Query 005721
Match_columns 681
No_of_seqs 219 out of 853
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 05:35:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005721.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005721hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3kmv_A Alpha-L-arabinofuranosi 99.8 1.2E-19 4.1E-24 172.8 11.0 113 543-664 8-121 (157)
2 1wd3_A Alpha-L-arabinofuranosi 99.8 1.7E-20 5.8E-25 202.3 3.1 152 509-677 297-453 (482)
3 3kmv_A Alpha-L-arabinofuranosi 99.6 4.5E-16 1.5E-20 148.2 11.3 125 498-646 23-150 (157)
4 3akh_A Putative secreted alpha 99.2 5.1E-11 1.7E-15 132.9 10.4 125 535-669 312-437 (468)
5 1wd3_A Alpha-L-arabinofuranosi 99.1 2.2E-10 7.5E-15 124.1 11.0 149 476-644 324-481 (482)
6 3akh_A Putative secreted alpha 99.0 1.7E-09 5.8E-14 120.6 12.0 135 484-644 322-459 (468)
7 2gz6_A N-acetyl-D-glucosamine 98.6 1.8E-07 6.3E-12 100.8 13.5 263 2-277 66-355 (388)
8 2zzr_A Unsaturated glucuronyl 98.6 9.2E-07 3.2E-11 96.4 18.0 221 1-257 80-341 (397)
9 2ahf_A Unsaturated glucuronyl 98.6 8.8E-07 3E-11 96.0 16.7 222 1-257 54-316 (377)
10 3k7x_A LIN0763 protein; Q92DQ0 98.5 7.2E-07 2.5E-11 95.8 15.1 171 2-197 59-250 (349)
11 3k7x_A LIN0763 protein; Q92DQ0 98.5 1.6E-06 5.6E-11 93.1 16.7 180 51-255 43-242 (349)
12 3gt5_A N-acetylglucosamine 2-e 98.2 8.4E-06 2.9E-10 88.9 13.5 256 2-276 65-360 (402)
13 2gz6_A N-acetyl-D-glucosamine 98.2 4.9E-06 1.7E-10 89.6 11.2 210 60-273 58-284 (388)
14 3pmm_A Putative cytoplasmic pr 98.1 9.9E-06 3.4E-10 88.0 11.7 215 2-264 81-334 (382)
15 2zbl_A Putative isomerase; N-a 98.1 3.3E-05 1.1E-09 84.7 15.5 258 5-277 66-367 (421)
16 1nc5_A Hypothetical protein YT 98.0 1.1E-05 3.9E-10 87.0 9.6 215 2-261 54-313 (373)
17 1nc5_A Hypothetical protein YT 97.9 6.9E-05 2.3E-09 80.9 13.0 171 76-271 13-187 (373)
18 3gt5_A N-acetylglucosamine 2-e 97.9 7.2E-05 2.4E-09 81.5 12.9 185 2-193 125-344 (402)
19 3pmm_A Putative cytoplasmic pr 97.7 0.00047 1.6E-08 74.7 15.9 226 6-264 23-277 (382)
20 1fp3_A N-acyl-D-glucosamine 2- 97.7 0.00025 8.7E-09 76.7 13.3 257 5-276 75-364 (402)
21 2ahf_A Unsaturated glucuronyl 97.7 0.00035 1.2E-08 75.6 13.9 227 2-244 101-367 (377)
22 2zzr_A Unsaturated glucuronyl 97.5 0.00078 2.7E-08 73.3 14.0 230 2-244 127-392 (397)
23 3k11_A Putative glycosyl hydro 97.4 0.00042 1.4E-08 76.5 9.9 231 2-264 95-366 (445)
24 2zbl_A Putative isomerase; N-a 97.0 0.0019 6.5E-08 70.6 10.1 185 2-192 123-349 (421)
25 3h7l_A Endoglucanase; dehydrog 97.0 0.018 6.3E-07 65.4 18.0 253 8-279 190-497 (586)
26 1fp3_A N-acyl-D-glucosamine 2- 96.9 0.0025 8.6E-08 68.8 10.2 175 2-193 135-348 (402)
27 1nxc_A Mannosyl-oligosaccharid 96.8 0.01 3.4E-07 66.1 13.5 195 60-263 110-344 (478)
28 3k11_A Putative glycosyl hydro 96.4 0.023 8E-07 62.6 13.1 249 2-271 24-313 (445)
29 1dl2_A Class I alpha-1,2-manno 96.2 0.028 9.7E-07 62.9 12.8 221 9-255 71-344 (511)
30 1x9d_A Endoplasmic reticulum m 95.8 0.077 2.6E-06 59.7 13.6 186 60-254 174-391 (538)
31 2ri9_A Mannosyl-oligosaccharid 94.7 0.3 1E-05 54.2 14.0 187 60-255 92-323 (475)
32 3e6u_A LANC-like protein 1; al 94.7 0.11 3.6E-06 56.7 10.3 121 2-139 244-365 (411)
33 1nxc_A Mannosyl-oligosaccharid 94.5 0.042 1.5E-06 61.0 6.6 194 3-205 187-413 (478)
34 1x9d_A Endoplasmic reticulum m 94.0 0.14 4.8E-06 57.6 9.5 192 4-206 250-481 (538)
35 1hcu_A Alpha-1,2-mannosidase; 93.7 0.4 1.4E-05 53.5 12.5 187 60-255 105-336 (503)
36 2ri9_A Mannosyl-oligosaccharid 93.4 0.26 9E-06 54.7 10.2 192 4-205 177-415 (475)
37 3e6u_A LANC-like protein 1; al 93.2 0.13 4.4E-06 56.0 7.3 128 60-194 236-370 (411)
38 1ks8_A Endo-B-1,4-glucanase; c 93.1 2.8 9.7E-05 45.8 17.8 238 6-278 88-351 (433)
39 1ia6_A Cellulase CEL9M; cellul 92.4 4.9 0.00017 44.0 18.5 238 7-278 91-355 (441)
40 1dl2_A Class I alpha-1,2-manno 92.3 0.24 8.3E-06 55.4 8.0 190 4-201 188-434 (511)
41 1hcu_A Alpha-1,2-mannosidase; 91.5 0.51 1.7E-05 52.7 9.4 192 4-205 191-434 (503)
42 1g87_A Endocellulase 9G; endog 91.2 8.4 0.00029 44.0 19.3 172 7-192 90-290 (614)
43 2xfg_A Endoglucanase 1; hydrol 90.8 16 0.00054 40.3 20.5 244 7-278 111-388 (466)
44 1ut9_A Cellulose 1,4-beta-cell 90.3 11 0.00037 43.0 19.2 125 8-137 227-380 (609)
45 1tf4_A T. fusca endo/EXO-cellu 89.6 9 0.00031 43.7 17.7 176 6-192 89-292 (605)
46 2g0d_A Nisin biosynthesis prot 85.6 11 0.00036 40.3 14.5 69 168-257 288-356 (409)
47 2v8i_A Pectate lyase; periplas 84.9 1.5 5.2E-05 47.9 7.1 73 60-137 378-454 (543)
48 2g0d_A Nisin biosynthesis prot 82.9 4.9 0.00017 43.0 10.3 116 60-187 211-353 (409)
49 3gzk_A Cellulase; fold from GH 81.9 2.8 9.7E-05 47.1 8.2 127 8-138 188-333 (537)
50 2yug_A Protein FRG1; spliceoso 73.2 36 0.0012 31.6 11.9 92 494-609 34-127 (155)
51 2yik_A Endoglucanase; hydrolas 66.4 20 0.00067 40.9 10.0 129 7-138 151-306 (611)
52 1clc_A Endoglucanase CELD; EC: 66.0 12 0.00042 42.8 8.3 128 7-137 231-376 (639)
53 3h7l_A Endoglucanase; dehydrog 65.8 21 0.00073 40.4 10.0 137 61-200 309-494 (586)
54 2w87_A Esterase D, XYL-CBM35; 55.1 40 0.0014 30.5 8.2 38 360-398 40-78 (139)
55 2w3j_A Carbohydrate binding mo 47.7 67 0.0023 29.2 8.5 38 360-398 40-78 (145)
56 2kll_A Interleukin-33; beta-tr 42.7 1.9E+02 0.0066 26.1 14.7 113 480-609 20-134 (161)
57 2ila_A Interleukin-1 alpha; cy 38.9 17 0.00059 34.1 2.9 26 592-621 114-139 (155)
58 3gzk_A Cellulase; fold from GH 36.5 81 0.0028 35.2 8.5 75 168-254 252-332 (537)
59 2v8i_A Pectate lyase; periplas 35.8 46 0.0016 36.5 6.0 86 116-202 380-468 (543)
60 1ia6_A Cellulase CEL9M; cellul 35.6 52 0.0018 35.8 6.6 113 1-136 220-335 (441)
61 2nvh_A IL-1 beta, interleukin- 34.8 17 0.00059 33.9 2.2 28 592-621 108-135 (153)
62 2wry_A IL-1 beta, interleukin- 34.1 28 0.00097 32.8 3.6 36 581-621 111-146 (162)
63 1md6_A Interleukin 1 family, m 34.1 17 0.00057 34.1 2.0 27 593-621 107-133 (154)
64 1ks8_A Endo-B-1,4-glucanase; c 32.9 64 0.0022 35.0 6.8 67 69-136 266-333 (433)
65 2w47_A Lipolytic enzyme, G-D-S 32.6 1.4E+02 0.0046 26.8 8.0 37 360-397 41-78 (144)
66 1ilt_A Interleukin-1 receptor 30.2 19 0.00067 33.6 1.7 27 593-621 108-134 (152)
67 2gjh_A Designed protein; oblig 26.8 16 0.00054 27.6 0.4 19 403-422 29-47 (62)
68 1dm9_A Hypothetical 15.5 KD pr 26.5 78 0.0027 28.5 5.1 34 390-432 35-68 (133)
69 3ltq_A Interleukin-1 beta; lan 24.1 33 0.0011 32.6 2.1 28 592-621 126-153 (171)
70 1jlx_A Agglutinin, amaranthin, 23.6 1.3E+02 0.0045 31.0 6.5 33 575-609 91-124 (303)
71 3llp_A Fascin; beta-trefoil, a 23.0 2.3E+02 0.0079 31.3 9.0 52 552-609 225-276 (493)
72 2k6p_A Uncharacterized protein 21.5 72 0.0024 26.4 3.6 33 390-431 27-59 (92)
73 2vzp_A Aocbm35, EXO-beta-D-glu 20.7 3.7E+02 0.013 23.1 8.4 38 360-398 40-78 (127)
No 1
>3kmv_A Alpha-L-arabinofuranosidase B; protein:carboydrate interactions, carbohydrate-binding modul trefoil fold, CBM42, sugar binding protein; 1.80A {Clostridium thermocellum}
Probab=99.80 E-value=1.2e-19 Score=172.84 Aligned_cols=113 Identities=20% Similarity=0.313 Sum_probs=99.7
Q ss_pred CcccccCCCCCCCceEEeecCCcceEEecCCCCCCcceEEEeeccCCCC-CeEEEeecCCcceEEEEeeccCCCCcEEEE
Q 005721 543 GKSVMLEPFDSPGMLVIQHETDDELVVTDSFIAQGSSVFHLVAGLDGGD-RTVSLESETYKGCFVYTAVNLQSSESTKLG 621 (681)
Q Consensus 543 g~~v~lepfd~Pg~~v~~~~~~~~l~v~~~~~~~~~s~f~~vpgl~g~~-~~vsle~~~~pg~~~~~~~~~~~g~~~~~~ 621 (681)
++.|+||+++.|++||||.+.. ++++.++...+|++|++||||++.+ |+|||||.++||+|||+. |..|+|+
T Consensus 8 ~~~vsl~S~n~p~~ylRh~~~~--~~~~~~~~~~~datF~vvpGLa~~~~g~VSfES~n~Pg~yLRh~-----~~~l~L~ 80 (157)
T 3kmv_A 8 ITKAKFQSYNYPNMYIRHANFD--ARIDENVTPEMDSQWELVPGLANSGDGYVSIQSVNYPGYYLRHS-----NYDLSLE 80 (157)
T ss_dssp --CBEEEESSSTTCEEEEETTE--EEEESSCSSGGGGCEEEEECSSCCSTTEEEEEESSSTTEEEEEE-----TTEEEEE
T ss_pred CccEEEEecCCCCcEEEEeCCe--EEEccCCCCccCceEEEeCCcCCCCCCEEEEEECCCCCcEEEEe-----CCEEEEe
Confidence 4579999999999999999985 4456567778999999999998765 899999999999999985 9999999
Q ss_pred eccCCCccccccccceecccCCcccCCceEEEecCCCcchhcc
Q 005721 622 CISESTEAGFNNAASFVIEKGLSEYHPISFVAKGANRNFLLAP 664 (681)
Q Consensus 622 ~~~~~~~~~f~~~asf~~~~gl~~~~~~sf~a~g~~~~~l~~p 664 (681)
+ . ++++.|+++|+|...+||++...+||++...++.||..=
T Consensus 81 ~-~-~~s~~f~~dATF~~~~GLa~~~~vSfeS~n~Pg~yLrh~ 121 (157)
T 3kmv_A 81 K-N-DGTSLFAESATFKIVPGLADPSYISFQSYNFPTRYIRHY 121 (157)
T ss_dssp E-C-CSCHHHHHTTCEEEEECSSCTTSEEEEESSSTTEEEEEE
T ss_pred c-c-CCCCCccCCceEEEccCccCCCcEEEEEEcCCCeEEEEE
Confidence 6 3 667789999999999999999999999999999999763
No 2
>1wd3_A Alpha-L-arabinofuranosidase B; beta-sandwich, beta-trefoil, hydrolase; HET: NAG; 1.75A {Aspergillus kawachii} SCOP: b.29.1.21 b.42.8.1 PDB: 1wd4_A* 2d44_A* 2d43_A*
Probab=99.79 E-value=1.7e-20 Score=202.32 Aligned_cols=152 Identities=18% Similarity=0.200 Sum_probs=125.8
Q ss_pred ecCCCCCccccceEEEEEecCCCCCCcccccCCCCcccccCCCC--CCCceEEeecCCcceEEecC---CCCCCcceEEE
Q 005721 509 KFPKSGTDAALHATFRLILNDSSGSEFSSLNDFIGKSVMLEPFD--SPGMLVIQHETDDELVVTDS---FIAQGSSVFHL 583 (681)
Q Consensus 509 ~~p~~g~~~~~~~~~r~~~~~~~~~~~~~p~~~~g~~v~lepfd--~Pg~~v~~~~~~~~l~v~~~---~~~~~~s~f~~ 583 (681)
..|..+||.++||+||.+ ....++....|.-..+..|+||+.+ .|++||||.+...+|.++.+ +....+++|++
T Consensus 297 ~~Psd~Td~aVqAnivAa-~y~~~s~~s~pgLa~g~~VSLrs~s~n~PgrYLRH~~~~vrL~~V~s~sSa~~k~DATF~V 375 (482)
T 1wd3_A 297 GYPSDDTENSVQENIVAA-KYVVGSLVSGPSFTSGEVVSLRVTTPGYTTRYIAHTDTTVNTQVVDDDSSTTLKEEASWTV 375 (482)
T ss_dssp SCCCHHHHHHHHHHHHHH-CEEECCCCCSSCCCTTCEEEEEECSTTCTTEEEEEETTEEEEEECCTTSCHHHHHHTCEEE
T ss_pred cCCChHHHHHHhhceeee-eccCCccccCCccccCceEEEEECcCCCCCeEEEEcCCcEEEEecccCCCcccccceeEEE
Confidence 458789999999999955 2222224456666789999999988 99999999988555544322 22356899999
Q ss_pred eeccCCCCCeEEEeecCCcceEEEEeeccCCCCcEEEEeccCCCccccccccceecccCCcccCCceEEEecCCCcchhc
Q 005721 584 VAGLDGGDRTVSLESETYKGCFVYTAVNLQSSESTKLGCISESTEAGFNNAASFVIEKGLSEYHPISFVAKGANRNFLLA 663 (681)
Q Consensus 584 vpgl~g~~~~vsle~~~~pg~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~asf~~~~gl~~~~~~sf~a~g~~~~~l~~ 663 (681)
||||++ +++|||||.++||+|||+. +.+|+|+ +. ++++.|+++|+|.+.+||++++ +||++.+ .
T Consensus 376 VpGLAd-~g~VSFES~n~PG~YLRH~-----n~~LrL~-~~-DgS~~FrqDATF~~~~GL~~~g-vSFeS~n-------~ 439 (482)
T 1wd3_A 376 VTGLAN-SQCFSFESVDTPGSYIRHY-----NFELLLN-AN-DGTKQFHEDATFCPQAALNGEG-TSLRSWS-------Y 439 (482)
T ss_dssp EECSSC-TTSEEEEESSSTTEEEEEE-----TTEEEEE-EC-CCCHHHHHHTCEEEEECTTSSS-EEEEESS-------S
T ss_pred eccccC-CCeEEEEecCCCCceEEEe-----CCEEEEe-cC-CCCcccccCceeEeccCCCCCc-eeEEEEC-------C
Confidence 999998 7999999999999999986 8899999 54 6678899999999999999988 9999998 7
Q ss_pred ccccccccceEEEE
Q 005721 664 PLLSLRDESYTVYF 677 (681)
Q Consensus 664 pl~~~~~~~~~~~~ 677 (681)
|..-||++.|++|-
T Consensus 440 PgrYLRH~n~~Lyl 453 (482)
T 1wd3_A 440 PTRYFRHYENVLYA 453 (482)
T ss_dssp TTCEEEEETTEEEE
T ss_pred CCcEEEEeCCEEEE
Confidence 88888999999996
No 3
>3kmv_A Alpha-L-arabinofuranosidase B; protein:carboydrate interactions, carbohydrate-binding modul trefoil fold, CBM42, sugar binding protein; 1.80A {Clostridium thermocellum}
Probab=99.65 E-value=4.5e-16 Score=148.24 Aligned_cols=125 Identities=14% Similarity=0.214 Sum_probs=94.3
Q ss_pred EecCCCceEeeecCCCCCccccceEEEEEecCCCCCCcccccCCCCcccccCCCCCCCceEEeecCCcceEEecCCCC--
Q 005721 498 LTNSNQSITMEKFPKSGTDAALHATFRLILNDSSGSEFSSLNDFIGKSVMLEPFDSPGMLVIQHETDDELVVTDSFIA-- 575 (681)
Q Consensus 498 ~~~~~~~~~~~~~p~~g~~~~~~~~~r~~~~~~~~~~~~~p~~~~g~~v~lepfd~Pg~~v~~~~~~~~l~v~~~~~~-- 575 (681)
+...+..+.+.. +....-.|+||++.+-.++ .+-.|+||+.+.||+||+|.++ .|+|+....+
T Consensus 23 lRh~~~~~~~~~----~~~~~~datF~vvpGLa~~---------~~g~VSfES~n~Pg~yLRh~~~--~l~L~~~~~s~~ 87 (157)
T 3kmv_A 23 IRHANFDARIDE----NVTPEMDSQWELVPGLANS---------GDGYVSIQSVNYPGYYLRHSNY--DLSLEKNDGTSL 87 (157)
T ss_dssp EEEETTEEEEES----SCSSGGGGCEEEEECSSCC---------STTEEEEEESSSTTEEEEEETT--EEEEEECCSCHH
T ss_pred EEEeCCeEEEcc----CCCCccCceEEEeCCcCCC---------CCCEEEEEECCCCCcEEEEeCC--EEEEeccCCCCC
Confidence 344555666554 3445778999999553222 1136899999999999999988 5555544333
Q ss_pred -CCcceEEEeeccCCCCCeEEEeecCCcceEEEEeeccCCCCcEEEEeccCCCccccccccceecccCCccc
Q 005721 576 -QGSSVFHLVAGLDGGDRTVSLESETYKGCFVYTAVNLQSSESTKLGCISESTEAGFNNAASFVIEKGLSEY 646 (681)
Q Consensus 576 -~~~s~f~~vpgl~g~~~~vsle~~~~pg~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~asf~~~~gl~~~ 646 (681)
..|++|++||||++ +|.|||||.++||||||+. |..|+|+|. +++.|+++|+|.+.+|.-+-
T Consensus 88 f~~dATF~~~~GLa~-~~~vSfeS~n~Pg~yLrh~-----~~~l~l~~~---~t~~fr~dATF~~~~~~~~~ 150 (157)
T 3kmv_A 88 FAESATFKIVPGLAD-PSYISFQSYNFPTRYIRHY-----NYLLRLDEI---VTELDRQDATFKIISEDTQL 150 (157)
T ss_dssp HHHTTCEEEEECSSC-TTSEEEEESSSTTEEEEEE-----TTEEEEEEC---CSHHHHHHTCEEEEC-----
T ss_pred ccCCceEEEccCccC-CCcEEEEEEcCCCeEEEEE-----CCEEEEecC---CCchhccCCeEEEecCcchh
Confidence 57899999999998 6999999999999999996 899999973 67889999999999997653
No 4
>3akh_A Putative secreted alpha L-arabinofuranosidase II; five-bladed beta propeller, beta-trefoil, hydrolase; HET: AHR; 1.70A {Streptomyces avermitilis} PDB: 3akf_A* 3akg_A* 3aki_A*
Probab=99.17 E-value=5.1e-11 Score=132.94 Aligned_cols=125 Identities=22% Similarity=0.290 Sum_probs=105.8
Q ss_pred cccccCCCCcccccCCCCCCCceEEeecCCcceEEecCCCCCCcceEEEeeccCCCCCeEEEeecCCcceEEEEeeccCC
Q 005721 535 FSSLNDFIGKSVMLEPFDSPGMLVIQHETDDELVVTDSFIAQGSSVFHLVAGLDGGDRTVSLESETYKGCFVYTAVNLQS 614 (681)
Q Consensus 535 ~~~p~~~~g~~v~lepfd~Pg~~v~~~~~~~~l~v~~~~~~~~~s~f~~vpgl~g~~~~vsle~~~~pg~~~~~~~~~~~ 614 (681)
+..|...+.+.+++++.+.|+.+|+|.+. .|+++.+.....+++|++||||.+ .++|||||.++||.|||+.
T Consensus 312 ~~~~~~~g~~~~s~~s~~~pg~ylrh~~~--~v~l~~~~~~~~d~tf~~~~gl~~-~~~~s~~s~~ypg~~lr~~----- 383 (468)
T 3akh_A 312 FGIPVADGVTPVRFSSYNYPDRYIRHWDF--RARIEANVTNLADSQFRVVTGLAG-SGTISLESANYPGYYLRHK----- 383 (468)
T ss_dssp CCCCCCSEECCBCEEESSSTTCEEEEETT--EEEEESSCSSGGGGCEEEEECTTC-TTCEEEEESSSTTEEEEEE-----
T ss_pred eccccccCccccccccccccccEEEEecC--cEEEccCCCCcccceEEEccCCCC-CceEEEEEEeCCCeEEEEE-----
Confidence 44555566667899999999999999876 677776666678999999999987 5999999999999999986
Q ss_pred CCcEEEEeccCCCccccccccceecccCCccc-CCceEEEecCCCcchhccccccc
Q 005721 615 SESTKLGCISESTEAGFNNAASFVIEKGLSEY-HPISFVAKGANRNFLLAPLLSLR 669 (681)
Q Consensus 615 g~~~~~~~~~~~~~~~f~~~asf~~~~gl~~~-~~~sf~a~g~~~~~l~~pl~~~~ 669 (681)
+..|+|+ +. .+++.|+++|+|.+.+||++- ..+||+....+..||.+==++|+
T Consensus 384 ~~~~~~~-~~-~~~~~~~~~atf~~~~g~~~~~~~~s~~s~~~p~~~lr~~~~~l~ 437 (468)
T 3akh_A 384 NYEVWVE-KN-DGSSAFKNDASFSRRAGLADSADGIAFESYNYPGRYLRHYENLLR 437 (468)
T ss_dssp TTEEEEE-EC-CSCHHHHHHTCEEEEECSSCTTTCEEEEESSSTTEEEEEETTEEE
T ss_pred CCEEEEe-cC-CCCccccCCCcEEEecCcCCCcCcEEEEeecCCceEEEEeCCeEE
Confidence 7799999 44 666889999999999999997 89999999999999976544444
No 5
>1wd3_A Alpha-L-arabinofuranosidase B; beta-sandwich, beta-trefoil, hydrolase; HET: NAG; 1.75A {Aspergillus kawachii} SCOP: b.29.1.21 b.42.8.1 PDB: 1wd4_A* 2d44_A* 2d43_A*
Probab=99.10 E-value=2.2e-10 Score=124.07 Aligned_cols=149 Identities=17% Similarity=0.265 Sum_probs=109.9
Q ss_pred ccCCCCccceeeeeec-CCeeEEEecCCCceEeeecCCC-CCccccceEEEEEecCCCCCCcccccCCCCcccccCCCCC
Q 005721 476 IPASYNSQLITFTQEY-GNTKFVLTNSNQSITMEKFPKS-GTDAALHATFRLILNDSSGSEFSSLNDFIGKSVMLEPFDS 553 (681)
Q Consensus 476 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~-g~~~~~~~~~r~~~~~~~~~~~~~p~~~~g~~v~lepfd~ 553 (681)
.|.+.....++|+-.+ +.+.+.|.+.++.+.+++.... .+...-+|+|+++.+-.+ ...|+||..+.
T Consensus 324 ~pgLa~g~~VSLrs~s~n~PgrYLRH~~~~vrL~~V~s~sSa~~k~DATF~VVpGLAd-----------~g~VSFES~n~ 392 (482)
T 1wd3_A 324 GPSFTSGEVVSLRVTTPGYTTRYIAHTDTTVNTQVVDDDSSTTLKEEASWTVVTGLAN-----------SQCFSFESVDT 392 (482)
T ss_dssp SSCCCTTCEEEEEECSTTCTTEEEEEETTEEEEEECCTTSCHHHHHHTCEEEEECSSC-----------TTSEEEEESSS
T ss_pred CCccccCceEEEEECcCCCCCeEEEEcCCcEEEEecccCCCcccccceeEEEeccccC-----------CCeEEEEecCC
Confidence 4444456678886554 3444566678888887764322 334466899999865221 23689999999
Q ss_pred CCceEEeecCCcceEEecCCC---CCCcceEEEeeccCCCCCeEEEeecCCcceEEEEeeccCCCCcEEEEec----cCC
Q 005721 554 PGMLVIQHETDDELVVTDSFI---AQGSSVFHLVAGLDGGDRTVSLESETYKGCFVYTAVNLQSSESTKLGCI----SES 626 (681)
Q Consensus 554 Pg~~v~~~~~~~~l~v~~~~~---~~~~s~f~~vpgl~g~~~~vsle~~~~pg~~~~~~~~~~~g~~~~~~~~----~~~ 626 (681)
||.||||.++ +|+|++... -..|+.|++++||.+ +| |||||.+.||.|||+. +..|.|.-. ..+
T Consensus 393 PG~YLRH~n~--~LrL~~~DgS~~FrqDATF~~~~GL~~-~g-vSFeS~n~PgrYLRH~-----n~~Lyla~~gg~~~~d 463 (482)
T 1wd3_A 393 PGSYIRHYNF--ELLLNANDGTKQFHEDATFCPQAALNG-EG-TSLRSWSYPTRYFRHY-----ENVLYAASNGGVQTFD 463 (482)
T ss_dssp TTEEEEEETT--EEEEEECCCCHHHHHHTCEEEEECTTS-SS-EEEEESSSTTCEEEEE-----TTEEEEECSSCSSGGG
T ss_pred CCceEEEeCC--EEEEecCCCCcccccCceeEeccCCCC-Cc-eeEEEECCCCcEEEEe-----CCEEEEecCCCccccc
Confidence 9999999988 777765443 246899999999988 46 9999999999999986 778999521 113
Q ss_pred CccccccccceecccCCc
Q 005721 627 TEAGFNNAASFVIEKGLS 644 (681)
Q Consensus 627 ~~~~f~~~asf~~~~gl~ 644 (681)
+.+.|++++||++..|++
T Consensus 464 ~t~~f~~DaTF~v~~pwA 481 (482)
T 1wd3_A 464 SKTSFNNDVSFEIETAFA 481 (482)
T ss_dssp CSTTHHHHTCEEEEECTT
T ss_pred CcccccCCceEEeccCCC
Confidence 466799999999998876
No 6
>3akh_A Putative secreted alpha L-arabinofuranosidase II; five-bladed beta propeller, beta-trefoil, hydrolase; HET: AHR; 1.70A {Streptomyces avermitilis} PDB: 3akf_A* 3akg_A* 3aki_A*
Probab=98.97 E-value=1.7e-09 Score=120.60 Aligned_cols=135 Identities=18% Similarity=0.202 Sum_probs=97.6
Q ss_pred ceeeeeecCCeeEEEecCCCceEeeecCCCCCccccceEEEEEecCCCCCCcccccCCCCcccccCCCCCCCceEEeecC
Q 005721 484 LITFTQEYGNTKFVLTNSNQSITMEKFPKSGTDAALHATFRLILNDSSGSEFSSLNDFIGKSVMLEPFDSPGMLVIQHET 563 (681)
Q Consensus 484 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~g~~~~~~~~~r~~~~~~~~~~~~~p~~~~g~~v~lepfd~Pg~~v~~~~~ 563 (681)
++++....-...|. .+.++.|.++.- ++ ....++||++.+-. +...++||..+.||.||||++.
T Consensus 322 ~~s~~s~~~pg~yl-rh~~~~v~l~~~---~~-~~~d~tf~~~~gl~-----------~~~~~s~~s~~ypg~~lr~~~~ 385 (468)
T 3akh_A 322 PVRFSSYNYPDRYI-RHWDFRARIEAN---VT-NLADSQFRVVTGLA-----------GSGTISLESANYPGYYLRHKNY 385 (468)
T ss_dssp CBCEEESSSTTCEE-EEETTEEEEESS---CS-SGGGGCEEEEECTT-----------CTTCEEEEESSSTTEEEEEETT
T ss_pred ccccccccccccEE-EEecCcEEEccC---CC-CcccceEEEccCCC-----------CCceEEEEEEeCCCeEEEEECC
Confidence 34444333223454 356677887752 22 36899999884411 1234789999999999999987
Q ss_pred CcceEEecCCC---CCCcceEEEeeccCCCCCeEEEeecCCcceEEEEeeccCCCCcEEEEeccCCCccccccccceecc
Q 005721 564 DDELVVTDSFI---AQGSSVFHLVAGLDGGDRTVSLESETYKGCFVYTAVNLQSSESTKLGCISESTEAGFNNAASFVIE 640 (681)
Q Consensus 564 ~~~l~v~~~~~---~~~~s~f~~vpgl~g~~~~vsle~~~~pg~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~asf~~~ 640 (681)
.|+|++... -.+++.|++||||++..+.|||||.+.||.|||+. +..|+|+ +. +++.|+++|+|...
T Consensus 386 --~~~~~~~~~~~~~~~~atf~~~~g~~~~~~~~s~~s~~~p~~~lr~~-----~~~l~~~-~~--~~~~~~~~atf~~~ 455 (468)
T 3akh_A 386 --EVWVEKNDGSSAFKNDASFSRRAGLADSADGIAFESYNYPGRYLRHY-----ENLLRIQ-PV--STALDRQDATFYAE 455 (468)
T ss_dssp --EEEEEECCSCHHHHHHTCEEEEECSSCTTTCEEEEESSSTTEEEEEE-----TTEEEEE-EC--CSHHHHHHTCEEEC
T ss_pred --EEEEecCCCCccccCCCcEEEecCcCCCcCcEEEEeecCCceEEEEe-----CCeEEEc-cC--CCchhcccceeeec
Confidence 666654332 23689999999998844899999999999999986 7789999 43 35679999999998
Q ss_pred cCCc
Q 005721 641 KGLS 644 (681)
Q Consensus 641 ~gl~ 644 (681)
.++.
T Consensus 456 ~~~~ 459 (468)
T 3akh_A 456 KLAA 459 (468)
T ss_dssp C---
T ss_pred cchh
Confidence 8864
No 7
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=98.63 E-value=1.8e-07 Score=100.79 Aligned_cols=263 Identities=10% Similarity=-0.055 Sum_probs=143.1
Q ss_pred ccc-CCchHHHHHHHHHHHHHHHh-hhhCCCceeeccCCchhhhhhccCCCcccccchHHHHHHHHHHHHHcCCHHHHHH
Q 005721 2 WAS-THNESLKEKMSAVVSALSAC-QKEIGSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQYTYADNAEALRM 79 (681)
Q Consensus 2 ya~-t~D~~L~~k~~~~V~~l~~~-Q~~~~dGYl~~~~~~~~~~~~~~~~~W~pyy~~HkI~aGLld~y~~tG~~~aL~v 79 (681)
|.. |+|+++++.+++.++.|.+. +.. ..|+..+.... .+. +.. -...|..=.+..||+.+|++||++++|+.
T Consensus 66 ~~~~~~~~~~~~~A~~~~~~l~~~~~~~-~Gg~~~~~d~d--g~~--~~~-~~~~~~~af~i~al~~~y~~tg~~~~l~~ 139 (388)
T 2gz6_A 66 CNQLEKRENWLKIARNGAKFLAQHGRDD-EGNWYFALTRG--GEP--LVQ-PYNIFSDCFAAMAFSQYALASGEEWAKDV 139 (388)
T ss_dssp HHHTCCCHHHHHHHHHHHHHHHHHSBCT-TSCBCSEECTT--SCB--CCC-CCCHHHHHHHHHHHHHHHHHHCCHHHHHH
T ss_pred HHHhcCCHHHHHHHHHHHHHHHHhcCCC-CCCEEEEEcCC--CCc--ccC-CcchHHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 445 79999999999999999998 441 23555443210 000 000 01112222356788899999999999999
Q ss_pred HHHHHHHHHHHhhhhhhccccc--cccccccc-c-ccchHHHHHHHHHhcCCHHHHHHHhhccc---cccchhhhh----
Q 005721 80 TTWMVEYFYNRVQNVIKKYSIE--RHWQTLNE-E-AGGMNDVLYKLFCITQDPKHLMLAHLFDK---PCFLGLLAL---- 148 (681)
Q Consensus 80 a~~~ad~~~~~~~~~~~~~~~~--~~~~~l~~-E-~GGmne~L~~LY~~TGd~~yL~lA~~f~~---~~~~~~l~~---- 148 (681)
|.++++++.+++... .+.-.. ..+..... + ..-+.++|.+||++|||++|++.|+.+.+ ..|.++...
T Consensus 140 A~~~~~~i~~~~~d~-~g~~~~~~~~~~~~~~~~~~~~~~~all~l~~~t~d~~~~~~A~~~~~~~~~~~~~~~~g~~~e 218 (388)
T 2gz6_A 140 AMQAYNNVLRRKDNP-KGKYTKTYPGTRPMKALAVPMILANLTLEMEWLLPQETLENVLAATVQEVMGDFLDQEQGLMYE 218 (388)
T ss_dssp HHHHHHHHHTC---------------CCCCEETHHHHHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHHTTEETTTTEECS
T ss_pred HHHHHHHHHHHhcCC-CcccCcccCCCCCCCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhccCCCeEEE
Confidence 999999998765321 011000 00111000 0 00123678999999999999998876522 112211100
Q ss_pred --cCC--CCCCCcccCcccc--ch---HHHHHHHHhCChHHHHHHHHHHHHhhccceee-ecCCCCCCCC-CCCcccccC
Q 005721 149 --QAD--DISGFHSNTHIPI--VI---GSQMRYEVTGDQLHKTISMFFMDIVNSSHTYA-TGGTSVGEFW-SDPKRLASN 217 (681)
Q Consensus 149 --~~D--~l~g~HanthiP~--~~---G~a~~Y~~TGd~~y~~aa~~f~d~v~~~h~y~-tGG~s~~E~f-~~p~~l~~~ 217 (681)
..| .+.....+...|- ++ -..+.+++|||+.|+++|+..++.+.++-.-. +||+-..-.+ +.| ...
T Consensus 219 ~~~~~w~~~~~~~~~~~~pgh~~e~a~lL~~~~~~tgd~~~~~~A~~~~~~~~~~g~d~~~Gg~~~~~~~~g~~---~~~ 295 (388)
T 2gz6_A 219 NVAPDGSHIDCFEGRLINPGHGIEAMWFIMDIARRKNDSKTINQAVDVVLNILNFAWDNEYGGLYYFMDAAGHP---PQQ 295 (388)
T ss_dssp EECTTSCCCCSTTTTEECHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHBCTTTCSBCSCEETTSCC---CSC
T ss_pred EECCCCCCCCCcccCcCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhccCCCCCEEEeecCCCCc---ccc
Confidence 000 0000000111121 11 13445789999999999988888775422111 2443211001 100 000
Q ss_pred CCCCcccchhhHHHHHHHHHHhcccCCchhHHHHHHHH---hhhcccccCCCCCCeEEEecCC
Q 005721 218 LDSNTEESCTTYNMLKVSRHLFRWTKEIAYADYYERSL---TNGVLGIQRGTEPGVMIYLLPL 277 (681)
Q Consensus 218 l~~~~~EtCas~nmlkl~~~Lf~~tgd~~YaD~~Eral---yN~ila~q~~~~~g~~~Y~~pl 277 (681)
+.....-.+...+++.-+-.+++.|||.+|.+.++++. +++++ ++..++.+.+.++-
T Consensus 296 ~~~~~~~~W~qae~i~a~~~ly~~tgd~~yl~~a~~~~~~~~~~~~---D~~~G~w~~~l~~~ 355 (388)
T 2gz6_A 296 LEWDQKLWWVHLESLVALAMGYRLTGRDACWAWYQKMHDYSWQHFA---DPEYGEWFGYLNRR 355 (388)
T ss_dssp TTTTCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHB---CTTTSSBCCEECTT
T ss_pred CcCCCcCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCc---CCCCCceEEeeCCC
Confidence 11133345666778888888999999999999998864 33433 33344555566543
No 8
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=98.60 E-value=9.2e-07 Score=96.40 Aligned_cols=221 Identities=11% Similarity=0.106 Sum_probs=129.0
Q ss_pred CcccCCchHHHHHHHHHHHHHHHhhhhCCCceeeccCCchhhhhhccCCCcccccchHHHHHHHHHHHHHcCCHHHHHHH
Q 005721 1 MWASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQYTYADNAEALRMT 80 (681)
Q Consensus 1 mya~t~D~~L~~k~~~~V~~l~~~Q~~~~dGYl~~~~~~~~~~~~~~~~~W~pyy~~HkI~aGLld~y~~tG~~~aL~va 80 (681)
+|..|+|+++++.+..+.+.|.+.-.+ . +.+ +.|- .+=.++..+...|+.|||+++++++
T Consensus 80 ~ye~Tgd~~~~~~a~~~~~~l~~~~~~--~--~~~-------------~~HD---~GF~~~~s~~~~y~ltg~~~~~~~~ 139 (397)
T 2zzr_A 80 AYEYNQDKKLKNIAHKNVLSFLNRINN--R--IAL-------------DHHD---LGFLYTPSCTAEYRINGDVKALEAT 139 (397)
T ss_dssp HHHHHCCHHHHHHHHHHHHHHHHHHHT--T--CSC-------------CSST---HHHHHTTTHHHHHHHHCCHHHHHHH
T ss_pred HHHHHCCHHHHHHHHHHHHHHHHhhhh--c--ccC-------------CCCC---chHHHHHHHHHHHHHhCCHHHHHHH
Confidence 377899999999999999888764331 0 000 0000 0001223344689999999999999
Q ss_pred HHHHHHHHHHhhhhhhcccccccccc----------ccccccchH-HHHHHHHHhcCCHHHHHHHhhc-c---cccc---
Q 005721 81 TWMVEYFYNRVQNVIKKYSIERHWQT----------LNEEAGGMN-DVLYKLFCITQDPKHLMLAHLF-D---KPCF--- 142 (681)
Q Consensus 81 ~~~ad~~~~~~~~~~~~~~~~~~~~~----------l~~E~GGmn-e~L~~LY~~TGd~~yL~lA~~f-~---~~~~--- 142 (681)
...|+++.+|+.+.. ..-++|.. +.+- || ..|++.+++|||++|++.|..- + +.-+
T Consensus 140 ~~aA~~L~~r~~~~~---g~iqsw~~~~~~~~~~~iID~~---mni~~L~~A~~~~gd~~y~~~A~~ha~~~l~~~~r~d 213 (397)
T 2zzr_A 140 IKAADKLMERYQEKG---GFIQAWGELGYKEHYRLIIDCL---LNIQLLFFAYEQTGDEKYRQVAVNHFYASANNVVRDD 213 (397)
T ss_dssp HHHHHHHHTTEETTT---TEECCSSSTTCGGGCEEETTHH---HHTHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTBCTT
T ss_pred HHHHHHHHHHhCcCC---CEEEecccCCCCCCCceeechH---hHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCcCCC
Confidence 999999999885421 11133431 1111 44 6899999999999999999741 1 1111
Q ss_pred --------chhhhhc---CCCCCCCcccC-----ccccchHHHHHHHHhCChHHHHHHHHHHHHhhccceeeecCCCCCC
Q 005721 143 --------LGLLALQ---ADDISGFHSNT-----HIPIVIGSQMRYEVTGDQLHKTISMFFMDIVNSSHTYATGGTSVGE 206 (681)
Q Consensus 143 --------~~~l~~~---~D~l~g~Hant-----hiP~~~G~a~~Y~~TGd~~y~~aa~~f~d~v~~~h~y~tGG~s~~E 206 (681)
+++.... .....|.+-.. +-=.+.|.+..|+.|+|++|++.|+..-+.+.+ |. .-.|+.
T Consensus 214 gs~~h~~~~d~~~G~~~~~~t~qGy~dds~WaRGqAw~i~gl~~lY~~T~d~~yL~~A~~la~~~l~-~~-~~d~~p--- 288 (397)
T 2zzr_A 214 SSAFHTFYFDPETGEPLKGVTRQGYSDESSWARGQAWGIYGIPLSYRKMKDYQQIILFKGMTNYFLN-RL-PEDKVS--- 288 (397)
T ss_dssp SCBCSEEEECTTTCCEEEEECTTSSSTTSCBHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH-TC-CTTSCC---
T ss_pred CCeEEEEEeeCCCCCcccCCcccccCcchhhHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH-hh-HHhCCc---
Confidence 1111000 00011111000 011357889999999999999999998888775 33 221211
Q ss_pred CC--CCCcccccCCCCCcccchhhHHHHHHHHHHhcccCC---ch--hHHHHHHHHhh
Q 005721 207 FW--SDPKRLASNLDSNTEESCTTYNMLKVSRHLFRWTKE---IA--YADYYERSLTN 257 (681)
Q Consensus 207 ~f--~~p~~l~~~l~~~~~EtCas~nmlkl~~~Lf~~tgd---~~--YaD~~EralyN 257 (681)
+| ..|. ++....+..+-.+++.++++++ +++++ .+ |.+..|+++-.
T Consensus 289 ywdt~~~~-~~~~~~D~Sa~aiaA~~Ll~L~----~~~~~~~~~~~~Y~~~A~~~l~~ 341 (397)
T 2zzr_A 289 YWDLIFTD-GSGQPRDTSATATAVCGIHEML----KYLPEVDPDKETYKYAMHTMLRS 341 (397)
T ss_dssp BSBTTCCT-TSCCCBCHHHHHHHHHHHHHHH----TTSCTTCTTHHHHHHHHHHHHHH
T ss_pred cccCCCCC-CCCCcCCCCHHHHHHHHHHHHH----HhcCccchhhHHHHHHHHHHHHH
Confidence 22 2221 2211112233344456666544 45565 77 99999988844
No 9
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A
Probab=98.57 E-value=8.8e-07 Score=96.03 Aligned_cols=222 Identities=12% Similarity=0.096 Sum_probs=130.3
Q ss_pred CcccCCchHHHHHHHHHHHHHHHhhhhCCCceeeccCCchhhhhhccCCCcccccchHHHHHHHHHHHHHcCCHHHHHHH
Q 005721 1 MWASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQYTYADNAEALRMT 80 (681)
Q Consensus 1 mya~t~D~~L~~k~~~~V~~l~~~Q~~~~dGYl~~~~~~~~~~~~~~~~~W~pyy~~HkI~aGLld~y~~tG~~~aL~va 80 (681)
+|..|+|+++++.+..+.+.|.+.-.+.- ..- +.+ .+=+++..+...|+.|||+++++++
T Consensus 54 ~ye~Tgd~~~~~~a~~~~~~l~~~~~~~~----~~~-----------~HD-----~Gf~~~~s~~~~y~ltg~~~~~~~~ 113 (377)
T 2ahf_A 54 CYEYTGDEQYREGAVRTVASFRERLDRFE----NLD-----------HHN-----IGFLYSLSAKAQWIVEKDESARKLA 113 (377)
T ss_dssp HHHHHCCHHHHHHHHHHHHHHHHHHTTTT----TCC-----------BST-----HHHHHHTTHHHHHHHHCCHHHHHHH
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHhhhccc----CCC-----------CCC-----chHhhHHHHHHHHHHhCCHHHHHHH
Confidence 36789999999999999888875422000 000 001 1111234556789999999999999
Q ss_pred HHHHHHHHHHhhhhhhcccccccccc-----------ccccccchH-HHHHHHHHhcCCHHHHHHHhhc---ccccc---
Q 005721 81 TWMVEYFYNRVQNVIKKYSIERHWQT-----------LNEEAGGMN-DVLYKLFCITQDPKHLMLAHLF---DKPCF--- 142 (681)
Q Consensus 81 ~~~ad~~~~~~~~~~~~~~~~~~~~~-----------l~~E~GGmn-e~L~~LY~~TGd~~yL~lA~~f---~~~~~--- 142 (681)
...|+++..|+.+.. ..-++|.. +.+- || ..|++.+++|||++|++.|..- .-...
T Consensus 114 ~~aA~~L~~r~~~~~---g~i~sw~~~~~~~~~~~~iID~m---mni~~L~~A~~~~gd~~y~~~A~~~a~~~l~~~~r~ 187 (377)
T 2ahf_A 114 LDAADVLMRRWRADA---GIIQAWGPKGDPENGGRIIIDCL---LNLPLLLWAGEQTGDPEYRRVAEAHALKSRRFLVRG 187 (377)
T ss_dssp HHHHHHHHTTEETTT---TEECCBSSTTCTTTTTEEEGGGG---GGHHHHHHHHHHHCCTHHHHHHHHHHHHHHHHTBBT
T ss_pred HHHHHHHHHhCCCCC---CeEEeccCCCCCCCCceEEechH---HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCcCC
Confidence 999999999886321 11133321 2222 33 6899999999999999999761 11111
Q ss_pred ---------chhhhhcC---CCCCCCcccC-----ccccchHHHHHHHHhCChHHHHHHHHHHHHhhccceeeecCCCCC
Q 005721 143 ---------LGLLALQA---DDISGFHSNT-----HIPIVIGSQMRYEVTGDQLHKTISMFFMDIVNSSHTYATGGTSVG 205 (681)
Q Consensus 143 ---------~~~l~~~~---D~l~g~Hant-----hiP~~~G~a~~Y~~TGd~~y~~aa~~f~d~v~~~h~y~tGG~s~~ 205 (681)
+++..... ....|.+-.. +-=.+.|.+..|++|+|++|++.|+..-+.+.++ . .-.|+.
T Consensus 188 dgs~~h~~~~D~~tG~~~~~~t~qG~~dds~WaRGqAw~i~gl~~ly~~T~d~~yL~~A~~la~~~l~~-~-~~d~~p-- 263 (377)
T 2ahf_A 188 DDSSYHTFYFDPENGNAIRGGTHQGNTDGSTWTRGQAWGIYGFALNSRYLGNADLLETAKRMARHFLAR-V-PEDGVV-- 263 (377)
T ss_dssp TSCBCSEEEECTTTCCEEEEECSSSSSTTSCBHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT-C-CTTSSC--
T ss_pred CCCeEEEEEeeCCCCCeeeCCCcCCcCCcchhHHHHHHHHHHHHHHHHHHCChHHHHHHHHHHHHHHHh-h-HHhCCc--
Confidence 22111000 0011111100 0113588999999999999999999988888753 3 221111
Q ss_pred CCCCCC-cccccCCCCCcccchhhHHHHHHHHHHhcccC-----CchhHHHHHHHHhh
Q 005721 206 EFWSDP-KRLASNLDSNTEESCTTYNMLKVSRHLFRWTK-----EIAYADYYERSLTN 257 (681)
Q Consensus 206 E~f~~p-~~l~~~l~~~~~EtCas~nmlkl~~~Lf~~tg-----d~~YaD~~EralyN 257 (681)
+|.-. ..++....+..+-.+++.+++++++ +++ +.+|.+..|+++-.
T Consensus 264 -ywd~~~~~~~~~~~d~Sa~aiaA~~Ll~L~~----~~~~~~~~~~~Y~~~A~~~l~~ 316 (377)
T 2ahf_A 264 -YWDFEVPQEPSSYRDSSASAITACGLLEIAS----QLDESDPERQRFIDAAKTTVTA 316 (377)
T ss_dssp -BSBTTSCCCTTSCBCHHHHHHHHHHHHHHHH----TSCTTCHHHHHHHHHHHHHHHH
T ss_pred -ccccCCCccCCCccCCCHHHHHHHHHHHHHH----hcCccccchHHHHHHHHHHHHH
Confidence 22111 1122111122333455566666655 454 67799999988843
No 10
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=98.55 E-value=7.2e-07 Score=95.81 Aligned_cols=171 Identities=11% Similarity=0.012 Sum_probs=107.5
Q ss_pred cccCCchHHHHHHHHHHHHHHHhhhhCCCcee-eccCCchhhhhhccCCCcccccchHHHHHHHHHHHHHcCCHHHHHHH
Q 005721 2 WASTHNESLKEKMSAVVSALSACQKEIGSGYL-SAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQYTYADNAEALRMT 80 (681)
Q Consensus 2 ya~t~D~~L~~k~~~~V~~l~~~Q~~~~dGYl-~~~~~~~~~~~~~~~~~W~pyy~~HkI~aGLld~y~~tG~~~aL~va 80 (681)
|..|+|+++++.+.+.+..+... .+|++ ..+ .+.. .. +..+++++|+.||+++.|+++
T Consensus 59 ~~~tgd~~y~~~a~~~~~~~~~~----~~~~~~~~~----~DD~-----------a~--~~la~~~aye~t~~~~yL~~A 117 (349)
T 3k7x_A 59 YLRTKKQADLEVAEKTYLHNKNR----NGGTLIHDF----YDDM-----------LW--NALAAYRLYKATGKSIYLEDA 117 (349)
T ss_dssp HHHHCCHHHHHHHHHHHHHHHHH----TTSSSCCSB----HHHH-----------HH--HHHHHHHHHHHHCCHHHHHHH
T ss_pred HHHhCCHHHHHHHHHHHHHHHhc----CCCCCCccC----ccHH-----------HH--HHHHHHHHHHHHCCchHHHHH
Confidence 56799999999999988877653 22332 222 1111 11 235778999999999999999
Q ss_pred HHHHHHH-HHHhhhhhhcccccccccccc------ccccchHHHHHHHHHhcCCHHHHHHHhhccc---cccchhhhhcC
Q 005721 81 TWMVEYF-YNRVQNVIKKYSIERHWQTLN------EEAGGMNDVLYKLFCITQDPKHLMLAHLFDK---PCFLGLLALQA 150 (681)
Q Consensus 81 ~~~ad~~-~~~~~~~~~~~~~~~~~~~l~------~E~GGmne~L~~LY~~TGd~~yL~lA~~f~~---~~~~~~l~~~~ 150 (681)
..+.+++ ..++.+... ..-.|..-. ..-|-+...+.+||++|||++||+.|++..+ ..++++...=.
T Consensus 118 ~~l~~~l~~~~wd~~~g---GGi~W~~~~~~~knaisN~~~~~~la~l~~~tgd~~Yl~~A~~~~~w~~~~l~d~~g~v~ 194 (349)
T 3k7x_A 118 QLVWQDLVDTGWNDIMG---GGFAWRRPQMYYKNTPVNAPFIILSCWLYNELNETKYLEWAMKTYEWQTKVLVREDGFVE 194 (349)
T ss_dssp HHHHHHHHHHTBCSGGG---SCBEEETTEEEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHBCTTSCBC
T ss_pred HHHHHHHHHhCCCCCCC---CceEecCCCccccchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCCCCCeEe
Confidence 9999999 665543211 111233211 0112345789999999999999999986421 11222110000
Q ss_pred CCCC----------CCcccCccccchHHHHHHHHhCChHHHHHHHHHHHHhhcccee
Q 005721 151 DDIS----------GFHSNTHIPIVIGSQMRYEVTGDQLHKTISMFFMDIVNSSHTY 197 (681)
Q Consensus 151 D~l~----------g~HanthiP~~~G~a~~Y~~TGd~~y~~aa~~f~d~v~~~h~y 197 (681)
|.+. ..++..+...+.|.+.+|++|||+.|++.++...+.+.+ +..
T Consensus 195 Dg~~~~~~g~~~~~~~~tYnqg~~l~g~~~LY~~T~d~~yl~~a~~l~~~~~~-~f~ 250 (349)
T 3k7x_A 195 DGINRLEDGTIDYEWKFTYNQGVYIGANLELYRITKEAIYLDTANKTAAISLK-ELT 250 (349)
T ss_dssp CEECTTSSSCBCTTCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH-HHE
T ss_pred cCCccCCCCccCCcCeeeHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHH-Hhc
Confidence 1110 112222233457789999999999999999999998764 444
No 11
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=98.52 E-value=1.6e-06 Score=93.05 Aligned_cols=180 Identities=18% Similarity=0.153 Sum_probs=112.4
Q ss_pred cccccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhhhh-hccccccccccccccccchHHHHHHHHHhcCCHH
Q 005721 51 WAPYYTIHKILAGLLDQYTYADNAEALRMTTWMVEYFYNRVQNVI-KKYSIERHWQTLNEEAGGMNDVLYKLFCITQDPK 129 (681)
Q Consensus 51 W~pyy~~HkI~aGLld~y~~tG~~~aL~va~~~ad~~~~~~~~~~-~~~~~~~~~~~l~~E~GGmne~L~~LY~~TGd~~ 129 (681)
|--+++.|. +.+|+|+|++||+++.++++.+..+++..+-...+ ....++. .+ +..++.++|++|||++
T Consensus 43 ~~yWW~a~~-~~~l~d~~~~tgd~~y~~~a~~~~~~~~~~~~~~~~~~~~DD~-------a~--~~la~~~aye~t~~~~ 112 (349)
T 3k7x_A 43 FNYWWLAHL-VEVRLDAYLRTKKQADLEVAEKTYLHNKNRNGGTLIHDFYDDM-------LW--NALAAYRLYKATGKSI 112 (349)
T ss_dssp CCHHHHHHH-HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTTSSSCCSBHHHH-------HH--HHHHHHHHHHHHCCHH
T ss_pred CCccHHHHH-HHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCCCCCccCccHH-------HH--HHHHHHHHHHHHCCch
Confidence 333457777 48999999999999999999999998875422110 1111111 11 3368999999999999
Q ss_pred HHHHHhhccc----cccchhhhhcCCCCCCCccc----------CccccchHHHHHHHHhCChHHHHHHHHHHHHhhccc
Q 005721 130 HLMLAHLFDK----PCFLGLLALQADDISGFHSN----------THIPIVIGSQMRYEVTGDQLHKTISMFFMDIVNSSH 195 (681)
Q Consensus 130 yL~lA~~f~~----~~~~~~l~~~~D~l~g~Han----------thiP~~~G~a~~Y~~TGd~~y~~aa~~f~d~v~~~h 195 (681)
||++|+.+-+ ..+.++.. .|+..+ +..+.+...+++|++|||+.|++.|+.-|+.+.+ +
T Consensus 113 yL~~A~~l~~~l~~~~wd~~~g------GGi~W~~~~~~~knaisN~~~~~~la~l~~~tgd~~Yl~~A~~~~~w~~~-~ 185 (349)
T 3k7x_A 113 YLEDAQLVWQDLVDTGWNDIMG------GGFAWRRPQMYYKNTPVNAPFIILSCWLYNELNETKYLEWAMKTYEWQTK-V 185 (349)
T ss_dssp HHHHHHHHHHHHHHHTBCSGGG------SCBEEETTEEEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH-H
T ss_pred HHHHHHHHHHHHHHhCCCCCCC------CceEecCCCccccchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHh-c
Confidence 9999975421 11211111 122221 1122345678889999999999999999999875 4
Q ss_pred eee-ecCCCCCCCCCCCcccccCC-CCCcccchhhHH---HHHHHHHHhcccCCchhHHHHHHHH
Q 005721 196 TYA-TGGTSVGEFWSDPKRLASNL-DSNTEESCTTYN---MLKVSRHLFRWTKEIAYADYYERSL 255 (681)
Q Consensus 196 ~y~-tGG~s~~E~f~~p~~l~~~l-~~~~~EtCas~n---mlkl~~~Lf~~tgd~~YaD~~Eral 255 (681)
++- .|.+-.+ +.... .....+..=||| +|.-+-.|++.|+|++|.+..++.+
T Consensus 186 l~d~~g~v~Dg--------~~~~~~g~~~~~~~~tYnqg~~l~g~~~LY~~T~d~~yl~~a~~l~ 242 (349)
T 3k7x_A 186 LVREDGFVEDG--------INRLEDGTIDYEWKFTYNQGVYIGANLELYRITKEAIYLDTANKTA 242 (349)
T ss_dssp HBCTTSCBCCE--------ECTTSSSCBCTTCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred CCCCCCeEecC--------CccCCCCccCCcCeeeHHHHHHHHHHHHHHHhhCcHHHHHHHHHHH
Confidence 431 1211111 11000 000111233333 5666778999999999999998876
No 12
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=98.21 E-value=8.4e-06 Score=88.87 Aligned_cols=256 Identities=9% Similarity=0.057 Sum_probs=147.5
Q ss_pred cccCCchHHHHHHHHHHHHHHHhhhhCC-CceeeccCCchhhhhhccCCCcccccchHHHHHHHHHHHHHcCCHHHHHHH
Q 005721 2 WASTHNESLKEKMSAVVSALSACQKEIG-SGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQYTYADNAEALRMT 80 (681)
Q Consensus 2 ya~t~D~~L~~k~~~~V~~l~~~Q~~~~-dGYl~~~~~~~~~~~~~~~~~W~pyy~~HkI~aGLld~y~~tG~~~aL~va 80 (681)
|..++++++++.++..++.|.+.-.... .||...+.+. +.. ..=...|..-.++.||++ |..||++++|+.|
T Consensus 65 ~~~~g~~~~l~~A~~~~~fl~~~~~d~~~Gg~~~~~~dG-----~~~-~~~~~lyd~Af~i~al~~-~~~tgd~~~l~~A 137 (402)
T 3gt5_A 65 YLQFGTAEYLDAVHHGLSYVRDVHRNPATGGYAWTLCDD-----RVE-DDTNHCYGLAFVMLAYSC-GLKVGIKQAREWM 137 (402)
T ss_dssp HHHHCCHHHHHHHHHHHHHHHHTTBCTTTSCBCSEEETT-----EEE-ECCEEHHHHHHHHHHHHH-HHHTTCTTHHHHH
T ss_pred HHhhCChHHHHHHHHHHHHHHHhCccCCCCcEEEEeeCC-----CCC-cCCcchHHHHHHHHHHHH-HHHhCChhHHHHH
Confidence 4457999999999999999987532112 3565443110 000 000123444446678877 7779999999999
Q ss_pred HHHHHHHHHHhhhhhhc-cc--cccccccccccccch------HHHHHHHHHhcCCHHHHHHHhhccc---cccchhhhh
Q 005721 81 TWMVEYFYNRVQNVIKK-YS--IERHWQTLNEEAGGM------NDVLYKLFCITQDPKHLMLAHLFDK---PCFLGLLAL 148 (681)
Q Consensus 81 ~~~ad~~~~~~~~~~~~-~~--~~~~~~~l~~E~GGm------ne~L~~LY~~TGd~~yL~lA~~f~~---~~~~~~l~~ 148 (681)
.++.+++.+++.....+ +. ...-|. +... -++ .+++.+||++|||++|++.|+.+.+ ..|.++...
T Consensus 138 ~~l~~~i~~~f~d~~~G~~~~~~~~~~~-~~~~-~~~n~~m~l~eall~L~~~tgd~~~~~~a~~l~~~~~~~f~~~~~g 215 (402)
T 3gt5_A 138 DETWCLLERHFWDAEYGLYKDEADAQWN-FTRY-RGQNANMHMCEAMLAAYEASGEQRYLERALVLADRITRRQAAKADG 215 (402)
T ss_dssp HHHHHHHHHHTEETTTTEECCEECTTCC-BCSC-EEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTHHHHTTTT
T ss_pred HHHHHHHHHHhcCCcCCCchhhhCCCCC-CCCC-CCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhhCccCC
Confidence 99999999876431111 10 011122 1110 112 3679999999999999999876432 122222100
Q ss_pred ------cCCCCCCCcccCccc--------cchHH--------HHHHHHhCChHHHHHHHHHHHHhhccceee--ecCCCC
Q 005721 149 ------QADDISGFHSNTHIP--------IVIGS--------QMRYEVTGDQLHKTISMFFMDIVNSSHTYA--TGGTSV 204 (681)
Q Consensus 149 ------~~D~l~g~HanthiP--------~~~G~--------a~~Y~~TGd~~y~~aa~~f~d~v~~~h~y~--tGG~s~ 204 (681)
..|--.....|..-| +--|| ...++++|++.|++.|+..++.+.+ +++- .||+--
T Consensus 216 ~l~e~~~~dw~~~~~~~~~~~~~~~~~~~~~pGH~iE~awlLl~~~~~~~~~~~~~~A~~l~~~~~~-~gwd~~~Gg~~~ 294 (402)
T 3gt5_A 216 LVWEHYDMRWEVDWDYNRDNPKHLFRPWGFQPGHQTEWAKLLLILDRYIEVEWLVPVARSLFDVAVA-RSWDAVRGGLCY 294 (402)
T ss_dssp SCCSEECTTSCBCTTTTTTSTTCSSSCSSBCHHHHHHHHHHHHHHHHHCCCTTHHHHHHHHHHHHHH-HHBCTTTCSBCS
T ss_pred eeEEEECCCCCCccccccCCcccccCcCCCCCChHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHH-hcccCCCCcEEE
Confidence 000000000011111 22354 4457889999999999998888754 3332 344421
Q ss_pred CCCCCCCcccccCCCCCcccchhhHHHHHHHHHHhcccCCchhHHHHHHHH---hhhcccccCCCCCCeEEEecC
Q 005721 205 GEFWSDPKRLASNLDSNTEESCTTYNMLKVSRHLFRWTKEIAYADYYERSL---TNGVLGIQRGTEPGVMIYLLP 276 (681)
Q Consensus 205 ~E~f~~p~~l~~~l~~~~~EtCas~nmlkl~~~Lf~~tgd~~YaD~~Eral---yN~ila~q~~~~~g~~~Y~~p 276 (681)
+ .+++ +.........+...+.|.-+-.|++.|||.+|.+.++++. ..+++-.. .++.+.+.++
T Consensus 295 -~--~d~~---g~~~~~~k~~W~qaEal~a~l~ly~~tgd~~yl~~a~~~~~~~~~~~~D~~---~G~W~~~l~~ 360 (402)
T 3gt5_A 295 -G--FAPD---GTICDDDKYFWVQAESLAAAALLATRSGDERYWQWYDRLWAYAWQHMVDHR---YGAWYRLLDG 360 (402)
T ss_dssp -E--ECTT---SCEEECCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTBCTT---TCSBCSEECT
T ss_pred -E--EcCC---CCeeeCCcceeHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCcCCC---CCeEEEEECC
Confidence 1 1111 1112345577777888888889999999999999998875 34443221 3345555544
No 13
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=98.20 E-value=4.9e-06 Score=89.63 Aligned_cols=210 Identities=5% Similarity=-0.128 Sum_probs=116.5
Q ss_pred HHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHHhhhhhhccc--cccccccccc-----cccchHHHHHHHHHhcCCHHHH
Q 005721 60 ILAGLLDQYTY-ADNAEALRMTTWMVEYFYNRVQNVIKKYS--IERHWQTLNE-----EAGGMNDVLYKLFCITQDPKHL 131 (681)
Q Consensus 60 I~aGLld~y~~-tG~~~aL~va~~~ad~~~~~~~~~~~~~~--~~~~~~~l~~-----E~GGmne~L~~LY~~TGd~~yL 131 (681)
++..+..+|+. +|+++.+++|.+.++|+.+.+...-.++- ...-..++.. ..+=|..+|.++|+.|||++||
T Consensus 58 ~i~~~a~a~~~~~~~~~~~~~A~~~~~~l~~~~~~~~Gg~~~~~d~dg~~~~~~~~~~~~af~i~al~~~y~~tg~~~~l 137 (388)
T 2gz6_A 58 QVWTFSMLCNQLEKRENWLKIARNGAKFLAQHGRDDEGNWYFALTRGGEPLVQPYNIFSDCFAAMAFSQYALASGEEWAK 137 (388)
T ss_dssp HHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHSBCTTSCBCSEECTTSCBCCCCCCHHHHHHHHHHHHHHHHHHCCHHHH
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcccCCcchHHHHHHHHHHHHHHHHhCCHHHH
Confidence 44455678898 89999999999999999887532101100 0000000100 0011347899999999999999
Q ss_pred HHHhhccc---cccchhh------hhcCCCCCCCcccCccccchHHHHHHHHhCChHHHHHHHHHHHHhhccceeeecCC
Q 005721 132 MLAHLFDK---PCFLGLL------ALQADDISGFHSNTHIPIVIGSQMRYEVTGDQLHKTISMFFMDIVNSSHTYATGGT 202 (681)
Q Consensus 132 ~lA~~f~~---~~~~~~l------~~~~D~l~g~HanthiP~~~G~a~~Y~~TGd~~y~~aa~~f~d~v~~~h~y~tGG~ 202 (681)
+.|+...+ ..+.++. ........+ .+.+.-.+.++..+|++|+|+.|++.++...+.+.+ +.+-..+-
T Consensus 138 ~~A~~~~~~i~~~~~d~~g~~~~~~~~~~~~~~--~~~~~~~~~all~l~~~t~d~~~~~~A~~~~~~~~~-~~~~~~~g 214 (388)
T 2gz6_A 138 DVAMQAYNNVLRRKDNPKGKYTKTYPGTRPMKA--LAVPMILANLTLEMEWLLPQETLENVLAATVQEVMG-DFLDQEQG 214 (388)
T ss_dssp HHHHHHHHHHHTC--------------CCCCEE--THHHHHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHH-TTEETTTT
T ss_pred HHHHHHHHHHHHHhcCCCcccCcccCCCCCCCC--CCHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH-HHhccCCC
Confidence 99876421 1221110 000001111 111122345567789999999999999999998875 33321111
Q ss_pred CCCCCCCCCcccccCCCCCcccchhhHHHHHHHHHHhcccCCchhHHHHHHHHhhhcccccCCCCCCeEEE
Q 005721 203 SVGEFWSDPKRLASNLDSNTEESCTTYNMLKVSRHLFRWTKEIAYADYYERSLTNGVLGIQRGTEPGVMIY 273 (681)
Q Consensus 203 s~~E~f~~p~~l~~~l~~~~~EtCas~nmlkl~~~Lf~~tgd~~YaD~~EralyN~ila~q~~~~~g~~~Y 273 (681)
.-.|+|...............+.....++..+.-++.+++||.+|.+..++++-..+--+.++ +.|.++|
T Consensus 215 ~~~e~~~~~w~~~~~~~~~~~~pgh~~e~a~lL~~~~~~tgd~~~~~~A~~~~~~~~~~g~d~-~~Gg~~~ 284 (388)
T 2gz6_A 215 LMYENVAPDGSHIDCFEGRLINPGHGIEAMWFIMDIARRKNDSKTINQAVDVVLNILNFAWDN-EYGGLYY 284 (388)
T ss_dssp EECSEECTTSCCCCSTTTTEECHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHBCT-TTCSBCS
T ss_pred eEEEEECCCCCCCCCcccCcCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhccC-CCCCEEE
Confidence 122443332111010112234444455666667778888999999999988775443333444 4344444
No 14
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A
Probab=98.12 E-value=9.9e-06 Score=87.96 Aligned_cols=215 Identities=13% Similarity=0.122 Sum_probs=126.9
Q ss_pred cccCCchHHHHHHHHHHHHHHHhhhhCCCceeeccCCchhhhhhccCCCcccccchHHHHHHHHHHHHHcCCHHHHHHHH
Q 005721 2 WASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQYTYADNAEALRMTT 81 (681)
Q Consensus 2 ya~t~D~~L~~k~~~~V~~l~~~Q~~~~dGYl~~~~~~~~~~~~~~~~~W~pyy~~HkI~aGLld~y~~tG~~~aL~va~ 81 (681)
|..|+|+++++.+..+++.+.+. +|-+. +.. -+. ++..|++.|+.||+++.++++.
T Consensus 81 ye~Tgd~~y~~~a~~~~~~~~~~-----~~~~~-----------n~D----~~~----~~~~l~~lY~~Tgd~~Yl~~a~ 136 (382)
T 3pmm_A 81 YQQTGDIEMRDIIDRWFADRFAE-----GATTK-----------NVN----TMA----PFLTLAYRFEETGRMAYLPWLE 136 (382)
T ss_dssp HHHHCCHHHHHHHHHHHHHHHHH-----CCCCC-----------CTT----TTT----THHHHHHHHHHHCCGGGHHHHH
T ss_pred HHHHCCHHHHHHHHHHHHHHHcC-----CCCcC-----------ccc----chH----HHHHHHHHHHHhCCHHHHHHHH
Confidence 67899999999999999977542 12110 001 112 2235679999999999999999
Q ss_pred HHHHHHHHHhhhhhh-ccc--------cccccccccccccchH-HHHHHHHHhcCCHHHHHHHhh-cc--ccccchhhhh
Q 005721 82 WMVEYFYNRVQNVIK-KYS--------IERHWQTLNEEAGGMN-DVLYKLFCITQDPKHLMLAHL-FD--KPCFLGLLAL 148 (681)
Q Consensus 82 ~~ad~~~~~~~~~~~-~~~--------~~~~~~~l~~E~GGmn-e~L~~LY~~TGd~~yL~lA~~-f~--~~~~~~~l~~ 148 (681)
.+++++.+++.+... .+. ..+.| +..-+ |+ ..|+++|++|||++|++.|.+ |. ...++++..
T Consensus 137 ~~ad~L~~~~~r~~~Ggf~~~~~~~~~~~~~W--iDgl~--M~~p~La~~~~~tgd~~y~d~A~~q~~~~~~~l~D~~t- 211 (382)
T 3pmm_A 137 SWAEWAMHEMPRTEQGGMQHMTLAEENHQQMW--DDTLM--MTVLPLAKIGKLLNRPQYVEEATYQFLLHVQNLMDRET- 211 (382)
T ss_dssp HHHHHHHHTSCBCGGGCBCCCCSSCCCTTEEE--TTHHH--HTHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHBCTTT-
T ss_pred HHHHHHHhhCCCCcCCCeeeecCCCCCCCcEE--ecchh--hhHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHccCCCC-
Confidence 999999765432100 000 01112 11111 55 578999999999999998843 21 111222210
Q ss_pred cCCCCCCCcccCcc------cc---------chHHHHHHHH-------hCChHHHHHHHHHHHHhhccceeeecCCCCCC
Q 005721 149 QADDISGFHSNTHI------PI---------VIGSQMRYEV-------TGDQLHKTISMFFMDIVNSSHTYATGGTSVGE 206 (681)
Q Consensus 149 ~~D~l~g~Hanthi------P~---------~~G~a~~Y~~-------TGd~~y~~aa~~f~d~v~~~h~y~tGG~s~~E 206 (681)
-+ ..|..++. +. +.|.++.|+. ++++.|++..+..-+-+.++.- .+|
T Consensus 212 ---Gl-~~h~~~~~~~~~~~~~~WaRG~gW~~~gl~~~l~~l~~p~~~~~~~~~~~~~~~~a~~~~~~q~-~~G------ 280 (382)
T 3pmm_A 212 ---GL-WFHGWNYEGRHNFARARWARGNSWLTMVIPDFLELVDLPEGNAVRRYLITVLDAQIAALAECQD-DSG------ 280 (382)
T ss_dssp ---SC-BCSEEETTTTBCTTCCCBHHHHHHHHHHHHHHHHHHCCCTTCHHHHHHHHHHHHHHHHHHHHCC-TTS------
T ss_pred ---CC-eeeeccCCCCCCCCcceecccccHHHHHHHHHHHhhcCCcchhhHHHHHHHHHHHHHHHHHcCC-CCC------
Confidence 01 12332221 21 3678888987 5566777777777777665442 233
Q ss_pred CCCCCcccccCCCCCcccchh----hHHHHHHHHHHhcccCCchhHHHHHHHHhhhcccccC
Q 005721 207 FWSDPKRLASNLDSNTEESCT----TYNMLKVSRHLFRWTKEIAYADYYERSLTNGVLGIQR 264 (681)
Q Consensus 207 ~f~~p~~l~~~l~~~~~EtCa----s~nmlkl~~~Lf~~tgd~~YaD~~EralyN~ila~q~ 264 (681)
.|.. +.+ .+..+.||-+ +|.|++..+.=+ + +.+|.+..||++ ++++...+
T Consensus 281 ~W~~---~~d-~~~~y~EsSatA~~ay~ll~~~~~g~-l--~~~Y~~~a~ka~-~~l~~~i~ 334 (382)
T 3pmm_A 281 LWHT---LLD-DPHSYLEASATAGFAYGILKAVRKRY-V--GQHYAGVAEKAI-RGIVQNIS 334 (382)
T ss_dssp CEES---BTT-CTTSCEEHHHHHHHHHHHHHHHHTTS-S--CGGGHHHHHHHH-HHHHHTBC
T ss_pred Chhh---ccC-CCCCCccccHHHHHHHHHHHHHHcCC-C--cHHHHHHHHHHH-HHHHhhCC
Confidence 3321 111 1234556544 478887776311 1 468999999965 78877654
No 15
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=98.11 E-value=3.3e-05 Score=84.67 Aligned_cols=258 Identities=9% Similarity=0.036 Sum_probs=144.6
Q ss_pred CCchHHHHHHHHHHHHHHHhhhhC-CCceeeccCCchhhhhhccCCCcccccchHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 005721 5 THNESLKEKMSAVVSALSACQKEI-GSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQYTYADNAEALRMTTWM 83 (681)
Q Consensus 5 t~D~~L~~k~~~~V~~l~~~Q~~~-~dGYl~~~~~~~~~~~~~~~~~W~pyy~~HkI~aGLld~y~~tG~~~aL~va~~~ 83 (681)
+++++.++.++..++.|.+.-... +.|++..... .++...+ ...|..=.++.++++ |+.||++++++++...
T Consensus 66 ~g~~~~l~~A~~~~~fl~~~~~D~~~GG~~~s~d~----dg~~~~~--k~lyd~Af~i~al~~-~~~tg~~~~l~~a~~~ 138 (421)
T 2zbl_A 66 MGRPGAYDLVDHGIKAMNGALRDKKYGGWYACVND----QGVVDAS--KQGYQHFFALLGAAS-AVTTGHPEARKLLDYT 138 (421)
T ss_dssp TTCTTHHHHHHHHHHHHTTTTBCTTTSSBCSEEET----TEEEECC--EEHHHHHHHHHHHHH-HHTTTCTTHHHHHHHH
T ss_pred cCChhHHHHHHHHHHHHHHhccCcCCCeEEEEeCC----CCCcCCc--hhHHHHHHHHHHHHH-HHHhCCccHHHHHHHH
Confidence 789999999999999998774311 2466633211 1110110 233444446678877 9999999999999999
Q ss_pred HHHHHHHhhhhhhc-c--ccccccccccc--cccc---hHHHHHHHHHhcCCHHHHHHHhhccc---cccchh----hh-
Q 005721 84 VEYFYNRVQNVIKK-Y--SIERHWQTLNE--EAGG---MNDVLYKLFCITQDPKHLMLAHLFDK---PCFLGL----LA- 147 (681)
Q Consensus 84 ad~~~~~~~~~~~~-~--~~~~~~~~l~~--E~GG---mne~L~~LY~~TGd~~yL~lA~~f~~---~~~~~~----l~- 147 (681)
.+++.+.+.....+ + ....-+..+.. ...+ +.++|.+||++|||++|++.|+...+ ..+..+ +.
T Consensus 139 ~~~l~~~~~d~~~Ggf~~~~d~d~~~~~~~~~~n~~m~~~~al~~l~~~tgd~~~~~~A~~~~~~~~~~~~~~~~~~l~~ 218 (421)
T 2zbl_A 139 IEVIEKYFWSEEEQMCLESWDEAFSQTEDYRGGNANMHAVEAFLIVYDVTHDKKWLDRALRIASVIIHDVARNGDYRVNE 218 (421)
T ss_dssp HHHHHHHTEETTTTEECCEECTTSCSBCSCEEHHHHHHHHHHHHHHHHTTCCTHHHHHHHHHHHHHCCCCCGGGTTCCCC
T ss_pred HHHHHHHhccCCCCCeeeeecCCCCcccccCCCcHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhccCCCCchhh
Confidence 99998876431111 0 00111111100 0001 25789999999999999987765321 111110 00
Q ss_pred -hcCC--CCCCC----cccCcc-----cc-----chHHHHHHHHh---CC--h-HHHHHHHHHHHHhhccceee-e--cC
Q 005721 148 -LQAD--DISGF----HSNTHI-----PI-----VIGSQMRYEVT---GD--Q-LHKTISMFFMDIVNSSHTYA-T--GG 201 (681)
Q Consensus 148 -~~~D--~l~g~----Hanthi-----P~-----~~G~a~~Y~~T---Gd--~-~y~~aa~~f~d~v~~~h~y~-t--GG 201 (681)
-..+ .+.+. -.+... |- +-+.+..|+++ || + .|++.|+..++.+.+ +++- . ||
T Consensus 219 ~f~~~~~~~~~~~~dd~~~r~~~~~~~pgh~iE~~wlLl~~~~~~~~~~~~~~~~~l~~A~~l~~~~~~-~g~d~~~~GG 297 (421)
T 2zbl_A 219 HFDSQWNPIRDYNKDNPAHRFRAYGGTPGAWIEWGRLMLHLHAALEARFETPPAWLLEDAKGLFHATIR-DAWAPDGADG 297 (421)
T ss_dssp EECTTSCBCTTTTTTSTTCSSSCSSBCHHHHHHHHHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHHH-HHBSCSSSSS
T ss_pred hcCCccccchhccCCCcccccccCCCCCChHHHHHHHHHHHHHHcccccccchHHHHHHHHHHHHHHHH-HhcCCCCCCc
Confidence 0000 01010 011111 10 11346668998 66 5 899999999998864 4442 2 44
Q ss_pred CCCCCCCCCCcccccCCCCCcccchhhHHHHHHHHHHhcccCCchhHHHHHHHHhhhccccc-CCCCCCeEEEecCC
Q 005721 202 TSVGEFWSDPKRLASNLDSNTEESCTTYNMLKVSRHLFRWTKEIAYADYYERSLTNGVLGIQ-RGTEPGVMIYLLPL 277 (681)
Q Consensus 202 ~s~~E~f~~p~~l~~~l~~~~~EtCas~nmlkl~~~Lf~~tgd~~YaD~~EralyN~ila~q-~~~~~g~~~Y~~pl 277 (681)
.--. ..+ .+.+.....+.+...+++.-.-.|+++|||.+|.+.+++++ +.+.... ++..++.+.+..+-
T Consensus 298 ~~~~---~~~---~g~~~~~~k~~w~~aea~~all~l~~~tgd~~yl~~a~~~~-~~~~~~~~d~~~G~w~~~l~~~ 367 (421)
T 2zbl_A 298 FVYS---VDW---DGKPIVRERVRWPIVEAMGTAYALYTLTDDSQYEEWYQKWW-DYCIKYLMDYENGSWWQELDAD 367 (421)
T ss_dssp BCSC---BCT---TSCBSCCCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH-HHHHHHTBCTTTSSBCSEECTT
T ss_pred EEEe---ecC---CCCccCCCcccHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH-HHHHHhCCCCCCCeeEeeECcC
Confidence 3211 111 11222345566667777777888999999999999999864 4433322 22233444555443
No 16
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A*
Probab=98.02 E-value=1.1e-05 Score=87.02 Aligned_cols=215 Identities=15% Similarity=0.189 Sum_probs=130.3
Q ss_pred cccCCchHHHHHHHHHHHHHHHhhhhCCCceeeccCCchhhhhhccCCCcccccchHHHHHHHHHHHHHcCCHHHHHHHH
Q 005721 2 WASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQYTYADNAEALRMTT 81 (681)
Q Consensus 2 ya~t~D~~L~~k~~~~V~~l~~~Q~~~~dGYl~~~~~~~~~~~~~~~~~W~pyy~~HkI~aGLld~y~~tG~~~aL~va~ 81 (681)
|..|+|+++++.+...++.+. + .+|.+. +.... +. .|. +..++++.|+.||+++.++++.
T Consensus 54 y~~tgd~~y~~~a~~~~~~~~---~--~~g~l~-~~~~~---lD--------d~~---~g~~ll~lY~~Tgd~~yl~~a~ 113 (373)
T 1nc5_A 54 WEATGEKRYFEYAKAYADLLI---D--DNGNLL-FRRDE---LD--------AIQ---AGLILFPLYEQTKDERYVKAAK 113 (373)
T ss_dssp HHHHCCHHHHHHHHHHHHHHB---C--TTCCBC-CCTTC---GG--------GTG---GGGGHHHHHHHHCCHHHHHHHH
T ss_pred HHHhCCHHHHHHHHHHHHHHh---C--CCCccc-CCCCC---cc--------hHH---HHHHHHHHHHHhCCHHHHHHHH
Confidence 678999999999999999874 3 466554 32211 11 111 2346789999999999999999
Q ss_pred HHHHHHHHHhhhhhhcccccccccc--------ccccccchH-HHHHHHHHhcCCHHHHHHHhhc-c--ccccchhhhhc
Q 005721 82 WMVEYFYNRVQNVIKKYSIERHWQT--------LNEEAGGMN-DVLYKLFCITQDPKHLMLAHLF-D--KPCFLGLLALQ 149 (681)
Q Consensus 82 ~~ad~~~~~~~~~~~~~~~~~~~~~--------l~~E~GGmn-e~L~~LY~~TGd~~yL~lA~~f-~--~~~~~~~l~~~ 149 (681)
.+++++..++.. .....|.. +.+-+ |+ ..|+++|++|||++|++.|.+- . ...++++.
T Consensus 114 ~la~~l~~~~r~-----~~G~fw~~~~~~~~~w~D~l~--m~~p~L~~l~~~tgd~~y~d~A~~~~~~~~~~l~D~~--- 183 (373)
T 1nc5_A 114 RLRSLYGTLNRT-----SEGGFWHKDGYPYQMWLDGLY--MGGPFALKYANLKQETELFDQVVLQESLMRKHTKDAK--- 183 (373)
T ss_dssp HHHGGGGTSCBC-----TTSCBCSCTTSTTEEETHHHH--HHHHHHHHHHHHHTCTHHHHHHHHHHHHHHHHHBCTT---
T ss_pred HHHHHHHhccCC-----CCCCeeccCCCCCeEEeCcHH--HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHhcCCC---
Confidence 999998654311 11122311 11111 43 6789999999999999998752 1 11122221
Q ss_pred CCCCCCCcccCc-------------cc---------cchHHHHHHHH-----hCChHHHHHHHHHHHHhhccceee-ecC
Q 005721 150 ADDISGFHSNTH-------------IP---------IVIGSQMRYEV-----TGDQLHKTISMFFMDIVNSSHTYA-TGG 201 (681)
Q Consensus 150 ~D~l~g~Hanth-------------iP---------~~~G~a~~Y~~-----TGd~~y~~aa~~f~d~v~~~h~y~-tGG 201 (681)
+-+ ..|..++ -| .+.|.++.|+. ++++.|++.++..-+.+.++.. . +|
T Consensus 184 -tGl-~~h~~~~~~~~~w~d~~tg~~~~~WaRg~gW~~~gl~~~l~~lp~~~~~~~~~~~~~~~~a~~l~~~q~-~~dG- 259 (373)
T 1nc5_A 184 -TGL-FYHAWDEAKKMPWANEETGCSPEFWARSIGWYVMSLADMIEELPKKHPNRHVWKNTLQDMIKSICRYQD-KETG- 259 (373)
T ss_dssp -TSC-BCSEEETTCCSTTSCTTTCBCSCCBHHHHHHHHHHHHHHGGGSCTTCHHHHHHHHHHHHHHHHHHTTSC-TTTS-
T ss_pred -CCC-EEeecCCccccccccccCCCCCCcccchHhHHHHHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHhcC-CCCC-
Confidence 011 0121111 12 23567778887 6888999999998888876442 2 33
Q ss_pred CCCCCCCCCCcccc-cCCCCCccc----chhhHHHHHHHHHHhcccCCchhHHHHHHHHhhhccc
Q 005721 202 TSVGEFWSDPKRLA-SNLDSNTEE----SCTTYNMLKVSRHLFRWTKEIAYADYYERSLTNGVLG 261 (681)
Q Consensus 202 ~s~~E~f~~p~~l~-~~l~~~~~E----tCas~nmlkl~~~Lf~~tgd~~YaD~~EralyN~ila 261 (681)
.|.. .+- ...+..+-| .+.+|.|++..+.-+. |.+|.+..||++ ++++.
T Consensus 260 -----~W~~--~ld~~~~~~~~~EsSatA~~ay~l~~g~~~g~l---~~~Y~~~a~k~~-~~l~~ 313 (373)
T 1nc5_A 260 -----LWYQ--IVDKGDRSDNWLESSGSCLYMYAIAKGINKGYL---DRAYETTLLKAY-QGLIQ 313 (373)
T ss_dssp -----CCBS--BTTCTTSTTCCBCHHHHHHHHHHHHHHHHHTSS---CGGGHHHHHHHH-HHHHH
T ss_pred -----ceee--ecCCCCCCCCCccccHHHHHHHHHHHHHHCCCC---cHHHHHHHHHHH-HHHHH
Confidence 2321 010 111234455 4445888887765322 468999999998 66665
No 17
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A*
Probab=97.90 E-value=6.9e-05 Score=80.92 Aligned_cols=171 Identities=11% Similarity=0.032 Sum_probs=101.8
Q ss_pred HHHHHHHHHHHHHHHhhhhhhccccccccccccccccchHHHHHHHHHhcCCHHHHHHHhhccccccchhhhhcCCCCC-
Q 005721 76 ALRMTTWMVEYFYNRVQNVIKKYSIERHWQTLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDKPCFLGLLALQADDIS- 154 (681)
Q Consensus 76 aL~va~~~ad~~~~~~~~~~~~~~~~~~~~~l~~E~GGmne~L~~LY~~TGd~~yL~lA~~f~~~~~~~~l~~~~D~l~- 154 (681)
....+.+|+|++.++........ ... |.- +.|-|..+|.++|++|||++|++.|+...+.-+ .+ .+ .+.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~-~~~-W~w---~~G~~~~gl~~~y~~tgd~~y~~~a~~~~~~~~-~~--~g--~l~~ 82 (373)
T 1nc5_A 13 PLTYAEALANTIMNTYTVEELPP-ANR-WHY---HQGVFLCGVLRLWEATGEKRYFEYAKAYADLLI-DD--NG--NLLF 82 (373)
T ss_dssp HHHHHHHHHHHHHHHCCTTTSSS-TTC-CCH---HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHB-CT--TC--CBCC
T ss_pred hHHHHHHHHHHHHHhCCCcccCC-CCC-cch---hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh-CC--CC--cccC
Confidence 44788999999998754321110 111 210 234466789999999999999999986533211 10 00 110
Q ss_pred -CCcccCccccchHHHHHHHHhCChHHHHHHHHHHHHhhccceeeecCCCCCCCCCCCcccccCCCCCcccchhh--HHH
Q 005721 155 -GFHSNTHIPIVIGSQMRYEVTGDQLHKTISMFFMDIVNSSHTYATGGTSVGEFWSDPKRLASNLDSNTEESCTT--YNM 231 (681)
Q Consensus 155 -g~HanthiP~~~G~a~~Y~~TGd~~y~~aa~~f~d~v~~~h~y~tGG~s~~E~f~~p~~l~~~l~~~~~EtCas--~nm 231 (681)
..+.. +.....+...+|++|||++|++++...++.+...--...||+ |..+. ....+-|-. .++
T Consensus 83 ~~~~lD-d~~~g~~ll~lY~~Tgd~~yl~~a~~la~~l~~~~r~~~G~f-----w~~~~-------~~~~~w~D~l~m~~ 149 (373)
T 1nc5_A 83 RRDELD-AIQAGLILFPLYEQTKDERYVKAAKRLRSLYGTLNRTSEGGF-----WHKDG-------YPYQMWLDGLYMGG 149 (373)
T ss_dssp CTTCGG-GTGGGGGHHHHHHHHCCHHHHHHHHHHHGGGGTSCBCTTSCB-----CSCTT-------STTEEETHHHHHHH
T ss_pred CCCCcc-hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhccCCCCCCe-----eccCC-------CCCeEEeCcHHHHH
Confidence 00112 222456788899999999999999999999853211122332 43211 111222333 344
Q ss_pred HHHHHHHhcccCCchhHHHHHHHHhhhcccccCCCCCCeE
Q 005721 232 LKVSRHLFRWTKEIAYADYYERSLTNGVLGIQRGTEPGVM 271 (681)
Q Consensus 232 lkl~~~Lf~~tgd~~YaD~~EralyN~ila~q~~~~~g~~ 271 (681)
. +.-++.++|||++|.|..++.+-...---.++ +.|.+
T Consensus 150 p-~L~~l~~~tgd~~y~d~A~~~~~~~~~~l~D~-~tGl~ 187 (373)
T 1nc5_A 150 P-FALKYANLKQETELFDQVVLQESLMRKHTKDA-KTGLF 187 (373)
T ss_dssp H-HHHHHHHHHTCTHHHHHHHHHHHHHHHHHBCT-TTSCB
T ss_pred H-HHHHHHHHHCCHHHHHHHHHHHHHHHHHhcCC-CCCCE
Confidence 4 44558999999999999999775554333444 45543
No 18
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=97.88 E-value=7.2e-05 Score=81.46 Aligned_cols=185 Identities=9% Similarity=-0.028 Sum_probs=108.5
Q ss_pred cccCCchHHHHHHHHHHHHHHHhh-hhCCCceeeccCCchhhhhhccCCCcccccchHHHHHHHHHHHHHcCCHHHHHHH
Q 005721 2 WASTHNESLKEKMSAVVSALSACQ-KEIGSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQYTYADNAEALRMT 80 (681)
Q Consensus 2 ya~t~D~~L~~k~~~~V~~l~~~Q-~~~~dGYl~~~~~~~~~~~~~~~~~W~pyy~~HkI~aGLld~y~~tG~~~aL~va 80 (681)
|..|+|++.++++.++.+.|.+.- +..+.||..++... ++ ....=.+.-..|.+. +++..|++||+++.++.+
T Consensus 125 ~~~tgd~~~l~~A~~l~~~i~~~f~d~~~G~~~~~~~~~----~~-~~~~~~~n~~m~l~e-all~L~~~tgd~~~~~~a 198 (402)
T 3gt5_A 125 GLKVGIKQAREWMDETWCLLERHFWDAEYGLYKDEADAQ----WN-FTRYRGQNANMHMCE-AMLAAYEASGEQRYLERA 198 (402)
T ss_dssp HHHTTCTTHHHHHHHHHHHHHHHTEETTTTEECCEECTT----CC-BCSCEEHHHHHHHHH-HHHHHHHHHCCHHHHHHH
T ss_pred HHHhCChhHHHHHHHHHHHHHHHhcCCcCCCchhhhCCC----CC-CCCCCCCCHHHHHHH-HHHHHHHhhCCHHHHHHH
Confidence 345899999999999999998773 31134565443321 11 111001111234443 566899999999999999
Q ss_pred HHHHHHHHHHhhhhhhcc---cccccccccc---------------ccccchHH---HHHHHHHhcCCHHHHHHHhhccc
Q 005721 81 TWMVEYFYNRVQNVIKKY---SIERHWQTLN---------------EEAGGMND---VLYKLFCITQDPKHLMLAHLFDK 139 (681)
Q Consensus 81 ~~~ad~~~~~~~~~~~~~---~~~~~~~~l~---------------~E~GGmne---~L~~LY~~TGd~~yL~lA~~f~~ 139 (681)
.++++.+..++...-.+. ....-|.... .+.|-+.| -|.+++++||+++|++.|+.+-+
T Consensus 199 ~~l~~~~~~~f~~~~~g~l~e~~~~dw~~~~~~~~~~~~~~~~~~~~~pGH~iE~awlLl~~~~~~~~~~~~~~A~~l~~ 278 (402)
T 3gt5_A 199 LVLADRITRRQAAKADGLVWEHYDMRWEVDWDYNRDNPKHLFRPWGFQPGHQTEWAKLLLILDRYIEVEWLVPVARSLFD 278 (402)
T ss_dssp HHHHHHHHTHHHHTTTTSCCSEECTTSCBCTTTTTTSTTCSSSCSSBCHHHHHHHHHHHHHHHHHCCCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCccCCeeEEEECCCCCCccccccCCcccccCcCCCCCChHHHHHHHHHHHHHhhCcHHHHHHHHHHHH
Confidence 999999987664311110 0011122210 12232223 47889999999999999987532
Q ss_pred cc---cchhhhhc----CCCCCCC------cccCccccchHHHHHHHHhCChHHHHHHHHHHHHhhc
Q 005721 140 PC---FLGLLALQ----ADDISGF------HSNTHIPIVIGSQMRYEVTGDQLHKTISMFFMDIVNS 193 (681)
Q Consensus 140 ~~---~~~~l~~~----~D~l~g~------HanthiP~~~G~a~~Y~~TGd~~y~~aa~~f~d~v~~ 193 (681)
.. ..++...+ .|. .+. ..-.|...++|++.+|++|||+.|++.++..|+.+.+
T Consensus 279 ~~~~~gwd~~~Gg~~~~~d~-~g~~~~~~k~~W~qaEal~a~l~ly~~tgd~~yl~~a~~~~~~~~~ 344 (402)
T 3gt5_A 279 VAVARSWDAVRGGLCYGFAP-DGTICDDDKYFWVQAESLAAAALLATRSGDERYWQWYDRLWAYAWQ 344 (402)
T ss_dssp HHHHHHBCTTTCSBCSEECT-TSCEEECCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_pred HHHHhcccCCCCcEEEEEcC-CCCeeeCCcceeHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 11 11111000 000 000 0001111247789999999999999999999988753
No 19
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A
Probab=97.72 E-value=0.00047 Score=74.74 Aligned_cols=226 Identities=11% Similarity=-0.009 Sum_probs=122.5
Q ss_pred CchHHHHHHHHHHHHHHHhhhhCCCceee-ccCCch-hhhhhccCCCcccccchHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 005721 6 HNESLKEKMSAVVSALSACQKEIGSGYLS-AFPTEQ-FDRLEALIPVWAPYYTIHKILAGLLDQYTYADNAEALRMTTWM 83 (681)
Q Consensus 6 ~D~~L~~k~~~~V~~l~~~Q~~~~dGYl~-~~~~~~-~~~~~~~~~~W~pyy~~HkI~aGLld~y~~tG~~~aL~va~~~ 83 (681)
..++++++++.+++.|...++ .+|.+. .+++.. .+. ..-..| -|..+ ..+.||...|+.||+++.++.+.+.
T Consensus 23 ~~~~~~~~l~~~~~~l~~~~~--~~~~f~~~~~~~~~~d~--k~~~~W-~Wt~G-~~~~gl~~~ye~Tgd~~y~~~a~~~ 96 (382)
T 3pmm_A 23 ARSELQALIRNVTQNLVNIKD--ESGQFLLRLDDGRVIDT--KGWAGW-EWTHG-VGLYGIYQYYQQTGDIEMRDIIDRW 96 (382)
T ss_dssp CHHHHHHHHHHHHHHHHHCCC--TTCTTCEECTTSCEECS--SSTTSC-SHHHH-HHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhccC--ccccccccCCccccccC--CCCcCc-cccHH-HHHHHHHHHHHHHCCHHHHHHHHHH
Confidence 456899999999999988877 555432 222111 000 011112 12233 3567888999999999999999987
Q ss_pred HHHHHHHhhhhhhccccccccccccccccchHHHHHHHHHhcCCHHHHHHHhhcccc---ccchhhhhcCCCCCCCccc-
Q 005721 84 VEYFYNRVQNVIKKYSIERHWQTLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDKP---CFLGLLALQADDISGFHSN- 159 (681)
Q Consensus 84 ad~~~~~~~~~~~~~~~~~~~~~l~~E~GGmne~L~~LY~~TGd~~yL~lA~~f~~~---~~~~~l~~~~D~l~g~Han- 159 (681)
.+.+... +.... +-..+.+-.+|.+||++|||++|++.|..+.+. .+......+ -.|..
T Consensus 97 ~~~~~~~------~~~~~------n~D~~~~~~~l~~lY~~Tgd~~Yl~~a~~~ad~L~~~~~r~~~Gg-----f~~~~~ 159 (382)
T 3pmm_A 97 FADRFAE------GATTK------NVNTMAPFLTLAYRFEETGRMAYLPWLESWAEWAMHEMPRTEQGG-----MQHMTL 159 (382)
T ss_dssp HHHHHHH------CCCCC------CTTTTTTHHHHHHHHHHHCCGGGHHHHHHHHHHHHHTSCBCGGGC-----BCCCCS
T ss_pred HHHHHcC------CCCcC------cccchHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhCCCCcCCC-----eeeecC
Confidence 7754321 11110 111222335789999999999999998765321 111111110 01210
Q ss_pred ---Ccccc-----ch---HHHHHHHHhCChHHHHHHHHHHHHhhcccee--eecCCCCCCCCCCCcccccCCCCCcccch
Q 005721 160 ---THIPI-----VI---GSQMRYEVTGDQLHKTISMFFMDIVNSSHTY--ATGGTSVGEFWSDPKRLASNLDSNTEESC 226 (681)
Q Consensus 160 ---thiP~-----~~---G~a~~Y~~TGd~~y~~aa~~f~d~v~~~h~y--~tGG~s~~E~f~~p~~l~~~l~~~~~EtC 226 (681)
..-.+ .+ -.+..|++|||+.|++.|..-++...+ |.+ .||-.--+-.+. .. ....+.|
T Consensus 160 ~~~~~~~~WiDgl~M~~p~La~~~~~tgd~~y~d~A~~q~~~~~~-~l~D~~tGl~~h~~~~~-----~~---~~~~~~~ 230 (382)
T 3pmm_A 160 AEENHQQMWDDTLMMTVLPLAKIGKLLNRPQYVEEATYQFLLHVQ-NLMDRETGLWFHGWNYE-----GR---HNFARAR 230 (382)
T ss_dssp SCCCTTEEETTHHHHTHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HHBCTTTSCBCSEEETT-----TT---BCTTCCC
T ss_pred CCCCCCcEEecchhhhHHHHHHHHHHHCCHHHHHHHHHHHHHHHH-HccCCCCCCeeeeccCC-----CC---CCCCcce
Confidence 00111 12 246779999999999877655555543 343 223211100000 00 0112232
Q ss_pred -------hhHHHHHHHHHH-h--cccCCchhHHHHHHHHhhhcccccC
Q 005721 227 -------TTYNMLKVSRHL-F--RWTKEIAYADYYERSLTNGVLGIQR 264 (681)
Q Consensus 227 -------as~nmlkl~~~L-f--~~tgd~~YaD~~EralyN~ila~q~ 264 (681)
..+++..+.+.| + ..+++.+|.+.+++.+ ++++..|+
T Consensus 231 WaRG~gW~~~gl~~~l~~l~~p~~~~~~~~~~~~~~~~a-~~~~~~q~ 277 (382)
T 3pmm_A 231 WARGNSWLTMVIPDFLELVDLPEGNAVRRYLITVLDAQI-AALAECQD 277 (382)
T ss_dssp BHHHHHHHHHHHHHHHHHHCCCTTCHHHHHHHHHHHHHH-HHHHHHCC
T ss_pred ecccccHHHHHHHHHHHhhcCCcchhhHHHHHHHHHHHH-HHHHHcCC
Confidence 335555555543 1 1244567778887766 78888886
No 20
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=97.69 E-value=0.00025 Score=76.71 Aligned_cols=257 Identities=9% Similarity=-0.081 Sum_probs=139.7
Q ss_pred CCchHHHHHHHHHHHHHHHhh-hhCCC-ceeeccCCchhhhhhccCCCcccccchHHHHHHHHHHHHHcCCHHHHHHHHH
Q 005721 5 THNESLKEKMSAVVSALSACQ-KEIGS-GYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQYTYADNAEALRMTTW 82 (681)
Q Consensus 5 t~D~~L~~k~~~~V~~l~~~Q-~~~~d-GYl~~~~~~~~~~~~~~~~~W~pyy~~HkI~aGLld~y~~tG~~~aL~va~~ 82 (681)
++++++++.++..++.|.+.- ...+. |+....... .+... .-...|..=.+..+++++|++||++++++.+.+
T Consensus 75 ~~~~~~l~~A~~~~~fl~~~~~d~~gg~g~~~s~d~d----g~~~~-~~~~lyd~af~~~a~~~~~~atgd~~~~~~A~~ 149 (402)
T 1fp3_A 75 FHRPELLDAAKAGGEFLLRHARVAPPEKKCAFVLTRD----GRPVK-VQRSIFSECFYTMAMNELWRVTAEARYQSEAVD 149 (402)
T ss_dssp GCCHHHHHHHHHHHHHHHHHTBSSTTSCCBCSEECTT----SCEEE-CCSSSHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHhccCcCCCCceEEEECCC----CCccc-cccchHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 489999999999999999874 31122 666443210 00000 001122233356678899999999999999999
Q ss_pred HHHHHHHHhh-hhhhccccc--cccccccccccc-hH--HHHHH---HHHhcCCHHHHHHHhhc----cccccchhhhh-
Q 005721 83 MVEYFYNRVQ-NVIKKYSIE--RHWQTLNEEAGG-MN--DVLYK---LFCITQDPKHLMLAHLF----DKPCFLGLLAL- 148 (681)
Q Consensus 83 ~ad~~~~~~~-~~~~~~~~~--~~~~~l~~E~GG-mn--e~L~~---LY~~TGd~~yL~lA~~f----~~~~~~~~l~~- 148 (681)
+.+++.+.+. .. .+.-.. .-|.... ...+ |. +++.. ||.+|+++ |++.|+.. ... +.+...
T Consensus 150 l~~~~~~~~~d~~-~G~f~~~~~~~~~~~-~~~~~m~~~~~~l~l~~l~~~~~~~-~~~~a~~~~~~~~~~--~~~~~~~ 224 (402)
T 1fp3_A 150 MMDQIVHWVREDP-SGLGRPQLPGAVASE-SMAVPMMLLCLVEQLGEEDEELAGR-YAQLGHWCARRILQH--VQRDGQA 224 (402)
T ss_dssp HHHHHHHHHHTCG-GGGCCCCCTTSCCEE-ETHHHHHHHHHHHHHHTTCHHHHHH-THHHHHHHHHHHHTT--EETTTTE
T ss_pred HHHHHHHHhccCC-CcccCccccCccCCC-CcchHHHHHHHHHHHHHHHHhcCcH-HHHHHHHHHHHHHHH--hCcCCCe
Confidence 9999988764 21 111000 0011110 0011 11 45666 77888655 88776652 222 111100
Q ss_pred ---cCCCCCCCc-ccCc-cccchH--------HHHHHHHhCChHHHHHHHHHHHHh-hccceee-e-cCCCCCCCCCCCc
Q 005721 149 ---QADDISGFH-SNTH-IPIVIG--------SQMRYEVTGDQLHKTISMFFMDIV-NSSHTYA-T-GGTSVGEFWSDPK 212 (681)
Q Consensus 149 ---~~D~l~g~H-anth-iP~~~G--------~a~~Y~~TGd~~y~~aa~~f~d~v-~~~h~y~-t-GG~s~~E~f~~p~ 212 (681)
.-|. .+.. .+.. -++.-| .+..++++||+.|+++|+...+.+ .+ +++- - ||.--.-.+. .
T Consensus 225 ~~e~~d~-dw~~~~~~~g~~~~pgh~ie~~wlL~~a~~~~~~~~~l~~A~~~~~~~~~~-~~~d~~~gg~~~~~~~~--g 300 (402)
T 1fp3_A 225 VLENVSE-DGEELSGCLGRHQNPGHALEAGWFLLRHSSRSGDAKLRAHVIDTFLLLPFR-SGWDADHGGLFYFQDAD--G 300 (402)
T ss_dssp ECSEEET-TSCBCCHHHHHEECHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTHHHHH-HHBCTTTCSBCSCEETT--S
T ss_pred EEEEECC-CCCccCCCCCCCCCCCcHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHH-HhccCCCCCEEEeecCC--C
Confidence 0000 0000 0000 002223 445589999999999999988888 64 4432 2 4432110110 1
Q ss_pred ccccCCCCCcccchhhHHHHHHHHHHhcccCCchhHHHHHHHHhhhccccc-CCCCCCeEEEecC
Q 005721 213 RLASNLDSNTEESCTTYNMLKVSRHLFRWTKEIAYADYYERSLTNGVLGIQ-RGTEPGVMIYLLP 276 (681)
Q Consensus 213 ~l~~~l~~~~~EtCas~nmlkl~~~Lf~~tgd~~YaD~~EralyN~ila~q-~~~~~g~~~Y~~p 276 (681)
.....+.......+...+++.-+-.|++.|||.+|.+.+++.. +-+.... ++..++.|.+..+
T Consensus 301 ~~~~~l~d~~~~~W~qaea~~a~l~ly~~tgd~~yl~~a~~~~-~~~~~~f~D~~~G~w~~~~~~ 364 (402)
T 1fp3_A 301 LCPTQLEWAMKLWWPHSEAMIAFLMGYSESGDPALLRLFYQVA-EYTFRQFRDPEYGEWFGYLNR 364 (402)
T ss_dssp CCCSSTTTTCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH-HHHHHHTBCTTTSSBCCEECT
T ss_pred CccccCcCCCcCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH-HHHHHhCcCCCCCceEeeECC
Confidence 1111223344455777788888888999999999999988853 4444433 3323344445443
No 21
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A
Probab=97.67 E-value=0.00035 Score=75.63 Aligned_cols=227 Identities=10% Similarity=-0.045 Sum_probs=128.7
Q ss_pred cccCCchHHHHHHHHHHHHHHHhhhhCCCceeeccCCchhhhhhccCCCcc-cccchHH-HHHHHHHHHHHcCCHHHHHH
Q 005721 2 WASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWA-PYYTIHK-ILAGLLDQYTYADNAEALRM 79 (681)
Q Consensus 2 ya~t~D~~L~~k~~~~V~~l~~~Q~~~~dGYl~~~~~~~~~~~~~~~~~W~-pyy~~Hk-I~aGLld~y~~tG~~~aL~v 79 (681)
|..|+|++.++.+....+.|+..=. ...|++-.... + ....|. +..--.+ .+..|..+++.+|+++.+++
T Consensus 101 y~ltg~~~~~~~~~~aA~~L~~r~~-~~~g~i~sw~~-----~--~~~~~~~~~iID~mmni~~L~~A~~~~gd~~y~~~ 172 (377)
T 2ahf_A 101 WIVEKDESARKLALDAADVLMRRWR-ADAGIIQAWGP-----K--GDPENGGRIIIDCLLNLPLLLWAGEQTGDPEYRRV 172 (377)
T ss_dssp HHHHCCHHHHHHHHHHHHHHHTTEE-TTTTEECCBSS-----T--TCTTTTTEEEGGGGGGHHHHHHHHHHHCCTHHHHH
T ss_pred HHHhCCHHHHHHHHHHHHHHHHhCC-CCCCeEEeccC-----C--CCCCCCceEEechHHHHHHHHHHHHHhCCHHHHHH
Confidence 5578999999999999998875433 13377766431 0 011121 1110011 13466678899999999999
Q ss_pred HHHHHHHHHHHhhhh----hhccc----cc------ccccccccc---c--cchHHHHHHHHHhcCCHHHHHHHhhccc-
Q 005721 80 TTWMVEYFYNRVQNV----IKKYS----IE------RHWQTLNEE---A--GGMNDVLYKLFCITQDPKHLMLAHLFDK- 139 (681)
Q Consensus 80 a~~~ad~~~~~~~~~----~~~~~----~~------~~~~~l~~E---~--GGmne~L~~LY~~TGd~~yL~lA~~f~~- 139 (681)
|++.++.+.+.+-+. .+... .. .++..++.. + +-+..++..||+.|+|++||+.|+.+.+
T Consensus 173 A~~~a~~~l~~~~r~dgs~~h~~~~D~~tG~~~~~~t~qG~~dds~WaRGqAw~i~gl~~ly~~T~d~~yL~~A~~la~~ 252 (377)
T 2ahf_A 173 AEAHALKSRRFLVRGDDSSYHTFYFDPENGNAIRGGTHQGNTDGSTWTRGQAWGIYGFALNSRYLGNADLLETAKRMARH 252 (377)
T ss_dssp HHHHHHHHHHHTBBTTSCBCSEEEECTTTCCEEEEECSSSSSTTSCBHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCcCCCCCeEEEEEeeCCCCCeeeCCCcCCcCCcchhHHHHHHHHHHHHHHHHHHCChHHHHHHHHHHHH
Confidence 999999998865321 00000 00 000001110 0 1134789999999999999999987532
Q ss_pred --ccc------chhhhhcCCCCCCCcccCcccc-----chHHHHHHHHhC-----ChHHHHHHHHHHHHhhccceeeecC
Q 005721 140 --PCF------LGLLALQADDISGFHSNTHIPI-----VIGSQMRYEVTG-----DQLHKTISMFFMDIVNSSHTYATGG 201 (681)
Q Consensus 140 --~~~------~~~l~~~~D~l~g~HanthiP~-----~~G~a~~Y~~TG-----d~~y~~aa~~f~d~v~~~h~y~tGG 201 (681)
..| ++.... +.+.. +...|. +.|..+++++++ +++|+++|....+.+.+...-..|.
T Consensus 253 ~l~~~~~d~~pywd~~~--~~~~~---~~~d~Sa~aiaA~~Ll~L~~~~~~~~~~~~~Y~~~A~~~l~~l~~~y~~~~~~ 327 (377)
T 2ahf_A 253 FLARVPEDGVVYWDFEV--PQEPS---SYRDSSASAITACGLLEIASQLDESDPERQRFIDAAKTTVTALRDGYAERDDG 327 (377)
T ss_dssp HHTTCCTTSSCBSBTTS--CCCTT---SCBCHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHHHHTBCCCCS
T ss_pred HHHhhHHhCCcccccCC--CccCC---CccCCCHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 111 110000 11110 111231 356777889996 6889999999999887532222222
Q ss_pred CCCCCCCCCCcccccCCCCCcccchhhHHHHHHHHHHhcccCC
Q 005721 202 TSVGEFWSDPKRLASNLDSNTEESCTTYNMLKVSRHLFRWTKE 244 (681)
Q Consensus 202 ~s~~E~f~~p~~l~~~l~~~~~EtCas~nmlkl~~~Lf~~tgd 244 (681)
.+.+..-+.-+..+. .....+|..|+--++.+-|.++.++
T Consensus 328 ~~~g~L~h~~~~~~~---~~~~d~~~~ygDy~~~Eal~r~~~~ 367 (377)
T 2ahf_A 328 EAEGFIRRGSYHVRG---GISPDDYTIWGDYYYLEALLRLERG 367 (377)
T ss_dssp SCCCSBSCBCSBTTT---TBSSSBCBHHHHHHHHHHHHHHHHC
T ss_pred CCCeEEecccccCCC---CCCCCcCccHHHHHHHHHHHHHHcC
Confidence 333322222121221 2246678888888888887777654
No 22
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=97.52 E-value=0.00078 Score=73.35 Aligned_cols=230 Identities=10% Similarity=-0.010 Sum_probs=129.6
Q ss_pred cccCCchHHHHHHHHHHHHHHHhhhhCCCceeeccCCchhhhhhccCCCcccccchHHHHHHHHHHHHHcCCHHHHHHHH
Q 005721 2 WASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQYTYADNAEALRMTT 81 (681)
Q Consensus 2 ya~t~D~~L~~k~~~~V~~l~~~Q~~~~dGYl~~~~~~~~~~~~~~~~~W~pyy~~HkI~aGLld~y~~tG~~~aL~va~ 81 (681)
|..|+|++.++.+....+.|+..=+ -..|++.+.... -+.. + ..+|-- +.+ -+.+|..+++.+|+++.+++|+
T Consensus 127 y~ltg~~~~~~~~~~aA~~L~~r~~-~~~g~iqsw~~~-~~~~-~-~~~iID-~~m--ni~~L~~A~~~~gd~~y~~~A~ 199 (397)
T 2zzr_A 127 YRINGDVKALEATIKAADKLMERYQ-EKGGFIQAWGEL-GYKE-H-YRLIID-CLL--NIQLLFFAYEQTGDEKYRQVAV 199 (397)
T ss_dssp HHHHCCHHHHHHHHHHHHHHHTTEE-TTTTEECCSSST-TCGG-G-CEEETT-HHH--HTHHHHHHHHHHCCHHHHHHHH
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHhC-cCCCEEEecccC-CCCC-C-Cceeec-hHh--HHHHHHHHHHHhCCHHHHHHHH
Confidence 5568999999999999999965432 145777765320 0000 0 011110 100 1245667889999999999999
Q ss_pred HHHHHHHHHhhhh----hhccc----ccc------cccccccc---c--cchHHHHHHHHHhcCCHHHHHHHhhcccccc
Q 005721 82 WMVEYFYNRVQNV----IKKYS----IER------HWQTLNEE---A--GGMNDVLYKLFCITQDPKHLMLAHLFDKPCF 142 (681)
Q Consensus 82 ~~ad~~~~~~~~~----~~~~~----~~~------~~~~l~~E---~--GGmne~L~~LY~~TGd~~yL~lA~~f~~~~~ 142 (681)
+.++.+.+.+-+. ..... ... ++..++.. + .-+..++..||+.|||++||++|+.+.+- +
T Consensus 200 ~ha~~~l~~~~r~dgs~~h~~~~d~~~G~~~~~~t~qGy~dds~WaRGqAw~i~gl~~lY~~T~d~~yL~~A~~la~~-~ 278 (397)
T 2zzr_A 200 NHFYASANNVVRDDSSAFHTFYFDPETGEPLKGVTRQGYSDESSWARGQAWGIYGIPLSYRKMKDYQQIILFKGMTNY-F 278 (397)
T ss_dssp HHHHHHHHHTBCTTSCBCSEEEECTTTCCEEEEECTTSSSTTSCBHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH-H
T ss_pred HHHHHHHHhCcCCCCCeEEEEEeeCCCCCcccCCcccccCcchhhHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH-H
Confidence 9999998765321 00000 000 01001000 0 11347899999999999999999865321 0
Q ss_pred chhhhhcCCCCCCCcc-cCcc------c-----cchHHHHHHHHhCC---hH--HHHHHHHHHHHhhccceeeecCCCCC
Q 005721 143 LGLLALQADDISGFHS-NTHI------P-----IVIGSQMRYEVTGD---QL--HKTISMFFMDIVNSSHTYATGGTSVG 205 (681)
Q Consensus 143 ~~~l~~~~D~l~g~Ha-nthi------P-----~~~G~a~~Y~~TGd---~~--y~~aa~~f~d~v~~~h~y~tGG~s~~ 205 (681)
+..+ ..|-.+-++. ...+ | .+.|..+++++|++ ++ |+++|....+.+.....-..|..+.+
T Consensus 279 l~~~--~~d~~pywdt~~~~~~~~~~D~Sa~aiaA~~Ll~L~~~~~~~~~~~~~Y~~~A~~~l~~l~~~y~~~~~~~~~g 356 (397)
T 2zzr_A 279 LNRL--PEDKVSYWDLIFTDGSGQPRDTSATATAVCGIHEMLKYLPEVDPDKETYKYAMHTMLRSLIEQYSNNELIAGRP 356 (397)
T ss_dssp HHTC--CTTSCCBSBTTCCTTSCCCBCHHHHHHHHHHHHHHHTTSCTTCTTHHHHHHHHHHHHHHHHHHTBCCCCCTTCC
T ss_pred HHhh--HHhCCccccCCCCCCCCCcCCCCHHHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHHHHhccCCCCCCc
Confidence 0000 0011100110 0011 2 13567778899987 77 99999999888875322222323322
Q ss_pred CCCCCCcccccCCCCCcccchhhHHHHHHHHHHhcccCC
Q 005721 206 EFWSDPKRLASNLDSNTEESCTTYNMLKVSRHLFRWTKE 244 (681)
Q Consensus 206 E~f~~p~~l~~~l~~~~~EtCas~nmlkl~~~Lf~~tgd 244 (681)
.--+.-+..+ .......|.+|+--++.+-|.++.++
T Consensus 357 lL~h~~~~~~---~~~~~d~~~~~gDYy~~Eal~r~~~~ 392 (397)
T 2zzr_A 357 LLLHGVYSWH---SGKGVDEGNIWGDYYYLEALIRFYKD 392 (397)
T ss_dssp SBCCEEEETT---TTEEEEECBHHHHHHHHHHHHHHHSC
T ss_pred eeeeceeeCC---CCCCCCCCcchHHHHHHHHHHHHhcC
Confidence 2211111112 13467788888888888888887764
No 23
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.39 E-value=0.00042 Score=76.50 Aligned_cols=231 Identities=12% Similarity=0.101 Sum_probs=133.4
Q ss_pred cccCCchHHHHHHHHHHHHHHHh------hhhCCCceeeccCCchhhhhhccCCCcccccchHHHHHHHHHHHHHcCCHH
Q 005721 2 WASTHNESLKEKMSAVVSALSAC------QKEIGSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQYTYADNAE 75 (681)
Q Consensus 2 ya~t~D~~L~~k~~~~V~~l~~~------Q~~~~dGYl~~~~~~~~~~~~~~~~~W~pyy~~HkI~aGLld~y~~tG~~~ 75 (681)
|..|+|+++++.+++.++.|.+. |.. .+|.+..- +.+... .....- | +. +..+|++.|+.|++++
T Consensus 95 y~~Tgd~kY~~ya~~~~dfi~~~~p~~~~~~~-~~G~l~~~---~r~~~~-~~~LDD--~-g~-~~~~Li~lY~~T~d~~ 165 (445)
T 3k11_A 95 AETTGDKRYTDYVQNRFRFLAEVAPHFKRVYE-EKGKTDSQ---LLQILT-PHALDD--A-GA-VCTAMIKLRLKDESLP 165 (445)
T ss_dssp HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HHSCCCHH---HHHHHS-CCSGGG--T-HH-HHHHHHHHHHHCTTCC
T ss_pred HHHHCCHHHHHHHHHHHHHHHhccchhhhhhh-ccCCeecc---cccccC-CCcchh--H-HH-HHHHHHHHHHhcCCHH
Confidence 67899999999999999987753 110 34554320 001000 000000 1 22 5577889999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhhhc-c---c--cccccccccccccchH-HHHHHHHHhcCCHH--HHHHHhh-cc--ccccc
Q 005721 76 ALRMTTWMVEYFYNRVQNVIKK-Y---S--IERHWQTLNEEAGGMN-DVLYKLFCITQDPK--HLMLAHL-FD--KPCFL 143 (681)
Q Consensus 76 aL~va~~~ad~~~~~~~~~~~~-~---~--~~~~~~~l~~E~GGmn-e~L~~LY~~TGd~~--yL~lA~~-f~--~~~~~ 143 (681)
.++++...+||+.+++.+...+ + . ..++| +.+-+ |+ ..|++++.+|||++ |++.|.+ |. ...++
T Consensus 166 yl~~a~~~ad~L~~~~pRt~~Ggf~h~~~~~~q~W--iD~ly--M~~pfla~~~~~tgd~~~~y~d~A~~q~~~~~~~l~ 241 (445)
T 3k11_A 166 VDGLIQNYFDFIINKEYRLADGTFARNRPQRNTLW--LDDMF--MGIPAVAQMSRYDKEAKNKYLAEAVKQFLQFADRMF 241 (445)
T ss_dssp CHHHHHHHHHHHHHTSCBCTTCCBCBCSSSTTEEE--THHHH--HHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHE
T ss_pred HHHHHHHHHHHHHHcCCCCCCCceeecCCCCCceE--ecchh--hHHHHHHHHHHHHCCcchHHHHHHHHHHHHHHHhcc
Confidence 9999999999999876431110 0 0 01222 11111 55 57889999999999 9998864 21 11222
Q ss_pred hhhhhcCCCCCCCcccCc-----ccc---------chHHHHHHHH-----hCChHHHHHHHHHHHHhhccceeeecCCCC
Q 005721 144 GLLALQADDISGFHSNTH-----IPI---------VIGSQMRYEV-----TGDQLHKTISMFFMDIVNSSHTYATGGTSV 204 (681)
Q Consensus 144 ~~l~~~~D~l~g~Hanth-----iP~---------~~G~a~~Y~~-----TGd~~y~~aa~~f~d~v~~~h~y~tGG~s~ 204 (681)
++... | ..|..++ -+. +.|.++.++. ++.+.+++..+..-+-+.++.- .+|
T Consensus 242 D~~tG----L-~~Hg~~~~~~~~~~~~WaRGnGW~~~gl~~~l~~lp~~~~~r~~l~~~~~~~a~~l~~~Q~-~~G---- 311 (445)
T 3k11_A 242 IPEKG----L-YRHGWVESSTDHPAFCWARANGWALLTACELLDVLPEDYPQRPKVMDYFRAHVRGVTALQS-GEG---- 311 (445)
T ss_dssp ETTTT----E-ECSEEETTCSSCCCCCBHHHHHHHHHHHHHHHHHSCTTCTTHHHHHHHHHHHHHHHHTTCC-TTS----
T ss_pred cCCCC----C-EeeeecCCCCCCCcceecccchHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHHhCC-CCC----
Confidence 22110 0 1222111 121 3677888886 5667788887777777765442 222
Q ss_pred CCCCCCCcccccCCCCCcccchhh----HHHHHHHHHHhcccCCchhHHHHHHHHhhhcccccC
Q 005721 205 GEFWSDPKRLASNLDSNTEESCTT----YNMLKVSRHLFRWTKEIAYADYYERSLTNGVLGIQR 264 (681)
Q Consensus 205 ~E~f~~p~~l~~~l~~~~~EtCas----~nmlkl~~~Lf~~tgd~~YaD~~EralyN~ila~q~ 264 (681)
.|.. +.+. +..+.||-+| |.|++..+.-+ -....|.+..||++ ++++...+
T Consensus 312 --~W~~---vld~-~~~y~EsSaTAmfaygllkgvr~G~--Ld~~~Y~~~A~ka~-~~L~~~i~ 366 (445)
T 3k11_A 312 --FWHQ---LLDC-NDSYLETSATAIYVYCLAHAINKGW--IDAIAYGPVAQLGW-HAVAGKIN 366 (445)
T ss_dssp --CEES---BTTC-TTSCEEHHHHHHHHHHHHHHHHHTS--SCHHHHHHHHHHHH-HHHHTTBC
T ss_pred --chhh---ccCC-CCCCCCccHHHHHHHHHHHHHHcCC--CCHHHHHHHHHHHH-HHHHHhCC
Confidence 3321 1111 3455565444 77888776532 22246999999876 67776544
No 24
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=97.01 E-value=0.0019 Score=70.61 Aligned_cols=185 Identities=11% Similarity=0.050 Sum_probs=106.2
Q ss_pred cccCCchHHHHHHHHHHHHHHHhhhhC-CCceeeccCCchhhhhhccCCCcccccchHH-HHHHHHHHHHHcCCHHHHHH
Q 005721 2 WASTHNESLKEKMSAVVSALSACQKEI-GSGYLSAFPTEQFDRLEALIPVWAPYYTIHK-ILAGLLDQYTYADNAEALRM 79 (681)
Q Consensus 2 ya~t~D~~L~~k~~~~V~~l~~~Q~~~-~dGYl~~~~~~~~~~~~~~~~~W~pyy~~Hk-I~aGLld~y~~tG~~~aL~v 79 (681)
|..|+|++.++.+.++++.+.+.=... ..||..+.+.. .+..+. . ...+.|. +..+++..|.++|+++.++.
T Consensus 123 ~~~tg~~~~l~~a~~~~~~l~~~~~d~~~Ggf~~~~d~d-~~~~~~-~----~~~n~~m~~~~al~~l~~~tgd~~~~~~ 196 (421)
T 2zbl_A 123 AVTTGHPEARKLLDYTIEVIEKYFWSEEEQMCLESWDEA-FSQTED-Y----RGGNANMHAVEAFLIVYDVTHDKKWLDR 196 (421)
T ss_dssp HHTTTCTTHHHHHHHHHHHHHHHTEETTTTEECCEECTT-SCSBCS-C----EEHHHHHHHHHHHHHHHHTTCCTHHHHH
T ss_pred HHHhCCccHHHHHHHHHHHHHHHhccCCCCCeeeeecCC-CCcccc-c----CCCcHHHHHHHHHHHHHHhhCCHHHHHH
Confidence 567999999999999999888743211 34777665421 111111 0 1223332 34566789999999999999
Q ss_pred HHHHHHHHHHHhhhhh-hccc--cccccccccc---------------cccc-h--HHHHHHHHHhc---CC--H-HHHH
Q 005721 80 TTWMVEYFYNRVQNVI-KKYS--IERHWQTLNE---------------EAGG-M--NDVLYKLFCIT---QD--P-KHLM 132 (681)
Q Consensus 80 a~~~ad~~~~~~~~~~-~~~~--~~~~~~~l~~---------------E~GG-m--ne~L~~LY~~T---Gd--~-~yL~ 132 (681)
+.++++.+..++.+.. ..+. ...-|..+.+ +.|= + ...|.++|+++ || + +|++
T Consensus 197 A~~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~dd~~~r~~~~~~~pgh~iE~~wlLl~~~~~~~~~~~~~~~~~l~ 276 (421)
T 2zbl_A 197 ALRIASVIIHDVARNGDYRVNEHFDSQWNPIRDYNKDNPAHRFRAYGGTPGAWIEWGRLMLHLHAALEARFETPPAWLLE 276 (421)
T ss_dssp HHHHHHHHCCCCCGGGTTCCCCEECTTSCBCTTTTTTSTTCSSSCSSBCHHHHHHHHHHHHHHHHHHHHTTCCCCTHHHH
T ss_pred HHHHHHHHHHHhccCCCCchhhhcCCccccchhccCCCcccccccCCCCCChHHHHHHHHHHHHHHcccccccchHHHHH
Confidence 9999999876543210 0010 0111222211 1221 1 24678999999 66 6 8999
Q ss_pred HHhhcccc---ccchhh-hhc----CCCCC-----CCcccCccccchHHHHHHHHhCChHHHHHHHHHHHHhh
Q 005721 133 LAHLFDKP---CFLGLL-ALQ----ADDIS-----GFHSNTHIPIVIGSQMRYEVTGDQLHKTISMFFMDIVN 192 (681)
Q Consensus 133 lA~~f~~~---~~~~~l-~~~----~D~l~-----g~HanthiP~~~G~a~~Y~~TGd~~y~~aa~~f~d~v~ 192 (681)
.|..+.+. .+.++. ..+ .|.-. ....-.|...+.+++.+|++|||+.|++.++..|+.+.
T Consensus 277 ~A~~l~~~~~~~g~d~~~~GG~~~~~~~~g~~~~~~k~~w~~aea~~all~l~~~tgd~~yl~~a~~~~~~~~ 349 (421)
T 2zbl_A 277 DAKGLFHATIRDAWAPDGADGFVYSVDWDGKPIVRERVRWPIVEAMGTAYALYTLTDDSQYEEWYQKWWDYCI 349 (421)
T ss_dssp HHHHHHHHHHHHHBSCSSSSSBCSCBCTTSCBSCCCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCCcEEEeecCCCCccCCCcccHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 99765321 111111 000 00000 00000111124678899999999999999999998875
No 25
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus}
Probab=96.98 E-value=0.018 Score=65.41 Aligned_cols=253 Identities=12% Similarity=0.027 Sum_probs=132.2
Q ss_pred hHHHHHHHHHHHHHHHhhhhCCCceeeccCCchhhhhhc------------cCCCccccc-----chH-HHHHHHHHHHH
Q 005721 8 ESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEA------------LIPVWAPYY-----TIH-KILAGLLDQYT 69 (681)
Q Consensus 8 ~~L~~k~~~~V~~l~~~Q~~~~dGYl~~~~~~~~~~~~~------------~~~~W~pyy-----~~H-kI~aGLld~y~ 69 (681)
+.+++.+..-+|.|++||. ++|++-. .+.+.|.. ......+.| ++- ...|+|-.+++
T Consensus 190 ~~lldE~rWg~D~llkm~~--~~g~~y~---qVgd~W~~d~~~R~~~~~~~~~~~~~~~y~~~~~~~agl~aAALA~Asr 264 (586)
T 3h7l_A 190 TRLIEEALFGADFLVRMQN--EKGFFYM---TVFDKWSKDTAQREICAYETQLGHKFDDYQAGFRQGGGVAIAALAAASR 264 (586)
T ss_dssp HHHHHHHHHHHHHHHHTBC--TTSCBBC---EEECTTCCCGGGCEEEEEETTTTEEESCCBCCGGGTHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhccc--CCCeEEE---EecCCCCCCCCccccccccCCCCCCCcceecCCCCcHHHHHHHHHHHhc
Confidence 5788888899999999999 8887532 12222211 001111222 111 13344444454
Q ss_pred H-----cCCHHHHHHHHHHHHHHHHHhhhhhhccccccccccccccccchHHHHHHHHHhcCCHHHHHHHhhccc-----
Q 005721 70 Y-----ADNAEALRMTTWMVEYFYNRVQNVIKKYSIERHWQTLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDK----- 139 (681)
Q Consensus 70 ~-----tG~~~aL~va~~~ad~~~~~~~~~~~~~~~~~~~~~l~~E~GGmne~L~~LY~~TGd~~yL~lA~~f~~----- 139 (681)
. .+.++.|+.|++..+|+.+....... ..- .....|+ -+..+..|||+.|||++||+.|..+.+
T Consensus 265 vf~d~~~~a~~~L~aA~~a~~fa~~~~~~y~~----~g~-~~~~De~-~~~WAA~eLy~ATgd~~YL~~a~~~a~~l~~~ 338 (586)
T 3h7l_A 265 LGVHGEYDQQKYRNAAENGYWHLKEHNTQYLN----DGE-ENIIDEY-CALLASVELFKATKETRYLEESRLWAQRLVAR 338 (586)
T ss_dssp SSSCSSSCHHHHHHHHHHHHHHHHHHHHHHST----TSC-CCHHHHH-HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTT
T ss_pred ccCCCCcChHHHHHHHHHHHHHHHhcCccccC----CCC-ccchhHH-HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 4 45679999999999999875433211 100 1122343 235789999999999999999876321
Q ss_pred ------cccchhhhhcCCCCCCCcccCccccchHHHHHHHHhCChHHHHHH----HHHHH---Hhhcc--------ceee
Q 005721 140 ------PCFLGLLALQADDISGFHSNTHIPIVIGSQMRYEVTGDQLHKTIS----MFFMD---IVNSS--------HTYA 198 (681)
Q Consensus 140 ------~~~~~~l~~~~D~l~g~HanthiP~~~G~a~~Y~~TGd~~y~~aa----~~f~d---~v~~~--------h~y~ 198 (681)
..++|..... ..-+..|.....--++..+++.++++|+.+++.+ +...+ .++++ +.|+
T Consensus 339 ~~~~~~~g~~w~~~d~-~~r~~~d~a~~gl~~iaLl~l~~~~~d~~~~~~a~~~i~~~~d~~l~~~~~~~npfg~~~~~~ 417 (586)
T 3h7l_A 339 QMSDEQIQHFWSANQD-GSRPYFHAAEAGLPTIALCEYLAIEDDSVQTESVKCIVNRACEFEIKISNKVTNPFGYPRQYV 417 (586)
T ss_dssp EECCSSCSSEEBSSSS-SSSBCCCTTTTTHHHHHHHHHHHHCCSTTTTHHHHHHHHHHHHHHHHHHHSSCCSSCCCCEEE
T ss_pred ccCCccCCCcCCCccc-CCcccccccccHHHHHHHHHhhhhcCChHHHHHHHHHHHHHhhhhhhhcccccCccccHHHHh
Confidence 1233321100 0111233332211234566778899986443333 33333 12211 1344
Q ss_pred ecCCC-CCCCCCCCcccccCCCCCc-ccchhhHHHHHHHHHHhcccCC----chhHHHHHHHHhhhcccccCCCCCCeEE
Q 005721 199 TGGTS-VGEFWSDPKRLASNLDSNT-EESCTTYNMLKVSRHLFRWTKE----IAYADYYERSLTNGVLGIQRGTEPGVMI 272 (681)
Q Consensus 199 tGG~s-~~E~f~~p~~l~~~l~~~~-~EtCas~nmlkl~~~Lf~~tgd----~~YaD~~EralyN~ila~q~~~~~g~~~ 272 (681)
.+..+ ....|.-|..... ...- .+.=...|...++-....+++| .+|.|.....+ |=|||. +| -.+.
T Consensus 418 ~~~~~~~~~~y~~p~~~~~--~y~WqGsN~~~an~a~~~~~a~~~~~~~~~~~~y~~~a~~ql-dyiLG~-Np---~~~s 490 (586)
T 3h7l_A 418 KGVNESKRDAFFVAHNNES--GYWWQGENARLGSLATMAYLAQPHIASQEIQQQLSVFAQDAL-NWIVGL-NP---YDMC 490 (586)
T ss_dssp CCTTSCCEEESSCCSSSTT--SSCCCCCHHHHHHHHHHHHHSGGGCCCHHHHHHHHHHHHHHH-HHHBTC-ST---TCCB
T ss_pred hhhccccccccccccCCCC--CCeeeChHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHhh-hhhccC-CC---CCCc
Confidence 33221 1223333322100 0112 2333345666667777788998 77888887766 777875 22 2345
Q ss_pred EecCCCC
Q 005721 273 YLLPLAP 279 (681)
Q Consensus 273 Y~~pl~~ 279 (681)
|++-.+.
T Consensus 491 ~v~G~G~ 497 (586)
T 3h7l_A 491 MLDGHGR 497 (586)
T ss_dssp CBTTSSS
T ss_pred cEEeeCC
Confidence 5555543
No 26
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=96.94 E-value=0.0025 Score=68.82 Aligned_cols=175 Identities=11% Similarity=0.047 Sum_probs=98.5
Q ss_pred cccCCchHHHHHHHHHHHHHHHhhhhCCCceeeccCCchhhhhhccCCCccccc--ch--HHHHHHHHH---HHHHcCCH
Q 005721 2 WASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAPYY--TI--HKILAGLLD---QYTYADNA 74 (681)
Q Consensus 2 ya~t~D~~L~~k~~~~V~~l~~~Q~~~~dGYl~~~~~~~~~~~~~~~~~W~pyy--~~--HkI~aGLld---~y~~tG~~ 74 (681)
|..|+|++.++.+.++++.+.+.-...+.|++.+... .|.++- +. |.+. .++. .|..+++
T Consensus 135 ~~atgd~~~~~~A~~l~~~~~~~~~d~~~G~f~~~~~-----------~~~~~~~~~~~m~~~~-~~l~l~~l~~~~~~- 201 (402)
T 1fp3_A 135 WRVTAEARYQSEAVDMMDQIVHWVREDPSGLGRPQLP-----------GAVASESMAVPMMLLC-LVEQLGEEDEELAG- 201 (402)
T ss_dssp HHHHCCHHHHHHHHHHHHHHHHHHHTCGGGGCCCCCT-----------TSCCEEETHHHHHHHH-HHHHHHTTCHHHHH-
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHhccCCCcccCcccc-----------CccCCCCcchHHHHHH-HHHHHHHHHHhcCc-
Confidence 6789999999999999999988653125677643221 122221 22 3332 3334 4555544
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhcc---cccccccccc------ccccchHH---HHHHHHHhcCCHHHHHHHhhcccccc
Q 005721 75 EALRMTTWMVEYFYNRVQNVIKKY---SIERHWQTLN------EEAGGMND---VLYKLFCITQDPKHLMLAHLFDKPCF 142 (681)
Q Consensus 75 ~aL~va~~~ad~~~~~~~~~~~~~---~~~~~~~~l~------~E~GGmne---~L~~LY~~TGd~~yL~lA~~f~~~~~ 142 (681)
+.++.+.++++.+..+ ...-.+. ....-|.... .+.|=+.+ .|.++++++||++|++.|+..-+..
T Consensus 202 ~~~~~a~~~~~~~~~~-~~~~~~~~~e~~d~dw~~~~~~~g~~~~pgh~ie~~wlL~~a~~~~~~~~~l~~A~~~~~~~- 279 (402)
T 1fp3_A 202 RYAQLGHWCARRILQH-VQRDGQAVLENVSEDGEELSGCLGRHQNPGHALEAGWFLLRHSSRSGDAKLRAHVIDTFLLL- 279 (402)
T ss_dssp HTHHHHHHHHHHHHTT-EETTTTEECSEEETTSCBCCHHHHHEECHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTHH-
T ss_pred HHHHHHHHHHHHHHHH-hCcCCCeEEEEECCCCCccCCCCCCCCCCCcHHHHHHHHHHHHHHcCChHHHHHHHHHHHHH-
Confidence 4677888888777654 2110000 0011132110 11120223 6888999999999999997643211
Q ss_pred chhhhhcCCCC-CC-Ccc---cCccc---------------cchHHHHHHHHhCChHHHHHHHHHHHHhhc
Q 005721 143 LGLLALQADDI-SG-FHS---NTHIP---------------IVIGSQMRYEVTGDQLHKTISMFFMDIVNS 193 (681)
Q Consensus 143 ~~~l~~~~D~l-~g-~Ha---nthiP---------------~~~G~a~~Y~~TGd~~y~~aa~~f~d~v~~ 193 (681)
++..+-|.- .+ .|. ..+.+ .+.|++.+|++|||+.|++.++..|+.+.+
T Consensus 280 --~~~~~~d~~~gg~~~~~~~~g~~~~~l~d~~~~~W~qaea~~a~l~ly~~tgd~~yl~~a~~~~~~~~~ 348 (402)
T 1fp3_A 280 --PFRSGWDADHGGLFYFQDADGLCPTQLEWAMKLWWPHSEAMIAFLMGYSESGDPALLRLFYQVAEYTFR 348 (402)
T ss_dssp --HHHHHBCTTTCSBCSCEETTSCCCSSTTTTCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_pred --HHHHhccCCCCCEEEeecCCCCccccCcCCCcCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 011111100 01 111 11111 257899999999999999999999998764
No 27
>1nxc_A Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; glycosidase, structural genomics, PSI, protein initiative; HET: NAG BMA MAN; 1.51A {Mus musculus} SCOP: a.102.2.1
Probab=96.78 E-value=0.01 Score=66.07 Aligned_cols=195 Identities=12% Similarity=0.103 Sum_probs=112.6
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhhhhhcccc-----------ccccc----cccccccchHHHHHHHHHh
Q 005721 60 ILAGLLDQYTYADNAEALRMTTWMVEYFYNRVQNVIKKYSI-----------ERHWQ----TLNEEAGGMNDVLYKLFCI 124 (681)
Q Consensus 60 I~aGLld~y~~tG~~~aL~va~~~ad~~~~~~~~~~~~~~~-----------~~~~~----~l~~E~GGmne~L~~LY~~ 124 (681)
++-|||.+|.++|++..|+.|+.+||.+..-|... .+.+. ...|. ..-.|.|.+..-+.+|.++
T Consensus 110 ~LGGLLSAy~Lsgd~~lL~kA~dLad~LlpAFdTp-tgiP~~~vnl~~g~~~~~~~~~~~~s~lAe~gsl~LEF~~LS~l 188 (478)
T 1nxc_A 110 FVGGLLSAYYLSGEEIFRKKAVELGVKLLPAFHTP-SGIPWALLNMKSGIGRNWPWASGGSSILAEFGTLHLEFMHLSHL 188 (478)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHHHHGGGGCSS-SSCCCSEEETTTCCEECCTTSGGGCEEHHHHTTCHHHHHHHHHH
T ss_pred hhhhhhhhhhccCCHHHHHHHHHHHHHHHHhhcCC-CCCCcceeecccccCCCCcccCCCCcccccccchhhhHHHHHHH
Confidence 78999999999999999999999999987655321 11110 01121 1123667777788999999
Q ss_pred cCCHHHHHHHhhccccccchhhh-------hcCCCCCCCcccCccccchH---------HHHHHHHhC--ChHHHHHHHH
Q 005721 125 TQDPKHLMLAHLFDKPCFLGLLA-------LQADDISGFHSNTHIPIVIG---------SQMRYEVTG--DQLHKTISMF 186 (681)
Q Consensus 125 TGd~~yL~lA~~f~~~~~~~~l~-------~~~D~l~g~HanthiP~~~G---------~a~~Y~~TG--d~~y~~aa~~ 186 (681)
|||++|.+.|+++.+ .++... ..-|...|...+.++ -+| ..+.|.++| |+.|++.-..
T Consensus 189 TGd~~Y~~~a~~~~~--~l~~~~~~~GL~p~~i~~~tg~~~~~~~--~~Ga~~DS~YEYLlK~~il~g~~d~~~~~m~~~ 264 (478)
T 1nxc_A 189 SGDPVFAEKVMKIRT--VLNKLDKPEGLYPNYLNPSSGQWGQHHV--SVGGLGDSFYEYLLKAWLMSDKTDLEAKKMYFD 264 (478)
T ss_dssp HCCTHHHHHHHHHHH--HHHHSCCGGGCCCSEECTTTCCBCSCEE--CSSTTTHHHHHHHHHHHHHTTTCCHHHHHHHHH
T ss_pred HCChHHHHHHHHHHH--HHHhcCCCCCccccccCCCCCCccCcee--eecCCCchHHHHHHHHHHHcCCchHHHHHHHHH
Confidence 999999999988632 111100 001111121111222 222 455677887 6788888888
Q ss_pred HHHHhhccceeeecCCCCCCCCCCCcccccC-CCCCcccchhhHHHHHHHHHHhcccCCchhHHHHHHH------Hhhhc
Q 005721 187 FMDIVNSSHTYATGGTSVGEFWSDPKRLASN-LDSNTEESCTTYNMLKVSRHLFRWTKEIAYADYYERS------LTNGV 259 (681)
Q Consensus 187 f~d~v~~~h~y~tGG~s~~E~f~~p~~l~~~-l~~~~~EtCas~nmlkl~~~Lf~~tgd~~YaD~~Era------lyN~i 259 (681)
.++.|.+ |+.-.. . .+-.|..... .+. .+....=+|=.-+|+-|.-.++......+|++..++. +|+..
T Consensus 265 a~~~i~~-~l~~~~-~-~~~~~v~~~~-~~~~~~~~~hL~cF~gG~~aLg~~~~~~~~~~~~l~~a~~l~~tC~~~y~~~ 340 (478)
T 1nxc_A 265 AVQAIET-HLIRKS-S-GGLTYIAEWK-GGLLEHKMGHLTCFAGGMFALGADGAPEARAQHYLELGAEIARTCHESYNRT 340 (478)
T ss_dssp HHHHHHH-HTEEEC-T-TSCEEECEEE-TTEEECEEETGGGGHHHHHHHTSTTSCTTCHHHHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHH-HhcccC-C-CCcEEEEecc-CCcccccccchhhhhHHHHHhccccccccchHHHHHHHHHHHHHHHHHHHhc
Confidence 8887764 443210 0 0111100000 000 1233456898889988877666554446677776654 45555
Q ss_pred cccc
Q 005721 260 LGIQ 263 (681)
Q Consensus 260 la~q 263 (681)
..+.
T Consensus 341 ~tgl 344 (478)
T 1nxc_A 341 YVKL 344 (478)
T ss_dssp SSSS
T ss_pred ccCC
Confidence 4443
No 28
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=96.40 E-value=0.023 Score=62.62 Aligned_cols=249 Identities=12% Similarity=0.152 Sum_probs=126.0
Q ss_pred cccCCchHHHHHHHHHHHHHHHhh-----hh-CCCceeeccCCchhh-hhhccC-CCcccccchHHHHHHHHHHHHHcCC
Q 005721 2 WASTHNESLKEKMSAVVSALSACQ-----KE-IGSGYLSAFPTEQFD-RLEALI-PVWAPYYTIHKILAGLLDQYTYADN 73 (681)
Q Consensus 2 ya~t~D~~L~~k~~~~V~~l~~~Q-----~~-~~dGYl~~~~~~~~~-~~~~~~-~~W~pyy~~HkI~aGLld~y~~tG~ 73 (681)
|.....+++++.+|.+++.|.+.- .+ .+.=+++ +.+-..+ .++... ..|. |+.-..+.||...|+.||+
T Consensus 24 ~~~~~~~~i~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--y~~Gv~l~gl~~ay~~Tgd 100 (445)
T 3k11_A 24 YGDLTPEQVKKDIDRVFAYIDKETPARVVDKNTGKVITD-YTAMGDEAQLERGAFRLAS--YEWGVTYSALIAAAETTGD 100 (445)
T ss_dssp CSCCCHHHHHHHHHHHHHHHHHTSCCCEEETTTCCEECC-TTTCCTTEEECCCSSCTTS--HHHHHHHHHHHHHHHHHCC
T ss_pred CCcCCHHHHHHHHHHHHHHHhccCcceeecCCCCceecc-ccccccccccccCCcccCc--cCHHHHHHHHHHHHHHHCC
Confidence 445566789999999999988721 11 0111211 1100000 011111 1111 3444577899999999999
Q ss_pred HHHHHHHHHHHHHHHHHhh---hhhhcc-cccc-c-----cccccccccchHHHHHHHHHhcCCHHHHHHHhhccccccc
Q 005721 74 AEALRMTTWMVEYFYNRVQ---NVIKKY-SIER-H-----WQTLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDKPCFL 143 (681)
Q Consensus 74 ~~aL~va~~~ad~~~~~~~---~~~~~~-~~~~-~-----~~~l~~E~GGmne~L~~LY~~TGd~~yL~lA~~f~~~~~~ 143 (681)
++.++.+.+.++++.+.+. ....+. .... + -..+. -.|-|..+|+++|+.|+|++|++.|....+.
T Consensus 101 ~kY~~ya~~~~dfi~~~~p~~~~~~~~~G~l~~~~r~~~~~~~LD-D~g~~~~~Li~lY~~T~d~~yl~~a~~~ad~--- 176 (445)
T 3k11_A 101 KRYTDYVQNRFRFLAEVAPHFKRVYEEKGKTDSQLLQILTPHALD-DAGAVCTAMIKLRLKDESLPVDGLIQNYFDF--- 176 (445)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHSCCSGG-GTHHHHHHHHHHHHHCTTCCCHHHHHHHHHH---
T ss_pred HHHHHHHHHHHHHHHhccchhhhhhhccCCeecccccccCCCcch-hHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH---
Confidence 9999999999998765321 011100 0000 0 00122 2355678999999999999999998754220
Q ss_pred hhhhhc-CCCCCCC-cccCccc-c-----chH---HHHHHHHhCChH--HHHHHHHHHHHhhcccee--eecCCCCCCCC
Q 005721 144 GLLALQ-ADDISGF-HSNTHIP-I-----VIG---SQMRYEVTGDQL--HKTISMFFMDIVNSSHTY--ATGGTSVGEFW 208 (681)
Q Consensus 144 ~~l~~~-~D~l~g~-HanthiP-~-----~~G---~a~~Y~~TGd~~--y~~aa~~f~d~v~~~h~y--~tGG~s~~E~f 208 (681)
.+... +..-.++ |....-. + .++ .+..+++|||++ |++.+..-+....+ +++ .||-.--+ |
T Consensus 177 -L~~~~pRt~~Ggf~h~~~~~~q~WiD~lyM~~pfla~~~~~tgd~~~~y~d~A~~q~~~~~~-~l~D~~tGL~~Hg--~ 252 (445)
T 3k11_A 177 -IINKEYRLADGTFARNRPQRNTLWLDDMFMGIPAVAQMSRYDKEAKNKYLAEAVKQFLQFAD-RMFIPEKGLYRHG--W 252 (445)
T ss_dssp -HHHTSCBCTTCCBCBCSSSTTEEETHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHH-HHEETTTTEECSE--E
T ss_pred -HHHcCCCCCCCceeecCCCCCceEecchhhHHHHHHHHHHHHCCcchHHHHHHHHHHHHHHH-hcccCCCCCEeee--e
Confidence 00000 0011122 3211111 1 133 355689999999 88766554444433 333 12211000 0
Q ss_pred CCCcccccCCCCCcccch-------hhHHHHHHHHHHhc-ccCCchhHHHHHHHHhhhcccccCCCCCCeE
Q 005721 209 SDPKRLASNLDSNTEESC-------TTYNMLKVSRHLFR-WTKEIAYADYYERSLTNGVLGIQRGTEPGVM 271 (681)
Q Consensus 209 ~~p~~l~~~l~~~~~EtC-------as~nmlkl~~~Lf~-~tgd~~YaD~~EralyN~ila~q~~~~~g~~ 271 (681)
... .....+.| ..++|..+.+.|=. .++...|.+.+++.+ ++++..|+. .|.|
T Consensus 253 ~~~-------~~~~~~~~WaRGnGW~~~gl~~~l~~lp~~~~~r~~l~~~~~~~a-~~l~~~Q~~--~G~W 313 (445)
T 3k11_A 253 VES-------STDHPAFCWARANGWALLTACELLDVLPEDYPQRPKVMDYFRAHV-RGVTALQSG--EGFW 313 (445)
T ss_dssp ETT-------CSSCCCCCBHHHHHHHHHHHHHHHHHSCTTCTTHHHHHHHHHHHH-HHHHTTCCT--TSCE
T ss_pred cCC-------CCCCCcceecccchHHHHHHHHHHHhcccccccHHHHHHHHHHHH-HHHHHhCCC--CCch
Confidence 000 00111222 23445554444332 234566777776665 788888863 4544
No 29
>1dl2_A Class I alpha-1,2-mannosidase; alpha-alpha helix barrel, hydrolase; HET: NAG NDG BMA MAN; 1.54A {Saccharomyces cerevisiae} SCOP: a.102.2.1 PDB: 1g6i_A*
Probab=96.23 E-value=0.028 Score=62.92 Aligned_cols=221 Identities=13% Similarity=0.070 Sum_probs=124.1
Q ss_pred HHHHHHHHHHHHHHHhhhhCCCceeeccCCchhhhhhccCCCcccccchHHHHHHHHHHHHHc------CCHHHHHHHHH
Q 005721 9 SLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQYTYA------DNAEALRMTTW 82 (681)
Q Consensus 9 ~L~~k~~~~V~~l~~~Q~~~~dGYl~~~~~~~~~~~~~~~~~W~pyy~~HkI~aGLld~y~~t------G~~~aL~va~~ 82 (681)
.|++..++.|++|.+.-.=..|+-++- |+. || .++-|||.+|.++ |++..|+.|+.
T Consensus 71 gl~~Ef~~A~~~V~~~l~F~~d~~Vsv-----FET------------tI-R~LGGLLSAy~Ls~~~~~~~d~~lL~kA~d 132 (511)
T 1dl2_A 71 EFEAEIQRSEHWINDVLDFDIDAEVNV-----FET------------TI-RMLGGLLSAYHLSDVLEVGNKTVYLNKAID 132 (511)
T ss_dssp HHHHHHHHHHHHHHHTCCCCCSSEEEH-----HHH------------HH-HHHHHHHHHHHHHHHHTCSCHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHhcCCCCCceech-----hhe------------eh-hhhhhhhhHHHhcccccCCCcHHHHHHHHH
Confidence 577778888888776322112333332 321 22 2789999999999 99999999999
Q ss_pred HHHHHHHHhh-hhhhcccc-----------ccccc---cccccccchHHHHHHHHHhcCCHHHHHHHhhccccccchhhh
Q 005721 83 MVEYFYNRVQ-NVIKKYSI-----------ERHWQ---TLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDKPCFLGLLA 147 (681)
Q Consensus 83 ~ad~~~~~~~-~~~~~~~~-----------~~~~~---~l~~E~GGmne~L~~LY~~TGd~~yL~lA~~f~~~~~~~~l~ 147 (681)
+||.+..-|. .. .+.+. ..+|. ..--|.|.+..-+..|-++|||++|.+.|++..+ .++...
T Consensus 133 LadrLlpAFd~Tp-tgiP~~~vnl~~g~~~~~~~~~~~s~~Ae~gSl~LEF~~LS~LTGd~~Y~~~a~r~~~--~l~~~~ 209 (511)
T 1dl2_A 133 LGDRLALAFLSTQ-TGIPYSSINLHSGQAVKNHADGGASSTAEFTTLQMEFKYLAYLTGNRTYWELVERVYE--PLYKNN 209 (511)
T ss_dssp HHHHHHGGGGSSS-SSCCCSEEETTTCCEECCSSGGGCEEHHHHSSCHHHHHHHHHHHTCHHHHHHHHTTHH--HHHHHH
T ss_pred HHHHHHHhhcCCC-CCCCCceeecccCCCCCCCCCCcccccccccceeeeHHHHHHHHCChHHHHHHHHHHH--HHHhcc
Confidence 9999986665 21 11111 11121 1123667777889999999999999999998632 111110
Q ss_pred -----------hcCCCCCCCcccCccccchH---------HHHHHHHhCChHHHHHHHHHHHHhhccceeeecCCCCCCC
Q 005721 148 -----------LQADDISGFHSNTHIPIVIG---------SQMRYEVTGDQLHKTISMFFMDIVNSSHTYATGGTSVGEF 207 (681)
Q Consensus 148 -----------~~~D~l~g~HanthiP~~~G---------~a~~Y~~TGd~~y~~aa~~f~d~v~~~h~y~tGG~s~~E~ 207 (681)
..-|.-.|...+.++ -+| ..+.|.+++|+.|++.=...++.|.+ |++-... ..+-.
T Consensus 210 ~~~~~~~GL~p~~i~~~tg~~~~~~~--~lGa~~DS~YEYLlK~~il~~d~~y~~m~~~a~~~i~~-~L~~~~~-~~~~~ 285 (511)
T 1dl2_A 210 DLLNTYDGLVPIYTFPDTGKFGASTI--RFGSRGDSFYEYLLKQYLLTHETLYYDLYRKSMEGMKK-HLLAQSK-PSSLW 285 (511)
T ss_dssp THHHHHTTCCBSEECTTTCCBCSCCB--CSSTTTHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH-HTEEECT-TTCCE
T ss_pred cccCCCCCCcceEEcCCCCCccCCee--eecCCCCcHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH-HhccCCC-CCCcE
Confidence 011111121111222 222 46667888999999888888887764 4432110 01101
Q ss_pred CCCCcc--cccCC-CCCcccchhhHHHHHHHHHHhccc---------CCchhHHHHHHHH
Q 005721 208 WSDPKR--LASNL-DSNTEESCTTYNMLKVSRHLFRWT---------KEIAYADYYERSL 255 (681)
Q Consensus 208 f~~p~~--l~~~l-~~~~~EtCas~nmlkl~~~Lf~~t---------gd~~YaD~~Eral 255 (681)
|..... ..+.+ +....=+|=.-+|+-|.- ...+. .+.+|++..++.+
T Consensus 286 ~~~~~~~~~~g~~~~~~~hL~cF~gG~~aLg~-~~~~~~~~a~~~~~~~~~~~~~a~~l~ 344 (511)
T 1dl2_A 286 YIGEREQGLHGQLSPKMDHLVCFMGGLLASGS-TEGLSIHEARRRPFFSKSDWDLAKGIT 344 (511)
T ss_dssp EECBBTTCTTSCCBCEEEGGGGGHHHHHHHHH-HTTCCHHHHTTSTTCCHHHHHHHHHHH
T ss_pred EEEEeecCCCCccccccchhhhchhHHHHhcc-ccCCChhhhhhcccccHHHHHHHHHHH
Confidence 100000 00111 233456899899988876 22222 1235777666654
No 30
>1x9d_A Endoplasmic reticulum mannosyl-oligosaccharide 1, 2-alpha-mannosidase; substrate analogue, glycosyl hydrolase; HET: SMD; 1.41A {Homo sapiens} SCOP: a.102.2.1 PDB: 1fo3_A* 1fo2_A* 1fmi_A
Probab=95.78 E-value=0.077 Score=59.66 Aligned_cols=186 Identities=14% Similarity=0.110 Sum_probs=106.1
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhhhhhcccc-----------ccccc--cccccccchHHHHHHHHHhcC
Q 005721 60 ILAGLLDQYTYADNAEALRMTTWMVEYFYNRVQNVIKKYSI-----------ERHWQ--TLNEEAGGMNDVLYKLFCITQ 126 (681)
Q Consensus 60 I~aGLld~y~~tG~~~aL~va~~~ad~~~~~~~~~~~~~~~-----------~~~~~--~l~~E~GGmne~L~~LY~~TG 126 (681)
++-|||.+|.++|++..|+.|+.+||.+..-|... .+.+. ...|. ..--|.|.+..-+.+|-++||
T Consensus 174 ~LGGLLSAy~Lsgd~~lL~kA~dLadrLlpAFdTp-tgiP~~~vnl~~g~~~~~~~~~~s~lAe~GSl~LEF~~LS~LTG 252 (538)
T 1x9d_A 174 ILGGLLSAYHLSGDSLFLRKAEDFGNRLMPAFRTP-SKIPYSDVNIGTGVAHPPRWTSDSTVAEVTSIQLEFRELSRLTG 252 (538)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHHHHGGGGCST-TSCCCSEEETTTCCEECCTTCSEEEHHHHHSSHHHHHHHHHHHC
T ss_pred hhhhhhhHHHhcCCHHHHHHHHHHHHHHHHhhcCC-CCCCcceeeecccccCCCCcCCCceeccccceeeeHHHHHHHhC
Confidence 78999999999999999999999999987555321 11111 00111 112356677788999999999
Q ss_pred CHHHHHHHhhccccccchhhhhcCCCCCCCcccCc------c-ccchH---------HHHHHHHhC--ChHHHHHHHHHH
Q 005721 127 DPKHLMLAHLFDKPCFLGLLALQADDISGFHSNTH------I-PIVIG---------SQMRYEVTG--DQLHKTISMFFM 188 (681)
Q Consensus 127 d~~yL~lA~~f~~~~~~~~l~~~~D~l~g~Hanth------i-P~~~G---------~a~~Y~~TG--d~~y~~aa~~f~ 188 (681)
|++|.+.|++..+ .++......+.|-+.+-|.+ - -+-+| ..+.|.++| |+.|++.=...+
T Consensus 253 d~~Y~~~a~r~~~--~l~~~~~~~~GL~p~~i~~~tG~~~~~~~~~lGa~~DS~YEYLlK~~il~g~~d~~y~~my~~a~ 330 (538)
T 1x9d_A 253 DKKFQEAVEKVTQ--HIHGLSGKKDGLVPMFINTHSGLFTHLGVFTLGARADSYYEYLLKQWIQGGKQETQLLEDYVEAI 330 (538)
T ss_dssp CTHHHHHHHHHHH--HHHTCSCCBTTBCCSEEETTTCCEESTTEECSSTTTHHHHHHHHHHHHHTTSCCHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHH--HHHhcccCCCCCcceEEeCCCCCccCCcceeecCCccHHHHHHHHHHHHcCCchHHHHHHHHHHH
Confidence 9999999987532 11111000011111111110 0 11122 466688898 788888777777
Q ss_pred HHhhccceeeecCCCCCCCCCCCcccccCC-CCCcccchhhHHHHHHHHHHhcccCCchhHHHHHHH
Q 005721 189 DIVNSSHTYATGGTSVGEFWSDPKRLASNL-DSNTEESCTTYNMLKVSRHLFRWTKEIAYADYYERS 254 (681)
Q Consensus 189 d~v~~~h~y~tGG~s~~E~f~~p~~l~~~l-~~~~~EtCas~nmlkl~~~Lf~~tgd~~YaD~~Era 254 (681)
+.|.+ |++-.... .+-.|..... .+.+ +....=+|=.-+|+-|...++. ..+|++..++.
T Consensus 331 ~~i~~-~L~~~~~~-~~~~~v~~~~-~g~~~~~~~hL~cF~gG~~aLgg~~~~---~~~~l~~a~~L 391 (538)
T 1x9d_A 331 EGVRT-HLLRHSEP-SKLTFVGELA-HGRFSAKMDHLVCFLPGTLALGVYHGL---PASHMELAQEL 391 (538)
T ss_dssp HHHHH-HTEEECTT-TCCEEECEEE-TTEEECEEEGGGGHHHHHHHHHHHTTC---CHHHHHHHHHH
T ss_pred HHHHH-HhccCCCC-CCceEEEecc-CCccCcccchHhhhhhhHHHhcCcccC---cHHHHHHHHHH
Confidence 77764 44322100 0000100000 0111 2345668999999999887754 34566665543
No 31
>2ri9_A Mannosyl-oligosaccharide alpha-1,2-mannosidase; alternative conformations, modulation of activity, glycoprot glycosidase, hydrolase; HET: NAG NDG MAN MMA; 1.95A {Penicillium citrinum} SCOP: a.102.2.1 PDB: 2ri8_A* 1kkt_A* 1kre_A* 1krf_A*
Probab=94.72 E-value=0.3 Score=54.20 Aligned_cols=187 Identities=11% Similarity=0.017 Sum_probs=103.6
Q ss_pred HHHHHHHHHHHc-CC-----------HHHHHHHHHHHHHHHHHhhhhhhccccc-------cccc---cccccccchHHH
Q 005721 60 ILAGLLDQYTYA-DN-----------AEALRMTTWMVEYFYNRVQNVIKKYSIE-------RHWQ---TLNEEAGGMNDV 117 (681)
Q Consensus 60 I~aGLld~y~~t-G~-----------~~aL~va~~~ad~~~~~~~~~~~~~~~~-------~~~~---~l~~E~GGmne~ 117 (681)
++-|||.+|.++ |+ +..|+.|+.+||.+..-|... .+.+.. ..+. ..--|.|.+..-
T Consensus 92 ~LGGLLSAy~Ls~g~~~~~~~~~~~~~~lL~kA~dLadrLlpAF~Tp-tgiP~~~vnl~~~~~~~~~~~~~Ae~gsl~LE 170 (475)
T 2ri9_A 92 YLAGMLSGYDLLQGPAKNLVDNQDLIDGLLDQSRNLADVLKFAFDTP-SGVPYNNINITSHGNDGATTNGLAVTGTLVLE 170 (475)
T ss_dssp HHHHHHHHHHHHHTTTTTSCCCHHHHHHHHHHHHHHHHHHGGGGCSS-SSCCCSEECTTTCCBCCCSEEEHHHHHSCHHH
T ss_pred hHhHHhHHHHhccCccccccccccchHHHHHHHHHHHHHHHHhhcCC-CCCCCceeecccCCCcCCCccchhccccceee
Confidence 789999999999 77 689999999999887544321 111110 1111 112356677778
Q ss_pred HHHHHHhcCCHHHHHHHhhccccccchhhh----hcCCCCCCCcccCcc------ccchH---------HHHHHHHhCCh
Q 005721 118 LYKLFCITQDPKHLMLAHLFDKPCFLGLLA----LQADDISGFHSNTHI------PIVIG---------SQMRYEVTGDQ 178 (681)
Q Consensus 118 L~~LY~~TGd~~yL~lA~~f~~~~~~~~l~----~~~D~l~g~Hanthi------P~~~G---------~a~~Y~~TGd~ 178 (681)
+..|-++|||++|.+.|++..+. ++... ...+.|-+.+-|.+- -.-+| ..+.|.++|+.
T Consensus 171 F~~LS~lTGd~~Y~~~a~~~~~~--l~~~~~~~~~~~~GL~p~~i~~~tg~~~~~~~~~Ga~~DS~YEYLlK~~il~g~~ 248 (475)
T 2ri9_A 171 WTRLSDLTGDEEYAKLSQKAESY--LLKPQPSSSEPFPGLVGSSININDGQFADSRVSWNGGDDSFYEYLIKMYVYDPKR 248 (475)
T ss_dssp HHHHHHHHSCTHHHHHHHHHHHH--HHSCSSGGGCSBTTBCCSEEETTTCCBCCCCBCSSTTTHHHHHHHHHHHHHCTTT
T ss_pred HHHHHHHhCCHHHHHHHHHHHHH--HHhhccccccCCCCCcceEEeCCCCcccCCceeecCCcchHHHHHHHHHHHcCCc
Confidence 89999999999999999885321 11000 001111111111110 01122 46678899875
Q ss_pred --HHHHHHHHHHHHhhccceeeecCCCCCCCCCCCccccc-C-CCCCcccchhhHHHHHHHHHHhcccCCchhHHHHHHH
Q 005721 179 --LHKTISMFFMDIVNSSHTYATGGTSVGEFWSDPKRLAS-N-LDSNTEESCTTYNMLKVSRHLFRWTKEIAYADYYERS 254 (681)
Q Consensus 179 --~y~~aa~~f~d~v~~~h~y~tGG~s~~E~f~~p~~l~~-~-l~~~~~EtCas~nmlkl~~~Lf~~tgd~~YaD~~Era 254 (681)
.|++.=...++.|.+ |+.-.-....+=.|... ..+ . .+....=+|=.-+|+-|.-.++. ..+|++..++.
T Consensus 249 ~~~~~~m~~~a~~~i~~-~l~~~~~~~~~~~~v~~--~~~~~~~~~~~hL~cF~~G~~aLgg~~~~---~~~~~~~a~~l 322 (475)
T 2ri9_A 249 FETYKDRWVLAAESTIK-HLKSHPKSRPDLTFLSS--YSNRNYDLSSQHLTCFDGGSFLLGGTVLD---RQDFIDFGLEL 322 (475)
T ss_dssp THHHHHHHHHHHHHHHH-HTEECCSSCTTCCEECE--EETTEEECEEETGGGGHHHHHHHHHHHHT---CHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHH-HhccCCCCCCCceEEEe--ccCCccccccchHHHhHHHHHHhcccccc---cHHHHHHHHHH
Confidence 677766666666653 33321100000001000 000 0 12344568999999999987764 45677766654
Q ss_pred H
Q 005721 255 L 255 (681)
Q Consensus 255 l 255 (681)
.
T Consensus 323 ~ 323 (475)
T 2ri9_A 323 V 323 (475)
T ss_dssp H
T ss_pred H
Confidence 3
No 32
>3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A*
Probab=94.72 E-value=0.11 Score=56.68 Aligned_cols=121 Identities=15% Similarity=0.090 Sum_probs=79.1
Q ss_pred cccCCchHHHHHHHHHHHHHHHhhhhCCCceeeccCCchhhhhhccCCCcccccchH-HHHHHHHHHHHHcCCHHHHHHH
Q 005721 2 WASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAPYYTIH-KILAGLLDQYTYADNAEALRMT 80 (681)
Q Consensus 2 ya~t~D~~L~~k~~~~V~~l~~~Q~~~~dGYl~~~~~~~~~~~~~~~~~W~pyy~~H-kI~aGLld~y~~tG~~~aL~va 80 (681)
|..++|+++++.+...++.+.+.|. ++|.+ |...-+ ..+.-.-||.+= -|...++.++..+++++.++.+
T Consensus 244 ~~~~~~~~~~~~i~~~l~~l~~~~~--~~g~w---p~~~~~----~~~~~~~wChG~~Gi~~~l~~~~~~~~~~~~~~~a 314 (411)
T 3e6u_A 244 SLQVSQGKLHSLVKPSVDYVCQLKF--PSGNY---PPCIGD----NRDLLVHWCHGAPGVIYMLIQAYKVFREEKYLCDA 314 (411)
T ss_dssp GGCCCHHHHHHTHHHHHHHHHHTCC--TTSCC---CSBTTC----CCCCCCSSSSSHHHHHHHHHHHHHHHCCHHHHHHH
T ss_pred HhhcChHHHHHHHHHHHHHHHHhhc--cCCCC---CCCCCc----ccCccccccCCcHHHHHHHHHHHHHcCCHHHHHHH
Confidence 5678999999999999999999988 66643 321110 111111122211 1455567888999999999999
Q ss_pred HHHHHHHHHHhhhhhhccccccccccccccccchHHHHHHHHHhcCCHHHHHHHhhccc
Q 005721 81 TWMVEYFYNRVQNVIKKYSIERHWQTLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDK 139 (681)
Q Consensus 81 ~~~ad~~~~~~~~~~~~~~~~~~~~~l~~E~GGmne~L~~LY~~TGd~~yL~lA~~f~~ 139 (681)
.+.++.+.++ . ...... ..-|+- .|.-+.|.++|+.|||++|++.|..|-+
T Consensus 315 ~~~~~~~~~~--g----~~~~~~-~lChG~-aG~~~~ll~~~~~t~~~~~~~~A~~~~~ 365 (411)
T 3e6u_A 315 YQCADVIWQY--G----LLKKGY-GLCHGS-AGNAYAFLTLYNLTQDMKYLYRACKFAE 365 (411)
T ss_dssp HHHHHHHHHH--C----SBTTCS-CSTTSH-HHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_pred HHHHHHHHhc--C----ccCCCC-ceecCh-HHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 9888766542 1 000011 011111 1567899999999999999999988754
No 33
>1nxc_A Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; glycosidase, structural genomics, PSI, protein initiative; HET: NAG BMA MAN; 1.51A {Mus musculus} SCOP: a.102.2.1
Probab=94.55 E-value=0.042 Score=61.04 Aligned_cols=194 Identities=18% Similarity=0.150 Sum_probs=107.6
Q ss_pred ccCCchHHHHHHHHHHHHHHHhhhhCCCceeeccCCchhhhhhc----cCCCcccccchHHHHHHHHHHHHHcC--CHHH
Q 005721 3 ASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEA----LIPVWAPYYTIHKILAGLLDQYTYAD--NAEA 76 (681)
Q Consensus 3 a~t~D~~L~~k~~~~V~~l~~~Q~~~~dGYl~~~~~~~~~~~~~----~~~~W~pyy~~HkI~aGLld~y~~tG--~~~a 76 (681)
..|||+.+.++++++.+.|.+.|. .+|-++.+-...-..|.. +...=-.|| .-|+-+|.++| +++.
T Consensus 187 ~lTGd~~Y~~~a~~~~~~l~~~~~--~~GL~p~~i~~~tg~~~~~~~~~Ga~~DS~Y------EYLlK~~il~g~~d~~~ 258 (478)
T 1nxc_A 187 HLSGDPVFAEKVMKIRTVLNKLDK--PEGLYPNYLNPSSGQWGQHHVSVGGLGDSFY------EYLLKAWLMSDKTDLEA 258 (478)
T ss_dssp HHHCCTHHHHHHHHHHHHHHHSCC--GGGCCCSEECTTTCCBCSCEECSSTTTHHHH------HHHHHHHHHTTTCCHHH
T ss_pred HHHCChHHHHHHHHHHHHHHhcCC--CCCccccccCCCCCCccCceeeecCCCchHH------HHHHHHHHHcCCchHHH
Confidence 358999999999999999988877 667555432110001110 000001244 55778899988 5677
Q ss_pred HHHHHHHHHHHHHHhhhhhh-cc------ccc--ccc-ccccccccchHHHHHHHHHhcCCHHHHHHHhhcccccc----
Q 005721 77 LRMTTWMVEYFYNRVQNVIK-KY------SIE--RHW-QTLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDKPCF---- 142 (681)
Q Consensus 77 L~va~~~ad~~~~~~~~~~~-~~------~~~--~~~-~~l~~E~GGmne~L~~LY~~TGd~~yL~lA~~f~~~~~---- 142 (681)
+++-....+-+.+.+....+ ++ ... .++ .-|.|-.|||----.++......++|+++|+.+.+.|+
T Consensus 259 ~~m~~~a~~~i~~~l~~~~~~~~~~v~~~~~~~~~~~~~hL~cF~gG~~aLg~~~~~~~~~~~~l~~a~~l~~tC~~~y~ 338 (478)
T 1nxc_A 259 KKMYFDAVQAIETHLIRKSSGGLTYIAEWKGGLLEHKMGHLTCFAGGMFALGADGAPEARAQHYLELGAEIARTCHESYN 338 (478)
T ss_dssp HHHHHHHHHHHHHHTEEECTTSCEEECEEETTEEECEEETGGGGHHHHHHHTSTTSCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcccCCCCcEEEEeccCCcccccccchhhhhHHHHHhccccccccchHHHHHHHHHHHHHHHHHHH
Confidence 88877777777665421000 00 000 111 12456667762111122222234789999987654332
Q ss_pred -----chhhhhcCCCC---CCCc-ccCcc---c-cchHHHHHHHHhCChHHHHHHHHHHHHhhccceeeecCCCCC
Q 005721 143 -----LGLLALQADDI---SGFH-SNTHI---P-IVIGSQMRYEVTGDQLHKTISMFFMDIVNSSHTYATGGTSVG 205 (681)
Q Consensus 143 -----~~~l~~~~D~l---~g~H-anthi---P-~~~G~a~~Y~~TGd~~y~~aa~~f~d~v~~~h~y~tGG~s~~ 205 (681)
+.|+...-+.- .... ...|- | .++..-.+|++|||+.|++.+...++.+.+ |.-+-+|.++-
T Consensus 339 ~~~tgl~PE~~~~~~~~~~~~~~~~~~~y~LRPE~iES~fylyR~TgD~~yre~gw~~f~ai~k-~~r~~~G~a~i 413 (478)
T 1nxc_A 339 RTYVKLGPEAFRFDGGVEAIATRQNEKYYILRPEVIETYMYMWRLTHDPKYRTWAWEAVEALES-HCRVNGGYSGL 413 (478)
T ss_dssp TSSSSSCCSEEESSTTCSSBCCSGGGCCBCSCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH-HTEETTEECCB
T ss_pred hcccCCCCeEEEeccCcccccccccccccCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH-Hhhcccccccc
Confidence 11221100000 0000 01111 2 357788889999999999999999999874 66666666653
No 34
>1x9d_A Endoplasmic reticulum mannosyl-oligosaccharide 1, 2-alpha-mannosidase; substrate analogue, glycosyl hydrolase; HET: SMD; 1.41A {Homo sapiens} SCOP: a.102.2.1 PDB: 1fo3_A* 1fo2_A* 1fmi_A
Probab=94.03 E-value=0.14 Score=57.57 Aligned_cols=192 Identities=17% Similarity=0.131 Sum_probs=105.8
Q ss_pred cCCchHHHHHHHHHHHHHHHhh-hhCCCceeeccCCchhhhhhc-----cCCCcccccchHHHHHHHHHHHHHcC--CHH
Q 005721 4 STHNESLKEKMSAVVSALSACQ-KEIGSGYLSAFPTEQFDRLEA-----LIPVWAPYYTIHKILAGLLDQYTYAD--NAE 75 (681)
Q Consensus 4 ~t~D~~L~~k~~~~V~~l~~~Q-~~~~dGYl~~~~~~~~~~~~~-----~~~~W~pyy~~HkI~aGLld~y~~tG--~~~ 75 (681)
.|||+.+.++++++.+.|.+.| . .+|=++.+-...-..|.. +...=-.|| .-|+-+|.++| +++
T Consensus 250 LTGd~~Y~~~a~r~~~~l~~~~~~--~~GL~p~~i~~~tG~~~~~~~~~lGa~~DS~Y------EYLlK~~il~g~~d~~ 321 (538)
T 1x9d_A 250 LTGDKKFQEAVEKVTQHIHGLSGK--KDGLVPMFINTHSGLFTHLGVFTLGARADSYY------EYLLKQWIQGGKQETQ 321 (538)
T ss_dssp HHCCTHHHHHHHHHHHHHHTCSCC--BTTBCCSEEETTTCCEESTTEECSSTTTHHHH------HHHHHHHHHTTSCCHH
T ss_pred HhCCcHHHHHHHHHHHHHHhcccC--CCCCcceEEeCCCCCccCCcceeecCCccHHH------HHHHHHHHHcCCchHH
Confidence 5899999999999999999888 4 566544431100000100 000001244 56788999998 677
Q ss_pred HHHHHHHHHHHHHHHhhhhh--hcc------ccc--ccc-ccccccccchHHHHHHHHHhcCCHHHHHHHhhcccccc--
Q 005721 76 ALRMTTWMVEYFYNRVQNVI--KKY------SIE--RHW-QTLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDKPCF-- 142 (681)
Q Consensus 76 aL~va~~~ad~~~~~~~~~~--~~~------~~~--~~~-~~l~~E~GGmne~L~~LY~~TGd~~yL~lA~~f~~~~~-- 142 (681)
.+++-....+=+.+.+.... ..+ ... .++ .-|.|-.|||- +|- -.+-.+++|+++|+.+.+.|+
T Consensus 322 y~~my~~a~~~i~~~L~~~~~~~~~~~v~~~~~g~~~~~~~hL~cF~gG~~-aLg--g~~~~~~~~l~~a~~L~~tC~~~ 398 (538)
T 1x9d_A 322 LLEDYVEAIEGVRTHLLRHSEPSKLTFVGELAHGRFSAKMDHLVCFLPGTL-ALG--VYHGLPASHMELAQELMETCYQM 398 (538)
T ss_dssp HHHHHHHHHHHHHHHTEEECTTTCCEEECEEETTEEECEEEGGGGHHHHHH-HHH--HHTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCCCCCceEEEeccCCccCcccchHhhhhhhHH-Hhc--CcccCcHHHHHHHHHHHHHHHHH
Confidence 77777777666665542100 000 000 011 12556667762 221 123456889999987644322
Q ss_pred -------chhhhhcCCC-----CCC---CcccCccc----cchHHHHHHHHhCChHHHHHHHHHHHHhhccceeeecCCC
Q 005721 143 -------LGLLALQADD-----ISG---FHSNTHIP----IVIGSQMRYEVTGDQLHKTISMFFMDIVNSSHTYATGGTS 203 (681)
Q Consensus 143 -------~~~l~~~~D~-----l~g---~HanthiP----~~~G~a~~Y~~TGd~~y~~aa~~f~d~v~~~h~y~tGG~s 203 (681)
+.|+...-+. ... .....|-+ .++..-.+|++|||+.|++.+-..++.+.++=-...||.+
T Consensus 399 Y~~~~tGl~PE~~~~~~~~~~~~~~~~~~~~d~~y~LRPE~IES~fylyR~TgD~~yre~gw~~f~ai~k~~rt~~Ggya 478 (538)
T 1x9d_A 399 NRQMETGLSPEIVHFNLYPQPGRRDVEVKPADRHNLLRPETVESLFYLYRVTGDRKYQDWGWEILQSFSRFTRVPSGGYS 478 (538)
T ss_dssp HHTSTTSCCCSEEECCSSCCTTCCSCBCCGGGCCBCCCCHHHHHHHHHHHHHCCTHHHHHHHHHHHHHHHHTBCTTSCBC
T ss_pred HHhcccCCCceEEEeccCCCccccceeeeccCcccCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcccccCCcc
Confidence 1122110000 000 00111222 3577888999999999999999999998754333444466
Q ss_pred CCC
Q 005721 204 VGE 206 (681)
Q Consensus 204 ~~E 206 (681)
+-.
T Consensus 479 ~i~ 481 (538)
T 1x9d_A 479 SIN 481 (538)
T ss_dssp CBS
T ss_pred ccc
Confidence 543
No 35
>1hcu_A Alpha-1,2-mannosidase; glycosylation, glycosyl hydrolase; HET: NAG; 2.37A {Trichoderma reesei} SCOP: a.102.2.1
Probab=93.75 E-value=0.4 Score=53.55 Aligned_cols=187 Identities=14% Similarity=-0.002 Sum_probs=104.0
Q ss_pred HHHHHHHHHHHcCC------------HHHHHHHHHHHHHHHHHhhhhhhcccc--------ccccc---cccccccchHH
Q 005721 60 ILAGLLDQYTYADN------------AEALRMTTWMVEYFYNRVQNVIKKYSI--------ERHWQ---TLNEEAGGMND 116 (681)
Q Consensus 60 I~aGLld~y~~tG~------------~~aL~va~~~ad~~~~~~~~~~~~~~~--------~~~~~---~l~~E~GGmne 116 (681)
++-|||.+|.++|+ +..|+.|+.+||.+..-|... .+.+. ...+. ..--|.|.+..
T Consensus 105 ~LGGLLSAy~Ls~~~~~~~~~~~~~~~~lL~kA~dLadrLlpAFdTp-tgiP~~~vnl~~~~~~~~~~~~~~Ae~gsl~L 183 (503)
T 1hcu_A 105 YLGGLLSAYDLLRGPFSSLATNQTLVNSLLRQAQTLANGLKVAFTTP-SGVPDPTVFFNPTVRRSGASSNNVAEIGSLVL 183 (503)
T ss_dssp HHHHHHHHHHHHHTTTGGGCCCHHHHHHHHHHHHHHHHHHGGGGCSS-SSCCCSEEECSSSCEECCCSEEEHHHHTTSHH
T ss_pred hHhHHHHHHHHccCccccccccccchHHHHHHHHHHHHHHHHhhcCC-CCCCcceeecccCCCCCCCCccccccccceee
Confidence 68999999999998 489999999999887544321 11111 01111 11236677778
Q ss_pred HHHHHHHhcCCHHHHHHHhhccccccchhhhh---cCCCCCCCcccCcc------ccchH---------HHHHHHHhCCh
Q 005721 117 VLYKLFCITQDPKHLMLAHLFDKPCFLGLLAL---QADDISGFHSNTHI------PIVIG---------SQMRYEVTGDQ 178 (681)
Q Consensus 117 ~L~~LY~~TGd~~yL~lA~~f~~~~~~~~l~~---~~D~l~g~Hanthi------P~~~G---------~a~~Y~~TGd~ 178 (681)
-+..|-++|||++|.+.|++..+. ++.... ..+-|-+.+-|.+- -.-+| ..+.|.++|+.
T Consensus 184 EF~~LS~lTGd~~Y~~~a~~~~~~--l~~~~~~~~~~~GL~p~~i~~~tg~~~~~~~~~Ga~~DS~YEYLlK~~il~g~~ 261 (503)
T 1hcu_A 184 EWTRLSDLTGNPQYAQLAQKGESY--LLNPKGSPEAWPGLIGTFVSTSNGTFQDSSGSWSGLMDSFYEYLIKMYLYDPVA 261 (503)
T ss_dssp HHHHHHHHHSCTHHHHHHHHHHHH--HHSCCBSCCSBTTBCCSEEETTTCCBCCCEECSSTTTHHHHHHHHHHHHHCTTT
T ss_pred ehHHHHHHhCChHHHHHHHHHHHH--HHhhhcccCCCCCceeeEEeCCCCcccCCeeeecCCCccHHHHHHHHHHHcCCc
Confidence 899999999999999999886321 110000 01111111111110 01123 46668899875
Q ss_pred --HHHHHHHHHHHHhhccceeeecCCCCCCCCCCCccccc-C-CCCCcccchhhHHHHHHHHHHhcccCCchhHHHHHHH
Q 005721 179 --LHKTISMFFMDIVNSSHTYATGGTSVGEFWSDPKRLAS-N-LDSNTEESCTTYNMLKVSRHLFRWTKEIAYADYYERS 254 (681)
Q Consensus 179 --~y~~aa~~f~d~v~~~h~y~tGG~s~~E~f~~p~~l~~-~-l~~~~~EtCas~nmlkl~~~Lf~~tgd~~YaD~~Era 254 (681)
.|++.=...++.|.+ |+.-.-....+=.|... +.+ . .+....=+|=.-+|+-|.-.++. ..+|++..++.
T Consensus 262 ~~~y~~m~~~a~~~i~~-~l~~~~~~~~~~~~v~~--~~~~~~~~~~~hL~cF~~G~~aLgg~~~~---~~~~~~~a~~L 335 (503)
T 1hcu_A 262 FAHYKDRWVLGADSTIG-HLGSHPSTRKDLTFLSS--YNGQSTSPNSGHLASFGGGNFILGGILLN---EQKYIDFGIKL 335 (503)
T ss_dssp THHHHHHHHHHHHHHHH-HTEECBTTCTTCCEECE--EETTEEESEEEGGGGGHHHHHHHHHHHHT---CHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHH-HhccCCCCCCCceEEEe--ccCCccccccchhhhhhhHHHHhcCcccc---cHHHHHHHHHH
Confidence 677766666666653 33321100000001000 001 0 12345568999999999987764 45677666654
Q ss_pred H
Q 005721 255 L 255 (681)
Q Consensus 255 l 255 (681)
.
T Consensus 336 ~ 336 (503)
T 1hcu_A 336 A 336 (503)
T ss_dssp H
T ss_pred H
Confidence 3
No 36
>2ri9_A Mannosyl-oligosaccharide alpha-1,2-mannosidase; alternative conformations, modulation of activity, glycoprot glycosidase, hydrolase; HET: NAG NDG MAN MMA; 1.95A {Penicillium citrinum} SCOP: a.102.2.1 PDB: 2ri8_A* 1kkt_A* 1kre_A* 1krf_A*
Probab=93.43 E-value=0.26 Score=54.65 Aligned_cols=192 Identities=15% Similarity=0.099 Sum_probs=105.0
Q ss_pred cCCchHHHHHHHHHHHHHHHhhhh---CCCceeeccCCchhhhhhccCCCc----ccccchHHHHHHHHHHHHHcCCH--
Q 005721 4 STHNESLKEKMSAVVSALSACQKE---IGSGYLSAFPTEQFDRLEALIPVW----APYYTIHKILAGLLDQYTYADNA-- 74 (681)
Q Consensus 4 ~t~D~~L~~k~~~~V~~l~~~Q~~---~~dGYl~~~~~~~~~~~~~~~~~W----~pyy~~HkI~aGLld~y~~tG~~-- 74 (681)
.|||+.+.++++++.+.|.+.|.+ ..+|=++.+-...-..|....-.| -.|| .-|+-+|.++|+.
T Consensus 177 lTGd~~Y~~~a~~~~~~l~~~~~~~~~~~~GL~p~~i~~~tg~~~~~~~~~Ga~~DS~Y------EYLlK~~il~g~~~~ 250 (475)
T 2ri9_A 177 LTGDEEYAKLSQKAESYLLKPQPSSSEPFPGLVGSSININDGQFADSRVSWNGGDDSFY------EYLIKMYVYDPKRFE 250 (475)
T ss_dssp HHSCTHHHHHHHHHHHHHHSCSSGGGCSBTTBCCSEEETTTCCBCCCCBCSSTTTHHHH------HHHHHHHHHCTTTTH
T ss_pred HhCCHHHHHHHHHHHHHHHhhccccccCCCCCcceEEeCCCCcccCCceeecCCcchHH------HHHHHHHHHcCCchH
Confidence 589999999999999999987710 134544332110000111100011 1344 5678899999876
Q ss_pred HHHHHHHHHHHHHHHHhhhhh---hccc------cc--ccc-ccccccccchHHHHHHHHHhcCCHHHHHHHhhcccccc
Q 005721 75 EALRMTTWMVEYFYNRVQNVI---KKYS------IE--RHW-QTLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDKPCF 142 (681)
Q Consensus 75 ~aL~va~~~ad~~~~~~~~~~---~~~~------~~--~~~-~~l~~E~GGmne~L~~LY~~TGd~~yL~lA~~f~~~~~ 142 (681)
+.+++-....+=+.+.+.... +.+. .. .++ .-|.|-.|||- +|- -.+-++++|+++|+.+.+.|+
T Consensus 251 ~~~~m~~~a~~~i~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~hL~cF~~G~~-aLg--g~~~~~~~~~~~a~~l~~tC~ 327 (475)
T 2ri9_A 251 TYKDRWVLAAESTIKHLKSHPKSRPDLTFLSSYSNRNYDLSSQHLTCFDGGSF-LLG--GTVLDRQDFIDFGLELVDGCE 327 (475)
T ss_dssp HHHHHHHHHHHHHHHHTEECCSSCTTCCEECEEETTEEECEEETGGGGHHHHH-HHH--HHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccCCCCCCCceEEEeccCCccccccchHHHhHHHHH-Hhc--ccccccHHHHHHHHHHHHHHH
Confidence 666666666665555432110 0000 00 011 12556677763 222 123357899999987754432
Q ss_pred ---------chhhhhcCCC---C---------CCCcc-cCcc---c-cchHHHHHHHHhCChHHHHHHHHHHHHhhccce
Q 005721 143 ---------LGLLALQADD---I---------SGFHS-NTHI---P-IVIGSQMRYEVTGDQLHKTISMFFMDIVNSSHT 196 (681)
Q Consensus 143 ---------~~~l~~~~D~---l---------~g~Ha-nthi---P-~~~G~a~~Y~~TGd~~y~~aa~~f~d~v~~~h~ 196 (681)
+.|+...-+. . .++.. ..|- | .++..-.+|++|||+.|++.+...++.+.+ |.
T Consensus 328 ~~y~~~~tGl~PE~~~~~~~~~~~~~~~~~~~~g~~~~~~~y~LRPE~iES~fylyR~TgD~~yr~~gw~~f~ai~k-~~ 406 (475)
T 2ri9_A 328 ATYNSTLTKIGPDSWGWDPKKVPSDQKEFYEKAGFYISSGSYVLRPEVIESFYYAHRVTGKEIYRDWVWNAFVAINS-TC 406 (475)
T ss_dssp HHHHTSSSSCCCSEEECCTTCCCGGGHHHHHHHSCEEEECCBCSCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH-HT
T ss_pred HHHHhcccCCCCcEEEeecCcccccccccccCCCceecccccCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH-HH
Confidence 1122111000 0 01110 1122 2 357788889999999999999999999874 55
Q ss_pred eeecCCCCC
Q 005721 197 YATGGTSVG 205 (681)
Q Consensus 197 y~tGG~s~~ 205 (681)
-+-.|.++-
T Consensus 407 rt~~G~a~i 415 (475)
T 2ri9_A 407 RTDSGFAAV 415 (475)
T ss_dssp BCSSSBCCB
T ss_pred ccccCCccc
Confidence 555666653
No 37
>3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A*
Probab=93.23 E-value=0.13 Score=56.02 Aligned_cols=128 Identities=13% Similarity=-0.013 Sum_probs=79.8
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhhhhhccccc--cccc-ccccccc--chHHHHHHHHHhcCCHHHHHHH
Q 005721 60 ILAGLLDQYTYADNAEALRMTTWMVEYFYNRVQNVIKKYSIE--RHWQ-TLNEEAG--GMNDVLYKLFCITQDPKHLMLA 134 (681)
Q Consensus 60 I~aGLld~y~~tG~~~aL~va~~~ad~~~~~~~~~~~~~~~~--~~~~-~l~~E~G--Gmne~L~~LY~~TGd~~yL~lA 134 (681)
|+..|+..+..+++++.++.+.+..+|+.+...+. ..++.. .... ..+=-+| |+..+|..+++.++|++|++.|
T Consensus 236 I~~~Ll~~~~~~~~~~~~~~i~~~l~~l~~~~~~~-g~wp~~~~~~~~~~~~wChG~~Gi~~~l~~~~~~~~~~~~~~~a 314 (411)
T 3e6u_A 236 IYYYLMQPSLQVSQGKLHSLVKPSVDYVCQLKFPS-GNYPPCIGDNRDLLVHWCHGAPGVIYMLIQAYKVFREEKYLCDA 314 (411)
T ss_dssp HHHHHTCGGGCCCHHHHHHTHHHHHHHHHHTCCTT-SCCCSBTTCCCCCCCSSSSSHHHHHHHHHHHHHHHCCHHHHHHH
T ss_pred HHHHHHHHHhhcChHHHHHHHHHHHHHHHHhhccC-CCCCCCCCcccCccccccCCcHHHHHHHHHHHHHcCCHHHHHHH
Confidence 55566666778899999999999999998643210 111100 0000 0001234 7889999999999999999999
Q ss_pred hhccccccchhhhhcCCCCCCCcccCcccc--chHHHHHHHHhCChHHHHHHHHHHHHhhcc
Q 005721 135 HLFDKPCFLGLLALQADDISGFHSNTHIPI--VIGSQMRYEVTGDQLHKTISMFFMDIVNSS 194 (681)
Q Consensus 135 ~~f~~~~~~~~l~~~~D~l~g~HanthiP~--~~G~a~~Y~~TGd~~y~~aa~~f~d~v~~~ 194 (681)
...-+.. +. .+ .+...+..-|.-. ..-..+.|+.|+|+.|++.+..+.+.+.++
T Consensus 315 ~~~~~~~--~~--~g--~~~~~~~lChG~aG~~~~ll~~~~~t~~~~~~~~A~~~~~~~~~~ 370 (411)
T 3e6u_A 315 YQCADVI--WQ--YG--LLKKGYGLCHGSAGNAYAFLTLYNLTQDMKYLYRACKFAEWCLEY 370 (411)
T ss_dssp HHHHHHH--HH--HC--SBTTCSCSTTSHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHH--Hh--cC--ccCCCCceecChHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 8653211 11 00 0011112223332 223567799999999999999999988653
No 38
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A
Probab=93.08 E-value=2.8 Score=45.79 Aligned_cols=238 Identities=13% Similarity=0.110 Sum_probs=120.8
Q ss_pred CchHHHHHHHHHHHHHHHhhhhCCCceeecc-CCc-----hhhhhhcc---CCCcc-----cccchH-HHHHHHHHHHHH
Q 005721 6 HNESLKEKMSAVVSALSACQKEIGSGYLSAF-PTE-----QFDRLEAL---IPVWA-----PYYTIH-KILAGLLDQYTY 70 (681)
Q Consensus 6 ~D~~L~~k~~~~V~~l~~~Q~~~~dGYl~~~-~~~-----~~~~~~~~---~~~W~-----pyy~~H-kI~aGLld~y~~ 70 (681)
+-+.+++.++.-.|.|++||. ++|.+-.- -.. .+.+-|.. +..+. |--+.- ..-++|-.+++.
T Consensus 88 ~~~d~ldeikwg~D~llk~~~--~~g~~y~qVgd~~~Dh~~w~~Pe~~~~~R~~y~~~~~~pgs~~a~~~AAalA~as~v 165 (433)
T 1ks8_A 88 ALDDGRKAVKWATDYFIKAHT--SQNEFYGQVGQGDADHAFWGRPEDMTMARPAYKIDTSRPGSDLAGETAAALAAASIV 165 (433)
T ss_dssp CHHHHHHHHHHHHHHHHHHCC--BTTBEEEEESCHHHHHTCCSCGGGCCSCCCEEEECSSSCCHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHhcc--CCCcEEEEeCCCCcCCcccCCHhhCCCCCceeeccCCCCccHHHHHHHHHHHHHHHh
Confidence 347889999999999999999 56543210 000 11111111 11111 111111 123333344444
Q ss_pred cC------CHHHHHHHHHHHHHHHHHhhhhhhccccc-cccc--cccccccchHHHHHHHHHhcCCHHHHHHHhhccccc
Q 005721 71 AD------NAEALRMTTWMVEYFYNRVQNVIKKYSIE-RHWQ--TLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDKPC 141 (681)
Q Consensus 71 tG------~~~aL~va~~~ad~~~~~~~~~~~~~~~~-~~~~--~l~~E~GGmne~L~~LY~~TGd~~yL~lA~~f~~~~ 141 (681)
-. .++.|+.|+++-+|..+.-+......+.. .... ....| +..+-+|||..|||++||+.|+.+...
T Consensus 166 fk~~D~~yA~~~L~~A~~~~~fa~~~~~~y~~~~~~~~~~Y~ss~~~DE---~~WAAa~Ly~aTgd~~Yl~~~~~~~~~- 241 (433)
T 1ks8_A 166 FRNVDGTYSNNLLTHARQLFDFANNYRGKYSDSITDARNFYASADYRDE---LVWAAAWLYRATNDNTYLNTAESLYDE- 241 (433)
T ss_dssp TTTTCHHHHHHHHHHHHHHHHHHHHSCCCHHHHSGGGGGTSCCCCTHHH---HHHHHHHHHHHHCCHHHHHHHHHHHHH-
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCcCCCCCCCCCcccH---HHHHHHHHHHHhCCHHHHHHHHHHHHh-
Confidence 33 24788888888888865321110000000 0000 01112 345778999999999999998765321
Q ss_pred cchhhhhcCCCCCCCcccCccccchHHH-HHHHHhCChHHHHHHHHHHHHhhccceeeecCCCCCCCCCCCcccccCCCC
Q 005721 142 FLGLLALQADDISGFHSNTHIPIVIGSQ-MRYEVTGDQLHKTISMFFMDIVNSSHTYATGGTSVGEFWSDPKRLASNLDS 220 (681)
Q Consensus 142 ~~~~l~~~~D~l~g~HanthiP~~~G~a-~~Y~~TGd~~y~~aa~~f~d~v~~~h~y~tGG~s~~E~f~~p~~l~~~l~~ 220 (681)
+ . .. +....+... .+..|.. .+.++++++.|++.++.|.+.+...-.+--|| ++- ..
T Consensus 242 ~-~---~~-~~~~~~~Wd---~~~~g~~~lla~~~~~~~~~~~~~~~~~~~~~~~~~tp~G------------l~~--~~ 299 (433)
T 1ks8_A 242 F-G---LQ-NWGGGLNWD---SKVSGVQVLLAKLTNKQAYKDTVQSYVNYLINNQQKTPKG------------LLY--ID 299 (433)
T ss_dssp T-T---GG-GSCCCCCSS---CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTSCBCTTS------------CBC--CC
T ss_pred c-C---cC-cCcCCcCcc---chhhHHHHHHhhccChHHHHHHHHHHHHHHHhcCCcCCCC------------cee--ec
Confidence 1 0 00 000011111 1223433 34578899999999999988876322111112 111 01
Q ss_pred CcccchhhHHHHHHHHHHhcc-cCCchhHHHHHHHHhhhcccccCCCCCCeEEEecCCC
Q 005721 221 NTEESCTTYNMLKVSRHLFRW-TKEIAYADYYERSLTNGVLGIQRGTEPGVMIYLLPLA 278 (681)
Q Consensus 221 ~~~EtCas~nmlkl~~~Lf~~-tgd~~YaD~~EralyN~ila~q~~~~~g~~~Y~~pl~ 278 (681)
.-...=-+.|+.+++-....+ +++.+|.+...+.+ |=|||. ++ ..|+.-.+
T Consensus 300 ~WGs~~~~~n~a~l~~~~~~~~~~~~~y~~~A~~ql-dYiLG~-n~-----~SyvvG~G 351 (433)
T 1ks8_A 300 MWGTLRHAANAAFIMLEAAELGLSASSYRQFAQTQI-DYALGD-GG-----RSFVCGFG 351 (433)
T ss_dssp STTHHHHHHHHHHHHHHHHHTTSSHHHHHHHHHHHH-HHHHTT-TS-----SCCBTTSS
T ss_pred CCchhHHHHHHHHHHHHHHhcCCCHHHHHHHHHHhH-hhccCC-CC-----cceEeccC
Confidence 111111123444444444555 78899999987765 888986 22 25665554
No 39
>1ia6_A Cellulase CEL9M; cellullase, alpha barrel, hydrolase; 1.80A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1ia7_A*
Probab=92.39 E-value=4.9 Score=44.05 Aligned_cols=238 Identities=14% Similarity=0.110 Sum_probs=118.7
Q ss_pred chHHHHHHHHHHHHHHHhhhhCCCcee-eccCCc-----hhhhhhcc---CCC-cc-----cccchH-HHHHHHHHHHHH
Q 005721 7 NESLKEKMSAVVSALSACQKEIGSGYL-SAFPTE-----QFDRLEAL---IPV-WA-----PYYTIH-KILAGLLDQYTY 70 (681)
Q Consensus 7 D~~L~~k~~~~V~~l~~~Q~~~~dGYl-~~~~~~-----~~~~~~~~---~~~-W~-----pyy~~H-kI~aGLld~y~~ 70 (681)
-+.+++.++.-.|.|++||. .+|.+ .-.... .+.+-|.. +.. |. |--..- ..-+.|-.+++.
T Consensus 91 ~~d~ldeikwg~D~llk~~~--~~~~~y~qVgd~~~Dh~~w~~Pe~~~~~R~~~y~~~~~~p~sd~a~~~AAalAaas~v 168 (441)
T 1ia6_A 91 TTKMLQQLKYFTDYFLKSHP--NSTTFYYQVGEGNADHTYWGAPEEQTGQRPSLYKADPSSPASDILSETSAALTLMYLN 168 (441)
T ss_dssp HHHHHHHHHHHHHHHHHTCC--STTCEEEEESCHHHHTTCCSCGGGCCSCCCCCEEEBTTBCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcc--CCCcEEEEeCCCCccccccCChhhCCCCCceeeEeCCCCCccHHHHHHHHHHHHHHHh
Confidence 47889999999999999975 33322 111110 11111211 121 11 111111 223333344444
Q ss_pred cCC------HHHHHHHHHHHHHHHHHhhhhhhccccccccc--cccccccchHHHHHHHHHhcCCHHHHHHHhhcccccc
Q 005721 71 ADN------AEALRMTTWMVEYFYNRVQNVIKKYSIERHWQ--TLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDKPCF 142 (681)
Q Consensus 71 tG~------~~aL~va~~~ad~~~~~~~~~~~~~~~~~~~~--~l~~E~GGmne~L~~LY~~TGd~~yL~lA~~f~~~~~ 142 (681)
-.+ ++.|+.|+++-+|..+.-. . ........ ....| +..+-+|||..|||++||+.|+.+.....
T Consensus 169 fk~~D~~yA~~~L~~A~~~~~fa~~~~g-~---~~~~~~Y~ss~~~DE---~~WAAa~Ly~aTgd~~Yl~~a~~~~~~~~ 241 (441)
T 1ia6_A 169 YKNIDSAYATKCLNAAKELYAMGKANQG-V---GNGQSFYQATSFGDD---LAWAATWLYTATNDSTYITDAEQFITLGN 241 (441)
T ss_dssp HTTTCHHHHHHHHHHHHHHHHHHHHSCS-C---CCCTTTSCCCCSHHH---HHHHHHHHHHHHCCTHHHHHHHHHTTC--
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHHcCC-C---CCCCCCCCCCCchhH---HHHHHHHHHHHhCCHHHHHHHHHHHhhhh
Confidence 332 5788888888888865311 0 00000000 01122 34677899999999999999886532210
Q ss_pred chhhhhcCC--CCCCCcccCccccchHHHH-HHHHhCChHHHHHHHHHHHHhhccceeeecCCCCCCCCCCCcccccCCC
Q 005721 143 LGLLALQAD--DISGFHSNTHIPIVIGSQM-RYEVTGDQLHKTISMFFMDIVNSSHTYATGGTSVGEFWSDPKRLASNLD 219 (681)
Q Consensus 143 ~~~l~~~~D--~l~g~HanthiP~~~G~a~-~Y~~TGd~~y~~aa~~f~d~v~~~h~y~tGG~s~~E~f~~p~~l~~~l~ 219 (681)
.. ...+ ....+... .+..|... +.++++++.|++.++.+.+.....-.+--||..-.-.|
T Consensus 242 --~~-~~~~~~~~~~~~Wd---~~~~g~~~lla~~~~~~~~~~~~~~~~~~~~~~~~~tp~Gl~~~~~W----------- 304 (441)
T 1ia6_A 242 --TM-NENKMQDKWTMCWD---DMYVPAALRLAQITGKQIYKDAIEFNFNYWKTQVTTTPGGLKWLSNW----------- 304 (441)
T ss_dssp -------CGGGCSSCSSSS---CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTSCBCTTSCBCCCST-----------
T ss_pred --hc-ccccccCCCcCCcc---chHHHHHHHHHhccCcHHHHHHHHHHHHHHHhhcccCCCCceecCCc-----------
Confidence 00 0000 00001011 12345444 46778999999988887765542111222333211111
Q ss_pred CCcccchhhHHHHHHHHHHhcccCCchhHHHHHHHHhhhcccccCCCCCCeEEEecCCC
Q 005721 220 SNTEESCTTYNMLKVSRHLFRWTKEIAYADYYERSLTNGVLGIQRGTEPGVMIYLLPLA 278 (681)
Q Consensus 220 ~~~~EtCas~nmlkl~~~Lf~~tgd~~YaD~~EralyN~ila~q~~~~~g~~~Y~~pl~ 278 (681)
...=-+.|+.+++..-..++++.+|.+...+.+ |=|||. +|. .+.|+.-.+
T Consensus 305 ---Gs~~~~~~~a~l~~~~~~~~~~~~y~~~A~~ql-dYiLG~-NP~---~~SyvvG~G 355 (441)
T 1ia6_A 305 ---GVLRYAAAESMVMLVYCKQNPDQSLLDLAKKQV-DYILGD-NPA---NMSYIIGYG 355 (441)
T ss_dssp ---THHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHH-HHHHTC-STT---CCCSBTTSS
T ss_pred ---chHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHH-HHhcCC-CCC---CceeEEecC
Confidence 111112344455554456778899999987765 888885 332 345555443
No 40
>1dl2_A Class I alpha-1,2-mannosidase; alpha-alpha helix barrel, hydrolase; HET: NAG NDG BMA MAN; 1.54A {Saccharomyces cerevisiae} SCOP: a.102.2.1 PDB: 1g6i_A*
Probab=92.31 E-value=0.24 Score=55.39 Aligned_cols=190 Identities=14% Similarity=0.076 Sum_probs=104.3
Q ss_pred cCCchHHHHHHHHHHHHHHHhhhh--CCCceeeccCCchhhhhhc----cCCCcccccchHHHHHHHHHHHHHcCCHHHH
Q 005721 4 STHNESLKEKMSAVVSALSACQKE--IGSGYLSAFPTEQFDRLEA----LIPVWAPYYTIHKILAGLLDQYTYADNAEAL 77 (681)
Q Consensus 4 ~t~D~~L~~k~~~~V~~l~~~Q~~--~~dGYl~~~~~~~~~~~~~----~~~~W~pyy~~HkI~aGLld~y~~tG~~~aL 77 (681)
.|||+.+.++++++.+.|.+.|.. ..+|=++.+-...-..|.. +...=-.|| .-|+-+|.++++++.+
T Consensus 188 LTGd~~Y~~~a~r~~~~l~~~~~~~~~~~GL~p~~i~~~tg~~~~~~~~lGa~~DS~Y------EYLlK~~il~~d~~y~ 261 (511)
T 1dl2_A 188 LTGNRTYWELVERVYEPLYKNNDLLNTYDGLVPIYTFPDTGKFGASTIRFGSRGDSFY------EYLLKQYLLTHETLYY 261 (511)
T ss_dssp HHTCHHHHHHHHTTHHHHHHHHTHHHHHTTCCBSEECTTTCCBCSCCBCSSTTTHHHH------HHHHHHHHHHCCHHHH
T ss_pred HHCChHHHHHHHHHHHHHHhcccccCCCCCCcceEEcCCCCCccCCeeeecCCCCcHH------HHHHHHHHhcCCHHHH
Confidence 489999999999999999998821 1566554432110001110 000001244 5577888888999888
Q ss_pred HHHHHHHHHHHHHhhhhh--------hccc---cc--ccc-ccccccccchHHHHHHHHHh---------cCCHHHHHHH
Q 005721 78 RMTTWMVEYFYNRVQNVI--------KKYS---IE--RHW-QTLNEEAGGMNDVLYKLFCI---------TQDPKHLMLA 134 (681)
Q Consensus 78 ~va~~~ad~~~~~~~~~~--------~~~~---~~--~~~-~~l~~E~GGmne~L~~LY~~---------TGd~~yL~lA 134 (681)
++-....+=+.+.+.... .... .. .++ .-|.|-.|||- +|--...+ ..+++|+++|
T Consensus 262 ~m~~~a~~~i~~~L~~~~~~~~~~~~~~~~~~~~g~~~~~~~hL~cF~gG~~-aLg~~~~~~~~~a~~~~~~~~~~~~~a 340 (511)
T 1dl2_A 262 DLYRKSMEGMKKHLLAQSKPSSLWYIGEREQGLHGQLSPKMDHLVCFMGGLL-ASGSTEGLSIHEARRRPFFSKSDWDLA 340 (511)
T ss_dssp HHHHHHHHHHHHHTEEECTTTCCEEECBBTTCTTSCCBCEEEGGGGGHHHHH-HHHHHTTCCHHHHTTSTTCCHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCCCCCCcEEEEEeecCCCCccccccchhhhchhHHH-HhccccCCChhhhhhcccccHHHHHHH
Confidence 888777777766543210 0000 00 011 12456667762 22211111 1345899999
Q ss_pred hhcccccc---------chhhhhcCCCC------------CC--Cc-ccCcc---c-cchHHHHHHHHhCChHHHHHHHH
Q 005721 135 HLFDKPCF---------LGLLALQADDI------------SG--FH-SNTHI---P-IVIGSQMRYEVTGDQLHKTISMF 186 (681)
Q Consensus 135 ~~f~~~~~---------~~~l~~~~D~l------------~g--~H-anthi---P-~~~G~a~~Y~~TGd~~y~~aa~~ 186 (681)
+.+.+.|+ +.|+...-+.- .. .+ ...|- | .++..-.+|++|||+.|++.+..
T Consensus 341 ~~l~~tC~~~y~~~~tGl~PE~~~~~~~~~~~~~~~~~~~~d~~~~~~d~~y~LRPE~iES~fylyR~TgD~~yre~gw~ 420 (511)
T 1dl2_A 341 KGITDTCYQMYKQSSSGLAPEIVVFNDGNIKQDGWWRSSVGDFFVKPLDRHNLQRPETVESIMFMYHLSHDHKYREWGAE 420 (511)
T ss_dssp HHHHHHHHHHHHTSTTSCCCSEEEECCSCCC-CCCEECSSSSEEECGGGCCBCCCCHHHHHHHHHHHHHCCTHHHHHHHH
T ss_pred HHHHHHHHHHHhcCccCCCceEEEeecCCccccccccccccceeeccCCcccCcCHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 88754332 11211100000 00 00 01112 2 35778888999999999999999
Q ss_pred HHHHhhccceeeecC
Q 005721 187 FMDIVNSSHTYATGG 201 (681)
Q Consensus 187 f~d~v~~~h~y~tGG 201 (681)
.++.+.+ |.-+-.|
T Consensus 421 ~f~ai~k-~~rt~~G 434 (511)
T 1dl2_A 421 IATSFFE-NTCVDCN 434 (511)
T ss_dssp HHHHHHH-HHEESTT
T ss_pred HHHHHHH-HhccccC
Confidence 9999875 5554444
No 41
>1hcu_A Alpha-1,2-mannosidase; glycosylation, glycosyl hydrolase; HET: NAG; 2.37A {Trichoderma reesei} SCOP: a.102.2.1
Probab=91.53 E-value=0.51 Score=52.72 Aligned_cols=192 Identities=16% Similarity=0.104 Sum_probs=104.9
Q ss_pred cCCchHHHHHHHHHHHHHHHhhh--hCCCceeeccCCchhhhhhc----cCCCcccccchHHHHHHHHHHHHHcCCH--H
Q 005721 4 STHNESLKEKMSAVVSALSACQK--EIGSGYLSAFPTEQFDRLEA----LIPVWAPYYTIHKILAGLLDQYTYADNA--E 75 (681)
Q Consensus 4 ~t~D~~L~~k~~~~V~~l~~~Q~--~~~dGYl~~~~~~~~~~~~~----~~~~W~pyy~~HkI~aGLld~y~~tG~~--~ 75 (681)
.|||+.+.++++++.+.|.+.|. ...+|=++.+-...-..|.. +...=-.|| .-|+-+|.++|+. +
T Consensus 191 lTGd~~Y~~~a~~~~~~l~~~~~~~~~~~GL~p~~i~~~tg~~~~~~~~~Ga~~DS~Y------EYLlK~~il~g~~~~~ 264 (503)
T 1hcu_A 191 LTGNPQYAQLAQKGESYLLNPKGSPEAWPGLIGTFVSTSNGTFQDSSGSWSGLMDSFY------EYLIKMYLYDPVAFAH 264 (503)
T ss_dssp HHSCTHHHHHHHHHHHHHHSCCBSCCSBTTBCCSEEETTTCCBCCCEECSSTTTHHHH------HHHHHHHHHCTTTTHH
T ss_pred HhCChHHHHHHHHHHHHHHhhhcccCCCCCceeeEEeCCCCcccCCeeeecCCCccHH------HHHHHHHHHcCCchHH
Confidence 48999999999999999998773 11345443321100001110 000001244 5678899999876 6
Q ss_pred HHHHHHHHHHHHHHHhhhhh---hcc------cc--cccc-ccccccccchHHHHHHHHHhcCCHHHHHHHhhcccccc-
Q 005721 76 ALRMTTWMVEYFYNRVQNVI---KKY------SI--ERHW-QTLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDKPCF- 142 (681)
Q Consensus 76 aL~va~~~ad~~~~~~~~~~---~~~------~~--~~~~-~~l~~E~GGmne~L~~LY~~TGd~~yL~lA~~f~~~~~- 142 (681)
.+++-....+=+.+.+.... +.+ .. -.++ .-|.|-.|||- +|- -.+-++++|+++|+.+.+.|+
T Consensus 265 y~~m~~~a~~~i~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~hL~cF~~G~~-aLg--g~~~~~~~~~~~a~~L~~tC~~ 341 (503)
T 1hcu_A 265 YKDRWVLGADSTIGHLGSHPSTRKDLTFLSSYNGQSTSPNSGHLASFGGGNF-ILG--GILLNEQKYIDFGIKLASSYFG 341 (503)
T ss_dssp HHHHHHHHHHHHHHHTEECBTTCTTCCEECEEETTEEESEEEGGGGGHHHHH-HHH--HHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCCCCCCceEEEeccCCccccccchhhhhhhHHH-Hhc--CcccccHHHHHHHHHHHHHHHH
Confidence 67666666666655432110 000 00 0011 12567777763 222 123367899999987654432
Q ss_pred --------chhhhhcCC--C-------C---------CCCcc-cCcc---c-cchHHHHHHHHhCChHHHHHHHHHHHHh
Q 005721 143 --------LGLLALQAD--D-------I---------SGFHS-NTHI---P-IVIGSQMRYEVTGDQLHKTISMFFMDIV 191 (681)
Q Consensus 143 --------~~~l~~~~D--~-------l---------~g~Ha-nthi---P-~~~G~a~~Y~~TGd~~y~~aa~~f~d~v 191 (681)
+.|+...-+ . . .++.. ..|- | .++..-.+|++|||+.|++.+...++.+
T Consensus 342 ~y~~~~tGl~PE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~y~LRPE~iES~fylyR~TgD~~yre~gw~if~ai 421 (503)
T 1hcu_A 342 TYTQTASGIGPEGFAWVDSVTGAGGSPPSSQSGFYSSAGFWVTAPYYILRPETLESLYYAYRVTGDSKWQDLAWEALSAI 421 (503)
T ss_dssp HHHTSSSSCCCSEEECCBTTTCCSCCCCGGGHHHHHHHSCEEEECCBCCCCHHHHHHHHHHHHHCBHHHHHHHHHHHHHH
T ss_pred HHHhCccCCCceEEEeecCccccccCCcccccccccCCCceeccccccCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 112111000 0 0 01100 0111 2 3567788899999999999999999998
Q ss_pred hccceeeecCCCCC
Q 005721 192 NSSHTYATGGTSVG 205 (681)
Q Consensus 192 ~~~h~y~tGG~s~~ 205 (681)
.+ |.-+-.|.++-
T Consensus 422 ~k-~~r~~~Gya~i 434 (503)
T 1hcu_A 422 ED-ACRAGSAYSSI 434 (503)
T ss_dssp HH-HHEETTEECCB
T ss_pred HH-HHhhccCCccc
Confidence 74 66566666653
No 42
>1g87_A Endocellulase 9G; endoglucanase, cellulose binding domain, (ALPH 6-helix barrel, beta barrel, hydrolase; 1.60A {Clostridium cellulolyticum} SCOP: a.102.1.2 b.2.2.2 PDB: 1ga2_A* 1k72_A* 1kfg_A*
Probab=91.19 E-value=8.4 Score=44.01 Aligned_cols=172 Identities=12% Similarity=0.120 Sum_probs=89.0
Q ss_pred chHHHHHHHHHHHHHHHhhhhCCCceee-ccCC-----chhhhhhccCCCccccc---------chHH-HHHHHHHHHHH
Q 005721 7 NESLKEKMSAVVSALSACQKEIGSGYLS-AFPT-----EQFDRLEALIPVWAPYY---------TIHK-ILAGLLDQYTY 70 (681)
Q Consensus 7 D~~L~~k~~~~V~~l~~~Q~~~~dGYl~-~~~~-----~~~~~~~~~~~~W~pyy---------~~Hk-I~aGLld~y~~ 70 (681)
-+.+++.++.-.|.|++|+. .+|.|- -.-. ..+.+-|..... -|-| ..-. .-|+|-.+++.
T Consensus 90 ~~d~ldeikwg~Dyllk~~~--~~~~~y~qVGdg~~DH~~w~~pe~~~~~-r~~y~v~~~~pgsd~a~e~AAAlAaAS~v 166 (614)
T 1g87_A 90 TKYIMDGIKWANDYFIKCNP--TPGVYYYQVGDGGKDHSWWGPAEVMQME-RPSFKVDASKPGSAVCASTAASLASAAVV 166 (614)
T ss_dssp HHHHHHHHHHHHHHHHHTCC--STTCEEEEESCHHHHHTCCSCGGGCCSC-CCEEEECSSSCCHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHhcc--CCCcEEEEecCCCcCccccCCcccCCCC-CcceEecCCCCccHHHHHHHHHHHHHHHh
Confidence 46889999999999999975 333221 1100 112222221100 1222 1111 23333344444
Q ss_pred cCC------HHHHHHHHHHHHHHHHHhhhhhhccccc-cccc--cccccccchHHHHHHHHHhcCCHHHHHHHhhccccc
Q 005721 71 ADN------AEALRMTTWMVEYFYNRVQNVIKKYSIE-RHWQ--TLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDKPC 141 (681)
Q Consensus 71 tG~------~~aL~va~~~ad~~~~~~~~~~~~~~~~-~~~~--~l~~E~GGmne~L~~LY~~TGd~~yL~lA~~f~~~~ 141 (681)
-.+ ++.|+.|+++-+|..+.-... . .+.. .... ....| +..+-+|||..|||+.||+.|+.+...
T Consensus 167 fk~~D~~yA~~~L~~Ak~l~~fA~~~~~~~-~-~~~~~~~Y~ss~~~DE---l~WAAawLy~ATgd~~Yl~~a~~~~~~- 240 (614)
T 1g87_A 167 FKSSDPTYAEKCISHAKNLFDMADKAKSDA-G-YTAASGYYSSSSFYDD---LSWAAVWLYLATNDSTYLDKAESYVPN- 240 (614)
T ss_dssp HTTTCHHHHHHHHHHHHHHHHHHHHHCCCT-T-CCTTTTTSCCSCSHHH---HHHHHHHHHHHHCCHHHHHHHHHTGGG-
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHHcCCCC-C-CCcCcCCcCCCCchhH---HHHHHHHHHHHhCCHHHHHHHHHHHHh-
Confidence 332 578888999988887642211 0 0000 0000 01112 345778999999999999999865322
Q ss_pred cchhhhhcCC--CCCCCc-ccCccccchHHHHH-HHHhCChHHHHHHHHHHHHhh
Q 005721 142 FLGLLALQAD--DISGFH-SNTHIPIVIGSQMR-YEVTGDQLHKTISMFFMDIVN 192 (681)
Q Consensus 142 ~~~~l~~~~D--~l~g~H-anthiP~~~G~a~~-Y~~TGd~~y~~aa~~f~d~v~ 192 (681)
+.. ..+.. ...+.+ .+ -+..|+..+ .++++++.|++.++.+.+...
T Consensus 241 ~~~--~~~~~~~~~~~~~~Wd---~~~~g~~~lla~~~~~~~~~~~~~~~~~~~~ 290 (614)
T 1g87_A 241 WGK--EQQTDIIAYKWGQCWD---DVHYGAELLLAKLTNKQLYKDSIEMNLDFWT 290 (614)
T ss_dssp SCB--CTTSSSBCCSSCCBTT---BCHHHHHHHHHHHHCCHHHHHHHHHHHHHHT
T ss_pred hcc--ccccccccccCCcCcc---chHHHHHHHHHhccCcHHHHHHHHHHHHHhh
Confidence 100 00000 000011 11 123565554 778999999999999887654
No 43
>2xfg_A Endoglucanase 1; hydrolase-sugar binding protein complex, family-9 glycoside hydrolase, hydrolase, sugar binding protein; 1.68A {Clostridium thermocellum}
Probab=90.85 E-value=16 Score=40.29 Aligned_cols=244 Identities=13% Similarity=0.128 Sum_probs=117.0
Q ss_pred chHHHHHHHHHHHHHHHhhhhCCCcee-eccCC-----chhhhhhcc---CCCcc-----cccchH-HHHHHHHHHHHHc
Q 005721 7 NESLKEKMSAVVSALSACQKEIGSGYL-SAFPT-----EQFDRLEAL---IPVWA-----PYYTIH-KILAGLLDQYTYA 71 (681)
Q Consensus 7 D~~L~~k~~~~V~~l~~~Q~~~~dGYl-~~~~~-----~~~~~~~~~---~~~W~-----pyy~~H-kI~aGLld~y~~t 71 (681)
-+.+++.++.-.|.|++|+. .+|-+ .-.-. ..+.+-|.. ++.|. |--..- ..-|+|-.+++.-
T Consensus 111 ~~d~ldeikwg~D~llk~~~--~~~~~y~qVgd~~~Dh~~W~~pe~~~~~R~~y~i~~~~pgsd~a~e~AAAlAaAS~vf 188 (466)
T 2xfg_A 111 YNHILNNIKWACDYFIKCHP--EKDVYYYQVGDGHADHAWWGPAEVMPMERPSYKVDRSSPGSTVVAETSAALAIASIIF 188 (466)
T ss_dssp HHHHHHHHHHHHHHHHHTCS--BTTEEEEEESCHHHHHTCCSCGGGCCSCCCEEEEESSSCCHHHHHHHHHHHHHHHHHT
T ss_pred chHHHHHHHHHHHHHHHhcc--CCCcEEEEeCCCCccccccCCcccCCCCCceeEecCCCCccHHHHHHHHHHHHHHHhc
Confidence 47889999999999999965 33322 11111 011111111 11110 111111 1233333444544
Q ss_pred CC------HHHHHHHHHHHHHHHHHhhhhhhccccc-ccc---ccccccccchHHHHHHHHHhcCCHHHHHHHhhccccc
Q 005721 72 DN------AEALRMTTWMVEYFYNRVQNVIKKYSIE-RHW---QTLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDKPC 141 (681)
Q Consensus 72 G~------~~aL~va~~~ad~~~~~~~~~~~~~~~~-~~~---~~l~~E~GGmne~L~~LY~~TGd~~yL~lA~~f~~~~ 141 (681)
.+ ++.|+.|+++-+|..+.-... . .+.. ... .....| +..+-+|||..|||+.||+.|+.+...
T Consensus 189 k~~D~~yA~~~L~~Ak~l~~fA~~~~~~~-~-~~~~~~~Y~s~s~~~DE---l~WAAawLy~ATgd~~Yl~~a~~~~~~- 262 (466)
T 2xfg_A 189 KKVDGEYSKECLKHAKELFEFADTTKSDD-G-YTAANGFYNSWSGFYDE---LSWAAVWLYLATNDSSYLDKAESYSDK- 262 (466)
T ss_dssp TTTCHHHHHHHHHHHHHHHHHHHHHCCCT-T-CCTTTTTSCCSSCSHHH---HHHHHHHHHHHHCCHHHHHHHHHTTTT-
T ss_pred cccCHHHHHHHHHHHHHHHHHHHhcCCcC-C-CCccccccCCCCCCchH---HHHHHHHHHHHhCCHHHHHHHHHHHHH-
Confidence 32 578888999988887643211 0 0100 000 011122 346778999999999999999865321
Q ss_pred cchhhhhcCCC--CCCCcccCccccchHHHH-HHHHhCCh-HHHHHHHHHHHHhhccceeeecCCCCCCCCCCCcccccC
Q 005721 142 FLGLLALQADD--ISGFHSNTHIPIVIGSQM-RYEVTGDQ-LHKTISMFFMDIVNSSHTYATGGTSVGEFWSDPKRLASN 217 (681)
Q Consensus 142 ~~~~l~~~~D~--l~g~HanthiP~~~G~a~-~Y~~TGd~-~y~~aa~~f~d~v~~~h~y~tGG~s~~E~f~~p~~l~~~ 217 (681)
+.. ..+... ..+.+. =-.+..|+.. +.++++++ .|++.++.+.+..... . .+.+. . ..|+.|.-
T Consensus 263 ~~~--~~~~~~~~~~~~~~--Wd~~~~g~~~lla~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~--~-~tp~Gl~~- 330 (466)
T 2xfg_A 263 WGY--EPQTNIPKYKWAQC--WDDVTYGTYLLLARIKNDNGKYKEAIERHLDWWTTG--Y--NGERI--T-YTPKGLAW- 330 (466)
T ss_dssp SCB--STTSSSBCCSSCCB--TTBCHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTC--B--TTBCC--C-BCTTSCBC-
T ss_pred hcc--ccccccccccCcCC--cchhHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHhc--c--CCCcc--c-cCCccccc-
Confidence 100 000000 000110 0013456555 36778887 8999888887765431 0 00000 0 01111110
Q ss_pred CCCCcccchhhHHHHHHHHHHhcccC-----CchhHHHHHHHHhhhcccccCCCCCCeEEEecCCC
Q 005721 218 LDSNTEESCTTYNMLKVSRHLFRWTK-----EIAYADYYERSLTNGVLGIQRGTEPGVMIYLLPLA 278 (681)
Q Consensus 218 l~~~~~EtCas~nmlkl~~~Lf~~tg-----d~~YaD~~EralyN~ila~q~~~~~g~~~Y~~pl~ 278 (681)
...-.-.=-+.|..+++..-..+++ +.+|.+...+.+ |=|||.- .+.|+.-.+
T Consensus 331 -~~~Wgs~~~~~n~afl~~~y~~~~~~~~~~~~~y~~~A~~qi-dYiLG~N------~~SyvvG~G 388 (466)
T 2xfg_A 331 -LDQWGSLRYATTTAFLACVYSDWENGDKEKAKTYLEFARSQA-DYALGST------GRSFVVGFG 388 (466)
T ss_dssp -CCSSSHHHHHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHH-HHHHTTT------SSCCBTTSS
T ss_pred -cCCCCchHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHHhH-HhhcCCC------CcceEeccC
Confidence 0001100012344444443445556 678888886654 7888752 235665554
No 44
>1ut9_A Cellulose 1,4-beta-cellobiosidase; hydrolase, glycoside hydrolase, family 9, cellobiohydrolase; 2.1A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 PDB: 1rq5_A*
Probab=90.30 E-value=11 Score=43.02 Aligned_cols=125 Identities=6% Similarity=-0.075 Sum_probs=65.3
Q ss_pred hHHHHHHHHHHHHHHHhhhhCCCceeeccC-----C---chh----hhhhcc---CCCcccccchH-HHHHHHHHHHHHc
Q 005721 8 ESLKEKMSAVVSALSACQKEIGSGYLSAFP-----T---EQF----DRLEAL---IPVWAPYYTIH-KILAGLLDQYTYA 71 (681)
Q Consensus 8 ~~L~~k~~~~V~~l~~~Q~~~~dGYl~~~~-----~---~~~----~~~~~~---~~~W~pyy~~H-kI~aGLld~y~~t 71 (681)
+.+++.++.-.|+|++||. ++|+-..+. . ..| .+=|+. +....|--..- .+-++|-.+++.-
T Consensus 227 ~d~ldeikwg~D~llk~q~--~~g~~~~~~g~v~~~~~D~~w~g~~~~Pe~~~~~R~~~~p~t~~~~~~AAalAaas~vf 304 (609)
T 1ut9_A 227 PDILDEARWEIEFFKKMQV--TEKEDPSIAGMVHHKIHDFRWTALGMLPHEDPQPRYLRPVSTAATLNFAATLAQSARLW 304 (609)
T ss_dssp CHHHHHHHHHHHHHHHHBC--CTTTCGGGTTCEECEEEESSCCCSSCCGGGCCSBEEECCEEHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcc--CCCCcceEEEEecCCCCCcccCCCCCChhhCCCceeecCCCcHHHHHHHHHHHHHHHhc
Confidence 6899999999999999998 777511110 0 001 000110 00111111111 1223343444443
Q ss_pred CC------HHHHHHHHHHHHHHHHHhhhhhhccc-c----cccccc--ccccccchHHHHHHHHHhcCCHHHHHHHhhc
Q 005721 72 DN------AEALRMTTWMVEYFYNRVQNVIKKYS-I----ERHWQT--LNEEAGGMNDVLYKLFCITQDPKHLMLAHLF 137 (681)
Q Consensus 72 G~------~~aL~va~~~ad~~~~~~~~~~~~~~-~----~~~~~~--l~~E~GGmne~L~~LY~~TGd~~yL~lA~~f 137 (681)
.+ ++.|+.|+++-+|..+.-........ . ...... ...| +..+-+|||..|||+.||+.|+..
T Consensus 305 k~~d~~ya~~~L~~A~~~~~fa~~~~~~y~~~~~~~~~~~~~~Y~ss~~~DE---l~WAAawLy~ATgd~~Yl~~a~~~ 380 (609)
T 1ut9_A 305 KDYDPTFAADCLEKAEIAWQAALKHPDIYAEYTPGSGGPGGGPYNDDYVGDE---FYWAACELYVTTGKDEYKNYLMNS 380 (609)
T ss_dssp TTTCHHHHHHHHHHHHHHHHHHHHCTTCCBCCCCSSSSCBSCCCCBSCCHHH---HHHHHHHHHHHHCCHHHHHHHHTS
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHhCcccccccccccCccCCCCCCCCCcccH---HHHHHHHHHHHhCCHHHHHHHHHh
Confidence 22 57888899988888753221100000 0 000000 1122 346778999999999999999865
No 45
>1tf4_A T. fusca endo/EXO-cellulase E4 catalytic domain and cellulose-binding domain; glycosyl hydrolase, cellulose degradation; 1.90A {Thermobifida fusca} SCOP: a.102.1.2 b.2.2.2 PDB: 1js4_A 3tf4_A* 4tf4_A*
Probab=89.57 E-value=9 Score=43.68 Aligned_cols=176 Identities=13% Similarity=0.030 Sum_probs=89.4
Q ss_pred CchHHHHHHHHHHHHHHHhhhhCCCceeec-cCC-----chhhhhhccCCCcccccc---------h-HHHHHHHHHHHH
Q 005721 6 HNESLKEKMSAVVSALSACQKEIGSGYLSA-FPT-----EQFDRLEALIPVWAPYYT---------I-HKILAGLLDQYT 69 (681)
Q Consensus 6 ~D~~L~~k~~~~V~~l~~~Q~~~~dGYl~~-~~~-----~~~~~~~~~~~~W~pyy~---------~-HkI~aGLld~y~ 69 (681)
+-+.+++.++.-.|.|++||. .+|.|-. .-. ..+.+.|... .--|-|. . -..-|+|-.+++
T Consensus 89 ~~~d~ldeikwg~Dyllk~~~--~~~~~y~qVGdg~~DH~~w~~pe~m~-~~r~~y~~~~~~pgsd~a~~~AAAlAaAS~ 165 (605)
T 1tf4_A 89 QMPYLKDNLRWVNDYFIKAHP--SPNVLYVQVGDGDADHKWWGPAEVMP-MERPSFKVDPSCPGSDVAAETAAAMAASSI 165 (605)
T ss_dssp CHHHHHHHHHHHHHHHHHTCS--BTTBEEEEESCHHHHHHCCSCGGGCC-SCCCEEEEBTTBCCHHHHHHHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHHhcc--CCCeEEEEeCCCCcCccccCChhhCC-CCCceeEecCCCCcchHHHHHHHHHHHHHh
Confidence 347799999999999999997 4432211 000 0122222211 1112221 1 113334434444
Q ss_pred HcC------CHHHHHHHHHHHHHHHHHhhhhhhccccccc---cccccccccchHHHHHHHHHhcCCHHHHHHHhhcccc
Q 005721 70 YAD------NAEALRMTTWMVEYFYNRVQNVIKKYSIERH---WQTLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDKP 140 (681)
Q Consensus 70 ~tG------~~~aL~va~~~ad~~~~~~~~~~~~~~~~~~---~~~l~~E~GGmne~L~~LY~~TGd~~yL~lA~~f~~~ 140 (681)
.-. .++.|+.|+++-+|..+.-+......+.... |.....| +..+-+|||..|||++||+.|+.+...
T Consensus 166 vfk~~D~~yA~~~L~~Ak~~~~fA~~~~g~y~~~~~~~~~Y~s~s~~~DE---l~WAAawLy~ATgd~~Yl~~a~~~~~~ 242 (605)
T 1tf4_A 166 VFADDDPAYAATLVQHAKQLYTFADTYRGVYSDCVPAGAFYNSWSGYQDE---LVWGAYWLYKATGDDSYLAKAEYEYDF 242 (605)
T ss_dssp HHTTTCHHHHHHHHHHHHHHHHHHHHSCCCGGGTSTTHHHHCCSSCSHHH---HHHHHHHHHHHHCCHHHHHHHHHHGGG
T ss_pred hccccCHHHHHHHHHHHHHHHHHHHHcCCCcCCCCCccccccCCCCCchH---HHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 433 2578888888888886532111000000000 0001122 346778999999999999998764321
Q ss_pred ccchhhhhcCC--CCCCCcccCccccchHHHH-HHHHhCChHHHHHHHHHHHHhh
Q 005721 141 CFLGLLALQAD--DISGFHSNTHIPIVIGSQM-RYEVTGDQLHKTISMFFMDIVN 192 (681)
Q Consensus 141 ~~~~~l~~~~D--~l~g~HanthiP~~~G~a~-~Y~~TGd~~y~~aa~~f~d~v~ 192 (681)
--.. ...+ ...+.|.= -.+..|... +.++++++.|++.++.+.+...
T Consensus 243 ~~~~---~~~~~~~~~~~~~W--d~~~~g~~~lla~~~~~~~y~~~a~~~~~~~~ 292 (605)
T 1tf4_A 243 LSTE---QQTDLRSYRWTIAW--DDKSYGTYVLLAKETGKQKYIDDANRWLDYWT 292 (605)
T ss_dssp SCBC---TTSSCBCCSSCCSS--SCCHHHHHHHHHHHHCCHHHHHHHHHHHHHTT
T ss_pred cccc---cccccccccccccc--cchHHHHHHHHHhccChHHHHHHHHHHHHHHh
Confidence 0000 0000 00011100 012345544 3678999999999999888654
No 46
>2g0d_A Nisin biosynthesis protein NISC; alpha toroid, alpha barrel, biosynthetic protein; 2.21A {Lactococcus lactis subsp} SCOP: a.102.6.1 PDB: 2g02_A
Probab=85.65 E-value=11 Score=40.28 Aligned_cols=69 Identities=6% Similarity=-0.084 Sum_probs=51.3
Q ss_pred HHHHHHHhCChHHHHHHHHHHHHhhccceeeecCCCCCCCCCCCcccccCCCCCcccchhhHHHHHHHHHHhcccCCchh
Q 005721 168 SQMRYEVTGDQLHKTISMFFMDIVNSSHTYATGGTSVGEFWSDPKRLASNLDSNTEESCTTYNMLKVSRHLFRWTKEIAY 247 (681)
Q Consensus 168 ~a~~Y~~TGd~~y~~aa~~f~d~v~~~h~y~tGG~s~~E~f~~p~~l~~~l~~~~~EtCas~nmlkl~~~Lf~~tgd~~Y 247 (681)
....|+.++|++|++.++...+.+.++ ++ . ....+=.|...+++.+...|++.++|++|
T Consensus 288 l~~~~~~~~d~~~~~~a~~~~~~~~~~-----~~-----~-----------~~~~~LCHG~aG~~~~l~~l~~~~~~~~~ 346 (409)
T 2g0d_A 288 YLYGGLALDNDYFVDKAEKILESAMQR-----KL-----G-----------IDSYMICHGYSGLIEICSLFKRLLNTKKF 346 (409)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHH-----CT-----T-----------CCSCCTTTSHHHHHHHHHHHHHHHCCCTT
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHh-----cc-----C-----------CCCCCCCChHHHHHHHHHHHHHHhCCHHH
Confidence 456689999999999999888887754 11 0 11123344667888888999999999999
Q ss_pred HHHHHHHHhh
Q 005721 248 ADYYERSLTN 257 (681)
Q Consensus 248 aD~~EralyN 257 (681)
.+.+++..+.
T Consensus 347 ~~~a~~~~~~ 356 (409)
T 2g0d_A 347 DSYMEEFNVN 356 (409)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHcCCc
Confidence 9998885444
No 47
>2v8i_A Pectate lyase; periplasm, beta-elimination, pectin degradation; 1.50A {Yersinia enterocolitica} PDB: 2v8k_A* 2v8j_A
Probab=84.86 E-value=1.5 Score=47.91 Aligned_cols=73 Identities=12% Similarity=0.048 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhhhhhcccc-ccccc---cccccccchHHHHHHHHHhcCCHHHHHHHh
Q 005721 60 ILAGLLDQYTYADNAEALRMTTWMVEYFYNRVQNVIKKYSI-ERHWQ---TLNEEAGGMNDVLYKLFCITQDPKHLMLAH 135 (681)
Q Consensus 60 I~aGLld~y~~tG~~~aL~va~~~ad~~~~~~~~~~~~~~~-~~~~~---~l~~E~GGmne~L~~LY~~TGd~~yL~lA~ 135 (681)
.+..++-+|+..++++..++++.|+.-+. ++++ ..... +.-+. ....-+ +..+|.+||+.|++++||+||.
T Consensus 378 yll~~vra~~~s~D~~Lw~~~~~ma~~~~--lgdi-~~~~~~~~~~~~~~~~~sp~--lL~allEL~~atq~~~~l~lA~ 452 (543)
T 2v8i_A 378 FLISYARAYAIDNDPLLWKVARGIANDQG--LGDI-GTAPGKEVKVNMDTTNSDPY--ALFALLDLYHASQVADYRKLAE 452 (543)
T ss_dssp HHHHHHHHHHHSCCHHHHHHHHHHHHHTT--CEEC-TTBTTBSCEECTTCCCCCHH--HHHHHHHHHHHHCCHHHHHHHH
T ss_pred hhHHHHHHHHcCCCHHHHHHHHHHHhhCC--cccc-CCCcCcccccccCCCCcCHH--HHHHHHHHHHHhCCHHHHHHHH
Confidence 44556789999999999999999887652 1111 11000 00000 000000 2368999999999999999998
Q ss_pred hc
Q 005721 136 LF 137 (681)
Q Consensus 136 ~f 137 (681)
.+
T Consensus 453 ~~ 454 (543)
T 2v8i_A 453 KI 454 (543)
T ss_dssp HH
T ss_pred HH
Confidence 75
No 48
>2g0d_A Nisin biosynthesis protein NISC; alpha toroid, alpha barrel, biosynthetic protein; 2.21A {Lactococcus lactis subsp} SCOP: a.102.6.1 PDB: 2g02_A
Probab=82.85 E-value=4.9 Score=42.95 Aligned_cols=116 Identities=8% Similarity=-0.103 Sum_probs=68.1
Q ss_pred HHHHHHHHHHHcC--CHHHHHHHHHHHHHHHHHhhh-hhhc-ccc-------------------cccccccccccc--ch
Q 005721 60 ILAGLLDQYTYAD--NAEALRMTTWMVEYFYNRVQN-VIKK-YSI-------------------ERHWQTLNEEAG--GM 114 (681)
Q Consensus 60 I~aGLld~y~~tG--~~~aL~va~~~ad~~~~~~~~-~~~~-~~~-------------------~~~~~~l~~E~G--Gm 114 (681)
|+.-|..+| .+| +++.++.+.+.++|+.+.... .-.. ++. --+| -+| |+
T Consensus 211 i~~~L~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~wp~g~~~~~~~~~~~~~~~~~~~~~W-----ChG~~Gi 284 (409)
T 2g0d_A 211 VGCILAYAH-IKGYSNEASLSALQKIIFIYEKFELERKKQFLWKDGLVADELKKEKVIREASFIRDAW-----CYGGPGI 284 (409)
T ss_dssp HHHHHHHHH-HHTCCCHHHHHHHHHHHHHHHHHCCCGGGTTCCCSEECHHHHHHTSCCSCCSCCCCCS-----SSSHHHH
T ss_pred HHHHHHHHH-HhCCCChhHHHHHHHHHHHHHHHHhcCCCCCcCCCccccHhhhcccccccCCCCCCcC-----CCCCHHH
Confidence 443333344 455 889999999999999654221 0000 000 0012 234 78
Q ss_pred HHHHHHHHHhcCCHHHHHHHhhccccccchhhhhcCCCCCCCcccCcccc--chHHHHHHHHhCChHHHHHHHHH
Q 005721 115 NDVLYKLFCITQDPKHLMLAHLFDKPCFLGLLALQADDISGFHSNTHIPI--VIGSQMRYEVTGDQLHKTISMFF 187 (681)
Q Consensus 115 ne~L~~LY~~TGd~~yL~lA~~f~~~~~~~~l~~~~D~l~g~HanthiP~--~~G~a~~Y~~TGd~~y~~aa~~f 187 (681)
..++..+|+.++|++|++.|+...+..+-. ......+.--|... ..-....|+.|+|+.|++.+..|
T Consensus 285 ~~~l~~~~~~~~d~~~~~~a~~~~~~~~~~------~~~~~~~~LCHG~aG~~~~l~~l~~~~~~~~~~~~a~~~ 353 (409)
T 2g0d_A 285 SLLYLYGGLALDNDYFVDKAEKILESAMQR------KLGIDSYMICHGYSGLIEICSLFKRLLNTKKFDSYMEEF 353 (409)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHH------CTTCCSCCTTTSHHHHHHHHHHHHHHHCCCTTHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHh------ccCCCCCCCCChHHHHHHHHHHHHHHhCCHHHHHHHHHc
Confidence 899999999999999999998764322110 00001112223332 12256679999999999887763
No 49
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A*
Probab=81.90 E-value=2.8 Score=47.13 Aligned_cols=127 Identities=13% Similarity=0.055 Sum_probs=68.0
Q ss_pred hHHHHHHHHHHHHHHHhhhhCCCceeec-cCCchh----hhhhcc---CCCcccccch-HHHHHHHHHHHHHcCC-----
Q 005721 8 ESLKEKMSAVVSALSACQKEIGSGYLSA-FPTEQF----DRLEAL---IPVWAPYYTI-HKILAGLLDQYTYADN----- 73 (681)
Q Consensus 8 ~~L~~k~~~~V~~l~~~Q~~~~dGYl~~-~~~~~~----~~~~~~---~~~W~pyy~~-HkI~aGLld~y~~tG~----- 73 (681)
+.+++.++.-+|+|++||... +|.+-. .-...| .+=++. +..+..--+. -.+-++|-.+++.-.+
T Consensus 188 ~d~ldeikwg~D~llk~~~~~-~g~~y~~v~~~~w~g~~~~Pe~~~~~R~~~~~~t~~~~~~AAalA~as~vf~~~D~~y 266 (537)
T 3gzk_A 188 PPALEVAREEIAWLLTMQDPA-TGGVYHKVTTPSFPPLDTRPEDDDAPLVLSPISYAATATFCAAMAHAALVYRPFDPAL 266 (537)
T ss_dssp CHHHHHHHHHHHHHHHTBCTT-TCCBBSEEECSSCCCTTCCGGGCCSCEEECCBCHHHHHHHHHHHHHHHHHHTTTCHHH
T ss_pred HHHHHHHHHHHHHHHhcccCC-CCeEEEEecCCCcCCCCcCcccCCCcceEeecCCcHHHHHHHHHHHHHHhhcccCHHH
Confidence 689999999999999999721 132211 000001 010111 1111111111 1233444456666676
Q ss_pred -HHHHHHHHHHHHHHHHHhhhhhhc-ccc-ccccc--cccccccchHHHHHHHHHhcCCHHHHHHHhhcc
Q 005721 74 -AEALRMTTWMVEYFYNRVQNVIKK-YSI-ERHWQ--TLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFD 138 (681)
Q Consensus 74 -~~aL~va~~~ad~~~~~~~~~~~~-~~~-~~~~~--~l~~E~GGmne~L~~LY~~TGd~~yL~lA~~f~ 138 (681)
++.|+.|+++-+|+.+.-...... ... ..... ....| +..+.+|||+.|||+.||+.|+.+.
T Consensus 267 A~~~L~~A~~~~~fa~~~~~~~~~~~~~~~~~~Y~~~~~~De---l~wAA~~Ly~aTgd~~Yl~~a~~~~ 333 (537)
T 3gzk_A 267 SSCCADAARRAYAWLGAHEMQPFHNPDGILTGEYGDAELRDE---LLWASCALLRMTGDSAWARVCEPLL 333 (537)
T ss_dssp HHHHHHHHHHHHHHHHTSCCCCCCCCTTCCSCCCCCSCCHHH---HHHHHHHHHHHHCCGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcccccccCCcccccCCcCCCccchH---HHHHHHHHHHHhCCHHHHHHHHHhh
Confidence 789999999999987532211000 000 00000 01122 4568889999999999999998653
No 50
>2yug_A Protein FRG1; spliceosome, facioscapulohumeral muscular dystrophy, FSHD1, beta-trefoil, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=73.21 E-value=36 Score=31.61 Aligned_cols=92 Identities=14% Similarity=0.165 Sum_probs=55.7
Q ss_pred eeEEEecCCCceEeeecCCC--CCccccceEEEEEecCCCCCCcccccCCCCcccccCCCCCCCceEEeecCCcceEEec
Q 005721 494 TKFVLTNSNQSITMEKFPKS--GTDAALHATFRLILNDSSGSEFSSLNDFIGKSVMLEPFDSPGMLVIQHETDDELVVTD 571 (681)
Q Consensus 494 ~~~~~~~~~~~~~~~~~p~~--g~~~~~~~~~r~~~~~~~~~~~~~p~~~~g~~v~lepfd~Pg~~v~~~~~~~~l~v~~ 571 (681)
..|..+..+|.+++.+ |.. +....-.-+|.+..-+ ++.+.|.... |.|++-... ..|. .+
T Consensus 34 ~~y~~A~~~G~~t~~~-~~~~~~~~~~~~E~f~l~~~~-------------~~~v~LRs~~--GkYLs~~~~-G~v~-a~ 95 (155)
T 2yug_A 34 GAYIHALDNGLFTLGA-PHREVDEGPSPPEQFTAVKLS-------------DSRIALKSGY--GKYLGINSD-GLVV-GR 95 (155)
T ss_dssp SCBEEECTTSCEEECC-CCSSSSCCCCTTTCEEEEECS-------------SSCEEEEETT--SCBEEECSS-SBEE-EC
T ss_pred CCEEEEEcCCcEEEcc-ccccccCCCCCcceEEEEECC-------------CCEEEEEeCC--CCEEEecCC-CcEE-ec
Confidence 3566666677665542 322 4444556688877421 1234444433 777776432 2233 33
Q ss_pred CCCCCCcceEEEeeccCCCCCeEEEeecCCcceEEEEe
Q 005721 572 SFIAQGSSVFHLVAGLDGGDRTVSLESETYKGCFVYTA 609 (681)
Q Consensus 572 ~~~~~~~s~f~~vpgl~g~~~~vsle~~~~pg~~~~~~ 609 (681)
..+-.+..+|.+++- + |.+.|.+. -|+||.+.
T Consensus 96 a~~~g~~E~F~l~~~-~---G~~aLra~--nG~yl~~~ 127 (155)
T 2yug_A 96 SDAIGPREQWEPVFQ-D---GKMALLAS--NSCFIRCN 127 (155)
T ss_dssp CSSCCTTTBEEEECS-T---TCCEEEET--TSCBEEEC
T ss_pred cCCCCCCCEEEEEEE-C---CEEEEEeC--CCCEEEEc
Confidence 455568899999986 3 57999993 49999975
No 51
>2yik_A Endoglucanase; hydrolase; 2.10A {Clostridium thermocellum}
Probab=66.40 E-value=20 Score=40.93 Aligned_cols=129 Identities=12% Similarity=0.085 Sum_probs=64.7
Q ss_pred chHHHHHHHHHHHHHHHhh----hhCCCceeeccCCc-----hhhhhhc---cCCCcc-----cccc-hHHHHHHHHHHH
Q 005721 7 NESLKEKMSAVVSALSACQ----KEIGSGYLSAFPTE-----QFDRLEA---LIPVWA-----PYYT-IHKILAGLLDQY 68 (681)
Q Consensus 7 D~~L~~k~~~~V~~l~~~Q----~~~~dGYl~~~~~~-----~~~~~~~---~~~~W~-----pyy~-~HkI~aGLld~y 68 (681)
-+.+++.++.-.|+|++|| +..++++..-.... .+.+-|. .+..|. |--. .-..-|+|-.++
T Consensus 151 ~~d~ldeikwg~Dyllkmq~~~~~~~~g~~y~qVgdg~~Dh~~w~~Pe~~~~~R~~y~v~~~~pgsd~a~~~AAAlAaAS 230 (611)
T 2yik_A 151 AVHAEVILRYFNDYFMRCTFRDASGNVVAFCHQVGDGDIDHAFWGAPENDTMFRRGWFITKEKPGTDIISATAASLAINY 230 (611)
T ss_dssp HHHHHHHHHHHHHHHHHTEEECTTSCEEEEEEEESCHHHHTTCCSCGGGCCSCCCEEEEBTTBCCHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHcccccccCCCCcEEEEeCCCCccccCCCChhhCCCCCcceeecCCCCccHHHHHHHHHHHHHH
Confidence 4788999999999999996 42111111111110 1111111 122221 1110 011233443444
Q ss_pred HHcCC------HHHHHHHHHHHHHHHHHhhhhhhccccc-cccc--cccccccchHHHHHHHHHhcCCHHHHHHHhhcc
Q 005721 69 TYADN------AEALRMTTWMVEYFYNRVQNVIKKYSIE-RHWQ--TLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFD 138 (681)
Q Consensus 69 ~~tG~------~~aL~va~~~ad~~~~~~~~~~~~~~~~-~~~~--~l~~E~GGmne~L~~LY~~TGd~~yL~lA~~f~ 138 (681)
+.-.+ ++.|+.|+++-+|..+.-.......+.. .... ....| +..+-+|||..|||+.||+.|+.+.
T Consensus 231 ~vfk~~D~~yA~~~L~~Ak~~~~fA~~~~~~y~~~~~~~~~~Y~ss~~~DE---l~WAAawLy~ATgd~~Yl~~a~~~~ 306 (611)
T 2yik_A 231 MNFKDTDPQYAAKSLDYAKALFDFAEKNPKGVVQGEDGPKGYYGSSKWQDD---YCWAAAWLYLATQNEHYLDEAFKYY 306 (611)
T ss_dssp HHHTTTCHHHHHHHHHHHHHHHHHHHHSCCCCCCGGGTTTTTSCCCCSHHH---HHHHHHHHHHHHCCHHHHHHHHHHC
T ss_pred HhccccCHHHHHHHHHHHHHHHHHHHHcCCcccCCCcccCcCCCCCCcccH---HHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 44332 5788888888888865322110000000 0000 01112 3367789999999999999998653
No 52
>1clc_A Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycosyl hydrolase; 1.90A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2
Probab=65.99 E-value=12 Score=42.85 Aligned_cols=128 Identities=10% Similarity=0.030 Sum_probs=63.9
Q ss_pred chHHHHHHHHHHHHHHHhhhhCCCcee-eccCCchhhhhhccCCCcccccch---HH----HHHHHHHHHHHcC------
Q 005721 7 NESLKEKMSAVVSALSACQKEIGSGYL-SAFPTEQFDRLEALIPVWAPYYTI---HK----ILAGLLDQYTYAD------ 72 (681)
Q Consensus 7 D~~L~~k~~~~V~~l~~~Q~~~~dGYl-~~~~~~~~~~~~~~~~~W~pyy~~---Hk----I~aGLld~y~~tG------ 72 (681)
-+.+++.++.-.|+|++||...++|.+ .......++-+....+.-.|.|.. .. .-|+|-.+++.-.
T Consensus 231 ~~d~ldeikwg~Dyllk~q~~~~~g~~y~~vgd~~~~~~~~Pe~~~~~R~~~~~~s~~a~e~AAAlAaAS~vfk~~D~~y 310 (639)
T 1clc_A 231 IPDFLDELKYEIDWILTMQYPDGSGRVAHKVSTRNFGGFIMPENEHDERFFVPWSSAATADFVAMTAMAARIFRPYDPQY 310 (639)
T ss_dssp SCHHHHHHHHHHHHHHTTBCTTSSCCBEEEEECSSCCCSCCGGGCCSCCEEEEECHHHHHHHHHHHHHHHHHHTTTCHHH
T ss_pred HHHHHHHHHHHHHHHHHhccccCCCeEEEEecCCCCCCCCCchhcCCCceEecCCcHHHHHHHHHHHHHHHhccccCHHH
Confidence 478999999999999999983220332 111000011000000011122211 11 2233334444433
Q ss_pred CHHHHHHHHHHHHHHHHHhhhhhhcc-cc-ccccc--cccccccchHHHHHHHHHhcCCHHHHHHHhhc
Q 005721 73 NAEALRMTTWMVEYFYNRVQNVIKKY-SI-ERHWQ--TLNEEAGGMNDVLYKLFCITQDPKHLMLAHLF 137 (681)
Q Consensus 73 ~~~aL~va~~~ad~~~~~~~~~~~~~-~~-~~~~~--~l~~E~GGmne~L~~LY~~TGd~~yL~lA~~f 137 (681)
.++.|+.|+++-+|..+.-......- .. ..... ....| +..+-+|||..|||+.||+.|+..
T Consensus 311 A~~~L~~Ak~l~~fA~~~~~~~y~~~~~~~~g~Y~ss~~~DE---l~WAAawLy~ATgd~~Yl~~a~~~ 376 (639)
T 1clc_A 311 AEKCINAAKVSYEFLKNNPANVFANQSGFSTGEYATVSDADD---RLWAAAEMWETLGDEEYLRDFENR 376 (639)
T ss_dssp HHHHHHHHHHHHHHHHHCCSCCCCCCTTCCSCCCCCSCSHHH---HHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCccCCCccccccccCCCCcchH---HHHHHHHHHHHhCCHHHHHHHHHH
Confidence 35788888888888865321100000 00 00000 01122 346778999999999999998765
No 53
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus}
Probab=65.78 E-value=21 Score=40.44 Aligned_cols=137 Identities=9% Similarity=0.112 Sum_probs=75.2
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhhhhhcccccccccc--------ccccccch-HHHHHHHHHhcCCHHHH
Q 005721 61 LAGLLDQYTYADNAEALRMTTWMVEYFYNRVQNVIKKYSIERHWQT--------LNEEAGGM-NDVLYKLFCITQDPKHL 131 (681)
Q Consensus 61 ~aGLld~y~~tG~~~aL~va~~~ad~~~~~~~~~~~~~~~~~~~~~--------l~~E~GGm-ne~L~~LY~~TGd~~yL 131 (681)
+-|++.-|++||+++.|+-+...++.+..++... + ...-.|.. .+....|+ ..+|.+|.++++|+++.
T Consensus 309 ~WAA~eLy~ATgd~~YL~~a~~~a~~l~~~~~~~-~--~~g~~w~~~d~~~r~~~d~a~~gl~~iaLl~l~~~~~d~~~~ 385 (586)
T 3h7l_A 309 LLASVELFKATKETRYLEESRLWAQRLVARQMSD-E--QIQHFWSANQDGSRPYFHAAEAGLPTIALCEYLAIEDDSVQT 385 (586)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHHHHHTTEECC-S--SCSSEEBSSSSSSSBCCCTTTTTHHHHHHHHHHHHCCSTTTT
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccCC-c--cCCCcCCCcccCCcccccccccHHHHHHHHHhhhhcCChHHH
Confidence 3455689999999999999999999887665321 0 00111221 11122344 37899999999987544
Q ss_pred HHHhhccccccch----------h------hhhcCCCC--CC---Cccc-----Ccccc--c--hH--HHHHHHHhCC--
Q 005721 132 MLAHLFDKPCFLG----------L------LALQADDI--SG---FHSN-----THIPI--V--IG--SQMRYEVTGD-- 177 (681)
Q Consensus 132 ~lA~~f~~~~~~~----------~------l~~~~D~l--~g---~Han-----thiP~--~--~G--~a~~Y~~TGd-- 177 (681)
+.|+......... | ..+..+.. .+ .|.+ .|... + .+ ++..|..++|
T Consensus 386 ~~a~~~i~~~~d~~l~~~~~~~npfg~~~~~~~~~~~~~~~~y~~p~~~~~~y~WqGsN~~~an~a~~~~~a~~~~~~~~ 465 (586)
T 3h7l_A 386 ESVKCIVNRACEFEIKISNKVTNPFGYPRQYVKGVNESKRDAFFVAHNNESGYWWQGENARLGSLATMAYLAQPHIASQE 465 (586)
T ss_dssp HHHHHHHHHHHHHHHHHHHSSCCSSCCCCEEECCTTSCCEEESSCCSSSTTSSCCCCCHHHHHHHHHHHHHSGGGCCCHH
T ss_pred HHHHHHHHHHhhhhhhhcccccCccccHHHHhhhhccccccccccccCCCCCCeeeChHHHHHHHHHHHHHHHHhcCCch
Confidence 4443321111100 0 00000000 00 1211 11111 1 11 3344688999
Q ss_pred --hHHHHHHHHHHHHhhccc----eeeec
Q 005721 178 --QLHKTISMFFMDIVNSSH----TYATG 200 (681)
Q Consensus 178 --~~y~~aa~~f~d~v~~~h----~y~tG 200 (681)
++|++.+..-+|.|.... +|++|
T Consensus 466 ~~~~y~~~a~~qldyiLG~Np~~~s~v~G 494 (586)
T 3h7l_A 466 IQQQLSVFAQDALNWIVGLNPYDMCMLDG 494 (586)
T ss_dssp HHHHHHHHHHHHHHHHBTCSTTCCBCBTT
T ss_pred hHHHHHHHHHHhhhhhccCCCCCCccEEe
Confidence 899999999999886543 67777
No 54
>2w87_A Esterase D, XYL-CBM35; plant cell WALL degradation, carbohydrate protein binding, xylan, CMB35, glucuronic acid, hydrolase; HET: GCU; 1.60A {Cellvibrio japonicus} PDB: 2w46_A
Probab=55.07 E-value=40 Score=30.45 Aligned_cols=38 Identities=18% Similarity=0.239 Sum_probs=26.5
Q ss_pred EEEEEEEeCCCCeeeEEEEeccC-CccCCCcEEEECCeec
Q 005721 360 RVTLTFSSKGSGLTTSLNLRIPT-WTSSNGAKATLNGQDL 398 (681)
Q Consensus 360 ~V~itv~~~~~~~~ftL~LRIP~-Wa~~~~~~v~VNG~~~ 398 (681)
.|+++|+.. +....+|.+|.-. +.......|.|||..+
T Consensus 40 ~v~~~V~v~-~aG~Y~l~~ryang~~~~r~~~l~VNG~~~ 78 (139)
T 2w87_A 40 AVVWAIDAT-SSGRRTLTIRYANGGTANRNGSLVINGGSN 78 (139)
T ss_dssp EEEEEEEES-SCEEEEEEEEEECCSSSCCCEEEEETTTTT
T ss_pred EEEEEEECC-CCcEEEEEEEEECCCCCCceEEEEECCEEc
Confidence 567777763 5678889999864 3222258999999865
No 55
>2w3j_A Carbohydrate binding module; sugar-binding protein, family 35, uronic acid sugars; 1.70A {Uncultured bacterium}
Probab=47.71 E-value=67 Score=29.17 Aligned_cols=38 Identities=21% Similarity=0.264 Sum_probs=26.6
Q ss_pred EEEEEEEeCCCCeeeEEEEecc-CCccCCCcEEEECCeec
Q 005721 360 RVTLTFSSKGSGLTTSLNLRIP-TWTSSNGAKATLNGQDL 398 (681)
Q Consensus 360 ~V~itv~~~~~~~~ftL~LRIP-~Wa~~~~~~v~VNG~~~ 398 (681)
.|+++|+.. +....+|.+|.- +........|.|||+.+
T Consensus 40 ~v~~~V~v~-~aG~Y~l~~ryang~~~~r~~~l~VNG~~~ 78 (145)
T 2w3j_A 40 SIVWSLSAA-SAKTYTAQIRFGNGGTSARRATVVVNDSQI 78 (145)
T ss_dssp EEEEEEEES-SCEEEEEEEEEECCSSSCCCEEEEETTEEE
T ss_pred EEEEEEECC-CCeEEEEEEEEECCCCCCeEEEEEECCeEe
Confidence 577777763 567888999986 33222257999999875
No 56
>2kll_A Interleukin-33; beta-trefoil, cytokine, polymorphism, secreted; NMR {Homo sapiens}
Probab=42.73 E-value=1.9e+02 Score=26.15 Aligned_cols=113 Identities=18% Similarity=0.258 Sum_probs=67.0
Q ss_pred CCccceeeeeecCCeeEEEecCCCceEeeecCCCCCccccceEEEEEecCCCCCCcccccCCCCcccc--cCCCCCCCce
Q 005721 480 YNSQLITFTQEYGNTKFVLTNSNQSITMEKFPKSGTDAALHATFRLILNDSSGSEFSSLNDFIGKSVM--LEPFDSPGML 557 (681)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~g~~~~~~~~~r~~~~~~~~~~~~~p~~~~g~~v~--lepfd~Pg~~ 557 (681)
+|+|-++|.-++|.-...+.. .- +...--...||.......++ ..--+.+|+.+| |.|-- .-.
T Consensus 20 YNDQsitFv~EdgsYeIyveD---------l~--kdqekDkVLlryY~Sq~ps~--etgdgvdg~~LmVnlSP~K--Df~ 84 (161)
T 2kll_A 20 YNDQSITFALEDESYEIYVED---------LK--KDEKKDKVLLSYYESQHPSN--ESGDGVDGKMLMVTLSPTK--DFW 84 (161)
T ss_dssp TTTEEEEEEECSSCEEEEEEE---------CC--SCCCCCCEEEEEEECCCCTT--TSCCCCSCCCEEEEEESSS--SEE
T ss_pred ccCceEEEEEeCCcEEEEehh---------hc--cchhcceEEEEeccCCCCcc--ccCCCccccEEEEEccccc--cee
Confidence 566666665555443333322 11 44445567788654433221 222235777777 66655 444
Q ss_pred EEeecCCcceEEecCCCCCCcceEEEeeccCCCCCeEEEeecCCcceEEEEe
Q 005721 558 VIQHETDDELVVTDSFIAQGSSVFHLVAGLDGGDRTVSLESETYKGCFVYTA 609 (681)
Q Consensus 558 v~~~~~~~~l~v~~~~~~~~~s~f~~vpgl~g~~~~vsle~~~~pg~~~~~~ 609 (681)
+--...+-++.+..---..++..|.+.--.. ...||||-.+.||.|+-+.
T Consensus 85 LHANnkehSVELqkce~~lPdQaFFvlH~~s--s~cVSFEck~~PGvfiGVK 134 (161)
T 2kll_A 85 LHANNKEHSVELHKCEKPLPDQAFFVLHNMH--SNCVSFECKTDPGVFIGVK 134 (161)
T ss_dssp EEEETTTTEEEEEECCSSCCTTTCEEEEECS--SSCEEEEESSSTTEEEEES
T ss_pred EecCCccceeEeecccCCCCcceEEEEecCC--CceEEEEecCCCceEEEec
Confidence 4444444455555445567888888875443 4799999999999999765
No 57
>2ila_A Interleukin-1 alpha; cytokine; 2.30A {Homo sapiens} SCOP: b.42.1.2 PDB: 2kki_A 2l5x_A
Probab=38.86 E-value=17 Score=34.08 Aligned_cols=26 Identities=15% Similarity=0.016 Sum_probs=21.7
Q ss_pred CeEEEeecCCcceEEEEeeccCCCCcEEEE
Q 005721 592 RTVSLESETYKGCFVYTAVNLQSSESTKLG 621 (681)
Q Consensus 592 ~~vsle~~~~pg~~~~~~~~~~~g~~~~~~ 621 (681)
.+.+|||+.+||||+-.. .++.|.+.
T Consensus 114 ~~~~FESaa~PgWFI~Ts----~~qPV~Lt 139 (155)
T 2ila_A 114 TKNYFTSVAHPNLFIATK----QDYWVCLA 139 (155)
T ss_pred CeeEEEeccCCCcEEEcC----CCCCeEee
Confidence 589999999999999874 26677776
No 58
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A*
Probab=36.49 E-value=81 Score=35.23 Aligned_cols=75 Identities=15% Similarity=0.059 Sum_probs=50.6
Q ss_pred HHHHHHHhCC------hHHHHHHHHHHHHhhccceeeecCCCCCCCCCCCcccccCCCCCcccchhhHHHHHHHHHHhcc
Q 005721 168 SQMRYEVTGD------QLHKTISMFFMDIVNSSHTYATGGTSVGEFWSDPKRLASNLDSNTEESCTTYNMLKVSRHLFRW 241 (681)
Q Consensus 168 ~a~~Y~~TGd------~~y~~aa~~f~d~v~~~h~y~tGG~s~~E~f~~p~~l~~~l~~~~~EtCas~nmlkl~~~Lf~~ 241 (681)
+|..+++-++ ++++++|+..|+...++..-. +..+.. .....|..+.-.=+++.-+-.|++.
T Consensus 252 lA~as~vf~~~D~~yA~~~L~~A~~~~~fa~~~~~~~---------~~~~~~---~~~~~Y~~~~~~Del~wAA~~Ly~a 319 (537)
T 3gzk_A 252 MAHAALVYRPFDPALSSCCADAARRAYAWLGAHEMQP---------FHNPDG---ILTGEYGDAELRDELLWASCALLRM 319 (537)
T ss_dssp HHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHTSCCCC---------CCCCTT---CCSCCCCCSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHhhcccCHHHHHHHHHHHHHHHHHHHhccccc---------ccCCcc---cccCCcCCCccchHHHHHHHHHHHH
Confidence 5556777776 788999999999987654311 111100 0112244444555677778889999
Q ss_pred cCCchhHHHHHHH
Q 005721 242 TKEIAYADYYERS 254 (681)
Q Consensus 242 tgd~~YaD~~Era 254 (681)
|||..|.++++..
T Consensus 320 Tgd~~Yl~~a~~~ 332 (537)
T 3gzk_A 320 TGDSAWARVCEPL 332 (537)
T ss_dssp HCCGGGHHHHHHH
T ss_pred hCCHHHHHHHHHh
Confidence 9999999999874
No 59
>2v8i_A Pectate lyase; periplasm, beta-elimination, pectin degradation; 1.50A {Yersinia enterocolitica} PDB: 2v8k_A* 2v8j_A
Probab=35.76 E-value=46 Score=36.50 Aligned_cols=86 Identities=13% Similarity=0.057 Sum_probs=55.8
Q ss_pred HHHHHHHHhcCCHHHHHHHhhccccccchhhh--hcCCCCCCCcccCccc-cchHHHHHHHHhCChHHHHHHHHHHHHhh
Q 005721 116 DVLYKLFCITQDPKHLMLAHLFDKPCFLGLLA--LQADDISGFHSNTHIP-IVIGSQMRYEVTGDQLHKTISMFFMDIVN 192 (681)
Q Consensus 116 e~L~~LY~~TGd~~yL~lA~~f~~~~~~~~l~--~~~D~l~g~HanthiP-~~~G~a~~Y~~TGd~~y~~aa~~f~d~v~ 192 (681)
.++++-|++++|+...+++..+.+..-++.+. .+.+..-.++.-..-| .+.+...+|+.|+++.|++.|+..=+++.
T Consensus 380 l~~vra~~~s~D~~Lw~~~~~ma~~~~lgdi~~~~~~~~~~~~~~~~~sp~lL~allEL~~atq~~~~l~lA~~~g~nl~ 459 (543)
T 2v8i_A 380 ISYARAYAIDNDPLLWKVARGIANDQGLGDIGTAPGKEVKVNMDTTNSDPYALFALLDLYHASQVADYRKLAEKIGDNII 459 (543)
T ss_dssp HHHHHHHHHSCCHHHHHHHHHHHHHTTCEECTTBTTBSCEECTTCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHhhCCccccCCCcCcccccccCCCCcCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 78999999999999999988765432222221 1111111111112223 34778889999999999999988888887
Q ss_pred ccceeeecCC
Q 005721 193 SSHTYATGGT 202 (681)
Q Consensus 193 ~~h~y~tGG~ 202 (681)
+ +.|..|=+
T Consensus 460 ~-~~~~~G~F 468 (543)
T 2v8i_A 460 K-IRYIDGFF 468 (543)
T ss_dssp H-HHEETTEE
T ss_pred H-HhhcCcee
Confidence 5 55555433
No 60
>1ia6_A Cellulase CEL9M; cellullase, alpha barrel, hydrolase; 1.80A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1ia7_A*
Probab=35.56 E-value=52 Score=35.80 Aligned_cols=113 Identities=11% Similarity=0.139 Sum_probs=54.3
Q ss_pred CcccCCchHHHHHHHHHHHHHHHhhhhCCCc-eeeccCCchhhhhhccCCCcccccchHHHHHHHHHHHHHcCCHHHHHH
Q 005721 1 MWASTHNESLKEKMSAVVSALSACQKEIGSG-YLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQYTYADNAEALRM 79 (681)
Q Consensus 1 mya~t~D~~L~~k~~~~V~~l~~~Q~~~~dG-Yl~~~~~~~~~~~~~~~~~W~pyy~~HkI~aGLld~y~~tG~~~aL~v 79 (681)
||..|+|+.+++.+........++|. .+. +. ....|.-...+..+ ||. +.+++++..+.
T Consensus 220 Ly~aTgd~~Yl~~a~~~~~~~~~~~~--~~~~~~-------------~~~~Wd~~~~g~~~---lla--~~~~~~~~~~~ 279 (441)
T 1ia6_A 220 LYTATNDSTYITDAEQFITLGNTMNE--NKMQDK-------------WTMCWDDMYVPAAL---RLA--QITGKQIYKDA 279 (441)
T ss_dssp HHHHHCCTHHHHHHHHHTTC--------CGGGCS-------------SCSSSSCCHHHHHH---HHH--HHHCCHHHHHH
T ss_pred HHHHhCCHHHHHHHHHHHhhhhhccc--ccccCC-------------CcCCccchHHHHHH---HHH--hccCcHHHHHH
Confidence 46778888888888776544333333 110 00 01234433333222 222 24678888888
Q ss_pred HHHHHHHHHHHhhhhhhccccccccccccccccchHHHH--HHHHHhcCCHHHHHHHhh
Q 005721 80 TTWMVEYFYNRVQNVIKKYSIERHWQTLNEEAGGMNDVL--YKLFCITQDPKHLMLAHL 136 (681)
Q Consensus 80 a~~~ad~~~~~~~~~~~~~~~~~~~~~l~~E~GGmne~L--~~LY~~TGd~~yL~lA~~ 136 (681)
+.+.++++...+..-..++.....|....-- +|.++ .--++++++++|+++|+.
T Consensus 280 ~~~~~~~~~~~~~~tp~Gl~~~~~WGs~~~~---~~~a~l~~~~~~~~~~~~y~~~A~~ 335 (441)
T 1ia6_A 280 IEFNFNYWKTQVTTTPGGLKWLSNWGVLRYA---AAESMVMLVYCKQNPDQSLLDLAKK 335 (441)
T ss_dssp HHHHHHHHHHTSCBCTTSCBCCCSTTHHHHH---HHHHHHHHHHHHHSCCHHHHHHHHH
T ss_pred HHHHHHHHHhhcccCCCCceecCCcchHHHH---HHHHHHHHHHHhhcCHHHHHHHHHH
Confidence 8888877753322110111111123221100 23222 223678999999999975
No 61
>2nvh_A IL-1 beta, interleukin-1 beta, catabolin; water, hydration, protein folding, cytokine; 1.53A {Homo sapiens} SCOP: b.42.1.2 PDB: 1iob_A 1itb_A 2i1b_A 2kh2_A 1i1b_A 4i1b_A 5i1b_A 6i1b_A 7i1b_A 9ilb_A 4dep_A* 3o4o_A* 1twm_A 1twe_A 1s0l_A 1too_A 1t4q_A 41bi_A 21bi_A 1hib_A ...
Probab=34.77 E-value=17 Score=33.95 Aligned_cols=28 Identities=18% Similarity=0.347 Sum_probs=22.2
Q ss_pred CeEEEeecCCcceEEEEeeccCCCCcEEEE
Q 005721 592 RTVSLESETYKGCFVYTAVNLQSSESTKLG 621 (681)
Q Consensus 592 ~~vsle~~~~pg~~~~~~~~~~~g~~~~~~ 621 (681)
.+.+|||+.+||||+-.. ...++-|.+.
T Consensus 108 ~~~~fESaa~PgWFI~Ts--~~~~qPV~Lt 135 (153)
T 2nvh_A 108 NKLEFESAQFPNWYISTS--QAENMPVFLG 135 (153)
T ss_dssp TEEEEEESSSTTCEEEBC--SSTTEECEEE
T ss_pred CeeEEEeccCCCcEEecC--CCCCeEEEee
Confidence 699999999999999863 2246677776
No 62
>2wry_A IL-1 beta, interleukin-1BETA; immune system, pyrogen, mitogen, inflammatory response; 1.58A {Gallus gallus} PDB: 3nj5_A
Probab=34.14 E-value=28 Score=32.80 Aligned_cols=36 Identities=25% Similarity=0.467 Sum_probs=26.1
Q ss_pred EEEeeccCCCCCeEEEeecCCcceEEEEeeccCCCCcEEEE
Q 005721 581 FHLVAGLDGGDRTVSLESETYKGCFVYTAVNLQSSESTKLG 621 (681)
Q Consensus 581 f~~vpgl~g~~~~vsle~~~~pg~~~~~~~~~~~g~~~~~~ 621 (681)
|+-..|. ..+.+|||+.+||||+-.. ...++-|.|.
T Consensus 111 yr~~~G~---~~~~tfESaa~PgWFI~Ts--~~~~qPV~Lt 146 (162)
T 2wry_A 111 YRLDSPT---EGTTRFESAAFPGWFICTS--LQPRQPVGIT 146 (162)
T ss_dssp EEEEETT---TTEEEEEESSSTTCEEEBC--SSSSEECEEE
T ss_pred EEecCCC---CCceEEEeccCCCcEEEcC--CCCCeEEEee
Confidence 4555664 3689999999999999863 2246677776
No 63
>1md6_A Interleukin 1 family, member 5 (delta); beta triple, alpha helix, immune system; 1.60A {Mus musculus} SCOP: b.42.1.2
Probab=34.12 E-value=17 Score=34.11 Aligned_cols=27 Identities=33% Similarity=0.562 Sum_probs=21.5
Q ss_pred eEEEeecCCcceEEEEeeccCCCCcEEEE
Q 005721 593 TVSLESETYKGCFVYTAVNLQSSESTKLG 621 (681)
Q Consensus 593 ~vsle~~~~pg~~~~~~~~~~~g~~~~~~ 621 (681)
+.+|||+.+||||+-.. ...++-|.+.
T Consensus 107 ~~tfESaa~PgWFI~Ts--~~~~qPV~Lt 133 (154)
T 1md6_A 107 TSSFESAAYPGWFLCTS--PEADQPVRLT 133 (154)
T ss_dssp CEEEEESSSTTCEEEBC--SSSSEECEEE
T ss_pred eEEEEeccCCCcEEecC--CCCCeEEEee
Confidence 89999999999999863 2246677776
No 64
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A
Probab=32.95 E-value=64 Score=34.98 Aligned_cols=67 Identities=13% Similarity=0.121 Sum_probs=36.8
Q ss_pred HHcCCHHHHHHHHHHHHHHHHHhhhhhhccccccccccccccccchHHHHHHHHHh-cCCHHHHHHHhh
Q 005721 69 TYADNAEALRMTTWMVEYFYNRVQNVIKKYSIERHWQTLNEEAGGMNDVLYKLFCI-TQDPKHLMLAHL 136 (681)
Q Consensus 69 ~~tG~~~aL~va~~~ad~~~~~~~~~~~~~~~~~~~~~l~~E~GGmne~L~~LY~~-TGd~~yL~lA~~ 136 (681)
+.++.++..+.+..+++++.........++.....|....-- ..+-..+...++. +++.+|+++|+.
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~tp~Gl~~~~~WGs~~~~-~n~a~l~~~~~~~~~~~~~y~~~A~~ 333 (433)
T 1ks8_A 266 KLTNKQAYKDTVQSYVNYLINNQQKTPKGLLYIDMWGTLRHA-ANAAFIMLEAAELGLSASSYRQFAQT 333 (433)
T ss_dssp HHHCCHHHHHHHHHHHHHHHHTSCBCTTSCBCCCSTTHHHHH-HHHHHHHHHHHHTTSSHHHHHHHHHH
T ss_pred hccChHHHHHHHHHHHHHHHhcCCcCCCCceeecCCchhHHH-HHHHHHHHHHHhcCCCHHHHHHHHHH
Confidence 446788888889998888875432211111111223221100 0111344445666 899999999975
No 65
>2w47_A Lipolytic enzyme, G-D-S-L; hydrolase; HET: UNF; 1.40A {Clostridium thermocellum} PDB: 2w1w_A
Probab=32.64 E-value=1.4e+02 Score=26.81 Aligned_cols=37 Identities=19% Similarity=0.199 Sum_probs=23.6
Q ss_pred EEEEEEEeCCCCeeeEEEEeccC-CccCCCcEEEECCee
Q 005721 360 RVTLTFSSKGSGLTTSLNLRIPT-WTSSNGAKATLNGQD 397 (681)
Q Consensus 360 ~V~itv~~~~~~~~ftL~LRIP~-Wa~~~~~~v~VNG~~ 397 (681)
.|+++|+.. ++...+|.+|.=. -.......|.|||+.
T Consensus 41 ~v~~~V~v~-~aG~Y~l~~ryan~~~~~~~~~l~VNG~~ 78 (144)
T 2w47_A 41 YIEWNVNAP-SSGSYALIFRYANGTTANRPMRITVNGNI 78 (144)
T ss_dssp EEEEEEEES-SSEEEEEEEEEECCSSSCCCEEEEETTEE
T ss_pred EEEEEEECC-CCcEEEEEEEEECCCCCCeEEEEEECCeE
Confidence 567777653 5677778888622 111125789999986
No 66
>1ilt_A Interleukin-1 receptor antagonist; cytokine; 2.00A {Homo sapiens} SCOP: b.42.1.2 PDB: 1ilr_1 1ira_X* 2irt_A 1irp_A
Probab=30.21 E-value=19 Score=33.59 Aligned_cols=27 Identities=33% Similarity=0.519 Sum_probs=21.2
Q ss_pred eEEEeecCCcceEEEEeeccCCCCcEEEE
Q 005721 593 TVSLESETYKGCFVYTAVNLQSSESTKLG 621 (681)
Q Consensus 593 ~vsle~~~~pg~~~~~~~~~~~g~~~~~~ 621 (681)
+.+|||+.+||||+-.. ...++-|.+.
T Consensus 108 ~~~fESaa~PgWFI~Ts--~~~~~PV~Lt 134 (152)
T 1ilt_A 108 TTSFESAACPGWFLCTA--MEADQPVSLT 134 (152)
T ss_pred ceEEEeccCCCcEEEcC--CcCCeEEEee
Confidence 89999999999999863 2235667776
No 67
>2gjh_A Designed protein; obligate symmetric HOMO-dimer, de novo protein; NMR {}
Probab=26.79 E-value=16 Score=27.56 Aligned_cols=19 Identities=21% Similarity=0.548 Sum_probs=15.5
Q ss_pred CCCEEEEEeecCCCCEEEEE
Q 005721 403 PGNFLSVTKTWSSDDKLTIQ 422 (681)
Q Consensus 403 ~ggy~~I~R~W~~GD~V~L~ 422 (681)
+-||-.|..+| +||+|+++
T Consensus 29 elgyndinvtw-dgdtvtve 47 (62)
T 2gjh_A 29 ELGYNDINVTW-DGDTVTVE 47 (62)
T ss_dssp HTTCCSCEEEE-CSSCEEEE
T ss_pred HhCcccceeEE-cCCEEEEE
Confidence 45788899999 68999876
No 68
>1dm9_A Hypothetical 15.5 KD protein in MRCA-PCKA intergenic region; heat shock proteins, protein-RNA interactions, ribosome, structural genomics; 2.00A {Escherichia coli} SCOP: d.66.1.3 PDB: 3bbu_A
Probab=26.48 E-value=78 Score=28.54 Aligned_cols=34 Identities=24% Similarity=0.175 Sum_probs=23.5
Q ss_pred EEEECCeecCCCCCCCEEEEEeecCCCCEEEEEecceeEEEec
Q 005721 390 KATLNGQDLPLPSPGNFLSVTKTWSSDDKLTIQLPLTLRTEAI 432 (681)
Q Consensus 390 ~v~VNG~~~~~~~~ggy~~I~R~W~~GD~V~L~LPm~lr~~~~ 432 (681)
.|+|||+.+.. + +. -+.||+|+|.++-..+...+
T Consensus 35 ~V~VNG~~vk~---s-~~-----V~~GD~I~I~~~~~~~~~~v 68 (133)
T 1dm9_A 35 KVHYNGQRSKP---S-KI-----VELNATLTLRQGNDERTVIV 68 (133)
T ss_dssp CEEETTEECCT---T-CB-----CCTTCEEEEEETTEEEEEEE
T ss_pred cEEECCEEcCC---C-CE-----eCCCCEEEEEeCCceeeEEE
Confidence 68999997532 1 21 26799999999876655443
No 69
>3ltq_A Interleukin-1 beta; lanthanide binding TAG, LBT, terbium, IL1B, cytokine, inflam response, mitogen, pyrogen, secreted; 2.10A {Homo sapiens} SCOP: b.42.1.2
Probab=24.11 E-value=33 Score=32.63 Aligned_cols=28 Identities=18% Similarity=0.347 Sum_probs=21.5
Q ss_pred CeEEEeecCCcceEEEEeeccCCCCcEEEE
Q 005721 592 RTVSLESETYKGCFVYTAVNLQSSESTKLG 621 (681)
Q Consensus 592 ~~vsle~~~~pg~~~~~~~~~~~g~~~~~~ 621 (681)
.+.+|||+.+||||+-.. ...++.|.|.
T Consensus 126 s~stFESaa~PGWFI~Ts--~~~~qPV~Lt 153 (171)
T 3ltq_A 126 NKLEFESAQFPNWYISTS--QAENMPVFLG 153 (171)
T ss_dssp TEEEEEESSSTTCEEEBC--SSTTEECEEE
T ss_pred CceEEEecCCCCCEEeec--CCCCeeEEee
Confidence 478999999999999853 2245667776
No 70
>1jlx_A Agglutinin, amaranthin, ACA; complex (lectin/saccharide), T-disaccharide homodimer, bivalent, lectin; HET: GAL A2G; 2.20A {Amaranthus caudatus} SCOP: b.42.3.1 b.42.3.1 PDB: 1jly_A
Probab=23.56 E-value=1.3e+02 Score=30.98 Aligned_cols=33 Identities=15% Similarity=0.249 Sum_probs=28.3
Q ss_pred CCCcceEEEeecc-CCCCCeEEEeecCCcceEEEEe
Q 005721 575 AQGSSVFHLVAGL-DGGDRTVSLESETYKGCFVYTA 609 (681)
Q Consensus 575 ~~~~s~f~~vpgl-~g~~~~vsle~~~~pg~~~~~~ 609 (681)
+.+.++|++++ + +|.+|+|+|.+ -++|-||+.-
T Consensus 91 ~~~ctlFkp~~-v~~~~~~~~~f~~-vq~g~~~~~~ 124 (303)
T 1jlx_A 91 NWACTLFKPLY-VEEGNMKKVRLLH-VQLGHYTQNY 124 (303)
T ss_dssp STTCCCEEEEE-SSTTCSSEEEEEE-TTTTEECEEE
T ss_pred cccccceEEEE-eccCCCceEEEEE-EecCceEEee
Confidence 45689999998 7 78899999999 4999999853
No 71
>3llp_A Fascin; beta-trefoil, actin bundling protein, cancer, metastasis, CE migration, acetylation, actin-binding, cytoplasm, phosphopr protein binding; HET: EPE; 1.80A {Homo sapiens} PDB: 1dfc_A* 3lna_A* 3o8k_A* 3p53_A* 4gov_A 4goy_A 4gp3_A 4gp0_A*
Probab=22.95 E-value=2.3e+02 Score=31.26 Aligned_cols=52 Identities=17% Similarity=0.135 Sum_probs=37.2
Q ss_pred CCCCceEEeecCCcceEEecCCCCCCcceEEEeeccCCCCCeEEEeecCCcceEEEEe
Q 005721 552 DSPGMLVIQHETDDELVVTDSFIAQGSSVFHLVAGLDGGDRTVSLESETYKGCFVYTA 609 (681)
Q Consensus 552 d~Pg~~v~~~~~~~~l~v~~~~~~~~~s~f~~vpgl~g~~~~vsle~~~~pg~~~~~~ 609 (681)
|.-|.|+.-.+....|.+..+..-+.+.+|.++- ..+.|+|++. .|+||.+.
T Consensus 225 s~~GkYL~~~g~~g~L~~~~~~~~g~~E~F~L~~----~~~qVaL~s~--ngkyVsa~ 276 (493)
T 3llp_A 225 DCEGRYLAPSGPSGTLKAGKATKVGKDELFALEQ----SCAQVVLQAA--NERNVSTR 276 (493)
T ss_dssp CTTSCBEEEETTTTEEEECC---CCGGGCEEEEE----CCCEEEEECT--TSCEEECC
T ss_pred eCCCCEEeEECCCCeEEeccCCCCCCceEEEEEe----CCCEEEEEec--CCcEEEec
Confidence 3567778777765556655555667789999996 3689999987 89999864
No 72
>2k6p_A Uncharacterized protein HP_1423; alpha-L motif, RNA-binding, unknown function; NMR {Helicobacter pylori}
Probab=21.50 E-value=72 Score=26.42 Aligned_cols=33 Identities=12% Similarity=0.085 Sum_probs=22.3
Q ss_pred EEEECCeecCCCCCCCEEEEEeecCCCCEEEEEecceeEEEe
Q 005721 390 KATLNGQDLPLPSPGNFLSVTKTWSSDDKLTIQLPLTLRTEA 431 (681)
Q Consensus 390 ~v~VNG~~~~~~~~ggy~~I~R~W~~GD~V~L~LPm~lr~~~ 431 (681)
.|+|||+.+. + ++. -+.||+|+|.+|-+.....
T Consensus 27 ~V~VNg~~~~---~-~~~-----v~~gd~I~v~~~~~~~~~~ 59 (92)
T 2k6p_A 27 AVWLNGSCAK---A-SKE-----VKAGDTISLHYLKGIEEYT 59 (92)
T ss_dssp CCEETTEECC---T-TCB-----CCTTCEEEECCSSCCEEEE
T ss_pred cEEECCEEcC---C-CCC-----cCCCCEEEEEeCCceEEEE
Confidence 5899999753 2 221 2579999999877655543
No 73
>2vzp_A Aocbm35, EXO-beta-D-glucosaminidase; family 35, CSXA, glucuronic acid, hydrolase; 1.05A {Amycolatopsis orientalis} PDB: 2vzq_A* 2vzr_A*
Probab=20.73 E-value=3.7e+02 Score=23.11 Aligned_cols=38 Identities=24% Similarity=0.150 Sum_probs=23.1
Q ss_pred EEEEEEEeCCCCeeeEEEEeccC-CccCCCcEEEECCeec
Q 005721 360 RVTLTFSSKGSGLTTSLNLRIPT-WTSSNGAKATLNGQDL 398 (681)
Q Consensus 360 ~V~itv~~~~~~~~ftL~LRIP~-Wa~~~~~~v~VNG~~~ 398 (681)
.|+++|+.. ++...+|.+|.=. ........|.|||+.+
T Consensus 40 ~v~~~V~v~-~aG~Y~l~~rya~~~~~~~~~~l~VnG~~~ 78 (127)
T 2vzp_A 40 SVEWTVTVP-SAGTYDVVVRYANGTTTSRPLDFSVNGSIS 78 (127)
T ss_dssp EEEEEEEES-SSEEEEEEEEEECCSSSCCCEEEEETTEEE
T ss_pred EEEEEEEcC-CCCEEEEEEEEEcCCCCCeEEEEEECCEEe
Confidence 466666652 4566677777632 1111257899999864
Done!