|ref|XP_002865378.1| hypothetical protein ARALYDRAFT_494575 [Arabidopsis lyrata subsp.
lyrata]
gi|297311213|gb|EFH41637.1| hypothetical protein ARALYDRAFT_494575 [Arabidopsis lyrata subsp.
lyrata]
Length = 368
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 45/65 (69%), Positives = 54/65 (83%)
Query: 206 DSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRL 265
D+ +KKP+V WTPELHRKFV AV QLGVDKAVP +IL++MNV+ LTR NVASHLQK+R
Sbjct: 123 DNDIKKKPKVDWTPELHRKFVQAVEQLGVDKAVPSRILEIMNVKSLTRHNVASHLQKYRS 182
Query: 266 YLKRL 270
+ K L
Sbjct: 183 HRKHL 187
>gi|170172416|dbj|BAG12976.1| RHYTHM OF CHLOROPLAST 15 [Chlamydomonas reinhardtii]
Length = 631
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 55/67 (82%), Gaps = 2/67 (2%)
Query: 205 EDSTTQ--KKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQK 262
+D TT+ K+PR+VWTP+LHRKF AV +LG DKAVPK I+ MN++GLTRENVASHLQK
Sbjct: 383 DDGTTRAVKRPRLVWTPQLHRKFESAVIKLGEDKAVPKTIMQEMNIDGLTRENVASHLQK 442
Query: 263 FRLYLKR 269
+R+ +R
Sbjct: 443 YRMIKRR 449
>gi|242067499|ref|XP_002449026.1| hypothetical protein SORBIDRAFT_05g003660 [Sorghum bicolor]
gi|241934869|gb|EES08014.1| hypothetical protein SORBIDRAFT_05g003660 [Sorghum bicolor]
Length = 697
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 72/122 (59%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+RVL V+ D + +V+ LR C Y V + A +++R FDLV+++V MP +
Sbjct: 55 LRVLLVEHDDSTRQVVTALLRKCGYRVAAVADGMKAWEVMRGRAYAFDLVLTEVAMPSLS 114
Query: 84 GFKLLEHVGLE---MDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
G +LL + ++PVIM+S+ V+K + GA D+L+KPVR EL+N+WQHV
Sbjct: 115 GIQLLSRIVAADECKNIPVIMMSSQDSIGTVLKCMQKGAVDFLVKPVRKNELRNLWQHVW 174
Query: 141 RR 142
RR
Sbjct: 175 RR 176
>gi|222637749|gb|EEE67881.1| hypothetical protein OsJ_25707 [Oryza sativa Japonica Group]
Length = 661
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 72/122 (59%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
++VL VD D + +V+ LR C YEV A L + +N+ DLV+++V MP +
Sbjct: 61 IKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLTEVVMPGVS 120
Query: 84 GFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
G LL + + ++PVIM+S+ V K ++ GA D+L+KP+R ELKN+WQHV
Sbjct: 121 GISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 180
Query: 141 RR 142
RR
Sbjct: 181 RR 182
>gi|281308384|gb|ADA58340.1| pseudo-response regulator 3 [Brassica rapa]
Length = 492
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 80/128 (62%), Gaps = 6/128 (4%)
Query: 20 FPI-GMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVH 78
P+ ++VL V++D + ++ L+ C YEVT + A K+L + + DLV+++V
Sbjct: 59 LPVRSLKVLLVENDDSTRHIVTALLKNCSYEVTAVPDVLEAWKVLEDENSCIDLVLTEVV 118
Query: 79 MPDMDGF----KLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKN 134
MP G K++ H L+ ++PVIM+S++ LV K +++GA D+L+KP+R ELKN
Sbjct: 119 MPVNSGTGLLSKIMSHQTLK-NIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNELKN 177
Query: 135 IWQHVIRR 142
+WQHV RR
Sbjct: 178 LWQHVWRR 185
>gi|224064372|ref|XP_002301443.1| pseudo response regulator [Populus trichocarpa]
gi|222843169|gb|EEE80716.1| pseudo response regulator [Populus trichocarpa]
Length = 694
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 78/124 (62%), Gaps = 5/124 (4%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+RVL V+ D + +++ LR C Y V+ + A + L+E ++ DL++++V +P +
Sbjct: 44 LRVLLVEADDSTRQIIVALLRKCGYRVSAVPDGLMAWETLKERPHSIDLILTEVELPLIS 103
Query: 84 GFKLLEHVGLEMD----LPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G+ L V +E D +PVIM+S++ +V+K + G+ D+L+KPVR EL+N+WQHV
Sbjct: 104 GYAFLALV-MEHDVCKNIPVIMMSSHDSISVVLKCMLKGSADFLVKPVRKNELRNLWQHV 162
Query: 140 IRRK 143
RR+
Sbjct: 163 WRRQ 166
>gi|449450912|ref|XP_004143206.1| PREDICTED: uncharacterized protein LOC101203812 [Cucumis sativus]
gi|449496718|ref|XP_004160206.1| PREDICTED: uncharacterized protein LOC101226439 [Cucumis sativus]
Length = 297
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 52/99 (52%), Positives = 68/99 (68%), Gaps = 7/99 (7%)
Query: 207 STTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLY 266
+ T K+PR+ WTP+LH++FV V+ LG+ A PK I+ +MNVEGLTRENVASHLQK+RLY
Sbjct: 145 ARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAIMQMMNVEGLTRENVASHLQKYRLY 204
Query: 267 LKR--LSNETPQA--GMVAALGSKDSSYLRIGALDGFGD 301
LKR +S+ T +A M + DSS GA D G+
Sbjct: 205 LKRTQISSTTDEALVPMPVTQNAHDSS---PGAADSHGN 240
>gi|312283377|dbj|BAJ34554.1| unnamed protein product [Thellungiella halophila]
Length = 728
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 74/123 (60%), Gaps = 5/123 (4%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+RVL V++D ++ LR C YEV V A K+L + N+ D+V+++V MP +
Sbjct: 84 IRVLLVENDDCTRYIVTALLRNCSYEVVEVANGVQAWKVLEDLNNHIDIVLTEVVMPYLS 143
Query: 84 GF----KLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G K+L H ++PVIM+S++ LV K ++ GA D+L+KP+R ELK +WQHV
Sbjct: 144 GISLLCKILNHKS-RRNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKILWQHV 202
Query: 140 IRR 142
RR
Sbjct: 203 WRR 205
>gi|302796211|ref|XP_002979868.1| hypothetical protein SELMODRAFT_450936 [Selaginella moellendorffii]
gi|300152628|gb|EFJ19270.1| hypothetical protein SELMODRAFT_450936 [Selaginella moellendorffii]
Length = 865
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 74/122 (60%), Gaps = 5/122 (4%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
++VL V+DD + V+ LR C YEVT + A ++L ++ DLV++D+ MP +
Sbjct: 109 LKVLLVEDDDSTRHVVAALLRNCGYEVTPAASGLQAWEILETRSSSVDLVLTDLMMPRLS 168
Query: 84 GFKLLEHVGLEMD----LPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G +LL + + D +PV+M+S +V+K ++ GA D+L+KPVR ELKN+WQH
Sbjct: 169 GIELLGKI-MSRDSPKRIPVVMMSCLDSMDVVLKCLSKGAVDFLVKPVRKNELKNLWQHF 227
Query: 140 IR 141
R
Sbjct: 228 WR 229
>gi|18414032|ref|NP_568107.1| two-component response regulator-like APRR7 [Arabidopsis thaliana]
gi|52783235|sp|Q93WK5.1|APRR7_ARATH RecName: Full=Two-component response regulator-like APRR7; AltName:
Full=Pseudo-response regulator 7
gi|10281004|dbj|BAB13742.1| pseudo-response regulator 7 [Arabidopsis thaliana]
gi|14532638|gb|AAK64047.1| unknown protein [Arabidopsis thaliana]
gi|23296600|gb|AAN13129.1| unknown protein [Arabidopsis thaliana]
gi|332003137|gb|AED90520.1| two-component response regulator-like APRR7 [Arabidopsis thaliana]
Length = 727
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 75/123 (60%), Gaps = 5/123 (4%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+RVL V++D ++ LR C YEV + + A K+L + N+ D+V+++V MP +
Sbjct: 78 IRVLLVENDDCTRYIVTALLRNCSYEVVEASNGIQAWKVLEDLNNHIDIVLTEVIMPYLS 137
Query: 84 GF----KLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G K+L H ++PVIM+S++ LV K ++ GA D+L+KP+R ELK +WQHV
Sbjct: 138 GIGLLCKILNHKS-RRNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKILWQHV 196
Query: 140 IRR 142
RR
Sbjct: 197 WRR 199
>gi|51571883|dbj|BAD38858.1| pseudo-response regulator 37 [Oryza sativa Indica Group]
Length = 704
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 72/122 (59%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
++VL VD D + +V+ LR C YEV A L + +N+ DLV+++V MP +
Sbjct: 62 IKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLTEVVMPGVS 121
Query: 84 GFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
G LL + + ++PVIM+S+ V K ++ GA D+L+KP+R ELKN+WQHV
Sbjct: 122 GISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 181
Query: 141 RR 142
RR
Sbjct: 182 RR 183
>gi|18420797|ref|NP_568446.1| two-component response regulator-like APRR5 [Arabidopsis thaliana]
gi|10281006|dbj|BAB13743.1| pseudo-response regulator 5 [Arabidopsis thaliana]
gi|332005931|gb|AED93314.1| two-component response regulator-like APRR5 [Arabidopsis thaliana]
Length = 667
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 74/126 (58%), Gaps = 5/126 (3%)
Query: 22 IGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPD 81
I +RVL V+ D + +++ LR C Y V + A +ML+ + DL++++V +P
Sbjct: 157 IALRVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLKAWEMLKGKPESVDLILTEVDLPS 216
Query: 82 MDGFKLLEHVGLEMDL----PVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQ 137
+ G+ LL + +E D+ PVIM+S V K + GA DYL+KP+R EL+N+WQ
Sbjct: 217 ISGYALLTLI-MEHDICKNIPVIMMSTQDSVNTVYKCMLKGAADYLVKPLRRNELRNLWQ 275
Query: 138 HVIRRK 143
HV RR+
Sbjct: 276 HVWRRQ 281
>gi|115474289|ref|NP_001060743.1| Os07g0695100 [Oryza sativa Japonica Group]
gi|122166891|sp|Q0D3B6.1|PRR37_ORYSJ RecName: Full=Two-component response regulator-like PRR37; AltName:
Full=Pseudo-response regulator 37; Short=OsPRR37
gi|34394035|dbj|BAC84066.1| putative pseudo-response regulator [Oryza sativa Japonica Group]
gi|113612279|dbj|BAF22657.1| Os07g0695100 [Oryza sativa Japonica Group]
Length = 742
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 72/122 (59%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
++VL VD D + +V+ LR C YEV A L + +N+ DLV+++V MP +
Sbjct: 62 IKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLTEVVMPGVS 121
Query: 84 GFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
G LL + + ++PVIM+S+ V K ++ GA D+L+KP+R ELKN+WQHV
Sbjct: 122 GISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 181
Query: 141 RR 142
RR
Sbjct: 182 RR 183
>gi|157399680|gb|ABV53464.1| pseudo-response regulator 5 [Castanea sativa]
Length = 698
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 71/118 (60%), Gaps = 3/118 (2%)
Query: 29 VDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDGFKLL 88
++ D + +++ LR C Y VT + A ++LR +N DL++++V +P + GF LL
Sbjct: 67 IEADDSTRQIIGALLRKCSYRVTAVPDGLKAWEILRGRPHNIDLILTEVDLPAISGFALL 126
Query: 89 EHVG---LEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRK 143
+ + ++PVIM+SA V K + GA DYL+KP+R ELKN+WQHV R++
Sbjct: 127 TLIAEHEICKNIPVIMMSAQDSVSTVYKCMLRGAADYLVKPIRRNELKNLWQHVWRKQ 184
>gi|51571877|dbj|BAD38855.1| pseudo-response regulator 37 [Oryza sativa Japonica Group]
Length = 742
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 72/122 (59%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
++VL VD D + +V+ LR C YEV A L + +N+ DLV+++V MP +
Sbjct: 62 IKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLTEVVMPGVS 121
Query: 84 GFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
G LL + + ++PVIM+S+ V K ++ GA D+L+KP+R ELKN+WQHV
Sbjct: 122 GISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 181
Query: 141 RR 142
RR
Sbjct: 182 RR 183
>gi|158513660|sp|A2YQ93.2|PRR37_ORYSI RecName: Full=Two-component response regulator-like PRR37; AltName:
Full=Pseudo-response regulator 37; Short=OsPRR37
Length = 742
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 72/122 (59%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
++VL VD D + +V+ LR C YEV A L + +N+ DLV+++V MP +
Sbjct: 62 IKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLTEVVMPGVS 121
Query: 84 GFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
G LL + + ++PVIM+S+ V K ++ GA D+L+KP+R ELKN+WQHV
Sbjct: 122 GISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 181
Query: 141 RR 142
RR
Sbjct: 182 RR 183
>gi|115480333|ref|NP_001063760.1| Os09g0532400 [Oryza sativa Japonica Group]
gi|68565887|sp|Q689G6.1|PRR95_ORYSJ RecName: Full=Two-component response regulator-like PRR95; AltName:
Full=Pseudo-response regulator 95; Short=OsPRR95
gi|51571881|dbj|BAD38857.1| pseudo-response regulator 95 [Oryza sativa Japonica Group]
gi|52075943|dbj|BAD46023.1| peudo-response regulator-like [Oryza sativa Japonica Group]
gi|52077226|dbj|BAD46270.1| peudo-response regulator-like [Oryza sativa Japonica Group]
gi|113631993|dbj|BAF25674.1| Os09g0532400 [Oryza sativa Japonica Group]
gi|215695172|dbj|BAG90363.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215695375|dbj|BAG90566.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222641971|gb|EEE70103.1| hypothetical protein OsJ_30112 [Oryza sativa Japonica Group]
Length = 623
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 77/131 (58%), Gaps = 7/131 (5%)
Query: 17 IDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISD 76
+ + P+ RVL + D + ++ LR C Y V + V A +L+E N DLV+++
Sbjct: 38 LPRMPV--RVLLAEGDDSTRHIICALLRKCGYRVAAASDGVKAWDILKEKSFNIDLVLTE 95
Query: 77 VHMPDMDGFKLLEHVGLEMD----LPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEEL 132
V +P M GF LL + +E D +PVIM+S+ +V K + GA D+L+KP+R EL
Sbjct: 96 VELPLMSGFLLLSTI-MEHDACKNIPVIMMSSNDSVSMVFKCMLKGAADFLVKPIRKNEL 154
Query: 133 KNIWQHVIRRK 143
+N+WQHV R++
Sbjct: 155 RNLWQHVWRKQ 165
>gi|224128053|ref|XP_002320232.1| pseudo response regulator [Populus trichocarpa]
gi|222861005|gb|EEE98547.1| pseudo response regulator [Populus trichocarpa]
Length = 717
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 96/171 (56%), Gaps = 15/171 (8%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+ VL V+ D + +++ LR C Y V + A + L+ +N DL++++V +P +
Sbjct: 44 LSVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLMAWETLKGGPHNIDLILTEVELPLIS 103
Query: 84 GFKLL----EHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G+ LL EH + ++PVIM+S+ +V+K + GA D+L+KPVR EL+N+WQHV
Sbjct: 104 GYALLTLVTEHAVCK-NIPVIMMSSQDSISMVLKCMLKGAADFLIKPVRKNELRNLWQHV 162
Query: 140 IRRKKV--GPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKD 188
RR+ + G QN + +S + A S G+SD + S+RK KD
Sbjct: 163 WRRQTLSAGQIPQNLHKVEASSEINAA-------SNGSSD-SVMSSRKNKD 205
>gi|15241429|ref|NP_199232.1| protein GOLDEN2-like 2 [Arabidopsis thaliana]
gi|75333752|sp|Q9FFH0.1|GLK2_ARATH RecName: Full=Transcription activator GLK2; AltName: Full=GBF'S
PRO-RICH REGION-INTERACTING factor 2; AltName:
Full=Golden2-like protein 2; Short=AtGLK2
gi|9759520|dbj|BAB10986.1| unnamed protein product [Arabidopsis thaliana]
gi|13311005|gb|AAK16744.1| golden2-like transcription factor [Arabidopsis thaliana]
gi|13432090|gb|AAK20121.1| golden2-like protein 2 [Arabidopsis thaliana]
gi|17221601|dbj|BAB78467.1| GPRI2 [Arabidopsis thaliana]
gi|332007689|gb|AED95072.1| protein GOLDEN2-like 2 [Arabidopsis thaliana]
Length = 386
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 56/67 (83%)
Query: 204 NEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKF 263
++++ +KKP+V WTPELHRKFV AV QLGVDKAVP +IL++MNV+ LTR NVASHLQK+
Sbjct: 139 SDENDIKKKPKVDWTPELHRKFVQAVEQLGVDKAVPSRILEIMNVKSLTRHNVASHLQKY 198
Query: 264 RLYLKRL 270
R + K L
Sbjct: 199 RSHRKHL 205
>gi|224112925|ref|XP_002316333.1| pseudo response regulator [Populus trichocarpa]
gi|222865373|gb|EEF02504.1| pseudo response regulator [Populus trichocarpa]
Length = 763
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 76/122 (62%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
++VL V++D + V+ LR C YE T + A K+L++ N+ DLV+++V MP +
Sbjct: 89 LKVLLVENDDSTRHVVSALLRNCGYEATAVANGLQAWKLLQDLTNHIDLVLTEVAMPCLS 148
Query: 84 GFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
G LL ++ ++PVIM+S++ +V + ++ GA D+L+KP+R ELK +WQHV
Sbjct: 149 GIGLLSNIMSHKTCRNIPVIMMSSHDSMNVVFRCLSKGAVDFLVKPIRKNELKILWQHVW 208
Query: 141 RR 142
RR
Sbjct: 209 RR 210
>gi|218202508|gb|EEC84935.1| hypothetical protein OsI_32150 [Oryza sativa Indica Group]
Length = 623
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 77/131 (58%), Gaps = 7/131 (5%)
Query: 17 IDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISD 76
+ + P+ RVL + D + ++ LR C Y V + V A +L+E N DLV+++
Sbjct: 38 LPRMPV--RVLLAEGDDSTRHIICALLRKCGYRVAAASDGVKAWDILKEKSFNIDLVLTE 95
Query: 77 VHMPDMDGFKLLEHVGLEMD----LPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEEL 132
V +P M GF LL + +E D +PVIM+S+ +V K + GA D+L+KP+R EL
Sbjct: 96 VELPLMSGFLLLSTI-MEHDACKNIPVIMMSSNDSVSMVFKCMLKGAADFLVKPIRKNEL 154
Query: 133 KNIWQHVIRRK 143
+N+WQHV R++
Sbjct: 155 RNLWQHVWRKQ 165
>gi|71067066|dbj|BAE16285.1| SbPCL1 [Sorghum bicolor]
Length = 200
Score = 97.8 bits (242), Expect = 1e-17, Method: Composition-based stats.
Identities = 42/59 (71%), Positives = 51/59 (86%)
Query: 211 KKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKR 269
K+PR+VWTP+LH++FV V LG+ AVPK I+ LMNVEGLTRENVASHLQK+RLY+KR
Sbjct: 142 KRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYVKR 200
>gi|15215715|gb|AAK91403.1| AT5g44190/MLN1_11 [Arabidopsis thaliana]
gi|21700809|gb|AAM70528.1| AT5g44190/MLN1_11 [Arabidopsis thaliana]
Length = 314
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 56/67 (83%)
Query: 204 NEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKF 263
++++ +KKP+V WTPELHRKFV AV QLGVDKAVP +IL++MNV+ LTR NVASHLQK+
Sbjct: 139 SDENDIKKKPKVDWTPELHRKFVQAVEQLGVDKAVPSRILEIMNVKSLTRHNVASHLQKY 198
Query: 264 RLYLKRL 270
R + K L
Sbjct: 199 RSHRKHL 205
>gi|443302655|gb|AGC82269.1| cAMP phosphodiesterase [Acanthamoeba castellanii]
Length = 621
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 91/147 (61%), Gaps = 8/147 (5%)
Query: 21 PIGMRVLAVDDDPTCLKVLENFLRACQY-EVTVTNQAVTALKMLRENRNNFDLVISDVHM 79
P +++L VDD+PT V+ L Y EV V A++++ ENR+ F+LV+ D+HM
Sbjct: 9 PKEIKILVVDDEPTARIVVRKLLEKTGYTEVEVVESGRKAIELI-ENRS-FNLVLCDLHM 66
Query: 80 PDMDGFKLLEHVGLEM---DLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIW 136
PD+DG +++ V + D P++M+SA D +V K ++ GA DYLLKP++ +KN+W
Sbjct: 67 PDIDGIGVVKAVRKKAHMDDSPIVMMSATEDLNIVYKCLSEGADDYLLKPIQANAVKNLW 126
Query: 137 QHVIRRKKVGPKDQNKLLNQENSRVGA 163
Q+V R++K K+ +L+ E ++ A
Sbjct: 127 QNVWRKRK--EKETANMLSHERNKSKA 151
>gi|281308388|gb|ADA58342.1| pseudo-response regulator 7a [Brassica rapa]
Length = 725
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 74/123 (60%), Gaps = 5/123 (4%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+RVL V++D ++ LR C YEV V A K+L + N+ D+V+++V MP +
Sbjct: 95 IRVLLVENDDCTRYIVTALLRNCSYEVVEVANGVQAWKVLEDLNNHIDIVLTEVVMPYLS 154
Query: 84 GF----KLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G K+L H ++PVIM+S++ L+ K ++ GA D+L+KP+R ELK +WQHV
Sbjct: 155 GVGLLCKILNHKS-RRNIPVIMMSSHDSMGLIFKCLSKGAVDFLVKPIRKNELKILWQHV 213
Query: 140 IRR 142
RR
Sbjct: 214 WRR 216
>gi|281308396|gb|ADA58346.1| pseudo-response regulator 7b [Brassica rapa]
Length = 704
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 74/123 (60%), Gaps = 5/123 (4%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+RVL V++D ++ LR C YEV V A K+L + N+ D+V+++V MP +
Sbjct: 74 IRVLLVENDDCTRYIVTALLRNCSYEVVEVANGVQAWKVLEDLNNHIDIVLTEVVMPYLS 133
Query: 84 GF----KLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G K+L H ++PVIM+S++ LV K ++ GA D+L+KP+R ELK +WQHV
Sbjct: 134 GIGLLCKILNHKS-RRNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKILWQHV 192
Query: 140 IRR 142
RR
Sbjct: 193 WRR 195
>gi|218200317|gb|EEC82744.1| hypothetical protein OsI_27455 [Oryza sativa Indica Group]
Length = 507
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 72/122 (59%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
++VL V+ D + +V+ LR C YEV A L + +N+ DLV+++V MP +
Sbjct: 61 IKVLLVESDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLTEVVMPGVS 120
Query: 84 GFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
G LL + + ++PVIM+S+ V K ++ GA D+L+KP+R ELKN+WQHV
Sbjct: 121 GISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 180
Query: 141 RR 142
RR
Sbjct: 181 RR 182
>gi|326522564|dbj|BAK07744.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 759
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 74/130 (56%), Gaps = 5/130 (3%)
Query: 18 DKF-PIG-MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVIS 75
+KF P+ +RVL V++D V+ LR C YEV + A + L + +N DLV++
Sbjct: 75 EKFLPVKTLRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLT 134
Query: 76 DVHMPDMDGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEEL 132
+V MP + G LL + + +PVIM+S V K ++ GA D+L+KP+R EL
Sbjct: 135 EVAMPCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 194
Query: 133 KNIWQHVIRR 142
K +WQH+ RR
Sbjct: 195 KTLWQHIWRR 204
>gi|414879737|tpg|DAA56868.1| TPA: putative MYB DNA-binding domain superfamily protein [Zea mays]
Length = 304
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/78 (57%), Positives = 52/78 (66%)
Query: 191 GDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEG 250
G + ED +KK R+ WTPELH +FV AV LG AVPK I+ LMNVEG
Sbjct: 176 GGKSEDAASASGACRGGRAEKKARIAWTPELHNRFVAAVEHLGDKGAVPKAIVRLMNVEG 235
Query: 251 LTRENVASHLQKFRLYLK 268
LTRENVASHLQK+R+YLK
Sbjct: 236 LTRENVASHLQKYRIYLK 253
>gi|334715201|gb|AEG90656.1| pseudo-response regulator 37 splice variant b [Sorghum bicolor]
Length = 775
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 69/122 (56%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+ VL V+ D +V+ LR C Y+V A L + +NN D+V+ +V MP +
Sbjct: 80 INVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYLEDKQNNIDIVLIEVFMPGVS 139
Query: 84 GFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
G LL + + ++PVIM+S+ V K ++ GA D+L+KP+R ELKN+WQHV
Sbjct: 140 GISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 199
Query: 141 RR 142
RR
Sbjct: 200 RR 201
>gi|334715199|gb|AEG90655.1| pseudo-response regulator 37 splice variant a [Sorghum bicolor]
Length = 761
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 69/122 (56%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+ VL V+ D +V+ LR C Y+V A L + +NN D+V+ +V MP +
Sbjct: 80 INVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYLEDKQNNIDIVLIEVFMPGVS 139
Query: 84 GFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
G LL + + ++PVIM+S+ V K ++ GA D+L+KP+R ELKN+WQHV
Sbjct: 140 GISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 199
Query: 141 RR 142
RR
Sbjct: 200 RR 201
>gi|357512643|ref|XP_003626610.1| Two-component response regulator-like PRR37 [Medicago truncatula]
gi|87240854|gb|ABD32712.1| Response regulator receiver; CCT [Medicago truncatula]
gi|355501625|gb|AES82828.1| Two-component response regulator-like PRR37 [Medicago truncatula]
Length = 636
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 73/128 (57%), Gaps = 9/128 (7%)
Query: 21 PIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMP 80
P +RVL V+ D + ++ LR C Y+V + A + L+ + DLV+++V +P
Sbjct: 11 PTMLRVLLVEPDDSTRHIISALLRNCGYKVAAVRDGLKAWETLKNKSLDIDLVLTEVDLP 70
Query: 81 DMDGFKLLEHVGLEMD------LPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKN 134
+ GF LL + MD +P+IM+S+ V K + +GA D+L+KPVR EL+N
Sbjct: 71 SISGFSLLTQI---MDHHNCKNIPLIMMSSQDSVSTVFKFMLNGAVDFLIKPVRRNELRN 127
Query: 135 IWQHVIRR 142
+WQHV RR
Sbjct: 128 LWQHVWRR 135
>gi|242036083|ref|XP_002465436.1| hypothetical protein SORBIDRAFT_01g038820 [Sorghum bicolor]
gi|241919290|gb|EER92434.1| hypothetical protein SORBIDRAFT_01g038820 [Sorghum bicolor]
Length = 765
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+RV+ V++D + +V+ LR C YEV A + L + +NN DLV+++V MP +
Sbjct: 80 LRVMLVENDDSTRQVVSALLRKCCYEVIPAENGSHAWRYLEDLQNNIDLVLTEVFMPCLS 139
Query: 84 GFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
G LL + + D+PVIM+S+ +V K ++ GA D+L+KP+R ELKN+WQHV
Sbjct: 140 GIGLLSKITSHKICKDIPVIMMSSNDSMSMVFKCLSKGAVDFLVKPLRKNELKNLWQHVW 199
Query: 141 RR 142
RR
Sbjct: 200 RR 201
>gi|334715203|gb|AEG90657.1| pseudo-response regulator 37 splice variant c [Sorghum bicolor]
Length = 759
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 69/122 (56%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+ VL V+ D +V+ LR C Y+V A L + +NN D+V+ +V MP +
Sbjct: 80 INVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYLEDKQNNIDIVLIEVFMPGVS 139
Query: 84 GFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
G LL + + ++PVIM+S+ V K ++ GA D+L+KP+R ELKN+WQHV
Sbjct: 140 GISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 199
Query: 141 RR 142
RR
Sbjct: 200 RR 201
>gi|224121124|ref|XP_002318502.1| pseudo response regulator [Populus trichocarpa]
gi|222859175|gb|EEE96722.1| pseudo response regulator [Populus trichocarpa]
Length = 529
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 80/137 (58%), Gaps = 10/137 (7%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+RVL V+ D + +++ LR C Y V + A ++L+ + DL++++V +P +
Sbjct: 65 LRVLLVEADDSTRQIIAALLRKCSYRVVSVPDGLKAWEILKGRPHGIDLILTEVDLPSIS 124
Query: 84 GFKLL----EHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G+ LL EH + ++PVIM+S+ V K + GA DYL+KP+R EL+N+WQHV
Sbjct: 125 GYPLLTIIMEH-EICKNIPVIMMSSQDSISTVYKCMLRGAADYLVKPLRKNELRNLWQHV 183
Query: 140 IRRKKV-----GPKDQN 151
RR+ GP+D++
Sbjct: 184 WRRQSSLAGGNGPQDES 200
>gi|224131058|ref|XP_002320991.1| response regulator [Populus trichocarpa]
gi|222861764|gb|EEE99306.1| response regulator [Populus trichocarpa]
Length = 144
Score = 96.7 bits (239), Expect = 4e-17, Method: Composition-based stats.
Identities = 42/82 (51%), Positives = 65/82 (79%)
Query: 62 MLRENRNNFDLVISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACD 121
MLRE++N FD++ +D+ M +MDG +LL+ + EMDLPV+++S+ + +LV+KG+ GACD
Sbjct: 1 MLREDKNRFDVLGNDLQMHEMDGIQLLKIIRSEMDLPVVIISSDDEQELVLKGVLQGACD 60
Query: 122 YLLKPVRIEELKNIWQHVIRRK 143
L+KPV++E LK WQHV+R+K
Sbjct: 61 CLIKPVKMEALKVFWQHVVRKK 82
>gi|419193836|gb|AFX68729.1| APRR2-like protein [Solanum lycopersicum]
Length = 560
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 55/67 (82%)
Query: 204 NEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKF 263
N + +KK +V WTPELH+KFV AV QLG+D+A+P +ILDLM VEGLTR NVASHLQK+
Sbjct: 308 NGTKSNRKKIKVDWTPELHKKFVQAVEQLGIDQAIPSRILDLMKVEGLTRHNVASHLQKY 367
Query: 264 RLYLKRL 270
R++ K++
Sbjct: 368 RMHRKQI 374
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 66/135 (48%), Gaps = 2/135 (1%)
Query: 20 FPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM 79
FP G++VL +D+D +++ L Y V AL + F + I +V
Sbjct: 14 FPKGLKVLLLDEDSNSAAEMKSRLEKMDYIVYSFCNESEALTAISSKSEGFHVAIVEVSA 73
Query: 80 PDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
+ DG +L + DLP IM S +MK I GA ++L KP+ ++LKNIWQHV
Sbjct: 74 GNSDG--VLRFLESAKDLPTIMTSNIHSLSTMMKCIALGAVEFLQKPLSDDKLKNIWQHV 131
Query: 140 IRRKKVGPKDQNKLL 154
+ + KD +K L
Sbjct: 132 VHKAFNTRKDVSKSL 146
>gi|308808948|ref|XP_003081784.1| WD40 repeat-containing protein (ISS) [Ostreococcus tauri]
gi|116060250|emb|CAL56309.1| WD40 repeat-containing protein (ISS) [Ostreococcus tauri]
Length = 878
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 74/125 (59%), Gaps = 4/125 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+ VL VDD+ C V + LR C Y VT+ AL++LR F ++++DV MP +D
Sbjct: 30 VHVLVVDDERICRTVTSSLLRRCGYRVTMAESGEEALELLRRG-TEFHMLLTDVMMPGID 88
Query: 84 GFKLLEHVGLE---MDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
G LL+ V + D+PV+M+SA + V + I HGA DYLLKPV +K++W HV
Sbjct: 89 GPALLQIVRNDERLRDMPVVMMSANEHSDTVFRCIQHGAEDYLLKPVSRRAVKHMWTHVW 148
Query: 141 RRKKV 145
R+ +V
Sbjct: 149 RKSQV 153
>gi|414888254|tpg|DAA64268.1| TPA: hypothetical protein ZEAMMB73_417596 [Zea mays]
Length = 177
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 72/123 (58%), Gaps = 3/123 (2%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+ VL V+ D + +V+ LR C Y+V A L + RNN DLV+++V MP +
Sbjct: 51 LNVLLVESDDSTRQVVSALLRCCMYQVISAENGQQAWAYLEDKRNNIDLVLTEVFMPGVS 110
Query: 84 GFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
G LL + + ++PVIM+S+ V K ++ GA D+L+KP+R ELKN+WQHV
Sbjct: 111 GISLLSRIMSHNICKNIPVIMMSSSDAMSTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 170
Query: 141 RRK 143
R++
Sbjct: 171 RQR 173
>gi|297796967|ref|XP_002866368.1| pseudo-response regulator 3 [Arabidopsis lyrata subsp. lyrata]
gi|297312203|gb|EFH42627.1| pseudo-response regulator 3 [Arabidopsis lyrata subsp. lyrata]
Length = 498
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 81/128 (63%), Gaps = 6/128 (4%)
Query: 20 FPI-GMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVH 78
P+ ++VL V++D + ++ L+ C YEV + + A ++L + ++ DLV+++V
Sbjct: 61 LPVRSLKVLLVENDDSTRHIVTALLKNCSYEVNAVSDVLEAWRILEDEKSCIDLVLTEVV 120
Query: 79 MPDMDGF----KLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKN 134
+P G K++ H L+ ++PVIM+S++ LV K +++GA D+L+KP+R ELKN
Sbjct: 121 LPVHSGTGLLSKIMSHKTLK-NIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNELKN 179
Query: 135 IWQHVIRR 142
+WQHV R+
Sbjct: 180 LWQHVWRK 187
>gi|319657093|gb|ADV58925.1| bolting time control 1 [Beta vulgaris subsp. vulgaris]
gi|319657097|gb|ADV58927.1| bolting time control 1 [Beta vulgaris subsp. vulgaris]
gi|319657101|gb|ADV58929.1| bolting time control 1 [Beta vulgaris subsp. vulgaris]
Length = 788
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 75/128 (58%), Gaps = 6/128 (4%)
Query: 20 FPIGM-RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVH 78
P+G +VL V+ D + ++ LR C YEV + A K+L + N DLV+++V
Sbjct: 91 LPVGSPKVLLVESDDSTRHIVSALLRKCSYEVVGVPNGIEAWKILEDLSNQIDLVLTEVV 150
Query: 79 MPDMDGF----KLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKN 134
+ G K++ H + + PVIM+S++ LV+K ++ GA D+L+KP+R ELKN
Sbjct: 151 TSGLSGIGLLSKIMSHKSCQ-NTPVIMMSSHDSMGLVLKCLSKGAVDFLVKPIRKNELKN 209
Query: 135 IWQHVIRR 142
+WQHV RR
Sbjct: 210 LWQHVWRR 217
>gi|51980216|gb|AAU20772.1| timing of CAB expression 1 protein [Castanea sativa]
Length = 545
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 99/193 (51%), Gaps = 11/193 (5%)
Query: 14 DGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLV 73
D ID+ + R+L D+D L+ + L C Y+VT A + L N D++
Sbjct: 24 DAFIDRSKV--RILVCDNDAKSLEEVSTLLLKCSYQVTSVRSARQVIDALNAEGANIDII 81
Query: 74 ISDVHMPDMDGFKLLEHVGLEMDL---PVIMLSAYGDTKLVMKGITHGACDYLLKPVRIE 130
++++ +P G KLL+++ + DL PVIM+SA + +V+K + GA DYL+KP+R
Sbjct: 82 LAELDLPLAKGMKLLKYINRDNDLRRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTN 141
Query: 131 ELKNIWQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTG--NSDQNGKSNRKRKD 188
EL N+W HV RR+++ + +LN + V + ST + D + +S R
Sbjct: 142 ELLNLWTHVWRRRRMLGLAEKNILNYDFDLVASDPSDANTNSTTLFSDDTDDRSCRSTNP 201
Query: 189 QDG----DEDEDG 197
+ G +EDE
Sbjct: 202 EMGLSVHEEDESA 214
>gi|384252785|gb|EIE26260.1| hypothetical protein COCSUDRAFT_64410 [Coccomyxa subellipsoidea
C-169]
Length = 428
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 72/121 (59%), Gaps = 4/121 (3%)
Query: 26 VLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLREN-RNNFDLVISDVHMPDMDG 84
VL +DD L+++E L+ C Y VTV AL +L+ N ++ FDL+++D+ MP +DG
Sbjct: 15 VLLAEDDDLTLRIVEQLLKQCNYRVTVARNGQEALDILQHNDKHCFDLILTDIMMPKVDG 74
Query: 85 FKLLEHVG---LEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIR 141
L+ V + LPVI++S+ + + K T GA DYL+KP+R E+ +W H+ R
Sbjct: 75 MDLVCEVNQRKVWSHLPVIVMSSEQSQEAICKAFTVGAADYLIKPIRKNEVATLWHHIWR 134
Query: 142 R 142
+
Sbjct: 135 K 135
>gi|302813242|ref|XP_002988307.1| hypothetical protein SELMODRAFT_447266 [Selaginella moellendorffii]
gi|300144039|gb|EFJ10726.1| hypothetical protein SELMODRAFT_447266 [Selaginella moellendorffii]
Length = 508
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 78/125 (62%), Gaps = 3/125 (2%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+R+L D D + ++ L C Y+V+V A +++L + DLV+S+V +P+
Sbjct: 14 VRILLCDKDSATAQEVKELLCRCSYQVSVVKTARQVVEVLNITDSKVDLVLSEVELPNGR 73
Query: 84 GFKLLEHVGLEMD---LPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
GFK+L+H+ + +P++M+SA + +V+K + GA DYL+KP+RI EL N+W H+
Sbjct: 74 GFKMLKHIVKSENFKHIPIVMMSARDEMAVVVKCLKLGAADYLVKPLRINELLNLWTHMW 133
Query: 141 RRKKV 145
RR+++
Sbjct: 134 RRRRM 138
>gi|302760961|ref|XP_002963903.1| hypothetical protein SELMODRAFT_438647 [Selaginella moellendorffii]
gi|300169171|gb|EFJ35774.1| hypothetical protein SELMODRAFT_438647 [Selaginella moellendorffii]
Length = 505
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 78/125 (62%), Gaps = 3/125 (2%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+R+L D D + ++ L C Y+V+V A +++L + DLV+S+V +P+
Sbjct: 14 VRILLCDKDSATAQEVKELLCRCSYQVSVVKTARQVVEVLNITDSKVDLVLSEVELPNGR 73
Query: 84 GFKLLEHVGLEMD---LPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
GFK+L+H+ + +P++M+SA + +V+K + GA DYL+KP+RI EL N+W H+
Sbjct: 74 GFKMLKHIVKSENFKHIPIVMMSARDEMAVVVKCLKLGAADYLVKPLRINELLNLWTHMW 133
Query: 141 RRKKV 145
RR+++
Sbjct: 134 RRRRM 138
>gi|145352641|ref|XP_001420647.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580882|gb|ABO98940.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 255
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 43/69 (62%), Positives = 56/69 (81%), Gaps = 2/69 (2%)
Query: 211 KKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKRL 270
K+ R+VWTP+LH +F+ AV +LGV AVPK I+ +MNV+GLTRENVASHLQK+RL LKR
Sbjct: 108 KRQRLVWTPQLHAQFIAAVQKLGVKTAVPKAIMKIMNVKGLTRENVASHLQKYRLTLKRA 167
Query: 271 --SNETPQA 277
S+E+ +A
Sbjct: 168 QDSSESTRA 176
>gi|356495556|ref|XP_003516642.1| PREDICTED: two-component response regulator-like APRR2-like
[Glycine max]
Length = 533
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 76/126 (60%), Gaps = 10/126 (7%)
Query: 147 PKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHEN-- 204
P++ +K L +E G G+ A+S N K+ + D + + G N
Sbjct: 227 PREPDKTLIKEEEDFANGSRGESAVSLS-------PNNKKFLSNADGNTSPNRTGVLNDS 279
Query: 205 -EDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKF 263
E +KK +V WTPELH+KFV AV QLG+D+A+P +IL++M VEGLTR NVASHLQK+
Sbjct: 280 CEIKANRKKMKVDWTPELHKKFVKAVEQLGIDQAIPSRILEIMKVEGLTRHNVASHLQKY 339
Query: 264 RLYLKR 269
R++ ++
Sbjct: 340 RIHKRQ 345
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 63/124 (50%), Gaps = 4/124 (3%)
Query: 20 FPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM 79
FP G+RVL ++ D + + L A Y V+ AL L + F + I +V
Sbjct: 14 FPKGLRVLLLEGDSSSAAEIREQLEAVDYNVSTFYDENEALSALSSSPEGFHVAIVEVST 73
Query: 80 P-DMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQH 138
+ GFK LE+ DLP IM S +MK I GA ++L KP+ ++LKNIWQH
Sbjct: 74 SCSLGGFKFLEN---SKDLPTIMTSKDQCLNTMMKCIALGAVEFLSKPLSEDKLKNIWQH 130
Query: 139 VIRR 142
V+ +
Sbjct: 131 VVHK 134
>gi|170172424|dbj|BAG12980.1| RHYTHM OF CHLOROPLAST 75 [Chlamydomonas reinhardtii]
gi|170172426|dbj|BAG12981.1| RHYTHM OF CHLOROPLAST 75 [Chlamydomonas reinhardtii]
Length = 1705
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 42/62 (67%), Positives = 51/62 (82%)
Query: 211 KKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKRL 270
KKPR+ W+ ELH +F+ A+ QLG+ AVPK IL LMNVEGLTRENVASHLQK+R+ LKR
Sbjct: 1271 KKPRINWSQELHARFLNAMFQLGIKNAVPKTILQLMNVEGLTRENVASHLQKYRILLKRH 1330
Query: 271 SN 272
+N
Sbjct: 1331 AN 1332
>gi|319657095|gb|ADV58926.1| bolting time control 1 [Beta vulgaris subsp. vulgaris]
gi|319657099|gb|ADV58928.1| bolting time control 1 [Beta vulgaris subsp. vulgaris]
gi|319657103|gb|ADV58930.1| bolting time control 1 [Beta vulgaris subsp. vulgaris]
Length = 788
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 75/128 (58%), Gaps = 6/128 (4%)
Query: 20 FPIGM-RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVH 78
P+G +VL V+ D + ++ LR C YEV + A K+L + N DLV+++V
Sbjct: 91 LPVGSPKVLLVESDDSTRHIVSALLRNCSYEVVGVPNGIEAWKILEDLSNQIDLVLTEVV 150
Query: 79 MPDMDGF----KLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKN 134
+ G K++ H + + PVIM+S++ LV+K ++ GA D+L+KP+R ELKN
Sbjct: 151 TSGLSGIGLLSKIMSHKSCQ-NTPVIMMSSHDSMGLVLKCLSKGAVDFLVKPIRKNELKN 209
Query: 135 IWQHVIRR 142
+WQHV RR
Sbjct: 210 LWQHVWRR 217
>gi|357131277|ref|XP_003567265.1| PREDICTED: uncharacterized protein LOC100824981 [Brachypodium
distachyon]
Length = 207
Score = 95.1 bits (235), Expect = 1e-16, Method: Composition-based stats.
Identities = 45/60 (75%), Positives = 50/60 (83%)
Query: 211 KKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKRL 270
KK R+VWT ELHR+FV AV LG AVPK I+ LMNV+GLTRENVASHLQK+RLYLKRL
Sbjct: 100 KKARMVWTTELHRRFVEAVAHLGEKGAVPKAIVRLMNVDGLTRENVASHLQKYRLYLKRL 159
>gi|115441007|ref|NP_001044783.1| Os01g0844900 [Oryza sativa Japonica Group]
gi|113534314|dbj|BAF06697.1| Os01g0844900 [Oryza sativa Japonica Group]
gi|218189362|gb|EEC71789.1| hypothetical protein OsI_04411 [Oryza sativa Indica Group]
gi|222619526|gb|EEE55658.1| hypothetical protein OsJ_04055 [Oryza sativa Japonica Group]
Length = 219
Score = 95.1 bits (235), Expect = 1e-16, Method: Composition-based stats.
Identities = 44/59 (74%), Positives = 49/59 (83%)
Query: 211 KKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKR 269
KK R+VWTPELH +FV AV LG AVPK I+ LMNV+GLTRENVASHLQK+RLYLKR
Sbjct: 105 KKARMVWTPELHHRFVEAVAHLGEKGAVPKAIVRLMNVDGLTRENVASHLQKYRLYLKR 163
>gi|281308394|gb|ADA58345.1| pseudo-response regulator 5b [Brassica rapa]
Length = 628
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 77/133 (57%), Gaps = 12/133 (9%)
Query: 22 IGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTAL-------KMLRENRNNFDLVI 74
I +RVL V+ D + +++ LR C Y V + +V A+ +MLR + DL++
Sbjct: 110 ISLRVLLVEADDSTRQIISALLRKCSYRVFPFHFSVAAVPDGLKAWEMLRGKPESVDLIL 169
Query: 75 SDVHMPDMDGFKLLEHVGLEMDL----PVIMLSAYGDTKLVMKGITHGACDYLLKPVRIE 130
++V +P + G+ LL + +E DL PVIM+S V K + GA DYL+KP+R
Sbjct: 170 TEVDLPSISGYALLTLI-MEHDLCKNIPVIMMSTQDSVNTVYKCMLKGAADYLVKPLRRN 228
Query: 131 ELKNIWQHVIRRK 143
EL+N+WQHV RR+
Sbjct: 229 ELRNLWQHVWRRQ 241
>gi|297796729|ref|XP_002866249.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297312084|gb|EFH42508.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 445
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/89 (57%), Positives = 65/89 (73%), Gaps = 3/89 (3%)
Query: 184 RKRKDQDGD-EDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLG-VDKAVPKK 241
+K+ + D D ++EDG + H +S T+ K R VWT ELH+KFV AV QLG VDKA P++
Sbjct: 18 KKQNEDDSDRKEEDGKGNEHNGMESCTRMK-RTVWTVELHQKFVNAVQQLGGVDKASPEQ 76
Query: 242 ILDLMNVEGLTRENVASHLQKFRLYLKRL 270
I LMNVEGL NVASHLQK+RLYLK++
Sbjct: 77 IHALMNVEGLPVINVASHLQKYRLYLKKI 105
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/61 (63%), Positives = 49/61 (80%), Gaps = 1/61 (1%)
Query: 205 EDSTTQKKPRVVWTPELHRKFVGAVNQLG-VDKAVPKKILDLMNVEGLTRENVASHLQKF 263
E T + RVVW+ ELH+KF+ A++QLG DKA+PKKIL +MNVEGLTR NVA+HLQK+
Sbjct: 333 ESRTRKNHGRVVWSHELHQKFLHAIDQLGGNDKAIPKKILAVMNVEGLTRLNVATHLQKY 392
Query: 264 R 264
R
Sbjct: 393 R 393
>gi|334715191|gb|AEG90651.1| pseudo-response regulator 37 splice variant b [Sorghum bicolor]
Length = 775
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 68/122 (55%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+ VL V+ D +V+ LR C Y+V A L + +NN D+V+ +V MP +
Sbjct: 80 INVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYLEDKQNNIDIVLIEVFMPGVS 139
Query: 84 GFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
G LL + + ++PVIM+S+ V K ++ GA D+L+ P+R ELKN+WQHV
Sbjct: 140 GISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSKGAVDFLVNPIRKNELKNLWQHVW 199
Query: 141 RR 142
RR
Sbjct: 200 RR 201
>gi|334715189|gb|AEG90650.1| pseudo-response regulator 37 splice variant a [Sorghum bicolor]
Length = 761
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 68/122 (55%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+ VL V+ D +V+ LR C Y+V A L + +NN D+V+ +V MP +
Sbjct: 80 INVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYLEDKQNNIDIVLIEVFMPGVS 139
Query: 84 GFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
G LL + + ++PVIM+S+ V K ++ GA D+L+ P+R ELKN+WQHV
Sbjct: 140 GISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSKGAVDFLVNPIRKNELKNLWQHVW 199
Query: 141 RR 142
RR
Sbjct: 200 RR 201
>gi|334715193|gb|AEG90652.1| pseudo-response regulator 37 splice variant c [Sorghum bicolor]
Length = 759
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 68/122 (55%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+ VL V+ D +V+ LR C Y+V A L + +NN D+V+ +V MP +
Sbjct: 80 INVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYLEDKQNNIDIVLIEVFMPGVS 139
Query: 84 GFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
G LL + + ++PVIM+S+ V K ++ GA D+L+ P+R ELKN+WQHV
Sbjct: 140 GISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSKGAVDFLVNPIRKNELKNLWQHVW 199
Query: 141 RR 142
RR
Sbjct: 200 RR 201
>gi|302844239|ref|XP_002953660.1| myb-related transcription factor [Volvox carteri f. nagariensis]
gi|300261069|gb|EFJ45284.1| myb-related transcription factor [Volvox carteri f. nagariensis]
Length = 1004
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/69 (63%), Positives = 53/69 (76%), Gaps = 2/69 (2%)
Query: 203 ENEDSTTQ--KKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHL 260
E D T + KKPR+ W+ ELH +F+ A+ QLG+ AVPK IL LMNVEGLTRENVASHL
Sbjct: 845 EGGDGTCKAPKKPRINWSQELHARFLNAMFQLGIKNAVPKTILQLMNVEGLTRENVASHL 904
Query: 261 QKFRLYLKR 269
QK+R+ LKR
Sbjct: 905 QKYRILLKR 913
>gi|46981318|gb|AAT07636.1| hypothetical protein [Oryza sativa Japonica Group]
gi|51038102|gb|AAT93905.1| hypothetical protein [Oryza sativa Japonica Group]
gi|215769096|dbj|BAH01325.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 620
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 76/131 (58%), Gaps = 8/131 (6%)
Query: 19 KFPIG-----MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLREN-RNNFDL 72
K P G + VL VDDD L+ L+ L Y VT A ALK + +N + F +
Sbjct: 13 KLPAGGFFGRLHVLVVDDDAAYLEELKLMLLLAGYAVTGKTTAEEALKEVDQNPEDYFHI 72
Query: 73 VISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEEL 132
V++DVHM MDGF LL + +PVIM S D +VM+ + +GACDY++KP+ E +
Sbjct: 73 VMTDVHMSGMDGFDLLHRINGR--VPVIMFSEGEDVVMVMRTVMNGACDYMVKPMTSEAI 130
Query: 133 KNIWQHVIRRK 143
K IW+HV+R +
Sbjct: 131 KFIWKHVLRWR 141
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 44/75 (58%), Gaps = 6/75 (8%)
Query: 199 DDGHENEDSTTQKKP---RVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGL--TR 253
D G N ++TT +K R WT H FV A QL D+ PKKI LM ++G+ T+
Sbjct: 248 DRGSNNLEATTGRKKVRTRFTWTTVSHTSFVRAYEQLK-DQEGPKKIKQLMELDGIFVTK 306
Query: 254 ENVASHLQKFRLYLK 268
V+SHLQK+R +L+
Sbjct: 307 TQVSSHLQKYRSWLE 321
>gi|356559647|ref|XP_003548110.1| PREDICTED: two-component response regulator-like PRR95-like
[Glycine max]
Length = 706
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 90/164 (54%), Gaps = 8/164 (4%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+RVL V+ D + +++ LR C + + A + L++ + DL++++V +P +
Sbjct: 32 LRVLLVEADHSTRQIIAALLRKC---IIAVPDGLKAWETLKKKASELDLILTEVELPAIS 88
Query: 84 GFKLLEHVGLEMDL----PVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
GF LL + +E D+ PVIM+S++ + +K + +GA D+L+KP+R EL+N+WQHV
Sbjct: 89 GFALLSLI-MEHDICKSIPVIMMSSHDSVNMALKCMLNGAVDFLIKPIRKNELRNLWQHV 147
Query: 140 IRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSN 183
RR + QN + + + + + S G+ + K+N
Sbjct: 148 WRRHTIITPTQNTTFSPKKLKTASEDNSASNKSNGSVASSKKNN 191
>gi|308809964|ref|XP_003082291.1| ARR1 like protein (ISS) [Ostreococcus tauri]
gi|116060759|emb|CAL57237.1| ARR1 like protein (ISS) [Ostreococcus tauri]
Length = 205
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/60 (68%), Positives = 50/60 (83%)
Query: 210 QKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKR 269
+K+ R+VWTP LH +FV V +LGVD AVPK I+ +MNVEGLTRENVASHLQK+R+ LKR
Sbjct: 73 RKRARLVWTPALHAQFVAPVEKLGVDAAVPKSIMKIMNVEGLTRENVASHLQKYRINLKR 132
>gi|15240235|ref|NP_200946.1| two-component response regulator-like APRR1 [Arabidopsis thaliana]
gi|52783243|sp|Q9LKL2.1|APRR1_ARATH RecName: Full=Two-component response regulator-like APRR1; AltName:
Full=ABI3-interacting protein 1; AltName:
Full=Pseudo-response regulator 1; AltName: Full=Timing
of CAB expression 1
gi|9247020|gb|AAF86252.1|AF272039_1 timing of CAB expression 1 protein [Arabidopsis thaliana]
gi|7576354|dbj|BAA94547.1| pseudo-response regulator 1 [Arabidopsis thaliana]
gi|9757859|dbj|BAB08493.1| pseudo-response regulator 1 [Arabidopsis thaliana]
gi|20453054|gb|AAM19772.1| AT5g61380/mfb13_150 [Arabidopsis thaliana]
gi|29028744|gb|AAO64751.1| At5g61380/mfb13_150 [Arabidopsis thaliana]
gi|332010077|gb|AED97460.1| two-component response regulator-like APRR1 [Arabidopsis thaliana]
Length = 618
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 99/188 (52%), Gaps = 9/188 (4%)
Query: 12 CEDGD--IDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNN 69
C+ GD ID+ + R+L D+D T L + L C Y+VT A + L +
Sbjct: 7 CKGGDGFIDRSRV--RILLCDNDSTSLGEVFTLLSECSYQVTAVKSARQVIDALNAEGPD 64
Query: 70 FDLVISDVHMPDMDGFKLLEHVGLEMDL---PVIMLSAYGDTKLVMKGITHGACDYLLKP 126
D++++++ +P G K+L ++ + DL PVIM+S + +V+K + GA DYL+KP
Sbjct: 65 IDIILAEIDLPMAKGMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAADYLVKP 124
Query: 127 VRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTG--NSDQNGKSNR 184
+R EL N+W H+ RR+++ + +L+ + VG+ + ST + D + +S R
Sbjct: 125 LRTNELLNLWTHMWRRRRMLGLAEKNMLSYDFDLVGSDQSDPNTNSTNLFSDDTDDRSLR 184
Query: 185 KRKDQDGD 192
Q G+
Sbjct: 185 STNPQRGN 192
>gi|222631501|gb|EEE63633.1| hypothetical protein OsJ_18450 [Oryza sativa Japonica Group]
Length = 633
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 76/131 (58%), Gaps = 8/131 (6%)
Query: 19 KFPIG-----MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLREN-RNNFDL 72
K P G + VL VDDD L+ L+ L Y VT A ALK + +N + F +
Sbjct: 13 KLPAGGFFGRLHVLVVDDDAAYLEELKLMLLLAGYAVTGKTTAEEALKEVDQNPEDYFHI 72
Query: 73 VISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEEL 132
V++DVHM MDGF LL + +PVIM S D +VM+ + +GACDY++KP+ E +
Sbjct: 73 VMTDVHMSGMDGFDLLHRINGR--VPVIMFSEGEDVVMVMRTVMNGACDYMVKPMTSEAI 130
Query: 133 KNIWQHVIRRK 143
K IW+HV+R +
Sbjct: 131 KFIWKHVLRWR 141
>gi|125552239|gb|EAY97948.1| hypothetical protein OsI_19866 [Oryza sativa Indica Group]
Length = 604
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 76/131 (58%), Gaps = 8/131 (6%)
Query: 19 KFPIG-----MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLREN-RNNFDL 72
K P G + VL VDDD L+ L+ L Y VT A ALK + +N + F +
Sbjct: 13 KLPAGGFFGRLHVLVVDDDAAYLEELKLMLLLAGYAVTGKTTAEEALKEVDQNPEDYFHI 72
Query: 73 VISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEEL 132
V++DVHM MDGF LL + +PVIM S D +VM+ + +GACDY++KP+ E +
Sbjct: 73 VMTDVHMSGMDGFDLLHRINGR--VPVIMFSEGEDVVMVMRTVMNGACDYMVKPMTSEAI 130
Query: 133 KNIWQHVIRRK 143
K IW+HV+R +
Sbjct: 131 KFIWKHVLRWR 141
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 44/75 (58%), Gaps = 6/75 (8%)
Query: 199 DDGHENEDSTTQKKP---RVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGL--TR 253
D G N ++TT +K R WT H FV A QL D+ PKKI LM ++G+ T+
Sbjct: 248 DRGSNNLEATTGRKKVRTRFTWTTVSHTSFVRAYEQLK-DQEGPKKIKQLMELDGIFVTK 306
Query: 254 ENVASHLQKFRLYLK 268
V+SHLQK+R +L+
Sbjct: 307 TQVSSHLQKYRSWLE 321
>gi|451328694|gb|AGF37241.1| APRR2-like protein, partial [Capsicum annuum]
Length = 505
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/63 (60%), Positives = 54/63 (85%)
Query: 208 TTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYL 267
+ +KK +V WTPELH+KFV AV QLG+D+A+P +ILD+M VEGLTR N+ASHLQK+R++
Sbjct: 312 SNKKKVKVDWTPELHKKFVQAVEQLGIDQAIPSRILDVMKVEGLTRHNIASHLQKYRMHR 371
Query: 268 KRL 270
+++
Sbjct: 372 RQI 374
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 63/123 (51%), Gaps = 2/123 (1%)
Query: 20 FPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM 79
FP G++VL +D+D + +++ L Y V AL + F + I +V
Sbjct: 14 FPKGLKVLLLDEDSSSAAEMKSRLEKMDYIVYTFCNESEALSAISSKSEGFHVAIVEVSA 73
Query: 80 PDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
D DG +L+ + +LP IM S +MK I GA ++L KP+ ++LKNIWQHV
Sbjct: 74 GDNDG--VLQFLESAKNLPTIMTSNIHSLSTMMKCIALGAVEFLQKPLSDDKLKNIWQHV 131
Query: 140 IRR 142
+ +
Sbjct: 132 VHK 134
>gi|449464910|ref|XP_004150172.1| PREDICTED: two-component response regulator-like APRR2-like
[Cucumis sativus]
Length = 560
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/123 (42%), Positives = 73/123 (59%), Gaps = 9/123 (7%)
Query: 149 DQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDST 208
DQ + +ENS G+G + T + D S + + G + G
Sbjct: 259 DQEAIKEEENSADGSGAASNIDLDTHDQDNISSSEKNKSIPCGLSNPCGT--------KI 310
Query: 209 TQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHL-QKFRLYL 267
++KK +V WTPELHRKFV AV QLGV++A+P +IL+LM VEGLTR NVASHL QK+R++
Sbjct: 311 SRKKLKVDWTPELHRKFVQAVEQLGVNQAIPSRILELMKVEGLTRHNVASHLQQKYRMHK 370
Query: 268 KRL 270
+ +
Sbjct: 371 RHI 373
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 63/124 (50%), Gaps = 4/124 (3%)
Query: 20 FPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM 79
FP G+RVL +D D + ++ L +Y V AL + F + I +V
Sbjct: 14 FPKGLRVLLLDGDTSSAAEIKTKLEEMEYVVVTYCNENDALSAISSKPETFHVAIVEVTT 73
Query: 80 PDMDG-FKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQH 138
+ +G FK LE DLP IM+S +MK I GA ++L KP+ ++L+NIWQH
Sbjct: 74 SNHEGNFKFLEAAK---DLPTIMISNIHCLSTMMKCIALGAMEFLQKPLSDDKLRNIWQH 130
Query: 139 VIRR 142
V+ +
Sbjct: 131 VVHK 134
>gi|449513573|ref|XP_004164360.1| PREDICTED: LOW QUALITY PROTEIN: two-component response
regulator-like APRR2-like [Cucumis sativus]
Length = 559
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/123 (42%), Positives = 73/123 (59%), Gaps = 9/123 (7%)
Query: 149 DQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDST 208
DQ + +ENS G+G + T + D S + + G + G
Sbjct: 259 DQEAIKEEENSADGSGAASNIDLDTHDQDNISSSEKNKSIPCGLSNPCGT--------KI 310
Query: 209 TQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHL-QKFRLYL 267
++KK +V WTPELHRKFV AV QLGV++A+P +IL+LM VEGLTR NVASHL QK+R++
Sbjct: 311 SRKKLKVDWTPELHRKFVQAVEQLGVNQAIPSRILELMKVEGLTRHNVASHLQQKYRMHK 370
Query: 268 KRL 270
+ +
Sbjct: 371 RHI 373
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 63/124 (50%), Gaps = 4/124 (3%)
Query: 20 FPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM 79
FP G+RVL +D D + ++ L +Y V AL + F + I +V
Sbjct: 14 FPKGLRVLLLDGDTSSAAEIKTKLEEMEYVVVTYCNENDALSAISSKPETFHVAIVEVTT 73
Query: 80 PDMDG-FKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQH 138
+ +G FK LE DLP IM+S +MK I GA ++L KP+ ++L+NIWQH
Sbjct: 74 SNHEGNFKFLEAAK---DLPTIMISNIHCLSTMMKCIALGAMEFLQKPLSDDKLRNIWQH 130
Query: 139 VIRR 142
V+ +
Sbjct: 131 VVHK 134
>gi|281308382|gb|ADA58339.1| pseudo-response regulator 1a [Brassica rapa]
Length = 576
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 91/177 (51%), Gaps = 5/177 (2%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+R+L D+DP L + L C Y+VT A + L + D++++++ +P
Sbjct: 21 VRILLCDNDPNSLGEVFTLLSQCSYQVTSVKSARQVIDALNAEGPDIDIILAEIDLPMAK 80
Query: 84 GFKLLEHVGLEMDL---PVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
G K+L ++ + DL PVIM+S + +V+K + GA DYL+KP+R EL N+W H+
Sbjct: 81 GMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAADYLVKPLRTNELLNLWTHMW 140
Query: 141 RRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTG--NSDQNGKSNRKRKDQDGDEDE 195
RR+++ + +L+ E VG+ ST + D + +S R Q G E
Sbjct: 141 RRRRMLGLAEKNMLSYEFDLVGSDPSDPNTNSTNLFSDDTDERSIRSTNPQRGSHQE 197
>gi|225427316|ref|XP_002279150.1| PREDICTED: two-component response regulator-like APRR2 [Vitis
vinifera]
gi|297742160|emb|CBI33947.3| unnamed protein product [Vitis vinifera]
Length = 557
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/61 (65%), Positives = 52/61 (85%)
Query: 210 QKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKR 269
+KK +V WTPELH+KFV AV QLGVD+A+P +IL+LM VEGLTR NVASHLQK+R++ +
Sbjct: 314 RKKMKVDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVEGLTRHNVASHLQKYRMHRRH 373
Query: 270 L 270
+
Sbjct: 374 I 374
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 68/134 (50%), Gaps = 6/134 (4%)
Query: 12 CEDGDIDK---FPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRN 68
C D+ + FP G+RVL +DDD T + + L Y V+ AL +
Sbjct: 3 CTANDLQEWKDFPKGLRVLLLDDDTTSAAEIRSKLEEMDYIVSTFCNENEALSAISSKPE 62
Query: 69 NFDLVISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVR 128
+F + I +V + FK LE DLP IM+S+ +MK I GA ++L KP+
Sbjct: 63 SFHVAIVEVSTGNNGSFKFLETAK---DLPTIMISSIHCLSTMMKCIALGAVEFLRKPLS 119
Query: 129 IEELKNIWQHVIRR 142
++L+NIWQHV+ +
Sbjct: 120 EDKLRNIWQHVVHK 133
>gi|307109409|gb|EFN57647.1| hypothetical protein CHLNCDRAFT_142770 [Chlorella variabilis]
Length = 524
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/62 (62%), Positives = 51/62 (82%)
Query: 211 KKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKRL 270
+K R+VWT ELH +F+ A++ LG+ AVPK IL +MNV+G+TRENVASHLQK+RLYL+RL
Sbjct: 203 RKARLVWTQELHNRFINALSHLGLKNAVPKSILAMMNVDGMTRENVASHLQKYRLYLRRL 262
Query: 271 SN 272
Sbjct: 263 GG 264
>gi|297539092|ref|YP_003674861.1| Fis family two component sigma54 specific transcriptional regulator
[Methylotenera versatilis 301]
gi|297258439|gb|ADI30284.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Methylotenera versatilis 301]
Length = 456
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 84/145 (57%), Gaps = 5/145 (3%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
R+LAVDD+P ++LE LR Y+ V AL +LR + N DLV+SD+HMP MDG
Sbjct: 6 RILAVDDEPHMRRLLEISLRQAGYQPVVAENGKEALTILRND--NIDLVVSDLHMPVMDG 63
Query: 85 FKLLEHVGLE-MDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRK 143
KLLE + E +D PVI+++A G+ ++ + GA DY+L+P +E L+ +
Sbjct: 64 LKLLEALRAENIDTPVIIVTAQGEISSAVQAMKLGASDYILRPFDLETLEIAISRALSVT 123
Query: 144 KVGPKDQNKLLNQENSRVGAGEGGQ 168
++ K +N+ L E ++G G+
Sbjct: 124 RL--KVENQFLRDEAGQIGKSLIGE 146
>gi|218192572|gb|EEC74999.1| hypothetical protein OsI_11061 [Oryza sativa Indica Group]
Length = 780
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 75/135 (55%), Gaps = 16/135 (11%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYE-------------VTVTNQAVTALKMLRENRNNF 70
+RVL V++D + +V+ LR C YE V + A + L + +N+
Sbjct: 81 LRVLLVENDDSTRQVVSALLRKCCYEDSRGFCASRFPSAVIPAENGLHAWQCLEDLQNHI 140
Query: 71 DLVISDVHMPDMDGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPV 127
DLV+++V MP + G LL + + D+PVIM+S+ V K ++ GA D+L+KP+
Sbjct: 141 DLVLTEVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPI 200
Query: 128 RIEELKNIWQHVIRR 142
R ELKN+WQHV RR
Sbjct: 201 RKNELKNLWQHVWRR 215
>gi|145351734|ref|XP_001420222.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580455|gb|ABO98515.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 145
Score = 93.2 bits (230), Expect = 4e-16, Method: Composition-based stats.
Identities = 52/124 (41%), Positives = 74/124 (59%), Gaps = 4/124 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+ VL VDD+ C V + LR C Y VT AL++LR F L+++DV MP +D
Sbjct: 23 VHVLVVDDERICRTVTSSLLRKCGYRVTTAESGEEALELLRRG-TEFHLLLTDVMMPGID 81
Query: 84 GFKLLEHVGLE---MDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
G LL+ V + D+PVIM+SA + V + I +GA DYLLKPV + +K++WQHV
Sbjct: 82 GPALLQIVRNDERLRDMPVIMMSANEHSDTVFRCIQYGAEDYLLKPVSRKAVKHMWQHVW 141
Query: 141 RRKK 144
R+ +
Sbjct: 142 RKSQ 145
>gi|334715197|gb|AEG90654.1| pseudo-response regulator 37 splice variant a [Sorghum bicolor]
Length = 291
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 68/122 (55%), Gaps = 3/122 (2%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+ VL V+ D +V+ LR C Y+V A L + +NN D+V+ +V MP +
Sbjct: 80 INVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYLEDKQNNIDIVLIEVFMPGVS 139
Query: 84 GFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
G LL + + ++PVIM+S+ V K ++ GA D+L+ P+R ELKN+WQHV
Sbjct: 140 GISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSKGAVDFLVNPIRKNELKNLWQHVW 199
Query: 141 RR 142
RR
Sbjct: 200 RR 201
>gi|312281707|dbj|BAJ33719.1| unnamed protein product [Thellungiella halophila]
Length = 392
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/61 (68%), Positives = 51/61 (83%)
Query: 210 QKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKR 269
+KK +V WTP+LHRKFV AV QLGVDKAVP +IL++MNV+ LTR NVASHLQK+R + K
Sbjct: 142 KKKTKVDWTPDLHRKFVQAVEQLGVDKAVPSRILEIMNVKSLTRHNVASHLQKYRSHRKH 201
Query: 270 L 270
L
Sbjct: 202 L 202
>gi|7413556|emb|CAB86035.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 72/119 (60%), Gaps = 5/119 (4%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+RVL V++D ++ LR C YEV + + A K+L + N+ D+V+++V MP +
Sbjct: 78 IRVLLVENDDCTRYIVTALLRNCSYEVVEASNGIQAWKVLEDLNNHIDIVLTEVIMPYLS 137
Query: 84 GF----KLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQH 138
G K+L H ++PVIM+S++ LV K ++ GA D+L+KP+R ELK +WQH
Sbjct: 138 GIGLLCKILNHKS-RRNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKILWQH 195
>gi|413934855|gb|AFW69406.1| putative two-component response regulator family protein [Zea mays]
Length = 790
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 111/251 (44%), Gaps = 26/251 (10%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLR---ENRNNFDLVISDVHMP 80
+ L +D DP L + L + V A AL ++ + DLV+ +V++
Sbjct: 5 LSALVLDGDPASLSTISETLAKFNFRVVSFQTAEAALDFIKCGAAKAADLDLVLVEVNLN 64
Query: 81 DMD-----GFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNI 135
+M L H+ E+ +P+ + + D + + K + GAC +LLKP+ +
Sbjct: 65 NMAPGTSANPDLFHHILNELQVPLTAMCSRDDEEALSKCMNLGACFHLLKPLNRRSFSIL 124
Query: 136 WQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDEDE 195
W + K Q LN + ++N S +
Sbjct: 125 WHQALEHKSKKAAPQRPSLNDSTKNRMVSPSTEKPKEVLILERNNLSVPQ---------- 174
Query: 196 DGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDK-AVPKKILDLMNVEGLTRE 254
+G+E +K+ RV WT ELH KF+ AV LG +K A P+KIL LMNV+GLT +
Sbjct: 175 ---SNGYEE----PKKQNRVTWTIELHEKFLEAVEALGGNKSARPEKILHLMNVKGLTVK 227
Query: 255 NVASHLQKFRL 265
++ SHLQK RL
Sbjct: 228 HIGSHLQKHRL 238
>gi|295913129|gb|ADG57826.1| transcription factor [Lycoris longituba]
Length = 207
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 51/57 (89%)
Query: 209 TQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRL 265
+++K +V WTP+LHRKFV AV QLG+D+A+P KIL+LMNVEGLTR N+ASHLQK+R+
Sbjct: 43 SRRKMKVDWTPDLHRKFVQAVEQLGIDQAIPSKILELMNVEGLTRHNIASHLQKYRM 99
>gi|307109141|gb|EFN57379.1| hypothetical protein CHLNCDRAFT_142774 [Chlorella variabilis]
Length = 998
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 78/127 (61%), Gaps = 4/127 (3%)
Query: 21 PIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENR-NNFDLVISDVHM 79
P VL VDD+ VL + L C Y VT + + AL++LR + + F LV++DV M
Sbjct: 45 PSSCHVLLVDDERLTRTVLSSLLLKCGYRVTSASDGLEALRLLRGSAPDTFQLVLTDVCM 104
Query: 80 PDMDGFKLLEHVGLEMDL---PVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIW 136
P+++G +LL V + +L PV+M+S+ + V + + GA +YL+KPV +E+++IW
Sbjct: 105 PELNGIQLLSCVKQDANLRAVPVVMMSSVDQEETVAECVQQGAEEYLVKPVTKKEVQHIW 164
Query: 137 QHVIRRK 143
QHV R++
Sbjct: 165 QHVWRKR 171
>gi|226875203|gb|ACO88949.1| cytokinin B-type response regulator 6 [Vitis vinifera]
Length = 58
Score = 92.0 bits (227), Expect = 9e-16, Method: Composition-based stats.
Identities = 40/58 (68%), Positives = 47/58 (81%)
Query: 35 CLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDGFKLLEHVG 92
CL +LE LR C YEVT N+A TAL +LR N++ FD+VISDVHMPDMDGFKLLEH+G
Sbjct: 1 CLMILEKMLRTCLYEVTKCNRAETALSLLRGNKSGFDIVISDVHMPDMDGFKLLEHIG 58
>gi|422898326|dbj|BAM67029.1| timing of cab expression 1-like [Chrysanthemum seticuspe f.
boreale]
Length = 562
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 88/160 (55%), Gaps = 7/160 (4%)
Query: 1 MTAEERMGSAGCEDGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTAL 60
M E + S G +G ID+ + R+L D+D + + L C Y+VT +
Sbjct: 1 MEPNEILKSGG--EGFIDRSKV--RILLCDNDMKSSVEVYDLLSKCSYQVTPVRSPRQVI 56
Query: 61 KMLRENRNNFDLVISDVHMPDMDGFKLLEHVGLEMDL---PVIMLSAYGDTKLVMKGITH 117
L + D+++S+V +P GFK+L+++ + DL PVIM+SA + +V+K +
Sbjct: 57 DALNVEGPDIDIILSEVDLPMAKGFKMLKYIMRDKDLRRIPVIMMSAQDEVAVVVKCLRL 116
Query: 118 GACDYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQE 157
GA DYL+KP+R EL N+W H+ RR+++ + +LN E
Sbjct: 117 GAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILNCE 156
>gi|356540587|ref|XP_003538769.1| PREDICTED: two-component response regulator-like APRR2-like
[Glycine max]
Length = 570
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 53/65 (81%)
Query: 205 EDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFR 264
E +KK +V WTPELH+KFV AV QLG+D+A+P +IL++M VEGLTR NVASHLQK+R
Sbjct: 306 EIKANRKKVKVDWTPELHKKFVKAVEQLGIDQAIPSRILEIMKVEGLTRHNVASHLQKYR 365
Query: 265 LYLKR 269
++ ++
Sbjct: 366 IHKRQ 370
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 64/124 (51%), Gaps = 4/124 (3%)
Query: 20 FPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM 79
FP G+RVL ++ D + + L A Y+V+ AL L + F + I +V
Sbjct: 14 FPKGLRVLLLEGDSSSAAEIREQLEAMDYKVSTFYDENEALSALSSSPKGFHVAIVEVST 73
Query: 80 P-DMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQH 138
+ GFK LE+ DLP IM S +MK I GA ++L KP+ ++LKNIWQH
Sbjct: 74 SCSLGGFKFLENAK---DLPTIMTSKDQCLNTMMKCIALGAVEFLSKPLSEDKLKNIWQH 130
Query: 139 VIRR 142
V+ +
Sbjct: 131 VVHK 134
>gi|449490377|ref|XP_004158587.1| PREDICTED: transcription activator GLK1-like [Cucumis sativus]
Length = 453
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/68 (61%), Positives = 55/68 (80%)
Query: 203 ENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQK 262
++++S ++K +V WTPELHR+FV AV QLGVDKAVP +IL+LM +E LTR NVASHLQK
Sbjct: 160 QSKNSQGKRKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILELMGIECLTRHNVASHLQK 219
Query: 263 FRLYLKRL 270
+R + K L
Sbjct: 220 YRSHRKHL 227
>gi|356513521|ref|XP_003525462.1| PREDICTED: two-component response regulator-like APRR1-like
[Glycine max]
Length = 559
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 94/183 (51%), Gaps = 7/183 (3%)
Query: 14 DGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLV 73
DG ID+ + R+L D+D + + L C Y+VT A + L D++
Sbjct: 29 DGFIDRSKV--RILLCDNDSKSSEEVFALLLGCSYQVTSVRSARQVIDALNAEGQYIDII 86
Query: 74 ISDVHMPDMDGFKLLEHVGLEMDL---PVIMLSAYGDTKLVMKGITHGACDYLLKPVRIE 130
+++V +P G KLL+++ + +L PVIM+SA + +V+K + GA DYL+KP+R
Sbjct: 87 LAEVDLPIKKGMKLLKYIARDKELCRIPVIMMSAQDEVSIVVKCLRLGAADYLVKPLRTN 146
Query: 131 ELKNIWQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTG--NSDQNGKSNRKRKD 188
EL N+W H+ RR+++ +N +L + V + ST + D + KS R
Sbjct: 147 ELLNLWTHMWRRRRMLGLVENNILTYDFDLVASDPSDANTNSTTLFSDDTDDKSKRSTNP 206
Query: 189 QDG 191
+ G
Sbjct: 207 ETG 209
>gi|356565113|ref|XP_003550789.1| PREDICTED: two-component response regulator-like APRR1-like
[Glycine max]
Length = 565
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 92/176 (52%), Gaps = 7/176 (3%)
Query: 14 DGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLV 73
DG ID+ + R+L D+D + + L C Y+V A + L D++
Sbjct: 29 DGFIDRSKV--RILLCDNDSKSSEEVFTLLLGCSYQVISVRSARQVIDALNAEGQYIDMI 86
Query: 74 ISDVHMPDMDGFKLLEHVGLEMDL---PVIMLSAYGDTKLVMKGITHGACDYLLKPVRIE 130
+++V +P G KLL+++ + +L PVIM+SA + +V+K + GA DYL+KP+R
Sbjct: 87 LAEVDLPIKKGMKLLKYIARDKELCRIPVIMMSAQDEVSIVVKCLRLGAADYLVKPLRTN 146
Query: 131 ELKNIWQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTG--NSDQNGKSNR 184
EL N+W H+ RR+++ +N +LN + V + ST + D + KS R
Sbjct: 147 ELLNLWTHMWRRRRMLGLVENNILNYDFDLVASDPSDANTNSTTLFSDDTDDKSKR 202
>gi|242093588|ref|XP_002437284.1| hypothetical protein SORBIDRAFT_10g024183 [Sorghum bicolor]
gi|241915507|gb|EER88651.1| hypothetical protein SORBIDRAFT_10g024183 [Sorghum bicolor]
Length = 92
Score = 91.7 bits (226), Expect = 1e-15, Method: Composition-based stats.
Identities = 47/84 (55%), Positives = 57/84 (67%), Gaps = 2/84 (2%)
Query: 18 DKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENR--NNFDLVIS 75
D FPIG+ VLAV+DD C KVLE L+ Y + A L MLRE + N FDLVIS
Sbjct: 4 DTFPIGLSVLAVEDDCVCCKVLERKLKYYNYNAIMVMNAQMVLDMLRERKDGNWFDLVIS 63
Query: 76 DVHMPDMDGFKLLEHVGLEMDLPV 99
+V +P+MDGF LL+ +GLEMDLPV
Sbjct: 64 NVIIPNMDGFNLLKLIGLEMDLPV 87
>gi|159487405|ref|XP_001701713.1| predicted protein [Chlamydomonas reinhardtii]
gi|158280932|gb|EDP06688.1| predicted protein [Chlamydomonas reinhardtii]
Length = 61
Score = 91.7 bits (226), Expect = 1e-15, Method: Composition-based stats.
Identities = 41/59 (69%), Positives = 49/59 (83%)
Query: 211 KKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKR 269
KKPR+ W+ ELH +F+ A+ QLG+ AVPK IL LMNVEGLTRENVASHLQK+R+ LKR
Sbjct: 3 KKPRINWSQELHARFLNAMFQLGIKNAVPKTILQLMNVEGLTRENVASHLQKYRILLKR 61
>gi|18399397|ref|NP_565476.1| GBF's pro-rich region-interacting factor 1 [Arabidopsis thaliana]
gi|75337286|sp|Q9SIV3.2|GLK1_ARATH RecName: Full=Transcription activator GLK1; AltName: Full=GBF'S
PRO-RICH REGION-INTERACTING factor 1; AltName:
Full=Golden2-like protein 1; Short=AtGLK1
gi|13311003|gb|AAK16743.1| golden2-like transcription factor [Arabidopsis thaliana]
gi|13432088|gb|AAK20120.1| golden2-like protein 1 [Arabidopsis thaliana]
gi|15451040|gb|AAK96791.1| Unknown protein [Arabidopsis thaliana]
gi|17221599|dbj|BAB78466.1| GPRI1 [Arabidopsis thaliana]
gi|20148313|gb|AAM10047.1| unknown protein [Arabidopsis thaliana]
gi|20198041|gb|AAD21709.2| expressed protein [Arabidopsis thaliana]
gi|20198084|gb|AAM15392.1| expressed protein [Arabidopsis thaliana]
gi|330251936|gb|AEC07030.1| GBF's pro-rich region-interacting factor 1 [Arabidopsis thaliana]
Length = 420
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/116 (45%), Positives = 67/116 (57%), Gaps = 13/116 (11%)
Query: 168 QGAMSTGNSDQNGKSNRKRKDQDGDE-DEDGDDDGHENEDSTT------------QKKPR 214
QG + G+S + + KR D + DGD D S+ ++K +
Sbjct: 96 QGETTKGSSGKGEEVVSKRDDVAAETVTYDGDSDRKRKYSSSASSKNNRISNNEGKRKVK 155
Query: 215 VVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKRL 270
V WTPELHR+FV AV QLGVDKAVP +IL+LM V LTR NVASHLQK+R + K L
Sbjct: 156 VDWTPELHRRFVEAVEQLGVDKAVPSRILELMGVHCLTRHNVASHLQKYRSHRKHL 211
>gi|147794999|emb|CAN71929.1| hypothetical protein VITISV_001044 [Vitis vinifera]
Length = 563
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/61 (63%), Positives = 51/61 (83%)
Query: 210 QKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKR 269
+KK +V W PELH+KFV AV QLGVD+A+P +IL+LM VEGLTR NVASHLQK+R++ +
Sbjct: 320 RKKMKVDWXPELHKKFVQAVEQLGVDQAIPSRILELMKVEGLTRHNVASHLQKYRMHRRH 379
Query: 270 L 270
+
Sbjct: 380 I 380
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 65/142 (45%), Gaps = 16/142 (11%)
Query: 12 CEDGDIDK---FPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRN 68
C D+ + FP G+RVL +DDD T + + L Y V+ AL +
Sbjct: 3 CTANDLQEWKDFPKGLRVLLLDDDTTSAAEIRSKLEEMDYIVSTFCNENEALSAISSKPE 62
Query: 69 NFDLVISDVHMPDMDGFKLLE--------HVGLEMDLPVIMLSAYGDTKLVMKGITHGAC 120
+F + I +V + FK LE G+ L + ++ + + + GA
Sbjct: 63 SFHVAIVEVSTGNNGSFKFLETAKDLPTIRAGMHFLLTISLMDVFDNQMFQL-----GAV 117
Query: 121 DYLLKPVRIEELKNIWQHVIRR 142
++L KP+ ++L+NIWQHV+ +
Sbjct: 118 EFLRKPLSEDKLRNIWQHVVHK 139
>gi|297793691|ref|XP_002864730.1| hypothetical protein ARALYDRAFT_496297 [Arabidopsis lyrata subsp.
lyrata]
gi|297310565|gb|EFH40989.1| hypothetical protein ARALYDRAFT_496297 [Arabidopsis lyrata subsp.
lyrata]
Length = 623
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 83/148 (56%), Gaps = 8/148 (5%)
Query: 12 CEDGD--IDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNN 69
C+ GD ID+ + R+L D+D L + L C Y+VT A + L +
Sbjct: 7 CKGGDGFIDRSRV--RILLCDNDSKSLGEVFTLLSECSYQVTSVKSARQVIDALNAEGPD 64
Query: 70 FDLVISDVHMPDMDGFKLLEHVGLEMDL---PVIMLSAYGDTKLVMKGITHGACDYLLKP 126
D++++++ +P G K+L ++ + DL PVIM+S + +V+K + GA DYL+KP
Sbjct: 65 IDIILAEIDLPMAKGMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAADYLVKP 124
Query: 127 VRIEELKNIWQHVIRRKK-VGPKDQNKL 153
+R EL N+W H+ RR++ +G ++N L
Sbjct: 125 LRTNELLNLWTHMWRRRRMLGLAEKNML 152
>gi|302854384|ref|XP_002958700.1| hypothetical protein VOLCADRAFT_69846 [Volvox carteri f.
nagariensis]
gi|300255940|gb|EFJ40220.1| hypothetical protein VOLCADRAFT_69846 [Volvox carteri f.
nagariensis]
Length = 124
Score = 91.3 bits (225), Expect = 2e-15, Method: Composition-based stats.
Identities = 46/120 (38%), Positives = 71/120 (59%), Gaps = 6/120 (5%)
Query: 26 VLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNN---FDLVISDVHMPDM 82
VL V+DD LK +E LR C Y+VT A+K+L R++ DL+++D+ MP++
Sbjct: 5 VLLVEDDRVTLKTVEQLLRKCNYKVTCAANGREAIKVLTACRHSGVKVDLILTDILMPEV 64
Query: 83 DGFKLLE---HVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
GF L+ H D+PV+++S+ + V++ GA DYL+KP+R EL +WQHV
Sbjct: 65 TGFDLINEVVHGDTFCDVPVVVMSSQDSQENVLQAFQAGAADYLIKPIRKNELATLWQHV 124
>gi|159477193|ref|XP_001696695.1| hypothetical protein CHLREDRAFT_130971 [Chlamydomonas reinhardtii]
gi|158275024|gb|EDP00803.1| predicted protein [Chlamydomonas reinhardtii]
Length = 69
Score = 91.3 bits (225), Expect = 2e-15, Method: Composition-based stats.
Identities = 42/63 (66%), Positives = 53/63 (84%), Gaps = 2/63 (3%)
Query: 205 EDSTTQ--KKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQK 262
+D TT+ K+PR+VWTP+LHRKF AV +LG DKAVPK I+ MN++GLTRENVASHLQK
Sbjct: 7 DDGTTRAVKRPRLVWTPQLHRKFESAVIKLGEDKAVPKTIMQEMNIDGLTRENVASHLQK 66
Query: 263 FRL 265
+R+
Sbjct: 67 YRM 69
>gi|302143340|emb|CBI21901.3| unnamed protein product [Vitis vinifera]
Length = 371
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 57/79 (72%)
Query: 192 DEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGL 251
E E G ++++ ++K +V WTPELHR+FV AV QLGVDKAVP +IL++M ++ L
Sbjct: 74 KEVEKGRKSSAQSKNPQGKRKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILEIMGIDCL 133
Query: 252 TRENVASHLQKFRLYLKRL 270
TR N+ASHLQK+R + K L
Sbjct: 134 TRHNIASHLQKYRSHRKHL 152
>gi|449461539|ref|XP_004148499.1| PREDICTED: two-component response regulator-like APRR2-like
[Cucumis sativus]
gi|449530967|ref|XP_004172463.1| PREDICTED: two-component response regulator-like APRR2-like
[Cucumis sativus]
Length = 521
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/60 (66%), Positives = 48/60 (80%)
Query: 211 KKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKRL 270
KK +V WTPELHR FV AV QLG+D A+P KIL+LM VEGLTR N+ASHLQK+R+ K +
Sbjct: 277 KKTKVDWTPELHRNFVQAVEQLGIDHAIPSKILELMKVEGLTRHNIASHLQKYRMQKKHV 336
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 63/124 (50%), Gaps = 4/124 (3%)
Query: 20 FPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM 79
FP G+RVL +D D + + L +Y V A + NF + I +V
Sbjct: 14 FPKGLRVLLLDRDSFSATEIRSKLEEMEYVVYSCTDEKEASSAILNTPGNFHVAILEVCA 73
Query: 80 PDMD-GFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQH 138
+ D FKLL G DLP+IM S +MK I GA ++LLKP+ ++L+NIWQH
Sbjct: 74 RNYDESFKLL---GASKDLPIIMTSDVHCLSTMMKCIALGAVEFLLKPLSEDKLRNIWQH 130
Query: 139 VIRR 142
VI +
Sbjct: 131 VIHK 134
>gi|357124552|ref|XP_003563963.1| PREDICTED: probable transcription factor GLK1-like [Brachypodium
distachyon]
Length = 474
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 68/122 (55%), Gaps = 23/122 (18%)
Query: 157 ENSRVGAGEGGQGAM--------STGNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDST 208
E+ V GG GA ST +S Q +S K ++S
Sbjct: 141 EDGNVNCNVGGNGAAMEDAKSPCSTASSSQEAESRHKSS---------------RKKNSH 185
Query: 209 TQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLK 268
+KK +V WTPELHR+FV AV QLG+DKAVP +IL++M ++ LTR N+ASHLQK+R + K
Sbjct: 186 GKKKAKVDWTPELHRRFVQAVEQLGIDKAVPSRILEIMGIDSLTRHNIASHLQKYRSHRK 245
Query: 269 RL 270
+
Sbjct: 246 HM 247
>gi|356565422|ref|XP_003550939.1| PREDICTED: two-component response regulator-like APRR2-like
[Glycine max]
Length = 576
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 52/61 (85%)
Query: 210 QKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKR 269
+KK +V WTPELH+KFV AV QLG+D+A+P +IL+LM VE LTR NVASHLQK+R++ ++
Sbjct: 335 RKKIKVDWTPELHKKFVKAVEQLGIDQAIPSRILELMKVESLTRHNVASHLQKYRMHKRQ 394
Query: 270 L 270
+
Sbjct: 395 I 395
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 61/124 (49%), Gaps = 4/124 (3%)
Query: 20 FPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM 79
FP G++VL + D + L A Y V+ AL ++ +F + I +V
Sbjct: 37 FPKGLKVLLHERDNISAAEIRAKLEAMDYNVSTFCDENDALSVISSGLESFHIAIVEVSS 96
Query: 80 PDMDG-FKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQH 138
G FK LE+ DLP IM S +MK I GA ++L KP+ ++L+NIWQH
Sbjct: 97 SSAQGGFKFLENAK---DLPTIMTSNNHCLNTMMKCIALGAVEFLSKPLSEDKLRNIWQH 153
Query: 139 VIRR 142
V+ +
Sbjct: 154 VVHK 157
>gi|381149253|gb|AFF60409.1| golden 2-like 2 transcription factor [Solanum phureja]
Length = 317
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 71/122 (58%), Gaps = 6/122 (4%)
Query: 210 QKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKR 269
++K +V WTPELHRKFV A+ +LGVDKAVP +IL+LM+ GLTR N+ASHLQK+R + K
Sbjct: 90 KRKVKVDWTPELHRKFVKAIEKLGVDKAVPSRILELMSTHGLTRHNIASHLQKYRAHRKH 149
Query: 270 LSNETPQAGMVAALGSKDSSYLRIGALDGFGDLRSLN---SPGRLSSSAISSSYVPGNMF 326
L +A +L K Y + G G +N SP + ++ P +++
Sbjct: 150 LLAREAEA---VSLSHKKQMYSGTAMIGGGGKRILMNPWPSPPTMGFPPMAHHIKPLHVW 206
Query: 327 GR 328
G
Sbjct: 207 GH 208
>gi|6996313|emb|CAB75508.1| ABI3-interacting protein, AIP1 [Arabidopsis thaliana]
Length = 618
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 98/188 (52%), Gaps = 9/188 (4%)
Query: 12 CEDGD--IDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNN 69
C+ GD ID+ + R+L D+D T L + L C Y+VT A + L +
Sbjct: 7 CKGGDGFIDRSRV--RILLCDNDSTSLGEVFTLLSECSYQVTAVKSARQVIDALNAEGPD 64
Query: 70 FDLVISDVHMPDMDGFKLLEHVGLEMDL---PVIMLSAYGDTKLVMKGITHGACDYLLKP 126
D++++++ +P G K+L ++ + DL PVIM+S + +V+K + GA DYL+KP
Sbjct: 65 IDIILAEIDLPMAKGMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAADYLVKP 124
Query: 127 VRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTG--NSDQNGKSNR 184
+ EL N+W H+ RR+++ + +L+ + VG+ + ST + D + +S R
Sbjct: 125 LLTNELLNLWTHMWRRRRMLGLAEKNMLSYDFDLVGSDQSDPNTNSTNLFSDDTDDRSLR 184
Query: 185 KRKDQDGD 192
Q G+
Sbjct: 185 STNPQRGN 192
>gi|255547335|ref|XP_002514725.1| sensory transduction histidine kinase, putative [Ricinus communis]
gi|223546329|gb|EEF47831.1| sensory transduction histidine kinase, putative [Ricinus communis]
Length = 550
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 89/158 (56%), Gaps = 6/158 (3%)
Query: 1 MTAEERMGSAGCEDGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTAL 60
M +E S G +G ID+ + R+L D+D + + L C Y+VT A +
Sbjct: 1 MEGKEPNKSGGGGEGLIDRSKV--RILLCDNDSKSSEEVFTLLLKCSYQVTSVRSARQVI 58
Query: 61 KMLRENRNNFDLVISDVHMPDMDGFKLLEHVGLEMDL---PVIMLSAYGDTKLVMKGITH 117
L + D+++S+V +P G K+L+++ + +L PVIM+SA + +V+K +
Sbjct: 59 DALNAEGPDIDIILSEVDLPMNKGMKMLKYITRDKELRRIPVIMMSAQDEVSIVVKCLRL 118
Query: 118 GACDYLLKPVRIEELKNIWQHVIRRKK-VGPKDQNKLL 154
GA DYL+KP+R EL N+W H+ RR++ +G ++N L+
Sbjct: 119 GAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILI 156
>gi|297812633|ref|XP_002874200.1| hypothetical protein ARALYDRAFT_910487 [Arabidopsis lyrata subsp.
lyrata]
gi|297320037|gb|EFH50459.1| hypothetical protein ARALYDRAFT_910487 [Arabidopsis lyrata subsp.
lyrata]
Length = 556
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 72/126 (57%), Gaps = 8/126 (6%)
Query: 22 IGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPD 81
I +RVL V+ D + +++ LR C Y V + A +ML+ + DL++++V +P
Sbjct: 50 IALRVLLVEADDSTRQIISALLRKCSYRVAAVPDGLKAWEMLKGKPESVDLILTEVDLPS 109
Query: 82 MDGFKLLEHVGLEMD----LPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQ 137
+ G+ LL + +E D +PVI + V K + GA DYL+KP+R EL+N+WQ
Sbjct: 110 ISGYALLTLI-MEHDICKNIPVISTDS---VNTVYKCMLKGAADYLVKPLRRNELRNLWQ 165
Query: 138 HVIRRK 143
HV RR+
Sbjct: 166 HVWRRQ 171
>gi|168011157|ref|XP_001758270.1| predicted protein [Physcomitrella patens subsp. patens]
gi|55669165|gb|AAV54521.1| golden 2-like protein 2 [Physcomitrella patens]
gi|162690726|gb|EDQ77092.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 517
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 62/100 (62%), Gaps = 1/100 (1%)
Query: 210 QKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKR 269
+KK +V WTPELHR+FV AV QLGV+KA P +IL+LM V+ LTR N+ASHLQK+R + +
Sbjct: 224 KKKAKVDWTPELHRRFVHAVEQLGVEKAYPSRILELMGVQCLTRHNIASHLQKYRSHRRH 283
Query: 270 L-SNETPQAGMVAALGSKDSSYLRIGALDGFGDLRSLNSP 308
L + E A + + R DG L +++P
Sbjct: 284 LAAREAEAASWTHRRTYTQAPWPRSSRRDGLPYLVPIHTP 323
>gi|297832658|ref|XP_002884211.1| hypothetical protein ARALYDRAFT_480887 [Arabidopsis lyrata subsp.
lyrata]
gi|297330051|gb|EFH60470.1| hypothetical protein ARALYDRAFT_480887 [Arabidopsis lyrata subsp.
lyrata]
Length = 412
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 61/92 (66%), Gaps = 5/92 (5%)
Query: 179 NGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAV 238
+G S+RKRK ++ +E ++K +V WTPELHR+FV AV QLGVDKAV
Sbjct: 124 DGDSDRKRKYSSSASSKNNRISNNEG-----KRKVKVDWTPELHRRFVEAVEQLGVDKAV 178
Query: 239 PKKILDLMNVEGLTRENVASHLQKFRLYLKRL 270
P +IL+LM V LTR NVASHLQK+R + K L
Sbjct: 179 PSRILELMGVHCLTRHNVASHLQKYRSHRKHL 210
>gi|13940500|gb|AAK50394.1|AF318582_1 putative transcription factor OsGLK2 [Oryza sativa Indica Group]
Length = 430
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 53/66 (80%)
Query: 205 EDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFR 264
++S ++K +V WTPELHR+FV AV QLG+DKAVP +IL+LM +E LTR N+ASHLQK+R
Sbjct: 99 KNSHGKRKVKVDWTPELHRRFVQAVEQLGIDKAVPSRILELMGIECLTRHNIASHLQKYR 158
Query: 265 LYLKRL 270
+ K L
Sbjct: 159 SHRKHL 164
>gi|168059575|ref|XP_001781777.1| predicted protein [Physcomitrella patens subsp. patens]
gi|55669163|gb|AAV54520.1| golden 2-like protein 1 [Physcomitrella patens]
gi|162666779|gb|EDQ53425.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 511
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 61/100 (61%), Gaps = 1/100 (1%)
Query: 210 QKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKR 269
+KK +V WTPELHR+FV AV QLGV+KA P +IL+LM V+ LTR N+ASHLQK+R + +
Sbjct: 220 KKKAKVDWTPELHRRFVHAVEQLGVEKAFPSRILELMGVQCLTRHNIASHLQKYRSHRRH 279
Query: 270 L-SNETPQAGMVAALGSKDSSYLRIGALDGFGDLRSLNSP 308
L + E A + R DG L L++P
Sbjct: 280 LAAREAEAASWTHRRAYTQMPWSRSSRRDGLPYLVPLHTP 319
>gi|302834688|ref|XP_002948906.1| Myb-related transcription factor [Volvox carteri f. nagariensis]
gi|300265651|gb|EFJ49841.1| Myb-related transcription factor [Volvox carteri f. nagariensis]
Length = 2120
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 57/96 (59%), Gaps = 22/96 (22%)
Query: 180 GKSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVP 239
G SN R ++PR++WT ELH +F+ V QLGV+ AVP
Sbjct: 1429 GGSNAAR----------------------VARRPRMLWTHELHCRFMAVVAQLGVETAVP 1466
Query: 240 KKILDLMNVEGLTRENVASHLQKFRLYLKRLSNETP 275
K IL LM V+G+TRENVASHLQK+RLYL+RL+ P
Sbjct: 1467 KNILQLMAVDGMTRENVASHLQKYRLYLRRLAGVPP 1502
>gi|115435568|ref|NP_001042542.1| Os01g0239000 [Oryza sativa Japonica Group]
gi|75321229|sp|Q5NAN5.1|GLK2_ORYSJ RecName: Full=Probable transcription factor GLK2; AltName:
Full=Golden2-like protein 2; Short=OsGLK2
gi|56784113|dbj|BAD81484.1| putative transcription factor OsGLK2 [Oryza sativa Japonica Group]
gi|113532073|dbj|BAF04456.1| Os01g0239000 [Oryza sativa Japonica Group]
gi|215768049|dbj|BAH00278.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 539
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 53/66 (80%)
Query: 205 EDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFR 264
++S ++K +V WTPELHR+FV AV QLG+DKAVP +IL+LM +E LTR N+ASHLQK+R
Sbjct: 208 KNSHGKRKVKVDWTPELHRRFVQAVEQLGIDKAVPSRILELMGIECLTRHNIASHLQKYR 267
Query: 265 LYLKRL 270
+ K L
Sbjct: 268 SHRKHL 273
>gi|90580619|ref|ZP_01236424.1| hypothetical sensory box sensor histidine kinase/response regulator
[Photobacterium angustum S14]
gi|90438277|gb|EAS63463.1| hypothetical sensory box sensor histidine kinase/response regulator
[Photobacterium angustum S14]
Length = 1114
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 84/158 (53%), Gaps = 6/158 (3%)
Query: 7 MGSAGCEDGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLREN 66
+ S CE ++ + P G +L VDD+P L++L NFLR Y V AL ++++
Sbjct: 688 LDSRSCESTNLPENPEGDLILVVDDEPVNLQILNNFLRLAGYRVKTAESGHQALDIVQQQ 747
Query: 67 RNNFDLVISDVHMPDMDGFK---LLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYL 123
R DL++ D+ MP+M G++ LL +LP++MLSA G + +KG GA DYL
Sbjct: 748 RP--DLILLDIMMPEMSGYEVCTLLRKQYSIFELPIMMLSALGQIQDRIKGFECGANDYL 805
Query: 124 LKPVRIEEL-KNIWQHVIRRKKVGPKDQNKLLNQENSR 160
KP EEL I ++ K K +N+ L QE R
Sbjct: 806 TKPFNKEELIARIQAYLQASKTEHEKQKNQSLQQEIHR 843
>gi|424513385|emb|CCO66007.1| predicted protein [Bathycoccus prasinos]
Length = 738
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/52 (73%), Positives = 45/52 (86%)
Query: 214 RVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRL 265
R+VW ELHR+F+ AVN LG+D AVPK I+ +MNVEGLTRENVASHLQK+RL
Sbjct: 508 RLVWNDELHRRFMNAVNHLGLDAAVPKTIMQMMNVEGLTRENVASHLQKYRL 559
>gi|218191182|gb|EEC73609.1| hypothetical protein OsI_08092 [Oryza sativa Indica Group]
Length = 518
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 98/206 (47%), Gaps = 19/206 (9%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+R+L D DP+ + + L C Y+VT + +L D+++++V +P
Sbjct: 28 VRILLCDSDPSSSREVLRLLCNCSYQVTCAKSPRQVINVLNCEAGEIDIILAEVDLPVSK 87
Query: 84 GFKLLEHVGLEMDL---PVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
FK+L+++ +L P+IM+S + +V+K + GA +YL+KP+R+ EL N+W HV
Sbjct: 88 CFKMLKYIARNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLWTHVW 147
Query: 141 RRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDE------D 194
RR+++ + N +N + E SD N S D D+
Sbjct: 148 RRRRMLGLSEKNFFN-DNFELALSEP---------SDANTNSTTLLSDDTDDKPKENINQ 197
Query: 195 EDGDDDGHENEDSTTQKKPRVVWTPE 220
E + HE E + + +P+ TPE
Sbjct: 198 ETSTSNQHEYESNPSDAEPKQKGTPE 223
>gi|356543865|ref|XP_003540379.1| PREDICTED: transcription activator GLK1-like [Glycine max]
Length = 441
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 65/103 (63%), Gaps = 2/103 (1%)
Query: 168 QGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVG 227
+G SD++ N RK+ ++ + N + ++K +V WTPELHR+FV
Sbjct: 128 RGEEIVSKSDESVVMNPSRKE--SEKGRKSSNHAARNNNPQGKRKVKVDWTPELHRRFVQ 185
Query: 228 AVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKRL 270
AV QLGVDKAVP +IL++M ++ LTR N+ASHLQK+R + K L
Sbjct: 186 AVEQLGVDKAVPSRILEIMGIDCLTRHNIASHLQKYRSHRKHL 228
>gi|449442040|ref|XP_004138790.1| PREDICTED: transcription activator GLK1-like [Cucumis sativus]
Length = 455
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/60 (68%), Positives = 49/60 (81%)
Query: 211 KKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKRL 270
+K +V WTPELHR+FV AV QLGVDKAVP +IL+LM +E LTR NVASHLQK+R + K L
Sbjct: 170 RKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILELMGIECLTRHNVASHLQKYRSHRKHL 229
>gi|357482307|ref|XP_003611439.1| Two-component response regulator-like protein [Medicago truncatula]
gi|355512774|gb|AES94397.1| Two-component response regulator-like protein [Medicago truncatula]
Length = 543
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 54/66 (81%)
Query: 205 EDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFR 264
E+ +KK +V WT ELH+KFV AV QLG+D+A+P +IL+LM V+GLTR NVASHLQK+R
Sbjct: 304 ENKANRKKMKVDWTAELHKKFVKAVEQLGIDQAIPSRILELMKVDGLTRHNVASHLQKYR 363
Query: 265 LYLKRL 270
++ +++
Sbjct: 364 MHKRQI 369
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 64/125 (51%), Gaps = 6/125 (4%)
Query: 20 FPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM 79
FP G+RVL ++ D + L + Y V+ AL + + F + I +V +
Sbjct: 14 FPKGLRVLLLEGDNNSASEIRTKLESMDYNVSTFYNENEALSAISSSPKCFHVAIVEVSI 73
Query: 80 --PDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQ 137
PD GFK LE+ DLP IM S +MK I GA ++L KP+ ++LKNIWQ
Sbjct: 74 SCPD-GGFKFLENAK---DLPTIMTSNSQCINTMMKCIALGAVEFLTKPLSEDKLKNIWQ 129
Query: 138 HVIRR 142
HV+ +
Sbjct: 130 HVVHK 134
>gi|224095575|ref|XP_002310413.1| predicted protein [Populus trichocarpa]
gi|222853316|gb|EEE90863.1| predicted protein [Populus trichocarpa]
Length = 328
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 54/68 (79%)
Query: 203 ENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQK 262
+N ++ ++K +V WTPELHR+FV AV QLGVDKAVP +IL+LM ++ LTR N+ASHLQK
Sbjct: 149 KNNNNQGKRKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILELMGIDCLTRHNIASHLQK 208
Query: 263 FRLYLKRL 270
+R + K L
Sbjct: 209 YRSHRKHL 216
>gi|115447337|ref|NP_001047448.1| Os02g0618200 [Oryza sativa Japonica Group]
gi|68565719|sp|Q689G9.2|PRR1_ORYSJ RecName: Full=Two-component response regulator-like PRR1; AltName:
Full=Pseudo-response regulator 1; Short=OsPRR1
gi|47847546|dbj|BAD21598.1| putative timing of CAB expression 1 [Oryza sativa Japonica Group]
gi|47847675|dbj|BAD21456.1| putative timing of CAB expression 1 [Oryza sativa Japonica Group]
gi|113536979|dbj|BAF09362.1| Os02g0618200 [Oryza sativa Japonica Group]
gi|222623253|gb|EEE57385.1| hypothetical protein OsJ_07546 [Oryza sativa Japonica Group]
Length = 518
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 98/206 (47%), Gaps = 19/206 (9%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+R+L D DP+ + + L C Y+VT + +L D+++++V +P
Sbjct: 28 VRILLCDSDPSSSREVLRLLCNCSYQVTCAKSPRQVINVLNCEAGEIDIILAEVDLPVSK 87
Query: 84 GFKLLEHVGLEMDL---PVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
FK+L+++ +L P+IM+S + +V+K + GA +YL+KP+R+ EL N+W HV
Sbjct: 88 CFKMLKYIARNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLWTHVW 147
Query: 141 RRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDE------D 194
RR+++ + N +N + E SD N S D D+
Sbjct: 148 RRRRMLGLSEKNFFN-DNFELALSEP---------SDANTNSTTLLSDDTDDKPKENINQ 197
Query: 195 EDGDDDGHENEDSTTQKKPRVVWTPE 220
E + HE E + + +P+ TPE
Sbjct: 198 ETSTSNQHEYESNPSDAEPKQKGTPE 223
>gi|403374229|gb|EJY87054.1| Protein kinase domain containing protein [Oxytricha trifallax]
Length = 834
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 82/162 (50%), Gaps = 10/162 (6%)
Query: 26 VLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDGF 85
+L +D+ L + L C YEVT AL LR+ FDLV+ D++MP+MDGF
Sbjct: 9 ILLAEDEQFQRLALYDILELCDYEVTTVENGKKALVELRDETREFDLVLLDLYMPEMDGF 68
Query: 86 KLL------EHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
+LL E + L LPV+++SA GD ++ + GA DYL+KPVR +E K + +H+
Sbjct: 69 ELLTLMQEDEKLSL---LPVVVMSADGDKDIIANCLRMGAKDYLVKPVRFQECKGLVRHM 125
Query: 140 IRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGK 181
K + L E R G G G + S +G+
Sbjct: 126 SVTASSADKSEKGLHKYEKIRYVDG-GATGQIDLVRSKHDGE 166
>gi|351722597|ref|NP_001235202.1| timing of CAB expression 1 [Glycine max]
gi|158999372|gb|ABW87010.1| timing of CAB expression 1 [Glycine max]
Length = 558
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 82/145 (56%), Gaps = 5/145 (3%)
Query: 14 DGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLV 73
DG ID+ + R+L D+D + + L C Y+VT A + L + D++
Sbjct: 20 DGFIDRSKV--RILLCDNDSKSSQEVFTLLLRCSYQVTSVKSARQVIDALNAEGQHIDII 77
Query: 74 ISDVHMPDMDGFKLLEHVGLEMD---LPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIE 130
++++ +P G K+L+++ + + +PVIM+SA + +V+K + GA DYL+KP+R
Sbjct: 78 LAELDLPMKKGMKMLKYIARDKEFRRIPVIMMSAQDEVSIVVKCLRLGAADYLVKPLRTN 137
Query: 131 ELKNIWQHVIRRKKVGPKDQNKLLN 155
EL N+W H+ RR+++ + +LN
Sbjct: 138 ELLNLWTHMWRRRRMLGLVEKNILN 162
>gi|124003289|ref|ZP_01688139.1| two-component hybrid sensor and regulator [Microscilla marina ATCC
23134]
gi|123991387|gb|EAY30818.1| two-component hybrid sensor and regulator [Microscilla marina ATCC
23134]
Length = 1269
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 76/123 (61%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+++L VDD+P L+VLEN L Y +T + + ALK+++E++ FD+++ DV MP M
Sbjct: 885 VKILVVDDEPVNLQVLENHLSIQNYNITQASDGLKALKIIKESKEPFDIILLDVMMPKMS 944
Query: 84 GFKLLEHVGLE---MDLPVIMLSAYGDTKLVMKGITHGACDYLLKPV-RIEELKNIWQHV 139
G+++ + ++LPV+ML+A K +++G GA DYL KP ++E L I HV
Sbjct: 945 GYEVCRTIRERFPLVELPVLMLTAKNQPKDIVEGFDAGANDYLTKPFSKVELLSRIKTHV 1004
Query: 140 IRR 142
+ +
Sbjct: 1005 LLK 1007
>gi|51571875|dbj|BAD38854.1| pseudo-response regulator 1 [Oryza sativa Japonica Group]
Length = 518
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 98/206 (47%), Gaps = 19/206 (9%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+R+L D DP+ + + L C Y+VT + +L D+++++V +P
Sbjct: 28 VRILLCDSDPSSSREVLRLLCNCSYQVTCAKSPRQVINVLNCEAGEIDIILAEVDLPVSK 87
Query: 84 GFKLLEHVGLEMDL---PVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
FK+L+++ +L P+IM+S + +V+K + GA +YL+KP+R+ EL N+W HV
Sbjct: 88 CFKMLKYIARNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLWTHVW 147
Query: 141 RRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDE------D 194
RR+++ + N +N + E SD N S D D+
Sbjct: 148 RRRRMLGLSEKNFFN-DNFELALSEP---------SDANTNSTTLLSDDTDDKPKENINQ 197
Query: 195 EDGDDDGHENEDSTTQKKPRVVWTPE 220
E + HE E + + +P+ TPE
Sbjct: 198 ETSTSNQHEYESNPSDAEPKQKGTPE 223
>gi|90413136|ref|ZP_01221132.1| hypothetical sensory box sensor histidine kinase/response regulator
[Photobacterium profundum 3TCK]
gi|90325827|gb|EAS42279.1| hypothetical sensory box sensor histidine kinase/response regulator
[Photobacterium profundum 3TCK]
Length = 1117
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 87/161 (54%), Gaps = 8/161 (4%)
Query: 12 CEDGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFD 71
CE+ ++ + P G +L VDD+P L+VL NFLR Y V + ALK++ + +
Sbjct: 697 CENENLPENPDGELLLVVDDEPVNLQVLNNFLRLEGYRVLTADSGPQALKIIEQQQP--A 754
Query: 72 LVISDVHMPDMDGFKLLEHVGLE----MDLPVIMLSAYGDTKLVMKGITHGACDYLLKPV 127
L++ D+ MP+M G+++ H+ E ++LP+IMLSA G + +KG GA DYL KP
Sbjct: 755 LILLDIMMPEMSGYEVC-HILREEHSLIELPIIMLSALGQVQDRIKGFESGANDYLTKPF 813
Query: 128 RIEEL-KNIWQHVIRRKKVGPKDQNKLLNQENSRVGAGEGG 167
EEL I H+ K + +N L QE R E G
Sbjct: 814 NKEELIARISAHLQAGKTEVQRQKNAALQQEIHRREQVEVG 854
>gi|302847255|ref|XP_002955162.1| hypothetical protein VOLCADRAFT_49095 [Volvox carteri f.
nagariensis]
gi|300259454|gb|EFJ43681.1| hypothetical protein VOLCADRAFT_49095 [Volvox carteri f.
nagariensis]
Length = 61
Score = 89.4 bits (220), Expect = 6e-15, Method: Composition-based stats.
Identities = 37/59 (62%), Positives = 50/59 (84%)
Query: 211 KKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKR 269
K+PR+VWTP+LH+KF AV +LG +KAVPK I+ MN++GLTRENVASHLQK+R+ ++
Sbjct: 3 KRPRLVWTPQLHKKFESAVQKLGTEKAVPKNIMQEMNIDGLTRENVASHLQKYRMLRRK 61
>gi|381149243|gb|AFF60404.1| golden 2-like 1 transcription factor [Solanum lycopersicum]
gi|391868374|gb|AFM44934.1| golden1-like protein [Solanum lycopersicum]
Length = 464
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 74/118 (62%), Gaps = 8/118 (6%)
Query: 161 VGAGEGGQGAMSTGN------SDQNGKSNRKRKDQD--GDEDEDGDDDGHENEDSTTQKK 212
V A + G G ++ N S Q + + ++++Q+ ++ D +N + ++K
Sbjct: 117 VSASDVGSGLTTSLNQGEEIVSTQKSEESTQQRNQNIVTPKESDKGKKSSKNHNLPGKRK 176
Query: 213 PRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKRL 270
+V WTPELHR+FV AV QLGVDKAVP +IL++M ++ LTR N+ASHLQK+R + K L
Sbjct: 177 VKVDWTPELHRRFVQAVEQLGVDKAVPSRILEIMGIDCLTRHNIASHLQKYRSHRKHL 234
>gi|242051445|ref|XP_002454868.1| hypothetical protein SORBIDRAFT_03g000400 [Sorghum bicolor]
gi|241926843|gb|EER99987.1| hypothetical protein SORBIDRAFT_03g000400 [Sorghum bicolor]
Length = 497
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 52/70 (74%)
Query: 212 KPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKRLS 271
K +V WTPELHR+FV AV QLG+DKAVP +IL++M ++ LTR N+ASHLQK+R + K L
Sbjct: 196 KRKVDWTPELHRRFVQAVEQLGIDKAVPSRILEIMGMDCLTRHNIASHLQKYRSHRKHLM 255
Query: 272 NETPQAGMVA 281
P+A A
Sbjct: 256 AREPEAATWA 265
>gi|242092550|ref|XP_002436765.1| hypothetical protein SORBIDRAFT_10g008400 [Sorghum bicolor]
gi|241914988|gb|EER88132.1| hypothetical protein SORBIDRAFT_10g008400 [Sorghum bicolor]
Length = 466
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 53/67 (79%)
Query: 204 NEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKF 263
N+ S +KK +V WTP+LHR+FV AV QLG+DKAVP +IL++M ++ LTR N+ASHLQK+
Sbjct: 181 NKHSHGKKKAKVDWTPDLHRRFVQAVEQLGIDKAVPSRILEIMGIDSLTRHNIASHLQKY 240
Query: 264 RLYLKRL 270
R + K +
Sbjct: 241 RSHRKHM 247
>gi|381149247|gb|AFF60406.1| golden 2-like 2 transcription factor [Capsicum annuum]
Length = 312
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 40/61 (65%), Positives = 50/61 (81%)
Query: 210 QKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKR 269
+KK +V WTPELHR+FV AV +LGVDKAVP +IL+LM +GLTR N+ASHLQK+R + K
Sbjct: 92 KKKVKVDWTPELHRRFVKAVEKLGVDKAVPSRILELMATDGLTRHNIASHLQKYRAHRKH 151
Query: 270 L 270
L
Sbjct: 152 L 152
>gi|449486993|ref|XP_004157464.1| PREDICTED: LOW QUALITY PROTEIN: two-component response
regulator-like APRR1-like [Cucumis sativus]
Length = 557
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 99/204 (48%), Gaps = 16/204 (7%)
Query: 8 GSAGCEDGD--IDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRE 65
GS G GD ID+ + R+L D+D + + L C Y+V + A + L
Sbjct: 16 GSGGKNXGDGFIDRSKV--RILLCDNDSKSSEEVFKLLLKCSYQVISVSSARQVIDALNA 73
Query: 66 NRNNFDLVISDVHMPDMDGFKLLEHVGLEMDL---PVIMLSAYGDTKLVMKGITHGACDY 122
D+++S+V +P G K+L+++ + +L PVIM+S + +V+K + GA DY
Sbjct: 74 EGPEIDIILSEVDLPMAKGMKMLKYITRDKELRRIPVIMMSTQDEVPIVVKCLRLGAADY 133
Query: 123 LLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTG--NSDQNG 180
L+KP+R EL N+W H+ RR++ + +LN E V + ST + D +
Sbjct: 134 LVKPLRTNELLNLWTHMWRRRRTLGLAEKNILNYEFDLVASDPSDANTNSTTLFSDDTDD 193
Query: 181 KSNRKRKDQDG-------DEDEDG 197
KS R + G EDE G
Sbjct: 194 KSRRSTNPEMGITAPATHQEDEPG 217
>gi|118722731|gb|ABL10089.1| golden 2-like protein [Triticum aestivum]
Length = 461
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 53/67 (79%)
Query: 204 NEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKF 263
+++S +KK +V WTPELHR+FV AV QLG+DKAVP +IL++M + LTR N+ASHLQK+
Sbjct: 173 SKNSHGKKKAKVDWTPELHRRFVQAVEQLGIDKAVPSRILEIMGINSLTRHNIASHLQKY 232
Query: 264 RLYLKRL 270
R + K +
Sbjct: 233 RSHRKHM 239
>gi|225446455|ref|XP_002275230.1| PREDICTED: transcription activator GLK1-like [Vitis vinifera]
Length = 432
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 57/78 (73%)
Query: 193 EDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLT 252
E E G ++++ ++K +V WTPELHR+FV AV QLGVDKAVP +IL++M ++ LT
Sbjct: 136 EVEKGRKSSAQSKNPQGKRKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILEIMGIDCLT 195
Query: 253 RENVASHLQKFRLYLKRL 270
R N+ASHLQK+R + K L
Sbjct: 196 RHNIASHLQKYRSHRKHL 213
>gi|34499879|gb|AAQ73525.1| timing of CAB expression 1 [Mesembryanthemum crystallinum]
Length = 544
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 72/125 (57%), Gaps = 3/125 (2%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+R+L D+D + + L C Y+VT A + L + D+++S+V +P
Sbjct: 29 VRILLCDNDSKSCEEVFGLLSNCSYQVTAVRSARQVIDALNAEGPDIDIILSEVDLPTKK 88
Query: 84 GFKLLEHVGLEMDL---PVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
G K+L+++ + DL PVIM+S + LV+K + GA DYL+KP+R E+ N+W H+
Sbjct: 89 GLKMLKYIMRDRDLQRIPVIMMSTQDEVSLVVKCLRLGAADYLVKPLRTNEMLNLWTHMW 148
Query: 141 RRKKV 145
RR+++
Sbjct: 149 RRRQM 153
>gi|54307731|ref|YP_128751.1| sensory box sensor histidine kinase/response regulator
[Photobacterium profundum SS9]
gi|46912154|emb|CAG18949.1| hypothetical sensory box sensor histidine kinase/response regulator
[Photobacterium profundum SS9]
Length = 1131
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 86/161 (53%), Gaps = 8/161 (4%)
Query: 12 CEDGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFD 71
CE ++ + P G +L VDD+P L+VL NFLR Y V + ALK++ + +
Sbjct: 711 CETENLPENPDGELLLVVDDEPVNLQVLNNFLRLEGYRVLTADSGPQALKIIEQQQP--A 768
Query: 72 LVISDVHMPDMDGFKLLEHVGLE----MDLPVIMLSAYGDTKLVMKGITHGACDYLLKPV 127
L++ D+ MP+M G+++ H+ E ++LP+IMLSA G + +KG GA DYL KP
Sbjct: 769 LILLDIMMPEMSGYEVC-HILREEYSLIELPIIMLSALGQVQDRIKGFESGANDYLTKPF 827
Query: 128 RIEEL-KNIWQHVIRRKKVGPKDQNKLLNQENSRVGAGEGG 167
EEL I H+ K + +N L QE R E G
Sbjct: 828 NKEELIARISAHLQAGKTEVQRQKNAALQQEIHRREQVEVG 868
>gi|449015491|dbj|BAM78893.1| MYB-related protein [Cyanidioschyzon merolae strain 10D]
Length = 798
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 57/77 (74%)
Query: 197 GDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENV 256
G + G + ++ +K R+VWTP+LH +FV AVN +GVD+A+PK ++ LMNVEGLT E+V
Sbjct: 499 GAESGKLADSASIMRKRRLVWTPQLHERFVKAVNLIGVDQAMPKILVSLMNVEGLTPEHV 558
Query: 257 ASHLQKFRLYLKRLSNE 273
SHLQK+R L+R +E
Sbjct: 559 KSHLQKYRRNLRRAKSE 575
>gi|357474449|ref|XP_003607509.1| Two-component response regulator-like APRR2 [Medicago truncatula]
gi|355508564|gb|AES89706.1| Two-component response regulator-like APRR2 [Medicago truncatula]
Length = 442
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 50/61 (81%)
Query: 210 QKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKR 269
++K +V WTPELHR+FV AV QLGVDKAVP +IL++M ++ LTR N+ASHLQK+R + K
Sbjct: 174 KRKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILEIMGIDSLTRHNIASHLQKYRSHRKH 233
Query: 270 L 270
L
Sbjct: 234 L 234
>gi|303271521|ref|XP_003055122.1| response regulator receiver/WD40 domain fusion protein [Micromonas
pusilla CCMP1545]
gi|226463096|gb|EEH60374.1| response regulator receiver/WD40 domain fusion protein [Micromonas
pusilla CCMP1545]
Length = 1334
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 72/124 (58%), Gaps = 12/124 (9%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+ VL VDD LR CQY+VT + A+ +L E F+L+++DV MPD+D
Sbjct: 10 VHVLLVDD--------AGLLRRCQYQVTTASSGREAMALL-ERGTQFNLLLTDVMMPDVD 60
Query: 84 GFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
G LL V L ++PV+M+S+ +VM I GA DY++KPV + +K++W HV
Sbjct: 61 GPTLLHFVRNNPLYAEMPVVMMSSNEHADMVMNCIRLGAEDYIIKPVTNKAVKHMWAHVW 120
Query: 141 RRKK 144
RRK+
Sbjct: 121 RRKQ 124
>gi|391868155|gb|AFM44933.1| golden2-like protein [Solanum lycopersicum]
gi|395629268|gb|AFN69447.1| golden 2-like 2 transcription factor [Solanum lycopersicum]
Length = 310
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/61 (63%), Positives = 49/61 (80%)
Query: 210 QKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKR 269
+KK ++ WTPELHRKFV A+ +LGVDKAVP +IL+LM GLTR N+ASHLQK+R + K
Sbjct: 83 KKKVKLDWTPELHRKFVKAIEKLGVDKAVPSRILELMATHGLTRHNIASHLQKYRAHRKH 142
Query: 270 L 270
L
Sbjct: 143 L 143
>gi|384246638|gb|EIE20127.1| hypothetical protein COCSUDRAFT_57853 [Coccomyxa subellipsoidea
C-169]
Length = 402
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 69/120 (57%), Gaps = 25/120 (20%)
Query: 174 GNSDQNGKSNRKRKDQDGDE-DEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQL 232
G+ G ++ KR Q+G + G+DD EN+ + K+PR+VWT +LH+ FV AV QL
Sbjct: 201 GDPQGMGATSSKRNQQEGPKATSTGEDDADENQ-ARALKRPRLVWTAKLHQCFVQAVEQL 259
Query: 233 GVDKAVPKKILD-----------------------LMNVEGLTRENVASHLQKFRLYLKR 269
G+ AVPK I+ LM+V+GLTRENVASHLQK+RL LK+
Sbjct: 260 GLKNAVPKTIMQACFPTSATRLHPLSCPLQSVLAPLMHVDGLTRENVASHLQKYRLQLKK 319
>gi|224126555|ref|XP_002329583.1| predicted protein [Populus trichocarpa]
gi|222870292|gb|EEF07423.1| predicted protein [Populus trichocarpa]
Length = 549
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 58/92 (63%)
Query: 174 GNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLG 233
S+ N N + KD ++ D N +KK +V WTPELH+KFV V +LG
Sbjct: 271 AKSENNIHPNPQNKDSLNHSNDVASDLHTSNGTRANRKKMKVDWTPELHKKFVQVVEKLG 330
Query: 234 VDKAVPKKILDLMNVEGLTRENVASHLQKFRL 265
VD+A+P ++L+LM VE LTR NVASHLQK+R+
Sbjct: 331 VDQAIPSRVLELMKVESLTRHNVASHLQKYRM 362
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 64/124 (51%), Gaps = 4/124 (3%)
Query: 20 FPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM 79
FP G+ VL +D+D + +++ L A Y V AL + +F + I +V
Sbjct: 14 FPKGLSVLLLDEDNSSAAEIKSKLEALDYIVYTFCNENEALLAISNEPGSFHVAIVEVST 73
Query: 80 PDMDG-FKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQH 138
+ +G FK LE DLP IM S +MK I GA ++L KP+ ++L+NIWQH
Sbjct: 74 SNSNGSFKFLETAK---DLPTIMTSNIHCLNTMMKCIALGAVEFLRKPLSEDKLRNIWQH 130
Query: 139 VIRR 142
V+ +
Sbjct: 131 VVHK 134
>gi|326498541|dbj|BAJ98698.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520928|dbj|BAJ92827.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 459
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/64 (59%), Positives = 50/64 (78%)
Query: 207 STTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLY 266
S +KK +V WTPELHR+FV AV QLG+DKAVP +IL++M + LTR N+ASHLQK+R +
Sbjct: 176 SHGKKKAKVDWTPELHRRFVQAVEQLGIDKAVPSRILEIMGINSLTRHNIASHLQKYRSH 235
Query: 267 LKRL 270
K +
Sbjct: 236 RKHM 239
>gi|356508533|ref|XP_003523010.1| PREDICTED: two-component response regulator-like APRR1-like
[Glycine max]
Length = 560
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 78/135 (57%), Gaps = 5/135 (3%)
Query: 14 DGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLV 73
DG +D+ + R+L D+D + + L C Y+VT A + L + D++
Sbjct: 22 DGFVDRSKV--RILLCDNDSKSSQEVFTLLLRCSYQVTSVKSARQVIDALNAEGQHIDII 79
Query: 74 ISDVHMPDMDGFKLLEHVGLEMD---LPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIE 130
++++ +P G K+L+++ + + +PVIM+SA + +V+K + GA DYL+KP+R
Sbjct: 80 LAELDLPMKKGMKMLKYIAQDKEFRRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTN 139
Query: 131 ELKNIWQHVIRRKKV 145
EL N+W H+ RR+++
Sbjct: 140 ELLNLWTHMWRRRRM 154
>gi|89072496|ref|ZP_01159068.1| hypothetical sensory box sensor histidine kinase/response regulator
[Photobacterium sp. SKA34]
gi|89051600|gb|EAR57053.1| hypothetical sensory box sensor histidine kinase/response regulator
[Photobacterium sp. SKA34]
Length = 1132
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 83/158 (52%), Gaps = 6/158 (3%)
Query: 7 MGSAGCEDGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLREN 66
+ S CE ++ + P G +L VDD+P L++L NFLR Y V A+ ++++
Sbjct: 702 LDSRSCESTNLPENPEGDLILVVDDEPVNLQILNNFLRLAGYRVKTAESGHQAIDIVQQQ 761
Query: 67 RNNFDLVISDVHMPDMDGFK---LLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYL 123
R DL++ D+ MP+M G++ LL +LP++MLSA G + +KG GA DYL
Sbjct: 762 RP--DLILLDIMMPEMSGYEVCTLLRKQYSIFELPIMMLSALGQIQDRIKGFECGANDYL 819
Query: 124 LKPVRIEEL-KNIWQHVIRRKKVGPKDQNKLLNQENSR 160
KP EEL I ++ K K +N L QE R
Sbjct: 820 TKPFNKEELIARIQAYLQASKTEQEKQRNVTLQQEIHR 857
>gi|162458514|ref|NP_001105018.1| G2-like1 [Zea mays]
gi|13940496|gb|AAK50392.1|AF318580_1 putative transcription factor ZmGLK1 [Zea mays]
gi|413952555|gb|AFW85204.1| putative MYB DNA-binding domain superfamily protein [Zea mays]
Length = 475
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 51/64 (79%)
Query: 207 STTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLY 266
S +KK +V WTPELHR+FV AV +LG+DKAVP +IL++M ++ LTR N+ASHLQK+R +
Sbjct: 188 SQGKKKAKVDWTPELHRRFVQAVEELGIDKAVPSRILEIMGIDSLTRHNIASHLQKYRSH 247
Query: 267 LKRL 270
K +
Sbjct: 248 RKHM 251
>gi|413952556|gb|AFW85205.1| putative MYB DNA-binding domain superfamily protein [Zea mays]
Length = 476
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 51/64 (79%)
Query: 207 STTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLY 266
S +KK +V WTPELHR+FV AV +LG+DKAVP +IL++M ++ LTR N+ASHLQK+R +
Sbjct: 188 SQGKKKAKVDWTPELHRRFVQAVEELGIDKAVPSRILEIMGIDSLTRHNIASHLQKYRSH 247
Query: 267 LKRL 270
K +
Sbjct: 248 RKHM 251
>gi|224126559|ref|XP_002329584.1| pseudo response regulator [Populus trichocarpa]
gi|222870293|gb|EEF07424.1| pseudo response regulator [Populus trichocarpa]
Length = 420
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 58/92 (63%)
Query: 174 GNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLG 233
S+ N N + KD ++ D N +KK +V WTPELH+KFV V +LG
Sbjct: 250 AKSENNIHPNPQNKDSLNHSNDVASDLHTSNGTRANRKKMKVDWTPELHKKFVQVVEKLG 309
Query: 234 VDKAVPKKILDLMNVEGLTRENVASHLQKFRL 265
VD+A+P ++L+LM VE LTR NVASHLQK+R+
Sbjct: 310 VDQAIPSRVLELMKVESLTRHNVASHLQKYRM 341
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 64/124 (51%), Gaps = 4/124 (3%)
Query: 20 FPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM 79
FP G+ VL +D+D + +++ L A Y V AL + +F + I +V
Sbjct: 14 FPKGLSVLLLDEDNSSAAEIKSKLEALDYIVYTFCNENEALLAISNEPGSFHVAIVEVST 73
Query: 80 PDMDG-FKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQH 138
+ +G FK LE DLP IM S +MK I GA ++L KP+ ++L+NIWQH
Sbjct: 74 SNSNGSFKFLETAK---DLPTIMTSNIHCLNTMMKCIALGAVEFLRKPLSEDKLRNIWQH 130
Query: 139 VIRR 142
V+ +
Sbjct: 131 VVHK 134
>gi|219886905|gb|ACL53827.1| unknown [Zea mays]
Length = 476
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 51/64 (79%)
Query: 207 STTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLY 266
S +KK +V WTPELHR+FV AV +LG+DKAVP +IL++M ++ LTR N+ASHLQK+R +
Sbjct: 188 SQGKKKAKVDWTPELHRRFVQAVEELGIDKAVPSRILEIMGIDSLTRHNIASHLQKYRSH 247
Query: 267 LKRL 270
K +
Sbjct: 248 RKHM 251
>gi|381149245|gb|AFF60405.1| golden 2-like 1 transcription factor [Capsicum annuum]
Length = 447
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 81/132 (61%), Gaps = 11/132 (8%)
Query: 143 KKVGPKDQNKLLNQENSRVGAG----EGGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGD 198
KKV KD+ + + S VG+G G+ +ST S+++ + + +++ E + G
Sbjct: 96 KKVERKDETE---RAASDVGSGLTSLNQGEEIVSTQKSEES--TLQVKQNITPKESDKGK 150
Query: 199 DDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVAS 258
N ++K +V WTPELHR+FV AV QLGVDKAVP +IL++M ++ LTR N+AS
Sbjct: 151 KSSKNN--LPVKRKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILEIMGIDCLTRHNIAS 208
Query: 259 HLQKFRLYLKRL 270
HLQK+R + K L
Sbjct: 209 HLQKYRSHRKHL 220
>gi|224124202|ref|XP_002330130.1| pseudo response regulator [Populus trichocarpa]
gi|222871264|gb|EEF08395.1| pseudo response regulator [Populus trichocarpa]
Length = 541
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 80/153 (52%), Gaps = 3/153 (1%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+R+L D+D + + L C Y+VT A + L D+++S+V +P
Sbjct: 25 VRILLCDNDAKSSQEVFTLLLKCSYQVTSVRSARQVIDALNAEGPEIDIILSEVDIPMTK 84
Query: 84 GFKLLEHVGLEMDL---PVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
G K+L+++ + DL PVIM+SA + +V+K + GA DYL+KP+R EL N+W H+
Sbjct: 85 GMKMLKYIMRDKDLRRIPVIMMSAQDEVSIVVKCLRLGAADYLVKPLRTNELLNLWTHMW 144
Query: 141 RRKKVGPKDQNKLLNQENSRVGAGEGGQGAMST 173
RR+ + + +LN + V + ST
Sbjct: 145 RRRHMLGLAEKNILNYDFDPVASDPSDANTNST 177
>gi|206891080|ref|YP_002248567.1| FrgC [Thermodesulfovibrio yellowstonii DSM 11347]
gi|206743018|gb|ACI22075.1| FrgC [Thermodesulfovibrio yellowstonii DSM 11347]
Length = 139
Score = 87.8 bits (216), Expect = 2e-14, Method: Composition-based stats.
Identities = 47/135 (34%), Positives = 83/135 (61%), Gaps = 6/135 (4%)
Query: 25 RVLAVDDDPTCLKVLENFLR-ACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
++L VDD+P LK+L LR YE+T TN + A+++ + + +FDLVI+D+ MP +D
Sbjct: 4 KILIVDDEPDMLKLLSMILREKTPYEITTTNNPIEAVELAK--KGDFDLVITDLKMPGLD 61
Query: 84 GFKLLEHV-GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRR 142
G +LLE V + D+PVI+++AYG + I G D++ KP + E++ + ++
Sbjct: 62 GLQLLEEVKKRDEDVPVIIITAYGTIDAATEAIEKGGFDFITKPFKKEQILFTIEKALKW 121
Query: 143 KKVGPKDQNKLLNQE 157
+V + +NK+L ++
Sbjct: 122 LRV--QRENKMLKEK 134
>gi|62632221|gb|AAX89130.1| golden2-like transcription factor [Zea mays]
Length = 469
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 51/64 (79%)
Query: 207 STTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLY 266
S +KK +V WTPELHR+FV AV +LG+DKAVP +IL++M ++ LTR N+ASHLQK+R +
Sbjct: 185 SQGKKKAKVDWTPELHRRFVQAVEELGIDKAVPSRILEIMGIDSLTRHNIASHLQKYRSH 244
Query: 267 LKRL 270
K +
Sbjct: 245 RKHM 248
>gi|220030924|gb|ACL78627.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030974|gb|ACL78652.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 672
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM-PDM 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 103 SGIDLLSRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 140 IRR 142
RR
Sbjct: 163 WRR 165
>gi|356549890|ref|XP_003543323.1| PREDICTED: transcription activator GLK1-like [Glycine max]
Length = 436
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 50/61 (81%)
Query: 210 QKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKR 269
++K +V WTPELHR+FV AV QLGVDKAVP +IL++M ++ LTR N+ASHLQK+R + K
Sbjct: 163 KRKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILEIMGIDCLTRHNIASHLQKYRSHRKH 222
Query: 270 L 270
L
Sbjct: 223 L 223
>gi|328952068|ref|YP_004369402.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Desulfobacca acetoxidans DSM 11109]
gi|328452392|gb|AEB08221.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Desulfobacca acetoxidans DSM 11109]
Length = 455
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 68/108 (62%), Gaps = 3/108 (2%)
Query: 26 VLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDGF 85
+L VDD+ L V+E L YEV + TAL++ R RN+ DLV++D+ MP M G
Sbjct: 4 ILVVDDEKNYLLVMETLLAGAGYEVFTADSGETALELTR--RNDLDLVVTDMKMPRMSGI 61
Query: 86 KLLEHVG-LEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEEL 132
+LLE + + DLPVIM++AYG + ++ + GA DY+LKP + EE+
Sbjct: 62 ELLEQLKQVYPDLPVIMMTAYGTVEKAVEAMKKGAFDYILKPFKNEEI 109
>gi|224138036|ref|XP_002326502.1| pseudo response regulator [Populus trichocarpa]
gi|222833824|gb|EEE72301.1| pseudo response regulator [Populus trichocarpa]
Length = 448
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/62 (62%), Positives = 52/62 (83%), Gaps = 1/62 (1%)
Query: 210 QKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHL-QKFRLYLK 268
+KK +V WTPELHRKFV AV +LGVD+A+P +IL++M VEGLTR NVASHL QK+R++ +
Sbjct: 293 RKKMKVDWTPELHRKFVQAVEKLGVDQAIPSRILEVMKVEGLTRHNVASHLQQKYRMHRR 352
Query: 269 RL 270
+
Sbjct: 353 HI 354
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 64/124 (51%), Gaps = 4/124 (3%)
Query: 20 FPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM 79
FP G+RVL +D+D +++ L A Y V AL + +F + I +V M
Sbjct: 14 FPKGLRVLLLDEDSMSAAEIKSKLEAMDYIVYTFCNETEALSAISNEPGSFHVAIVEVSM 73
Query: 80 PDMD-GFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQH 138
+ FK LE DLP IM S+ +MK I GA ++L KP+ ++L+NIWQH
Sbjct: 74 SNSSRSFKFLE---TSKDLPTIMTSSIDCLNTMMKCIALGAVEFLRKPLSEDKLRNIWQH 130
Query: 139 VIRR 142
V+ +
Sbjct: 131 VVHK 134
>gi|319956809|ref|YP_004168072.1| winged helix family two component transcriptional regulator
[Nitratifractor salsuginis DSM 16511]
gi|319419213|gb|ADV46323.1| two component transcriptional regulator, winged helix family
[Nitratifractor salsuginis DSM 16511]
Length = 223
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 77/127 (60%), Gaps = 4/127 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+++L V+DD + L FLR ++V AL L++N +D+++ DV++PD
Sbjct: 7 VKILLVEDDVETSEFLSTFLRDSGFDVDTVFSVTDALSHLKQN--PYDILLLDVNLPDYS 64
Query: 84 GFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELK-NIWQHVIRR 142
G +LL+ + E+ LP I+LSAYGDT+ + +GA DY++KP+ +EEL+ IW + +
Sbjct: 65 GMELLKSIKGELSLPTIILSAYGDTRSKIMAFRYGATDYMVKPIDLEELEARIWVQLGKN 124
Query: 143 KKVGPKD 149
K+ P D
Sbjct: 125 SKI-PSD 130
>gi|159487595|ref|XP_001701808.1| response regulator of potential two component system [Chlamydomonas
reinhardtii]
gi|158281027|gb|EDP06783.1| response regulator of potential two component system [Chlamydomonas
reinhardtii]
Length = 610
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 74/147 (50%), Gaps = 28/147 (19%)
Query: 23 GMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKML---RENRNNFDLVISDVHM 79
G V+ V+DD CLKV+E LR Y V+ + ALK+L ++ + DL+++D+ M
Sbjct: 5 GFHVVLVEDDNICLKVVEQLLRKLSYRVSTASDGAAALKVLADCKQRGDKVDLILTDILM 64
Query: 80 PDMDGFKLLE---HVGLEMDLPVI----------------------MLSAYGDTKLVMKG 114
P++ GF L+ H D+PV+ ++S+ + V++
Sbjct: 65 PEVTGFDLINEVVHGETFADIPVVASGTFLGFGRRTVRTVAWSRCQVMSSQDSQESVLQA 124
Query: 115 ITHGACDYLLKPVRIEELKNIWQHVIR 141
GA DYL+KP+R EL +WQHV R
Sbjct: 125 FQAGAADYLIKPIRKNELATLWQHVWR 151
>gi|456359240|dbj|BAM93449.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359248|dbj|BAM93453.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
Length = 662
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPD-M 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 36 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 95
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 96 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 155
Query: 140 IRR 142
RR
Sbjct: 156 WRR 158
>gi|356542986|ref|XP_003539944.1| PREDICTED: transcription activator GLK1-like [Glycine max]
Length = 428
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 50/61 (81%)
Query: 210 QKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKR 269
++K +V WTPELHR+FV AV QLGVDKAVP +IL++M ++ LTR N+ASHLQK+R + K
Sbjct: 173 KRKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILEIMGIDCLTRHNIASHLQKYRSHRKH 232
Query: 270 L 270
L
Sbjct: 233 L 233
>gi|456359228|dbj|BAM93443.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359236|dbj|BAM93447.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359238|dbj|BAM93448.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359242|dbj|BAM93450.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359260|dbj|BAM93459.1| pseudo-response regulator [Triticum dicoccoides]
Length = 662
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPD-M 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 36 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 95
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 96 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 155
Query: 140 IRR 142
RR
Sbjct: 156 WRR 158
>gi|357150179|ref|XP_003575369.1| PREDICTED: two-component response regulator-like PRR1-like
[Brachypodium distachyon]
Length = 521
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 72/125 (57%), Gaps = 3/125 (2%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+R+L D DP + + LR C Y+VT + +L D+++++V +P
Sbjct: 33 VRILLCDSDPDSSRDVLRLLRNCSYQVTCAKSPRQVINVLNCEGAEMDIILAEVDLPVSK 92
Query: 84 GFKLLEHVGLEMDL---PVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
FK+L+++ +L P+IM+S + +V+K + GA +YL+KP+R+ EL N+W HV
Sbjct: 93 CFKMLKYIARNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLWTHVW 152
Query: 141 RRKKV 145
RR+++
Sbjct: 153 RRRRM 157
>gi|334184330|ref|NP_001189562.1| GBF's pro-rich region-interacting factor 1 [Arabidopsis thaliana]
gi|330251937|gb|AEC07031.1| GBF's pro-rich region-interacting factor 1 [Arabidopsis thaliana]
Length = 436
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/57 (70%), Positives = 46/57 (80%)
Query: 214 RVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKRL 270
+V WTPELHR+FV AV QLGVDKAVP +IL+LM V LTR NVASHLQK+R + K L
Sbjct: 171 KVDWTPELHRRFVEAVEQLGVDKAVPSRILELMGVHCLTRHNVASHLQKYRSHRKHL 227
>gi|18415009|ref|NP_567548.1| two-component response regulator-like APRR2 [Arabidopsis thaliana]
gi|30684266|ref|NP_849403.1| two-component response regulator-like APRR2 [Arabidopsis thaliana]
gi|145361326|ref|NP_849404.2| two-component response regulator-like APRR2 [Arabidopsis thaliana]
gi|334186660|ref|NP_001190759.1| two-component response regulator-like APRR2 [Arabidopsis thaliana]
gi|52783226|sp|Q6LA43.2|APRR2_ARATH RecName: Full=Two-component response regulator-like APRR2; AltName:
Full=Pseudo-response regulator 2; AltName: Full=TOC2
protein
gi|14326543|gb|AAK60316.1|AF385725_1 AT4g18020/T6K21_200 [Arabidopsis thaliana]
gi|23506085|gb|AAN28902.1| At4g18020/T6K21_200 [Arabidopsis thaliana]
gi|332658580|gb|AEE83980.1| two-component response regulator-like APRR2 [Arabidopsis thaliana]
gi|332658581|gb|AEE83981.1| two-component response regulator-like APRR2 [Arabidopsis thaliana]
gi|332658582|gb|AEE83982.1| two-component response regulator-like APRR2 [Arabidopsis thaliana]
gi|332658585|gb|AEE83985.1| two-component response regulator-like APRR2 [Arabidopsis thaliana]
Length = 535
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/112 (44%), Positives = 67/112 (59%), Gaps = 19/112 (16%)
Query: 177 DQNGKSNRKRKDQDGDEDEDGDD--DGHENEDST----------------TQKKPRVVWT 218
++ G S ++ + + GD + D D H+ ED T T +K +V WT
Sbjct: 244 EERGDSEKEEEGETGDLISEKTDSVDIHKKEDETKPINKSSGIKNVSGNKTSRK-KVDWT 302
Query: 219 PELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKRL 270
PELH+KFV AV QLGVD+A+P +IL+LM V LTR NVASHLQKFR + K +
Sbjct: 303 PELHKKFVQAVEQLGVDQAIPSRILELMKVGTLTRHNVASHLQKFRQHRKNI 354
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 67/132 (50%), Gaps = 9/132 (6%)
Query: 18 DKFPIGMRVLAV------DDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFD 71
+ FP G++VL + D D + + L + Y VT AL + +N +F
Sbjct: 12 ENFPKGLKVLLLLNGCDSDGDGSSAAETRSELESMDYIVTTFTDETEALSAVVKNPESFH 71
Query: 72 LVISDVHM-PDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIE 130
+ I +V+M + + FK LE + LP IM+S MK I GA ++L KP+ E
Sbjct: 72 IAIVEVNMSAESESFKFLE--AAKDVLPTIMISTDHCITTTMKCIALGAVEFLQKPLSPE 129
Query: 131 ELKNIWQHVIRR 142
+LKNIWQHV+ +
Sbjct: 130 KLKNIWQHVVHK 141
>gi|379025744|dbj|BAL63649.1| pseudo-response regulator [Triticum durum]
gi|379025748|dbj|BAL63651.1| pseudo-response regulator [Triticum durum]
gi|379025762|dbj|BAL63658.1| pseudo-response regulator [Triticum durum]
gi|379025764|dbj|BAL63659.1| pseudo-response regulator [Triticum durum]
Length = 677
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPD-M 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 97
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 140 IRR 142
RR
Sbjct: 158 WRR 160
>gi|379025742|dbj|BAL63648.1| pseudo-response regulator [Triticum durum]
Length = 677
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPD-M 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 97
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 140 IRR 142
RR
Sbjct: 158 WRR 160
>gi|379025736|dbj|BAL63645.1| pseudo-response regulator [Triticum durum]
gi|379025738|dbj|BAL63646.1| pseudo-response regulator [Triticum durum]
gi|379025740|dbj|BAL63647.1| pseudo-response regulator [Triticum durum]
gi|379025746|dbj|BAL63650.1| pseudo-response regulator [Triticum durum]
gi|379025750|dbj|BAL63652.1| pseudo-response regulator [Triticum durum]
gi|379025752|dbj|BAL63653.1| pseudo-response regulator [Triticum durum]
gi|379025754|dbj|BAL63654.1| pseudo-response regulator [Triticum durum]
gi|379025756|dbj|BAL63655.1| pseudo-response regulator [Triticum durum]
gi|379025758|dbj|BAL63656.1| pseudo-response regulator [Triticum durum]
gi|379025760|dbj|BAL63657.1| pseudo-response regulator [Triticum durum]
Length = 677
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPD-M 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 97
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 140 IRR 142
RR
Sbjct: 158 WRR 160
>gi|255553629|ref|XP_002517855.1| DNA binding protein, putative [Ricinus communis]
gi|223542837|gb|EEF44373.1| DNA binding protein, putative [Ricinus communis]
Length = 424
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 53/68 (77%)
Query: 203 ENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQK 262
+N + ++K +V WTP+LHR+FV AV QLGVDKAVP +IL+LM ++ LTR N+ASHLQK
Sbjct: 140 KNSNHQGKRKVKVDWTPDLHRRFVQAVEQLGVDKAVPSRILELMGIDCLTRHNIASHLQK 199
Query: 263 FRLYLKRL 270
+R + K L
Sbjct: 200 YRSHRKHL 207
>gi|145333342|ref|NP_001078405.1| two-component response regulator-like APRR2 [Arabidopsis thaliana]
gi|238480814|ref|NP_001154250.1| two-component response regulator-like APRR2 [Arabidopsis thaliana]
gi|7576356|dbj|BAA94548.1| pseudo-response regulator 2 [Arabidopsis thaliana]
gi|332658583|gb|AEE83983.1| two-component response regulator-like APRR2 [Arabidopsis thaliana]
gi|332658584|gb|AEE83984.1| two-component response regulator-like APRR2 [Arabidopsis thaliana]
Length = 487
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/112 (44%), Positives = 67/112 (59%), Gaps = 19/112 (16%)
Query: 177 DQNGKSNRKRKDQDGDEDEDGDD--DGHENEDST----------------TQKKPRVVWT 218
++ G S ++ + + GD + D D H+ ED T T +K +V WT
Sbjct: 244 EERGDSEKEEEGETGDLISEKTDSVDIHKKEDETKPINKSSGIKNVSGNKTSRK-KVDWT 302
Query: 219 PELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKRL 270
PELH+KFV AV QLGVD+A+P +IL+LM V LTR NVASHLQKFR + K +
Sbjct: 303 PELHKKFVQAVEQLGVDQAIPSRILELMKVGTLTRHNVASHLQKFRQHRKNI 354
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 67/132 (50%), Gaps = 9/132 (6%)
Query: 18 DKFPIGMRVLAV------DDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFD 71
+ FP G++VL + D D + + L + Y VT AL + +N +F
Sbjct: 12 ENFPKGLKVLLLLNGCDSDGDGSSAAETRSELESMDYIVTTFTDETEALSAVVKNPESFH 71
Query: 72 LVISDVHM-PDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIE 130
+ I +V+M + + FK LE + LP IM+S MK I GA ++L KP+ E
Sbjct: 72 IAIVEVNMSAESESFKFLE--AAKDVLPTIMISTDHCITTTMKCIALGAVEFLQKPLSPE 129
Query: 131 ELKNIWQHVIRR 142
+LKNIWQHV+ +
Sbjct: 130 KLKNIWQHVVHK 141
>gi|456359230|dbj|BAM93444.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359232|dbj|BAM93445.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359234|dbj|BAM93446.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
Length = 662
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPD-M 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 36 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 95
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 96 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 155
Query: 140 IRR 142
RR
Sbjct: 156 WRR 158
>gi|456359114|dbj|BAM93386.1| pseudo-response regulator [Triticum monococcum subsp. monococcum]
Length = 662
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPD-M 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 31 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 90
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 91 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 150
Query: 140 IRR 142
RR
Sbjct: 151 WRR 153
>gi|456359102|dbj|BAM93380.1| pseudo-response regulator [Triticum monococcum subsp. aegilopoides]
Length = 662
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPD-M 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 31 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 90
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 91 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 150
Query: 140 IRR 142
RR
Sbjct: 151 WRR 153
>gi|118638624|gb|ABL09468.1| pseudo-response regulator [Triticum aestivum]
gi|383215296|gb|AFG73161.1| pseudo-response regulator [Triticum aestivum]
gi|383215297|gb|AFG73162.1| pseudo-response regulator [Triticum aestivum]
gi|383215298|gb|AFG73163.1| pseudo-response regulator [Triticum aestivum]
Length = 664
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPD-M 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 94
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 95 SGIDLLGRIMNHEVCKDIPVIMMSSHNSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 154
Query: 140 IRR 142
RR
Sbjct: 155 WRR 157
>gi|307105497|gb|EFN53746.1| hypothetical protein CHLNCDRAFT_136336 [Chlorella variabilis]
Length = 575
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Query: 204 NEDSTTQKKPRVVWTPELHRKFVGAVNQLG-VDKAVPKKILDLMNVEGLTRENVASHLQK 262
++D KK R++WTP LHR+F+ AVN++G VDKA+PK ++ M V GLTRENVASHLQK
Sbjct: 459 DDDPCALKKARLIWTPALHRRFLEAVNRVGGVDKALPKAVMKEMGVSGLTRENVASHLQK 518
Query: 263 FRLYLKR 269
R+ LK+
Sbjct: 519 HRMRLKK 525
>gi|456359104|dbj|BAM93381.1| pseudo-response regulator [Triticum monococcum subsp. aegilopoides]
gi|456359106|dbj|BAM93382.1| pseudo-response regulator [Triticum monococcum subsp. aegilopoides]
gi|456359108|dbj|BAM93383.1| pseudo-response regulator [Triticum monococcum subsp. aegilopoides]
gi|456359116|dbj|BAM93387.1| pseudo-response regulator [Triticum monococcum subsp. monococcum]
Length = 662
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPD-M 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 31 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 90
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 91 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 150
Query: 140 IRR 142
RR
Sbjct: 151 WRR 153
>gi|118638644|gb|ABL09478.1| pseudo-response regulator [Triticum aestivum]
gi|118638646|gb|ABL09479.1| pseudo-response regulator [Triticum aestivum]
gi|118638648|gb|ABL09480.1| pseudo-response regulator [Triticum aestivum]
gi|395759125|dbj|BAM31259.1| pseudo-response regulator [Triticum aestivum]
Length = 660
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPD-M 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 32 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 91
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 92 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 151
Query: 140 IRR 142
RR
Sbjct: 152 WRR 154
>gi|220030726|gb|ACL78528.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM-PDM 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 140 IRR 142
RR
Sbjct: 163 WRR 165
>gi|118638642|gb|ABL09477.1| pseudo-response regulator [Triticum aestivum]
Length = 660
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPD-M 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 32 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 91
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 92 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 151
Query: 140 IRR 142
RR
Sbjct: 152 WRR 154
>gi|220030954|gb|ACL78642.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 672
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM-PDM 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 140 IRR 142
RR
Sbjct: 163 WRR 165
>gi|379025682|dbj|BAL63618.1| pseudo-response regulator [Triticum durum]
Length = 668
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPD-M 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 97
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 140 IRR 142
RR
Sbjct: 158 WRR 160
>gi|379025526|dbj|BAL63540.1| pseudo-response regulator [Triticum dicoccoides]
Length = 668
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPD-M 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 97
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 140 IRR 142
RR
Sbjct: 158 WRR 160
>gi|379025506|dbj|BAL63530.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025508|dbj|BAL63531.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025510|dbj|BAL63532.1| pseudo-response regulator [Triticum dicoccoides]
Length = 668
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPD-M 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 97
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 140 IRR 142
RR
Sbjct: 158 WRR 160
>gi|220031040|gb|ACL78685.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 673
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM-PDM 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 140 IRR 142
RR
Sbjct: 163 WRR 165
>gi|220030962|gb|ACL78646.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM-PDM 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 140 IRR 142
RR
Sbjct: 163 WRR 165
>gi|220030948|gb|ACL78639.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 673
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM-PDM 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 140 IRR 142
RR
Sbjct: 163 WRR 165
>gi|220030930|gb|ACL78630.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030932|gb|ACL78631.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030946|gb|ACL78638.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030950|gb|ACL78640.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 672
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM-PDM 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 140 IRR 142
RR
Sbjct: 163 WRR 165
>gi|220030890|gb|ACL78610.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 673
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM-PDM 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 140 IRR 142
RR
Sbjct: 163 WRR 165
>gi|220030858|gb|ACL78594.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM-PDM 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 140 IRR 142
RR
Sbjct: 163 WRR 165
>gi|118638651|gb|ABL09481.1| pseudo-response regulator [Aegilops tauschii]
Length = 661
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPD-M 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 32 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 91
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 92 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 151
Query: 140 IRR 142
RR
Sbjct: 152 WRR 154
>gi|456359120|dbj|BAM93389.1| pseudo-response regulator [Triticum urartu]
gi|456359122|dbj|BAM93390.1| pseudo-response regulator [Triticum urartu]
gi|456359124|dbj|BAM93391.1| pseudo-response regulator [Triticum urartu]
gi|456359126|dbj|BAM93392.1| pseudo-response regulator [Triticum urartu]
Length = 665
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPD-M 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 97
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 140 IRR 142
RR
Sbjct: 158 WRR 160
>gi|65329070|gb|AAY42110.1| pseudo-response regulator PPD-H1 [Hordeum vulgare subsp. vulgare]
gi|65329087|gb|AAY42111.1| pseudo-response regulator PPD-H1 [Hordeum vulgare]
gi|65329107|gb|AAY42112.1| pseudo-response regulator PPD-H1 [Hordeum vulgare subsp. vulgare]
gi|220030976|gb|ACL78653.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030978|gb|ACL78654.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030994|gb|ACL78662.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM-PDM 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 140 IRR 142
RR
Sbjct: 163 WRR 165
>gi|220030958|gb|ACL78644.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM-PDM 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 140 IRR 142
RR
Sbjct: 163 WRR 165
>gi|220030960|gb|ACL78645.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 672
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM-PDM 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 140 IRR 142
RR
Sbjct: 163 WRR 165
>gi|220030862|gb|ACL78596.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031064|gb|ACL78697.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM-PDM 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 140 IRR 142
RR
Sbjct: 163 WRR 165
>gi|220030706|gb|ACL78518.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM-PDM 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 140 IRR 142
RR
Sbjct: 163 WRR 165
>gi|220030692|gb|ACL78511.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030696|gb|ACL78513.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030698|gb|ACL78514.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030704|gb|ACL78517.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030708|gb|ACL78519.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030722|gb|ACL78526.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030724|gb|ACL78527.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030728|gb|ACL78529.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030730|gb|ACL78530.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030734|gb|ACL78532.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030736|gb|ACL78533.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030738|gb|ACL78534.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030740|gb|ACL78535.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030742|gb|ACL78536.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030744|gb|ACL78537.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030748|gb|ACL78539.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030750|gb|ACL78540.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030752|gb|ACL78541.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030754|gb|ACL78542.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030758|gb|ACL78544.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030760|gb|ACL78545.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030762|gb|ACL78546.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030764|gb|ACL78547.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030766|gb|ACL78548.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030772|gb|ACL78551.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030774|gb|ACL78552.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030776|gb|ACL78553.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030778|gb|ACL78554.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030782|gb|ACL78556.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030784|gb|ACL78557.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030786|gb|ACL78558.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030788|gb|ACL78559.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030792|gb|ACL78561.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030794|gb|ACL78562.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030796|gb|ACL78563.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030798|gb|ACL78564.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030802|gb|ACL78566.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030804|gb|ACL78567.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030806|gb|ACL78568.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030808|gb|ACL78569.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030810|gb|ACL78570.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030820|gb|ACL78575.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030822|gb|ACL78576.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030824|gb|ACL78577.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030828|gb|ACL78579.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030830|gb|ACL78580.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030832|gb|ACL78581.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030834|gb|ACL78582.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030838|gb|ACL78584.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030846|gb|ACL78588.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030850|gb|ACL78590.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM-PDM 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 140 IRR 142
RR
Sbjct: 163 WRR 165
>gi|379025858|dbj|BAL63706.1| pseudo-response regulator [Triticum dicoccoides]
Length = 665
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPD-M 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 36 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 95
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 96 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 155
Query: 140 IRR 142
RR
Sbjct: 156 WRR 158
>gi|379025856|dbj|BAL63705.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025860|dbj|BAL63707.1| pseudo-response regulator [Triticum dicoccoides]
gi|379026014|dbj|BAL63784.1| pseudo-response regulator [Triticum durum]
gi|379026016|dbj|BAL63785.1| pseudo-response regulator [Triticum durum]
gi|379026018|dbj|BAL63786.1| pseudo-response regulator [Triticum durum]
gi|379026020|dbj|BAL63787.1| pseudo-response regulator [Triticum durum]
gi|379026022|dbj|BAL63788.1| pseudo-response regulator [Triticum durum]
gi|379026024|dbj|BAL63789.1| pseudo-response regulator [Triticum durum]
gi|456359268|dbj|BAM93463.1| pseudo-response regulator [Triticum dicoccoides]
Length = 665
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPD-M 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 36 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 95
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 96 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 155
Query: 140 IRR 142
RR
Sbjct: 156 WRR 158
>gi|220031158|gb|ACL78744.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM-PDM 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 140 IRR 142
RR
Sbjct: 163 WRR 165
>gi|220031050|gb|ACL78690.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031058|gb|ACL78694.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031066|gb|ACL78698.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031068|gb|ACL78699.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031070|gb|ACL78700.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031076|gb|ACL78703.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031078|gb|ACL78704.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031094|gb|ACL78712.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031096|gb|ACL78713.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031100|gb|ACL78715.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031102|gb|ACL78716.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031104|gb|ACL78717.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031106|gb|ACL78718.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031108|gb|ACL78719.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031112|gb|ACL78721.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031136|gb|ACL78733.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031146|gb|ACL78738.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031148|gb|ACL78739.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031150|gb|ACL78740.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031156|gb|ACL78743.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031160|gb|ACL78745.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031162|gb|ACL78746.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031180|gb|ACL78755.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031198|gb|ACL78764.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM-PDM 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 140 IRR 142
RR
Sbjct: 163 WRR 165
>gi|220031046|gb|ACL78688.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031084|gb|ACL78707.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031092|gb|ACL78711.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031116|gb|ACL78723.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031118|gb|ACL78724.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031120|gb|ACL78725.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031122|gb|ACL78726.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031124|gb|ACL78727.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031126|gb|ACL78728.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031128|gb|ACL78729.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031130|gb|ACL78730.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031132|gb|ACL78731.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031134|gb|ACL78732.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031152|gb|ACL78741.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031154|gb|ACL78742.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031196|gb|ACL78763.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031200|gb|ACL78765.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031202|gb|ACL78766.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM-PDM 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 140 IRR 142
RR
Sbjct: 163 WRR 165
>gi|220030672|gb|ACL78501.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030674|gb|ACL78502.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030686|gb|ACL78508.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030688|gb|ACL78509.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030690|gb|ACL78510.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030700|gb|ACL78515.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030702|gb|ACL78516.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030710|gb|ACL78520.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030714|gb|ACL78522.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030716|gb|ACL78523.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030718|gb|ACL78524.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030720|gb|ACL78525.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030732|gb|ACL78531.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030746|gb|ACL78538.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030756|gb|ACL78543.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030768|gb|ACL78549.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030770|gb|ACL78550.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030800|gb|ACL78565.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030812|gb|ACL78571.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030814|gb|ACL78572.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030816|gb|ACL78573.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030818|gb|ACL78574.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030826|gb|ACL78578.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030844|gb|ACL78587.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030852|gb|ACL78591.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM-PDM 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 140 IRR 142
RR
Sbjct: 163 WRR 165
>gi|456359186|dbj|BAM93422.1| pseudo-response regulator [Triticum urartu]
Length = 662
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPD-M 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 94
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 95 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 154
Query: 140 IRR 142
RR
Sbjct: 155 WRR 157
>gi|456359164|dbj|BAM93411.1| pseudo-response regulator [Triticum urartu]
Length = 662
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPD-M 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 94
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 95 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 154
Query: 140 IRR 142
RR
Sbjct: 155 WRR 157
>gi|456359146|dbj|BAM93402.1| pseudo-response regulator [Triticum urartu]
gi|456359148|dbj|BAM93403.1| pseudo-response regulator [Triticum urartu]
gi|456359150|dbj|BAM93404.1| pseudo-response regulator [Triticum urartu]
gi|456359152|dbj|BAM93405.1| pseudo-response regulator [Triticum urartu]
gi|456359154|dbj|BAM93406.1| pseudo-response regulator [Triticum urartu]
gi|456359156|dbj|BAM93407.1| pseudo-response regulator [Triticum urartu]
gi|456359158|dbj|BAM93408.1| pseudo-response regulator [Triticum urartu]
gi|456359160|dbj|BAM93409.1| pseudo-response regulator [Triticum urartu]
gi|456359162|dbj|BAM93410.1| pseudo-response regulator [Triticum urartu]
gi|456359166|dbj|BAM93412.1| pseudo-response regulator [Triticum urartu]
gi|456359168|dbj|BAM93413.1| pseudo-response regulator [Triticum urartu]
gi|456359170|dbj|BAM93414.1| pseudo-response regulator [Triticum urartu]
gi|456359172|dbj|BAM93415.1| pseudo-response regulator [Triticum urartu]
gi|456359174|dbj|BAM93416.1| pseudo-response regulator [Triticum urartu]
gi|456359176|dbj|BAM93417.1| pseudo-response regulator [Triticum urartu]
gi|456359178|dbj|BAM93418.1| pseudo-response regulator [Triticum urartu]
gi|456359180|dbj|BAM93419.1| pseudo-response regulator [Triticum urartu]
gi|456359182|dbj|BAM93420.1| pseudo-response regulator [Triticum urartu]
gi|456359184|dbj|BAM93421.1| pseudo-response regulator [Triticum urartu]
gi|456359188|dbj|BAM93423.1| pseudo-response regulator [Triticum urartu]
gi|456359190|dbj|BAM93424.1| pseudo-response regulator [Triticum urartu]
gi|456359192|dbj|BAM93425.1| pseudo-response regulator [Triticum urartu]
Length = 662
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPD-M 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 94
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 95 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 154
Query: 140 IRR 142
RR
Sbjct: 155 WRR 157
>gi|456359140|dbj|BAM93399.1| pseudo-response regulator [Triticum urartu]
gi|456359142|dbj|BAM93400.1| pseudo-response regulator [Triticum urartu]
gi|456359144|dbj|BAM93401.1| pseudo-response regulator [Triticum urartu]
Length = 665
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPD-M 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 97
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 140 IRR 142
RR
Sbjct: 158 WRR 160
>gi|456359128|dbj|BAM93393.1| pseudo-response regulator [Triticum urartu]
gi|456359130|dbj|BAM93394.1| pseudo-response regulator [Triticum urartu]
gi|456359132|dbj|BAM93395.1| pseudo-response regulator [Triticum urartu]
gi|456359134|dbj|BAM93396.1| pseudo-response regulator [Triticum urartu]
gi|456359136|dbj|BAM93397.1| pseudo-response regulator [Triticum urartu]
gi|456359138|dbj|BAM93398.1| pseudo-response regulator [Triticum urartu]
Length = 665
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPD-M 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 97
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 140 IRR 142
RR
Sbjct: 158 WRR 160
>gi|220031098|gb|ACL78714.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM-PDM 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 140 IRR 142
RR
Sbjct: 163 WRR 165
>gi|220030956|gb|ACL78643.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM-PDM 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 140 IRR 142
RR
Sbjct: 163 WRR 165
>gi|379025516|dbj|BAL63535.1| pseudo-response regulator [Triticum dicoccoides]
gi|456359206|dbj|BAM93432.1| pseudo-response regulator [Triticum dicoccoides]
Length = 668
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPD-M 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 97
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 140 IRR 142
RR
Sbjct: 158 WRR 160
>gi|456359204|dbj|BAM93431.1| pseudo-response regulator [Triticum dicoccoides]
Length = 668
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPD-M 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 97
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 140 IRR 142
RR
Sbjct: 158 WRR 160
>gi|220030678|gb|ACL78504.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030682|gb|ACL78506.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030684|gb|ACL78507.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030712|gb|ACL78521.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030780|gb|ACL78555.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030836|gb|ACL78583.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030840|gb|ACL78585.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM-PDM 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 140 IRR 142
RR
Sbjct: 163 WRR 165
>gi|62868803|gb|AAY17586.1| pseudo-response regulator [Hordeum vulgare subsp. vulgare]
Length = 674
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM-PDM 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 140 IRR 142
RR
Sbjct: 163 WRR 165
>gi|220030966|gb|ACL78648.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 673
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM-PDM 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 140 IRR 142
RR
Sbjct: 163 WRR 165
>gi|220030936|gb|ACL78633.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 675
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM-PDM 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 140 IRR 142
RR
Sbjct: 163 WRR 165
>gi|220030926|gb|ACL78628.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030952|gb|ACL78641.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031038|gb|ACL78684.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM-PDM 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 140 IRR 142
RR
Sbjct: 163 WRR 165
>gi|220030918|gb|ACL78624.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030934|gb|ACL78632.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030996|gb|ACL78663.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031044|gb|ACL78687.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031072|gb|ACL78701.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031074|gb|ACL78702.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031080|gb|ACL78705.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031082|gb|ACL78706.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031086|gb|ACL78708.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031088|gb|ACL78709.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031110|gb|ACL78720.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031138|gb|ACL78734.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031140|gb|ACL78735.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031142|gb|ACL78736.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031144|gb|ACL78737.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031164|gb|ACL78747.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031166|gb|ACL78748.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031176|gb|ACL78753.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031178|gb|ACL78754.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031182|gb|ACL78756.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031186|gb|ACL78758.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031188|gb|ACL78759.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM-PDM 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 140 IRR 142
RR
Sbjct: 163 WRR 165
>gi|220030888|gb|ACL78609.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 675
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM-PDM 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 140 IRR 142
RR
Sbjct: 163 WRR 165
>gi|159154683|gb|ABW93669.1| pseudo-response regulator [Triticum turgidum]
gi|379025504|dbj|BAL63529.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025524|dbj|BAL63539.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025530|dbj|BAL63542.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025532|dbj|BAL63543.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025536|dbj|BAL63545.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025544|dbj|BAL63549.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025546|dbj|BAL63550.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025548|dbj|BAL63551.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025550|dbj|BAL63552.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025552|dbj|BAL63553.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025554|dbj|BAL63554.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025556|dbj|BAL63555.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025558|dbj|BAL63556.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025560|dbj|BAL63557.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025562|dbj|BAL63558.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025564|dbj|BAL63559.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025642|dbj|BAL63598.1| pseudo-response regulator [Triticum durum]
gi|379025766|dbj|BAL63660.1| pseudo-response regulator [Triticum durum]
gi|456359070|dbj|BAM93364.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359090|dbj|BAM93374.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359200|dbj|BAM93429.1| pseudo-response regulator [Triticum turgidum subsp. pyramidale]
gi|456359202|dbj|BAM93430.1| pseudo-response regulator [Triticum dicoccoides]
gi|456359210|dbj|BAM93434.1| pseudo-response regulator [Triticum dicoccoides]
gi|456359212|dbj|BAM93435.1| pseudo-response regulator [Triticum dicoccoides]
gi|456359218|dbj|BAM93438.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 668
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPD-M 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 97
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 140 IRR 142
RR
Sbjct: 158 WRR 160
>gi|220031042|gb|ACL78686.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM-PDM 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 140 IRR 142
RR
Sbjct: 163 WRR 165
>gi|220030964|gb|ACL78647.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 673
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM-PDM 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 140 IRR 142
RR
Sbjct: 163 WRR 165
>gi|220030866|gb|ACL78598.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030868|gb|ACL78599.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030872|gb|ACL78601.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030878|gb|ACL78604.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030940|gb|ACL78635.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031062|gb|ACL78696.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM-PDM 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 140 IRR 142
RR
Sbjct: 163 WRR 165
>gi|220030856|gb|ACL78593.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030870|gb|ACL78600.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030876|gb|ACL78603.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030898|gb|ACL78614.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030938|gb|ACL78634.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030944|gb|ACL78637.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030968|gb|ACL78649.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030980|gb|ACL78655.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030982|gb|ACL78656.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030988|gb|ACL78659.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030990|gb|ACL78660.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPD-M 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 140 IRR 142
RR
Sbjct: 163 WRR 165
>gi|220030854|gb|ACL78592.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPD-M 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 140 IRR 142
RR
Sbjct: 163 WRR 165
>gi|65329050|gb|AAY42109.1| pseudo-response regulator PPD-H1 [Hordeum vulgare subsp. vulgare]
gi|220030874|gb|ACL78602.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030916|gb|ACL78623.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031014|gb|ACL78672.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM-PDM 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 140 IRR 142
RR
Sbjct: 163 WRR 165
>gi|220031174|gb|ACL78752.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM-PDM 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 140 IRR 142
RR
Sbjct: 163 WRR 165
>gi|220031172|gb|ACL78751.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM-PDM 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 140 IRR 142
RR
Sbjct: 163 WRR 165
>gi|220030676|gb|ACL78503.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030680|gb|ACL78505.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030694|gb|ACL78512.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030842|gb|ACL78586.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030848|gb|ACL78589.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM-PDM 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 140 IRR 142
RR
Sbjct: 163 WRR 165
>gi|220031018|gb|ACL78674.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031026|gb|ACL78678.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031028|gb|ACL78679.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPD-M 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 140 IRR 142
RR
Sbjct: 163 WRR 165
>gi|220030894|gb|ACL78612.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 675
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM-PDM 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 140 IRR 142
RR
Sbjct: 163 WRR 165
>gi|197122437|ref|YP_002134388.1| response regulator receiver modulated metal dependent
phosphohydrolase [Anaeromyxobacter sp. K]
gi|220917204|ref|YP_002492508.1| response regulator receiver modulated metal dependent
phosphohydrolase [Anaeromyxobacter dehalogenans 2CP-1]
gi|196172286|gb|ACG73259.1| response regulator receiver modulated metal dependent
phosphohydrolase [Anaeromyxobacter sp. K]
gi|219955058|gb|ACL65442.1| response regulator receiver modulated metal dependent
phosphohydrolase [Anaeromyxobacter dehalogenans 2CP-1]
Length = 357
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 70/126 (55%), Gaps = 3/126 (2%)
Query: 21 PIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMP 80
P R+L VDDD V+ LR Y T A AL R + ++ LVISDV MP
Sbjct: 6 PEATRILIVDDDAAVRDVITVLLREEGYVCTTVASAEAALDEAR--KTDYPLVISDVRMP 63
Query: 81 DMDGFKLLEHVG-LEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
DGF LLE + D VIML+AYGDT+ ++ + +GA DYLLKP ++ EL +
Sbjct: 64 ARDGFWLLEQMREASPDTAVIMLTAYGDTEAAVECLRNGAADYLLKPPKVTELIRAIERA 123
Query: 140 IRRKKV 145
+ R+++
Sbjct: 124 LGRRRL 129
>gi|456359266|dbj|BAM93462.1| pseudo-response regulator [Triticum dicoccoides]
Length = 659
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPD-M 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 94
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 95 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 154
Query: 140 IRR 142
RR
Sbjct: 155 WRR 157
>gi|379025778|dbj|BAL63666.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 664
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPD-M 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 94
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 95 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 154
Query: 140 IRR 142
RR
Sbjct: 155 WRR 157
>gi|220031034|gb|ACL78682.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031048|gb|ACL78689.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031054|gb|ACL78692.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM-PDM 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 140 IRR 142
RR
Sbjct: 163 WRR 165
>gi|220030942|gb|ACL78636.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPD-M 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 140 IRR 142
RR
Sbjct: 163 WRR 165
>gi|220030912|gb|ACL78621.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030914|gb|ACL78622.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM-PDM 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 140 IRR 142
RR
Sbjct: 163 WRR 165
>gi|220030864|gb|ACL78597.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030984|gb|ACL78657.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030986|gb|ACL78658.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030992|gb|ACL78661.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030998|gb|ACL78664.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031000|gb|ACL78665.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031002|gb|ACL78666.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031004|gb|ACL78667.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031006|gb|ACL78668.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031008|gb|ACL78669.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031010|gb|ACL78670.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031012|gb|ACL78671.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM-PDM 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 140 IRR 142
RR
Sbjct: 163 WRR 165
>gi|86158253|ref|YP_465038.1| response regulator receiver (CheY-like) modulated metal dependent
phosphohydrolase [Anaeromyxobacter dehalogenans 2CP-C]
gi|85774764|gb|ABC81601.1| response regulator receiver (CheY-like) modulated metal dependent
phosphohydrolase [Anaeromyxobacter dehalogenans 2CP-C]
Length = 357
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 70/126 (55%), Gaps = 3/126 (2%)
Query: 21 PIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMP 80
P R+L VDDD V+ LR Y T A AL R + ++ LVISDV MP
Sbjct: 6 PEATRILIVDDDAAVRDVITVLLREEGYVCTTVASAEAALDEAR--KTDYPLVISDVRMP 63
Query: 81 DMDGFKLLEHVG-LEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
DGF LLE + D VIML+AYGDT+ ++ + +GA DYLLKP ++ EL +
Sbjct: 64 ARDGFWLLEQMREASPDTAVIMLTAYGDTEAAVECLRNGAADYLLKPPKVTELIRAIERA 123
Query: 140 IRRKKV 145
+ R+++
Sbjct: 124 LGRRRL 129
>gi|220031090|gb|ACL78710.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031114|gb|ACL78722.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031168|gb|ACL78749.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031170|gb|ACL78750.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031190|gb|ACL78760.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031192|gb|ACL78761.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031194|gb|ACL78762.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM-PDM 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 140 IRR 142
RR
Sbjct: 163 WRR 165
>gi|220030860|gb|ACL78595.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031184|gb|ACL78757.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM-PDM 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 140 IRR 142
RR
Sbjct: 163 WRR 165
>gi|65329125|gb|AAY42113.1| pseudo-response regulator PPD-H1 [Hordeum vulgare subsp.
spontaneum]
Length = 676
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPD-M 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 140 IRR 142
RR
Sbjct: 163 WRR 165
>gi|379025890|dbj|BAL63722.1| pseudo-response regulator [Triticum dicoccoides]
Length = 660
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPD-M 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 36 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 95
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 96 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 155
Query: 140 IRR 142
RR
Sbjct: 156 WRR 158
>gi|220030910|gb|ACL78620.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031060|gb|ACL78695.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM-PDM 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 140 IRR 142
RR
Sbjct: 163 WRR 165
>gi|220030884|gb|ACL78607.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030908|gb|ACL78619.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM-PDM 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 140 IRR 142
RR
Sbjct: 163 WRR 165
>gi|379025488|dbj|BAL63521.1| pseudo-response regulator [Triticum polonicum]
gi|379025734|dbj|BAL63644.1| pseudo-response regulator [Triticum durum]
Length = 668
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPD-M 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 97
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 140 IRR 142
RR
Sbjct: 158 WRR 160
>gi|220030902|gb|ACL78616.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030904|gb|ACL78617.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030922|gb|ACL78626.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030972|gb|ACL78651.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM-PDM 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 140 IRR 142
RR
Sbjct: 163 WRR 165
>gi|220030886|gb|ACL78608.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030892|gb|ACL78611.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030900|gb|ACL78615.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031030|gb|ACL78680.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031036|gb|ACL78683.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031052|gb|ACL78691.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031056|gb|ACL78693.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM-PDM 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 140 IRR 142
RR
Sbjct: 163 WRR 165
>gi|379025862|dbj|BAL63708.1| pseudo-response regulator [Triticum dicoccoides]
Length = 664
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPD-M 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 94
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 95 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 154
Query: 140 IRR 142
RR
Sbjct: 155 WRR 157
>gi|379025520|dbj|BAL63537.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025522|dbj|BAL63538.1| pseudo-response regulator [Triticum dicoccoides]
gi|456359208|dbj|BAM93433.1| pseudo-response regulator [Triticum dicoccoides]
Length = 668
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPD-M 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 97
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 140 IRR 142
RR
Sbjct: 158 WRR 160
>gi|302817481|ref|XP_002990416.1| pseudo response regulator [Selaginella moellendorffii]
gi|300141801|gb|EFJ08509.1| pseudo response regulator [Selaginella moellendorffii]
Length = 592
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 60/91 (65%)
Query: 189 QDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNV 248
+ G+E+ + + + +KK +V WTPELH+KFV AV QLGVDKA+P +IL+ M V
Sbjct: 327 EKGEEETKPERAAKSCKSAPGRKKMKVDWTPELHQKFVQAVEQLGVDKAIPSRILEHMGV 386
Query: 249 EGLTRENVASHLQKFRLYLKRLSNETPQAGM 279
+ LTR N+ASHLQK+R + K L +A +
Sbjct: 387 KCLTRHNIASHLQKYRSHRKHLLQREAEAAV 417
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 67/124 (54%), Gaps = 4/124 (3%)
Query: 20 FPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM 79
FP G+ VL D + + L++C Y VT AL + + + F + D
Sbjct: 12 FPKGLHVLVAIADGDDREEISGILQSCSYRVTAFTSEEDALAAIEKPKTPFHAAMVDATN 71
Query: 80 PDM-DGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQH 138
D+ DGFK+LE +L VIM+S+ D + +M+ I+ GA D+L KP E+LKNIWQH
Sbjct: 72 RDIFDGFKVLEAAK---ELAVIMISSTEDIETMMRAISLGAADFLQKPFSEEKLKNIWQH 128
Query: 139 VIRR 142
V R+
Sbjct: 129 VARK 132
>gi|456359262|dbj|BAM93460.1| pseudo-response regulator [Triticum dicoccoides]
Length = 665
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPD-M 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 36 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 95
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 96 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 155
Query: 140 IRR 142
RR
Sbjct: 156 WRR 158
>gi|379025940|dbj|BAL63747.1| pseudo-response regulator [Triticum carthlicum]
gi|456359264|dbj|BAM93461.1| pseudo-response regulator [Triticum dicoccoides]
Length = 664
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPD-M 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 94
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 95 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 154
Query: 140 IRR 142
RR
Sbjct: 155 WRR 157
>gi|379025838|dbj|BAL63696.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025840|dbj|BAL63697.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025842|dbj|BAL63698.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025844|dbj|BAL63699.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 661
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPD-M 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 94
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 95 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 154
Query: 140 IRR 142
RR
Sbjct: 155 WRR 157
>gi|295913207|gb|ADG57862.1| transcription factor [Lycoris longituba]
Length = 196
Score = 87.0 bits (214), Expect = 3e-14, Method: Composition-based stats.
Identities = 41/64 (64%), Positives = 49/64 (76%)
Query: 207 STTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLY 266
S +KK +V WTPELHR FV AV QLGVDKAVP +IL+LM + LTR N+ASHLQK+R +
Sbjct: 34 SHRKKKAKVDWTPELHRSFVQAVEQLGVDKAVPSRILELMGIVCLTRHNIASHLQKYRSH 93
Query: 267 LKRL 270
K L
Sbjct: 94 RKHL 97
>gi|220030790|gb|ACL78560.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 677
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM-PDM 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 140 IRR 142
RR
Sbjct: 163 WRR 165
>gi|118638628|gb|ABL09470.1| pseudo-response regulator [Triticum aestivum]
gi|118638630|gb|ABL09471.1| pseudo-response regulator [Triticum aestivum]
gi|118638632|gb|ABL09472.1| pseudo-response regulator [Triticum aestivum]
gi|118638634|gb|ABL09473.1| pseudo-response regulator [Triticum aestivum]
gi|118638636|gb|ABL09474.1| pseudo-response regulator [Triticum aestivum]
gi|118638638|gb|ABL09475.1| pseudo-response regulator [Triticum aestivum]
gi|118638640|gb|ABL09476.1| pseudo-response regulator [Triticum aestivum]
gi|159138015|gb|ABW89014.1| pseudo-response regulator [Triticum turgidum]
gi|159138017|gb|ABW89015.1| pseudo-response regulator [Triticum turgidum]
gi|159138019|gb|ABW89016.1| pseudo-response regulator [Triticum turgidum]
gi|159138021|gb|ABW89017.1| pseudo-response regulator [Triticum turgidum]
gi|379025772|dbj|BAL63663.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025774|dbj|BAL63664.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025776|dbj|BAL63665.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025780|dbj|BAL63667.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025782|dbj|BAL63668.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025784|dbj|BAL63669.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025786|dbj|BAL63670.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025788|dbj|BAL63671.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025790|dbj|BAL63672.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025792|dbj|BAL63673.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025794|dbj|BAL63674.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025796|dbj|BAL63675.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025800|dbj|BAL63677.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025802|dbj|BAL63678.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025804|dbj|BAL63679.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025806|dbj|BAL63680.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025808|dbj|BAL63681.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025810|dbj|BAL63682.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025812|dbj|BAL63683.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025814|dbj|BAL63684.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025816|dbj|BAL63685.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025818|dbj|BAL63686.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025820|dbj|BAL63687.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025822|dbj|BAL63688.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025824|dbj|BAL63689.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025826|dbj|BAL63690.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025828|dbj|BAL63691.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025830|dbj|BAL63692.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025832|dbj|BAL63693.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025834|dbj|BAL63694.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025836|dbj|BAL63695.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025850|dbj|BAL63702.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025852|dbj|BAL63703.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025854|dbj|BAL63704.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025864|dbj|BAL63709.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025866|dbj|BAL63710.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025868|dbj|BAL63711.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025870|dbj|BAL63712.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025872|dbj|BAL63713.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025874|dbj|BAL63714.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025876|dbj|BAL63715.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025878|dbj|BAL63716.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025880|dbj|BAL63717.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025882|dbj|BAL63718.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025884|dbj|BAL63719.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025886|dbj|BAL63720.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025888|dbj|BAL63721.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025892|dbj|BAL63723.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025912|dbj|BAL63733.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025914|dbj|BAL63734.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025916|dbj|BAL63735.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025918|dbj|BAL63736.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025920|dbj|BAL63737.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025922|dbj|BAL63738.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025926|dbj|BAL63740.1| pseudo-response regulator [Triticum turgidum]
gi|379025928|dbj|BAL63741.1| pseudo-response regulator [Triticum turgidum]
gi|379025930|dbj|BAL63742.1| pseudo-response regulator [Triticum turgidum]
gi|379025932|dbj|BAL63743.1| pseudo-response regulator [Triticum turgidum]
gi|379025934|dbj|BAL63744.1| pseudo-response regulator [Triticum carthlicum]
gi|379025938|dbj|BAL63746.1| pseudo-response regulator [Triticum carthlicum]
gi|379025942|dbj|BAL63748.1| pseudo-response regulator [Triticum carthlicum]
gi|379025944|dbj|BAL63749.1| pseudo-response regulator [Triticum durum]
gi|379025946|dbj|BAL63750.1| pseudo-response regulator [Triticum durum]
gi|379025948|dbj|BAL63751.1| pseudo-response regulator [Triticum durum]
gi|379025950|dbj|BAL63752.1| pseudo-response regulator [Triticum durum]
gi|379025952|dbj|BAL63753.1| pseudo-response regulator [Triticum durum]
gi|379025954|dbj|BAL63754.1| pseudo-response regulator [Triticum durum]
gi|379025956|dbj|BAL63755.1| pseudo-response regulator [Triticum durum]
gi|379025958|dbj|BAL63756.1| pseudo-response regulator [Triticum durum]
gi|379025960|dbj|BAL63757.1| pseudo-response regulator [Triticum durum]
gi|379025962|dbj|BAL63758.1| pseudo-response regulator [Triticum durum]
gi|379025964|dbj|BAL63759.1| pseudo-response regulator [Triticum durum]
gi|379025966|dbj|BAL63760.1| pseudo-response regulator [Triticum durum]
gi|379025968|dbj|BAL63761.1| pseudo-response regulator [Triticum durum]
gi|379025970|dbj|BAL63762.1| pseudo-response regulator [Triticum durum]
gi|379025972|dbj|BAL63763.1| pseudo-response regulator [Triticum durum]
gi|379025974|dbj|BAL63764.1| pseudo-response regulator [Triticum durum]
gi|379025976|dbj|BAL63765.1| pseudo-response regulator [Triticum durum]
gi|379025978|dbj|BAL63766.1| pseudo-response regulator [Triticum durum]
gi|379025980|dbj|BAL63767.1| pseudo-response regulator [Triticum durum]
gi|379025982|dbj|BAL63768.1| pseudo-response regulator [Triticum durum]
gi|379025984|dbj|BAL63769.1| pseudo-response regulator [Triticum durum]
gi|379025986|dbj|BAL63770.1| pseudo-response regulator [Triticum durum]
gi|379025988|dbj|BAL63771.1| pseudo-response regulator [Triticum durum]
gi|379025990|dbj|BAL63772.1| pseudo-response regulator [Triticum durum]
gi|379025992|dbj|BAL63773.1| pseudo-response regulator [Triticum durum]
gi|379025994|dbj|BAL63774.1| pseudo-response regulator [Triticum durum]
gi|379025996|dbj|BAL63775.1| pseudo-response regulator [Triticum durum]
gi|379025998|dbj|BAL63776.1| pseudo-response regulator [Triticum durum]
gi|379026000|dbj|BAL63777.1| pseudo-response regulator [Triticum durum]
gi|379026002|dbj|BAL63778.1| pseudo-response regulator [Triticum durum]
gi|379026004|dbj|BAL63779.1| pseudo-response regulator [Triticum durum]
gi|379026006|dbj|BAL63780.1| pseudo-response regulator [Triticum durum]
gi|379026008|dbj|BAL63781.1| pseudo-response regulator [Triticum durum]
gi|379026010|dbj|BAL63782.1| pseudo-response regulator [Triticum durum]
gi|379026012|dbj|BAL63783.1| pseudo-response regulator [Triticum durum]
gi|379026062|dbj|BAL63808.1| pseudo-response regulator [Triticum durum]
gi|379026064|dbj|BAL63809.1| pseudo-response regulator [Triticum durum]
gi|379026066|dbj|BAL63810.1| pseudo-response regulator [Triticum durum]
gi|379026068|dbj|BAL63811.1| pseudo-response regulator [Triticum durum]
gi|379026070|dbj|BAL63812.1| pseudo-response regulator [Triticum durum]
gi|379026084|dbj|BAL63819.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|383215300|gb|AFG73164.1| pseudo-response regulator [Triticum aestivum]
gi|395759121|dbj|BAM31257.1| pseudo-response regulator [Triticum aestivum]
gi|395759123|dbj|BAM31258.1| pseudo-response regulator [Triticum aestivum]
gi|456359244|dbj|BAM93451.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359246|dbj|BAM93452.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359270|dbj|BAM93464.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359272|dbj|BAM93465.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359274|dbj|BAM93466.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359276|dbj|BAM93467.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359278|dbj|BAM93468.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359280|dbj|BAM93469.1| pseudo-response regulator [Triticum ispahanicum]
gi|456359282|dbj|BAM93470.1| pseudo-response regulator [Triticum ispahanicum]
gi|456359284|dbj|BAM93471.1| pseudo-response regulator [Triticum turgidum subsp. paleocolchicum]
gi|456359286|dbj|BAM93472.1| pseudo-response regulator [Triticum turgidum subsp. paleocolchicum]
Length = 664
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPD-M 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 94
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 95 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 154
Query: 140 IRR 142
RR
Sbjct: 155 WRR 157
>gi|379025798|dbj|BAL63676.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 664
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPD-M 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 94
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 95 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 154
Query: 140 IRR 142
RR
Sbjct: 155 WRR 157
>gi|449439291|ref|XP_004137419.1| PREDICTED: two-component response regulator-like APRR1-like
[Cucumis sativus]
Length = 557
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 91/186 (48%), Gaps = 12/186 (6%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+R+L D+D + + L C Y+V + A + L D+++S+V +P
Sbjct: 32 VRILLCDNDSKSSEEVFKLLLKCSYQVISVSSARQVIDALNAEGPEIDIILSEVDLPMAK 91
Query: 84 GFKLLEHVGLEMDL---PVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
G K+L+++ + +L PVIM+S + +V+K + GA DYL+KP+R EL N+W H+
Sbjct: 92 GMKMLKYITRDKELRRIPVIMMSTQDEVPIVVKCLRLGAADYLVKPLRTNELLNLWTHMW 151
Query: 141 RRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTG--NSDQNGKSNRKRKDQDG------- 191
RR++ + +LN E V + ST + D + KS R + G
Sbjct: 152 RRRRTLGLAEKNILNYEFDLVASDPSDANTNSTTLFSDDTDDKSRRSTNPEMGITAPATH 211
Query: 192 DEDEDG 197
EDE G
Sbjct: 212 QEDEPG 217
>gi|220030970|gb|ACL78650.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM-PDM 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 140 IRR 142
RR
Sbjct: 163 WRR 165
>gi|220030906|gb|ACL78618.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030928|gb|ACL78629.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM-PDM 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 140 IRR 142
RR
Sbjct: 163 WRR 165
>gi|220030882|gb|ACL78606.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030896|gb|ACL78613.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030920|gb|ACL78625.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031032|gb|ACL78681.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM-PDM 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 140 IRR 142
RR
Sbjct: 163 WRR 165
>gi|220031022|gb|ACL78676.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM-PDM 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 140 IRR 142
RR
Sbjct: 163 WRR 165
>gi|118638616|gb|ABL09464.1| pseudo-response regulator [Triticum aestivum]
gi|118638620|gb|ABL09466.1| pseudo-response regulator [Triticum aestivum]
gi|118638622|gb|ABL09467.1| pseudo-response regulator [Triticum aestivum]
gi|379025454|dbj|BAL63504.1| pseudo-response regulator [Triticum turgidum]
gi|379025456|dbj|BAL63505.1| pseudo-response regulator [Triticum turgidum]
gi|379025458|dbj|BAL63506.1| pseudo-response regulator [Triticum turgidum]
gi|379025460|dbj|BAL63507.1| pseudo-response regulator [Triticum turgidum]
gi|379025462|dbj|BAL63508.1| pseudo-response regulator [Triticum turgidum]
gi|379025464|dbj|BAL63509.1| pseudo-response regulator [Triticum carthlicum]
gi|379025466|dbj|BAL63510.1| pseudo-response regulator [Triticum carthlicum]
gi|379025468|dbj|BAL63511.1| pseudo-response regulator [Triticum carthlicum]
gi|379025470|dbj|BAL63512.1| pseudo-response regulator [Triticum carthlicum]
gi|379025472|dbj|BAL63513.1| pseudo-response regulator [Triticum carthlicum]
gi|379025474|dbj|BAL63514.1| pseudo-response regulator [Triticum turanicum]
gi|379025476|dbj|BAL63515.1| pseudo-response regulator [Triticum turanicum]
gi|379025478|dbj|BAL63516.1| pseudo-response regulator [Triticum turanicum]
gi|379025482|dbj|BAL63518.1| pseudo-response regulator [Triticum turanicum]
gi|379025490|dbj|BAL63522.1| pseudo-response regulator [Triticum polonicum]
gi|379025492|dbj|BAL63523.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025494|dbj|BAL63524.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025496|dbj|BAL63525.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025498|dbj|BAL63526.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025500|dbj|BAL63527.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025502|dbj|BAL63528.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025512|dbj|BAL63533.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025514|dbj|BAL63534.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025518|dbj|BAL63536.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025528|dbj|BAL63541.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025534|dbj|BAL63544.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025538|dbj|BAL63546.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025540|dbj|BAL63547.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025568|dbj|BAL63561.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025570|dbj|BAL63562.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025572|dbj|BAL63563.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025698|dbj|BAL63626.1| pseudo-response regulator [Triticum durum]
gi|379025700|dbj|BAL63627.1| pseudo-response regulator [Triticum durum]
gi|379025702|dbj|BAL63628.1| pseudo-response regulator [Triticum durum]
gi|379025704|dbj|BAL63629.1| pseudo-response regulator [Triticum durum]
gi|379025706|dbj|BAL63630.1| pseudo-response regulator [Triticum durum]
gi|379025708|dbj|BAL63631.1| pseudo-response regulator [Triticum durum]
gi|379025710|dbj|BAL63632.1| pseudo-response regulator [Triticum durum]
gi|379025712|dbj|BAL63633.1| pseudo-response regulator [Triticum durum]
gi|379025714|dbj|BAL63634.1| pseudo-response regulator [Triticum durum]
gi|379025716|dbj|BAL63635.1| pseudo-response regulator [Triticum durum]
gi|379025718|dbj|BAL63636.1| pseudo-response regulator [Triticum durum]
gi|379025720|dbj|BAL63637.1| pseudo-response regulator [Triticum durum]
gi|379025722|dbj|BAL63638.1| pseudo-response regulator [Triticum durum]
gi|379025724|dbj|BAL63639.1| pseudo-response regulator [Triticum durum]
gi|379025726|dbj|BAL63640.1| pseudo-response regulator [Triticum durum]
gi|379025728|dbj|BAL63641.1| pseudo-response regulator [Triticum durum]
gi|379025730|dbj|BAL63642.1| pseudo-response regulator [Triticum durum]
gi|379025732|dbj|BAL63643.1| pseudo-response regulator [Triticum durum]
gi|395759117|dbj|BAM31255.1| pseudo-response regulator [Triticum aestivum]
gi|395759119|dbj|BAM31256.1| pseudo-response regulator [Triticum aestivum]
gi|456359198|dbj|BAM93428.1| pseudo-response regulator [Triticum turgidum subsp. pyramidale]
Length = 668
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPD-M 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 97
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 140 IRR 142
RR
Sbjct: 158 WRR 160
>gi|220030880|gb|ACL78605.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 677
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM-PDM 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 140 IRR 142
RR
Sbjct: 163 WRR 165
>gi|379026042|dbj|BAL63798.1| pseudo-response regulator [Triticum durum]
Length = 665
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPD-M 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 36 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 95
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 96 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 155
Query: 140 IRR 142
RR
Sbjct: 156 WRR 158
>gi|379025768|dbj|BAL63661.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025770|dbj|BAL63662.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025894|dbj|BAL63724.1| pseudo-response regulator [Triticum turanicum]
gi|379025896|dbj|BAL63725.1| pseudo-response regulator [Triticum turanicum]
gi|379025898|dbj|BAL63726.1| pseudo-response regulator [Triticum turanicum]
gi|379025900|dbj|BAL63727.1| pseudo-response regulator [Triticum turanicum]
gi|379025902|dbj|BAL63728.1| pseudo-response regulator [Triticum turanicum]
gi|379025910|dbj|BAL63732.1| pseudo-response regulator [Triticum polonicum]
gi|379025936|dbj|BAL63745.1| pseudo-response regulator [Triticum carthlicum]
gi|379026026|dbj|BAL63790.1| pseudo-response regulator [Triticum durum]
gi|379026028|dbj|BAL63791.1| pseudo-response regulator [Triticum durum]
gi|379026030|dbj|BAL63792.1| pseudo-response regulator [Triticum durum]
gi|379026032|dbj|BAL63793.1| pseudo-response regulator [Triticum durum]
gi|379026034|dbj|BAL63794.1| pseudo-response regulator [Triticum durum]
gi|379026036|dbj|BAL63795.1| pseudo-response regulator [Triticum durum]
gi|379026038|dbj|BAL63796.1| pseudo-response regulator [Triticum durum]
gi|379026040|dbj|BAL63797.1| pseudo-response regulator [Triticum durum]
gi|379026044|dbj|BAL63799.1| pseudo-response regulator [Triticum durum]
gi|379026046|dbj|BAL63800.1| pseudo-response regulator [Triticum durum]
gi|379026048|dbj|BAL63801.1| pseudo-response regulator [Triticum durum]
gi|379026050|dbj|BAL63802.1| pseudo-response regulator [Triticum durum]
gi|379026052|dbj|BAL63803.1| pseudo-response regulator [Triticum durum]
gi|379026054|dbj|BAL63804.1| pseudo-response regulator [Triticum durum]
gi|379026056|dbj|BAL63805.1| pseudo-response regulator [Triticum durum]
gi|379026058|dbj|BAL63806.1| pseudo-response regulator [Triticum durum]
gi|379026060|dbj|BAL63807.1| pseudo-response regulator [Triticum durum]
gi|379026072|dbj|BAL63813.1| pseudo-response regulator [Triticum durum]
gi|379026074|dbj|BAL63814.1| pseudo-response regulator [Triticum durum]
gi|379026076|dbj|BAL63815.1| pseudo-response regulator [Triticum durum]
gi|379026078|dbj|BAL63816.1| pseudo-response regulator [Triticum durum]
gi|379026080|dbj|BAL63817.1| pseudo-response regulator [Triticum durum]
gi|456359288|dbj|BAM93473.1| pseudo-response regulator [Triticum turgidum subsp. pyramidale]
Length = 665
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPD-M 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 36 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 95
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 96 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 155
Query: 140 IRR 142
RR
Sbjct: 156 WRR 158
>gi|220031016|gb|ACL78673.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031020|gb|ACL78675.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031024|gb|ACL78677.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM-PDM 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 140 IRR 142
RR
Sbjct: 163 WRR 165
>gi|456359290|dbj|BAM93474.1| pseudo-response regulator [Triticum turgidum subsp. pyramidale]
Length = 664
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPD-M 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 35 IRVLLVETDDSTQQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 94
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 95 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 154
Query: 140 IRR 142
RR
Sbjct: 155 WRR 157
>gi|375126877|gb|AFA35965.1| timing of cab expression 1/pseudo-response regulator 1 [Nicotiana
attenuata]
Length = 551
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 76/135 (56%), Gaps = 5/135 (3%)
Query: 14 DGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLV 73
+G ID+ + R+L D D + + L C Y+VT + L D++
Sbjct: 11 EGFIDRSKV--RILLCDKDAKSSQEVFTLLCKCSYQVTSARSPRQVIDALNAEGPEIDII 68
Query: 74 ISDVHMPDMDGFKLLEHVGLEMDL---PVIMLSAYGDTKLVMKGITHGACDYLLKPVRIE 130
+S+V +P G+K+L+++ + +L PVIM+SA + +V+K + GA DYL+KP+R
Sbjct: 69 LSEVDLPMSKGYKMLKYIMRDKELRRIPVIMMSAQDEVSIVVKCLKFGAADYLVKPLRTN 128
Query: 131 ELKNIWQHVIRRKKV 145
EL N+W H+ RR+++
Sbjct: 129 ELLNLWTHMWRRRQM 143
>gi|302754156|ref|XP_002960502.1| hypothetical protein SELMODRAFT_402806 [Selaginella moellendorffii]
gi|300171441|gb|EFJ38041.1| hypothetical protein SELMODRAFT_402806 [Selaginella moellendorffii]
Length = 271
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 68/126 (53%), Gaps = 12/126 (9%)
Query: 163 AGEGGQGAMSTGNS-----DQNGKSNRKRKDQDGDEDEDGDD-------DGHENEDSTTQ 210
AGE G +++ N D+ R D G D + + + E S T
Sbjct: 54 AGESVNGQLTSSNDEVTLDDELESIQRSASDHSGTVDAAQQEQHMQRVENCRKKERSLTT 113
Query: 211 KKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKRL 270
KK +V W P+LHR FV V +LG++KA+P +IL++M VE LTR NVASHLQK+R KR
Sbjct: 114 KKTKVDWNPDLHRLFVQTVEELGLEKAIPSRILEIMGVESLTRHNVASHLQKYRAQRKRK 173
Query: 271 SNETPQ 276
E+ Q
Sbjct: 174 RAESKQ 179
>gi|395216223|ref|ZP_10401240.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Pontibacter sp. BAB1700]
gi|394455509|gb|EJF09975.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Pontibacter sp. BAB1700]
Length = 433
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 66/108 (61%), Gaps = 3/108 (2%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
R+L +DDDPT +L FL+ QYEV A L L+ + +FDL+++D +PD +G
Sbjct: 3 RILLIDDDPTFCLMLSTFLKRQQYEVKTAYTAGEGLSQLKAD--SFDLILTDFRLPDKNG 60
Query: 85 FKLLEHVG-LEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEE 131
+LLE + L+ +PVI+++ Y D + +K I GA +YL KP+ +E
Sbjct: 61 LELLEQIRVLDTQVPVILMTHYADIRTAVKAIKMGAFEYLAKPINPDE 108
>gi|326522234|dbj|BAK07579.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 522
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 72/125 (57%), Gaps = 3/125 (2%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+R+L D DP + + L C Y+VT + +L D+++++V +P
Sbjct: 31 VRILLCDSDPDSSQDVLRLLCNCSYQVTCAKSPRQVINVLNCEGAEIDIILAEVDLPVSK 90
Query: 84 GFKLLEHVGLEMDL---PVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
FK+L+++G +L P+IM+S + +V+K + GA +YL+KP+R+ EL N+W HV
Sbjct: 91 CFKMLKYIGRNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLWTHVW 150
Query: 141 RRKKV 145
RR+++
Sbjct: 151 RRRRM 155
>gi|326531994|dbj|BAK01373.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|364285651|gb|AEW48243.1| timing of cab expression 1 [Hordeum vulgare subsp. vulgare]
Length = 522
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 72/125 (57%), Gaps = 3/125 (2%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+R+L D DP + + L C Y+VT + +L D+++++V +P
Sbjct: 31 VRILLCDSDPDSSQDVLRLLCNCSYQVTCAKSPRQVINVLNCEGAEIDIILAEVDLPVSK 90
Query: 84 GFKLLEHVGLEMDL---PVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
FK+L+++G +L P+IM+S + +V+K + GA +YL+KP+R+ EL N+W HV
Sbjct: 91 CFKMLKYIGRNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLWTHVW 150
Query: 141 RRKKV 145
RR+++
Sbjct: 151 RRRRM 155
>gi|153004853|ref|YP_001379178.1| response regulator receiver modulated metal dependent
phosphohydrolase [Anaeromyxobacter sp. Fw109-5]
gi|152028426|gb|ABS26194.1| response regulator receiver modulated metal dependent
phosphohydrolase [Anaeromyxobacter sp. Fw109-5]
Length = 357
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 71/122 (58%), Gaps = 3/122 (2%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
R+L VDDD + V+ L Y VT + A AL R +F LVISDV MP DG
Sbjct: 10 RILIVDDDTSVRDVIAVLLGEEGYAVTAVSSAEAALDAAR--LTDFSLVISDVRMPGKDG 67
Query: 85 FKLLEHVG-LEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRK 143
F LLE V L D VIML+A+GDT+ ++ + +GA DYLLKP ++ +L + + R+
Sbjct: 68 FWLLERVRELHPDTAVIMLTAFGDTEAAVECLRNGAADYLLKPPKVTDLIRAIERALGRR 127
Query: 144 KV 145
++
Sbjct: 128 RL 129
>gi|330447454|ref|ZP_08311103.1| HAMP domain protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
gi|328491645|dbj|GAA05600.1| HAMP domain protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
Length = 1114
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 76/144 (52%), Gaps = 6/144 (4%)
Query: 21 PIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMP 80
P G +L VDD+P L++L NFLR Y V AL M+ E R DL++ D+ MP
Sbjct: 702 PNGDLILVVDDEPVNLQILNNFLRLAGYRVKTAENGPQALAMVEEQRP--DLILLDIMMP 759
Query: 81 DMDGFK---LLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEEL-KNIW 136
+M G++ +L +LP++MLSA G + +KG GA DYL KP EEL I
Sbjct: 760 EMSGYEVCTILRKQYSIFELPIMMLSALGQIQDRIKGFECGANDYLTKPFNKEELIARIQ 819
Query: 137 QHVIRRKKVGPKDQNKLLNQENSR 160
++ K K +N+ L QE R
Sbjct: 820 AYLQASKTEHEKQKNQSLQQEIHR 843
>gi|118638626|gb|ABL09469.1| truncated pseudo-response regulator [Triticum aestivum]
gi|383215295|gb|AFG73160.1| pseudo-response regulator [Triticum aestivum]
Length = 432
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPD-M 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 94
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 95 SGIDLLGRIMNHEVCKDIPVIMMSSHNSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 154
Query: 140 IRR 142
RR
Sbjct: 155 WRR 157
>gi|224132880|ref|XP_002327903.1| predicted protein [Populus trichocarpa]
gi|222837312|gb|EEE75691.1| predicted protein [Populus trichocarpa]
Length = 147
Score = 86.3 bits (212), Expect = 4e-14, Method: Composition-based stats.
Identities = 39/65 (60%), Positives = 49/65 (75%)
Query: 214 RVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKRLSNE 273
+V WTPELHR+FV AV QLGVDKAVP +IL+LM ++ LTR N+ASHLQK+R + K L
Sbjct: 2 KVDWTPELHRRFVQAVEQLGVDKAVPSRILELMGIDCLTRHNIASHLQKYRSHQKHLLAR 61
Query: 274 TPQAG 278
+A
Sbjct: 62 EAEAA 66
>gi|379025542|dbj|BAL63548.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 668
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPD-M 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 97
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PV+M+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVVMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 140 IRR 142
RR
Sbjct: 158 WRR 160
>gi|359491315|ref|XP_002281757.2| PREDICTED: two-component response regulator-like APRR1-like [Vitis
vinifera]
Length = 556
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 85/164 (51%), Gaps = 3/164 (1%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+R+L D+D + L C Y+VT A + L ++ D+++++V +P
Sbjct: 27 VRILLCDNDTKSSDEIFTLLCGCSYQVTSVRSARQVIDALNAEGHDIDIILAEVDLPMTK 86
Query: 84 GFKLLEHVGLEMDL---PVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
G K+L+++ + +L P+IM+SA + +V+K + GA DYL+KP+R EL N+W H+
Sbjct: 87 GMKMLKYIMRDKELRRIPIIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 146
Query: 141 RRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNR 184
RR+++ + +LN + + ST SD +R
Sbjct: 147 RRRRMLGLAEKNILNYDFDVAASDPSDANTNSTMFSDDTDDKSR 190
>gi|195607208|gb|ACG25434.1| transcription factor ZmGLK1 [Zea mays]
Length = 460
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 52/72 (72%)
Query: 210 QKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKR 269
++K +V WTPELHR+FV AV QLG+DKAVP +IL++M + LTR N+ASHLQK+R + K
Sbjct: 181 KRKVKVDWTPELHRRFVQAVEQLGIDKAVPSRILEIMGTDCLTRHNIASHLQKYRSHRKH 240
Query: 270 LSNETPQAGMVA 281
L +A A
Sbjct: 241 LMAREAEAATWA 252
>gi|364285649|gb|AEW48242.1| timing of cab expression 1 [Hordeum vulgare subsp. vulgare]
Length = 522
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 72/125 (57%), Gaps = 3/125 (2%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+R+L D DP + + L C Y+VT + +L D+++++V +P
Sbjct: 31 VRILLCDSDPDSSQDVLRLLCNCSYQVTCAKSPRQVINVLNCEGAEIDIILAEVDLPVSK 90
Query: 84 GFKLLEHVGLEMDL---PVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
FK+L+++G +L P+IM+S + +V+K + GA +YL+KP+R+ EL N+W HV
Sbjct: 91 CFKMLKYIGRNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLWTHVW 150
Query: 141 RRKKV 145
RR+++
Sbjct: 151 RRRRM 155
>gi|162459635|ref|NP_001105513.1| golden plant2 [Zea mays]
gi|11177540|gb|AAG32325.1|AF298118_1 putative transcription factor Golden2 [Zea mays]
gi|13940494|gb|AAK50391.1|AF318579_1 putative transcription factor GOLDEN 2 [Zea mays]
gi|223946903|gb|ACN27535.1| unknown [Zea mays]
gi|414875563|tpg|DAA52694.1| TPA: golden plant2 [Zea mays]
Length = 461
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 52/72 (72%)
Query: 210 QKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKR 269
++K +V WTPELHR+FV AV QLG+DKAVP +IL++M + LTR N+ASHLQK+R + K
Sbjct: 182 KRKVKVDWTPELHRRFVQAVEQLGIDKAVPSRILEIMGTDCLTRHNIASHLQKYRSHRKH 241
Query: 270 LSNETPQAGMVA 281
L +A A
Sbjct: 242 LMAREAEAATWA 253
>gi|281308392|gb|ADA58344.1| pseudo-response regulator 1b [Brassica rapa]
Length = 509
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 78/139 (56%), Gaps = 7/139 (5%)
Query: 12 CEDGD--IDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNN 69
C+ GD ID+ + R+L D+D L + L C Y+VT A + L +
Sbjct: 7 CKGGDGFIDRSRV--RILLCDNDSKSLGDVFTLLSQCSYQVTSVKSARQVIDALNAEGPD 64
Query: 70 FDLVISDVHMPDMDGFKLLEHVGLEMDL---PVIMLSAYGDTKLVMKGITHGACDYLLKP 126
D++++++ +P G K+L ++ + DL PVIM+S + +V+K + GA DYL+KP
Sbjct: 65 IDIILAEIDLPMAKGMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAADYLVKP 124
Query: 127 VRIEELKNIWQHVIRRKKV 145
+R EL N+W ++ RR+++
Sbjct: 125 LRTNELLNLWTYMWRRRRM 143
>gi|195614160|gb|ACG28910.1| transcription factor ZmGLK1 [Zea mays]
Length = 461
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 52/72 (72%)
Query: 210 QKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKR 269
++K +V WTPELHR+FV AV QLG+DKAVP +IL++M + LTR N+ASHLQK+R + K
Sbjct: 182 KRKVKVDWTPELHRRFVQAVEQLGIDKAVPSRILEIMGTDCLTRHNIASHLQKYRSHRKH 241
Query: 270 LSNETPQAGMVA 281
L +A A
Sbjct: 242 LMAREAEAATWA 253
>gi|326520958|dbj|BAJ92842.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 402
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 74/131 (56%), Gaps = 8/131 (6%)
Query: 166 GGQGAMSTGNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKF 225
G G +T +++ + K ++ ++D D+D++G + S +KPR W PELHR+F
Sbjct: 190 GDSGDKATSDTEVHDKDSKDATEKDTDKDKEG-------QSSQPNRKPRRCWAPELHRRF 242
Query: 226 VGAVNQLGVDK-AVPKKILDLMNVEGLTRENVASHLQKFRLYLKRLSNETPQAGMVAALG 284
+ A+ QLG A PK+I +LM V+GLT + V SHLQK+RL+ R + T Q+ A
Sbjct: 243 LQALQQLGGSHVATPKQIRELMKVDGLTNDEVKSHLQKYRLHTSRRPSSTAQSSGAATTT 302
Query: 285 SKDSSYLRIGA 295
+ +G+
Sbjct: 303 QPAPQFFVVGS 313
>gi|397911978|gb|AFO69282.1| pseudo-response regulator 1, partial [Hordeum vulgare]
Length = 491
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 71/124 (57%), Gaps = 3/124 (2%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
R+L D DP + + L C Y+VT + +L D+++++V +P
Sbjct: 1 RILLCDSDPDSSQDVLRLLCNCSYQVTCAKSPRQVINVLNCEGAEIDIILAEVDLPVSKC 60
Query: 85 FKLLEHVGLEMDL---PVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIR 141
FK+L+++G +L P+IM+S + +V+K + GA +YL+KP+R+ EL N+W HV R
Sbjct: 61 FKMLKYIGRNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLWTHVWR 120
Query: 142 RKKV 145
R+++
Sbjct: 121 RRRM 124
>gi|456359112|dbj|BAM93385.1| pseudo-response regulator [Triticum monococcum subsp. aegilopoides]
gi|456359118|dbj|BAM93388.1| pseudo-response regulator [Triticum monococcum subsp. monococcum]
Length = 662
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPD-M 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 31 IRVLLVETDDSTRQVVIALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 90
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 91 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 150
Query: 140 IRR 142
RR
Sbjct: 151 WRR 153
>gi|395759127|dbj|BAM31260.1| pseudo-response regulator [Triticum aestivum]
Length = 469
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPD-M 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 32 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 91
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 92 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 151
Query: 140 IRR 142
RR
Sbjct: 152 WRR 154
>gi|297733942|emb|CBI15189.3| unnamed protein product [Vitis vinifera]
Length = 533
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 85/164 (51%), Gaps = 3/164 (1%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+R+L D+D + L C Y+VT A + L ++ D+++++V +P
Sbjct: 25 VRILLCDNDTKSSDEIFTLLCGCSYQVTSVRSARQVIDALNAEGHDIDIILAEVDLPMTK 84
Query: 84 GFKLLEHVGLEMDL---PVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
G K+L+++ + +L P+IM+SA + +V+K + GA DYL+KP+R EL N+W H+
Sbjct: 85 GMKMLKYIMRDKELRRIPIIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 144
Query: 141 RRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNR 184
RR+++ + +LN + + ST SD +R
Sbjct: 145 RRRRMLGLAEKNILNYDFDVAASDPSDANTNSTMFSDDTDDKSR 188
>gi|323388709|gb|ADX60159.1| pseudoARR-B transcription factor [Zea mays]
gi|413923083|gb|AFW63015.1| two-component response regulator-like PRR1 [Zea mays]
Length = 515
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 78/144 (54%), Gaps = 6/144 (4%)
Query: 5 ERMGSAGCEDGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLR 64
+R+G G + +D+ + R+L D D T + + L C Y VT + +L
Sbjct: 8 DRVGVGGAQQF-VDRSKV--RILLCDGDATSSREVLRLLCNCSYHVTCAKSPRQVINILN 64
Query: 65 ENRNNFDLVISDVHMPDMDGFKLLEHVGLEMDL---PVIMLSAYGDTKLVMKGITHGACD 121
D+++++V +P FK+L+++ DL P+IM+S + +V+K + GA +
Sbjct: 65 YEGGEIDIILAEVDLPVSKCFKMLKYIARNKDLRHIPIIMMSNRDEVSVVVKCLRLGAAE 124
Query: 122 YLLKPVRIEELKNIWQHVIRRKKV 145
YL+KP+R EL N+W HV RR+++
Sbjct: 125 YLVKPLRTNELLNLWTHVWRRRRM 148
>gi|410462149|ref|ZP_11315750.1| response regulator (CheY-like receiver, AAA-type ATPase and
DNA-binding domain containing protein) [Desulfovibrio
magneticus str. Maddingley MBC34]
gi|409984732|gb|EKO41020.1| response regulator (CheY-like receiver, AAA-type ATPase and
DNA-binding domain containing protein) [Desulfovibrio
magneticus str. Maddingley MBC34]
Length = 460
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 66/108 (61%), Gaps = 3/108 (2%)
Query: 26 VLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDGF 85
+L VDDDP L+VLE L + Y+V N + AL++L +R LVISD+ MP MDG
Sbjct: 12 ILVVDDDPHILEVLEVRLVSAGYDVVAANNGLEALEVL--SRQPVRLVISDMRMPGMDGM 69
Query: 86 KLLEHVGLE-MDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEEL 132
++LE + + LP+I L+A+G ++ I HGA DYL KP +EL
Sbjct: 70 RMLEEMERRGIKLPIIFLTAHGSIPGAVEAIKHGAVDYLTKPFDGQEL 117
>gi|85860540|ref|YP_462742.1| sigma-54-dependent transcriptional regulator [Syntrophus
aciditrophicus SB]
gi|85723631|gb|ABC78574.1| sigma-54-dependent transcriptional regulator [Syntrophus
aciditrophicus SB]
Length = 443
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 71/120 (59%), Gaps = 4/120 (3%)
Query: 22 IGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPD 81
+ +R++ +DDD + L+ LR Y+V + A LK + + +DLVISD+ MPD
Sbjct: 1 MSIRIIVIDDDAVACEFLQEALRRADYDVDICTSARDVLK---GDLSRYDLVISDIRMPD 57
Query: 82 MDGFKLLEHVGLEMD-LPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
MDG +LL + + LPVI+++AYG + M+ + GA DY+ KP E ++N+ + V+
Sbjct: 58 MDGLQLLRRIHQQWPALPVILMTAYGSLESTMEALQLGAWDYISKPFSPEAIRNMVKKVL 117
>gi|316930963|gb|ADU60098.1| pseudo response regulator 1 [Zea mays]
Length = 515
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 69/125 (55%), Gaps = 3/125 (2%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+R+L D D T + + L C Y VT + +L D+++++V +P
Sbjct: 24 VRILLCDGDATSPREVLRLLCNCAYHVTCAKSPRQVINILNYEGGEIDIILAEVDLPVSK 83
Query: 84 GFKLLEHVGLEMDL---PVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
FK+L+++ DL P+IM+S + +V+K + GA +YL+KP+R EL N+W HV
Sbjct: 84 CFKMLKYIARNKDLRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRTNELLNLWTHVW 143
Query: 141 RRKKV 145
RR+++
Sbjct: 144 RRRRM 148
>gi|414875562|tpg|DAA52693.1| TPA: golden plant2 [Zea mays]
Length = 459
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 57/87 (65%), Gaps = 5/87 (5%)
Query: 200 DGHENEDSTTQK-----KPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRE 254
+GH ++ + K K +V WTPELHR+FV AV QLG+DKAVP +IL++M + LTR
Sbjct: 165 EGHSSKKKSAGKNSNGGKRKVDWTPELHRRFVQAVEQLGIDKAVPSRILEIMGTDCLTRH 224
Query: 255 NVASHLQKFRLYLKRLSNETPQAGMVA 281
N+ASHLQK+R + K L +A A
Sbjct: 225 NIASHLQKYRSHRKHLMAREAEAATWA 251
>gi|254000327|ref|YP_003052390.1| Fis family two component sigma54 specific transcriptional regulator
[Methylovorus glucosetrophus SIP3-4]
gi|253987006|gb|ACT51863.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Methylovorus glucosetrophus SIP3-4]
Length = 457
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 79/134 (58%), Gaps = 5/134 (3%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
R+LA+DD+P ++LE LR Y+ V AL +LRE DLV+SD+HMP MDG
Sbjct: 6 RILALDDEPNMRRLLEISLRQAGYQPVVAENGREALDILRE--GGADLVVSDLHMPVMDG 63
Query: 85 FKLLEHVGLE-MDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRK 143
+LL+ + E + +PVI+++A G+ + + GA DY+L+P +E L+ + +
Sbjct: 64 LQLLQAMQKEGLQVPVIIVTAQGEISTAVAAMKLGASDYILRPFDLETLEIAIERALSLS 123
Query: 144 KVGPKDQNKLLNQE 157
++ K +N+ L +E
Sbjct: 124 RL--KLENQFLREE 135
>gi|313202285|ref|YP_004040943.1| Fis family two component sigma54 specific transcriptional regulator
[Methylovorus sp. MP688]
gi|312441601|gb|ADQ85707.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Methylovorus sp. MP688]
Length = 457
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 79/134 (58%), Gaps = 5/134 (3%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
R+LA+DD+P ++LE LR Y+ V AL +LRE DLV+SD+HMP MDG
Sbjct: 6 RILALDDEPNMRRLLEISLRQAGYQPVVAENGREALDILRE--GGADLVVSDLHMPVMDG 63
Query: 85 FKLLEHVGLE-MDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRK 143
+LL+ + E + +PVI+++A G+ + + GA DY+L+P +E L+ + +
Sbjct: 64 LQLLQAMQKEGLQVPVIIVTAQGEISTAVAAMKLGASDYILRPFDLETLEIAIERALSLS 123
Query: 144 KVGPKDQNKLLNQE 157
++ K +N+ L +E
Sbjct: 124 RL--KLENQFLREE 135
>gi|226532758|ref|NP_001147823.1| LOC100281433 [Zea mays]
gi|195613968|gb|ACG28814.1| two-component response regulator-like PRR1 [Zea mays]
Length = 515
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 78/144 (54%), Gaps = 6/144 (4%)
Query: 5 ERMGSAGCEDGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLR 64
+R+G G + +D+ + R+L D D T + + L C Y VT + +L
Sbjct: 8 DRVGVGGAQQF-VDRSKV--RILLCDGDATSSREVLRLLCNCAYHVTCAKSPRQVVNILN 64
Query: 65 ENRNNFDLVISDVHMPDMDGFKLLEHVGLEMDL---PVIMLSAYGDTKLVMKGITHGACD 121
D+++++V +P FK+L+++ DL P+IM+S + +V+K + GA +
Sbjct: 65 YEGGEIDIILAEVDLPVSKCFKMLKYIARNKDLRHIPIIMMSNRDEVSVVVKCLRLGAAE 124
Query: 122 YLLKPVRIEELKNIWQHVIRRKKV 145
YL+KP+R EL N+W HV RR+++
Sbjct: 125 YLVKPLRTNELLNLWTHVWRRRRM 148
>gi|456359092|dbj|BAM93375.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359094|dbj|BAM93376.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359096|dbj|BAM93377.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359098|dbj|BAM93378.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359100|dbj|BAM93379.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359224|dbj|BAM93441.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 668
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPD-M 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV++++ M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEMFMHGGL 97
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 140 IRR 142
RR
Sbjct: 158 WRR 160
>gi|456359072|dbj|BAM93365.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359074|dbj|BAM93366.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359076|dbj|BAM93367.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359078|dbj|BAM93368.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359080|dbj|BAM93369.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359082|dbj|BAM93370.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359084|dbj|BAM93371.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359086|dbj|BAM93372.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359088|dbj|BAM93373.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
Length = 668
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPD-M 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV++++ M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEMFMHGGL 97
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 140 IRR 142
RR
Sbjct: 158 WRR 160
>gi|456359110|dbj|BAM93384.1| pseudo-response regulator [Triticum monococcum subsp. aegilopoides]
Length = 662
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPD-M 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 31 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 90
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 91 SGIDLLGRIMNHEVCKDIPVIMMSSHDLMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 150
Query: 140 IRR 142
RR
Sbjct: 151 WRR 153
>gi|379025574|dbj|BAL63564.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 668
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPD-M 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV++++ M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEMFMHGGL 97
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 140 IRR 142
RR
Sbjct: 158 WRR 160
>gi|149919982|ref|ZP_01908457.1| two component, sigma54 specific, transcriptional regulator, Fis
family protein [Plesiocystis pacifica SIR-1]
gi|149819255|gb|EDM78689.1| two component, sigma54 specific, transcriptional regulator, Fis
family protein [Plesiocystis pacifica SIR-1]
Length = 513
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 71/126 (56%), Gaps = 3/126 (2%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLREN-RNNFDLVISDVHMPDMD 83
RVL VDD+P KVL L YEV +AL ++ R FD+VISD+ MP+MD
Sbjct: 7 RVLVVDDEPNLRKVLGALLMQLGYEVLTEPDGASALARVKSAPRGTFDVVISDLRMPNMD 66
Query: 84 GFKLLEHVGLE-MDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIR- 141
G LLE + E LPVI+L+A+G ++ + GA D+L KP +++ ++ ++
Sbjct: 67 GMALLEALTAEDSSLPVIILTAHGTVDTAVQAVKKGAFDFLEKPFERDQIDHLVSKAVKT 126
Query: 142 RKKVGP 147
R+ GP
Sbjct: 127 RRLAGP 132
>gi|456359250|dbj|BAM93454.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359252|dbj|BAM93455.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359254|dbj|BAM93456.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359256|dbj|BAM93457.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359258|dbj|BAM93458.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
Length = 331
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPD-M 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 36 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 95
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 96 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 155
Query: 140 IRR 142
RR
Sbjct: 156 WRR 158
>gi|379025576|dbj|BAL63565.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025578|dbj|BAL63566.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025580|dbj|BAL63567.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025582|dbj|BAL63568.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359194|dbj|BAM93426.1| pseudo-response regulator [Triticum ispahanicum]
gi|456359196|dbj|BAM93427.1| pseudo-response regulator [Triticum ispahanicum]
gi|456359220|dbj|BAM93439.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359222|dbj|BAM93440.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 668
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPD-M 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV++++ M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEMFMHGGL 97
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 140 IRR 142
RR
Sbjct: 158 WRR 160
>gi|51891888|ref|YP_074579.1| two-component response regulator [Symbiobacterium thermophilum IAM
14863]
gi|51855577|dbj|BAD39735.1| two-component response regulator, probably involved in phosphate
sensing [Symbiobacterium thermophilum IAM 14863]
Length = 235
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 78/137 (56%), Gaps = 4/137 (2%)
Query: 20 FPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM 79
FP+ R+L VDD+P+ L+++ LR +EV + L++ RE DLVI DV +
Sbjct: 2 FPVPERILVVDDEPSILELVAYNLRRAGFEVLTADNGEDGLRIAREE--EIDLVILDVML 59
Query: 80 PDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
P +DGF++L + +LPV+ML+A G+ + G GA DY+ KP EL + +
Sbjct: 60 PGIDGFEVLRALRRHSELPVLMLTARGEEIDRVVGFEIGADDYVTKPFSPRELTGRVKAI 119
Query: 140 IRRKK--VGPKDQNKLL 154
+RR + P+DQ+ L+
Sbjct: 120 LRRARRSAEPQDQDTLV 136
>gi|295913655|gb|ADG58070.1| transcription factor [Lycoris longituba]
Length = 151
Score = 85.5 bits (210), Expect = 9e-14, Method: Composition-based stats.
Identities = 39/89 (43%), Positives = 63/89 (70%)
Query: 184 RKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKIL 243
R+ + E D++ E S+ ++ R+VWTP+LH++F+ + +LG +AVPKKI+
Sbjct: 61 RRPPAEKPPETSCNDEEVLEGSCSSRNQRRRLVWTPQLHKRFLDVMARLGSKEAVPKKIM 120
Query: 244 DLMNVEGLTRENVASHLQKFRLYLKRLSN 272
++MNVEGLTRE+VASHLQK+++ K +S+
Sbjct: 121 EMMNVEGLTREHVASHLQKYQMKFKEISS 149
>gi|242062346|ref|XP_002452462.1| hypothetical protein SORBIDRAFT_04g026190 [Sorghum bicolor]
gi|241932293|gb|EES05438.1| hypothetical protein SORBIDRAFT_04g026190 [Sorghum bicolor]
Length = 524
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 69/125 (55%), Gaps = 3/125 (2%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+R+L D D T + + L C Y VT + +L D+++++V +P
Sbjct: 34 VRILLCDGDATSSREVLRLLCNCSYHVTCAKSPRQVINILNYEGGEIDIILAEVDLPVSK 93
Query: 84 GFKLLEHVGLEMDL---PVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
FK+L+++ DL P+IM+S + +V+K + GA +YL+KP+R EL N+W HV
Sbjct: 94 CFKMLKYIARNKDLRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRTNELLNLWTHVW 153
Query: 141 RRKKV 145
RR+++
Sbjct: 154 RRRRM 158
>gi|159154677|gb|ABW93666.1| pseudo-response regulator [Triticum turgidum]
gi|159154679|gb|ABW93667.1| pseudo-response regulator [Triticum turgidum]
gi|159154681|gb|ABW93668.1| pseudo-response regulator [Triticum turgidum]
gi|379025480|dbj|BAL63517.1| pseudo-response regulator [Triticum turanicum]
gi|379025484|dbj|BAL63519.1| pseudo-response regulator [Triticum turanicum]
gi|379025486|dbj|BAL63520.1| pseudo-response regulator [Triticum turanicum]
gi|379025566|dbj|BAL63560.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025644|dbj|BAL63599.1| pseudo-response regulator [Triticum durum]
gi|379025646|dbj|BAL63600.1| pseudo-response regulator [Triticum durum]
gi|379025648|dbj|BAL63601.1| pseudo-response regulator [Triticum durum]
gi|379025650|dbj|BAL63602.1| pseudo-response regulator [Triticum durum]
gi|379025652|dbj|BAL63603.1| pseudo-response regulator [Triticum durum]
gi|379025654|dbj|BAL63604.1| pseudo-response regulator [Triticum durum]
gi|379025656|dbj|BAL63605.1| pseudo-response regulator [Triticum durum]
gi|379025658|dbj|BAL63606.1| pseudo-response regulator [Triticum durum]
gi|379025660|dbj|BAL63607.1| pseudo-response regulator [Triticum durum]
gi|379025662|dbj|BAL63608.1| pseudo-response regulator [Triticum durum]
gi|379025664|dbj|BAL63609.1| pseudo-response regulator [Triticum durum]
gi|379025666|dbj|BAL63610.1| pseudo-response regulator [Triticum durum]
gi|379025668|dbj|BAL63611.1| pseudo-response regulator [Triticum durum]
gi|379025670|dbj|BAL63612.1| pseudo-response regulator [Triticum durum]
gi|379025672|dbj|BAL63613.1| pseudo-response regulator [Triticum durum]
gi|379025674|dbj|BAL63614.1| pseudo-response regulator [Triticum durum]
gi|379025676|dbj|BAL63615.1| pseudo-response regulator [Triticum durum]
gi|379025678|dbj|BAL63616.1| pseudo-response regulator [Triticum durum]
gi|379025680|dbj|BAL63617.1| pseudo-response regulator [Triticum durum]
gi|379025684|dbj|BAL63619.1| pseudo-response regulator [Triticum durum]
gi|379025686|dbj|BAL63620.1| pseudo-response regulator [Triticum durum]
gi|379025688|dbj|BAL63621.1| pseudo-response regulator [Triticum durum]
gi|379025690|dbj|BAL63622.1| pseudo-response regulator [Triticum durum]
gi|379025692|dbj|BAL63623.1| pseudo-response regulator [Triticum durum]
gi|379025694|dbj|BAL63624.1| pseudo-response regulator [Triticum durum]
gi|379025696|dbj|BAL63625.1| pseudo-response regulator [Triticum durum]
gi|379026082|dbj|BAL63818.1| pseudo-response regulator [Triticum durum]
Length = 668
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPD-M 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 97
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA ++L KP+R ELKN+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAAEFLAKPIRKNELKNLWAHV 157
Query: 140 IRR 142
RR
Sbjct: 158 WRR 160
>gi|379025846|dbj|BAL63700.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025848|dbj|BAL63701.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 664
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPD-M 82
+RVL V+ D + +V+ LR C Y+ A L++ ++N DLV+++V M +
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQFIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 94
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 95 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 154
Query: 140 IRR 142
RR
Sbjct: 155 WRR 157
>gi|297800266|ref|XP_002868017.1| pseudo-response regulator 2 [Arabidopsis lyrata subsp. lyrata]
gi|297313853|gb|EFH44276.1| pseudo-response regulator 2 [Arabidopsis lyrata subsp. lyrata]
Length = 533
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/65 (63%), Positives = 51/65 (78%), Gaps = 2/65 (3%)
Query: 206 DSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRL 265
+ T++KK V WTPELH+KFV AV QLGVD+A+P +IL+LM V LTR NVASHLQKFR
Sbjct: 290 NKTSRKK--VDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVGTLTRHNVASHLQKFRQ 347
Query: 266 YLKRL 270
+ K +
Sbjct: 348 HRKNI 352
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 68/132 (51%), Gaps = 9/132 (6%)
Query: 18 DKFPIGMRVLAV------DDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFD 71
+ FP G++VL + D D + + L + Y VT AL + +NR +F
Sbjct: 12 ENFPKGLKVLLLLHGGDSDRDGSSAAETRSKLESMDYIVTTFTDETEALSAVVKNRESFH 71
Query: 72 LVISDVHM-PDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIE 130
+ I +V+ + + FK LE G + LP IM+S MK I GA ++L KP+ E
Sbjct: 72 VAIVEVNTRAENESFKFLE--GAKDVLPTIMISTDHCITTTMKCIALGAVEFLQKPLSPE 129
Query: 131 ELKNIWQHVIRR 142
+LKNIWQHV+ +
Sbjct: 130 KLKNIWQHVVHK 141
>gi|311029188|ref|ZP_07707278.1| two component transcriptional regulator, winged helix family
protein [Bacillus sp. m3-13]
Length = 228
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 74/143 (51%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
MRVL V+DD T LE LR YE + +A + E N DL + D+ +PD
Sbjct: 1 MRVLIVEDDRTIAVGLEYSLRQEGYETILCPDVRSAESAIGEKLNEIDLCLFDLSLPDGS 60
Query: 84 GFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRK 143
G+ L E V D PVI L+A+ D V+ G+ GA DY+ KP R+ EL + + V+RR
Sbjct: 61 GYDLCEQVKKREDKPVIFLTAFDDEVNVVMGLDMGADDYITKPFRVRELLSRIKSVLRRY 120
Query: 144 KVGPKDQNKLLNQENSRVGAGEG 166
P+ ++ EN R+ EG
Sbjct: 121 HKQPEQVKSYIDIENIRINTLEG 143
>gi|452820793|gb|EME27831.1| myb family transcription factor [Galdieria sulphuraria]
Length = 552
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/64 (60%), Positives = 49/64 (76%)
Query: 206 DSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRL 265
D + K R++WTPELH +F+ AVN +GV+ AVPK IL LMNVEGLT E+V SHLQK+R
Sbjct: 318 DGSKTLKKRLIWTPELHDRFLKAVNAVGVNNAVPKTILYLMNVEGLTSEHVKSHLQKYRN 377
Query: 266 YLKR 269
LK+
Sbjct: 378 NLKK 381
>gi|320449473|ref|YP_004201569.1| alkaline phosphatase synthesis transcriptional regulatory protein
PhoP [Thermus scotoductus SA-01]
gi|320149642|gb|ADW21020.1| alkaline phosphatase synthesis transcriptional regulatory protein
PhoP [Thermus scotoductus SA-01]
Length = 225
Score = 84.7 bits (208), Expect = 1e-13, Method: Composition-based stats.
Identities = 48/120 (40%), Positives = 73/120 (60%), Gaps = 5/120 (4%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
MRVL VDDDP L+VL +LR +EV AL++ DL+I D+ +P +D
Sbjct: 1 MRVLLVDDDPALLEVLGAYLRGAGFEVLEAKDGEKALELFPRA----DLIILDLMLPKLD 56
Query: 84 GFKLLEHVGLEM-DLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRR 142
GFK+LE V E +LP++ML+A G+ + +KG+ GA DY++KP +E+ + ++RR
Sbjct: 57 GFKVLEEVRRERPELPILMLTARGEEEERVKGLELGADDYVVKPFSPKEVVARVKALLRR 116
>gi|408492641|ref|YP_006869010.1| two-component system nitrogen sensor response regulator NR(I)
[Psychroflexus torquis ATCC 700755]
gi|408469916|gb|AFU70260.1| two-component system nitrogen sensor response regulator NR(I)
[Psychroflexus torquis ATCC 700755]
Length = 455
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 71/116 (61%), Gaps = 2/116 (1%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
++L +DDDP K L N+LR Y + ++ + AL++L+ FDLVI+D +P M+G
Sbjct: 3 KILIIDDDPFFNKTLSNYLRRFDYSIETSSSSEEALEILK--TETFDLVITDYRLPKMNG 60
Query: 85 FKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
+L+E + ++PVI+++ Y D K +K I GA +++ KPV EE K + ++ +
Sbjct: 61 LELIEKIKTHWNIPVILITNYSDIKTAVKSIKLGAFEFVSKPVIPEEFKLVIENAL 116
>gi|302390526|ref|YP_003826347.1| two component transcriptional regulator, winged helix family
[Thermosediminibacter oceani DSM 16646]
gi|302201154|gb|ADL08724.1| two component transcriptional regulator, winged helix family
[Thermosediminibacter oceani DSM 16646]
Length = 229
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 70/122 (57%), Gaps = 2/122 (1%)
Query: 23 GMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDM 82
G R+L VDD+ L +++NFL + VT + V ALK+L + FDLV+ D+ MP++
Sbjct: 3 GYRILVVDDEDKLLDLIKNFLEKEGFAVTCADSGVEALKLL--EKRKFDLVVLDIMMPEV 60
Query: 83 DGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRR 142
GF +L + ++ +PVI L+A + + G+ G DY+ KP + EL + V+RR
Sbjct: 61 SGFDVLRRIREKIQIPVIFLTARAEEPDKLLGLELGGDDYITKPFSLRELAARIRAVLRR 120
Query: 143 KK 144
K
Sbjct: 121 AK 122
>gi|13940498|gb|AAK50393.1|AF318581_1 putative transcription factor OsGLK1 [Oryza sativa Indica Group]
Length = 455
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 46/56 (82%)
Query: 215 VVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKRL 270
V WTPELHR+FV AV QLG+DKAVP +IL++M ++ LTR N+ASHLQK+R + K +
Sbjct: 183 VDWTPELHRRFVQAVEQLGIDKAVPSRILEIMGIDSLTRHNIASHLQKYRSHRKHM 238
>gi|42565471|gb|AAS21003.1| cytokinin response regulator 1 protein [Hyacinthus orientalis]
Length = 254
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 57/92 (61%), Gaps = 9/92 (9%)
Query: 177 DQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDK 236
DQ +S +R + + ED ++ + + K+PR+VWTP+LH + + V LG+
Sbjct: 114 DQKDESRVRRSEAENSED---------DQSARSLKRPRLVWTPQLHTRLLTWVAHLGIKT 164
Query: 237 AVPKKILDLMNVEGLTRENVASHLQKFRLYLK 268
AVPK I+ L GLTRENVASHLQK+RLY +
Sbjct: 165 AVPKTIMQLRMSRGLTRENVASHLQKYRLYFE 196
>gi|75321927|sp|Q5Z5I4.1|GLK1_ORYSJ RecName: Full=Probable transcription factor GLK1; AltName:
Full=Golden2-like protein 1; Short=OsGLK1
gi|54291302|dbj|BAD62070.1| putative golden2-like transcription factor [Oryza sativa Japonica
Group]
gi|215694412|dbj|BAG89405.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215704371|dbj|BAG93805.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 455
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 46/56 (82%)
Query: 215 VVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKRL 270
V WTPELHR+FV AV QLG+DKAVP +IL++M ++ LTR N+ASHLQK+R + K +
Sbjct: 183 VDWTPELHRRFVQAVEQLGIDKAVPSRILEIMGIDSLTRHNIASHLQKYRSHRKHM 238
>gi|125555252|gb|EAZ00858.1| hypothetical protein OsI_22886 [Oryza sativa Indica Group]
Length = 448
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 46/56 (82%)
Query: 215 VVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKRL 270
V WTPELHR+FV AV QLG+DKAVP +IL++M ++ LTR N+ASHLQK+R + K +
Sbjct: 176 VDWTPELHRRFVQAVEQLGIDKAVPSRILEIMGIDSLTRHNIASHLQKYRSHRKHM 231
>gi|125597151|gb|EAZ36931.1| hypothetical protein OsJ_21268 [Oryza sativa Japonica Group]
Length = 448
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 46/56 (82%)
Query: 215 VVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKRL 270
V WTPELHR+FV AV QLG+DKAVP +IL++M ++ LTR N+ASHLQK+R + K +
Sbjct: 176 VDWTPELHRRFVQAVEQLGIDKAVPSRILEIMGIDSLTRHNIASHLQKYRSHRKHM 231
>gi|125525102|gb|EAY73216.1| hypothetical protein OsI_01087 [Oryza sativa Indica Group]
Length = 384
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/62 (59%), Positives = 49/62 (79%)
Query: 205 EDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFR 264
++S ++K +V WTPELHR+FV AV QLG+DKAVP +IL+LM +E LTR N+ASHLQ R
Sbjct: 206 KNSHGKRKVKVDWTPELHRRFVQAVEQLGIDKAVPSRILELMGIECLTRHNIASHLQAAR 265
Query: 265 LY 266
+
Sbjct: 266 KW 267
>gi|357632197|ref|ZP_09130075.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Desulfovibrio sp. FW1012B]
gi|357580751|gb|EHJ46084.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Desulfovibrio sp. FW1012B]
Length = 453
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Query: 26 VLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDGF 85
+LAVDDDP L+VLE L + Y+V AL++L + LVISD+ MP MDG
Sbjct: 11 ILAVDDDPHILEVLEVRLVSAGYDVVTAGDGAEALEVL--AKRPVKLVISDIRMPGMDGM 68
Query: 86 KLLEHVGLE-MDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEEL 132
+LLE + + LP+I L+A+G ++ I HGA DYL KP +EL
Sbjct: 69 RLLEEMERRGIRLPIIFLTAHGSIPGAVEAIKHGAVDYLTKPFDGQEL 116
>gi|386393158|ref|ZP_10077939.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Desulfovibrio sp. U5L]
gi|385734036|gb|EIG54234.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Desulfovibrio sp. U5L]
Length = 453
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Query: 26 VLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDGF 85
+LAVDDDP L+VLE L + Y+V AL++L + LVISD+ MP MDG
Sbjct: 11 ILAVDDDPHILEVLEVRLVSAGYDVVTAGDGAEALEVL--AKRPVKLVISDIRMPGMDGM 68
Query: 86 KLLEHVGLE-MDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEEL 132
+LLE + + LP+I L+A+G ++ I HGA DYL KP +EL
Sbjct: 69 RLLEEMERRGIRLPIIFLTAHGSIPGAVEAIKHGAVDYLTKPFDGQEL 116
>gi|323702183|ref|ZP_08113850.1| two component transcriptional regulator, winged helix family
[Desulfotomaculum nigrificans DSM 574]
gi|333924413|ref|YP_004497993.1| winged helix family two component transcriptional regulator
[Desulfotomaculum carboxydivorans CO-1-SRB]
gi|323532870|gb|EGB22742.1| two component transcriptional regulator, winged helix family
[Desulfotomaculum nigrificans DSM 574]
gi|333749974|gb|AEF95081.1| two component transcriptional regulator, winged helix family
[Desulfotomaculum carboxydivorans CO-1-SRB]
Length = 224
Score = 84.3 bits (207), Expect = 2e-13, Method: Composition-based stats.
Identities = 46/122 (37%), Positives = 72/122 (59%), Gaps = 2/122 (1%)
Query: 22 IGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPD 81
+G R+L +DDDP +L+ L Y V V N T LKM ++N +L+I D+ MP
Sbjct: 1 MGARILVIDDDPKITAMLQRVLTYEGYRVEVANDGYTGLKMAQKNPP--ELLILDIMMPG 58
Query: 82 MDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIR 141
+DG+++ E +P+++LSA + + +KG+ GA DYL+KP +EEL Q ++R
Sbjct: 59 LDGWEICRRFRRENFIPILILSARDEVESRVKGLNLGADDYLVKPFALEELLARVQALLR 118
Query: 142 RK 143
RK
Sbjct: 119 RK 120
>gi|125569682|gb|EAZ11197.1| hypothetical protein OsJ_01047 [Oryza sativa Japonica Group]
Length = 386
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/62 (59%), Positives = 49/62 (79%)
Query: 205 EDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFR 264
++S ++K +V WTPELHR+FV AV QLG+DKAVP +IL+LM +E LTR N+ASHLQ R
Sbjct: 208 KNSHGKRKVKVDWTPELHRRFVQAVEQLGIDKAVPSRILELMGIECLTRHNIASHLQAAR 267
Query: 265 LY 266
+
Sbjct: 268 KW 269
>gi|302342658|ref|YP_003807187.1| response regulator receiver protein [Desulfarculus baarsii DSM
2075]
gi|301639271|gb|ADK84593.1| response regulator receiver protein [Desulfarculus baarsii DSM
2075]
Length = 288
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 74/126 (58%), Gaps = 4/126 (3%)
Query: 12 CEDGDIDKFPI-GMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNF 70
C+ + +K P+ R+L DD+ ++L+ FL ++V + ALK+ RE F
Sbjct: 3 CDKPNDEKLPVRPSRILVADDEDALRELLKRFLETKGHQVVLAQDGREALKLFREQ--PF 60
Query: 71 DLVISDVHMPDMDGFKLLEHVG-LEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRI 129
DLV+SDV MP +DG +LL V + PV+++S YGD + V+ + GA ++L KP+RI
Sbjct: 61 DLVLSDVRMPGLDGLQLLAAVKDINPRTPVVLISGYGDIETVVTALKAGAENFLAKPIRI 120
Query: 130 EELKNI 135
+ L+ +
Sbjct: 121 DMLRRV 126
>gi|168017449|ref|XP_001761260.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687600|gb|EDQ73982.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 182
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/109 (45%), Positives = 67/109 (61%), Gaps = 14/109 (12%)
Query: 209 TQKKPRVVWTPELHRKFVGAVNQLG-VDKAVPKKILDLMNVEGLTRENVASHLQKFRL-- 265
T KPR+ WTPELH +FV AVNQLG DKA PK ++ +M V+GLT ++ SHLQKFRL
Sbjct: 1 TDPKPRLRWTPELHERFVDAVNQLGGADKATPKSVMRVMGVKGLTLYHLKSHLQKFRLGK 60
Query: 266 YLKRLSNETPQAGMVAALGSKDSSYLRIGALDGFGDLRSLNSPGRLSSS 314
L+R S+E +KD++Y+ G L G LR +S + S +
Sbjct: 61 QLQRDSHE----------ANKDATYV-CGILTGSSHLRGTSSDSKFSPA 98
>gi|308913672|gb|ADO51646.1| TOC1b [Zea mays]
Length = 488
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 69/125 (55%), Gaps = 3/125 (2%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+R+L D D + + + L C Y VT + +L D+++++V +P
Sbjct: 28 VRILLCDGDASSSREVLRLLCNCSYHVTCAKSPRQVINILNYEGGEIDIILAEVDLPVSK 87
Query: 84 GFKLLEHVGLEMDL---PVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
FK+L+++ DL P+IM+S + +V+K + GA +YL+KP+R EL N+W HV
Sbjct: 88 CFKMLKYIARNKDLRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRTNELLNLWTHVW 147
Query: 141 RRKKV 145
RR+++
Sbjct: 148 RRRRM 152
>gi|118638618|gb|ABL09465.1| pseudo-response regulator [Triticum aestivum]
gi|379025584|dbj|BAL63569.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025586|dbj|BAL63570.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025588|dbj|BAL63571.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025590|dbj|BAL63572.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025592|dbj|BAL63573.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025594|dbj|BAL63574.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025596|dbj|BAL63575.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025598|dbj|BAL63576.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025600|dbj|BAL63577.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025602|dbj|BAL63578.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025604|dbj|BAL63579.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025606|dbj|BAL63580.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025608|dbj|BAL63581.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025610|dbj|BAL63582.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025612|dbj|BAL63583.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025614|dbj|BAL63584.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025616|dbj|BAL63585.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025618|dbj|BAL63586.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025620|dbj|BAL63587.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025632|dbj|BAL63593.1| pseudo-response regulator [Triticum durum]
gi|379025634|dbj|BAL63594.1| pseudo-response regulator [Triticum durum]
gi|379025636|dbj|BAL63595.1| pseudo-response regulator [Triticum durum]
gi|379025640|dbj|BAL63597.1| pseudo-response regulator [Triticum durum]
gi|456359214|dbj|BAM93436.1| pseudo-response regulator [Triticum turgidum subsp. paleocolchicum]
gi|456359216|dbj|BAM93437.1| pseudo-response regulator [Triticum turgidum subsp. paleocolchicum]
Length = 266
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPD-M 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 97
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 140 IRR 142
RR
Sbjct: 158 WRR 160
>gi|297605773|ref|NP_001057583.2| Os06g0348800 [Oryza sativa Japonica Group]
gi|54291303|dbj|BAD62071.1| putative golden2-like transcription factor [Oryza sativa Japonica
Group]
gi|255677022|dbj|BAF19497.2| Os06g0348800 [Oryza sativa Japonica Group]
Length = 422
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 46/56 (82%)
Query: 215 VVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKRL 270
V WTPELHR+FV AV QLG+DKAVP +IL++M ++ LTR N+ASHLQK+R + K +
Sbjct: 150 VDWTPELHRRFVQAVEQLGIDKAVPSRILEIMGIDSLTRHNIASHLQKYRSHRKHM 205
>gi|229828178|ref|ZP_04454247.1| hypothetical protein GCWU000342_00235 [Shuttleworthia satelles DSM
14600]
gi|229792772|gb|EEP28886.1| hypothetical protein GCWU000342_00235 [Shuttleworthia satelles DSM
14600]
Length = 250
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 81/146 (55%), Gaps = 7/146 (4%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+ VL V+DDP +K LE+FLR + +VT AL+ L+E +DLV+ D+ +PD
Sbjct: 21 IHVLIVEDDPAIVKSLEDFLRGQEMQVTSAGGQEEALQKLQER--PYDLVLLDITLPDGS 78
Query: 84 GFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEEL----KNIWQHV 139
G+ + V + PVI L+A GD V+ G GA DY+ KP R EL +N+ +H
Sbjct: 79 GYSVCNAVKRDYQTPVIFLTASGDENSVVTGFDLGAEDYIAKPFRPRELVSRIRNVLRHT 138
Query: 140 IRRKKVGPKDQNKLLNQENSRVGAGE 165
R+ + + Q+ ++ ++ RV GE
Sbjct: 139 KRQSNI-ERVQDLRVDLDSGRVFKGE 163
>gi|452972816|gb|EME72643.1| two-component response regulator [Bacillus sonorensis L12]
Length = 222
Score = 84.3 bits (207), Expect = 2e-13, Method: Composition-based stats.
Identities = 51/144 (35%), Positives = 85/144 (59%), Gaps = 10/144 (6%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
++LAVDDD L+++ L ++EVT T Q++ + + E N ++L++ DV MPD DG
Sbjct: 3 KILAVDDDAAILRLVRKMLSIKKHEVT-TLQSIKDITI--EELNKYNLILLDVMMPDEDG 59
Query: 85 FKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELK-NIWQHVIR-- 141
FK+ E + +D+P+I ++A D ++KG++ G DY++KP I E+ I H+ R
Sbjct: 60 FKICEKIRSLIDIPIIFMTAKSDESSIIKGLSIGGDDYIVKPFSIHEVNARIEAHLRREA 119
Query: 142 RKKVGPK----DQNKLLNQENSRV 161
R K G K D + L++ E +V
Sbjct: 120 RPKKGTKSVFIDGDILIDLEAKKV 143
>gi|239616521|ref|YP_002939843.1| response regulator receiver modulated metal dependent
phosphohydrolase [Kosmotoga olearia TBF 19.5.1]
gi|239505352|gb|ACR78839.1| response regulator receiver modulated metal dependent
phosphohydrolase [Kosmotoga olearia TBF 19.5.1]
Length = 397
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 83/140 (59%), Gaps = 6/140 (4%)
Query: 22 IGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPD 81
I M++LAVDD+ + +LE ++ YEV + V AL+ L E +FD+VISD+ MP+
Sbjct: 30 INMKILAVDDNKENIYMLETLFKSYGYEVESSQNGVEALEKLAEQ--DFDVVISDILMPE 87
Query: 82 MDGFKLLEHVGLE---MDLPVIMLS-AYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQ 137
MDGF+L V ++ ++P I+ + AY D + ++ G +++KP+ + I +
Sbjct: 88 MDGFQLCRRVKMDDRLKEIPFILYTAAYTDPEDRKFALSLGVDRFIIKPLEPDAFVKIVR 147
Query: 138 HVIRRKKVGPKDQNKLLNQE 157
VI+ KV P + NK++N+E
Sbjct: 148 EVIQNHKVKPLNNNKVVNKE 167
>gi|327533492|gb|AEA92684.1| TOC1 [Phaseolus vulgaris]
Length = 561
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 81/144 (56%), Gaps = 6/144 (4%)
Query: 14 DGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLV 73
DG ID+ + R+L D+D + + L C Y+VT+ + L + ++
Sbjct: 23 DGFIDRSKV--RILLCDNDSNSSQEVFTLLLGCSYQVTLVKSPRQVIDALNAEGQHIGII 80
Query: 74 ISDVHMPDMDGFKLLEHVGLEMD---LPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIE 130
++++ +P G K+L+++ + + +PVIM+SA + +V+K + GA DYL+KP+R
Sbjct: 81 LAELDLPTKKGMKMLKYIARDKEFRRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTN 140
Query: 131 ELKNIWQHVI-RRKKVGPKDQNKL 153
EL N+W H+ RR+ +G ++N L
Sbjct: 141 ELLNLWMHMWGRRRMLGLVEKNIL 164
>gi|219849054|ref|YP_002463487.1| winged helix family two component transcriptional regulator
[Chloroflexus aggregans DSM 9485]
gi|219543313|gb|ACL25051.1| two component transcriptional regulator, winged helix family
[Chloroflexus aggregans DSM 9485]
Length = 247
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 72/126 (57%), Gaps = 2/126 (1%)
Query: 17 IDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISD 76
+D+ P R+L DDDP+ ++++ L A QYE V + AL+ +R FDLV D
Sbjct: 14 VDQPPPKRRILVADDDPSIGRLIQTALPAQQYETVVVANGMEALEAF--DRGQFDLVFLD 71
Query: 77 VHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIW 136
V MP +DGF E + + D+P+++++A T +++G GA +Y+ KP R+ E
Sbjct: 72 VMMPFVDGFDACERIRAKSDVPIVIITARDGTDDIVQGFRRGADEYITKPFRVAEFVARV 131
Query: 137 QHVIRR 142
+ ++RR
Sbjct: 132 EAILRR 137
>gi|386812842|ref|ZP_10100067.1| two-component response regulator [planctomycete KSU-1]
gi|386405112|dbj|GAB62948.1| two-component response regulator [planctomycete KSU-1]
Length = 464
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 70/120 (58%), Gaps = 3/120 (2%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
++L V+DD L + L YEV + AL + R R ++DLVI+D+ MP MDG
Sbjct: 6 KILVVEDDEYVLGSIRILLNKEGYEVNTALNGLEALNLYR--RESYDLVIADLKMPQMDG 63
Query: 85 FKLLEHVGLEM-DLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRK 143
+LL+ + LE D+ +IM++AYG + ++ + GA DY+ KPV EE++ + Q R+
Sbjct: 64 IELLKQLKLEFSDVSLIMMTAYGSIRTAVEAMKMGAYDYVTKPVSAEEIRLVIQRAFERQ 123
>gi|297840627|ref|XP_002888195.1| hypothetical protein ARALYDRAFT_893617 [Arabidopsis lyrata subsp.
lyrata]
gi|297334036|gb|EFH64454.1| hypothetical protein ARALYDRAFT_893617 [Arabidopsis lyrata subsp.
lyrata]
Length = 117
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 55/77 (71%), Gaps = 2/77 (2%)
Query: 205 EDSTTQKKPRVVWTPELHRKFVGAVNQLG-VDKAVPKKILDLMNVEGLTRENVASHLQKF 263
E T + R VW+ ELH+KF+ A++QLG DKA+PKKIL MNVEGLTR NVA+HLQK+
Sbjct: 15 ESRTRKNHGRFVWSHELHQKFLNAIDQLGGNDKAIPKKILADMNVEGLTRLNVATHLQKY 74
Query: 264 RLYLKRLSNETPQAGMV 280
RL L+R + E Q M
Sbjct: 75 RLTLER-TTEAQQLNMA 90
>gi|397904466|ref|ZP_10505377.1| Response regulator (CheY-like receiver domain and HTH-type
DNA-binding domain) [Caloramator australicus RC3]
gi|397162476|emb|CCJ32711.1| Response regulator (CheY-like receiver domain and HTH-type
DNA-binding domain) [Caloramator australicus RC3]
Length = 225
Score = 84.0 bits (206), Expect = 3e-13, Method: Composition-based stats.
Identities = 50/134 (37%), Positives = 78/134 (58%), Gaps = 4/134 (2%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
R+L VDDD +LE +L Y+V N V ALK+ +E + DL++ DV MP +DG
Sbjct: 4 RILIVDDDVNICDLLEIYLEKEGYKVYKANSGVDALKIFKERQ--LDLIVLDVMMPGLDG 61
Query: 85 FKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKK 144
++ L+ + +PV+ML+A G+T + G+ GA DY++KP +EL + V+RR K
Sbjct: 62 YETLKEIRKTSAIPVVMLTAKGETFDRVLGLELGADDYIVKPFEPKELVARIRAVLRRYK 121
Query: 145 VGPKDQNKLLNQEN 158
P+ Q K L ++
Sbjct: 122 --PQVQKKSLEYKD 133
>gi|381149249|gb|AFF60407.1| golden 2-like 1 transcription factor [Solanum phureja]
Length = 460
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/62 (61%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Query: 210 QKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHL-QKFRLYLK 268
++K +V WTPELHR+FV AV QLGVDKAVP +IL++M ++ LTR N+ASHL QK+R + K
Sbjct: 171 KRKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILEIMGIDCLTRHNIASHLQQKYRSHRK 230
Query: 269 RL 270
L
Sbjct: 231 HL 232
>gi|317130175|ref|YP_004096457.1| winged helix family two component transcriptional regulator
[Bacillus cellulosilyticus DSM 2522]
gi|315475123|gb|ADU31726.1| two component transcriptional regulator, winged helix family
[Bacillus cellulosilyticus DSM 2522]
Length = 230
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 77/122 (63%), Gaps = 4/122 (3%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
++L VDD+ K+L+ A +++ + A L+ NN+DL+I D+ MP++DG
Sbjct: 4 KILLVDDEQEMRKLLKVCFSASPFQLDEASNGDEAF--LKVQENNYDLIILDIMMPEIDG 61
Query: 85 FKLLEHVGLEMD--LPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRR 142
F+LL + +E+D +PVI+L+A GDT+ V++G+ GA DY++KP +EL + V+RR
Sbjct: 62 FELLNMLRVELDTEIPVILLTALGDTERVVEGLKRGADDYVVKPFEPKELVARVESVLRR 121
Query: 143 KK 144
K
Sbjct: 122 SK 123
>gi|357482309|ref|XP_003611440.1| Two-component response regulator-like protein [Medicago truncatula]
gi|355512775|gb|AES94398.1| Two-component response regulator-like protein [Medicago truncatula]
Length = 548
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 54/71 (76%), Gaps = 5/71 (7%)
Query: 205 EDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHL---- 260
E+ +KK +V WT ELH+KFV AV QLG+D+A+P +IL+LM V+GLTR NVASHL
Sbjct: 304 ENKANRKKMKVDWTAELHKKFVKAVEQLGIDQAIPSRILELMKVDGLTRHNVASHLQIFV 363
Query: 261 -QKFRLYLKRL 270
QK+R++ +++
Sbjct: 364 EQKYRMHKRQI 374
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 64/125 (51%), Gaps = 6/125 (4%)
Query: 20 FPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM 79
FP G+RVL ++ D + L + Y V+ AL + + F + I +V +
Sbjct: 14 FPKGLRVLLLEGDNNSASEIRTKLESMDYNVSTFYNENEALSAISSSPKCFHVAIVEVSI 73
Query: 80 --PDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQ 137
PD GFK LE+ DLP IM S +MK I GA ++L KP+ ++LKNIWQ
Sbjct: 74 SCPD-GGFKFLENAK---DLPTIMTSNSQCINTMMKCIALGAVEFLTKPLSEDKLKNIWQ 129
Query: 138 HVIRR 142
HV+ +
Sbjct: 130 HVVHK 134
>gi|224097311|ref|XP_002310903.1| predicted protein [Populus trichocarpa]
gi|222853806|gb|EEE91353.1| predicted protein [Populus trichocarpa]
Length = 408
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 52/75 (69%), Gaps = 3/75 (4%)
Query: 202 HENEDSTTQKKPRVVWTPELHRKFVGAVNQL-GVDKAVPKKILDLMNVEGLTRENVASHL 260
H + S+T KPR+ WTPELH +FV AVN+L G +KA PK +L LMNV+GLT +V SHL
Sbjct: 179 HPSPGSSTAHKPRMRWTPELHERFVEAVNKLDGAEKATPKGVLKLMNVKGLTIYHVKSHL 238
Query: 261 QKFRL--YLKRLSNE 273
QK+RL YL E
Sbjct: 239 QKYRLAKYLPEKKEE 253
>gi|302343346|ref|YP_003807875.1| Fis family transcriptional regulator [Desulfarculus baarsii DSM
2075]
gi|301639959|gb|ADK85281.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Desulfarculus baarsii DSM 2075]
Length = 449
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 83/142 (58%), Gaps = 7/142 (4%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
R+L VDD+ L VLE LR Y+V + AL++ E+ DLVI+D+ MP M G
Sbjct: 3 RILVVDDEKNYLVVLEALLRGEGYDVRTADNGQAALRLADEDEP--DLVITDMKMPRMSG 60
Query: 85 FKLLEHVGLEM-DLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRK 143
+L++ + ++ DLPVI+++AYG + ++ + GA DY++KP EL + +R +
Sbjct: 61 IELIQALRVDHPDLPVIVMTAYGTVENAVEAMKLGATDYIIKPFENRELLLTTEKTLRMR 120
Query: 144 KVGPKDQNKLLNQENSRVGAGE 165
++ QN+LL +E + G GE
Sbjct: 121 RL--MTQNRLLREELA--GYGE 138
>gi|343492741|ref|ZP_08731095.1| transcriptional regulatory protein CpxR [Vibrio nigripulchritudo
ATCC 27043]
gi|342826861|gb|EGU61268.1| transcriptional regulatory protein CpxR [Vibrio nigripulchritudo
ATCC 27043]
Length = 252
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 71/120 (59%), Gaps = 2/120 (1%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
++L V+DDP L L + QYEVT AL+ L+ + +FDL+I DV +PD+DG
Sbjct: 24 KLLLVEDDPDLNSQLSALLSSQQYEVTSYESGSKALECLKTH--SFDLIILDVDLPDVDG 81
Query: 85 FKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKK 144
F+LL +V PV+ML+AYG + ++G+ GA DY+ KP EL + ++RR +
Sbjct: 82 FELLNYVREHSSTPVVMLTAYGAEEHRIRGLRFGADDYVSKPCSFTELCLRIEGILRRTQ 141
>gi|402817698|ref|ZP_10867285.1| two component transcriptional regulator, winged helix family
[Paenibacillus alvei DSM 29]
gi|402504670|gb|EJW15198.1| two component transcriptional regulator, winged helix family
[Paenibacillus alvei DSM 29]
Length = 227
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 79/143 (55%), Gaps = 1/143 (0%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
M++L V+DD T LE L+ ++ + + +A KMLRE + F L + D+ +PD
Sbjct: 1 MKILVVEDDKTIATGLEYSLQQDHFDTALCHDVASAKKMLREEIDQFALCLFDLSLPDGS 60
Query: 84 GFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRK 143
G++L + V D+PVI L+A D V+ G+ GA DY+ KP R+ EL + + V+RR
Sbjct: 61 GYELCKMVKERQDIPVIFLTAIDDEVNVVMGLDMGADDYITKPFRVRELLSRIKSVLRRY 120
Query: 144 KVGPKDQNKLLNQENSRVGAGEG 166
P + +++ N R+ EG
Sbjct: 121 H-KPSNAKTIIDIGNVRINTLEG 142
>gi|357127777|ref|XP_003565554.1| PREDICTED: probable transcription factor GLK2-like [Brachypodium
distachyon]
Length = 522
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 50/65 (76%), Gaps = 1/65 (1%)
Query: 207 STTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLM-NVEGLTRENVASHLQKFRL 265
S ++K +V WTPELHR+FV AV QLG+DKAVP +IL+LM N LTR N+ASHLQK+R
Sbjct: 206 SHGRRKVKVDWTPELHRRFVQAVEQLGIDKAVPSRILELMGNEYSLTRHNIASHLQKYRS 265
Query: 266 YLKRL 270
+ K L
Sbjct: 266 HRKHL 270
>gi|108864017|gb|ABG22374.1| CCT motif family protein, expressed [Oryza sativa Japonica Group]
Length = 620
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 80/163 (49%), Gaps = 17/163 (10%)
Query: 57 VTALKMLRENRNNFDLVISDVHMPDMDGFKLLEHVGLE---MDLPVIMLSAYGDTKLVMK 113
+ A ++RE FDLV+++V MP + G +LL + ++PVIM+S+ V++
Sbjct: 1 MKAWGVMRERAYAFDLVLTEVTMPTLSGIELLSRIVASDECKNIPVIMMSSQDSIGTVLR 60
Query: 114 GITHGACDYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMST 173
+ GA D+L+KPVR EL+N+WQHV RR + NS+ A E +
Sbjct: 61 CMQKGAVDFLVKPVRKNELRNLWQHVWRRHAM------------NSQTNASENNAASNHL 108
Query: 174 GNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVV 216
+ NG + D++ D G E E + +K P VV
Sbjct: 109 SANGGNGSKTGEHSDEESDAQSSGSK--REVEIQSAEKLPEVV 149
>gi|149921398|ref|ZP_01909851.1| sigma-54 dependent DNA-binding response regulator [Plesiocystis
pacifica SIR-1]
gi|149817718|gb|EDM77183.1| sigma-54 dependent DNA-binding response regulator [Plesiocystis
pacifica SIR-1]
Length = 477
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 84/155 (54%), Gaps = 9/155 (5%)
Query: 18 DKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNF--DLVIS 75
DK P R+L VDD+ + L LR +EV AL L +NF D+VI+
Sbjct: 4 DKTPPRARILVVDDESSARSALTELLRDENFEVQSAGDGFKALGRL----DNFTPDVVIT 59
Query: 76 DVHMPDMDGFKLLEHVGLEM-DLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKN 134
D+ MP M+G L+E V + ++PV++++A+G + ++ I GA DYL KP+ + +L
Sbjct: 60 DLKMPGMNGIALMEKVRERLPEVPVVVMTAFGTVESAVEAIQQGADDYLTKPLHLGQLLV 119
Query: 135 IWQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQG 169
+ + V+ + + KD+ K L E +R GE +G
Sbjct: 120 VVERVLGHRAL--KDEAKRLRDELARRDEGESEEG 152
>gi|320161338|ref|YP_004174562.1| OmpR family two-component response regulator [Anaerolinea
thermophila UNI-1]
gi|319995191|dbj|BAJ63962.1| OmpR family two-component response regulator [Anaerolinea
thermophila UNI-1]
Length = 239
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 76/141 (53%), Gaps = 8/141 (5%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
+VL VDDDPT L+ L++FLRA +EV N ALK+ + + DLV+ DV MP MDG
Sbjct: 4 KVLIVDDDPTLLRFLQDFLRAEAFEVLAANNGHEALKL--AYQEHPDLVVLDVMMPGMDG 61
Query: 85 FKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKK 144
+++ + D+P+I+L+A + ++G G DYL KP EL R +
Sbjct: 62 WEVCSRLHELSDIPIILLTAKTSEQDKLRGFQLGVDDYLTKPFSFAELAA------RIRA 115
Query: 145 VGPKDQNKLLNQENSRVGAGE 165
+ + Q L Q +++ GE
Sbjct: 116 ILARAQRSLPAQRKNQITFGE 136
>gi|328953201|ref|YP_004370535.1| multi-sensor signal transduction histidine kinase [Desulfobacca
acetoxidans DSM 11109]
gi|328453525|gb|AEB09354.1| multi-sensor signal transduction histidine kinase [Desulfobacca
acetoxidans DSM 11109]
Length = 698
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 68/113 (60%), Gaps = 3/113 (2%)
Query: 21 PIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMP 80
P ++L VDD+ L+++ L Y V V + + ALK L ++R +DLV+SDV MP
Sbjct: 2 PKSAKILVVDDESAVLEIIRKILVDRGYIVDVASNGLEALKFLEKSR--YDLVLSDVKMP 59
Query: 81 DMDGFKLLEHVGLEM-DLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEEL 132
++DG +LL+ +GL DL +MLSA+ + + I GA DY+ KPV E+L
Sbjct: 60 EIDGLELLQQIGLLYPDLTTVMLSAFATIRDAVAAIKLGAFDYIAKPVYPEDL 112
>gi|115484281|ref|NP_001065802.1| Os11g0157600 [Oryza sativa Japonica Group]
gi|108864015|gb|ABG22372.1| CCT motif family protein, expressed [Oryza sativa Japonica Group]
gi|108864016|gb|ABG22373.1| CCT motif family protein, expressed [Oryza sativa Japonica Group]
gi|113644506|dbj|BAF27647.1| Os11g0157600 [Oryza sativa Japonica Group]
gi|125576282|gb|EAZ17504.1| hypothetical protein OsJ_33036 [Oryza sativa Japonica Group]
gi|213959178|gb|ACJ54923.1| CCT motif family protein [Oryza sativa Japonica Group]
gi|218185285|gb|EEC67712.1| hypothetical protein OsI_35190 [Oryza sativa Indica Group]
Length = 623
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 80/163 (49%), Gaps = 17/163 (10%)
Query: 57 VTALKMLRENRNNFDLVISDVHMPDMDGFKLLEHVGLE---MDLPVIMLSAYGDTKLVMK 113
+ A ++RE FDLV+++V MP + G +LL + ++PVIM+S+ V++
Sbjct: 1 MKAWGVMRERAYAFDLVLTEVTMPTLSGIELLSRIVASDECKNIPVIMMSSQDSIGTVLR 60
Query: 114 GITHGACDYLLKPVRIEELKNIWQHVIRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMST 173
+ GA D+L+KPVR EL+N+WQHV RR + NS+ A E +
Sbjct: 61 CMQKGAVDFLVKPVRKNELRNLWQHVWRRHAM------------NSQTNASENNAASNHL 108
Query: 174 GNSDQNGKSNRKRKDQDGDEDEDGDDDGHENEDSTTQKKPRVV 216
+ NG + D++ D G E E + +K P VV
Sbjct: 109 SANGGNGSKTGEHSDEESDAQSSGSK--REVEIQSAEKLPEVV 149
>gi|379025638|dbj|BAL63596.1| pseudo-response regulator [Triticum durum]
Length = 266
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPD-M 82
+RVL V+ D + +V+ LR C Y+V A L++ ++N DLV+++V M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 97
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVIM+S++ V+ +++GA ++L KP+R ELKN+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAAEFLAKPIRKNELKNLWAHV 157
Query: 140 IRR 142
RR
Sbjct: 158 WRR 160
>gi|414591290|tpg|DAA41861.1| TPA: hypothetical protein ZEAMMB73_323779 [Zea mays]
Length = 657
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 56/88 (63%), Gaps = 3/88 (3%)
Query: 59 ALKMLRENRNNFDLVISDVHMPDMDGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGI 115
A L + NN DLV+++V MP + G LL + + ++PVIM+S+ D V K +
Sbjct: 46 AWAYLEDKGNNIDLVLTEVFMPGVSGISLLSRIMRHNIFKNIPVIMMSSSDDMSTVFKCL 105
Query: 116 THGACDYLLKPVRIEELKNIWQHVIRRK 143
+ GA D+L+KP+R ELKN+WQHV R++
Sbjct: 106 SKGAVDFLVKPIRKNELKNLWQHVWRQR 133
>gi|239906625|ref|YP_002953366.1| NtrC family two-component response regulator [Desulfovibrio
magneticus RS-1]
gi|239796491|dbj|BAH75480.1| putative NtrC family two-component response regulator
[Desulfovibrio magneticus RS-1]
Length = 460
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 65/108 (60%), Gaps = 3/108 (2%)
Query: 26 VLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDGF 85
+L VDDDP L+VLE L + Y+V + AL++L +R LVISD+ MP MDG
Sbjct: 12 ILVVDDDPHILEVLEVRLVSAGYDVVPAANGLEALEVL--SRQPVRLVISDMRMPGMDGM 69
Query: 86 KLLEHVGLE-MDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEEL 132
++LE + + LP+I L+A+G ++ I HGA DYL KP +EL
Sbjct: 70 RMLEEMERRGIKLPIIFLTAHGSIPGAVEAIKHGAVDYLTKPFDGQEL 117
>gi|189424804|ref|YP_001951981.1| response regulator receiver sensor signal transduction histidine
kinase [Geobacter lovleyi SZ]
gi|189421063|gb|ACD95461.1| response regulator receiver sensor signal transduction histidine
kinase [Geobacter lovleyi SZ]
Length = 417
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 66/112 (58%), Gaps = 1/112 (0%)
Query: 22 IGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPD 81
I +L VDD+P LK+L+ FL A Y+V AL ++ + DL+I+D+ MPD
Sbjct: 14 IKASILLVDDEPMVLKMLQTFLEAQGYQVICAPGGHEALAIIEQQGLGIDLLITDIRMPD 73
Query: 82 MDGFKLLEHVGLEMD-LPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEEL 132
M+G +LLE V + LP ++++ Y D LV++G+ A D L KP+ ++L
Sbjct: 74 MNGIRLLEAVHQFLPALPALLMTGYTDFDLVVEGLKQHAFDLLFKPIDFDQL 125
>gi|359952802|gb|AEV91191.1| MYB-related protein [Triticum aestivum]
Length = 310
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
Query: 199 DDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDK-AVPKKILDLMNVEGLTRENVA 257
D G + E + Q+K R W+PELHR+FV A+ +LG + A PK+I ++M V+GLT + V
Sbjct: 153 DAGAQREQQSAQRKARRCWSPELHRRFVAALQRLGGPQVATPKQIREMMKVDGLTNDEVK 212
Query: 258 SHLQKFRLYLKRLSN 272
SHLQK+RL+ +R S+
Sbjct: 213 SHLQKYRLHTRRASD 227
>gi|326490253|dbj|BAJ84790.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520748|dbj|BAJ92737.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 506
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/62 (62%), Positives = 49/62 (79%), Gaps = 1/62 (1%)
Query: 210 QKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLM-NVEGLTRENVASHLQKFRLYLK 268
++K +V WTPELHR+FV AV QLG+DKAVP +IL+LM N LTR N+ASHLQK+R + K
Sbjct: 200 RRKVKVDWTPELHRRFVQAVEQLGLDKAVPSRILELMGNEYRLTRHNIASHLQKYRSHRK 259
Query: 269 RL 270
L
Sbjct: 260 HL 261
>gi|343514456|ref|ZP_08751527.1| transcriptional regulatory protein CpxR [Vibrio sp. N418]
gi|342799993|gb|EGU35542.1| transcriptional regulatory protein CpxR [Vibrio sp. N418]
Length = 252
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 79/139 (56%), Gaps = 14/139 (10%)
Query: 26 VLAVDDDPTCLKVLENFLRACQYEVTVTN-----QAVTALKMLRENRNNFDLVISDVHMP 80
+L V+DD L L+A Y TVTN QA+T LKM FDL++ DV++P
Sbjct: 26 ILLVEDDRNLNHQLTALLQANGY--TVTNLECGAQALTLLKM-----RQFDLILLDVNVP 78
Query: 81 DMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
++DGF LL++V PVIML+AYG + +KG+ +GA DY+ KP EE+K + V+
Sbjct: 79 NVDGFGLLKYVRSHSRTPVIMLTAYGAEEHRIKGLRNGADDYISKPCNFEEVKLRIEAVL 138
Query: 141 RRKK--VGPKDQNKLLNQE 157
RR + P L+ QE
Sbjct: 139 RRTQQLAAPTSSRYLVYQE 157
>gi|406889094|gb|EKD35381.1| sigma-54 dependent DNA-binding response regulator (NtrC-type
regulator), partial [uncultured bacterium]
Length = 140
Score = 82.0 bits (201), Expect = 9e-13, Method: Composition-based stats.
Identities = 46/108 (42%), Positives = 67/108 (62%), Gaps = 3/108 (2%)
Query: 26 VLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDGF 85
VL VDDDP+ L+VLE L+A Y V + AL++L+ ++ D+++SD+ MP+M G
Sbjct: 7 VLIVDDDPSILEVLEARLQAAGYLVRRASSGPAALELLK--KHPIDILVSDMKMPEMSGI 64
Query: 86 KLL-EHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEEL 132
+LL E G++ LPVI L+AYG + + GA DYL KP +EL
Sbjct: 65 ELLAETYGIQPHLPVIFLTAYGTIPDAVDAVKAGAVDYLTKPFDGKEL 112
>gi|159900549|ref|YP_001546796.1| two component transcriptional regulator [Herpetosiphon aurantiacus
DSM 785]
gi|159893588|gb|ABX06668.1| two component transcriptional regulator, winged helix family
[Herpetosiphon aurantiacus DSM 785]
Length = 248
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 71/125 (56%), Gaps = 2/125 (1%)
Query: 18 DKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDV 77
D P ++L DDDP L+++E L +Y++ + + ALKM R+ + L++ DV
Sbjct: 13 DNNPHQRKILVADDDPAILRLVEVALSGQRYQLVTVSNGLEALKMYRDG--EYQLLLIDV 70
Query: 78 HMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQ 137
MP +DGF + E + D+P+I+++A T V+ G GA DY+ KP R EL+ +
Sbjct: 71 MMPYIDGFTVTERIRARSDVPIIIITARDGTDDVVHGFELGADDYITKPFRTAELQARVE 130
Query: 138 HVIRR 142
+IRR
Sbjct: 131 AIIRR 135
>gi|224090570|ref|XP_002335000.1| predicted protein [Populus trichocarpa]
gi|222832552|gb|EEE71029.1| predicted protein [Populus trichocarpa]
Length = 197
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 48/59 (81%)
Query: 203 ENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQ 261
+N ++ ++K +V WTPELHR+FV AV QLGVDKAVP +IL+LM ++ LTR N+ASHLQ
Sbjct: 129 KNNNNQGKRKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILELMGIDCLTRHNIASHLQ 187
>gi|334341693|ref|YP_004546673.1| response regulator receiver [Desulfotomaculum ruminis DSM 2154]
gi|334093047|gb|AEG61387.1| response regulator receiver [Desulfotomaculum ruminis DSM 2154]
Length = 224
Score = 82.0 bits (201), Expect = 1e-12, Method: Composition-based stats.
Identities = 44/124 (35%), Positives = 72/124 (58%), Gaps = 2/124 (1%)
Query: 22 IGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPD 81
+G R+L +DDDP +L+ L Y V V N T L+M R N +L+I D+ MP
Sbjct: 1 MGARILVIDDDPKITAMLQRALVFEGYRVDVANDGYTGLQMARNNPP--ELLILDIMMPG 58
Query: 82 MDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIR 141
+DG++ + + +P+++LSA + + +KG+ GA DYL+KP +EEL Q ++R
Sbjct: 59 LDGWEFCQRFRKDNVIPILILSAKDEVESRVKGLNLGADDYLVKPFALEELLARIQALLR 118
Query: 142 RKKV 145
R+ +
Sbjct: 119 RRAI 122
>gi|260063704|ref|YP_003196784.1| two-component system response regulator [Robiginitalea biformata
HTCC2501]
gi|88783149|gb|EAR14322.1| two-component system response regulator [Robiginitalea biformata
HTCC2501]
Length = 229
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 86/152 (56%), Gaps = 9/152 (5%)
Query: 22 IGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPD 81
+G R+L ++D+ + L+ Y V V L+ML++ +FDLVI D+ +P
Sbjct: 1 MGNRILLIEDEYAIASFVTQGLQESGYAVAVCYDGEKGLEMLQDG--DFDLVILDIVLPG 58
Query: 82 MDGFKLLEHV-GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
MDG ++ + G +DLP++ML+A G T+ V++G+ GA DYL+KP + +EL+ + +
Sbjct: 59 MDGREVARTIRGQGLDLPILMLTALGSTENVVRGLDSGADDYLVKPFKFKELEARVRALS 118
Query: 141 RRKKVGPKDQ------NKLLNQENSRVGAGEG 166
RR+ GP+ N +L+++ V GE
Sbjct: 119 RRRSSGPRGNRTLSAGNLVLDRDAKTVRRGEA 150
>gi|312281493|dbj|BAJ33612.1| unnamed protein product [Thellungiella halophila]
Length = 288
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/57 (66%), Positives = 45/57 (78%)
Query: 214 RVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKRL 270
+V WT ELHR+FV AV QLGV+KAVP +IL+LM V LTR NVASHLQK+R + K L
Sbjct: 16 KVDWTAELHRRFVEAVEQLGVEKAVPSRILELMGVHCLTRHNVASHLQKYRSHRKHL 72
>gi|255576527|ref|XP_002529155.1| DNA binding protein, putative [Ricinus communis]
gi|223531434|gb|EEF33268.1| DNA binding protein, putative [Ricinus communis]
Length = 393
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 56/88 (63%), Gaps = 6/88 (6%)
Query: 203 ENEDSTTQKKPRVVWTPELHRKFVGAVNQLG-VDKAVPKKILDLMNVEGLTRENVASHLQ 261
E++D Q+K R W+PELHR+F+ A+ QLG A PK+I +LM V+GLT + V SHLQ
Sbjct: 224 EDKDGQAQRKQRRCWSPELHRRFLHALQQLGGSHAATPKQIRELMKVDGLTNDEVKSHLQ 283
Query: 262 KFRLYLKRLS-----NETPQAGMVAALG 284
K+RL+ +R S N PQA +G
Sbjct: 284 KYRLHTRRPSPTIHNNSNPQAPQFVVVG 311
>gi|87119489|ref|ZP_01075386.1| Helix-turn-helix, Fis-type protein [Marinomonas sp. MED121]
gi|86164965|gb|EAQ66233.1| Helix-turn-helix, Fis-type protein [Marinomonas sp. MED121]
Length = 448
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 66/108 (61%), Gaps = 3/108 (2%)
Query: 26 VLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDGF 85
+L V+DD + LE+ L Y + A A+ LRE FD+V+SDV++P MDG+
Sbjct: 6 LLIVEDDKELAEALEDTLMLANYHCVLAYSAEDAVLALREQ--AFDMVVSDVNLPGMDGY 63
Query: 86 KLLEHVGLEM-DLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEEL 132
LL HV + DLP+++++A+GD ++ + GA DYLLKP + +EL
Sbjct: 64 GLLSHVIEKYPDLPIMLMTAFGDIAHAVEAMREGAVDYLLKPFQADEL 111
>gi|407474743|ref|YP_006789143.1| two-component response regulator [Clostridium acidurici 9a]
gi|407051251|gb|AFS79296.1| two-component response regulator [Clostridium acidurici 9a]
Length = 188
Score = 81.6 bits (200), Expect = 1e-12, Method: Composition-based stats.
Identities = 44/136 (32%), Positives = 82/136 (60%), Gaps = 4/136 (2%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
++L V+DD ++ FL +Y +T T+ L+ ++N+ +DLVI D+ MP+MDG
Sbjct: 4 KILVVEDDIEIAFAIKEFLAKKRYAITWTSTGKEGLEEFQKNK--YDLVIVDIMMPEMDG 61
Query: 85 FKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELK-NIWQHVIRRK 143
F L +++ ++ D+P++++SA K +KG+ GA DY+ KP + EL+ I H+ R K
Sbjct: 62 FTLCKNIRMKSDIPILIMSAKSQEKDKVKGLNIGADDYITKPFSLVELEARIDSHIRRYK 121
Query: 144 K-VGPKDQNKLLNQEN 158
+ +G + K++ ++
Sbjct: 122 RYLGENKEEKIIQYKD 137
>gi|254414953|ref|ZP_05028716.1| PAS fold family [Coleofasciculus chthonoplastes PCC 7420]
gi|196178100|gb|EDX73101.1| PAS fold family [Coleofasciculus chthonoplastes PCC 7420]
Length = 1317
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
++L +DD P LK++ +FLR +EV + LK+L + N DL++ DV MPDMDG
Sbjct: 9 QILVIDDTPENLKLVSDFLRDAGFEVRIAKSGEQGLKLL--EKLNPDLILLDVMMPDMDG 66
Query: 85 FKLLEHVGL---EMDLPVIMLSAYGDT---KLVMKGITHGACDYLLKPVRIEEL 132
F+ H+ D+PVI ++A DT + +KG++ GA DY+ KP++++E+
Sbjct: 67 FEACRHLKAWEKTKDIPVIFMTAAVDTSNCEAKVKGLSLGAVDYISKPIQLDEV 120
>gi|407773846|ref|ZP_11121146.1| two component sigma-54-specific Fis family transcriptional
regulator [Thalassospira profundimaris WP0211]
gi|407283292|gb|EKF08833.1| two component sigma-54-specific Fis family transcriptional
regulator [Thalassospira profundimaris WP0211]
Length = 456
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 20 FPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHM 79
P +R+L VDD+ + ++ L LR +VT + A +REN+ FD+++ D+ +
Sbjct: 1 MPRQIRILIVDDEESFVRSLSFALRTEGMDVTGVHSGEDAFLQVRENK--FDIILLDLRL 58
Query: 80 PDMDGFKLLEHV-GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEEL 132
P +G ++L+ + L++D+PVIM+SA+GDT+ +K + GA DYL KP ++EL
Sbjct: 59 PGANGMEVLDSIRKLDIDVPVIMISAHGDTRAAVKAVKLGAADYLSKPFELDEL 112
>gi|255568149|ref|XP_002525050.1| Two-component response regulator ARR2, putative [Ricinus communis]
gi|223535631|gb|EEF37297.1| Two-component response regulator ARR2, putative [Ricinus communis]
Length = 659
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 62/97 (63%), Gaps = 5/97 (5%)
Query: 50 VTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDGF----KLLEHVGLEMDLPVIMLSAY 105
VT + A K+L + N+ DL++S+V MP + G K++ H + ++PVIM+S++
Sbjct: 3 VTAVANGLQAWKLLEDLTNHIDLILSEVAMPCLSGIGLLCKIMNHRTCK-NIPVIMMSSH 61
Query: 106 GDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRR 142
+V K ++ GA D+L+KP+R ELKN+WQHV R+
Sbjct: 62 DSMNVVFKCLSKGALDFLVKPIRKNELKNLWQHVWRK 98
>gi|379025622|dbj|BAL63588.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025624|dbj|BAL63589.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359226|dbj|BAM93442.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 186
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 78/143 (54%), Gaps = 6/143 (4%)
Query: 4 EERMGSAGCEDGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKML 63
EE C + + + I RVL V+ D + +V+ LR C Y+V A L
Sbjct: 20 EEHAAQPRCWEEFLHRKTI--RVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL 77
Query: 64 RENRNNFDLVISDVHMPD-MDGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGA 119
++ ++N DLV+++V M + G LL + + D+PVIM+S++ V+ +++GA
Sbjct: 78 QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGA 137
Query: 120 CDYLLKPVRIEELKNIWQHVIRR 142
D+L KP+R ELKN+W HV RR
Sbjct: 138 ADFLAKPIRKNELKNLWAHVWRR 160
>gi|218781592|ref|YP_002432910.1| response regulator receiver modulated diguanylate cyclase
[Desulfatibacillum alkenivorans AK-01]
gi|218762976|gb|ACL05442.1| response regulator receiver modulated diguanylate cyclase
[Desulfatibacillum alkenivorans AK-01]
Length = 308
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 74/131 (56%), Gaps = 3/131 (2%)
Query: 26 VLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDGF 85
VL VDDD + L + Y+ A +AL++L R+ +LV++D+HMPDM+G
Sbjct: 11 VLIVDDDKPAREALYEMVLTAGYKAAAAPSAESALEIL--ARHPVELVLTDIHMPDMNGL 68
Query: 86 KLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKV 145
+L V D V++L+ + D+ + I GA D+LLKPVR+ ELK Q V R +++
Sbjct: 69 ELTAAVKERFDADVVVLTGFADSHTYEEAIGRGASDFLLKPVRLPELKARIQRVFRERRL 128
Query: 146 GPKDQNKLLNQ 156
K++ L+ Q
Sbjct: 129 W-KEREALMEQ 138
>gi|296272386|ref|YP_003655017.1| winged helix family two component transcriptional regulator
[Arcobacter nitrofigilis DSM 7299]
gi|296096560|gb|ADG92510.1| two component transcriptional regulator, winged helix family
[Arcobacter nitrofigilis DSM 7299]
Length = 221
Score = 81.3 bits (199), Expect = 1e-12, Method: Composition-based stats.
Identities = 40/140 (28%), Positives = 80/140 (57%), Gaps = 7/140 (5%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFD--LVISDVHMPDM 82
+++ ++DD C +++ FL C ++V V N +A+ N FD L++ D+++PD
Sbjct: 6 KIMLIEDDENCSFLIKVFLEECSFDVDVVNTVTSAI----SNTKFFDYSLILLDINLPDY 61
Query: 83 DGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELK-NIWQHVIR 141
+GF++L+++ ++P+I+LSAY D K+ + GA DY++KP+ +EL+ IW + +
Sbjct: 62 NGFEVLKYLNTHKNIPIIVLSAYSDKKIKLMAFKLGARDYMVKPIDPDELEARIWVQLRQ 121
Query: 142 RKKVGPKDQNKLLNQENSRV 161
+ K+ +N +
Sbjct: 122 ISNIVEIKNKKIFQIQNDTI 141
>gi|392954660|ref|ZP_10320211.1| Fis family two component sigma54 specific transcriptional regulator
[Hydrocarboniphaga effusa AP103]
gi|391857317|gb|EIT67848.1| Fis family two component sigma54 specific transcriptional regulator
[Hydrocarboniphaga effusa AP103]
Length = 457
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 80/145 (55%), Gaps = 5/145 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+R+L VDD+ +VLE L ++ A ++LRE FDLVISD+ MP ++
Sbjct: 10 LRILVVDDEANMRRVLEIMLSRRGHKTVSAGDGQAAFELLREG--GFDLVISDLRMPVVN 67
Query: 84 GFKLLEHVGLE-MDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRR 142
G +LL + + +P+IM++A G + ++ + GACDYLL+P +E L V+R
Sbjct: 68 GIELLAKLREAGIGVPLIMITAQGSIESAVEAMRLGACDYLLRPFDVEALDLAINRVLRV 127
Query: 143 KKVGPKDQNKLLNQENSRVGAGEGG 167
+ G D N+ L +++ RV G G
Sbjct: 128 Q--GVLDHNQYLREQDDRVWQGLVG 150
>gi|359952798|gb|AEV91189.1| MYB-related protein [Triticum aestivum]
Length = 394
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/62 (62%), Positives = 49/62 (79%), Gaps = 1/62 (1%)
Query: 210 QKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLM-NVEGLTRENVASHLQKFRLYLK 268
++K +V WTPELHR+FV AV QLG+DKAVP +IL+LM N LTR N+ASHLQK+R + K
Sbjct: 92 RRKVKVDWTPELHRRFVQAVEQLGLDKAVPSRILELMGNEYRLTRHNIASHLQKYRSHRK 151
Query: 269 RL 270
L
Sbjct: 152 HL 153
>gi|328952038|ref|YP_004369372.1| response regulator receiver protein [Desulfobacca acetoxidans DSM
11109]
gi|328452362|gb|AEB08191.1| response regulator receiver protein [Desulfobacca acetoxidans DSM
11109]
Length = 135
Score = 81.3 bits (199), Expect = 2e-12, Method: Composition-based stats.
Identities = 45/111 (40%), Positives = 68/111 (61%), Gaps = 6/111 (5%)
Query: 25 RVLAVDDDPTCLKVLENFLRA-CQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
R+L VDD+P L++L+ + YEV TN + K+L+E FDL+I+D+ MP +D
Sbjct: 4 RILVVDDEPNMLRLLKAIITGKTSYEVVTTNNPLEVSKLLQEEL--FDLLITDLKMPLLD 61
Query: 84 GFKLLEHVGLEMD--LPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEEL 132
G L++ V +MD LP+IM++AYG + + I GA DY+ KP R E +
Sbjct: 62 GMDLIDTVK-KMDPTLPIIMITAYGTIETAEEAIQKGAYDYITKPFRQEAI 111
>gi|209527854|ref|ZP_03276344.1| two component transcriptional regulator, winged helix family
[Arthrospira maxima CS-328]
gi|376006010|ref|ZP_09783358.1| Two component transcriptional regulator, winged helix family
[Arthrospira sp. PCC 8005]
gi|423064997|ref|ZP_17053787.1| two component transcriptional regulator winged helix family
[Arthrospira platensis C1]
gi|209491711|gb|EDZ92076.1| two component transcriptional regulator, winged helix family
[Arthrospira maxima CS-328]
gi|375325627|emb|CCE19111.1| Two component transcriptional regulator, winged helix family
[Arthrospira sp. PCC 8005]
gi|406714240|gb|EKD09408.1| two component transcriptional regulator winged helix family
[Arthrospira platensis C1]
Length = 243
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 69/118 (58%), Gaps = 2/118 (1%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
R+L VDD+ + ++LE L Y+V AL++ R+ DLV+ DV MP +DG
Sbjct: 7 RILVVDDEASIRRILETRLSMIGYDVVTAADGEEALEIFRQTEP--DLVVLDVMMPKLDG 64
Query: 85 FKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRR 142
+ + + + E D+P+IML+A GD + G+ GA DY++KP +EL+ + V+RR
Sbjct: 65 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|318041885|ref|ZP_07973841.1| two-component response regulator [Synechococcus sp. CB0101]
Length = 254
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 74/122 (60%), Gaps = 2/122 (1%)
Query: 21 PIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMP 80
P G+++L DD+ ++LE L +EV + + AL++ R + DLV+ DV MP
Sbjct: 10 PEGLKILVADDEANIRRILETRLTMQGHEVLMASNGAEALELFRGSEP--DLVVLDVMMP 67
Query: 81 DMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
++DGF ++E + + ++P+I+L+A GD + G+ GA DY++KP +EL+ + V+
Sbjct: 68 ELDGFAVVERIRAQSEVPIILLTALGDVADRITGLQLGADDYMVKPFSPKELEARIRCVM 127
Query: 141 RR 142
RR
Sbjct: 128 RR 129
>gi|427735595|ref|YP_007055139.1| PAS domain-containing protein [Rivularia sp. PCC 7116]
gi|427370636|gb|AFY54592.1| PAS domain S-box [Rivularia sp. PCC 7116]
Length = 505
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 84/148 (56%), Gaps = 8/148 (5%)
Query: 19 KFPI-GMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDV 77
+FP+ +L +DD P L +L L+ Y+V +A TAL+ + DL++ DV
Sbjct: 12 QFPMPKADILVIDDTPENLALLSQILKDKNYKVRSVTKASTALRGAKAAPP--DLILLDV 69
Query: 78 HMPDMDGFKLLEHVGLE---MDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEE-LK 133
MP+M+G+++ +H+ + D+PVI +SA GD +K G DY+ KP+++EE L
Sbjct: 70 KMPEMNGYEVCQHLKADESTRDIPVIFISALGDVLDKVKAFEVGGVDYITKPLQVEEVLA 129
Query: 134 NIWQHV-IRRKKVGPKDQNKLLNQENSR 160
I H+ IRR + + QNK L QE S+
Sbjct: 130 RIETHLTIRRLQKQLQTQNKHLQQEISQ 157
>gi|113474512|ref|YP_720573.1| adenylate/guanylate cyclase [Trichodesmium erythraeum IMS101]
gi|110165560|gb|ABG50100.1| adenylate/guanylate cyclase [Trichodesmium erythraeum IMS101]
Length = 1133
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 81/150 (54%), Gaps = 12/150 (8%)
Query: 19 KFPIG-MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDV 77
K P G VL VDD+P ++VL N+L+A Y+VT AL L EN +NFDL++ DV
Sbjct: 716 KIPNGDFHVLVVDDEPINIQVLNNYLKANNYQVTQALSGKEALAAL-ENNHNFDLILLDV 774
Query: 78 HMPDMDGFKLLEHVGLEM---DLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKN 134
MP+M G+++ + + LPV+ML+A ++ G GA DYL KP +EL
Sbjct: 775 MMPNMSGYEVCSQIREKYPAQSLPVLMLTAKNQIADLVMGFQFGANDYLTKPFAKDELLT 834
Query: 135 IWQHVIRRKKVG-------PKDQNKLLNQE 157
Q I+ K+ P + +LL++E
Sbjct: 835 RIQTHIKLSKITKAYERFVPHEYVELLSKE 864
>gi|357441399|ref|XP_003590977.1| Two-component response regulator ARR2 [Medicago truncatula]
gi|355480025|gb|AES61228.1| Two-component response regulator ARR2 [Medicago truncatula]
Length = 388
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/59 (64%), Positives = 46/59 (77%), Gaps = 1/59 (1%)
Query: 207 STTQKKPRVVWTPELHRKFVGAVNQL-GVDKAVPKKILDLMNVEGLTRENVASHLQKFR 264
+T+Q KPR+ WTPELH FV AVNQL G +KA PK +L+LM VEGLT +V SHLQK+R
Sbjct: 170 TTSQSKPRMRWTPELHEAFVEAVNQLGGSEKATPKGVLNLMKVEGLTIYHVKSHLQKYR 228
>gi|343512279|ref|ZP_08749414.1| transcriptional regulatory protein CpxR [Vibrio scophthalmi LMG
19158]
gi|342795682|gb|EGU31393.1| transcriptional regulatory protein CpxR [Vibrio scophthalmi LMG
19158]
Length = 252
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 78/139 (56%), Gaps = 14/139 (10%)
Query: 26 VLAVDDDPTCLKVLENFLRACQYEVTVTN-----QAVTALKMLRENRNNFDLVISDVHMP 80
+L V+DD L L+A Y TVTN QA+T LKM FDL++ DV++P
Sbjct: 26 ILLVEDDLNLNHQLTALLQANSY--TVTNLECGAQALTLLKM-----RQFDLILLDVNVP 78
Query: 81 DMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
++DGF LL++V PVIML+AYG + +KG+ +GA DY+ KP EE+K + V+
Sbjct: 79 NIDGFGLLKYVRSHSRTPVIMLTAYGAEEHRIKGLRNGADDYISKPCNFEEVKLRIEAVL 138
Query: 141 RRKK--VGPKDQNKLLNQE 157
RR + P L QE
Sbjct: 139 RRTQQLAAPTSSRYLSYQE 157
>gi|150018635|ref|YP_001310889.1| two component, sigma54 specific, Fis family transcriptional
regulator [Clostridium beijerinckii NCIMB 8052]
gi|149905100|gb|ABR35933.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Clostridium beijerinckii NCIMB 8052]
Length = 472
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 83/153 (54%), Gaps = 10/153 (6%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+RVL DD+ + VL+ L YEV AL M +EN ++D+ I D+ MP++D
Sbjct: 15 VRVLVADDELSLRMVLQTALNKVGYEVDTVKNGKEALCMAQEN--HYDVAILDIRMPEVD 72
Query: 84 GFKLLEHV-GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRR 142
G + + ++ +LP+I+++A+G ++ + + HGA DY+LKP ++E+K I IR
Sbjct: 73 GLQAFYEIHKIKPNLPIILMTAFGSSETAVNAMKHGAYDYILKPFNLDEVKIIVSRAIRM 132
Query: 143 KKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGN 175
+++ + L QE E G AM+ G
Sbjct: 133 QQL--TKEVVYLTQE-----VQEMGMTAMTPGK 158
>gi|403381459|ref|ZP_10923516.1| integral membrane sensor hybrid histidine kinase [Paenibacillus sp.
JC66]
Length = 1069
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 70/123 (56%), Gaps = 8/123 (6%)
Query: 15 GDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVI 74
G+I + P+ +L VDDDP L+V+E L YEVT+ AL ML ++ +DLVI
Sbjct: 738 GNIPRRPL---ILMVDDDPVNLQVMEAILSPDNYEVTMVTSGKEALAML--DKKEWDLVI 792
Query: 75 SDVHMPDMDGFKLLEHVGLEM---DLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEE 131
SD+ MP M G++L + +LPV++L+A K + G GA DY+ KPV E
Sbjct: 793 SDIMMPQMSGYELTRKIRERFTLTELPVLLLTARDQGKDIQAGFLAGANDYVAKPVEALE 852
Query: 132 LKN 134
+++
Sbjct: 853 IRS 855
>gi|333907190|ref|YP_004480776.1| two component, sigma54 specific, Fis family transcriptional
regulator [Marinomonas posidonica IVIA-Po-181]
gi|333477196|gb|AEF53857.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Marinomonas posidonica IVIA-Po-181]
Length = 449
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 69/115 (60%), Gaps = 9/115 (7%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYE---VTVTNQAVTALKMLRENRNNFDLVISDVHMP 80
+++L V+DD + LE+ L Y+ V +AV ALK FD+V+SDV++P
Sbjct: 4 VKLLIVEDDKGLAEALEDTLMLASYQCKMVYSAEEAVIALK-----HGQFDMVVSDVNLP 58
Query: 81 DMDGFKLLEHV-GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKN 134
MDG+ LL HV +LP+++++AYGD ++ + GA DYLLKP + EEL N
Sbjct: 59 GMDGYGLLHHVVDAYPELPIMLMTAYGDIAHAVEAMRDGAVDYLLKPFQEEELLN 113
>gi|441506366|ref|ZP_20988339.1| Chitin catabolic cascade sensor histidine kinase ChiS
[Photobacterium sp. AK15]
gi|441425984|gb|ELR63473.1| Chitin catabolic cascade sensor histidine kinase ChiS
[Photobacterium sp. AK15]
Length = 1127
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 82/159 (51%), Gaps = 6/159 (3%)
Query: 13 EDGDIDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDL 72
+D D+ + G +L VDD+P L+VL N+LR Y V AL++L + L
Sbjct: 709 DDADLPENADGDLLLIVDDEPVNLQVLTNYLRLEGYRVITAENGPQALELLESEQPA--L 766
Query: 73 VISDVHMPDMDGFKLLEHVGLE---MDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRI 129
++ D+ MP M+G+++ + + E + LP+IMLSA G + +KG +GA DYL KP
Sbjct: 767 LLLDIMMPGMNGYEVCQQLRKEHTPLSLPIIMLSALGQVQDRVKGFEYGANDYLTKPFNK 826
Query: 130 EEL-KNIWQHVIRRKKVGPKDQNKLLNQENSRVGAGEGG 167
EEL I H+ K +N+ L QE E G
Sbjct: 827 EELTARIRAHIQAGKAEFRHQKNQELEQEIKHREQIEAG 865
>gi|224285460|gb|ACN40452.1| unknown [Picea sitchensis]
Length = 400
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/61 (60%), Positives = 48/61 (78%)
Query: 210 QKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKR 269
++K +V WT +LHR+FV AV QLGV+KAVP +IL+LM V LTR N+ASHLQK+R + K
Sbjct: 123 KRKIKVDWTQDLHRRFVQAVEQLGVEKAVPSRILELMGVNCLTRHNIASHLQKYRSHRKH 182
Query: 270 L 270
L
Sbjct: 183 L 183
>gi|334135541|ref|ZP_08509026.1| response regulator receiver domain protein [Paenibacillus sp. HGF7]
gi|333606965|gb|EGL18294.1| response regulator receiver domain protein [Paenibacillus sp. HGF7]
Length = 531
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 82/138 (59%), Gaps = 9/138 (6%)
Query: 22 IGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQA---VTALKMLRENRNNFDLVISDVH 78
+ ++ L VDD+ L+ L+ + ++++ V A V AL+M++E++ DL++SD+
Sbjct: 3 MNLKALLVDDEINILRNLQTVIPWEKHDIEVVALASNGVKALEMVQEHQP--DLILSDIR 60
Query: 79 MPDMDGFKLLEHVG-LEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQ 137
MP MDG LLE V LE D+ VI+L+ + + + + +GA DY+LKP+ EEL+ + +
Sbjct: 61 MPLMDGIALLEQVNKLERDIQVILLTGFQEFEYARSALKYGAKDYILKPINYEELEAVVE 120
Query: 138 HV---IRRKKVGPKDQNK 152
V IR K+ D+ K
Sbjct: 121 RVAFDIREKRKAEMDEQK 138
>gi|326490261|dbj|BAJ84794.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 355
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/58 (67%), Positives = 46/58 (79%), Gaps = 1/58 (1%)
Query: 214 RVVWTPELHRKFVGAVNQLGVDKAVPKKILDLM-NVEGLTRENVASHLQKFRLYLKRL 270
RV WTPELHR+FV AV QLG+DKAVP +IL+LM N LTR N+ASHLQK+R + K L
Sbjct: 53 RVDWTPELHRRFVQAVEQLGLDKAVPSRILELMGNEYRLTRHNIASHLQKYRSHRKHL 110
>gi|428779964|ref|YP_007171750.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Dactylococcopsis salina PCC 8305]
gi|428694243|gb|AFZ50393.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Dactylococcopsis salina PCC 8305]
Length = 244
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 68/118 (57%), Gaps = 2/118 (1%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
++L VDD+ + ++LE L Y+V A+ N NN DLV+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAADGEEAITTF--NENNPDLVVLDVMMPKLDG 64
Query: 85 FKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRR 142
+ + + + E D+P+IML+A GD + G+ GA DY++KP +EL+ + V+RR
Sbjct: 65 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|17232371|ref|NP_488919.1| two-component hybrid sensor and regulator [Nostoc sp. PCC 7120]
gi|17134016|dbj|BAB76578.1| two-component hybrid sensor and regulator [Nostoc sp. PCC 7120]
Length = 407
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 77/138 (55%), Gaps = 7/138 (5%)
Query: 21 PIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMP 80
PI VL VDD PT +KVL + L + V+V ++AL ++E N L++ DV MP
Sbjct: 4 PINNSVLIVDDIPTNIKVLFDILNQAGFRVSVAKNGLSALAKVQETLPN--LILLDVMMP 61
Query: 81 DMDGFKLLEHVGL---EMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEE-LKNIW 136
MDGF+ H+ D+PVI ++A DT +KG+ GA DY+ KP+ EE L I
Sbjct: 62 GMDGFETCRHLKANPKTKDIPVIFMTALSDTVNKVKGLQIGAVDYITKPIEYEEVLARIN 121
Query: 137 QHV-IRRKKVGPKDQNKL 153
H+ +RR ++ + K+
Sbjct: 122 VHLELRRTQLKLAQEEKM 139
>gi|222524928|ref|YP_002569399.1| winged helix family two component transcriptional regulator
[Chloroflexus sp. Y-400-fl]
gi|222448807|gb|ACM53073.1| two component transcriptional regulator, winged helix family
[Chloroflexus sp. Y-400-fl]
Length = 245
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 71/126 (56%), Gaps = 2/126 (1%)
Query: 17 IDKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISD 76
+D+ P R+L DDDP+ ++++ L QYE TV + AL+ R +DL+ D
Sbjct: 12 VDQPPPKRRILVADDDPSIGRLIQTALPTQQYETTVVANGLEALEAF--ERETYDLIFLD 69
Query: 77 VHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIW 136
V MP +DGF E + + D+P+++++A T +++G GA +Y+ KP ++ E
Sbjct: 70 VMMPFVDGFDACERIRAKSDVPIVIITAREGTDDIVQGFRRGADEYITKPFKVAEFVARV 129
Query: 137 QHVIRR 142
+ ++RR
Sbjct: 130 EAILRR 135
>gi|389844206|ref|YP_006346286.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Mesotoga prima MesG1.Ag.4.2]
gi|387858952|gb|AFK07043.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Mesotoga prima MesG1.Ag.4.2]
Length = 220
Score = 80.9 bits (198), Expect = 2e-12, Method: Composition-based stats.
Identities = 52/121 (42%), Positives = 70/121 (57%), Gaps = 4/121 (3%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
R++ V+DD K+L L YEV V ALK L + DL+I DV +P +DG
Sbjct: 4 RIMVVEDDMHIGKLLRLELGHEGYEVEVLTDGKEALKHLEKELP--DLLILDVMLPGLDG 61
Query: 85 FKLLEHVG--LEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRR 142
F +LE + + DLPVIML+A G+ K ++G+ GA DYL KP IEEL + V+RR
Sbjct: 62 FSVLEEIREYISTDLPVIMLTAKGEVKDRIRGLKSGADDYLPKPFVIEELLARIEAVLRR 121
Query: 143 K 143
K
Sbjct: 122 K 122
>gi|295913318|gb|ADG57915.1| transcription factor [Lycoris longituba]
Length = 150
Score = 80.9 bits (198), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/75 (46%), Positives = 58/75 (77%)
Query: 198 DDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVA 257
D++ ++ S+ ++ R+VWTP+LH++F+ + +LG + VPKKI+++MNVEGLTRE+VA
Sbjct: 74 DEEVLKDSCSSRNQRRRLVWTPQLHKRFLDVMARLGSKEVVPKKIMEMMNVEGLTREHVA 133
Query: 258 SHLQKFRLYLKRLSN 272
SHLQK+++ K S+
Sbjct: 134 SHLQKYQMKFKESSS 148
>gi|260777772|ref|ZP_05886665.1| two component transcriptional regulator winged helix family [Vibrio
coralliilyticus ATCC BAA-450]
gi|260605785|gb|EEX32070.1| two component transcriptional regulator winged helix family [Vibrio
coralliilyticus ATCC BAA-450]
Length = 250
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 72/117 (61%), Gaps = 2/117 (1%)
Query: 26 VLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDGF 85
+L V+DD + L + L+ +Y+VT + AL L+++ NFDL+I D+++P++DGF
Sbjct: 27 ILLVEDDRHLNQQLTSLLQDSRYQVTNLDCGAEALNCLKQS--NFDLIILDINLPEVDGF 84
Query: 86 KLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRR 142
LL + + PVIML+AYG + ++G+ +GA DY+ KP E+ + ++RR
Sbjct: 85 GLLNFIRFHSNTPVIMLTAYGAEEHRIRGLRYGADDYISKPCNFTEVSLRIEAILRR 141
>gi|407796717|ref|ZP_11143669.1| DNA-binding response regulator [Salimicrobium sp. MJ3]
gi|407018871|gb|EKE31591.1| DNA-binding response regulator [Salimicrobium sp. MJ3]
Length = 221
Score = 80.9 bits (198), Expect = 2e-12, Method: Composition-based stats.
Identities = 52/142 (36%), Positives = 77/142 (54%), Gaps = 3/142 (2%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
++L VDD L +LE +LR YE+T AL+MLRE FDLV+ D+ M MDG
Sbjct: 3 KLLVVDDQERMLNLLELYLRPHGYEITKVPSGQEALRMLRER--PFDLVLLDIMMEGMDG 60
Query: 85 FKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKK 144
F+ + DLPV+ML+A + V+KG+ GA DY+ KP + L + ++RR
Sbjct: 61 FETCRRLRTFSDLPVLMLTAKDQKEDVVKGLKTGADDYVTKPFDEDILVARIETLLRRST 120
Query: 145 VGPKDQNKLL-NQENSRVGAGE 165
+ N L+ +EN + G+
Sbjct: 121 PVSIEMNGLIWKEENYELSYGK 142
>gi|258404235|ref|YP_003196977.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Desulfohalobium retbaense DSM 5692]
gi|257796462|gb|ACV67399.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Desulfohalobium retbaense DSM 5692]
Length = 448
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 73/128 (57%), Gaps = 3/128 (2%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
R+L +DD+P LKVL FL YEV + L L+E +D++I+D+ +PD+ G
Sbjct: 6 RILLIDDEPNTLKVLSAFLTKEGYEVGTAKDGRSGLNHLQEG--GWDMLITDLKLPDITG 63
Query: 85 FKLLEHVGLEM-DLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRK 143
+LE V LPV+M++AYG ++ + GA +YL KPV +EL + Q+V R
Sbjct: 64 LDILEQVKATWPKLPVVMITAYGSISNAVQAMKLGAFNYLTKPVDPDELLLLVQNVFERS 123
Query: 144 KVGPKDQN 151
++ ++Q
Sbjct: 124 QLLEENQT 131
>gi|152997453|ref|YP_001342288.1| two component sigma-54-specific Fis family transcriptional
regulator [Marinomonas sp. MWYL1]
gi|150838377|gb|ABR72353.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Marinomonas sp. MWYL1]
Length = 448
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 71/115 (61%), Gaps = 9/115 (7%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTV---TNQAVTALKMLRENRNNFDLVISDVHMP 80
+++L V+DD + LE+ L Y+ + + +AV ALK + FD+VISDV++P
Sbjct: 4 VKLLIVEDDKGLAEALEDTLMLASYQCKIVYSSEEAVVALK-----HSLFDMVISDVNLP 58
Query: 81 DMDGFKLLEHV-GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKN 134
MDG+ LL HV +LP+++++AYGD ++ + GA DYLLKP + EEL N
Sbjct: 59 GMDGYGLLHHVIDTYPELPMMLMTAYGDIAHAVEAMRDGAVDYLLKPFQEEELLN 113
>gi|86606063|ref|YP_474826.1| DNA-binding response regulator [Synechococcus sp. JA-3-3Ab]
gi|86554605|gb|ABC99563.1| DNA-binding response regulator [Synechococcus sp. JA-3-3Ab]
Length = 243
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 70/118 (59%), Gaps = 2/118 (1%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
R+L VDD+ + ++LE L Y+V AL++ R + + DLV+ DV MP +DG
Sbjct: 8 RILVVDDEASIRRILETRLSMIGYDVVTAADGEEALEVFR--KQDPDLVVLDVMMPKLDG 65
Query: 85 FKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRR 142
+ + + + E D+P+IML+A GD + G+ GA DY++KP +EL+ + V+RR
Sbjct: 66 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 123
>gi|405983351|ref|ZP_11041657.1| hypothetical protein HMPREF9451_00747 [Slackia piriformis YIT
12062]
gi|404388957|gb|EJZ84038.1| hypothetical protein HMPREF9451_00747 [Slackia piriformis YIT
12062]
Length = 220
Score = 80.9 bits (198), Expect = 2e-12, Method: Composition-based stats.
Identities = 43/120 (35%), Positives = 68/120 (56%), Gaps = 3/120 (2%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
R+LA+DD+PT L +L L+ +EVT A AL++ N + FDL++ DV MP DG
Sbjct: 3 RILAIDDEPTILSLLATILKKDGHEVTAVESADRALEL---NLSRFDLILCDVMMPGTDG 59
Query: 85 FKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKK 144
F + V +D P++ L+A + + G++ GA DY+ KP EL+ +RR++
Sbjct: 60 FAFVSVVRDRLDCPIVFLTAKSEENDAVTGLSVGADDYIRKPFGAAELRAKVSAHLRRER 119
>gi|379025904|dbj|BAL63729.1| pseudo-response regulator [Triticum turanicum]
gi|379025906|dbj|BAL63730.1| pseudo-response regulator [Triticum turanicum]
gi|379025908|dbj|BAL63731.1| pseudo-response regulator [Triticum polonicum]
Length = 665
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 70/123 (56%), Gaps = 4/123 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPD-M 82
+RVL V+ D + +V+ LR C Y+ A L++ ++N DLV+++V M +
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQGLPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 94
Query: 83 DGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
G LL + + D+PVI +S++ V+ +++GA D+L KP+R ELKN+W HV
Sbjct: 95 SGIDLLGRIMNHEVCKDIPVISMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 154
Query: 140 IRR 142
RR
Sbjct: 155 WRR 157
>gi|379008547|ref|YP_005257998.1| winged helix family two component transcriptional regulator
[Sulfobacillus acidophilus DSM 10332]
gi|361054809|gb|AEW06326.1| two component transcriptional regulator, winged helix family
[Sulfobacillus acidophilus DSM 10332]
Length = 238
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 80/149 (53%), Gaps = 10/149 (6%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
RVL VDDD ++ +L ++V TAL L ++ D+++ D+ +P+MDG
Sbjct: 9 RVLLVDDDAHIRELCRMYLEHAGFDVLEAGDGPTALTQLEQH--PVDVMVLDLMLPEMDG 66
Query: 85 FKLLEHVGL-EMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRK 143
F++L V E LPVIML+A GD + + G+ GA DYL+KP EL + + V+RR
Sbjct: 67 FQVLAEVRRRETWLPVIMLTALGDEEDRIMGLDQGADDYLIKPFSPRELVSRVRAVLRRA 126
Query: 144 KVGPKDQNKLLNQ-------ENSRVGAGE 165
+ P D+ KLL RV AG+
Sbjct: 127 FLAPADEGKLLRHPGLIVDVAQRRVQAGD 155
>gi|325265300|ref|ZP_08132025.1| subtilin biosynthesis regulatory protein SpaR [Clostridium sp. D5]
gi|324029479|gb|EGB90769.1| subtilin biosynthesis regulatory protein SpaR [Clostridium sp. D5]
Length = 219
Score = 80.9 bits (198), Expect = 2e-12, Method: Composition-based stats.
Identities = 43/119 (36%), Positives = 67/119 (56%), Gaps = 3/119 (2%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
R+LAVDD+P L V+ L + VTV N A ++ EN N +DL++ D+ MP DG
Sbjct: 3 RILAVDDEPAILTVIRRALEKEGHSVTVLN---CADEIKTENLNQYDLLLLDIMMPGTDG 59
Query: 85 FKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRK 143
++ + ++D P++ L+A D +M G+ G DY+ KP I EL+ Q +RR+
Sbjct: 60 ITFVKQIRSQVDCPILFLTARTDENSIMYGLASGGDDYITKPFGIGELRARVQAHLRRE 118
>gi|118351764|ref|XP_001009157.1| Protein kinase domain containing protein [Tetrahymena thermophila]
gi|89290924|gb|EAR88912.1| Protein kinase domain containing protein [Tetrahymena thermophila
SB210]
Length = 818
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 85/156 (54%), Gaps = 7/156 (4%)
Query: 22 IGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPD 81
+ + VL +DD L + L C Y+VT A L + +N D+V+ D++MP+
Sbjct: 1 MNIHVLVAEDDNFQRLALIDILTLCDYQVTAVENGRLARDELLKQDSNIDIVLLDLYMPE 60
Query: 82 MDGFKLL----EHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQ 137
MDGF+LL EH L+ +PVIM+S+ + + V I GA DY+ KP+R++ +K I +
Sbjct: 61 MDGFELLSLMQEHENLQ-KIPVIMMSSDKEEEKVATCIAKGAKDYIFKPLRVQNVKAIAK 119
Query: 138 HVIRRKKVGPKDQNKL-LNQENSRVGAGEGGQGAMS 172
+V + K G K+ N + + Q G+G G++
Sbjct: 120 YV-QYKDQGDKNSNLVGIQQYKVLKTLGQGASGSVE 154
>gi|91781372|ref|YP_556579.1| two component heavy metal response transcriptional regulator
[Burkholderia xenovorans LB400]
gi|91694032|gb|ABE37229.1| two component heavy metal response transcriptional regulator,
winged helix family [Burkholderia xenovorans LB400]
Length = 224
Score = 80.9 bits (198), Expect = 2e-12, Method: Composition-based stats.
Identities = 46/131 (35%), Positives = 74/131 (56%), Gaps = 4/131 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
MR+L ++D+ + L N L Y V V + L + E R +DL++ DV MP+MD
Sbjct: 1 MRILVIEDEAKTGEYLLNGLTEAGYVVDVAANGIDGLHLANEMR--YDLILLDVMMPEMD 58
Query: 84 GFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRK 143
G+ +++ +G +D PV+ LSA G + +KG+ GA DYL+KP EL + ++RR
Sbjct: 59 GWSVMKKLGARLDTPVLFLSARGTLEDRLKGLDLGADDYLVKPFSFAELLARIRIILRRG 118
Query: 144 KVGPKDQNKLL 154
+ P+ Q + L
Sbjct: 119 Q--PQKQEERL 127
>gi|317968094|ref|ZP_07969484.1| two-component response regulator [Synechococcus sp. CB0205]
Length = 249
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 68/117 (58%), Gaps = 2/117 (1%)
Query: 26 VLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDGF 85
+L VDD+P+ ++LE L Y+V AL+ R N DLV+ DV MP +DG+
Sbjct: 12 ILVVDDEPSIRRILETRLSMIGYQVVTACDGQEALEAFRNT--NPDLVVLDVMMPKLDGY 69
Query: 86 KLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRR 142
+ + + E D+P++ML+A GD + G+ GA DY++KP +EL+ + V+RR
Sbjct: 70 GVCQELRKESDVPIVMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRCVLRR 126
>gi|75908368|ref|YP_322664.1| response regulator receiver signal transduction histidine kinase
[Anabaena variabilis ATCC 29413]
gi|75702093|gb|ABA21769.1| Response Regulator Receiver Signal Transduction Histidine Kinase
[Anabaena variabilis ATCC 29413]
Length = 407
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 77/138 (55%), Gaps = 7/138 (5%)
Query: 21 PIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMP 80
PI VL VDD PT +KVL + L + V+V ++AL ++E N L++ DV MP
Sbjct: 4 PINNSVLIVDDIPTNIKVLFDILNQAGFRVSVAKNGLSALAKVQETLPN--LILLDVMMP 61
Query: 81 DMDGFKLLEHVGL---EMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEE-LKNIW 136
MDGF+ H+ D+PVI ++A DT +KG+ GA DY+ KP+ EE L I
Sbjct: 62 GMDGFETCRHLKANPKTKDIPVIFMTALSDTVNKVKGLQIGAVDYITKPIEYEEVLARIN 121
Query: 137 QHV-IRRKKVGPKDQNKL 153
H+ +RR ++ + K+
Sbjct: 122 VHLELRRTQLKLAQEEKM 139
>gi|253995418|ref|YP_003047482.1| Fis family two component sigma54 specific transcriptional regulator
[Methylotenera mobilis JLW8]
gi|253982097|gb|ACT46955.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Methylotenera mobilis JLW8]
Length = 457
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 68/109 (62%), Gaps = 3/109 (2%)
Query: 26 VLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDGF 85
+LAVDD+P+ L++LE LR Y+ AL+++ N D V++D+HMP MDG
Sbjct: 8 ILAVDDEPSMLRLLEISLRQAGYQPLTARDGREALEVI--NAQQVDCVVTDLHMPRMDGL 65
Query: 86 KLLEHV-GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELK 133
+LL+ V + +LPVI+++A G+ + + +GA DY+L+P + EL+
Sbjct: 66 QLLKEVRKTDTELPVIIVTAQGEIGSAIDAMKNGASDYILRPFDLAELE 114
>gi|303246663|ref|ZP_07332941.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Desulfovibrio fructosovorans JJ]
gi|302492003|gb|EFL51881.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Desulfovibrio fructosovorans JJ]
Length = 459
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 66/118 (55%), Gaps = 3/118 (2%)
Query: 26 VLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDGF 85
+LAVDDDP L+VLE L + Y+V AL++L + L+ISD+ MP MDG
Sbjct: 13 ILAVDDDPHILEVLEVRLVSAGYDVVTAEDGTEALEIL--SSRPVRLLISDIRMPGMDGM 70
Query: 86 KLLEH-VGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRR 142
+L E V + LP+I L+A+G ++ I HGA DYL KP +EL + V R
Sbjct: 71 RLQEEMVRRGLSLPIIFLTAHGSIPGAVEAIKHGAVDYLTKPFDGQELLSRVAEVFAR 128
>gi|403235663|ref|ZP_10914249.1| winged helix family two component transcriptional regulator
[Bacillus sp. 10403023]
Length = 229
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 78/144 (54%), Gaps = 1/144 (0%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
M++L V+DD T L L YE + + A A +++ E N DL + D+ +PD
Sbjct: 1 MKILLVEDDKTIATGLNYSLTQDGYETFICHNADDAKRVINEKINEIDLCLFDLSLPDGS 60
Query: 84 GFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRK 143
G++L E V +MD PVI L+A D V+ G+ GA DY+ KP RI EL + + V+RR
Sbjct: 61 GYELCELVKKQMDKPVIFLTALDDEVNVVMGLDMGADDYITKPFRIRELLSRIKSVLRRY 120
Query: 144 KVGPKDQNK-LLNQENSRVGAGEG 166
Q K +++ EN RV EG
Sbjct: 121 NKQTIAQPKTIIDIENIRVNTLEG 144
>gi|339627070|ref|YP_004718713.1| response regulator receiver [Sulfobacillus acidophilus TPY]
gi|339284859|gb|AEJ38970.1| response regulator receiver [Sulfobacillus acidophilus TPY]
Length = 243
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 80/149 (53%), Gaps = 10/149 (6%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
RVL VDDD ++ +L ++V TAL L ++ D+++ D+ +P+MDG
Sbjct: 14 RVLLVDDDAHIRELCRMYLEHAGFDVLEAGDGPTALTQLEQH--PVDVMVLDLMLPEMDG 71
Query: 85 FKLLEHVGL-EMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRK 143
F++L V E LPVIML+A GD + + G+ GA DYL+KP EL + + V+RR
Sbjct: 72 FQVLAEVRRRETWLPVIMLTALGDEEDRIMGLDQGADDYLIKPFSPRELVSRVRAVLRRA 131
Query: 144 KVGPKDQNKLLNQ-------ENSRVGAGE 165
+ P D+ KLL RV AG+
Sbjct: 132 FLAPADEGKLLRHPGLIVDVAQRRVQAGD 160
>gi|384431901|ref|YP_005641261.1| winged helix family two component transcriptional regulator
[Thermus thermophilus SG0.5JP17-16]
gi|333967369|gb|AEG34134.1| two component transcriptional regulator, winged helix family
[Thermus thermophilus SG0.5JP17-16]
Length = 225
Score = 80.5 bits (197), Expect = 3e-12, Method: Composition-based stats.
Identities = 46/120 (38%), Positives = 72/120 (60%), Gaps = 5/120 (4%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
MRVL VDDDP L+VL +LR +EV AL++ DL+I D+ +P +D
Sbjct: 1 MRVLLVDDDPALLEVLGAYLRGAGFEVLQAEDGERALELYPRA----DLIILDLMLPKLD 56
Query: 84 GFKLLEHVGLEM-DLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRR 142
GF++L V E +LP++ML+A G+ + +KG+ GA DY++KP +E+ + ++RR
Sbjct: 57 GFRVLAEVRRERPELPILMLTARGEEEERVKGLELGADDYVVKPFSPKEVVARVKALLRR 116
>gi|329926298|ref|ZP_08280817.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein
[Paenibacillus sp. HGF5]
gi|328939333|gb|EGG35690.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein
[Paenibacillus sp. HGF5]
Length = 1050
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 67/113 (59%), Gaps = 5/113 (4%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+R+LAVDDDP L++L L A Y + V A AL++L +DL+I+DV MP+M
Sbjct: 719 VRILAVDDDPVNLRILAGILSAEPYNLNVVASAAEALELL--GSQPWDLLIADVMMPEMS 776
Query: 84 GFKLLEHVGLEM---DLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELK 133
G++L V +LPV++L+A G++ V G GA DY+ KPV EL+
Sbjct: 777 GYELTRTVRERFNASELPVLLLTARGESADVYAGFQSGANDYVTKPVDPVELR 829
>gi|373957995|ref|ZP_09617955.1| two component transcriptional regulator, winged helix family
[Mucilaginibacter paludis DSM 18603]
gi|373894595|gb|EHQ30492.1| two component transcriptional regulator, winged helix family
[Mucilaginibacter paludis DSM 18603]
Length = 228
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 77/121 (63%), Gaps = 5/121 (4%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
M VL V+D+P + V++ L +E++V +TAL+M +++ FDLVI DV +P MD
Sbjct: 1 MAVLLVEDEPNIVSVIKRGLADFGFEISVATDGLTALQMTIDHQ--FDLVILDVMLPSMD 58
Query: 84 GFKLLEHVGLEMD--LPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIR 141
G +L +H+ E D +P++ML+A T+ ++ G+ GA DY++KP ++ EL + ++R
Sbjct: 59 GIQLCKHIR-ERDENIPILMLTALDSTENIVTGLNSGADDYMVKPFKMIELATRLKTLLR 117
Query: 142 R 142
R
Sbjct: 118 R 118
>gi|282898472|ref|ZP_06306462.1| Two component Transcriptional regulator, Winged helix family
[Raphidiopsis brookii D9]
gi|281196638|gb|EFA71544.1| Two component Transcriptional regulator, Winged helix family
[Raphidiopsis brookii D9]
Length = 242
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 69/118 (58%), Gaps = 2/118 (1%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
++L VDD+ + ++LE L Y+V AL+ R + N DLV+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAGDGEEALETFR--KANPDLVVLDVMMPKLDG 64
Query: 85 FKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRR 142
+ + + + E D+P+IML+A GD + G+ GA DY++KP +EL+ + V+RR
Sbjct: 65 YGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|307149957|ref|YP_003885341.1| winged helix family two component transcriptional regulator
[Cyanothece sp. PCC 7822]
gi|306980185|gb|ADN12066.1| two component transcriptional regulator, winged helix family
[Cyanothece sp. PCC 7822]
Length = 242
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 69/118 (58%), Gaps = 2/118 (1%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
++L VDD+ + ++LE L Y+V AL+ R+ N DLV+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAADGEEALETFRQT--NPDLVVLDVMMPKLDG 64
Query: 85 FKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRR 142
+ + + + E D+P+IML+A GD + G+ GA DY++KP +EL+ + V+RR
Sbjct: 65 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|329928026|ref|ZP_08282030.1| heme response regulator HssR [Paenibacillus sp. HGF5]
gi|328938130|gb|EGG34527.1| heme response regulator HssR [Paenibacillus sp. HGF5]
Length = 226
Score = 80.5 bits (197), Expect = 3e-12, Method: Composition-based stats.
Identities = 48/146 (32%), Positives = 81/146 (55%), Gaps = 7/146 (4%)
Query: 25 RVLAVDDDPTCLKVLENFLR-ACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
++L VDDDP ++++ FL A EV + V AL ++ + + DLV+ D+ MP+MD
Sbjct: 3 KILVVDDDPNIRELIKVFLEEAGMEEVMEASDGVEALSVMEQV--SVDLVVMDIMMPNMD 60
Query: 84 GFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRK 143
G++L + +PV+ML+A G+T+ ++KG G DYL+KP EL + +++R
Sbjct: 61 GWELCREIRRNTGIPVLMLTAKGETRQIVKGFELGTDDYLVKPFEPAELVVRVKALLKRY 120
Query: 144 KVGPKDQNKL----LNQENSRVGAGE 165
+V + +N+ V AGE
Sbjct: 121 QVAASQTVTIGKLQMNRRTYEVKAGE 146
>gi|325972397|ref|YP_004248588.1| response regulator receiver modulated metal dependent
phosphohydrolase [Sphaerochaeta globus str. Buddy]
gi|324027635|gb|ADY14394.1| response regulator receiver modulated metal dependent
phosphohydrolase [Sphaerochaeta globus str. Buddy]
Length = 341
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 84/180 (46%), Gaps = 19/180 (10%)
Query: 26 VLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDGF 85
++ DDDP K+L+ LR Y VT + L++LR++ + DL++ D+ MP GF
Sbjct: 5 IVTTDDDPAIRKILQIMLRKEGYMVTACEEGNGLLQLLRQSEESIDLILLDIKMPGFSGF 64
Query: 86 KLLEHVGLEM-DLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRR-- 142
+LLE + +P++M++A+ D MK + GA DYL KPV E L + V+
Sbjct: 65 ELLEMIRASYPQIPIVMITAFNDLDTGMKAMRMGASDYLAKPVHREALFATVKRVLDEAE 124
Query: 143 -------KKVGPKDQNKLLNQE---------NSRVGAGEGGQGAMSTGNSDQNGKSNRKR 186
K++ + Q LL E ++ + E + +S G NR R
Sbjct: 125 KEQQLLDKQMQSQHQRALLETELKEVLTSLQDTTIATLEAFSETIEQKDSYTKGHCNRVR 184
>gi|406980680|gb|EKE02250.1| hypothetical protein ACD_20C00407G0003 [uncultured bacterium]
Length = 248
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 80/151 (52%), Gaps = 14/151 (9%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
R+L VDD+ + ++LE L+ YEV AL ++ N DL+I DV MP +DG
Sbjct: 16 RILIVDDEASIRRILETRLKMVGYEVLTAADGEEALDAF--SKFNPDLLILDVMMPKLDG 73
Query: 85 FKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKK 144
+ ++ V + P+I+L+A GD + G+ GA DY++KP +EL+ + V+RR
Sbjct: 74 YGVVREVRKTSETPIIVLTALGDVSERITGLELGADDYVIKPFSPKELEARVKAVLRRT- 132
Query: 145 VGPKDQNKLLNQENSRVGAGEGGQGAMSTGN 175
NQ S VG G+ + ++TGN
Sbjct: 133 ----------NQRES-VGVGKVTKNVITTGN 152
>gi|148379930|ref|YP_001254471.1| DNA-binding response regulator [Clostridium botulinum A str. ATCC
3502]
gi|153931088|ref|YP_001384228.1| DNA-binding response regulator [Clostridium botulinum A str. ATCC
19397]
gi|153937795|ref|YP_001387768.1| DNA-binding response regulator [Clostridium botulinum A str. Hall]
gi|148289414|emb|CAL83510.1| two-component response regulator [Clostridium botulinum A str. ATCC
3502]
gi|152927132|gb|ABS32632.1| DNA-binding response regulator [Clostridium botulinum A str. ATCC
19397]
gi|152933709|gb|ABS39208.1| DNA-binding response regulator [Clostridium botulinum A str. Hall]
Length = 221
Score = 80.5 bits (197), Expect = 3e-12, Method: Composition-based stats.
Identities = 48/133 (36%), Positives = 71/133 (53%), Gaps = 3/133 (2%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
R+L V+DD ++ L+ Y V V + A++M R R NFDL+I DV +P +DG
Sbjct: 4 RILVVEDDFDIHTIISEVLKESGYLVEVATDGLIAVEMFR--RGNFDLIILDVMLPKIDG 61
Query: 85 FKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKK 144
F + E + E +P+IML+A G+ + MKG DY+ KP I L + V+RR
Sbjct: 62 FVVCEIIRKESSMPIIMLTALGEEEDEMKGFELKVDDYITKPFSINLLIKRVEAVLRRAN 121
Query: 145 VGPKDQNKLLNQE 157
G ++ N L E
Sbjct: 122 -GLEENNSTLTFE 133
>gi|398814805|ref|ZP_10573483.1| putative regulator of cell autolysis [Brevibacillus sp. BC25]
gi|398035893|gb|EJL29119.1| putative regulator of cell autolysis [Brevibacillus sp. BC25]
Length = 1042
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 68/125 (54%), Gaps = 12/125 (9%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
R+L VDDDP L+VLE L +YEVT+ AL +L + +DLVISD+ MP M G
Sbjct: 702 RLLIVDDDPVNLQVLEAILPPDEYEVTMVTSGKEALAIL--DTKEWDLVISDIMMPQMSG 759
Query: 85 FKLLEHVGLEM---DLPVIMLSAYGDTKLVMKGITHGACDYLLKPV-------RIEELKN 134
++L + +LPV++L+A K + G GA DY+ KPV RIE L
Sbjct: 760 YELTRMIRERFTLTELPVLLLTARSQPKDIQSGFLAGANDYVTKPVEGMEIKSRIEALTT 819
Query: 135 IWQHV 139
I Q V
Sbjct: 820 IKQSV 824
>gi|363585954|gb|AEW28962.1| sensory box sensor histidine kinase/response regulator
[Photobacterium damselae subsp. piscicida]
Length = 1130
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 77/139 (55%), Gaps = 6/139 (4%)
Query: 23 GMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDM 82
G +L VDD+P L++L NFLR Y V AL++++ ++ L++ D+ MP+M
Sbjct: 720 GELLLVVDDEPVNLQILNNFLRLEGYRVLTAESGKQALELVQSHKPA--LILLDIMMPEM 777
Query: 83 DGFKL---LEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEEL-KNIWQH 138
G+++ L ++LP++MLSA G K +KG GA DYL KP EEL I H
Sbjct: 778 SGYEVCSQLRQQYTPLELPIMMLSALGQVKDRVKGFECGANDYLTKPFNKEELTARIKAH 837
Query: 139 VIRRKKVGPKDQNKLLNQE 157
+ K +++N+ L QE
Sbjct: 838 LQAGKTEFEREKNRQLAQE 856
>gi|289524120|ref|ZP_06440974.1| DNA-binding response regulator ArlR [Anaerobaculum hydrogeniformans
ATCC BAA-1850]
gi|289502776|gb|EFD23940.1| DNA-binding response regulator ArlR [Anaerobaculum hydrogeniformans
ATCC BAA-1850]
Length = 228
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 71/120 (59%), Gaps = 3/120 (2%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
MRVL DDD + L+ L L + +Y V + + A+ L + FDLVI DV MP +D
Sbjct: 2 MRVLIADDDTSLLEQLREILASERYTVDTASNGIEAMDKLYDA--VFDLVILDVMMPHID 59
Query: 84 GFKLLEHVGLE-MDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRR 142
G LLE + +++PV+ML+A GD + +KG+ GA DYL KP I+EL + ++RR
Sbjct: 60 GLSLLEQIRKGGINIPVLMLTAKGDVEDKVKGLNLGADDYLAKPFSIDELLARVRALLRR 119
>gi|290973017|ref|XP_002669246.1| 3',5'-cyclic-nucleotide phosphodiesterase regA [Naegleria gruberi]
gi|284082791|gb|EFC36502.1| 3',5'-cyclic-nucleotide phosphodiesterase regA [Naegleria gruberi]
Length = 842
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 70/126 (55%), Gaps = 6/126 (4%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
+VL VDDD +VL L ++V AL++LRE NN+ L++ DV MPDMDG
Sbjct: 91 KVLVVDDDRVARQVLTKLLEQLGFQVKAVEGGKQALEVLREEGNNYHLLLVDVLMPDMDG 150
Query: 85 FKLLE--HVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKN----IWQH 138
+LL+ D+P+IM+S+ D + + GA D+L KPV++E LK +
Sbjct: 151 LQLLKIFRQAYSEDMPIIMVSSSEDPDTINQCFQSGAEDFLQKPVQLEILKRRVNMCLED 210
Query: 139 VIRRKK 144
+RR+K
Sbjct: 211 RLRRRK 216
>gi|269103478|ref|ZP_06156175.1| chitin catabolic cascade sensor histidine kinase ChiS
[Photobacterium damselae subsp. damselae CIP 102761]
gi|268163376|gb|EEZ41872.1| chitin catabolic cascade sensor histidine kinase ChiS
[Photobacterium damselae subsp. damselae CIP 102761]
Length = 1130
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 77/139 (55%), Gaps = 6/139 (4%)
Query: 23 GMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDM 82
G +L VDD+P L++L NFLR Y V AL++++ ++ L++ D+ MP+M
Sbjct: 720 GELLLVVDDEPVNLQILNNFLRLEGYRVLTAESGKQALELVQSHKPA--LILLDIMMPEM 777
Query: 83 DGFKL---LEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEEL-KNIWQH 138
G+++ L ++LP++MLSA G K +KG GA DYL KP EEL I H
Sbjct: 778 SGYEVCSQLRQQYTPLELPIMMLSALGQVKDRVKGFECGANDYLTKPFNKEELTARIKAH 837
Query: 139 VIRRKKVGPKDQNKLLNQE 157
+ K +++N+ L QE
Sbjct: 838 LQAGKTEFEREKNRQLAQE 856
>gi|114331551|ref|YP_747773.1| two component transcriptional regulator, winged helix family
protein [Nitrosomonas eutropha C91]
gi|114308565|gb|ABI59808.1| two component transcriptional regulator, winged helix family
[Nitrosomonas eutropha C91]
Length = 223
Score = 80.1 bits (196), Expect = 3e-12, Method: Composition-based stats.
Identities = 47/120 (39%), Positives = 71/120 (59%), Gaps = 3/120 (2%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
MR+L V+DD ++ L Y V V N A +A LR+ NFDLV+ D+ +PDMD
Sbjct: 1 MRILVVEDDSLVASGIKQGLINAGYTVDVANTAGSAEIHLRDE--NFDLVVVDIGLPDMD 58
Query: 84 GFKLLEHV-GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRR 142
G L++ + +M LPV++L+A G + + G+ GA DY++KP R+ EL + +IRR
Sbjct: 59 GLMLVQRLRNRQMRLPVLVLTARGSMEDTIAGLDVGADDYMVKPFRLPELAARIRALIRR 118
>gi|163744987|ref|ZP_02152347.1| two component diguanylate cyclase [Oceanibulbus indolifex HEL-45]
gi|161381805|gb|EDQ06214.1| two component diguanylate cyclase [Oceanibulbus indolifex HEL-45]
Length = 323
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 65/116 (56%), Gaps = 5/116 (4%)
Query: 24 MRVLAVDDDPTCLKVLENFLRAC-QYEVTVTNQAVTALKMLRE-NRNNFDLVISDVHMPD 81
MR+LAVDDDP L++L F+ +E+T A+ A+ ML + N D + D+ MP
Sbjct: 1 MRILAVDDDPIILELLGQFVEIIGAHELTTAPSALHAVDMLGDPNLGPVDCFMLDIQMPG 60
Query: 82 MDGFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKN 134
MDG +L +H+ D P++ML+A D + + GA DY+ KP I ELK+
Sbjct: 61 MDGIELAQHIRNSSRHADTPILMLTAMSDKRYIDGAFAAGATDYVTKPFEIAELKS 116
>gi|315649065|ref|ZP_07902158.1| integral membrane sensor hybrid histidine kinase [Paenibacillus
vortex V453]
gi|315275500|gb|EFU38855.1| integral membrane sensor hybrid histidine kinase [Paenibacillus
vortex V453]
Length = 888
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 66/114 (57%), Gaps = 5/114 (4%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
R+L VDDDP LKV+ L Y +TV QA AL++L + +DL+ISDV MP M
Sbjct: 555 FRLLVVDDDPVNLKVIRGLLSGEGYWITVVTQAEEALRLLEQ--AEWDLIISDVMMPQMS 612
Query: 84 GFKLLEHVG---LEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKN 134
G++L + + +LP+++L+A + + G GA DYL+KPV ELK
Sbjct: 613 GYELSRRIRQRYMLAELPILLLTARSQPEDIHMGFMSGANDYLIKPVDHLELKT 666
>gi|86609993|ref|YP_478755.1| DNA-binding response regulator [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86558535|gb|ABD03492.1| DNA-binding response regulator [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 246
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 71/118 (60%), Gaps = 2/118 (1%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
R+L VDD+ + ++LE L Y+V + AL++ ++ + DLV+ DV MP +DG
Sbjct: 8 RILVVDDEASIRRILETRLSMIGYDVVTASDGEEALEVF--HKQDPDLVVLDVMMPKLDG 65
Query: 85 FKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRR 142
+ + + + E D+P+IML+A GD + G+ GA DY++KP +EL+ + V+RR
Sbjct: 66 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 123
>gi|197116480|ref|YP_002136907.1| response receiver-modulated cyclic diguanylate phosphodiesterase
[Geobacter bemidjiensis Bem]
gi|197085840|gb|ACH37111.1| response receiver-modulated cyclic diguanylate phosphodiesterase
[Geobacter bemidjiensis Bem]
Length = 357
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 67/105 (63%), Gaps = 3/105 (2%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
RV+ VDDDP L+ + L +EVT + AL++LR R+ D+V++DV+MP M G
Sbjct: 8 RVVLVDDDPYVLESVALLLSVSGFEVTSFSNGHEALQLLR--RSPPDVVLTDVNMPQMSG 65
Query: 85 FKLLEHV-GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVR 128
+LLE + + D+PVI+++AY + ++ + I GA D+++KP +
Sbjct: 66 IELLEQIHDFDRDIPVILMTAYAELEMAVSAIKKGAFDFIIKPFK 110
>gi|340508704|gb|EGR34354.1| hypothetical protein IMG5_014920 [Ichthyophthirius multifiliis]
Length = 545
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 89/158 (56%), Gaps = 5/158 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVT-VTNQAVTALKMLRENRNNFDLVISDVHMPDM 82
+ VL +DD L + L C Y+VT V N + ++L+E+ +N D+V+ D+ MP+M
Sbjct: 11 IHVLVAEDDNFQRLALIDVLTLCNYQVTDVENGRLARDELLKED-SNIDVVLLDLWMPEM 69
Query: 83 DGFKLL---EHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHV 139
DG++LL ++ ++PVIM+SA + + V + HGA DYL+KP+RI+ +K I HV
Sbjct: 70 DGWELLCLMQNYEKLRNIPVIMMSADNEQEKVALCLAHGAKDYLVKPIRIQMVKGIANHV 129
Query: 140 IRRKKVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSD 177
I K+ K+ ++ +G G G + ++D
Sbjct: 130 ISSNKLKTNPGGKVTYKKIRTLGQGASGSVELVQRSND 167
>gi|345303921|ref|YP_004825823.1| two component, sigma54 specific, Fis family transcriptional
regulator [Rhodothermus marinus SG0.5JP17-172]
gi|345113154|gb|AEN73986.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Rhodothermus marinus SG0.5JP17-172]
Length = 476
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 78/138 (56%), Gaps = 4/138 (2%)
Query: 26 VLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDGF 85
+L VDD+ + E +T A+ AL++L++ + FDLVI+D MPDMDG
Sbjct: 14 ILLVDDEHLLHTLFERLFTRHGMRLTSCYNALQALEVLKKEADAFDLVITDFKMPDMDGL 73
Query: 86 KLLEHVGLEM-DLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKK 144
+LL ++ E DL VIM++A+ + + ++ + +GA DY+ KP EEL Q + R++
Sbjct: 74 ELLAYIRQEHPDLQVIMITAHANVQHAVRAMQNGAIDYIPKPFSTEELVERVQAALARRR 133
Query: 145 VGPKDQNKLLNQENSRVG 162
K Q ++ N+ +R+
Sbjct: 134 ---KQQEEVNNRTPARLA 148
>gi|359483278|ref|XP_002269813.2| PREDICTED: uncharacterized protein LOC100244458 [Vitis vinifera]
Length = 502
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 44/55 (80%), Gaps = 1/55 (1%)
Query: 212 KPRVVWTPELHRKFVGAVNQL-GVDKAVPKKILDLMNVEGLTRENVASHLQKFRL 265
KPR+ WTPELH +F+ AVN+L G +KA PK +L LMN+EGLT +V SHLQK+RL
Sbjct: 276 KPRMRWTPELHERFLEAVNKLEGAEKATPKGVLKLMNIEGLTIYHVKSHLQKYRL 330
>gi|405981294|ref|ZP_11039621.1| hypothetical protein HMPREF9240_00627 [Actinomyces neuii BVS029A5]
gi|404392218|gb|EJZ87278.1| hypothetical protein HMPREF9240_00627 [Actinomyces neuii BVS029A5]
Length = 239
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 76/132 (57%), Gaps = 7/132 (5%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
++L VDD+P +L + LR ++V + T L+ +E + DL++ DV MPDMDG
Sbjct: 15 KLLVVDDEPNIRDLLASSLRFAGFDVEIAADGATGLRAAKEYKP--DLIVLDVMMPDMDG 72
Query: 85 FKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIR 141
F + H+ GL+M PV+ L+A D + ++G+T G DY+ KP +EE+ + ++R
Sbjct: 73 FAVTRHLREAGLQM--PVLFLTARDDMQDKIQGLTVGGDDYVTKPFGLEEVVARIRAILR 130
Query: 142 RKKVGPKDQNKL 153
R K D+ K+
Sbjct: 131 RTKTTVADEPKM 142
>gi|297735683|emb|CBI18370.3| unnamed protein product [Vitis vinifera]
Length = 462
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 44/55 (80%), Gaps = 1/55 (1%)
Query: 212 KPRVVWTPELHRKFVGAVNQL-GVDKAVPKKILDLMNVEGLTRENVASHLQKFRL 265
KPR+ WTPELH +F+ AVN+L G +KA PK +L LMN+EGLT +V SHLQK+RL
Sbjct: 236 KPRMRWTPELHERFLEAVNKLEGAEKATPKGVLKLMNIEGLTIYHVKSHLQKYRL 290
>gi|387818191|ref|YP_005678536.1| two-component response regulator [Clostridium botulinum H04402 065]
gi|322806233|emb|CBZ03801.1| two-component response regulator [Clostridium botulinum H04402 065]
Length = 221
Score = 79.7 bits (195), Expect = 4e-12, Method: Composition-based stats.
Identities = 48/133 (36%), Positives = 71/133 (53%), Gaps = 3/133 (2%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
R+L V+DD ++ L+ Y V V + A++M R R NFDL+I DV +P +DG
Sbjct: 4 RILVVEDDFDIHTIISEVLKESGYLVEVATDGLIAVEMFR--RGNFDLIILDVMLPKIDG 61
Query: 85 FKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKK 144
F + E + E +P+IML+A G+ + MKG DY+ KP I L + V+RR
Sbjct: 62 FVVCEIIRKESSVPIIMLTALGEEEDEMKGFELKVDDYITKPFSISLLIKRVEAVLRRAN 121
Query: 145 VGPKDQNKLLNQE 157
G ++ N L E
Sbjct: 122 -GLEENNSTLTFE 133
>gi|226949267|ref|YP_002804358.1| DNA-binding response regulator [Clostridium botulinum A2 str.
Kyoto]
gi|226844404|gb|ACO87070.1| DNA-binding response regulator [Clostridium botulinum A2 str.
Kyoto]
Length = 221
Score = 79.7 bits (195), Expect = 4e-12, Method: Composition-based stats.
Identities = 48/133 (36%), Positives = 71/133 (53%), Gaps = 3/133 (2%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
R+L V+DD ++ L+ Y V V + A++M R R NFDL+I DV +P +DG
Sbjct: 4 RILVVEDDFDIHTIISEVLKESGYLVEVATDGLIAVEMFR--RGNFDLIILDVMLPKIDG 61
Query: 85 FKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKK 144
F + E + E +P+IML+A G+ + MKG DY+ KP I L + V+RR
Sbjct: 62 FVVCEIIRKESSVPIIMLTALGEEEDEMKGFELKVDDYITKPFSINLLIKRVEAVLRRAN 121
Query: 145 VGPKDQNKLLNQE 157
G ++ N L E
Sbjct: 122 -GLEENNSTLTFE 133
>gi|153941052|ref|YP_001391293.1| DNA-binding response regulator [Clostridium botulinum F str.
Langeland]
gi|384462308|ref|YP_005674903.1| DNA-binding response regulator [Clostridium botulinum F str.
230613]
gi|152936948|gb|ABS42446.1| DNA-binding response regulator [Clostridium botulinum F str.
Langeland]
gi|295319325|gb|ADF99702.1| DNA-binding response regulator [Clostridium botulinum F str.
230613]
Length = 221
Score = 79.7 bits (195), Expect = 4e-12, Method: Composition-based stats.
Identities = 48/133 (36%), Positives = 71/133 (53%), Gaps = 3/133 (2%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
R+L V+DD ++ L+ Y V V + A++M R R NFDL+I DV +P +DG
Sbjct: 4 RILVVEDDFDIHTIISEVLKESGYLVEVATDGLIAVEMFR--RGNFDLIILDVMLPKIDG 61
Query: 85 FKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKK 144
F + E + E +P+IML+A G+ + MKG DY+ KP I L + V+RR
Sbjct: 62 FVVCEIIRKESSVPIIMLTALGEEEDEMKGFELKVDDYITKPFSINLLIKRVEAVLRRAN 121
Query: 145 VGPKDQNKLLNQE 157
G ++ N L E
Sbjct: 122 -GLEENNSTLTFE 133
>gi|302873857|ref|YP_003842490.1| response regulator receiver sensor signal transduction histidine
kinase [Clostridium cellulovorans 743B]
gi|307689897|ref|ZP_07632343.1| response regulator receiver sensor signal transduction histidine
kinase [Clostridium cellulovorans 743B]
gi|302576714|gb|ADL50726.1| response regulator receiver sensor signal transduction histidine
kinase [Clostridium cellulovorans 743B]
Length = 366
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 69/112 (61%), Gaps = 5/112 (4%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+++L VDD P +K++ L+ Y + T AL+M++ R F+L++ DV MP+MD
Sbjct: 7 IKILVVDDTPFNIKIVSTILQEVGYNIYSTTSGREALEMVKNIR--FNLILLDVMMPEMD 64
Query: 84 GFKLLEHVGLE---MDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEEL 132
G++++ + + D+P+I L+A GD++ V++ GA DYL+KP +EL
Sbjct: 65 GYEVIRKLKNDEDTRDIPIIFLTARGDSESVVRAFDEGAYDYLIKPFNPKEL 116
>gi|449529136|ref|XP_004171557.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101203539
[Cucumis sativus]
Length = 311
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Query: 197 GDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLG-VDKAVPKKILDLMNVEGLTREN 255
G E+++S TQ+K R W+ ELHR+FV A+ QLG A PK+I +LM V+GLT +
Sbjct: 148 GGTAKREDKESQTQRKQRRCWSSELHRRFVHALQQLGGPHVATPKQIRELMKVDGLTNDE 207
Query: 256 VASHLQKFRLYLKRLSN 272
V SHLQK+RL+L+R +N
Sbjct: 208 VKSHLQKYRLHLRRPTN 224
>gi|428769497|ref|YP_007161287.1| LuxR family two component transcriptional regulator [Cyanobacterium
aponinum PCC 10605]
gi|428683776|gb|AFZ53243.1| two component transcriptional regulator, LuxR family
[Cyanobacterium aponinum PCC 10605]
Length = 212
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 69/112 (61%), Gaps = 7/112 (6%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
++L +DDDP + +++++L YEV N A+K+L ++ DL+I DV MP+MDG
Sbjct: 8 KLLLIDDDPNLILLVKDYLEFNGYEVITANHGREAIKILEQD--TPDLIICDVMMPEMDG 65
Query: 85 FKLLEHV----GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEEL 132
+ ++ + LE LPVI LSA G +K +KG+T GA Y++KP +EL
Sbjct: 66 YNFVQEIRQNPSLEW-LPVIFLSAKGQSKDRIKGLTQGADVYMVKPFEPDEL 116
>gi|242093734|ref|XP_002437357.1| hypothetical protein SORBIDRAFT_10g025490 [Sorghum bicolor]
gi|241915580|gb|EER88724.1| hypothetical protein SORBIDRAFT_10g025490 [Sorghum bicolor]
Length = 111
Score = 79.7 bits (195), Expect = 5e-12, Method: Composition-based stats.
Identities = 45/94 (47%), Positives = 60/94 (63%), Gaps = 6/94 (6%)
Query: 16 DIDKFPIGMRVLAVDDDPTCLKVLENFLRACQY-EVTVTNQAVTALKMLRENR---NNFD 71
D +F G+RVLAVD+D L VL+ L+ C Y VT+ TAL MLRE + + FD
Sbjct: 2 DAARFRAGLRVLAVDEDRVNLVVLKRVLKVCDYNNVTIVADVSTALDMLRERKDGDDQFD 61
Query: 72 LVISDVHMPD--MDGFKLLEHVGLEMDLPVIMLS 103
LVISD +P+ ++G K LE V +EMD+PVI +S
Sbjct: 62 LVISDFFIPNNGINGLKFLELVAVEMDIPVIGIS 95
>gi|310641768|ref|YP_003946526.1| alkaline phosphatase synthesis transcriptional regulatory
proteinphop [Paenibacillus polymyxa SC2]
gi|386040772|ref|YP_005959726.1| response regulator MprA [Paenibacillus polymyxa M1]
gi|309246718|gb|ADO56285.1| Alkaline phosphatase synthesis transcriptional regulatory
proteinphoP [Paenibacillus polymyxa SC2]
gi|343096810|emb|CCC85019.1| response regulator MprA [Paenibacillus polymyxa M1]
Length = 224
Score = 79.7 bits (195), Expect = 5e-12, Method: Composition-based stats.
Identities = 40/102 (39%), Positives = 63/102 (61%), Gaps = 2/102 (1%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
RVL VDDDP +++ +FLR EV + A+++ E + DL++ D+ MP MDG
Sbjct: 3 RVLVVDDDPHIRELVGHFLRLEGLEVVEAVDGLDAMRLFDETK--VDLLVLDIMMPGMDG 60
Query: 85 FKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKP 126
++L + + DLP++ML+A G+T ++KG G DYL+KP
Sbjct: 61 WELCRKLREQTDLPLLMLTAKGETSQIVKGFALGTDDYLVKP 102
>gi|224369327|ref|YP_002603491.1| sigma-54 dependent DNA-binding response regulator (NtrC-type
regulator) [Desulfobacterium autotrophicum HRM2]
gi|223692044|gb|ACN15327.1| sigma-54 dependent DNA-binding response regulator (NtrC-type
regulator) [Desulfobacterium autotrophicum HRM2]
Length = 450
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 60/103 (58%), Gaps = 3/103 (2%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
R+L VDDDP+ L+VL+ L A + V A TA+++L+E DL+ISD+ MP G
Sbjct: 6 RILIVDDDPSILEVLDARLTASDFSVVRAQDAATAIQILKE--QPIDLLISDIKMPRKSG 63
Query: 85 FKLLEHVGLEM-DLPVIMLSAYGDTKLVMKGITHGACDYLLKP 126
+L + + DLPVI L+AYG + I GA DY+ KP
Sbjct: 64 MELFAQIQKTLPDLPVIFLTAYGTIPDAVDAIRQGAVDYVSKP 106
>gi|398815822|ref|ZP_10574483.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Brevibacillus sp. BC25]
gi|398033759|gb|EJL27048.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Brevibacillus sp. BC25]
Length = 227
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 85/148 (57%), Gaps = 13/148 (8%)
Query: 23 GMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDM 82
G+++L VDD+PT L+ LE L ++V +TA+ M++E++ + +VI DV MP M
Sbjct: 6 GIKILLVDDEPTILQFLEMGLENEGFQVLTAQDGMTAVTMVKEHQPH--VVILDVMMPGM 63
Query: 83 DGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEEL--------KN 134
DGF++ + ++ IML+A D + +KG+T GA DY++KP EEL +N
Sbjct: 64 DGFEVCRMLKKIQNVATIMLTAREDVEDRVKGLTLGADDYMIKPFSFEELLARIHARIRN 123
Query: 135 IWQHVIRRKKVGP---KDQNKLLNQENS 159
+ H++ + +GP D+ K + E +
Sbjct: 124 HYPHLLSKVHLGPFQIDDRRKEITYEET 151
>gi|255524527|ref|ZP_05391482.1| two component transcriptional regulator, winged helix family
[Clostridium carboxidivorans P7]
gi|296186025|ref|ZP_06854430.1| subtilin biosynthesis regulatory protein SpaR [Clostridium
carboxidivorans P7]
gi|255511823|gb|EET88108.1| two component transcriptional regulator, winged helix family
[Clostridium carboxidivorans P7]
gi|296049293|gb|EFG88722.1| subtilin biosynthesis regulatory protein SpaR [Clostridium
carboxidivorans P7]
Length = 220
Score = 79.7 bits (195), Expect = 5e-12, Method: Composition-based stats.
Identities = 48/131 (36%), Positives = 75/131 (57%), Gaps = 6/131 (4%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEV-TVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
++LAVDDD LK+++N L +EV T+ N T ++ E +DL++ DV MP +D
Sbjct: 3 KILAVDDDKRILKLIKNALEINNHEVVTLQNAEDTPIEKFCE----YDLILLDVMMPGID 58
Query: 84 GFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRK 143
GFKL E + +D P+I L+A + ++KG+ G DY+ KP + EL + +RR+
Sbjct: 59 GFKLCEKIRNSVDSPIIFLTAKTEESAIVKGLALGGDDYISKPFGVMELNARVEAYLRRQ 118
Query: 144 KVGPKDQNKLL 154
G K KL+
Sbjct: 119 NRG-KSTRKLI 128
>gi|333899684|ref|YP_004473557.1| two component transcriptional regulator, winged helix family
[Pseudomonas fulva 12-X]
gi|333114949|gb|AEF21463.1| two component transcriptional regulator, winged helix family
[Pseudomonas fulva 12-X]
Length = 235
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 75/129 (58%), Gaps = 2/129 (1%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
R+LAV+DDP L++ L+ C ++VTV++ L++ +E +FDL++ D+ +P +G
Sbjct: 10 RILAVEDDPALASHLQSHLQGCGFDVTVSHDGGEGLRLAQEE--DFDLILMDILLPGSNG 67
Query: 85 FKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKK 144
+L+ + + +PVI++SA G + + G + GA DYL KP + EL + ++RR
Sbjct: 68 LDVLQRLRKQRHVPVILMSALGAEQDRIAGFSRGADDYLPKPFSLGELSVRIEAILRRVA 127
Query: 145 VGPKDQNKL 153
+ Q L
Sbjct: 128 YERRGQPPL 136
>gi|375011632|ref|YP_004988620.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Owenweeksia hongkongensis DSM
17368]
gi|359347556|gb|AEV31975.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Owenweeksia hongkongensis DSM
17368]
Length = 472
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 69/119 (57%), Gaps = 7/119 (5%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
++L VDDD T L +L++FL + + A L+ + EN FDL++SD MP +DG
Sbjct: 9 KILVVDDDTTFLLMLKSFLEKKGFIPHTESTAEKGLQAIEEN--TFDLILSDYRMPGIDG 66
Query: 85 ---FKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
K+L+ G+ P+I++++YGD KL + + GA DYL KPV EEL + VI
Sbjct: 67 IEMLKILKEKGITT--PLILITSYGDIKLAVNAMKLGASDYLTKPVNPEELLALVTSVI 123
>gi|187779416|ref|ZP_02995889.1| hypothetical protein CLOSPO_03012 [Clostridium sporogenes ATCC
15579]
gi|187773041|gb|EDU36843.1| response regulator receiver domain protein [Clostridium sporogenes
ATCC 15579]
Length = 221
Score = 79.7 bits (195), Expect = 5e-12, Method: Composition-based stats.
Identities = 48/133 (36%), Positives = 71/133 (53%), Gaps = 3/133 (2%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
R+L V+DD ++ L+ Y V V + A++M RE NFDL+I DV +P +DG
Sbjct: 4 RILVVEDDFDIHTIISEVLKESGYLVEVATDGLIAVEMFREG--NFDLIILDVMLPKIDG 61
Query: 85 FKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKK 144
F + E + E +P+IML+A G+ + MKG DY+ KP I L + V+RR
Sbjct: 62 FVVCEIIRKESSVPIIMLTALGEEEDEMKGFELKVDDYITKPFSINLLIKRVEAVLRRAN 121
Query: 145 VGPKDQNKLLNQE 157
G ++ N L E
Sbjct: 122 -GLEENNSTLTFE 133
>gi|146428|gb|AAA24004.1| hydG protein [Escherichia coli]
Length = 437
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 65/113 (57%), Gaps = 3/113 (2%)
Query: 26 VLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDGF 85
+L VDDD + +L+ LR Y V + N AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 86 KLLEHV-GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQ 137
L+ + L +PV++++AY + ++ + GA DYL+KP+ + L+ W+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATWK 118
>gi|332709113|ref|ZP_08429081.1| two component transcriptional regulator, winged helix family
[Moorea producens 3L]
gi|332352119|gb|EGJ31691.1| two component transcriptional regulator, winged helix family
[Moorea producens 3L]
Length = 242
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 70/123 (56%), Gaps = 3/123 (2%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
++L VDD+ + ++LE L YEV AL R+ DLV+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYEVVTAADGEEALNTFRDTEP--DLVVLDVMMPKLDG 64
Query: 85 FKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRR-K 143
+ + + + E D+P+IML+A GD + G+ GA DY++KP +EL+ + V+RR
Sbjct: 65 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRRFD 124
Query: 144 KVG 146
KVG
Sbjct: 125 KVG 127
>gi|327399108|ref|YP_004339977.1| putative two component sigma54 specific transcriptional regulator
[Hippea maritima DSM 10411]
gi|327181737|gb|AEA33918.1| putative two component, sigma54 specific, transcriptional regulator
[Hippea maritima DSM 10411]
Length = 386
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 68/117 (58%), Gaps = 3/117 (2%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
++L VDDD L+ L Y T+ A ALK+L+ +N FD ++SD+ MP MDG
Sbjct: 3 KILVVDDDEQMRVALKATLDHLGYNPTLAKDAKEALKLLK--KNEFDFILSDLKMPKMDG 60
Query: 85 FKLLEHV-GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
+ L+ V ++ +P +M++A+GD K ++ + GA D++LKP + LK I + I
Sbjct: 61 VEFLKEVKNIKPHIPFVMITAFGDIKTAVEAMKLGAFDFILKPFSQDALKKIIEMAI 117
>gi|413925155|gb|AFW65087.1| hypothetical protein ZEAMMB73_389889 [Zea mays]
Length = 319
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 56/89 (62%), Gaps = 3/89 (3%)
Query: 57 VTALKMLRENRNNFDLVISDVHMPDMDGFKLLEHVGLE---MDLPVIMLSAYGDTKLVMK 113
+ A ++RE FDLV+++V MP + G +LL + ++PV+M+S+ V+K
Sbjct: 1 MKAWGVMRERAYAFDLVLTEVAMPSLSGIQLLSRIVAADECKNIPVVMMSSQDSIGTVLK 60
Query: 114 GITHGACDYLLKPVRIEELKNIWQHVIRR 142
+ GA D+L+KPVR EL+N+WQHV RR
Sbjct: 61 CMQKGAVDFLVKPVRKNELRNLWQHVWRR 89
>gi|254432325|ref|ZP_05046028.1| DNA-binding response regulator [Cyanobium sp. PCC 7001]
gi|197626778|gb|EDY39337.1| DNA-binding response regulator [Cyanobium sp. PCC 7001]
Length = 253
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 71/117 (60%), Gaps = 2/117 (1%)
Query: 26 VLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDGF 85
+L VDD+ + ++LE L Y+V + + AL+ RE+ + DLV+ DV MP +DG+
Sbjct: 16 ILVVDDEASIRRILETRLSMIGYQVVTASDGMEALECFRES--HPDLVVLDVMMPKLDGY 73
Query: 86 KLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRR 142
+ + + E D+P++ML+A GD + G+ GA DY++KP +EL+ + V+RR
Sbjct: 74 GVCQELRKESDVPIVMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRCVLRR 130
>gi|147861344|emb|CAN83993.1| hypothetical protein VITISV_039545 [Vitis vinifera]
Length = 191
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 69/120 (57%), Gaps = 17/120 (14%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
RVL V++D + V+ LR C Y+VT T+ + A ++L++ N+ DLV+++V++P +
Sbjct: 59 RVLLVENDDSTRYVIGALLRNCGYQVTETSNGLQAWRILKDXSNHIDLVLTEVNLPRLS- 117
Query: 85 FKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKK 144
++S LV+K ++ GA D+L+KP R ELK +WQH+ RR++
Sbjct: 118 ----------------VMSTXDSGALVLKCLSKGATDFLVKPXRKNELKFLWQHIWRRRQ 161
>gi|355320020|emb|CBY88799.1| myb transcription factor [Humulus lupulus]
Length = 378
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 62/103 (60%), Gaps = 9/103 (8%)
Query: 197 GDDDGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLG-VDKAVPKKILDLMNVEGLTREN 255
G + E++D Q+K R W+PELH++F+ A+ QLG A PK+I +LM V+GLT +
Sbjct: 188 GSNKREEDKDGQNQRKQRRNWSPELHKRFLNALQQLGGSHAATPKQIRELMKVDGLTNDE 247
Query: 256 VASHLQKFRLYLKR----LSN----ETPQAGMVAALGSKDSSY 290
V SHLQK+RL+ +R + N +TPQ V + + S Y
Sbjct: 248 VKSHLQKYRLHTRRPNPAIHNNGNAQTPQVVFVGGIWMQPSEY 290
>gi|113474513|ref|YP_720574.1| adenylate/guanylate cyclase [Trichodesmium erythraeum IMS101]
gi|110165561|gb|ABG50101.1| adenylate/guanylate cyclase [Trichodesmium erythraeum IMS101]
Length = 1130
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 78/144 (54%), Gaps = 11/144 (7%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+L VDD+P ++VL N+L+A Y+VT AL L EN +NFDL++ D+ MP+M
Sbjct: 719 FHILVVDDEPINIQVLNNYLKANNYQVTQALSGKEALAAL-ENNHNFDLILLDIMMPNMT 777
Query: 84 GFKLLEHVGLEM---DLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
G+++ + + LPV+ML+A ++ G GA DYL KP +EL Q I
Sbjct: 778 GYEVCSQIREKYPAQSLPVLMLTAKNQIADLVMGFQFGANDYLTKPFAKDELLTRIQTHI 837
Query: 141 RRKKVG-------PKDQNKLLNQE 157
+ K+ P + +LL++E
Sbjct: 838 KLSKITKAYERFVPHEYVELLSKE 861
>gi|425856112|gb|AFX97564.1| PRR95, partial [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 72/128 (56%), Gaps = 6/128 (4%)
Query: 70 FDLVISDVHMPDMDGFKLL----EHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLK 125
DLV+++V +P M GF LL EH + ++PVIM+S+ +V K + GA D+L+K
Sbjct: 1 IDLVLTEVELPSMSGFLLLSTIMEHDACK-NIPVIMMSSNDAVSMVFKCMLKGAADFLVK 59
Query: 126 PVRIEELKNIWQHVIRRKKV-GPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNR 184
P+R EL+N+WQHV R++ G D ++ +EN G + + ++ + NR
Sbjct: 60 PIRKNELRNLWQHVWRKQLANGEIDVQQIQQEENVAEQHGRKTEATKAEHSTQNVVRKNR 119
Query: 185 KRKDQDGD 192
+ +Q+ D
Sbjct: 120 ECSEQESD 127
>gi|427707723|ref|YP_007050100.1| response regulator receiver sensor signal transduction histidine
kinase [Nostoc sp. PCC 7107]
gi|427360228|gb|AFY42950.1| response regulator receiver sensor signal transduction histidine
kinase [Nostoc sp. PCC 7107]
Length = 429
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 85/154 (55%), Gaps = 17/154 (11%)
Query: 18 DKFPIGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNF-DLVISD 76
D+ P G+ VL VDD+P L+VL +FL +EV AL+ L N +N DL++ D
Sbjct: 13 DRHPRGI-VLVVDDNPANLQVLSSFLDESNFEVWAVRSGEKALQKL--NSDNLPDLILLD 69
Query: 77 VHMPDMDGFKLLEHVG---LEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKP------- 126
V MP MDGF+ +H+ D+P+I ++A +T +KG+ GA DY+ KP
Sbjct: 70 VMMPGMDGFETCQHLKNDPRSEDIPIIFMTALSETDDKVKGLRLGAVDYITKPFQHEEVL 129
Query: 127 VRIE---ELKNIWQHVIRRKKVGPKDQNKLLNQE 157
VRIE +L+N+ + +I + K Q +L+ E
Sbjct: 130 VRIEHHLQLRNLTKTLIAQNTELQKTQTQLIQAE 163
>gi|425856110|gb|AFX97563.1| PRR95, partial [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 72/128 (56%), Gaps = 6/128 (4%)
Query: 70 FDLVISDVHMPDMDGFKLL----EHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLK 125
DLV+++V +P M GF LL EH + ++PVIM+S+ +V K + GA D+L+K
Sbjct: 1 IDLVLTEVELPSMSGFLLLSTIMEHDACK-NIPVIMMSSNDAVSMVFKCMLKGAADFLVK 59
Query: 126 PVRIEELKNIWQHVIRRKKV-GPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNR 184
P+R EL+N+WQHV R++ G D ++ +EN G + + ++ + NR
Sbjct: 60 PIRKNELRNLWQHVWRKQLANGEIDVQQIQQEENVAEQHGRKTEATKAEHSTQNVVRKNR 119
Query: 185 KRKDQDGD 192
+ +Q+ D
Sbjct: 120 ECSEQESD 127
>gi|75908099|ref|YP_322395.1| two component transcriptional regulator [Anabaena variabilis ATCC
29413]
gi|427709346|ref|YP_007051723.1| winged helix family two component transcriptional regulator [Nostoc
sp. PCC 7107]
gi|427715805|ref|YP_007063799.1| winged helix family two component transcriptional regulator
[Calothrix sp. PCC 7507]
gi|75701824|gb|ABA21500.1| two component transcriptional regulator, winged helix family
[Anabaena variabilis ATCC 29413]
gi|427348241|gb|AFY30965.1| two component transcriptional regulator, winged helix family
[Calothrix sp. PCC 7507]
gi|427361851|gb|AFY44573.1| two component transcriptional regulator, winged helix family
[Nostoc sp. PCC 7107]
Length = 242
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 70/118 (59%), Gaps = 2/118 (1%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
++L VDD+ + ++LE L Y+V AL+ R +++ DLV+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAGDGEEALETFR--KSDPDLVVLDVMMPKLDG 64
Query: 85 FKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRR 142
+ + + + E D+P+IML+A GD + G+ GA DY++KP +EL+ + V+RR
Sbjct: 65 YGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|56965768|ref|YP_177502.1| two-component response regulator [Bacillus clausii KSM-K16]
gi|56912014|dbj|BAD66541.1| two-component response regulator [Bacillus clausii KSM-K16]
Length = 226
Score = 79.3 bits (194), Expect = 6e-12, Method: Composition-based stats.
Identities = 45/117 (38%), Positives = 66/117 (56%), Gaps = 2/117 (1%)
Query: 26 VLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDGF 85
VL VDD+P L+++ +LR Y + ALK R ++ DLVI DV M MDGF
Sbjct: 6 VLVVDDEPELLELVVTYLRKESYRALTADNGADALK--RIEQDAVDLVILDVMMEGMDGF 63
Query: 86 KLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRR 142
+ E + + LPVIML+A G+ ++G+ GA DY++KP +EL + +RR
Sbjct: 64 HVCERIRQKHSLPVIMLTARGNEADKVRGLKTGADDYMVKPFSPKELMARVEAALRR 120
>gi|260892098|ref|YP_003238195.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Ammonifex degensii KC4]
gi|260864239|gb|ACX51345.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Ammonifex degensii KC4]
Length = 463
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 66/111 (59%), Gaps = 7/111 (6%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
RVL VDD+ + ++L++ L YEV +A AL+ L + N LV D+ MPD+DG
Sbjct: 3 RVLVVDDEESVCQMLKDLLETEGYEVVTALEAREALEKLDQEEVNAALV--DIRMPDIDG 60
Query: 85 ---FKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEEL 132
FKLL+ G PVI+++AYG T ++ + GA DY+LKP IEEL
Sbjct: 61 LAFFKLLKEKG--YTFPVILITAYGSTDTAIEAMKLGAFDYVLKPFNIEEL 109
>gi|220908588|ref|YP_002483899.1| response regulator receiver modulated diguanylate cyclase
[Cyanothece sp. PCC 7425]
gi|219865199|gb|ACL45538.1| response regulator receiver modulated diguanylate cyclase
[Cyanothece sp. PCC 7425]
Length = 337
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 89/179 (49%), Gaps = 21/179 (11%)
Query: 26 VLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDGF 85
VL VDD P L +L + L +EV V ++A++ L N DL++ DV MP +DGF
Sbjct: 11 VLIVDDSPASLGILSDLLETAGFEVWVARSGISAIEKL--NHALPDLILLDVMMPGLDGF 68
Query: 86 KLLEHVGLE---MDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEE-LKNIWQHV-I 140
+ + DLP+I +S+ DT +KG+ G DY+ KP + EE L I H+ +
Sbjct: 69 ETCRRIKANEQLQDLPIIFMSSLSDTVDKVKGLQLGGVDYITKPFQQEEVLARIRVHLKL 128
Query: 141 RRKKVGPKDQNKLLNQE-NSRVGAGEGGQGAMSTGNSDQN---------GKSNRKRKDQ 189
++ +++N L QE RV A Q A+ N + G SNR+R DQ
Sbjct: 129 KKLTRALEEKNLKLQQEIQERVAA----QTALKQANEELKKLVAIDGLTGISNRRRFDQ 183
>gi|392408183|ref|YP_006444791.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Anaerobaculum mobile DSM 13181]
gi|390621319|gb|AFM22466.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Anaerobaculum mobile DSM 13181]
Length = 228
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 72/122 (59%), Gaps = 7/122 (5%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
MRVL DDD + L+ L L + +Y V + + A+ L + FDLVI DV MP +D
Sbjct: 2 MRVLIADDDTSLLEQLREILASERYTVDTASNGIEAMDKLYDA--VFDLVILDVMMPHID 59
Query: 84 GFKLLEHV---GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
G LLE + G+ ++PV+ML+A GD + +KG+ GA DYL KP I+EL + ++
Sbjct: 60 GLSLLEQMRKGGI--NIPVLMLTAKGDVEDKVKGLNLGADDYLAKPFSIDELLARVRALL 117
Query: 141 RR 142
RR
Sbjct: 118 RR 119
>gi|255561663|ref|XP_002521841.1| conserved hypothetical protein [Ricinus communis]
gi|223538879|gb|EEF40477.1| conserved hypothetical protein [Ricinus communis]
Length = 408
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 54/79 (68%), Gaps = 1/79 (1%)
Query: 200 DGHENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDKAV-PKKILDLMNVEGLTRENVAS 258
+G ++ T +K R W+PELHR+FV A+ QLG +A PK+I +LM V+GLT + V S
Sbjct: 251 NGPQSPQQQTARKQRRCWSPELHRRFVSALQQLGGSQAATPKQIRELMQVDGLTNDEVKS 310
Query: 259 HLQKFRLYLKRLSNETPQA 277
HLQK+RL+ +R+ + T A
Sbjct: 311 HLQKYRLHTRRMPSATAAA 329
>gi|168179677|ref|ZP_02614341.1| DNA-binding response regulator [Clostridium botulinum NCTC 2916]
gi|182669403|gb|EDT81379.1| DNA-binding response regulator [Clostridium botulinum NCTC 2916]
Length = 221
Score = 79.3 bits (194), Expect = 7e-12, Method: Composition-based stats.
Identities = 47/133 (35%), Positives = 71/133 (53%), Gaps = 3/133 (2%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
R+L V+DD ++ L+ Y V V + A++M R R NFDL++ DV +P +DG
Sbjct: 4 RILVVEDDFDIHTIISEVLKESGYLVEVATDGLIAVEMFR--RGNFDLIVLDVMLPKIDG 61
Query: 85 FKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKK 144
F + E + E +P+IML+A G+ + MKG DY+ KP I L + V+RR
Sbjct: 62 FVVCEIIRKESSVPIIMLTALGEEEDEMKGFELKVDDYITKPFSINLLIKRVEAVLRRAN 121
Query: 145 VGPKDQNKLLNQE 157
G ++ N L E
Sbjct: 122 -GLEENNSTLTFE 133
>gi|375107110|ref|ZP_09753371.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Burkholderiales bacterium JOSHI_001]
gi|374667841|gb|EHR72626.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Burkholderiales bacterium JOSHI_001]
Length = 234
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 68/119 (57%), Gaps = 2/119 (1%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
R+L +DDD L +LR ++++T+ A +L + R +FD VI DV +P+MDG
Sbjct: 3 RILLIDDDEELAAPLAAYLR--RFDITLEAAARPSLGLARLAAEDFDAVILDVMLPEMDG 60
Query: 85 FKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRK 143
F++ + D+PV+ML+A GD + G+ GA DYL KP EL Q ++RR+
Sbjct: 61 FEVCRRIRHGSDIPVLMLTARGDVTDRVVGLELGADDYLPKPFEPRELAARLQTILRRR 119
>gi|363806724|ref|NP_001242015.1| uncharacterized protein LOC100813604 [Glycine max]
gi|255640213|gb|ACU20397.1| unknown [Glycine max]
Length = 383
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/59 (64%), Positives = 44/59 (74%), Gaps = 1/59 (1%)
Query: 207 STTQKKPRVVWTPELHRKFVGAVNQLG-VDKAVPKKILDLMNVEGLTRENVASHLQKFR 264
+ Q KPR+ WTPELH FV AVNQLG DKA PK +L+LM VEGLT +V SHLQK+R
Sbjct: 186 TAPQTKPRMRWTPELHEAFVEAVNQLGGSDKATPKGVLNLMKVEGLTIYHVKSHLQKYR 244
>gi|350566097|ref|ZP_08934797.1| DNA-binding response regulator [Peptoniphilus indolicus ATCC 29427]
gi|348663121|gb|EGY79734.1| DNA-binding response regulator [Peptoniphilus indolicus ATCC 29427]
Length = 232
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 66/117 (56%), Gaps = 1/117 (0%)
Query: 26 VLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDGF 85
++ +DDD +++ L Y V + N + K +R N NN L++ D+ +PD DGF
Sbjct: 4 IIIIDDDVVLCNLIKKCLSTDGYYVDIANNGLEGYKKIR-NSNNLCLILLDIMLPDFDGF 62
Query: 86 KLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRR 142
++LE + E +PV+ML+A D + G+ GA DYL KP I ELK + ++RR
Sbjct: 63 QVLEMIREEYTVPVLMLTAKSDDDSKIYGLKQGADDYLTKPFNINELKARVEAMVRR 119
>gi|443476767|ref|ZP_21066656.1| two component transcriptional regulator, winged helix family
[Pseudanabaena biceps PCC 7429]
gi|443018233|gb|ELS32521.1| two component transcriptional regulator, winged helix family
[Pseudanabaena biceps PCC 7429]
Length = 245
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 69/118 (58%), Gaps = 2/118 (1%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
++L VDD+ + ++LE L YEV A+++ + N DLV+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYEVVTAADGEEAIQVF--HTENPDLVVLDVMMPKLDG 64
Query: 85 FKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRR 142
+ + + + E D+P+IML+A GD + G+ GA DY++KP +EL+ + V+RR
Sbjct: 65 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|304569547|ref|NP_441728.2| OmpR subfamily protein [Synechocystis sp. PCC 6803]
gi|407961633|dbj|BAM54873.1| OmpR subfamily [Bacillus subtilis BEST7613]
Length = 243
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 68/118 (57%), Gaps = 2/118 (1%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
R+L VDD+ + ++LE L YEV A+ E+ + DLV+ DV MP +DG
Sbjct: 7 RILVVDDEASIRRILETRLSMIGYEVVTAADGEEAIATFHES--DPDLVVLDVMMPKLDG 64
Query: 85 FKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRR 142
+ + + + E D+P+IML+A GD + G+ GA DY++KP +EL+ + V+RR
Sbjct: 65 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|226315436|ref|YP_002775332.1| two-component hybrid sensor and regulator [Brevibacillus brevis
NBRC 100599]
gi|226098386|dbj|BAH46828.1| two-component hybrid sensor and regulator [Brevibacillus brevis
NBRC 100599]
Length = 1050
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 67/125 (53%), Gaps = 12/125 (9%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
R+L VDDDP L+VLE L +YEVT+ AL +L +DLVISD+ MP M G
Sbjct: 710 RLLIVDDDPVNLQVLEAILPPDEYEVTMVTSGKEALAIL--GTGEWDLVISDIMMPQMSG 767
Query: 85 FKLLEHVGLEM---DLPVIMLSAYGDTKLVMKGITHGACDYLLKPV-------RIEELKN 134
++L + +LPV++L+A K + G GA DY+ KP+ RIE L
Sbjct: 768 YELTRMIRERFTLTELPVLLLTARSQPKDIQSGFLAGANDYVTKPIEGMEIKSRIEALTT 827
Query: 135 IWQHV 139
I Q V
Sbjct: 828 IKQSV 832
>gi|51892179|ref|YP_074870.1| two-component response regulator [Symbiobacterium thermophilum IAM
14863]
gi|51855868|dbj|BAD40026.1| two-component response regulator [Symbiobacterium thermophilum IAM
14863]
Length = 234
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 69/118 (58%), Gaps = 2/118 (1%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
R+L VDDDP LK L+ L+ YEV + AL+M R+ + DL+I D+ +P MDG
Sbjct: 9 RILVVDDDPKILKALDQALQQEGYEVYRAEDGLQALEMARKVKP--DLMILDIMLPKMDG 66
Query: 85 FKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRR 142
F++L + +P ++LSA G+ + G GA DYL+KP R+ EL + ++RR
Sbjct: 67 FEVLAQLQSTGGVPTLILSARGEEMDKVVGFNVGADDYLVKPFRLSELLLRVRAILRR 124
>gi|56965748|ref|YP_177482.1| hypothetical protein ABC3990 [Bacillus clausii KSM-K16]
gi|56911994|dbj|BAD66521.1| conserved hypothetical protein [Bacillus clausii KSM-K16]
Length = 610
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 68/125 (54%), Gaps = 12/125 (9%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
R+L VDDDP L+VLE L Y+VT+ AL ML + +DLVISD MP + G
Sbjct: 282 RILMVDDDPAHLQVLEGILSPEDYDVTMVTSGKEALAML--DAQEWDLVISDTMMPQLSG 339
Query: 85 FKLLEHVGLE---MDLPVIMLSAYGDTKLVMKGITHGACDYLLKPV-------RIEELKN 134
++L + ++LPV++L++ +K + G GA DY+ KPV RIE L
Sbjct: 340 YELTRLIRKRFTLIELPVLLLTSRSQSKDIQTGFLAGANDYVTKPVKALELRARIEALTT 399
Query: 135 IWQHV 139
I Q V
Sbjct: 400 IKQMV 404
>gi|239617306|ref|YP_002940628.1| two component transcriptional regulator, winged helix family
[Kosmotoga olearia TBF 19.5.1]
gi|239506137|gb|ACR79624.1| two component transcriptional regulator, winged helix family
[Kosmotoga olearia TBF 19.5.1]
Length = 221
Score = 79.0 bits (193), Expect = 8e-12, Method: Composition-based stats.
Identities = 50/127 (39%), Positives = 73/127 (57%), Gaps = 6/127 (4%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNF-DLVISDVHMPDMD 83
+VL V+DDP K ++ L YEV AVT + L E D+V+ DV +P+M+
Sbjct: 4 KVLLVEDDPHIRKFIQLELEHEGYEVKT---AVTGPQALDELEKELPDVVLLDVMLPEMN 60
Query: 84 GFKLLEHV--GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIR 141
GF +LE + +LPVIML+A G+ + ++G+ GA DY++KP IEEL + V+R
Sbjct: 61 GFTVLERIREDFSTELPVIMLTARGELEDRVRGLKSGADDYIVKPFHIEELLARLEAVLR 120
Query: 142 RKKVGPK 148
RK K
Sbjct: 121 RKGYSEK 127
>gi|170758276|ref|YP_001787361.1| DNA-binding response regulator [Clostridium botulinum A3 str. Loch
Maree]
gi|169405265|gb|ACA53676.1| DNA-binding response regulator [Clostridium botulinum A3 str. Loch
Maree]
Length = 221
Score = 79.0 bits (193), Expect = 8e-12, Method: Composition-based stats.
Identities = 47/133 (35%), Positives = 71/133 (53%), Gaps = 3/133 (2%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
R+L V+DD ++ L+ Y V V + A++M R R FDL+I DV +P +DG
Sbjct: 4 RILVVEDDFDIHTIISEVLKESGYLVEVATDGLIAVEMFR--RGEFDLIILDVMLPKIDG 61
Query: 85 FKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKK 144
F + E + E +P+IML+A G+ + MKG DY++KP I L + V+RR
Sbjct: 62 FVVCEIIRKESSMPIIMLTALGEEEDEMKGFELKVDDYIIKPFSINLLIKRVEAVLRRAN 121
Query: 145 VGPKDQNKLLNQE 157
G ++ N L E
Sbjct: 122 -GLEENNSTLTFE 133
>gi|343505269|ref|ZP_08742847.1| transcriptional regulatory protein CpxR [Vibrio ichthyoenteri ATCC
700023]
gi|342808228|gb|EGU43390.1| transcriptional regulatory protein CpxR [Vibrio ichthyoenteri ATCC
700023]
Length = 252
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 75/136 (55%), Gaps = 4/136 (2%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
+ +L V+DD L L++ Y V+ AL +L+ FDL++ DV++P++D
Sbjct: 24 LSILLVEDDINLNHQLTALLQSEHYCVSNVECGAKALTLLK--MRQFDLILLDVNIPNID 81
Query: 84 GFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRK 143
GF LL++V PVIML+AYG + +KG+ +GA DY+ KP EE+K + V+RR
Sbjct: 82 GFGLLKYVRSHSRTPVIMLTAYGAEEHRIKGLRYGADDYISKPCNFEEVKLRIEAVLRRT 141
Query: 144 K--VGPKDQNKLLNQE 157
+ P L QE
Sbjct: 142 QQLAAPTSSRYLSYQE 157
>gi|2894611|emb|CAA17145.1| putative protein [Arabidopsis thaliana]
gi|7268554|emb|CAB78804.1| putative protein [Arabidopsis thaliana]
Length = 483
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 64/111 (57%), Gaps = 19/111 (17%)
Query: 177 DQNGKSNRKRKDQDGDEDEDGDD--DGHENEDST----------------TQKKPRVVWT 218
++ G S ++ + + GD + D D H+ ED T T +K +V WT
Sbjct: 244 EERGDSEKEEEGETGDLISEKTDSVDIHKKEDETKPINKSSGIKNVSGNKTSRK-KVDWT 302
Query: 219 PELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKFRLYLKR 269
PELH+KFV AV QLGVD+A+P +IL+LM V LTR NVASHLQ + L +
Sbjct: 303 PELHKKFVQAVEQLGVDQAIPSRILELMKVGTLTRHNVASHLQHRKNILPK 353
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 67/132 (50%), Gaps = 9/132 (6%)
Query: 18 DKFPIGMRVLAV------DDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFD 71
+ FP G++VL + D D + + L + Y VT AL + +N +F
Sbjct: 12 ENFPKGLKVLLLLNGCDSDGDGSSAAETRSELESMDYIVTTFTDETEALSAVVKNPESFH 71
Query: 72 LVISDVHM-PDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIE 130
+ I +V+M + + FK LE + LP IM+S MK I GA ++L KP+ E
Sbjct: 72 IAIVEVNMSAESESFKFLE--AAKDVLPTIMISTDHCITTTMKCIALGAVEFLQKPLSPE 129
Query: 131 ELKNIWQHVIRR 142
+LKNIWQHV+ +
Sbjct: 130 KLKNIWQHVVHK 141
>gi|374299128|ref|YP_005050767.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Desulfovibrio africanus str. Walvis Bay]
gi|332552064|gb|EGJ49108.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Desulfovibrio africanus str. Walvis Bay]
Length = 462
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 60/108 (55%), Gaps = 3/108 (2%)
Query: 26 VLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDGF 85
+L VDDD + L+VL+ L A Y A L++L R DLVISD+ MP M G
Sbjct: 12 ILVVDDDESILEVLDARLSAGGYATLSARSAEKGLELL--ERTPVDLVISDMRMPGMGGK 69
Query: 86 KLLEHVGLEM-DLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEEL 132
LLE V E +LPVIML+AYG + + GA DY+ KP EEL
Sbjct: 70 GLLEKVATERPNLPVIMLTAYGTIPDAVASVKTGAVDYMTKPFEGEEL 117
>gi|443322742|ref|ZP_21051758.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Gloeocapsa sp. PCC 73106]
gi|442787495|gb|ELR97212.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Gloeocapsa sp. PCC 73106]
Length = 244
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 68/118 (57%), Gaps = 2/118 (1%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
++L VDD+ + ++LE L YEV AL + E + DLV+ DV MP +DG
Sbjct: 9 KILVVDDEASIRRILETRLSMIGYEVVTAADGEEALAVFHET--HPDLVVLDVMMPKLDG 66
Query: 85 FKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRR 142
+ + + + E D+P+IML+A GD + G+ GA DY++KP +EL+ + V+RR
Sbjct: 67 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 124
>gi|428777674|ref|YP_007169461.1| winged helix family two component transcriptional regulator
[Halothece sp. PCC 7418]
gi|428691953|gb|AFZ45247.1| two component transcriptional regulator, winged helix family
[Halothece sp. PCC 7418]
Length = 245
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 68/118 (57%), Gaps = 2/118 (1%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
++L VDD+ + ++LE L Y+V A+ N N+ DLV+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAADGEEAIATF--NENHPDLVVLDVMMPKLDG 64
Query: 85 FKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRR 142
+ + + + E D+P+IML+A GD + G+ GA DY++KP +EL+ + V+RR
Sbjct: 65 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|87301814|ref|ZP_01084648.1| two-component response regulator [Synechococcus sp. WH 5701]
gi|87283382|gb|EAQ75337.1| two-component response regulator [Synechococcus sp. WH 5701]
Length = 248
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 73/122 (59%), Gaps = 2/122 (1%)
Query: 26 VLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDGF 85
+L VDD+ + ++L+ L Y+V + V AL+ R++ + DLV+ DV MP +DG+
Sbjct: 11 ILVVDDEASIRRILDTRLSMIGYQVVTASDGVEALEAFRQS--SPDLVVLDVMMPKLDGY 68
Query: 86 KLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKV 145
+ + + E D+P++ML+A GD + G+ GA DY++KP +EL+ + V+RR +
Sbjct: 69 GVCQELRKESDVPIVMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRCVLRRVEK 128
Query: 146 GP 147
P
Sbjct: 129 DP 130
>gi|451332912|ref|ZP_21903500.1| putative two-component system response regulator [Amycolatopsis
azurea DSM 43854]
gi|449424686|gb|EMD29979.1| putative two-component system response regulator [Amycolatopsis
azurea DSM 43854]
Length = 220
Score = 79.0 bits (193), Expect = 9e-12, Method: Composition-based stats.
Identities = 48/141 (34%), Positives = 76/141 (53%), Gaps = 4/141 (2%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
MR+L V+DD L L+A + V+ + AL RE D+++ D+ +PDMD
Sbjct: 1 MRLLLVEDDAGVADALSETLQARGHTVSHAIRGCDALHRHREA----DVILLDLGLPDMD 56
Query: 84 GFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRK 143
G +L V +PV++L+A GD + V++G+ GA DYL KPVR+ EL V+RR
Sbjct: 57 GLDVLRKVRQVSLVPVLVLTARGDERSVVRGLRLGADDYLTKPVRLAELLARVDAVVRRA 116
Query: 144 KVGPKDQNKLLNQENSRVGAG 164
+ Q+ ++ E+ + G
Sbjct: 117 AITAAPQDDVVRVEDVEIDLG 137
>gi|381151411|ref|ZP_09863280.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Methylomicrobium album BG8]
gi|380883383|gb|EIC29260.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Methylomicrobium album BG8]
Length = 450
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
R+L +DDDP + L LR Y VT Q AL+ + + FDLV+SDV MP M G
Sbjct: 7 RLLVIDDDPGVVDYLLEMLRQQGYSVTGCTQTGQALEAI--EKEPFDLVVSDVVMPGMRG 64
Query: 85 FKLLEHVGLEM-DLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEEL 132
+L+ + + + V++++A+G L ++ + GACD+L KP RIEEL
Sbjct: 65 LELMAAIHRKRPEQLVLLITAFGSIDLAIQSMRAGACDFLTKPFRIEEL 113
>gi|159466928|ref|XP_001691650.1| predicted protein [Chlamydomonas reinhardtii]
gi|158278996|gb|EDP04758.1| predicted protein [Chlamydomonas reinhardtii]
Length = 55
Score = 79.0 bits (193), Expect = 9e-12, Method: Composition-based stats.
Identities = 34/55 (61%), Positives = 46/55 (83%)
Query: 209 TQKKPRVVWTPELHRKFVGAVNQLGVDKAVPKKILDLMNVEGLTRENVASHLQKF 263
+ K+PR++WT ELH +F+ V+QLGV+ AVPK IL +M V+G+TRENVASHLQK+
Sbjct: 1 SSKRPRMLWTHELHLRFMHVVSQLGVETAVPKTILSMMGVDGMTRENVASHLQKW 55
>gi|414077097|ref|YP_006996415.1| two-component response regulator [Anabaena sp. 90]
gi|413970513|gb|AFW94602.1| two-component response regulator [Anabaena sp. 90]
Length = 242
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 69/118 (58%), Gaps = 2/118 (1%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
++L VDD+ + ++LE L Y+V AL++ R + DLV+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAGDGEEALEIFR--KAEPDLVVLDVMMPKLDG 64
Query: 85 FKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRR 142
+ + + + E D+P+IML+A GD + G+ GA DY++KP +EL+ + V+RR
Sbjct: 65 YGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|114569317|ref|YP_755997.1| two component transcriptional regulator [Maricaulis maris MCS10]
gi|114339779|gb|ABI65059.1| two component transcriptional regulator, winged helix family
[Maricaulis maris MCS10]
Length = 233
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 68/119 (57%), Gaps = 2/119 (1%)
Query: 26 VLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDGF 85
+L VDDD +L+ FL+ + V+ A AL L N FDL++ DV MP M+GF
Sbjct: 11 ILVVDDDDRIRNLLKRFLQERGFRVSTAPNAGKALSTL--NSLAFDLLVLDVMMPGMNGF 68
Query: 86 KLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKK 144
+L E V + P+++L+A GD + +KG++ GA DYL KP EEL ++RR +
Sbjct: 69 ELTEAVRKRGETPILLLTARGDAEDRIKGLSLGADDYLPKPFEPEELVLRINAILRRAR 127
>gi|398866407|ref|ZP_10621902.1| heavy metal response regulator [Pseudomonas sp. GM78]
gi|398240916|gb|EJN26582.1| heavy metal response regulator [Pseudomonas sp. GM78]
Length = 223
Score = 79.0 bits (193), Expect = 9e-12, Method: Composition-based stats.
Identities = 47/135 (34%), Positives = 74/135 (54%), Gaps = 5/135 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
M +L V+D+P L N L+ Y V++ V L + E+ +FD+++ DV MP MD
Sbjct: 1 MNILVVEDEPKAGNYLLNGLQELGYTVSLARDGVDGLHLALEH--DFDVIVLDVMMPKMD 58
Query: 84 GFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRK 143
G+++L + E D PV+ L+A D +KG+ GA DYL+KP EL + + RR
Sbjct: 59 GWEVLRRLRKEADTPVLFLTARDDIADRIKGLELGADDYLIKPFSFAELVARLRTLTRR- 117
Query: 144 KVGPKDQNKLLNQEN 158
GP + + L+ E+
Sbjct: 118 --GPTREEEQLHIED 130
>gi|440682389|ref|YP_007157184.1| two component transcriptional regulator, winged helix family
[Anabaena cylindrica PCC 7122]
gi|428679508|gb|AFZ58274.1| two component transcriptional regulator, winged helix family
[Anabaena cylindrica PCC 7122]
Length = 242
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 69/118 (58%), Gaps = 2/118 (1%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
++L VDD+ + ++LE L Y+V AL++ R + DLV+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAGDGEEALEIFR--KAEPDLVVLDVMMPKLDG 64
Query: 85 FKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRR 142
+ + + + E D+P+IML+A GD + G+ GA DY++KP +EL+ + V+RR
Sbjct: 65 YGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|187736215|ref|YP_001878327.1| two component transcriptional regulator, winged helix family
[Akkermansia muciniphila ATCC BAA-835]
gi|187426267|gb|ACD05546.1| two component transcriptional regulator, winged helix family
[Akkermansia muciniphila ATCC BAA-835]
Length = 234
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 72/129 (55%), Gaps = 3/129 (2%)
Query: 26 VLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDGF 85
+L +DD + L + L A YEV + + A+ +RE NFDL + DV MP DGF
Sbjct: 8 ILIAEDDDSIRHALTDVLTASGYEVLALEEGLAAIHAVRER--NFDLALLDVAMPGADGF 65
Query: 86 KLLEHVGLEMD-LPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKK 144
++L+ + E PVIML+A G+ + ++G+ GA DY++KP I EL + V+RR
Sbjct: 66 QVLQVMSEERPGTPVIMLTARGEEEDRVQGLKLGADDYIVKPFSIRELLARIEAVLRRSP 125
Query: 145 VGPKDQNKL 153
P+ ++
Sbjct: 126 ERPRQLREI 134
>gi|282898613|ref|ZP_06306601.1| Two component Transcriptional regulator, Winged helix family
[Cylindrospermopsis raciborskii CS-505]
gi|281196481|gb|EFA71390.1| Two component Transcriptional regulator, Winged helix family
[Cylindrospermopsis raciborskii CS-505]
Length = 242
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 69/118 (58%), Gaps = 2/118 (1%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
++L VDD+ + ++LE L Y+V AL+ R + + DLV+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAGDGEEALETFR--KADPDLVVLDVMMPKLDG 64
Query: 85 FKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRR 142
+ + + + E D+P+IML+A GD + G+ GA DY++KP +EL+ + V+RR
Sbjct: 65 YGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|119511035|ref|ZP_01630155.1| Two component Transcriptional regulator, Winged helix family
protein [Nodularia spumigena CCY9414]
gi|119464286|gb|EAW45203.1| Two component Transcriptional regulator, Winged helix family
protein [Nodularia spumigena CCY9414]
Length = 242
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 69/118 (58%), Gaps = 2/118 (1%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
++L VDD+ + ++LE L Y+V AL+ R ++ DLV+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAGDGEEALETFR--KSEPDLVVLDVMMPKLDG 64
Query: 85 FKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRR 142
+ + + + E D+P+IML+A GD + G+ GA DY++KP +EL+ + V+RR
Sbjct: 65 YGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|422302664|ref|ZP_16390025.1| putative transcriptional regulator ycf27 [Microcystis aeruginosa
PCC 9806]
gi|425442909|ref|ZP_18823143.1| putative transcriptional regulator ycf27 [Microcystis aeruginosa
PCC 9717]
gi|425472686|ref|ZP_18851527.1| putative transcriptional regulator ycf27 [Microcystis aeruginosa
PCC 9701]
gi|389715919|emb|CCH99776.1| putative transcriptional regulator ycf27 [Microcystis aeruginosa
PCC 9717]
gi|389788043|emb|CCI16590.1| putative transcriptional regulator ycf27 [Microcystis aeruginosa
PCC 9806]
gi|389881212|emb|CCI38224.1| putative transcriptional regulator ycf27 [Microcystis aeruginosa
PCC 9701]
Length = 242
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 67/118 (56%), Gaps = 2/118 (1%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
++L VDD+ + ++LE L YEV AL+ R DLV+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYEVVTAADGEEALETFRTAEP--DLVVLDVMMPKLDG 64
Query: 85 FKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRR 142
+ + + + E D+P+IML+A GD + G+ GA DY++KP +EL+ + V+RR
Sbjct: 65 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|261407193|ref|YP_003243434.1| winged helix family two component transcriptional regulator
[Paenibacillus sp. Y412MC10]
gi|261283656|gb|ACX65627.1| two component transcriptional regulator, winged helix family
[Paenibacillus sp. Y412MC10]
Length = 227
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 79/143 (55%), Gaps = 1/143 (0%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
M+ L V+DD T LE L+ +Y + + +A ++L E+ + F L + D+ +PD
Sbjct: 1 MKFLLVEDDKTIASGLEYSLQQERYSTVICHDVASAKQVLAEDIDQFALCLFDLQLPDGS 60
Query: 84 GFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRK 143
G++L + V D+PVI L+ D V+ G+ GA DY+ KP R+ EL + + V+RR
Sbjct: 61 GYELCKMVKERRDIPVIFLTVIDDEVNVVMGLDMGADDYITKPFRVRELLSRIKSVLRRY 120
Query: 144 KVGPKDQNKLLNQENSRVGAGEG 166
+ P N +++ ++ R+ EG
Sbjct: 121 Q-KPSQVNSIMDIDDIRINTLEG 142
>gi|170077600|ref|YP_001734238.1| two-component DNA binding response regulator [Synechococcus sp. PCC
7002]
gi|169885269|gb|ACA98982.1| Two-component DNA binding response regulator [Synechococcus sp. PCC
7002]
Length = 242
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 67/118 (56%), Gaps = 2/118 (1%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
R+L VDD+ + ++LE L YEV AL E + DLV+ DV MP +DG
Sbjct: 7 RILVVDDEASIRRILETRLSMIGYEVVTAADGEEALATFDEA--DPDLVVLDVMMPKLDG 64
Query: 85 FKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRR 142
+ + + + E D+P+IML+A GD + G+ GA DY++KP +EL+ + V+RR
Sbjct: 65 YGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|325108669|ref|YP_004269737.1| Fis family transcriptionel regulator [Planctomyces brasiliensis DSM
5305]
gi|324968937|gb|ADY59715.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Planctomyces brasiliensis DSM 5305]
Length = 462
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 74/133 (55%), Gaps = 5/133 (3%)
Query: 26 VLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDGF 85
+L VDDD L+ + ++LR Y A+ +RE F++VI DVH+PD DGF
Sbjct: 8 LLVVDDDKFILEAMADYLRKLGYRTETAATCGEAMDRMREF--PFEVVICDVHLPDQDGF 65
Query: 86 KLLEHVGLEM-DLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKK 144
+LLE E + VIML+ YG + ++ I GA DYL KPV +EL Q + ++K
Sbjct: 66 QLLEWASKEQPETSVIMLTGYGTIESAVEAIRIGAFDYLTKPVIDDELNLSIQRALGQRK 125
Query: 145 VGPKDQNKLLNQE 157
+ ++NK L ++
Sbjct: 126 I--VEENKSLRKQ 136
>gi|147807228|emb|CAN70741.1| hypothetical protein VITISV_022754 [Vitis vinifera]
Length = 165
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 70/120 (58%), Gaps = 17/120 (14%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
RVL V++D + V+ LR C Y+VT T+ + A ++L++ N+ DLV+++V++P +
Sbjct: 59 RVLLVENDDSTRYVIGALLRNCGYQVTETSNGLQAWRILKDASNHIDLVLTEVNLPRLS- 117
Query: 85 FKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKK 144
++S LV+K ++ GA D+L+KP+R ELK +WQH+ RR++
Sbjct: 118 ----------------VMSTDDSGALVLKCLSKGATDFLVKPIRKNELKFLWQHIWRRRQ 161
>gi|239623926|ref|ZP_04666957.1| response regulator saeR [Clostridiales bacterium 1_7_47_FAA]
gi|239521957|gb|EEQ61823.1| response regulator saeR [Clostridiales bacterium 1_7_47FAA]
Length = 226
Score = 78.6 bits (192), Expect = 1e-11, Method: Composition-based stats.
Identities = 49/137 (35%), Positives = 73/137 (53%), Gaps = 5/137 (3%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
R+LAVDD+P L+ +L A Y+V A AL++L R +D ++ DV +PDM+G
Sbjct: 6 RLLAVDDEPDILRTNRKYLEARGYQVDTAVCAADALELL--GRQGYDCILLDVLLPDMNG 63
Query: 85 FKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEEL-KNIWQHVIRRK 143
F+L E V P++ LS D +KG+ G DY+ KP ++EL ++ V R
Sbjct: 64 FELCEAVRSLTSAPILFLSCMDDEADKIKGLMAGGDDYITKPYSLKELAARVYAQVRRSS 123
Query: 144 KVG--PKDQNKLLNQEN 158
G QN+LL +N
Sbjct: 124 MKGFVIDHQNQLLRIDN 140
>gi|17231314|ref|NP_487862.1| two-component response regulator [Nostoc sp. PCC 7120]
gi|17132956|dbj|BAB75521.1| two-component response regulator [Nostoc sp. PCC 7120]
Length = 242
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 69/118 (58%), Gaps = 2/118 (1%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
++L VDD+ + ++LE L Y+V AL R +++ DLV+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAGDGEEALDTFR--KSDPDLVVLDVMMPKLDG 64
Query: 85 FKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRR 142
+ + + + E D+P+IML+A GD + G+ GA DY++KP +EL+ + V+RR
Sbjct: 65 YGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|428203515|ref|YP_007082104.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Pleurocapsa sp. PCC 7327]
gi|427980947|gb|AFY78547.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Pleurocapsa sp. PCC 7327]
Length = 246
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 70/118 (59%), Gaps = 2/118 (1%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
++L VDD+ + ++LE L Y+V AL++ ++ N DLV+ DV MP +DG
Sbjct: 11 KILVVDDEASIRRILETRLSMIGYDVVTAADGEEALEVF--HQTNPDLVVLDVMMPKLDG 68
Query: 85 FKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRR 142
+ + + + E D+P+IML+A GD + G+ GA DY++KP +EL+ + V+RR
Sbjct: 69 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 126
>gi|434406928|ref|YP_007149813.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Cylindrospermum stagnale PCC 7417]
gi|428261183|gb|AFZ27133.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Cylindrospermum stagnale PCC 7417]
Length = 242
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 68/118 (57%), Gaps = 2/118 (1%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
++L VDD+ + ++LE L Y+V AL+ R + DLV+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAGDGEEALETFR--KTEPDLVVLDVMMPKLDG 64
Query: 85 FKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRR 142
+ + + + E D+P+IML+A GD + G+ GA DY++KP +EL+ + V+RR
Sbjct: 65 YGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|153854191|ref|ZP_01995499.1| hypothetical protein DORLON_01490 [Dorea longicatena DSM 13814]
gi|149753240|gb|EDM63171.1| response regulator receiver domain protein [Dorea longicatena DSM
13814]
Length = 229
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 78/137 (56%), Gaps = 8/137 (5%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
RVL VDD+ +K + L Y+V ALK+ +EN +D+++ DV +P DG
Sbjct: 4 RVLVVDDEKLIVKGIRFSLEQDGYDVDCAYDGEEALKLAKEN--AYDIILLDVMLPKYDG 61
Query: 85 FKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKK 144
F++ + + D+P+IML+A GD + G+ +GA DY+ KP I E+K + ++RR
Sbjct: 62 FEVCQQIREYSDVPIIMLTAKGDDMDKILGLDYGADDYITKPFNILEVKARIKAIMRR-- 119
Query: 145 VGPKDQNKLLNQENSRV 161
V +D+ NQEN +V
Sbjct: 120 VSKRDK----NQENEKV 132
>gi|119486641|ref|ZP_01620691.1| Two component Transcriptional regulator, Winged helix family
protein [Lyngbya sp. PCC 8106]
gi|119456258|gb|EAW37390.1| Two component Transcriptional regulator, Winged helix family
protein [Lyngbya sp. PCC 8106]
Length = 243
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 68/118 (57%), Gaps = 2/118 (1%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
++L VDD+ + ++LE L Y+V AL+ R + DLV+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAADGEEALETFR--KTEPDLVVLDVMMPKLDG 64
Query: 85 FKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRR 142
+ + + + E D+P+IML+A GD + G+ GA DY++KP +EL+ + V+RR
Sbjct: 65 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|374603021|ref|ZP_09676006.1| DNA-binding response regulator [Paenibacillus dendritiformis C454]
gi|374391334|gb|EHQ62671.1| DNA-binding response regulator [Paenibacillus dendritiformis C454]
Length = 224
Score = 78.6 bits (192), Expect = 1e-11, Method: Composition-based stats.
Identities = 42/121 (34%), Positives = 69/121 (57%), Gaps = 2/121 (1%)
Query: 26 VLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDGF 85
+L VDDDP + + L+ + T + V AL+++ +R DLV+ D+ MP+MDG+
Sbjct: 4 ILVVDDDPHIREFVTVLLQKEGFRTTEASDGVEALRLMESDRA--DLVVLDIMMPNMDGW 61
Query: 86 KLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKV 145
+L + D+P++ML+A GDT +KG G DYL+KP EL + ++RR ++
Sbjct: 62 ELCRELKALHDIPLLMLTAKGDTSQKVKGFNLGTDDYLVKPFEPMELVVRVRALLRRYQI 121
Query: 146 G 146
Sbjct: 122 A 122
>gi|409993465|ref|ZP_11276605.1| two component transcriptional regulator [Arthrospira platensis str.
Paraca]
gi|291569758|dbj|BAI92030.1| two-component response regulator [Arthrospira platensis NIES-39]
gi|409935677|gb|EKN77201.1| two component transcriptional regulator [Arthrospira platensis str.
Paraca]
Length = 243
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 67/118 (56%), Gaps = 2/118 (1%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
R+L VDD+ + ++LE L Y+V AL+ R DLV+ DV MP +DG
Sbjct: 7 RILVVDDEASIRRILETRLSMIGYDVVTAADGEEALETFRLTEP--DLVVLDVMMPKLDG 64
Query: 85 FKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRR 142
+ + + + E D+P+IML+A GD + G+ GA DY++KP +EL+ + V+RR
Sbjct: 65 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|170755155|ref|YP_001781532.1| DNA-binding response regulator [Clostridium botulinum B1 str. Okra]
gi|429245695|ref|ZP_19209070.1| DNA-binding response regulator [Clostridium botulinum CFSAN001628]
gi|169120367|gb|ACA44203.1| DNA-binding response regulator [Clostridium botulinum B1 str. Okra]
gi|428757273|gb|EKX79770.1| DNA-binding response regulator [Clostridium botulinum CFSAN001628]
Length = 221
Score = 78.6 bits (192), Expect = 1e-11, Method: Composition-based stats.
Identities = 48/133 (36%), Positives = 71/133 (53%), Gaps = 3/133 (2%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
R+L V+DD ++ L+ Y V V + A++M R R NFDL+I DV +P +DG
Sbjct: 4 RILVVEDDFDIHTIISEVLKESGYLVEVATDGLIAVEMFR--RWNFDLIILDVMLPKIDG 61
Query: 85 FKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKK 144
F + E + E +P+IML+A G+ + MKG DY+ KP I L + V+RR
Sbjct: 62 FVVCEIIRKESSVPIIMLTALGEEEDEMKGFELKVDDYITKPFSINLLIKRVEAVLRRAN 121
Query: 145 VGPKDQNKLLNQE 157
G ++ N L E
Sbjct: 122 -GLEENNSTLTFE 133
>gi|308272553|emb|CBX29157.1| Acetoacetate metabolism regulatory protein atoC [uncultured
Desulfobacterium sp.]
Length = 445
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 83/151 (54%), Gaps = 12/151 (7%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
R+L +DDD +VL+ L QY+V + A AL ++ ++++L+ISD+ MP+ DG
Sbjct: 8 RILVIDDDLVACEVLQETLIRAQYDVDICTSAKEALG---KDLSSYNLLISDIRMPEADG 64
Query: 85 FKLLEHVGLEM-DLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRK 143
LL V + +LPVIM++AYG + M+ + GA DY+ KP E ++ + +K
Sbjct: 65 LNLLHQVQKQWPELPVIMVTAYGSLETTMESLRLGASDYISKPFSPEAIR-----LKVKK 119
Query: 144 KVGPKD--QNKLL-NQENSRVGAGEGGQGAM 171
+ KD Q +L+ N ENS G AM
Sbjct: 120 LLDVKDLQQKRLIGNPENSEEPQFVGSSAAM 150
>gi|186685833|ref|YP_001869029.1| two component transcriptional regulator [Nostoc punctiforme PCC
73102]
gi|186468285|gb|ACC84086.1| two component transcriptional regulator, winged helix family
[Nostoc punctiforme PCC 73102]
Length = 242
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 68/118 (57%), Gaps = 2/118 (1%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
++L VDD+ + ++LE L Y+V AL+ R + DLV+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAGDGEEALETFR--KTEPDLVVLDVMMPKLDG 64
Query: 85 FKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRR 142
+ + + + E D+P+IML+A GD + G+ GA DY++KP +EL+ + V+RR
Sbjct: 65 YGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|329930122|ref|ZP_08283741.1| putative sensory transduction protein RegX3 [Paenibacillus sp.
HGF5]
gi|328935381|gb|EGG31856.1| putative sensory transduction protein RegX3 [Paenibacillus sp.
HGF5]
Length = 242
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 80/145 (55%), Gaps = 1/145 (0%)
Query: 22 IGMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPD 81
+ M+ L V+DD T LE L+ +Y + + +A ++L E+ + F L + D+ +PD
Sbjct: 14 LDMKFLLVEDDKTIASGLEYSLQQERYSTIICHDVASAKQVLAEDIDQFALCLFDLQLPD 73
Query: 82 MDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIR 141
G++L + V D+PVI L+ D V+ G+ GA DY+ KP R+ EL + + V+R
Sbjct: 74 GSGYELCKMVKERRDIPVIFLTVIDDEVNVVMGLDMGADDYITKPFRVRELLSRIKSVLR 133
Query: 142 RKKVGPKDQNKLLNQENSRVGAGEG 166
R + P N +++ ++ R+ EG
Sbjct: 134 RYQ-KPSQVNSIMDIDDIRINTLEG 157
>gi|298248600|ref|ZP_06972405.1| multi-sensor signal transduction histidine kinase [Ktedonobacter
racemifer DSM 44963]
gi|297551259|gb|EFH85125.1| multi-sensor signal transduction histidine kinase [Ktedonobacter
racemifer DSM 44963]
Length = 1036
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 97/185 (52%), Gaps = 21/185 (11%)
Query: 25 RVLAVDDDPTCLKVLEN--FLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDM 82
R+L VDDD L+ L LR +V ++ A+ AL L+ +D+V+SD+ MP M
Sbjct: 32 RILLVDDDMAALQALSRTFMLRMSDVDVDTSSSALDALAQLQSR--EYDVVVSDIKMPMM 89
Query: 83 DGFKLLEHVGLEM-DLPVIMLSAYGDTKLVMKGITHGACDYLLKPV----------RIEE 131
DG +LL ++ M D+PV++++ +G+ +L M+ + GA DY LKP+ R +
Sbjct: 90 DGIQLLSNIHKRMPDIPVLLITGHGEHELAMQALQEGAYDYTLKPIDRDFFVAGVRRALQ 149
Query: 132 LKNIWQHVIRRKKVGPKDQNKLLNQ-----ENSRVGAGEGGQGAMSTGNSDQNGKSNRKR 186
+ +++ +++ K+ ++Q + Q EN RV A Q T + + N++R
Sbjct: 150 TRQLFR-LVQEKQQAIEEQKRTEQQLKESEENFRVLAEMVPQFVWVTRSDGRVDYCNQRR 208
Query: 187 KDQDG 191
+D G
Sbjct: 209 RDYIG 213
>gi|428212246|ref|YP_007085390.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Oscillatoria acuminata PCC 6304]
gi|428000627|gb|AFY81470.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Oscillatoria acuminata PCC 6304]
Length = 242
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 68/118 (57%), Gaps = 2/118 (1%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
++L VDD+ + ++LE L Y+V AL+ R N DLV+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAADGEEALETFRTE--NPDLVVLDVMMPKLDG 64
Query: 85 FKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRR 142
+ + + + E D+P+IML+A GD + G+ GA DY++KP +EL+ + V+RR
Sbjct: 65 YGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|302753288|ref|XP_002960068.1| hypothetical protein SELMODRAFT_402040 [Selaginella moellendorffii]
gi|300171007|gb|EFJ37607.1| hypothetical protein SELMODRAFT_402040 [Selaginella moellendorffii]
Length = 396
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 54/82 (65%), Gaps = 6/82 (7%)
Query: 210 QKKPRVVWTPELHRKFVGAVNQLGVDK-AVPKKILDLMNVEGLTRENVASHLQKFRLYLK 268
Q+K R W+PELHR+FV A+ QLG + A PK+I +LM V+GLT + V SHLQK+RL+ +
Sbjct: 226 QRKARRCWSPELHRRFVNALQQLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLHTR 285
Query: 269 RLSNETP-----QAGMVAALGS 285
R + P ++ V LGS
Sbjct: 286 RPATVAPGTAAQKSPQVVVLGS 307
>gi|149923176|ref|ZP_01911589.1| EAL domain/GGDEF domain protein [Plesiocystis pacifica SIR-1]
gi|149815950|gb|EDM75466.1| EAL domain/GGDEF domain protein [Plesiocystis pacifica SIR-1]
Length = 402
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 79/149 (53%), Gaps = 11/149 (7%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
RVL DD+P K LE L +E V + A + L E NFD++++D+ MPD+DG
Sbjct: 17 RVLVADDEPQLRKTLERALDFAGFEAVVVHDGKAAERALSET--NFDVILTDIGMPDLDG 74
Query: 85 FKLLEHV-GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRK 143
+LL V ++D+PVI+++ D + K + GA Y++KP R++E I + V +
Sbjct: 75 IELLRLVRAKDLDVPVILMTGNPDYESAAKAVELGAMKYVVKPFRVQE---IIEQVAEAE 131
Query: 144 KVG-----PKDQNKLLNQENSRVGAGEGG 167
K+ +D +LL + + + A G
Sbjct: 132 KMHRLARLERDGLRLLGHDRASLAADRAG 160
>gi|302804638|ref|XP_002984071.1| hypothetical protein SELMODRAFT_423260 [Selaginella moellendorffii]
gi|300148423|gb|EFJ15083.1| hypothetical protein SELMODRAFT_423260 [Selaginella moellendorffii]
Length = 396
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 54/82 (65%), Gaps = 6/82 (7%)
Query: 210 QKKPRVVWTPELHRKFVGAVNQLGVDK-AVPKKILDLMNVEGLTRENVASHLQKFRLYLK 268
Q+K R W+PELHR+FV A+ QLG + A PK+I +LM V+GLT + V SHLQK+RL+ +
Sbjct: 226 QRKARRCWSPELHRRFVNALQQLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLHTR 285
Query: 269 RLSNETP-----QAGMVAALGS 285
R + P ++ V LGS
Sbjct: 286 RPATVAPGTAAQKSPQVVVLGS 307
>gi|224122790|ref|XP_002330480.1| predicted protein [Populus trichocarpa]
gi|222871892|gb|EEF09023.1| predicted protein [Populus trichocarpa]
Length = 423
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 46/60 (76%), Gaps = 1/60 (1%)
Query: 207 STTQKKPRVVWTPELHRKFVGAVNQL-GVDKAVPKKILDLMNVEGLTRENVASHLQKFRL 265
S+T KPR+ WT ELH +F+ AVN+L G +KA PK +L LMNVEGLT +V SHLQK+RL
Sbjct: 197 SSTAHKPRMRWTTELHERFLDAVNKLDGAEKATPKGVLKLMNVEGLTIYHVKSHLQKYRL 256
>gi|440753439|ref|ZP_20932642.1| response regulator [Microcystis aeruginosa TAIHU98]
gi|443651756|ref|ZP_21130689.1| response regulator [Microcystis aeruginosa DIANCHI905]
gi|440177932|gb|ELP57205.1| response regulator [Microcystis aeruginosa TAIHU98]
gi|443334397|gb|ELS48909.1| response regulator [Microcystis aeruginosa DIANCHI905]
Length = 242
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 67/118 (56%), Gaps = 2/118 (1%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
++L VDD+ + ++LE L YEV AL+ R DLV+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYEVVTAADGEEALETFRTAEP--DLVVLDVMMPKLDG 64
Query: 85 FKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRR 142
+ + + + E D+P+IML+A GD + G+ GA DY++KP +EL+ + V+RR
Sbjct: 65 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|392978836|ref|YP_006477424.1| DNA-binding response regulator [Enterobacter cloacae subsp.
dissolvens SDM]
gi|392324769|gb|AFM59722.1| DNA-binding response regulator [Enterobacter cloacae subsp.
dissolvens SDM]
Length = 231
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 75/132 (56%), Gaps = 2/132 (1%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
RVL ++DD VLE +LR Y+VTVT + L+M R DLV+ DV +P ++G
Sbjct: 5 RVLIIEDDADAAGVLEAYLRRENYDVTVTGDGLAGLEM--AQRWKPDLVLLDVMLPGLNG 62
Query: 85 FKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKK 144
++L + + D+PVIM++A GDT + + +GA DY++KP E+ Q V+RR
Sbjct: 63 TEVLASLRRKSDVPVIMVTAMGDTPDRIGALRYGADDYVVKPYHPGEVVARVQAVLRRSN 122
Query: 145 VGPKDQNKLLNQ 156
+++ L Q
Sbjct: 123 KNTREEEILRWQ 134
>gi|428307458|ref|YP_007144283.1| winged helix family two component transcriptional regulator
[Crinalium epipsammum PCC 9333]
gi|428248993|gb|AFZ14773.1| two component transcriptional regulator, winged helix family
[Crinalium epipsammum PCC 9333]
Length = 241
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 85/170 (50%), Gaps = 21/170 (12%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
++L VDD+ + ++LE L Y+V AL+ R + DLV+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAADGEEALETFR--KAEPDLVVLDVMMPKLDG 64
Query: 85 FKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRR-K 143
+ + + + E D+P+IML+A GD + G+ GA DY++KP +EL+ + V+RR
Sbjct: 65 YGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRRVD 124
Query: 144 KVGPKDQNKLLNQENSRVGAGEGGQGAMSTGNSDQNGKSNRKRKDQDGDE 193
K+G G+G G + GN + KR+ GDE
Sbjct: 125 KIG---------------GSGIPSSGVILVGNIKID---TNKRQVYKGDE 156
>gi|354568271|ref|ZP_08987436.1| two component transcriptional regulator, winged helix family
[Fischerella sp. JSC-11]
gi|353540634|gb|EHC10107.1| two component transcriptional regulator, winged helix family
[Fischerella sp. JSC-11]
Length = 242
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 68/118 (57%), Gaps = 2/118 (1%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
++L VDD+ + ++LE L Y+V AL R + + DLV+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAGDGEEALDTFR--KTDPDLVVLDVMMPKLDG 64
Query: 85 FKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRR 142
+ + + + E D+P+IML+A GD + G+ GA DY++KP +EL+ + V+RR
Sbjct: 65 YGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|297737857|emb|CBI27058.3| unnamed protein product [Vitis vinifera]
Length = 356
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 61/108 (56%), Gaps = 9/108 (8%)
Query: 203 ENEDSTTQKKPRVVWTPELHRKFVGAVNQLGVDK-AVPKKILDLMNVEGLTRENVASHLQ 261
E ++ +Q+K R W+PELHR+F+ A+ QLG A PK+I +LM V+GLT + V SHLQ
Sbjct: 179 EEKEGQSQRKARRCWSPELHRRFLHALQQLGGSHVATPKQIRELMKVDGLTNDEVKSHLQ 238
Query: 262 KFRLYLKRLS-----NETPQAGMVAALGS---KDSSYLRIGALDGFGD 301
K+RL+ +R + N PQA +G Y + A G+
Sbjct: 239 KYRLHTRRPNPAIQHNGNPQAPQFVVVGGIWVPPPEYTAVAATTSSGE 286
>gi|398933668|ref|ZP_10665926.1| heavy metal response regulator [Pseudomonas sp. GM48]
gi|398160026|gb|EJM48310.1| heavy metal response regulator [Pseudomonas sp. GM48]
Length = 223
Score = 78.2 bits (191), Expect = 1e-11, Method: Composition-based stats.
Identities = 46/138 (33%), Positives = 77/138 (55%), Gaps = 5/138 (3%)
Query: 24 MRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMD 83
M +L V+D+P L N L+ Y V++ V L + E+ +FD+++ DV MP MD
Sbjct: 1 MNILVVEDEPKAGNYLLNGLQELGYTVSLARDGVDGLHLALEH--DFDVIVLDVMMPKMD 58
Query: 84 GFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRK 143
G+++L + E D PV+ L+A D +KG+ GA DYL+KP EL + + RR
Sbjct: 59 GWEVLRRLRKEADTPVLFLTARDDIADRIKGLELGADDYLIKPFSFAELVARLRTLTRR- 117
Query: 144 KVGPKDQNKLLNQENSRV 161
GP +++ L+ ++ ++
Sbjct: 118 --GPTREDEHLHVDDLQI 133
>gi|328951450|ref|YP_004368785.1| two component transcriptional regulator, winged helix family
[Marinithermus hydrothermalis DSM 14884]
gi|328451774|gb|AEB12675.1| two component transcriptional regulator, winged helix family
[Marinithermus hydrothermalis DSM 14884]
Length = 221
Score = 78.2 bits (191), Expect = 1e-11, Method: Composition-based stats.
Identities = 43/122 (35%), Positives = 69/122 (56%), Gaps = 2/122 (1%)
Query: 23 GMRVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDM 82
G R+L V+DDP ++L N L A Y + + AL L E F+LVI D+++PD+
Sbjct: 3 GERLLIVEDDPRLARLLVNELAAAGYAPSAVHTGSDALAKLEEEA--FELVILDLNLPDL 60
Query: 83 DGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRR 142
DG ++ V + D ++ML+A GD + ++G+ GA DY+ KP ++EL +R
Sbjct: 61 DGLEVAHRVAGQKDTSILMLTARGDVESRVQGLYAGASDYVTKPFSLKELLARVHARLRE 120
Query: 143 KK 144
+K
Sbjct: 121 RK 122
>gi|116626896|ref|YP_829052.1| Fis family transcriptional regulator [Candidatus Solibacter
usitatus Ellin6076]
gi|116230058|gb|ABJ88767.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Candidatus Solibacter usitatus Ellin6076]
Length = 457
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 81/141 (57%), Gaps = 8/141 (5%)
Query: 26 VLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDGF 85
+L VDDD L L R +E TV + A AL++++ FD+++SDV MP DG
Sbjct: 4 LLIVDDDANTLASLARAFRLAGHEATVCDNASRALELVKGQ--GFDMMLSDVVMPGKDGL 61
Query: 86 KLLEHV-GLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKK 144
LLE V GL + LPV+M+S + ++ ++ GA D+L KP+ ++L +V++ K+
Sbjct: 62 TLLEEVRGLGITLPVVMISGQANIEMAVRATRLGAIDFLEKPLSTDKLLLTVDNVLKLKR 121
Query: 145 VGPKDQNKLLNQENSRVGAGE 165
+ +D+N+ L Q RVG E
Sbjct: 122 L--EDENRELRQ---RVGKHE 137
>gi|357008882|ref|ZP_09073881.1| two component transcriptional regulator [Paenibacillus elgii B69]
Length = 224
Score = 78.2 bits (191), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/122 (33%), Positives = 69/122 (56%), Gaps = 2/122 (1%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
++L VDDDP ++++ +R +EV A++ L + DLVI D+ MP MDG
Sbjct: 3 KILVVDDDPHIRRLIKMIMRGEGFEVLEAADGAKAMRTLEAIKA--DLVILDIMMPGMDG 60
Query: 85 FKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKK 144
++L + DLP++ML+A GDT+ ++G G DYL+KP EL + +++R +
Sbjct: 61 WELCRELREHYDLPLLMLTALGDTEQKVRGFDLGTDDYLVKPFESRELVARVKALLKRYR 120
Query: 145 VG 146
+
Sbjct: 121 IA 122
>gi|254414140|ref|ZP_05027907.1| response regulator receiver domain protein [Coleofasciculus
chthonoplastes PCC 7420]
gi|196178815|gb|EDX73812.1| response regulator receiver domain protein [Coleofasciculus
chthonoplastes PCC 7420]
Length = 245
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 71/123 (57%), Gaps = 3/123 (2%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
++L VDD+ + ++LE L Y+V AL+ R + DLV+ DV MP +DG
Sbjct: 10 KILVVDDEASIRRILETRLSMIGYDVVTAADGEEALETFRTSEP--DLVVLDVMMPKLDG 67
Query: 85 FKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRR-K 143
+ + + + E D+P+IML+A GD + G+ GA DY++KP +EL+ + V+RR
Sbjct: 68 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRRVD 127
Query: 144 KVG 146
KVG
Sbjct: 128 KVG 130
>gi|406893623|gb|EKD38639.1| hypothetical protein ACD_75C00664G0001 [uncultured bacterium]
Length = 302
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 69/117 (58%), Gaps = 1/117 (0%)
Query: 25 RVLAVDDDPTCLKVLENFLRACQYEVTVTNQAVTALKMLRENRNNFDLVISDVHMPDMDG 84
R++ VDD+ +VL L Y V + ++ A+K RE+ DLV++D+ MPDM G
Sbjct: 178 RIMVVDDEAAVAEVLRISLEGVGYRVLTFHGSIAAVKKFREDPGCCDLVLTDMLMPDMTG 237
Query: 85 FKLL-EHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 140
+L E +GL LP+IML+ +GDT + + G ++L KPV+ E+L+ I + V+
Sbjct: 238 AELAREFLGLRPGLPIIMLTGHGDTFDLSRAKKIGIREFLQKPVKQEKLQQIVRRVL 294
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.313 0.129 0.368
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,660,134,265
Number of Sequences: 23463169
Number of extensions: 454658107
Number of successful extensions: 2399188
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 21420
Number of HSP's successfully gapped in prelim test: 81328
Number of HSP's that attempted gapping in prelim test: 2252890
Number of HSP's gapped (non-prelim): 128135
length of query: 681
length of database: 8,064,228,071
effective HSP length: 150
effective length of query: 531
effective length of database: 8,839,720,017
effective search space: 4693891329027
effective search space used: 4693891329027
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 81 (35.8 bits)