BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005722
(681 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|183239026|gb|ACC60971.1| phytochrome C [Vitis riparia]
Length = 1123
Score = 1192 bits (3085), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 565/683 (82%), Positives = 623/683 (91%), Gaps = 4/683 (0%)
Query: 1 MSSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSV--NISSST 56
MSSKSTNKTN SRSSSARSK ARV AQT IDA+L +F+ES+ FDYS S+ NISSST
Sbjct: 1 MSSKSTNKTNCSRSSSARSKHGARVVAQTPIDAQLHVNFEESERHFDYSASIDFNISSST 60
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VPSSTVSAYLQ++QRG LIQPFGCMIAVDEQN TVL YSENAPEMLDLAPHAVP+IEQ
Sbjct: 61 GDVPSSTVSAYLQKMQRGNLIQPFGCMIAVDEQNLTVLAYSENAPEMLDLAPHAVPSIEQ 120
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+AL +G DVRTLF SSGAAALQKAANFGEVNLLNPIL+HC+ SGKPFYAILHRIDVGL+
Sbjct: 121 QEALAIGTDVRTLFRSSGAAALQKAANFGEVNLLNPILVHCRNSGKPFYAILHRIDVGLI 180
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEPVNP DVP+TAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLV E S+LTGYDRV
Sbjct: 181 IDLEPVNPADVPITAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVKEASELTGYDRV 240
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEV+AECR+PDLEPYLG HYPATDIPQASRFL MKNKVRMICDCLAPPVK
Sbjct: 241 MVYKFHEDEHGEVIAECRKPDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCLAPPVK 300
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQ+K+L QPLSLCGSTLR+PHGCHA+YM NMGS+ASLVMSVTINE +D+ +++Q++GRK
Sbjct: 301 VIQNKRLAQPLSLCGSTLRSPHGCHAQYMANMGSVASLVMSVTINEEDDDTESEQQKGRK 360
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCH+TSPRFVPFPLRYACEFL+QVFGVQ++KE+EL+AQ++EKHIL+TQTVLCDML
Sbjct: 361 LWGLVVCHNTSPRFVPFPLRYACEFLVQVFGVQISKEMELAAQMKEKHILQTQTVLCDML 420
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PVGIVTQ+PNVMDLV+CDGAALYY+ K WLLGVTPTE QI+DI EWLLEYH GSTG
Sbjct: 421 LRDAPVGIVTQSPNVMDLVRCDGAALYYQKKFWLLGVTPTEAQIRDIVEWLLEYHSGSTG 480
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGYP AL LGDAVCGIAAVKI S DFLFWFRSHTAKEIKWGGAKHD KD
Sbjct: 481 LSTDSLMEAGYPAALVLGDAVCGIAAVKINSNDFLFWFRSHTAKEIKWGGAKHDPDDKDD 540
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
GRKMHPRSSFKAFLEVVK+RSLPWEDVEMDAIHSLQLILRGSLQD+ A+DSKMIVNVPSV
Sbjct: 541 GRKMHPRSSFKAFLEVVKRRSLPWEDVEMDAIHSLQLILRGSLQDKSADDSKMIVNVPSV 600
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D I+ D+LRI+TNEMVRLIETA+VPILAVDA+G +NGWN+KAAELTGL + QAIG L
Sbjct: 601 DASIKMADDLRIVTNEMVRLIETASVPILAVDAAGCINGWNNKAAELTGLIMQQAIGMPL 660
Query: 657 VDLVAGDSVDVVKNMLSSAFLAI 679
+DLV DS D+VK MLS A I
Sbjct: 661 IDLVENDSADMVKKMLSMALQGI 683
>gi|225447543|ref|XP_002268724.1| PREDICTED: phytochrome C [Vitis vinifera]
Length = 1118
Score = 1170 bits (3028), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 566/683 (82%), Positives = 623/683 (91%), Gaps = 4/683 (0%)
Query: 1 MSSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSV--NISSST 56
MSSKSTNKTN SRSSSARSK ARV AQT IDA+L +F+ES+ FDYS SV NISSST
Sbjct: 1 MSSKSTNKTNCSRSSSARSKHGARVVAQTPIDAQLHVNFEESERHFDYSASVDFNISSST 60
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
S+VPSSTVSAYLQ++QRG LIQPFGCMIAVDEQN TVL YSENAPEMLDLAPHAVP+IEQ
Sbjct: 61 SDVPSSTVSAYLQKMQRGNLIQPFGCMIAVDEQNLTVLAYSENAPEMLDLAPHAVPSIEQ 120
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+AL +G DVRTLF SSGAAALQKAANFGEVNLLNPIL+HC+ SGKPFYAILHRIDVGL+
Sbjct: 121 QEALAIGTDVRTLFRSSGAAALQKAANFGEVNLLNPILVHCRNSGKPFYAILHRIDVGLI 180
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLV E S+LTGYDRV
Sbjct: 181 IDLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVKEASELTGYDRV 240
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEV+AECR+PDLEPYLG HYPATDIPQASRFL MKNKVRMICDCLAPPVK
Sbjct: 241 MVYKFHEDEHGEVIAECRKPDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCLAPPVK 300
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQ+K+L QPLSLCGSTLR+PHGCHA+YM NMGS+ASLVMSVTINE +D+ +++Q++GRK
Sbjct: 301 VIQNKRLAQPLSLCGSTLRSPHGCHAQYMANMGSVASLVMSVTINEEDDDTESEQQKGRK 360
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCH+TSPRFVPFPLRYACEFL+QVFGVQ++KE+EL+AQ++EKHIL+TQTVLCDML
Sbjct: 361 LWGLVVCHNTSPRFVPFPLRYACEFLVQVFGVQISKEMELAAQMKEKHILQTQTVLCDML 420
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PVGIVTQ+PNVMDLV+CDGAALYY+ K WLLGVTPTE QI+DI EWLLEYH GSTG
Sbjct: 421 LRDAPVGIVTQSPNVMDLVRCDGAALYYQKKFWLLGVTPTEAQIRDIVEWLLEYHSGSTG 480
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGYP A LGDAVCGIAAVKI S DFLFWFRSHTAKEIKWGGAKHD KD
Sbjct: 481 LSTDSLMEAGYPAASVLGDAVCGIAAVKINSNDFLFWFRSHTAKEIKWGGAKHDPDDKDD 540
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
GRKMHPRSSFKAFLEVVK+RSLPWEDVEMDAIHSLQLILRGSLQD+ A+DSKMIVNVPSV
Sbjct: 541 GRKMHPRSSFKAFLEVVKRRSLPWEDVEMDAIHSLQLILRGSLQDKSADDSKMIVNVPSV 600
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D I+ D+LRI+TNEMVRLIETA+VPILAVDA+G +NGWN+KAAELTGL + QAIG L
Sbjct: 601 DASIKMADDLRIVTNEMVRLIETASVPILAVDAAGCINGWNNKAAELTGLIMQQAIGMPL 660
Query: 657 VDLVAGDSVDVVKNMLSSAFLAI 679
++LV DS D+VK MLS A I
Sbjct: 661 INLVENDSADMVKKMLSMALQGI 683
>gi|183239018|gb|ACC60967.1| phytochrome C [Vitis vinifera]
Length = 1118
Score = 1167 bits (3020), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 565/683 (82%), Positives = 622/683 (91%), Gaps = 4/683 (0%)
Query: 1 MSSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSV--NISSST 56
MSSKSTNKTN SRSSSARSK ARV AQT IDA+L +F+ES+ FDYS SV NISSST
Sbjct: 1 MSSKSTNKTNCSRSSSARSKHGARVVAQTPIDAQLHVNFEESERHFDYSASVDFNISSST 60
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
S+VPSSTVSAYLQ++QRG LIQPFGCMIAVDEQN TVL YSENAPEMLDLAPHAVP+IEQ
Sbjct: 61 SDVPSSTVSAYLQKMQRGNLIQPFGCMIAVDEQNLTVLAYSENAPEMLDLAPHAVPSIEQ 120
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+AL +G DVRTLF SSGAAALQKAANFGEVNLLNPIL+HC+ SGKPFYAILHRIDVGL+
Sbjct: 121 QEALAIGTDVRTLFRSSGAAALQKAANFGEVNLLNPILVHCRNSGKPFYAILHRIDVGLI 180
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLV E S+LTGYDRV
Sbjct: 181 IDLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVKEASELTGYDRV 240
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEV+AECR+PDLEPYLG HYPATDIPQASRFL MKNKVRMICDCLAPPVK
Sbjct: 241 MVYKFHEDEHGEVIAECRKPDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCLAPPVK 300
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQ+K+L QPLSLCGSTLR+PHGCHA+YM NMGS+ASLVMSVTINE +D+ ++ Q++GRK
Sbjct: 301 VIQNKRLAQPLSLCGSTLRSPHGCHAQYMANMGSVASLVMSVTINEEDDDTESKQQKGRK 360
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCH+TSPRFVPFPLRYACEFL+QVFGVQ++KE+EL+AQ++EKHIL+TQTVLCDML
Sbjct: 361 LWGLVVCHNTSPRFVPFPLRYACEFLVQVFGVQISKEMELAAQMKEKHILQTQTVLCDML 420
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PVGIVTQ+PNVMDLV+CDGAALYY+ K WLLGVTPTE QI+DI EWLLE+H GSTG
Sbjct: 421 LRDAPVGIVTQSPNVMDLVRCDGAALYYQKKFWLLGVTPTEAQIRDIVEWLLEHHSGSTG 480
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGYP A LGDAVCGIAAVKI S DFLFWFRSHTAKEIKWGGAKHD KD
Sbjct: 481 LSTDSLMEAGYPAASVLGDAVCGIAAVKINSNDFLFWFRSHTAKEIKWGGAKHDPDDKDD 540
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
GRKMHPRSSFKAFLEVVK+RSLPWEDVEMDAIHSLQLILRGSLQD+ A+DSKMIVNVPSV
Sbjct: 541 GRKMHPRSSFKAFLEVVKRRSLPWEDVEMDAIHSLQLILRGSLQDKSADDSKMIVNVPSV 600
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D I+ D+LRI+TNEMVRLIETA+VPILAVDA+G +NGWN+KAAELTGL + QAIG L
Sbjct: 601 DASIKMADDLRIVTNEMVRLIETASVPILAVDAAGCINGWNNKAAELTGLIMQQAIGMPL 660
Query: 657 VDLVAGDSVDVVKNMLSSAFLAI 679
++LV DS D+VK MLS A I
Sbjct: 661 INLVENDSADMVKKMLSMALQGI 683
>gi|449506938|ref|XP_004162889.1| PREDICTED: LOW QUALITY PROTEIN: phytochrome C-like [Cucumis
sativus]
Length = 1119
Score = 1124 bits (2906), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 535/683 (78%), Positives = 594/683 (86%), Gaps = 4/683 (0%)
Query: 1 MSSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSV--NISSST 56
MSS STNKT S++S RSK A V AQT IDAKL DF+ S+ FDYS SV N + ST
Sbjct: 1 MSSTSTNKTVCSKTSFDRSKHGAHVVAQTPIDAKLHVDFEGSERLFDYSASVDFNAACST 60
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
SNV +STV +YL +QRG L+QPFGCMIAVD +N +VL YSENAPEMLDLAPHAVPNIEQ
Sbjct: 61 SNVHASTVQSYLLNIQRGSLVQPFGCMIAVDGENLSVLAYSENAPEMLDLAPHAVPNIEQ 120
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ALT G DVRTLF S GAAALQKAA+F EVNLLNPIL+HC+TSGKPFYAILHR+DVGL+
Sbjct: 121 QEALTFGTDVRTLFRSPGAAALQKAADFKEVNLLNPILVHCRTSGKPFYAILHRVDVGLI 180
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEPVNP DVPVTAAGALKSYKLAAKAIS+LQ+L SGNISLLC+VLV EVSDLTGYDRV
Sbjct: 181 IDLEPVNPADVPVTAAGALKSYKLAAKAISKLQNLQSGNISLLCEVLVKEVSDLTGYDRV 240
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFH+DEHGEVVAEC R DLEPY G HYPATDIPQASRFL +KNKVRMICDCLAPPVK
Sbjct: 241 MVYKFHDDEHGEVVAECCRSDLEPYFGLHYPATDIPQASRFLFLKNKVRMICDCLAPPVK 300
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
V+QD++L QPLSLCGS LRAPHGCHARYM NMGSIASLVMS+TINE + E +NDQE+ RK
Sbjct: 301 VLQDRRLAQPLSLCGSALRAPHGCHARYMMNMGSIASLVMSITINENDSESENDQEKDRK 360
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTSPRFVPFPLRYACEFLIQVFG+Q+NKEVEL AQL+EKHILR QTVLCDML
Sbjct: 361 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGIQINKEVELQAQLKEKHILRIQTVLCDML 420
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PVGIVTQ+PN+MDLVKCDGAALY+R K W LGVTPTE QI++IA+WLL+ H GSTG
Sbjct: 421 LRDAPVGIVTQSPNIMDLVKCDGAALYFRKKFWSLGVTPTEAQIRNIADWLLKDHSGSTG 480
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL EAG+ GA ALGD +CG+AAV+ITSKDFLFWFRSH AKEI+WGGAKHD +D
Sbjct: 481 LSTDSLTEAGFYGASALGDEICGMAAVRITSKDFLFWFRSHMAKEIRWGGAKHDPSDEDD 540
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
GRKMHPRSSFKAFLEVVK+RS PWEDVEMDAIHSLQLILRGSLQDE+ E+ K+I VP V
Sbjct: 541 GRKMHPRSSFKAFLEVVKRRSQPWEDVEMDAIHSLQLILRGSLQDEIEEECKVITTVPPV 600
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D++ +++DELR+ITNEMVRLIETAAVPILAVD G +NGWNSKA ELTGL + +AIG L
Sbjct: 601 DEKTQQLDELRVITNEMVRLIETAAVPILAVDVFGKINGWNSKATELTGLAIQEAIGMPL 660
Query: 657 VDLVAGDSVDVVKNMLSSAFLAI 679
VD V DSV VVK MLS A I
Sbjct: 661 VDCVVNDSVKVVKKMLSLAIQGI 683
>gi|449453752|ref|XP_004144620.1| PREDICTED: phytochrome C-like [Cucumis sativus]
Length = 1119
Score = 1123 bits (2905), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 535/683 (78%), Positives = 594/683 (86%), Gaps = 4/683 (0%)
Query: 1 MSSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSV--NISSST 56
MSS STNKT S++S RSK A V AQT IDAKL DF+ S+ FDYS SV N + ST
Sbjct: 1 MSSTSTNKTVCSKTSFDRSKHGAHVVAQTPIDAKLHVDFEGSERLFDYSASVDFNAACST 60
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
SNV +STV +YL +QRG L+QPFGCMIAVD +N +VL YSENAPEMLDLAPHAVPNIEQ
Sbjct: 61 SNVHASTVQSYLLNIQRGSLVQPFGCMIAVDGENLSVLAYSENAPEMLDLAPHAVPNIEQ 120
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ALT G DVRTLF S GAAALQKAA+F EVNLLNPIL+HC+TSGKPFYAILHR+DVGL+
Sbjct: 121 QEALTFGTDVRTLFRSPGAAALQKAADFKEVNLLNPILVHCRTSGKPFYAILHRVDVGLI 180
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEPVNP DVPVTAAGALKSYKLAAKAIS+LQ+L SGNISLLC+VLV EVSDLTGYDRV
Sbjct: 181 IDLEPVNPADVPVTAAGALKSYKLAAKAISKLQNLQSGNISLLCEVLVKEVSDLTGYDRV 240
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFH+DEHGEVVAEC R DLEPY G HYPATDIPQASRFL +KNKVRMICDCLAPPVK
Sbjct: 241 MVYKFHDDEHGEVVAECCRSDLEPYFGLHYPATDIPQASRFLFLKNKVRMICDCLAPPVK 300
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
V+QD++L QPLSLCGS LRAPHGCHARYM NMGSIASLVMS+TINE + E +NDQE+ RK
Sbjct: 301 VLQDRRLAQPLSLCGSALRAPHGCHARYMMNMGSIASLVMSITINENDSESENDQEKDRK 360
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTSPRFVPFPLRYACEFLIQVFG+Q+NKEVEL AQL+EKHILR QTVLCDML
Sbjct: 361 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGIQINKEVELQAQLKEKHILRIQTVLCDML 420
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PVGIVTQ+PN+MDLVKCDGAALY+R K W LGVTPTE QI++IA+WLL+ H GSTG
Sbjct: 421 LRDAPVGIVTQSPNIMDLVKCDGAALYFRKKFWSLGVTPTEAQIRNIADWLLKDHSGSTG 480
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL EAG+ GA ALGD +CG+AAV+ITSKDFLFWFRSH AKEI+WGGAKHD +D
Sbjct: 481 LSTDSLTEAGFYGASALGDEICGMAAVRITSKDFLFWFRSHMAKEIRWGGAKHDPSDEDD 540
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
GRKMHPRSSFKAFLEVVK+RS PWEDVEMDAIHSLQLILRGSLQDE+ E+ K+I VP V
Sbjct: 541 GRKMHPRSSFKAFLEVVKRRSQPWEDVEMDAIHSLQLILRGSLQDEIEEECKVITTVPPV 600
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D++ +++DELR+ITNEMVRLIETAAVPILAVD G +NGWNSKA ELTGL + +AIG L
Sbjct: 601 DEKTQQLDELRVITNEMVRLIETAAVPILAVDVFGKINGWNSKATELTGLAIQEAIGMPL 660
Query: 657 VDLVAGDSVDVVKNMLSSAFLAI 679
VD V DSV VVK MLS A I
Sbjct: 661 VDCVVNDSVKVVKKMLSLAIQGI 683
>gi|6671484|gb|AAC49301.2| phytochrome F [Solanum lycopersicum]
Length = 1118
Score = 1083 bits (2800), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 524/677 (77%), Positives = 596/677 (88%), Gaps = 4/677 (0%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNISSSTSNV 59
SS +TNKTN SR SSARS+++ARV AQT +DAKL +F+ES+ FDYS+SVN+S+STSNV
Sbjct: 3 SSSTTNKTNCSRGSSARSRRSARVIAQTPVDAKLHVEFEESEQQFDYSSSVNLSNSTSNV 62
Query: 60 PSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDA 119
PSSTVS YLQ++QRG LIQPFGCMIA+D QNF V+ YSENAPEMLDL PHAVP+IEQQ+A
Sbjct: 63 PSSTVSDYLQKMQRGSLIQPFGCMIAIDAQNFAVIAYSENAPEMLDLTPHAVPSIEQQEA 122
Query: 120 LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDL 179
LT G DVR LF SSGA+AL+KA +FGE++LLNPIL+HCK SGKPFYAILHRI+VGLVIDL
Sbjct: 123 LTFGTDVRKLFRSSGASALEKAVSFGELSLLNPILVHCKNSGKPFYAILHRIEVGLVIDL 182
Query: 180 EPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVY 239
EPV+P +VPVT AGA+KSYKLAAKAI +LQSLPSG+ISLLCDVLV EVS LTGYDRVMVY
Sbjct: 183 EPVDPHEVPVTTAGAIKSYKLAAKAIRKLQSLPSGDISLLCDVLVREVSHLTGYDRVMVY 242
Query: 240 KFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQ 299
KFHEDEHGEVVAECR P+LEPYLG HYPATDIPQASRFL MKNKVRMICDCLAPP++VIQ
Sbjct: 243 KFHEDEHGEVVAECRTPELEPYLGLHYPATDIPQASRFLFMKNKVRMICDCLAPPIRVIQ 302
Query: 300 DKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWG 359
D +L Q LSL GSTLRAPHGCHA+YM NMG++AS+ MSV INE +DELD+DQ+ GRKLWG
Sbjct: 303 DPRLAQSLSLGGSTLRAPHGCHAQYMTNMGTVASMAMSVMINEQDDELDSDQQVGRKLWG 362
Query: 360 LVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD 419
LVVCHHT PRF+ FPLRYA EFL+QVF VQVNKEVE++AQL+EK IL+ QTVLCDMLLRD
Sbjct: 363 LVVCHHTCPRFLSFPLRYASEFLLQVFSVQVNKEVEMAAQLKEKQILQIQTVLCDMLLRD 422
Query: 420 SPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLST 479
+P+GIVTQ+PNVMDLVKCDGAALYYR KLWL GVTP E QI+DIAEWL E H STGL+T
Sbjct: 423 APMGIVTQSPNVMDLVKCDGAALYYRNKLWLHGVTPAESQIRDIAEWLNESHGDSTGLNT 482
Query: 480 DSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRK 539
DSL+EAG+PGA LGDAVCG+AAVKITSKDFLFWFRSHTAKEIKWGGAKH G KD GRK
Sbjct: 483 DSLMEAGFPGASVLGDAVCGMAAVKITSKDFLFWFRSHTAKEIKWGGAKHLPGDKDDGRK 542
Query: 540 MHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDR 599
MHPRSSFKAFLEVVK+RSLPWEDVEMDAIHSLQLILRGSLQDE A+ SKMIVNVP+VD
Sbjct: 543 MHPRSSFKAFLEVVKRRSLPWEDVEMDAIHSLQLILRGSLQDEAADCSKMIVNVPAVDTI 602
Query: 600 IEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDL 659
I+++D L I N+MVRL+ETA++P+LAVD SG +NGWNSK +ELTGL V+ IG LVDL
Sbjct: 603 IDRVDTLHI--NDMVRLVETASMPVLAVDTSGRINGWNSKVSELTGLPVENVIGVPLVDL 660
Query: 660 VAGDSVDVVKNMLSSAF 676
V G + + +K +LS A
Sbjct: 661 VIGGTTNTIKRVLSLAL 677
>gi|51556875|gb|AAU06208.1| phytochrome C [Triticum aestivum]
gi|51556889|gb|AAU06215.1| phytochrome C [Triticum aestivum]
Length = 1139
Score = 1046 bits (2705), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/686 (73%), Positives = 577/686 (84%), Gaps = 12/686 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNISSSTSNV 59
SS+S N+ SR SSARSK + RV AQT +DA+L +F+ S FDYS+SV+ + +
Sbjct: 3 SSRSNNRPACSRGSSARSKHSERVVAQTPVDARLHAEFEGSHRHFDYSSSVSALNRSGAS 62
Query: 60 PSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDA 119
SS VSAYLQ +QRGR IQPFGC++A+ ++F +L YSENA EMLDL PHAVP I+Q+DA
Sbjct: 63 TSSAVSAYLQNMQRGRYIQPFGCLLAIHPESFALLAYSENAAEMLDLTPHAVPTIDQRDA 122
Query: 120 LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDL 179
L +G DVRTLF S A AL KAA FGEVNLLNPIL+H +TSGKPFYAILHRIDVGLVIDL
Sbjct: 123 LAVGADVRTLFRSQSAVALHKAAVFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVIDL 182
Query: 180 EPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVY 239
EPVNP DVPVTAAGALKSYKLAAKAISRLQSLP GN+SLLCDVLV EVS+LTGYDRVM Y
Sbjct: 183 EPVNPADVPVTAAGALKSYKLAAKAISRLQSLPGGNLSLLCDVLVREVSELTGYDRVMAY 242
Query: 240 KFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQ 299
KFHEDEHGEV+AECRR DLEPYLG HYPATDIPQASRFL MKNKVRMICDC A PVK+IQ
Sbjct: 243 KFHEDEHGEVIAECRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCAASPVKLIQ 302
Query: 300 DKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDND-----QEQG 354
D L QP+SLCGST+RAPHGCHA+YM NMGSIASLVMS+TINE EDE D D Q +G
Sbjct: 303 DDNLSQPISLCGSTMRAPHGCHAQYMANMGSIASLVMSITINEDEDE-DGDTGSDQQPKG 361
Query: 355 RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCD 414
RKLWGLVVCHHTSPRFVPFPLRYACEFL+QVFG+Q+NKEVEL++Q +E+HILRTQT+LCD
Sbjct: 362 RKLWGLVVCHHTSPRFVPFPLRYACEFLLQVFGIQLNKEVELASQAKERHILRTQTLLCD 421
Query: 415 MLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGS 474
MLLRD+PVGI TQ+PNVMDLVKCDGAAL Y+ ++ +LG TP+E +IK I WLLE H GS
Sbjct: 422 MLLRDAPVGIFTQSPNVMDLVKCDGAALCYQNQIMVLGSTPSEGEIKKIVAWLLECHDGS 481
Query: 475 TGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG-G 533
TGLSTDSL+EAGYPGA ALG+ VCG+AA+KI+SK F+FWFRSHTAKEIKWGGAKH+ G
Sbjct: 482 TGLSTDSLLEAGYPGASALGEVVCGMAAIKISSKGFIFWFRSHTAKEIKWGGAKHEPGDA 541
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAED--SKMIV 591
D GR+MHPRSSF+AFLEVVK RS+PWEDVEMDAIHSLQLILRGSLQDE A D ++ IV
Sbjct: 542 DDNGRRMHPRSSFRAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANDNTARSIV 601
Query: 592 NVPSVD-DRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQ 650
PS D +I+ + EL+I+TNEMVRLIETA PILAVD GN+NGWN+K AE+TGL +
Sbjct: 602 EAPSDDIKKIQGLLELKIVTNEMVRLIETATAPILAVDIVGNINGWNNKVAEITGLPTTE 661
Query: 651 AIGTALVDLVAGDSVDVVKNMLSSAF 676
AIG LVDLV GDSV+VVK ML+SA
Sbjct: 662 AIGMLLVDLVEGDSVEVVKQMLNSAL 687
>gi|115455391|ref|NP_001051296.1| Os03g0752100 [Oryza sativa Japonica Group]
gi|122246759|sp|Q10CQ8.1|PHYC_ORYSJ RecName: Full=Phytochrome C
gi|21070927|gb|AAM34402.1|AF377947_8 phytochrome C [Oryza sativa Japonica Group]
gi|4190974|dbj|BAA74448.1| phytochrome C [Oryza sativa Japonica Group]
gi|31712054|gb|AAP68360.1| phytochrome C [Oryza sativa Japonica Group]
gi|40538982|gb|AAR87239.1| phytochrome C [Oryza sativa Japonica Group]
gi|108711120|gb|ABF98915.1| Phytochrome C, putative, expressed [Oryza sativa Japonica Group]
gi|113549767|dbj|BAF13210.1| Os03g0752100 [Oryza sativa Japonica Group]
gi|125587941|gb|EAZ28605.1| hypothetical protein OsJ_12592 [Oryza sativa Japonica Group]
Length = 1137
Score = 1043 bits (2697), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/689 (72%), Positives = 581/689 (84%), Gaps = 12/689 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNISSSTSNV 59
SS+S N+ SRSSSARSK +ARV AQT +DA+L +F+ S FDYS+SV +++ S
Sbjct: 3 SSRSNNRATCSRSSSARSKHSARVVAQTPMDAQLHAEFEGSQRHFDYSSSVG-AANRSGA 61
Query: 60 PSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDA 119
+S VSAYLQ +QRGR +QPFGC++AV + F +L YSENA EMLDL PHAVP I+Q++A
Sbjct: 62 TTSNVSAYLQNMQRGRFVQPFGCLLAVHPETFALLAYSENAAEMLDLTPHAVPTIDQREA 121
Query: 120 LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDL 179
L +G DVRTLF S ALQKAA FG+VNLLNPIL+H +TSGKPFYAI+HRIDVGLVIDL
Sbjct: 122 LAVGTDVRTLFRSHSFVALQKAATFGDVNLLNPILVHARTSGKPFYAIMHRIDVGLVIDL 181
Query: 180 EPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVY 239
EPVNP D+PVTA GA+KSYKLAA+AI+RLQSLPSGN+SLLCDVLV EVS+LTGYDRVM Y
Sbjct: 182 EPVNPVDLPVTATGAIKSYKLAARAIARLQSLPSGNLSLLCDVLVREVSELTGYDRVMAY 241
Query: 240 KFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQ 299
KFHEDEHGEV+AEC+R DLEPYLG HYPATDIPQASRFL MKNKVRMICDC A PVK+IQ
Sbjct: 242 KFHEDEHGEVIAECKRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCSATPVKIIQ 301
Query: 300 DKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTIN----EAEDELDNDQEQGR 355
D L QP+S+CGSTLRAPHGCHA+YM +MGS+ASLVMSVTIN + D + Q +GR
Sbjct: 302 DDSLTQPISICGSTLRAPHGCHAQYMASMGSVASLVMSVTINEDEDDDGDTGSDQQPKGR 361
Query: 356 KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDM 415
KLWGL+VCHHTSPRFVPFPLRYACEFL+QVFG+Q+NKEVEL+AQ +E+HILRTQT+LCDM
Sbjct: 362 KLWGLMVCHHTSPRFVPFPLRYACEFLLQVFGIQINKEVELAAQAKERHILRTQTLLCDM 421
Query: 416 LLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGST 475
LLRD+PVGI TQ+PNVMDLVKCDGAALYY+ +LW+LG TP+E +IK+I WL EYH GST
Sbjct: 422 LLRDAPVGIFTQSPNVMDLVKCDGAALYYQNQLWVLGSTPSEAEIKNIVAWLQEYHDGST 481
Query: 476 GLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDS-GGK 534
GLSTDSLVEAGYPGA ALGD VCG+AA+KI+SKDF+FWFRSHTAKEIKWGGAKH+
Sbjct: 482 GLSTDSLVEAGYPGAAALGDVVCGMAAIKISSKDFIFWFRSHTAKEIKWGGAKHEPIDAD 541
Query: 535 DGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVA---EDSKMIV 591
D GRKMHPRSSFKAFLEVVK RS+PWEDVEMDAIHSLQLILRGSLQDE A ++K IV
Sbjct: 542 DNGRKMHPRSSFKAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANKNNNAKSIV 601
Query: 592 NVPSVD-DRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQ 650
PS D +I+ + ELR +TNEMVRLIETA PILAVD +G++NGWN+KAAELTGL V +
Sbjct: 602 TAPSDDMKKIQGLLELRTVTNEMVRLIETATAPILAVDITGSINGWNNKAAELTGLPVME 661
Query: 651 AIGTALVDLVAGDSVDVVKNMLSSAFLAI 679
AIG LVDLV DSV+VVK +L+SA I
Sbjct: 662 AIGKPLVDLVIDDSVEVVKQILNSALQGI 690
>gi|357115337|ref|XP_003559446.1| PREDICTED: phytochrome C-like [Brachypodium distachyon]
Length = 1140
Score = 1043 bits (2696), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/690 (72%), Positives = 578/690 (83%), Gaps = 13/690 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNISSSTSNV 59
SS+S N+ SR SSARSK + RV AQT +DA+L +F+ S FDYS+SV+ ++ +
Sbjct: 3 SSRSNNRATCSRGSSARSKHSERVVAQTPVDARLHAEFEGSQRRFDYSSSVSAANRSGAS 62
Query: 60 PSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDA 119
S+ VSAYLQ +QRGR IQPFGC++A + F +L YSENA EMLDL PHAVP I+Q+DA
Sbjct: 63 TSTAVSAYLQNMQRGRYIQPFGCLLAAHPETFALLAYSENAAEMLDLTPHAVPTIDQRDA 122
Query: 120 LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDL 179
LT+G+DVRTLF S A AL KAA FGEVNLLNPIL+H +TSGKPFYAILHRIDVGLVIDL
Sbjct: 123 LTVGVDVRTLFRSQSAVALHKAAVFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVIDL 182
Query: 180 EPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVY 239
EPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGN+SLLCDVLV EVS+LTGYDRVM Y
Sbjct: 183 EPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMAY 242
Query: 240 KFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQ 299
KFHEDEHGEV+AECRR DLEPYLG HYPATDIPQASRFL MKNKVRMICDC A PVK+IQ
Sbjct: 243 KFHEDEHGEVIAECRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCAAVPVKLIQ 302
Query: 300 DKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDND-----QEQG 354
D L QP+SLCGST+RAPHGCHA+YM NMGS+ASLVMS+TINE E+E D D Q +G
Sbjct: 303 DDNLSQPISLCGSTMRAPHGCHAQYMANMGSVASLVMSITINEDEEE-DGDTGSDQQPKG 361
Query: 355 RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCD 414
RKLWGLVVCHH+SPRFVPFPLRYACEFL+QVFG+Q+NKEVEL++Q +E+HILRTQT+LCD
Sbjct: 362 RKLWGLVVCHHSSPRFVPFPLRYACEFLLQVFGIQLNKEVELASQAKERHILRTQTLLCD 421
Query: 415 MLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGS 474
MLLRD+P+GI TQ+PNVMDLVKCDGAAL YR ++ +LG TP+E +IK+I WL EYH GS
Sbjct: 422 MLLRDAPIGIFTQSPNVMDLVKCDGAALCYRNQIMVLGSTPSEGEIKNIVAWLQEYHDGS 481
Query: 475 TGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG-G 533
TGLSTDSLVEAGYPGA ALG+ VCG+AA+KI+SK F+ WFRSHTAKEIKWGGAKH+ G
Sbjct: 482 TGLSTDSLVEAGYPGASALGEIVCGMAAIKISSKGFILWFRSHTAKEIKWGGAKHEPGDA 541
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSK---MI 590
D GRKMHPRSSF+AFLEVVK RS+PWEDVEMDAIHSLQLILRGSLQDE A ++ I
Sbjct: 542 DDNGRKMHPRSSFRAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANNNNNVMSI 601
Query: 591 VNVPSVD-DRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVD 649
V PS D +I+ + ELRI+TNEMVRLIETA PILAVD GN+NGWN+KAAE+TGL
Sbjct: 602 VEAPSDDMKKIQGLLELRIVTNEMVRLIETATAPILAVDIVGNINGWNNKAAEITGLPTT 661
Query: 650 QAIGTALVDLVAGDSVDVVKNMLSSAFLAI 679
+AIG LV +V GDSV+VV +L+SA +
Sbjct: 662 EAIGMPLVQVVHGDSVEVVTQILNSALQGV 691
>gi|7672696|gb|AAF66603.1|AF141942_1 phytochrome C [Oryza sativa Indica Group]
Length = 1137
Score = 1043 bits (2696), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/689 (72%), Positives = 581/689 (84%), Gaps = 12/689 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNISSSTSNV 59
SS+S N+ SRSSSARSK +ARV AQT +DA+L +F+ S FDYS+SV +++ S
Sbjct: 3 SSRSNNRATCSRSSSARSKHSARVVAQTPMDAQLHAEFEGSQRHFDYSSSVG-AANRSGA 61
Query: 60 PSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDA 119
+S VSAYLQ +QRGR +QPFGC++AV + F +L YSENA EMLDL PHAVP I+Q++A
Sbjct: 62 TTSNVSAYLQNMQRGRFVQPFGCLLAVHPETFALLAYSENAAEMLDLTPHAVPTIDQREA 121
Query: 120 LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDL 179
L +G DVRTLF S ALQKAA FG+VNLLNPIL+H +TSGKPFYAI+HRIDVGLVIDL
Sbjct: 122 LAVGTDVRTLFRSHSFVALQKAATFGDVNLLNPILVHARTSGKPFYAIMHRIDVGLVIDL 181
Query: 180 EPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVY 239
EPVNP D+PVTA GA+KSYKLAA+AI+RLQSLPSGN+SLLCDVLV EVS+LTGYDRVM Y
Sbjct: 182 EPVNPVDLPVTATGAIKSYKLAARAIARLQSLPSGNLSLLCDVLVREVSELTGYDRVMAY 241
Query: 240 KFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQ 299
KFHEDEHGEV+AEC+R DLEPYLG HYPATDIPQASRFL MKNKVRMICDC A PVK+IQ
Sbjct: 242 KFHEDEHGEVIAECKRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCSATPVKIIQ 301
Query: 300 DKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTIN----EAEDELDNDQEQGR 355
D L QP+S+CGSTLRAPHGCHA+YM +MGS+ASLVMSVTIN + D + Q +GR
Sbjct: 302 DDSLTQPISICGSTLRAPHGCHAQYMASMGSVASLVMSVTINEDEDDDGDTGSDQQPKGR 361
Query: 356 KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDM 415
KLWGL+VCHHTSPRFVPFPLRYACEFL+QVFG+Q+NKEVEL+AQ +E+HILRTQT+LCDM
Sbjct: 362 KLWGLMVCHHTSPRFVPFPLRYACEFLLQVFGIQINKEVELAAQAKERHILRTQTLLCDM 421
Query: 416 LLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGST 475
LLRD+PVGI TQ+PNVMDLVKCDGAALYY+ +LW+LG TP+E +IK+I WL EYH GST
Sbjct: 422 LLRDAPVGIFTQSPNVMDLVKCDGAALYYQNQLWVLGSTPSEAEIKNIVAWLQEYHDGST 481
Query: 476 GLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDS-GGK 534
GLSTDSLVEAGYPGA ALGD VCG+AA+KI+SKDF+FWFRSHTAKEIKWGGAKH+
Sbjct: 482 GLSTDSLVEAGYPGAAALGDVVCGMAAIKISSKDFIFWFRSHTAKEIKWGGAKHEPIDAD 541
Query: 535 DGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVA---EDSKMIV 591
D GRKMHPRSSFKAFLEVVK RS+PWEDVEMDAIHSLQLILRGSLQDE A ++K IV
Sbjct: 542 DNGRKMHPRSSFKAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANKNNNAKSIV 601
Query: 592 NVPSVD-DRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQ 650
PS D +I+ + ELR +TNEMVRLIETA PILAVD +G++NGWN+KAAELTGL V +
Sbjct: 602 TAPSDDMKKIQGLLELRTVTNEMVRLIETATAPILAVDITGSINGWNNKAAELTGLPVME 661
Query: 651 AIGTALVDLVAGDSVDVVKNMLSSAFLAI 679
AIG LVDLV DSV+VVK +L+SA I
Sbjct: 662 AIGKPLVDLVIDDSVEVVKQILNSALQGI 690
>gi|108711122|gb|ABF98917.1| Phytochrome C, putative, expressed [Oryza sativa Japonica Group]
Length = 957
Score = 1042 bits (2694), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/689 (72%), Positives = 581/689 (84%), Gaps = 12/689 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNISSSTSNV 59
SS+S N+ SRSSSARSK +ARV AQT +DA+L +F+ S FDYS+SV +++ S
Sbjct: 3 SSRSNNRATCSRSSSARSKHSARVVAQTPMDAQLHAEFEGSQRHFDYSSSVG-AANRSGA 61
Query: 60 PSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDA 119
+S VSAYLQ +QRGR +QPFGC++AV + F +L YSENA EMLDL PHAVP I+Q++A
Sbjct: 62 TTSNVSAYLQNMQRGRFVQPFGCLLAVHPETFALLAYSENAAEMLDLTPHAVPTIDQREA 121
Query: 120 LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDL 179
L +G DVRTLF S ALQKAA FG+VNLLNPIL+H +TSGKPFYAI+HRIDVGLVIDL
Sbjct: 122 LAVGTDVRTLFRSHSFVALQKAATFGDVNLLNPILVHARTSGKPFYAIMHRIDVGLVIDL 181
Query: 180 EPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVY 239
EPVNP D+PVTA GA+KSYKLAA+AI+RLQSLPSGN+SLLCDVLV EVS+LTGYDRVM Y
Sbjct: 182 EPVNPVDLPVTATGAIKSYKLAARAIARLQSLPSGNLSLLCDVLVREVSELTGYDRVMAY 241
Query: 240 KFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQ 299
KFHEDEHGEV+AEC+R DLEPYLG HYPATDIPQASRFL MKNKVRMICDC A PVK+IQ
Sbjct: 242 KFHEDEHGEVIAECKRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCSATPVKIIQ 301
Query: 300 DKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTIN----EAEDELDNDQEQGR 355
D L QP+S+CGSTLRAPHGCHA+YM +MGS+ASLVMSVTIN + D + Q +GR
Sbjct: 302 DDSLTQPISICGSTLRAPHGCHAQYMASMGSVASLVMSVTINEDEDDDGDTGSDQQPKGR 361
Query: 356 KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDM 415
KLWGL+VCHHTSPRFVPFPLRYACEFL+QVFG+Q+NKEVEL+AQ +E+HILRTQT+LCDM
Sbjct: 362 KLWGLMVCHHTSPRFVPFPLRYACEFLLQVFGIQINKEVELAAQAKERHILRTQTLLCDM 421
Query: 416 LLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGST 475
LLRD+PVGI TQ+PNVMDLVKCDGAALYY+ +LW+LG TP+E +IK+I WL EYH GST
Sbjct: 422 LLRDAPVGIFTQSPNVMDLVKCDGAALYYQNQLWVLGSTPSEAEIKNIVAWLQEYHDGST 481
Query: 476 GLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDS-GGK 534
GLSTDSLVEAGYPGA ALGD VCG+AA+KI+SKDF+FWFRSHTAKEIKWGGAKH+
Sbjct: 482 GLSTDSLVEAGYPGAAALGDVVCGMAAIKISSKDFIFWFRSHTAKEIKWGGAKHEPIDAD 541
Query: 535 DGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVA---EDSKMIV 591
D GRKMHPRSSFKAFLEVVK RS+PWEDVEMDAIHSLQLILRGSLQDE A ++K IV
Sbjct: 542 DNGRKMHPRSSFKAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANKNNNAKSIV 601
Query: 592 NVPSVD-DRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQ 650
PS D +I+ + ELR +TNEMVRLIETA PILAVD +G++NGWN+KAAELTGL V +
Sbjct: 602 TAPSDDMKKIQGLLELRTVTNEMVRLIETATAPILAVDITGSINGWNNKAAELTGLPVME 661
Query: 651 AIGTALVDLVAGDSVDVVKNMLSSAFLAI 679
AIG LVDLV DSV+VVK +L+SA I
Sbjct: 662 AIGKPLVDLVIDDSVEVVKQILNSALQGI 690
>gi|158513185|sp|A2XM23.2|PHYC_ORYSI RecName: Full=Phytochrome C
Length = 1137
Score = 1039 bits (2686), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/689 (72%), Positives = 580/689 (84%), Gaps = 12/689 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNISSSTSNV 59
SS+S N+ SRSSSARSK +ARV AQT +DA+L +F+ S FDYS+SV +++ S
Sbjct: 3 SSRSNNRATCSRSSSARSKHSARVVAQTPMDAQLHAEFEGSQRHFDYSSSVG-AANRSGA 61
Query: 60 PSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDA 119
+S VSAYLQ +QRGR +QPFGC++AV + F +L YSENA EMLDL PHAVP I+Q++A
Sbjct: 62 TTSNVSAYLQNMQRGRFVQPFGCLLAVHPETFALLAYSENAAEMLDLTPHAVPTIDQREA 121
Query: 120 LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDL 179
L +G DVRTLF S ALQKAA FG+VNLLNPIL+H +TSGKPFYAI+HRIDVGLVIDL
Sbjct: 122 LAVGTDVRTLFRSHSFVALQKAATFGDVNLLNPILVHARTSGKPFYAIMHRIDVGLVIDL 181
Query: 180 EPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVY 239
EPVNP D+PVTA GA+KSYKLAA+AI+RLQSLPSGN+SLLCDVLV EVS+LTGYDRVM Y
Sbjct: 182 EPVNPVDLPVTATGAIKSYKLAARAIARLQSLPSGNLSLLCDVLVREVSELTGYDRVMAY 241
Query: 240 KFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQ 299
KFHEDEHGEV+AEC+R DLEPYLG HYPATDIPQASRFL MKNKVRMICDC A PVK+IQ
Sbjct: 242 KFHEDEHGEVIAECKRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCSATPVKIIQ 301
Query: 300 DKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTIN----EAEDELDNDQEQGR 355
D L QP+S+CGSTLRAPHGCHA+YM +MGS+ASLVMSVTIN + D + Q +GR
Sbjct: 302 DDSLTQPISICGSTLRAPHGCHAQYMASMGSVASLVMSVTINEDEDDDGDTGSDQQPKGR 361
Query: 356 KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDM 415
KLWGL+VCHHTSPRFVPFPLRYACEFL+QVFG+Q+NKEVEL+AQ +E+HILRTQT+LCDM
Sbjct: 362 KLWGLMVCHHTSPRFVPFPLRYACEFLLQVFGIQINKEVELAAQAKERHILRTQTLLCDM 421
Query: 416 LLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGST 475
LLRD+PVGI TQ+PNVMDLVKCDGAALYY+ +LW+LG TP+E +IK+I WL EYH GST
Sbjct: 422 LLRDAPVGIFTQSPNVMDLVKCDGAALYYQNQLWVLGSTPSEAEIKNIVAWLQEYHDGST 481
Query: 476 GLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDS-GGK 534
GLSTDSLVEAGYPGA ALGD V G+AA+KI+SKDF+FWFRSHTAKEIKWGGAKH+
Sbjct: 482 GLSTDSLVEAGYPGAAALGDVVYGMAAIKISSKDFIFWFRSHTAKEIKWGGAKHEPIDAD 541
Query: 535 DGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVA---EDSKMIV 591
D GRKMHPRSSFKAFLEVVK RS+PWEDVEMDAIHSLQLILRGSLQDE A ++K IV
Sbjct: 542 DNGRKMHPRSSFKAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANKNNNAKSIV 601
Query: 592 NVPSVD-DRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQ 650
PS D +I+ + ELR +TNEMVRLIETA PILAVD +G++NGWN+KAAELTGL V +
Sbjct: 602 TAPSDDMKKIQGLLELRTVTNEMVRLIETATAPILAVDITGSINGWNNKAAELTGLPVME 661
Query: 651 AIGTALVDLVAGDSVDVVKNMLSSAFLAI 679
AIG LVDLV DSV+VVK +L+SA I
Sbjct: 662 AIGKPLVDLVIDDSVEVVKQILNSALQGI 690
>gi|51556887|gb|AAU06214.1| phytochrome C [Triticum aestivum]
Length = 1139
Score = 1037 bits (2681), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/685 (73%), Positives = 573/685 (83%), Gaps = 10/685 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNISSSTSNV 59
SS+S N+ SR SSARSK + RV AQT +DA+L +F+ S FDYS+SV+ + +
Sbjct: 3 SSRSNNRPACSRGSSARSKHSERVVAQTPVDARLHAEFEGSQRHFDYSSSVSALNRSGAS 62
Query: 60 PSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDA 119
SS VSAYLQ +QRGR IQPFGC++A+ ++F +L YSENA EMLDL PHAVP I+Q+DA
Sbjct: 63 TSSAVSAYLQNMQRGRYIQPFGCLLAIHSESFALLAYSENAAEMLDLTPHAVPTIDQRDA 122
Query: 120 LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDL 179
L +G DVRTLF S A AL KAA FGEVNLLNPIL+H +TSGKPFYAILHRIDVGLVIDL
Sbjct: 123 LAVGADVRTLFRSQSAVALHKAAVFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVIDL 182
Query: 180 EPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVY 239
EPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGN+SLLCDVLV EVS+LTGYDRVM Y
Sbjct: 183 EPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMAY 242
Query: 240 KFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQ 299
KFHEDEHGEV+AECRR DLEPYLG HYPATDIPQASRFL MKNKVRMICDC A PVK+IQ
Sbjct: 243 KFHEDEHGEVIAECRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCAASPVKLIQ 302
Query: 300 DKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTIN----EAEDELDNDQEQGR 355
D L QP+SLCGST+RAPHGCHA+YM NMGSIASLVMS+TIN E D + Q +GR
Sbjct: 303 DDNLSQPISLCGSTMRAPHGCHAQYMANMGSIASLVMSITINEDDDEDGDTGSDQQPKGR 362
Query: 356 KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDM 415
KLWGLVVCHHTSPRFVPFPLRYACEFL+QVFG+Q+NKEVEL++Q +E+HILRTQT+LCDM
Sbjct: 363 KLWGLVVCHHTSPRFVPFPLRYACEFLLQVFGIQLNKEVELASQAKERHILRTQTLLCDM 422
Query: 416 LLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGST 475
LLRD+PVGI TQ+PNVMDLVKCDGAAL Y+ ++ +LG TP+E +IK I WLLE H GST
Sbjct: 423 LLRDAPVGIFTQSPNVMDLVKCDGAALCYQNQIMVLGSTPSEGEIKKIVAWLLECHDGST 482
Query: 476 GLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG-GK 534
GLSTDSL+EAGYPGA ALG+ VCG+AA+KI+SK F+FWFRSHTAKEIKWGGAK + G
Sbjct: 483 GLSTDSLLEAGYPGASALGEVVCGMAAIKISSKGFIFWFRSHTAKEIKWGGAKQEPGDAD 542
Query: 535 DGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKM--IVN 592
D GR+MHPRSSF+AFLEVVK RS+PWEDVEMDAIHSLQLILRGSLQDE A D+ IV
Sbjct: 543 DNGRRMHPRSSFRAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDATDNNAGSIVE 602
Query: 593 VPSVD-DRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
PS D +I+ + ELRI+TNEMVRLIETA PILAVD GN+NGWN+K AE+TGL +A
Sbjct: 603 APSDDIKKIQGLLELRIVTNEMVRLIETATAPILAVDIVGNINGWNNKVAEITGLPTTEA 662
Query: 652 IGTALVDLVAGDSVDVVKNMLSSAF 676
IG LVDLV GDSV+VVK ML+SA
Sbjct: 663 IGMLLVDLVEGDSVEVVKQMLNSAL 687
>gi|51556879|gb|AAU06210.1| phytochrome C [Triticum aestivum]
gi|51556881|gb|AAU06211.1| phytochrome C [Triticum aestivum]
Length = 1139
Score = 1036 bits (2680), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/685 (73%), Positives = 575/685 (83%), Gaps = 10/685 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNISSSTSNV 59
SS+S N+ SR SSARSK + RV AQT +DA+L +F+ S FDYS+SV+ + +
Sbjct: 3 SSRSNNRPACSRGSSARSKHSERVVAQTPVDARLHAEFEGSQRHFDYSSSVSALNRSGAS 62
Query: 60 PSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDA 119
SS VSAYLQ +QRGR IQPFGC++A+ ++F +L YSENA E+LDL PHAVP I+Q+DA
Sbjct: 63 TSSAVSAYLQNMQRGRYIQPFGCLLAIHPESFALLAYSENAAEILDLTPHAVPTIDQRDA 122
Query: 120 LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDL 179
L +G DVRTLF S A AL KAA FGEVNLLNPIL+H +TSGKPFYAILHRIDVGLVIDL
Sbjct: 123 LAVGADVRTLFRSQSAVALHKAAVFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVIDL 182
Query: 180 EPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVY 239
EPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGN+SLLCDVLV EVS+LTGYDRVM Y
Sbjct: 183 EPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMAY 242
Query: 240 KFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQ 299
KFHEDEHGEV+AECRR DLEPYLG HYPATDIPQASRFL MKNKVRMICDC A PVK+IQ
Sbjct: 243 KFHEDEHGEVIAECRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCAASPVKLIQ 302
Query: 300 DKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTIN----EAEDELDNDQEQGR 355
D L QP+SLCGST+RAPHGCHA+YM NMGSIASLVMS+TIN E D + Q +GR
Sbjct: 303 DDNLSQPISLCGSTMRAPHGCHAQYMANMGSIASLVMSITINEDDDEDGDTGSDQQPKGR 362
Query: 356 KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDM 415
KLWGLVVCHHTSPRFVPFPLRYACEFL+QVFG+Q+NKEVEL++Q +E+HILRTQT+LCDM
Sbjct: 363 KLWGLVVCHHTSPRFVPFPLRYACEFLLQVFGIQLNKEVELASQAKERHILRTQTLLCDM 422
Query: 416 LLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGST 475
LLRD+PVGI TQ+PNVMDLVKCDGAAL Y+ ++ +LG TP+E +IK I WLLE H GST
Sbjct: 423 LLRDAPVGIFTQSPNVMDLVKCDGAALCYQNQIMVLGSTPSEGEIKKIVAWLLECHDGST 482
Query: 476 GLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG-GK 534
GLSTDSL+EAGYPGA ALG+ VCG+AA+KI+SK F+FWFRSHTAKEIKWGGAKH+ G
Sbjct: 483 GLSTDSLLEAGYPGASALGEVVCGMAAIKISSKGFIFWFRSHTAKEIKWGGAKHEPGDAD 542
Query: 535 DGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAED--SKMIVN 592
D GR+MHPRSSF+AFLEVVK RS+PWEDVEMDAIHSLQLILRGSLQDE A D ++ IV
Sbjct: 543 DNGRRMHPRSSFRAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANDNNARSIVE 602
Query: 593 VPSVD-DRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
PS D +I+ + EL+I+TNEMVRLIETA PILAVD GN+NGWN+K AE+TGL +A
Sbjct: 603 APSDDIKKIQGLLELKIVTNEMVRLIETATAPILAVDIVGNINGWNNKVAEITGLPTTEA 662
Query: 652 IGTALVDLVAGDSVDVVKNMLSSAF 676
IG LVDLV GDSV+VVK ML+SA
Sbjct: 663 IGMLLVDLVEGDSVEVVKQMLNSAL 687
>gi|37926897|gb|AAP06790.1| phytochrome C1 apoprotein [Zea mays]
gi|414872852|tpg|DAA51409.1| TPA: phytochromeC1 [Zea mays]
Length = 1135
Score = 1036 bits (2679), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/690 (73%), Positives = 576/690 (83%), Gaps = 13/690 (1%)
Query: 1 MSSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNISSSTSN 58
MS S N+ SRSSSARSK +ARV AQT +DA+L +F+ S FDYS+SV ++ S
Sbjct: 1 MSLPSNNRRTCSRSSSARSKHSARVVAQTPVDAQLHAEFEGSQRHFDYSSSVGAANRPS- 59
Query: 59 VPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
+STVS YLQ +QRGR IQPFGC++AV F +L YSENAPEMLDL PHAVP I+Q+D
Sbjct: 60 ASTSTVSTYLQNMQRGRYIQPFGCLLAVHPDTFALLAYSENAPEMLDLTPHAVPTIDQRD 119
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
AL +G+DVRTLF S + AL KAA FGEVNLLNPIL+H +TSGKPFYAILHRIDVGLVID
Sbjct: 120 ALGIGVDVRTLFRSQSSVALHKAAAFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVID 179
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
LEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGN+SLLCDVLV EVS+LTGYDRVM
Sbjct: 180 LEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMA 239
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKF+EDEHGEV++ECRR DLEPYLG HYPATDIPQASRFL MKNKVRMICDC A PVKVI
Sbjct: 240 YKFYEDEHGEVISECRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCCATPVKVI 299
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDND-----QEQ 353
QD L QPLSLCGSTLRA HGCHA+YM NMGS+ASL MSVTINE E+E D D Q +
Sbjct: 300 QDDSLAQPLSLCGSTLRASHGCHAQYMANMGSVASLAMSVTINEDEEE-DGDTGSDQQPK 358
Query: 354 GRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
GRKLWGLVVCHHTSPRFVPFPLRYACEFL+QVFG+Q+NKEVEL+AQ +E+HILRTQT+LC
Sbjct: 359 GRKLWGLVVCHHTSPRFVPFPLRYACEFLLQVFGIQLNKEVELAAQAKERHILRTQTLLC 418
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+PVGI T++PNVMDLVKCDGAALYY+ +L +LG TP+E +IK IA WL + H G
Sbjct: 419 DMLLRDAPVGIFTRSPNVMDLVKCDGAALYYQNQLLVLGSTPSESEIKSIATWLQDNHDG 478
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDS-G 532
STGLSTDSLVEAGYPGA+AL + VCG+AA+KI+SKDF+FWFRSHT KEIKWGGAKH+
Sbjct: 479 STGLSTDSLVEAGYPGAVALREVVCGMAAIKISSKDFIFWFRSHTTKEIKWGGAKHEPVD 538
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVA--EDSKMI 590
D GR+MHPRSSFKAFLEVVK RS+PWEDVEMDAIHSLQLILRGSL DE A + + I
Sbjct: 539 ADDDGRRMHPRSSFKAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLPDEDANRNNVRSI 598
Query: 591 VNVPSVD-DRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVD 649
V PS D +I+ + ELR +TNEMVRLIETA P+LAVD +GN+NGWN+KAAELTGL V
Sbjct: 599 VKAPSDDMKKIQGLLELRTVTNEMVRLIETATAPVLAVDIAGNINGWNNKAAELTGLPVM 658
Query: 650 QAIGTALVDLVAGDSVDVVKNMLSSAFLAI 679
+AIG L+DLV DS++VVK +L SA I
Sbjct: 659 EAIGRPLIDLVVTDSIEVVKQILDSALQGI 688
>gi|51556885|gb|AAU06213.1| phytochrome C [Triticum aestivum]
Length = 1139
Score = 1036 bits (2678), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/685 (73%), Positives = 575/685 (83%), Gaps = 10/685 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNISSSTSNV 59
SS+S N+ SR SSARSK + RV AQT +DA+L +F+ S FDYS+SV+ + +
Sbjct: 3 SSRSNNRPACSRGSSARSKHSERVVAQTPVDARLHAEFEGSQRHFDYSSSVSALNRSGAS 62
Query: 60 PSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDA 119
SS VSAY+Q +QRGR IQPFGC++A+ ++F +L YSENA E+LDL PHAVP I+Q+DA
Sbjct: 63 TSSAVSAYIQNMQRGRYIQPFGCLLAIHPESFALLAYSENAAEILDLTPHAVPTIDQRDA 122
Query: 120 LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDL 179
L +G DVRTLF S A AL KAA FGEVNLLNPIL+H +TSGKPFYAILHRIDVGLVIDL
Sbjct: 123 LAVGADVRTLFRSQSAVALHKAAVFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVIDL 182
Query: 180 EPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVY 239
EPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGN+SLLCDVLV EVS+LTGYDRVM Y
Sbjct: 183 EPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMAY 242
Query: 240 KFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQ 299
KFHEDEHGEV+AECRR DLEPYLG HYPATDIPQASRFL MKNKVRMICDC A PVK+IQ
Sbjct: 243 KFHEDEHGEVIAECRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCAASPVKLIQ 302
Query: 300 DKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTIN----EAEDELDNDQEQGR 355
D L QP+SLCGST+RAPHGCHA+YM NMGSIASLVMS+TIN E D + Q +GR
Sbjct: 303 DDNLSQPISLCGSTMRAPHGCHAQYMANMGSIASLVMSITINEDDDEDGDTGSDQQPKGR 362
Query: 356 KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDM 415
KLWGLVVCHHTSPRFVPFPLRYACEFL+QVFG+Q+NKEVEL++Q +E+HILRTQT+LCDM
Sbjct: 363 KLWGLVVCHHTSPRFVPFPLRYACEFLLQVFGIQLNKEVELASQAKERHILRTQTLLCDM 422
Query: 416 LLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGST 475
LLRD+PVGI TQ+PNVMDLVKCDGAAL Y+ ++ +LG TP+E +IK I WLLE H GST
Sbjct: 423 LLRDAPVGIFTQSPNVMDLVKCDGAALCYQNQIMVLGSTPSEGEIKKIVAWLLECHDGST 482
Query: 476 GLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG-GK 534
GLSTDSL+EAGYPGA ALG+ VCG+AA+KI+SK F+FWFRSHTAKEIKWGGAKH+ G
Sbjct: 483 GLSTDSLLEAGYPGASALGEVVCGMAAIKISSKGFIFWFRSHTAKEIKWGGAKHEPGDAD 542
Query: 535 DGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAED--SKMIVN 592
D GR+MHPRSSF+AFLEVVK RS+PWEDVEMDAIHSLQLILRGSLQDE A D ++ IV
Sbjct: 543 DNGRRMHPRSSFRAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANDNNARSIVE 602
Query: 593 VPSVD-DRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
PS D +I+ + EL+I+TNEMVRLIETA PILAVD GN+NGWN+K AE+TGL +A
Sbjct: 603 APSDDIKKIQGLLELKIVTNEMVRLIETATAPILAVDIVGNINGWNNKVAEITGLPTTEA 662
Query: 652 IGTALVDLVAGDSVDVVKNMLSSAF 676
IG LVDLV GDSV+VVK ML+SA
Sbjct: 663 IGMLLVDLVEGDSVEVVKQMLNSAL 687
>gi|119926110|emb|CAC82798.2| phytochrome C [Triticum aestivum]
Length = 1139
Score = 1035 bits (2676), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/685 (73%), Positives = 575/685 (83%), Gaps = 10/685 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNISSSTSNV 59
SS+S N+ SR SSARSK + RV AQT +DA+L +F+ S FDYS+SV+ + +
Sbjct: 3 SSRSNNRPACSRGSSARSKHSERVVAQTPVDARLHAEFEGSQRHFDYSSSVSALNRSGAS 62
Query: 60 PSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDA 119
SS VSAY+Q +QRGR IQPFGC++A+ ++F +L YSENA E+LDL PHAVP I+Q+DA
Sbjct: 63 TSSAVSAYIQNMQRGRYIQPFGCLLAIHPESFALLAYSENAAEILDLTPHAVPTIDQRDA 122
Query: 120 LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDL 179
L +G DVRTLF S A AL KAA FGEVNLLNPIL+H +TSGKPFYAILHRIDVGLVIDL
Sbjct: 123 LAVGADVRTLFRSQSAVALHKAAVFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVIDL 182
Query: 180 EPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVY 239
EPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGN+SLLCDVLV EVS+LTGYDRVM Y
Sbjct: 183 EPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMAY 242
Query: 240 KFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQ 299
KFHEDEHGEV+AECRR DLEPYLG HYPATDIPQASRFL MKNKVRMICDC A PVK+IQ
Sbjct: 243 KFHEDEHGEVIAECRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCAASPVKLIQ 302
Query: 300 DKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTIN----EAEDELDNDQEQGR 355
D L QP+SLCGST+RAPHGCHA+YM NMGSIASLVMS+TIN E D + Q +GR
Sbjct: 303 DDNLSQPISLCGSTMRAPHGCHAQYMANMGSIASLVMSITINEDDDEDGDTGSDQQPKGR 362
Query: 356 KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDM 415
KLWGLVVCHHTSPRFVPFPLRYACEFL+QVFG+Q+NKEVEL++Q +E+HILRTQT+LCDM
Sbjct: 363 KLWGLVVCHHTSPRFVPFPLRYACEFLLQVFGIQLNKEVELASQAKERHILRTQTLLCDM 422
Query: 416 LLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGST 475
LLRD+PVGI TQ+PNVMDLVKCDGAAL Y+ ++ +LG TP+E +IK I WLLE H GST
Sbjct: 423 LLRDAPVGIFTQSPNVMDLVKCDGAALCYQNQIMVLGSTPSEGEIKKIVAWLLECHDGST 482
Query: 476 GLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG-GK 534
GLSTDSL+EAGYPGA ALG+ VCG+AA+KI+SK F+FWFRSHTAKEIKWGGAKH+ G
Sbjct: 483 GLSTDSLLEAGYPGASALGEVVCGMAAIKISSKGFIFWFRSHTAKEIKWGGAKHEPGDAD 542
Query: 535 DGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAED--SKMIVN 592
D GR+MHPRSSF+AFLEVVK RS+PWEDVEMDAIHSLQLILRGSLQDE A D ++ IV
Sbjct: 543 DNGRRMHPRSSFRAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANDNNARSIVE 602
Query: 593 VPSVD-DRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
PS D +I+ + EL+I+TNEMVRLIETA PILAVD GN+NGWN+K AE+TGL +A
Sbjct: 603 APSDDIKKIQGLLELKIVTNEMVRLIETATAPILAVDIVGNINGWNNKVAEITGLPTTEA 662
Query: 652 IGTALVDLVAGDSVDVVKNMLSSAF 676
IG LVDLV GDSV+VVK ML+SA
Sbjct: 663 IGMLLVDLVEGDSVEVVKQMLNSAL 687
>gi|51556883|gb|AAU06212.1| phytochrome C [Triticum aestivum]
Length = 1139
Score = 1034 bits (2674), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/685 (73%), Positives = 574/685 (83%), Gaps = 10/685 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNISSSTSNV 59
SS+S N+ SR SSARSK + RV AQT +DA+L +F+ S FDYS+SV+ + +
Sbjct: 3 SSRSNNRPACSRGSSARSKHSERVVAQTPVDARLHAEFEGSQRHFDYSSSVSALNRSGAS 62
Query: 60 PSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDA 119
SS VSAYLQ +QRGR IQPFGC++A+ ++F +L YSENA E+LDL PHAVP I+Q+DA
Sbjct: 63 TSSAVSAYLQNMQRGRYIQPFGCLLAIHPESFALLAYSENAAEILDLTPHAVPTIDQRDA 122
Query: 120 LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDL 179
L +G DVRTLF S A AL KAA FGEVNLLNPIL+H +TSGKPFYAILHRIDVGLVIDL
Sbjct: 123 LAVGADVRTLFRSQSAVALHKAAVFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVIDL 182
Query: 180 EPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVY 239
EPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGN+SLLCDVLV EVS+LTGYDRVM Y
Sbjct: 183 EPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMAY 242
Query: 240 KFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQ 299
KFHEDEHGEV+AECRR DLEPYLG HYPATDIPQASRFL MKNKVRMICDC A PVK+IQ
Sbjct: 243 KFHEDEHGEVIAECRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCAASPVKLIQ 302
Query: 300 DKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTIN----EAEDELDNDQEQGR 355
D L QP+SLCGST+RAPHGCHA+YM NMGSIASLVMS+TIN E D + Q +GR
Sbjct: 303 DDDLSQPISLCGSTMRAPHGCHAQYMANMGSIASLVMSITINEDDDEDGDTGSDQQPKGR 362
Query: 356 KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDM 415
KLWGLVVCHHTSPRFVPFPLRYACEFL+QVFG+Q+NKEVEL++Q +E+HILRTQT+LCDM
Sbjct: 363 KLWGLVVCHHTSPRFVPFPLRYACEFLLQVFGIQLNKEVELASQAKERHILRTQTLLCDM 422
Query: 416 LLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGST 475
LLRD+PVGI TQ+PNVMDLVKCDGAAL Y+ ++ +LG TP+E +I I WLLE H GST
Sbjct: 423 LLRDAPVGIFTQSPNVMDLVKCDGAALCYQNQIMVLGSTPSEGEITKIVAWLLECHDGST 482
Query: 476 GLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG-GK 534
GLSTDSL+EAGYPGA ALG+ VCG+AA+KI+SK F+FWFRSHTAKEIKWGGAKH+ G
Sbjct: 483 GLSTDSLLEAGYPGASALGEVVCGMAAIKISSKGFIFWFRSHTAKEIKWGGAKHEPGDAD 542
Query: 535 DGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAED--SKMIVN 592
D GR+MHPRSSF+AFLEVVK RS+PWEDVEMDAIHSLQLILRGSLQDE A D ++ IV
Sbjct: 543 DNGRRMHPRSSFRAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANDNNARSIVE 602
Query: 593 VPSVD-DRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
PS D +I+ + EL+I+TNEMVRLIETA PILAVD GN+NGWN+K AE+TGL +A
Sbjct: 603 APSDDIKKIQGLLELKIVTNEMVRLIETATAPILAVDIVGNINGWNNKVAEITGLPTTEA 662
Query: 652 IGTALVDLVAGDSVDVVKNMLSSAF 676
IG LVDLV GDSV+VVK ML+SA
Sbjct: 663 IGMLLVDLVEGDSVEVVKQMLNSAL 687
>gi|51556877|gb|AAU06209.1| phytochrome C [Triticum spelta]
Length = 1139
Score = 1033 bits (2671), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 500/685 (72%), Positives = 575/685 (83%), Gaps = 10/685 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNISSSTSNV 59
SS+S N+ SR SSARSK + RV AQT +DA+L +F+ S FDYS+SV+ + +
Sbjct: 3 SSRSNNRPACSRGSSARSKHSERVVAQTPVDARLHAEFEGSQRHFDYSSSVSALNRSGAS 62
Query: 60 PSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDA 119
SS VSAYLQ +QRGR IQPFGC++A+ ++F +L Y+ENA E+LDL PHAVP I+Q+DA
Sbjct: 63 TSSAVSAYLQNMQRGRYIQPFGCLLAIHPESFALLAYNENAAEILDLTPHAVPTIDQRDA 122
Query: 120 LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDL 179
L +G DVRTLF S A AL KAA FGEVNLLNPIL+H +TSGKPFYAILHRIDVGLVIDL
Sbjct: 123 LAVGADVRTLFRSQSAVALHKAAVFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVIDL 182
Query: 180 EPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVY 239
EPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGN+SLLCDVLV EVS+LTGYDRVM Y
Sbjct: 183 EPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMAY 242
Query: 240 KFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQ 299
KFHEDEHGEV+AECRR DLEPYLG HYPATDIPQASRFL MKNKVRMICDC A PVK+IQ
Sbjct: 243 KFHEDEHGEVIAECRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCAASPVKLIQ 302
Query: 300 DKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTIN----EAEDELDNDQEQGR 355
D L QP+SLCGST+RAPHGCHA+YM NMGSIASLVMS+TIN E D + Q +GR
Sbjct: 303 DDNLSQPISLCGSTMRAPHGCHAQYMANMGSIASLVMSITINEDDDEDGDTGSDQQPKGR 362
Query: 356 KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDM 415
KLWGLVVCHHTSPRFVPFPLRYACEFL+QVFG+Q+NKEVEL++Q +E+HILRTQT+LCDM
Sbjct: 363 KLWGLVVCHHTSPRFVPFPLRYACEFLLQVFGIQLNKEVELASQAKERHILRTQTLLCDM 422
Query: 416 LLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGST 475
LLRD+PVGI TQ+PNVMDLVKCDGAAL Y+ ++ +LG TP+E +IK I WLLE H GST
Sbjct: 423 LLRDAPVGIFTQSPNVMDLVKCDGAALCYQNQIMVLGSTPSEGEIKKIVAWLLECHDGST 482
Query: 476 GLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG-GK 534
GLSTDSL+EAGYPGA ALG+ VCG+AA+KI+SK F+FWFRSHTAKEIKWGGAKH+ G
Sbjct: 483 GLSTDSLLEAGYPGASALGEVVCGMAAIKISSKGFIFWFRSHTAKEIKWGGAKHEPGDAD 542
Query: 535 DGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAED--SKMIVN 592
D GR+MHPRSSF+AFLEVVK RS+PWEDVEMDAIHSLQLILRGSLQDE A D ++ IV
Sbjct: 543 DNGRRMHPRSSFRAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANDNNARSIVE 602
Query: 593 VPSVD-DRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
PS D +I+ + EL+I+TNEMVRLIETA PILAVD GN++GWN+K AE+TGL +A
Sbjct: 603 APSDDIKKIQGLLELKIVTNEMVRLIETATAPILAVDIVGNISGWNNKVAEITGLPTTEA 662
Query: 652 IGTALVDLVAGDSVDVVKNMLSSAF 676
IG LVDLV GDSV+VVK ML+SA
Sbjct: 663 IGMLLVDLVEGDSVEVVKQMLNSAL 687
>gi|82491942|gb|ABB77851.1| phytochrome C [Hordeum vulgare subsp. vulgare]
Length = 1147
Score = 1021 bits (2640), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 494/672 (73%), Positives = 565/672 (84%), Gaps = 10/672 (1%)
Query: 15 SSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNISSSTSNVPSSTVSAYLQRVQ 72
SSARS+ + RV AQT +DA+L +F+ S FDYS+SV+ + + SS VSA+LQ +Q
Sbjct: 16 SSARSRHSERVVAQTPVDAQLHAEFESSHRHFDYSSSVSALNRSGASTSSAVSAFLQNMQ 75
Query: 73 RGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTS 132
RGR IQPFGC++A+ ++F +L YSENA EMLDL PHAVP I+Q+DAL +G DVRTLF S
Sbjct: 76 RGRYIQPFGCLLAIHPESFALLAYSENAAEMLDLTPHAVPTIDQRDALAVGADVRTLFRS 135
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
A AL KAA FGEVNLLNPIL+H +TSGKPFYAILHRIDVGLVIDLEPVNP DVPVTAA
Sbjct: 136 QSAVALHKAAVFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVIDLEPVNPADVPVTAA 195
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GALKSYKLAAKAISRLQSLPSGN+SLLCDVLV EVS+LTGYDRVM YKFHEDEHGEV+AE
Sbjct: 196 GALKSYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMAYKFHEDEHGEVIAE 255
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
CRR DLEPYLG HYPATDIPQASRFL MKNKVRMICDC A PVK+IQD L QP+SLCGS
Sbjct: 256 CRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCAASPVKLIQDGNLSQPISLCGS 315
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTIN----EAEDELDNDQEQGRKLWGLVVCHHTSP 368
T+RAPHGCHA+YM NMGSIASLVMSVT+N E D + Q +GRKLWGLVVCHHTSP
Sbjct: 316 TMRAPHGCHAQYMANMGSIASLVMSVTVNEDDDEDGDTGSDQQPKGRKLWGLVVCHHTSP 375
Query: 369 RFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQT 428
RFVPFPLRYACEFL+QVFG+Q+NKEVEL++Q +E+HILRTQT+LCDMLLRD+PVGI TQ+
Sbjct: 376 RFVPFPLRYACEFLLQVFGIQLNKEVELASQAKERHILRTQTLLCDMLLRDAPVGIFTQS 435
Query: 429 PNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYP 488
PNVMDLVKCDGAAL Y+ ++ +LG P+E +IK IA WLLE H GSTGLSTDSL+EAGYP
Sbjct: 436 PNVMDLVKCDGAALCYQNQIMVLGSAPSEGEIKKIAAWLLECHDGSTGLSTDSLLEAGYP 495
Query: 489 GALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG-GKDGGRKMHPRSSFK 547
GA ALG+ VCG+AA+KI+SK F+FWFRSHTAKEIKW GAKH+ G D GR+MHPRSSF+
Sbjct: 496 GASALGEVVCGMAAIKISSKGFIFWFRSHTAKEIKWSGAKHEPGDADDNGRRMHPRSSFR 555
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDS--KMIVNVPSVDDR-IEKID 604
AFLEVVK RS+PWEDVEMDAIHSLQLILRGSLQDE A D+ + IV PS D R I+ +
Sbjct: 556 AFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANDNNVRSIVEAPSDDVRKIQGLL 615
Query: 605 ELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDS 664
ELRI+TNEMVRLIETA PILAVD G++NGWN K AE+TGL +AIG LVDLV GDS
Sbjct: 616 ELRIVTNEMVRLIETATAPILAVDIVGSINGWNGKVAEITGLPTTEAIGMLLVDLVEGDS 675
Query: 665 VDVVKNMLSSAF 676
V+V+K ML+SA
Sbjct: 676 VEVIKQMLNSAM 687
>gi|77963970|gb|ABB13327.1| phytochrome C [Hordeum vulgare subsp. vulgare]
Length = 1139
Score = 1021 bits (2639), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 494/672 (73%), Positives = 565/672 (84%), Gaps = 10/672 (1%)
Query: 15 SSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNISSSTSNVPSSTVSAYLQRVQ 72
SSARS+ + RV AQT +DA+L +F+ S FDYS+SV+ + + SS VSA+LQ +Q
Sbjct: 16 SSARSRHSERVVAQTPVDAQLHAEFESSHRHFDYSSSVSALNRSGASTSSAVSAFLQNMQ 75
Query: 73 RGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTS 132
RGR IQPFGC++A+ ++F +L YSENA EMLDL PHAVP I+Q+DAL +G DVRTLF S
Sbjct: 76 RGRYIQPFGCLLAIHPESFALLAYSENAAEMLDLTPHAVPTIDQRDALAVGADVRTLFRS 135
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
A AL KAA FGEVNLLNPIL+H +TSGKPFYAILHRIDVGLVIDLEPVNP DVPVTAA
Sbjct: 136 QSAVALHKAAVFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVIDLEPVNPADVPVTAA 195
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GALKSYKLAAKAISRLQSLPSGN+SLLCDVLV EVS+LTGYDRVM YKFHEDEHGEV+AE
Sbjct: 196 GALKSYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMAYKFHEDEHGEVIAE 255
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
CRR DLEPYLG HYPATDIPQASRFL MKNKVRMICDC A PVK+IQD L QP+SLCGS
Sbjct: 256 CRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCAASPVKLIQDGNLSQPISLCGS 315
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTIN----EAEDELDNDQEQGRKLWGLVVCHHTSP 368
T+RAPHGCHA+YM NMGSIASLVMSVT+N E D + Q +GRKLWGLVVCHHTSP
Sbjct: 316 TMRAPHGCHAQYMANMGSIASLVMSVTVNEDDDEDGDTGSDQQPKGRKLWGLVVCHHTSP 375
Query: 369 RFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQT 428
RFVPFPLRYACEFL+QVFG+Q+NKEVEL++Q +E+HILRTQT+LCDMLLRD+PVGI TQ+
Sbjct: 376 RFVPFPLRYACEFLLQVFGIQLNKEVELASQAKERHILRTQTLLCDMLLRDAPVGIFTQS 435
Query: 429 PNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYP 488
PNVMDLVKCDGAAL Y+ ++ +LG P+E +IK IA WLLE H GSTGLSTDSL+EAGYP
Sbjct: 436 PNVMDLVKCDGAALCYQNQIMVLGSAPSEGEIKKIAAWLLECHDGSTGLSTDSLLEAGYP 495
Query: 489 GALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG-GKDGGRKMHPRSSFK 547
GA ALG+ VCG+AA+KI+SK F+FWFRSHTAKEIKW GAKH+ G D GR+MHPRSSF+
Sbjct: 496 GASALGEVVCGMAAIKISSKGFIFWFRSHTAKEIKWSGAKHEPGDADDNGRRMHPRSSFR 555
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDS--KMIVNVPSVDDR-IEKID 604
AFLEVVK RS+PWEDVEMDAIHSLQLILRGSLQDE A D+ + IV PS D R I+ +
Sbjct: 556 AFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANDNNVRSIVEAPSDDVRKIQGLL 615
Query: 605 ELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDS 664
ELRI+TNEMVRLIETA PILAVD G++NGWN K AE+TGL +AIG LVDLV GDS
Sbjct: 616 ELRIVTNEMVRLIETATAPILAVDIVGSINGWNGKVAEITGLPTTEAIGMLLVDLVEGDS 675
Query: 665 VDVVKNMLSSAF 676
V+V+K ML+SA
Sbjct: 676 VEVIKQMLNSAM 687
>gi|77963968|gb|ABB13326.1| phytochrome C [Hordeum vulgare subsp. vulgare]
Length = 1139
Score = 1018 bits (2633), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/672 (73%), Positives = 564/672 (83%), Gaps = 10/672 (1%)
Query: 15 SSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNISSSTSNVPSSTVSAYLQRVQ 72
SSARS+ + RV AQT +DA+L +F+ S FDYS+SV+ + + SS VSA+LQ +Q
Sbjct: 16 SSARSRHSERVVAQTPVDAQLHAEFESSHRHFDYSSSVSALNRSGASTSSAVSAFLQNMQ 75
Query: 73 RGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTS 132
RGR IQPFGC++A+ ++F +L YSENA EMLDL PHAVP I+Q+DAL +G DVRTLF S
Sbjct: 76 RGRYIQPFGCLLAIHPESFALLAYSENAAEMLDLTPHAVPTIDQRDALAVGADVRTLFRS 135
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
A AL KAA FGEVNLLNPIL+H +TSGKPFYAILHRIDVGLVIDLEPVNP DVPVTAA
Sbjct: 136 QSAVALHKAAVFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVIDLEPVNPADVPVTAA 195
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GALKSYKLAAKAISRLQSLPSGN+SLLCDVLV EVS+LTGYDRVM YKFHEDEHGEV+AE
Sbjct: 196 GALKSYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMAYKFHEDEHGEVIAE 255
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
CRR DLEPYLG HYPATDIPQASRFL MKNKVRMICDC A PVK+I D L QP+SLCGS
Sbjct: 256 CRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCAASPVKLIHDGNLSQPISLCGS 315
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTIN----EAEDELDNDQEQGRKLWGLVVCHHTSP 368
T+RAPHGCHA+YM NMGSIASLVMSVT+N E D + Q +GRKLWGLVVCHHTSP
Sbjct: 316 TMRAPHGCHAQYMANMGSIASLVMSVTVNEDDDEDGDTGSDQQPKGRKLWGLVVCHHTSP 375
Query: 369 RFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQT 428
RFVPFPLRYACEFL+QVFG+Q+NKEVEL++Q +E+HILRTQT+LCDMLLRD+PVGI TQ+
Sbjct: 376 RFVPFPLRYACEFLLQVFGIQLNKEVELASQAKERHILRTQTLLCDMLLRDAPVGIFTQS 435
Query: 429 PNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYP 488
PNVMDLVKCDGAAL Y+ ++ +LG P+E +IK IA WLLE H GSTGLSTDSL+EAGYP
Sbjct: 436 PNVMDLVKCDGAALCYQNQIMVLGSAPSEGEIKKIAAWLLECHDGSTGLSTDSLLEAGYP 495
Query: 489 GALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG-GKDGGRKMHPRSSFK 547
GA ALG+ VCG+AA+KI+SK F+FWFRSHTAKEIKW GAKH+ G D GR+MHPRSSF+
Sbjct: 496 GASALGEVVCGMAAIKISSKGFIFWFRSHTAKEIKWSGAKHEPGDADDNGRRMHPRSSFR 555
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDS--KMIVNVPSVDDR-IEKID 604
AFLEVVK RS+PWEDVEMDAIHSLQLILRGSLQDE A D+ + IV PS D R I+ +
Sbjct: 556 AFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANDNNVRSIVEAPSDDVRKIQGLL 615
Query: 605 ELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDS 664
ELRI+TNEMVRLIETA PILAVD G++NGWN K AE+TGL +AIG LVDLV GDS
Sbjct: 616 ELRIVTNEMVRLIETATAPILAVDIVGSINGWNGKVAEITGLPTTEAIGMLLVDLVEGDS 675
Query: 665 VDVVKNMLSSAF 676
V+V+K ML+SA
Sbjct: 676 VEVIKQMLNSAM 687
>gi|326491833|dbj|BAJ98141.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1147
Score = 1018 bits (2632), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/672 (73%), Positives = 564/672 (83%), Gaps = 10/672 (1%)
Query: 15 SSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNISSSTSNVPSSTVSAYLQRVQ 72
SSARS+ + RV AQT +DA+L +F+ S FDYS+SV+ + + SS VSA+LQ +Q
Sbjct: 16 SSARSRHSERVVAQTPVDAQLHAEFESSHRHFDYSSSVSALNRSGASTSSAVSAFLQNMQ 75
Query: 73 RGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTS 132
RGR IQPFGC++A+ ++F +L YSENA EMLDL PHAVP I+Q+DAL +G DVRTLF S
Sbjct: 76 RGRYIQPFGCLLAIHPESFALLAYSENAAEMLDLTPHAVPTIDQRDALAVGADVRTLFRS 135
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
A AL KAA FGEVNLLNPIL+H +TSGKPFYAILHRIDVGLVIDLEPVNP DVPVTAA
Sbjct: 136 QSAVALHKAAVFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVIDLEPVNPADVPVTAA 195
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GALKSYKLAAKAISRLQSLPSGN+SLLCDVLV EVS+LTGYDRVM YKFHEDEHGEV+AE
Sbjct: 196 GALKSYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMAYKFHEDEHGEVIAE 255
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
CRR DLEPYLG HYPATDIPQASRFL MKNKVRMICDC A PVK+IQD L QP+SLCGS
Sbjct: 256 CRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCAASPVKLIQDGNLSQPISLCGS 315
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTIN----EAEDELDNDQEQGRKLWGLVVCHHTSP 368
T+RAPHGCHA+YM NMGSIASLVMSVT+N E D + Q +GRKLWGLVVCHHTSP
Sbjct: 316 TMRAPHGCHAQYMANMGSIASLVMSVTVNEDDDEDGDTGSDQQPKGRKLWGLVVCHHTSP 375
Query: 369 RFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQT 428
RFVP PLRYACEFL+QVFG+Q+NKEVEL++Q +E+HILRTQT+LCDMLLRD+PVGI TQ+
Sbjct: 376 RFVPSPLRYACEFLLQVFGIQLNKEVELASQAKERHILRTQTLLCDMLLRDAPVGIFTQS 435
Query: 429 PNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYP 488
PNVMDLVKCDGAAL Y+ ++ +LG P+E +IK IA WLLE H GSTGLSTDSL+EAGYP
Sbjct: 436 PNVMDLVKCDGAALCYQNQIMVLGSAPSEGEIKKIAAWLLECHDGSTGLSTDSLLEAGYP 495
Query: 489 GALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG-GKDGGRKMHPRSSFK 547
GA ALG+ VCG+AA+KI+SK F+FWFRSHTAKEIKW GAKH+ G D GR+MHPRSSF+
Sbjct: 496 GASALGEVVCGMAAIKISSKGFIFWFRSHTAKEIKWSGAKHEPGDADDNGRRMHPRSSFR 555
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDS--KMIVNVPSVDDR-IEKID 604
AFLEVVK RS+PWEDVEMDAIHSLQLILRGSLQDE A D+ + IV PS D R I+ +
Sbjct: 556 AFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANDNNVRSIVEAPSDDVRKIQGLL 615
Query: 605 ELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDS 664
ELRI+TNEMVRLIETA PILAVD G++NGWN K AE+TGL +AIG LVDLV GDS
Sbjct: 616 ELRIVTNEMVRLIETATAPILAVDIVGSINGWNGKVAEITGLPTTEAIGMLLVDLVEGDS 675
Query: 665 VDVVKNMLSSAF 676
V+V+K ML+SA
Sbjct: 676 VEVIKQMLNSAM 687
>gi|212722792|ref|NP_001131622.1| uncharacterized protein LOC100192976 [Zea mays]
gi|37926916|gb|AAP06791.1| phytochrome C2 apoprotein [Zea mays]
gi|413933056|gb|AFW67607.1| phytochromeC2 [Zea mays]
Length = 1135
Score = 1013 bits (2618), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 498/689 (72%), Positives = 566/689 (82%), Gaps = 11/689 (1%)
Query: 1 MSSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNISSSTSN 58
MSS S N+ SRSSSARSK +ARV AQT +DA+L DF+ S FDYS+SV ++ S
Sbjct: 1 MSSPSNNRGTCSRSSSARSKHSARVVAQTPVDAQLHADFEGSQRHFDYSSSVGAANRPS- 59
Query: 59 VPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
+STVS YLQ +QRGR IQPFGC++AV F +L YSENAPEMLDL PHAVP I+Q+D
Sbjct: 60 ASTSTVSTYLQNMQRGRYIQPFGCLLAVHPDTFALLAYSENAPEMLDLTPHAVPTIDQRD 119
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
ALT+G DVRTLF S + AL KAA FGEVNLLNPIL+H +TSGKPFYAILHRIDVGLVID
Sbjct: 120 ALTIGADVRTLFRSQSSVALHKAATFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVID 179
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
LEP NP DVPVTAAGALKSYKLAAKAISRLQSLPSGN+SLLCDVLV EVS+LTGYDRVM
Sbjct: 180 LEPFNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMA 239
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFHEDEHGEV++ECRR DLEPYLG HYPATDIPQASRFL MKNK+RMICD A PV +I
Sbjct: 240 YKFHEDEHGEVISECRRSDLEPYLGLHYPATDIPQASRFLFMKNKMRMICDFSATPVLII 299
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTIN----EAEDELDNDQEQG 354
QD L QP+SLCGSTLRA HGCHA+YM NMGS+ASLVMSVTIN E D + Q +G
Sbjct: 300 QDGSLAQPVSLCGSTLRASHGCHAQYMANMGSVASLVMSVTINDDEEEDGDTDSDQQPKG 359
Query: 355 RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCD 414
RKLWGLVVCHHTSPRFVPFPLRYACEFL+QVFG+Q++KEVEL+AQ +E+HILRTQT+LCD
Sbjct: 360 RKLWGLVVCHHTSPRFVPFPLRYACEFLLQVFGIQLSKEVELAAQAKERHILRTQTLLCD 419
Query: 415 MLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGS 474
MLLRD+ VGI TQ+PNVMDLVKCDGAALYY+ ++ +LG TP+E +IK IA WL E H GS
Sbjct: 420 MLLRDALVGIFTQSPNVMDLVKCDGAALYYQNQVLVLGSTPSESEIKSIATWLQENHDGS 479
Query: 475 TGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDS-GG 533
TGLSTDSLVEAGYPGA AL + VCG+ A+KI+SK+F+FWFRSHT KEIKW GAKH+
Sbjct: 480 TGLSTDSLVEAGYPGAAALREVVCGMVAIKISSKNFIFWFRSHTTKEIKWSGAKHEPFDA 539
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKM--IV 591
D GRKMHPRSSFKAFLEVVK RS+PWEDVEMDAIHSLQLILR SLQ E A + + IV
Sbjct: 540 DDNGRKMHPRSSFKAFLEVVKWRSVPWEDVEMDAIHSLQLILRDSLQGEDANRNNIRSIV 599
Query: 592 NVPSVD-DRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQ 650
PS D +++ + ELR +TNEMVRLIETA P+LAVD +GN+NGWN KAAELTGL V +
Sbjct: 600 KAPSDDMKKLQGLLELRTVTNEMVRLIETATAPVLAVDIAGNINGWNKKAAELTGLPVME 659
Query: 651 AIGTALVDLVAGDSVDVVKNMLSSAFLAI 679
AIG L+DLV DSV+VVK +L SA I
Sbjct: 660 AIGRPLIDLVVADSVEVVKQILDSALQGI 688
>gi|343408423|gb|AEM06737.1| phytochrome C [Arabidopsis thaliana]
gi|343408443|gb|AEM06747.1| phytochrome C [Arabidopsis thaliana]
Length = 1111
Score = 1000 bits (2586), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/673 (69%), Positives = 572/673 (84%), Gaps = 9/673 (1%)
Query: 9 TNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNIS--SSTSNVPSSTV 64
+N SRS S RS+QN+RV++Q +DAKL +F+ES+ FDYS S+N++ SS+ +PSS V
Sbjct: 3 SNTSRSYSTRSRQNSRVSSQVLVDAKLHGNFEESERLFDYSASINLNMPSSSCEIPSSAV 62
Query: 65 SAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGI 124
S YLQ++QRG LIQPFGC+I VDE+N V+ +SEN EML L PH VP++EQ++ALT+G
Sbjct: 63 STYLQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGT 122
Query: 125 DVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNP 184
DV++LF S G +ALQKA +FGE+++LNPI +HC++S KPFYAILHRI+ GLVIDLEPV+P
Sbjct: 123 DVKSLFLSPGCSALQKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSP 182
Query: 185 DDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHED 244
D+VPVTAAGAL+SYKLAAK+ISRLQ+LPSGN+ LLCD LV EVS+LTGYDRVMVYKFHED
Sbjct: 183 DEVPVTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHED 242
Query: 245 EHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLD 304
HGEV+AEC R D+EPYLG HY ATDIPQASRFL M+NKVRMICDC A PVKV+QDK L
Sbjct: 243 GHGEVIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLS 302
Query: 305 QPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE-DELDNDQEQGRKLWGLVVC 363
QP+SL GSTLRAPHGCHA+YM NMGS+ASLVMSVTIN ++ DE++ D + GR LWGLVVC
Sbjct: 303 QPISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVC 362
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HH SPRFVPFPLRYACEFL QVFGVQ+NKE E + L+EK IL+TQ+VLCDML R++P+G
Sbjct: 363 HHASPRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIG 422
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+PN+MDLVKCDGAALYYR KLW LGVTPTE QI+D+ +W+L+ H G+TG +T+SL+
Sbjct: 423 IVTQSPNIMDLVKCDGAALYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLM 482
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
E+GYP A LG+++CG+AAV IT KDFLFWFRS TAK+IKWGGA+HD +DG R MHPR
Sbjct: 483 ESGYPDASVLGESICGMAAVYITEKDFLFWFRSSTAKQIKWGGARHDPNDRDGKR-MHPR 541
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAF+E+V+ +S+PW+D+EMDAI+SLQLI++GSLQ+ E SK +V+VP VD+R++K+
Sbjct: 542 SSFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE---EHSKTVVDVPLVDNRVQKV 598
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGD 663
DEL +I NEMVRLI+TAAVPI AVDASG +NGWNSKAAE+TGL V+QAIG + DLV D
Sbjct: 599 DELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDD 658
Query: 664 SVDVVKNMLSSAF 676
SV+ VKNML+ A
Sbjct: 659 SVETVKNMLALAL 671
>gi|37623877|gb|AAQ95581.1| phytochrome c [Arabidopsis thaliana]
Length = 1111
Score = 1000 bits (2586), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/673 (68%), Positives = 573/673 (85%), Gaps = 9/673 (1%)
Query: 9 TNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNIS--SSTSNVPSSTV 64
+N SRS S RS+QN+RV++Q +DAKL +F+ES+ FDYS S+N++ SS+ +PSS V
Sbjct: 3 SNTSRSCSTRSRQNSRVSSQVLVDAKLHGNFEESERLFDYSASINLNMPSSSCEIPSSAV 62
Query: 65 SAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGI 124
S YLQ++QRG LIQPFGC+I VDE+N V+ +SEN EML L PH VP++EQ++ALT+G
Sbjct: 63 STYLQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGT 122
Query: 125 DVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNP 184
DV++LF S G +ALQKA +FGE+++LNPI +HC++S KPFYAILHRI+ GLVIDLEPV+P
Sbjct: 123 DVKSLFLSPGCSALQKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSP 182
Query: 185 DDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHED 244
D+VPVTAAGAL+SYKLAAK+ISRLQ+LPSGN+ LLCD LV EVS+LTGYDRVMVYKFHED
Sbjct: 183 DEVPVTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHED 242
Query: 245 EHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLD 304
HGEV+AEC R D+EPYLG HY ATDIPQASRFL M+NKVRMICDC A PVKV+QDK L
Sbjct: 243 GHGEVIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLS 302
Query: 305 QPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE-DELDNDQEQGRKLWGLVVC 363
QP+SL GSTLRAPHGCHA+YM NMGS+ASLVMSVTIN ++ DE++ D + GR LWGLVVC
Sbjct: 303 QPISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVC 362
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HH SPRFVPFPLRYACEFL QVFGVQ+NKE E + L+EK IL+TQ+VLCDML R++P+G
Sbjct: 363 HHASPRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIG 422
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+PN+MDLVKCDGAALYYR KLW LGVTPTE QI+D+ +W+L+ H G+TG +T+SL+
Sbjct: 423 IVTQSPNIMDLVKCDGAALYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLM 482
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
E+GYP A LG+++CG+AAV IT KDFLFWFRS TAK+IKWGGA+HD +D G++MHPR
Sbjct: 483 ESGYPDASVLGESICGMAAVYITEKDFLFWFRSSTAKQIKWGGARHDPNDRD-GKRMHPR 541
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAF+E+V+ +S+PW+D+EMDAI+SLQLI++GSLQ+ E SK +V+VP VD+R++K+
Sbjct: 542 SSFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE---EHSKTVVDVPLVDNRVQKV 598
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGD 663
DEL +I NEMVRLI+TAAVPI AVDASG +NGWNSKAAE+TGL V+QAIG + DLV D
Sbjct: 599 DELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDD 658
Query: 664 SVDVVKNMLSSAF 676
SV+ VKNML+ A
Sbjct: 659 SVETVKNMLALAL 671
>gi|343408417|gb|AEM06734.1| phytochrome C [Arabidopsis thaliana]
gi|343408419|gb|AEM06735.1| phytochrome C [Arabidopsis thaliana]
gi|343408425|gb|AEM06738.1| phytochrome C [Arabidopsis thaliana]
gi|343408429|gb|AEM06740.1| phytochrome C [Arabidopsis thaliana]
gi|343408431|gb|AEM06741.1| phytochrome C [Arabidopsis thaliana]
gi|343408435|gb|AEM06743.1| phytochrome C [Arabidopsis thaliana]
gi|343408437|gb|AEM06744.1| phytochrome C [Arabidopsis thaliana]
gi|343408445|gb|AEM06748.1| phytochrome C [Arabidopsis thaliana]
Length = 1111
Score = 1000 bits (2585), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/673 (69%), Positives = 572/673 (84%), Gaps = 9/673 (1%)
Query: 9 TNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNIS--SSTSNVPSSTV 64
+N SRS S RS+QN+RV++Q +DAKL +F+ES+ FDYS SVN++ SS+ +PSS V
Sbjct: 3 SNTSRSYSTRSRQNSRVSSQVLVDAKLHGNFEESERLFDYSASVNLNMPSSSCEIPSSAV 62
Query: 65 SAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGI 124
S YLQ++QRG LIQPFGC+I VDE+N V+ +SEN EML L PH VP++EQ++ALT+G
Sbjct: 63 STYLQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGT 122
Query: 125 DVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNP 184
DV++LF S G +ALQKA +FGE+++LNPI +HC++S KPFYAILHRI+ GLVIDLEPV+P
Sbjct: 123 DVKSLFLSPGCSALQKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSP 182
Query: 185 DDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHED 244
D+VPVTAAGAL+SYKLAAK+ISRLQ+LPSGN+ LLCD LV EVS+LTGYDRVMVYKFHED
Sbjct: 183 DEVPVTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHED 242
Query: 245 EHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLD 304
HGEV+AEC R D+EPYLG HY ATDIPQASRFL M+NKVRMICDC A PVKV+QDK L
Sbjct: 243 GHGEVIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLS 302
Query: 305 QPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE-DELDNDQEQGRKLWGLVVC 363
QP+SL GSTLRAPHGCHA+YM NMGS+ASLVMSVTIN ++ DE++ D + GR LWGLVVC
Sbjct: 303 QPISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVC 362
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HH SPRFVPFPLRYACEFL QVFGVQ+NKE E + L+EK IL+TQ+VLCDML R++P+G
Sbjct: 363 HHASPRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIG 422
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+PN+MDLVKCDGAALYYR KLW LGVTPTE QI+D+ +W+L+ H G+TG +T+SL+
Sbjct: 423 IVTQSPNIMDLVKCDGAALYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLM 482
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
E+GYP A LG+++CG+AAV IT KDFLFWFRS TAK+IKWGGA+HD +DG R MHPR
Sbjct: 483 ESGYPDASVLGESICGMAAVYITEKDFLFWFRSSTAKQIKWGGARHDPNDRDGKR-MHPR 541
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAF+E+V+ +S+PW+D+EMDAI+SLQLI++GSLQ+ E SK +V+VP VD+R++K+
Sbjct: 542 SSFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE---EHSKTVVDVPLVDNRVQKV 598
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGD 663
DEL +I NEMVRLI+TAAVPI AVDASG +NGWNSKAAE+TGL V+QAIG + DLV D
Sbjct: 599 DELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDD 658
Query: 664 SVDVVKNMLSSAF 676
SV+ VKNML+ A
Sbjct: 659 SVETVKNMLALAL 671
>gi|343408411|gb|AEM06731.1| phytochrome C [Arabidopsis thaliana]
Length = 1111
Score = 1000 bits (2585), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/673 (69%), Positives = 572/673 (84%), Gaps = 9/673 (1%)
Query: 9 TNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNIS--SSTSNVPSSTV 64
+N SRS S RS+QN+RV++Q +DAKL +F+ES+ FDYS S+N++ SS+ +PSS V
Sbjct: 3 SNTSRSYSTRSRQNSRVSSQVLVDAKLHGNFEESERLFDYSASINLNMPSSSCEIPSSAV 62
Query: 65 SAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGI 124
S YLQ++QRG LIQPFGC+I VDE+N V+ +SEN EML L PH VP++EQ++ALT+G
Sbjct: 63 STYLQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGT 122
Query: 125 DVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNP 184
DV++LF S G +ALQKA +FGE+++LNPI +HC++S KPFYAILHRI+ GLVIDLEPV+P
Sbjct: 123 DVKSLFLSPGCSALQKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSP 182
Query: 185 DDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHED 244
D+VPVTAAGAL+SYKLAAK+ISRLQ+LPSGN+ LLCD LV EVS+LTGYDRVMVYKFHED
Sbjct: 183 DEVPVTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHED 242
Query: 245 EHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLD 304
HGEV+AEC R D+EPYLG HY ATDIPQASRFL M+NKVRMICDC A PVKV+QDK L
Sbjct: 243 GHGEVIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLS 302
Query: 305 QPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE-DELDNDQEQGRKLWGLVVC 363
QP+SL GSTLRAPHGCHA+YM NMGS+ASLVMSVTIN ++ DE++ D + GR LWGLVVC
Sbjct: 303 QPISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVC 362
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HH SPRFVPFPLRYACEFL QVFGVQ+NKE E + L+EK IL+TQ+VLCDML R++P+G
Sbjct: 363 HHASPRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIG 422
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+PN+MDLVKCDGAALYYR KLW LGVTPTE QI+D+ +W+L+ H G+TG +T+SL+
Sbjct: 423 IVTQSPNIMDLVKCDGAALYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLM 482
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
E+GYP A LG+++CG+AAV IT KDFLFWFRS TAK+IKWGGA+HD +DG R MHPR
Sbjct: 483 ESGYPDASVLGESICGMAAVYITEKDFLFWFRSSTAKQIKWGGARHDPNDRDGKR-MHPR 541
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAF+E+V+ +S+PW+D+EMDAI+SLQLI++GSLQ+ E SK +V+VP VD+R++K+
Sbjct: 542 SSFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE---EHSKTVVDVPLVDNRVQKV 598
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGD 663
DEL +I NEMVRLI+TAAVPI AVDASG +NGWNSKAAE+TGL V+QAIG + DLV D
Sbjct: 599 DELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDD 658
Query: 664 SVDVVKNMLSSAF 676
SV+ VKNML+ A
Sbjct: 659 SVETVKNMLALAL 671
>gi|108802823|gb|ABG21362.1| PHYTOCHROME C [Arabidopsis thaliana]
Length = 1054
Score = 999 bits (2584), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/673 (68%), Positives = 573/673 (85%), Gaps = 9/673 (1%)
Query: 9 TNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNIS--SSTSNVPSSTV 64
+N SRS S RS+QN+RV++Q +DAKL +F+ES+ FDYS S+N++ SS+ +PSS V
Sbjct: 3 SNTSRSYSTRSRQNSRVSSQVLVDAKLHGNFEESERLFDYSASINLNMPSSSCEIPSSAV 62
Query: 65 SAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGI 124
S YLQ++QRG LIQPFGC+I VDE+N V+ +SEN EML L PH VP++EQ++ALT+G
Sbjct: 63 STYLQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGT 122
Query: 125 DVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNP 184
DV++LF S G +ALQKA +FGE+++LNPI +HC++S KPFYAILHRI+ GLVIDLEPV+P
Sbjct: 123 DVKSLFLSPGCSALQKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSP 182
Query: 185 DDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHED 244
D+VPVTAAGAL+SYKLAAK+ISRLQ+LPSGN+ LLCD LV EVS+LTGYDRVMVYKFHED
Sbjct: 183 DEVPVTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHED 242
Query: 245 EHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLD 304
HGEV+AEC R D+EPYLG HY ATDIPQASRFL M+NKVRMICDC A PVKV+QDK L
Sbjct: 243 GHGEVIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLS 302
Query: 305 QPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE-DELDNDQEQGRKLWGLVVC 363
QP+SL GSTLRAPHGCHA+YM NMGS+ASLVMSVTIN ++ DE++ D + GR LWGLVVC
Sbjct: 303 QPISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVC 362
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HH SPRFVPFPLRYACEFL QVFGVQ+NKE E + L+EK IL+TQ+VLCDML R++P+G
Sbjct: 363 HHASPRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIG 422
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+PN+MDLVKCDGAALYYR KLW LGVTPTE QI+D+ +W+L+ H G+TG +T+SL+
Sbjct: 423 IVTQSPNIMDLVKCDGAALYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLM 482
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
E+GYP A LG+++CG+AAV IT KDFLFWFRS TAK+IKWGGA+HD +D G++MHPR
Sbjct: 483 ESGYPDASVLGESICGMAAVYITEKDFLFWFRSSTAKQIKWGGARHDPNDRD-GKRMHPR 541
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAF+E+V+ +S+PW+D+EMDAI+SLQLI++GSLQ+ E SK +V+VP VD+R++K+
Sbjct: 542 SSFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE---EHSKTVVDVPLVDNRVQKV 598
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGD 663
DEL +I NEMVRLI+TAAVPI AVDASG +NGWNSKAAE+TGL V+QAIG + DLV D
Sbjct: 599 DELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDD 658
Query: 664 SVDVVKNMLSSAF 676
SV+ VKNML+ A
Sbjct: 659 SVETVKNMLALAL 671
>gi|108802772|gb|ABG21337.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802777|gb|ABG21339.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802779|gb|ABG21340.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802785|gb|ABG21343.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802787|gb|ABG21344.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802789|gb|ABG21345.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802791|gb|ABG21346.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802801|gb|ABG21351.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802813|gb|ABG21357.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802817|gb|ABG21359.1| PHYTOCHROME C [Arabidopsis thaliana]
Length = 1054
Score = 999 bits (2583), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/673 (69%), Positives = 573/673 (85%), Gaps = 9/673 (1%)
Query: 9 TNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNIS--SSTSNVPSSTV 64
+N SRS S RS+QN+RV++Q +DAKL +F+ES+ FDYS SVN++ SS+ +PSS V
Sbjct: 3 SNTSRSYSTRSRQNSRVSSQVLVDAKLHGNFEESERLFDYSASVNLNMPSSSCEIPSSAV 62
Query: 65 SAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGI 124
S YLQ++QRG LIQPFGC+I VDE+N V+ +SEN EML L PH VP++EQ++ALT+G
Sbjct: 63 STYLQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGT 122
Query: 125 DVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNP 184
DV++LF S G +ALQKA +FGE+++LNPI +HC++S KPFYAILHRI+ GLVIDLEPV+P
Sbjct: 123 DVKSLFLSPGCSALQKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSP 182
Query: 185 DDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHED 244
D+VPVTAAGAL+SYKLAAK+ISRLQ+LPSGN+ LLCD LV EVS+LTGYDRVMVYKFHED
Sbjct: 183 DEVPVTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHED 242
Query: 245 EHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLD 304
HGEV+AEC R D+EPYLG HY ATDIPQASRFL M+NKVRMICDC A PVKV+QDK L
Sbjct: 243 GHGEVIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLS 302
Query: 305 QPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE-DELDNDQEQGRKLWGLVVC 363
QP+SL GSTLRAPHGCHA+YM NMGS+ASLVMSVTIN ++ DE++ D + GR LWGLVVC
Sbjct: 303 QPISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVC 362
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HH SPRFVPFPLRYACEFL QVFGVQ+NKE E + L+EK IL+TQ+VLCDML R++P+G
Sbjct: 363 HHASPRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIG 422
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+PN+MDLVKCDGAALYYR KLW LGVTPTE QI+D+ +W+L+ H G+TG +T+SL+
Sbjct: 423 IVTQSPNIMDLVKCDGAALYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLM 482
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
E+GYP A LG+++CG+AAV IT KDFLFWFRS TAK+IKWGGA+HD +D G++MHPR
Sbjct: 483 ESGYPDASVLGESICGMAAVYITEKDFLFWFRSSTAKQIKWGGARHDPNDRD-GKRMHPR 541
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAF+E+V+ +S+PW+D+EMDAI+SLQLI++GSLQ+ E SK +V+VP VD+R++K+
Sbjct: 542 SSFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE---EHSKTVVDVPLVDNRVQKV 598
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGD 663
DEL +I NEMVRLI+TAAVPI AVDASG +NGWNSKAAE+TGL V+QAIG + DLV D
Sbjct: 599 DELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDD 658
Query: 664 SVDVVKNMLSSAF 676
SV+ VKNML+ A
Sbjct: 659 SVETVKNMLALAL 671
>gi|108802811|gb|ABG21356.1| PHYTOCHROME C [Arabidopsis thaliana]
Length = 1054
Score = 999 bits (2582), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/673 (69%), Positives = 573/673 (85%), Gaps = 9/673 (1%)
Query: 9 TNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNIS--SSTSNVPSSTV 64
+N SRS S RS+QN+RV++Q +DAKL +F+ES+ FDYS SVN++ SS+ +PSS V
Sbjct: 3 SNTSRSYSTRSRQNSRVSSQVLVDAKLHGNFEESERLFDYSASVNLNMPSSSCEIPSSAV 62
Query: 65 SAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGI 124
S YLQ++QRG LIQPFGC+I VDE+N V+ +SEN EML L PH VP++EQ++ALT+G
Sbjct: 63 STYLQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGT 122
Query: 125 DVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNP 184
DV++LF S G +ALQKA +FGE+++LNPI +HC++S KPFYAILHRI+ GLVIDLEPV+P
Sbjct: 123 DVKSLFLSPGCSALQKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSP 182
Query: 185 DDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHED 244
D+VPVTAAGAL+SYKLAAK+ISRLQ+LPSGN+ LLCD LV EVS+LTGYDRVMVYKFHED
Sbjct: 183 DEVPVTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHED 242
Query: 245 EHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLD 304
HGEV+AEC R D+EPYLG HY ATDIPQASRFL M+NKVRMICDC A PVKV+QDK L
Sbjct: 243 GHGEVIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLS 302
Query: 305 QPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE-DELDNDQEQGRKLWGLVVC 363
QP+SL GSTLRAPHGCHA+YM NMGS+ASLVMSVTIN ++ DE++ D + GR LWGLVVC
Sbjct: 303 QPISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVC 362
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HH SPRFVPFPLRYACEFL QVFGVQ+NKE E + L+EK IL+TQ+VLCDML R++P+G
Sbjct: 363 HHASPRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIG 422
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+PN+MDLVKCDGAALYYR KLW LGVTPTE QI+D+ +W+L+ H G+TG +T+SL+
Sbjct: 423 IVTQSPNIMDLVKCDGAALYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLM 482
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
E+GYP A LG+++CG+AAV IT KDFLFWFRS TAK+IKWGGA+HD +D G++MHPR
Sbjct: 483 ESGYPDASVLGESICGMAAVYITEKDFLFWFRSSTAKQIKWGGARHDPNDRD-GKRMHPR 541
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAF+E+V+ +S+PW+D+EMDAI+SLQLI++GSLQ+ E SK +V+VP VD+R++K+
Sbjct: 542 SSFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE---EHSKTVVDVPLVDNRVQKV 598
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGD 663
DEL +I NEMVRLI+TAAVPI AVDASG +NGWNSKAAE+TGL V+QAIG + DLV D
Sbjct: 599 DELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDD 658
Query: 664 SVDVVKNMLSSAF 676
SV+ VKNML+ A
Sbjct: 659 SVETVKNMLALAL 671
>gi|343408413|gb|AEM06732.1| phytochrome C [Arabidopsis thaliana]
Length = 1111
Score = 999 bits (2582), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/673 (69%), Positives = 572/673 (84%), Gaps = 9/673 (1%)
Query: 9 TNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNIS--SSTSNVPSSTV 64
+N SRS S RS+QN+RV++Q +DAKL +F+ES+ FDYS SVN++ SS+ +PSS V
Sbjct: 3 SNTSRSYSTRSRQNSRVSSQVLVDAKLHGNFEESERLFDYSASVNLNMPSSSCEIPSSAV 62
Query: 65 SAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGI 124
S YLQ++QRG LIQPFGC+I VDE+N V+ +SEN EML L PH VP++EQ++ALT+G
Sbjct: 63 STYLQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGT 122
Query: 125 DVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNP 184
DV++LF S G +ALQKA +FGE+++LNPI +HC++S KPFYAILHRI+ GLVIDLEPV+P
Sbjct: 123 DVKSLFLSPGCSALQKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSP 182
Query: 185 DDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHED 244
D+VPVTAAGAL+SYKLAAK+ISRLQ+LPSGN+ LLCD LV EVS+LTGYDRVMVYKFHED
Sbjct: 183 DEVPVTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHED 242
Query: 245 EHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLD 304
HGEV+AEC R D+EPYLG HY ATDIPQASRFL M+NKVRMICDC A PVKV+QDK L
Sbjct: 243 GHGEVIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLS 302
Query: 305 QPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE-DELDNDQEQGRKLWGLVVC 363
QP+SL GSTLRAPHGCHA+YM NMGS+ASLVMSVTIN ++ DE++ D + GR LWGLVVC
Sbjct: 303 QPISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVC 362
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HH SPRFVPFPLRYACEFL QVFGVQ+NKE E + L+EK IL+TQ+VLCDML R++P+G
Sbjct: 363 HHASPRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIG 422
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+PN+MDLVKCDGAALYYR KLW LGVTPTE QI+D+ +W+L+ H G+TG +T+SL+
Sbjct: 423 IVTQSPNIMDLVKCDGAALYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLM 482
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
E+GYP A LG+++CG+AAV IT KDFLFWFRS TAK+IKWGGA+HD +DG R MHPR
Sbjct: 483 ESGYPDASVLGESICGMAAVYITEKDFLFWFRSSTAKQIKWGGARHDPIDRDGKR-MHPR 541
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAF+E+V+ +S+PW+D+EMDAI+SLQLI++GSLQ+ E SK +V+VP VD+R++K+
Sbjct: 542 SSFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE---EHSKTVVDVPLVDNRVQKV 598
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGD 663
DEL +I NEMVRLI+TAAVPI AVDASG +NGWNSKAAE+TGL V+QAIG + DLV D
Sbjct: 599 DELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDD 658
Query: 664 SVDVVKNMLSSAF 676
SV+ VKNML+ A
Sbjct: 659 SVETVKNMLALAL 671
>gi|343408439|gb|AEM06745.1| phytochrome C [Arabidopsis thaliana]
Length = 1111
Score = 999 bits (2582), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/673 (69%), Positives = 572/673 (84%), Gaps = 9/673 (1%)
Query: 9 TNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNIS--SSTSNVPSSTV 64
+N SRS S RS+QN+RV++Q +DAKL +F+ES+ FDYS S+N++ SS+ +PSS V
Sbjct: 3 SNTSRSYSTRSRQNSRVSSQVLVDAKLHGNFEESERLFDYSASINLNMPSSSCEIPSSAV 62
Query: 65 SAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGI 124
S YLQ++QRG LIQPFGC+I VDE+N V+ +SEN EML L PH VP++EQ++ALT+G
Sbjct: 63 STYLQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGT 122
Query: 125 DVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNP 184
DV++LF S G +ALQKA +FGE+++LNPI +HC++S KPFYAILHRI+ GLVIDLEPV+P
Sbjct: 123 DVKSLFLSPGCSALQKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSP 182
Query: 185 DDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHED 244
D+VPVTAAGAL+SYKLAAK+ISRLQ+LPSGN+ LLCD LV EVS+LTGYDRVMVYKFHED
Sbjct: 183 DEVPVTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHED 242
Query: 245 EHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLD 304
HGEV+AEC R D+EPYLG HY ATDIPQASRFL M+NKVRMICDC A PVKV+QDK L
Sbjct: 243 GHGEVIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLS 302
Query: 305 QPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE-DELDNDQEQGRKLWGLVVC 363
QP+SL GSTLRAPHGCHA+YM NMGS+ASLVMSVTIN ++ DE++ D + GR LWGLVVC
Sbjct: 303 QPISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVC 362
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HH SPRFVPFPLRYACEFL QVFGVQ+NKE E + L+EK IL+TQ+VLCDML R++P+G
Sbjct: 363 HHASPRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIG 422
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+PN+MDLVKCDGAALYYR KLW LGVTPTE QI+D+ +W+L+ H G+TG +T+SL+
Sbjct: 423 IVTQSPNIMDLVKCDGAALYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLM 482
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
E+GYP A LG+++CG+AAV IT KDFLFWFRS TAK+IKWGGA+HD +DG R MHPR
Sbjct: 483 ESGYPDASVLGESICGMAAVYITEKDFLFWFRSSTAKQIKWGGARHDPNDRDGKR-MHPR 541
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAF+E+V+ +S+PW+D+EMDAI+SLQLI++GSLQ+ E SK +V+VP VD+R++K+
Sbjct: 542 SSFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE---EHSKTVVDVPLVDNRVQKV 598
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGD 663
DEL +I NEMVRLI+TAAVPI AVDASG +NGWNSKAAE+TGL V+QAIG + DLV D
Sbjct: 599 DELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDD 658
Query: 664 SVDVVKNMLSSAF 676
SV+ VKNML+ A
Sbjct: 659 SVETVKNMLALAL 671
>gi|108802783|gb|ABG21342.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802815|gb|ABG21358.1| PHYTOCHROME C [Arabidopsis thaliana]
Length = 1054
Score = 999 bits (2582), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/673 (68%), Positives = 573/673 (85%), Gaps = 9/673 (1%)
Query: 9 TNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNIS--SSTSNVPSSTV 64
+N SRS S RS+QN+RV++Q +DAKL +F+ES+ FDYS S+N++ SS+ +PSS V
Sbjct: 3 SNTSRSYSTRSRQNSRVSSQVLVDAKLHGNFEESERLFDYSASINLNMPSSSCEIPSSAV 62
Query: 65 SAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGI 124
S YLQ++QRG LIQPFGC+I VDE+N V+ +SEN EML L PH VP++EQ++ALT+G
Sbjct: 63 STYLQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGT 122
Query: 125 DVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNP 184
DV++LF S G +ALQKA +FGE+++LNPI +HC++S KPFYAILHRI+ GLVIDLEPV+P
Sbjct: 123 DVKSLFLSPGCSALQKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSP 182
Query: 185 DDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHED 244
D+VPVTAAGAL+SYKLAAK+ISRLQ+LPSGN+ LLCD LV EVS+LTGYDRVMVYKFHED
Sbjct: 183 DEVPVTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHED 242
Query: 245 EHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLD 304
HGEV+AEC R D+EPYLG HY ATDIPQASRFL M+NKVRMICDC A PVKV+QDK L
Sbjct: 243 GHGEVIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLS 302
Query: 305 QPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE-DELDNDQEQGRKLWGLVVC 363
QP+SL GSTLRAPHGCHA+YM NMGS+ASLVMSVTIN ++ DE++ D + GR LWGLVVC
Sbjct: 303 QPISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVC 362
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HH SPRFVPFPLRYACEFL QVFGVQ+NKE E + L+EK IL+TQ+VLCDML R++P+G
Sbjct: 363 HHASPRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIG 422
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+PN+MDLVKCDGAALYYR KLW LGVTPTE QI+D+ +W+L+ H G+TG +T+SL+
Sbjct: 423 IVTQSPNIMDLVKCDGAALYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLM 482
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
E+GYP A LG+++CG+AAV IT KDFLFWFRS TAK+IKWGGA+HD +D G++MHPR
Sbjct: 483 ESGYPDASVLGESICGMAAVYITEKDFLFWFRSSTAKQIKWGGARHDPNDRD-GKRMHPR 541
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAF+E+V+ +S+PW+D+EMDAI+SLQLI++GSLQ+ E SK +V+VP VD+R++K+
Sbjct: 542 SSFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE---EHSKTVVDVPLVDNRVQKV 598
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGD 663
DEL +I NEMVRLI+TAAVPI AVDASG +NGWNSKAAE+TGL V+QAIG + DLV D
Sbjct: 599 DELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDD 658
Query: 664 SVDVVKNMLSSAF 676
SV+ VKNML+ A
Sbjct: 659 SVETVKNMLALAL 671
>gi|108802821|gb|ABG21361.1| PHYTOCHROME C [Arabidopsis thaliana]
Length = 1054
Score = 998 bits (2580), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/673 (69%), Positives = 573/673 (85%), Gaps = 9/673 (1%)
Query: 9 TNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNIS--SSTSNVPSSTV 64
+N SRS S RS+QN+RV++Q +DAKL +F+ES+ FDYS SVN++ SS+ +PSS V
Sbjct: 3 SNTSRSYSTRSRQNSRVSSQVLVDAKLHGNFEESERLFDYSASVNLNMPSSSCEIPSSAV 62
Query: 65 SAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGI 124
S YLQ++QRG LIQPFGC+I VDE+N V+ +SEN EML L PH VP++EQ++ALT+G
Sbjct: 63 STYLQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGT 122
Query: 125 DVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNP 184
DV++LF S G +ALQKA +FGE+++LNPI +HC++S KPFYAILHRI+ GLVIDLEPV+P
Sbjct: 123 DVKSLFLSPGCSALQKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSP 182
Query: 185 DDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHED 244
D+VPVTAAGAL+SYKLAAK+ISRLQ+LPSGN+ LLCD LV EVS+LTGYDRVMVYKFHED
Sbjct: 183 DEVPVTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHED 242
Query: 245 EHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLD 304
HGEV+AEC R D+EPYLG HY ATDIPQASRFL M+NKVRMICDC A PVKV+QDK L
Sbjct: 243 GHGEVIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLS 302
Query: 305 QPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE-DELDNDQEQGRKLWGLVVC 363
QP+SL GSTLRAPHGCHA+YM NMGS+ASLVMSVTIN ++ DE++ D + GR LWGLVVC
Sbjct: 303 QPISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVC 362
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HH SPRFVPFPLRYACEFL QVFGVQ+NKE E + L+EK IL+TQ+VLCDML R++P+G
Sbjct: 363 HHASPRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIG 422
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+PN+MDLVKCDGAALYYR KLW LGVTPTE QI+D+ +W+L+ H G+TG +T+SL+
Sbjct: 423 IVTQSPNIMDLVKCDGAALYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLM 482
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
E+GYP A LG+++CG+AAV IT KDFLFWFRS TAK+IKWGGA+HD +D G++MHPR
Sbjct: 483 ESGYPDASVLGESICGMAAVYITEKDFLFWFRSSTAKQIKWGGARHDPIDRD-GKRMHPR 541
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAF+E+V+ +S+PW+D+EMDAI+SLQLI++GSLQ+ E SK +V+VP VD+R++K+
Sbjct: 542 SSFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE---EHSKTVVDVPLVDNRVQKV 598
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGD 663
DEL +I NEMVRLI+TAAVPI AVDASG +NGWNSKAAE+TGL V+QAIG + DLV D
Sbjct: 599 DELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDD 658
Query: 664 SVDVVKNMLSSAF 676
SV+ VKNML+ A
Sbjct: 659 SVETVKNMLALAL 671
>gi|576939|emb|CAA83549.1| phyC [Arabidopsis thaliana]
gi|343408441|gb|AEM06746.1| phytochrome C [Arabidopsis thaliana]
gi|385654208|gb|AFI61904.1| phytochrome C [Arabidopsis thaliana]
Length = 1111
Score = 998 bits (2579), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/673 (68%), Positives = 571/673 (84%), Gaps = 9/673 (1%)
Query: 9 TNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNIS--SSTSNVPSSTV 64
+N SRS S RS+QN+RV++Q +DAKL +F+ES+ FDYS S+N++ SS+ +PSS V
Sbjct: 3 SNTSRSYSTRSRQNSRVSSQVLVDAKLHGNFEESERLFDYSASINLNMPSSSCEIPSSAV 62
Query: 65 SAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGI 124
S YLQ++QRG LIQPFGC+I VDE+N V+ +SEN EML L PH VP++EQ++ALT+G
Sbjct: 63 STYLQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGT 122
Query: 125 DVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNP 184
DV++LF S G +ALQKA +FGE+++LNPI +HC++S KPFYAILHRI+ GLVIDLEPV+P
Sbjct: 123 DVKSLFLSPGCSALQKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSP 182
Query: 185 DDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHED 244
D+VPVTAAGAL+SYKLAAK+ISRLQ+LPSGN+ LLCD LV EVS+LT YDRVMVYKFHED
Sbjct: 183 DEVPVTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTSYDRVMVYKFHED 242
Query: 245 EHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLD 304
HGEV+AEC R D+EPYLG HY ATDIPQASRFL M+NKVRMICDC A PVKV+QDK L
Sbjct: 243 GHGEVIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLS 302
Query: 305 QPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE-DELDNDQEQGRKLWGLVVC 363
QP+SL GSTLRAPHGCHA+YM NMGS+ASLVMSVTIN ++ DE++ D + GR LWGLVVC
Sbjct: 303 QPISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVC 362
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HH SPRFVPFPLRYACEFL QVFGVQ+NKE E + L+EK IL+TQ+VLCDML R++P+G
Sbjct: 363 HHASPRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIG 422
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+PN+MDLVKCDGAALYYR KLW LGVTPTE QI+D+ +W+L+ H G+TG +T+SL+
Sbjct: 423 IVTQSPNIMDLVKCDGAALYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLM 482
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
E+GYP A LG+++CG+AAV IT KDFLFWFRS TAK+IKWGGA+HD +DG R MHPR
Sbjct: 483 ESGYPDASVLGESICGMAAVYITEKDFLFWFRSSTAKQIKWGGARHDPNDRDGKR-MHPR 541
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAF+E+V+ +S+PW+D+EMDAI+SLQLI++GSLQ+ E SK +V+VP VD+R++K+
Sbjct: 542 SSFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE---EHSKTVVDVPLVDNRVQKV 598
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGD 663
DEL +I NEMVRLI+TAAVPI AVDASG +NGWNSKAAE+TGL V+QAIG + DLV D
Sbjct: 599 DELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDD 658
Query: 664 SVDVVKNMLSSAF 676
SV+ VKNML+ A
Sbjct: 659 SVETVKNMLALAL 671
>gi|343408421|gb|AEM06736.1| phytochrome C [Arabidopsis thaliana]
Length = 1111
Score = 997 bits (2578), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/673 (68%), Positives = 571/673 (84%), Gaps = 9/673 (1%)
Query: 9 TNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNIS--SSTSNVPSSTV 64
+N SRS S RS+QN+RV++Q +DAKL +F+ES+ FDYS S+N++ SS+ +PSS V
Sbjct: 3 SNTSRSYSTRSRQNSRVSSQVLVDAKLHGNFEESERLFDYSASINLNMPSSSCEIPSSAV 62
Query: 65 SAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGI 124
S YLQ++QRG LIQPFGC+I VDE+N V+ +SEN EML L PH VP++EQ++ALT+G
Sbjct: 63 STYLQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGT 122
Query: 125 DVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNP 184
DV++LF S G +ALQKA +FGE+++LNPI +HC++S KPFYAILHRI+ GLVIDLEPV+P
Sbjct: 123 DVKSLFLSPGCSALQKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSP 182
Query: 185 DDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHED 244
D+VPVTAAGAL+SYKLAAK+ISRLQ+LPSGN+ LLCD LV EVS+LT YDRVMVYKFHED
Sbjct: 183 DEVPVTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTSYDRVMVYKFHED 242
Query: 245 EHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLD 304
HGEV+AEC R D+EPYLG HY ATDIPQASRFL M+NKVRMICDC A PVKV+QDK L
Sbjct: 243 GHGEVIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLS 302
Query: 305 QPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE-DELDNDQEQGRKLWGLVVC 363
QP+SL GSTLRAPHGCHA+YM NMGS+ASLVMSVTIN ++ DE++ D + GR LWGLVVC
Sbjct: 303 QPISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVC 362
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HH SPRFVPFPLRYACEFL QVFGVQ+NKE E + L+EK IL+TQ+VLCDML R++P+G
Sbjct: 363 HHGSPRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIG 422
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+PN+MDLVKCDGAALYYR KLW LGVTPTE QI+D+ +W+L+ H G+TG +T+SL+
Sbjct: 423 IVTQSPNIMDLVKCDGAALYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLM 482
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
E+GYP A LG+++CG+AAV IT KDFLFWFRS TAK+IKWGGA+HD +DG R MHPR
Sbjct: 483 ESGYPDASVLGESICGMAAVYITEKDFLFWFRSSTAKQIKWGGARHDPNDRDGKR-MHPR 541
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAF+E+V+ +S+PW+D+EMDAI+SLQLI++GSLQ+ E SK +V+VP VD+R++K+
Sbjct: 542 SSFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE---EHSKTVVDVPLVDNRVQKV 598
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGD 663
DEL +I NEMVRLI+TAAVPI AVDASG +NGWNSKAAE+TGL V+QAIG + DLV D
Sbjct: 599 DELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDD 658
Query: 664 SVDVVKNMLSSAF 676
SV+ VKNML+ A
Sbjct: 659 SVETVKNMLALAL 671
>gi|108802766|gb|ABG21334.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802768|gb|ABG21335.1| PHYTOCHROME C [Arabidopsis thaliana]
Length = 1054
Score = 997 bits (2577), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/673 (68%), Positives = 573/673 (85%), Gaps = 9/673 (1%)
Query: 9 TNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNIS--SSTSNVPSSTV 64
+N SRS S RS+QN+RV++Q +DAKL +F+ES+ FDYS S+N++ SS+ +PSS V
Sbjct: 3 SNTSRSYSTRSRQNSRVSSQVLVDAKLHGNFEESERLFDYSASINLNMPSSSCEIPSSAV 62
Query: 65 SAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGI 124
S YLQ++QRG LIQPFGC++ VDE+N V+ +SEN EML L PH VP++EQ++ALT+G
Sbjct: 63 STYLQKIQRGMLIQPFGCLVVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGT 122
Query: 125 DVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNP 184
DV++LF S G +ALQKA +FGE+++LNPI +HC++S KPFYAILHRI+ GLVIDLEPV+P
Sbjct: 123 DVKSLFLSPGCSALQKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSP 182
Query: 185 DDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHED 244
D+VPVTAAGAL+SYKLAAK+ISRLQ+LPSGN+ LLCD LV EVS+LTGYDRVMVYKFHED
Sbjct: 183 DEVPVTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHED 242
Query: 245 EHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLD 304
HGEV++EC R D+EPYLG HY ATDIPQASRFL M+NKVRMICDC A PVKV+QDK L
Sbjct: 243 GHGEVISECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLS 302
Query: 305 QPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE-DELDNDQEQGRKLWGLVVC 363
QP+SL GSTLRAPHGCHA+YM NMGS+ASLVMSVTIN ++ DE++ D + GR LWGLVVC
Sbjct: 303 QPISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVC 362
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HH SPRFVPFPLRYACEFL QVFGVQ+NKE E + L+EK IL+TQ+VLCDML R++P+G
Sbjct: 363 HHASPRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIG 422
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+PN+MDLVKCDGAALYYR KLW LGVTPTE QI+D+ +W+L+ H G+TG +T+SL+
Sbjct: 423 IVTQSPNIMDLVKCDGAALYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLM 482
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
E+GYP A LG+++CG+AAV IT KDFLFWFRS TAK+IKWGGA+HD +D G++MHPR
Sbjct: 483 ESGYPDASVLGESICGMAAVYITEKDFLFWFRSSTAKQIKWGGARHDPNDRD-GKRMHPR 541
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAF+E+V+ +S+PW+D+EMDAI+SLQLI++GSLQ+ E SK +V+VP VD+R++K+
Sbjct: 542 SSFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE---EHSKTVVDVPLVDNRVQKV 598
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGD 663
DEL +I NEMVRLI+TAAVPI AVDASG +NGWNSKAAE+TGL V+QAIG + DLV D
Sbjct: 599 DELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDD 658
Query: 664 SVDVVKNMLSSAF 676
SV+ VKNML+ A
Sbjct: 659 SVETVKNMLALAL 671
>gi|108802770|gb|ABG21336.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802775|gb|ABG21338.1| PHYTOCHROME C [Arabidopsis thaliana]
Length = 1054
Score = 997 bits (2577), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/673 (68%), Positives = 572/673 (84%), Gaps = 9/673 (1%)
Query: 9 TNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNIS--SSTSNVPSSTV 64
+N SRS S RS+QN+RV++Q +DAKL +F+ES+ FDYS S+N++ SS+ +PSS V
Sbjct: 3 SNTSRSYSTRSRQNSRVSSQVLVDAKLHGNFEESERLFDYSASINLNMPSSSCEIPSSAV 62
Query: 65 SAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGI 124
S YLQ++QRG LIQPFGC+I VDE+N V+ +SEN EML L PH VP++EQ++ALT+G
Sbjct: 63 STYLQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGT 122
Query: 125 DVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNP 184
DV++LF S G +ALQKA +FGE+++LNPI +HC++S KPFYAILHRI+ GLVIDLEPV+P
Sbjct: 123 DVKSLFLSPGCSALQKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSP 182
Query: 185 DDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHED 244
D+VPVTAAGAL+SYKLAAK+ISRLQ+LPSGN+ LLCD LV EVS+LT YDRVMVYKFHED
Sbjct: 183 DEVPVTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTSYDRVMVYKFHED 242
Query: 245 EHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLD 304
HGEV+AEC R D+EPYLG HY ATDIPQASRFL M+NKVRMICDC A PVKV+QDK L
Sbjct: 243 GHGEVIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLS 302
Query: 305 QPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE-DELDNDQEQGRKLWGLVVC 363
QP+SL GSTLRAPHGCHA+YM NMGS+ASLVMSVTIN ++ DE++ D + GR LWGLVVC
Sbjct: 303 QPISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVC 362
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HH SPRFVPFPLRYACEFL QVFGVQ+NKE E + L+EK IL+TQ+VLCDML R++P+G
Sbjct: 363 HHASPRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIG 422
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+PN+MDLVKCDGAALYYR KLW LGVTPTE QI+D+ +W+L+ H G+TG +T+SL+
Sbjct: 423 IVTQSPNIMDLVKCDGAALYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLM 482
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
E+GYP A LG+++CG+AAV IT KDFLFWFRS TAK+IKWGGA+HD +D G++MHPR
Sbjct: 483 ESGYPDASVLGESICGMAAVYITEKDFLFWFRSSTAKQIKWGGARHDPNDRD-GKRMHPR 541
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAF+E+V+ +S+PW+D+EMDAI+SLQLI++GSLQ+ E SK +V+VP VD+R++K+
Sbjct: 542 SSFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE---EHSKTVVDVPLVDNRVQKV 598
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGD 663
DEL +I NEMVRLI+TAAVPI AVDASG +NGWNSKAAE+TGL V+QAIG + DLV D
Sbjct: 599 DELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDD 658
Query: 664 SVDVVKNMLSSAF 676
SV+ VKNML+ A
Sbjct: 659 SVETVKNMLALAL 671
>gi|108802781|gb|ABG21341.1| PHYTOCHROME C [Arabidopsis thaliana]
Length = 1054
Score = 996 bits (2574), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/673 (68%), Positives = 572/673 (84%), Gaps = 9/673 (1%)
Query: 9 TNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNIS--SSTSNVPSSTV 64
+N SRS S RS+QN+RV++Q +DAKL +F+ES+ FDYS S+N++ SS+ +PSS V
Sbjct: 3 SNTSRSYSTRSRQNSRVSSQVLVDAKLHGNFEESERLFDYSASINLNMPSSSCEIPSSAV 62
Query: 65 SAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGI 124
S YLQ++QRG LIQ FGC+I VDE+N V+ +SEN EML L PH VP++EQ++ALT+G
Sbjct: 63 STYLQKIQRGMLIQTFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGT 122
Query: 125 DVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNP 184
DV++LF S G +ALQKA +FGE+++LNPI +HC++S KPFYAILHRI+ GLVIDLEPV+P
Sbjct: 123 DVKSLFLSPGCSALQKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSP 182
Query: 185 DDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHED 244
D+VPVTAAGAL+SYKLAAK+ISRLQ+LPSGN+ LLCD LV EVS+LTGYDRVMVYKFHED
Sbjct: 183 DEVPVTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHED 242
Query: 245 EHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLD 304
HGEV+AEC R D+EPYLG HY ATDIPQASRFL M+NKVRMICDC A PVKV+QDK L
Sbjct: 243 GHGEVIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLS 302
Query: 305 QPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE-DELDNDQEQGRKLWGLVVC 363
QP+SL GSTLRAPHGCHA+YM NMGS+ASLVMSVTIN ++ DE++ D + GR LWGLVVC
Sbjct: 303 QPISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVC 362
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HH SPRFVPFPLRYACEFL QVFGVQ+NKE E + L+EK IL+TQ+VLCDML R++P+G
Sbjct: 363 HHASPRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIG 422
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+PN+MDLVKCDGAALYYR KLW LGVTPTE QI+D+ +W+L+ H G+TG +T+SL+
Sbjct: 423 IVTQSPNIMDLVKCDGAALYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLM 482
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
E+GYP A LG+++CG+AAV IT KDFLFWFRS TAK+IKWGGA+HD +D G++MHPR
Sbjct: 483 ESGYPDASVLGESICGMAAVYITEKDFLFWFRSSTAKQIKWGGARHDPNDRD-GKRMHPR 541
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAF+E+V+ +S+PW+D+EMDAI+SLQLI++GSLQ+ E SK +V+VP VD+R++K+
Sbjct: 542 SSFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE---EHSKTVVDVPLVDNRVQKV 598
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGD 663
DEL +I NEMVRLI+TAAVPI AVDASG +NGWNSKAAE+TGL V+QAIG + DLV D
Sbjct: 599 DELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDD 658
Query: 664 SVDVVKNMLSSAF 676
SV+ VKNML+ A
Sbjct: 659 SVETVKNMLALAL 671
>gi|343408433|gb|AEM06742.1| phytochrome C [Arabidopsis thaliana]
Length = 1111
Score = 996 bits (2574), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/673 (69%), Positives = 571/673 (84%), Gaps = 9/673 (1%)
Query: 9 TNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNIS--SSTSNVPSSTV 64
+N SRS S RS+QN+RV++Q +DAKL +F+ES+ FDYS SVN++ SS+ +PSS V
Sbjct: 3 SNTSRSYSTRSRQNSRVSSQVLVDAKLHGNFEESERLFDYSASVNLNMPSSSCEIPSSAV 62
Query: 65 SAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGI 124
S YLQ++QRG LIQPFGC+I VDE+N V+ +SEN EML L PH VP++EQ++ALT+G
Sbjct: 63 STYLQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGT 122
Query: 125 DVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNP 184
DV++LF S G +ALQKA +FGE+++LNPI +HC++S KPFYAILHRI+ GLVIDLEPV+P
Sbjct: 123 DVKSLFLSPGCSALQKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSP 182
Query: 185 DDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHED 244
D+VPVTAAGAL+SYKLAAK+ISRLQ+LPSGN+ LLCD LV EVS+LTGYDRVMVYKFHED
Sbjct: 183 DEVPVTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHED 242
Query: 245 EHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLD 304
HGEV+AEC R D+EPYLG HY ATDIPQASRFL M+NKVRMICDC A PVKV+QDK L
Sbjct: 243 GHGEVIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLS 302
Query: 305 QPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE-DELDNDQEQGRKLWGLVVC 363
QP+SL GSTLRAPHGCHA+YM NMGS+ASLVMSVTIN ++ DE++ D + GR LWGLVVC
Sbjct: 303 QPISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVC 362
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HH S RFVPFPLRYACEFL QVFGVQ+NKE E + L+EK IL+TQ+VLCDML R++P+G
Sbjct: 363 HHASLRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIG 422
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+PN+MDLVKCDGAALYYR KLW LGVTPTE QI+D+ +W+L+ H G+TG +T+SL+
Sbjct: 423 IVTQSPNIMDLVKCDGAALYYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLM 482
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
E+GYP A LG+++CG+AAV IT KDFLFWFRS TAK+IKWGGA+HD +DG R MHPR
Sbjct: 483 ESGYPDASVLGESICGMAAVYITEKDFLFWFRSSTAKQIKWGGARHDPNDRDGKR-MHPR 541
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAF+E+V+ +S+PW+D+EMDAI+SLQLI++GSLQ+ E SK +V+VP VD+R++K+
Sbjct: 542 SSFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE---EHSKTVVDVPLVDNRVQKV 598
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGD 663
DEL +I NEMVRLI+TAAVPI AVDASG +NGWNSKAAE+TGL V+QAIG + DLV D
Sbjct: 599 DELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDD 658
Query: 664 SVDVVKNMLSSAF 676
SV+ VKNML+ A
Sbjct: 659 SVETVKNMLALAL 671
>gi|15239211|ref|NP_198433.1| phytochrome C [Arabidopsis thaliana]
gi|130192|sp|P14714.1|PHYC_ARATH RecName: Full=Phytochrome C
gi|16425|emb|CAA35223.1| unnamed protein product [Arabidopsis thaliana]
gi|10176703|dbj|BAB09925.1| phytochrome C [Arabidopsis thaliana]
gi|332006638|gb|AED94021.1| phytochrome C [Arabidopsis thaliana]
gi|343408415|gb|AEM06733.1| phytochrome C [Arabidopsis thaliana]
gi|343408427|gb|AEM06739.1| phytochrome C [Arabidopsis thaliana]
Length = 1111
Score = 995 bits (2572), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/673 (68%), Positives = 572/673 (84%), Gaps = 9/673 (1%)
Query: 9 TNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNIS--SSTSNVPSSTV 64
+N SRS S RS+QN+RV++Q +DAKL +F+ES+ FDYS S+N++ SS+ +PSS V
Sbjct: 3 SNTSRSCSTRSRQNSRVSSQVLVDAKLHGNFEESERLFDYSASINLNMPSSSCEIPSSAV 62
Query: 65 SAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGI 124
S YLQ++QRG LIQPFGC+I VDE+N V+ +SEN EML L PH VP++EQ++ALT+G
Sbjct: 63 STYLQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGT 122
Query: 125 DVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNP 184
DV++LF S G +AL+KA +FGE+++LNPI +HC++S KPFYAILHRI+ GLVIDLEPV+P
Sbjct: 123 DVKSLFLSPGCSALEKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSP 182
Query: 185 DDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHED 244
D+VPVTAAGAL+SYKLAAK+ISRLQ+LPSGN+ LLCD LV EVS+LTGYDRVMVYKFHED
Sbjct: 183 DEVPVTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHED 242
Query: 245 EHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLD 304
HGEV+AEC R D+EPYLG HY ATDIPQASRFL M+NKVRMICDC A PVKV+QDK L
Sbjct: 243 GHGEVIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLS 302
Query: 305 QPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE-DELDNDQEQGRKLWGLVVC 363
QP+SL GSTLRAPHGCHA+YM NMGS+ASLVMSVTIN ++ DE++ D + GR LWGLVVC
Sbjct: 303 QPISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVC 362
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HH SPRFVPFPLRYACEFL QVFGVQ+NKE E + L+EK IL+TQ+VLCDML R++P+G
Sbjct: 363 HHASPRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIG 422
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+PN+MDLVKCDGAALYYR LW LGVTPTE QI+D+ +W+L+ H G+TG +T+SL+
Sbjct: 423 IVTQSPNIMDLVKCDGAALYYRDNLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLM 482
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
E+GYP A LG+++CG+AAV I+ KDFLFWFRS TAK+IKWGGA+HD +D G++MHPR
Sbjct: 483 ESGYPDASVLGESICGMAAVYISEKDFLFWFRSSTAKQIKWGGARHDPNDRD-GKRMHPR 541
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAF+E+V+ +S+PW+D+EMDAI+SLQLI++GSLQ+ E SK +V+VP VD+R++K+
Sbjct: 542 SSFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE---EHSKTVVDVPLVDNRVQKV 598
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGD 663
DEL +I NEMVRLI+TAAVPI AVDASG +NGWNSKAAE+TGL V+QAIG + DLV D
Sbjct: 599 DELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDD 658
Query: 664 SVDVVKNMLSSAF 676
SV+ VKNML+ A
Sbjct: 659 SVETVKNMLALAL 671
>gi|108802797|gb|ABG21349.1| PHYTOCHROME C [Arabidopsis thaliana]
Length = 1054
Score = 994 bits (2571), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/673 (68%), Positives = 572/673 (84%), Gaps = 9/673 (1%)
Query: 9 TNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNIS--SSTSNVPSSTV 64
+N SRS S RS+QN+RV++Q +DAKL +F+ES+ FDYS S+N++ SS+ +PSS V
Sbjct: 3 SNTSRSCSTRSRQNSRVSSQVLVDAKLHGNFEESERLFDYSASINLNMPSSSCEIPSSAV 62
Query: 65 SAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGI 124
S YLQ++QRG LIQPFGC+I VDE+N V+ +SEN EML L PH VP++EQ++ALT+G
Sbjct: 63 STYLQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGT 122
Query: 125 DVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNP 184
DV++LF S G +AL+KA +FGE+++LNPI +HC++S KPFYAILHRI+ GLVIDLEPV+P
Sbjct: 123 DVKSLFLSPGCSALEKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSP 182
Query: 185 DDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHED 244
D+VPVTAAGAL+SYKLAAK+ISRLQ+LPSGN+ LLCD LV EVS+LTGYDRVMVYKFHED
Sbjct: 183 DEVPVTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHED 242
Query: 245 EHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLD 304
HGEV+AEC R D+EPYLG HY ATDIPQASRFL M+NKVRMICDC A PVKV+QDK L
Sbjct: 243 GHGEVIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLS 302
Query: 305 QPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE-DELDNDQEQGRKLWGLVVC 363
QP+SL GSTLRAPHGCHA+YM NMGS+ASLVMSVTIN ++ DE++ D + GR LWGLVVC
Sbjct: 303 QPISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVC 362
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HH SPRFVPFPLRYACEFL QVFGVQ+NKE E + L+EK IL+TQ+VLCDML R++P+G
Sbjct: 363 HHASPRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIG 422
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+PN+MDLVKCDGAALYYR LW LGVTPTE QI+D+ +W+L+ H G+TG +T+SL+
Sbjct: 423 IVTQSPNIMDLVKCDGAALYYRDNLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLM 482
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
E+GYP A LG+++CG+AAV I+ KDFLFWFRS TAK+IKWGGA+HD +D G++MHPR
Sbjct: 483 ESGYPDASVLGESICGMAAVYISEKDFLFWFRSSTAKQIKWGGARHDPNDRD-GKRMHPR 541
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAF+E+V+ +S+PW+D+EMDAI+SLQLI++GSLQ+ E SK +V+VP VD+R++K+
Sbjct: 542 SSFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE---EHSKTVVDVPLVDNRVQKV 598
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGD 663
DEL +I NEMVRLI+TAAVPI AVDASG +NGWNSKAAE+TGL V+QAIG + DLV D
Sbjct: 599 DELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDD 658
Query: 664 SVDVVKNMLSSAF 676
SV+ VKNML+ A
Sbjct: 659 SVETVKNMLALAL 671
>gi|108802807|gb|ABG21354.1| PHYTOCHROME C [Arabidopsis thaliana]
Length = 1054
Score = 994 bits (2571), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/673 (68%), Positives = 572/673 (84%), Gaps = 9/673 (1%)
Query: 9 TNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNIS--SSTSNVPSSTV 64
+N SRS S RS+QN+RV++Q +DAKL +F+ES+ FDYS S+N++ SS+ +PSS V
Sbjct: 3 SNTSRSCSTRSRQNSRVSSQVLVDAKLHGNFEESERLFDYSASINLNMPSSSCEIPSSAV 62
Query: 65 SAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGI 124
S YLQ++QRG LIQPFGC+I VDE+N V+ +SEN EML L PH VP++EQ++ALT+G
Sbjct: 63 STYLQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGT 122
Query: 125 DVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNP 184
DV++LF S G +AL+KA +FGE+++LNPI +HC++S KPFYAILHRI+ GLVIDLEPV+P
Sbjct: 123 DVKSLFLSPGCSALEKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSP 182
Query: 185 DDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHED 244
D+VPVTAAGAL+SYKLAAK+ISRLQ+LPSGN+ LLCD LV EVS+LTGYDRVMVYKFHED
Sbjct: 183 DEVPVTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHED 242
Query: 245 EHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLD 304
HGEV+AEC R D+EPYLG HY ATDIPQASRFL M+NKVRMICDC A PVKV+QDK L
Sbjct: 243 GHGEVIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLS 302
Query: 305 QPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE-DELDNDQEQGRKLWGLVVC 363
QP+SL GSTLRAPHGCHA+YM NMGS+ASLVMSVTIN ++ DE++ D + GR LWGLVVC
Sbjct: 303 QPISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVC 362
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HH SPRFVPFPLRYACEFL QVFGVQ+NKE E + L+EK IL+TQ+VLCDML R++P+G
Sbjct: 363 HHASPRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIG 422
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+PN+MDLVKCDGAALYYR LW LGVTPTE QI+D+ +W+L+ H G+TG +T+SL+
Sbjct: 423 IVTQSPNIMDLVKCDGAALYYRDNLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLM 482
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
E+GYP A LG+++CG+AAV I+ KDFLFWFRS TAK+IKWGGA+HD +D G++MHPR
Sbjct: 483 ESGYPDASVLGESICGMAAVYISEKDFLFWFRSSTAKQIKWGGARHDPNDRD-GKRMHPR 541
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAF+E+V+ +S+PW+D+EMDAI+SLQLI++GSLQ+ E SK +V+VP VD+R++K+
Sbjct: 542 SSFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE---EHSKTVVDVPLVDNRVQKV 598
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGD 663
DEL +I NEMVRLI+TAAVPI AVDASG +NGWNSKAAE+TGL V+QAIG + DLV D
Sbjct: 599 DELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDD 658
Query: 664 SVDVVKNMLSSAF 676
SV+ VKNML+ A
Sbjct: 659 SVETVKNMLALAL 671
>gi|108802793|gb|ABG21347.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802795|gb|ABG21348.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802799|gb|ABG21350.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802803|gb|ABG21352.1| PHYTOCHROME C [Arabidopsis thaliana]
gi|108802805|gb|ABG21353.1| PHYTOCHROME C [Arabidopsis thaliana]
Length = 1054
Score = 994 bits (2570), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/673 (68%), Positives = 572/673 (84%), Gaps = 9/673 (1%)
Query: 9 TNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNIS--SSTSNVPSSTV 64
+N SRS S RS+QN+RV++Q +DAKL +F+ES+ FDYS S+N++ SS+ +PSS V
Sbjct: 3 SNTSRSCSTRSRQNSRVSSQVLVDAKLHGNFEESERLFDYSASINLNMPSSSCEIPSSAV 62
Query: 65 SAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGI 124
S YLQ++QRG LIQPFGC+I VDE+N V+ +SEN EML L PH VP++EQ++ALT+G
Sbjct: 63 STYLQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGT 122
Query: 125 DVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNP 184
DV++LF S G +AL+KA +FGE+++LNPI +HC++S KPFYAILHRI+ GLVIDLEPV+P
Sbjct: 123 DVKSLFLSPGCSALEKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSP 182
Query: 185 DDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHED 244
D+VPVTAAGAL+SYKLAAK+ISRLQ+LPSGN+ LLCD LV EVS+LTGYDRVMVYKFHED
Sbjct: 183 DEVPVTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHED 242
Query: 245 EHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLD 304
HGEV+AEC R D+EPYLG HY ATDIPQASRFL M+NKVRMICDC A PVKV+QDK L
Sbjct: 243 GHGEVIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLS 302
Query: 305 QPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE-DELDNDQEQGRKLWGLVVC 363
QP+SL GSTLRAPHGCHA+YM NMGS+ASLVMSVTIN ++ DE++ D + GR LWGLVVC
Sbjct: 303 QPISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVC 362
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HH SPRFVPFPLRYACEFL QVFGVQ+NKE E + L+EK IL+TQ+VLCDML R++P+G
Sbjct: 363 HHASPRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIG 422
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+PN+MDLVKCDGAALYYR LW LGVTPTE QI+D+ +W+L+ H G+TG +T+SL+
Sbjct: 423 IVTQSPNIMDLVKCDGAALYYRDNLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLM 482
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
E+GYP A LG+++CG+AAV I+ KDFLFWFRS TAK+IKWGGA+HD +D G++MHPR
Sbjct: 483 ESGYPDASVLGESICGMAAVYISEKDFLFWFRSSTAKQIKWGGARHDPNDRD-GKRMHPR 541
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAF+E+V+ +S+PW+D+EMDAI+SLQLI++GSLQ+ E SK +V+VP VD+R++K+
Sbjct: 542 SSFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE---EHSKTVVDVPLVDNRVQKV 598
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGD 663
DEL +I NEMVRLI+TAAVPI AVDASG +NGWNSKAAE+TGL V+QAIG + DLV D
Sbjct: 599 DELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDD 658
Query: 664 SVDVVKNMLSSAF 676
SV+ VKNML+ A
Sbjct: 659 SVETVKNMLALAL 671
>gi|108802809|gb|ABG21355.1| PHYTOCHROME C [Arabidopsis thaliana]
Length = 1054
Score = 993 bits (2566), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/673 (68%), Positives = 572/673 (84%), Gaps = 9/673 (1%)
Query: 9 TNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNIS--SSTSNVPSSTV 64
+N SRS S RS+QN+RV++Q +DAKL +F+ES+ FDYS S+N++ SS+ +PSS V
Sbjct: 3 SNTSRSCSTRSRQNSRVSSQVLVDAKLHGNFEESERLFDYSASINLNMPSSSCEIPSSAV 62
Query: 65 SAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGI 124
S YLQ++QRG LIQPFGC+I VDE+N V+ +SEN EML L PH VP++EQ++ALT+G
Sbjct: 63 STYLQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALTIGT 122
Query: 125 DVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNP 184
DV++LF S G +AL+KA +FGE+++LNPI +HC++S KPFYAILHRI+ GLVIDLEPV+P
Sbjct: 123 DVKSLFLSPGCSALEKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSP 182
Query: 185 DDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHED 244
D+VPVTAAGAL+SYKLAAK+ISRLQ+LPSGN+ LLCD LV EVS+LTGYDRVMVYKFHED
Sbjct: 183 DEVPVTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHED 242
Query: 245 EHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLD 304
HGEV+AEC R D+EPYLG HY ATDIPQASRFL M+NKVRMICDC A PVKV+QDK L
Sbjct: 243 GHGEVIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLS 302
Query: 305 QPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE-DELDNDQEQGRKLWGLVVC 363
QP+SL GSTLRAPHGCHA+YM NMGS+ASLVMSVTIN ++ DE++ D + GR LWGLVVC
Sbjct: 303 QPISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVC 362
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HH SPRFVPFPLRYACEFL QVFGV++NKE E + L+EK IL+TQ+VLCDML R++P+G
Sbjct: 363 HHASPRFVPFPLRYACEFLTQVFGVKINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIG 422
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+PN+MDLVKCDGAALYYR LW LGVTPTE QI+D+ +W+L+ H G+TG +T+SL+
Sbjct: 423 IVTQSPNIMDLVKCDGAALYYRDNLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLM 482
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
E+GYP A LG+++CG+AAV I+ KDFLFWFRS TAK+IKWGGA+HD +D G++MHPR
Sbjct: 483 ESGYPDASVLGESICGMAAVYISEKDFLFWFRSSTAKQIKWGGARHDPNDRD-GKRMHPR 541
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAF+E+V+ +S+PW+D+EMDAI+SLQLI++GSLQ+ E SK +V+VP VD+R++K+
Sbjct: 542 SSFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQE---EHSKTVVDVPLVDNRVQKV 598
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGD 663
DEL +I NEMVRLI+TAAVPI AVDASG +NGWNSKAAE+TGL V+QAIG + DLV D
Sbjct: 599 DELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDD 658
Query: 664 SVDVVKNMLSSAF 676
SV+ VKNML+ A
Sbjct: 659 SVETVKNMLALAL 671
>gi|242038093|ref|XP_002466441.1| hypothetical protein SORBIDRAFT_01g007850 [Sorghum bicolor]
gi|39980596|gb|AAR33018.1| phytochrome C [Sorghum bicolor]
gi|39980598|gb|AAR33019.1| phytochrome C [Sorghum bicolor]
gi|39980600|gb|AAR33020.1| phytochrome C [Sorghum bicolor]
gi|39980622|gb|AAR33031.1| phytochrome C [Sorghum bicolor subsp. x drummondii]
gi|241920295|gb|EER93439.1| hypothetical protein SORBIDRAFT_01g007850 [Sorghum bicolor]
Length = 1135
Score = 992 bits (2565), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/689 (73%), Positives = 576/689 (83%), Gaps = 11/689 (1%)
Query: 1 MSSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSN 58
MSS N+ SRSSSARS+ +ARV AQT +DA+L +F+ S +FDYS+SV+ + S
Sbjct: 1 MSSPLNNRGTCSRSSSARSRHSARVVAQTPVDAQLHAEFESSQRNFDYSSSVSAAIRPS- 59
Query: 59 VPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
V +STVS Y Q +QRG IQPFGC++AV FT+L YSENAPEMLDL PHAVP I+Q+D
Sbjct: 60 VSTSTVSTYHQTMQRGLYIQPFGCLLAVHPDTFTLLAYSENAPEMLDLTPHAVPTIDQRD 119
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
AL +G DVRTLF S + AL KAA FGEVNLLNPIL+H +TSGKPFYAILHRIDVGLVID
Sbjct: 120 ALAVGADVRTLFRSQSSVALHKAATFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVID 179
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
LEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGN+SLLCDVLV EVS+LTGYDRVM
Sbjct: 180 LEPVNPVDVPVTAAGALKSYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMA 239
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFHEDEHGEV++ECRR DLEPYLG HYPATDIPQASRFL MKNKVRMICDC A VK+I
Sbjct: 240 YKFHEDEHGEVISECRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCSATLVKII 299
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTI-NEAEDELD---NDQEQG 354
QD L QPLSLCGSTLRA HGCHA+YM NMGS+ASLVMSVTI N+ E+++D + Q +G
Sbjct: 300 QDDSLAQPLSLCGSTLRASHGCHAQYMANMGSVASLVMSVTISNDEEEDVDTGSDQQPKG 359
Query: 355 RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCD 414
RKLWGLVVCHHTSPRFVPFPLRYACEFL+QVFG+Q+NKEVEL+AQ +E+HILRTQT+LCD
Sbjct: 360 RKLWGLVVCHHTSPRFVPFPLRYACEFLLQVFGIQLNKEVELAAQAKERHILRTQTLLCD 419
Query: 415 MLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGS 474
MLLRD+PVGI TQ+PNVMDLVKCDGAALYY+ +L LLG TP+E +IK IA WL E H GS
Sbjct: 420 MLLRDAPVGIFTQSPNVMDLVKCDGAALYYQNQLLLLGSTPSESEIKSIATWLQENHDGS 479
Query: 475 TGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDS-GG 533
TGLSTDSLVEAGYPGA AL + VCG+AA+KI+SKDF+FWFRSHT KEIKWGGAKH+
Sbjct: 480 TGLSTDSLVEAGYPGAAALREVVCGMAAIKISSKDFIFWFRSHTTKEIKWGGAKHEPVDA 539
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVA--EDSKMIV 591
D GRKMHPRSSFKAFLEVVK RS+PWEDVEMDAIHSLQLILRGSLQDE A + + IV
Sbjct: 540 DDNGRKMHPRSSFKAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANRNNVRSIV 599
Query: 592 NVPSVD-DRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQ 650
P D +I+ + ELR +TNEMVRLIETA P+LAVD +GN+NGWN+KAAELTGL V +
Sbjct: 600 KAPPDDTKKIQGLLELRTVTNEMVRLIETATAPVLAVDIAGNINGWNNKAAELTGLPVME 659
Query: 651 AIGTALVDLVAGDSVDVVKNMLSSAFLAI 679
AIG L+DLV DS++VVK +L SA I
Sbjct: 660 AIGRPLIDLVVVDSIEVVKRILDSALQGI 688
>gi|39980612|gb|AAR33026.1| phytochrome C [Sorghum bicolor subsp. verticilliflorum]
gi|39980614|gb|AAR33027.1| phytochrome C [Sorghum bicolor subsp. verticilliflorum]
gi|39980616|gb|AAR33028.1| phytochrome C [Sorghum bicolor subsp. verticilliflorum]
Length = 1135
Score = 991 bits (2561), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/689 (73%), Positives = 576/689 (83%), Gaps = 11/689 (1%)
Query: 1 MSSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSN 58
MSS N+ SRSSSARS+ +ARV AQT +DA+L +F+ S +FDYS+SV+ + S
Sbjct: 1 MSSPLNNRGTCSRSSSARSRHSARVVAQTPVDAQLHAEFESSQRNFDYSSSVSAAIRPS- 59
Query: 59 VPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
V +STVS Y Q +QRG IQPFGC++AV FT+L YSENAPEMLDL PHAVP I+Q+D
Sbjct: 60 VSTSTVSTYHQTMQRGLYIQPFGCLLAVHPDTFTLLAYSENAPEMLDLTPHAVPTIDQRD 119
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
AL +G DVRTLF S + AL KAA FGEVNLLNPIL+H +TSGKPFYAILHRIDVGLVID
Sbjct: 120 ALAVGADVRTLFRSQSSVALHKAATFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVID 179
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
LEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGN+SLLCDVLV EVS+LTGYDRVM
Sbjct: 180 LEPVNPVDVPVTAAGALKSYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMA 239
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFHEDEHGEV++ECRR DLEPYLG HYPATDIPQASRFL MKNKVRMICDC A VK+I
Sbjct: 240 YKFHEDEHGEVISECRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCSATLVKII 299
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTI-NEAEDELD---NDQEQG 354
QD L QPLSLCGSTLRA HGCHA+YM NMGS+ASLVMSVTI N+ E+++D + Q +G
Sbjct: 300 QDDSLAQPLSLCGSTLRASHGCHAQYMANMGSVASLVMSVTISNDEEEDVDTGSDQQPKG 359
Query: 355 RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCD 414
RKLWGLVVCHHTSPRFVPFPLRYACEFL+QVFG+Q+NKEVEL+AQ +E+HILRTQT+LCD
Sbjct: 360 RKLWGLVVCHHTSPRFVPFPLRYACEFLLQVFGIQLNKEVELAAQAKERHILRTQTLLCD 419
Query: 415 MLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGS 474
MLLRD+PVGI TQ+PNVMDLVKCDGAALYY+ +L LLG TP+E +IK IA WL E H GS
Sbjct: 420 MLLRDAPVGIFTQSPNVMDLVKCDGAALYYQNQLLLLGSTPSESEIKSIATWLQENHDGS 479
Query: 475 TGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDS-GG 533
TGLSTDSLVEAGYPGA AL + VCG+AA+KI+SKDF+FWFRSHT KEIKWGGAKH+
Sbjct: 480 TGLSTDSLVEAGYPGAAALREVVCGMAAIKISSKDFIFWFRSHTTKEIKWGGAKHEPVDA 539
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVA--EDSKMIV 591
D GRKMHPRSSFKAFLEVVK RS+PWEDVEMDAIHSLQLILRGSLQDE A + + IV
Sbjct: 540 DDNGRKMHPRSSFKAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANRNNVRSIV 599
Query: 592 NVPSVD-DRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQ 650
P D +I+ + ELR +TNEMVRLIETA P+LAVD +GN+NGWN+KAAELTGL V +
Sbjct: 600 KAPPDDTKKIQGLLELRTVTNEMVRLIETATAPVLAVDIAGNINGWNNKAAELTGLPVME 659
Query: 651 AIGTALVDLVAGDSVDVVKNMLSSAFLAI 679
AIG L+DLV DS++VVK +L SA I
Sbjct: 660 AIGRPLIDLVVVDSIEVVKRILDSALQGI 688
>gi|39980618|gb|AAR33029.1| phytochrome C [Sorghum bicolor subsp. verticilliflorum]
Length = 1135
Score = 990 bits (2559), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/689 (73%), Positives = 576/689 (83%), Gaps = 11/689 (1%)
Query: 1 MSSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSN 58
MSS N+ SRSSSARS+ +ARV AQT +DA+L +F+ S +FDYS+SV+ + S
Sbjct: 1 MSSPLNNRGTCSRSSSARSRHSARVVAQTPVDAQLHAEFESSQRNFDYSSSVSAAIRPS- 59
Query: 59 VPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
V +STVS Y Q +QRG IQPFGC++AV FT+L YSENAPEMLDL PHAVP I+Q+D
Sbjct: 60 VSTSTVSTYHQTMQRGLYIQPFGCLLAVHPDTFTLLAYSENAPEMLDLTPHAVPTIDQRD 119
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
AL +G DVRTLF S + AL KAA FGEVNLLNPIL+H +TSGKPFYAILHRIDVGLVID
Sbjct: 120 ALAVGADVRTLFRSQSSVALHKAATFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVID 179
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
LEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGN+SLLCDVLV EVS+LTGYDRVM
Sbjct: 180 LEPVNPVDVPVTAAGALKSYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMA 239
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFHEDEHGEV++ECRR DLEPYLG HYPATDIPQASRFL MKNKVRMICDC A VK+I
Sbjct: 240 YKFHEDEHGEVISECRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCSATLVKII 299
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTI-NEAEDELD---NDQEQG 354
QD L QPLSLCGSTLRA HGCHA+YM NMGS+ASLVMSVTI N+ E+++D + Q +G
Sbjct: 300 QDDSLAQPLSLCGSTLRASHGCHAQYMANMGSVASLVMSVTISNDEEEDVDTGSDQQPKG 359
Query: 355 RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCD 414
RKLWGLVVCHHTSPRFVPFPLRYACEFL+QVFG+Q+NKEVEL+AQ +E+HILRTQT+LCD
Sbjct: 360 RKLWGLVVCHHTSPRFVPFPLRYACEFLLQVFGIQLNKEVELAAQAKERHILRTQTLLCD 419
Query: 415 MLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGS 474
MLLRD+PVGI TQ+PNVMDLVKCDGAALYY+ +L LLG TP+E +IK IA WL E H GS
Sbjct: 420 MLLRDAPVGIFTQSPNVMDLVKCDGAALYYQNQLLLLGSTPSESEIKSIATWLQENHDGS 479
Query: 475 TGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDS-GG 533
TGLSTDSLVEAGYPGA AL + VCG+AA+KI+SKDF+FWFRSHT KEIKWGGAKH+
Sbjct: 480 TGLSTDSLVEAGYPGAAALREVVCGMAAIKISSKDFIFWFRSHTTKEIKWGGAKHEPVDA 539
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVA--EDSKMIV 591
D GRKMHPRSSFKAFLEVVK RS+PWEDVE+DAIHSLQLILRGSLQDE A + + IV
Sbjct: 540 DDNGRKMHPRSSFKAFLEVVKWRSVPWEDVEIDAIHSLQLILRGSLQDEDANRNNVRSIV 599
Query: 592 NVPSVD-DRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQ 650
P D +I+ + ELR +TNEMVRLIETA P+LAVD +GN+NGWN+KAAELTGL V +
Sbjct: 600 KAPPDDTKKIQGLLELRTVTNEMVRLIETATAPVLAVDIAGNINGWNNKAAELTGLPVME 659
Query: 651 AIGTALVDLVAGDSVDVVKNMLSSAFLAI 679
AIG L+DLV DS++VVK +L SA I
Sbjct: 660 AIGRPLIDLVVVDSIEVVKRILDSALQGI 688
>gi|39980624|gb|AAR33032.1| phytochrome C [Sorghum propinquum]
Length = 1135
Score = 990 bits (2559), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/691 (73%), Positives = 575/691 (83%), Gaps = 15/691 (2%)
Query: 1 MSSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSN 58
MSS N+ SRSSSARS+ +ARV AQT +DA+L +F+ S +FDYS+SV+ + S
Sbjct: 1 MSSPLNNRGTCSRSSSARSRHSARVVAQTPVDAQLHAEFESSQRNFDYSSSVSAAIRPS- 59
Query: 59 VPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
V +STVS Y Q +QRG IQPFGC++AV FT+L YSENAPEMLDL PHAVP I+Q+D
Sbjct: 60 VSTSTVSTYHQTMQRGLYIQPFGCLLAVHPDTFTLLAYSENAPEMLDLTPHAVPTIDQRD 119
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
AL +G DVRTLF S + AL KAA FGEVNLLNPIL+H +TSGKPFYAILHRIDVGLVID
Sbjct: 120 ALAVGADVRTLFRSQSSVALHKAATFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVID 179
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
LEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGN+SLLCDVLV EVS+LTGYDRVM
Sbjct: 180 LEPVNPVDVPVTAAGALKSYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMA 239
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFHEDEHGEV++ECRR DLEPYLG HYPATDIPQASRFL MKNKVRMICDC A VK+I
Sbjct: 240 YKFHEDEHGEVISECRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCSATLVKII 299
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDND-----QEQ 353
QD L QPLSLCGSTLRA HGCHA+YM NMGS+ASLVMSVTI+ E+E D D Q +
Sbjct: 300 QDDSLAQPLSLCGSTLRASHGCHAQYMANMGSVASLVMSVTISNDEEE-DGDPGSDQQPK 358
Query: 354 GRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
GRKLWGLVVCHHTSPRFVPFPLRYACEFL+QVFG+Q+NKEVEL AQ +E+HILRTQT+LC
Sbjct: 359 GRKLWGLVVCHHTSPRFVPFPLRYACEFLLQVFGIQLNKEVELVAQAKERHILRTQTLLC 418
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+PVGI TQ+PNVMDLVKCDGAALYY+ +L LLG TP+E +IK IA WL E H G
Sbjct: 419 DMLLRDAPVGIFTQSPNVMDLVKCDGAALYYQNQLLLLGSTPSESEIKSIATWLQENHDG 478
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDS-G 532
STGLSTDSLVEAGYPGA AL + VCG+AA+KI+SKDF+FWFRSHT KEIKWGGAKH+
Sbjct: 479 STGLSTDSLVEAGYPGAAALREVVCGMAAIKISSKDFIFWFRSHTTKEIKWGGAKHEPVD 538
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVA--EDSKMI 590
D GRKMHPRSSFKAFLEVVK RS+PWEDVEMDAIHSLQLILRGSLQDE A + + I
Sbjct: 539 ADDNGRKMHPRSSFKAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANRNNVRSI 598
Query: 591 VNVPSVDD--RIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTV 648
V P +DD +I+ + ELR +TNEMVRLIETA P+LAVD +GN+NGWN+KAAELTGL V
Sbjct: 599 VKAP-LDDTKKIQGLLELRTVTNEMVRLIETATAPVLAVDIAGNINGWNNKAAELTGLPV 657
Query: 649 DQAIGTALVDLVAGDSVDVVKNMLSSAFLAI 679
+AIG LVDLV DS++VVK +L SA I
Sbjct: 658 MEAIGRPLVDLVVVDSIEVVKRILDSALQGI 688
>gi|39980620|gb|AAR33030.1| phytochrome C [Sorghum bicolor subsp. verticilliflorum]
Length = 1135
Score = 989 bits (2558), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/689 (73%), Positives = 575/689 (83%), Gaps = 11/689 (1%)
Query: 1 MSSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSN 58
MSS N+ SRSSSARS+ +ARV AQT +DA+L +F+ S +FDYS+SV+ + S
Sbjct: 1 MSSPLNNRGTCSRSSSARSRHSARVVAQTPVDAQLHAEFESSQRNFDYSSSVSAAIRPS- 59
Query: 59 VPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
V +STVS Y Q +QRG IQPFGC++AV FT+L YSENAPEMLDL PHAVP I+Q+D
Sbjct: 60 VSTSTVSTYHQTMQRGLYIQPFGCLLAVHPDTFTLLAYSENAPEMLDLTPHAVPTIDQRD 119
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
AL +G DVRTLF S + AL KAA FGEVNLLNPIL+H +TSGKPFYAILHRIDVGLVID
Sbjct: 120 ALAVGADVRTLFRSQSSVALHKAATFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVID 179
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
LEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGN+SLLCDVLV EVS+LTGYDRVM
Sbjct: 180 LEPVNPVDVPVTAAGALKSYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMA 239
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFHEDEHGEV++ECRR DLEPYLG HYPATDIPQASRFL MKNKVRMICDC A VK+I
Sbjct: 240 YKFHEDEHGEVISECRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCSATLVKII 299
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTI-NEAEDELD---NDQEQG 354
QD L QPLSLCGSTLRA HGCHA+YM NMGS+ASLVMSVTI N+ E+++D + Q +G
Sbjct: 300 QDDSLAQPLSLCGSTLRASHGCHAQYMANMGSVASLVMSVTISNDEEEDVDTGSDQQPKG 359
Query: 355 RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCD 414
RKLWGLVVCHHTSPRFVPFPLRYACEFL+QVFG+Q+NKEVEL+AQ +E+HILRTQT+LCD
Sbjct: 360 RKLWGLVVCHHTSPRFVPFPLRYACEFLLQVFGIQLNKEVELAAQAKERHILRTQTLLCD 419
Query: 415 MLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGS 474
MLLRD+PVGI TQ+PNV DLVKCDGAALYY+ +L LLG TP+E +IK IA WL E H GS
Sbjct: 420 MLLRDAPVGIFTQSPNVTDLVKCDGAALYYQNQLLLLGSTPSESEIKSIATWLQENHDGS 479
Query: 475 TGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDS-GG 533
TGLSTDSLVEAGYPGA AL + VCG+AA+KI+SKDF+FWFRSHT KEIKWGGAKH+
Sbjct: 480 TGLSTDSLVEAGYPGAAALREVVCGMAAIKISSKDFIFWFRSHTTKEIKWGGAKHEPVDA 539
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVA--EDSKMIV 591
D GRKMHPRSSFKAFLEVVK RS+PWEDVEMDAIHSLQLILRGSLQDE A + + IV
Sbjct: 540 DDNGRKMHPRSSFKAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANRNNVRSIV 599
Query: 592 NVPSVD-DRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQ 650
P D +I+ + ELR +TNEMVRLIETA P+LAVD +GN+NGWN+KAAELTGL V +
Sbjct: 600 KAPPDDTKKIQGLLELRTVTNEMVRLIETATAPVLAVDIAGNINGWNNKAAELTGLPVME 659
Query: 651 AIGTALVDLVAGDSVDVVKNMLSSAFLAI 679
AIG L+DLV DS++VVK +L SA I
Sbjct: 660 AIGRPLIDLVVVDSIEVVKRILDSALQGI 688
>gi|39980606|gb|AAR33023.1| phytochrome C [Sorghum bicolor subsp. verticilliflorum]
gi|39980608|gb|AAR33024.1| phytochrome C [Sorghum bicolor subsp. verticilliflorum]
gi|39980610|gb|AAR33025.1| phytochrome C [Sorghum bicolor subsp. verticilliflorum]
Length = 1135
Score = 989 bits (2556), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 504/689 (73%), Positives = 575/689 (83%), Gaps = 11/689 (1%)
Query: 1 MSSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSN 58
MSS N+ SRSSSARS+ +ARV AQT +DA+L +F+ S +FDYS+SV+ + S
Sbjct: 1 MSSPLNNRGTCSRSSSARSRHSARVVAQTPVDAQLHAEFESSQRNFDYSSSVSAAIRPS- 59
Query: 59 VPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
V +STVS Y Q +QRG IQPFGC++AV FT+L YSENAPEMLDL PHAVP I+Q+D
Sbjct: 60 VSTSTVSTYHQTMQRGLYIQPFGCLLAVHPDTFTLLAYSENAPEMLDLTPHAVPTIDQRD 119
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
AL +G DVRTLF S + AL KAA FGEVNLLNPIL+H +TSGKPFYAILHRIDVGLVID
Sbjct: 120 ALAVGADVRTLFRSQSSVALHKAATFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVID 179
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
LEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGN+SLLCDVLV EVS+LTGYDRVM
Sbjct: 180 LEPVNPVDVPVTAAGALKSYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMA 239
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFHEDEHGEV++ECRR DLEPYLG HYPATDIPQASRFL MKNKVRMICDC A VK+I
Sbjct: 240 YKFHEDEHGEVISECRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCSATLVKII 299
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTI-NEAEDELD---NDQEQG 354
QD L QPLSLCGSTLRA HGCHA+YM NMGS+ASLVMSVTI N+ E+++D + Q +G
Sbjct: 300 QDDSLAQPLSLCGSTLRASHGCHAQYMANMGSVASLVMSVTISNDEEEDVDTGSDQQPKG 359
Query: 355 RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCD 414
RKLWGLV+CHHTSPRFVPFPLRYACEFL+QVFG+Q+NKEVEL+AQ +E+HILRTQT+LCD
Sbjct: 360 RKLWGLVICHHTSPRFVPFPLRYACEFLLQVFGIQLNKEVELAAQAKERHILRTQTLLCD 419
Query: 415 MLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGS 474
MLLRD+PVGI TQ+PNV DLVKCDGAALYY+ +L LLG TP+E +IK IA WL E H GS
Sbjct: 420 MLLRDAPVGIFTQSPNVTDLVKCDGAALYYQNQLLLLGSTPSESEIKSIATWLQENHDGS 479
Query: 475 TGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDS-GG 533
TGLSTDSLVEAGYPGA AL + VCG+AA+KI+SKDF+FWFRSHT KEIKWGGAKH+
Sbjct: 480 TGLSTDSLVEAGYPGAAALREVVCGMAAIKISSKDFIFWFRSHTTKEIKWGGAKHEPVDA 539
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVA--EDSKMIV 591
D GRKMHPRSSFKAFLEVVK RS+PWEDVEMDAIHSLQLILRGSLQDE A + + IV
Sbjct: 540 DDNGRKMHPRSSFKAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANRNNVRSIV 599
Query: 592 NVPSVD-DRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQ 650
P D +I+ + ELR +TNEMVRLIETA P+LAVD +GN+NGWN+KAAELTGL V +
Sbjct: 600 KAPPDDTKKIQGLLELRTVTNEMVRLIETATAPVLAVDIAGNINGWNNKAAELTGLPVME 659
Query: 651 AIGTALVDLVAGDSVDVVKNMLSSAFLAI 679
AIG L+DLV DS++VVK +L SA I
Sbjct: 660 AIGRPLIDLVVVDSIEVVKRILDSALQGI 688
>gi|39980602|gb|AAR33021.1| phytochrome C [Sorghum bicolor]
gi|39980604|gb|AAR33022.1| phytochrome C [Sorghum bicolor]
Length = 1135
Score = 987 bits (2552), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 504/689 (73%), Positives = 574/689 (83%), Gaps = 11/689 (1%)
Query: 1 MSSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSN 58
MSS N+ SRSSSARS+ +ARV AQT +DA+L +F+ S +FDYS+SV+ + S
Sbjct: 1 MSSPLNNRGTCSRSSSARSRHSARVVAQTPVDAQLHAEFESSQRNFDYSSSVSAAIRPS- 59
Query: 59 VPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
V +STVS Y Q +QRG IQPFGC++AV FT+L YSENAPEMLDL PHAVP I+Q+D
Sbjct: 60 VSTSTVSTYHQTMQRGLYIQPFGCLLAVHPDTFTLLAYSENAPEMLDLTPHAVPTIDQRD 119
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
AL +G DVRTLF S + AL KAA FGEVNLLNPIL+H +TS KPFYAILHRIDVGLVID
Sbjct: 120 ALAVGADVRTLFRSQSSVALHKAATFGEVNLLNPILVHARTSRKPFYAILHRIDVGLVID 179
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
LEPVNP DVP TAAGALKSYKLAAKAISRLQSLPSGN+SLLCDVLV EVS+LTGYDRVM
Sbjct: 180 LEPVNPVDVPATAAGALKSYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMA 239
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFHEDEHGEV++ECRR DLEPYLG HYPATDIPQASRFL MKNKVRMICDC A VK+I
Sbjct: 240 YKFHEDEHGEVISECRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCSATLVKII 299
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTI-NEAEDELD---NDQEQG 354
QD L QPLSLCGSTLRA HGCHA+YM NMGS+ASLVMSVTI N+ E+++D + Q +G
Sbjct: 300 QDDSLAQPLSLCGSTLRASHGCHAQYMANMGSVASLVMSVTISNDEEEDVDTGSDQQPKG 359
Query: 355 RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCD 414
RKLWGLVVCHHTSPRFVPFPLRYACEFL+QVFG+Q+NKEVEL+AQ +E+HILRTQT+LCD
Sbjct: 360 RKLWGLVVCHHTSPRFVPFPLRYACEFLLQVFGIQLNKEVELAAQAKERHILRTQTLLCD 419
Query: 415 MLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGS 474
MLLRD+PVGI TQ+PNVMDLVKCDGAALYY+ +L LLG TP+E +IK IA WL E H GS
Sbjct: 420 MLLRDAPVGIFTQSPNVMDLVKCDGAALYYQNQLLLLGSTPSESEIKSIATWLQENHDGS 479
Query: 475 TGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDS-GG 533
TGLSTDSLVEAGYPGA AL + VCG+AA+KI+SKDF+FWFRSHT KEIKWGGAKH+
Sbjct: 480 TGLSTDSLVEAGYPGAAALREVVCGMAAIKISSKDFIFWFRSHTTKEIKWGGAKHEPVDA 539
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVA--EDSKMIV 591
D GRKMHPRSSFKAFLEVVK RS+PWEDVEMDAIHSLQLILRGSLQDE A + + IV
Sbjct: 540 DDNGRKMHPRSSFKAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANRNNVRSIV 599
Query: 592 NVPSVD-DRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQ 650
P D +I+ + ELR +TNEMVRLIETA P+LAVD +GN+NGWN+KAAELTGL V +
Sbjct: 600 KAPPDDTKKIQGLLELRTVTNEMVRLIETATAPVLAVDIAGNINGWNNKAAELTGLPVME 659
Query: 651 AIGTALVDLVAGDSVDVVKNMLSSAFLAI 679
AIG L+DLV DS++VVK +L SA I
Sbjct: 660 AIGRPLIDLVVVDSIEVVKRILDSALQGI 688
>gi|39980592|gb|AAR33016.1| phytochrome C [Sorghum bicolor]
gi|39980594|gb|AAR33017.1| phytochrome C [Sorghum bicolor]
Length = 1135
Score = 987 bits (2552), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/689 (73%), Positives = 575/689 (83%), Gaps = 11/689 (1%)
Query: 1 MSSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSN 58
MSS N+ SRSSSARS+ +ARV AQT +DA+L +F+ S +FDYS+SV+ + S
Sbjct: 1 MSSPLNNRGTCSRSSSARSRHSARVVAQTPVDAQLHAEFESSQRNFDYSSSVSAAIRPS- 59
Query: 59 VPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
V +STVS Y Q +QRG IQPFGC++AV FT+L YSENAPEMLDL PHAVP I+Q+D
Sbjct: 60 VSTSTVSTYHQTMQRGLYIQPFGCLLAVHPDTFTLLAYSENAPEMLDLTPHAVPTIDQRD 119
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
AL +G DVRTLF S + AL KAA FGEVNLLNPIL+H +TSGKPFYAILHRIDVGLVID
Sbjct: 120 ALAVGADVRTLFRSQSSVALHKAATFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVID 179
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
LEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGN+SLLCDVLV EVS+LTGYDRVM
Sbjct: 180 LEPVNPVDVPVTAAGALKSYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMA 239
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFHEDEHGEV++ECRR DLEPYLG HYPATDIPQASRFL MKNKVRMICDC A VK+I
Sbjct: 240 YKFHEDEHGEVISECRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCSATLVKII 299
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTI-NEAEDELD---NDQEQG 354
QD L QPLSLCGSTLRA HGCHA+YM NMGS+ASLVMSVTI N+ E+++D + Q +G
Sbjct: 300 QDDSLAQPLSLCGSTLRASHGCHAQYMANMGSVASLVMSVTISNDEEEDVDTGSDQQPKG 359
Query: 355 RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCD 414
RKLWGLVVCHHTSPRFVPFPLRYACEFL+QVFG+Q+NKEVEL+AQ +E+HILRTQT+L D
Sbjct: 360 RKLWGLVVCHHTSPRFVPFPLRYACEFLLQVFGIQLNKEVELAAQAKERHILRTQTLLWD 419
Query: 415 MLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGS 474
MLLRD+PVGI TQ+PNVMDLVKCDGAALYY+ +L LLG TP+E +IK IA WL E H GS
Sbjct: 420 MLLRDAPVGIFTQSPNVMDLVKCDGAALYYQNQLLLLGSTPSESEIKSIATWLQENHDGS 479
Query: 475 TGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDS-GG 533
TGLSTDSLVEAGYPGA AL + VCG+AA+KI+SKDF+FWFRSHT KEIKWGGAKH+
Sbjct: 480 TGLSTDSLVEAGYPGAAALREVVCGMAAIKISSKDFIFWFRSHTTKEIKWGGAKHEPVDA 539
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVA--EDSKMIV 591
D GRKMHPRSSFKAFLEVVK RS+PWEDVEMDAIHSLQLILRGSLQDE A + + IV
Sbjct: 540 DDNGRKMHPRSSFKAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANRNNVRSIV 599
Query: 592 NVPSVD-DRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQ 650
P D +I+ + ELR +TNEMVRLIETA P+LAVD +GN+NGWN+KAAELTGL V +
Sbjct: 600 KAPPDDTKKIQGLLELRTVTNEMVRLIETATAPVLAVDIAGNINGWNNKAAELTGLPVME 659
Query: 651 AIGTALVDLVAGDSVDVVKNMLSSAFLAI 679
AIG L+DLV DS++VVK +L SA I
Sbjct: 660 AIGRPLIDLVVVDSIEVVKRILDSALQGI 688
>gi|11134032|sp|P93528.1|PHYC_SORBI RecName: Full=Phytochrome C
gi|1800219|gb|AAB41399.1| phytochrome C [Sorghum bicolor]
Length = 1135
Score = 985 bits (2547), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 504/689 (73%), Positives = 574/689 (83%), Gaps = 11/689 (1%)
Query: 1 MSSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSN 58
MSS N+ SRSSSARS+ +ARV AQT +DA+L +F+ S +FDYS+SV+ + S
Sbjct: 1 MSSPLNNRGTCSRSSSARSRHSARVVAQTPVDAQLHAEFESSQRNFDYSSSVSAAIRPS- 59
Query: 59 VPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
V +STVS Y Q +QRG IQPFGC++AV FT+L YSENAPEMLDL PHAVP I+Q+D
Sbjct: 60 VSTSTVSTYHQTMQRGLYIQPFGCLLAVHPDTFTLLAYSENAPEMLDLTPHAVPTIDQRD 119
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
AL +G DVRTLF S + AL KAA FGEVNLLNPIL+H +TSGKPFYAILHRIDVGLVID
Sbjct: 120 ALAVGADVRTLFRSQSSVALHKAATFGEVNLLNPILVHARTSGKPFYAILHRIDVGLVID 179
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
LEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGN+SLLCDVLV EVS+LTGYDRVM
Sbjct: 180 LEPVNPVDVPVTAAGALKSYKLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVMA 239
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFHEDEHGEV++ECRR DLEPYLG HYPATDIPQASRFL MKNKVRMICDC A VK+I
Sbjct: 240 YKFHEDEHGEVISECRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCSATLVKII 299
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTI-NEAEDELD---NDQEQG 354
QD L QPLSLCGSTLRA HGCHA+YM NMGS+ASLVMSVTI N+ E+++D + Q +G
Sbjct: 300 QDDSLAQPLSLCGSTLRASHGCHAQYMANMGSVASLVMSVTISNDEEEDVDTGSDQQPKG 359
Query: 355 RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCD 414
RKLWGLVVCHHTSPRFVPFPLRYACEFL+QVFG+Q+NKEVEL+AQ +E+HILRTQT+L D
Sbjct: 360 RKLWGLVVCHHTSPRFVPFPLRYACEFLLQVFGIQLNKEVELAAQAKERHILRTQTLLWD 419
Query: 415 MLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGS 474
MLLRD+PVGI TQ+PNVMDLVKCDG ALYY+ +L LLG TP+E +IK IA WL E H GS
Sbjct: 420 MLLRDAPVGIFTQSPNVMDLVKCDGVALYYQNQLLLLGSTPSESEIKSIATWLQENHDGS 479
Query: 475 TGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDS-GG 533
TGLSTDSLVEAGYPGA AL + VCG+AA+KI+SKDF+FWFRSHT KEIKWGGAKH+
Sbjct: 480 TGLSTDSLVEAGYPGAAALREVVCGMAAIKISSKDFIFWFRSHTTKEIKWGGAKHEPVDA 539
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVA--EDSKMIV 591
D GRKMHPRSSFKAFLEVVK RS+PWEDVEMDAIHSLQLILRGSLQDE A + + IV
Sbjct: 540 DDNGRKMHPRSSFKAFLEVVKWRSVPWEDVEMDAIHSLQLILRGSLQDEDANRNNVRSIV 599
Query: 592 NVPSVD-DRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQ 650
P D +I+ + ELR +TNEMVRLIETA P+LAVD +GN+NGWN+KAAELTGL V +
Sbjct: 600 KAPPDDTKKIQGLLELRTVTNEMVRLIETATAPVLAVDIAGNINGWNNKAAELTGLPVME 659
Query: 651 AIGTALVDLVAGDSVDVVKNMLSSAFLAI 679
AIG L+DLV DS++VVK +L SA I
Sbjct: 660 AIGRPLIDLVVVDSIEVVKRILDSALQGI 688
>gi|13429830|dbj|BAB39687.1| phytochrome [Marchantia paleacea subsp. diptera]
Length = 1126
Score = 981 bits (2536), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/681 (69%), Positives = 553/681 (81%), Gaps = 10/681 (1%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTS-N 58
ST K YS SSA+SK + R+ QT+ DAKL F+ES FDY+ S+N S ST +
Sbjct: 2 STTKVTYSSGSSAKSKHSVRIV-QTTADAKLQAVFEESGESGDSFDYTKSINASKSTGES 60
Query: 59 VPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
VP+ V+AYLQR+QRG L Q FGCM+AV+E F VL YSENAPEMLDL P AVP + QQD
Sbjct: 61 VPAQAVTAYLQRMQRGGLTQTFGCMLAVEELTFRVLAYSENAPEMLDLMPQAVPCVGQQD 120
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
L +G D RTLF S+ A AL+KAA +V++ NPI + CK+SGKPFYAI+HRID GLVID
Sbjct: 121 VLGIGTDARTLFNSASAVALEKAAGALDVSMFNPISVQCKSSGKPFYAIVHRIDAGLVID 180
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
+EPV P D V+AAGAL+S+KLAAKAISRLQSLP G+I LLCD +V EV +LTGYDRVM
Sbjct: 181 IEPVRPSDPSVSAAGALQSHKLAAKAISRLQSLPGGDIGLLCDTVVEEVRELTGYDRVMA 240
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL MKN+VRMICDC A PV+VI
Sbjct: 241 YKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMKNRVRMICDCCAQPVQVI 300
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDND--QEQGRK 356
QDK+L QPLSL GSTLRAPHGCHA+YM NMGSIASLVM+V IN ++E + +GRK
Sbjct: 301 QDKELRQPLSLAGSTLRAPHGCHAQYMGNMGSIASLVMAVIINVNDEEYSSRGYHHKGRK 360
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHT+PR VPFPLR ACEFL+QVFG+Q+N EVEL+AQLREK ILRTQT+LCDML
Sbjct: 361 LWGLVVCHHTTPRSVPFPLRSACEFLMQVFGLQLNMEVELAAQLREKRILRTQTLLCDML 420
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+P+GIV+Q+PN+MDLVKCDGAALYY + W+LG TPTE QIKDIA+WLLEYH+ STG
Sbjct: 421 LRDAPIGIVSQSPNIMDLVKCDGAALYYGKRYWVLGTTPTELQIKDIADWLLEYHKDSTG 480
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKEIKWGGAKHD KD
Sbjct: 481 LSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEIKWGGAKHDPDDKDD 540
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
GRKMHPRSSFKAFLEVVK+RSLPWEDVEMDAIHSLQLILRGS QD D+K +++
Sbjct: 541 GRKMHPRSSFKAFLEVVKRRSLPWEDVEMDAIHSLQLILRGSFQDIDDSDTKTMIHARLN 600
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D +++ +DEL + NEMVRLIETA PILAVD+SG +NGWN+K AELTGL V +A+G +L
Sbjct: 601 DLKLQGMDELSTVANEMVRLIETATAPILAVDSSGFINGWNAKVAELTGLPVSEAMGRSL 660
Query: 657 V-DLVAGDSVDVVKNMLSSAF 676
V DL +SV+ V+ +L A
Sbjct: 661 VKDLALEESVETVERLLYLAL 681
>gi|297801114|ref|XP_002868441.1| hypothetical protein ARALYDRAFT_493637 [Arabidopsis lyrata subsp.
lyrata]
gi|297314277|gb|EFH44700.1| hypothetical protein ARALYDRAFT_493637 [Arabidopsis lyrata subsp.
lyrata]
Length = 1112
Score = 979 bits (2532), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/674 (68%), Positives = 570/674 (84%), Gaps = 10/674 (1%)
Query: 9 TNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNIS---SSTSNVPSST 63
+N SRS S RS++N+RV++Q +DAKL +F+ES+ FDYS S+N++ SS+ +PSS
Sbjct: 3 SNTSRSCSTRSRKNSRVSSQVLVDAKLHTNFEESERLFDYSASINLNMPSSSSCEIPSSA 62
Query: 64 VSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLG 123
VS YLQ++QRG LIQPFGC+I VDE+N V+ +SEN EML L PH VP++EQ++AL++G
Sbjct: 63 VSTYLQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLTPHTVPSMEQREALSIG 122
Query: 124 IDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVN 183
DV++LF S G +ALQKA +FGE+++LNPI +HC++S KPFYAILHRI+ GLVIDLEPV+
Sbjct: 123 TDVKSLFQSPGCSALQKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVS 182
Query: 184 PDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHE 243
PD+VPVTAAGAL+SYKLAA +ISRLQ+LP GN+ LLCD LV EVS+LTGYDRVMVYKFHE
Sbjct: 183 PDEVPVTAAGALRSYKLAAISISRLQALPGGNMLLLCDALVKEVSELTGYDRVMVYKFHE 242
Query: 244 DEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKL 303
D HGEV+AEC R DLEPYLG HY ATDIPQASRFL M+NKVRMICDC A PVKV+QDK L
Sbjct: 243 DGHGEVIAECCREDLEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSL 302
Query: 304 DQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE-DELDNDQEQGRKLWGLVV 362
QP+SL GSTLRAPHGCHA+YM NMGS+ASLVMSVTIN ++ DE++ D + GR LWGLVV
Sbjct: 303 SQPISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVV 362
Query: 363 CHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPV 422
CHH SPRF+PFPLRYACEFL QVFGVQVNKE E + L+EK IL+TQ+VLCDML R++P+
Sbjct: 363 CHHASPRFLPFPLRYACEFLTQVFGVQVNKEAESAVLLKEKRILQTQSVLCDMLFRNAPI 422
Query: 423 GIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSL 482
GIVTQ+PN+MDLVKCDGAALYYR KLW LGVTPTE QI+D+ +W+L+ H G+TG +T+SL
Sbjct: 423 GIVTQSPNIMDLVKCDGAALYYREKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESL 482
Query: 483 VEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHP 542
+E+GYP A LG+++CG+AAV IT KDFLFWFRS TAK+I+WGGA+HD +D G++MHP
Sbjct: 483 MESGYPDASVLGESICGMAAVYITDKDFLFWFRSGTAKQIQWGGARHDPNDRD-GKRMHP 541
Query: 543 RSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEK 602
RSSFKAF+E+V+ +S+PW+D+EMDAI+SLQLI++GSLQD E SK +VNVP VD+R++K
Sbjct: 542 RSSFKAFMEIVRWKSMPWDDMEMDAINSLQLIIKGSLQD---EHSKTVVNVPFVDNRVQK 598
Query: 603 IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAG 662
+DEL +I NEMVRLI+TAAVPI AVDASG +NGWNSKAAE++GL ++QAIG + DLV
Sbjct: 599 VDELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVSGLAIEQAIGKPVSDLVED 658
Query: 663 DSVDVVKNMLSSAF 676
DS + VKNML+ A
Sbjct: 659 DSAETVKNMLALAL 672
>gi|108802819|gb|ABG21360.1| PHYTOCHROME C [Arabidopsis lyrata]
Length = 1055
Score = 978 bits (2528), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/674 (68%), Positives = 570/674 (84%), Gaps = 10/674 (1%)
Query: 9 TNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNIS---SSTSNVPSST 63
+N SRS S RS++N+RV++Q +DAKL +F+ES+ FDYS S+N++ SS+ +PSS
Sbjct: 3 SNTSRSCSTRSRKNSRVSSQVLVDAKLHTNFEESERLFDYSASINLNMPSSSSCEIPSSA 62
Query: 64 VSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLG 123
VS YLQ++QRG LIQPFGC+I VDE+N V+ +SEN EML L PH VP++EQ++AL++G
Sbjct: 63 VSTYLQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLTPHTVPSMEQREALSIG 122
Query: 124 IDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVN 183
DV++LF S G +ALQKA +FGE+++LNPI +HC++S KPFYAILHRI+ GLVIDLEPV+
Sbjct: 123 TDVKSLFQSPGCSALQKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVS 182
Query: 184 PDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHE 243
PD+VPVTAAGAL+SYKLAA +ISRLQ+LP GN+ LLCD LV EVS+LTGYDRVMVYKFHE
Sbjct: 183 PDEVPVTAAGALRSYKLAAISISRLQALPGGNMLLLCDALVKEVSELTGYDRVMVYKFHE 242
Query: 244 DEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKL 303
D HGEV+AEC R DLEPYLG HY ATDIPQASRFL M+NKVRMICDC A PVKV+QDK L
Sbjct: 243 DGHGEVIAECCREDLEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSL 302
Query: 304 DQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE-DELDNDQEQGRKLWGLVV 362
QP+SL GSTLRAPHGCHA+YM NMGS+ASLVMSVTIN ++ DE++ D + GR LWGLVV
Sbjct: 303 SQPISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVV 362
Query: 363 CHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPV 422
CHH SPRF+PFPLRYACEFL QVFGVQVNKE E + L+EK IL+TQ+VLCDML R++P+
Sbjct: 363 CHHASPRFLPFPLRYACEFLTQVFGVQVNKEAESAVLLKEKRILQTQSVLCDMLFRNAPI 422
Query: 423 GIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSL 482
GIVTQ+PN+MDLVKCDGAALYYR KLW LGVTPTE QI+D+ +W+L+ H G+TG +T+SL
Sbjct: 423 GIVTQSPNIMDLVKCDGAALYYREKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESL 482
Query: 483 VEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHP 542
+E+GYP A LG+++CG+AAV IT KDFLFWFRS TAK+I+WGGA+HD +D G++MHP
Sbjct: 483 MESGYPDASVLGESICGMAAVYITDKDFLFWFRSGTAKQIQWGGARHDPNDRD-GKRMHP 541
Query: 543 RSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEK 602
RSSFKAF+E+V+ +S+PW+D+EMDAI+SLQLI++GSLQD E SK +VNVP VD+R++K
Sbjct: 542 RSSFKAFMEIVRWKSMPWDDMEMDAINSLQLIIKGSLQD---EHSKTVVNVPFVDNRVQK 598
Query: 603 IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAG 662
+DEL +I NEMVRLI+TAAVPI AVDASG +NGWNSKAAE++GL ++QAIG + DLV
Sbjct: 599 VDELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVSGLAIEQAIGKPVSDLVED 658
Query: 663 DSVDVVKNMLSSAF 676
DS + VKNML+ A
Sbjct: 659 DSAETVKNMLALAL 672
>gi|168042146|ref|XP_001773550.1| phytochrome 4 [Physcomitrella patens subsp. patens]
gi|139001628|dbj|BAF51710.1| phytochrome4 [Physcomitrella patens]
gi|162675089|gb|EDQ61588.1| phytochrome 4 [Physcomitrella patens subsp. patens]
Length = 1126
Score = 977 bits (2525), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/681 (69%), Positives = 558/681 (81%), Gaps = 10/681 (1%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTS-N 58
ST K YS SS +SK + RVA QT+ DAKL ++ES FDYS SV+ S ST N
Sbjct: 2 STTKLAYSSGSSVKSKHSVRVA-QTTADAKLQAVYEESGDSGDSFDYSKSVHASKSTGEN 60
Query: 59 VPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
VP+ V+AYLQR+QRG L+Q FGCM+ VDE +F V+ YSENAPEMLDL P AVP++ QQ+
Sbjct: 61 VPALAVTAYLQRMQRGGLVQTFGCMLCVDESSFRVIAYSENAPEMLDLMPQAVPSVGQQE 120
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
L +G D RTLFT S AAAL+K A +V +LNPI +HC++SGKPFYAILHRIDVGLVID
Sbjct: 121 VLGIGTDARTLFTPSSAAALEKCAGAVDVTMLNPISVHCRSSGKPFYAILHRIDVGLVID 180
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
EPV P+D V++AGAL+S+KLAAKAISRLQ+LP G+I LLCD +V EV L+GYDRVM
Sbjct: 181 FEPVRPNDAVVSSAGALQSHKLAAKAISRLQALPGGDIGLLCDTVVEEVRQLSGYDRVMA 240
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFHEDEHGEV+AE RR DLEPYLG HYPATDIPQASRFL MKN+VRMI DC APPVKV+
Sbjct: 241 YKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMKNRVRMIGDCYAPPVKVV 300
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN--DQEQGRK 356
QDK L QP+SL GSTLRAPHGCHA+YM NM SIASLVM+V +N+ +++ ++ Q++GRK
Sbjct: 301 QDKDLRQPISLAGSTLRAPHGCHAQYMGNMNSIASLVMAVIVNDPDEDPNSRGGQQRGRK 360
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTSPR V FPLR ACEFL+QVFG+Q+N EVEL+AQLREKHILRTQT+LCDML
Sbjct: 361 LWGLVVCHHTSPRTVSFPLRSACEFLMQVFGLQLNMEVELAAQLREKHILRTQTLLCDML 420
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+P+GIV+Q+PN+MDLVKCDGAALYY + WLLG+TP E QIK+IA+WLLE+H+ STG
Sbjct: 421 LRDAPIGIVSQSPNIMDLVKCDGAALYYGKRFWLLGITPNEVQIKEIADWLLEHHQDSTG 480
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+AA KIT +DFLFWFRSHTAKEIKWGGAKHD KD
Sbjct: 481 LSTDSLADAGYPGAAQLGDAVCGMAAAKITPRDFLFWFRSHTAKEIKWGGAKHDPDEKDD 540
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
GRKMHPRSSFKAFLEVVK+RSLPWED+EMDAIHSLQLILRGS QD D+K +++
Sbjct: 541 GRKMHPRSSFKAFLEVVKRRSLPWEDIEMDAIHSLQLILRGSFQDIDDSDTKTMIHARLN 600
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D +++ +DEL + NEMVRLIETA PILAVD+SG +NGWN+K AELTGL V +A+G +L
Sbjct: 601 DLKLQGMDELSTVANEMVRLIETATAPILAVDSSGFINGWNAKVAELTGLPVGEAMGRSL 660
Query: 657 V-DLVAGDSVDVVKNMLSSAF 676
V DL+ +S+DVV+ +L A
Sbjct: 661 VKDLILEESIDVVQRLLYLAL 681
>gi|240119419|dbj|BAH79258.1| phytochrome C [Cardamine nipponica]
Length = 1112
Score = 972 bits (2513), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/660 (68%), Positives = 556/660 (84%), Gaps = 9/660 (1%)
Query: 22 NARVAAQTSIDAKLAEDFDESD--FDYSTSVNIS--SSTSNVPSSTVSAYLQRVQRGRLI 77
N+RV +Q +DA L +F+ES+ FDYS SVN++ SS+ ++PSS VS YLQ++QRG LI
Sbjct: 17 NSRVTSQFLVDATLHRNFEESERLFDYSASVNLNMPSSSFDIPSSAVSTYLQKIQRGMLI 76
Query: 78 QPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAA 137
QPFGC+I VDE+N V+ +SEN EML L PH VP++EQ++AL++G DV++LF S G++A
Sbjct: 77 QPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALSIGTDVKSLFQSPGSSA 136
Query: 138 LQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKS 197
LQKA +FGE+++LNPI +HC +S KPFYAILHRI+ GLVIDLEPV+PD+VPVTAAGAL+S
Sbjct: 137 LQKAIDFGEISILNPITLHCMSSSKPFYAILHRIEEGLVIDLEPVSPDEVPVTAAGALRS 196
Query: 198 YKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPD 257
YKLAAK+ISRLQ+LPSGN+ LLCD LV EVS+LTGYDRVMVYKFH+D HGEV+AEC R D
Sbjct: 197 YKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHDDGHGEVIAECCRED 256
Query: 258 LEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAP 317
LEPYLG HY ATDIPQASRFL M+NKVRMICDC A PVKV+QDK L QP+SL GSTLRAP
Sbjct: 257 LEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPISLSGSTLRAP 316
Query: 318 HGCHARYMENMGSIASLVMSVTIN-EAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCHA+YM NMGS+ASLVMSVTIN D+++ D + GR LWGLVVCHH SPRFVPFPLR
Sbjct: 317 HGCHAQYMSNMGSVASLVMSVTINCRDSDDMNRDLQTGRSLWGLVVCHHASPRFVPFPLR 376
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEF+IQVFGVQ+NKE E + L+EK IL+TQ+VLCDML R++P+GI+TQ+PN+MDLVK
Sbjct: 377 YACEFMIQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIITQSPNIMDLVK 436
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAAL+YR KLW LGVTPTE QI+D+ +W+L+ H G+TG +T+SL+E+GYP A LG++
Sbjct: 437 CDGAALFYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLMESGYPDASVLGES 496
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
+CG+AAV IT KDFLFWFRS AKEIKWGGA+HD +DG R MHPRSSFKAF+E+V+ +
Sbjct: 497 ICGMAAVYITEKDFLFWFRSSNAKEIKWGGARHDPNDRDGKR-MHPRSSFKAFMEIVRWK 555
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
S+PW+D+EMDAI+SLQLI++GSLQ+ E SK + NVP VD+R++K+DEL +I NEMVRL
Sbjct: 556 SMPWDDMEMDAINSLQLIIKGSLQE---EHSKTVENVPFVDNRVQKVDELCVIVNEMVRL 612
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
I+TAAVPI AVDASG +NGWNSKAAE+TGL V+QAIG + DLV DS + V NML+ A
Sbjct: 613 IDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDDSAETVTNMLALAL 672
>gi|240119407|dbj|BAH79252.1| phytochrome C [Cardamine nipponica]
gi|240119413|dbj|BAH79255.1| phytochrome C [Cardamine nipponica]
gi|240119415|dbj|BAH79256.1| phytochrome C [Cardamine nipponica]
gi|240119417|dbj|BAH79257.1| phytochrome C [Cardamine nipponica]
gi|240119421|dbj|BAH79259.1| phytochrome C [Cardamine nipponica]
Length = 1112
Score = 971 bits (2511), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/660 (68%), Positives = 558/660 (84%), Gaps = 9/660 (1%)
Query: 22 NARVAAQTSIDAKLAEDFDESD--FDYSTSVNIS--SSTSNVPSSTVSAYLQRVQRGRLI 77
N+RV +Q +DA L +F+ES+ FDYS SVN++ SS+ ++PSS VS YLQ++QRG LI
Sbjct: 17 NSRVTSQFLVDATLHRNFEESERLFDYSASVNLNMPSSSFDIPSSAVSTYLQKIQRGMLI 76
Query: 78 QPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAA 137
QPFGC+I VDE+N V+ +SEN EML L PH VP++EQ++AL++G DV++LF S G++A
Sbjct: 77 QPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALSIGTDVKSLFQSPGSSA 136
Query: 138 LQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKS 197
LQKA +FGE+++LNPI +HC +S KPFYAILHRI+ GLVIDLEPV+PD+VPVTAAGAL+S
Sbjct: 137 LQKAIDFGEISILNPITLHCMSSSKPFYAILHRIEEGLVIDLEPVSPDEVPVTAAGALRS 196
Query: 198 YKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPD 257
YKLAAK+ISRLQ+LPSGN+ LLCD LV EVS+LTGYDRVMVYKFH+D HGEV+AEC R D
Sbjct: 197 YKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHDDGHGEVIAECCRED 256
Query: 258 LEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAP 317
LEPYLG HY ATDIPQASRFL M+NKVRMICDC A PVKV+QDK L QP+SL GSTLRAP
Sbjct: 257 LEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPISLSGSTLRAP 316
Query: 318 HGCHARYMENMGSIASLVMSVTINEAE-DELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCHA+YM NMGS+ASLVMSVTIN ++ D+++ D + GR LWGLVVCHH SPRF+PFPLR
Sbjct: 317 HGCHAQYMSNMGSVASLVMSVTINCSDSDDMNRDLQTGRSLWGLVVCHHASPRFMPFPLR 376
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEF+IQVFGVQ+NKE E + L+EK IL+TQ+VLCDML R++P+GI+TQ+PN+MDLVK
Sbjct: 377 YACEFMIQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIITQSPNIMDLVK 436
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAAL+YR KLW LGVTPTE QI+D+ +W+L+ H G+TG +T+SL+E+GYP A LG++
Sbjct: 437 CDGAALFYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLMESGYPDASVLGES 496
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
+CG+AAV IT KDFLFWFRS AKEIKWGGA+HD +DG R MHPRSSFKAF+E+V+ +
Sbjct: 497 ICGMAAVYITEKDFLFWFRSSNAKEIKWGGARHDPNDRDGKR-MHPRSSFKAFMEIVRWK 555
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
S+PW+D+EMDAI+SLQLI++GSLQ+ E SK + NVP VD+R++K+DEL +I NEMVRL
Sbjct: 556 SMPWDDMEMDAINSLQLIIKGSLQE---EHSKTVENVPFVDNRVQKVDELCVIVNEMVRL 612
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
I+TAAVPI AVDASG +NGWNSKAAE+TGL V+QAIG + DLV DS + V NML+ A
Sbjct: 613 IDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDDSAETVTNMLALAL 672
>gi|240119423|dbj|BAH79260.1| phytochrome C [Cardamine nipponica]
Length = 1111
Score = 971 bits (2509), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/660 (68%), Positives = 555/660 (84%), Gaps = 9/660 (1%)
Query: 22 NARVAAQTSIDAKLAEDFDESD--FDYSTSVNIS--SSTSNVPSSTVSAYLQRVQRGRLI 77
N+RV +Q +DA L +F+ES+ FDYS SVN++ SS+ ++PSS VS YLQ++QRG LI
Sbjct: 16 NSRVTSQFLVDATLHRNFEESERLFDYSASVNLNMPSSSFDIPSSAVSTYLQKIQRGMLI 75
Query: 78 QPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAA 137
QPFGC+I VDE+N V+ +SEN EML L PH VP++EQ++AL++G DV++LF S G++A
Sbjct: 76 QPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALSIGTDVKSLFQSPGSSA 135
Query: 138 LQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKS 197
LQKA +FGE+++LNPI +HC +S KPFYAILHRI+ GLVIDLEPV+PD+VPVTAAGAL+S
Sbjct: 136 LQKAIDFGEISILNPITLHCMSSSKPFYAILHRIEEGLVIDLEPVSPDEVPVTAAGALRS 195
Query: 198 YKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPD 257
YKLAAK+ISRLQ+LPSGN+ LLCD LV EVS+LTGYDRVMVYKFH+D HGEV+AEC R D
Sbjct: 196 YKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHDDGHGEVIAECCRED 255
Query: 258 LEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAP 317
LEPYLG HY ATDIPQASRFL M+NKVRMICDC A PVKV+QDK L QP+SL GSTLRAP
Sbjct: 256 LEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPISLSGSTLRAP 315
Query: 318 HGCHARYMENMGSIASLVMSVTIN-EAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCHA+YM NMGS+ASLVMSVTIN D+++ D + GR LWGLVVCHH SPRFVPFPLR
Sbjct: 316 HGCHAQYMSNMGSVASLVMSVTINCRDSDDMNRDLQTGRSLWGLVVCHHASPRFVPFPLR 375
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEF+IQVFGVQ+NKE E + L+EK IL+TQ+VLCDML R++P+GI+TQ+PN+MDLVK
Sbjct: 376 YACEFMIQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIITQSPNIMDLVK 435
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAAL+YR KLW LGVTPTE QI+D+ +W+L+ H G+TG +T+SL+E+GYP A G++
Sbjct: 436 CDGAALFYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLMESGYPDASVFGES 495
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
+CG+AAV IT KDFLFWFRS AKEIKWGGA+HD +DG R MHPRSSFKAF+E+V+ +
Sbjct: 496 ICGMAAVYITEKDFLFWFRSSNAKEIKWGGARHDPNDRDGKR-MHPRSSFKAFMEIVRWK 554
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
S+PW+D+EMDAI+SLQLI++GSLQ+ E SK + NVP VD+R++K+DEL +I NEMVRL
Sbjct: 555 SMPWDDMEMDAINSLQLIIKGSLQE---EHSKTVENVPFVDNRVQKVDELCVIVNEMVRL 611
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
I+TAAVPI AVDASG +NGWNSKAAE+TGL V+QAIG + DLV DS + V NML+ A
Sbjct: 612 IDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDDSAETVTNMLALAL 671
>gi|25986843|gb|AAM94952.1| phytochrome [Physcomitrella patens]
Length = 1126
Score = 970 bits (2508), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/681 (68%), Positives = 555/681 (81%), Gaps = 10/681 (1%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTS-N 58
ST K YS SS +SK + RVA QT+ DAKL ++ES FDYS SV+ S ST N
Sbjct: 2 STTKLAYSSGSSVKSKHSVRVA-QTTADAKLQAVYEESGDSGDSFDYSKSVHASKSTGEN 60
Query: 59 VPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
VP+ V+AYLQR+QRG L+Q FGCM+ VDE +F V+ YSENAPEMLDL P AVP++ QQ+
Sbjct: 61 VPALAVTAYLQRMQRGGLVQTFGCMLCVDESSFRVIAYSENAPEMLDLMPQAVPSVGQQE 120
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
L +G D RTLFT S AAAL+K A +V +LNPI +HC++SGKPFYAILHRIDVGLVID
Sbjct: 121 VLGIGTDARTLFTPSSAAALEKCAGAVDVTMLNPISVHCRSSGKPFYAILHRIDVGLVID 180
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
EPV P+D V++AGAL+S+KLAAKAISRLQ+LP G+I LLCD +V EV L+GYDRVM
Sbjct: 181 FEPVRPNDAVVSSAGALQSHKLAAKAISRLQALPGGDIGLLCDTVVEEVRQLSGYDRVMA 240
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFHEDEHGEV+AE RR DLEPYLG HYPATDIPQASRFL MKN+VRMI DC APPVKV+
Sbjct: 241 YKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMKNRVRMIGDCYAPPVKVV 300
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN--DQEQGRK 356
QDK L QP+SL GSTLRAPHGCHA+YM NM SIASLVM+V +N+ +++ ++ Q++GRK
Sbjct: 301 QDKDLRQPISLAGSTLRAPHGCHAQYMGNMNSIASLVMAVIVNDPDEDPNSRGGQQRGRK 360
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTSPR V FPLR ACEFL+ VFG+Q+N EVEL+AQLREKHILRTQT+LCDML
Sbjct: 361 LWGLVVCHHTSPRTVSFPLRSACEFLMLVFGLQLNMEVELAAQLREKHILRTQTLLCDML 420
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+P+GIV+Q+PN+MDLVKCDGAALYY + WLLG+TP E QIK+IA+W LE+H+ STG
Sbjct: 421 LRDAPIGIVSQSPNIMDLVKCDGAALYYGKRFWLLGITPNEVQIKEIADWFLEHHQDSTG 480
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+AA KIT +DFLFWFRSHTAKEIKWGGAKHD KD
Sbjct: 481 LSTDSLADAGYPGAAQLGDAVCGMAAAKITPRDFLFWFRSHTAKEIKWGGAKHDPDEKDD 540
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
GRKMHPRSSFKAFLEVVK+RSLPWED+EMDAIHSLQLI RGS QD D+K +++
Sbjct: 541 GRKMHPRSSFKAFLEVVKRRSLPWEDIEMDAIHSLQLISRGSFQDIDDSDTKTMIHARLN 600
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D +++ +DEL + NEMVRLIETA PILAVD+SG +NGWN+K AELTGL V +A+G +L
Sbjct: 601 DLKLQGMDELSTVANEMVRLIETATAPILAVDSSGFINGWNAKVAELTGLPVGEAMGRSL 660
Query: 657 V-DLVAGDSVDVVKNMLSSAF 676
V DL+ +S+DVV+ +L A
Sbjct: 661 VKDLILEESIDVVQRLLYLAL 681
>gi|240119411|dbj|BAH79254.1| phytochrome C [Cardamine nipponica]
Length = 1112
Score = 970 bits (2507), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/660 (68%), Positives = 555/660 (84%), Gaps = 9/660 (1%)
Query: 22 NARVAAQTSIDAKLAEDFDESD--FDYSTSVNIS--SSTSNVPSSTVSAYLQRVQRGRLI 77
N+RV +Q +DA L +F+ES+ FDYS SVN++ SS+ ++PSS VS YLQ++QRG LI
Sbjct: 17 NSRVTSQFLVDATLHRNFEESERLFDYSASVNLNMPSSSFDIPSSAVSTYLQKIQRGMLI 76
Query: 78 QPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAA 137
QPFGC+I VDE+N V+ +SEN EML PH VP++EQ++AL++G DV++LF S G++A
Sbjct: 77 QPFGCLIVVDEKNLKVIAFSENTEEMLGSIPHTVPSMEQREALSIGTDVKSLFQSPGSSA 136
Query: 138 LQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKS 197
LQKA +FGE+++LNPI +HC +S KPFYAILHRI+ GLVIDLEPV+PD+VPVTAAGAL+S
Sbjct: 137 LQKAIDFGEISILNPITLHCMSSSKPFYAILHRIEEGLVIDLEPVSPDEVPVTAAGALRS 196
Query: 198 YKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPD 257
YKLAAK+ISRLQ+LPSGN+ LLCD LV EVS+LTGYDRVMVYKFH+D HGEV+AEC R D
Sbjct: 197 YKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHDDGHGEVIAECCRED 256
Query: 258 LEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAP 317
LEPYLG HY ATDIPQASRFL M+NKVRMICDC A PVKV+QDK L QP+SL GSTLRAP
Sbjct: 257 LEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPISLSGSTLRAP 316
Query: 318 HGCHARYMENMGSIASLVMSVTIN-EAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCHA+YM NMGS+ASLVMSVTIN D+++ D + GR LWGLVVCHH SPRFVPFPLR
Sbjct: 317 HGCHAQYMSNMGSVASLVMSVTINCRDSDDMNRDLQTGRSLWGLVVCHHASPRFVPFPLR 376
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEF+IQVFGVQ+NKE E + L+EK IL+TQ+VLCDML R++P+GI+TQ+PN+MDLVK
Sbjct: 377 YACEFMIQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIITQSPNIMDLVK 436
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAAL+YR KLW LGVTPTE QI+D+ +W+L+ H G+TG +T+SL+E+GYP A LG++
Sbjct: 437 CDGAALFYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLMESGYPDASVLGES 496
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
+CG+AAV IT KDFLFWFRS AKEIKWGGA+HD +DG R MHPRSSFKAF+E+V+ +
Sbjct: 497 ICGMAAVYITEKDFLFWFRSSNAKEIKWGGARHDPNDRDGKR-MHPRSSFKAFMEIVRWK 555
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
S+PW+D+EMDAI+SLQLI++GSLQ+ E SK + NVP VD+R++K+DEL +I NEMVRL
Sbjct: 556 SMPWDDMEMDAINSLQLIIKGSLQE---EHSKTVENVPFVDNRVQKVDELCVIVNEMVRL 612
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
I+TAAVPI AVDASG +NGWNSKAAE+TGL V+QAIG + DLV DS + V NML+ A
Sbjct: 613 IDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDDSAETVTNMLALAL 672
>gi|240119409|dbj|BAH79253.1| phytochrome C [Cardamine nipponica]
Length = 1112
Score = 969 bits (2506), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/660 (68%), Positives = 555/660 (84%), Gaps = 9/660 (1%)
Query: 22 NARVAAQTSIDAKLAEDFDESD--FDYSTSVNIS--SSTSNVPSSTVSAYLQRVQRGRLI 77
N+RV +Q +DA L +F+ES+ FDYS SVN++ SS+ ++PSS VS YLQ++QRG LI
Sbjct: 17 NSRVTSQFLVDATLHRNFEESERLFDYSASVNLNMPSSSFDIPSSAVSTYLQKIQRGMLI 76
Query: 78 QPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAA 137
QPFGC+I VDE+N V+ +SEN EML PH VP++EQ++AL++G DV++LF S G++A
Sbjct: 77 QPFGCLIVVDEKNLKVIAFSENTEEMLGSIPHTVPSMEQREALSIGTDVKSLFQSPGSSA 136
Query: 138 LQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKS 197
LQKA +FGE+++LNPI +HC +S KPFYAILHRI+ GLVIDLEPV+PD+VPVTAAGAL+S
Sbjct: 137 LQKAIDFGEISILNPITLHCMSSSKPFYAILHRIEEGLVIDLEPVSPDEVPVTAAGALRS 196
Query: 198 YKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPD 257
YKLAAK+ISRLQ+LPSGN+ LLCD LV EVS+LTGYDRVMVYKFH+D HGEV+AEC R D
Sbjct: 197 YKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHDDGHGEVIAECCRED 256
Query: 258 LEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAP 317
LEPYLG HY ATDIPQASRFL M+NKVRMICDC A PVKV+QDK L QP+SL GSTLRAP
Sbjct: 257 LEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPISLSGSTLRAP 316
Query: 318 HGCHARYMENMGSIASLVMSVTIN-EAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCHA+YM NMGS+ASLVMSVTIN D+++ D + GR LWGLVVCHH SPRFVPFPLR
Sbjct: 317 HGCHAQYMSNMGSVASLVMSVTINCRDSDDMNRDLQTGRSLWGLVVCHHASPRFVPFPLR 376
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEF+IQVFGVQ+NKE E + L+EK IL+TQ+VLCDML R++P+GI+TQ+PN+MDLVK
Sbjct: 377 YACEFMIQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIITQSPNIMDLVK 436
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAAL+YR KLW LGVTPTE QI+D+ +W+L+ H G+TG +T+SL+E+GYP A LG++
Sbjct: 437 CDGAALFYRDKLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLMESGYPDASVLGES 496
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
+CG+AAV IT KDFLFWFRS AKEIKWGGA+HD +DG R MHPRSSFKAF+E+V+ +
Sbjct: 497 ICGMAAVYITEKDFLFWFRSSNAKEIKWGGARHDPNDRDGKR-MHPRSSFKAFMEIVRWK 555
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
S+PW+D+EMDAI+SLQLI++GSLQ+ E SK + NVP VD+R++K+DEL +I NEMVRL
Sbjct: 556 SMPWDDMEMDAINSLQLIIKGSLQE---EHSKTVENVPFVDNRVQKVDELCVIVNEMVRL 612
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
I+TAAVPI AVDASG +NGWNSKAAE+TGL V+QAIG + DLV DS + V NML+ A
Sbjct: 613 IDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDDSAETVTNMLALAL 672
>gi|240119425|dbj|BAH79261.1| phytochrome C [Cardamine resedifolia]
Length = 1112
Score = 969 bits (2506), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/660 (67%), Positives = 555/660 (84%), Gaps = 9/660 (1%)
Query: 22 NARVAAQTSIDAKLAEDFDESD--FDYSTSVNIS--SSTSNVPSSTVSAYLQRVQRGRLI 77
N+RV +Q +DA L +F+ES+ FDYS SVN++ SS+ ++PSS VS YLQ +QRG LI
Sbjct: 17 NSRVTSQVLVDATLHRNFEESERLFDYSASVNLNMPSSSFDIPSSAVSTYLQNIQRGMLI 76
Query: 78 QPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAA 137
QPFGC+I VDE+N V+ +SEN EML L PH VP++EQ++AL++G DV++LF S G++A
Sbjct: 77 QPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREALSIGTDVKSLFQSPGSSA 136
Query: 138 LQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKS 197
LQKA +FGE+++LNPI +HC +S KPFYAILHRI+ GL+IDLEPV+PD+VPVTAAGAL+S
Sbjct: 137 LQKAIDFGEISILNPITLHCMSSSKPFYAILHRIEEGLLIDLEPVSPDEVPVTAAGALRS 196
Query: 198 YKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPD 257
YKLAAK+ISRLQ+LPSGN+ LLCD LV EVS+LTGYDRVMVYKFH+D HGEV+AEC R D
Sbjct: 197 YKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHDDGHGEVIAECCRED 256
Query: 258 LEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAP 317
LEPYLG HY ATDIPQASRFL M+NKVRMICDC A PVKV+QDK L QP+SL GSTLRAP
Sbjct: 257 LEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPISLSGSTLRAP 316
Query: 318 HGCHARYMENMGSIASLVMSVTIN-EAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCHA+YM NMGS+ASLVMSVTIN D+++ D + GR LWGLVVCHH SPRFVPFPLR
Sbjct: 317 HGCHAQYMSNMGSVASLVMSVTINCRDSDDMNRDLQTGRSLWGLVVCHHASPRFVPFPLR 376
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEF+IQVFGVQ+NKE E + L+EK IL+TQ+VLCDML R++P+GI+TQ+PN+MDLV+
Sbjct: 377 YACEFMIQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIITQSPNIMDLVE 436
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAAL+YR KLW LGVTPTE QI+D+ W+L+ H G+TG +T+SL+E+GYP A LG++
Sbjct: 437 CDGAALFYRDKLWSLGVTPTETQIRDLIHWVLKSHGGNTGFTTESLMESGYPDASVLGES 496
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
+CG+AAV IT KDFLFWFRS AKEIKWGGA+HD +D G++MHPRSSFKAF+E+V+ +
Sbjct: 497 ICGMAAVYITEKDFLFWFRSSNAKEIKWGGARHDPNDRD-GKRMHPRSSFKAFMEIVRWK 555
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
S+PW+D+EMDAI+SLQLI++GSLQ+ E SK + NVP VD+R++K+DEL +I NEMVRL
Sbjct: 556 SMPWDDMEMDAINSLQLIIKGSLQE---EHSKTVENVPFVDNRVQKVDELCVIVNEMVRL 612
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
I+TAAVPI AVDASG +NGWNSKAAE+TGL V+QAIG + DLV DS + V NML+ A
Sbjct: 613 IDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKPVSDLVEDDSAETVTNMLALAL 672
>gi|168060714|ref|XP_001782339.1| phytochrome 2 [Physcomitrella patens subsp. patens]
gi|139001623|dbj|BAF51708.1| phytochrome2 [Physcomitrella patens]
gi|162666198|gb|EDQ52859.1| phytochrome 2 [Physcomitrella patens subsp. patens]
Length = 1130
Score = 968 bits (2502), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/681 (68%), Positives = 555/681 (81%), Gaps = 10/681 (1%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTS-N 58
ST K YS SS +SK + RVA QT+ DAKL ++ES FDYS SV+ S ST N
Sbjct: 2 STPKLAYSSGSSVKSKHSVRVA-QTTADAKLQAVYEESGDSGDSFDYSKSVHASKSTGEN 60
Query: 59 VPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
V + V+AYLQR+QRG L+Q FGCM+ V+E NF V+ +SENAPEMLDL P AVP++ QQ+
Sbjct: 61 VSAQAVTAYLQRMQRGGLMQTFGCMLCVEESNFRVIAFSENAPEMLDLMPQAVPSVGQQE 120
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
L +G D RTLFT S AAAL+K A +V +LNPI +HC++SGKPFYAILHRIDVGLVID
Sbjct: 121 VLGIGTDARTLFTPSSAAALEKCAGAVDVTMLNPISVHCRSSGKPFYAILHRIDVGLVID 180
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
EPV +D V++AG L+S+KLAAKAISRLQ+LP G+I LLCD++V EV +L+GYDRVM
Sbjct: 181 FEPVRSNDAIVSSAGVLQSHKLAAKAISRLQALPGGDIGLLCDIVVQEVRELSGYDRVMA 240
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFHEDEHGEV+AE RR DLEPYLG HYPATDIPQASRFL MKNKVRMI DC A PVKVI
Sbjct: 241 YKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMIGDCFASPVKVI 300
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD--NDQEQGRK 356
QDK L QP+SL GSTLRAPHGCHA+YM NM SIASLVM+V +N+ +++ + Q++GRK
Sbjct: 301 QDKDLRQPISLAGSTLRAPHGCHAQYMGNMNSIASLVMAVIVNDPDEDPNARGGQQRGRK 360
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTSPR V FPLR ACEFL+QVFG+Q+N EVEL+AQLREKHILRTQT+LCDML
Sbjct: 361 LWGLVVCHHTSPRTVSFPLRSACEFLMQVFGLQLNMEVELAAQLREKHILRTQTLLCDML 420
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+P+GIV+Q+PN+MDLVKCDGAALYY + WLLG+TP + QIK+IA+WLLE+H+ STG
Sbjct: 421 LRDAPIGIVSQSPNIMDLVKCDGAALYYGKRFWLLGITPNDAQIKEIADWLLEHHQDSTG 480
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+AA KITSKDFLFWFRSHTAKEIKWGGAKHD KD
Sbjct: 481 LSTDSLADAGYPGAAQLGDAVCGMAAAKITSKDFLFWFRSHTAKEIKWGGAKHDPDEKDD 540
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
GRKMHPRSSFKAFL VVK+RSLPWED+EMDAIHSLQLILRGS QD D+K +++
Sbjct: 541 GRKMHPRSSFKAFLVVVKRRSLPWEDIEMDAIHSLQLILRGSFQDIDDSDTKTMIHARLN 600
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D +++ +DEL + NEMVRLIETA PILAVD+ G +NGWN+K AELTGL V++A+G +L
Sbjct: 601 DLKLQGMDELSTVANEMVRLIETATAPILAVDSGGFINGWNAKVAELTGLPVEEAMGRSL 660
Query: 657 V-DLVAGDSVDVVKNMLSSAF 676
V DL+ +S+DVV+ +L A
Sbjct: 661 VKDLILNESIDVVQRLLHLAL 681
>gi|302818893|ref|XP_002991119.1| hypothetical protein SELMODRAFT_161430 [Selaginella moellendorffii]
gi|300141213|gb|EFJ07927.1| hypothetical protein SELMODRAFT_161430 [Selaginella moellendorffii]
Length = 1143
Score = 967 bits (2499), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/693 (67%), Positives = 560/693 (80%), Gaps = 22/693 (3%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTS-N 58
ST K YS SSA+SK + RVA QT+ DAKL ++ES FDY+ SVN + ST +
Sbjct: 2 STTKLTYSSGSSAKSKHSVRVA-QTTADAKLHAVYEESGESGDSFDYTKSVNATKSTGES 60
Query: 59 VPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE--Q 116
+P+ V+AYLQR+QRG L+QPFGCM+AV+E +F V+ +S+NA EMLDL P +VP++ Q
Sbjct: 61 IPAQAVTAYLQRMQRGGLVQPFGCMLAVEEGSFRVIAFSDNAGEMLDLMPQSVPSLGAGQ 120
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
QD L +G D R+LFT + A+AL+KAA +V++LNPI +HCKTS KPFYAI+HRIDVGLV
Sbjct: 121 QDLLGIGSDARSLFTPASASALEKAAGAIDVSMLNPISVHCKTSAKPFYAIVHRIDVGLV 180
Query: 177 IDLEPVNPDDVPV-TAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDR 235
+DLEPV D V +AAGAL+S+KLAAKAISRLQSLP G+I LLCD +V EV +LTGYDR
Sbjct: 181 LDLEPVKASDTSVGSAAGALQSHKLAAKAISRLQSLPGGDIGLLCDTVVEEVRELTGYDR 240
Query: 236 VMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPV 295
VM YKFH+DEHGEVVAE RR DLEPYLG HYPATDIPQASRFL MKN+VRMICDC A PV
Sbjct: 241 VMAYKFHDDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMKNRVRMICDCSAAPV 300
Query: 296 KVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDND----- 350
K+ QDK L QP+SL GSTLRAPHGCHA+YM NMGS+ASLVM+V IN+ +DE +
Sbjct: 301 KISQDKDLRQPISLAGSTLRAPHGCHAQYMGNMGSVASLVMAVIINDNDDEYRSSSGGGG 360
Query: 351 ------QEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKH 404
Q++GRKLWG+VVCHHTSPR VPFPLR ACEFL+QVFG+Q+N EVEL+AQLREKH
Sbjct: 361 GGGGAYQQKGRKLWGMVVCHHTSPRSVPFPLRSACEFLMQVFGLQLNMEVELAAQLREKH 420
Query: 405 ILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIA 464
ILRTQT+LCDMLLRD+P+GIV+Q+PN+MDLVKCDGAALYY + WLLGVTP+E QIKDIA
Sbjct: 421 ILRTQTLLCDMLLRDAPIGIVSQSPNIMDLVKCDGAALYYGKRFWLLGVTPSEAQIKDIA 480
Query: 465 EWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKW 524
+WLLE+H+ STGLSTDSL +AGYPGA +LGD VCG+AA KIT+KDFLFWFRSHTAKEIKW
Sbjct: 481 DWLLEHHKDSTGLSTDSLADAGYPGAASLGDEVCGMAAAKITAKDFLFWFRSHTAKEIKW 540
Query: 525 GGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVA 584
GGAKHD KD GRKMHPRSSFKAFLEVVK+RSLPWEDVEMDAIHSLQLILRGS D
Sbjct: 541 GGAKHDPDDKDDGRKMHPRSSFKAFLEVVKRRSLPWEDVEMDAIHSLQLILRGSFHDIDD 600
Query: 585 EDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELT 644
D+K +++ D +++ +DEL + NEMVRLIETA PILAVD+SG +NGWN+K AELT
Sbjct: 601 SDTKTMIHARLNDLKLQGMDELSTVANEMVRLIETATAPILAVDSSGFINGWNAKVAELT 660
Query: 645 GLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
GL V +A+G +L DLV +S D+V+ +L A
Sbjct: 661 GLPVTEAMGRSLAKDLVLQESADMVERLLYLAL 693
>gi|25986847|gb|AAM94954.1| phytochrome [Physcomitrella patens]
Length = 1130
Score = 966 bits (2498), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/681 (68%), Positives = 555/681 (81%), Gaps = 10/681 (1%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTS-N 58
ST K YS SS +SK + RVA QT+ DAKL ++ES FDYS SV+ S ST N
Sbjct: 2 STPKLAYSSGSSVKSKHSVRVA-QTTADAKLQAVYEESGDSGDSFDYSKSVHASKSTGEN 60
Query: 59 VPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
V + V+AYLQR+QRG L+Q FGCM+ V+E NF V+ +SENAPEMLDL P AVP++ QQ+
Sbjct: 61 VSAQAVTAYLQRMQRGGLMQTFGCMLCVEESNFRVIAFSENAPEMLDLMPQAVPSVGQQE 120
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
L +G D RTLFT S AAAL+K A +V +LNPI +HC++SGKPFYAILHRIDVGLVID
Sbjct: 121 VLGIGTDARTLFTPSSAAALEKCAGTVDVTMLNPISVHCRSSGKPFYAILHRIDVGLVID 180
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
EPV +D V++AG L+S+KLAAKAISRLQ+LP G+I LLCD++V EV +L+GYDRVM
Sbjct: 181 FEPVRSNDAIVSSAGVLQSHKLAAKAISRLQALPGGDIGLLCDIVVQEVRELSGYDRVMA 240
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFHEDEHGEV+AE RR DLEPYLG HYPATDIPQASRFL MKNKVRMI DC A PVKVI
Sbjct: 241 YKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMIGDCFASPVKVI 300
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD--NDQEQGRK 356
QDK L QP+SL GSTLRAPHGCHA+YM NM SIASLVM+V +N+ +++ + Q++GRK
Sbjct: 301 QDKDLRQPISLAGSTLRAPHGCHAQYMGNMNSIASLVMAVIVNDPDEDPNARGGQQRGRK 360
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTSPR V FPLR ACEFL+QVFG+Q+N EVEL+AQLREKHILRTQT+LCDML
Sbjct: 361 LWGLVVCHHTSPRTVSFPLRSACEFLMQVFGLQLNMEVELAAQLREKHILRTQTLLCDML 420
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+P+GIV+Q+PN+MDLVKCDGAAL+Y + WLLG+TP + QIK+IA+WLLE+H+ STG
Sbjct: 421 LRDAPIGIVSQSPNIMDLVKCDGAALHYGKRFWLLGITPNDAQIKEIADWLLEHHQDSTG 480
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+AA KITSKDFLFWFRSHTAKEIKWGGAKHD KD
Sbjct: 481 LSTDSLADAGYPGAAQLGDAVCGMAAAKITSKDFLFWFRSHTAKEIKWGGAKHDPDEKDD 540
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
GRKMHPRSSFKAFL VVK+RSLPWED+EMDAIHSLQLILRGS QD D+K +++
Sbjct: 541 GRKMHPRSSFKAFLVVVKRRSLPWEDIEMDAIHSLQLILRGSFQDIDDSDTKTMIHARLN 600
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D +++ +DEL + NEMVRLIETA PILAVD+ G +NGWN+K AELTGL V++A+G +L
Sbjct: 601 DLKLQDMDELSTVANEMVRLIETATAPILAVDSGGFINGWNAKVAELTGLPVEEAMGRSL 660
Query: 657 V-DLVAGDSVDVVKNMLSSAF 676
V DL+ +S+DVV+ +L A
Sbjct: 661 VKDLILNESIDVVQRLLHLAL 681
>gi|302819945|ref|XP_002991641.1| hypothetical protein SELMODRAFT_161807 [Selaginella moellendorffii]
gi|300140490|gb|EFJ07212.1| hypothetical protein SELMODRAFT_161807 [Selaginella moellendorffii]
Length = 1142
Score = 965 bits (2495), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/692 (67%), Positives = 560/692 (80%), Gaps = 21/692 (3%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTS-N 58
ST K YS SSA+SK + RVA QT+ DAKL ++ES FDY+ SVN + ST +
Sbjct: 2 STTKLTYSSGSSAKSKHSVRVA-QTTADAKLHAVYEESGESGDSFDYTKSVNATKSTGES 60
Query: 59 VPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE--Q 116
+P+ V+AYLQR+QRG L+QPFGCM+AV+E +F V+ +S+NA EMLDL P +VP++ Q
Sbjct: 61 IPAQAVTAYLQRMQRGGLVQPFGCMLAVEEGSFRVIAFSDNAGEMLDLMPQSVPSLGAGQ 120
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
QD L +G D R+LFT + A+AL+KAA +V++LNPI +HCKTS KPFYAI+HRIDVGLV
Sbjct: 121 QDLLGIGSDARSLFTPASASALEKAAGAIDVSMLNPISVHCKTSAKPFYAIVHRIDVGLV 180
Query: 177 IDLEPVNPDDVPV-TAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDR 235
+DLEPV D V +AAGAL+S+KLAAKAISRLQSLP G+I LLCD +V EV +LTGYDR
Sbjct: 181 LDLEPVKASDTSVGSAAGALQSHKLAAKAISRLQSLPGGDIGLLCDTVVEEVRELTGYDR 240
Query: 236 VMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPV 295
VM YKFH+DEHGEVVAE RR DLEPYLG HYPATDIPQASRFL MKN+VRMICDC A PV
Sbjct: 241 VMAYKFHDDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMKNRVRMICDCSAAPV 300
Query: 296 KVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDND----- 350
K+ QDK L QP+SL GSTLRAPHGCHA+YM NMGS+ASLVM+V IN+ +DE +
Sbjct: 301 KISQDKDLRQPISLAGSTLRAPHGCHAQYMGNMGSVASLVMAVIINDNDDEYRSSSGGGG 360
Query: 351 -----QEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHI 405
Q++GRKLWG+VVCHHTSPR VPFPLR ACEFL+QVFG+Q+N EVEL+AQLREKHI
Sbjct: 361 GGGAYQQKGRKLWGMVVCHHTSPRSVPFPLRSACEFLMQVFGLQLNMEVELAAQLREKHI 420
Query: 406 LRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAE 465
LRTQT+LCDMLLRD+P+GIV+Q+PN+MDLVKC+GAALYY + WLLGVTP+E QIKDIA+
Sbjct: 421 LRTQTLLCDMLLRDAPIGIVSQSPNIMDLVKCNGAALYYGKRFWLLGVTPSEAQIKDIAD 480
Query: 466 WLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWG 525
WLLE+H+ STGLSTDSL +AGYPGA +LGD VCG+AA KIT+KDFLFWFRSHTAKEIKWG
Sbjct: 481 WLLEHHKDSTGLSTDSLADAGYPGAASLGDEVCGMAAAKITAKDFLFWFRSHTAKEIKWG 540
Query: 526 GAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAE 585
GAKHD KD GRKMHPRSSFKAFLEVVK+RSLPWEDVEMDAIHSLQLILRGS D
Sbjct: 541 GAKHDPDDKDDGRKMHPRSSFKAFLEVVKRRSLPWEDVEMDAIHSLQLILRGSFHDIDDS 600
Query: 586 DSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTG 645
D+K +++ D +++ +DEL + NEMVRLIETA PILAVD+SG +NGWN+K AELTG
Sbjct: 601 DTKTMIHARLNDLKLQGMDELSTVANEMVRLIETATAPILAVDSSGFINGWNAKVAELTG 660
Query: 646 LTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
L V +A+G +L DLV +S D+V+ +L A
Sbjct: 661 LPVTEAMGRSLAKDLVLQESADMVERLLYLAL 692
>gi|2499556|sp|Q40762.1|PHY_PICAB RecName: Full=Phytochrome
gi|1399958|gb|AAB03339.1| phytochrome [Picea abies]
Length = 1136
Score = 965 bits (2495), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 482/674 (71%), Positives = 550/674 (81%), Gaps = 17/674 (2%)
Query: 20 KQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
K +ARV QT +DAKL +F+ S FDY+ S++IS +S+VPS TV AYLQR+Q+ LI
Sbjct: 23 KHSARVITQTPVDAKLQAEFEGSVHSFDYTKSIDISGDSSSVPSETVKAYLQRLQKEMLI 82
Query: 78 QPFGCMIAVDEQNFTVLGYSENAPEMLDL--APHAVPNIEQQDA---------LTLGIDV 126
QPFGC++AV+E + V+GYSENAPEMLD+ HAVP+I Q L +G+D
Sbjct: 83 QPFGCVLAVEEGSCAVVGYSENAPEMLDVVGGAHAVPSIGGQQQEGGGGGGGLLRIGMDA 142
Query: 127 RTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDD 186
RTLF + AAALQKAA F +++L+NPI + C SGKPFYAIL+RID GLVID EPV P D
Sbjct: 143 RTLFKPASAAALQKAATFADMHLVNPIFVRCNRSGKPFYAILNRIDAGLVIDFEPVMPSD 202
Query: 187 VPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEH 246
VPV+AAGAL+SYKLAAKAISRLQSLP G+I LLCD +V EV +LTGYDRVM Y+FHEDEH
Sbjct: 203 VPVSAAGALQSYKLAAKAISRLQSLPGGDIRLLCDTVVQEVRELTGYDRVMAYRFHEDEH 262
Query: 247 GEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQP 306
GEVVAE RRPDLEPYLG HYPATDIPQASRFL MKN+VRMICDC APPV VIQDK+L QP
Sbjct: 263 GEVVAEMRRPDLEPYLGLHYPATDIPQASRFLFMKNRVRMICDCCAPPVNVIQDKRLRQP 322
Query: 307 LSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG----RKLWGLVV 362
LSLCGSTLRAPHGCHA+YM NMGSIASLVMSVT NE D+ + +Q RKLWGLVV
Sbjct: 323 LSLCGSTLRAPHGCHAQYMANMGSIASLVMSVTTNENGDDSEGGGQQQPQNRRKLWGLVV 382
Query: 363 CHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPV 422
CHHTSPR +PFPLRYACEFL+QVFG+Q+NKEVEL+AQLREKHILR Q VLCDMLLRD+PV
Sbjct: 383 CHHTSPRVIPFPLRYACEFLMQVFGIQLNKEVELAAQLREKHILRVQPVLCDMLLRDAPV 442
Query: 423 GIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSL 482
GIV+QTPN+MDLVKCDGAAL Y +LWLLG TPTE QI DIA+WLLE+HR STGLSTDSL
Sbjct: 443 GIVSQTPNIMDLVKCDGAALLYGKRLWLLGTTPTEAQILDIADWLLEHHRDSTGLSTDSL 502
Query: 483 VEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHP 542
EAGYPGA +LGDAVCGIAA +ITSKDFLFWFRSHTAKEI WGGAKHD KD GR+MHP
Sbjct: 503 AEAGYPGAASLGDAVCGIAAARITSKDFLFWFRSHTAKEIIWGGAKHDPNDKDDGRRMHP 562
Query: 543 RSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEK 602
RSSFKAFLEVVK+RSLPWEDVEMDAIHSLQLILR S D DSK +++ D R++
Sbjct: 563 RSSFKAFLEVVKRRSLPWEDVEMDAIHSLQLILRDSFHDIDDSDSKTMIHARLNDLRLQG 622
Query: 603 IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAG 662
IDEL +TNEMVRLIETA VPILA+D++G VNGWN+KAAELTGL D+ IG L+DLV
Sbjct: 623 IDELSAVTNEMVRLIETATVPILAIDSNGLVNGWNTKAAELTGLLADEVIGRPLIDLVQH 682
Query: 663 DSVDVVKNMLSSAF 676
DSV++VK ML A
Sbjct: 683 DSVEIVKKMLYLAL 696
>gi|2499554|sp|Q39557.1|PHY2_CERPU RecName: Full=Phytochrome 2
gi|1314837|gb|AAB67863.1| phytochrome photoreceptor CERPU;PHY0;2 [Ceratodon purpureus]
Length = 1121
Score = 959 bits (2478), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/674 (68%), Positives = 545/674 (80%), Gaps = 9/674 (1%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNV 59
S K YS ++SA+SK + RVA QT+ DA L ++ S FDYS SV S +V
Sbjct: 2 SAPKKTYSSTTSAKSKHSVRVA-QTTADAALEAVYEMSGDSGDSFDYSKSVG--QSAESV 58
Query: 60 PSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDA 119
P+ V+AYLQR+QRG LIQ FGCM+AV+E NF V+ YSENA E LDL P AVP++ + D
Sbjct: 59 PAGAVTAYLQRMQRGGLIQTFGCMVAVEEPNFCVIAYSENASEFLDLMPQAVPSMGEMDV 118
Query: 120 LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDL 179
L +G D+RTLFT S AAL+KAA +++LLNPI +HC+ SGKP YAI HRID+G+VID
Sbjct: 119 LGIGTDIRTLFTPSSGAALEKAAATQDISLLNPITVHCRRSGKPLYAIAHRIDIGIVIDF 178
Query: 180 EPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVY 239
E V +DV V+AAGAL+S+KLAAKAI+RLQ+LP G+I LLCD +V EV +LTGYDRVM Y
Sbjct: 179 EAVKMNDVSVSAAGALQSHKLAAKAITRLQALPGGDIGLLCDTVVEEVRELTGYDRVMAY 238
Query: 240 KFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQ 299
KFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL MKN+VR+I DC A PVK+IQ
Sbjct: 239 KFHEDEHGEVVAEIRRMDLEPYLGLHYPATDIPQASRFLFMKNRVRVIADCCASPVKLIQ 298
Query: 300 DKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWG 359
D + QP+SL GSTLRAPHGCHA+YM NMGSIASLVM+V IN+ E++ ++GRKLWG
Sbjct: 299 DPDIKQPVSLAGSTLRAPHGCHAQYMGNMGSIASLVMAVIINDNEEDSRGAIQRGRKLWG 358
Query: 360 LVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD 419
LVVCHHTSPR VPFPLR ACEFL+QVFG+Q+N EVEL+AQLREKHILRTQT+LCDMLLRD
Sbjct: 359 LVVCHHTSPRTVPFPLRSACEFLMQVFGMQLNMEVELAAQLREKHILRTQTLLCDMLLRD 418
Query: 420 SPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLST 479
+P+GIV+QTPN+MDLVKCDGAALYY + WLLG TPTE QIKDIAEWLLEYH+ STGLST
Sbjct: 419 APIGIVSQTPNIMDLVKCDGAALYYGKRFWLLGTTPTENQIKDIAEWLLEYHKDSTGLST 478
Query: 480 DSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRK 539
DSL +A YPGA LGDAVCG+AA KIT+KDFLFWFRSHTAKE+KWGGAKHD KD GRK
Sbjct: 479 DSLADANYPGAHLLGDAVCGMAAAKITAKDFLFWFRSHTAKEVKWGGAKHDPAEKDDGRK 538
Query: 540 MHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDR 599
MHPRSSFKAFLEVVK+RSLPWEDVEMDAIHSLQLILRGS QD D+K +++ D +
Sbjct: 539 MHPRSSFKAFLEVVKRRSLPWEDVEMDAIHSLQLILRGSFQDIDDSDTKTMIHARLNDLK 598
Query: 600 IEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-D 658
+ +DEL ++ NEMVRLIETA PILAVD++G +NGWN+K A +TGL V +A+G +LV D
Sbjct: 599 LHGMDELSVVANEMVRLIETATAPILAVDSTGMINGWNAKIAHVTGLPVSEAMGRSLVKD 658
Query: 659 LVAGDSVDVVKNML 672
LV +SV VV+ +L
Sbjct: 659 LVLDESVVVVERLL 672
>gi|1674478|gb|AAB19058.1| phytochrome photoreceptor [Ceratodon purpureus]
Length = 1121
Score = 956 bits (2470), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/674 (68%), Positives = 544/674 (80%), Gaps = 9/674 (1%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNV 59
S K YS ++SA+SK + RVA QT+ DA L ++ S FDYS SV S +V
Sbjct: 2 SAPKKTYSSTTSAKSKHSVRVA-QTTADAALEAVYEMSGDSGDSFDYSKSVG--QSAESV 58
Query: 60 PSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDA 119
P+ V+AYLQR+QRG LIQ FGCM+AV+E NF V+ YSENA E LDL P AVP++ + D
Sbjct: 59 PAGAVTAYLQRMQRGGLIQTFGCMVAVEEPNFCVIAYSENASEFLDLMPQAVPSMGEMDV 118
Query: 120 LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDL 179
L +G D+RTLFT S AAL+KAA +++LLNPI +HC+ SGKP YAI HRID+G+VID
Sbjct: 119 LGIGTDIRTLFTPSSGAALEKAAATQDISLLNPITVHCRRSGKPLYAIAHRIDIGIVIDF 178
Query: 180 EPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVY 239
E V +DV V+AAGAL+S+KLAAKAI+RLQ+LP G+I LLCD +V EV +LTGYDRVM Y
Sbjct: 179 EAVKMNDVSVSAAGALQSHKLAAKAITRLQALPGGDIGLLCDTVVEEVRELTGYDRVMAY 238
Query: 240 KFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQ 299
KFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL MKN+VR+I DC A PVK+IQ
Sbjct: 239 KFHEDEHGEVVAEIRRMDLEPYLGLHYPATDIPQASRFLFMKNRVRVIADCCASPVKLIQ 298
Query: 300 DKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWG 359
D + QP+SL GSTLRAPHGCHA+YM NMGSIASLVM+V IN+ E++ ++GRKLWG
Sbjct: 299 DPDIKQPVSLAGSTLRAPHGCHAQYMGNMGSIASLVMAVIINDNEEDSRGAIQRGRKLWG 358
Query: 360 LVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD 419
LVVCHHTSPR VPFPLR ACEFL+QVFG+Q+N EVEL+AQLREKHILRTQT+LCDMLLRD
Sbjct: 359 LVVCHHTSPRTVPFPLRSACEFLMQVFGMQLNMEVELAAQLREKHILRTQTLLCDMLLRD 418
Query: 420 SPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLST 479
+P+GIV+QTPN+MDLVKCDGAALYY + WLLG TPTE QIKDIAEWLLEYH+ STGLST
Sbjct: 419 APIGIVSQTPNIMDLVKCDGAALYYGKRFWLLGTTPTENQIKDIAEWLLEYHKDSTGLST 478
Query: 480 DSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRK 539
DSL + YPGA LGDAVCG+AA KIT+KDFLFWFRSHTAKE+KWGGAKHD KD GRK
Sbjct: 479 DSLADRNYPGAHLLGDAVCGMAAAKITAKDFLFWFRSHTAKEVKWGGAKHDPAEKDDGRK 538
Query: 540 MHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDR 599
MHPRSSFKAFLEVVK+RSLPWEDVEMDAIHSLQLILRGS QD D+K +++ D +
Sbjct: 539 MHPRSSFKAFLEVVKRRSLPWEDVEMDAIHSLQLILRGSFQDIDDSDTKTMIHARLNDLK 598
Query: 600 IEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-D 658
+ +DEL ++ NEMVRLIETA PILAVD++G +NGWN+K A +TGL V +A+G +LV D
Sbjct: 599 LHGMDELSVVANEMVRLIETATAPILAVDSTGMINGWNAKIAHVTGLPVSEAMGRSLVKD 658
Query: 659 LVAGDSVDVVKNML 672
LV +SV VV+ +L
Sbjct: 659 LVLDESVVVVERLL 672
>gi|25986845|gb|AAM94953.1| phytochrome [Physcomitrella patens]
Length = 1123
Score = 942 bits (2434), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/656 (69%), Positives = 532/656 (81%), Gaps = 7/656 (1%)
Query: 27 AQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLIQPFG 81
AQT+ DA L F++S FDYS SV+ S++ S +PS V+AYLQR+QRG L Q FG
Sbjct: 24 AQTTADAALQAVFEKSGDSGDSFDYSKSVSKSTAES-LPSGAVTAYLQRMQRGGLTQSFG 82
Query: 82 CMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKA 141
CMIAV+ F V+ YSENAPE+LDL P AVP++ + D L +G DVRTLFT+S A+L+KA
Sbjct: 83 CMIAVEGTGFRVIAYSENAPEILDLVPQAVPSVGEMDTLRIGTDVRTLFTASSVASLEKA 142
Query: 142 ANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLA 201
A E++LLNPI ++C+ SGK YAI HRID+G+VID E V DD V+AAGAL+S+KLA
Sbjct: 143 AEAQEMSLLNPITVNCRRSGKQLYAIAHRIDIGIVIDFEAVKTDDHLVSAAGALQSHKLA 202
Query: 202 AKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPY 261
AKAI+RLQ+LP GNI LLCD +V EV +LTGYDRVM Y+FHEDEHGEVVAE RR DLEPY
Sbjct: 203 AKAITRLQALPGGNIGLLCDTVVEEVRELTGYDRVMAYRFHEDEHGEVVAEIRRADLEPY 262
Query: 262 LGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCH 321
LG HYP TDIPQASRFL MKNKVR+I DC APPVKVIQD L QP+SL GSTLR+PHGCH
Sbjct: 263 LGLHYPGTDIPQASRFLFMKNKVRIIADCSAPPVKVIQDPTLRQPVSLAGSTLRSPHGCH 322
Query: 322 ARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEF 381
A+YM NMGSIASLVM+V IN+ E++ ++GRKLWGLVVCHHTSPR VPFPLR AC F
Sbjct: 323 AQYMGNMGSIASLVMAVIINDNEEDSHGSVQRGRKLWGLVVCHHTSPRTVPFPLRSACGF 382
Query: 382 LIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAA 441
L+QVFG+Q+N EVEL+AQLREKHILRTQT+LCDMLLRD+P+GIV+Q PN+MDLVKCDGAA
Sbjct: 383 LMQVFGLQLNMEVELAAQLREKHILRTQTLLCDMLLRDAPIGIVSQIPNIMDLVKCDGAA 442
Query: 442 LYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIA 501
LYY + WLLG TPTE QIKDIAEWLLEYH+ STGLSTDSL +A YP A LGDAVCG+A
Sbjct: 443 LYYGKRFWLLGTTPTESQIKDIAEWLLEYHKDSTGLSTDSLADANYPAAHLLGDAVCGMA 502
Query: 502 AVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWE 561
A KIT+KDFLFWFRSHTAKEIKWGGAKHD G KD GRKMHPRSSFKAFLEVVK+RSLPWE
Sbjct: 503 AAKITAKDFLFWFRSHTAKEIKWGGAKHDPGEKDDGRKMHPRSSFKAFLEVVKRRSLPWE 562
Query: 562 DVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAA 621
DVEMDAIHSLQLILRGS QD D+K +++ D ++ +DEL ++ NEMVRLIETA
Sbjct: 563 DVEMDAIHSLQLILRGSFQDIDDSDTKTMIHARLNDLKLHDMDELSVVANEMVRLIETAT 622
Query: 622 VPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
PILAVD++G +NGWN+K A++TGL V +A G +LV DLV +SV VV+ +L A
Sbjct: 623 APILAVDSNGMINGWNAKIAQVTGLPVSEAHGRSLVKDLVTDESVAVVERLLYLAL 678
>gi|168051425|ref|XP_001778155.1| phytochrome 1 [Physcomitrella patens subsp. patens]
gi|139001617|dbj|BAF51707.1| phytochrome1 [Physcomitrella patens]
gi|162670477|gb|EDQ57045.1| phytochrome 1 [Physcomitrella patens subsp. patens]
Length = 1123
Score = 941 bits (2433), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/656 (68%), Positives = 533/656 (81%), Gaps = 7/656 (1%)
Query: 27 AQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLIQPFG 81
AQT+ DA L F++S FDYS SV+ S++ S +PS V+AYLQR+QRG L Q FG
Sbjct: 24 AQTTADAALQAVFEKSGDSGDSFDYSKSVSKSTAES-LPSGAVTAYLQRMQRGGLTQSFG 82
Query: 82 CMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKA 141
CMIAV+ F V+ YSENAPE+LDL P AVP++ + D L +G DVRTLFT+S A+L+KA
Sbjct: 83 CMIAVEGTGFRVIAYSENAPEILDLVPQAVPSVGEMDTLRIGTDVRTLFTASSVASLEKA 142
Query: 142 ANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLA 201
A E++LLNPI ++C+ SGK YAI HRID+G+VID E V DD V+AAGAL+S+KLA
Sbjct: 143 AEAQEMSLLNPITVNCRRSGKQLYAIAHRIDIGIVIDFEAVKTDDHLVSAAGALQSHKLA 202
Query: 202 AKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPY 261
AKAI+RLQ+LP G+I LLCD +V EV +LTGYDRVM Y+FHEDEHGEVVAE RR DLEPY
Sbjct: 203 AKAITRLQALPGGDIGLLCDTVVEEVRELTGYDRVMAYRFHEDEHGEVVAEIRRADLEPY 262
Query: 262 LGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCH 321
LG HYP TDIPQASRFL MKNKVR+I DC APPVKVIQD L QP+SL GSTLR+PHGCH
Sbjct: 263 LGLHYPGTDIPQASRFLFMKNKVRIIADCSAPPVKVIQDPTLRQPVSLAGSTLRSPHGCH 322
Query: 322 ARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEF 381
A+YM NMGSIASLVM+V IN+ E++ ++GRKLWGLVVCHHTSPR VPFPLR AC F
Sbjct: 323 AQYMGNMGSIASLVMAVIINDNEEDSHGSVQRGRKLWGLVVCHHTSPRTVPFPLRSACGF 382
Query: 382 LIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAA 441
L+QVFG+Q+N EVEL+AQLREKHILRTQT+LCDMLLRD+P+GIV+Q PN+MDLVKCDGAA
Sbjct: 383 LMQVFGLQLNMEVELAAQLREKHILRTQTLLCDMLLRDAPIGIVSQIPNIMDLVKCDGAA 442
Query: 442 LYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIA 501
LYY + WLLG TPTE QIKDIAEWLLEYH+ STGLSTDSL +A YP A LGDAVCG+A
Sbjct: 443 LYYGKRFWLLGTTPTESQIKDIAEWLLEYHKDSTGLSTDSLADANYPAAHLLGDAVCGMA 502
Query: 502 AVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWE 561
A KIT+KDFLFWFRSHTAKEIKWGGAKHD G KD GRKMHPRSSFKAFLEVVK+RSLPWE
Sbjct: 503 AAKITAKDFLFWFRSHTAKEIKWGGAKHDPGEKDDGRKMHPRSSFKAFLEVVKRRSLPWE 562
Query: 562 DVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAA 621
DVEMDAIHSLQLILRGS QD D+K +++ D ++ +DEL ++ NEMVRLIETA
Sbjct: 563 DVEMDAIHSLQLILRGSFQDIDDSDTKTMIHARLNDLKLHDMDELSVVANEMVRLIETAT 622
Query: 622 VPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
PILAVD++G +NGWN+K A++TGL V +A+G +LV DLV +SV VV+ +L A
Sbjct: 623 APILAVDSNGMINGWNAKIAQVTGLPVSEAMGRSLVKDLVTDESVAVVERLLYLAL 678
>gi|168003331|ref|XP_001754366.1| phytochrome 5c [Physcomitrella patens subsp. patens]
gi|162694468|gb|EDQ80816.1| phytochrome 5c [Physcomitrella patens subsp. patens]
Length = 1124
Score = 940 bits (2429), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/680 (65%), Positives = 550/680 (80%), Gaps = 10/680 (1%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD-----FDYSTSVN--ISSSTS 57
++ K +YS ++ +SK + RV QT+ DAKL ++ES+ F+YS SV ++
Sbjct: 2 TSTKLSYSLGTTVKSKHSVRVQ-QTTADAKLQAVYEESNDSGDAFNYSKSVGQAAKATVQ 60
Query: 58 NVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQ 117
VP+ VS+YLQR+QRG L Q FGCM+AV+E F V+ YSENAPEMLDL PHAVP++ QQ
Sbjct: 61 QVPAQAVSSYLQRMQRGGLTQTFGCMLAVEESTFRVIAYSENAPEMLDLVPHAVPSVGQQ 120
Query: 118 DALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVI 177
D L +G D R+LFT S A+AL++AA+ +++++NPI +H ++SGKPFYAI+HRIDVG+VI
Sbjct: 121 DVLGIGADARSLFTPSSASALERAASTSDLSMVNPISVHSRSSGKPFYAIVHRIDVGVVI 180
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P+DV ++ AGAL S+KLAAKA++RLQSLP G+I LLCD +V EV +LTGYDRVM
Sbjct: 181 DFEPVRPNDVIISTAGALHSHKLAAKAVARLQSLPGGDIGLLCDAVVEEVRELTGYDRVM 240
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+DEHGEV+AE RR DLE YLG HYP+TDIPQASRFL MKN+VRMI DC APPVKV
Sbjct: 241 AYKFHDDEHGEVLAEIRRSDLESYLGLHYPSTDIPQASRFLFMKNRVRMIADCCAPPVKV 300
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKL 357
IQDK L QP++L GSTLRAPHGCHA+YM NMGS+AS+ ++V +N+ E++ Q++GR+L
Sbjct: 301 IQDKDLRQPITLAGSTLRAPHGCHAQYMGNMGSVASITLAVIVNDQEEDF-GVQQKGRRL 359
Query: 358 WGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLL 417
WGLVVCHHTS R + FPLR ACEFL+QVFG+Q+N EVEL AQ++EKHILRTQT+LCDMLL
Sbjct: 360 WGLVVCHHTSARTISFPLRSACEFLMQVFGLQLNMEVELQAQVKEKHILRTQTLLCDMLL 419
Query: 418 RDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGL 477
RD+P+GIV+Q+PN+MDLVKCDGAALYY + WLLG TPTE+QI +IA+WLLEYH+ STGL
Sbjct: 420 RDAPIGIVSQSPNIMDLVKCDGAALYYGKRFWLLGTTPTEQQITEIADWLLEYHKDSTGL 479
Query: 478 STDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGG 537
STDSL +AGYPGA LGDAVCG+AA +IT KDFLFWFRSHTAKEIKWGGAKHD+ KD G
Sbjct: 480 STDSLADAGYPGANLLGDAVCGMAAARITPKDFLFWFRSHTAKEIKWGGAKHDADEKDDG 539
Query: 538 RKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVD 597
RKM PRSSF AFLEVVK+RS+PWED+EMDAIHSLQLILRGS QD D K +++ D
Sbjct: 540 RKMAPRSSFNAFLEVVKRRSVPWEDIEMDAIHSLQLILRGSFQDIDDSDGKTMIHARLHD 599
Query: 598 DRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV 657
+++ +DEL + NEMVRLIETA VPILAVD+SG +NGWN+K AELTGL V A+G +LV
Sbjct: 600 LKLQGMDELSTVANEMVRLIETATVPILAVDSSGFINGWNAKVAELTGLPVGDAMGRSLV 659
Query: 658 -DLVAGDSVDVVKNMLSSAF 676
DL+ +SV+ V+ +L A
Sbjct: 660 KDLILEESVEAVERLLYLAL 679
>gi|168017219|ref|XP_001761145.1| phytochrome 5a [Physcomitrella patens subsp. patens]
gi|162687485|gb|EDQ73867.1| phytochrome 5a [Physcomitrella patens subsp. patens]
Length = 1123
Score = 940 bits (2429), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/680 (65%), Positives = 545/680 (80%), Gaps = 11/680 (1%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD-----FDYSTSVN--ISSSTS 57
++ K YS S +SK + RV QT+ DAKL ++ES+ FDYS SV S+
Sbjct: 2 ASAKLAYSTGSGIKSKHSVRVQ-QTTADAKLQAAYEESNDSGDSFDYSKSVGQAAKSTVQ 60
Query: 58 NVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQ 117
VP+ V+AYLQR+QRG L Q FGCM+AV+E F V+ YSENA +MLDL P AVP++ QQ
Sbjct: 61 QVPAQAVTAYLQRMQRGGLTQTFGCMLAVEENTFRVIAYSENALDMLDLMPQAVPSVGQQ 120
Query: 118 DALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVI 177
D L +G D R+LFT S AAAL++A +++++NP+ +H ++SGKPFYAILHRIDVG+V+
Sbjct: 121 DVLGIGTDSRSLFTPSSAAALERATQQSDLSMVNPVSVHSRSSGKPFYAILHRIDVGIVM 180
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P+DV V++AG + S+KLAAKAISRLQSLP G+I LLCD +V EV +LTGYDRVM
Sbjct: 181 DFEPVRPNDVVVSSAGTIHSHKLAAKAISRLQSLPGGDIGLLCDTVVEEVRELTGYDRVM 240
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFHEDEHGEV+AE RR DLEPYLG HYPATDIPQASRFL MKN+ RMI DC APPVKV
Sbjct: 241 AYKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMKNRFRMIVDCYAPPVKV 300
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKL 357
IQDK L QPL+L GSTLRAPHGCHA+YM NMGSIAS+ M+V +N+ ED D ++ R+L
Sbjct: 301 IQDKDLRQPLTLAGSTLRAPHGCHAQYMGNMGSIASVTMAVVVNDQED--DGGSQKARRL 358
Query: 358 WGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLL 417
WGLVVCHHTS R + FPLR ACEFL+QVFG+Q+N EVEL+AQLREKHILRTQT+LCDMLL
Sbjct: 359 WGLVVCHHTSARMISFPLRSACEFLMQVFGLQLNMEVELAAQLREKHILRTQTLLCDMLL 418
Query: 418 RDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGL 477
RD+P+GIV+Q+PN+MDLVKCDGAALYY + WLLG+TP+E+QIK+IA+WLLE H+ STGL
Sbjct: 419 RDAPIGIVSQSPNIMDLVKCDGAALYYGNRFWLLGITPSEQQIKEIADWLLECHKDSTGL 478
Query: 478 STDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGG 537
STDSL +AGYPGA LGDAVCG+AA +IT KDFLFWFRSHTAKEIKWGGAKHD+ +D G
Sbjct: 479 STDSLADAGYPGANLLGDAVCGMAAARITPKDFLFWFRSHTAKEIKWGGAKHDADDRDDG 538
Query: 538 RKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVD 597
RKM PRSSF AFLEVVK+RS+PWED+EMDAIHSLQLILRGS QD D+K +++ D
Sbjct: 539 RKMTPRSSFNAFLEVVKRRSVPWEDIEMDAIHSLQLILRGSFQDIDDSDTKTMIHARLND 598
Query: 598 DRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV 657
+++ +DEL + NEMVRLIETA PILAVD+SG +NGWN+K AELTGL+V A+G +LV
Sbjct: 599 LKLQGMDELSTVANEMVRLIETATTPILAVDSSGFINGWNAKVAELTGLSVGDAMGRSLV 658
Query: 658 -DLVAGDSVDVVKNMLSSAF 676
DL+ +SV+ V+ +L A
Sbjct: 659 KDLILEESVEDVQRLLYLAL 678
>gi|168027033|ref|XP_001766035.1| phytochrome 3 [Physcomitrella patens subsp. patens]
gi|162682678|gb|EDQ69094.1| phytochrome 3 [Physcomitrella patens subsp. patens]
Length = 1123
Score = 937 bits (2423), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/656 (68%), Positives = 535/656 (81%), Gaps = 8/656 (1%)
Query: 27 AQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLIQPFG 81
AQT+ DA L F++S +FDYS SV+ S++ S + + V+AYLQR+QRG L Q FG
Sbjct: 24 AQTTADAALHAVFEKSGVSGDNFDYSKSVSKSTAGS-LHTGAVTAYLQRMQRGGLTQSFG 82
Query: 82 CMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKA 141
CM+AV+E F V+ YSENAPE LDL P AVPNI + + L +G DVRTLFT S AA+L+KA
Sbjct: 83 CMVAVEETGFRVIAYSENAPEFLDLMPQAVPNIGEINTLGIGTDVRTLFTPSSAASLEKA 142
Query: 142 ANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLA 201
A E++LLNPI ++C+ S KP YAI HRID+G+VID E VN +DV ++A GAL+S+KLA
Sbjct: 143 AETQEISLLNPITVYCR-SKKPLYAIAHRIDIGIVIDFEAVNMNDVTISADGALQSHKLA 201
Query: 202 AKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPY 261
AKAI+RLQ+LP G+I LLCD +V EV +LTGYDRVM YKFHEDEHGEVVAE RR DLEPY
Sbjct: 202 AKAITRLQALPGGDIGLLCDTVVEEVRELTGYDRVMAYKFHEDEHGEVVAEIRRTDLEPY 261
Query: 262 LGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCH 321
LG HYPATDIPQASRFL MKN+VRMI DC APPVK++QD L QP+SL GSTLR+PHGCH
Sbjct: 262 LGLHYPATDIPQASRFLFMKNRVRMIGDCSAPPVKIVQDPNLRQPVSLAGSTLRSPHGCH 321
Query: 322 ARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEF 381
A+YM NMGSI+S+VM+V IN+ ED+ ++GRKLWGLVVCHHTSPR VPFPLR ACEF
Sbjct: 322 AQYMGNMGSISSIVMAVIINDNEDDSRGSVQRGRKLWGLVVCHHTSPRTVPFPLRSACEF 381
Query: 382 LIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAA 441
L+QVFG+Q+N EVEL+AQLREKHILRTQT+LCDMLLRD+P+GIV+Q PN+MDLVKCDGAA
Sbjct: 382 LMQVFGLQLNMEVELAAQLREKHILRTQTLLCDMLLRDAPIGIVSQVPNIMDLVKCDGAA 441
Query: 442 LYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIA 501
LYY + WLLG TPTE QIKDIAEWLLEYH+ STGLSTDSL +A YP A LGDAVCG+A
Sbjct: 442 LYYGKRFWLLGTTPTESQIKDIAEWLLEYHKDSTGLSTDSLADANYPAAHLLGDAVCGMA 501
Query: 502 AVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWE 561
A KITSKDFLFWFRSHTAKEIKWGGAKHD G KD RKMHPRSSFKAFLEVVK+RSLPWE
Sbjct: 502 AAKITSKDFLFWFRSHTAKEIKWGGAKHDPGEKDDNRKMHPRSSFKAFLEVVKRRSLPWE 561
Query: 562 DVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAA 621
DVEMDAIHSLQLILRGS QD D+K +++ D ++ +DEL I+ NEMVRLIETA
Sbjct: 562 DVEMDAIHSLQLILRGSFQDIDDSDTKTMIHARLNDLKLHDMDELSIVANEMVRLIETAT 621
Query: 622 VPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
PILAVD++G +NGWN+K A+ TGL V +A+G +LV DLV +S++VV+ +L A
Sbjct: 622 APILAVDSNGMINGWNAKIAQETGLPVAEAMGRSLVKDLVMDESLEVVERLLYLAL 677
>gi|139001625|dbj|BAF51709.1| phytochrome3 [Physcomitrella patens]
Length = 1122
Score = 937 bits (2422), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/656 (68%), Positives = 535/656 (81%), Gaps = 8/656 (1%)
Query: 27 AQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLIQPFG 81
AQT+ DA L F++S +FDYS SV+ S++ S + + V+AYLQR+QRG L Q FG
Sbjct: 24 AQTTADAALHAVFEKSGVSGDNFDYSKSVSKSTAGS-LHTGAVTAYLQRMQRGGLTQSFG 82
Query: 82 CMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKA 141
CM+AV+E F V+ YSENAPE LDL P AVPNI + + L +G DVRTLFT S AA+L+KA
Sbjct: 83 CMVAVEETGFRVIAYSENAPEFLDLMPQAVPNIGEINTLGIGTDVRTLFTPSSAASLEKA 142
Query: 142 ANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLA 201
A E++LLNPI ++C+ S KP YAI HRID+G+VID E VN +DV ++A GAL+S+KLA
Sbjct: 143 AETQEISLLNPITVYCR-SKKPLYAIAHRIDIGIVIDFEAVNMNDVTISADGALQSHKLA 201
Query: 202 AKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPY 261
AKAI+RLQ+LP G+I LLCD +V EV +LTGYDRVM YKFHEDEHGEVVAE RR DLEPY
Sbjct: 202 AKAITRLQALPGGDIGLLCDTVVEEVRELTGYDRVMAYKFHEDEHGEVVAEIRRTDLEPY 261
Query: 262 LGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCH 321
LG HYPATDIPQASRFL MKN+VRMI DC APPVK++QD L QP+SL GSTLR+PHGCH
Sbjct: 262 LGLHYPATDIPQASRFLFMKNRVRMIGDCSAPPVKIVQDPNLRQPVSLAGSTLRSPHGCH 321
Query: 322 ARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEF 381
A+YM NMGSI+S+VM+V IN+ ED+ ++GRKLWGLVVCHHTSPR VPFPLR ACEF
Sbjct: 322 AQYMGNMGSISSIVMAVIINDNEDDSRGSVQRGRKLWGLVVCHHTSPRTVPFPLRSACEF 381
Query: 382 LIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAA 441
L+QVFG+Q+N EVEL+AQLREKHILRTQT+LCDMLLRD+P+GIV+Q PN+MDLVKCDGAA
Sbjct: 382 LMQVFGLQLNMEVELAAQLREKHILRTQTLLCDMLLRDAPIGIVSQVPNIMDLVKCDGAA 441
Query: 442 LYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIA 501
LYY + WLLG TPTE QIKDIAEWLLEYH+ STGLSTDSL +A YP A LGDAVCG+A
Sbjct: 442 LYYGKRFWLLGTTPTESQIKDIAEWLLEYHKDSTGLSTDSLADANYPAAHLLGDAVCGMA 501
Query: 502 AVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWE 561
A KITSKDFLFWFRSHTAKEIKWGGAKHD G KD RKMHPRSSFKAFLEVVK+RSLPWE
Sbjct: 502 AAKITSKDFLFWFRSHTAKEIKWGGAKHDPGEKDDNRKMHPRSSFKAFLEVVKRRSLPWE 561
Query: 562 DVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAA 621
DVEMDAIHSLQLILRGS QD D+K +++ D ++ +DEL I+ NEMVRLIETA
Sbjct: 562 DVEMDAIHSLQLILRGSFQDIDDSDTKTMIHARLNDLKLHDMDELSIVANEMVRLIETAT 621
Query: 622 VPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
PILAVD++G +NGWN+K A+ TGL V +A+G +LV DLV +S++VV+ +L A
Sbjct: 622 APILAVDSNGMINGWNAKIAQETGLPVAEAMGRSLVKDLVMDESLEVVERLLYLAL 677
>gi|33333480|gb|AAQ11873.1| phytochrome C [Stellaria longipes]
Length = 1114
Score = 936 bits (2420), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/664 (68%), Positives = 544/664 (81%), Gaps = 9/664 (1%)
Query: 21 QNARVAAQTSIDAKLAEDFDESD--FDYSTSV--NISSSTSNVPSSTVSAYLQRVQRGRL 76
+A V QT +DA+LA DF++S+ F+Y++SV N+ +S+S+VPSSTV +YLQ+VQRG L
Sbjct: 15 HDAHVVIQTPVDAQLASDFEQSERVFNYTSSVDLNLLASSSDVPSSTVKSYLQKVQRGGL 74
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQ FGC+IA+DE+NF V+ YSENAPEMLDL PH VPNIEQ +ALT G DV TLFTSSG +
Sbjct: 75 IQSFGCLIAIDEKNFKVIAYSENAPEMLDLTPHTVPNIEQLEALTFGTDVATLFTSSGVS 134
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
ALQKA N+ E+NLLNPIL+H K SGKPFYAILHRI VGLV+DLE VN + V +GAL
Sbjct: 135 ALQKAVNYSELNLLNPILVHSKNSGKPFYAILHRIKVGLVLDLETVNLAETLVGVSGALM 194
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
SYKLAAKAIS+LQSLPS NI LLCDVLV EV +LTGYDRVMVYKFH+D+HGEV+ E P
Sbjct: 195 SYKLAAKAISKLQSLPSQNIPLLCDVLVKEVRELTGYDRVMVYKFHDDQHGEVIGESHSP 254
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
L+ YLG HYPATDIPQASRFL +KNKVRMICDC +P VKVIQD+ L QPLSL GSTLRA
Sbjct: 255 SLDSYLGLHYPATDIPQASRFLFLKNKVRMICDCRSPSVKVIQDEALTQPLSLGGSTLRA 314
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+VTIN EDE+ +D+ + RKLWGLVVCHHTS RFVP+PLR
Sbjct: 315 PHGCHAQYMANMGSIASLVMAVTINNEEDEV-SDRHRTRKLWGLVVCHHTSSRFVPYPLR 373
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+QVFG+ +NKEVEL+AQ+REKHIL+ Q++LCDML+RDSP+ I+TQ+PNVMDLVK
Sbjct: 374 YACEFLVQVFGIHINKEVELAAQVREKHILKIQSMLCDMLMRDSPITIITQSPNVMDLVK 433
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAAL Y+ KLW+LG+TP QIKDI++WL EYH + GL TDSL EAGYPGAL LGDA
Sbjct: 434 CDGAALLYQSKLWVLGITPKSNQIKDISQWLFEYHGNTKGLITDSLKEAGYPGALELGDA 493
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AAV+I+S++ LFWFRSHTAKEIKWGGAKH+ G D MHPRSSF AFL+VVK R
Sbjct: 494 VCGMAAVRISSEEMLFWFRSHTAKEIKWGGAKHEPGQNDERGIMHPRSSFNAFLDVVKWR 553
Query: 557 SLPWEDVEMDAIHSLQLILRGSL--QDEVAEDSKMIVNVPSVDDRIEKIDELRI--ITNE 612
S+PWED+EMD+I+SLQLI L +++ SKMIVNVP V L++ +T E
Sbjct: 554 SVPWEDMEMDSIYSLQLIFIKCLVKNKTMSDTSKMIVNVPGVGVGGPLSSALKVEPLTGE 613
Query: 613 MVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNML 672
++RLIETAAVPI +VD +G +NGWN K AELTG+ ++Q IG+ LVD+V +V+V+KN+L
Sbjct: 614 VIRLIETAAVPIFSVDVTGAINGWNFKVAELTGVPMEQVIGSQLVDVVVEGTVEVLKNIL 673
Query: 673 SSAF 676
SSA
Sbjct: 674 SSAL 677
>gi|548512|sp|P36505.1|PHY1_PHYPA RecName: Full=Phytochrome 1
gi|402606|emb|CAA52933.1| phytochrome [Physcomitrella patens]
Length = 1132
Score = 933 bits (2412), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/656 (68%), Positives = 528/656 (80%), Gaps = 7/656 (1%)
Query: 27 AQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLIQPFG 81
AQT+ DA L F++S FDYS SV+ S++ S +PS V+AYLQR+QRG L Q FG
Sbjct: 24 AQTTADAALQAVFEKSGDSGDSFDYSKSVSKSTAES-LPSGAVTAYLQRMQRGGLTQSFG 82
Query: 82 CMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKA 141
CMIAV+ F V+ YSENAPE+LDL P AVP++ + D L +G DVRTLFT+S A+L+KA
Sbjct: 83 CMIAVEGTGFRVIAYSENAPEILDLVPQAVPSVGEMDTLRIGTDVRTLFTASSVASLEKA 142
Query: 142 ANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLA 201
A E++LLNPI ++C+ SGK YAI HRID+G+VID E V DD V+AAGAL+S+KLA
Sbjct: 143 AEAQEMSLLNPITVNCRRSGKQLYAIAHRIDIGIVIDFEAVKTDDHLVSAAGALQSHKLA 202
Query: 202 AKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPY 261
AKAI+RLQ+LP GNI LLCD +V EV +LTGYDRVM Y+FHEDEHGEVVAE RR DLEPY
Sbjct: 203 AKAITRLQALPGGNIGLLCDTVVEEVRELTGYDRVMAYRFHEDEHGEVVAEIRRADLEPY 262
Query: 262 LGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCH 321
LG HYP TDIPQASRFL MKNKVR+I DC APPVKVIQD L QP+SL GSTLR+PHGCH
Sbjct: 263 LGLHYPGTDIPQASRFLFMKNKVRIIADCSAPPVKVIQDPTLRQPVSLAGSTLRSPHGCH 322
Query: 322 ARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEF 381
A+YM NMGSIASLVM+V IN+ E++ ++GRKLWGLVVCHHTSPR VPFPLR AC F
Sbjct: 323 AQYMGNMGSIASLVMAVIINDNEEDSHGSVQRGRKLWGLVVCHHTSPRTVPFPLRSACGF 382
Query: 382 LIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAA 441
L+QVFG+Q+N EVE +AQLREKHILRTQT+LCDMLLRD+P+GIV+Q PN+MDLVKCDGAA
Sbjct: 383 LMQVFGLQLNMEVESAAQLREKHILRTQTLLCDMLLRDAPIGIVSQIPNIMDLVKCDGAA 442
Query: 442 LYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIA 501
LYY WLLG TPTE QIKDIAEWLLEYH+ STGLSTDSL +A YP A LGDAVCG+A
Sbjct: 443 LYYGKPFWLLGTTPTESQIKDIAEWLLEYHKDSTGLSTDSLADANYPAAHLLGDAVCGMA 502
Query: 502 AVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWE 561
A KIT+KDFLFWFRSHTAKEIKWGGAKHD G GRKMHPRSSFKAFLEVVK+RSLPWE
Sbjct: 503 AAKITAKDFLFWFRSHTAKEIKWGGAKHDPGENHDGRKMHPRSSFKAFLEVVKRRSLPWE 562
Query: 562 DVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAA 621
DVEMDAIHSLQLILRGS QD D+K +++ D ++ +DEL ++ NEMVRLIETA
Sbjct: 563 DVEMDAIHSLQLILRGSFQDIADSDTKTMIHARLNDLKLHDMDELSVVANEMVRLIETAT 622
Query: 622 VPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
PILAVD++G +NGWN+K A++TGL V +A G +LV DLV +SV VV+ +L A
Sbjct: 623 APILAVDSNGMINGWNAKIAQVTGLPVSEAHGRSLVKDLVTDESVAVVERLLYLAL 678
>gi|25986849|gb|AAM94955.1| phytochrome [Physcomitrella patens]
Length = 1122
Score = 929 bits (2401), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/656 (68%), Positives = 531/656 (80%), Gaps = 8/656 (1%)
Query: 27 AQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLIQPFG 81
AQT+ DA L F++S +FDYS SV+ S++ S + + V+AYLQR+QRG L Q FG
Sbjct: 24 AQTTADAALHAVFEKSGVSGDNFDYSKSVSKSTAGS-LHTGAVTAYLQRMQRGGLTQSFG 82
Query: 82 CMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKA 141
CM+AV+E F V+ YSENAPE LDL P AVPNI + + L +G DVRTLFT S AA+L+KA
Sbjct: 83 CMVAVEETGFRVIAYSENAPEFLDLMPQAVPNIGEINTLGIGTDVRTLFTPSSAASLEKA 142
Query: 142 ANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLA 201
A E++LLNPI ++C+ S KP YAI HRID+G+VID E VN +DV ++A GAL+S+KLA
Sbjct: 143 AETQEISLLNPITVYCR-SKKPLYAIAHRIDIGIVIDFEAVNMNDVTISADGALQSHKLA 201
Query: 202 AKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPY 261
AKAI+RLQ+LP G+I LLCD +V EV +LTGYDRVM YKFHEDEHGEVVAE RR DLEPY
Sbjct: 202 AKAITRLQALPGGDIGLLCDTVVEEVRELTGYDRVMAYKFHEDEHGEVVAEIRRTDLEPY 261
Query: 262 LGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCH 321
LG HYPATDIPQASRFL MKN+VRMI DC APP K++QD L QP+SL GSTLR+PHGCH
Sbjct: 262 LGLHYPATDIPQASRFLFMKNRVRMIGDCSAPPEKIVQDPNLRQPVSLAGSTLRSPHGCH 321
Query: 322 ARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEF 381
A+YM NMGSI+S+VM+V IN+ ED+ ++GRK WGLVVCHHTSPR VPFPLR ACEF
Sbjct: 322 AQYMGNMGSISSIVMAVIINDNEDDSRGSVQRGRKQWGLVVCHHTSPRTVPFPLRSACEF 381
Query: 382 LIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAA 441
L+QVFG+Q+N EVEL+AQLREKHILRTQT+LCDMLLRD+P GIV+Q PN+MDLVKCDGAA
Sbjct: 382 LMQVFGLQLNMEVELAAQLREKHILRTQTLLCDMLLRDAPTGIVSQVPNIMDLVKCDGAA 441
Query: 442 LYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIA 501
LYY + WLLG TPTE QIKDIAEWLLEYH+ STGLSTDSL +A YP A LGDAVCG+A
Sbjct: 442 LYYGKRFWLLGTTPTESQIKDIAEWLLEYHKDSTGLSTDSLADANYPAAHLLGDAVCGMA 501
Query: 502 AVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWE 561
A KITSKDFLFWFRSHTAKEIKWGGAKHD G KD RKMHPRS FKAFLEVVK+RSLPWE
Sbjct: 502 AAKITSKDFLFWFRSHTAKEIKWGGAKHDPGEKDDNRKMHPRSPFKAFLEVVKRRSLPWE 561
Query: 562 DVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAA 621
DVEMDAIHSLQLILRGS QD D+K +++ D ++ +DEL I+ NEMVRLIETA
Sbjct: 562 DVEMDAIHSLQLILRGSFQDIDDSDTKTMIHARLNDLKLHDMDELSIVANEMVRLIETAT 621
Query: 622 VPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
PILAVD++G +NGWN+K A+ TGL V +A+G +LV DLV +S++VV+ +L A
Sbjct: 622 APILAVDSNGMINGWNAKIAQETGLPVAEAMGRSLVKDLVMDESLEVVERLLYLAL 677
>gi|400792|sp|Q01549.1|PHY1_SELMA RecName: Full=Phytochrome 1
gi|22603|emb|CAA43698.1| phytochrome [Selaginella martensii]
Length = 1134
Score = 928 bits (2398), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/686 (66%), Positives = 550/686 (80%), Gaps = 17/686 (2%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTS-N 58
ST K YS SSA+SK + RVA QT+ DAKL ++ES FDYS S+N + ST
Sbjct: 2 STTKLTYSSGSSAKSKHSVRVA-QTTADAKLHAVYEESGESGDSFDYSKSINATKSTGET 60
Query: 59 VPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE--Q 116
+P+ V+AYLQR+QRG L+QPFGCM+AV+E +F V+ +S+NA EMLDL P +VP++ Q
Sbjct: 61 IPAQAVTAYLQRMQRGGLVQPFGCMLAVEEGSFRVIAFSDNAGEMLDLMPQSVPSLGSGQ 120
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
QD LT+G D RTLFT++ +A + A ++++LNPI + KTS KPFYAI+HRIDVGLV
Sbjct: 121 QDVLTIGTDARTLFTAAASALEKAAGAV-DLSMLNPIWVQSKTSAKPFYAIVHRIDVGLV 179
Query: 177 IDLEPVNPDDVPV-TAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDR 235
+DLEPV D V +AAGAL+S+KLAAKAISRLQSLP G+I LLCD +V EV D+TGYD
Sbjct: 180 MDLEPVKASDTRVGSAAGALQSHKLAAKAISRLQSLPGGDIGLLCDTVVEEVRDVTGYDL 239
Query: 236 VMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPV 295
VM YKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL MKN+VRMICDC APPV
Sbjct: 240 VMAYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMKNRVRMICDCSAPPV 299
Query: 296 KVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAED----ELDNDQ 351
K+ QDK+L QP+SL GSTLRAPHGCHA+YM NMGS+ASLVM++ IN+ ++ Q
Sbjct: 300 KITQDKELRQPISLAGSTLRAPHGCHAQYMGNMGSVASLVMAMIINDNDEPSGGGGGGGQ 359
Query: 352 EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTV 411
+GR+LWGLVVCHHTSPR VPF LR ACEFL+QVFG+Q+N E ++A +REKHILRTQT+
Sbjct: 360 HKGRRLWGLVVCHHTSPRSVPF-LRSACEFLMQVFGLQLNMEAAVAAHVREKHILRTQTL 418
Query: 412 LCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYH 471
LCDMLLRD+P+GIV+Q+PN+MDLVKCDGAALYY + WLLG+TP+E QIKDIAEWLLE+H
Sbjct: 419 LCDMLLRDAPIGIVSQSPNIMDLVKCDGAALYYGKRFWLLGITPSEAQIKDIAEWLLEHH 478
Query: 472 RGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDS 531
+ STGLSTDSL +AGYPGA +LGD VCG+AA KIT+KDFLFWFRSHTAKE+KWGGAKHD
Sbjct: 479 KDSTGLSTDSLADAGYPGAASLGDEVCGMAAAKITAKDFLFWFRSHTAKEVKWGGAKHDP 538
Query: 532 GGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIV 591
KD GRKMHPRSSFKAFLEVVK+RSLPWEDVEMDAIHSLQLILRGS QD D+K ++
Sbjct: 539 DDKDDGRKMHPRSSFKAFLEVVKRRSLPWEDVEMDAIHSLQLILRGSFQDIDDSDTKTMI 598
Query: 592 NVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
+ D +++ +DEL + NEMVRLIETA PILAVD+SG +NGWN+K A++TGL V +A
Sbjct: 599 HARLNDLKLQGMDELSTVANEMVRLIETATAPILAVDSSGFINGWNAKVADVTGLPVTEA 658
Query: 652 IGTALV-DLVAGDSVDVVKNMLSSAF 676
+G +L +LV +S D+V+ +L A
Sbjct: 659 MGRSLAKELVLHESADMVERLLYLAL 684
>gi|159147355|gb|ABW91071.1| phytochrome-4 [Ceratodon purpureus]
Length = 1125
Score = 923 bits (2385), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/681 (64%), Positives = 545/681 (80%), Gaps = 11/681 (1%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD-----FDYSTSVNISSS---T 56
++ K +YS +S +SK + RVA QT+ DAKL ++ES+ FDYS SV ++
Sbjct: 2 TSTKLSYSSGASVKSKHSVRVA-QTTADAKLFAVYEESNNSGDSFDYSKSVGQAAKPAVQ 60
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+ VP+ V+AYLQR+QRG L Q FGCMIAV+E F V+ YSENAPE+LDL P AVP++ Q
Sbjct: 61 AQVPAQAVTAYLQRMQRGGLTQTFGCMIAVEENTFRVIAYSENAPELLDLMPQAVPSVGQ 120
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G D R+LFT S AAL++AA+ ++ ++NPI +H ++SGKPFYAI+HRIDVG+V
Sbjct: 121 QEVLGIGTDARSLFTPSSVAALERAASTHDLTMVNPISVHTRSSGKPFYAIVHRIDVGVV 180
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
+D EPV P+DV ++ AG L S+KLAAKAI+RLQSLP G+I LLCD +V EV +LTGYDRV
Sbjct: 181 MDFEPVRPNDVVISTAGTLHSHKLAAKAIARLQSLPGGDIGLLCDTVVEEVRELTGYDRV 240
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
M YKFH+DEHGEV+AE RR DLE YLG HYP+TDIPQASRFL MKN+VRMI DC APP K
Sbjct: 241 MAYKFHDDEHGEVLAEIRRSDLESYLGLHYPSTDIPQASRFLFMKNRVRMIADCCAPPXK 300
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQDK L QP++L GSTLRAPHGCHA+YM NMGS+AS+ ++V +N+ ED+ Q++GR+
Sbjct: 301 VIQDKDLRQPVTLAGSTLRAPHGCHAQYMGNMGSVASITLAVIVNDQEDDF-GVQQKGRR 359
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R + +PLR ACEFL+QVFG+Q+N EVEL AQ+REKHILRTQT+LCDML
Sbjct: 360 LWGLVVCHHTSARTISYPLRCACEFLMQVFGLQLNMEVELQAQMREKHILRTQTLLCDML 419
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+P+GIV+Q+PN+MDLVKCDGAALYY + WLLG+TP+E+QIKD+AEWLLE H+ STG
Sbjct: 420 LRDAPIGIVSQSPNIMDLVKCDGAALYYNDRFWLLGITPSEQQIKDVAEWLLENHKDSTG 479
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYP A LGDAVCG+AA +I+ DFLFWFRSHTAKEIKWGGAK ++ KD
Sbjct: 480 LSTDSLADAGYPSANLLGDAVCGMAAARISPSDFLFWFRSHTAKEIKWGGAKQEADEKDD 539
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
GRKM PRSS AFLEVVK+RSLPWED+EMDAIHSLQLILRGS Q+ + SK +++
Sbjct: 540 GRKMTPRSSLNAFLEVVKRRSLPWEDIEMDAIHSLQLILRGSFQEIDGDSSKSMIHARLH 599
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D +++ +DEL + NEMVRLIETA PILAVD++G +NGWN+K AELTGL V A+G +L
Sbjct: 600 DMKLQGMDELSTVANEMVRLIETATAPILAVDSNGFINGWNAKVAELTGLPVGDAMGRSL 659
Query: 657 V-DLVAGDSVDVVKNMLSSAF 676
V DL+ +SV+VV+ +L A
Sbjct: 660 VNDLILDESVEVVERLLYLAL 680
>gi|3724346|dbj|BAA33775.1| phytochrome 2 [Adiantum capillus-veneris]
Length = 1140
Score = 922 bits (2383), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/675 (66%), Positives = 538/675 (79%), Gaps = 18/675 (2%)
Query: 20 KQNARVA-AQTSIDAKLAEDFDE---------SDFDYSTSVNISSST---SNVPSSTVSA 66
K N RV AQT+ DAKL F++ S FDY S+ + + VP+ V+A
Sbjct: 26 KHNRRVVVAQTTADAKLHAVFEQAQSEGDTGGSSFDYMRSIEDARGSVLSERVPAQAVTA 85
Query: 67 YLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD-ALTLGID 125
YLQR+QRG LIQPFGCM+A++E +F V+ YSENA EMLDL P +VP++ Q L +G D
Sbjct: 86 YLQRMQRGGLIQPFGCMLALEEGSFRVIAYSENAAEMLDLMPQSVPSVGVQVLVLGIGTD 145
Query: 126 VRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPD 185
RTLFT + AAAL+KA+ +V++LNPI +HC++S KPF AI+HRIDVGLVID EPV P
Sbjct: 146 ARTLFTYASAAALEKASGAVDVSMLNPITVHCRSSSKPFNAIVHRIDVGLVIDFEPVRPA 205
Query: 186 DVPV-TAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHED 244
DV V AAGAL+S+KLAAKAISRLQ+LP G+I LLCD +V EV +LTGYDRVM YKFHED
Sbjct: 206 DVAVWAAAGALQSHKLAAKAISRLQALPVGDIDLLCDSVVEEVRELTGYDRVMAYKFHED 265
Query: 245 EHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLD 304
EHGEV+AE RR DLEPYLG HYPATDIPQASRFL MKN+VRMICDC A PV+VIQDK+L
Sbjct: 266 EHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMKNRVRMICDCRALPVRVIQDKELR 325
Query: 305 QPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG--RKLWGLVV 362
QPLSL GSTLRAPHGCH++YM NMGSIASLVM+V +N+ ++++ N +Q R+LWGLVV
Sbjct: 326 QPLSLAGSTLRAPHGCHSQYMANMGSIASLVMAVVVNDNDEDVSNRSQQPKMRRLWGLVV 385
Query: 363 CHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPV 422
CHHT+PR VPF LR ACEFL+QVFG+Q+N E+EL+AQ+REKHILRTQT+LCDMLLRD+P+
Sbjct: 386 CHHTTPRAVPFALRSACEFLMQVFGLQLNMELELAAQMREKHILRTQTLLCDMLLRDAPI 445
Query: 423 GIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSL 482
GIV+++PN+MDLVKCDGAALYY WLLG TP E QIKD+AEWLL+ HR STGLSTDSL
Sbjct: 446 GIVSESPNIMDLVKCDGAALYYGKNFWLLGTTPIEAQIKDLAEWLLDVHRDSTGLSTDSL 505
Query: 483 VEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHP 542
+AGYPGA ALGDAVCG+AA KIT++DFLFWFRSHTAKEIKWGGAKHD +D GRKMHP
Sbjct: 506 ADAGYPGAAALGDAVCGMAAAKITTRDFLFWFRSHTAKEIKWGGAKHDPEDRDDGRKMHP 565
Query: 543 RSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEK 602
RSSFKAFLEVVK+RSLPWED+EMDAIHSLQLILRGS QD D+K +++ D ++
Sbjct: 566 RSSFKAFLEVVKRRSLPWEDMEMDAIHSLQLILRGSFQDIDDSDTKTMIHARLNDLKLHG 625
Query: 603 IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVA 661
+DEL + NEMVRLIETA PI AVDA G +NGWN+K AELTGLTV++A+ +LV D+V
Sbjct: 626 MDELSTVANEMVRLIETATAPIFAVDAGGFINGWNAKVAELTGLTVEEAMSRSLVRDVVV 685
Query: 662 GDSVDVVKNMLSSAF 676
S++ + +L A
Sbjct: 686 NASMETAERVLDLAL 700
>gi|25986851|gb|AAM94956.1| phytochrome [Ceratodon purpureus]
Length = 1126
Score = 922 bits (2382), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/681 (64%), Positives = 537/681 (78%), Gaps = 10/681 (1%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD-----FDYSTSVN---ISSST 56
++ K YS S +SK + RVA QT+ DAKL ++ES+ FDYS SV S+
Sbjct: 2 ASAKMAYSSGSGIKSKHSVRVA-QTTSDAKLQAVYEESNDSGDSFDYSKSVAQAAKSTGQ 60
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
VP+ V+AYLQR+QRG L Q FGCM+AV+E F V+ YSENAPE+LD+ P AVP++ Q
Sbjct: 61 QQVPAQAVTAYLQRMQRGGLTQTFGCMLAVEENTFRVIAYSENAPELLDVMPQAVPSLGQ 120
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
QD L +G D R+LFT S A AL++AA +++L+NPI +H + SGKPFYAI+HRIDVG+V
Sbjct: 121 QDVLGIGTDARSLFTPSSATALERAAGAADLSLVNPISVHSRASGKPFYAIIHRIDVGIV 180
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
+ EPV P+DV V+ AG L S+KLAAKAI+RLQ+L G+I LLCD +V EV +LTGYDRV
Sbjct: 181 MGFEPVRPNDVIVSTAGTLHSHKLAAKAIARLQALSGGDIGLLCDTVVEEVRELTGYDRV 240
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
M YKFHEDEHGEV+AE RR DLEPYLG HYP+TDIPQASRFL MKN+VRMI DC APPVK
Sbjct: 241 MAYKFHEDEHGEVLAEIRRSDLEPYLGLHYPSTDIPQASRFLFMKNRVRMIVDCWAPPVK 300
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQDK L QP+SL GSTLRAPHGCHA+YM NMGS+AS+ M+V N+ ED+ Q + R+
Sbjct: 301 VIQDKDLRQPISLAGSTLRAPHGCHAQYMGNMGSVASVTMAVIXNDQEDDFGGQQTRARR 360
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R + FPLR ACEFL+QVFG+Q+N EVEL Q REKHILRTQT+LCDML
Sbjct: 361 LWGLVVCHHTSARTISFPLRSACEFLMQVFGLQLNMEVELENQKREKHILRTQTMLCDML 420
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PVGIV+Q PN+MDLVKCDGAALYY + WLLG+TP+EEQI++IA WLLE+H+ STG
Sbjct: 421 LRDAPVGIVSQCPNIMDLVKCDGAALYYGKRFWLLGITPSEEQIEEIANWLLEHHQDSTG 480
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+AA +IT DFLFWFRSHTAKEIK GGAKH++ KD
Sbjct: 481 LSTDSLADAGYPGANLLGDAVCGMAAARITPTDFLFWFRSHTAKEIKRGGAKHEADDKDD 540
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
GRKM PRSSF AFLEV+K+RS+PWED+EMDAIHSLQLILRGS QD D+K +++
Sbjct: 541 GRKMTPRSSFNAFLEVMKRRSVPWEDIEMDAIHSLQLILRGSFQDIDDSDTKTMIHARLN 600
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D +++ +DEL + NEMVRLIETA PILAVD++G +NGWN+K AELTGL V A+G +L
Sbjct: 601 DLKLQGMDELSTVANEMVRLIETATAPILAVDSNGFINGWNAKVAELTGLPVGDAMGRSL 660
Query: 657 V-DLVAGDSVDVVKNMLSSAF 676
V DL+ +SV+VV+ +L A
Sbjct: 661 VQDLIVDESVEVVERLLYLAL 681
>gi|3724336|dbj|BAA33774.1| phytochrome 2 [Adiantum capillus-veneris]
Length = 973
Score = 921 bits (2381), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/675 (66%), Positives = 538/675 (79%), Gaps = 18/675 (2%)
Query: 20 KQNARVA-AQTSIDAKLAEDFDE---------SDFDYSTSVNISSST---SNVPSSTVSA 66
K N RV AQT+ DAKL F++ S FDY S+ + + VP+ V+A
Sbjct: 26 KHNRRVVVAQTTADAKLHAVFEQAQSEGDTGGSSFDYMRSIEDARGSVLSERVPAQAVTA 85
Query: 67 YLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD-ALTLGID 125
YLQR+QRG LIQPFGCM+A++E +F V+ YSENA EMLDL P +VP++ Q L +G D
Sbjct: 86 YLQRMQRGGLIQPFGCMLALEEGSFRVIAYSENAAEMLDLMPQSVPSVGVQVLVLGIGTD 145
Query: 126 VRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPD 185
RTLFT + AAAL+KA+ +V++LNPI +HC++S KPF AI+HRIDVGLVID EPV P
Sbjct: 146 ARTLFTYASAAALEKASGAVDVSMLNPITVHCRSSSKPFNAIVHRIDVGLVIDFEPVRPA 205
Query: 186 DVPV-TAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHED 244
DV V AAGAL+S+KLAAKAISRLQ+LP G+I LLCD +V EV +LTGYDRVM YKFHED
Sbjct: 206 DVAVWAAAGALQSHKLAAKAISRLQALPVGDIDLLCDSVVEEVRELTGYDRVMAYKFHED 265
Query: 245 EHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLD 304
EHGEV+AE RR DLEPYLG HYPATDIPQASRFL MKN+VRMICDC A PV+VIQDK+L
Sbjct: 266 EHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMKNRVRMICDCRALPVRVIQDKELR 325
Query: 305 QPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG--RKLWGLVV 362
QPLSL GSTLRAPHGCH++YM NMGSIASLVM+V +N+ ++++ N +Q R+LWGLVV
Sbjct: 326 QPLSLAGSTLRAPHGCHSQYMANMGSIASLVMAVVVNDNDEDVSNRSQQPKMRRLWGLVV 385
Query: 363 CHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPV 422
CHHT+PR VPF LR ACEFL+QVFG+Q+N E+EL+AQ+REKHILRTQT+LCDMLLRD+P+
Sbjct: 386 CHHTTPRAVPFALRSACEFLMQVFGLQLNMELELAAQMREKHILRTQTLLCDMLLRDAPI 445
Query: 423 GIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSL 482
GIV+++PN+MDLVKCDGAALYY WLLG TP E QIKD+AEWLL+ HR STGLSTDSL
Sbjct: 446 GIVSESPNIMDLVKCDGAALYYGKNFWLLGTTPIEAQIKDLAEWLLDVHRDSTGLSTDSL 505
Query: 483 VEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHP 542
+AGYPGA ALGDAVCG+AA KIT++DFLFWFRSHTAKEIKWGGAKHD +D GRKMHP
Sbjct: 506 ADAGYPGAAALGDAVCGMAAAKITTRDFLFWFRSHTAKEIKWGGAKHDPEDRDDGRKMHP 565
Query: 543 RSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEK 602
RSSFKAFLEVVK+RSLPWED+EMDAIHSLQLILRGS QD D+K +++ D ++
Sbjct: 566 RSSFKAFLEVVKRRSLPWEDMEMDAIHSLQLILRGSFQDIDDSDTKTMIHARLNDLKLHG 625
Query: 603 IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVA 661
+DEL + NEMVRLIETA PI AVDA G +NGWN+K AELTGLTV++A+ +LV D+V
Sbjct: 626 MDELSTVANEMVRLIETATAPIFAVDAGGFINGWNAKVAELTGLTVEEAMSRSLVRDVVV 685
Query: 662 GDSVDVVKNMLSSAF 676
S++ + +L A
Sbjct: 686 NASMETAERVLDLAL 700
>gi|38037242|gb|AAR08427.1| phytochrome A [Monotropastrum globosum]
Length = 1130
Score = 920 bits (2378), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/687 (64%), Positives = 534/687 (77%), Gaps = 15/687 (2%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSN--VP 60
S+++ S SS RSK +AR+ AQT++DAKL DF+ES FDYSTSV + + P
Sbjct: 2 SSSRPTQSSGSSGRSKHSARIIAQTTVDAKLHADFEESGGSFDYSTSVRFTGTVGGDIQP 61
Query: 61 SS--TVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
S +AYL ++QRG+LIQPFGC++AVDE+ F V+ YSENAPEML + HAVP++
Sbjct: 62 RSDKVTTAYLHQIQRGKLIQPFGCLLAVDEKTFKVIAYSENAPEMLTMVSHAVPSVGDHP 121
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
L +G DVRT+FT+ AAALQKA +GEV+LLNPIL+HCKTSGKPFYAI+HR+ L+ID
Sbjct: 122 LLGIGTDVRTIFTNPSAAALQKAMGYGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIID 181
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSGN+ +LCD +V EV +LTGYDRVMV
Sbjct: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGNMRILCDAMVQEVFELTGYDRVMV 241
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFH+D+HGEV +E +P LEPYLG HYPATDIPQA+RFL MKNK+RMICDC A VKVI
Sbjct: 242 YKFHDDDHGEVFSELTKPGLEPYLGLHYPATDIPQAARFLFMKNKIRMICDCHAKQVKVI 301
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTIN--------EAEDELDND 350
QD KL L+LCGSTLRAPH CH +YMENM SIASLVMSV +N N
Sbjct: 302 QDDKLPIDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVVVNEGDEEGDGGGSSVSSNQ 361
Query: 351 QEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQT 410
Q++ ++LWGL+VCH+T+PRFVPFPLRYACEFL QVF + VNKE+EL Q+ EK+ILRTQT
Sbjct: 362 QQKIKRLWGLLVCHNTTPRFVPFPLRYACEFLAQVFTIHVNKELELENQIHEKNILRTQT 421
Query: 411 VLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEY 470
+LCDML+RD+P+GIV+Q+PNVMDLVKCDGA L Y+ K + +G TPT+ Q++DI WL EY
Sbjct: 422 LLCDMLMRDAPLGIVSQSPNVMDLVKCDGAVLLYKDKTYRMGTTPTDFQLRDIVYWLSEY 481
Query: 471 HRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHD 530
H STGLSTDSL +AGYPGALA GD VCG+AAVKITS D LFWF++ TA EI+WGGAKH+
Sbjct: 482 HTDSTGLSTDSLYDAGYPGALAFGDGVCGMAAVKITSNDMLFWFKAQTAAEIQWGGAKHE 541
Query: 531 SGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKM- 589
SG +D GRKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D A D+
Sbjct: 542 SGERDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDTKAMDATTD 601
Query: 590 IVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVD 649
+++ D +IE ++EL +T+EMVRLIETA VPILAVD G VNGWN K AELTGL VD
Sbjct: 602 VIHTRLHDLKIEGMEELEAVTSEMVRLIETATVPILAVDVDGLVNGWNLKIAELTGLPVD 661
Query: 650 QAIGTALVDLVAGDSVDVVKNMLSSAF 676
+AIG L+ LV S +VK ML A
Sbjct: 662 KAIGRDLLSLVEDSSTGIVKKMLDLAL 688
>gi|168029421|ref|XP_001767224.1| phytochrome 5b3 [Physcomitrella patens subsp. patens]
gi|162681479|gb|EDQ67905.1| phytochrome 5b3 [Physcomitrella patens subsp. patens]
Length = 1131
Score = 920 bits (2377), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/680 (63%), Positives = 541/680 (79%), Gaps = 10/680 (1%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD-----FDYSTSVN--ISSSTS 57
S+ K +YS +S +SK + RV QT+ DAKL ++ES+ FDYS SV S+
Sbjct: 2 SSTKLSYSSGTSVKSKHSVRVQ-QTTADAKLQAVYEESNDSGDSFDYSKSVGQATKSTVQ 60
Query: 58 NVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQ 117
VP+ V+AYLQR+QRG L Q FGCM+AV+E F V+ YSENAPEMLDL P AVP++ +
Sbjct: 61 QVPAQAVTAYLQRMQRGGLTQNFGCMLAVEESTFRVIAYSENAPEMLDLMPQAVPSVGLK 120
Query: 118 DALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVI 177
+ L +G D R LFT S A+ L++AA ++ ++NPI +H + SGKPFYAI+HRIDVG+VI
Sbjct: 121 EVLGIGTDARLLFTPSSASTLERAAATSDLTMVNPISVHSRNSGKPFYAIVHRIDVGIVI 180
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV +DV ++ AGAL S+KLAAKA+SRLQSLP G+I LLCD +V EV +LTGYDRVM
Sbjct: 181 DFEPVRSNDVVISTAGALHSHKLAAKAVSRLQSLPGGDIGLLCDAVVEEVRELTGYDRVM 240
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+DEHGEV+AE RR DLE YLG HYP+TDIPQASRFL MKN+VRMI DC APPVKV
Sbjct: 241 AYKFHDDEHGEVLAEIRRSDLESYLGLHYPSTDIPQASRFLFMKNRVRMIADCCAPPVKV 300
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKL 357
IQDK L QP++L GSTLRAPHGCHA+YM NMGS+AS+ ++V +++ E++ Q++GR+L
Sbjct: 301 IQDKDLRQPITLAGSTLRAPHGCHAQYMGNMGSVASITLAVIVHDQEEDF-GVQQKGRRL 359
Query: 358 WGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLL 417
WGLVVCHHTSPR + FPLR ACEFL+QVFG+Q+N EVEL AQ++EKHILRTQT+LCDMLL
Sbjct: 360 WGLVVCHHTSPRTISFPLRSACEFLMQVFGLQLNMEVELQAQMKEKHILRTQTLLCDMLL 419
Query: 418 RDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGL 477
RD+PVGIV+Q+PN+MDLVKCDGAALYY + WLLG TP+EEQI++IA WLLE+H+ STGL
Sbjct: 420 RDAPVGIVSQSPNIMDLVKCDGAALYYENQFWLLGTTPSEEQIEEIAAWLLEHHKDSTGL 479
Query: 478 STDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGG 537
STDSL +AGYPGA LGDAVCG+AA +I+SKDFL WFRSH+AKEIKWGGAKHD+ +D
Sbjct: 480 STDSLADAGYPGANLLGDAVCGMAAARISSKDFLLWFRSHSAKEIKWGGAKHDAEDRDDS 539
Query: 538 RKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVD 597
RKM PRSSF AFLEVVK+RS+PWED+EMDAIHSLQLILRGS QD K +++ D
Sbjct: 540 RKMTPRSSFNAFLEVVKRRSVPWEDIEMDAIHSLQLILRGSFQDVDGSGGKTMIHSRLHD 599
Query: 598 DRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV 657
+++ +DEL + NEMVRLIETA PILAVD++G +NGWN+K AELTGL V +A+G +LV
Sbjct: 600 LKLQGMDELSTVANEMVRLIETATAPILAVDSNGFINGWNAKVAELTGLPVGEAMGRSLV 659
Query: 658 -DLVAGDSVDVVKNMLSSAF 676
DL+ + V+VV+ +L A
Sbjct: 660 KDLILEEYVEVVERLLYLAL 679
>gi|224285845|gb|ACN40636.1| unknown [Picea sitchensis]
Length = 1132
Score = 919 bits (2375), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/683 (65%), Positives = 542/683 (79%), Gaps = 11/683 (1%)
Query: 3 SKSTNKTNYSRS-SSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
S+ST N S ++ + A AQ + DA+L + F++S FDY+ S I S+T
Sbjct: 10 SQSTGSNNRRSSINTNTTTNKATAMAQYNADARLLQVFEQSGESGKSFDYTRS--IKSTT 67
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL R+QRG IQPFGC++AV+E F ++ YSENA EMLDLAP +VP++EQ
Sbjct: 68 ESVPEQQITAYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAVEMLDLAPQSVPSMEQ 127
Query: 117 Q--DALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
+ LT+G DVRTLFT++ A +L+KAA E++L+NPI +HCK S KPFYAI+HRIDVG
Sbjct: 128 PQLEVLTIGTDVRTLFTAASAHSLEKAAVAQEISLMNPIWVHCKNSRKPFYAIVHRIDVG 187
Query: 175 LVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYD 234
+VID EP+ D V+AAGA++S KLA +AISRLQSLP G+I LLCD +V V +LTGYD
Sbjct: 188 MVIDFEPLKTGDAFVSAAGAVQSQKLAVRAISRLQSLPCGDIELLCDSVVENVRELTGYD 247
Query: 235 RVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPP 294
RVMVYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC+A P
Sbjct: 248 RVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATP 307
Query: 295 VKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG 354
V+VIQ ++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN +DE
Sbjct: 308 VQVIQSEELMQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIINGNDDEGAGSGRNS 367
Query: 355 RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCD 414
KLWGLVVCHHTSPR VPFPLRYACEF++Q FG+Q+N E++L+AQL EKHILRTQT+LCD
Sbjct: 368 MKLWGLVVCHHTSPRAVPFPLRYACEFMMQAFGLQLNMELQLAAQLTEKHILRTQTLLCD 427
Query: 415 MLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGS 474
MLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W+LGVTPTE QIKDIA+WLLE+H S
Sbjct: 428 MLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLEHHGDS 487
Query: 475 TGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGK 534
TGLSTDSL +AGYPGA +LGDAVCG+A+ +ITSKDFLFWFRSHTAKE+KWGGAKH K
Sbjct: 488 TGLSTDSLADAGYPGAASLGDAVCGMASARITSKDFLFWFRSHTAKEMKWGGAKHHPDDK 547
Query: 535 DGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVP 594
D GR+MHPRSSFKAFLEVVK+RSLPW++VE+DAIHSLQLILRGS QD +K +V+
Sbjct: 548 DDGRRMHPRSSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDIDDSGTKTMVHSR 607
Query: 595 SVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGT 654
D R++ IDEL + +EMVRLIETA PILAVD +G VN WN+K AELTGL V +A+G
Sbjct: 608 LNDLRLQGIDELSSVASEMVRLIETATAPILAVDYNGLVNVWNAKVAELTGLPVGEAMGM 667
Query: 655 ALV-DLVAGDSVDVVKNMLSSAF 676
+LV DLV +SV+ VK ML +A
Sbjct: 668 SLVQDLVFEESVERVKKMLCNAI 690
>gi|422898333|dbj|BAM67032.1| phytochrome a [Chrysanthemum seticuspe f. boreale]
Length = 1121
Score = 918 bits (2372), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/680 (63%), Positives = 543/680 (79%), Gaps = 8/680 (1%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSST--SNVP 60
++++ S ++SARSK +AR+ QT++DAKL DF+ES FDYS+SV++S++ P
Sbjct: 2 ASSRPTESSTNSARSKHSARIIQQTTVDAKLDADFEESGDSFDYSSSVHVSTTVIDGQQP 61
Query: 61 SS--TVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
S +AYL +Q+G+LIQPFGC++A+DE+ F V+ +SENAPEML + H VP + +
Sbjct: 62 RSDKVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAFSENAPEMLTMVSHTVPTVGENP 121
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
L +G DVRT+F A AL KA FGEV+LLNPIL+HCKTSGKPFYAI+HR+ L+ID
Sbjct: 122 VLGIGTDVRTIFAGPSATALFKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIID 181
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
EPV P++VP+TAAGAL+SYK AAKAI+RLQSLPSG+I LCD +V EV +LTGYDRVM
Sbjct: 182 FEPVMPNEVPMTAAGALQSYKHAAKAIARLQSLPSGSIERLCDTMVQEVFELTGYDRVMA 241
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFH+D+HGEVVAE +P L+PYLG HYPATDIPQA+RFL MKNKVRMICDC A VKV+
Sbjct: 242 YKFHDDDHGEVVAEITKPGLDPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKNVKVV 301
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-KL 357
QDKKL L+LCGS LRAPH CH +YM+NM SIASLVM+V IN+ ++E + Q R KL
Sbjct: 302 QDKKLPFDLTLCGSNLRAPHSCHLQYMDNMTSIASLVMAVVINDMDEEGQTSEPQKRKKL 361
Query: 358 WGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLL 417
WGLVVCH+T+PRFVPFPLR+ACEFL QVF + +NKE+EL Q+ EK+ILRTQT+LCD+L+
Sbjct: 362 WGLVVCHNTTPRFVPFPLRFACEFLAQVFAIHINKELELENQILEKNILRTQTLLCDLLM 421
Query: 418 RDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGL 477
RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K++ +GV+PT+ QI DI WL EYH STGL
Sbjct: 422 RDAPLGIVSQSPNIMDLVKCDGAALLYKNKVYRMGVSPTDSQIHDIVSWLYEYHMDSTGL 481
Query: 478 STDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGG 537
STDSL +AGYPGALALGD VCG+A+V++T KD LFWFRS+TA EI+WGGAKH+ G KD G
Sbjct: 482 STDSLYDAGYPGALALGDVVCGMASVRLTEKDILFWFRSNTASEIRWGGAKHEKGEKDDG 541
Query: 538 RKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVNVPSV 596
++MHPRSSFKAFLEVV+ RS PW+D EMDAIHSLQLI+R +L+D EVAE ++
Sbjct: 542 KRMHPRSSFKAFLEVVRMRSFPWKDFEMDAIHSLQLIMRNALKDNEVAELKTDVIQAGFN 601
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
+ +++ + EL +T+EMVRLIETA+VPILAVDA G+VNGWN+K AELTGLTV++AIG+ L
Sbjct: 602 ELKLDGMQELEAVTSEMVRLIETASVPILAVDADGSVNGWNTKIAELTGLTVEEAIGSNL 661
Query: 657 VDLVAGDSVDVVKNMLSSAF 676
+ LV SV+ V+ ML+ A
Sbjct: 662 LTLVEDSSVETVQKMLNLAL 681
>gi|2499555|sp|P93673.1|PHYA_LATSA RecName: Full=Phytochrome type A
gi|1848273|gb|AAB47994.1| phytochrome type A [Lathyrus sativus]
Length = 1124
Score = 914 bits (2362), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/683 (63%), Positives = 540/683 (79%), Gaps = 11/683 (1%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTS--NVP 60
ST + + S ++S RS+ +AR+ AQT++DAKL F+ES FDYS+ V +S S P
Sbjct: 2 STTRPSQSSNNSGRSRNSARIIAQTTVDAKLHATFEESGSSFDYSSWVRVSGSVDGDQQP 61
Query: 61 SST--VSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
S +AYL +QRG+ IQPFGC++A+DE+ V+ YSENAPEML + HAVP++
Sbjct: 62 RSNKVTTAYLNHIQRGKQIQPFGCLLALDEKTCKVVAYSENAPEMLTMVSHAVPSVGDHP 121
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
AL +G D+RT+FT+ A+ALQKA F EV+LLNPIL+HCKTSGKPFYAI+HR+ L+ID
Sbjct: 122 ALGIGTDIRTVFTAPSASALQKALGFAEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIID 181
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
EPV P +VP+TAAGAL+SYKLAAKAI+RLQSL SG++ LCD +V EV +LTGYDRVM
Sbjct: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLASGSMERLCDTMVQEVFELTGYDRVMA 241
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFHED+HGEV+AE +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A VKV+
Sbjct: 242 YKFHEDDHGEVIAEIAKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVKVL 301
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ----EQG 354
QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +N+++++ D+ ++
Sbjct: 302 QDEKLPFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNDSDEDGDSADAVLPQKK 361
Query: 355 RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCD 414
++LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKE+EL Q+ EK+ILRTQT+LCD
Sbjct: 362 KRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEIELEYQILEKNILRTQTLLCD 421
Query: 415 MLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGS 474
ML+RD+P+GIV+Q+PN+MDLVKCDGAAL+YR KLWLLG TPTE QI++IA W+ EYH S
Sbjct: 422 MLMRDAPLGIVSQSPNIMDLVKCDGAALFYRNKLWLLGATPTEYQIREIALWMSEYHTDS 481
Query: 475 TGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGK 534
TGLSTDSL++AG+PGAL+L D VCG+AAV+ITSKD +FWFRSHTA EI+WGGAKH+ G +
Sbjct: 482 TGLSTDSLLDAGFPGALSLSDTVCGMAAVRITSKDIVFWFRSHTAAEIRWGGAKHEPGEQ 541
Query: 535 DGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVNV 593
D GRKMHPRSSFKAFLEVVK RS+PW+D EMDAIHSLQLILR + +D ++ + + +N
Sbjct: 542 DDGRKMHPRSSFKAFLEVVKARSVPWKDFEMDAIHSLQLILRNASKDTDIIDLNTKAINT 601
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +IE + EL +T+EMVRLIETA VPILAVD G VNGWN K AELTGL V +AIG
Sbjct: 602 RLNDLKIEGMQELEAVTSEMVRLIETATVPILAVDVDGTVNGWNIKIAELTGLPVGEAIG 661
Query: 654 TALVDLVAGDSVDVVKNMLSSAF 676
L+ LV S D+VK ML+ A
Sbjct: 662 KHLLTLVEDSSTDIVKKMLNLAL 684
>gi|2851597|sp|P25848.3|PHY1_CERPU RecName: Full=Light-sensor Protein kinase; Includes: RecName:
Full=Phytochrome; Includes: RecName: Full=Protein kinase
gi|1839248|gb|AAB47762.1| phytochrome [Ceratodon purpureus]
Length = 1307
Score = 913 bits (2359), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/679 (65%), Positives = 538/679 (79%), Gaps = 10/679 (1%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNV 59
S K YS ++SA+SK + RVA QT+ DA L ++ S FDYS SV S +V
Sbjct: 2 SATKKTYSSTTSAKSKHSVRVA-QTTADAALEAVYEMSGDSGDSFDYSKSVG--QSAESV 58
Query: 60 PSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDA 119
P+ V+AYLQR+QR LIQ FGCM+AV+E NF V+ YSENA E LDL P AVP++ + D
Sbjct: 59 PAGAVTAYLQRMQREGLIQNFGCMVAVEEPNFCVIAYSENASEFLDLIPQAVPSMGEMDV 118
Query: 120 LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDL 179
L +G D+RTLFT S +AAL+KAA +++LLNPI +HC+ SGKP YAI HRID+G+VID
Sbjct: 119 LGIGTDIRTLFTPSSSAALEKAAATQDISLLNPITVHCRRSGKPLYAIAHRIDIGIVIDF 178
Query: 180 EPVNPDDVPVTAA-GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
E V DVPV+AA GAL+S+KLAA+AI+RLQ+LP G+I LLCD +V EV +LTGYDRVM
Sbjct: 179 EAVKMIDVPVSAAAGALQSHKLAARAITRLQALPGGDIELLCDTIVEEVRELTGYDRVMA 238
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
+KFHEDEHGEVVAE RR DLEPY+G HYPATDIPQASRFL+MKN+VR+I DC A PVK+I
Sbjct: 239 FKFHEDEHGEVVAEIRRMDLEPYMGLHYPATDIPQASRFLLMKNRVRLIADCYASPVKLI 298
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLW 358
QD + QP+SL GSTLRAPHGCHA+YM NMGSIASLVM+V IN+ E+ ++GRKLW
Sbjct: 299 QDPDIRQPVSLAGSTLRAPHGCHAQYMGNMGSIASLVMAVIINDNEEYSRGAIQRGRKLW 358
Query: 359 GLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLR 418
GLVVC HTSPR VPFPLR CEFL+QVFG+Q+N VEL+AQLREKHILRTQT+LCDMLLR
Sbjct: 359 GLVVCQHTSPRTVPFPLRSVCEFLMQVFGMQLNLHVELAAQLREKHILRTQTLLCDMLLR 418
Query: 419 DSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLS 478
D+P+GIV+QTPN+MDLVKCDGAALYY ++WLLG TPTE QIK+IA+WLLE+H STGLS
Sbjct: 419 DAPIGIVSQTPNIMDLVKCDGAALYYGKRVWLLGTTPTENQIKEIADWLLEHHNDSTGLS 478
Query: 479 TDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGR 538
TDSL +A YPGA LGDAVCG+AA KIT+KDFLFWFRSHTA E+KWGGAKHD KD GR
Sbjct: 479 TDSLADANYPGAHLLGDAVCGMAAAKITAKDFLFWFRSHTATEVKWGGAKHDPDEKDDGR 538
Query: 539 KMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDD 598
KMHPRSSFKAFLEVV +RS PWEDVEMDAIHSLQLILRGS +D D+K +++ D
Sbjct: 539 KMHPRSSFKAFLEVVNKRSPPWEDVEMDAIHSLQLILRGSFRDIADSDTKTMIHARLNDL 598
Query: 599 RIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV- 657
+++ ++E + NEM R++ETAA PILAVD+ G +N WN+K A++TGL V++A+ +L
Sbjct: 599 KLQGVEERNALANEMSRVLETAAAPILAVDSRGMINAWNAKIAQVTGLPVEEAMHCSLTK 658
Query: 658 DLVAGDSVDVVKNMLSSAF 676
DLV +SV VV+ +LS A
Sbjct: 659 DLVLDESVVVVERLLSLAL 677
>gi|258677125|gb|ACV87353.1| phytochrome A [Aquilegia formosa]
Length = 1130
Score = 910 bits (2351), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/684 (63%), Positives = 538/684 (78%), Gaps = 10/684 (1%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDE--SDFDYSTSVNISSSTSNVPSS 62
S ++ N +SS+RSK +ARV AQT++DAKL +F+E S FDYS SV++++S++ S
Sbjct: 2 SNSRPNQVATSSSRSKHSARVIAQTTVDAKLHAEFEETGSSFDYSRSVSVTNSSNQQTRS 61
Query: 63 --TVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDAL 120
+AYL ++Q+G+ IQPFGC++A+DE+ V+ YSENAPEML + HAVP++ + L
Sbjct: 62 DKVTTAYLHQIQKGKQIQPFGCLLALDEKTCKVIAYSENAPEMLTMVSHAVPSVGEHPVL 121
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
+G D++T+ TS A+ALQKA F +V LLNPIL+HCK+SGKPFYAI+HR+ L+ID E
Sbjct: 122 GIGTDLKTILTSPSASALQKALAFSDVTLLNPILVHCKSSGKPFYAIVHRVTGSLIIDFE 181
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
PV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG+I LCD +V EV LTGYDRVMVYK
Sbjct: 182 PVKPYEVPMTAAGALQSYKLAAKAIARLQSLPSGSIDRLCDTVVEEVFQLTGYDRVMVYK 241
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FH+D+HGEVV+E + L PYLG HYPATDIPQA+RFL MKNK+RMICDC A V+V+QD
Sbjct: 242 FHDDDHGEVVSETTKEGLPPYLGLHYPATDIPQAARFLFMKNKIRMICDCRAKHVRVLQD 301
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN----DQEQGRK 356
+KL L+LCGSTLRAPH CH +YMENM SIASLVM+V IN+ ++E Q Q RK
Sbjct: 302 EKLPFELTLCGSTLRAPHSCHLQYMENMDSIASLVMAVVINDGDEEEGTVEGASQSQKRK 361
Query: 357 -LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDM 415
LWGLVVCH+T+PRFVPFPLRYACEFLIQVF + VNKE EL Q+ EK+ILRTQT+LCDM
Sbjct: 362 RLWGLVVCHNTTPRFVPFPLRYACEFLIQVFAIHVNKEFELENQILEKNILRTQTLLCDM 421
Query: 416 LLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGST 475
L+R++P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG++P+E I+DIA WL EYH ST
Sbjct: 422 LMRNAPIGIVSQSPNIMDLVKCDGAALLYQNKIWRLGLSPSESHIRDIASWLSEYHMDST 481
Query: 476 GLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKD 535
GLSTDSL +AG+PGAL++GD VCG+AAV+I SKD LFWFRSHTA EI+WGGAKH+ G KD
Sbjct: 482 GLSTDSLYDAGFPGALSIGDTVCGMAAVRINSKDMLFWFRSHTAGEIRWGGAKHEPGEKD 541
Query: 536 GGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVNVP 594
GRKMHPRSSFKAFLEVVK RS PW+D EMDAIHSLQLILR + +D E A+ + +++
Sbjct: 542 DGRKMHPRSSFKAFLEVVKTRSFPWKDFEMDAIHSLQLILRNTFKDIETADGNTNVIHSQ 601
Query: 595 SVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGT 654
+I+ ++EL +TNEMVRLIETA VPILAVD +G +NGWN+K AELTGL VDQ IG
Sbjct: 602 LDKLKIDGMEELEAVTNEMVRLIETATVPILAVDINGLINGWNTKIAELTGLPVDQVIGK 661
Query: 655 ALVDLVAGDSVDVVKNMLSSAFLA 678
+ LV S + VK ML A L
Sbjct: 662 HFLKLVEESSAETVKRMLHLALLG 685
>gi|1813953|emb|CAA71838.1| photoreceptor [Ceratodon purpureus]
Length = 1299
Score = 909 bits (2349), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/672 (65%), Positives = 535/672 (79%), Gaps = 10/672 (1%)
Query: 12 SRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSA 66
S ++SA+SK + RVA QT+ DA L ++ S FDYS SV S +VP+ V+A
Sbjct: 1 SSTTSAKSKHSVRVA-QTTADAALEAVYEMSGDSGDSFDYSKSVG--QSAESVPAGAVTA 57
Query: 67 YLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDV 126
YLQR+QRG LIQ FGCM+AV+E NF V+ YSENA E LDL P AVP++ + D L +G D+
Sbjct: 58 YLQRMQRGGLIQNFGCMVAVEEPNFCVIAYSENASEFLDLIPQAVPSMGEMDVLGIGTDI 117
Query: 127 RTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDD 186
RTLFT S +AAL+KAA +++LLNPI +HC+ SGKP YAI HRID+G+VID E V D
Sbjct: 118 RTLFTPSSSAALEKAAATQDISLLNPITVHCRRSGKPLYAIAHRIDIGIVIDFEAVKMID 177
Query: 187 VPVTAA-GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDE 245
VPV+AA GAL+S+KLAA+AI+RLQ+LP G+I LLCD +V EV +LTGYDRVM +KFHEDE
Sbjct: 178 VPVSAAAGALQSHKLAARAITRLQALPGGDIELLCDTIVEEVRELTGYDRVMAFKFHEDE 237
Query: 246 HGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQ 305
HGEVVAE RR DLEPY+G HYPATDIPQASRFL+MKN+VR+I DC A PVK+IQD + Q
Sbjct: 238 HGEVVAEIRRMDLEPYMGLHYPATDIPQASRFLLMKNRVRLIADCYASPVKLIQDLDIRQ 297
Query: 306 PLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHH 365
P+SL GSTLRAPHGCHA+YM NMGSIASLVM+V IN+ E+ ++GRKLWGLVVC H
Sbjct: 298 PVSLAGSTLRAPHGCHAQYMGNMGSIASLVMAVIINDNEEYSRGAIQRGRKLWGLVVCQH 357
Query: 366 TSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIV 425
TSPR VPFPLR CEFL+QVFG+Q+N VEL AQLREKHILRTQT+LCDMLLRD+P+GIV
Sbjct: 358 TSPRTVPFPLRSVCEFLMQVFGMQLNLHVELGAQLREKHILRTQTLLCDMLLRDAPIGIV 417
Query: 426 TQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEA 485
+QTPN+MDLVKCDGAALYY ++WLLG TPTE QIK+IA+WLLE+H STGLSTDSL +A
Sbjct: 418 SQTPNIMDLVKCDGAALYYGKRVWLLGTTPTENQIKEIADWLLEHHNDSTGLSTDSLADA 477
Query: 486 GYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSS 545
YPGA LGDAVCG+AA KIT+KDFLFWFRSHTA E+KWGGAKHD KD GRKMHPRSS
Sbjct: 478 NYPGAHLLGDAVCGMAAAKITAKDFLFWFRSHTATEVKWGGAKHDPDEKDDGRKMHPRSS 537
Query: 546 FKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDE 605
FKAFLEVV +RS PWEDVEMDAIHSLQLILRGS +D D+K +++ D +++ ++E
Sbjct: 538 FKAFLEVVNKRSPPWEDVEMDAIHSLQLILRGSFRDIADSDTKTMIHARLNDLKLQGVEE 597
Query: 606 LRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDS 664
+ NEM R++ETAA PILAVD+ G +N WN+K A++TGL V++A+ +L DLV +S
Sbjct: 598 RNALANEMSRVLETAAAPILAVDSRGMINAWNAKIAQVTGLPVEEAMHCSLTKDLVLDES 657
Query: 665 VDVVKNMLSSAF 676
V VV+ +LS A
Sbjct: 658 VVVVERLLSLAL 669
>gi|255543066|ref|XP_002512596.1| phytochrome A, putative [Ricinus communis]
gi|223548557|gb|EEF50048.1| phytochrome A, putative [Ricinus communis]
Length = 1124
Score = 908 bits (2347), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/666 (65%), Positives = 534/666 (80%), Gaps = 13/666 (1%)
Query: 23 ARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTS--NVPSS--TVSAYLQRVQRGRL 76
AR+ +QT++DAKL DF+ES FDYS SV+++SST + P S +AYL +Q+G+L
Sbjct: 20 ARIISQTAVDAKLHADFEESGSSFDYSNSVHVTSSTGLDHAPRSDKVTTAYLHHIQKGKL 79
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGC++A+DE+ + V+ YSENAPEML + HAVP++ L +G D+RT+FT+ A+
Sbjct: 80 IQPFGCLLALDEKTYKVIAYSENAPEMLTMVSHAVPSVGDHPVLGIGTDIRTIFTAPSAS 139
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
ALQKA FG+V+LLNPIL+HCKTSGKPFYAI+HR+ +ID EPV P +VP+TAAGAL+
Sbjct: 140 ALQKALGFGDVSLLNPILVHCKTSGKPFYAIVHRVTGSFIIDFEPVKPYEVPMTAAGALQ 199
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
SYKLAAKAISRLQSLPSG++ LCD +V EV +LTGYDRVM YKFH+D+HGEV++E +P
Sbjct: 200 SYKLAAKAISRLQSLPSGSMERLCDTMVQEVFELTGYDRVMTYKFHDDDHGEVISEVTKP 259
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A VKV+QD+KL L+LCGSTLRA
Sbjct: 260 GLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRAKHVKVLQDEKLPLELTLCGSTLRA 319
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDND---QEQGRK-LWGLVVCHHTSPRFVP 372
PH CH +YMENM S+ASLVM+V +NE +++ D+ Q Q RK LWGLVVCH+T+PRFVP
Sbjct: 320 PHSCHLQYMENMDSVASLVMAVVVNEGDEDDDSPTSVQPQKRKRLWGLVVCHNTTPRFVP 379
Query: 373 FPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVM 432
FPLRYACEFL QVF + VNKE+EL Q+ EK+ILRTQT+LCDMLLRD+P+GI+TQ+PN+
Sbjct: 380 FPLRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLCDMLLRDAPLGILTQSPNIT 439
Query: 433 DLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALA 492
DLVKCDGAAL Y+ K+W LGVTP++ QI+DIA WL EYH STGLSTDSL +AGY AL+
Sbjct: 440 DLVKCDGAALLYKNKIWRLGVTPSDLQIRDIAVWLSEYHMDSTGLSTDSLYDAGYSAALS 499
Query: 493 LGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEV 552
L D VCG+AAV+ITSKD LFWFR+ TA EI+WGGAKH+ G KD GRKMHPRSSFKAFLEV
Sbjct: 500 LEDVVCGMAAVRITSKDMLFWFRAPTAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLEV 559
Query: 553 VKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVNVPSVDDRIEKIDELRIIT 610
VK RSLPW+D EMDAIHSLQLILR + +D + D+K I + S D +IE + EL +T
Sbjct: 560 VKTRSLPWKDYEMDAIHSLQLILRNAFKDAETMDADAKAIHSRLS-DLKIEGMQELEAVT 618
Query: 611 NEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKN 670
+EMVRLIETA VPILAVD G VNGWN+K AELTGL VD+AIG L+ LV S+D+VKN
Sbjct: 619 SEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLPVDKAIGKHLLTLVEDGSIDLVKN 678
Query: 671 MLSSAF 676
ML SA
Sbjct: 679 MLFSAL 684
>gi|464380|sp|P33530.1|PHYA1_TOBAC RecName: Full=Phytochrome A1
gi|297478|emb|CAA47284.1| type-A phytochrome [Nicotiana tabacum]
Length = 1124
Score = 908 bits (2346), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/671 (64%), Positives = 535/671 (79%), Gaps = 11/671 (1%)
Query: 17 ARSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSN--VPSS--TVSAYLQR 70
ARSK +AR+ AQT+IDAKL DF+ES FDYS+SV ++S + P S +AYL +
Sbjct: 14 ARSKHSARIIAQTTIDAKLHADFEESGDSFDYSSSVRVTSVAGDERKPKSDRVTTAYLNQ 73
Query: 71 VQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLF 130
+Q+G+ IQPFGC++A+DE+ F V+ +SENAPEML + HAVP++ + AL +G D+RT+F
Sbjct: 74 IQKGKFIQPFGCLLALDEKTFKVIAFSENAPEMLTMVSHAVPSVGELPALGIGTDIRTIF 133
Query: 131 TSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVT 190
T AAALQKA FGEV+LLNP+L+HCKTSGKP+YAI+HR+ L+ID EPV P +VP+T
Sbjct: 134 TGPSAAALQKALGFGEVSLLNPVLVHCKTSGKPYYAIVHRVTGSLIIDFEPVKPYEVPMT 193
Query: 191 AAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVV 250
AAGAL+SYKLAAKAI+RLQ+LPSG++ LCD +V EV +LTGYDRVM YKFH+D+HGEVV
Sbjct: 194 AAGALQSYKLAAKAITRLQALPSGSMERLCDTMVQEVFELTGYDRVMTYKFHDDDHGEVV 253
Query: 251 AECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLC 310
AE +P L+PYLG HYPATDIPQA+RFL MKNKVRMICDC A VKV+QD+KL L+LC
Sbjct: 254 AEITKPGLDPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVVQDEKLPFDLTLC 313
Query: 311 GSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDE---LDNDQEQGRK-LWGLVVCHHT 366
GSTLRAPH CH +YMENM SIASLVM+V +N+ ++E D+ Q Q RK LWGLVVCH+T
Sbjct: 314 GSTLRAPHYCHLQYMENMSSIASLVMAVVVNDGDEEGESSDSTQSQKRKRLWGLVVCHNT 373
Query: 367 SPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVT 426
+PRFVPFPLRYACEFL QVF + VNKE+EL +Q+ EK+ILRTQT+LCDML+R +P+GIV+
Sbjct: 374 TPRFVPFPLRYACEFLAQVFAIHVNKELELESQILEKNILRTQTLLCDMLMRVAPLGIVS 433
Query: 427 QTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAG 486
Q+PN+MDLVKCDGAAL Y+ K+ LG+TP++ Q+ DI WL EYH STGLSTDSL +AG
Sbjct: 434 QSPNIMDLVKCDGAALLYKNKIHRLGMTPSDFQLHDIVSWLSEYHTDSTGLSTDSLYDAG 493
Query: 487 YPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSF 546
+PGALALGD VCG+AAV+I+ K +LFW+RSHTA E++WGGAKH+ G KD GRKMHPRSSF
Sbjct: 494 FPGALALGDVVCGMAAVRISDKGWLFWYRSHTAAEVRWGGAKHEPGEKDDGRKMHPRSSF 553
Query: 547 KAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKM-IVNVPSVDDRIEKIDE 605
KAFLEVVK RS+PW+D EMDAIHSLQLILR + +D A DS I++ D +I+ + E
Sbjct: 554 KAFLEVVKTRSVPWKDYEMDAIHSLQLILRNASKDADAMDSNTNIIHTKLNDLKIDGLQE 613
Query: 606 LRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSV 665
L +T EMVRLIETA+VPI AVD G +NGWN+K AELTGL VD+AIG L+ LV SV
Sbjct: 614 LEAVTAEMVRLIETASVPIFAVDVDGQLNGWNTKIAELTGLPVDEAIGNHLLTLVEDSSV 673
Query: 666 DVVKNMLSSAF 676
D V ML A
Sbjct: 674 DTVSKMLELAL 684
>gi|225450405|ref|XP_002278610.1| PREDICTED: phytochrome A1 [Vitis vinifera]
gi|147838424|emb|CAN76586.1| hypothetical protein VITISV_020287 [Vitis vinifera]
gi|183239014|gb|ACC60965.1| phytochrome A [Vitis vinifera]
gi|296089871|emb|CBI39690.3| unnamed protein product [Vitis vinifera]
Length = 1124
Score = 907 bits (2343), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/674 (64%), Positives = 531/674 (78%), Gaps = 18/674 (2%)
Query: 17 ARSKQNARVAAQTSIDAKLAEDFDESDFDYSTSVNISSSTS---NVPSS--TVSAYLQRV 71
RSK +AR+ AQT++DAKL DF+ES + S ++ + + P S +AYL +
Sbjct: 14 GRSKHSARIIAQTTVDAKLHADFEESGSSFDYSSSVRFTPAGGDQQPRSDKVTTAYLHHI 73
Query: 72 QRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFT 131
Q+G+LIQPFG ++A+DE+ F V+ YSENAPEML + HAVP++ + L +G DVRT+F+
Sbjct: 74 QKGKLIQPFGSLLALDEKTFKVIAYSENAPEMLTMVSHAVPSVGEHPVLGIGTDVRTIFS 133
Query: 132 SSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTA 191
A+AL KA FGEV+LLNPIL+HCKTSGKPFYAI+HR+ L+ID EPV P +VP+TA
Sbjct: 134 GPSASALHKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIIDFEPVKPYEVPMTA 193
Query: 192 AGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVA 251
AGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM YKFH+D+HGEVV+
Sbjct: 194 AGALQSYKLAAKAITRLQSLPSGSLERLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVVS 253
Query: 252 ECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCG 311
E +P LEPYLG HYPATDIPQA+RFL MKNKVRMICDC A ++V+QD+KL L+LCG
Sbjct: 254 EITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHIQVLQDEKLPFDLTLCG 313
Query: 312 STLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDND---QEQGRK-LWGLVVCHHTS 367
STLRAPH CH +YMENM SIASLVM+V +N+ ++E ++ Q Q RK LWGLVVCHHT+
Sbjct: 314 STLRAPHSCHVQYMENMNSIASLVMAVVVNDGDEEGESSNSGQPQKRKRLWGLVVCHHTT 373
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PRFVPFPLRYACEFL QVF + VNKE+EL +Q+ EK+ILRTQT+LCDML+RD+P+GIV+Q
Sbjct: 374 PRFVPFPLRYACEFLAQVFAIHVNKELELESQILEKNILRTQTLLCDMLMRDAPLGIVSQ 433
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+PNVMDLVKCDGAAL Y+ K+W LG+TP++ Q+ DI WL EYH STGLSTDSL +AGY
Sbjct: 434 SPNVMDLVKCDGAALLYKNKVWRLGITPSDFQLHDICSWLSEYHMDSTGLSTDSLYDAGY 493
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGALALGDAVCG+AAVKITSKD LFWFRSHTA E++WGGAKH+ G KD GRKMHPRSSFK
Sbjct: 494 PGALALGDAVCGMAAVKITSKDTLFWFRSHTAAEVRWGGAKHEPGEKDDGRKMHPRSSFK 553
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV-----DDRIEK 602
AFLEVVK RSLPW+D EMDAIHSLQLILR + +D A D VN ++ D +IE
Sbjct: 554 AFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSEAMD----VNTNAIHTKLNDLKIEG 609
Query: 603 IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAG 662
+ EL +T+EMVRLIETA+VPILAVD G VNGWN+K +ELT L VD+AIG L+ LV
Sbjct: 610 MQELEAVTSEMVRLIETASVPILAVDVDGLVNGWNTKISELTSLPVDKAIGMHLLTLVED 669
Query: 663 DSVDVVKNMLSSAF 676
S D VK ML A
Sbjct: 670 SSADTVKKMLHLAL 683
>gi|158322024|gb|ABW33491.1| phytochrome P [Pinus sylvestris]
Length = 864
Score = 906 bits (2341), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/636 (68%), Positives = 519/636 (81%), Gaps = 5/636 (0%)
Query: 44 FDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEM 103
FDY+ S I S+T +VP ++AYL R+QRG IQPFGC++AV+E F ++ YSENA EM
Sbjct: 7 FDYTRS--IKSTTESVPEQQITAYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAVEM 64
Query: 104 LDLAPHAVPNIE--QQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSG 161
LDLAP +VP++E QQD LT+G DVRTLFT++ A +L+KAA E++L+NPI +HCK S
Sbjct: 65 LDLAPQSVPSMEKPQQDVLTIGTDVRTLFTAASAHSLEKAAVAQEISLMNPIWVHCKNSR 124
Query: 162 KPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCD 221
KPFYAI+HRIDVG+VIDLEP+ D ++AAGA++S KLA +AISRLQSLP G++ LLCD
Sbjct: 125 KPFYAIVHRIDVGMVIDLEPLRTGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDVGLLCD 184
Query: 222 VLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMK 281
+V V +LTGYDRVMVYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+
Sbjct: 185 TVVENVRELTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQ 244
Query: 282 NKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTIN 341
N+VRMICDC+A PVKVIQ ++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN
Sbjct: 245 NRVRMICDCMATPVKVIQSEELMQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIIN 304
Query: 342 EAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLR 401
+DE KLWGLVVCHHTSPR VPFPLRYACEFL+Q G+Q+N E++L+AQL
Sbjct: 305 GNDDEGGGSGRNSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQALGLQLNMELQLAAQLT 364
Query: 402 EKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIK 461
EKHILRTQT+LCDMLLRD+P+GIVTQ+P++ DLVKCDGAALYY G WLLGVTPTE QIK
Sbjct: 365 EKHILRTQTLLCDMLLRDAPMGIVTQSPSIKDLVKCDGAALYYGGMCWLLGVTPTEAQIK 424
Query: 462 DIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKE 521
DIA+WLLE+H STGLSTDSL +AGYPGA +LGDAVCG+A+ +ITSKDFLFWFRSHTAKE
Sbjct: 425 DIADWLLEHHGDSTGLSTDSLADAGYPGAASLGDAVCGMASARITSKDFLFWFRSHTAKE 484
Query: 522 IKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD 581
+KWGGAKH KD R+MHPRSSFKAFLEVVK+RSLPW++VE+DAIHSLQLILRGS +D
Sbjct: 485 MKWGGAKHHPDDKDDARRMHPRSSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFRD 544
Query: 582 EVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAA 641
+K +V+ D R++ IDEL + +EMVRLIETA PILAVD +G VNGWN+K A
Sbjct: 545 IDDSGTKTMVHSRLNDLRLQGIDELSSVASEMVRLIETATAPILAVDYNGLVNGWNAKVA 604
Query: 642 ELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
ELTGL V +A+G +LV DLV SV+ V+ ML +A
Sbjct: 605 ELTGLPVGEAMGMSLVQDLVFEQSVERVEKMLHNAL 640
>gi|158322018|gb|ABW33488.1| phytochrome P [Pinus sylvestris]
Length = 864
Score = 905 bits (2340), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/636 (68%), Positives = 519/636 (81%), Gaps = 5/636 (0%)
Query: 44 FDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEM 103
FDY+ S I S+T +VP ++AYL R+QRG IQPFGC++AV+E F ++ YSENA EM
Sbjct: 7 FDYTRS--IKSTTESVPEQQITAYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAVEM 64
Query: 104 LDLAPHAVPNIE--QQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSG 161
LDLAP +VP++E QQD LT+G DVRTLFT++ A +L+KAA E++L+NPI +HCK S
Sbjct: 65 LDLAPQSVPSMEKPQQDVLTIGTDVRTLFTAASAHSLEKAAVAQEISLMNPIWVHCKNSR 124
Query: 162 KPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCD 221
KPFYAI+HRIDVG+VIDLEP+ D ++AAGA++S KLA +AISRLQSLP G++ LLCD
Sbjct: 125 KPFYAIVHRIDVGMVIDLEPLRTGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDVGLLCD 184
Query: 222 VLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMK 281
+V V +LTGYDRVMVYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+
Sbjct: 185 TVVENVRELTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQ 244
Query: 282 NKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTIN 341
N+VRMICDC+A PVKVIQ ++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN
Sbjct: 245 NRVRMICDCMATPVKVIQSEELMQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIIN 304
Query: 342 EAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLR 401
+DE KLWGLVVCHHTSPR VPFPLRYACEFL+Q G+Q+N E++L+AQL
Sbjct: 305 GNDDEGGGSGRNSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQALGLQLNMELQLAAQLT 364
Query: 402 EKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIK 461
EKHILRTQT+LCDMLLRD+P+GIVTQ+P++ DLVKCDGAALYY G W+LGVTPTE QIK
Sbjct: 365 EKHILRTQTLLCDMLLRDAPMGIVTQSPSIKDLVKCDGAALYYGGMCWMLGVTPTEAQIK 424
Query: 462 DIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKE 521
DIA+WLLE+H STGLSTDSL +AGYPGA +LGDAVCG+A+ +ITSKDFLFWFRSHTAKE
Sbjct: 425 DIADWLLEHHGDSTGLSTDSLADAGYPGAASLGDAVCGMASARITSKDFLFWFRSHTAKE 484
Query: 522 IKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD 581
+KWGGAKH KD R+MHPRSSFKAFLEVVK+RSLPW++VE+DAIHSLQLILRGS +D
Sbjct: 485 MKWGGAKHHPDDKDDARRMHPRSSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFRD 544
Query: 582 EVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAA 641
+K +V+ D R++ IDEL + +EMVRLIETA PILAVD +G VNGWN+K A
Sbjct: 545 IDDSGTKTMVHSRLNDLRLQGIDELSSVASEMVRLIETATAPILAVDYNGLVNGWNAKVA 604
Query: 642 ELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
ELTGL V +A+G +LV DLV SV+ V+ ML +A
Sbjct: 605 ELTGLPVGEAMGMSLVQDLVFEQSVERVEKMLHNAL 640
>gi|158321996|gb|ABW33477.1| phytochrome P [Pinus sylvestris]
gi|158321998|gb|ABW33478.1| phytochrome P [Pinus sylvestris]
gi|158322000|gb|ABW33479.1| phytochrome P [Pinus sylvestris]
gi|158322002|gb|ABW33480.1| phytochrome P [Pinus sylvestris]
gi|158322004|gb|ABW33481.1| phytochrome P [Pinus sylvestris]
gi|158322006|gb|ABW33482.1| phytochrome P [Pinus sylvestris]
gi|158322008|gb|ABW33483.1| phytochrome P [Pinus sylvestris]
gi|158322010|gb|ABW33484.1| phytochrome P [Pinus sylvestris]
gi|158322012|gb|ABW33485.1| phytochrome P [Pinus sylvestris]
gi|158322014|gb|ABW33486.1| phytochrome P [Pinus sylvestris]
gi|158322016|gb|ABW33487.1| phytochrome P [Pinus sylvestris]
gi|158322020|gb|ABW33489.1| phytochrome P [Pinus sylvestris]
gi|158322022|gb|ABW33490.1| phytochrome P [Pinus sylvestris]
Length = 864
Score = 905 bits (2340), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/636 (68%), Positives = 519/636 (81%), Gaps = 5/636 (0%)
Query: 44 FDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEM 103
FDY+ S I S+T +VP ++AYL R+QRG IQPFGC++AV+E F ++ YSENA EM
Sbjct: 7 FDYTRS--IKSTTESVPEQQITAYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAVEM 64
Query: 104 LDLAPHAVPNIE--QQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSG 161
LDLAP +VP++E QQD LT+G DVRTLFT++ A +L+KAA E++L+NPI +HCK S
Sbjct: 65 LDLAPQSVPSMEKPQQDVLTIGTDVRTLFTAASAHSLEKAAVAQEISLMNPIWVHCKNSR 124
Query: 162 KPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCD 221
KPFYAI+HRIDVG+VIDLEP+ D ++AAGA++S KLA +AISRLQSLP G++ LLCD
Sbjct: 125 KPFYAIVHRIDVGMVIDLEPLRTGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDVGLLCD 184
Query: 222 VLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMK 281
+V V +LTGYDRVMVYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+
Sbjct: 185 TVVENVRELTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQ 244
Query: 282 NKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTIN 341
N+VRMICDC+A PVKVIQ ++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN
Sbjct: 245 NRVRMICDCMATPVKVIQSEELMQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIIN 304
Query: 342 EAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLR 401
+DE KLWGLVVCHHTSPR VPFPLRYACEFL+Q G+Q+N E++L+AQL
Sbjct: 305 GNDDEGGGSGRNSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQALGLQLNMELQLAAQLT 364
Query: 402 EKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIK 461
EKHILRTQT+LCDMLLRD+P+GIVTQ+P++ DLVKCDGAALYY G W+LGVTPTE QIK
Sbjct: 365 EKHILRTQTLLCDMLLRDAPMGIVTQSPSIKDLVKCDGAALYYGGMCWMLGVTPTEAQIK 424
Query: 462 DIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKE 521
DIA+WLLE+H STGLSTDSL +AGYPGA +LGDAVCG+A+ +ITSKDFLFWFRSHTAKE
Sbjct: 425 DIADWLLEHHGDSTGLSTDSLADAGYPGAASLGDAVCGMASARITSKDFLFWFRSHTAKE 484
Query: 522 IKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD 581
+KWGGAKH KD R+MHPRSSFKAFLEVVK+RSLPW++VE+DAIHSLQLILRGS +D
Sbjct: 485 MKWGGAKHHPDDKDDARRMHPRSSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFRD 544
Query: 582 EVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAA 641
+K +V+ D R++ IDEL + +EMVRLIETA PILAVD +G VNGWN+K A
Sbjct: 545 IDDSGTKTMVHSRLNDLRLQGIDELSSVASEMVRLIETATAPILAVDYNGLVNGWNAKVA 604
Query: 642 ELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
ELTGL V +A+G +LV DLV SV+ V+ ML +A
Sbjct: 605 ELTGLPVGEAMGMSLVQDLVFEQSVERVEKMLHNAL 640
>gi|350536201|ref|NP_001234490.1| alternative transcript type 3 [Solanum lycopersicum]
gi|3492795|emb|CAA05086.1| phyA [Solanum lycopersicum]
gi|3492797|emb|CAA05087.1| phyA [Solanum lycopersicum]
gi|3492799|emb|CAA05088.1| phyA [Solanum lycopersicum]
gi|3492801|emb|CAA05089.1| phyA [Solanum lycopersicum]
Length = 1123
Score = 905 bits (2339), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/668 (64%), Positives = 527/668 (78%), Gaps = 11/668 (1%)
Query: 20 KQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSN--VPSS--TVSAYLQRVQR 73
K +AR+ AQTSIDAKL DF+ES FDYS+SV ++S + P S +AYL ++Q+
Sbjct: 17 KHSARIVAQTSIDAKLHADFEESGDSFDYSSSVRVTSVAGDEEKPKSDKVTTAYLHQIQK 76
Query: 74 GRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSS 133
G+ IQPFGC++A+DE+ V+ +SENAPEML + HAVP++ + L +G D+RT+FT
Sbjct: 77 GKFIQPFGCLLALDEKTLKVIAFSENAPEMLTMVSHAVPSVGEHPVLGIGTDIRTIFTGP 136
Query: 134 GAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAG 193
AALQKA FGEV+LLNP+L+HCK SGKPFYAI+HR+ L++D EPV P +VP+TAAG
Sbjct: 137 SGAALQKALGFGEVSLLNPVLVHCKNSGKPFYAIVHRVTGSLILDFEPVKPYEVPMTAAG 196
Query: 194 ALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAEC 253
AL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM YKFHED+HGEVV+E
Sbjct: 197 ALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMGYKFHEDDHGEVVSEI 256
Query: 254 RRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGST 313
+P LEPYLG HYPATDIPQA+RFL MKNKVRMICDC A VKV+QD+KL L+LCGST
Sbjct: 257 TKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVVQDEKLPFDLTLCGST 316
Query: 314 LRAPHGCHARYMENMGSIASLVMSVTINEAEDE---LDNDQEQGRK-LWGLVVCHHTSPR 369
LRAPH CH +YMENM SIASLVM+V +N+ ++E D+ Q Q RK LWGLVVCH+T+PR
Sbjct: 317 LRAPHYCHLQYMENMNSIASLVMAVVVNDGDEEGESSDSSQSQKRKRLWGLVVCHNTTPR 376
Query: 370 FVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTP 429
FVPFPLRYACEFL QVF + VNKE+EL Q EK+ILRTQT+LCDML+RD+P+GIV+Q+P
Sbjct: 377 FVPFPLRYACEFLAQVFAIHVNKELELENQFLEKNILRTQTLLCDMLMRDAPLGIVSQSP 436
Query: 430 NVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPG 489
N+MDLVKCDGAAL Y+ K+ LG+ P++ Q++DI WL EYH STGLSTDSL +AG+PG
Sbjct: 437 NIMDLVKCDGAALLYKNKIHRLGMNPSDFQLQDIVSWLCEYHTDSTGLSTDSLYDAGFPG 496
Query: 490 ALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAF 549
ALALGDAVCG+AAV+I+ KD+LFWFRSHTA E++WGGAKH+ G KD GRKMHPRSSFKAF
Sbjct: 497 ALALGDAVCGMAAVRISDKDWLFWFRSHTAAEVRWGGAKHEPGEKDDGRKMHPRSSFKAF 556
Query: 550 LEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVNVPSVDDRIEKIDELRI 608
LEVVK RS+PW+D EMDAIHSLQLILR + +D EV + + D +I+ + EL
Sbjct: 557 LEVVKTRSIPWKDYEMDAIHSLQLILRNAFKDAEVVNSNTNSIYKKLNDLKIDGMQELES 616
Query: 609 ITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVV 668
+T EMVRLIETA VPILAVD G VNGWN+K AELTGL VD+AIG L+ LV SVD V
Sbjct: 617 VTAEMVRLIETALVPILAVDVDGQVNGWNTKIAELTGLPVDEAIGKHLLTLVEDSSVDTV 676
Query: 669 KNMLSSAF 676
ML A
Sbjct: 677 NKMLELAL 684
>gi|183239022|gb|ACC60969.1| phytochrome A [Vitis riparia]
Length = 1124
Score = 904 bits (2337), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/674 (64%), Positives = 531/674 (78%), Gaps = 18/674 (2%)
Query: 17 ARSKQNARVAAQTSIDAKLAEDFDESDFDYSTSVNISSSTS---NVPSS--TVSAYLQRV 71
RSK +AR+ AQT++DAKL DF+ES + S ++ + + P S +AYL +
Sbjct: 14 GRSKHSARIIAQTTVDAKLHADFEESGSSFDYSSSVRFTPAGGDQQPRSDKVTTAYLHHI 73
Query: 72 QRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFT 131
Q+G+LIQPFG ++A+D++ F V+ YSENAPEML + HAVP++ + L +G DVRT+F+
Sbjct: 74 QKGKLIQPFGSLLALDDKTFKVIAYSENAPEMLTMVSHAVPSVGEHPVLGIGTDVRTIFS 133
Query: 132 SSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTA 191
A+AL KA FGEV+LLNPIL+HCKTSGKPFYAI+HR+ L+ID EPV P +VP+TA
Sbjct: 134 GPSASALHKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIIDFEPVKPYEVPMTA 193
Query: 192 AGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVA 251
AGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM YKFH+D+HGEVV+
Sbjct: 194 AGALQSYKLAAKAITRLQSLPSGSLERLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVVS 253
Query: 252 ECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCG 311
E +P LEPYLG HYPATDIPQA+RFL MKNKVRMICDC A ++V+QD+KL L+LCG
Sbjct: 254 EITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHIQVLQDEKLPFDLTLCG 313
Query: 312 STLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDND---QEQGRK-LWGLVVCHHTS 367
STLRAPH CH +YMENM SIASLVM+V +N+ ++E ++ Q Q RK LWGLVVCHHT+
Sbjct: 314 STLRAPHSCHVQYMENMNSIASLVMAVVVNDGDEEGESSNSGQPQKRKRLWGLVVCHHTT 373
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PRFVPFPLRYACEFL QVF + VNKE+EL +Q+ EK+ILRTQT+LCDML+RD+P+GIV+Q
Sbjct: 374 PRFVPFPLRYACEFLAQVFAIHVNKELELESQILEKNILRTQTLLCDMLMRDAPLGIVSQ 433
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+PNVMDLVKCDGAAL Y+ K+W LG+TP++ Q+ DI WL EYH STGLSTDSL +AGY
Sbjct: 434 SPNVMDLVKCDGAALLYKNKVWRLGITPSDFQLHDICSWLSEYHMDSTGLSTDSLYDAGY 493
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGALALGDAVCG+AAVKITSKD LFWFRSHTA E++WGGAKH+ G KD GRKMHPRSSFK
Sbjct: 494 PGALALGDAVCGMAAVKITSKDTLFWFRSHTAAEVRWGGAKHEPGEKDDGRKMHPRSSFK 553
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV-----DDRIEK 602
AFLEVVK RSLPW+D EMDAIHSLQLILR + +D A D VN ++ D +IE
Sbjct: 554 AFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSEAMD----VNTNAIHTKLNDLKIEG 609
Query: 603 IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAG 662
+ EL +T+EMVRLIETA+VPILAVD G VNGWN+K +ELT L VD+AIG L+ LV
Sbjct: 610 MQELEAVTSEMVRLIETASVPILAVDVDGLVNGWNTKISELTSLPVDKAIGMHLLTLVED 669
Query: 663 DSVDVVKNMLSSAF 676
S D VK ML A
Sbjct: 670 SSADTVKKMLHLAL 683
>gi|9049368|dbj|BAA99410.1| phytochrome A [Armoracia rusticana]
Length = 1122
Score = 904 bits (2335), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/684 (62%), Positives = 537/684 (78%), Gaps = 12/684 (1%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSST-SNVPS 61
S ++ + S S RS+ +AR+ AQT++DAKL DF+ES FDYSTSV ++ N P
Sbjct: 2 SGSRPSQSSEGSRRSRHSARIIAQTTVDAKLHADFEESGSSFDYSTSVRVTGPVVENQPP 61
Query: 62 ST---VSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
+ + YL +Q+G+LIQPFGC++A+DE+ F V+ YSENAPE+L +A HAVP++ +
Sbjct: 62 RSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMASHAVPSVGEHP 121
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
L +G D+R+LFT+ A+ALQKA FG+V+LLNPIL+HCKTS KPFYAI+HR+ +++D
Sbjct: 122 VLGIGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCKTSAKPFYAIVHRVTGSIIVD 181
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMA 241
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFHED+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A +V+
Sbjct: 242 YKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARVL 301
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD----NDQEQG 354
QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D Q Q
Sbjct: 302 QDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQK 361
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 362 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 421
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG TP+E +++IA WL EYH
Sbjct: 422 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSELHLQEIASWLYEYHTD 481
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P AL+LGDAVCG+AAV+I+ KD +FWFRSHTA E++WGGAKH+
Sbjct: 482 STGLSTDSLHDAGFPKALSLGDAVCGMAAVRISLKDMIFWFRSHTAGEVRWGGAKHNPDD 541
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAED-SKMIVN 592
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D + D + I++
Sbjct: 542 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESTDVNTNIIH 601
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AI
Sbjct: 602 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 661
Query: 653 GTALVDLVAGDSVDVVKNMLSSAF 676
G L+ LV SV++VK ML +A
Sbjct: 662 GKHLLTLVEDSSVEIVKRMLENAL 685
>gi|9049366|dbj|BAA99409.1| phytochrome A [Armoracia rusticana]
Length = 1122
Score = 900 bits (2327), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/684 (62%), Positives = 536/684 (78%), Gaps = 12/684 (1%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSST-SNVPS 61
S ++ + S S RS+ +AR+ AQT++DAKL DF+ES FDYSTSV ++ N P
Sbjct: 2 SGSRPSQSSEGSRRSRHSARIIAQTTVDAKLHADFEESGSSFDYSTSVRVTGPVVENQPP 61
Query: 62 ST---VSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
+ + YL +Q+G+LIQPFGC++A+DE+ F V+ YSEN+PE+L +A HAVP++ +
Sbjct: 62 RSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENSPELLTMASHAVPSVGEHP 121
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
L +G D+R+LFT+ A+ALQKA FG+V+LLNPIL+HCKTS KPFYAI+HR+ +++D
Sbjct: 122 VLGIGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCKTSAKPFYAIVHRVTGSIIVD 181
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMA 241
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFHED+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A +V+
Sbjct: 242 YKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARVL 301
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD----NDQEQG 354
QD+KL L+LCGSTLRAPH CH +YM NM SIAS VM+V +NE + E D Q Q
Sbjct: 302 QDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASHVMAVVVNEEDGEGDATDSTTQPQK 361
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 362 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 421
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG TP+E +++IA WL EYH
Sbjct: 422 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSELHLQEIASWLYEYHTD 481
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P AL+LGDAVCG+AAV+I+ KD +FWFRSHTA E++WGGAKH+
Sbjct: 482 STGLSTDSLHDAGFPKALSLGDAVCGMAAVRISLKDMIFWFRSHTAGEVRWGGAKHNPDD 541
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAED-SKMIVN 592
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D + D + I++
Sbjct: 542 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESTDVNTNIIH 601
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AI
Sbjct: 602 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 661
Query: 653 GTALVDLVAGDSVDVVKNMLSSAF 676
G L+ LV SV++VK ML +A
Sbjct: 662 GKHLLTLVEDSSVEIVKRMLENAL 685
>gi|340007753|gb|AEK26583.1| phytochrome A [Populus tremula]
Length = 1109
Score = 899 bits (2322), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/668 (64%), Positives = 530/668 (79%), Gaps = 14/668 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDESDFDYSTSVNISSSTS----NVPSS--TVSAYLQRVQRGRL 76
AR+ AQT++DAKL DF+ES + S ++ + S P S +AYL +Q+G+L
Sbjct: 20 ARIIAQTTVDAKLHADFEESGSSFDYSSSVRVTDSVGGDQPPRSDKVTTAYLHHIQKGKL 79
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGC++A+DE+ F V+ YSENAPE+L + HAVP++ + L +G D+RT+FT+ A+
Sbjct: 80 IQPFGCLLALDEKTFRVVAYSENAPELLTMVSHAVPSVGEHPVLGIGTDIRTIFTAPSAS 139
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
ALQKA FG+V+LLNPIL+HCKTSGKPFYAI+HR+ L+ID EPV P +VP+TAAGAL+
Sbjct: 140 ALQKAMGFGDVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQ 199
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDR M YKFH+D+HGEVV+E +P
Sbjct: 200 SYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRAMAYKFHDDDHGEVVSEVTKP 259
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
+EPYLG HYPATDIPQASRFL MKNKVRMI DC A VKV+QD+KL L+LCGSTLRA
Sbjct: 260 GMEPYLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVKVLQDEKLPFDLTLCGSTLRA 319
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDN----DQEQGRKLWGLVVCHHTSPRFVP 372
PH CH +YMENM SIASLVM+V +N+ +++ D + ++ ++LWGLVVCH+TSPRFVP
Sbjct: 320 PHSCHLQYMENMNSIASLVMAVVVNDGDEDGDTPDSANPQKRKRLWGLVVCHNTSPRFVP 379
Query: 373 FPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVM 432
FPLRYACEFL QVF + VNKE+EL Q+ EK+ILRTQT+LCDML+RD+P+GIVTQ+PN+M
Sbjct: 380 FPLRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLCDMLMRDAPLGIVTQSPNIM 439
Query: 433 DLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALA 492
DLVKCDGA L+YR K+W LG+TP++ Q++DIA WL EYH STGLSTDSL +AGYPGALA
Sbjct: 440 DLVKCDGAVLFYRNKIWRLGITPSDLQLQDIAFWLSEYHMDSTGLSTDSLYDAGYPGALA 499
Query: 493 LGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEV 552
LGD VCG+AAV+ITSKD LFWFRS TA EI+WGGAKH+ G KD GR+MHPRSSFKAFLEV
Sbjct: 500 LGDVVCGMAAVRITSKDMLFWFRSQTAAEIRWGGAKHEPGEKDDGRRMHPRSSFKAFLEV 559
Query: 553 VKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVNVPSVDDRIEKIDELRIITN 611
VK RSLPW+D EMDAIHSLQLILR + +D E + ++ D +IE + EL +T+
Sbjct: 560 VKTRSLPWKDYEMDAIHSLQLILRNTFKDIETMDVDTKTIHARLSDLKIEGMQELEAVTS 619
Query: 612 EMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNM 671
EMVRLIETA VPILAVD G VNGWN+K +ELTGL VD+AIG L+ LV SVD+VK M
Sbjct: 620 EMVRLIETATVPILAVDVDGLVNGWNTKISELTGLLVDKAIGKHLLTLVEDSSVDIVKRM 679
Query: 672 LSSAFLAI 679
L FLA+
Sbjct: 680 L---FLAL 684
>gi|224122788|ref|XP_002318913.1| phytochrome [Populus trichocarpa]
gi|222857289|gb|EEE94836.1| phytochrome [Populus trichocarpa]
Length = 1126
Score = 897 bits (2319), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/668 (64%), Positives = 529/668 (79%), Gaps = 14/668 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDESDFDYSTSVNISSSTS----NVPSS--TVSAYLQRVQRGRL 76
AR+ AQT++DAKL DF+ES + S ++ + S P S + YL +Q+G+L
Sbjct: 20 ARIIAQTTVDAKLHADFEESGSSFDYSSSVRVTDSVGGDQPPRSDKVTTTYLHHIQKGKL 79
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGC++A+DE+ F V+ YSENAPE+L + HAVP++ + L +G D+RT+FT+ A+
Sbjct: 80 IQPFGCLLALDEKTFKVVAYSENAPELLTMVSHAVPSVGEHPVLGIGTDIRTIFTAPSAS 139
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
ALQKA FG+V+LLNPIL+HCKTSGKPFYAI+HR+ L+ID EPV P +VP+TAAGAL+
Sbjct: 140 ALQKAMGFGDVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQ 199
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDR M YKFH+D+HGEVV+E +P
Sbjct: 200 SYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRAMAYKFHDDDHGEVVSEVTKP 259
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
+EPYLG HYPATDIPQASRFL MKNKVRMI DC A VKV+QD+KL L+LCGSTLRA
Sbjct: 260 GMEPYLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVKVLQDEKLPFDLTLCGSTLRA 319
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDN----DQEQGRKLWGLVVCHHTSPRFVP 372
PH CH +YMENM SIASLVM+V +N+ +++ D + ++ ++LWGLVVCH+TSPRFVP
Sbjct: 320 PHSCHLQYMENMNSIASLVMAVVVNDGDEDGDTPDSVNPQKRKRLWGLVVCHNTSPRFVP 379
Query: 373 FPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVM 432
FPLRYACEFL QVF + VNKE+EL Q+ EK+ILRTQT+LCDML+RD+P+GIVTQ+PN+M
Sbjct: 380 FPLRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLCDMLMRDAPLGIVTQSPNIM 439
Query: 433 DLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALA 492
DLVKCDGA L+YR K+W LG+TP++ Q++DIA WL EYH STGLSTDSL +AGYPGALA
Sbjct: 440 DLVKCDGAVLFYRNKIWRLGITPSDLQLQDIAFWLSEYHMDSTGLSTDSLYDAGYPGALA 499
Query: 493 LGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEV 552
LGD VCG+AAV+ITSKD LFWFRS TA EI+WGGAKH+ G KD GR+MHPRSSFKAFLEV
Sbjct: 500 LGDVVCGMAAVRITSKDMLFWFRSQTAAEIRWGGAKHEPGEKDDGRRMHPRSSFKAFLEV 559
Query: 553 VKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVNVPSVDDRIEKIDELRIITN 611
VK RSLPW+D EMDAIHSLQLILR + +D E + ++ D +IE + EL +T+
Sbjct: 560 VKTRSLPWKDYEMDAIHSLQLILRNAFKDIETMDVDTKTIHARLSDLKIEGMQELEAVTS 619
Query: 612 EMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNM 671
EMVRLIETA VPILAVD G VNGWN+K +ELTGL VD+AIG L+ LV SVD+VK M
Sbjct: 620 EMVRLIETATVPILAVDVDGLVNGWNTKISELTGLLVDKAIGKHLLTLVEDSSVDIVKRM 679
Query: 672 LSSAFLAI 679
L FLA+
Sbjct: 680 L---FLAL 684
>gi|76574169|gb|ABA46868.1| phytochrome A [Solanum tuberosum]
Length = 1123
Score = 897 bits (2319), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/668 (64%), Positives = 526/668 (78%), Gaps = 11/668 (1%)
Query: 20 KQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSN--VPSS--TVSAYLQRVQR 73
K +AR+ AQTSIDAKL DF+ES FDYS+SV ++S + P S +AYL ++Q+
Sbjct: 17 KHSARIIAQTSIDAKLHADFEESGDSFDYSSSVRVTSVAGDEERPKSDKVTTAYLHQIQK 76
Query: 74 GRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSS 133
G+ IQPFG ++A+DE+ V+ +SENAPEML + HAVP++ + L +G D+RT+FT
Sbjct: 77 GKFIQPFGSLLALDEKTLKVIAFSENAPEMLTMVSHAVPSVGEHPVLGIGTDIRTIFTGP 136
Query: 134 GAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAG 193
AALQKA FGEV+LLNP+L+HCK SGKPFYAI+HR+ L+ID EPV P +VP+TAAG
Sbjct: 137 SGAALQKALGFGEVSLLNPVLVHCKNSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAG 196
Query: 194 ALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAEC 253
AL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM YKFH+D+HGEVV+E
Sbjct: 197 ALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMGYKFHDDDHGEVVSEI 256
Query: 254 RRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGST 313
+P LEPYLG HYPATDIPQA+RFL MKNKVRMICDC A VKV+QD+KL L+LCGST
Sbjct: 257 TKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVVQDEKLPFDLTLCGST 316
Query: 314 LRAPHGCHARYMENMGSIASLVMSVTINEAEDE---LDNDQEQGRK-LWGLVVCHHTSPR 369
LRAPH CH +YMENM S+ASLVM+V +N+ ++E D+ Q Q RK LWGLVVCH+T+PR
Sbjct: 317 LRAPHYCHLQYMENMNSVASLVMAVVVNDGDEEGESSDSSQSQKRKRLWGLVVCHNTTPR 376
Query: 370 FVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTP 429
FVPFPLRYACEFL QVF + VNKE+EL Q EK+ILRTQT+LCDML+RD+P+GIV+Q+P
Sbjct: 377 FVPFPLRYACEFLAQVFAIHVNKELELENQFLEKNILRTQTLLCDMLMRDAPLGIVSQSP 436
Query: 430 NVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPG 489
N+MDLVKCDGAAL Y+ K+ LG+ P++ Q+ DI WL EYH STGLSTDSL +AG+PG
Sbjct: 437 NIMDLVKCDGAALLYKNKIHRLGMNPSDFQLHDIVSWLCEYHTDSTGLSTDSLYDAGFPG 496
Query: 490 ALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAF 549
ALALGDAVCG+AAV+I+ KD+LFW+RSHTA E++WGGAKH+ G KD GRKMHPRSSFKAF
Sbjct: 497 ALALGDAVCGMAAVRISDKDWLFWYRSHTAAEVRWGGAKHEPGEKDDGRKMHPRSSFKAF 556
Query: 550 LEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKM-IVNVPSVDDRIEKIDELRI 608
LEVVK RS+PW+D EMDAIHSLQLILR + +D A +S ++ D RI+ + EL
Sbjct: 557 LEVVKTRSIPWKDYEMDAIHSLQLILRNAFKDADAVNSNTNSIHTKLNDLRIDGMQELEA 616
Query: 609 ITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVV 668
+T EM+RLIETA+VPI AVD G VNGWN+K AELTGL VD+AIG L+ LV SVD V
Sbjct: 617 VTAEMIRLIETASVPIFAVDVDGQVNGWNTKVAELTGLPVDEAIGKHLLTLVEDSSVDTV 676
Query: 669 KNMLSSAF 676
ML A
Sbjct: 677 NKMLELAL 684
>gi|9049364|dbj|BAA99408.1| phytochrome A [Armoracia rusticana]
Length = 1122
Score = 897 bits (2318), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/684 (62%), Positives = 537/684 (78%), Gaps = 12/684 (1%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSST-SNVPS 61
S ++ + S S RS+ +AR+ AQT++DAKL DF+ES FDYSTSV ++ N P
Sbjct: 2 SGSRPSQSSEGSRRSRHSARIIAQTTVDAKLHADFEESGSSFDYSTSVRVTGPVVENQPP 61
Query: 62 ST---VSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
+ + YL +Q+G+LIQPFGC++A+DE+ F V+ YSENAPE+L +A HAVP++ +
Sbjct: 62 RSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMASHAVPSVGEHP 121
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
L +G D+R+LFT+ A+ALQKA FG+V+LLNPIL+HCKTS KPFYAI+HR+ +++D
Sbjct: 122 VLGIGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCKTSAKPFYAIVHRVTGSIIVD 181
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMA 241
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFHED+HGEVV+E +P +EPYLG HYPATDIPQA+RFL MKNKVRMI DC A +V+
Sbjct: 242 YKFHEDDHGEVVSEVTKPGMEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARVL 301
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD----NDQEQG 354
QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D Q Q
Sbjct: 302 QDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQK 361
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 362 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 421
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG TP+E +++IA WL EYH
Sbjct: 422 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLYEYHTD 481
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P AL+LGDAVCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 482 STGLSTDSLYDAGFPKALSLGDAVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDD 541
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAED-SKMIVN 592
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D + D + ++
Sbjct: 542 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESTDVNTKFIH 601
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AI
Sbjct: 602 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 661
Query: 653 GTALVDLVAGDSVDVVKNMLSSAF 676
G L+ LV SV++VK ML +A
Sbjct: 662 GKHLLTLVEDSSVEIVKRMLENAL 685
>gi|297849258|ref|XP_002892510.1| hypothetical protein ARALYDRAFT_471053 [Arabidopsis lyrata subsp.
lyrata]
gi|297338352|gb|EFH68769.1| hypothetical protein ARALYDRAFT_471053 [Arabidopsis lyrata subsp.
lyrata]
Length = 1122
Score = 897 bits (2318), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/684 (62%), Positives = 539/684 (78%), Gaps = 12/684 (1%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSST-SNVPS 61
S ++ S S RS+ +AR+ AQT++DAKL DF+ES FDYSTSV ++ N P
Sbjct: 2 SGSRPTQSSEGSRRSRHSARIIAQTTVDAKLHADFEESGSSFDYSTSVRVTGPVVENQPP 61
Query: 62 ST---VSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
+ + YL +Q+G+LIQPFGC++A+DE+ F V+ YSENA E+L +A HAVP++ +
Sbjct: 62 RSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENASELLTMASHAVPSVGEHP 121
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
L +G D+R+LFT+ A+ALQKA FG+V+LLNPIL+HCKTS KPFYAI+HR+ +++D
Sbjct: 122 VLGIGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCKTSAKPFYAIIHRVTGSIIVD 181
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMA 241
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFHED+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A +V+
Sbjct: 242 YKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARVL 301
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD----NDQEQG 354
QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D + Q Q
Sbjct: 302 QDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDASTQPQK 361
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 362 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQMLEKNILRTQTLLC 421
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GIV+Q+PN+MDLVKCDGAAL+Y+ K+W LG TP+E +++IA WL EYH
Sbjct: 422 DMLMRDAPLGIVSQSPNIMDLVKCDGAALFYKDKIWKLGTTPSEFHLQEIASWLCEYHMD 481
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P AL+LGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 482 STGLSTDSLHDAGFPKALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDD 541
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E + + +++
Sbjct: 542 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSETTDVNTNVIH 601
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL+VD+AI
Sbjct: 602 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEAI 661
Query: 653 GTALVDLVAGDSVDVVKNMLSSAF 676
G L+ LV SV++VK ML +A
Sbjct: 662 GKHLLTLVEDSSVEIVKRMLENAL 685
>gi|3914343|sp|O49934.1|PHYA_POPTM RecName: Full=Phytochrome A
gi|2664190|emb|CAA04679.1| phytochrome A [Populus tremula x Populus tremuloides]
Length = 1125
Score = 897 bits (2318), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/668 (64%), Positives = 530/668 (79%), Gaps = 14/668 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDESDFDYSTSVNISSSTS----NVPSS--TVSAYLQRVQRGRL 76
AR+ AQT++DAKL DF+ES + S ++ + S P S +AYL +Q+G+L
Sbjct: 20 ARIIAQTTVDAKLHADFEESGSSFDYSSSVRVTDSVGGDQPPRSDKVTTAYLHHIQKGKL 79
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGC++A+DE+ F V+ YSENAPE+L + HAVP++ + L +G D+RT+FT+ A+
Sbjct: 80 IQPFGCLLALDEKTFRVVAYSENAPELLTMVSHAVPSVGEHPVLGIGTDIRTIFTAPSAS 139
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
ALQKA FG+V+LLNPIL+HCKTSGKPFYAI+HR+ L+ID EPV P +VP+TAAGAL+
Sbjct: 140 ALQKAMGFGDVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQ 199
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDR M YKFH+D+HGEVV+E +P
Sbjct: 200 SYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRAMAYKFHDDDHGEVVSEVTKP 259
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
+EPYLG HYPATDIPQASRFL MKNKVRMI DC A VKV+QD+KL L+LCGSTLRA
Sbjct: 260 GMEPYLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVKVLQDEKLPFDLTLCGSTLRA 319
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDN----DQEQGRKLWGLVVCHHTSPRFVP 372
PH CH +YMENM SIASLVM+V +N+ +++ D + ++ ++LWGLVVCH+TSPRFVP
Sbjct: 320 PHSCHLQYMENMNSIASLVMAVVVNDGDEDGDTPDSANPQKRKRLWGLVVCHNTSPRFVP 379
Query: 373 FPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVM 432
FPLRYACEFL QVF + VNKE+EL Q+ EK+ILRTQT+LCDML+RD+P+GIVTQ+PN+M
Sbjct: 380 FPLRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLCDMLMRDAPLGIVTQSPNIM 439
Query: 433 DLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALA 492
DLVKCDGA L+YR K+W LG+TP++ Q++DIA WL EYH STGLSTDSL +AGYPGALA
Sbjct: 440 DLVKCDGAVLFYRNKIWRLGITPSDLQLQDIAFWLSEYHMDSTGLSTDSLYDAGYPGALA 499
Query: 493 LGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEV 552
LGD VCG+AAV+ITSKD LFWFRS TA EI+WGGAKH+ G KD GR+MHPRSSFKAFLEV
Sbjct: 500 LGDVVCGMAAVRITSKDMLFWFRSQTAAEIRWGGAKHEPGEKDDGRRMHPRSSFKAFLEV 559
Query: 553 VKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVNVPSVDDRIEKIDELRIITN 611
VK RSLPW+D EMDAIHSLQLILR + +D E + ++ D +IE + EL +T+
Sbjct: 560 VKTRSLPWKDYEMDAIHSLQLILRNTFKDIETMDVDTKTIHARLSDLKIEGMQELEAVTS 619
Query: 612 EMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNM 671
EMVRLIETA VPILAVD G VNGWN+K +ELTGL VD+AIG L+ LV SVD+VK M
Sbjct: 620 EMVRLIETATVPILAVDVDGLVNGWNTKISELTGLLVDKAIGKHLLTLVEDSSVDIVKRM 679
Query: 672 LSSAFLAI 679
L FLA+
Sbjct: 680 L---FLAL 684
>gi|130188|sp|P15001.1|PHYA_PEA RecName: Full=Phytochrome A
gi|169132|gb|AAA33682.1| phytochrome [Pisum sativum]
gi|295830|emb|CAA32242.1| phytochrome apoprotein [Pisum sativum]
gi|51173514|gb|AAT97643.1| phytochrome A apoprotein [Pisum sativum]
gi|226757|prf||1604466A phytochrome
Length = 1124
Score = 897 bits (2317), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/683 (62%), Positives = 536/683 (78%), Gaps = 11/683 (1%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESDFDYSTSVNISSSTS----NVP 60
ST + + S ++S RS+ +AR+ AQT++DAKL F+ES + S ++ S S P
Sbjct: 2 STTRPSQSSNNSGRSRNSARIIAQTTVDAKLHATFEESGSSFDYSSSVRVSGSVDGDQQP 61
Query: 61 SST--VSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
S +AYL +QRG+ IQPFGC++A+DE+ V+ YSENAPEML + HAVP++
Sbjct: 62 RSNKVTTAYLNHIQRGKQIQPFGCLLALDEKTCKVVAYSENAPEMLTMVSHAVPSVGDHP 121
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
AL +G D+RT+FT+ A+ALQKA F EV+LLNPIL+HCKTSGKPFYAI+HR+ L+ID
Sbjct: 122 ALGIGTDIRTVFTAPSASALQKALGFAEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIID 181
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
EPV P +VP+TAAGAL+SYKLAAKAI+RLQSL SG++ LCD +V EV +LTGYDRVM
Sbjct: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLASGSMERLCDTMVQEVFELTGYDRVMA 241
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFHED+HGEV+AE +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A VKV+
Sbjct: 242 YKFHEDDHGEVIAEIAKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVKVL 301
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ----EQG 354
QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +N+++++ D+ ++
Sbjct: 302 QDEKLPFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNDSDEDGDSADAVLPQKK 361
Query: 355 RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCD 414
++LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKE+EL Q+ EK+ILRTQT+LCD
Sbjct: 362 KRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEIELEYQILEKNILRTQTLLCD 421
Query: 415 MLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGS 474
ML+RD+P+GIV+Q+PN+MDLVKCDGAAL+YR KLWLLG TPTE Q+++IA W+ EYH S
Sbjct: 422 MLMRDAPLGIVSQSPNIMDLVKCDGAALFYRNKLWLLGATPTESQLREIALWMSEYHTDS 481
Query: 475 TGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGK 534
TGLSTDSL +AG+PGAL+L D VCG+AAV+ITSKD +FWFRSHTA EI+WGGAKH+ G +
Sbjct: 482 TGLSTDSLSDAGFPGALSLSDTVCGMAAVRITSKDIVFWFRSHTAAEIRWGGAKHEPGDQ 541
Query: 535 DGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVNV 593
D GRKMHPRSSFKAFLEVVK RS+PW+D EMDAIHSLQLILR + +D ++ + + +N
Sbjct: 542 DDGRKMHPRSSFKAFLEVVKARSVPWKDFEMDAIHSLQLILRNASKDTDIIDLNTKAINT 601
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +IE + EL +T+EMVRLIETA VPILAVD G VNGWN K AELTGL V +AIG
Sbjct: 602 RLNDLKIEGMQELEAVTSEMVRLIETATVPILAVDVDGTVNGWNIKIAELTGLPVGEAIG 661
Query: 654 TALVDLVAGDSVDVVKNMLSSAF 676
L+ LV S D+VK ML+ A
Sbjct: 662 KHLLTLVEDSSTDIVKKMLNLAL 684
>gi|327342186|gb|AEA50880.1| phyA [Populus tremula]
Length = 958
Score = 897 bits (2317), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/671 (63%), Positives = 532/671 (79%), Gaps = 14/671 (2%)
Query: 20 KQNARVAAQTSIDAKLAEDFDESDFDYSTSVNISSSTS----NVPSS--TVSAYLQRVQR 73
+ +AR+ AQT++DAKL DF+ES + S ++ + S P S +AYL +Q+
Sbjct: 17 EHSARIIAQTTVDAKLHADFEESGSSFDYSSSVRVTDSVGGDQPPRSDKVTTAYLHHIQK 76
Query: 74 GRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSS 133
G+LIQPFGC++A+DE+ F V+ YSENAPE+L + HAVP++ + L +G D+RT+FT+
Sbjct: 77 GKLIQPFGCLLALDEKTFRVVAYSENAPELLTMVSHAVPSVGEHPVLGIGTDIRTIFTAP 136
Query: 134 GAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAG 193
A+ALQKA FG+V+LLNPIL+HCKTSGKPFYAI+HR+ L+ID EPV P +VP+TAAG
Sbjct: 137 SASALQKAMGFGDVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAG 196
Query: 194 ALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAEC 253
AL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDR M YKFH+D+HGEVV+E
Sbjct: 197 ALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRAMAYKFHDDDHGEVVSEV 256
Query: 254 RRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGST 313
+P +EPYLG HYPATDIPQASRFL MKNKVRMI DC A VKV+QD+KL L+LCGST
Sbjct: 257 TKPGMEPYLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVKVLQDEKLPFDLTLCGST 316
Query: 314 LRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN----DQEQGRKLWGLVVCHHTSPR 369
LRAPH CH +YMENM SIASLVM+V +N+ +++ D + ++ ++LWGLVVCH+TSPR
Sbjct: 317 LRAPHSCHLQYMENMNSIASLVMAVVVNDGDEDGDTPDSANPQKRKRLWGLVVCHNTSPR 376
Query: 370 FVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTP 429
FVPFPLRYACEFL QVF + VNKE+EL Q+ EK+ILRTQT+LCDML+RD+P+GIVTQ+P
Sbjct: 377 FVPFPLRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLCDMLMRDAPLGIVTQSP 436
Query: 430 NVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPG 489
N+MDLVKCDGA L+YR K+W LG+TP++ Q++DIA WL EYH STGLSTDSL +AGYPG
Sbjct: 437 NIMDLVKCDGAVLFYRNKIWRLGITPSDLQLQDIAFWLSEYHMDSTGLSTDSLYDAGYPG 496
Query: 490 ALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAF 549
ALALGD VCG+AAV+ITSKD LFWFRS TA EI+WGGAKH+ G KD GR+MHPRSSFKAF
Sbjct: 497 ALALGDVVCGMAAVRITSKDMLFWFRSQTAAEIRWGGAKHEPGEKDDGRRMHPRSSFKAF 556
Query: 550 LEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVNVPSVDDRIEKIDELRI 608
LEVVK RSLPW+D EMDAIHSLQLILR + +D E + ++ D +IE + EL
Sbjct: 557 LEVVKTRSLPWKDYEMDAIHSLQLILRNTFKDIETMDVDTKTIHARLSDLKIEGMQELEA 616
Query: 609 ITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVV 668
+T+EMVRLIETA VPILAVD G VNGWN+K +ELTGL VD+AIG L+ LV SVD+V
Sbjct: 617 VTSEMVRLIETATVPILAVDVDGLVNGWNTKISELTGLLVDKAIGKHLLTLVEDSSVDIV 676
Query: 669 KNMLSSAFLAI 679
K ML FLA+
Sbjct: 677 KRML---FLAL 684
>gi|261865351|gb|ACY01932.1| phytochrome A [Beta vulgaris]
Length = 1125
Score = 895 bits (2314), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/685 (63%), Positives = 533/685 (77%), Gaps = 14/685 (2%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESDFDYSTSVNISSSTSNV----- 59
S++ + ++S RSK + R+ AQT +DAKL DF+ES ++ S ++ ++TS+
Sbjct: 2 SSSTPSQGSNNSGRSKHSVRIMAQTIVDAKLHADFEESSSEFDYSSSVRATTSSSAGKQP 61
Query: 60 PSS--TVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQ 117
P S S+YL ++Q+G+LIQPFGC++A+DE+ F V+ YS+NAPEML + HAVP++
Sbjct: 62 PKSDKVTSSYLLQIQKGKLIQPFGCLLALDEKTFRVVAYSDNAPEMLTMVSHAVPSVGDH 121
Query: 118 DALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVI 177
+ +G DVRT+FT+ A+ALQKA F +V+LLNPIL+HCKTSGKPFYAI+HR+ LVI
Sbjct: 122 PVIGIGTDVRTIFTAPSASALQKALGFADVSLLNPILVHCKTSGKPFYAIIHRVTGSLVI 181
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSGNIS L D +V EV +LTGYDRVM
Sbjct: 182 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGNISRLVDTMVQEVYELTGYDRVM 241
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEV++E +PDLEPYLG HYPATDIPQA+RFL MKNKVRMICDC A V+V
Sbjct: 242 AYKFHDDDHGEVISEITKPDLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKYVQV 301
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN----DQEQ 353
IQD+KL L+LCGSTLRAPHGCHA+YMENM SI SLVM+V +N+ EDE DN Q Q
Sbjct: 302 IQDEKLPFDLTLCGSTLRAPHGCHAQYMENMNSIGSLVMAVVVND-EDEDDNASAPPQSQ 360
Query: 354 GRK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
RK LWGLVVCHHTSPRFVPFPLRYACEFL QVF + VNKE+EL Q EK ILRTQT+L
Sbjct: 361 KRKRLWGLVVCHHTSPRFVPFPLRYACEFLAQVFAIHVNKELELENQFLEKKILRTQTLL 420
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDML+RD P+GIVTQ+PN+MDLVKCDGA L Y +W +GVTPT+ QI+DIA WL H+
Sbjct: 421 CDMLMRDVPLGIVTQSPNIMDLVKCDGAVLLYNSNIWKIGVTPTDYQIRDIAVWLSLDHQ 480
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AGYPGALALGD VCG+AAV+IT KD LFWFRSHTA E+KWGGAKH G
Sbjct: 481 DSTGLSTDSLYDAGYPGALALGDTVCGMAAVRITLKDMLFWFRSHTAAEVKWGGAKHQPG 540
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAED-SKMIV 591
KD G KMHPRSSFKAFLEVVK RS+PW+D EMDAIHSLQLILR + +D+ A D + ++
Sbjct: 541 EKDDGAKMHPRSSFKAFLEVVKNRSVPWKDFEMDAIHSLQLILRNAFKDKEAADLNTSVI 600
Query: 592 NVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
+ D +I+ EL +T EMVRLIETA VPI AVDA G VNGWN+K +ELTGL V +A
Sbjct: 601 HSKISDLKIDGYRELEAVTGEMVRLIETATVPIFAVDADGLVNGWNTKISELTGLPVTEA 660
Query: 652 IGTALVDLVAGDSVDVVKNMLSSAF 676
+G + LV S+D V+N+L A
Sbjct: 661 VGKHIAALVEDCSIDTVRNLLQLAL 685
>gi|240119379|dbj|BAH79238.1| phytochrome A [Cardamine nipponica]
Length = 1122
Score = 895 bits (2314), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/684 (63%), Positives = 537/684 (78%), Gaps = 12/684 (1%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSST-SNVPS 61
S ++ + S S RS+ +AR+ AQT++DAKL DF+ES FDYSTSV ++ N P
Sbjct: 2 SGSRPSQSSEGSRRSRHSARIIAQTTVDAKLHADFEESGSSFDYSTSVRVTGPVVENQPP 61
Query: 62 ST---VSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
+ + YL +Q+G+LIQPFGC++A+DE+ F V+ YSENAPE+L +A HAVP++ +
Sbjct: 62 RSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMASHAVPSVGEHP 121
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
L +G D+R+LFT+ A+ALQKA FG+V+LLNPIL+HCKTS KPFYAI+HR+ +++D
Sbjct: 122 VLGIGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCKTSAKPFYAIVHRVTGSIIVD 181
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMA 241
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFHED+HGEVV+E +P +EPYLG HYPATDIPQA+RFL MKNKVRMI DC A +V+
Sbjct: 242 YKFHEDDHGEVVSEVTKPGMEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARVL 301
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD----NDQEQG 354
QDKKL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D Q Q
Sbjct: 302 QDKKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQK 361
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 362 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 421
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG TP+E +++IA WL EYH
Sbjct: 422 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEYHTD 481
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+ KD +FWFRSHTA E++WGGAKHD
Sbjct: 482 STGLSTDSLHDAGFPKALALGDSVCGMAAVRISLKDVIFWFRSHTAGEVRWGGAKHDPDD 541
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAED-SKMIVN 592
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D + D + I++
Sbjct: 542 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESTDVNTKIIH 601
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AI
Sbjct: 602 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 661
Query: 653 GTALVDLVAGDSVDVVKNMLSSAF 676
G L+ LV SV++VK ML +A
Sbjct: 662 GKHLLTLVEDSSVEIVKRMLENAL 685
>gi|240119375|dbj|BAH79236.1| phytochrome A [Cardamine nipponica]
Length = 1122
Score = 895 bits (2313), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/684 (63%), Positives = 537/684 (78%), Gaps = 12/684 (1%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSST-SNVPS 61
S ++ + S S RS+ +AR+ AQT++DAKL DF+ES FDYSTSV ++ N P
Sbjct: 2 SGSRPSQSSEGSRRSRHSARIIAQTTVDAKLHADFEESGSSFDYSTSVRVTGPVVENQPP 61
Query: 62 ST---VSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
+ + YL +Q+G+LIQPFGC++A+DE+ F V+ YSENAPE+L +A HAVP++ +
Sbjct: 62 RSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMASHAVPSVGEHP 121
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
L +G D+R+LFT+ A+ALQKA FG+V+LLNPIL+HCKTS KPFYAI+HR+ +++D
Sbjct: 122 VLGIGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCKTSAKPFYAIVHRVTGSIIVD 181
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMA 241
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFHED+HGEVV+E +P +EPYLG HYPATDIPQA+RFL MKNKVRMI DC A +V+
Sbjct: 242 YKFHEDDHGEVVSEVTKPGMEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARVL 301
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD----NDQEQG 354
QDKKL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D Q Q
Sbjct: 302 QDKKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQK 361
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 362 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 421
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG TP+E +++IA WL EYH
Sbjct: 422 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEYHTD 481
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+ KD +FWFRSHTA E++WGGAKHD
Sbjct: 482 STGLSTDSLHDAGFPKALALGDSVCGMAAVRISLKDVIFWFRSHTAGEVRWGGAKHDPDD 541
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAED-SKMIVN 592
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D + D + I++
Sbjct: 542 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESTDVNTKIIH 601
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AI
Sbjct: 602 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 661
Query: 653 GTALVDLVAGDSVDVVKNMLSSAF 676
G L+ LV SV++VK ML +A
Sbjct: 662 GKHLLTLVEDSSVEIVKRMLENAL 685
>gi|464383|sp|P30733.2|PHYA_SOLTU RecName: Full=Phytochrome A
gi|7550158|gb|AAB21533.2| type A phytochrome [Solanum tuberosum]
Length = 1123
Score = 895 bits (2312), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/668 (63%), Positives = 524/668 (78%), Gaps = 11/668 (1%)
Query: 20 KQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNIS--SSTSNVPSS--TVSAYLQRVQR 73
K +AR+ AQTSIDAKL DF+ES FDYS+SV ++ + P S +AYL ++Q+
Sbjct: 17 KHSARIIAQTSIDAKLHADFEESGDSFDYSSSVRVTNVAEGEQRPKSDKVTTAYLHQIQK 76
Query: 74 GRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSS 133
G+ IQPFGC++A+DE+ V+ +SENAPEML + HAVP++ + L +GID+RT+FT
Sbjct: 77 GKFIQPFGCLLALDEKTLKVIAFSENAPEMLTMVSHAVPSVGEHPVLGIGIDIRTIFTGP 136
Query: 134 GAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAG 193
AALQKA FGEV+LLNP+L+HCK SGKPFYAI+HR+ L+ID EPV P +VP+TAAG
Sbjct: 137 SGAALQKALGFGEVSLLNPVLVHCKNSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAG 196
Query: 194 ALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAEC 253
AL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM YKFH+D+HGEVV+E
Sbjct: 197 ALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMGYKFHDDDHGEVVSEI 256
Query: 254 RRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGST 313
+P LEPYLG HYPATDIPQA+RFL MKNKVRMICDC A VKV+QD+KL L+LCGST
Sbjct: 257 TKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVVQDEKLPFDLTLCGST 316
Query: 314 LRAPHGCHARYMENMGSIASLVMSVTINEAEDE---LDNDQEQGRK-LWGLVVCHHTSPR 369
LRAPH CH +YMENM SIASLVM+V +N+ ++E D+ Q Q RK LWGLVV H+T+PR
Sbjct: 317 LRAPHYCHLQYMENMNSIASLVMAVVVNDGDEEGESSDSSQSQKRKRLWGLVVSHNTTPR 376
Query: 370 FVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTP 429
F PFPLRYACEFL QVF + VNKE+EL Q EK+ILRTQT+LCDML+RD+P+GIV+Q+P
Sbjct: 377 FAPFPLRYACEFLAQVFAILVNKELELENQFLEKNILRTQTLLCDMLMRDAPLGIVSQSP 436
Query: 430 NVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPG 489
N+MDL+KCDGAAL Y+ K+ LG+ P++ Q+ DI WL EYH STGLSTDSL +AG+PG
Sbjct: 437 NIMDLIKCDGAALLYKNKIHRLGMNPSDFQLHDIVSWLCEYHTDSTGLSTDSLYDAGFPG 496
Query: 490 ALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAF 549
ALALGDAVCG+AAV+I+ KD+LFW+RSHTA E++WGGAKH+ G KD GRKMHPRSSFK F
Sbjct: 497 ALALGDAVCGMAAVRISDKDWLFWYRSHTAAEVRWGGAKHEPGEKDDGRKMHPRSSFKGF 556
Query: 550 LEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMI-VNVPSVDDRIEKIDELRI 608
LEVVK RS+PW+D EMD IHSLQLILR + +D A +S I ++ D +I+ + EL
Sbjct: 557 LEVVKTRSIPWKDYEMDRIHSLQLILRNAFKDADAVNSNTISIHTKLNDLKIDGMQELEA 616
Query: 609 ITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVV 668
+T EMVRLIETA+VPI AVD G VNGWN+K AELTGL VD+AIG L+ LV SVD V
Sbjct: 617 VTAEMVRLIETASVPIFAVDVDGQVNGWNTKVAELTGLPVDEAIGKHLLTLVEDSSVDTV 676
Query: 669 KNMLSSAF 676
ML A
Sbjct: 677 NKMLELAL 684
>gi|240119373|dbj|BAH79235.1| phytochrome A [Cardamine nipponica]
Length = 1122
Score = 894 bits (2311), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/684 (62%), Positives = 537/684 (78%), Gaps = 12/684 (1%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSST-SNVPS 61
S ++ + S S RS+ +AR+ AQT++DAKL DF+ES FDYSTSV ++ N P
Sbjct: 2 SGSRPSQSSEGSRRSRHSARIIAQTTVDAKLHADFEESGSSFDYSTSVRVTGPVVENQPP 61
Query: 62 ST---VSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
+ + YL +Q+G+LIQPFGC++A+DE+ F V+ YSENAPE+L +A HAVP++ +
Sbjct: 62 RSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMASHAVPSVGEHP 121
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
L +G D+R+LFT+ A+ALQKA FG+V+LLNPIL+HCKTS KPFYAI+HR+ +++D
Sbjct: 122 VLGIGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCKTSAKPFYAIVHRVTGSIIVD 181
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMA 241
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFHED+HGEVV+E +P +EPYLG HYPATDIPQA+RFL MKNKVRMI DC A +V+
Sbjct: 242 YKFHEDDHGEVVSEVTKPGMEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARVL 301
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD----NDQEQG 354
QDKKL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D Q Q
Sbjct: 302 QDKKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQK 361
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 362 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 421
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DM++RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG TP+E +++IA WL EYH
Sbjct: 422 DMMMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEYHTD 481
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+ KD +FWFRSHTA E++WGGAKHD
Sbjct: 482 STGLSTDSLHDAGFPKALALGDSVCGMAAVRISLKDVIFWFRSHTAGEVRWGGAKHDPDD 541
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAED-SKMIVN 592
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D + D + I++
Sbjct: 542 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESTDVNTKIIH 601
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AI
Sbjct: 602 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 661
Query: 653 GTALVDLVAGDSVDVVKNMLSSAF 676
G L+ LV SV++VK ML +A
Sbjct: 662 GKHLLTLVEDSSVEIVKRMLENAL 685
>gi|240119389|dbj|BAH79243.1| phytochrome A [Cardamine resedifolia]
Length = 1122
Score = 894 bits (2311), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/684 (62%), Positives = 538/684 (78%), Gaps = 12/684 (1%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSST-SNVPS 61
S ++ + S S RS+ +AR+ AQT++DAKL DF+ES FDYSTSV ++ N P
Sbjct: 2 SGSRPSQSSEGSRRSRHSARIIAQTTVDAKLHADFEESGSSFDYSTSVRVTGPVVENQPP 61
Query: 62 ST---VSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
+ + YL +Q+G+LIQPFGC++A+DE+ F V+ YSENAPE+L +A HAVP++ +
Sbjct: 62 RSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMASHAVPSVGEHP 121
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
L +G D+R+LFT+ A+ALQKA FG+V+LLNPIL+HCKTS KPFYAI+HR+ +++D
Sbjct: 122 VLGIGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCKTSAKPFYAIVHRVTGSIIVD 181
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGY+RVM
Sbjct: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYERVMA 241
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFHED+HGEVV+E +P +EPYLG HYPATDIPQA+RFL MKNKVRMI DC A +V+
Sbjct: 242 YKFHEDDHGEVVSEVTKPGMEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARVL 301
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD----NDQEQG 354
QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D Q Q
Sbjct: 302 QDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQK 361
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 362 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 421
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG TP+E +++IA WL EYH
Sbjct: 422 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEYHTD 481
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 482 STGLSTDSLHDAGFPKALALGDSVCGMAAVRISSKDVIFWFRSHTAGEVRWGGAKHDPDD 541
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAED-SKMIVN 592
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D + D + I++
Sbjct: 542 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESTDVNTKIIH 601
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AI
Sbjct: 602 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 661
Query: 653 GTALVDLVAGDSVDVVKNMLSSAF 676
G L+ LV SV++V+ ML +A
Sbjct: 662 GKHLLTLVEDSSVEIVRRMLENAL 685
>gi|240119381|dbj|BAH79239.1| phytochrome A [Cardamine nipponica]
gi|240119383|dbj|BAH79240.1| phytochrome A [Cardamine nipponica]
gi|240119387|dbj|BAH79242.1| phytochrome A [Cardamine nipponica]
Length = 1122
Score = 894 bits (2310), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/684 (62%), Positives = 537/684 (78%), Gaps = 12/684 (1%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSST-SNVPS 61
S ++ + S S RS+ +AR+ AQT++DAKL DF++S FDYSTSV ++ N P
Sbjct: 2 SGSRPSQSSEGSRRSRHSARIIAQTTVDAKLHADFEDSGSSFDYSTSVRVTGPVVENQPP 61
Query: 62 ST---VSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
+ + YL +Q+G+LIQPFGC++A+DE+ F V+ YSENAPE+L +A HAVP++ +
Sbjct: 62 RSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMASHAVPSVGEHP 121
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
L +G D+R+LFT+ A+ALQKA FG+V+LLNPIL+HCKTS KPFYAI+HR+ +++D
Sbjct: 122 VLGIGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCKTSAKPFYAIVHRVTGSIIVD 181
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMA 241
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFHED+HGEVV+E +P +EPYLG HYPATDIPQA+RFL MKNKVRMI DC A +V+
Sbjct: 242 YKFHEDDHGEVVSEVTKPGMEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARVL 301
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD----NDQEQG 354
QDKKL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D Q Q
Sbjct: 302 QDKKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQK 361
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 362 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 421
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG TP+E +++IA WL EYH
Sbjct: 422 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEYHTD 481
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+ KD +FWFRSHTA E++WGGAKHD
Sbjct: 482 STGLSTDSLHDAGFPKALALGDSVCGMAAVRISLKDVIFWFRSHTAGEVRWGGAKHDPDD 541
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAED-SKMIVN 592
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D + D + I++
Sbjct: 542 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESTDVNTKIIH 601
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AI
Sbjct: 602 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 661
Query: 653 GTALVDLVAGDSVDVVKNMLSSAF 676
G L+ LV SV++VK ML +A
Sbjct: 662 GKHLLTLVEDSSVEIVKRMLENAL 685
>gi|401782502|dbj|BAM36554.1| phytochrome A [Fragaria x ananassa]
Length = 1124
Score = 894 bits (2310), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/669 (65%), Positives = 522/669 (78%), Gaps = 19/669 (2%)
Query: 23 ARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTS--NVPSS--TVSAYLQRVQRGRL 76
ARV AQT++DAKL +F+ES FDYS SV +SS + P S +AYL +Q+G+L
Sbjct: 20 ARVIAQTTVDAKLHANFEESGSSFDYSNSVRVSSEVTGDQQPRSDKVTTAYLHHIQKGKL 79
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGC++A+D++ F V+ YSENAPEML + HAVP++ L +G DVRT+FT A+
Sbjct: 80 IQPFGCLLALDDKTFRVIAYSENAPEMLTMVSHAVPSVGDHPVLGIGTDVRTIFTGPSAS 139
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
AL KA FGEV+LLNPIL+HCK+SGKPFYAI+HR+ LVID EPV P +VP+TAAGAL+
Sbjct: 140 ALHKALGFGEVSLLNPILVHCKSSGKPFYAIVHRVTGSLVIDFEPVKPYEVPMTAAGALQ 199
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM YKFH+D+HGEVVAE +
Sbjct: 200 SYKLAAKAIARLQSLPSGSLERLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVVAELTKT 259
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
LEPYLG HYP+TDIPQASRFL MKNKVRMI DC A VKV+QD+KL L+LCGSTLRA
Sbjct: 260 GLEPYLGLHYPSTDIPQASRFLFMKNKVRMIVDCCAKNVKVLQDEKLPLDLTLCGSTLRA 319
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDEL---DNDQEQGRK-LWGLVVCHHTSPRFVP 372
PH CH +YMENM SIASLVM+V INE + E+ D+ Q Q RK LWGLVVCH+T+PRFVP
Sbjct: 320 PHSCHLQYMENMNSIASLVMAVVINEGDYEVAGPDSAQTQKRKRLWGLVVCHNTTPRFVP 379
Query: 373 FPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVM 432
FPLRYACEFL QVF + VNKE+EL Q+ EK+ILRTQT+LCDMLLRD+P+GIV+QTPN+M
Sbjct: 380 FPLRYACEFLAQVFAIHVNKELELEDQMIEKNILRTQTLLCDMLLRDAPLGIVSQTPNIM 439
Query: 433 DLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALA 492
DLVKCDGAAL Y+ K+W LG+TP++ QI+DI+ WL E H STGLSTDSL +AG+PGALA
Sbjct: 440 DLVKCDGAALLYKNKIWRLGLTPSDFQIQDISLWLSECHMDSTGLSTDSLYDAGFPGALA 499
Query: 493 LGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEV 552
LGD CG+AAVKITSKD +FWFRSHTA EI+WGGAKHD KD G KMHPRSSFKAFLEV
Sbjct: 500 LGDVACGMAAVKITSKDIIFWFRSHTAAEIRWGGAKHDPDEKDNGWKMHPRSSFKAFLEV 559
Query: 553 VKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV-----DDRIEKIDELR 607
K RSLPW+D EMDAIHSLQLILR + +D M VN + D +I+ + EL
Sbjct: 560 AKTRSLPWKDYEMDAIHSLQLILRNAFKDV----GDMAVNNNGIQMQLSDLKIDGVQELE 615
Query: 608 IITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDV 667
+T EMVRLIETA+VPILAVD G+VNGWN+K +ELTGL VD+AIG L+ LV S +
Sbjct: 616 AVTGEMVRLIETASVPILAVDIEGSVNGWNTKISELTGLPVDKAIGKNLLTLVEESSTSM 675
Query: 668 VKNMLSSAF 676
V ML A
Sbjct: 676 VGRMLELAL 684
>gi|15217562|ref|NP_172428.1| phytochrome A [Arabidopsis thaliana]
gi|6093714|sp|P14712.2|PHYA_ARATH RecName: Full=Phytochrome A; AltName: Full=Protein ELONGATED
HYPOCOTYL 8; AltName: Full=Protein FAR RED ELONGATED 1;
AltName: Full=Protein FAR RED ELONGATED HYPOCOTYL 2
gi|404670|gb|AAA21351.1| phytochrome A [Arabidopsis thaliana]
gi|3482934|gb|AAC33219.1| phytochrome A [Arabidopsis thaliana]
gi|14517372|gb|AAK62577.1| At1g09570/F14J9_27 [Arabidopsis thaliana]
gi|332190341|gb|AEE28462.1| phytochrome A [Arabidopsis thaliana]
Length = 1122
Score = 893 bits (2308), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/684 (62%), Positives = 534/684 (78%), Gaps = 12/684 (1%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSST-SNVPS 61
S ++ S S RS+ +AR+ AQT++DAKL DF+ES FDYSTSV ++ N P
Sbjct: 2 SGSRPTQSSEGSRRSRHSARIIAQTTVDAKLHADFEESGSSFDYSTSVRVTGPVVENQPP 61
Query: 62 ST---VSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
+ + YL +Q+G+LIQPFGC++A+DE+ F V+ YSENA E+L +A HAVP++ +
Sbjct: 62 RSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENASELLTMASHAVPSVGEHP 121
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
L +G D+R+LFT+ A+ALQKA FG+V+LLNPIL+HC+TS KPFYAI+HR+ ++ID
Sbjct: 122 VLGIGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCRTSAKPFYAIIHRVTGSIIID 181
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMA 241
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFHED+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A +V+
Sbjct: 242 YKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARVL 301
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD----NDQEQG 354
QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D Q Q
Sbjct: 302 QDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDATTQPQK 361
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 362 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELDNQMVEKNILRTQTLLC 421
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG TP+E +++IA WL EYH
Sbjct: 422 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEYHMD 481
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P AL+LGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 482 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDD 541
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D D V
Sbjct: 542 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSETTDVNTKVIY 601
Query: 594 PSVDD-RIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
++D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL+VD+AI
Sbjct: 602 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEAI 661
Query: 653 GTALVDLVAGDSVDVVKNMLSSAF 676
G + LV SV++VK ML +A
Sbjct: 662 GKHFLTLVEDSSVEIVKRMLENAL 685
>gi|406685647|gb|AFS51264.1| phytochrome P, partial [Picea mariana]
Length = 656
Score = 893 bits (2308), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/614 (69%), Positives = 507/614 (82%), Gaps = 3/614 (0%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQ--DALTLG 123
AYL R+QRG IQPFGC++AV+E F ++ YSENA EMLDLAP +VP++EQ + LT+G
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAVEMLDLAPQSVPSMEQPQLEVLTIG 60
Query: 124 IDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVN 183
DVRTLFT++ A +L+KAA E++L+NPI +HCK S KPFYAI+HRIDVG+VID EP+
Sbjct: 61 TDVRTLFTAASAHSLEKAAVAQEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDFEPLK 120
Query: 184 PDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHE 243
D V+AAGA++S KLA +AISRLQSLP G+I LLCD +V V +LTGYDRVMVYKFHE
Sbjct: 121 TGDAFVSAAGAVQSQKLAVRAISRLQSLPCGDIELLCDSVVENVRELTGYDRVMVYKFHE 180
Query: 244 DEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKL 303
DEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC+A PV+VIQ ++L
Sbjct: 181 DEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVQVIQSEEL 240
Query: 304 DQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVC 363
QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN +DE KLWGLVVC
Sbjct: 241 MQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIINGNDDEGAGSGRNSMKLWGLVVC 300
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HHTSPR VPFPLRYACEF++Q FG+Q+N E++L+AQL EKHILRTQT+LCDMLLRD+P+G
Sbjct: 301 HHTSPRAVPFPLRYACEFMMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRDAPIG 360
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+P++MDLVKCDGAALYY G W+LGVTPTE QIKDIA+WLLE+H STGLSTDSL
Sbjct: 361 IVTQSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTDSLA 420
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
+AGYPGA +LGDAVCG+A+ +ITSK+FLFWFRSHTAKE+KWGGAKH KD GR+MHPR
Sbjct: 421 DAGYPGAASLGDAVCGMASARITSKEFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPR 480
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAFLEVVK+RSLPW++VE+DAIHSLQLILRGS QD +K +V+ D R++ I
Sbjct: 481 SSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDIDDSGTKTMVHSRLNDLRLQGI 540
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + +EMVRLIETA PILAVD +G VNGWN+K AELTGL V +A+G +LV DLV
Sbjct: 541 DELSSVASEMVRLIETATAPILAVDYNGLVNGWNAKVAELTGLPVGEAMGMSLVQDLVLE 600
Query: 663 DSVDVVKNMLSSAF 676
+SV+ VK ML +A
Sbjct: 601 ESVERVKKMLCNAI 614
>gi|240119385|dbj|BAH79241.1| phytochrome A [Cardamine nipponica]
Length = 1122
Score = 893 bits (2308), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/684 (62%), Positives = 537/684 (78%), Gaps = 12/684 (1%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSST-SNVPS 61
S ++ + S S RS+ +AR+ AQT++DAKL DF++S FDYSTSV ++ N P
Sbjct: 2 SGSRPSQSSEGSRRSRHSARIIAQTTVDAKLHADFEDSGSSFDYSTSVRVTGPVVENQPP 61
Query: 62 ST---VSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
+ + YL +Q+G+LIQPFGC++A+DE+ F V+ YSENAPE+L +A HAVP++ +
Sbjct: 62 RSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMASHAVPSVGEHP 121
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
L +G D+R+LFT+ A+ALQKA FG+V+LLNPIL+HCKTS KPFYAI+HR+ +++D
Sbjct: 122 VLGIGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCKTSAKPFYAIVHRVTGSIIVD 181
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMA 241
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFHED+HGEVV+E +P +EPYLG HYPATDIPQA+RFL MKNKVRMI DC A +V+
Sbjct: 242 YKFHEDDHGEVVSEVTKPGMEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARVL 301
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD----NDQEQG 354
QDKKL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D Q Q
Sbjct: 302 QDKKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQK 361
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 362 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 421
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG TP+E +++IA WL EYH
Sbjct: 422 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIATWLCEYHTD 481
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+ KD +FWFRSHTA E++WGGAKHD
Sbjct: 482 STGLSTDSLHDAGFPKALALGDSVCGMAAVRISLKDVIFWFRSHTAGEVRWGGAKHDPDD 541
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAED-SKMIVN 592
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D + D + I++
Sbjct: 542 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESTDVNTKIIH 601
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AI
Sbjct: 602 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 661
Query: 653 GTALVDLVAGDSVDVVKNMLSSAF 676
G L+ LV SV++VK ML +A
Sbjct: 662 GKHLLTLVEDSSVEIVKRMLENAL 685
>gi|406685649|gb|AFS51265.1| phytochrome P, partial [Pinus strobus]
Length = 656
Score = 893 bits (2308), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/614 (69%), Positives = 508/614 (82%), Gaps = 3/614 (0%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ--QDALTLG 123
AYL R+QRG +IQPFGC++AV+E F ++ YSENA EMLDLAP +VP++EQ Q+ LT+G
Sbjct: 1 AYLSRIQRGGIIQPFGCVLAVEETTFRIIAYSENAVEMLDLAPQSVPSMEQSQQEVLTIG 60
Query: 124 IDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVN 183
DVRT FT++ + +L+KAA E++L+NPI +HCK S KPFYAI+HRIDVG+VIDLEP+
Sbjct: 61 TDVRTQFTAASSHSLEKAAVTQEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDLEPLR 120
Query: 184 PDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHE 243
D ++AAGA++S KLA +AISRLQSLP G+I LLCD +V V +LTGYDRVMVYKFHE
Sbjct: 121 TGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDIGLLCDTVVENVRELTGYDRVMVYKFHE 180
Query: 244 DEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKL 303
DEHGEVV E RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC+A PVKVIQ ++L
Sbjct: 181 DEHGEVVFEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQSEEL 240
Query: 304 DQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVC 363
QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN +DE KLWGLVVC
Sbjct: 241 MQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIINGNDDEGGGSGRNSMKLWGLVVC 300
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HHTSPR VPFPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LCDMLLR +P+G
Sbjct: 301 HHTSPRPVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRHAPMG 360
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+P++MDLVKCDGAALYY GK W+LGVTPTE QIKDIA+WLLE+H STGLSTDSL
Sbjct: 361 IVTQSPSIMDLVKCDGAALYYGGKCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTDSLA 420
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
+AGYPGA +LGDAVCG+A+ +ITSKDF+FWFRSHTAKE+KWGGAKH KD GR+MHPR
Sbjct: 421 DAGYPGAASLGDAVCGMASARITSKDFIFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPR 480
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAFLEVVK+RSLPW++VE+DAIHSLQLILRGS QD +K +V+ D R++ I
Sbjct: 481 SSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDIDDSGTKTMVHSQLNDLRLQGI 540
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + +EMVRLIETA PILAVD +G VNGWN+K AELTGL V +A+G +LV DLV
Sbjct: 541 DELSSVASEMVRLIETATAPILAVDYNGCVNGWNAKVAELTGLPVGEAMGMSLVQDLVFE 600
Query: 663 DSVDVVKNMLSSAF 676
+SV+ V+ ML +A
Sbjct: 601 ESVESVEKMLYNAL 614
>gi|16421|emb|CAA35221.1| unnamed protein product [Arabidopsis thaliana]
Length = 1122
Score = 893 bits (2307), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/684 (62%), Positives = 534/684 (78%), Gaps = 12/684 (1%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSST-SNVPS 61
S ++ S S RS+ +AR+ AQT++DAKL DF+ES FDYSTSV ++ N P
Sbjct: 2 SGSRPTQSSEGSRRSRHSARIIAQTTVDAKLHADFEESGSSFDYSTSVRVTGPVVENQPP 61
Query: 62 ST---VSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
+ + YL +Q+G+LIQPFGC++A+DE+ F V+ YSENA E+L +A HAVP++ +
Sbjct: 62 RSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENASELLTMASHAVPSVGEHP 121
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
L +G D+R+LFT+ A+ALQKA FG+V+LLNPIL+HC+TS KPFYAI+HR+ ++ID
Sbjct: 122 VLGIGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCRTSAKPFYAIIHRVTGSIIID 181
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 182 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMA 241
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFHED+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A +V+
Sbjct: 242 YKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARVL 301
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD----NDQEQG 354
QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D Q Q
Sbjct: 302 QDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDATTQPQK 361
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 362 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELDNQMVEKNILRTQTLLC 421
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG TP+E +++IA WL EYH
Sbjct: 422 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEYHMD 481
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P AL+LGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 482 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDD 541
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D D V
Sbjct: 542 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSETTDVNTKVIY 601
Query: 594 PSVDD-RIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
++D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL+VD+AI
Sbjct: 602 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEAI 661
Query: 653 GTALVDLVAGDSVDVVKNMLSSAF 676
G + LV SV++VK ML +A
Sbjct: 662 GKHFLTLVEDSSVEIVKRMLENAL 685
>gi|406685633|gb|AFS51257.1| phytochrome P, partial [Cedrus libani]
Length = 656
Score = 893 bits (2307), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/614 (69%), Positives = 505/614 (82%), Gaps = 3/614 (0%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ--QDALTLG 123
AYL R+QRG IQPFGC++AV+E F ++ YSENA EMLDL +VP++EQ + LT+G
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAVEMLDLVSQSVPSMEQPQSEVLTIG 60
Query: 124 IDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVN 183
DVRTLF ++ A +L+KAA E++L+NPI +HCK S KPFYAI+HRIDVG+VID EP+
Sbjct: 61 TDVRTLFIAASAHSLEKAAMAQEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDFEPLK 120
Query: 184 PDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHE 243
D ++AAGA++S KLA +AISRLQSLP G+I LLCD +V V +LTGYDRVMVYKFHE
Sbjct: 121 TGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDIGLLCDTVVENVRELTGYDRVMVYKFHE 180
Query: 244 DEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKL 303
DEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC+APPVKVIQ ++L
Sbjct: 181 DEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCIAPPVKVIQSEEL 240
Query: 304 DQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVC 363
QPL L GSTLRAPHGCHA+YM NMGS+ASLVM+V IN +DE KLWGLVVC
Sbjct: 241 MQPLCLVGSTLRAPHGCHAQYMANMGSVASLVMAVIINGNDDEGGGSGRNSMKLWGLVVC 300
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HHTSPR VPFPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LCDMLLRD+P+G
Sbjct: 301 HHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRDAPIG 360
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+P++MDLVKCDGAALYY G W+LGVTPTE QIKDIA+WLLE+H STGLSTDSL
Sbjct: 361 IVTQSPSIMDLVKCDGAALYYGGMCWMLGVTPTETQIKDIADWLLEHHCDSTGLSTDSLA 420
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
+AGYPGA +LGDAVCG+A+ +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPR
Sbjct: 421 DAGYPGAASLGDAVCGMASARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPR 480
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAFLEVVK+RSLPW++VE+DAIHSLQLILRGS QD +K +V+ D R++ I
Sbjct: 481 SSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDIDDSSTKTMVHARLNDLRLQGI 540
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+G +LV DLV
Sbjct: 541 DELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGMSLVQDLVLE 600
Query: 663 DSVDVVKNMLSSAF 676
+SV+ V ML +A
Sbjct: 601 ESVERVDKMLDNAI 614
>gi|130185|sp|P06592.1|PHYA_CUCPE RecName: Full=Phytochrome A
gi|167501|gb|AAA33115.1| phytochrome [Cucurbita pepo]
gi|225435|prf||1303260A phytochrome
Length = 1124
Score = 892 bits (2306), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/666 (63%), Positives = 527/666 (79%), Gaps = 13/666 (1%)
Query: 24 RVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTS--NVPSS--TVSAYLQRVQRGRLI 77
R+ AQTS+DA + DF+ES FDYS+SV ++S S P S +AYL +Q+G+LI
Sbjct: 21 RIIAQTSVDANVQADFEESGNSFDYSSSVRVTSDVSGDQQPRSDKVTTAYLHHIQKGKLI 80
Query: 78 QPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAA 137
QPFGC++A+D++ F V+ YSENAPEML + HAVP++ L +G DVRT+FT+ A+A
Sbjct: 81 QPFGCLLALDDKTFKVIAYSENAPEMLTMVSHAVPSMGDYPVLGIGTDVRTIFTAPSASA 140
Query: 138 LQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKS 197
L KA FGEV LLNPIL+HCKTSGKPFYAI+HR+ L+ID EPV P + PVTAAGAL+S
Sbjct: 141 LLKALGFGEVTLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEGPVTAAGALQS 200
Query: 198 YKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPD 257
YKLAAKAI+RLQSLPSG+++ LCD +V EV +LTGYDRVM YKFH+D+HGEV++E +P
Sbjct: 201 YKLAAKAITRLQSLPSGSMARLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVISEVAKPG 260
Query: 258 LEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAP 317
L+PYLG HYPATDIPQA+RFL MKNKVRMI DC A +KV+QD+KL L+LCGSTLRAP
Sbjct: 261 LQPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRAKHLKVLQDEKLQFDLTLCGSTLRAP 320
Query: 318 HGCHARYMENMGSIASLVMSVTINEAEDELDN---DQEQGRKLWGLVVCHHTSPRFVPFP 374
H CH +YMENM SIASLVM+V +NE ++E + Q++ ++LWGLVVCH++SPRFVPFP
Sbjct: 321 HSCHLQYMENMNSIASLVMAVVVNEGDEENEGPALQQQKRKRLWGLVVCHNSSPRFVPFP 380
Query: 375 LRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDL 434
LRYACEFL QVF + VNKE+EL Q+ EK+ILRTQT+LCDML+RD+P+GIV+++PN+MDL
Sbjct: 381 LRYACEFLAQVFAIHVNKELELENQIIEKNILRTQTLLCDMLMRDAPLGIVSRSPNIMDL 440
Query: 435 VKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALG 494
VK DGAAL Y+ K+W LG+TP + Q+ DIA WL EYH STGLSTDSL +AGYPGA+ALG
Sbjct: 441 VKSDGAALLYKKKIWRLGLTPNDFQLLDIASWLSEYHMDSTGLSTDSLYDAGYPGAIALG 500
Query: 495 DAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVK 554
D VCG+AAV+IT+ D +FWFRSHTA EI+WGGAKH+ G KD RKMHPRSSFKAFLEVVK
Sbjct: 501 DEVCGMAAVRITNNDMIFWFRSHTASEIRWGGAKHEHGQKDDARKMHPRSSFKAFLEVVK 560
Query: 555 QRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVNVPSVDDRIEKIDELRIITNEM 613
RSLPW+D EMDAIHSLQLILR + +D + E ++ + D +IE EL +T+EM
Sbjct: 561 TRSLPWKDYEMDAIHSLQLILRNTFKDTDATEINRKSIQTTLGDLKIEGRQELESVTSEM 620
Query: 614 VRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLS 673
VRLIETA VPILAVD G +NGWN+K AELTGL VD+AIG L+ LV SV+VV+ ML
Sbjct: 621 VRLIETATVPILAVDLDGLINGWNTKIAELTGLPVDKAIGKHLLTLVEDSSVEVVRKML- 679
Query: 674 SAFLAI 679
FLA+
Sbjct: 680 --FLAL 683
>gi|240119377|dbj|BAH79237.1| phytochrome A [Cardamine nipponica]
Length = 1122
Score = 892 bits (2306), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/684 (62%), Positives = 536/684 (78%), Gaps = 12/684 (1%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSST-SNVPS 61
S ++ + S S RS+ +AR+ AQT++DAKL DF+ES FDYSTSV ++ N P
Sbjct: 2 SGSRPSQSSEGSRRSRHSARIIAQTTVDAKLHADFEESGSSFDYSTSVRVTGPVVENQPP 61
Query: 62 ST---VSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
+ + YL +Q+G+LIQPFGC++A+DE+ F V+ YSENAPE+L +A HAVP++ +
Sbjct: 62 RSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMASHAVPSVGEHP 121
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
L +G D+R+LFT+ A+ALQKA FG+V+LLNPIL+HCKTS KPFYAI+HR+ +++D
Sbjct: 122 VLGIGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCKTSAKPFYAIVHRVTGSIIVD 181
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
EPV P +V +TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 182 FEPVKPYEVSMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMA 241
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFHED+HGEVV+E +P +EPYLG HYPATDIPQA+RFL MKNKVRMI DC A +V+
Sbjct: 242 YKFHEDDHGEVVSEVTKPGMEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARVL 301
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD----NDQEQG 354
QDKKL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D Q Q
Sbjct: 302 QDKKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQK 361
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 362 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 421
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG TP+E +++IA WL EYH
Sbjct: 422 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEYHTD 481
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+ KD +FWFRSHTA E++WGGAKHD
Sbjct: 482 STGLSTDSLHDAGFPKALALGDSVCGMAAVRISLKDVIFWFRSHTAGEVRWGGAKHDPDD 541
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAED-SKMIVN 592
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D + D + I++
Sbjct: 542 RDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESTDVNTKIIH 601
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AI
Sbjct: 602 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 661
Query: 653 GTALVDLVAGDSVDVVKNMLSSAF 676
G L+ LV SV++VK ML +A
Sbjct: 662 GKHLLTLVEDSSVEIVKRMLENAL 685
>gi|37779202|gb|AAO86643.1| PHYA2 photoreceptor [Stellaria longipes]
Length = 935
Score = 892 bits (2306), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/684 (62%), Positives = 530/684 (77%), Gaps = 15/684 (2%)
Query: 3 SKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSN-V 59
++S N TN S RSK +AR+ AQT DAKL +F+ES +FDYS+SV S+S N +
Sbjct: 5 AQSQNSTN-----SGRSKHSARIIAQTIQDAKLHAEFEESSNEFDYSSSVRGSTSGVNQL 59
Query: 60 PSS--TVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQ 117
P S S+YL ++Q+G+ IQPFGC++A+D++ F V+ +SENAPEML + HAVP++
Sbjct: 60 PKSDKVTSSYLLQIQKGKFIQPFGCLLALDDKTFRVIAFSENAPEMLTMVSHAVPSVGDL 119
Query: 118 DALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVI 177
+ +G D+RT+FT A+ALQKA F +V+LLNPIL+HCK GKPFYAI+HR+ LVI
Sbjct: 120 PVIGIGTDIRTIFTGPSASALQKALGFTDVSLLNPILVHCKNPGKPFYAIVHRVTRSLVI 179
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSGN+ L D +V EV +LTGYDRVM
Sbjct: 180 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGNMDRLVDTMVQEVFELTGYDRVM 239
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P+L+ YLG HYPATDIPQA+RFL MKNKVR+ICDC A V+V
Sbjct: 240 AYKFHDDDHGEVVSEVTKPNLDSYLGLHYPATDIPQAARFLFMKNKVRLICDCRAKNVRV 299
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDND---QEQG 354
+QD+KL L+LCGSTLRAPHGCHA+YMENM SI SLVM+V +N+ +DE Q
Sbjct: 300 VQDEKLSVDLTLCGSTLRAPHGCHAQYMENMNSIGSLVMAVVVNDEDDEDGGSAPAQPHK 359
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCHHTSPRFVPFPLRYACEFL QVF + VNKE+EL Q EK ILRTQT+LC
Sbjct: 360 RKRLWGLVVCHHTSPRFVPFPLRYACEFLAQVFAIHVNKELELENQFLEKKILRTQTLLC 419
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GIVTQ+PN+MDLVKCDGAAL Y K+W LG+TPT+ Q+++I WL H
Sbjct: 420 DMLMRDAPLGIVTQSPNIMDLVKCDGAALLYNNKVWRLGITPTDYQLQEIGGWLSRDHMD 479
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYP AL LGD+VCG+AAV+IT D LFWFRSHTA EIKWGGAKH++G
Sbjct: 480 STGLSTDSLYDAGYPAALELGDSVCGMAAVRITVNDMLFWFRSHTAAEIKWGGAKHEAGE 539
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
KD G KMHPRSSFKAFLEVVK+RS+PW+D EMDAIHSLQLILR + +D E A+ + +++
Sbjct: 540 KDDGSKMHPRSSFKAFLEVVKRRSVPWKDYEMDAIHSLQLILRNAFKDGEAADLNTSVIH 599
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I + EL +T+EMVRLIETA VPI AVD+ G VNGWN+K ELTG+ V++A+
Sbjct: 600 SKISDLQISGLKELEAVTSEMVRLIETATVPIFAVDSDGLVNGWNTKIYELTGIPVEEAV 659
Query: 653 GTALVDLVAGDSVDVVKNMLSSAF 676
G + LV S+D VK ML SA
Sbjct: 660 GKHIAALVEDSSIDNVKQMLQSAL 683
>gi|1125699|gb|AAC49128.1| phytochrome [Mesotaenium caldariorum]
gi|1587953|prf||2207374B phytochrome photoreceptor
Length = 1142
Score = 892 bits (2305), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/697 (61%), Positives = 540/697 (77%), Gaps = 27/697 (3%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSV--NISSSTS 57
++ + S S+A++K+ RVA Q + DAKL F+ S FDY+ SV ++++ +
Sbjct: 3 TSRMSQSSGESTAKTKREVRVA-QATADAKLNTAFEASAAVGGSFDYTKSVGASLNAGSE 61
Query: 58 NVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQ 117
+PSS V+AYLQR+QRG + Q FGCM+ V+E +F V +SENA EMLDL P AVP++ QQ
Sbjct: 62 AIPSSAVTAYLQRMQRGGITQTFGCMLMVEEGSFRVRAFSENAGEMLDLVPQAVPSMGQQ 121
Query: 118 DALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVI 177
+ +G D+RTLFTS+ + L+KAA +V+++NP+ + + + KPF+A+LHRIDVGLV+
Sbjct: 122 SLIAVGTDIRTLFTSASVSLLEKAAMATDVSVMNPVSLQSRAAKKPFFAVLHRIDVGLVV 181
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPV P D V+AAGA++S+KLAAKAISRLQSLP G+I LLCD +V EV +LTGYDRVM
Sbjct: 182 DLEPVRPSDPNVSAAGAMQSHKLAAKAISRLQSLPGGDIGLLCDAVVEEVRELTGYDRVM 241
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFHEDEHGEV+AE RR DLEPYLG HYPATDIPQA+RFL MKN+VR+ICDC APPVKV
Sbjct: 242 AYKFHEDEHGEVIAEIRRSDLEPYLGLHYPATDIPQAARFLFMKNRVRIICDCSAPPVKV 301
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ-----E 352
IQD + P+SL GSTLR HGCHA+YM NMGS+ASLVM+V IN+ E
Sbjct: 302 IQDPTMKHPISLAGSTLRGVHGCHAQYMANMGSVASLVMAVIINDNSSEEGATAAGGILH 361
Query: 353 QGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
+GRKLWGLVVCHH+SPR+VPFPLR ACEFL+QVFG+Q+N EVELS+QLREKHILRTQT+L
Sbjct: 362 KGRKLWGLVVCHHSSPRYVPFPLRSACEFLMQVFGLQLNMEVELSSQLREKHILRTQTLL 421
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDMLLRD+P+GIV+Q+PN+ DLVKCDGAAL+Y G+ WLLGVTP+E Q++DIA WLL+ H+
Sbjct: 422 CDMLLRDAPMGIVSQSPNITDLVKCDGAALFYHGRAWLLGVTPSEAQVRDIAAWLLDSHK 481
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AGYP A +LG +VCG+AA +ITSKDFLFWFRSH KE+KW GAK + G
Sbjct: 482 DSTGLSTDSLADAGYPNADSLGVSVCGMAAARITSKDFLFWFRSHAQKEVKWAGAKQEPG 541
Query: 533 ------GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD----- 581
G++GGR MHPRSSF+AFLEVVKQRSLPWEDVEMDAIHSLQLILRGS QD
Sbjct: 542 DRDREEGEEGGR-MHPRSSFQAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSFQDMEGEG 600
Query: 582 -EVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKA 640
+ +K ++N D +++ +DEL + NEMVRLIETA PILAVD+ G VNGWN+K
Sbjct: 601 GGSQQGNKRMINARLNDLKLQGMDELSTVANEMVRLIETATAPILAVDSLGCVNGWNAKV 660
Query: 641 AELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
+ELTGL V +A+G +LV DLV +S + V+ +L A
Sbjct: 661 SELTGLPVSEAMGKSLVKDLVQRESREAVERVLYMAL 697
>gi|357441993|ref|XP_003591274.1| Phytochrome A [Medicago truncatula]
gi|355480322|gb|AES61525.1| Phytochrome A [Medicago truncatula]
Length = 1171
Score = 892 bits (2305), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/683 (62%), Positives = 534/683 (78%), Gaps = 11/683 (1%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESDFDYSTSVNISSST----SNVP 60
ST + + S ++S RS+ +AR+ AQT++DAKL F+ES + S ++ S + P
Sbjct: 49 STTRPSQSSNNSGRSRNSARIIAQTTVDAKLHATFEESGSSFDYSSSVRVSGSVDGEHQP 108
Query: 61 SST--VSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
S +AYL +QRG+ IQPFGC++A+DE+ V+ YSENAPEML + HAVP++
Sbjct: 109 RSNKVTTAYLNTIQRGKQIQPFGCLLALDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHP 168
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
AL +G D+RT+FT+ A+ALQKA F EV+LLNPIL+HCKTSGKPFYAI+HR+ L+ID
Sbjct: 169 ALGIGTDIRTIFTAPSASALQKALGFAEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIID 228
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 229 FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMA 288
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFHED+HGEV+AE + LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A VKV+
Sbjct: 289 YKFHEDDHGEVIAEVTKTGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCHAKHVKVL 348
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ----EQG 354
QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +N+++++ D+ ++
Sbjct: 349 QDEKLPFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNDSDEDGDSADAVLPQKK 408
Query: 355 RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCD 414
++LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKE+EL Q+ EK+ILRTQT+LCD
Sbjct: 409 KRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEIELEFQILEKNILRTQTLLCD 468
Query: 415 MLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGS 474
ML+RD+P+GIV+Q+PN+MDLVKCDGAAL YR KLW+LG TP+E QI++IA W+ EYH S
Sbjct: 469 MLMRDAPLGIVSQSPNIMDLVKCDGAALLYRNKLWILGATPSEPQIREIALWMSEYHTDS 528
Query: 475 TGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGK 534
TGLSTDSL +AG+PGAL L D VCG+AAV+ITSKD +FWFRSHTA EI+WGGAKH+ G +
Sbjct: 529 TGLSTDSLSDAGFPGALKLNDTVCGMAAVRITSKDIVFWFRSHTAAEIRWGGAKHEPGEQ 588
Query: 535 DGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVNV 593
D GRKMHPRSSFKAFLEVVK RS+PW+D EMDAIHSLQLILR + +D ++ + + +N
Sbjct: 589 DDGRKMHPRSSFKAFLEVVKARSIPWKDFEMDAIHSLQLILRNASKDTDMIDLNSKAINT 648
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +IE + EL +T+EMVRLIETA VPILAVD G VNGWN K +ELTGL V +AIG
Sbjct: 649 RLNDLKIEGMQELEAVTSEMVRLIETATVPILAVDVDGMVNGWNIKISELTGLPVGEAIG 708
Query: 654 TALVDLVAGDSVDVVKNMLSSAF 676
L+ LV S D+VK ML+ A
Sbjct: 709 KHLLTLVEDSSTDIVKKMLNLAL 731
>gi|449458035|ref|XP_004146753.1| PREDICTED: phytochrome A-like [Cucumis sativus]
Length = 1123
Score = 892 bits (2305), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/663 (65%), Positives = 528/663 (79%), Gaps = 10/663 (1%)
Query: 24 RVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTS--NVPSS--TVSAYLQRVQRGRLI 77
R+ AQTS+DAKL DF+ES FDYS+SV +SS S + P S +AYL +Q+G+LI
Sbjct: 21 RIIAQTSVDAKLHADFEESGNSFDYSSSVRVSSDVSGDHQPRSDKVTTAYLHHIQKGKLI 80
Query: 78 QPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAA 137
QPFGC++A+DE+ F V+ YSENAPEML + HAVP++ L +G DVRT+FT+ A+A
Sbjct: 81 QPFGCLLALDEKTFKVIAYSENAPEMLTMVSHAVPSMGDYPVLGIGTDVRTIFTAPSASA 140
Query: 138 LQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKS 197
L KA FGEV LLNPIL+HCKTSGKPFYAI+HR+ L+ID EPV P +VPVTAAGAL+S
Sbjct: 141 LLKALGFGEVTLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPVTAAGALQS 200
Query: 198 YKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPD 257
YKLAAKAI+RLQSLPSG ++ LCD +V EV +LTGYDRVM YKFH+D+HGEV++E +P
Sbjct: 201 YKLAAKAITRLQSLPSGCMARLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVISEVTKPG 260
Query: 258 LEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAP 317
LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A +KV+QD+KL L+LCGSTLRAP
Sbjct: 261 LEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRAKHLKVLQDEKLQFDLTLCGSTLRAP 320
Query: 318 HGCHARYMENMGSIASLVMSVTINEAEDELDN---DQEQGRKLWGLVVCHHTSPRFVPFP 374
H CH +YM NM SIASLVM+V +NE +++ + Q++ ++LWGLVVCH+TSPRFVPFP
Sbjct: 321 HSCHLQYMANMNSIASLVMAVVVNEGDEDAEGPALQQQKRKRLWGLVVCHNTSPRFVPFP 380
Query: 375 LRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDL 434
LRYACEFL QVF + VNKE+EL Q+ EK+ILRTQT+LCDML+RD+P+GIV+++PN+MDL
Sbjct: 381 LRYACEFLAQVFAIHVNKELELENQIIEKNILRTQTLLCDMLMRDAPLGIVSRSPNIMDL 440
Query: 435 VKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALG 494
VK DGAAL Y+ K+W LG+TP++ ++DIA WL EYH STGLSTDSL +AGYPGALALG
Sbjct: 441 VKSDGAALLYKNKIWRLGMTPSDFHLRDIASWLAEYHMDSTGLSTDSLYDAGYPGALALG 500
Query: 495 DAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVK 554
D VCG+AAV+IT+ D +FWFRSHTA EI+WGGAKH+ G KD GRKMHPRSSFKAFLEVVK
Sbjct: 501 DEVCGMAAVRITTNDMIFWFRSHTASEIRWGGAKHEHGEKDDGRKMHPRSSFKAFLEVVK 560
Query: 555 QRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVNVPSVDDRIEKIDELRIITNEM 613
RSLPW+D EMDAIHSLQLILR + +D + E ++ + + D +IE EL +T+EM
Sbjct: 561 TRSLPWKDYEMDAIHSLQLILRNTFKDTDTDEINRKSIQMTLGDLKIEGRQELESVTSEM 620
Query: 614 VRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLS 673
VRLIETA VPILAVD G +NGWN+K AELTGL VD+AIG L+ LV SV+VVK ML
Sbjct: 621 VRLIETATVPILAVDVDGLINGWNTKIAELTGLPVDKAIGKHLLTLVEDTSVEVVKKMLY 680
Query: 674 SAF 676
A
Sbjct: 681 LAL 683
>gi|6226671|sp|P42496.2|PHY_ADICA RecName: Full=Phytochrome 1
gi|3327373|dbj|BAA31710.1| phytochrome [Adiantum capillus-veneris]
gi|3337115|dbj|BAA31856.1| phytochrome 1 [Adiantum capillus-veneris]
Length = 1118
Score = 890 bits (2301), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/658 (64%), Positives = 515/658 (78%), Gaps = 8/658 (1%)
Query: 24 RVAAQTSIDAKLAEDFDESD----FDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLIQP 79
R AQTS DAKL ++ES FDYS SV S+ + S V+AYLQR+QRG L+Q
Sbjct: 20 RRIAQTSADAKLYAAYEESSESGSFDYSQSV--SAGKEGISSQLVTAYLQRMQRGGLVQQ 77
Query: 80 FGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQ 139
FGC+IAV+E+ F VL Y NAPEMLD+A AVP + Q L +G DVRTL + + A+AL
Sbjct: 78 FGCLIAVEEETFRVLAYGANAPEMLDVATQAVPTMGQYSRLCIGADVRTLLSPASASALD 137
Query: 140 KAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYK 199
+ +V++ NPI + ++SGKPFYAILHR DVGLVIDLEP+ PDD +T GAL+S+K
Sbjct: 138 RVIGVVDVSMFNPITVQSRSSGKPFYAILHRNDVGLVIDLEPIRPDDASITG-GALQSHK 196
Query: 200 LAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLE 259
LAAKAI+RLQSLP G+I LLCD +V EV +LTG+DRVM YKFHEDEHGEVVAE RR DLE
Sbjct: 197 LAAKAIARLQSLPGGDIGLLCDSVVEEVHELTGFDRVMAYKFHEDEHGEVVAEIRRTDLE 256
Query: 260 PYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHG 319
PY+G HYPATDIPQA+RFL MKN+VRMICDC PPVK+IQDK L QP+SL GS LRAPHG
Sbjct: 257 PYIGLHYPATDIPQAARFLFMKNRVRMICDCRLPPVKLIQDKTLSQPMSLTGSKLRAPHG 316
Query: 320 CHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYAC 379
CH +YM NM SI+SLVM+V +N+++D+ QG KLWGLVVCHHTSPR+VPFP+R AC
Sbjct: 317 CHTQYMANMNSISSLVMAVIVNDSDDDSPGHSSQGIKLWGLVVCHHTSPRYVPFPVRSAC 376
Query: 380 EFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDG 439
EFL+QVF +Q+N EV ++AQ+REKHILRTQT+LCDMLLRD+P+GIV+Q+PN+MDLV CDG
Sbjct: 377 EFLMQVFSLQLNMEVGMAAQVREKHILRTQTLLCDMLLRDAPIGIVSQSPNIMDLVTCDG 436
Query: 440 AALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCG 499
AALYY K WLLG TPTE QI DIA WLL+ H+ STGLSTDSL + GYP A LGDAVCG
Sbjct: 437 AALYYGKKCWLLGTTPTEAQIVDIAAWLLDCHKDSTGLSTDSLAKTGYPEASCLGDAVCG 496
Query: 500 IAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLP 559
+AA KIT+ DFLFWFRSHTAKE++WGGA+HD +D GR+MHPRSSFKAFLEVVKQ+SLP
Sbjct: 497 LAAAKITATDFLFWFRSHTAKEVRWGGARHDPEERDDGRRMHPRSSFKAFLEVVKQQSLP 556
Query: 560 WEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIET 619
WEDVEMDAIHSLQLILRGS QD ++K +++ D +++ +DEL + +EMVRLIET
Sbjct: 557 WEDVEMDAIHSLQLILRGSFQDIDDSNTKTMIHARLNDLKLQGLDELSTVASEMVRLIET 616
Query: 620 AAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
A PILAVD G +NGWN K AELTGL+ + A+G +L +LV +S +V+ +L A
Sbjct: 617 ATAPILAVDGQGLINGWNGKVAELTGLSFETAMGKSLAKELVHEESKTIVERVLHLAL 674
>gi|406685635|gb|AFS51258.1| phytochrome P, partial [Larix decidua]
Length = 655
Score = 890 bits (2301), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/614 (69%), Positives = 508/614 (82%), Gaps = 3/614 (0%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQ--DALTLG 123
AYL R+QRG IQPFGC++AV+E F ++ YSENA EMLDLAP +VP++EQ + LT+G
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAVEMLDLAPQSVPSMEQPQPEFLTIG 60
Query: 124 IDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVN 183
DVRTLFT++ A +L+KAA E++L+NPI +HCK S KPFYAI+HRIDVG+VID EP+
Sbjct: 61 TDVRTLFTAASAHSLEKAAVAQEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDFEPLK 120
Query: 184 PDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHE 243
D ++AAGA++S KLA +AISRLQSLP G+I LLCD +V V +LTGY+RVMVYKFHE
Sbjct: 121 TGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDIGLLCDTVVENVRELTGYERVMVYKFHE 180
Query: 244 DEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKL 303
DEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC+A PVKVIQ ++L
Sbjct: 181 DEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQSEEL 240
Query: 304 DQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVC 363
QPL L GSTLRAPHGCHA+YM NMGS+ASLVM+V IN +DE KLWGLVVC
Sbjct: 241 MQPLCLVGSTLRAPHGCHAQYMANMGSVASLVMAVIINGNDDEGGGSGRNSMKLWGLVVC 300
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HHTSPR VPFPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LCDMLLRD+P+G
Sbjct: 301 HHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRDAPMG 360
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+P++MDLVKCDGAALYY G W+LGVTPTE QIKDIA+WLLE+H STGLSTDSL
Sbjct: 361 IVTQSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTDSLA 420
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
+AGYPGA +LGDAVCG+A+ +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPR
Sbjct: 421 DAGYPGAASLGDAVCGMASARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPR 480
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAFLEVVK+RSLPW++VE+DAIHSLQLILRGS QD +K +V+ D R++ +
Sbjct: 481 SSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDIDDSGTKTMVHSRLNDLRLQGM 540
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+G +LV DLV
Sbjct: 541 DELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLVQDLVFE 600
Query: 663 DSVDVVKNMLSSAF 676
+SV+ V+ ML +A
Sbjct: 601 ESVERVEKMLYNAL 614
>gi|406685659|gb|AFS51270.1| phytochrome P, partial [Tsuga caroliniana]
Length = 656
Score = 890 bits (2301), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/614 (69%), Positives = 505/614 (82%), Gaps = 3/614 (0%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQ--DALTLG 123
AYL R+QRG IQPFGC++AV+E F ++ YSENA EMLDLAP +VP++EQ +ALT+G
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAVEMLDLAPQSVPSMEQPQPEALTIG 60
Query: 124 IDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVN 183
DVRTLFT++ A +L++AA E++L+NPI +HCK S KPFYAI+HRIDVG+VID EP+
Sbjct: 61 TDVRTLFTAASAHSLERAAVAQEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDFEPLR 120
Query: 184 PDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHE 243
D ++AAGA++S KLA +AISRLQSLP G+I LLCD +V V +LTGYDRVMVYKFHE
Sbjct: 121 TGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDIGLLCDTVVENVRELTGYDRVMVYKFHE 180
Query: 244 DEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKL 303
DEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC+A PVKVIQ ++L
Sbjct: 181 DEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQSEEL 240
Query: 304 DQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVC 363
QPL L GSTLRAPHGCHA+YM NMGS+ASLVM+V IN +DE KLWGLVVC
Sbjct: 241 MQPLCLVGSTLRAPHGCHAQYMANMGSVASLVMAVIINGNDDEAGGSGRNSMKLWGLVVC 300
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HHTSPR VPFPLRYACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+G
Sbjct: 301 HHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIG 360
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+P++MDLVKCDGAALYY G W+LGVTPTE QIKDIA+WLLE+H STGLST SL
Sbjct: 361 IVTQSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTGSLA 420
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
+AGYPGA +LGDAVCG+A+ ITSKDFLFWFRSHTAKE+KWGGAKH KD GRKMHPR
Sbjct: 421 DAGYPGAASLGDAVCGMASAIITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRKMHPR 480
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAFLEVVK+RSLPW++VE+DAIHSLQLILRGS QD +K +V D R++ I
Sbjct: 481 SSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDIDDSGTKTMVRARLNDLRLQGI 540
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DE + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+G +LV DLV
Sbjct: 541 DERSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGMSLVQDLVFE 600
Query: 663 DSVDVVKNMLSSAF 676
+SV+ V+ ML +A
Sbjct: 601 ESVERVEKMLYNAL 614
>gi|406685641|gb|AFS51261.1| phytochrome P, partial [Larix laricina]
Length = 655
Score = 890 bits (2299), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/614 (68%), Positives = 507/614 (82%), Gaps = 3/614 (0%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQ--DALTLG 123
AYL R+QRG +QPFGC++AV+E F ++ YSENA EMLDLAP +VP++EQ + LT+G
Sbjct: 1 AYLSRIQRGGRMQPFGCVLAVEETTFRIIAYSENAVEMLDLAPQSVPSMEQPQPEVLTIG 60
Query: 124 IDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVN 183
DVRTLFT++ A +L+KAA E++L+NPI +HCK S KPFYAI+HRIDVG+VID EP+
Sbjct: 61 TDVRTLFTAASAHSLEKAAVAQEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDFEPLK 120
Query: 184 PDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHE 243
D ++AAGA++S KLA +AISRLQSLP G+I LLCD +V V +LTGY+RVMVYKFHE
Sbjct: 121 TGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDIGLLCDTVVENVRELTGYERVMVYKFHE 180
Query: 244 DEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKL 303
DEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC+A PVKVIQ ++L
Sbjct: 181 DEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQSEEL 240
Query: 304 DQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVC 363
QPL L GSTLRAPHGCHA+YM NMGS+ASLVM+V IN +DE KLWGLVVC
Sbjct: 241 MQPLCLVGSTLRAPHGCHAQYMANMGSVASLVMAVIINGNDDEGGGSGRNSMKLWGLVVC 300
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HHTSPR VPFPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LCDMLLRD+P+G
Sbjct: 301 HHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRDAPMG 360
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+P++MDLVKCDGAALYY G W+LGVTPTE QIKDIA+WLLE+H STGLSTDSL
Sbjct: 361 IVTQSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTDSLA 420
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
+AGYPGA +LGDAVCG+A+ +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPR
Sbjct: 421 DAGYPGAASLGDAVCGMASARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPR 480
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAFLEVVK+RSLPW++VE+DAIHSLQLILRGS QD +K +V+ D R++ +
Sbjct: 481 SSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDIDDSGTKTMVHSRLNDLRLQGM 540
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+G +LV DLV
Sbjct: 541 DELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLVQDLVFE 600
Query: 663 DSVDVVKNMLSSAF 676
SV+ V+ ML +A
Sbjct: 601 QSVERVEKMLYNAL 614
>gi|449505651|ref|XP_004162532.1| PREDICTED: LOW QUALITY PROTEIN: phytochrome A-like [Cucumis
sativus]
Length = 1123
Score = 889 bits (2298), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/663 (64%), Positives = 527/663 (79%), Gaps = 10/663 (1%)
Query: 24 RVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTS--NVPSS--TVSAYLQRVQRGRLI 77
R+ AQTS+DAKL DF+ES FDYS+SV +SS S + P S +AYL +Q+G+LI
Sbjct: 21 RIIAQTSVDAKLHADFEESGNSFDYSSSVRVSSDVSGDHQPRSDKVTTAYLHHIQKGKLI 80
Query: 78 QPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAA 137
QPFGC++A+D + F V+ YSENAPEML + HAVP++ L +G DVRT+FT+ A+A
Sbjct: 81 QPFGCLLALDXKTFKVIAYSENAPEMLTMVSHAVPSMGDYPVLGIGTDVRTIFTAPSASA 140
Query: 138 LQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKS 197
L KA FGEV LLNPIL+HCKTSGKPFYAI+HR+ L+ID EPV P +VPVTAAGAL+S
Sbjct: 141 LLKALGFGEVTLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPVTAAGALQS 200
Query: 198 YKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPD 257
YKLAAKAI+RLQSLPSG ++ LCD +V EV +LTGYDRVM YKFH+D+HGEV++E +P
Sbjct: 201 YKLAAKAITRLQSLPSGCMARLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVISEVTKPG 260
Query: 258 LEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAP 317
LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A +KV+QD+KL L+LCGSTLRAP
Sbjct: 261 LEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRAKHLKVLQDEKLQFDLTLCGSTLRAP 320
Query: 318 HGCHARYMENMGSIASLVMSVTINEAEDELDN---DQEQGRKLWGLVVCHHTSPRFVPFP 374
H CH +YM NM SIASLVM+V +NE +++ + Q++ ++LWGLVVCH+TSPRFVPFP
Sbjct: 321 HSCHLQYMANMNSIASLVMAVVVNEGDEDAEGPALQQQKRKRLWGLVVCHNTSPRFVPFP 380
Query: 375 LRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDL 434
LRYACEFL QVF + VNKE+EL Q+ EK+ILRTQT+LCDML+RD+P+GIV+++PN+MDL
Sbjct: 381 LRYACEFLAQVFAIHVNKELELENQIIEKNILRTQTLLCDMLMRDAPLGIVSRSPNIMDL 440
Query: 435 VKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALG 494
VK DGAAL Y+ K+W LG+TP++ ++DIA WL EYH STGLSTDSL +AGYPGALALG
Sbjct: 441 VKSDGAALLYKNKIWRLGMTPSDFHLRDIASWLAEYHMDSTGLSTDSLYDAGYPGALALG 500
Query: 495 DAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVK 554
D VCG+AAV+IT+ D +FWFRSHTA EI+WGGAKH+ G KD GRKMHPRSSFKAFLEVVK
Sbjct: 501 DEVCGMAAVRITTNDMIFWFRSHTASEIRWGGAKHEHGEKDDGRKMHPRSSFKAFLEVVK 560
Query: 555 QRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVNVPSVDDRIEKIDELRIITNEM 613
RSLPW+D EMDAIHSLQLILR + +D + E ++ + + D +IE EL +T+EM
Sbjct: 561 TRSLPWKDYEMDAIHSLQLILRNTFKDTDTDEINRKSIQMTLGDLKIEGRQELESVTSEM 620
Query: 614 VRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLS 673
VRLIETA VPILAVD G +NGWN+K AELTGL VD+AIG L+ LV SV+VVK ML
Sbjct: 621 VRLIETATVPILAVDVDGLINGWNTKIAELTGLPVDKAIGKHLLTLVEDTSVEVVKKMLY 680
Query: 674 SAF 676
A
Sbjct: 681 LAL 683
>gi|406685653|gb|AFS51267.1| phytochrome P, partial [Pseudolarix amabilis]
Length = 656
Score = 889 bits (2298), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/614 (69%), Positives = 504/614 (82%), Gaps = 3/614 (0%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQ--DALTLG 123
AYL R+QRG IQPFGC++AV+E F ++ YSENA EMLDLAP +VP++EQ + LT+G
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEEITFRIIAYSENAVEMLDLAPQSVPSMEQPQPETLTIG 60
Query: 124 IDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVN 183
DVRTLFT++ A +L+KAA E++LLNPI +HCK S KPFYAI+HRIDVG+VID EP+
Sbjct: 61 TDVRTLFTAASAHSLEKAALAQEISLLNPIWVHCKNSRKPFYAIVHRIDVGMVIDFEPLR 120
Query: 184 PDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHE 243
D ++AAGA++S KLA +AISRLQSLP G+I LLCD +V V +LTGYDRVMVYKFHE
Sbjct: 121 TGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDIGLLCDTVVENVRELTGYDRVMVYKFHE 180
Query: 244 DEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKL 303
DEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC+A PVKVIQ ++L
Sbjct: 181 DEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQSEEL 240
Query: 304 DQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVC 363
QPL L GSTLRAPHGCHA+YM NMGS+ASLVM+V IN +DE KLWGLVVC
Sbjct: 241 MQPLCLVGSTLRAPHGCHAQYMSNMGSVASLVMAVIINGNDDEAGGSGRNSMKLWGLVVC 300
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HHTSPR VPFPLRYACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+G
Sbjct: 301 HHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIG 360
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+P++MDLVKCDGAALYY G W+LGVTP E QIKDIA+WLLE+H STGLSTDSL
Sbjct: 361 IVTQSPSIMDLVKCDGAALYYGGMCWMLGVTPAEAQIKDIADWLLEHHGDSTGLSTDSLA 420
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
+AGYPGA LGDAVCG+A+ +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPR
Sbjct: 421 DAGYPGAATLGDAVCGMASARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPR 480
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAFLEVVK+RSLPW++VE+DAIHSLQLILRGS +D +K +V+ D R++ I
Sbjct: 481 SSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFRDIDDSGTKTMVHARLNDLRLQGI 540
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + +EMVRLIETA PILAVD +G VNGWN+K AELTGL V +A+G +LV DLV
Sbjct: 541 DELSSVASEMVRLIETATAPILAVDPNGLVNGWNAKVAELTGLPVGEAMGMSLVQDLVFE 600
Query: 663 DSVDVVKNMLSSAF 676
+SV+ V+ ML A
Sbjct: 601 ESVERVEKMLYDAL 614
>gi|406685519|gb|AFS51200.1| phytochrome P, partial [Lagarostrobos franklinii]
Length = 643
Score = 889 bits (2297), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/614 (68%), Positives = 504/614 (82%), Gaps = 3/614 (0%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-QQDALTLGI 124
AYL R+QRG IQPF CM+AV+E NF ++ YS+NA EMLD+ P +VPN++ + LT+G
Sbjct: 1 AYLSRMQRGGTIQPFSCMLAVEETNFKIIAYSQNALEMLDIMPQSVPNMDLGKSVLTIGT 60
Query: 125 DVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNP 184
DVRTLFT + A AL+KAA E++L+NPI +H + +GKPFYAI+HRIDVG+VIDLEPV
Sbjct: 61 DVRTLFTPASARALEKAAMAQEISLMNPIWVHSQYTGKPFYAIVHRIDVGMVIDLEPVRT 120
Query: 185 DDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHED 244
D ++AAGA++S KLA +AISRLQSLP+G+I LLCD +V +V +LTGYDRVMVYKFHED
Sbjct: 121 GDAAMSAAGAVQSQKLAVRAISRLQSLPAGDIGLLCDSVVEDVRELTGYDRVMVYKFHED 180
Query: 245 EHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLD 304
EHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ ++L
Sbjct: 181 EHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVQVIQSEELR 240
Query: 305 QPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDE-LDNDQEQGRKLWGLVVC 363
QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ++E KLWGLVVC
Sbjct: 241 QPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGAGTSGRSSMKLWGLVVC 300
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HHTSPR VPFPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LCDMLLRD+P+G
Sbjct: 301 HHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRDAPIG 360
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+P++MDLVKCDGAALYY G W LGVTP E QIKDIA+WLLEYH STGLSTDSL
Sbjct: 361 IVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPAEAQIKDIADWLLEYHGDSTGLSTDSLA 420
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
+AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPR
Sbjct: 421 DAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPR 480
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD ++K +V+ D +++ I
Sbjct: 481 SSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSNTKTMVHARLNDLKLQGI 540
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + +EMVRLIETA PILA+D++G VNGWN+K AELTGL V +A+G +LV DL+
Sbjct: 541 DELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMGKSLVHDLILE 600
Query: 663 DSVDVVKNMLSSAF 676
+S + V+ ML A
Sbjct: 601 ESAESVEKMLYKAL 614
>gi|406685665|gb|AFS51273.1| phytochrome P, partial [Tsuga heterophylla]
Length = 656
Score = 889 bits (2297), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/614 (68%), Positives = 506/614 (82%), Gaps = 3/614 (0%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQ--DALTLG 123
AYL R+QRG IQPFGC++AV+E F ++ YSENA EMLDLAP +VP++EQ +ALT+G
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAVEMLDLAPQSVPSMEQPQPEALTIG 60
Query: 124 IDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVN 183
DVRTLFT++ A +L+KAA E++L+NPI +HCK S KPFYAI+HRIDVG+VID EP+
Sbjct: 61 TDVRTLFTAASAHSLEKAAMAQEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDFEPLR 120
Query: 184 PDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHE 243
D ++AAGA++S KLA +AISRLQSLP G+I LLCD +V V +L GYDRVMVYKFHE
Sbjct: 121 TGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDIGLLCDTVVENVRELAGYDRVMVYKFHE 180
Query: 244 DEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKL 303
DEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC+A PVKVIQ ++L
Sbjct: 181 DEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQSEEL 240
Query: 304 DQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVC 363
QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN +DE KLWGLVVC
Sbjct: 241 MQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIINGNDDEAGGSGRNSMKLWGLVVC 300
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HHTSPR VPFPLRYACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+G
Sbjct: 301 HHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIG 360
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+P++MDLVKCDGAALYY G W+LGV PTE QIKDIA+WLLE+H STGLSTDSL
Sbjct: 361 IVTQSPSIMDLVKCDGAALYYGGMCWMLGVAPTEAQIKDIADWLLEHHGDSTGLSTDSLA 420
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
+AGYPGA +LGDAVCG+A+ +ITSK+FLFWFRSHTAKE+KWGGAKH KD GR+MHPR
Sbjct: 421 DAGYPGAASLGDAVCGMASARITSKNFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPR 480
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAFLEVVK+ SLPW++VE+DAIHSLQLILRGS QD +K +V+ D R++ I
Sbjct: 481 SSFKAFLEVVKRGSLPWDNVEIDAIHSLQLILRGSFQDIDDSGTKTMVHARLNDLRLQGI 540
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+G +LV DLV
Sbjct: 541 DELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGMSLVQDLVFE 600
Query: 663 DSVDVVKNMLSSAF 676
+SV+ V+ ML +A
Sbjct: 601 ESVERVEKMLYNAL 614
>gi|406685663|gb|AFS51272.1| phytochrome P, partial [Tsuga diversifolia]
Length = 656
Score = 889 bits (2296), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/614 (69%), Positives = 505/614 (82%), Gaps = 3/614 (0%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQ--DALTLG 123
AYL R+QRG IQPFGC++AV+E F ++ YSENA EMLDLAP +VP++EQ +ALT+G
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAVEMLDLAPQSVPSMEQPQPEALTIG 60
Query: 124 IDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVN 183
DVRTLFT+ A +L+KAA E++L+NPI +HCK S KPFYAI+HRIDVG+VID EP+
Sbjct: 61 TDVRTLFTAPSAHSLEKAAVAQEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDFEPLR 120
Query: 184 PDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHE 243
D ++AAGA++S KLA +AISRLQSLP G+I LLCD +V V +LTGYDRVMVYKFHE
Sbjct: 121 TGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDIGLLCDTVVENVRELTGYDRVMVYKFHE 180
Query: 244 DEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKL 303
DEHG VVAE RR DLEPYLG HYPATDIPQA RFL M+N+VRMICDC+A PVKVIQ ++L
Sbjct: 181 DEHGVVVAEIRRSDLEPYLGLHYPATDIPQAFRFLFMQNRVRMICDCMATPVKVIQSEEL 240
Query: 304 DQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVC 363
QPL L GSTLRAPHGCHA+YM NMGS+ASLVM+V IN +DE KLWGLVVC
Sbjct: 241 MQPLCLVGSTLRAPHGCHAQYMANMGSVASLVMAVIINGNDDEAGGSGRNSMKLWGLVVC 300
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HHTSPR VPFPLRYACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+G
Sbjct: 301 HHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIG 360
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+P++MDLVKCDGAALYY G W+LGVTPTE QIKDIA+WLLE+H STGLSTDSL
Sbjct: 361 IVTQSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTDSLA 420
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
+AGYPGA +LGDAVCG+A+ ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPR
Sbjct: 421 DAGYPGAASLGDAVCGMASAIITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPR 480
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAFLEVVK+RSLPW++VE+DAIHSLQLILRGS QD +K +V+ D R++ I
Sbjct: 481 SSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDINDSGTKTMVHARLNDMRLQGI 540
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+G +LV DLV
Sbjct: 541 DELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGMSLVQDLVFE 600
Query: 663 DSVDVVKNMLSSAF 676
+SV+ V+ ML +A
Sbjct: 601 ESVERVEKMLYNAL 614
>gi|449516898|ref|XP_004165483.1| PREDICTED: phytochrome B-like [Cucumis sativus]
Length = 1132
Score = 888 bits (2295), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/677 (63%), Positives = 524/677 (77%), Gaps = 9/677 (1%)
Query: 6 TNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVP 60
++ TN S S R+ ++ AQ ++DA+L F++S FDYS S I +ST +VP
Sbjct: 17 SSNTNTSNLRSHRTDSISKAIAQYTVDARLHAVFEQSGESGKSFDYSQS--IKTSTQSVP 74
Query: 61 SSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDAL 120
++AYL ++QRG IQPFGCMIA++E +F V+ YSENA E+L L P +VP++E+ + L
Sbjct: 75 EQQITAYLSKIQRGGHIQPFGCMIAIEEASFRVIAYSENARELLGLTPQSVPSLEKPEIL 134
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVR LFTS+ A L+KA E+ LLNP+ IH K SGKPFYAILHRIDVG+VIDLE
Sbjct: 135 TIGTDVRNLFTSNSAILLEKAFGAREITLLNPVWIHSKNSGKPFYAILHRIDVGIVIDLE 194
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P +D ++ AGA++S KLA +AIS+LQ+LP G+I LLCD +V V +LTGYDRVMVYK
Sbjct: 195 PARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVVESVRELTGYDRVMVYK 254
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE +RPDLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV+VIQD
Sbjct: 255 FHEDEHGEVVAESKRPDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHASPVRVIQD 314
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGL 360
L Q L L GSTLRAPHGCHA+YM NMGSIASL M+V IN +DE + R LWGL
Sbjct: 315 AGLMQHLCLVGSTLRAPHGCHAQYMANMGSIASLAMAVVINGNDDEAIGGRNSTR-LWGL 373
Query: 361 VVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDS 420
VVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDMLLRDS
Sbjct: 374 VVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDS 433
Query: 421 PVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTD 480
P GIVTQ+P++MDLVKCDGAALYY+GK + LGVTPTE QIKDI EWLL +H STGLSTD
Sbjct: 434 PAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTEAQIKDIVEWLLAFHGDSTGLSTD 493
Query: 481 SLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKM 540
SL +AGYPGA LGDAVCG+A IT KDFLFWFRSHTAKEIKWGGAKH KD G++M
Sbjct: 494 SLADAGYPGAALLGDAVCGMAVAYITKKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRM 553
Query: 541 HPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRI 600
HPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +++VA +SK +V+ D +
Sbjct: 554 HPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFKNDVAINSKAVVHPHLGDLDL 613
Query: 601 EKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DL 659
+ IDEL + EMVRLIETA PI AVDA G +NGWN+K AELTGL V++A+G +LV DL
Sbjct: 614 QGIDELSSVAREMVRLIETATAPIFAVDADGRINGWNAKIAELTGLAVEEAMGKSLVRDL 673
Query: 660 VAGDSVDVVKNMLSSAF 676
V +S + V ++S A
Sbjct: 674 VYKESEETVDRLVSRAL 690
>gi|449432920|ref|XP_004134246.1| PREDICTED: phytochrome B-like [Cucumis sativus]
Length = 1132
Score = 888 bits (2295), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/677 (63%), Positives = 524/677 (77%), Gaps = 9/677 (1%)
Query: 6 TNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVP 60
++ TN S S R+ ++ AQ ++DA+L F++S FDYS S I +ST +VP
Sbjct: 17 SSNTNTSNLRSHRTDSISKAIAQYTVDARLHAVFEQSGESGKSFDYSQS--IKTSTQSVP 74
Query: 61 SSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDAL 120
++AYL ++QRG IQPFGCMIA++E +F V+ YSENA E+L L P +VP++E+ + L
Sbjct: 75 EQQITAYLSKIQRGGHIQPFGCMIAIEEASFRVIAYSENARELLGLTPQSVPSLEKPEIL 134
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVR LFTS+ A L+KA E+ LLNP+ IH K SGKPFYAILHRIDVG+VIDLE
Sbjct: 135 TIGTDVRNLFTSNSAILLEKAFGAREITLLNPVWIHSKNSGKPFYAILHRIDVGIVIDLE 194
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P +D ++ AGA++S KLA +AIS+LQ+LP G+I LLCD +V V +LTGYDRVMVYK
Sbjct: 195 PARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVVESVRELTGYDRVMVYK 254
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE +RPDLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV+VIQD
Sbjct: 255 FHEDEHGEVVAESKRPDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHASPVRVIQD 314
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGL 360
L Q L L GSTLRAPHGCHA+YM NMGSIASL M+V IN +DE + R LWGL
Sbjct: 315 AGLMQHLCLVGSTLRAPHGCHAQYMANMGSIASLAMAVVINGNDDEAIGGRNSTR-LWGL 373
Query: 361 VVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDS 420
VVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDMLLRDS
Sbjct: 374 VVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDS 433
Query: 421 PVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTD 480
P GIVTQ+P++MDLVKCDGAALYY+GK + LGVTPTE QIKDI EWLL +H STGLSTD
Sbjct: 434 PAGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTEAQIKDIVEWLLAFHGDSTGLSTD 493
Query: 481 SLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKM 540
SL +AGYPGA LGDAVCG+A IT KDFLFWFRSHTAKEIKWGGAKH KD G++M
Sbjct: 494 SLADAGYPGAALLGDAVCGMAVAYITKKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRM 553
Query: 541 HPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRI 600
HPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +++VA +SK +V+ D +
Sbjct: 554 HPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFKNDVAINSKAVVHPHLGDLDL 613
Query: 601 EKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DL 659
+ IDEL + EMVRLIETA PI AVDA G +NGWN+K AELTGL V++A+G +LV DL
Sbjct: 614 QGIDELSSVAREMVRLIETATAPIFAVDADGRINGWNAKIAELTGLAVEEAMGKSLVRDL 673
Query: 660 VAGDSVDVVKNMLSSAF 676
V +S + V ++S A
Sbjct: 674 VYKESEETVDRLVSRAL 690
>gi|406685643|gb|AFS51262.1| phytochrome P, partial [Picea breweriana]
Length = 656
Score = 888 bits (2295), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/614 (69%), Positives = 504/614 (82%), Gaps = 3/614 (0%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQ--DALTLG 123
AYL R+QRG IQPFGC++AV+E F ++ YSENA EMLDLAP +VP++EQ + LT+G
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAVEMLDLAPQSVPSMEQPQLEVLTIG 60
Query: 124 IDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVN 183
DVRTLFT++ A +L+KAA E++L+NPI +HCK S KPFYAI+HRIDVG+VID EP+
Sbjct: 61 TDVRTLFTAASAHSLEKAAVAQEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDFEPLK 120
Query: 184 PDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHE 243
D V+AAGA++S KLA +AISRLQSLP G+I LLCD +V V +LTGYDRVMVYKFHE
Sbjct: 121 TGDAFVSAAGAVQSQKLAVRAISRLQSLPCGDIELLCDTVVENVRELTGYDRVMVYKFHE 180
Query: 244 DEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKL 303
DEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC+A PV+VIQ ++L
Sbjct: 181 DEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVQVIQSEEL 240
Query: 304 DQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVC 363
QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN +DE KLWGLVVC
Sbjct: 241 MQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIINGNDDEGAGSGRNSMKLWGLVVC 300
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HHTSPR VPFPLRYACEF++Q FG+Q+N E++L+AQL EKHILRTQT+LCDMLLRD+P+G
Sbjct: 301 HHTSPRAVPFPLRYACEFMMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRDAPIG 360
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+P++MDLVKCDGAALYY G W+LGVTPTE QIKDIA+WLLE+H STGLSTDSL
Sbjct: 361 IVTQSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTDSLA 420
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
+AGYPGA LGDAVCG+A+ ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPR
Sbjct: 421 DAGYPGAAFLGDAVCGMASATITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPR 480
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAFLEVVK+RSLPW++VE+DAIHSLQLILRGS QD +K +V+ R++ I
Sbjct: 481 SSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDIDDSGTKTMVHSRLNILRLQGI 540
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + +EMVRLIETA PILAVD +G VNGWN+K AELTGL V +A+G +LV DLV
Sbjct: 541 DELSSVASEMVRLIETATAPILAVDYNGLVNGWNAKVAELTGLPVGEAMGMSLVQDLVFE 600
Query: 663 DSVDVVKNMLSSAF 676
+SV+ V+ ML +A
Sbjct: 601 ESVERVEKMLCNAL 614
>gi|406685667|gb|AFS51274.1| phytochrome P, partial [Tsuga sieboldii]
Length = 656
Score = 888 bits (2294), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/614 (68%), Positives = 507/614 (82%), Gaps = 3/614 (0%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQ--DALTLG 123
AYL R+QRG IQPFGC++AV+E F ++ YSENA EMLDLAP +VP++EQ +ALT+G
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAVEMLDLAPQSVPSMEQPQPEALTIG 60
Query: 124 IDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVN 183
DVRTLFT++ A +L++AA E++L+NPI +HCK S KPFYAI+HRIDVG+VID+EP+
Sbjct: 61 TDVRTLFTAASAHSLERAAVAQEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDIEPLR 120
Query: 184 PDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHE 243
D ++AAGA++S KLA +AISRLQSLP G+I LLCD +V V +LTGYDRVMVYKFHE
Sbjct: 121 TGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDIGLLCDTVVENVRELTGYDRVMVYKFHE 180
Query: 244 DEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKL 303
DEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC+A PVKVIQ ++L
Sbjct: 181 DEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQSEEL 240
Query: 304 DQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVC 363
QPL L GSTLRAPHGCHA+YM NMGS+ASLVM+V IN +DE KLWGLVVC
Sbjct: 241 MQPLCLVGSTLRAPHGCHAQYMANMGSVASLVMAVIINGNDDEAGGSGRNSMKLWGLVVC 300
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HHTSPR VPFPLRYA EFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+G
Sbjct: 301 HHTSPRAVPFPLRYAREFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIG 360
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+P++MDLVKCDGAALYY G W+LGVTPTE QIKDIA+WLLE+H STGLSTDSL
Sbjct: 361 IVTQSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTDSLA 420
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
+AGYPGA +LGDAVCG+A+ ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPR
Sbjct: 421 DAGYPGAASLGDAVCGMASAIITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPR 480
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAFLEVVK+RSLPW++VE+DAIHSLQLILRGS QD +K +V+ D R++ I
Sbjct: 481 SSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDINDSGTKTMVHARLNDLRLQGI 540
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + +EMVRLIETA PI AVD++G VNGWN+K AELTGL V +A+G +LV DLV
Sbjct: 541 DELSSVASEMVRLIETATAPIXAVDSNGLVNGWNAKVAELTGLPVGEAMGMSLVQDLVFE 600
Query: 663 DSVDVVKNMLSSAF 676
+SV+ V+ ML +A
Sbjct: 601 ESVERVEKMLYNAL 614
>gi|406685637|gb|AFS51259.1| phytochrome P, partial [Larix gmelinii]
Length = 655
Score = 886 bits (2290), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/614 (68%), Positives = 506/614 (82%), Gaps = 3/614 (0%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQ--DALTLG 123
AYL R+QRG IQPFGC++AV+E F ++ YSENA EMLDLAP +VP++EQ + LT+G
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAVEMLDLAPQSVPSMEQPQPEFLTIG 60
Query: 124 IDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVN 183
DVRTLFT++ A +L+K A E++L+NPI +HCK S KPFYAI+HRIDVG+VID EP+
Sbjct: 61 TDVRTLFTAASAHSLEKVAVAQEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDFEPLK 120
Query: 184 PDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHE 243
D ++AAGA++S KLA +AISRLQSLP G+I LLCD +V V +LTGY+RVMVYKFHE
Sbjct: 121 TGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDIGLLCDTVVENVRELTGYERVMVYKFHE 180
Query: 244 DEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKL 303
DEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC+A PVKVIQ ++L
Sbjct: 181 DEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQSEEL 240
Query: 304 DQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVC 363
QPL L GSTLRAPHGCHA+YM NMGS+ASLVM+V IN +DE KLWGLVVC
Sbjct: 241 MQPLCLVGSTLRAPHGCHAQYMANMGSVASLVMAVIINGNDDEGGGSGRNSMKLWGLVVC 300
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HHTSPR VPF LRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LCDMLLRD+P+G
Sbjct: 301 HHTSPRAVPFSLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRDAPMG 360
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+P++MDLVKCDGAALYY G W+LGVTPTE QIKDIA+WLLE+H STGLSTDSL
Sbjct: 361 IVTQSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTDSLA 420
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
+AGYPGA +LGDAVCG+A+ +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPR
Sbjct: 421 DAGYPGAASLGDAVCGMASARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPR 480
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAFLEVVK+RSLPW++VE+DAIHSLQLILRGS QD +K +V+ D R++ +
Sbjct: 481 SSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDIDDSGTKTMVHSRLNDLRLQGM 540
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+G +LV DLV
Sbjct: 541 DELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLVQDLVFE 600
Query: 663 DSVDVVKNMLSSAF 676
+SV+ V+ ML +A
Sbjct: 601 ESVERVEKMLYNAL 614
>gi|406685655|gb|AFS51268.1| phytochrome P, partial [Pseudotsuga menziesii]
Length = 656
Score = 886 bits (2289), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/614 (68%), Positives = 505/614 (82%), Gaps = 3/614 (0%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQ--DALTLG 123
AYL R+QRG IQPFGC++AV+E F ++ YSENA EMLDLAP +VP++EQ + LT+G
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAVEMLDLAPQSVPSMEQPQPEVLTIG 60
Query: 124 IDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVN 183
DVRTLFT++ A +L+KAA E++L+NPI +HCK S KPFYAI+HRIDVG+VID EP+
Sbjct: 61 TDVRTLFTAASANSLEKAAVAQEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDFEPLK 120
Query: 184 PDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHE 243
D ++AAGA++S KLA +AISRLQSLP G+I LLCD +V V +LTGYDRVMVYKFHE
Sbjct: 121 TGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDIGLLCDTVVENVRELTGYDRVMVYKFHE 180
Query: 244 DEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKL 303
DEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC+A PVK+IQ ++L
Sbjct: 181 DEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKLIQSEEL 240
Query: 304 DQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVC 363
QPL L GSTLRAPHGCHA+YM NMGS+ASLVM+V IN +DE KLWGLVVC
Sbjct: 241 MQPLCLVGSTLRAPHGCHAQYMANMGSVASLVMAVIINGNDDEGGGSGRNSMKLWGLVVC 300
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HHTSPR VPFPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LCDMLLRD+P+G
Sbjct: 301 HHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRDAPIG 360
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+P++MDLVKCDGAALYY G W+LGVTPTE QIKDIA+WLLE+H STGLSTDSL
Sbjct: 361 IVTQSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTDSLA 420
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
+AGYPGA +LGDAVCG+A+ ITSK+FLFWFRSHTAKE+KWGGAKH KD GR+MHPR
Sbjct: 421 DAGYPGAASLGDAVCGMASAIITSKEFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPR 480
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAFLEVVK+RS PW++VE+DAIHSLQLILRGS QD +K +V+ D R++ +
Sbjct: 481 SSFKAFLEVVKRRSFPWDNVEIDAIHSLQLILRGSFQDIDDSGTKTMVHSRLNDLRLQGM 540
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+ +LV DLV
Sbjct: 541 DELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMSMSLVQDLVFE 600
Query: 663 DSVDVVKNMLSSAF 676
+SV V+ ML++A
Sbjct: 601 ESVQRVEKMLNNAL 614
>gi|406685515|gb|AFS51198.1| phytochrome P, partial [Dacrydium elatum]
Length = 660
Score = 885 bits (2288), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/624 (68%), Positives = 505/624 (80%), Gaps = 19/624 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG IQPFGCM+AV+E NF ++ +S+NA EMLDL P +VP++E + L
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETNFKIIAFSQNALEMLDLMPQSVPSMELGKLGGGEVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLFT SGA AL+KAA +++L+NPI +H + SGKPF AI+HRIDVG+VIDLE
Sbjct: 61 TIGTDVRTLFTPSGARALEKAAMAPDISLMNPIWVHSQYSGKPFNAIVHRIDVGMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P+ D ++ AGA++S KLA +AISRLQSLPSG+I LLCD +V +V +LTGYDRV+VYK
Sbjct: 121 PLRTGDAAMSTAGAVQSQKLAVRAISRLQSLPSGDIGLLCDTVVEDVRELTGYDRVVVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTSPR V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLAEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GI+TQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIMTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+G
Sbjct: 535 RLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAF 676
+LV DLV +S + V+ ML A
Sbjct: 595 KSLVHDLVLEESAECVEKMLYRAL 618
>gi|37779204|gb|AAO86644.1| PHYA3 photoreceptor [Stellaria longipes]
Length = 1123
Score = 885 bits (2288), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/675 (63%), Positives = 526/675 (77%), Gaps = 10/675 (1%)
Query: 12 SRSSSARSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSN-VPSS--TVSA 66
S ++S RSK +AR+ AQT DAKL +F+ES +FDYS+SV S+S N +P S S+
Sbjct: 9 SSTNSGRSKHSARIIAQTIQDAKLHAEFEESSNEFDYSSSVRGSTSGVNQLPQSDKVTSS 68
Query: 67 YLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDV 126
YL ++Q+G+ IQPFGC++A+D++ F V+ +SENAPEML + HAVP++ + +G D+
Sbjct: 69 YLLQIQKGKFIQPFGCLLALDDKTFRVIAFSENAPEMLTMVSHAVPSVGDLPVIGIGTDI 128
Query: 127 RTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDD 186
RT+FT A+ALQKA F +V+LLNPIL+HCK SGKPFYAI+HR+ LVID EPV P +
Sbjct: 129 RTIFTDPSASALQKALGFTDVSLLNPILVHCKNSGKPFYAIVHRVTRSLVIDFEPVKPYE 188
Query: 187 VPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEH 246
VP+TAAGAL+SYKLAAKAI+RLQSLPSGN+ L D +V EV +LTGYDRVM YKFH+D+H
Sbjct: 189 VPMTAAGALQSYKLAAKAITRLQSLPSGNMDRLVDTMVQEVFELTGYDRVMAYKFHDDDH 248
Query: 247 GEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQP 306
GEVV+E +P+L+ YLG HYPATDIPQA+RFL MKNKVR+ICDC A V+V+QD+KL
Sbjct: 249 GEVVSEVTKPNLDSYLGLHYPATDIPQAARFLFMKNKVRLICDCRAKNVRVVQDEKLSVD 308
Query: 307 LSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDND---QEQGRK-LWGLVV 362
L+LCGSTLRAPHGCHA+YMENM SI SLVM+V +N+ +DE Q RK LWGLVV
Sbjct: 309 LTLCGSTLRAPHGCHAQYMENMNSIGSLVMAVVVNDEDDEDGGSAPAQPHKRKRLWGLVV 368
Query: 363 CHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPV 422
CHHTSPRFVPFPLRYACEFL QVF + VNKE+EL +Q EK ILRTQT+LCDML+RD+P+
Sbjct: 369 CHHTSPRFVPFPLRYACEFLAQVFAIHVNKELELESQFLEKKILRTQTLLCDMLMRDAPL 428
Query: 423 GIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSL 482
GIVTQ PNVMDLVKCDGAAL Y K+W LG++PT+ Q++DIA WL H STGLSTDSL
Sbjct: 429 GIVTQNPNVMDLVKCDGAALLYNNKIWKLGISPTDYQLRDIAGWLSRDHTDSTGLSTDSL 488
Query: 483 VEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHP 542
+AGYPGA +LGD VCG+AAV+IT + LFWFRSHTA E+KWGGAKH++G KD G KMHP
Sbjct: 489 HDAGYPGARSLGDTVCGMAAVRITLNNMLFWFRSHTAAEVKWGGAKHETGEKDDGSKMHP 548
Query: 543 RSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAED-SKMIVNVPSVDDRIE 601
R+SFKAFLEVVK+RS+PW+D EMDAIHSLQLILR + +D A D + +++ D +I
Sbjct: 549 RTSFKAFLEVVKRRSVPWKDYEMDAIHSLQLILRNAFKDVEASDLNTSVIHSKISDLQIN 608
Query: 602 KIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVA 661
+ EL +T+EMVRLIETA VPILAVDA G VNGWN+K ELTG+ V +A+G + L
Sbjct: 609 GLRELEAVTSEMVRLIETATVPILAVDADGLVNGWNTKIFELTGVPVAEAVGKHIASLAE 668
Query: 662 GDSVDVVKNMLSSAF 676
S+D VK ML A
Sbjct: 669 ESSIDNVKRMLQLAL 683
>gi|406685523|gb|AFS51202.1| phytochrome P, partial [Lepidothamnus laxifolius]
Length = 670
Score = 885 bits (2287), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/624 (68%), Positives = 503/624 (80%), Gaps = 20/624 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDA------ 119
AYL R+QRG IQPFGCM+AV+E NF ++ YSENA EMLD+ P VPN++ +
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETNFKIIAYSENALEMLDIMPQYVPNMDLGKSGGGGAV 60
Query: 120 LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDL 179
LT+G DVRTLFT++GA AL+KA+ E++L+NPI +H + +GKPFYAI+HRIDVG+VIDL
Sbjct: 61 LTIGTDVRTLFTAAGARALEKASMAQEISLMNPIWVHSQYAGKPFYAIVHRIDVGMVIDL 120
Query: 180 EPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVY 239
EP D ++AAGA++S KLA +AISRLQSLP+G+I LLCD +V +V +LTGYDRVMVY
Sbjct: 121 EPAKTGDAAMSAAGAVQSQKLAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVY 180
Query: 240 KFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQ 299
KFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ
Sbjct: 181 KFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQ 240
Query: 300 DKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG----- 354
+ L Q L L GSTLRAPHGCHA+YM NMGSIASL M+V IN ND+E G
Sbjct: 241 SQDLMQLLCLVGSTLRAPHGCHAQYMANMGSIASLAMAVVIN------GNDEEGGGTSGR 294
Query: 355 --RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
KLWGLVVCHHTSPR VPFPLRY CEFL+Q FG+Q+N E++L+AQL EKHILRTQT+L
Sbjct: 295 SSMKLWGLVVCHHTSPRAVPFPLRYGCEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLL 354
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIA+WLLEYH
Sbjct: 355 CDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIADWLLEYHG 414
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AGYPGA +LGDAVCG+AA +ITS DFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 DSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSNDFLFWFRSHTAKEMKWGGAKHHPD 474
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVN 592
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD ++K +V+
Sbjct: 475 DKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIEDSNTKTMVH 534
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +++ IDEL + +EMVRLIETA PILAVD+ G VNGWN+K AELTGL V +A+
Sbjct: 535 ARLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSEGLVNGWNAKVAELTGLPVGEAM 594
Query: 653 GTALV-DLVAGDSVDVVKNMLSSA 675
G +LV DLV +S + V+ ML+ A
Sbjct: 595 GESLVHDLVCEESAECVEKMLNRA 618
>gi|2499557|sp|Q41046.1|PHY_PINSY RecName: Full=Phytochrome
gi|1237084|emb|CAA65510.1| phytochrome [Pinus sylvestris]
Length = 1131
Score = 884 bits (2284), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/663 (64%), Positives = 522/663 (78%), Gaps = 11/663 (1%)
Query: 22 NARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRL 76
A AQ + DA+L + F++S FDY+ S+ + + VP ++AYL R+QRG
Sbjct: 30 KATAMAQYNSDARLLQVFEQSGESGKSFDYTRSIQVHNRA--VPEQQITAYLSRIQRGGR 87
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE--QQDALTLGIDVRTLFTSSG 134
IQPFGC++AV+E F ++ YSEN EMLDL +VP++E QQD LT+G DVRTLFT++
Sbjct: 88 IQPFGCVLAVEETTFRIIAYSENE-EMLDLGAQSVPSMEKPQQDVLTIGTDVRTLFTAAS 146
Query: 135 AAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGA 194
A +L+KAA E++L+NPI +HCK S KPFYAI+HRIDVG+VIDLEP+ D ++AAGA
Sbjct: 147 AHSLEKAAVAQEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDLEPLRTGDAFMSAAGA 206
Query: 195 LKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECR 254
++S KLA +AISRLQSLP G++ LLCD +V V +LTGYDRVMVYKFHEDEHGEVVAE R
Sbjct: 207 VQSQKLAVRAISRLQSLPCGDVGLLCDTVVENVRELTGYDRVMVYKFHEDEHGEVVAEIR 266
Query: 255 RPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTL 314
R DLEPYLG HYPATDIPQASRFL M+N+VRMICDC+A PVKVIQ ++L QPL L GST
Sbjct: 267 RSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQSEELMQPLCLVGSTP 326
Query: 315 RAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFP 374
APHGCHA+YM NMGSI SL+M+V IN +DE KLWGLVVCHHTSPR VPFP
Sbjct: 327 SAPHGCHAQYMANMGSIRSLLMAVIINGNDDEGGGSGRNSMKLWGLVVCHHTSPRAVPFP 386
Query: 375 LRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDL 434
LRYACEFL+Q G+Q+N E++L+AQL EKHILRTQT+LCDMLLRD+P+GIVTQ+P++ DL
Sbjct: 387 LRYACEFLMQALGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRDAPMGIVTQSPSIKDL 446
Query: 435 VKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALG 494
VKCDGAALYY G W+LGVTPTE QIKDIA+WLLE+H STGLSTDSL +AGYPGA +LG
Sbjct: 447 VKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTDSLADAGYPGAASLG 506
Query: 495 DAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVK 554
DAVCG+A+ +ITSKDFLFWFRSHTAKE+KWGGAKH KD R+MHPRSSFKAFLEVVK
Sbjct: 507 DAVCGMASARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDARRMHPRSSFKAFLEVVK 566
Query: 555 QRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMV 614
+RSLPW++VE+DAIHSLQLILR S +D +K +V+ R++ IDEL + +EMV
Sbjct: 567 RRSLPWDNVEIDAIHSLQLILRCSFRDIDDSGTKTMVHSRLNYLRLQGIDELSSVASEMV 626
Query: 615 RLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLS 673
RLIETA PILAVD +G VNGWN+K AELTGL V +A+G +LV DLV SV+ V+ ML
Sbjct: 627 RLIETATAPILAVDYNGLVNGWNAKVAELTGLPVGEAMGMSLVQDLVFEQSVERVEKMLH 686
Query: 674 SAF 676
+A
Sbjct: 687 NAL 689
>gi|406685615|gb|AFS51248.1| phytochrome P, partial [Prumnopitys ladei]
Length = 662
Score = 884 bits (2283), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/621 (68%), Positives = 505/621 (81%), Gaps = 12/621 (1%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD------A 119
AYL R+QRG IQPFGCM+AV+E F ++ YS+NA EMLDL P +VPN++
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEEMGFKIIAYSQNALEMLDLMPQSVPNMDLGKPGGGGAV 60
Query: 120 LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDL 179
LT G DVRTLFT + A AL+KAA E++L+NPI +H + +GKPFYAI+HRIDVG+VIDL
Sbjct: 61 LTTGTDVRTLFTPASARALEKAAMAREISLMNPIWVHSQYTGKPFYAIVHRIDVGIVIDL 120
Query: 180 EPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVY 239
EPV D ++AAGA++S KL+ +AISRLQSLP+G+I LLCD +V +V +LTGYDRVMVY
Sbjct: 121 EPVRMGDATMSAAGAVQSQKLSVRAISRLQSLPAGDIGLLCDTVVEDVRELTGYDRVMVY 180
Query: 240 KFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQ 299
KFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKV+Q
Sbjct: 181 KFHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVVQ 240
Query: 300 DKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR---K 356
++L QP+ L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ++E GR K
Sbjct: 241 SEELRQPICLVGSTLRAPHGCHAQYMANMGSIASLVMAVIINGDDEE--GGGTSGRVSMK 298
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTSPR VPFPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LCDML
Sbjct: 299 LWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDML 358
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIA+WLLEYH STG
Sbjct: 359 LRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIADWLLEYHGDSTG 418
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 419 LSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDD 478
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD ++K +V+
Sbjct: 479 GRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSNTKTMVHARLN 538
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D +++ IDEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+G +L
Sbjct: 539 DIKLQGIDELTSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSL 598
Query: 657 V-DLVAGDSVDVVKNMLSSAF 676
V DLV +S + V+ ML A
Sbjct: 599 VHDLVFEESAESVEKMLYRAL 619
>gi|37779206|gb|AAO86645.1| PHYA4 photoreceptor [Stellaria longipes]
Length = 1122
Score = 884 bits (2283), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/675 (63%), Positives = 525/675 (77%), Gaps = 10/675 (1%)
Query: 12 SRSSSARSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSN-VPSS--TVSA 66
S ++S RSK +AR+ AQT DAKL +F+ES +FDYS+SV S+S N +P S S+
Sbjct: 9 SSTNSGRSKHSARIIAQTIQDAKLHAEFEESSNEFDYSSSVRGSTSGVNQLPKSDKVTSS 68
Query: 67 YLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDV 126
YL ++Q+G+ IQ FGC++A+D++ F V+ +SENAPEML + HAVP++ + +G ++
Sbjct: 69 YLLQIQKGKFIQLFGCLLALDDKTFRVIAFSENAPEMLTMVSHAVPSVGDLPVIGIGTNI 128
Query: 127 RTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDD 186
RT+FT A+ALQKA F +V+LLNPIL+HCK SGKPFYAI+HR+ LVID EPV P +
Sbjct: 129 RTIFTGPSASALQKALGFTDVSLLNPILVHCKNSGKPFYAIVHRVTRSLVIDFEPVKPYE 188
Query: 187 VPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEH 246
VP+TAAGAL+SYKLAAKAI+RLQSLPSGN+ L D +V EV +LTGYDRVM YKFH+D+H
Sbjct: 189 VPMTAAGALQSYKLAAKAITRLQSLPSGNMDRLVDTMVQEVFELTGYDRVMAYKFHDDDH 248
Query: 247 GEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQP 306
GEVV+E +P+L+ YLG HYPATDIPQA+RFL MKNKVR+ICDC A V+V+QD+KL
Sbjct: 249 GEVVSEVTKPNLDSYLGLHYPATDIPQAARFLFMKNKVRLICDCRAKNVRVVQDEKLSVD 308
Query: 307 LSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDND---QEQGRK-LWGLVV 362
L+LCGSTLRAPHGCHA+YMENM SI SLVM+V +N+ +DE Q RK LWGLVV
Sbjct: 309 LTLCGSTLRAPHGCHAQYMENMNSIGSLVMAVVVNDEDDEDGGSAPAQPHKRKRLWGLVV 368
Query: 363 CHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPV 422
CHHTSPRFVPFPLRYACEFL QVF + VNKE+EL Q EK ILRTQT+LCDML+RD+P+
Sbjct: 369 CHHTSPRFVPFPLRYACEFLAQVFAIHVNKELELENQFLEKKILRTQTLLCDMLMRDAPL 428
Query: 423 GIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSL 482
GIVTQ PNVMDLVKCDGAAL Y K+W LG+TPT+ Q++DIA WL H STGLSTDSL
Sbjct: 429 GIVTQNPNVMDLVKCDGAALLYNNKIWKLGITPTDYQLRDIAGWLSRDHTDSTGLSTDSL 488
Query: 483 VEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHP 542
+AGYPGA +LGD VCG+AAV+IT D LFWFRSHTA E+KWGGAKH++G KD G KMHP
Sbjct: 489 HDAGYPGARSLGDTVCGMAAVRITPNDMLFWFRSHTAAEVKWGGAKHETGEKDDGSKMHP 548
Query: 543 RSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAED-SKMIVNVPSVDDRIE 601
R+SFKAFLEVVK+RS+PW+D EMDAIHSLQLILR + +D A D + +++ D +I
Sbjct: 549 RTSFKAFLEVVKRRSVPWKDYEMDAIHSLQLILRNAFKDVEASDLNTSVIHSKISDLQIN 608
Query: 602 KIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVA 661
+ EL +T+EMVRLIETA VPILAVDA G VNGWN+K +ELTG+ V +A+G + L
Sbjct: 609 GLRELEAVTSEMVRLIETATVPILAVDADGLVNGWNTKISELTGVPVAEAVGKHIASLAE 668
Query: 662 GDSVDVVKNMLSSAF 676
S+D VK ML A
Sbjct: 669 ESSIDNVKRMLQLAL 683
>gi|406685489|gb|AFS51185.1| phytochrome P, partial [Acmopyle sahniana]
Length = 659
Score = 884 bits (2283), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/623 (68%), Positives = 502/623 (80%), Gaps = 18/623 (2%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE----QQDALT 121
AYL R+QRG IQPFGCM+AV+E NF ++ YS+NA EMLDL P +VP +E LT
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGSVLT 60
Query: 122 LGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEP 181
+G DVRTLFT SGA AL+KAA +++L+NPI +H + +GKPF AI+HRIDVG+VIDLEP
Sbjct: 61 IGTDVRTLFTPSGARALEKAAMAPDISLMNPIWVHSQYTGKPFNAIVHRIDVGIVIDLEP 120
Query: 182 VNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKF 241
+ D ++ AGA++S KLA +AISRLQSLP+G+I LLCD +V +V +LTGYDRVMVYKF
Sbjct: 121 LRTGDAAMSTAGAVQSQKLAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYKF 180
Query: 242 HEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDK 301
HEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +
Sbjct: 181 HEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQSE 240
Query: 302 KLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------- 354
+L QP L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 ELRQPFCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGPSGRSS 294
Query: 355 RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCD 414
KLWGLVVCHHTSPR V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LCD
Sbjct: 295 MKLWGLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCD 354
Query: 415 MLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGS 474
MLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIAEWLLEYH S
Sbjct: 355 MLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDS 414
Query: 475 TGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGK 534
TGLSTDSL +AGYPGA LGDAVCG+AA +ITSKD+LFW+RSHTAKE+KWGGAKH K
Sbjct: 415 TGLSTDSLADAGYPGAALLGDAVCGMAAARITSKDYLFWYRSHTAKEMKWGGAKHHPDDK 474
Query: 535 DGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVP 594
D GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD D+K +V+
Sbjct: 475 DDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSDTKTMVHAR 534
Query: 595 SVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGT 654
D +++ IDEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+G
Sbjct: 535 LNDLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGK 594
Query: 655 ALV-DLVAGDSVDVVKNMLSSAF 676
+LV DLV +S + V+ ML A
Sbjct: 595 SLVHDLVLEESAECVEKMLYRAL 617
>gi|740579|prf||2005378A phytochrome
Length = 1117
Score = 883 bits (2282), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/658 (64%), Positives = 515/658 (78%), Gaps = 9/658 (1%)
Query: 24 RVAAQTSIDAKLAEDFDESD----FDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLIQP 79
R AQTS +AKL ++ES FDYS SV S+ + S V+AYLQR+QRG L+Q
Sbjct: 20 RRIAQTSANAKLYAAYEESSESGSFDYSQSV--SAGKEGISSQLVTAYLQRMQRGGLVQQ 77
Query: 80 FGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQ 139
FGC+IAV+E+ F VL E APEMLD+A AVP + Q L +G DVRTL + + A+AL
Sbjct: 78 FGCLIAVEEETFRVLHMCE-APEMLDVATQAVPTMGQYSRLCIGADVRTLLSPASASALD 136
Query: 140 KAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYK 199
+ +V++ NPI + ++SGKPFYAILHR DVGLVIDLEP+ PDD +T GAL+S+K
Sbjct: 137 RVIGVVDVSMFNPITVQSRSSGKPFYAILHRNDVGLVIDLEPIRPDDASITG-GALQSHK 195
Query: 200 LAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLE 259
LAAKAI+RLQSLP G+I LLCD +V EV +LTG+DRVM YKFHEDEHGEVVAE RR DLE
Sbjct: 196 LAAKAIARLQSLPGGDIGLLCDSVVEEVHELTGFDRVMAYKFHEDEHGEVVAEIRRTDLE 255
Query: 260 PYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHG 319
PY+G HYPATDIPQA+RFL MKN+VRMICDC PPVK+IQDK L QP+SL GSTLRAPHG
Sbjct: 256 PYIGLHYPATDIPQAARFLFMKNRVRMICDCRLPPVKLIQDKTLSQPMSLTGSTLRAPHG 315
Query: 320 CHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYAC 379
CH +YM NM SI+SLVM+V +N+++D+ QG KLWGLVVCHHTSPR+VPFP+R AC
Sbjct: 316 CHTQYMANMNSISSLVMAVIVNDSDDDSAGHSSQGIKLWGLVVCHHTSPRYVPFPVRSAC 375
Query: 380 EFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDG 439
EFL+QVF +Q+N EV ++AQ+REKHILRTQT+LCDMLLRD+P+GIV+Q+PN+MDLV CDG
Sbjct: 376 EFLMQVFSLQLNMEVGMAAQVREKHILRTQTLLCDMLLRDAPIGIVSQSPNIMDLVTCDG 435
Query: 440 AALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCG 499
AALYY K WLLG TPTE QI DIA WLL+ H+ STGLSTDSL + GYP A LGDAVCG
Sbjct: 436 AALYYGKKCWLLGTTPTEAQIVDIAAWLLDCHKDSTGLSTDSLAKTGYPEASCLGDAVCG 495
Query: 500 IAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLP 559
+AA KIT+ DFLFWFRSHTAKE++WGGA+HD +D GR+MHPRSSFKAFLEVVKQ+SLP
Sbjct: 496 LAAAKITATDFLFWFRSHTAKEVRWGGARHDPEERDDGRRMHPRSSFKAFLEVVKQQSLP 555
Query: 560 WEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIET 619
WEDVEMDAIHSLQLILRGS QD ++K +++ D +++ +DEL + +EMVRLIET
Sbjct: 556 WEDVEMDAIHSLQLILRGSFQDIDDSNTKTMIHARLNDLKLQGLDELSTVASEMVRLIET 615
Query: 620 AAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
A PILAVD G +NGWN K AELTGL+ + A+G +L +LV +S +V+ +L A
Sbjct: 616 ATAPILAVDGQGLINGWNGKVAELTGLSFETAMGKSLAKELVHEESKTIVERVLHLAL 673
>gi|406685651|gb|AFS51266.1| phytochrome P, partial [Pinus elliottii]
Length = 656
Score = 883 bits (2282), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/614 (68%), Positives = 504/614 (82%), Gaps = 3/614 (0%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ--QDALTLG 123
AYL R+QRG IQPFGC++AV+E F ++ YSENA EMLDLAP +VP++EQ QD LT+G
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAVEMLDLAPQSVPSMEQPQQDVLTIG 60
Query: 124 IDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVN 183
DVRTLFT++ A +L+KAA E++L+NPI +HCK S KPFYAI+HRIDVG+VIDLEP+
Sbjct: 61 TDVRTLFTAASAHSLEKAAVAQEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDLEPLR 120
Query: 184 PDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHE 243
D ++AAGA++S KLA +AISRLQSLP G++ LLCD +V V +LTGYDRVMVYKFHE
Sbjct: 121 TGDAFMSAAGAVQSQKLAVRAISRLQSLPGGDVGLLCDTVVENVRELTGYDRVMVYKFHE 180
Query: 244 DEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKL 303
DEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC+A PVKVIQ ++L
Sbjct: 181 DEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQSEEL 240
Query: 304 DQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVC 363
QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ++E KLWGLVVC
Sbjct: 241 MQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIINGNDEEGGGSGRNSMKLWGLVVC 300
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HHTSPR VPFPLRYACEFL+Q G+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+G
Sbjct: 301 HHTSPRAVPFPLRYACEFLMQALGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPMG 360
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
VTQ+P++ DLVKCDGAALYY G W+ GVTPTE QIKDIA+WLLE+H STGLSTDSL
Sbjct: 361 TVTQSPSIRDLVKCDGAALYYGGMCWMXGVTPTEAQIKDIADWLLEHHGDSTGLSTDSLA 420
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
+AGYPGA +LGDAVCG+A+ +ITSKDF FWFRSHTAKE+KWGGAKH KD R+MHPR
Sbjct: 421 DAGYPGAASLGDAVCGMASARITSKDFPFWFRSHTAKEMKWGGAKHHPDDKDDARRMHPR 480
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAFLEVVK+RSLPW++VE+DAIHSLQLILRGS QD +K +V+ D R++ +
Sbjct: 481 SSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDIDDSGTKTMVHSRLNDLRLQGM 540
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+G +LV DLV
Sbjct: 541 DELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGMSLVQDLVFE 600
Query: 663 DSVDVVKNMLSSAF 676
+SV+ V+ ML +A
Sbjct: 601 ESVERVEKMLHNAL 614
>gi|33333476|gb|AAQ11871.1| phytochrome A1 [Stellaria longipes]
Length = 1122
Score = 883 bits (2281), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/686 (62%), Positives = 530/686 (77%), Gaps = 13/686 (1%)
Query: 1 MSSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSN 58
M+S++ ++ S ++S RSK +AR+ AQT DAK +F+ES +FDYS+SV S+S N
Sbjct: 1 MASRAQSQ---SSTNSGRSKHSARIIAQTIQDAKFHAEFEESSNEFDYSSSVRGSTSGVN 57
Query: 59 -VPSS--TVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE 115
+P S S+YL ++Q+G+ IQPFGC++A+D++ F V+ +SENAPEML + HAVP++
Sbjct: 58 QLPKSDKVTSSYLLQIQKGKFIQPFGCLLALDDKTFRVIAFSENAPEMLTMVSHAVPSVG 117
Query: 116 QQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGL 175
+ +G D+RT+FT A+ALQKA F +V+LLNPIL+HCK SGKPFYAI+HR+ L
Sbjct: 118 DLPVIGIGTDIRTIFTGPSASALQKALGFTDVSLLNPILVHCKNSGKPFYAIVHRVTRSL 177
Query: 176 VIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDR 235
VID EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSGN+ L D +V EV +LTGYDR
Sbjct: 178 VIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGNMVRLVDTMVQEVFELTGYDR 237
Query: 236 VMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPV 295
VM YKFH+D+HGEVV+E +P+L+ YLG HYPATDIPQA+RFL MKNKVR+ICDC A V
Sbjct: 238 VMAYKFHDDDHGEVVSEVTKPNLDSYLGLHYPATDIPQAARFLFMKNKVRLICDCRAKNV 297
Query: 296 KVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDND---QE 352
+V+QD+KL L+LCGSTLRAPHGCHA+YMENM SI SLVM+V +N+ +DE Q
Sbjct: 298 RVVQDEKLSVDLTLCGSTLRAPHGCHAQYMENMNSIGSLVMAVVVNDEDDEDGGSAPAQP 357
Query: 353 QGRK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTV 411
RK LWGLVVCHHTSPRFVPFPLRYACEFL QVF + VNKE+EL Q EK ILRTQT+
Sbjct: 358 HKRKRLWGLVVCHHTSPRFVPFPLRYACEFLAQVFAIHVNKELELENQFLEKKILRTQTL 417
Query: 412 LCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYH 471
LCDML+RD+P+GIVT +PN+MDLVKCDGAAL Y K+W LG TPT+ Q+++I WL H
Sbjct: 418 LCDMLIRDAPLGIVTHSPNIMDLVKCDGAALLYNNKVWRLGSTPTDYQLQEIGGWLSRDH 477
Query: 472 RGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDS 531
STGLSTDSL +AGYP AL LGD+VCG+AAV IT D LFWF SHTA EIKWGGAKH++
Sbjct: 478 MDSTGLSTDSLYDAGYPAALELGDSVCGMAAVSITVNDMLFWFTSHTAAEIKWGGAKHEA 537
Query: 532 GGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMI 590
G KD G KMHPRSSFKAFLEVVK+RS+PW+D EMDAIHSLQLILR + +D E A+ + +
Sbjct: 538 GEKDDGSKMHPRSSFKAFLEVVKRRSVPWKDYEMDAIHSLQLILRNAFKDGEAADLNTSV 597
Query: 591 VNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQ 650
++ D +I + EL +T+EMVRLIETA VPI AVD+ G VNGWN+K ELTG+ V++
Sbjct: 598 IHSKISDLQISGLKELEAVTSEMVRLIETATVPIFAVDSDGLVNGWNTKIYELTGIPVEE 657
Query: 651 AIGTALVDLVAGDSVDVVKNMLSSAF 676
A+G + LV S+D VK ML SA
Sbjct: 658 AVGKHIAALVEDSSIDNVKQMLQSAL 683
>gi|406685541|gb|AFS51211.1| phytochrome P, partial [Phyllocladus hypophyllus]
Length = 661
Score = 882 bits (2280), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/625 (67%), Positives = 503/625 (80%), Gaps = 20/625 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD------A 119
AYL R+QRG IQPFGCM+AV+E NF ++ YS+NA EMLDL P +VPN++
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETNFKIIAYSQNALEMLDLMPQSVPNMDLGKPGGGGAV 60
Query: 120 LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDL 179
LT+G DVR+LFT + A ALQKA+ E++L+NPI +H + +GKPFYAI+HRIDVG+VIDL
Sbjct: 61 LTIGTDVRSLFTVASARALQKASMAQEISLMNPIWVHSQYTGKPFYAIVHRIDVGMVIDL 120
Query: 180 EPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVY 239
EPV D ++AAGA++S +LA +AISRLQSLP+G+I LLCD +V +V +LTGYDRVMVY
Sbjct: 121 EPVRTGDAALSAAGAVQSQRLAVRAISRLQSLPAGDIGLLCDTVVEDVRELTGYDRVMVY 180
Query: 240 KFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQ 299
KFHEDEHGEVVAE RR DLEPY G HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ
Sbjct: 181 KFHEDEHGEVVAEIRRADLEPYQGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQ 240
Query: 300 DKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG----- 354
++L QPL L GSTLRAPHGCHA+YM NMGS+ASLVM+V IN ND+E G
Sbjct: 241 SEELRQPLCLVGSTLRAPHGCHAQYMANMGSVASLVMAVVIN------GNDEEGGGTSGR 294
Query: 355 --RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
KLWGLVVCHHTSPR VPFPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+L
Sbjct: 295 SSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLL 354
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIA+WLLEYH
Sbjct: 355 CDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIADWLLEYHG 414
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AGYPGA +LGDAVCG+AA +ITS DFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 DSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSNDFLFWFRSHTAKEMKWGGAKHHPD 474
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVN 592
KD GR+MHPRSSFKAFLEVVK+RS PWE+VEMDAIHSLQLILRGS QD ++K +V+
Sbjct: 475 DKDDGRRMHPRSSFKAFLEVVKRRSFPWENVEMDAIHSLQLILRGSFQDIEDSNTKTMVH 534
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +++ IDEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+
Sbjct: 535 TRLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLAVGEAM 594
Query: 653 GTALV-DLVAGDSVDVVKNMLSSAF 676
G +LV DLV +S + V +L A
Sbjct: 595 GKSLVHDLVFEESAESVDKILYRAL 619
>gi|406685639|gb|AFS51260.1| phytochrome P, partial [Larix kaempferi]
Length = 655
Score = 882 bits (2280), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/614 (68%), Positives = 505/614 (82%), Gaps = 3/614 (0%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQ--DALTLG 123
AYL R+QRG IQPFGC++AV+E F ++ YSENA EMLDLAP +VP++EQ + LT+G
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAVEMLDLAPQSVPSMEQPQPEFLTIG 60
Query: 124 IDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVN 183
DVRTLFT++ A +L+KAA E++L+NPI +HCK S KPFYAI+HRIDVG+VID EP+
Sbjct: 61 TDVRTLFTAASAHSLEKAAVAQEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDFEPLK 120
Query: 184 PDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHE 243
D ++AAGA++S KLA +AISRLQS P G+I LLCD +V V +LTGY+RVMVYKFHE
Sbjct: 121 TGDAFMSAAGAVQSQKLAVRAISRLQSPPCGDIGLLCDTVVENVRELTGYERVMVYKFHE 180
Query: 244 DEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKL 303
DEHGEVVAE RR DLEPYLG HYPATDIPQASRFL +N+VRMICDC+A PVKVIQ ++L
Sbjct: 181 DEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFTQNRVRMICDCMATPVKVIQSEEL 240
Query: 304 DQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVC 363
QPL L GSTLRAPHGCHA+YM NMGS+ASLVM+V IN +DE KLWGLVVC
Sbjct: 241 MQPLCLVGSTLRAPHGCHAQYMANMGSVASLVMAVIINGNDDEGGGSGRNSMKLWGLVVC 300
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HHTSPR VPFPLRYACEFL+Q FG+Q+N E++L+AQL EKHILR QT+LCDMLLRD+P+G
Sbjct: 301 HHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRIQTLLCDMLLRDAPMG 360
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+P++MDLVKCDGAALYY G W+LGVTPTE QIKDIA+WLLE+H STGLSTDSL
Sbjct: 361 IVTQSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTDSLA 420
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
+AGYPGA +LGDAVCG+A+ +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPR
Sbjct: 421 DAGYPGAASLGDAVCGMASARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPR 480
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAFLEVVK+RSLPW++VE+DAIHSLQLILRGS QD +K +V+ D R++ +
Sbjct: 481 SSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDIDDSGTKTMVHSRLNDLRLQGM 540
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+G +LV DLV
Sbjct: 541 DELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLVQDLVFE 600
Query: 663 DSVDVVKNMLSSAF 676
+SV+ V+ ML +A
Sbjct: 601 ESVERVEKMLYNAL 614
>gi|406685621|gb|AFS51251.1| phytochrome P, partial [Saxegothaea conspicua]
Length = 661
Score = 881 bits (2277), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/620 (68%), Positives = 498/620 (80%), Gaps = 10/620 (1%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG IQPFGCM+AV+E NF ++ YSENA EMLDL P +VP +E L
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETNFRIIAYSENALEMLDLMPQSVPTMELGRHGGGAVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLF S A A++KAA ++NL+NPI +H + +GKPFYAI+HRIDVG+VIDLE
Sbjct: 61 TIGTDVRTLFIPSSARAIEKAAMAPDINLMNPIWVHSQYTGKPFYAIVHRIDVGMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
PV D ++ AGA++S KLA +AISRLQSLP+G+I LLCD +V +V +LTGYDRVMVYK
Sbjct: 121 PVRTGDASMSTAGAVQSQKLAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYP+TDIPQASRFL M+N+VRMICDC PVKVIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPSTDIPQASRFLFMQNRVRMICDCSTTPVKVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR---KL 357
++L QPL L GSTLRAPHGCHA+YM NMGSIASL M+V IN DE GR KL
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLAMAVIIN-GNDEEGGGTTSGRSTMKL 299
Query: 358 WGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLL 417
WGLVVCHHTSPR VPFPLRYACEFL+Q FG+Q+N EV+L+AQL EKHIL TQT+LCDMLL
Sbjct: 300 WGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMEVQLAAQLTEKHILWTQTLLCDMLL 359
Query: 418 RDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGL 477
RD+P+GIV+Q+P++MDLVKCDGAALYY G W LGVTPTE QIKDIAEWLLEYH STGL
Sbjct: 360 RDAPIGIVSQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGL 419
Query: 478 STDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGG 537
STDSL +AGYPGA +LGDAVCG+AA +ITS+DFLFWFRSHTAKE+KWGGAKH KD G
Sbjct: 420 STDSLADAGYPGAASLGDAVCGMAAARITSRDFLFWFRSHTAKEMKWGGAKHHPDDKDDG 479
Query: 538 RKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVD 597
R+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+ D
Sbjct: 480 RRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHTRLND 539
Query: 598 DRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV 657
+++ IDEL + +EMVRLIETA PILAVD++G VNGWN K AELTGL V +A+G +LV
Sbjct: 540 LKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNVKVAELTGLPVGEAMGKSLV 599
Query: 658 -DLVAGDSVDVVKNMLSSAF 676
DLV +S + V+ ML A
Sbjct: 600 HDLVFQESAESVEKMLYRAL 619
>gi|406685513|gb|AFS51197.1| phytochrome P, partial [Dacrydium xanthandrum]
Length = 660
Score = 881 bits (2277), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/624 (68%), Positives = 502/624 (80%), Gaps = 19/624 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG IQPFGCM+AV+E NF ++ +S+NA EMLDL P +VP++E + L
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETNFKIIAFSQNALEMLDLMPQSVPSMELGKLGGGEVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLFT S A L+KAA +++ +NPI +H + SGKPF AI+HRIDVG+VIDLE
Sbjct: 61 TIGTDVRTLFTPSSARGLEKAAMAPDISFMNPIWVHSQYSGKPFNAIVHRIDVGMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P+ D ++ AGA++S KLA +AISRLQSLPSG+I LLCD +V +V +LTGYDRVMVYK
Sbjct: 121 PLRTGDAAMSTAGAVQSQKLAVRAISRLQSLPSGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTSPR V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GI+TQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIMTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+G
Sbjct: 535 RLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAF 676
+LV DLV +S + V+ ML A
Sbjct: 595 KSLVHDLVLEESAECVEKMLYRAL 618
>gi|406685525|gb|AFS51203.1| phytochrome P, partial [Manoao colensoi]
Length = 657
Score = 881 bits (2276), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/614 (68%), Positives = 502/614 (81%), Gaps = 3/614 (0%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-QQDALTLGI 124
AYL R+QRG IQPFGCM+AV+E NF V+ YS+NA EMLD+ P +VPN++ + LT+G
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETNFKVIAYSQNALEMLDIMPQSVPNMDLGKPVLTIGT 60
Query: 125 DVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNP 184
DVRTLFT + A AL+KAA E++L+NPI +H + +GKPFYAI+HRIDVG+VIDLEP+
Sbjct: 61 DVRTLFTPASARALEKAAMTQEISLMNPIWVHSQHTGKPFYAIVHRIDVGMVIDLEPLRT 120
Query: 185 DDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHED 244
D ++AAGA++S KLA +AISRLQSLP+G+I +LCD +V +V +LTGYDRVM YKFHED
Sbjct: 121 GDASMSAAGAVQSQKLAVRAISRLQSLPAGDIGVLCDSVVEDVRELTGYDRVMAYKFHED 180
Query: 245 EHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLD 304
EHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMI DC A PV+VIQ +K+
Sbjct: 181 EHGEVVAEMRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMIFDCSANPVQVIQSEKMR 240
Query: 305 QPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDE-LDNDQEQGRKLWGLVVC 363
+PL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ++E KLWGLVVC
Sbjct: 241 RPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGAGTSGRSSMKLWGLVVC 300
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HHTSPR VPFPLRYACEFL+Q FG+Q+N E+ L+AQL EKHILRTQT+LCDMLLRD+P+G
Sbjct: 301 HHTSPRAVPFPLRYACEFLMQAFGLQLNMELHLAAQLTEKHILRTQTLLCDMLLRDAPIG 360
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+P++MDLVKCDGAALYY G W LGVTPTE Q+KDIA+WLLEYH STGLSTDSL
Sbjct: 361 IVTQSPSIMDLVKCDGAALYYGGTTWSLGVTPTEAQVKDIADWLLEYHGDSTGLSTDSLA 420
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
+AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPR
Sbjct: 421 DAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPR 480
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD ++K +V+ D +++ I
Sbjct: 481 SSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSNTKTMVHARLNDLKLQGI 540
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V + +G +LV DLV
Sbjct: 541 DELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGETMGKSLVHDLVFE 600
Query: 663 DSVDVVKNMLSSAF 676
+S + V+ ML A
Sbjct: 601 ESAESVQKMLYRAL 614
>gi|38037208|gb|AAR08426.1| phytochrome A [Orobanche minor]
Length = 1123
Score = 880 bits (2275), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/683 (61%), Positives = 532/683 (77%), Gaps = 12/683 (1%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSNV--P 60
++++ S ++SA+S+Q+AR+ AQTSIDAKL DF+ES FDYSTSV +++ + + P
Sbjct: 2 ASSQPGRSSTNSAQSRQSARIIAQTSIDAKLDADFEESGSSFDYSTSVRVTNYPAGLSEP 61
Query: 61 SS--TVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD 118
S +AYL ++Q+G+LIQ FGC++A+DE+ F V+ YSENAPEML + HAVP++
Sbjct: 62 RSDKVTTAYLHQIQKGKLIQQFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGDHP 121
Query: 119 ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
L +G D+RT+FT+ AAALQKA FGEV+LLNPIL+HCKTSGKPFYAI+HR+ L+ID
Sbjct: 122 LLGIGSDIRTIFTAPSAAALQKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIID 181
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
EPV P +VP+TAAGAL+SYKLAAKAI+ LQ+LP G+I LCD +V +V +LTGYDRVM+
Sbjct: 182 FEPVKPHEVPMTAAGALQSYKLAAKAIACLQALPGGSIERLCDTMVQQVFELTGYDRVMI 241
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFHED+HGEV E +P LEPY+G HYPATDIPQA+RFL MKNKVRMICDC A VKV+
Sbjct: 242 YKFHEDDHGEVFTEITKPGLEPYVGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKVV 301
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG---- 354
QD L L+LCGSTLRAPHGCH++YMENM SIASLVMSV +NE DE D G
Sbjct: 302 QDDNLPFDLTLCGSTLRAPHGCHSQYMENMNSIASLVMSVVVNEG-DEDGPDSSSGPYKR 360
Query: 355 RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCD 414
++LWGLVVCH+T PRF+PFPLRYACEFL+QVF + VNKE+EL Q+ EK+ILRTQT+LCD
Sbjct: 361 KRLWGLVVCHNTCPRFIPFPLRYACEFLVQVFSIHVNKELELENQMLEKNILRTQTLLCD 420
Query: 415 MLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGS 474
+LLRD P+GIV+Q+PNVMDLVKCDGA L ++ + LG+TPT+ QI+DI WL EYH+ S
Sbjct: 421 LLLRDVPLGIVSQSPNVMDLVKCDGAILLHKRTKYRLGLTPTDFQIRDIVSWLDEYHQDS 480
Query: 475 TGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGK 534
TGLSTDSL +AG+PGALALG+A+CG+AAVKIT +D+LFWFRSHTA EI+WGGAKH+ K
Sbjct: 481 TGLSTDSLYDAGFPGALALGNALCGMAAVKITDEDWLFWFRSHTAAEIRWGGAKHELEAK 540
Query: 535 DGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAED-SKMIVNV 593
D GRKMHPRSSF+AFLEVVK RSLPW+D EMD IHSLQLILR + ++ +D ++
Sbjct: 541 DDGRKMHPRSSFRAFLEVVKTRSLPWKDYEMDGIHSLQLILRNAYKESEEKDLESREIHA 600
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
+ +I+ + E+ +T+EMVRLIETA VPI +V G VNGWN+K ++LTGL+V +AIG
Sbjct: 601 RLNELQIDGVKEIEAVTSEMVRLIETATVPIFSVGVDGLVNGWNTKISDLTGLSVVEAIG 660
Query: 654 TALVDLVAGDSVDVVKNMLSSAF 676
+ LV S D V ML A
Sbjct: 661 MHFLALVEDSSADTVSKMLGLAL 683
>gi|406685511|gb|AFS51196.1| phytochrome P, partial [Dacrydium nausoriense]
Length = 660
Score = 880 bits (2275), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/624 (68%), Positives = 502/624 (80%), Gaps = 19/624 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG IQP GCM+AV+E NF ++ +S+NA EMLDL P +VP +E + L
Sbjct: 1 AYLSRMQRGGTIQPLGCMLAVEETNFKIIAFSQNALEMLDLMPQSVPTMELGKLGGGEVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLFT S A +L+KAA +++L+NPI +H + SGKPF AI+HRIDVG+VIDLE
Sbjct: 61 TIGTDVRTLFTPSSARSLEKAAMAPDISLMNPIWVHSQYSGKPFNAIVHRIDVGMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P+ D ++ AGA++S KLA +AISRLQSLPSG+I LLCD +V +V +LTGYDRVMVYK
Sbjct: 121 PLRTGDAAMSTAGAVQSQKLAVRAISRLQSLPSGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTSPR V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GI+TQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIMTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+G
Sbjct: 535 RLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAF 676
+LV DLV +S + V+ ML A
Sbjct: 595 KSLVHDLVLEESAECVEKMLYRAL 618
>gi|406685507|gb|AFS51194.1| phytochrome P, partial [Dacrydium balansae]
Length = 660
Score = 880 bits (2275), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/624 (68%), Positives = 503/624 (80%), Gaps = 19/624 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG IQP GCM+AV+E NF ++ +S+NA EMLDL P +VP++E + L
Sbjct: 1 AYLSRMQRGGTIQPLGCMLAVEETNFKIIAFSQNALEMLDLMPQSVPSMELGKLGGGEVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLFT S A +L+KAA +++L+NPI +H + SGKPF AI+HRIDVG+VIDLE
Sbjct: 61 TIGTDVRTLFTPSSARSLEKAAMAPDISLMNPIWVHSQYSGKPFNAIVHRIDVGMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P+ D ++ AGA++S KLA +AISRLQSLPSG+I LLCD +V +V +LTGYDRVMVYK
Sbjct: 121 PLRTGDAAMSTAGAVQSQKLAVRAISRLQSLPSGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTSPR V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GI+TQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIMTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+G
Sbjct: 535 RLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAF 676
+LV DLV +S + V+ ML A
Sbjct: 595 KSLVHDLVLEESAECVEKMLYRAL 618
>gi|406685471|gb|AFS51176.1| phytochrome P, partial [Araucaria laubenfelsii]
Length = 677
Score = 880 bits (2275), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/635 (67%), Positives = 504/635 (79%), Gaps = 24/635 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD------- 118
AYL R+QRG IQPFGCM+AV+E F ++ YSENA EMLDL P +VPN++
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFLIIAYSENAVEMLDLMPQSVPNMDMDRDEAMTSH 60
Query: 119 ----ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
+T+G DVRTLFT+S A AL+KAA E++L+NPI +H K + KPFYAI+HRIDVG
Sbjct: 61 GGGRVMTIGTDVRTLFTTSSARALEKAAMAHEISLMNPIWVHSKNTNKPFYAIVHRIDVG 120
Query: 175 LVIDLEPVNPD-----DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSD 229
+V+DLEPV D ++AAGA++S KLA +AISRLQSLP+G+I LLCD +V +V +
Sbjct: 121 MVMDLEPVRTGSGGGGDAALSAAGAVQSQKLAVRAISRLQSLPAGDIGLLCDTVVEDVRE 180
Query: 230 LTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICD 289
LTGYDRVMVYKFHEDEHGEV+AE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICD
Sbjct: 181 LTGYDRVMVYKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICD 240
Query: 290 CLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN 349
C A PVKVIQ ++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN EDE
Sbjct: 241 CRAAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEGGG 300
Query: 350 DQEQGR-------KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLRE 402
G KLWGLVVCHHTSPR VPFPLRYACEFL+Q FG+Q+N E++L+AQL E
Sbjct: 301 GGGSGSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTE 360
Query: 403 KHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKD 462
KHILRTQT+LCDMLLRD+P+GIVT +P++MDLVKCDGAALYY G W+LGVTPTE QIKD
Sbjct: 361 KHILRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKD 420
Query: 463 IAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEI 522
IA+WLLEYH STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+
Sbjct: 421 IADWLLEYHVDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEM 480
Query: 523 KWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDE 582
KWGGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD
Sbjct: 481 KWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDI 540
Query: 583 VAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAE 642
++K +V+ D +++ IDEL + +EMVRLIETA PILAVD++G +NGWN+K AE
Sbjct: 541 DDSNTKTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAE 600
Query: 643 LTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
LTGL V +A+G +LV DL+ +S + V ML A
Sbjct: 601 LTGLPVGEAMGKSLVHDLIFEESANTVDKMLYQAL 635
>gi|406685629|gb|AFS51255.1| phytochrome P, partial [Abies homolepis]
Length = 656
Score = 880 bits (2274), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/614 (68%), Positives = 505/614 (82%), Gaps = 3/614 (0%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ--QDALTLG 123
AYL R+QRG +QPFGC++AV+E F ++ YSENA EMLDLAP +VP++EQ Q+ LT+G
Sbjct: 1 AYLSRIQRGGRVQPFGCVLAVEETTFRIIAYSENALEMLDLAPQSVPSMEQPQQEVLTIG 60
Query: 124 IDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVN 183
DVRTLFT++ A +L+KAA E++L+NPI +HCK S KPFYAI+HRIDVG+VID EP+
Sbjct: 61 TDVRTLFTAASANSLEKAAVAHEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDFEPLR 120
Query: 184 PDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHE 243
D ++AAGA++S KLA +AISRLQSLPSG+I LLCD +V V +LTGYDRVMVYKFHE
Sbjct: 121 IGDAFMSAAGAVQSQKLAVRAISRLQSLPSGDIGLLCDTVVENVRELTGYDRVMVYKFHE 180
Query: 244 DEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKL 303
DEHGEVVAE RR +LEPYLG HYPATDIPQASRFL M+N+VRMICDC+A PVKVIQ ++L
Sbjct: 181 DEHGEVVAEIRRSNLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQSEEL 240
Query: 304 DQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVC 363
QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN +DE KLWGLVVC
Sbjct: 241 MQPLCLVGSTLRAPHGCHAQYMGNMGSIASLVMAVIINGNDDEAGGTGRNSLKLWGLVVC 300
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HHTSPR VPFPLRYACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+G
Sbjct: 301 HHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIG 360
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+P++MDLVKCDGAAL+Y G W+LGVTPT+ QIK IA+WLLE+H STGLSTDSL
Sbjct: 361 IVTQSPSIMDLVKCDGAALHYGGMCWMLGVTPTKAQIKGIADWLLEHHGDSTGLSTDSLA 420
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
+AGYP A +LGDAVCG+A +ITSKDFLFWFRSHTAKE+KWGGAKH K GR+MHPR
Sbjct: 421 DAGYPSAASLGDAVCGMAPARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKGDGRRMHPR 480
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SS KAFLEVVK+RSLPW++VE+DAIHSLQLILRGS QD +K +V+ D R++ I
Sbjct: 481 SSLKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDIDDSGTKTMVHSRLNDLRLQGI 540
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+G +LV DL+
Sbjct: 541 DELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGMSLVQDLLFE 600
Query: 663 DSVDVVKNMLSSAF 676
+SV+ V+ ML +A
Sbjct: 601 ESVERVEKMLYNAL 614
>gi|406685509|gb|AFS51195.1| phytochrome P, partial [Dacrydium guillauminii]
Length = 660
Score = 880 bits (2273), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/624 (68%), Positives = 502/624 (80%), Gaps = 19/624 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG IQP GCM+AV+E NF ++ +S+NA EMLDL P +VP++E + L
Sbjct: 1 AYLSRMQRGGTIQPLGCMLAVEETNFKIIAFSQNALEMLDLMPQSVPSMELGKLGGGEVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLFT S A +L+KAA +++L+NPI +H + SGKPF AI+HRIDVG+VIDLE
Sbjct: 61 TIGTDVRTLFTPSSARSLEKAAMAPDISLMNPIWVHSQYSGKPFNAIVHRIDVGMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P+ D ++ AGA++S KLA +AISRLQSLPSG+I LLCD +V +V +LTGYDRVMVYK
Sbjct: 121 PLRTGDAAMSTAGAVQSQKLAVRAISRLQSLPSGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTSPR V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GI+TQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDI EWLLEYH
Sbjct: 355 DMLLRDAPIGIMTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDITEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+G
Sbjct: 535 RLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAF 676
+LV DLV +S + V+ ML A
Sbjct: 595 KSLVHDLVLEESAECVEKMLYRAL 618
>gi|406685475|gb|AFS51178.1| phytochrome P, partial [Araucaria montana]
Length = 677
Score = 880 bits (2273), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/635 (67%), Positives = 504/635 (79%), Gaps = 24/635 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD------- 118
AYL R+QRG IQPFGCM+AV+E F ++ YSENA EMLDL P +VPN++
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFLIIAYSENAVEMLDLMPQSVPNMDMDRDEAMTSH 60
Query: 119 ----ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
+T+G DVRTLFT+S A AL+KAA E++L+NPI +H K + KPFYAI+HRIDVG
Sbjct: 61 GGGRVMTIGTDVRTLFTTSSARALEKAAMAHEISLMNPIWVHSKNTNKPFYAIVHRIDVG 120
Query: 175 LVIDLEPVNPD-----DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSD 229
+V+DLEPV D ++AAGA++S KLA +AISRLQSLP+G+I LLCD +V +V +
Sbjct: 121 MVMDLEPVRTGSGGGGDAALSAAGAVQSQKLAVRAISRLQSLPAGDIGLLCDTVVEDVRE 180
Query: 230 LTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICD 289
LTGYDRVMVYKFHEDEHGEV+AE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICD
Sbjct: 181 LTGYDRVMVYKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICD 240
Query: 290 CLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN 349
C A PVKVIQ ++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN EDE
Sbjct: 241 CRAAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEGGG 300
Query: 350 DQEQGR-------KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLRE 402
G KLWGLVVCHHTSPR VPFPLRYACEFL+Q FG+Q+N E++L+AQL E
Sbjct: 301 GGGSGSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTE 360
Query: 403 KHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKD 462
KHILRTQT+LCDMLLRD+P+GIVT +P++MDLVKCDGAALYY G W+LGVTPTE QIKD
Sbjct: 361 KHILRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKD 420
Query: 463 IAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEI 522
IA+WLLEYH STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+
Sbjct: 421 IADWLLEYHVDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEM 480
Query: 523 KWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDE 582
KWGGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD
Sbjct: 481 KWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDI 540
Query: 583 VAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAE 642
++K +V+ D +++ IDEL + +EMVRLIETA PILAVD++G +NGWN+K AE
Sbjct: 541 DDSNTKTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAE 600
Query: 643 LTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
LTGL V +A+G +LV DL+ +S + V ML A
Sbjct: 601 LTGLPVGEAMGKSLVHDLIFEESANTVDKMLYHAL 635
>gi|406685657|gb|AFS51269.1| phytochrome P, partial [Tsuga canadensis]
Length = 584
Score = 879 bits (2272), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/583 (70%), Positives = 488/583 (83%), Gaps = 2/583 (0%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQ--DALTLG 123
AYL R+QRG IQPFGC++AV+E FT++ YSENA EMLDLAP +VP++EQ +ALT+G
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEETTFTIIAYSENAVEMLDLAPQSVPSMEQPQPEALTIG 60
Query: 124 IDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVN 183
DVRTLFT++ A +L+KAA E++L+NPI +HCK S KPFYAI+HRIDVG+VID EP+
Sbjct: 61 TDVRTLFTAASAHSLEKAAVAQEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDFEPLR 120
Query: 184 PDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHE 243
D ++AAGA++S KLA +AISRLQSLP G+I LLCD +V V +LTGYDRVMVYKFHE
Sbjct: 121 TGDAVMSAAGAVQSQKLAVRAISRLQSLPCGDIGLLCDTVVENVRELTGYDRVMVYKFHE 180
Query: 244 DEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKL 303
DEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC+A PVKVIQ ++L
Sbjct: 181 DEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQSEEL 240
Query: 304 DQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVC 363
QPL L GSTLRAPHGCHA+YM NMGS+ASLVM+V IN +DE KLWGLVVC
Sbjct: 241 MQPLCLVGSTLRAPHGCHAQYMANMGSVASLVMAVIINGNDDEAGGSGRNSMKLWGLVVC 300
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HHTSPR VPFPLRYACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+G
Sbjct: 301 HHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIG 360
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+P++MDL+KCDGAALYY G W+LGVTPTE QIKDIA+WLLE+H STGLSTDSL
Sbjct: 361 IVTQSPSIMDLIKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTDSLA 420
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
+AGYPGA +LGDAVCG+A+ +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPR
Sbjct: 421 DAGYPGAASLGDAVCGMASARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPR 480
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAFLEVVK+RSLPW++VE+DAIHSLQLILRGS QD +K +V+ D R++ I
Sbjct: 481 SSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDIDDSGTKTMVHARLNDLRLQGI 540
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGL 646
DEL + +EMVRLIETA PILAVD++G VNGWN K AELTGL
Sbjct: 541 DELSSVASEMVRLIETATAPILAVDSNGLVNGWNGKVAELTGL 583
>gi|406685545|gb|AFS51213.1| phytochrome P, partial [Podocarpus lawrencei]
Length = 660
Score = 879 bits (2272), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/624 (67%), Positives = 501/624 (80%), Gaps = 19/624 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG IQPFGC++AV+E NF ++ YS+NA EMLDL P +VP +E + L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLFT+S A AL+KAA +++L+NPI +H + SGKPF AI+HRIDVG+VIDLE
Sbjct: 61 TIGTDVRTLFTASSARALEKAATAPDISLMNPIWVHSQYSGKPFNAIVHRIDVGMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P D ++ AGA++S K A +AISRLQSLP+G+I LLCD +V +V +LTGYDRVMVYK
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIP+ASRFL M+N+VRMICDC A PVKVIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPRASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGPSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTSPR V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+G
Sbjct: 535 RLTDLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAF 676
+LV D+V +S + ++ ML A
Sbjct: 595 KSLVHDVVLEESAECLEKMLYRAL 618
>gi|406685631|gb|AFS51256.1| phytochrome P, partial [Abies lasiocarpa]
Length = 656
Score = 879 bits (2271), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/614 (68%), Positives = 505/614 (82%), Gaps = 3/614 (0%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ--QDALTLG 123
AYL R+QRG IQPFGC++AV+E F ++ YSENA EMLDLAP +V ++EQ Q+ LT+G
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENALEMLDLAPQSVLSMEQPQQEVLTIG 60
Query: 124 IDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVN 183
DVRTLFT++ A +L+KAA E++L+NPI +HCK S KPFYAI+HRIDVG+VID EP+
Sbjct: 61 TDVRTLFTAASANSLEKAAVAHEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDFEPLR 120
Query: 184 PDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHE 243
D ++AAGA++S KLA +AISRLQSLPSG+I LLCD +V V +LTGYDRVMVYKFHE
Sbjct: 121 TGDAFMSAAGAVQSQKLAVRAISRLQSLPSGDIGLLCDTVVENVRELTGYDRVMVYKFHE 180
Query: 244 DEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKL 303
DEHGEVVAE RR +LEPYLG HYPATDIPQASRFL M+N+VRMICDC+A PVKVIQ ++L
Sbjct: 181 DEHGEVVAEIRRSNLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQSEEL 240
Query: 304 DQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVC 363
QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN +DE KLWGLVVC
Sbjct: 241 MQPLCLVGSTLRAPHGCHAQYMGNMGSIASLVMAVIINGNDDEAGGTGRNSLKLWGLVVC 300
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HHTSPR VPFPLRYACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+G
Sbjct: 301 HHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIG 360
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+P++MDLVKCDGAAL+Y G W+LGVTPTE QIKDIA+WLLE+H S GLSTDSL
Sbjct: 361 IVTQSPSIMDLVKCDGAALHYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSAGLSTDSLA 420
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
+AGYPGA +LGDAVCG+A+ +ITSK+FLFWFRSHTAKE+KWGGAKH KD GR+MHPR
Sbjct: 421 DAGYPGAASLGDAVCGMASARITSKEFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPR 480
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKA LEVVK+RS PW++VE+DAIHSLQLILRGS QD +K +V+ D R++ I
Sbjct: 481 SSFKALLEVVKRRSSPWDNVEIDAIHSLQLILRGSFQDIDDSGTKTMVHSRLNDLRLQGI 540
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+G +LV D +
Sbjct: 541 DELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGMSLVQDPLFE 600
Query: 663 DSVDVVKNMLSSAF 676
+SV+ V+ ML +A
Sbjct: 601 ESVERVEKMLYNAL 614
>gi|406685623|gb|AFS51252.1| phytochrome P, partial [Sundacarpus amarus]
Length = 670
Score = 879 bits (2271), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/625 (67%), Positives = 504/625 (80%), Gaps = 20/625 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD------A 119
AYL R+QRG IQPFGCM+ V+E F ++ YSENA EMLDL P +VPN++ D
Sbjct: 1 AYLSRMQRGGTIQPFGCMLTVEEAGFKIIAYSENALEMLDLMPQSVPNMDLGDPAGGGAV 60
Query: 120 LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDL 179
L +G DVRTLFT + A AL+KAA E++L+NPI +H + +GKPFYAI+HRIDVG+V+DL
Sbjct: 61 LAIGTDVRTLFTPASARALEKAAVAREISLMNPIWVHSQYTGKPFYAIVHRIDVGIVVDL 120
Query: 180 EPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVY 239
EP+ D ++AAGA++S KLA +AISRLQSLP+G++ LLCD +V +V +LTGYDRVM Y
Sbjct: 121 EPLRMGDAAMSAAGAVQSQKLAVRAISRLQSLPAGDVGLLCDTVVEDVRELTGYDRVMAY 180
Query: 240 KFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQ 299
KFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ
Sbjct: 181 KFHEDEHGEVVAEIRRSDLEPYLGSHYPATDIPQASRFLFMQNRVRMICDCSATPVRVIQ 240
Query: 300 DKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG----- 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 SEELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIIN------GNDEEGGGTSGR 294
Query: 355 --RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
KLWGLVVCHHTSPR VPFPLRYACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+L
Sbjct: 295 TSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLL 354
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDMLLRD+P+GIV+Q+P++M+LVKCDGAALYY G W LGVTPTE QIKDIA+WLLEYH
Sbjct: 355 CDMLLRDAPIGIVSQSPSIMNLVKCDGAALYYGGTTWCLGVTPTEAQIKDIADWLLEYHG 414
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 DSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPD 474
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVN 592
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD ++K +V+
Sbjct: 475 DKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSNTKTMVH 534
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +++ IDEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+
Sbjct: 535 ARLNDMKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAM 594
Query: 653 GTALV-DLVAGDSVDVVKNMLSSAF 676
G +LV DLV +S + V+ ML A
Sbjct: 595 GKSLVHDLVFEESAESVEKMLYRAL 619
>gi|406685477|gb|AFS51179.1| phytochrome P, partial [Araucaria muelleri]
Length = 677
Score = 878 bits (2269), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/635 (66%), Positives = 503/635 (79%), Gaps = 24/635 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD------- 118
AYL R+QRG IQPFGCM+AV+E F ++ YSENA EMLDL P +VPN++
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFLIIAYSENAVEMLDLMPQSVPNMDMDRDEAMTSH 60
Query: 119 ----ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
+T+G DVRTLFT+S A AL+KAA E++L+NPI +H K + KPFYAI+HRIDVG
Sbjct: 61 GGGRVMTIGTDVRTLFTTSSARALEKAAMAHEISLMNPIWVHSKNTNKPFYAIVHRIDVG 120
Query: 175 LVIDLEPVNPD-----DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSD 229
+V+DLEPV D ++AAGA++S KLA +AISRLQSLP+G+I LLCD +V +V +
Sbjct: 121 MVMDLEPVRTGSGGGGDAALSAAGAVQSQKLAVRAISRLQSLPAGDIGLLCDTVVEDVRE 180
Query: 230 LTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICD 289
LTGYDRVMVYKFHEDEHGEV+AE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICD
Sbjct: 181 LTGYDRVMVYKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICD 240
Query: 290 CLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN 349
C A PVKVIQ ++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN EDE
Sbjct: 241 CRAAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEGGG 300
Query: 350 DQEQGR-------KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLRE 402
G KLWGLVVCHHTSPR VPFPLRYACEFL+Q FG+Q+N E++L+AQL E
Sbjct: 301 GGGSGSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTE 360
Query: 403 KHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKD 462
KHILRTQT+LCDMLLRD+P+GIVT +P++MDLVKCDGA LYY G W+LGVTPTE QIKD
Sbjct: 361 KHILRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGATLYYGGMCWMLGVTPTEAQIKD 420
Query: 463 IAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEI 522
IA+WLLEYH STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+
Sbjct: 421 IADWLLEYHVDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEM 480
Query: 523 KWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDE 582
KWGGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD
Sbjct: 481 KWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDI 540
Query: 583 VAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAE 642
++K +V+ D +++ IDEL + +EMVRLIETA PILAVD++G +NGWN+K AE
Sbjct: 541 DDSNTKTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAE 600
Query: 643 LTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
LTGL V +A+G +LV DL+ +S + V ML A
Sbjct: 601 LTGLPVGEAMGKSLVHDLIFEESANTVDKMLYHAL 635
>gi|406685627|gb|AFS51254.1| phytochrome P, partial [Abies firma]
Length = 656
Score = 878 bits (2269), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/614 (68%), Positives = 504/614 (82%), Gaps = 3/614 (0%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ--QDALTLG 123
AYL R+QRG +QPFGC++AV+E F ++ YSENA EMLDLAP +VP++EQ Q+ LT+G
Sbjct: 1 AYLSRIQRGGRVQPFGCVLAVEETTFRIIAYSENALEMLDLAPQSVPSMEQPQQEVLTIG 60
Query: 124 IDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVN 183
DVRTLFT++ A +L+KAA E++L+NPI +HCK S KPFYAI+HRIDVG+VID EP+
Sbjct: 61 TDVRTLFTAASANSLEKAAVAHEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDFEPLR 120
Query: 184 PDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHE 243
D ++AAGA++S KLA +AISRLQSLPSG+I LLCD +V V +LTGYDRVMVYKFHE
Sbjct: 121 IGDAFMSAAGAVQSQKLAVRAISRLQSLPSGDIGLLCDTVVENVRELTGYDRVMVYKFHE 180
Query: 244 DEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKL 303
DEHG RR +LEPYLG HYPATDIPQASRFL M+N+VRMICDC+A PVKVIQ ++L
Sbjct: 181 DEHGGSCRGIRRSNLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQSEEL 240
Query: 304 DQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVC 363
QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN +DE KLWGLVVC
Sbjct: 241 MQPLCLVGSTLRAPHGCHAQYMGNMGSIASLVMAVIINGNDDEAGGTGRNSLKLWGLVVC 300
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HHTSPR VPFPLRYACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+G
Sbjct: 301 HHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIG 360
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+P++MDLVKCDGAAL+Y G W+LGVTPTE QIKDIA+WLLE+H STGLSTDSL
Sbjct: 361 IVTQSPSIMDLVKCDGAALHYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTDSLA 420
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
+AGYP A +LGDAVCG+A+ +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPR
Sbjct: 421 DAGYPSAASLGDAVCGMASARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPR 480
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAFLEVVK+RSLPW++VE+DAIHSLQLILRGS QD +K +V+ D R++ I
Sbjct: 481 SSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDIDDSGTKTMVHSRLNDLRLQGI 540
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+G +LV DL+
Sbjct: 541 DELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGMSLVQDLLFE 600
Query: 663 DSVDVVKNMLSSAF 676
+SV+ V+ ML +A
Sbjct: 601 ESVERVEKMLYNAL 614
>gi|406685543|gb|AFS51212.1| phytochrome P, partial [Podocarpus acutifolius]
Length = 619
Score = 878 bits (2269), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/624 (67%), Positives = 500/624 (80%), Gaps = 19/624 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG IQPFGC++AV+E NF ++ YS+NA EMLDL P +VP +E + L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLFT+S A AL+KAA +++L+NPI +H + SGKPF AI+HRIDVG+VIDLE
Sbjct: 61 TIGTDVRTLFTASSARALEKAATAPDISLMNPIWVHSQYSGKPFNAIVHRIDVGMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P D ++ AGA++S K A +AISRLQSLP+G+I LLCD +V +V +LTGYDRVMVYK
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGPSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTSPR V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+R LPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRGLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+G
Sbjct: 535 RLTDLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAF 676
+LV D+V +S + ++ ML A
Sbjct: 595 KSLVHDVVLEESAECLEKMLYRAL 618
>gi|406685613|gb|AFS51247.1| phytochrome P, partial [Prumnopitys ferruginoides]
Length = 662
Score = 878 bits (2268), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/625 (69%), Positives = 505/625 (80%), Gaps = 20/625 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD------A 119
AYL R+QRG IQPFGCM+AV+E F ++ YS+NA EMLDL P AVPN+E
Sbjct: 1 AYLSRLQRGGTIQPFGCMLAVEEMGFKIIAYSQNALEMLDLMPQAVPNMELGKPGGGGAV 60
Query: 120 LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDL 179
LT+G DVRTLFT + A AL KAA E++L+NPI +H + +GKPFYAI+HRIDVG+VIDL
Sbjct: 61 LTIGTDVRTLFTPASARALAKAAMAREISLMNPIWVHSQYTGKPFYAIVHRIDVGIVIDL 120
Query: 180 EPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVY 239
EPV D ++AAGA++S KLA +AISRLQSLPSG+I LLCD +V +V +LTGYDRVMVY
Sbjct: 121 EPVRMGDASMSAAGAVQSQKLAVRAISRLQSLPSGDIGLLCDTVVEDVRELTGYDRVMVY 180
Query: 240 KFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQ 299
KFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKV+Q
Sbjct: 181 KFHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSANPVKVVQ 240
Query: 300 DKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG----- 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 SEELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIIN------GNDEEGGWTSGR 294
Query: 355 --RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
KLWGLVVCHHTSPR VPFPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+L
Sbjct: 295 VSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLL 354
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIA+WLLEYH
Sbjct: 355 CDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGXTWCLGVTPTEAQIKDIADWLLEYHG 414
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 DSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPD 474
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVN 592
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD ++K +V+
Sbjct: 475 DKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSNTKTMVH 534
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +++ IDEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+
Sbjct: 535 ARLNDMKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAM 594
Query: 653 GTALV-DLVAGDSVDVVKNMLSSAF 676
G +LV DLV +S + V+ ML A
Sbjct: 595 GKSLVHDLVFEESAESVEKMLYRAL 619
>gi|406685625|gb|AFS51253.1| phytochrome P, partial [Abies concolor]
Length = 656
Score = 878 bits (2268), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/614 (68%), Positives = 504/614 (82%), Gaps = 3/614 (0%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ--QDALTLG 123
AYL R+QRG +QPFGC+ AV+E F ++ YSENA EMLDLAP +VP++EQ Q+ LT+G
Sbjct: 1 AYLSRIQRGGRVQPFGCVPAVEETTFRIIAYSENALEMLDLAPQSVPSMEQPQQEVLTIG 60
Query: 124 IDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVN 183
DVRTLFT++ A +L+KAA E++L+NPI +HCK S KPFYAI+HRIDVG+VID EP+
Sbjct: 61 TDVRTLFTAASANSLEKAAVAHEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDFEPLR 120
Query: 184 PDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHE 243
D ++AAGA++S KLA +AISRLQSLPSG+I LLCD +V V +LTGYDRVMVYKFHE
Sbjct: 121 IGDAFMSAAGAVQSQKLAVRAISRLQSLPSGDIGLLCDTVVENVRELTGYDRVMVYKFHE 180
Query: 244 DEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKL 303
DEHGEVVAE RR +LEPYLG HYPATDIPQASRF M+N+VRMICDC+A PVKVIQ ++L
Sbjct: 181 DEHGEVVAEIRRSNLEPYLGLHYPATDIPQASRFSFMQNRVRMICDCMATPVKVIQSEEL 240
Query: 304 DQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVC 363
QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN +DE KLWGLVVC
Sbjct: 241 MQPLCLVGSTLRAPHGCHAQYMGNMGSIASLVMAVIINGNDDEAGGTGRNSLKLWGLVVC 300
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HHTSPR VPFPLRYACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+G
Sbjct: 301 HHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIG 360
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+P++MDLVKCDGAAL+Y G W+LGVTPTE QIKDIA+WLLE+H STGLSTDSL
Sbjct: 361 IVTQSPSIMDLVKCDGAALHYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTDSLA 420
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
+AGYP A +LGDAVCG+A+ +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPR
Sbjct: 421 DAGYPSAASLGDAVCGMASARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPR 480
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAFLEVVK+RSLPW++VE+DAIHSLQLILRGS QD +K +V+ D R++ I
Sbjct: 481 SSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDIDDSGTKTMVHSRLNDLRLQGI 540
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + +EMVRLIETA PILAVD++G VNG K AELTGL V +A+G +LV DL+
Sbjct: 541 DELSSVASEMVRLIETATAPILAVDSNGLVNGMECKVAELTGLPVGEAMGMSLVQDLLFE 600
Query: 663 DSVDVVKNMLSSAF 676
+SV+ V+ ML +A
Sbjct: 601 ESVERVEKMLYNAL 614
>gi|406685557|gb|AFS51219.1| phytochrome P, partial [Podocarpus coriaceus]
Length = 647
Score = 877 bits (2267), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/624 (67%), Positives = 499/624 (79%), Gaps = 19/624 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG IQPFGC++AV+E NF ++ YS+NA EMLDL P +VP +E +AL
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEAL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLFT S A AL+KAA +++L+NPI +H + SGKPF AI+HRIDVG+V+DLE
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSQYSGKPFNAIVHRIDVGMVVDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P D ++ AGA++S K A +AISRLQSLP+G+I LLCD +V +V +LTGYDRVMVYK
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV VIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVNVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTSPR V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSRTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+G
Sbjct: 535 RLTDLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAF 676
+LV D+V + + V+ ML A
Sbjct: 595 KSLVHDVVLEECAECVEKMLYRAL 618
>gi|406685561|gb|AFS51221.1| phytochrome P, partial [Podocarpus cunninghamii]
Length = 660
Score = 877 bits (2267), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/624 (67%), Positives = 499/624 (79%), Gaps = 19/624 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG IQPFGC++AV+E NF ++ YS+NA EMLDL P +VP +E + L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLFT S A AL+KAA +++L+NPI +H + SGKPF AI+HRIDVG+VIDLE
Sbjct: 61 TIGTDVRTLFTPSSARALEKAATAPDISLMNPIWVHSQYSGKPFNAIVHRIDVGMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P D ++ AGA++S K A +AISRLQSLP+G+I LLCD +V +V +LTGYDRVMVYK
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGPSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTSPR V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD R+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDSRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+G
Sbjct: 535 RLTDLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAF 676
+LV D+V +S + ++ ML A
Sbjct: 595 KSLVHDVVLEESAECLEKMLYRAL 618
>gi|406685467|gb|AFS51174.1| phytochrome P, partial [Araucaria humboldtensis]
Length = 677
Score = 877 bits (2267), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/635 (66%), Positives = 503/635 (79%), Gaps = 24/635 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD------- 118
AYL R+QRG IQPFGCM+AV+E F ++ YSENA EMLDL P +VPN++
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFLIIAYSENAVEMLDLMPQSVPNMDMDRDEAMTSH 60
Query: 119 ----ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
+T+G DVRTLFT+S A AL+KAA E++L+NPI +H K + KPFYAI+HRIDVG
Sbjct: 61 GGGRVMTIGTDVRTLFTTSSARALEKAAMAHEISLMNPIWVHSKNTNKPFYAIVHRIDVG 120
Query: 175 LVIDLEPVNPD-----DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSD 229
+V+DLEPV D ++AAGA++S KLA +AISRLQSLP+G+I LLCD +V +V +
Sbjct: 121 MVMDLEPVRTGSGGGGDAALSAAGAVQSQKLAVRAISRLQSLPAGDIGLLCDTVVEDVRE 180
Query: 230 LTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICD 289
LTGYDRVMVYKFHEDEHGEV+AE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICD
Sbjct: 181 LTGYDRVMVYKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICD 240
Query: 290 CLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN 349
C A PVKVIQ ++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN EDE
Sbjct: 241 CRAAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEGGG 300
Query: 350 DQEQGR-------KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLRE 402
G KLWGLVVCHHTSPR VPFPLRYACEFL+Q FG+Q+N E++L+AQL E
Sbjct: 301 GGGSGSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTE 360
Query: 403 KHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKD 462
KHILRTQT+LCDMLLRD+P+GIVT +P++MDLVKCDGAALYY G W+LGVTPTE QIKD
Sbjct: 361 KHILRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKD 420
Query: 463 IAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEI 522
IA+WLLEYH STGL TDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+
Sbjct: 421 IADWLLEYHVDSTGLGTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEM 480
Query: 523 KWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDE 582
KWGGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD
Sbjct: 481 KWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDI 540
Query: 583 VAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAE 642
++K +V+ D +++ IDEL + +EMVRLIETA PILAVD++G +NGWN+K AE
Sbjct: 541 DDSNTKTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAE 600
Query: 643 LTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
LTGL V +A+G +LV DL+ +S + V ML A
Sbjct: 601 LTGLPVGEAMGKSLVHDLIFEESANTVDKMLYHAL 635
>gi|406685549|gb|AFS51215.1| phytochrome P, partial [Podocarpus aristulatus]
gi|406685591|gb|AFS51236.1| phytochrome P, partial [Podocarpus purdieanus]
Length = 660
Score = 877 bits (2266), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/624 (67%), Positives = 499/624 (79%), Gaps = 19/624 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG IQPFGC++AV+E NF ++ YS+NA EMLDL P +VP +E +AL
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEAL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLFT S A AL+KAA +++L+NPI +H + SGKPF AI+HRIDVG+V+DLE
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSQYSGKPFNAIVHRIDVGMVVDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P D ++ AGA++S K A +AISRLQSLP+G+I LLCD +V +V +LTGYDRVMVYK
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV VIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVNVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTSPR V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSRTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+G
Sbjct: 535 RLTDLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAF 676
+LV D+V + + V+ ML A
Sbjct: 595 KSLVHDVVLEECAECVEKMLYRAL 618
>gi|406685465|gb|AFS51173.1| phytochrome P, partial [Araucaria cunninghamii]
Length = 664
Score = 877 bits (2266), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/635 (67%), Positives = 502/635 (79%), Gaps = 24/635 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD------- 118
AYL R+QRG IQPFGCM+AV+E F ++ YSENA EMLDL P +VPN++
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFLIIAYSENAVEMLDLMPQSVPNMDMDRDQAMTSH 60
Query: 119 ----ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
+T+G DVRTLFT S A L+KAA E++L+NPI +H K + KPFYAI+HRIDVG
Sbjct: 61 GGGRVMTIGTDVRTLFTPSSARLLEKAAMAHEISLMNPIWVHSKNTNKPFYAIVHRIDVG 120
Query: 175 LVIDLEPVNPD-----DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSD 229
+VIDLEPV D ++AAGA++S KLA +AISRLQSLP+G+I LLCD +V +V +
Sbjct: 121 MVIDLEPVRTGSGGGGDAALSAAGAVQSQKLAVRAISRLQSLPAGDIGLLCDTVVEDVRE 180
Query: 230 LTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICD 289
LTGYDRVMVYKFHEDEHGEV+AE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICD
Sbjct: 181 LTGYDRVMVYKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICD 240
Query: 290 CLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN 349
C A PVKVIQ ++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN EDE
Sbjct: 241 CRAAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEGGG 300
Query: 350 DQEQGR-------KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLRE 402
G KLWGLVVCHHTSPR VPFPLRYACEFL+Q FG+Q+N E++L+AQL E
Sbjct: 301 GGGSGSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTE 360
Query: 403 KHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKD 462
KHILRTQT+LCDMLLRD+P+GIVT +P++MDLVKCDGAALYY G W+LGVTPTE QIKD
Sbjct: 361 KHILRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKD 420
Query: 463 IAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEI 522
IA+WLLEYH STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+
Sbjct: 421 IADWLLEYHVDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEM 480
Query: 523 KWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDE 582
KWGGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD
Sbjct: 481 KWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDI 540
Query: 583 VAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAE 642
++K +V+ D +++ IDEL + +EMVRLIETA PILAVD++G +NGWN+K AE
Sbjct: 541 DDSNTKTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAE 600
Query: 643 LTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
LTGL V +A+G +LV DL+ +S + V ML A
Sbjct: 601 LTGLPVGEAMGKSLVHDLIFEESANTVDKMLYHAL 635
>gi|406685559|gb|AFS51220.1| phytochrome P, partial [Podocarpus costalis]
Length = 660
Score = 877 bits (2265), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/624 (67%), Positives = 498/624 (79%), Gaps = 19/624 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG IQPFGC++AV+E NF ++ YS+NA EMLDL P +VP +E + L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLFT S A AL+KAA +++L+NPI +H SGKPF AI+HRIDVG+VIDLE
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHCSGKPFNAIVHRIDVGMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P D ++ AGA++S K A +AISRLQSLP+G+I LLCD +V +V +LTGYDRVMVYK
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTS R V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILA+D++G VNGWN+K AELTGL V +A+G
Sbjct: 535 RLTDLKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAF 676
+LV D+V +S + V+ ML A
Sbjct: 595 KSLVHDVVLEESAECVEKMLYRAL 618
>gi|406685555|gb|AFS51218.1| phytochrome P, partial [Podocarpus chingianus]
Length = 660
Score = 877 bits (2265), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/624 (67%), Positives = 498/624 (79%), Gaps = 19/624 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG IQPFGC++AV+E NF ++ YS+NA EMLDL P +VP +E + L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLFT S A AL+KAA +++L+NPI +H SGKPF AI+HRIDVG+VIDLE
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHYSGKPFNAIVHRIDVGMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P D ++ AGA++S K A +AISRLQSLP+G+I LLCD +V +V +LTGYDRVMVYK
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTS R V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILA+D++G VNGWN+K AELTGL V +A+G
Sbjct: 535 RLTDLKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAF 676
+LV D+V +S + V+ ML A
Sbjct: 595 KSLVHDVVLEESAECVEKMLYRAL 618
>gi|406685481|gb|AFS51181.1| phytochrome P, partial [Araucaria schmidii]
Length = 677
Score = 876 bits (2264), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/635 (66%), Positives = 503/635 (79%), Gaps = 24/635 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD------- 118
AYL R+QRG IQPFGCM+AV+E F ++ YSENA EMLDL P +VPN++
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFLIIAYSENAVEMLDLMPQSVPNMDMDRDEAMTSH 60
Query: 119 ----ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
+T+G DVRTLFT+S A AL+KAA E++L+NPI +H K + KPFYAI+HRIDVG
Sbjct: 61 GGGRVMTIGTDVRTLFTTSSARALEKAAMAHEISLMNPIWVHSKNTNKPFYAIVHRIDVG 120
Query: 175 LVIDLEPVNPD-----DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSD 229
+V+DLEPV D ++AAGA++S KLA +AISRLQSLP+G+I LLCD +V +V +
Sbjct: 121 MVMDLEPVRTGSGGGGDAALSAAGAVQSQKLAVRAISRLQSLPAGDIGLLCDTVVEDVRE 180
Query: 230 LTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICD 289
LTGYDRVMVYKFHEDEHGEV+AE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICD
Sbjct: 181 LTGYDRVMVYKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICD 240
Query: 290 CLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN 349
C A PVKVIQ ++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN EDE
Sbjct: 241 CRAAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEGGG 300
Query: 350 DQEQGR-------KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLRE 402
G KLWGLVVCHHTSPR VPFPLRYACEFL+Q FG+Q+N E++L+AQL E
Sbjct: 301 GGGSGSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTE 360
Query: 403 KHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKD 462
KHILRTQT+LCDMLLRD+P+GIVT +P++MDLVKCDGAALYY G W+LGVTPTE QIKD
Sbjct: 361 KHILRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKD 420
Query: 463 IAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEI 522
IA+WLLEYH STGLSTDSL +AGYP A +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+
Sbjct: 421 IADWLLEYHVDSTGLSTDSLADAGYPSAASLGDAVCGMAAARITSKDFLFWFRSHTAKEM 480
Query: 523 KWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDE 582
KWGGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD
Sbjct: 481 KWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDI 540
Query: 583 VAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAE 642
++K +V+ D +++ IDEL + +EMVRLIETA PILAVD++G +NGWN+K AE
Sbjct: 541 DDSNTKTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAE 600
Query: 643 LTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
LTGL V +A+G +LV DL+ +S + + ML A
Sbjct: 601 LTGLPVGEAMGKSLVHDLIFEESANTLDKMLYHAL 635
>gi|406685457|gb|AFS51169.1| phytochrome P, partial [Araucaria bernieri]
Length = 675
Score = 876 bits (2263), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/633 (66%), Positives = 503/633 (79%), Gaps = 22/633 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD------- 118
AYL R+QRG IQPFGCM+AV+E F ++ YSENA EMLDL P +VPN++
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFLIIAYSENAVEMLDLMPQSVPNMDMDRDEAMTSH 60
Query: 119 ----ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
+T+G DVRTLFT+S A AL+KAA E++L+NPI +H K + KPFYAI+HRIDVG
Sbjct: 61 GGGRVMTIGTDVRTLFTTSSARALEKAAMAHEISLMNPIWVHSKNTNKPFYAIVHRIDVG 120
Query: 175 LVIDLEPVNPD-----DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSD 229
+V+DLEPV D ++AAGA++S KLA +AIS LQSLP+G+I LLCD +V +V +
Sbjct: 121 MVMDLEPVRTGSGGGGDAALSAAGAVQSQKLAVRAISGLQSLPAGDIGLLCDTVVEDVRE 180
Query: 230 LTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICD 289
LTGYDRVMVYKFHEDEHGEV+AE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICD
Sbjct: 181 LTGYDRVMVYKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICD 240
Query: 290 CLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN 349
C A PVKVIQ ++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN EDE
Sbjct: 241 CRAAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEGGG 300
Query: 350 DQEQGR-----KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKH 404
G KLWGLVVCHHTSPR VPFPLRYACEFL+Q FG+Q+N E++L+AQL EKH
Sbjct: 301 GGGSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKH 360
Query: 405 ILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIA 464
ILRTQT+LCDMLLRD+P+GIVT +P++MDLVKCDGAALYY G W+LGVTPTE QIKDIA
Sbjct: 361 ILRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIA 420
Query: 465 EWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKW 524
+WLLEYH STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KW
Sbjct: 421 DWLLEYHVDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKW 480
Query: 525 GGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVA 584
GGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD
Sbjct: 481 GGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDD 540
Query: 585 EDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELT 644
++K +V+ D +++ IDEL + +EMVRLIETA PILAVD++G +NGWN+K AELT
Sbjct: 541 SNTKTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAELT 600
Query: 645 GLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
GL V +A+G +LV DL+ +S + + ML A
Sbjct: 601 GLPVGEAMGKSLVHDLIFEESANTLDKMLYHAL 633
>gi|406685589|gb|AFS51235.1| phytochrome P, partial [Podocarpus polyspermus]
Length = 660
Score = 876 bits (2263), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/624 (67%), Positives = 498/624 (79%), Gaps = 19/624 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG IQPFGC++AV+E NF ++ YS+NA EMLDL P +VP +E + L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLFT S A AL+KAA +++L+NP+ +H SGKPF AI+HRIDVG+VIDLE
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPVWVHSHYSGKPFNAIVHRIDVGMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P D ++ AGA++S K A +AISRLQSLP+G+I LLCD +V +V +LTGYDRVMVYK
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTS R V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILA+D++G VNGWN+K AELTGL V +A+G
Sbjct: 535 RLTDLKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAF 676
+LV D+V +S + V+ ML A
Sbjct: 595 KSLVHDVVLEESAECVEKMLYRAL 618
>gi|406685483|gb|AFS51182.1| phytochrome P, partial [Araucaria subulata]
Length = 662
Score = 876 bits (2263), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/633 (66%), Positives = 503/633 (79%), Gaps = 22/633 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD------- 118
AYL R+QRG IQPFGCM+AV+E F ++ YSENA EMLDL P +VPN++
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFLIIAYSENAVEMLDLMPQSVPNMDMDRDEAMTSH 60
Query: 119 ----ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
+T+G DVRTLFT+S A AL+KAA E++L+NPI +H K + KPFYAI+HRIDVG
Sbjct: 61 GGGRVMTIGTDVRTLFTTSSARALEKAAMAHEISLMNPIWVHSKNTNKPFYAIVHRIDVG 120
Query: 175 LVIDLEPVNPD-----DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSD 229
+V+DLEPV D ++AAGA++S KLA +AIS LQSLP+G+I LLCD +V +V +
Sbjct: 121 MVMDLEPVRTGSGGGGDAALSAAGAVQSQKLAVRAISGLQSLPAGDIGLLCDTVVEDVRE 180
Query: 230 LTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICD 289
LTGYDRVMVYKFHEDEHGEV+AE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICD
Sbjct: 181 LTGYDRVMVYKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICD 240
Query: 290 CLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN 349
C A PVKVIQ ++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN EDE
Sbjct: 241 CRAAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEGGG 300
Query: 350 DQEQGR-----KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKH 404
G KLWGLVVCHHTSPR VPFPLRYACEFL+Q FG+Q+N E++L+AQL EKH
Sbjct: 301 GGGSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKH 360
Query: 405 ILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIA 464
ILRTQT+LCDMLLRD+P+GIVT +P++MDLVKCDGAALYY G W+LGVTPTE QIKDIA
Sbjct: 361 ILRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIA 420
Query: 465 EWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKW 524
+WLLEYH STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KW
Sbjct: 421 DWLLEYHVDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKW 480
Query: 525 GGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVA 584
GGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD
Sbjct: 481 GGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDD 540
Query: 585 EDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELT 644
++K +V+ D +++ IDEL + +EMVRLIETA PILAVD++G +NGWN+K AELT
Sbjct: 541 SNTKTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAELT 600
Query: 645 GLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
GL V +A+G +LV DL+ +S + + ML A
Sbjct: 601 GLPVGEAMGKSLVHDLIFEESANTLDKMLYHAL 633
>gi|406685463|gb|AFS51172.1| phytochrome P, partial [Araucaria columnaris]
Length = 677
Score = 875 bits (2262), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/635 (66%), Positives = 503/635 (79%), Gaps = 24/635 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD------- 118
AYL R+QRG IQPFGCM+AV+E F ++ YSENA EMLDL P +VPN++
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFLIIAYSENAVEMLDLMPQSVPNMDMDRDEAMTSH 60
Query: 119 ----ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
+T+G DVRTLFT+S A AL++AA E++L+NPI +H K + KPFYAI+HRIDVG
Sbjct: 61 GGGRVMTIGTDVRTLFTTSSARALERAAMAHEISLMNPIWVHSKNTNKPFYAIVHRIDVG 120
Query: 175 LVIDLEPVNPD-----DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSD 229
+V+DLEPV D ++AAGA++S KLA +AISRLQSLP+G+I LLCD +V +V +
Sbjct: 121 MVMDLEPVRTGSGGGGDAALSAAGAVQSQKLAVRAISRLQSLPAGDIGLLCDTVVEDVRE 180
Query: 230 LTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICD 289
LTGYDRVMVYKFHEDEHGEV+AE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICD
Sbjct: 181 LTGYDRVMVYKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICD 240
Query: 290 CLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN 349
C A PVKVIQ ++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN EDE
Sbjct: 241 CRAAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEGGG 300
Query: 350 DQEQGR-------KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLRE 402
G KLWGLVVCHHTSPR VPFPLRYACEFL+Q FG+Q+N E++L+AQL E
Sbjct: 301 GGGSGSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTE 360
Query: 403 KHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKD 462
KHILRTQT+LCDMLLRD+P+GIVT +P++MD VKCDGAALYY G W+LGVTPTE QIKD
Sbjct: 361 KHILRTQTLLCDMLLRDAPIGIVTHSPSIMDPVKCDGAALYYGGMCWMLGVTPTEAQIKD 420
Query: 463 IAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEI 522
IA+WLLEYH STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+
Sbjct: 421 IADWLLEYHVDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEM 480
Query: 523 KWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDE 582
KWGGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD
Sbjct: 481 KWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDI 540
Query: 583 VAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAE 642
++K +V+ D +++ IDEL + +EMVRLIETA PILAVD++G +NGWN+K AE
Sbjct: 541 DDSNTKTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAE 600
Query: 643 LTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
LTGL V +A+G +LV DL+ +S + V ML A
Sbjct: 601 LTGLPVGEAMGKSLVHDLIFEESANTVDKMLYHAL 635
>gi|406685563|gb|AFS51222.1| phytochrome P, partial [Podocarpus dispermus]
Length = 660
Score = 875 bits (2261), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/624 (67%), Positives = 497/624 (79%), Gaps = 19/624 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG IQPFGC++AV+E NF ++ YS+NA EMLDL P +VP +E + L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLFT S A AL+KAA +++L+NPI +H SGKPF AI+HRIDVG+VIDLE
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHYSGKPFNAIVHRIDVGMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P D ++ AGA++S K A +AISRLQSLP+G+I LLCD +V +V +LTGYDRVMVYK
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N VRMICDC A PVKVIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNGVRMICDCSATPVKVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTS R V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILA+D++G VNGWN+K AELTGL V +A+G
Sbjct: 535 RLTDLKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAF 676
+LV D+V +S + V+ ML A
Sbjct: 595 KSLVHDVVLEESAECVEKMLYRAL 618
>gi|406685619|gb|AFS51250.1| phytochrome P, partial [Retrophyllum minus]
Length = 660
Score = 875 bits (2261), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/624 (67%), Positives = 499/624 (79%), Gaps = 19/624 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG I PFGC++ V+E NF ++ YS+NA EMLDL P +VP +E + L
Sbjct: 1 AYLSRMQRGGXIXPFGCVLTVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLFT S A AL+KAA +++L+NPI +H + SGKPF AI+HRIDVG+VIDLE
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSQYSGKPFNAIVHRIDVGMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P+ D ++ AGA++S K A +AISRLQSLP+G+I LLCD +V +V +LTGYDRVMVYK
Sbjct: 121 PLRTGDTAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTSPR V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GI+TQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIMTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGATTLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+G
Sbjct: 535 RLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAF 676
+LV D+V +S + V+ ML A
Sbjct: 595 KSLVHDVVLEESAECVEKMLYRAL 618
>gi|85679505|gb|ABC72086.1| phytochrome B [Solanum tuberosum]
Length = 1130
Score = 875 bits (2261), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/691 (62%), Positives = 521/691 (75%), Gaps = 17/691 (2%)
Query: 1 MSSKSTNKTNYSRSSSARSKQNARV---------AAQTSIDAKLAEDFDESD-----FDY 46
M+S S K ++ SS A+S + V AQ + DA+L F++S FDY
Sbjct: 1 MASGSRTKHSHHNSSQAQSSGTSNVNYKDSISKAIAQYTADARLHAVFEQSGESGKFFDY 60
Query: 47 STSVNISSSTSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDL 106
S SV ++T +VP ++AYL ++QRG IQPFGCMIAVDE +F V+ YSENA EML L
Sbjct: 61 SESVK--TTTQSVPERQITAYLTKIQRGGHIQPFGCMIAVDEASFRVIAYSENAFEMLSL 118
Query: 107 APHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYA 166
P +VP++E+ + LT+G DVRTLFT S + L++A E+ LLNPI IH K SGKPFYA
Sbjct: 119 TPQSVPSLEKCEILTIGTDVRTLFTPSSSVLLERAFGAREITLLNPIWIHSKNSGKPFYA 178
Query: 167 ILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNE 226
ILHR+DVG+ IDLEP +D ++ AGA++S KLA +AIS LQSLP G+I LLCD +V
Sbjct: 179 ILHRVDVGIAIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTVVES 238
Query: 227 VSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRM 286
V +LTGYDRVMVYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRM
Sbjct: 239 VRELTGYDRVMVYKFHEDEHGEVVAESKRSDLEPYIGLHYPATDIPQASRFLFKQNRVRM 298
Query: 287 ICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDE 346
I DC A PV+V QD+ L QPL L GSTLRAPHGCHA+YM NMGSIASL ++V IN ++E
Sbjct: 299 IVDCHATPVRVTQDESLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLTLAVIINGNDEE 358
Query: 347 LDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHIL 406
+LWGLVV HHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+L
Sbjct: 359 AVGGGRNSMRLWGLVVGHHTSVRSIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHVL 418
Query: 407 RTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEW 466
RTQT+LCDMLLRDSP GIVTQ+P++MDLVKCDGAALYY+GK + LGVTPTE QIKDI EW
Sbjct: 419 RTQTLLCDMLLRDSPPGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTEAQIKDIVEW 478
Query: 467 LLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGG 526
LL YH STGLSTDSL +AGYPGA +LGDAVCG+A I+SKDFLFWFRSHTAKEIKWGG
Sbjct: 479 LLAYHGDSTGLSTDSLADAGYPGAASLGDAVCGMAVAYISSKDFLFWFRSHTAKEIKWGG 538
Query: 527 AKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAED 586
AKH KD G +MHPRSSFKAFLEVVK RS PWE+ EMDAIHSLQLILR S +D A +
Sbjct: 539 AKHHPEDKDDGLRMHPRSSFKAFLEVVKSRSSPWENAEMDAIHSLQLILRDSFKDAEASN 598
Query: 587 SKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGL 646
SK IV+ + ++ IDEL + EMVRLIETA PI AVD G +NGWN+K AELTGL
Sbjct: 599 SKAIVHAHLGEMELQGIDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAELTGL 658
Query: 647 TVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
+V++A+G +LV +LV +S + + +L +A
Sbjct: 659 SVEEAMGKSLVHELVYKESQETAEKLLYNAL 689
>gi|406685595|gb|AFS51238.1| phytochrome P, partial [Podocarpus rubens]
Length = 660
Score = 875 bits (2261), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/624 (67%), Positives = 498/624 (79%), Gaps = 19/624 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG IQPFGC++AV+E NF ++ YS+NA EMLDL P +VP +E + L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLFT S A AL+KAA +++L+NPI +H SGKPF AI+HRIDVG+VIDLE
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHYSGKPFNAIVHRIDVGMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P D ++ AGA++S K A +AISRLQSLP+G+I LLCD +V +V +LTGY+RVMVYK
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYERVMVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTS R V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILA+D++G VNGWN+K AELTGL V +A+G
Sbjct: 535 RLTDLKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAF 676
+LV D+V +S + V+ ML A
Sbjct: 595 KSLVHDVVLEESAECVEKMLYRAL 618
>gi|406685579|gb|AFS51230.1| phytochrome P, partial [Podocarpus macrophyllus]
Length = 661
Score = 875 bits (2261), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/624 (67%), Positives = 498/624 (79%), Gaps = 19/624 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG IQPFGC++AV+E NF ++ YS+NA EMLDL P +VP +E + L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLFT S A AL+KAA +++L+NPI +H SGKPF AI+HRIDVG+VIDLE
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHYSGKPFNAIVHRIDVGMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P D ++ AGA++S K A +AISRLQSLP+G+I LLCD +V +V +LTGYDRVMVYK
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVK+IQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKMIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTS R V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILA+D++G VNGWN+K AELTGL V +A+G
Sbjct: 535 RLTDLKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAF 676
+LV D+V +S + V+ ML A
Sbjct: 595 KSLVHDVVLEESAECVEKMLYRAL 618
>gi|224101559|ref|XP_002312330.1| predicted protein [Populus trichocarpa]
gi|222852150|gb|EEE89697.1| predicted protein [Populus trichocarpa]
Length = 1142
Score = 875 bits (2261), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/681 (62%), Positives = 520/681 (76%), Gaps = 13/681 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + ++ + SK AQ ++DA+L F++S FDYS SV +S +
Sbjct: 21 SSGTSNMRQHHHATESVSK----AIAQYTVDAQLHAVFEQSGGSGKSFDYSQSVRTTSQS 76
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
VP ++AYL ++QRG IQPFGCMIAVDE +F V+ YSENA EML L P +VP++++
Sbjct: 77 --VPEEQITAYLSKIQRGGHIQPFGCMIAVDEGSFRVIAYSENAKEMLGLTPQSVPSLDK 134
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L+ G DVRTLF S +A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 135 QEILSDGTDVRTLFRPSSSAMLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 194
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA ++IS+LQSLP G+I LLCD +V V +LTGYDRV
Sbjct: 195 IDLEPARTEDPALSIAGAVQSQKLAVRSISQLQSLPGGDIKLLCDTVVESVRELTGYDRV 254
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV+
Sbjct: 255 MVYKFHEDEHGEVVAENKRADLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHATPVR 314
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YM NMGSIASL M+V IN E+E + R
Sbjct: 315 VIQDEALMQPLCLVGSTLRAPHGCHAQYMANMGSIASLAMAVIINGNEEEAIGGRNSTR- 373
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 374 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHVLRTQTLLCDML 433
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H STG
Sbjct: 434 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLALHGDSTG 493
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA +LG+AVCG+A IT +DFLFWFRSHTAKEIKWGGAKH KD
Sbjct: 494 LSTDSLADAGYPGAASLGNAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDD 553
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSL WE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 554 GQRMHPRSSFKAFLEVVKSRSLLWENAEMDAIHSLQLILRDSFRDVEATNSKAVVHAQLE 613
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+VD+A+G +L
Sbjct: 614 DTELQGMDELSSVAREMVRLIETATAPIFAVDVDGCINGWNAKVAELTGLSVDKAMGKSL 673
Query: 657 V-DLVAGDSVDVVKNMLSSAF 676
V DLV + + V +L A
Sbjct: 674 VHDLVYKEYEETVDKLLHRAL 694
>gi|406685469|gb|AFS51175.1| phytochrome P, partial [Araucaria hunsteinii]
Length = 675
Score = 875 bits (2261), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/633 (66%), Positives = 501/633 (79%), Gaps = 22/633 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD------- 118
AYL R+QRG IQPFGCM+AV+E +F ++ YSENA EMLDL+P +VPN++
Sbjct: 1 AYLTRMQRGGTIQPFGCMLAVEETSFQIVAYSENAVEMLDLSPQSVPNMDMDRDEAMGSH 60
Query: 119 ----ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
+T+G DVR LFT S A AL+KAA E++++NPI +H K + KPFYAI+HRIDVG
Sbjct: 61 GGGRVITIGTDVRNLFTPSSARALEKAAMAQEISMMNPIWVHSKNTNKPFYAIVHRIDVG 120
Query: 175 LVIDLEPVNPD-----DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSD 229
+VIDLEPV D ++AAGA++S KLA +AISRLQSLP+G+I LLCD +V +V +
Sbjct: 121 MVIDLEPVRTGSGGGGDAALSAAGAVQSQKLAVRAISRLQSLPTGDIGLLCDTVVEDVRE 180
Query: 230 LTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICD 289
LTGYDRVMVYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICD
Sbjct: 181 LTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICD 240
Query: 290 CLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN 349
C A PVKV+Q +L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN EDE
Sbjct: 241 CRAAPVKVVQAGELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEGGG 300
Query: 350 DQEQGR-----KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKH 404
G KLWGLVVCHHTSPR VPFPLRYACEFL+Q FG+Q+N E++L+AQL EKH
Sbjct: 301 GGGSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKH 360
Query: 405 ILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIA 464
ILRTQT+LCDMLLRD+P+GIVT +P++MDLVKCDGAALYY G W+LGVTPTE QIKDIA
Sbjct: 361 ILRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIA 420
Query: 465 EWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKW 524
+WLLEYH STGLSTDSL +AGYPGA +LGDAVCG+A +ITSKDFLFWFRSHTAKE+KW
Sbjct: 421 DWLLEYHGDSTGLSTDSLADAGYPGAASLGDAVCGMATARITSKDFLFWFRSHTAKEMKW 480
Query: 525 GGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVA 584
GGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD
Sbjct: 481 GGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDD 540
Query: 585 EDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELT 644
++K +V+ D +++ IDEL + +EMVRLIETA PILAVD++G +NGWN+K AELT
Sbjct: 541 SNTKTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAELT 600
Query: 645 GLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
GL V +A+G +L DL+ +S + V ML A
Sbjct: 601 GLPVGEAMGKSLAHDLIFDESANTVDKMLYHAL 633
>gi|406685455|gb|AFS51168.1| phytochrome P, partial [Araucaria araucana]
Length = 675
Score = 875 bits (2261), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/633 (66%), Positives = 502/633 (79%), Gaps = 22/633 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD------- 118
AYL R+QRG IQPFGC +AV+E +F ++ YSENA E+LDL+P +VPN++
Sbjct: 1 AYLTRMQRGGTIQPFGCTLAVEETSFLIVAYSENAVELLDLSPQSVPNMDMDRDEAMGSH 60
Query: 119 ----ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
+T+G DVRTLFT S A AL+KAA E++++NPI +H K + KPFYAI+HRIDVG
Sbjct: 61 GGGRVITIGTDVRTLFTPSSARALEKAAMAQEISMMNPIWVHSKNTNKPFYAIVHRIDVG 120
Query: 175 LVIDLEPVNPD-----DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSD 229
+VIDLEPV D ++AAGA++S KLA +AISRLQSLP+G+I LLCD +V +V +
Sbjct: 121 MVIDLEPVRTGSGGGGDAALSAAGAVQSQKLAVRAISRLQSLPTGDIGLLCDTVVEDVRE 180
Query: 230 LTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICD 289
LTGYDRVMVYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICD
Sbjct: 181 LTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICD 240
Query: 290 CLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN 349
C A PVKV+Q +L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN EDE
Sbjct: 241 CRAAPVKVVQAGQLQQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEGGG 300
Query: 350 DQEQGR-----KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKH 404
G KLWGLVVCHHTSPR VPFPLRYACEFL+Q FG+Q+N E++L+AQL EKH
Sbjct: 301 GGGSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKH 360
Query: 405 ILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIA 464
ILRTQT+LCDMLLRD+P+GIVT +P++MDLVKCDGAALYY G W+LGVTPTE QIKDIA
Sbjct: 361 ILRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIA 420
Query: 465 EWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKW 524
+WLLEYH STGLSTDSL +AGYPGA +LGDAVCG+A +ITSKDFLFWFRSHTAKE+KW
Sbjct: 421 DWLLEYHGDSTGLSTDSLADAGYPGAASLGDAVCGMATARITSKDFLFWFRSHTAKEMKW 480
Query: 525 GGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVA 584
GGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD
Sbjct: 481 GGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDD 540
Query: 585 EDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELT 644
++K +V+ D +++ IDEL + +EMVRLIETA PILAVD++G +NGWN+K AELT
Sbjct: 541 SNTKTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAELT 600
Query: 645 GLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
GL V +A+G +LV DL+ +S + V ML A
Sbjct: 601 GLPVGEAMGKSLVHDLIFDESANTVDKMLCHAL 633
>gi|406685575|gb|AFS51228.1| phytochrome P, partial [Podocarpus longifoliolatus]
Length = 660
Score = 875 bits (2260), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/624 (67%), Positives = 498/624 (79%), Gaps = 19/624 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG IQPFGC++AV+E NF ++ YS+NA EMLDL P +VP +E + L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLFT S A AL+KAA +++L+NP+ +H SGKPF AI+HRIDVG+VIDLE
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPVWVHSHYSGKPFNAIVHRIDVGMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P D ++ AGA++S K A +AISRLQSLP+G+I +LCD +V +V +LTGYDRVMVYK
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGMLCDTVVEDVRELTGYDRVMVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTS R V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSSTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILA+D++G VNGWN+K AELTGL V +A+G
Sbjct: 535 RLTDLKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAF 676
+LV D+V +S + V+ ML A
Sbjct: 595 KSLVHDVVLEESAECVEKMLYRAL 618
>gi|33302622|sp|P34094.2|PHYB_SOLTU RecName: Full=Phytochrome B
gi|2326872|emb|CAA74908.1| phytochrome B [Solanum tuberosum]
Length = 1130
Score = 875 bits (2260), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/677 (63%), Positives = 516/677 (76%), Gaps = 15/677 (2%)
Query: 6 TNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDESD-----FDYSTSVNISSSTSNVP 60
T+ NY S S + AQ + DA+L F++S FDYS SV ++T +VP
Sbjct: 22 TSNVNYKDSIS-------KAIAQYTADARLHAVFEQSGESGKFFDYSQSVK--TTTQSVP 72
Query: 61 SSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDAL 120
++AYL ++QRG IQPFGCMIAVDE +F V+ YSENA EML L P +VP++E+ + L
Sbjct: 73 ERQITAYLTKIQRGGHIQPFGCMIAVDEASFRVIAYSENACEMLSLTPQSVPSLEKCEIL 132
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLFT S + L++A E+ LLNPI IH K SGKPFYAILHR+DVG+VIDLE
Sbjct: 133 TIGTDVRTLFTPSSSVLLERAFGAREITLLNPIWIHSKNSGKPFYAILHRVDVGIVIDLE 192
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P +D ++ AGA++S KLA +AIS LQSLP G+I LLCD +V V +LTGYDRVMVYK
Sbjct: 193 PARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTVVESVRELTGYDRVMVYK 252
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+V QD
Sbjct: 253 FHEDEHGEVVAESKRSDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVRVTQD 312
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGL 360
+ L QPL L GSTLRAPHGCHA+YM NMGSIASL ++V IN ++E +LWGL
Sbjct: 313 ESLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLTLAVIINGNDEEAVGGGRNSMRLWGL 372
Query: 361 VVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDS 420
VV HHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDMLLRDS
Sbjct: 373 VVGHHTSVRSIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDS 432
Query: 421 PVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTD 480
P GIVTQ+P++MDLVKCDGAALYY+GK + LGVTPTE QIKDI EWLL YH STGLSTD
Sbjct: 433 PPGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTEAQIKDIVEWLLAYHGDSTGLSTD 492
Query: 481 SLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKM 540
SL +AGYPGA +LGDAVCG+A ITSKDFLFWFRSHTAKEIKWGGAKH KD G++M
Sbjct: 493 SLPDAGYPGAASLGDAVCGMAVAYITSKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRM 552
Query: 541 HPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRI 600
HPRSSFKAFLEVVK RS PWE+ EMDAIHSLQLILR S +D A +SK IV+ + +
Sbjct: 553 HPRSSFKAFLEVVKSRSSPWENAEMDAIHSLQLILRDSFKDAEASNSKAIVHAHLGEMEL 612
Query: 601 EKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DL 659
+ IDEL + EMVRLIETA PI AVD G +NGWN+K AELTG++V++A+G +LV DL
Sbjct: 613 QGIDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAELTGVSVEEAMGKSLVHDL 672
Query: 660 VAGDSVDVVKNMLSSAF 676
V +S + + +L +A
Sbjct: 673 VYKESQETAEKLLYNAL 689
>gi|406685605|gb|AFS51243.1| phytochrome P, partial [Podocarpus spinulosus]
Length = 660
Score = 875 bits (2260), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/624 (67%), Positives = 498/624 (79%), Gaps = 19/624 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG IQPFGC++AV+E NF ++ YS+NA EMLDL P +VP +E + L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLFT S A AL+KAA +++L+NPI +H SGKPF AI+HRIDVG+VIDLE
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHYSGKPFNAIVHRIDVGVVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P D ++ AGA++S K A +AISRLQSLP+G+I LLCD +V +V +LTGYDRVMVYK
Sbjct: 121 PRGSGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTS R V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W +GVTPTE QIKDIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCVGVTPTEAQIKDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILA+D++G VNGWN+K AELTGL V +A+G
Sbjct: 535 RLTDLKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAF 676
+LV D+V +S + V+ ML A
Sbjct: 595 KSLVHDVVLEESAECVEKMLYRAL 618
>gi|406685611|gb|AFS51246.1| phytochrome P, partial [Prumnopitys andina]
Length = 661
Score = 875 bits (2260), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/625 (67%), Positives = 503/625 (80%), Gaps = 20/625 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD------A 119
AYL R+QRG IQPFGC +AV+E F ++ YS+NA EMLDL P +VPN++
Sbjct: 1 AYLSRMQRGGTIQPFGCTLAVEETGFKIIAYSQNALEMLDLMPQSVPNMDLGKPGGGGAV 60
Query: 120 LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDL 179
L +G DVRTLFT + A AL+KAA E++L+NPI +H + +GKPFYAI+HRIDVG+VIDL
Sbjct: 61 LAIGTDVRTLFTPASARALEKAAMGREISLMNPIWVHSQYTGKPFYAIVHRIDVGIVIDL 120
Query: 180 EPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVY 239
EPV D ++AAGA++S KLA +AISRLQSLP+G++ LLCD +V +V +LTGYDRVMVY
Sbjct: 121 EPVRTGDAAMSAAGAVQSQKLAVRAISRLQSLPAGDVGLLCDTVVEDVRELTGYDRVMVY 180
Query: 240 KFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQ 299
KFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N++RMICDC A PVKV+Q
Sbjct: 181 KFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRMRMICDCSAAPVKVVQ 240
Query: 300 DKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG----- 354
++L QPL L GSTLRAPHGCHA+YM NMGS+ASLVM+V IN ND+E G
Sbjct: 241 SEELRQPLCLVGSTLRAPHGCHAQYMANMGSVASLVMAVIIN------GNDEEGGGTSGR 294
Query: 355 --RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
KLWGLVVCHHTSPR VPF LRYACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+L
Sbjct: 295 ISMKLWGLVVCHHTSPRAVPFSLRYACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLL 354
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIA+WLLEYH
Sbjct: 355 CDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIADWLLEYHG 414
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AG+PGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 DSTGLSTDSLADAGHPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPD 474
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVN 592
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD ++K +V+
Sbjct: 475 DKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSNTKTMVH 534
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +++ IDEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+
Sbjct: 535 ARLNDMKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAM 594
Query: 653 GTALV-DLVAGDSVDVVKNMLSSAF 676
G +LV DLV +S + V+ ML A
Sbjct: 595 GKSLVQDLVFEESHESVEKMLYRAL 619
>gi|406685459|gb|AFS51170.1| phytochrome P, partial [Araucaria bidwillii]
Length = 662
Score = 875 bits (2260), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/633 (66%), Positives = 501/633 (79%), Gaps = 22/633 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD------- 118
AYL R+QRG IQPFGCM+AV+E +F ++ YSENA EMLDL+P +VPN++
Sbjct: 1 AYLTRMQRGGTIQPFGCMLAVEETSFQIVAYSENAVEMLDLSPQSVPNMDMDRDEAMGSH 60
Query: 119 ----ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
+T+G DVR LFT S A AL+KAA E++++NPI +H K + KPFYAI+HRIDVG
Sbjct: 61 GGGRVITIGTDVRNLFTPSSARALEKAAMAQEISMMNPIWVHSKNTNKPFYAIVHRIDVG 120
Query: 175 LVIDLEPVNPD-----DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSD 229
+VIDLEPV D ++AAGA++S KLA +AISRLQSLP+G+I LLCD +V +V +
Sbjct: 121 MVIDLEPVRTGSGGGGDAALSAAGAVQSQKLAVRAISRLQSLPTGDIGLLCDTVVEDVRE 180
Query: 230 LTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICD 289
LTGYDRVMVYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICD
Sbjct: 181 LTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICD 240
Query: 290 CLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN 349
C A PVKV+Q +L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN EDE
Sbjct: 241 CRAAPVKVVQAGELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEGGG 300
Query: 350 DQEQGR-----KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKH 404
G KLWGLVVCHHTSPR VPFPLRYACEFL+Q FG+Q+N E++L+AQL EKH
Sbjct: 301 GGGSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKH 360
Query: 405 ILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIA 464
ILRTQT+LCDMLLRD+P+GIVT +P++MDLVKCDGAALYY G W+LGVTPTE QIKDIA
Sbjct: 361 ILRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIA 420
Query: 465 EWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKW 524
+WLLEYH STGLSTDSL +AGYPGA +LGDAVCG+A +ITSKDFLFWFRSHTAKE+KW
Sbjct: 421 DWLLEYHGDSTGLSTDSLADAGYPGAASLGDAVCGMATARITSKDFLFWFRSHTAKEMKW 480
Query: 525 GGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVA 584
GGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD
Sbjct: 481 GGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDD 540
Query: 585 EDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELT 644
++K +V+ D +++ IDEL + +EMVRLIETA PILAVD++G +NGWN+K AELT
Sbjct: 541 SNTKTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAELT 600
Query: 645 GLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
GL V +A+G +L DL+ +S + V ML A
Sbjct: 601 GLPVGEAMGKSLAHDLIFDESANTVDKMLYHAL 633
>gi|406685553|gb|AFS51217.1| phytochrome P, partial [Podocarpus brassii]
Length = 660
Score = 874 bits (2259), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/624 (67%), Positives = 498/624 (79%), Gaps = 19/624 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG IQPFGC++AV+E NF ++ YS+NA EMLDL P +VP +E + L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLFT S A AL+KAA +++L+NPI +H SGKPF AI+HRIDVG+VIDLE
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHYSGKPFNAIVHRIDVGMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P D ++ AGA++S K A +AISRLQSLP+G+I LLCD +V +V +LTGY+RVMVYK
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYERVMVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTS R V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +A YPGA LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADASYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILA+D++G VNGWN+K AELTGL V +A+G
Sbjct: 535 RLTDLKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAF 676
+LV D+V +SV+ V+ ML A
Sbjct: 595 KSLVHDVVLEESVECVEKMLYRAL 618
>gi|406685645|gb|AFS51263.1| phytochrome P, partial [Picea glauca]
Length = 584
Score = 874 bits (2258), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/583 (70%), Positives = 486/583 (83%), Gaps = 2/583 (0%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQ--DALTLG 123
AYL R+QRG IQPFGC++AV+E F ++ YSENA EMLDLAP +VP++EQ + LT+G
Sbjct: 1 AYLSRIQRGGRIQPFGCVLAVEETTFRIIAYSENAVEMLDLAPQSVPSMEQPQLEVLTIG 60
Query: 124 IDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVN 183
DVRTLFT++ A +L+KAA E++L+NPI +HCK S KPFYAI+HRIDVG+VID EP+
Sbjct: 61 TDVRTLFTAASAHSLEKAAVAQEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDFEPLK 120
Query: 184 PDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHE 243
D V+AAGA++S KLA +AISRLQSLP G+I LLCD +V V +LTGYDRVMVYKFHE
Sbjct: 121 TGDAFVSAAGAVQSQKLAVRAISRLQSLPCGDIELLCDSVVENVRELTGYDRVMVYKFHE 180
Query: 244 DEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKL 303
DEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC+A PV+VIQ ++L
Sbjct: 181 DEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVQVIQSEEL 240
Query: 304 DQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVC 363
QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN +DE KLWGLVVC
Sbjct: 241 MQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIINGNDDEGAGSGRNSMKLWGLVVC 300
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HHTSPR VPFPLRYACEF++Q FG+Q+N E++L+AQL EKHILRTQT+LCDMLLRD+P+G
Sbjct: 301 HHTSPRAVPFPLRYACEFMMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRDAPIG 360
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IVTQ+P++MDLVKCDGAALYY G W+LGVTPTE QIKDIA+WLLE+H STGLSTDSL
Sbjct: 361 IVTQSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTDSLA 420
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
+AGYPGA +LGDAVCG+A+ +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPR
Sbjct: 421 DAGYPGAASLGDAVCGMASARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPR 480
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKI 603
SSFKAFLEVVK+RSLPW++VE+DAIHSLQLILRGS QD +K +V+ D R++ I
Sbjct: 481 SSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDIDDSGTKTMVHSRLNDLRLQGI 540
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGL 646
DEL + +EMVRLIETA PILAVD +G VNGWN+K AELTGL
Sbjct: 541 DELSSVASEMVRLIETATAPILAVDYNGLVNGWNAKVAELTGL 583
>gi|406685601|gb|AFS51241.1| phytochrome P, partial [Podocarpus salomonensis]
Length = 660
Score = 874 bits (2257), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/624 (67%), Positives = 496/624 (79%), Gaps = 19/624 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG IQPFGC++AV+E NF ++ YS+NA EMLDL P +VP +E + L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
++G DVRTLFT S A AL+KA +++L+NPI +H SGKPF AI+HRIDVG+VIDLE
Sbjct: 61 SIGTDVRTLFTPSSARALEKAVMAPDISLMNPIWVHSHYSGKPFNAIVHRIDVGMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P D ++ AGA++S K A +AISRLQSLP+G+I LLCD +V +V +LTGYDRVMVYK
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTS R V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTAWCLGVTPTEAQIKDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKELKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDGSGTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILA+D++G VNGWN+K AELTGL V +A+G
Sbjct: 535 RLTDLKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAF 676
+LV D+V +S V+ ML A
Sbjct: 595 KSLVHDVVLEESAGCVEKMLYRAL 618
>gi|406685547|gb|AFS51214.1| phytochrome P, partial [Podocarpus archboldii]
Length = 660
Score = 874 bits (2257), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/624 (67%), Positives = 497/624 (79%), Gaps = 19/624 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG IQPFGC++AV+E NF ++ YS+NA EMLDL P +VP +E + L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLFT S A AL+KAA +++L+NPI +H SGKPF AI+HRIDVG+VIDLE
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHYSGKPFNAIVHRIDVGMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P D ++ AGA++S K A +AISRLQSLP+G+I LLCD +V +V +LTGY+RVMVYK
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYERVMVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTS R V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLS DSL +AGYPGA LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSADSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILA+D++G VNGWN+K AELTGL V +A+G
Sbjct: 535 RLTDLKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAF 676
+LV D+V +S + V+ ML A
Sbjct: 595 KSLVHDVVLEESAECVEKMLYRAL 618
>gi|363547893|gb|AEW26986.1| phytochrome P [Ginkgo biloba]
Length = 590
Score = 874 bits (2257), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/601 (70%), Positives = 493/601 (82%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+ V++ F ++ YSENA EMLDL P++VP++E++ L +G DVRTLFT S A
Sbjct: 2 IQPFGCMLTVEDITFRIIAYSENAVEMLDLIPNSVPSMEEE-VLAIGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +HCK SGKPFYAI+HRIDVG+VID EPV D ++AAGA++
Sbjct: 61 SLEKAAAAKEISLMNPIWMHCKHSGKPFYAIVHRIDVGMVIDFEPVG--DASLSAAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQS+P G+ISLLCD +V +V DLTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSIPGGDISLLCDTVVEDVRDLTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQD++L QPL L GSTLR
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCCATPVKVIQDEELRQPLCLVGSTLRX 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVIINGT-----------MKLWGLVVCHHTSPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+ +N E++L AQL EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLXLNMELQLGAQLXEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLEYH STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLEYHADSTGLSTDSLADAGYPGAPSLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD D+K +V+ D +++ IDEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSDTKTMVHARLNDLKLQGIDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +SV+ V+ +L A
Sbjct: 528 IETATAPILAVDSGGLVNGWNAKVAELTGLPVGEAMGKSLVHDLVFEESVETVEKLLYHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|406685617|gb|AFS51249.1| phytochrome P, partial [Retrophyllum comptonii]
Length = 661
Score = 873 bits (2256), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/624 (67%), Positives = 498/624 (79%), Gaps = 19/624 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG IQPFGC++ V+E NF ++ YS+NA EMLDL P +VP +E + L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLTVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLFT S A AL+KAA +++L+NPI +H + SGKPF AI+HRIDVG+VIDLE
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSQYSGKPFNAIVHRIDVGMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P+ D ++ AGA++S K A +AISRLQSLP+ +I LLCD +V +V +LTGYDRVMVYK
Sbjct: 121 PLRTGDTAMSTAGAVQSQKFAVRAISRLQSLPTCDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTSPR V FP+RYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSPRAVSFPMRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W L VTPTE QIKDIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLAVTPTEAQIKDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGATTLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+G
Sbjct: 535 RLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAF 676
+LV D+V +S + V+ ML A
Sbjct: 595 KSLVHDVVLEESAECVEKMLYRAL 618
>gi|406685569|gb|AFS51225.1| phytochrome P, partial [Podocarpus fasciculus]
Length = 660
Score = 873 bits (2256), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/624 (67%), Positives = 497/624 (79%), Gaps = 19/624 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG IQPFGC++AV+E NF ++ YS+NA EMLDL P +VP +E + L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLFT S A AL+KAA +++L+NPI +H SGKPF AI+HRIDVG+VIDLE
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHYSGKPFNAIVHRIDVGMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P D ++ AGA++S K A +AISRLQSLP+G+I LLCD +V +V +LTGYDRVMVYK
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVK+IQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKMIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTS R V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILA+D++G VNGWN+K AELTGL V +A+G
Sbjct: 535 RLTDLKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAF 676
+LV D+V +S + V+ L A
Sbjct: 595 KSLVHDVVLEESAECVEKTLYRAL 618
>gi|2370331|emb|CAA74992.1| phytochrome B [Nicotiana plumbaginifolia]
Length = 1135
Score = 873 bits (2256), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/677 (62%), Positives = 517/677 (76%), Gaps = 15/677 (2%)
Query: 6 TNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVP 60
T+ NY S S + AQ + DA+L F++S FDYS SV +++ S VP
Sbjct: 27 TSNVNYKDSIS-------KAIAQYTADARLHAVFEQSGESGKSFDYSQSVK-TTTQSVVP 78
Query: 61 SSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDAL 120
++AYL ++QRG IQPFGCMIAVDE +F V+ YSENA EML L P +VP++E+ + L
Sbjct: 79 EQQITAYLTKIQRGGHIQPFGCMIAVDEASFGVIAYSENACEMLSLTPQSVPSLERPEIL 138
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLFT S + L++A E+ LLNPI IH K SGKPFYAILHR+DVG+VIDLE
Sbjct: 139 TVGTDVRTLFTPSSSVLLERAFGAREITLLNPIWIHSKNSGKPFYAILHRVDVGIVIDLE 198
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P +D ++ AGA++S KLA +AIS LQSLP G++ +LCD +V V +LTGYDRVMVYK
Sbjct: 199 PAKTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDVKILCDTVVESVRELTGYDRVMVYK 258
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE +RPDLEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+V+QD
Sbjct: 259 FHEDEHGEVVAESKRPDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVRVVQD 318
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGL 360
+ L QPL L GSTLRAPHGCHA+YM NMGSIASL ++V IN ++E + R LWGL
Sbjct: 319 ESLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLTLAVIINGNDEEAVGGRSSMR-LWGL 377
Query: 361 VVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDS 420
VV HHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDMLLRDS
Sbjct: 378 VVGHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDS 437
Query: 421 PVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTD 480
P GIVTQ+P++MDLVKCDGAALY +GK + LGVTPTE QIKDI EWLL YH STGLSTD
Sbjct: 438 PTGIVTQSPSIMDLVKCDGAALYCQGKYYPLGVTPTEAQIKDIVEWLLTYHGDSTGLSTD 497
Query: 481 SLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKM 540
SL +AGYPGA LGDAVCG+A ITSKDFLFWFRSHTAKEIKWGGAKH KD G++M
Sbjct: 498 SLADAGYPGAALLGDAVCGMAVAYITSKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRM 557
Query: 541 HPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRI 600
HPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +S +V+ + +
Sbjct: 558 HPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFKDAEASNSMAVVHAQLGEMEL 617
Query: 601 EKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DL 659
+ IDEL + EMVRLIETA PI AVD G +NGWN+K AELT L+V++A+G +LV DL
Sbjct: 618 QGIDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTDLSVEEAMGKSLVHDL 677
Query: 660 VAGDSVDVVKNMLSSAF 676
V +S + +N+L +A
Sbjct: 678 VHEESQETAENLLFNAL 694
>gi|406685577|gb|AFS51229.1| phytochrome P, partial [Podocarpus lucienii]
Length = 660
Score = 873 bits (2255), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/624 (67%), Positives = 497/624 (79%), Gaps = 19/624 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG IQPFGC++AV+E NF ++ YS+NA EMLDL P +VP +E + L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLFT S A AL+KAA +++L+NPI +H SGKPF AI+HRIDVG+VIDLE
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHYSGKPFNAIVHRIDVGMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P D ++ AGA++S K A +AISRLQSLP+G+I LLCD +V +V +LTGYDRVMVYK
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVK+IQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKMIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTS R V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA LGDAVCG+AA +ITSK FLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGAATLGDAVCGMAAARITSKGFLFWFRSHTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILA+D++G VNGWN+K AELTGL V +A+G
Sbjct: 535 RLTDLKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAF 676
+LV D+V +S + V+ ML A
Sbjct: 595 KSLVHDVVLEESAECVEKMLYRAL 618
>gi|406685531|gb|AFS51206.1| phytochrome P, partial [Nageia formosensis]
Length = 660
Score = 873 bits (2255), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/624 (67%), Positives = 496/624 (79%), Gaps = 19/624 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG IQPFGC++AV+E NF ++ YS+NA EMLDL P +VP +E + L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
TLG DVRTLFT S A AL+KAA +++L+NPI ++ + SGKPF AI+HRIDVG+VIDLE
Sbjct: 61 TLGTDVRTLFTPSSARALEKAAMAPDISLMNPICVYSQYSGKPFNAIVHRIDVGMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P+ D ++ AGA++S K A +AISRLQSLP+G+I LLCD +V +V +LTGYDRVMVYK
Sbjct: 121 PLRTGDTAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV VIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGSHYPATDIPQASRFLFMQNRVRMICDCSATPVTVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTSPR V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDI EWLLEYH
Sbjct: 355 DMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIVEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RS PWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSSPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D + + IDEL + EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+G
Sbjct: 535 RLNDLKYQGIDELSSVATEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAF 676
+LV D+V DS + V+ ML A
Sbjct: 595 KSLVHDVVLEDSAECVEKMLYRAL 618
>gi|406685565|gb|AFS51223.1| phytochrome P, partial [Podocarpus drouynianus]
Length = 660
Score = 873 bits (2255), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/624 (67%), Positives = 497/624 (79%), Gaps = 19/624 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG IQPFGC++AV+E NF ++ YS+NA EMLDL P +VP +E + L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLFT S A AL+KAA +++L+NPI +H SGKPF AI+HRIDVG+VIDLE
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHYSGKPFNAIVHRIDVGMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P D ++ AGA++S K A +AISRLQSLP+G+I LLCD +V +V +LTGYDRVMV+K
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVFK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLV CHHTS R V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LC
Sbjct: 295 SMKLWGLVGCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+G
Sbjct: 535 RLTDLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAF 676
+LV D+V +S + V+ ML A
Sbjct: 595 KSLVHDVVLEESAECVEKMLYRAL 618
>gi|406685499|gb|AFS51190.1| phytochrome P, partial [Dacrycarpus cinctus]
gi|406685501|gb|AFS51191.1| phytochrome P, partial [Dacrycarpus kinabaluensis]
Length = 660
Score = 872 bits (2254), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/624 (67%), Positives = 499/624 (79%), Gaps = 19/624 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG +QPFGCM+AV+E NF ++ YS+NA EMLDL P +VP++E + L
Sbjct: 1 AYLSRMQRGGTLQPFGCMLAVEETNFKIIAYSQNALEMLDLMPQSVPSMELGKRGGGEVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLFT S AL+KAA +++L+NPI +H + SGKPF AI+HRIDV +VIDLE
Sbjct: 61 TIGTDVRTLFTPSSGRALEKAAMAPDISLMNPIWVHSQYSGKPFNAIVHRIDVAMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P+ D ++ AGA++S KLA +AISRLQSLP+G+I LLCD +V +V +LTGYDRVM Y+
Sbjct: 121 PLRTGDAAMSTAGAVQSQKLAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMAYR 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGS+ASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSVASLVMAVVIN------GNDEEGGGTSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTSPR V FPLRYACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILAVD++G VNGWN+K AELT L V +A+G
Sbjct: 535 RLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTDLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAF 676
+LV D+V +S + V ML A
Sbjct: 595 KSLVHDIVLEESAECVDKMLYRAL 618
>gi|406685583|gb|AFS51232.1| phytochrome P, partial [Podocarpus neriifolius]
Length = 660
Score = 872 bits (2254), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/624 (67%), Positives = 497/624 (79%), Gaps = 19/624 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG IQPFGC++AV+E NF ++ YS+NA EMLDL P +VP +E + L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLFT S A AL+KAA +++L+NPI +H SGKPF AI+HRIDVG+VIDLE
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHYSGKPFNAIVHRIDVGMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P ++ AGA++S K A +AISRLQSLP+G+I LLCD +V +V +LTGY+RVMVYK
Sbjct: 121 PRRTGGAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYERVMVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTS R V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILA+D++G VNGWN+K AELTGL V +A+G
Sbjct: 535 RLTDLKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAF 676
+LV D+V +S + V+ ML A
Sbjct: 595 KSLVHDVVLEESAECVEKMLYRAL 618
>gi|406685571|gb|AFS51226.1| phytochrome P, partial [Podocarpus guatemalensis]
Length = 660
Score = 872 bits (2254), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/624 (67%), Positives = 497/624 (79%), Gaps = 19/624 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG IQPFGC++AV+E NF ++ YS+NA EML L P +VP +E +AL
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLGLMPQSVPTMELGKHGGGEAL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLFT S A AL+KAA +++L+NPI +H + SGKPF AI+HRIDVG+V+ LE
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSQYSGKPFNAIVHRIDVGMVVGLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P D ++ AGA++S K A +AISRLQSLP+G+I LLCD +V +V +LTGYDRVMVYK
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV VIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVNVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTSPR V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSRTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+G
Sbjct: 535 RLTDLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAF 676
+LV D+V + + V+ ML A
Sbjct: 595 KSLVHDVVLEECAECVEKMLYRAL 618
>gi|406685593|gb|AFS51237.1| phytochrome P, partial [Podocarpus ramosii]
Length = 660
Score = 872 bits (2254), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/624 (67%), Positives = 497/624 (79%), Gaps = 19/624 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG IQPFGC++AV+E NF ++ YS+NA EMLDL P +VP +E + L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLFT S A AL+KAA +++L+NPI +H SGKPF AI+HRIDVG+VIDLE
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHYSGKPFNAIVHRIDVGMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P D ++ AGA++S K A +AISRLQSLP+G+I LLCD +V +V +LTGY+RVMVYK
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYERVMVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWG VVCHHTS R V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LC
Sbjct: 295 SMKLWGSVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILA+D++G VNGWN+K AELTGL V +A+G
Sbjct: 535 RLTDLKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAF 676
+LV D+V +S + V+ ML A
Sbjct: 595 KSLVHDVVLEESAECVEKMLYRAL 618
>gi|406685551|gb|AFS51216.1| phytochrome P, partial [Podocarpus bracteatus]
Length = 660
Score = 872 bits (2253), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/624 (67%), Positives = 496/624 (79%), Gaps = 19/624 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG IQPFGC++AV+E NF ++ YS+NA EMLDL P +VP +E + L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLFT S A AL+KAA +++L+NPI +H SGKPF AI+HRIDVG+VIDLE
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHYSGKPFNAIVHRIDVGMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P D ++ AGA++S K A +AISRLQSLP+G+I LLCD +V +V +LTGY+RVMVYK
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYERVMVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A P KVIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPAKVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTS R V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W LG TPTE QIKDIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGATPTEAQIKDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILA+D++G VNGWN+K AELTGL V +A+G
Sbjct: 535 RLTDLKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAF 676
+LV D+V +S + V+ ML A
Sbjct: 595 KSLVHDVVLEESAECVEKMLYRAL 618
>gi|10954091|gb|AAG25725.1|AF309806_1 phytochrome B1 [Populus trichocarpa]
Length = 1151
Score = 872 bits (2253), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/681 (62%), Positives = 520/681 (76%), Gaps = 13/681 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + ++ + SK AQ ++DA+L F++S FDYS SV +S +
Sbjct: 21 SSGTSNMRQHHHATESVSK----AIAQYTVDAQLHAVFEQSGGSGKSFDYSQSVRTTSQS 76
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
VP ++AYL ++QRG IQPFGCMIAVDE +F V+ YSENA EML L P +VP++++
Sbjct: 77 --VPEEQITAYLSKIQRGGHIQPFGCMIAVDEGSFRVIAYSENAKEMLGLTPQSVPSLDK 134
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L+ G DVRTLF S +A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 135 QEILSDGTDVRTLFRPSSSAMLEKAFGAREIILLNPIWIHSKNSGKPFYAILHRIDVGIV 194
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA ++IS+LQSLP G+I LLCD +V V +LTGYDRV
Sbjct: 195 IDLEPARTEDPALSIAGAVQSQKLAVRSISQLQSLPGGDIKLLCDTVVESVRELTGYDRV 254
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV+
Sbjct: 255 MVYKFHEDEHGEVVAENKRADLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHATPVR 314
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YM NMGSIASL M+V IN E+E + R
Sbjct: 315 VIQDEALMQPLCLVGSTLRAPHGCHAQYMANMGSIASLAMAVIINGNEEEAIGGRNSTR- 373
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 374 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHVLRTQTLLCDML 433
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H STG
Sbjct: 434 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLALHGDSTG 493
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA +LG+AVCG+A IT +DFLFWFRSHTAKEIKWGGAKH KD
Sbjct: 494 LSTDSLADAGYPGAASLGNAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDD 553
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSL WE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 554 GQRMHPRSSFKAFLEVVKSRSLLWENAEMDAIHSLQLILRDSFRDVEATNSKAVVHAQLE 613
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+VD+A+G +L
Sbjct: 614 DTELQGMDELSSVAREMVRLIETATAPIFAVDVDGCINGWNAKVAELTGLSVDKAMGKSL 673
Query: 657 V-DLVAGDSVDVVKNMLSSAF 676
V DLV + + V +L A
Sbjct: 674 VHDLVYKEYEETVDKLLHRAL 694
>gi|406685603|gb|AFS51242.1| phytochrome P, partial [Podocarpus spathoides]
Length = 660
Score = 872 bits (2253), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/624 (67%), Positives = 497/624 (79%), Gaps = 19/624 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R++RG IQPFGC++AV+E NF ++ YS+NA EMLDL P +VP +E + L
Sbjct: 1 AYLSRMRRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
++G DVRTLFT S A AL+KA +++L+NPI +H SGKPF AI+HRIDVG+VIDLE
Sbjct: 61 SIGTDVRTLFTPSSARALEKAVMAPDISLMNPIWVHSHYSGKPFNAIVHRIDVGMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P D ++ AGA++S K A +AISRLQSLP+G+I LLCD +V +V +LTGYDRVMVYK
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ
Sbjct: 181 FHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTS R V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKELKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILA+D++G VNGWN+K AELTGL V +A+G
Sbjct: 535 RLTDLKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAF 676
+LV D+V +S + V+ ML A
Sbjct: 595 KSLVHDVVLEESAECVEKMLYRAL 618
>gi|406685503|gb|AFS51192.1| phytochrome P, partial [Dacrycarpus compactus]
Length = 661
Score = 872 bits (2252), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/624 (67%), Positives = 499/624 (79%), Gaps = 19/624 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG +QPFGCM+AV+E NF ++ YS+NA EMLDL P +VP++E + L
Sbjct: 1 AYLSRMQRGGTLQPFGCMVAVEETNFKIIAYSQNALEMLDLMPQSVPSMELGKRGGGEVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLFT S AL+KAA +++L+NPI +H + SGKPF AI+HRIDV +VIDLE
Sbjct: 61 TIGTDVRTLFTPSSGRALEKAAMAPDISLMNPIWVHSQYSGKPFNAIVHRIDVAMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P+ D ++ AGA++S KLA +AISRLQSLP+G+I LLCD +V +V +LTGYDRVM Y+
Sbjct: 121 PLRTGDAAMSTAGAVQSQKLAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMAYR 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHG+VVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ
Sbjct: 181 FHEDEHGDVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGS+ASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSVASLVMAVVIN------GNDEEGGGTSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTSPR V FPLRYACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILAVD++G VNGWN+K AELT L V +A+G
Sbjct: 535 RLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTDLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAF 676
+LV D+V +S + V ML A
Sbjct: 595 KSLVHDIVLEESAECVDKMLYRAL 618
>gi|406685497|gb|AFS51189.1| phytochrome P, partial [Afrocarpus usambarensis]
Length = 660
Score = 872 bits (2252), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/624 (67%), Positives = 497/624 (79%), Gaps = 19/624 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG IQPFGC++ V+E NF ++ YS+NA EMLDL P +VP +E + L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLTVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLF A AL+KAA +++L+NPI +H + SGKPF AI+HRIDVG+VIDLE
Sbjct: 61 TIGTDVRTLFKPFSARALEKAAMAPDISLMNPICVHSQYSGKPFNAIVHRIDVGMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P+ D ++ AGA++S K A +AISRLQSLP+G+I LLCD +V +V +LTGYDRVMVYK
Sbjct: 121 PLRTGDTAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTSPR V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W L VTPTE QIKDIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLEVTPTEAQIKDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+G
Sbjct: 535 RLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAF 676
+LV D+V +S + V+ ML A
Sbjct: 595 KSLVHDVVLEESAECVEKMLYRAL 618
>gi|406685529|gb|AFS51205.1| phytochrome P, partial [Pherosphaera fitzgeraldii]
Length = 660
Score = 872 bits (2252), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/624 (67%), Positives = 500/624 (80%), Gaps = 19/624 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQ-----DAL 120
AYL R+QRG IQPFGCM+ V+E NF ++ YS+NA EMLDL P +VP+++ + L
Sbjct: 1 AYLSRMQRGGTIQPFGCMLTVEETNFKIIAYSQNALEMLDLMPQSVPSMDSKLGAGGAVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVR+LFT S + AL+KA +++L+NPI IH + +GKPF AI+HRIDVG+VIDLE
Sbjct: 61 TIGTDVRSLFTPSSSRALEKAFMAPDISLMNPIWIHSQYTGKPFNAIVHRIDVGMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P+ D ++ AGA++S KLA +AISRLQSLP+G+I LLCD +V +V +LTGYDRVMVYK
Sbjct: 121 PLRTGDAAMSTAGAVQSQKLAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASL M+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMSNMGSIASLAMAVVIN------GNDEEGGGTGGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTSPR V FPLRYACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GIVTQ+P++MDLVKCDGAALYY W LGVTP+E QIKDIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGATTWCLGVTPSEAQIKDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA +LGDAVCG+AA +ITS+DFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGAASLGDAVCGMAAARITSRDFLFWFRSHTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD D+K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSDTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+
Sbjct: 535 RLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMS 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAF 676
+LV DLV +S + V+ ML A
Sbjct: 595 KSLVHDLVLEESAESVEKMLYRAL 618
>gi|406685491|gb|AFS51186.1| phytochrome P, partial [Afrocarpus falcatus]
Length = 647
Score = 872 bits (2252), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/624 (67%), Positives = 497/624 (79%), Gaps = 19/624 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG IQPFGC++ V+E NF ++ YS+NA EMLDL P +VP +E + L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLTVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLF A AL+KAA +++L+NPI +H + SGKPF AI+HRIDVG+VIDLE
Sbjct: 61 TIGTDVRTLFKPFSALALEKAAMAPDISLMNPICVHSQYSGKPFNAIVHRIDVGMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P+ D ++ AGA++S K A +AISRLQSLP+G+I LLCD +V +V +LTGYDRVMVYK
Sbjct: 121 PLRTGDTAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTSPR V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W L VTPTE QIKDIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLEVTPTEAQIKDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+G
Sbjct: 535 RLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAF 676
+LV D+V +S + V+ ML A
Sbjct: 595 KSLVHDVVLEESAECVEKMLYRAL 618
>gi|406685505|gb|AFS51193.1| phytochrome P, partial [Dacrycarpus imbricatus]
Length = 661
Score = 871 bits (2250), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/624 (67%), Positives = 499/624 (79%), Gaps = 19/624 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG +QPFGCM+AV+E NF ++ YS+NA EMLDL P +VP++E + L
Sbjct: 1 AYLSRMQRGGTLQPFGCMLAVEETNFKIIAYSQNALEMLDLMPQSVPSMELGKRGGGEVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLFT S AL+KAA +++L+NPI +H + SGKPF AI+HRIDV +VIDLE
Sbjct: 61 TIGTDVRTLFTPSSGRALEKAAMAPDISLMNPIWVHSQYSGKPFNAIVHRIDVAMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P+ D ++ AGA++S KLA +AISRLQSLP+G+I LLCD +V +V +LTGYDRVM Y+
Sbjct: 121 PLRTGDAAMSTAGAVQSQKLAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMAYR 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGS+ASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSVASLVMAVVIN------GNDEEGGGTSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTSPR V FPLRYACEFL+Q FG+Q+N +++L+AQ+ EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMQLQLAAQMTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILAVD++G VNGWN+K AELT L V +A+G
Sbjct: 535 RLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTDLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAF 676
+LV D+V +S + V ML A
Sbjct: 595 KSLVHDIVLEESAECVDKMLYRAL 618
>gi|406685495|gb|AFS51188.1| phytochrome P, partial [Afrocarpus mannii]
Length = 660
Score = 871 bits (2250), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/624 (67%), Positives = 497/624 (79%), Gaps = 19/624 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG IQPFGC++ V+E NF ++ YS+NA EMLDL P +VP +E + L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLTVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLF A AL+KAA +++L+NPI +H + SGKPF AI+HRIDVG+VIDLE
Sbjct: 61 TIGTDVRTLFKPFSARALEKAAMAPDISLMNPICVHSQYSGKPFNAIVHRIDVGMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P+ D ++ AGA++S K A +AISRLQSLP+G+I LLCD +V +V +LTGYDRVMVYK
Sbjct: 121 PLRTGDTAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTSPR V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W L VTPTE QI+DIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLEVTPTEAQIRDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+G
Sbjct: 535 RLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAF 676
+LV D+V +S + V+ ML A
Sbjct: 595 KSLVHDVVLEESAECVEKMLYRAL 618
>gi|406685587|gb|AFS51234.1| phytochrome P, partial [Podocarpus oleifolius]
Length = 660
Score = 871 bits (2250), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/620 (67%), Positives = 497/620 (80%), Gaps = 11/620 (1%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG IQPFGC++AV+E NF ++ YS+NA EMLDL P +VP +E + L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVRTLFT S A AL+KAA +++L+NPI +H SGKPF AI+HRIDVG+VIDLE
Sbjct: 61 TIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHYSGKPFNAIVHRIDVGMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P D ++ AGA++S K A +AISRLQSLP+G+I LLCD +V +V +LTGYDRVMVYK
Sbjct: 121 PRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVK+IQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLSMQNRVRMICDCSATPVKMIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR---KL 357
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN D+ + GR KL
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVING--DDEEGGGTSGRSSMKL 298
Query: 358 WGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLL 417
WGLVVCHHTS R V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LCDMLL
Sbjct: 299 WGLVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLL 358
Query: 418 RDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGL 477
RD+P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIAEWLLEYH STGL
Sbjct: 359 RDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGL 418
Query: 478 STDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGG 537
STDSL +AGYPGA LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD G
Sbjct: 419 STDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDG 478
Query: 538 RKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVD 597
R+M PRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+ D
Sbjct: 479 RRMRPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHARLTD 538
Query: 598 DRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV 657
+++ IDEL + +EMVRLIETA PILA+D++G VNGWN+K AELTGL V +A+G +LV
Sbjct: 539 LKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGEAMGKSLV 598
Query: 658 -DLVAGDSVDVVKNMLSSAF 676
D+V +S + V+ ML A
Sbjct: 599 HDVVLEESAECVEKMLYRAL 618
>gi|327342194|gb|AEA50884.1| phyB1 [Populus tremula]
Length = 695
Score = 870 bits (2248), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/681 (62%), Positives = 517/681 (75%), Gaps = 13/681 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + ++ + SK AQ ++DA+L F++S FDYS SV +S +
Sbjct: 21 SSGTSNMRQHHHATESVSK----AIAQYTVDAQLHAVFEQSGGSGKSFDYSQSVRTTSQS 76
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
VP ++AYL ++QRG IQPFGCMIAVDE +F V+ YSENA EML P +VP++++
Sbjct: 77 --VPEEQITAYLSKIQRGGHIQPFGCMIAVDEGSFRVIAYSENAKEMLGFTPQSVPSLDK 134
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L+ G DVRTLF S +A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 135 QEILSDGTDVRTLFRPSSSAMLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 194
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA ++IS+LQSLP G+I LLCD +V V +LTGYDRV
Sbjct: 195 IDLEPARTEDPALSIAGAVQSQKLAVRSISQLQSLPGGDIKLLCDTVVESVRELTGYDRV 254
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV+
Sbjct: 255 MVYKFHEDEHGEVVAENKRADLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHATPVR 314
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YM NMGSIAS+ M+V IN E+E + R
Sbjct: 315 VIQDEALMQPLCLVGSTLRAPHGCHAQYMANMGSIASMAMAVIINGNEEEAIGGRNSTR- 373
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 374 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHVLRTQTLLCDML 433
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + GVTPTE QIKDI EWLL H STG
Sbjct: 434 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPSGVTPTEAQIKDIVEWLLALHGDSTG 493
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA +LG+AVCG+A IT +DFLFWFRSHTAKEIKWGGAKH KD
Sbjct: 494 LSTDSLADAGYPGAASLGNAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDD 553
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSL WE+ EMDAIHSLQLILR S +D A +SK +V
Sbjct: 554 GQRMHPRSSFKAFLEVVKSRSLLWENAEMDAIHSLQLILRDSFRDAEATNSKAVVRTQLE 613
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 614 DTELQGMDELSSVAREMVRLIETATAPIFAVDVDGCINGWNAKVAELTGLSVERAMGKSL 673
Query: 657 V-DLVAGDSVDVVKNMLSSAF 676
V DLV + + V +L A
Sbjct: 674 VHDLVYKEYEETVDKLLHRAL 694
>gi|406685493|gb|AFS51187.1| phytochrome P, partial [Afrocarpus gracilior]
Length = 660
Score = 870 bits (2247), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/624 (67%), Positives = 496/624 (79%), Gaps = 19/624 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG IQPFGC++ V+E NF ++ YS+NA EMLDL P +VP +E + L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLTVEETNFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
T+G DVR LF A AL+KAA +++L+NPI +H + SGKPF AI+HRIDVG+VIDLE
Sbjct: 61 TIGTDVRILFKPFSARALEKAAMAPDISLMNPICVHSQYSGKPFNAIVHRIDVGMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P+ D ++ AGA++S K A +AISRLQSLP+G+I LLCD +V +V +LTGYDRVMVYK
Sbjct: 121 PLRTGDTAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTSPR V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W L VTPTE QIKDIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLEVTPTEAQIKDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +++ IDEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+G
Sbjct: 535 RLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAF 676
+LV D+V +S + V+ ML A
Sbjct: 595 KSLVHDVVLEESAECVEKMLYRAL 618
>gi|406685521|gb|AFS51201.1| phytochrome P, partial [Lepidothamnus fonkii]
Length = 661
Score = 870 bits (2247), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/624 (67%), Positives = 500/624 (80%), Gaps = 20/624 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDA------ 119
AYL R+QRG IQPFGCM+AV++ NF ++ YSENA EMLD+ P +VPN++ +
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEDTNFKIIAYSENALEMLDIMPQSVPNMDLGKSGGGGAV 60
Query: 120 LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDL 179
LT+G DVRTLFT + A AL+KA+ E++L+NPI +H + +GKPFYAI+H IDVG+VIDL
Sbjct: 61 LTIGADVRTLFTPASARALEKASMAQEISLMNPIWMHSQYTGKPFYAIVHGIDVGIVIDL 120
Query: 180 EPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVY 239
EP D ++AAGA++S KL+ +A SRLQSLP+G+I LLCD +V +V +LTGYDRVMVY
Sbjct: 121 EPAKTGDAAMSAAGAVQSQKLSVRASSRLQSLPAGDIGLLCDTVVEDVRELTGYDRVMVY 180
Query: 240 KFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQ 299
KFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ
Sbjct: 181 KFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKVIQ 240
Query: 300 DKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG----- 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 SQELMQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGPSGR 294
Query: 355 --RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
KLWGLVVCHHTSPR VPFPLRY CEFL+Q FG+Q+N E++L+AQL EKHILRTQT+L
Sbjct: 295 SSMKLWGLVVCHHTSPRAVPFPLRYGCEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLL 354
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIA+WLLEYH
Sbjct: 355 CDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIADWLLEYHG 414
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AGYPGA +LGDAVCG+AA +ITS DFLFWFRSHTAKE+KWGGAKH
Sbjct: 415 DSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSNDFLFWFRSHTAKEMKWGGAKHHPD 474
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVN 592
KD R+MHPRSSFKAFLEVVK+RSLP E+VEMDAIHSLQLILRGS QD ++K +V+
Sbjct: 475 DKDDVRRMHPRSSFKAFLEVVKRRSLPRENVEMDAIHSLQLILRGSFQDIEDSNTKTMVH 534
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +++ IDEL + EMVRLIETA PILAVD+ G VNGWN+K AELTGL V +A+
Sbjct: 535 ARLNDLKLQGIDELSSVATEMVRLIETATAPILAVDSEGLVNGWNAKVAELTGLPVGEAM 594
Query: 653 GTALV-DLVAGDSVDVVKNMLSSA 675
G +LV DLV +S + V+ ML+ A
Sbjct: 595 GKSLVHDLVCEESAECVEKMLNRA 618
>gi|258677127|gb|ACV87354.1| phytochrome B [Aquilegia formosa]
Length = 1132
Score = 869 bits (2246), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/659 (62%), Positives = 512/659 (77%), Gaps = 8/659 (1%)
Query: 24 RVAAQTSIDAKLAEDFDESD-----FDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLIQ 78
+ AQ ++DA+L F++S FDYS S+ S+++ ++P ++AYL R+QRG IQ
Sbjct: 35 KAIAQFTVDARLHAVFEQSGESGKPFDYSQSIR-STTSQSIPEQQITAYLSRIQRGGHIQ 93
Query: 79 PFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAAL 138
PFGCMI+VDE +F V+ +SENA EMLDL P +VP +++ L +G DVRTLFT S L
Sbjct: 94 PFGCMISVDESSFRVIAFSENATEMLDLTPQSVPTLDKPQLLDVGTDVRTLFTQSSVGLL 153
Query: 139 QKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSY 198
+KA + E+ LLNP+ IH K SGKPFYAILH+IDVG+VIDLEP +D ++ AGA++S
Sbjct: 154 EKAFSAREITLLNPVWIHSKNSGKPFYAILHKIDVGIVIDLEPARTEDPALSIAGAVQSQ 213
Query: 199 KLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDL 258
K+A +AISRLQSLP G+I++LCD +V V DLTGYDRVMVYKFH+DEHGEVVAE +R DL
Sbjct: 214 KIAVRAISRLQSLPGGDINILCDTVVENVRDLTGYDRVMVYKFHDDEHGEVVAESKRSDL 273
Query: 259 EPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPH 318
EP++G HYPATDIPQASRFL +N+VRMI DC A PV VIQD+ L QPL L GSTLRAPH
Sbjct: 274 EPFIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVHVIQDEALMQPLCLVGSTLRAPH 333
Query: 319 GCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYA 378
GCHA+YM NMGSIASL ++V IN DE KLWGLVVCHHTS R +PFPLR+A
Sbjct: 334 GCHAQYMANMGSIASLALAVVIN-GNDEEGTSGRNPMKLWGLVVCHHTSARCIPFPLRHA 392
Query: 379 CEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCD 438
CEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDMLLRDSP GIVTQ+P++MDLVKCD
Sbjct: 393 CEFLMQAFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCD 452
Query: 439 GAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVC 498
G+ALYY+GK + +GVTPTE Q+KDI +WL YH STG+STDSL +AGYPGA +LGDAV
Sbjct: 453 GSALYYKGKFYPIGVTPTEAQMKDIVDWLWAYHGDSTGVSTDSLADAGYPGAASLGDAVR 512
Query: 499 GIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSL 558
G+A ITS+DFLFWFRS+TAKEIKWGGAKH KD G +MHPRSSFKAFLEVVK RSL
Sbjct: 513 GMAVAYITSRDFLFWFRSNTAKEIKWGGAKHHPEDKDDGHRMHPRSSFKAFLEVVKSRSL 572
Query: 559 PWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIE 618
PWE+ EMDAIHSLQLILR S +D +SK ++ P D ++ +DEL + EMVRLIE
Sbjct: 573 PWENAEMDAIHSLQLILRDSFRDAEGSNSKPLITSPPGDLELQGVDELSSVAREMVRLIE 632
Query: 619 TAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
TA PI AVD+ G +NGWN+K AELTGL+V +A+G +LV DLV +SV+VV N+L AF
Sbjct: 633 TATAPIFAVDSDGRINGWNAKIAELTGLSVGEAMGKSLVHDLVFKESVEVVDNLLKHAF 691
>gi|224108734|ref|XP_002314949.1| phytochrome B2 [Populus trichocarpa]
gi|10954093|gb|AAG25726.1|AF309807_1 phytochrome B2 [Populus trichocarpa]
gi|222863989|gb|EEF01120.1| phytochrome B2 [Populus trichocarpa]
Length = 1146
Score = 869 bits (2246), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/680 (62%), Positives = 517/680 (76%), Gaps = 14/680 (2%)
Query: 7 NKTNYSRSSSARSKQNA-----RVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
N+ S +S+ R +A + AQ ++DA+L F++S FDYS SV ++
Sbjct: 15 NQAQSSGTSNMRQHHHATESVSKAIAQYTVDAQLHAVFEQSGGTGRSFDYSKSVR--TTN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEQQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV+
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVR 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEALMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTETQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHTQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSA 675
V DLV + ++V ++ A
Sbjct: 672 VHDLVYKEYEEIVDKLIHRA 691
>gi|340007755|gb|AEK26584.1| phytochrome B1 [Populus tremula]
Length = 1128
Score = 868 bits (2244), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/681 (62%), Positives = 517/681 (75%), Gaps = 13/681 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + ++ + SK AQ ++DA+L F++S FDYS SV +S +
Sbjct: 21 SSGTSNMRQHHHATESVSK----AIAQYTVDAQLHAVFEQSGGSGKSFDYSQSVRTTSQS 76
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
VP ++AYL ++QRG IQPFGCMIAVDE +F V+ YSENA EML P +VP++++
Sbjct: 77 --VPEEQITAYLSKIQRGGHIQPFGCMIAVDEGSFRVIAYSENAKEMLGFTPQSVPSLDK 134
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L+ G DVRTLF S +A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 135 QEILSDGTDVRTLFRPSSSAMLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 194
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA ++IS+LQSLP G+I LLCD +V V +LTGYDRV
Sbjct: 195 IDLEPARTEDPALSIAGAVQSQKLAVRSISQLQSLPGGDIKLLCDTVVESVRELTGYDRV 254
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV+
Sbjct: 255 MVYKFHEDEHGEVVAENKRADLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHATPVR 314
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YM NMGSIAS+ M+V IN E+E + R
Sbjct: 315 VIQDEALMQPLCLVGSTLRAPHGCHAQYMANMGSIASMAMAVIINGNEEEAIGGRNSTR- 373
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 374 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHVLRTQTLLCDML 433
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + GVTPTE QIKDI EWLL H STG
Sbjct: 434 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPSGVTPTEAQIKDIVEWLLALHGDSTG 493
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA +LG+AVCG+A IT +DFLFWFRSHTAKEIKWGGAKH KD
Sbjct: 494 LSTDSLADAGYPGAASLGNAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDD 553
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSL WE+ EMDAIHSLQLILR S +D A +SK +V
Sbjct: 554 GQRMHPRSSFKAFLEVVKSRSLLWENAEMDAIHSLQLILRDSFRDAEATNSKAVVRTQLE 613
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 614 DTELQGMDELSSVAREMVRLIETATAPIFAVDVDGCINGWNAKVAELTGLSVERAMGKSL 673
Query: 657 V-DLVAGDSVDVVKNMLSSAF 676
V DLV + + V +L A
Sbjct: 674 VHDLVYKEYEETVDKLLHRAL 694
>gi|406685535|gb|AFS51208.1| phytochrome P, partial [Nageia wallichiana]
Length = 660
Score = 868 bits (2244), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/624 (67%), Positives = 495/624 (79%), Gaps = 19/624 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-----QQDAL 120
AYL R+QRG IQPFGC++AV+E NF ++ YS+NA EMLDL P +VP +E + L
Sbjct: 1 AYLSRMQRGGTIQPFGCVLAVEEANFKIIAYSQNALEMLDLMPQSVPTMELGKHGGGEVL 60
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
TLG DVRTLFT S A AL+KAA +++L+NPI +H + S KPF AI+HRIDVG+VIDLE
Sbjct: 61 TLGTDVRTLFTPSSARALEKAAMAPDISLMNPICVHSQYSRKPFNAIVHRIDVGMVIDLE 120
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P+ D ++ AGA++S K A +AISRLQSLP+G+I LLCD +V +V +LTGYDRVMVYK
Sbjct: 121 PLRTGDTAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYK 180
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV VIQ
Sbjct: 181 FHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVTVIQS 240
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG------ 354
++L QPL L GSTL APHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 241 EELRQPLCLVGSTLGAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTSGRS 294
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
KLWGLVVCHHTSPR V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LC
Sbjct: 295 SMKLWGLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLC 354
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DMLLRD+P+GIVTQ+P++ DLVKCDGAALYY G W LGVTPTE QIKDIAEWLLEYH
Sbjct: 355 DMLLRDAPIGIVTQSPSITDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEYHGD 414
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AGYPGA LGDAVCG+AA +ITSKDFLFWFRS+TAKE+KWGGAKH
Sbjct: 415 STGLSTDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSNTAKEMKWGGAKHHPDD 474
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNV 593
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+
Sbjct: 475 KDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTMVHA 534
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D + + IDEL + EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+G
Sbjct: 535 RLNDLKYQGIDELSSVATEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMG 594
Query: 654 TALV-DLVAGDSVDVVKNMLSSAF 676
+LV D+V DS + V+ ML A
Sbjct: 595 KSLVHDVVLEDSAECVEKMLYRAL 618
>gi|406685517|gb|AFS51199.1| phytochrome P, partial [Halocarpus bidwillii]
Length = 584
Score = 868 bits (2243), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/584 (70%), Positives = 484/584 (82%), Gaps = 3/584 (0%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE--QQDALTLG 123
AYL R+QRG IQPFGCM+AV+E F ++ YS+NA EMLD+ +VPN++ + LT+G
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFKIIAYSQNALEMLDIMSQSVPNMDLGKPGTLTIG 60
Query: 124 IDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVN 183
DVRTLFT + A AL+KA+ E++L+NPI +H + SGKPFYAI+HRIDVG+VIDLEPV
Sbjct: 61 TDVRTLFTPASARALEKASMAQEISLMNPIWVHSQYSGKPFYAIVHRIDVGMVIDLEPVR 120
Query: 184 PDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHE 243
D ++AAGA++S KLA +AISRLQSLP+G+I LLCD +V +V LTGYDRVMVYKFHE
Sbjct: 121 TGDAAMSAAGAVQSQKLAVRAISRLQSLPAGDIGLLCDTVVEDVRQLTGYDRVMVYKFHE 180
Query: 244 DEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKL 303
DEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ ++L
Sbjct: 181 DEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVQVIQSEEL 240
Query: 304 DQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-KLWGLVV 362
QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ++E KLWGLVV
Sbjct: 241 RQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNDEEGGGKSGGSSMKLWGLVV 300
Query: 363 CHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPV 422
CHHTSPR VPFPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LCDMLLRD+P+
Sbjct: 301 CHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRDAPI 360
Query: 423 GIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSL 482
GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIA+WLLEYH STGLSTDSL
Sbjct: 361 GIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIADWLLEYHGDSTGLSTDSL 420
Query: 483 VEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHP 542
+AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHP
Sbjct: 421 ADAGYPGATSLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHP 480
Query: 543 RSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEK 602
RSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD ++K +V+ D +++
Sbjct: 481 RSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSNTKTMVHARLNDLKLQG 540
Query: 603 IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGL 646
IDEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL
Sbjct: 541 IDELSCVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGL 584
>gi|190586161|gb|ACE79197.1| phytochrome A-3 [Glycine max]
Length = 1122
Score = 868 bits (2243), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/662 (62%), Positives = 518/662 (78%), Gaps = 10/662 (1%)
Query: 27 AQTSIDAKLAEDFDESDFDYSTSVNISSSTS----NVPSS--TVSAYLQRVQRGRLIQPF 80
AQ ++DAK+ F+ES + S ++ S + N P S +AYL +QRG++IQPF
Sbjct: 23 AQATVDAKIHATFEESGSSFDYSSSVRVSGTADGVNQPRSDKVTTAYLNHMQRGKIIQPF 82
Query: 81 GCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQK 140
GC++A+DE+ V+ YSENAPEML + HAVP++ AL +G D++TLFT+ A+ALQK
Sbjct: 83 GCLLAIDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHPALGIGTDIKTLFTAPSASALQK 142
Query: 141 AANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKL 200
A F EV LLNP+LIHCKTSGKPFYAI+HR+ ++ID EPV P +VP+TAAGAL+SYKL
Sbjct: 143 ALGFAEVLLLNPVLIHCKTSGKPFYAIIHRVTGSMIIDFEPVKPYEVPMTAAGALQSYKL 202
Query: 201 AAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEP 260
AAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM YKFHED+HGEV+AE +P LEP
Sbjct: 203 AAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVIAEITKPGLEP 262
Query: 261 YLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGC 320
YLG HYPATDIPQASRFL MKNKVRMI DC A V+V+QD+KL L+LCGSTLRAPH C
Sbjct: 263 YLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVRVLQDEKLPFDLTLCGSTLRAPHSC 322
Query: 321 HARYMENMGSIASLVMSVTINEAEDELDND--QEQGRK-LWGLVVCHHTSPRFVPFPLRY 377
HA+YM NM SIASLVM+V +N+ E++ D D Q Q RK LWGLVVCH+T+PRFVPFPLRY
Sbjct: 323 HAQYMANMDSIASLVMAVVVNDNEEDGDTDAIQPQKRKRLWGLVVCHNTTPRFVPFPLRY 382
Query: 378 ACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKC 437
ACEFL QVF + VNKE+EL Q+ EK+ILRTQT+LCD+++RD+P+GIV+++PN+MDLVKC
Sbjct: 383 ACEFLAQVFAIHVNKEIELEYQIIEKNILRTQTLLCDLVMRDAPLGIVSESPNIMDLVKC 442
Query: 438 DGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAV 497
DGAAL Y+ K+W LGVTP+E QI++IA WL EYH STG STDSL +AG+P A +LGD V
Sbjct: 443 DGAALIYKNKVWRLGVTPSESQIREIAFWLSEYHMDSTGFSTDSLSDAGFPSAPSLGDVV 502
Query: 498 CGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRS 557
CG+AAV++T+KD +FWFRSHTA EI+WGGAKH++G KD GR+MHPRSSFK FL+VVK RS
Sbjct: 503 CGMAAVRVTAKDVVFWFRSHTAAEIRWGGAKHEAGEKDDGRRMHPRSSFKVFLDVVKARS 562
Query: 558 LPWEDVEMDAIHSLQLILRGSLQDEVAED-SKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
LPW++ E+DA+HSLQLILR + +D + D + +N D +IE + EL +T+E+VRL
Sbjct: 563 LPWKEYEIDAMHSLQLILRNAFKDTESMDLNTKAINTRLSDLKIEGMQELEAVTSEIVRL 622
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
IETA VPILAVD G VNGWN K AELTGL V +A+G L+ LV S D VK ML+ A
Sbjct: 623 IETATVPILAVDVDGLVNGWNIKIAELTGLPVGEAMGKHLLTLVEDSSTDRVKKMLNLAL 682
Query: 677 LA 678
L
Sbjct: 683 LG 684
>gi|406685259|gb|AFS51070.1| phytochrome P, partial [Sciadopitys verticillata]
Length = 642
Score = 868 bits (2242), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/602 (69%), Positives = 489/602 (81%), Gaps = 7/602 (1%)
Query: 81 GCMIAVDEQNFTVLGYSENAPEMLDLAPHAVP--NIEQQDA--LTLGIDVRTLFTSSGAA 136
GCM+AV+E +F ++ YSENA EMLDL PH VP N+E + L +G D R+LF+ S A
Sbjct: 1 GCMLAVEESSFNIIAYSENAVEMLDLMPHYVPVNNMEMEGGGVLRIGTDARSLFSPSSAR 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPD-DVPVTAAGAL 195
A++KAA E++L+NPI +HCK SGKPFYAILHRIDVGLVID EPV D ++AAG +
Sbjct: 61 AMEKAAMAQEISLMNPIWMHCKKSGKPFYAILHRIDVGLVIDFEPVRTGGDASLSAAGGV 120
Query: 196 KSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRR 255
+S KLA +AISRLQSLP+G+I LLCD +V +V +LTGYDRVMVYKFHEDEHGEVV+E RR
Sbjct: 121 QSQKLAVRAISRLQSLPAGDIGLLCDTVVEDVRELTGYDRVMVYKFHEDEHGEVVSEIRR 180
Query: 256 PDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLR 315
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKV+Q ++L QPL L GSTLR
Sbjct: 181 SDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCCATPVKVVQAEELKQPLCLVGSTLR 240
Query: 316 APHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPL 375
APHGCHA+YM NMGSIASLVM+V IN DE KLWGLVVCHHTSPR VPFPL
Sbjct: 241 APHGCHAQYMANMGSIASLVMAVIIN-GNDEEGASGRSSMKLWGLVVCHHTSPRAVPFPL 299
Query: 376 RYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLV 435
RYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLV
Sbjct: 300 RYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLV 359
Query: 436 KCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGD 495
KCDGAALYY G WLLGVTPTE QIKDIA WLLEYH STGLSTDSL +AGYPGA +LGD
Sbjct: 360 KCDGAALYYGGMFWLLGVTPTEAQIKDIAHWLLEYHGDSTGLSTDSLADAGYPGAASLGD 419
Query: 496 AVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQ 555
AVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+
Sbjct: 420 AVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKR 479
Query: 556 RSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVR 615
RSLPWE+VEMDAIHSLQLILRGS QD D+K +V+ D +++ IDEL + +EMVR
Sbjct: 480 RSLPWENVEMDAIHSLQLILRGSFQDIDDSDTKTMVHARLNDLKLQGIDELSSVASEMVR 539
Query: 616 LIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSS 674
LIETA PILAVD+SG +NGWN+K AELTGL V +A+G +LV DLV +S + + ML
Sbjct: 540 LIETATAPILAVDSSGLINGWNAKVAELTGLPVREAMGKSLVHDLVFEESAEAAEKMLYH 599
Query: 675 AF 676
A
Sbjct: 600 AL 601
>gi|371940254|dbj|BAL45564.1| Phytochrome A2 [Glycine soja]
Length = 1123
Score = 867 bits (2241), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/662 (62%), Positives = 517/662 (78%), Gaps = 10/662 (1%)
Query: 27 AQTSIDAKLAEDFDESDFDYSTS--VNISSSTSNVPS----STVSAYLQRVQRGRLIQPF 80
A ++DAKL F+ES + S V IS + V +AYL +Q+G++IQPF
Sbjct: 24 ALATVDAKLHATFEESGSSFDYSSSVRISGTADGVNQPRHDKVTTAYLHHMQKGKMIQPF 83
Query: 81 GCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQK 140
GC++A+DE+ V+ YSENAPEML + HAVP++ AL +G D++TLFT+ A+ALQK
Sbjct: 84 GCLLALDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHPALGIGTDIKTLFTAPSASALQK 143
Query: 141 AANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKL 200
A F EV+LLNP+LIHCKTSGKPFYAI+HR+ ++ID EPV P +VP+TAAGAL+SYKL
Sbjct: 144 ALGFAEVSLLNPVLIHCKTSGKPFYAIIHRVTGSMIIDFEPVKPYEVPMTAAGALQSYKL 203
Query: 201 AAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEP 260
AAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM YKFHED+HGEV+AE +P LEP
Sbjct: 204 AAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVIAEITKPGLEP 263
Query: 261 YLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGC 320
YLG HYPATDIPQASRFL MKNKVRMI DC A V+V+QD+KL L+LCGSTLRAPH C
Sbjct: 264 YLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVRVLQDEKLPFDLTLCGSTLRAPHSC 323
Query: 321 HARYMENMGSIASLVMSVTINEAEDELDND--QEQGRK-LWGLVVCHHTSPRFVPFPLRY 377
HA+YM NM SIASLVM+V +N+ E++ D D Q Q RK LWGLVVCH+T+PRFVPFPLRY
Sbjct: 324 HAQYMANMDSIASLVMAVVVNDNEEDGDTDAIQPQKRKRLWGLVVCHNTTPRFVPFPLRY 383
Query: 378 ACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKC 437
ACEFL QVF + VNKE+EL Q+ EK+ILRTQT+LCD+++RD+P+GIV+++PN+MDLVKC
Sbjct: 384 ACEFLAQVFAIHVNKEIELEYQIIEKNILRTQTLLCDLVMRDAPLGIVSESPNIMDLVKC 443
Query: 438 DGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAV 497
DGAAL Y+ K+W LGVTP+E QI++IA WL EYH STG STDSL +AG+P AL+LGD V
Sbjct: 444 DGAALIYKNKVWRLGVTPSESQIREIAFWLSEYHMDSTGFSTDSLSDAGFPSALSLGDVV 503
Query: 498 CGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRS 557
CG+AAV++T+KD +FWFRSHTA EI+WGGAKH++G KD GR+MHPRSSFK FL+VVK RS
Sbjct: 504 CGMAAVRVTAKDVVFWFRSHTAAEIRWGGAKHEAGEKDDGRRMHPRSSFKVFLDVVKARS 563
Query: 558 LPWEDVEMDAIHSLQLILRGSLQDEVAED-SKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
LPW++ E+DA+HSLQLILR + +D + D + +N D +IE + EL +T+E+VRL
Sbjct: 564 LPWKEYEIDAMHSLQLILRNAFKDTESMDLNTKAINTRLSDLKIEGMQELEAVTSEIVRL 623
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
IETA VPILAVD G VNGWN K AELTGL V +A+G L+ LV S D VK ML+ A
Sbjct: 624 IETATVPILAVDVDGLVNGWNIKIAELTGLPVGEAMGKHLLTLVEDSSTDRVKKMLNLAL 683
Query: 677 LA 678
L
Sbjct: 684 LG 685
>gi|371940244|dbj|BAL45559.1| Phytochrome A2 [Glycine soja]
gi|371940246|dbj|BAL45560.1| Phytochrome A2 [Glycine soja]
gi|371940248|dbj|BAL45561.1| Phytochrome A2 [Glycine soja]
gi|371940250|dbj|BAL45562.1| Phytochrome A2 [Glycine soja]
gi|371940252|dbj|BAL45563.1| Phytochrome A2 [Glycine soja]
gi|371940256|dbj|BAL45565.1| Phytochrome A2 [Glycine soja]
gi|371940258|dbj|BAL45566.1| Phytochrome A2 [Glycine soja]
gi|371940262|dbj|BAL45568.1| Phytochrome A2 [Glycine soja]
Length = 1123
Score = 867 bits (2240), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/662 (62%), Positives = 517/662 (78%), Gaps = 10/662 (1%)
Query: 27 AQTSIDAKLAEDFDESDFDYSTS--VNISSSTSNVPS----STVSAYLQRVQRGRLIQPF 80
A ++DAKL F+ES + S V IS + V +AYL +Q+G++IQPF
Sbjct: 24 ALATVDAKLHATFEESGSSFDYSSSVRISGTADGVNQPRHDKVTTAYLHHMQKGKMIQPF 83
Query: 81 GCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQK 140
GC++A+DE+ V+ YSENAPEML + HAVP++ AL +G D++TLFT+ A+ALQK
Sbjct: 84 GCLLALDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHPALGIGTDIKTLFTAPSASALQK 143
Query: 141 AANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKL 200
A F EV+LLNP+LIHCKTSGKPFYAI+HR+ ++ID EPV P +VP+TAAGAL+SYKL
Sbjct: 144 ALGFAEVSLLNPVLIHCKTSGKPFYAIIHRVTGSMIIDFEPVKPYEVPMTAAGALQSYKL 203
Query: 201 AAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEP 260
AAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM YKFHED+HGEV+AE +P LEP
Sbjct: 204 AAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVIAEITKPGLEP 263
Query: 261 YLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGC 320
YLG HYPATDIPQASRFL MKNKVRMI DC A V+V+QD+KL L+LCGSTLRAPH C
Sbjct: 264 YLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVRVLQDEKLPFDLTLCGSTLRAPHSC 323
Query: 321 HARYMENMGSIASLVMSVTINEAEDELDND--QEQGRK-LWGLVVCHHTSPRFVPFPLRY 377
HA+YM NM SIASLVM+V +N+ E++ D D Q Q RK LWGLVVCH+T+PRFVPFPLRY
Sbjct: 324 HAQYMANMDSIASLVMAVVVNDNEEDGDTDAIQPQKRKRLWGLVVCHNTTPRFVPFPLRY 383
Query: 378 ACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKC 437
ACEFL QVF + VNKE+EL Q+ EK+ILRTQT+LCD+++RD+P+GIV+++PN+MDLVKC
Sbjct: 384 ACEFLAQVFAIHVNKEIELEYQIIEKNILRTQTLLCDLVMRDAPLGIVSESPNIMDLVKC 443
Query: 438 DGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAV 497
DGAAL Y+ K+W LGVTP+E QI++IA WL EYH STG STDSL +AG+P AL+LGD V
Sbjct: 444 DGAALIYKNKVWRLGVTPSESQIREIAFWLSEYHMDSTGFSTDSLSDAGFPSALSLGDVV 503
Query: 498 CGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRS 557
CG+AAV++T+KD +FWFRSHTA EI+WGGAKH++G KD GR+MHPRSSFK FL+VVK RS
Sbjct: 504 CGMAAVRVTAKDVVFWFRSHTAAEIRWGGAKHEAGEKDDGRRMHPRSSFKVFLDVVKARS 563
Query: 558 LPWEDVEMDAIHSLQLILRGSLQDEVAED-SKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
LPW++ E+DA+HSLQLILR + +D + D + +N D +IE + EL +T+E+VRL
Sbjct: 564 LPWKEYEIDAMHSLQLILRNAFKDTESMDLNTKAINTRLSDLKIEGMQELEAVTSEIVRL 623
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
IETA VPILAVD G VNGWN K AELTGL V +A+G L+ LV S D VK ML+ A
Sbjct: 624 IETATVPILAVDVDGLVNGWNIKIAELTGLPVGEAMGKHLLTLVEDSSTDRVKKMLNLAL 683
Query: 677 LA 678
L
Sbjct: 684 LG 685
>gi|1730565|sp|P55141.1|PHYA_PETCR RecName: Full=Phytochrome A
gi|556667|emb|CAA53165.1| phytochrome A [Petroselinum crispum]
Length = 1129
Score = 867 bits (2239), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/678 (61%), Positives = 522/678 (76%), Gaps = 20/678 (2%)
Query: 17 ARSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSS---TSNVPSSTVS-AYLQR 70
R+ QNARV T++DAK+ DF+ES FDYS+SV ++S+ S++ S+ ++ AYL
Sbjct: 14 GRANQNARVVL-TTLDAKIHADFEESGNSFDYSSSVRVTSAVGENSSIQSNKLTTAYLHH 72
Query: 71 VQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLF 130
+Q+G+LIQP GC++AVDE++F ++ YSENAPEML + HAVP++ + L +G DVRT+F
Sbjct: 73 IQKGKLIQPVGCLLAVDEKSFKIMAYSENAPEMLTMVSHAVPSVGEHPVLGIGTDVRTIF 132
Query: 131 TSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVT 190
T+ AAALQKA F ++NLLNPIL+HCKTSGKPFYAI HR+ L+ID EPV P +VP+T
Sbjct: 133 TAPSAAALQKAVGFTDINLLNPILVHCKTSGKPFYAIAHRVTGSLIIDFEPVKPYEVPMT 192
Query: 191 AAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVV 250
AAGAL+SYKLA+KA++RLQ+LP G++ LCD +V EV +LTGYDRVM YKFH+D+HGEV
Sbjct: 193 AAGALQSYKLASKAVNRLQALPGGSMERLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVT 252
Query: 251 AECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLC 310
AE +P LEPY G HYPATD+PQA+RFL +KNKVRMICDC A V+QD+KL L+LC
Sbjct: 253 AEVTKPGLEPYFGLHYPATDVPQAARFLFLKNKVRMICDCRANSAPVLQDEKLPFELTLC 312
Query: 311 GSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDEL---DNDQEQGRKLWGLVVCHHTS 367
GSTLRAPH CH +YMENM SIASLVM+V IN++++ + D + + +KLWGLVVCH+TS
Sbjct: 313 GSTLRAPHSCHLQYMENMNSIASLVMAVVINDSDEVVESSDRNSVKSKKLWGLVVCHNTS 372
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PRFVPFPLRYACEFL QVF + V+KE+EL Q+ EK+ILRTQT+LCD+L+RD+P+GIV+Q
Sbjct: 373 PRFVPFPLRYACEFLAQVFAIHVSKELELENQIVEKNILRTQTLLCDLLMRDAPLGIVSQ 432
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+PN+MDLVKCDGAAL Y+ K++ LG TP++ Q++DI WL EYH STGLSTDSL +AGY
Sbjct: 433 SPNMMDLVKCDGAALLYKNKVYRLGATPSDYQLRDIVSWLTEYHTDSTGLSTDSLYDAGY 492
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGALALGD VCG+A VKITS D LFWFRSH A I+WGGAK + GRKMHPRSSFK
Sbjct: 493 PGALALGDVVCGMAVVKITSHDMLFWFRSHAAGHIRWGGAKAEPDENHDGRKMHPRSSFK 552
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQ---------DEVAEDSKMIVNVPSVDD 598
AFLEVVK RS W++ EMDAIHSLQLILR +L DE+ ++ +++ D
Sbjct: 553 AFLEVVKTRSTTWKEFEMDAIHSLQLILRKALSVEKAVAAQGDEIRSNTD-VIHTKLNDL 611
Query: 599 RIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVD 658
+IE I EL +T+EMVRLIETA VPI AVDA VNGWN+K AELTGL VDQA+G L+
Sbjct: 612 KIEGIQELEAVTSEMVRLIETATVPIFAVDADEIVNGWNTKIAELTGLPVDQAMGKHLLT 671
Query: 659 LVAGDSVDVVKNMLSSAF 676
LV SV V +L+ A
Sbjct: 672 LVEDSSVGTVVFLLALAL 689
>gi|59798480|sp|Q9ZS62.1|PHYB1_SOLLC RecName: Full=Phytochrome B1
gi|4038600|emb|CAA05293.1| phytochrome B1 [Solanum lycopersicum]
Length = 1131
Score = 867 bits (2239), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/696 (60%), Positives = 520/696 (74%), Gaps = 20/696 (2%)
Query: 1 MSSKSTNKTNYSRSSSARSKQN-----------ARVAAQTSIDAKLAEDFDES-----DF 44
M+S S K +Y SS +++ + ++ AQ + DA+L F++S F
Sbjct: 1 MASGSRTKHSYHNSSQGQAQSSGTSNMNYKDSISKAIAQYTADARLHAVFEQSGESGKSF 60
Query: 45 DYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEML 104
DYS SV ++T +VP ++AYL ++QRG IQPFGCMIAVDE +F ++ YSENA EML
Sbjct: 61 DYSQSVK--TTTQSVPERQITAYLTKIQRGGHIQPFGCMIAVDEASFRIIAYSENACEML 118
Query: 105 DLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPF 164
L P +VP++++ + LT+G DVRTLFT S + L++A E+ LLNPI IH K SGKPF
Sbjct: 119 SLTPQSVPSLDKSEILTVGTDVRTLFTPSSSVLLERAFGAREITLLNPIWIHSKNSGKPF 178
Query: 165 YAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLV 224
YAILHR+DVG+VIDLEP +D ++ AGA++S KLA +AIS LQSLP G+I LLCD +V
Sbjct: 179 YAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTVV 238
Query: 225 NEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKV 284
V +LTGYDRVMVYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+V
Sbjct: 239 ESVRELTGYDRVMVYKFHEDEHGEVVAESKRSDLEPYIGLHYPATDIPQASRFLFKQNRV 298
Query: 285 RMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE 344
RMI DC A PV+V QD+ L QPL L GSTLRAPHGCHA+YM NMGSIASL ++V IN +
Sbjct: 299 RMIVDCHATPVRVTQDESLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLTLAVIINGND 358
Query: 345 DELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKH 404
+E +LWGLVV HHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH
Sbjct: 359 EEAVGGGRNSMRLWGLVVGHHTSVRSIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKH 418
Query: 405 ILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIA 464
+LRTQT+LCDMLLRDSP GIVTQ+P++MDLVKCDGAALYY+ K + LGVTPTE QIKDI
Sbjct: 419 VLRTQTLLCDMLLRDSPPGIVTQSPSIMDLVKCDGAALYYQRKYYPLGVTPTEAQIKDIV 478
Query: 465 EWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKW 524
EWLL YH STGLSTDSL +AGYPGA +LGDAVCG+A ITSKDFLFWFRSHTAKEIKW
Sbjct: 479 EWLLAYHGDSTGLSTDSLADAGYPGAASLGDAVCGMAVAYITSKDFLFWFRSHTAKEIKW 538
Query: 525 GGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVA 584
GGAKH KD G++MHPRSSFKAFLEVVK RS PWE+ EMDAIHSLQLILR S +D A
Sbjct: 539 GGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSSPWENAEMDAIHSLQLILRDSFKDAEA 598
Query: 585 EDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELT 644
+SK IV+ + ++ IDEL + EMVRLIETA PI VD +G +NGWN K ELT
Sbjct: 599 SNSKAIVHALG-EMELQGIDELSSVAREMVRLIETATAPIFGVDVNGRINGWNEKVVELT 657
Query: 645 GLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAFLAI 679
GL+ ++A G +LV DL+ +S + + +L +A +
Sbjct: 658 GLSAEEAKGKSLVHDLLYKESQESAEKLLYNALRGV 693
>gi|78643930|emb|CAJ21328.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 867 bits (2239), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/680 (62%), Positives = 515/680 (75%), Gaps = 13/680 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHTQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAELTGLSVEEAVGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSA 675
V DLV + ++V ++ A
Sbjct: 672 VHDLVYKEYEEIVDKLIHRA 691
>gi|255556392|ref|XP_002519230.1| phytochrome B, putative [Ricinus communis]
gi|223541545|gb|EEF43094.1| phytochrome B, putative [Ricinus communis]
Length = 1141
Score = 866 bits (2237), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/660 (63%), Positives = 510/660 (77%), Gaps = 9/660 (1%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDYS SV ++ ++ ++AYL ++QRG I
Sbjct: 44 SKAIAQYTVDAQLHAVFEQSGGSGKSFDYSQSVR--TTNQSIAEQQITAYLSKIQRGGHI 101
Query: 78 QPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAA 137
QPFGCMIAVDE +F V+ YSENA E+L L P +VP++E+ + L++G DVRTLFT S A
Sbjct: 102 QPFGCMIAVDEASFRVIAYSENARELLGLMPQSVPSLEKPEILSIGTDVRTLFTQSSALL 161
Query: 138 LQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKS 197
L+KA E+ LLNP+ IH K SGKPFYAILHRIDVG+VIDLEP +D ++ AGA++S
Sbjct: 162 LEKAFGAREITLLNPLWIHSKNSGKPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQS 221
Query: 198 YKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPD 257
KLA +AIS+LQSLPSG++ LLCD +V V +LTGYDRVMVYKFHEDEHGEVVAE ++PD
Sbjct: 222 QKLAVRAISQLQSLPSGDVRLLCDTVVECVRELTGYDRVMVYKFHEDEHGEVVAENKQPD 281
Query: 258 LEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAP 317
LEPY+G HYPATDIPQASRFL +++VRMI DC A PV +IQD+ L QPL L GSTLRAP
Sbjct: 282 LEPYIGLHYPATDIPQASRFLFKQSRVRMIVDCHATPVSIIQDEALMQPLCLVGSTLRAP 341
Query: 318 HGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRY 377
HGCHA+YM NMGSIASL M+V IN +DE + R LWGLVVCHHTS R +PFPLRY
Sbjct: 342 HGCHAQYMANMGSIASLAMAVIINGNDDEAIGGRSSMR-LWGLVVCHHTSARSIPFPLRY 400
Query: 378 ACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKC 437
ACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDMLLRDSP GIVTQ+P++MDLVKC
Sbjct: 401 ACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKC 460
Query: 438 DGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAV 497
DGAALYY+GK + LGVTP E QIKDI EWLL +H STGLSTDSL +AGYPGA LGDAV
Sbjct: 461 DGAALYYQGKYYPLGVTPAEAQIKDIVEWLLAFHGDSTGLSTDSLADAGYPGAALLGDAV 520
Query: 498 CGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRS 557
CG+A IT+KDFLFWFRSHTAKEIKWGGAKH KD ++MHPRSSFKAFLEVVK RS
Sbjct: 521 CGMAVAYITNKDFLFWFRSHTAKEIKWGGAKHHPEDKDDSQRMHPRSSFKAFLEVVKSRS 580
Query: 558 LPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLI 617
LPW++ EMDAIHSLQLILR S +D A +SK + N ++ +DEL + EMVRLI
Sbjct: 581 LPWDNAEMDAIHSLQLILRDSFRDAEATNSKAVANAQLRGLELQGMDELSSVAREMVRLI 640
Query: 618 ETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
ETA PI AVD G +NGWN+K AELTGL+V++A+G +LV DL+ +S + V +L A
Sbjct: 641 ETATAPIFAVDIDGCINGWNAKVAELTGLSVEEAMGKSLVHDLIYKESKETVDQLLRRAL 700
>gi|78643880|emb|CAJ21303.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 866 bits (2237), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/680 (61%), Positives = 515/680 (75%), Gaps = 14/680 (2%)
Query: 7 NKTNYSRSSSARSKQN-----ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
N+ S +S+ R + ++ AQ ++DA+L F++S FDYS SV +
Sbjct: 15 NQVQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHTQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSA 675
V DLV + ++V ++ A
Sbjct: 672 VHDLVYKEYEEIVDKLIHRA 691
>gi|359806634|ref|NP_001241532.1| phytochrome type A-like [Glycine max]
gi|190586157|gb|ACE79195.1| phytochrome A-1 [Glycine max]
gi|207367150|dbj|BAG72095.1| phytochrome A [Glycine max]
gi|371940264|dbj|BAL45569.1| Phytochrome A2 [Glycine max]
Length = 1123
Score = 866 bits (2237), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/662 (62%), Positives = 516/662 (77%), Gaps = 10/662 (1%)
Query: 27 AQTSIDAKLAEDFDESDFDYSTS--VNISSSTSNVPS----STVSAYLQRVQRGRLIQPF 80
A ++DAKL F+ES + S V IS + V +AYL +Q+G++IQPF
Sbjct: 24 ALATVDAKLHATFEESGSSFDYSSSVRISGTADGVNQPRHDKVTTAYLHHMQKGKMIQPF 83
Query: 81 GCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQK 140
GC++A+DE+ V+ YSENAPEML + HAVP++ AL +G D++TLFT+ A+ALQK
Sbjct: 84 GCLLALDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHPALGIGTDIKTLFTAPSASALQK 143
Query: 141 AANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKL 200
A F EV LLNP+LIHCKTSGKPFYAI+HR+ ++ID EPV P +VP+TAAGAL+SYKL
Sbjct: 144 ALGFAEVLLLNPVLIHCKTSGKPFYAIIHRVTGSMIIDFEPVKPYEVPMTAAGALQSYKL 203
Query: 201 AAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEP 260
AAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM YKFHED+HGEV+AE +P LEP
Sbjct: 204 AAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVIAEITKPGLEP 263
Query: 261 YLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGC 320
YLG HYPATDIPQASRFL MKNKVRMI DC A V+V+QD+KL L+LCGSTLRAPH C
Sbjct: 264 YLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVRVLQDEKLPFDLTLCGSTLRAPHSC 323
Query: 321 HARYMENMGSIASLVMSVTINEAEDELDND--QEQGRK-LWGLVVCHHTSPRFVPFPLRY 377
HA+YM NM SIASLVM+V +N+ E++ D D Q Q RK LWGLVVCH+T+PRFVPFPLRY
Sbjct: 324 HAQYMANMDSIASLVMAVVVNDNEEDGDTDAIQPQKRKRLWGLVVCHNTTPRFVPFPLRY 383
Query: 378 ACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKC 437
ACEFL QVF + VNKE+EL Q+ EK+ILRTQT+LCD+++RD+P+GIV+++PN+MDLVKC
Sbjct: 384 ACEFLAQVFAIHVNKEIELEYQIIEKNILRTQTLLCDLVMRDAPLGIVSESPNIMDLVKC 443
Query: 438 DGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAV 497
DGAAL Y+ K+W LGVTP+E QI++IA WL EYH STG STDSL +AG+P AL+LGD V
Sbjct: 444 DGAALIYKNKVWRLGVTPSESQIREIAFWLSEYHMDSTGFSTDSLSDAGFPSALSLGDVV 503
Query: 498 CGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRS 557
CG+AAV++T+KD +FWFRSHTA EI+WGGAKH++G KD GR+MHPRSSFK FL+VVK RS
Sbjct: 504 CGMAAVRVTAKDVVFWFRSHTAAEIRWGGAKHEAGEKDDGRRMHPRSSFKVFLDVVKARS 563
Query: 558 LPWEDVEMDAIHSLQLILRGSLQDEVAED-SKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
LPW++ E+DA+HSLQLILR + +D + D + +N D +IE + EL +T+E+VRL
Sbjct: 564 LPWKEYEIDAMHSLQLILRNAFKDTESMDLNTKAINTRLSDLKIEGMQELEAVTSEIVRL 623
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
IETA VPILAVD G VNGWN K AELTGL V +A+G L+ LV S D VK ML+ A
Sbjct: 624 IETATVPILAVDVDGLVNGWNIKIAELTGLPVGEAMGKHLLTLVEDSSTDRVKKMLNLAL 683
Query: 677 LA 678
L
Sbjct: 684 LG 685
>gi|78643894|emb|CAJ21310.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 865 bits (2236), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/680 (62%), Positives = 515/680 (75%), Gaps = 13/680 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHTQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSA 675
V DLV + ++V ++ A
Sbjct: 672 VHDLVYKEYEEIVDKLIHRA 691
>gi|78643878|emb|CAJ21302.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 865 bits (2236), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/680 (62%), Positives = 515/680 (75%), Gaps = 13/680 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHTQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSA 675
V DLV + ++V ++ A
Sbjct: 672 VHDLVYKEYEEIVDKLIHRA 691
>gi|78643874|emb|CAJ21300.1| phytochrome B2 [Populus tremula]
Length = 1144
Score = 865 bits (2236), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/680 (62%), Positives = 515/680 (75%), Gaps = 13/680 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHTQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSA 675
V DLV + ++V ++ A
Sbjct: 672 VHDLVYKEYEEIVDKLIHRA 691
>gi|78643872|emb|CAJ21299.1| phytochrome B2 [Populus tremula]
Length = 1144
Score = 865 bits (2235), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/680 (62%), Positives = 515/680 (75%), Gaps = 13/680 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHTQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSA 675
V DLV + ++V ++ A
Sbjct: 672 VHDLVYKEYEEIVDKLIHRA 691
>gi|78643898|emb|CAJ21312.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 865 bits (2235), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/680 (62%), Positives = 515/680 (75%), Gaps = 13/680 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHTQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSA 675
V DLV + ++V ++ A
Sbjct: 672 VHDLVYKEYEEIVDKLIHRA 691
>gi|78643868|emb|CAJ21297.1| phytochrome B2 [Populus tremula]
Length = 1144
Score = 865 bits (2235), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/680 (62%), Positives = 515/680 (75%), Gaps = 13/680 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHTQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSA 675
V DLV + ++V ++ A
Sbjct: 672 VHDLVYKEYEEIVDKLIHRA 691
>gi|78643916|emb|CAJ21321.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 865 bits (2235), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/680 (62%), Positives = 515/680 (75%), Gaps = 13/680 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHTQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSA 675
V DLV + ++V ++ A
Sbjct: 672 VHDLVYKEYEEIVDKLIHRA 691
>gi|189409278|gb|ACC60970.1| phytochrome B [Vitis riparia]
Length = 1129
Score = 865 bits (2235), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/684 (61%), Positives = 522/684 (76%), Gaps = 13/684 (1%)
Query: 3 SKSTNKTNYSRSSSAR---SKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISS 54
++S ++ S +S+ R + ++ AQ ++DA+L +++S FDYS SV +
Sbjct: 8 TQSHHQAQSSGTSNLRVYHTDSMSKAIAQYTMDARLHAVYEQSGESGKSFDYSQSVR--T 65
Query: 55 STSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNI 114
+T +VP ++AYL ++QRG IQPFGCM+AVDE F V+ +SENA EML L P +VP++
Sbjct: 66 TTQSVPEQQITAYLSKIQRGGHIQPFGCMLAVDEATFRVIAFSENAREMLGLTPQSVPSL 125
Query: 115 EQQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
E+ + L +G DVRTLFT S A L+KA E+ LLNP+ IH K SGKPFYAILHRIDVG
Sbjct: 126 EKPEILLVGTDVRTLFTPSSAVLLEKAFGAREITLLNPVWIHSKNSGKPFYAILHRIDVG 185
Query: 175 LVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYD 234
+VIDLEP +D ++ AGA++S KLA +AIS LQSLP G+I+LLC+ +V V +LTGYD
Sbjct: 186 IVIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDINLLCETVVENVRELTGYD 245
Query: 235 RVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPP 294
RVMVYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A P
Sbjct: 246 RVMVYKFHEDEHGEVVAESKRSDLEPYIGLHYPATDIPQASRFLFRQNRVRMIVDCHATP 305
Query: 295 VKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG 354
V VIQD+ L QPL L GSTLRAPHGCHA+YM NMGSIASL M+V IN +++E +
Sbjct: 306 VLVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLAMAVIINGSDEEAIGGRNLM 365
Query: 355 RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCD 414
R LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCD
Sbjct: 366 R-LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHVLRTQTLLCD 424
Query: 415 MLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGS 474
MLLRDSP GIVTQ+P++MDLVKCDGAALYY GK + GVTPTE QIKDIAEWLL H S
Sbjct: 425 MLLRDSPTGIVTQSPSIMDLVKCDGAALYYLGKYYPTGVTPTEAQIKDIAEWLLANHADS 484
Query: 475 TGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGK 534
TGLSTDSL +AGYPGA +LGDAVCG+A ITS+DFLFWFRSHTAKEIKWGGAKH K
Sbjct: 485 TGLSTDSLADAGYPGAASLGDAVCGMAVAYITSRDFLFWFRSHTAKEIKWGGAKHHPEDK 544
Query: 535 DGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEV-AEDSKMIVNV 593
D G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D +SK +++
Sbjct: 545 DDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFKDATDGSNSKAVMHA 604
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
+ ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G
Sbjct: 605 QLGELELQGMDELSSVAREMVRLIETATAPIFAVDVDGCINGWNAKVAELTGLSVEEAMG 664
Query: 654 TALV-DLVAGDSVDVVKNMLSSAF 676
+LV DLV +S + V +L A
Sbjct: 665 KSLVHDLVYKESEETVDKLLHHAL 688
>gi|78643884|emb|CAJ21305.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 865 bits (2235), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/680 (62%), Positives = 515/680 (75%), Gaps = 13/680 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHTQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSA 675
V DLV + ++V ++ A
Sbjct: 672 VHDLVYKEYEEIVDKLIHRA 691
>gi|189409279|gb|ACC60966.1| phytochrome B [Vitis vinifera]
Length = 1129
Score = 865 bits (2235), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/684 (61%), Positives = 522/684 (76%), Gaps = 13/684 (1%)
Query: 3 SKSTNKTNYSRSSSAR---SKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISS 54
++S ++ S +S+ R + ++ AQ ++DA+L +++S FDYS SV +
Sbjct: 8 TQSHHQAQSSGTSNLRVYHTDSMSKAIAQYTMDARLHAVYEQSGESGKSFDYSQSVR--T 65
Query: 55 STSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNI 114
+T +VP ++AYL ++QRG IQPFGCM+AVDE F V+ +SENA EML L P +VP++
Sbjct: 66 TTQSVPEQQITAYLSKIQRGGHIQPFGCMLAVDEATFRVIAFSENAREMLGLTPQSVPSL 125
Query: 115 EQQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
E+ + L +G DVRTLFT S A L+KA E+ LLNP+ IH K SGKPFYAILHRIDVG
Sbjct: 126 EKPEILLVGTDVRTLFTPSSAVLLEKAFRAREITLLNPVWIHSKNSGKPFYAILHRIDVG 185
Query: 175 LVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYD 234
+VIDLEP +D ++ AGA++S KLA +AIS LQSLP G+I+LLC+ +V V +LTGYD
Sbjct: 186 IVIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDINLLCETVVENVRELTGYD 245
Query: 235 RVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPP 294
RVMVYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A P
Sbjct: 246 RVMVYKFHEDEHGEVVAESKRSDLEPYIGLHYPATDIPQASRFLFRQNRVRMIVDCHATP 305
Query: 295 VKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG 354
V VIQD+ L QPL L GSTLRAPHGCHA+YM NMGS ASL M+V IN +++E +
Sbjct: 306 VLVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSTASLAMAVIINGSDEEAIGGRNLM 365
Query: 355 RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCD 414
R LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCD
Sbjct: 366 R-LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHVLRTQTLLCD 424
Query: 415 MLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGS 474
MLLRDSP GIVTQ+P++MDLVKCDGAALYY+GK + GVTPTE QIKDIAEWLL H S
Sbjct: 425 MLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGKYYPTGVTPTEAQIKDIAEWLLANHADS 484
Query: 475 TGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGK 534
TGLSTDSL +AGYPGA +LGDAVCG+A ITS+DFLFWFRSHTAKEIKWGGAKH K
Sbjct: 485 TGLSTDSLADAGYPGAASLGDAVCGMAVAYITSRDFLFWFRSHTAKEIKWGGAKHHPEDK 544
Query: 535 DGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEV-AEDSKMIVNV 593
D G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D +SK +++
Sbjct: 545 DDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFKDATDGSNSKAVMHA 604
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
+ ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G
Sbjct: 605 QLGELELQGMDELSSVAREMVRLIETATAPIFAVDVDGCINGWNAKVAELTGLSVEEAMG 664
Query: 654 TALV-DLVAGDSVDVVKNMLSSAF 676
+LV DLV +S + V +L A
Sbjct: 665 KSLVHDLVYKESEETVDKLLHHAL 688
>gi|78643866|emb|CAJ21296.1| phytochrome B2 [Populus tremula]
Length = 1144
Score = 865 bits (2234), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/680 (62%), Positives = 515/680 (75%), Gaps = 13/680 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHTQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSA 675
V DLV + ++V ++ A
Sbjct: 672 VHDLVYKEYEEIVDKLIHRA 691
>gi|78643938|emb|CAJ21332.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 865 bits (2234), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/680 (62%), Positives = 515/680 (75%), Gaps = 13/680 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHTQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSA 675
V DLV + ++V ++ A
Sbjct: 672 VHDLVYKEYEEIVDKLIHRA 691
>gi|78643864|emb|CAJ21295.1| phytochrome B2 [Populus tremula]
Length = 1144
Score = 865 bits (2234), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/680 (62%), Positives = 515/680 (75%), Gaps = 13/680 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHTQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSA 675
V DLV + ++V ++ A
Sbjct: 672 VHDLVYKEYEEIVDKLIHRA 691
>gi|406685473|gb|AFS51177.1| phytochrome P, partial [Araucaria luxurians]
Length = 679
Score = 865 bits (2234), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/637 (66%), Positives = 498/637 (78%), Gaps = 26/637 (4%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD------- 118
AYL R+QRG IQPFGCM+AV+E F ++ YSENA EMLDL P +VPN++
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFLIIAYSENAVEMLDLMPQSVPNMDMDRDEAMTSH 60
Query: 119 ----ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
+T+G DVRTLFT+S A AL++AA E++L+NPI +H K + KPFYAI+HRIDVG
Sbjct: 61 GGGRVMTIGTDVRTLFTTSSARALERAAMAHEISLMNPIWVHSKNTNKPFYAIVHRIDVG 120
Query: 175 LVIDLEPVNPDDVPVTAAGA-------LKSYKLAAKAISRLQSLPSGNISLLCDVLVNEV 227
+V+DLEPV A ++S KLA +AISRLQSLP+G+I LLCD +V +V
Sbjct: 121 MVMDLEPVRTGSGGGGGGDAALSAAGAVQSQKLAVRAISRLQSLPAGDIGLLCDTVVEDV 180
Query: 228 SDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMI 287
+LTGYDRVMVYKFHEDEHGEV+AE RR DLEPYLG HYPATDIPQASRFL M+N+VRMI
Sbjct: 181 RELTGYDRVMVYKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMI 240
Query: 288 CDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDEL 347
CDC A PVKVIQ ++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN EDE
Sbjct: 241 CDCRAAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEG 300
Query: 348 DNDQEQGR-------KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQL 400
G KLWGLVVCHHTSPR VPFPLRYACEFL+Q FG+Q+N E++L+AQL
Sbjct: 301 GGGGGSGSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQL 360
Query: 401 REKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQI 460
EKHILRTQT+LCDMLLRD+P+GIVT +P++MDLVKCDGAALYY G W+LGVTPTE QI
Sbjct: 361 TEKHILRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQI 420
Query: 461 KDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAK 520
KDIA+WLLEYH STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAK
Sbjct: 421 KDIADWLLEYHVDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAK 480
Query: 521 EIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQ 580
E+KWGGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS Q
Sbjct: 481 EMKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQ 540
Query: 581 DEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKA 640
D ++K +V+ D +++ IDEL + +EMVRLIETA PILAVD++G +NGWN+K
Sbjct: 541 DIDDSNTKTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKV 600
Query: 641 AELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
AELTGL V +A+G +LV DL+ +S + V ML A
Sbjct: 601 AELTGLPVGEAMGKSLVHDLIFEESANTVDKMLYHAL 637
>gi|78643910|emb|CAJ21318.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 865 bits (2234), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/680 (62%), Positives = 514/680 (75%), Gaps = 13/680 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAHYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHTQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSA 675
V DLV + ++V ++ A
Sbjct: 672 VHDLVYKEYEEIVDKLIHRA 691
>gi|78643892|emb|CAJ21309.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 864 bits (2233), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/680 (62%), Positives = 515/680 (75%), Gaps = 13/680 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDSALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHNQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSA 675
V DLV + ++V ++ A
Sbjct: 672 VHDLVYKEYEEIVDKLIHRA 691
>gi|78643856|emb|CAJ21291.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 864 bits (2233), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/680 (61%), Positives = 515/680 (75%), Gaps = 13/680 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F ++ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRLIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHTQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSA 675
V DLV + ++V ++ A
Sbjct: 672 VHDLVYKEYEEIVDKLIHRA 691
>gi|78643906|emb|CAJ21316.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 864 bits (2233), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/680 (62%), Positives = 515/680 (75%), Gaps = 13/680 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHTQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSA 675
V DLV + ++V ++ A
Sbjct: 672 VHDLVYKEYEEIVDKLIHRA 691
>gi|371940272|dbj|BAL45573.1| truncate phytochrome A2 protein [Glycine max]
Length = 759
Score = 864 bits (2232), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/662 (62%), Positives = 516/662 (77%), Gaps = 10/662 (1%)
Query: 27 AQTSIDAKLAEDFDESDFDYSTS--VNISSSTSNVPS----STVSAYLQRVQRGRLIQPF 80
A ++DAKL F+ES + S V IS + V +AYL +Q+G++IQPF
Sbjct: 24 ALATVDAKLHATFEESGSSFDYSSSVRISGTADGVNQPRHDKVTTAYLHHMQKGKMIQPF 83
Query: 81 GCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQK 140
GC++A+DE+ V+ YSENAPEML + HAVP++ AL +G D++TLFT+ A+ALQK
Sbjct: 84 GCLLALDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHPALGIGTDIKTLFTAPSASALQK 143
Query: 141 AANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKL 200
A F EV LLNP+LIHCKTSGKPFYAI+HR+ ++ID EPV P +VP+TAAGAL+SYKL
Sbjct: 144 ALGFAEVLLLNPVLIHCKTSGKPFYAIIHRVTGSMIIDFEPVKPYEVPMTAAGALQSYKL 203
Query: 201 AAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEP 260
AAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM YKFHED+HGEV+AE +P LEP
Sbjct: 204 AAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVIAEITKPGLEP 263
Query: 261 YLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGC 320
YLG HYPATDIPQASRFL MKNKVRMI DC A V+V+QD+KL L+LCGSTLRAPH C
Sbjct: 264 YLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVRVLQDEKLPFDLTLCGSTLRAPHSC 323
Query: 321 HARYMENMGSIASLVMSVTINEAEDELDND--QEQGRK-LWGLVVCHHTSPRFVPFPLRY 377
HA+YM NM SIASLVM+V +N+ E++ D D Q Q RK LWGLVVCH+T+PRFVPFPLRY
Sbjct: 324 HAQYMANMDSIASLVMAVVVNDNEEDGDTDAIQPQKRKRLWGLVVCHNTTPRFVPFPLRY 383
Query: 378 ACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKC 437
ACEFL QVF + VNKE+EL Q+ EK+ILRTQT+LCD+++RD+P+GIV+++PN+MDLVKC
Sbjct: 384 ACEFLAQVFAIHVNKEIELEYQIIEKNILRTQTLLCDLVMRDAPLGIVSESPNIMDLVKC 443
Query: 438 DGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAV 497
DGAAL Y+ K+W LGVTP+E QI++IA WL EYH STG STDSL +AG+P AL+LGD V
Sbjct: 444 DGAALIYKNKVWRLGVTPSESQIREIAFWLSEYHMDSTGFSTDSLSDAGFPSALSLGDVV 503
Query: 498 CGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRS 557
CG+AAV++T+KD +FWFRSHTA EI+WGGAKH++G KD GR+MHPRSSFK FL+VVK RS
Sbjct: 504 CGMAAVRVTAKDVVFWFRSHTAAEIRWGGAKHEAGEKDDGRRMHPRSSFKVFLDVVKARS 563
Query: 558 LPWEDVEMDAIHSLQLILRGSLQDEVAED-SKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
LPW++ E+DA+HSLQLILR + +D + D + +N D +IE + EL +T+E+VRL
Sbjct: 564 LPWKEYEIDAMHSLQLILRNAFKDTESMDLNTKAINTRLSDLKIEGMQELEAVTSEIVRL 623
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
IETA VPILAVD G VNGWN K AELTGL V +A+G L+ LV S D VK ML+ A
Sbjct: 624 IETATVPILAVDVDGLVNGWNIKIAELTGLPVGEAMGKHLLTLVEDSSTDRVKKMLNLAL 683
Query: 677 LA 678
L
Sbjct: 684 LG 685
>gi|78643890|emb|CAJ21308.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 864 bits (2232), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/680 (61%), Positives = 515/680 (75%), Gaps = 14/680 (2%)
Query: 7 NKTNYSRSSSARSKQN-----ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
N+ S +S+ R + ++ AQ ++DA+L F++S FDYS SV +
Sbjct: 15 NQVQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHNQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSA 675
V DLV + ++V ++ A
Sbjct: 672 VHDLVYKEYEEIVDKLIHRA 691
>gi|78643914|emb|CAJ21320.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 864 bits (2232), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/680 (62%), Positives = 515/680 (75%), Gaps = 13/680 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSTRCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHTQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVDGCINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSA 675
V DLV + ++V ++ A
Sbjct: 672 VHDLVYKEYEEIVDKLIHRA 691
>gi|78643870|emb|CAJ21298.1| phytochrome B2 [Populus tremula]
Length = 1144
Score = 864 bits (2232), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/680 (62%), Positives = 515/680 (75%), Gaps = 13/680 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHNQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSA 675
V DLV + ++V ++ A
Sbjct: 672 VHDLVYKEYEEIVDKLIHRA 691
>gi|78643904|emb|CAJ21315.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 863 bits (2231), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/680 (62%), Positives = 514/680 (75%), Gaps = 13/680 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E +L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMEFQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHNQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSA 675
V DLV + ++V ++ A
Sbjct: 672 VHDLVYKEYEEIVDKLIHRA 691
>gi|78643902|emb|CAJ21314.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 863 bits (2231), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/680 (62%), Positives = 515/680 (75%), Gaps = 13/680 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHNQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSA 675
V DLV + ++V ++ A
Sbjct: 672 VHDLVYKEYEEIVDKLIHRA 691
>gi|78643918|emb|CAJ21322.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 863 bits (2231), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/680 (62%), Positives = 515/680 (75%), Gaps = 13/680 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHNQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSA 675
V DLV + ++V ++ A
Sbjct: 672 VHDLVYKEYEEIVDKLIHRA 691
>gi|78643860|emb|CAJ21293.1| phytochrome B2 [Populus tremula]
Length = 1144
Score = 863 bits (2231), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/680 (61%), Positives = 515/680 (75%), Gaps = 13/680 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA +EQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAANEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHTQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSA 675
V DLV + ++V ++ A
Sbjct: 672 VHDLVYKEYEEIVDKLIHRA 691
>gi|78643876|emb|CAJ21301.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 863 bits (2231), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/680 (62%), Positives = 515/680 (75%), Gaps = 13/680 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHNQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSA 675
V DLV + ++V ++ A
Sbjct: 672 VHDLVYKEYEEIVDKLIHRA 691
>gi|78643908|emb|CAJ21317.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 863 bits (2231), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/680 (62%), Positives = 514/680 (75%), Gaps = 13/680 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKHNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHTQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSA 675
V DLV + ++V ++ A
Sbjct: 672 VHDLVYKEYEEIVDKLIHRA 691
>gi|371940260|dbj|BAL45567.1| Phytochrome A2 [Glycine soja]
Length = 1123
Score = 863 bits (2231), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/662 (62%), Positives = 516/662 (77%), Gaps = 10/662 (1%)
Query: 27 AQTSIDAKLAEDFDESDFDYSTS--VNISSSTSNVPS----STVSAYLQRVQRGRLIQPF 80
A ++DAKL F+ES + S V IS + V +AYL +Q+G++IQPF
Sbjct: 24 ALATVDAKLHATFEESGSSFDYSSSVRISGTADGVNQPRHDKVTTAYLHHMQKGKMIQPF 83
Query: 81 GCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQK 140
GC++A+DE+ V+ YSENAPEML + HAVP++ AL +G D++TLFT+ A+ALQK
Sbjct: 84 GCLLALDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHPALGIGTDIKTLFTAPSASALQK 143
Query: 141 AANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKL 200
A F EV+LLNP+LIHCKTSGKPFYAI+HR+ ++ID EPV P +VP+TAAGAL+SYKL
Sbjct: 144 ALGFAEVSLLNPVLIHCKTSGKPFYAIIHRVTGSMIIDFEPVKPYEVPMTAAGALQSYKL 203
Query: 201 AAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEP 260
AAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM YKFHED+HGEV+AE +P LE
Sbjct: 204 AAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVIAEITKPGLEL 263
Query: 261 YLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGC 320
YLG HYPATDIPQASRFL MKNKVRMI DC A V+V+QD+KL L+LCGSTLRAPH C
Sbjct: 264 YLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVRVLQDEKLPFDLTLCGSTLRAPHSC 323
Query: 321 HARYMENMGSIASLVMSVTINEAEDELDND--QEQGRK-LWGLVVCHHTSPRFVPFPLRY 377
HA+YM NM SIASLVM+V +N+ E++ D D Q Q RK LWGLVVCH+T+PRFVPFPLRY
Sbjct: 324 HAQYMANMDSIASLVMAVVVNDNEEDGDTDAIQPQKRKRLWGLVVCHNTTPRFVPFPLRY 383
Query: 378 ACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKC 437
ACEFL QVF + VNKE+EL Q+ EK+ILRTQT+LCD+++RD+P+GIV+++PN+MDLVKC
Sbjct: 384 ACEFLAQVFAIHVNKEIELEYQIIEKNILRTQTLLCDLVMRDAPLGIVSESPNIMDLVKC 443
Query: 438 DGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAV 497
DGAAL Y+ K+W LGVTP+E QI++IA WL EYH STG STDSL +AG+P AL+LGD V
Sbjct: 444 DGAALIYKNKVWRLGVTPSESQIREIAFWLSEYHMDSTGFSTDSLSDAGFPSALSLGDVV 503
Query: 498 CGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRS 557
CG+AAV++T+KD +FWFRSHTA EI+WGGAKH++G KD GR+MHPRSSFK FL+VVK RS
Sbjct: 504 CGMAAVRVTAKDVVFWFRSHTAAEIRWGGAKHEAGEKDDGRRMHPRSSFKVFLDVVKARS 563
Query: 558 LPWEDVEMDAIHSLQLILRGSLQDEVAED-SKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
LPW++ E+DA+HSLQLILR + +D + D + +N D +IE + EL +T+E+VRL
Sbjct: 564 LPWKEYEIDAMHSLQLILRNAFKDTESMDLNTKAINTRLSDLKIEGMQELEAVTSEIVRL 623
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
IETA VPILAVD G VNGWN K AELTGL V +A+G L+ LV S D VK ML+ A
Sbjct: 624 IETATVPILAVDVDGLVNGWNIKIAELTGLPVGEAMGKHLLTLVEDSSTDRVKKMLNLAL 683
Query: 677 LA 678
L
Sbjct: 684 LG 685
>gi|78643922|emb|CAJ21324.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 863 bits (2231), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/680 (62%), Positives = 515/680 (75%), Gaps = 13/680 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHNQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSA 675
V DLV + ++V ++ A
Sbjct: 672 VHDLVYKEYEEIVDKLIHRA 691
>gi|78643886|emb|CAJ21306.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 863 bits (2230), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/680 (62%), Positives = 515/680 (75%), Gaps = 13/680 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSTRCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHNQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSA 675
V DLV + ++V ++ A
Sbjct: 672 VHDLVYKEYEEIVDKLIHRA 691
>gi|78643900|emb|CAJ21313.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 863 bits (2230), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/680 (62%), Positives = 515/680 (75%), Gaps = 13/680 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHNQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSA 675
V DLV + ++V ++ A
Sbjct: 672 VHDLVYKEYEEIVDKLIHRA 691
>gi|78643912|emb|CAJ21319.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 863 bits (2230), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/680 (61%), Positives = 515/680 (75%), Gaps = 14/680 (2%)
Query: 7 NKTNYSRSSSARSKQN-----ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
N+ S +S+ R + ++ AQ ++DA+L F++S FDYS SV +
Sbjct: 15 NQAQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHTQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVDGCINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSA 675
V DLV + ++V ++ A
Sbjct: 672 VHDLVYKEYEEIVDKLIHRA 691
>gi|78643882|emb|CAJ21304.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 863 bits (2230), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/680 (61%), Positives = 514/680 (75%), Gaps = 13/680 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSTTCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHTQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSA 675
V DLV + ++V ++ A
Sbjct: 672 VHDLVYKEYEEIVDKLIHRA 691
>gi|78643858|emb|CAJ21292.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 863 bits (2229), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/680 (62%), Positives = 514/680 (75%), Gaps = 13/680 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKDSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAHYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPAGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHNQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSA 675
V DLV + ++V ++ A
Sbjct: 672 VHDLVYKEYEEIVDKLIHRA 691
>gi|78643936|emb|CAJ21331.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 863 bits (2229), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/680 (61%), Positives = 514/680 (75%), Gaps = 14/680 (2%)
Query: 7 NKTNYSRSSSARSKQN-----ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
N+ S +S+ R + ++ AQ ++DA+L F++S FDYS SV +
Sbjct: 15 NQVQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKHNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHNQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSA 675
V DLV + ++V ++ A
Sbjct: 672 VHDLVYKEYEEIVDKLIHRA 691
>gi|371940266|dbj|BAL45570.1| truncate phytochrome A2 protein [Glycine max]
Length = 894
Score = 863 bits (2229), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/662 (62%), Positives = 516/662 (77%), Gaps = 10/662 (1%)
Query: 27 AQTSIDAKLAEDFDESDFDYSTS--VNISSSTSNVPS----STVSAYLQRVQRGRLIQPF 80
A ++DAKL F+ES + S V IS + V +AYL +Q+G++IQPF
Sbjct: 24 ALATVDAKLHATFEESGSSFDYSSSVRISGTADGVNQPRHDKVTTAYLHHMQKGKMIQPF 83
Query: 81 GCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQK 140
GC++A+DE+ V+ YSENAPEML + HAVP++ AL +G D++TLFT+ A+ALQK
Sbjct: 84 GCLLALDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHPALGIGTDIKTLFTAPSASALQK 143
Query: 141 AANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKL 200
A F EV LLNP+LIHCKTSGKPFYAI+HR+ ++ID EPV P +VP+TAAGAL+SYKL
Sbjct: 144 ALGFAEVLLLNPVLIHCKTSGKPFYAIIHRVTGSMIIDFEPVKPYEVPMTAAGALQSYKL 203
Query: 201 AAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEP 260
AAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM YKFHED+HGEV+AE +P LEP
Sbjct: 204 AAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVIAEITKPGLEP 263
Query: 261 YLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGC 320
YLG HYPATDIPQASRFL MKNKVRMI DC A V+V+QD+KL L+LCGSTLRAPH C
Sbjct: 264 YLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVRVLQDEKLPFDLTLCGSTLRAPHSC 323
Query: 321 HARYMENMGSIASLVMSVTINEAEDELDND--QEQGRK-LWGLVVCHHTSPRFVPFPLRY 377
HA+YM NM SIASLVM+V +N+ E++ D D Q Q RK LWGLVVCH+T+PRFVPFPLRY
Sbjct: 324 HAQYMANMDSIASLVMAVVVNDNEEDGDTDAIQPQKRKRLWGLVVCHNTTPRFVPFPLRY 383
Query: 378 ACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKC 437
ACEFL QVF + VNKE+EL Q+ EK+ILRTQT+LCD+++RD+P+GIV+++PN+MDLVKC
Sbjct: 384 ACEFLAQVFAIHVNKEIELEYQIIEKNILRTQTLLCDLVMRDAPLGIVSESPNIMDLVKC 443
Query: 438 DGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAV 497
DGAAL Y+ K+W LGVTP+E QI++IA WL EYH STG STDSL +AG+P AL+LGD V
Sbjct: 444 DGAALIYKNKVWRLGVTPSESQIREIAFWLSEYHMDSTGFSTDSLSDAGFPSALSLGDVV 503
Query: 498 CGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRS 557
CG+AAV++T+KD +FWFRSHTA EI+WGGAKH++G KD GR+MHPRSSFK FL+VVK RS
Sbjct: 504 CGMAAVRVTAKDVVFWFRSHTAAEIRWGGAKHEAGEKDDGRRMHPRSSFKVFLDVVKARS 563
Query: 558 LPWEDVEMDAIHSLQLILRGSLQDEVAED-SKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
LPW++ E+DA+HSLQLILR + +D + D + +N D +IE + EL +T+E+VRL
Sbjct: 564 LPWKEYEIDAMHSLQLILRNAFKDTESMDLNTKAINTRLSDLKIEGMQELEAVTSEIVRL 623
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
IETA VPILAVD G VNGWN K AELTGL V +A+G L+ LV S D VK ML+ A
Sbjct: 624 IETATVPILAVDVDGLVNGWNIKIAELTGLPVGEAMGKHLLTLVEDSSTDRVKKMLNLAL 683
Query: 677 LA 678
L
Sbjct: 684 LG 685
>gi|78643942|emb|CAJ21334.1| phytochrome B2 [Populus tremula]
Length = 1144
Score = 863 bits (2229), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/680 (62%), Positives = 514/680 (75%), Gaps = 13/680 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKHNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHNQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSA 675
V DLV + ++V ++ A
Sbjct: 672 VHDLVYKEYEEIVDKLIHRA 691
>gi|406685453|gb|AFS51167.1| phytochrome P, partial [Araucaria angustifolia]
Length = 675
Score = 863 bits (2229), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/633 (66%), Positives = 501/633 (79%), Gaps = 22/633 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD------- 118
AYL R+QRG IQPFGC +AV+E +F ++ YSENA EMLDL+P +VPN++
Sbjct: 1 AYLTRMQRGGTIQPFGCTLAVEETSFLIVAYSENAVEMLDLSPRSVPNMDMDRDEAMGSH 60
Query: 119 ----ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
+T+G DVRTLFT S A AL+KAA E++++NPI +H K + KPFYAI+HRIDVG
Sbjct: 61 GGGRVITIGTDVRTLFTPSSARALEKAAMAQEISMMNPIWVHSKNTNKPFYAIVHRIDVG 120
Query: 175 LVIDLEPVNPD-----DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSD 229
+VIDLEPV D ++AAGA++S KLA +AISRLQSLP+G+I LLCD +V +V +
Sbjct: 121 MVIDLEPVRTGSGGGGDAALSAAGAVQSQKLAVRAISRLQSLPTGDIGLLCDTVVEDVRE 180
Query: 230 LTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICD 289
LTGYDRVMVYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICD
Sbjct: 181 LTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICD 240
Query: 290 CLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN 349
C A PVKV+Q +L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN E+E
Sbjct: 241 CRAAPVKVVQAGQLKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEEEGGG 300
Query: 350 DQEQGR-----KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKH 404
G KLWGLVVCHHTS R VPFPLRYACEFL+Q FG+Q+N E++L+AQL EKH
Sbjct: 301 GGGSGSGRGSMKLWGLVVCHHTSSRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKH 360
Query: 405 ILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIA 464
ILRTQT+LCDMLLRD+P+GIVT +P++MDLVKCDGAALYY G W+LGVTPTE QIKDIA
Sbjct: 361 ILRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIA 420
Query: 465 EWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKW 524
+WLLEYH STGLSTDSL +AGYPGA +LGDAVCG+A +ITSKDFLFWFRSHTAKE+KW
Sbjct: 421 DWLLEYHGDSTGLSTDSLADAGYPGAASLGDAVCGMATARITSKDFLFWFRSHTAKEMKW 480
Query: 525 GGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVA 584
GGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD
Sbjct: 481 GGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDD 540
Query: 585 EDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELT 644
++K +V+ D +++ IDEL + +EMVRLIETA PILAVD++G +NGWN+K AELT
Sbjct: 541 SNTKTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAELT 600
Query: 645 GLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
GL V +A+G +LV DL+ +S + V ML A
Sbjct: 601 GLPVGEAMGKSLVHDLIFDESANTVDKMLYHAL 633
>gi|78643896|emb|CAJ21311.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 862 bits (2228), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/680 (61%), Positives = 514/680 (75%), Gaps = 13/680 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSH AKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHPAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHTQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSA 675
V DLV + ++V ++ A
Sbjct: 672 VHDLVYKEYEEIVDKLIHRA 691
>gi|371940268|dbj|BAL45571.1| truncate phytochrome A2 protein [Glycine max]
Length = 979
Score = 862 bits (2228), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/662 (62%), Positives = 516/662 (77%), Gaps = 10/662 (1%)
Query: 27 AQTSIDAKLAEDFDESDFDYSTS--VNISSSTSNVPS----STVSAYLQRVQRGRLIQPF 80
A ++DAKL F+ES + S V IS + V +AYL +Q+G++IQPF
Sbjct: 24 ALATVDAKLHATFEESGSSFDYSSSVRISGTADGVNQPRHDKVTTAYLHHMQKGKMIQPF 83
Query: 81 GCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQK 140
GC++A+DE+ V+ YSENAPEML + HAVP++ AL +G D++TLFT+ A+ALQK
Sbjct: 84 GCLLALDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHPALGIGTDIKTLFTAPSASALQK 143
Query: 141 AANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKL 200
A F EV LLNP+LIHCKTSGKPFYAI+HR+ ++ID EPV P +VP+TAAGAL+SYKL
Sbjct: 144 ALGFAEVLLLNPVLIHCKTSGKPFYAIIHRVTGSMIIDFEPVKPYEVPMTAAGALQSYKL 203
Query: 201 AAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEP 260
AAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM YKFHED+HGEV+AE +P LEP
Sbjct: 204 AAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVIAEITKPGLEP 263
Query: 261 YLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGC 320
YLG HYPATDIPQASRFL MKNKVRMI DC A V+V+QD+KL L+LCGSTLRAPH C
Sbjct: 264 YLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVRVLQDEKLPFDLTLCGSTLRAPHSC 323
Query: 321 HARYMENMGSIASLVMSVTINEAEDELDND--QEQGRK-LWGLVVCHHTSPRFVPFPLRY 377
HA+YM NM SIASLVM+V +N+ E++ D D Q Q RK LWGLVVCH+T+PRFVPFPLRY
Sbjct: 324 HAQYMANMDSIASLVMAVVVNDNEEDGDTDAIQPQKRKRLWGLVVCHNTTPRFVPFPLRY 383
Query: 378 ACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKC 437
ACEFL QVF + VNKE+EL Q+ EK+ILRTQT+LCD+++RD+P+GIV+++PN+MDLVKC
Sbjct: 384 ACEFLAQVFAIHVNKEIELEYQIIEKNILRTQTLLCDLVMRDAPLGIVSESPNIMDLVKC 443
Query: 438 DGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAV 497
DGAAL Y+ K+W LGVTP+E QI++IA WL EYH STG STDSL +AG+P AL+LGD V
Sbjct: 444 DGAALIYKNKVWRLGVTPSESQIREIAFWLSEYHMDSTGFSTDSLSDAGFPSALSLGDVV 503
Query: 498 CGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRS 557
CG+AAV++T+KD +FWFRSHTA EI+WGGAKH++G KD GR+MHPRSSFK FL+VVK RS
Sbjct: 504 CGMAAVRVTAKDVVFWFRSHTAAEIRWGGAKHEAGEKDDGRRMHPRSSFKVFLDVVKARS 563
Query: 558 LPWEDVEMDAIHSLQLILRGSLQDEVAED-SKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
LPW++ E+DA+HSLQLILR + +D + D + +N D +IE + EL +T+E+VRL
Sbjct: 564 LPWKEYEIDAMHSLQLILRNAFKDTESMDLNTKAINTRLSDLKIEGMQELEAVTSEIVRL 623
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
IETA VPILAVD G VNGWN K AELTGL V +A+G L+ LV S D VK ML+ A
Sbjct: 624 IETATVPILAVDVDGLVNGWNIKIAELTGLPVGEAMGKHLLTLVEDSSTDRVKKMLNLAL 683
Query: 677 LA 678
L
Sbjct: 684 LG 685
>gi|464387|sp|P29130.2|PHYB_TOBAC RecName: Full=Phytochrome B
gi|295346|gb|AAA34092.1| type II phytochrome [Nicotiana tabacum]
Length = 1132
Score = 862 bits (2228), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/680 (62%), Positives = 515/680 (75%), Gaps = 16/680 (2%)
Query: 3 SKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTS 57
S T+ NY S S + AQ + DA+L F++S FDYS S+ +++ S
Sbjct: 22 SSGTSNVNYKDSIS-------KAIAQYTADARLHAVFEQSGESGKSFDYSQSIK-TTTQS 73
Query: 58 NVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQ 117
VP ++AYL ++QRG IQPFGCMIAVDE +F V+ YSENA EML L P +VP++E+
Sbjct: 74 VVPEQQITAYLTKIQRGGHIQPFGCMIAVDEASFRVIAYSENACEMLSLTPQSVPSLERP 133
Query: 118 DALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVI 177
+ LT+G DVRTLFT S + L++A E+ LLNPI IH K SGKPFYAILHR+DVG+VI
Sbjct: 134 EILTVGTDVRTLFTPSSSVLLERAFGAREITLLNPIWIHSKNSGKPFYAILHRVDVGIVI 193
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEP +D ++ AGA++S KLA +AIS LQSLP G++ LLCD +V V +LTGYDRVM
Sbjct: 194 DLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDVKLLCDTVVESVRELTGYDRVM 253
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVVAE + PDLEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+V
Sbjct: 254 VYKFHEDEHGEVVAESKIPDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVRV 313
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKL 357
+QD+ L QPL L GSTLRAPHGCHA+YM NMGSIASL ++V IN ++E + R L
Sbjct: 314 VQDESLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLTLAVIINGNDEEAVGGRSSMR-L 372
Query: 358 WGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLL 417
WGLVV HHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDMLL
Sbjct: 373 WGLVVGHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHVLRTQTLLCDMLL 432
Query: 418 RDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGL 477
RDSP GIV Q+P++MDLVKCDGAALY +GK + LGVTPTE QIKDI EWLL YH STGL
Sbjct: 433 RDSPTGIVIQSPSIMDLVKCDGAALYCQGKYYPLGVTPTEAQIKDIVEWLLTYHGDSTGL 492
Query: 478 STDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGG 537
STDSL +AGYPGA LGDAVCG+A ITSKDFLFWFRSHTAKEIKWGGAKH KD G
Sbjct: 493 STDSLADAGYPGAALLGDAVCGMAVAYITSKDFLFWFRSHTAKEIKWGGAKHHPEDKDDG 552
Query: 538 RKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVD 597
++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSL LILR S +D A +SK +V+ +
Sbjct: 553 QRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSL-LILRDSFKDAEASNSKAVVHAQLGE 611
Query: 598 DRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV 657
++ IDEL + EMVRLIETA PI AVD G +NGWN+K AELT L+V++A+G +LV
Sbjct: 612 MELQGIDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAELTDLSVEEAMGKSLV 671
Query: 658 -DLVAGDSVDVVKNMLSSAF 676
DLV +S + + +L +A
Sbjct: 672 HDLVHKESQETAEKLLFNAL 691
>gi|78643946|emb|CAJ21336.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 862 bits (2227), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/680 (61%), Positives = 514/680 (75%), Gaps = 13/680 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQA RFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQAPRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHTQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSA 675
V DLV + ++V ++ A
Sbjct: 672 VHDLVYKEYEEIVDKLIHRA 691
>gi|78643932|emb|CAJ21329.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 862 bits (2227), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/680 (62%), Positives = 513/680 (75%), Gaps = 13/680 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKHNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAHYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHNQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSA 675
V DLV + ++V ++ A
Sbjct: 672 VHDLVYKEYEEIVDKLIHRA 691
>gi|78643862|emb|CAJ21294.1| phytochrome B2 [Populus tremula]
Length = 1144
Score = 862 bits (2227), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/680 (61%), Positives = 514/680 (75%), Gaps = 13/680 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ GA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSITGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHNQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEEAVGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSA 675
V DLV + ++V ++ A
Sbjct: 672 VHDLVYKEYEEIVDKLIHRA 691
>gi|363547901|gb|AEW26990.1| phytochrome P [Pinus strobus]
Length = 590
Score = 862 bits (2226), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/602 (68%), Positives = 496/602 (82%), Gaps = 15/602 (2%)
Query: 76 LIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGA 135
+IQPFGC++AV+E F ++ YSENA EMLDLAP +VP++EQ+ LT+G DVRT FT++ +
Sbjct: 1 IIQPFGCVLAVEETTFRIIAYSENAVEMLDLAPQSVPSMEQE-VLTIGTDVRTQFTAASS 59
Query: 136 AALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGAL 195
+L+KAA E++L+NPI +HCK S KPFYAI+HRIDVG+VIDLEP+ D ++AAGA+
Sbjct: 60 HSLEKAAVTQEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDLEPLG--DAFMSAAGAV 117
Query: 196 KSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRR 255
+S KLA +AISRLQSLP G+I LLCD +V V +LTGYDRVMVYKFHEDEHGEVV E RR
Sbjct: 118 QSQKLAVRAISRLQSLPCGDIGLLCDTVVENVRELTGYDRVMVYKFHEDEHGEVVFEIRR 177
Query: 256 PDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLR 315
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC+A PVKVIQ ++L QPL L GSTLR
Sbjct: 178 SDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQSEELMQPLCLVGSTLR 237
Query: 316 APHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPL 375
APHGCHA+YM NMGSIASLVM+V IN KLWGLVVCHHTSPR VPFPL
Sbjct: 238 APHGCHAQYMANMGSIASLVMAVIIN-----------GNMKLWGLVVCHHTSPRPVPFPL 286
Query: 376 RYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLV 435
RYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LCDMLLR +P+GIVTQ+P++MDLV
Sbjct: 287 RYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRHAPMGIVTQSPSIMDLV 346
Query: 436 KCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGD 495
KCDGAALYY GK W+LGVTPTE QIKDIA+WLLE+H STGLSTDSL +AGYPGA +LGD
Sbjct: 347 KCDGAALYYGGKCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTDSLADAGYPGAASLGD 406
Query: 496 AVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQ 555
AVCG+A+ +ITSKDF+FWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+
Sbjct: 407 AVCGMASARITSKDFIFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKR 466
Query: 556 RSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVR 615
RSLPW++VE+DAIHSLQLILRGS QD +K +V+ D R++ IDEL + +EMVR
Sbjct: 467 RSLPWDNVEIDAIHSLQLILRGSFQDIDDSGTKTMVHSQLNDLRLQGIDELSSVASEMVR 526
Query: 616 LIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSS 674
LIETA PILAVD +G VNGWN+K AELTGL V +A+G +LV DLV +SV+ V+ ML +
Sbjct: 527 LIETATAPILAVDYNGCVNGWNAKVAELTGLPVGEAMGMSLVQDLVFEESVESVEKMLYN 586
Query: 675 AF 676
A
Sbjct: 587 AL 588
>gi|78643934|emb|CAJ21330.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 862 bits (2226), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/680 (61%), Positives = 514/680 (75%), Gaps = 13/680 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQA RFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQAPRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHNQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSA 675
V DLV + ++V ++ A
Sbjct: 672 VHDLVYKEYEEIVDKLIHRA 691
>gi|78643924|emb|CAJ21325.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 861 bits (2225), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/680 (61%), Positives = 513/680 (75%), Gaps = 13/680 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DE +F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEHSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAHYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSTRCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHNQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSA 675
V DLV + ++V ++ A
Sbjct: 672 VHDLVYKEYEEIVDKLIHRA 691
>gi|78643888|emb|CAJ21307.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 861 bits (2224), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/680 (61%), Positives = 514/680 (75%), Gaps = 13/680 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
++P ++AYL ++QRG IQPFGCM A DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSLPEEQITAYLSKIQRGGHIQPFGCMSAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHTQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSA 675
V DLV + ++V ++ A
Sbjct: 672 VHDLVYKEYEEIVDKLIHRA 691
>gi|406685527|gb|AFS51204.1| phytochrome P, partial [Microcachrys tetragona]
Length = 657
Score = 861 bits (2224), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/617 (67%), Positives = 496/617 (80%), Gaps = 8/617 (1%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE--QQDALTLG 123
AYL R+QRG IQPFGCM+AV+E NF ++ +S+NA EMLDL P +VP +E + LT+G
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETNFKIIAFSQNALEMLDLMPQSVPTMEVGKGAVLTIG 60
Query: 124 IDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVN 183
DVRTLFT S A AL+KAA +++L+NPI +H + + KPF AI+HRIDVG+VIDLEP+
Sbjct: 61 TDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSQYTRKPFNAIVHRIDVGIVIDLEPLR 120
Query: 184 PDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHE 243
D ++ AGA++S KLA +AISR QSLPSG++ LLCD +V +V +LTGYDRVMVYKFHE
Sbjct: 121 TGDAAMSTAGAVQSQKLAVRAISRPQSLPSGDVGLLCDTVVEDVRELTGYDRVMVYKFHE 180
Query: 244 DEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKL 303
DEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMI DC A PV VIQ ++L
Sbjct: 181 DEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMIYDCTATPVNVIQSEEL 240
Query: 304 DQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR---KLWGL 360
QPL L GSTLRAPH CHA+YM NMGSIASLVM+V IN +DE GR KLWGL
Sbjct: 241 RQPLCLVGSTLRAPHRCHAQYMANMGSIASLVMAVIINGNDDE--GGGTSGRSSMKLWGL 298
Query: 361 VVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDS 420
VVCHHTSPR V FPLRYACEFL+Q FG+Q+N E++L+AQ EKHILRTQT+LCDMLLRD+
Sbjct: 299 VVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQWTEKHILRTQTLLCDMLLRDA 358
Query: 421 PVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTD 480
P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIAEWLL++H STGLSTD
Sbjct: 359 PIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLQHHGDSTGLSTD 418
Query: 481 SLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKM 540
SL +AGYPGA +LGDAVCG+AA +ITS+DFLFWFRSHTAKE+KWGGAKH KD GR+M
Sbjct: 419 SLADAGYPGAASLGDAVCGMAAARITSRDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRM 478
Query: 541 HPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRI 600
HPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+ D ++
Sbjct: 479 HPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSHTKTMVHARLNDLKL 538
Query: 601 EKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVD-L 659
+ IDEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+G +LV L
Sbjct: 539 QGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLVHYL 598
Query: 660 VAGDSVDVVKNMLSSAF 676
V +S + V+ ML A
Sbjct: 599 VFEESAESVEKMLDRAL 615
>gi|225431962|ref|XP_002278263.1| PREDICTED: phytochrome B-like [Vitis vinifera]
Length = 1129
Score = 860 bits (2222), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/689 (61%), Positives = 522/689 (75%), Gaps = 23/689 (3%)
Query: 3 SKSTNKTNYSRSSSAR---SKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISS 54
++S ++ S +S+ R + ++ AQ ++DA+L +++S FDYS SV +
Sbjct: 8 TQSHHQAQSSGTSNLRVYHTDSMSKAIAQYTMDARLHAVYEQSGESGKSFDYSQSVR--T 65
Query: 55 STSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNI 114
+T +VP ++AYL ++QRG IQPFGCM+AVDE F V+ +SENA EML L P +VP++
Sbjct: 66 TTQSVPEQQITAYLSKIQRGGHIQPFGCMLAVDEATFRVIAFSENAREMLGLTPQSVPSL 125
Query: 115 EQQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
E+ + L +G DVRTLFT S A L+KA E+ LLNP+ IH K SGKPFYAILHRIDVG
Sbjct: 126 EKPEILLVGTDVRTLFTPSSAVLLEKAFGAREITLLNPVWIHSKNSGKPFYAILHRIDVG 185
Query: 175 LVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYD 234
+VIDLEP +D ++ AGA++S KLA +AIS LQSLP G+I+LLC+ +V V +LTGYD
Sbjct: 186 IVIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDINLLCETVVENVRELTGYD 245
Query: 235 RVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPP 294
RVMVYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A P
Sbjct: 246 RVMVYKFHEDEHGEVVAESKRSDLEPYIGLHYPATDIPQASRFLFRQNRVRMIVDCHATP 305
Query: 295 VKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ- 353
V VIQD+ L QPL L GSTLRAPHGCHA+YM NMGS ASL M+V IN ND+E
Sbjct: 306 VLVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSTASLAMAVIIN------GNDEEAI 359
Query: 354 -GR---KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQ 409
GR +LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQ
Sbjct: 360 GGRNLMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHVLRTQ 419
Query: 410 TVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLE 469
T+LCDMLLRDSP GIVTQ+P++MDLVKCDGAALY +GK + GVTPTE QIKDIAEWLL
Sbjct: 420 TLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYCQGKYYPTGVTPTEAQIKDIAEWLLA 479
Query: 470 YHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKH 529
H STGLSTDSL +AGYPGA +LGDAVCG+A ITS+DFLFWFRSHTAKEIKWGGAKH
Sbjct: 480 NHADSTGLSTDSLADAGYPGAASLGDAVCGMAVAYITSRDFLFWFRSHTAKEIKWGGAKH 539
Query: 530 DSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEV-AEDSK 588
KD G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D +SK
Sbjct: 540 HPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFKDATDGSNSK 599
Query: 589 MIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTV 648
+++ + ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V
Sbjct: 600 AVMHAQLGELELQGMDELSSVAREMVRLIETATAPIFAVDVDGCINGWNAKVAELTGLSV 659
Query: 649 DQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
++A+G +LV DLV +S + V +L A
Sbjct: 660 EEAMGKSLVHDLVYKESEETVDKLLHHAL 688
>gi|78643920|emb|CAJ21323.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 860 bits (2222), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/680 (61%), Positives = 514/680 (75%), Gaps = 13/680 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDS GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSHTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHNQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSA 675
V DLV + ++V ++ A
Sbjct: 672 VHDLVYKEYEEIVDKLIHRA 691
>gi|401782504|dbj|BAM36555.1| phytochrome B [Fragaria x ananassa]
Length = 1136
Score = 860 bits (2221), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/670 (61%), Positives = 515/670 (76%), Gaps = 8/670 (1%)
Query: 12 SRSSSARSKQNARVAAQTSIDAKLAEDFDESD----FDYSTSVNISSSTSNVPSSTVSAY 67
+R+S+A ++ ++ AQ ++DA+L F++S+ FDYS S+ S+ +VP ++AY
Sbjct: 28 NRNSTAAAESVSKAVAQYTVDARLHAVFEQSESGKSFDYSQSMR--STKDSVPEKQITAY 85
Query: 68 LQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVR 127
L ++QRG IQPFGC IAVDE F V+ YSENA ++LD+ P +VP ++ ++ LT+G D R
Sbjct: 86 LSKIQRGGHIQPFGCTIAVDESTFAVIAYSENARDLLDMMPQSVPVMQSREILTVGTDFR 145
Query: 128 TLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDV 187
TLF+ S + L++A E+ LLNPI IH K SGKPFYAILHRIDVG+VIDLEP +D
Sbjct: 146 TLFSPSSSTLLEQAFGAREITLLNPIWIHSKISGKPFYAILHRIDVGVVIDLEPARSEDP 205
Query: 188 PVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHG 247
++ AGA++S KLA +AIS+LQSLP G+I LLCD +V V +LTGYDRVMVYKFHEDEHG
Sbjct: 206 ALSIAGAVQSQKLAVRAISKLQSLPGGDIKLLCDTVVESVRELTGYDRVMVYKFHEDEHG 265
Query: 248 EVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPL 307
EV+AE +R DLEPYLG HYPATDIPQASRFL +N+VRMI DC A PV+VIQD+ L QPL
Sbjct: 266 EVLAESKRADLEPYLGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVQVIQDEGLMQPL 325
Query: 308 SLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTS 367
L GSTLRAPHGCH++YM NMGSIASL ++V IN +DE + R LWGLVVCHHTS
Sbjct: 326 CLVGSTLRAPHGCHSQYMANMGSIASLALAVIINGNDDEAIGGRSSMR-LWGLVVCHHTS 384
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
R +PFPLRYACEFL+Q FG+Q+N E++L+AQL EKH+LRTQT+LCDMLLRD+P GIVTQ
Sbjct: 385 ARCIPFPLRYACEFLMQAFGLQLNMELQLAAQLLEKHVLRTQTLLCDMLLRDTPTGIVTQ 444
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++M+LVKCDGAALYY+ K + +GVTPTE QIKDI EWLL H STGLSTDSL +AGY
Sbjct: 445 SPSIMNLVKCDGAALYYQDKYYPVGVTPTEAQIKDIVEWLLSSHGTSTGLSTDSLGDAGY 504
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGA +LGDAVCG+AA IT +DFLFWFRSHTAKE+KWGGAKH KD G++MHPRSSFK
Sbjct: 505 PGAASLGDAVCGMAAAYITKRDFLFWFRSHTAKEVKWGGAKHHPEDKDDGQRMHPRSSFK 564
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELR 607
AFLEVVK RSLPW++ EMDAIHSLQ+ILR S +D + K + D I+ IDEL
Sbjct: 565 AFLEVVKSRSLPWDNAEMDAIHSLQIILRDSFKDAETNNLKAVTENQHGDLEIQGIDELS 624
Query: 608 IITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVD 666
+ EMVRLIETA PI AVD +G +NGWN+K AELTGL V++A G +LV DLV +S +
Sbjct: 625 SVAREMVRLIETATAPIFAVDVNGCINGWNAKIAELTGLAVEEATGKSLVHDLVYKESEE 684
Query: 667 VVKNMLSSAF 676
+V +L A
Sbjct: 685 IVDKLLIHAL 694
>gi|78643940|emb|CAJ21333.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 858 bits (2218), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/680 (61%), Positives = 513/680 (75%), Gaps = 13/680 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA +EQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAANEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQA RFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQAPRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAHYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHNQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSA 675
V DLV + ++V ++ A
Sbjct: 672 VHDLVYKEYEEIVDKLIHRA 691
>gi|406685487|gb|AFS51184.1| phytochrome P, partial [Acmopyle pancheri]
Length = 638
Score = 858 bits (2217), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/615 (67%), Positives = 493/615 (80%), Gaps = 18/615 (2%)
Query: 74 GRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE----QQDALTLGIDVRTL 129
G IQPFGCM+AV+E NF ++ YS+NA EMLD P +VP +E LT+G DVRTL
Sbjct: 1 GGTIQPFGCMLAVEETNFKIIAYSQNALEMLDPMPQSVPTMELGKHGGSILTIGTDVRTL 60
Query: 130 FTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPV 189
FT S A AL+KAA +++L+NPI +H + +GKPF AI+HRIDVG+VIDLEP+ D +
Sbjct: 61 FTPSSARALEKAAMAPDISLMNPIWVHSQYTGKPFNAIVHRIDVGIVIDLEPLRTGDAAM 120
Query: 190 TAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEV 249
+ AGA++S KLA +AISRLQSLP+G+I LLCD +V +V +LTGYDRVMVYKFHEDEHGEV
Sbjct: 121 STAGAVQSQKLAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVMVYKFHEDEHGEV 180
Query: 250 VAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSL 309
VAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMI DC A PVKVIQ ++L QPL L
Sbjct: 181 VAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMIFDCSATPVKVIQSEELRQPLCL 240
Query: 310 CGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG-------RKLWGLVV 362
GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G KLWGLVV
Sbjct: 241 VGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGLSGRSSMKLWGLVV 294
Query: 363 CHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPV 422
CHHTSPR V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LCDMLLRD+P+
Sbjct: 295 CHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRDAPI 354
Query: 423 GIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSL 482
GIVTQ+P++MDLVKCDGAALYY W LGVTPTE QIKDIAEWLLEYH STGLSTDSL
Sbjct: 355 GIVTQSPSIMDLVKCDGAALYYGCTTWCLGVTPTEAQIKDIAEWLLEYHGDSTGLSTDSL 414
Query: 483 VEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHP 542
+AGYPGA +LGDAVCG+AA +ITSKD+LFW+RSHTAKE+KWGGAKH KD GR+MHP
Sbjct: 415 ADAGYPGAASLGDAVCGMAAARITSKDYLFWYRSHTAKEMKWGGAKHHPDDKDDGRRMHP 474
Query: 543 RSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEK 602
RSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD D+K +V+ D +++
Sbjct: 475 RSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSDTKTMVHARLNDLKLQG 534
Query: 603 IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVA 661
IDEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+G +LV DLV
Sbjct: 535 IDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGKSLVHDLVL 594
Query: 662 GDSVDVVKNMLSSAF 676
+S + V+ ML A
Sbjct: 595 EESAECVEKMLYRAL 609
>gi|339778383|gb|AEK06073.1| phytochrome B2 [Populus balsamifera]
gi|339778385|gb|AEK06074.1| phytochrome B2 [Populus balsamifera]
Length = 1103
Score = 857 bits (2215), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/635 (64%), Positives = 495/635 (77%), Gaps = 8/635 (1%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDYS SV ++ +VP ++AYL ++QRG I
Sbjct: 5 SKAIAQYTVDAQLHAVFEQSGGTGRSFDYSKSVR--TTNQSVPEQQITAYLSKIQRGGHI 62
Query: 78 QPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAA 137
QPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+Q+ L +G DVR LF S A
Sbjct: 63 QPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEKQEILFVGADVRILFRPSSAVL 122
Query: 138 LQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKS 197
L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+VIDLEP +D ++ AGA++S
Sbjct: 123 LEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQS 182
Query: 198 YKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPD 257
KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRVMVYKFHEDEHGEVVAE +R D
Sbjct: 183 QKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVD 242
Query: 258 LEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAP 317
LEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV+VIQD+ L QPL L GSTLRAP
Sbjct: 243 LEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVRVIQDEALMQPLCLVGSTLRAP 302
Query: 318 HGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRY 377
HGCHA+YMENMGSIASL M+V I ++E + R LWGLVVCHHTS R +PFPLRY
Sbjct: 303 HGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR-LWGLVVCHHTSARCIPFPLRY 361
Query: 378 ACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKC 437
ACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDMLLRDSP GIVTQ+P++MDLVKC
Sbjct: 362 ACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKC 421
Query: 438 DGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAV 497
DGAALYY+G+ + LGVTPTE QIKDI EWLL H TGLSTDSL +AGYPGA LGDAV
Sbjct: 422 DGAALYYQGQYYPLGVTPTEXQIKDIVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAV 481
Query: 498 CGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRS 557
CG+A I +DFLFWFRSHTAKE+KWGGAKH KD G++MHPRSSFKAFLEVVK RS
Sbjct: 482 CGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRS 541
Query: 558 LPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLI 617
LPWE+ EMDAIHSLQLILR S +D A +SK +V+ D ++ +DEL + EMVRLI
Sbjct: 542 LPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHTQLKDMELQGMDELSSVAREMVRLI 601
Query: 618 ETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
ETA PI AVD G +NGWN+K AELTGL+V++A+
Sbjct: 602 ETATAPIFAVDVDGRINGWNAKVAELTGLSVEEAM 636
>gi|339778357|gb|AEK06060.1| phytochrome B2 [Populus balsamifera]
gi|339778359|gb|AEK06061.1| phytochrome B2 [Populus balsamifera]
gi|339778361|gb|AEK06062.1| phytochrome B2 [Populus balsamifera]
gi|339778363|gb|AEK06063.1| phytochrome B2 [Populus balsamifera]
gi|339778365|gb|AEK06064.1| phytochrome B2 [Populus balsamifera]
gi|339778367|gb|AEK06065.1| phytochrome B2 [Populus balsamifera]
gi|339778369|gb|AEK06066.1| phytochrome B2 [Populus balsamifera]
Length = 1103
Score = 857 bits (2215), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/635 (64%), Positives = 495/635 (77%), Gaps = 8/635 (1%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDYS SV ++ +VP ++AYL ++QRG I
Sbjct: 5 SKAIAQYTVDAQLHAVFEQSGGTGRSFDYSKSVR--TTNQSVPEQQITAYLSKIQRGGHI 62
Query: 78 QPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAA 137
QPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+Q+ L +G DVR LF S A
Sbjct: 63 QPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEKQEILFVGADVRILFRPSSAVL 122
Query: 138 LQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKS 197
L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+VIDLEP +D ++ AGA++S
Sbjct: 123 LEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQS 182
Query: 198 YKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPD 257
KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRVMVYKFHEDEHGEVVAE +R D
Sbjct: 183 QKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVD 242
Query: 258 LEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAP 317
LEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV+VIQD+ L QPL L GSTLRAP
Sbjct: 243 LEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVRVIQDEALMQPLCLVGSTLRAP 302
Query: 318 HGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRY 377
HGCHA+YMENMGSIASL M+V I ++E + R LWGLVVCHHTS R +PFPLRY
Sbjct: 303 HGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR-LWGLVVCHHTSARCIPFPLRY 361
Query: 378 ACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKC 437
ACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDMLLRDSP GIVTQ+P++MDLVKC
Sbjct: 362 ACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKC 421
Query: 438 DGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAV 497
DGAALYY+G+ + LGVTPTE QIKDI EWLL H TGLSTDSL +AGYPGA LGDAV
Sbjct: 422 DGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAV 481
Query: 498 CGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRS 557
CG+A I +DFLFWFRSHTAKE+KWGGAKH KD G++MHPRSSFKAFLEVVK RS
Sbjct: 482 CGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRS 541
Query: 558 LPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLI 617
LPWE+ EMDAIHSLQLILR S +D A +SK +V+ D ++ +DEL + EMVRLI
Sbjct: 542 LPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHTQLKDMELQGMDELSSVAREMVRLI 601
Query: 618 ETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
ETA PI AVD G +NGWN+K AELTGL+V++A+
Sbjct: 602 ETATAPIFAVDVDGRINGWNAKVAELTGLSVEEAM 636
>gi|78643926|emb|CAJ21326.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 857 bits (2215), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/680 (61%), Positives = 512/680 (75%), Gaps = 13/680 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ GA++S KLA +AIS+LQSLP G+I LLCD +V+ V LTGYDRV
Sbjct: 193 IDLEPARTEDPALSITGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRGLTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDS GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSHTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHNQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVEGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSA 675
V DLV + ++V ++ A
Sbjct: 672 VHDLVYKEYEEIVDKLIHRA 691
>gi|406685449|gb|AFS51165.1| phytochrome P, partial [Agathis robusta]
Length = 655
Score = 857 bits (2214), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/628 (66%), Positives = 497/628 (79%), Gaps = 19/628 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDAL----- 120
AYL R+QRG IQPFGCM+AV+E F ++ YSENA EMLDL P +VPN+++ +A+
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFRIIAYSENALEMLDLMPQSVPNMDRDEAMGSHGG 60
Query: 121 ----TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
T+G DVR LFT A AL+KAA E++L+NPI +H + + KPFYAI+HRIDVG+V
Sbjct: 61 RRVITIGTDVRALFTPESARALEKAAMAQEISLMNPIGVHSQNTNKPFYAIVHRIDVGMV 120
Query: 177 IDLEPVNPDDVPVTAAG-----ALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLT 231
IDLEPV AG +++S KLA +AISRLQS +G+I +LCD +V +V +LT
Sbjct: 121 IDLEPVRTGSGGGGVAGLAAAGSVQSQKLAVRAISRLQS--AGDIGVLCDTVVEDVRELT 178
Query: 232 GYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCL 291
GYDRVMVYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC
Sbjct: 179 GYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCR 238
Query: 292 APPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ 351
A PVKVIQ ++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN EDE
Sbjct: 239 AAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEGGGSG 298
Query: 352 EQGR--KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQ 409
KLWGLVVCHHTSPR VPFPLRYACEFL+Q FG+Q+N E++++AQL EKHILRTQ
Sbjct: 299 SGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQVAAQLTEKHILRTQ 358
Query: 410 TVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLE 469
T+LCDMLLRD+P+GIVT +P++MDLVKCDGAALYY G W+LGVTPTE QIKDIA+WLLE
Sbjct: 359 TLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLE 418
Query: 470 YHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKH 529
YH STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 419 YHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKH 478
Query: 530 DSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKM 589
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD ++K
Sbjct: 479 HPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSNTKT 538
Query: 590 IVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVD 649
+V+ D +++ IDEL + +EMVRLIETA PILAVD++G +NGWN+K AELTGL V
Sbjct: 539 MVHGRLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAELTGLPVG 598
Query: 650 QAIGTALV-DLVAGDSVDVVKNMLSSAF 676
+A+G +LV DL+ +S D V ML A
Sbjct: 599 EAMGKSLVHDLIFHESADTVDKMLCRAL 626
>gi|78643928|emb|CAJ21327.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 857 bits (2214), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/680 (61%), Positives = 513/680 (75%), Gaps = 13/680 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSTTCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDS GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSHTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHNQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSA 675
V DLV + ++V ++ A
Sbjct: 672 VHDLVYKEYEEIVDKLIHRA 691
>gi|309256333|gb|ADO60994.1| phytochrome b [Helianthus annuus]
Length = 683
Score = 857 bits (2214), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/669 (61%), Positives = 508/669 (75%), Gaps = 10/669 (1%)
Query: 14 SSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYL 68
S+SAR ++ AQ ++DA+L +++S FDYS S I ++T ++ ++AYL
Sbjct: 4 STSARVDSMSKAIAQYALDARLHAVYEQSGESGKSFDYSQS--IKTTTDSIAEQQMTAYL 61
Query: 69 QRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRT 128
++QRG IQPFGCMIA+D F V+ +SENA E L LAP +VP++++ + LT+G DV+T
Sbjct: 62 SKIQRGGHIQPFGCMIAIDNTTFRVIAFSENARERLGLAPQSVPSLDKPEILTIGTDVKT 121
Query: 129 LFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVP 188
LFT S A L++A E+ LLNP+ +H K SGKPFYAILHRIDVG+VIDLEP +D
Sbjct: 122 LFTPSSALLLERAFRAREITLLNPVWVHSKNSGKPFYAILHRIDVGIVIDLEPARTEDPA 181
Query: 189 VTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGE 248
++ AGA++S KLA +AIS LQ+LP G+I LLCD +V V +LTGYDRVMVYKFHEDEHGE
Sbjct: 182 LSIAGAVQSQKLAVRAISNLQALPGGDIKLLCDTVVQNVRELTGYDRVMVYKFHEDEHGE 241
Query: 249 VVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLS 308
VVAE +RPDL+PY+G HYPATDIPQASRFL +N+VRMI DC A PV+V+QD L QPL
Sbjct: 242 VVAESKRPDLDPYIGLHYPATDIPQASRFLFRQNRVRMIVDCHANPVRVVQDDNLMQPLC 301
Query: 309 LCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSP 368
L GSTLRAPHGCHA+YM NMGSIASL ++V IN ED G LWGLVVCHHTS
Sbjct: 302 LVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNEDGASGRGTMG--LWGLVVCHHTSA 359
Query: 369 RFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQT 428
R +PFPLRYACEFL+Q FG+Q+N E++L++Q+ EK ILRTQT+LCDM+LRDSP GIVTQ+
Sbjct: 360 RCIPFPLRYACEFLMQAFGLQLNLELQLASQMLEKRILRTQTLLCDMILRDSPTGIVTQS 419
Query: 429 PNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYP 488
P++MDLVKCDGAALYY+ K + LG+TPTE QIKDI EWL H STGLSTDSL +AGYP
Sbjct: 420 PSIMDLVKCDGAALYYQEKYYPLGITPTESQIKDIVEWLSACHTDSTGLSTDSLADAGYP 479
Query: 489 GALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKA 548
GA +LGDAVCG+A ITSKDFLFWFRSHTAKEIKWGGAKH KD G++MHPRSSF A
Sbjct: 480 GAASLGDAVCGMAVAYITSKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFNA 539
Query: 549 FLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRI 608
FLEVVK RS PWE+ EMDAIHSLQLILR S +D +SK +V V + +E +DEL
Sbjct: 540 FLEVVKSRSSPWENAEMDAIHSLQLILRDSFKDPDENNSKAVVKVQMEEMGLEGVDELSS 599
Query: 609 ITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDV 667
+ EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +LV DL+ +S +
Sbjct: 600 VAREMVRLIETATAPIFAVDVEGRINGWNAKIAELTGLSVNEAMGKSLVRDLIYKESEET 659
Query: 668 VKNMLSSAF 676
V +L A
Sbjct: 660 VTKLLDHAL 668
>gi|356555997|ref|XP_003546314.1| PREDICTED: phytochrome B-like isoform 1 [Glycine max]
Length = 1149
Score = 857 bits (2213), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/663 (62%), Positives = 509/663 (76%), Gaps = 11/663 (1%)
Query: 22 NARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRL 76
++ AQ + DA+L F++S FDYS S+ ++S + VP ++AYL ++QRG
Sbjct: 50 TSKAIAQYTEDARLHAVFEQSGESGRSFDYSQSIRVTSES--VPEQQITAYLLKIQRGGF 107
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD--ALTLGIDVRTLFTSSG 134
IQPFG MIAVDE +F +L YS+NA +ML + P +VP+++ ++ A LG D+RTLFT S
Sbjct: 108 IQPFGSMIAVDEPSFRILAYSDNARDMLGITPQSVPSLDDKNDAAFALGTDIRTLFTHSS 167
Query: 135 AAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGA 194
A L+KA + E++L+NPI IH +TSGKPFY ILHRIDVG+VIDLEP +D ++ AGA
Sbjct: 168 AVLLEKAFSAREISLMNPIWIHSRTSGKPFYGILHRIDVGIVIDLEPARTEDPALSIAGA 227
Query: 195 LKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECR 254
++S KLA +AIS+LQSLP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE +
Sbjct: 228 VQSQKLAVRAISQLQSLPGGDVKLLCDTVVESVRELTGYDRVMVYRFHEDEHGEVVAETK 287
Query: 255 RPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTL 314
RPDLEPY+G HYPATDIPQASRFL +N+VRMI DC A V+V+QD+ L QPL L GSTL
Sbjct: 288 RPDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHASAVRVVQDEALVQPLCLVGSTL 347
Query: 315 RAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFP 374
RAPHGCHA+YM NMGS ASLVM+V IN DE +LWGLVVCHHTS R +PFP
Sbjct: 348 RAPHGCHAQYMANMGSTASLVMAVIIN-GNDEEGVGGRTSMRLWGLVVCHHTSARCIPFP 406
Query: 375 LRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDL 434
LRYACEFL+Q FG+Q+N E++L+AQ EK +LRTQT+LCDMLLRDSP GIVTQ+P++MDL
Sbjct: 407 LRYACEFLMQAFGLQLNMELQLAAQSLEKRVLRTQTLLCDMLLRDSPTGIVTQSPSIMDL 466
Query: 435 VKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALG 494
VKCDGAALYY+G + LGVTPTE QI+DI EWLL +HR STGLSTDSL +AGYPGA +LG
Sbjct: 467 VKCDGAALYYQGNYYPLGVTPTEAQIRDIIEWLLAFHRDSTGLSTDSLADAGYPGAASLG 526
Query: 495 DAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVK 554
DAVCG+A IT KDFLFWFRSHTAKEIKWGGAKH KD G++MHPRSSFKAFLEVVK
Sbjct: 527 DAVCGMAVAYITEKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVK 586
Query: 555 QRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMV 614
RSLPWE+ EMDAIHSLQLILR S +D +SK +++ + ++ +DEL + EMV
Sbjct: 587 SRSLPWENAEMDAIHSLQLILRDSFKDAEHSNSKAVLDPRMSELELQGVDELSSVAREMV 646
Query: 615 RLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLS 673
RLIETA PI AVD G +NGWN+K +ELTGL V++A+G +LV DLV +S + V +LS
Sbjct: 647 RLIETATAPIFAVDVDGRINGWNAKVSELTGLPVEEAMGKSLVRDLVFKESEETVDKLLS 706
Query: 674 SAF 676
A
Sbjct: 707 RAL 709
>gi|406685441|gb|AFS51161.1| phytochrome P, partial [Agathis macrophylla]
Length = 655
Score = 856 bits (2212), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/628 (66%), Positives = 496/628 (78%), Gaps = 19/628 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDAL----- 120
AYL R+QRG IQPFGCM+AV+E F V+ YSENA EMLDL P +VPN+++++A+
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFRVIAYSENALEMLDLMPQSVPNMDREEAMGSHGG 60
Query: 121 ----TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
T+G DVR LFT A AL+KAA E++L+NPI +H + + KPFYAI+HRIDVG+V
Sbjct: 61 RRVITIGTDVRALFTPESARALEKAAMAQEISLMNPIGVHSQNTNKPFYAIVHRIDVGMV 120
Query: 177 IDLEPVNPDDVPVTAAG-----ALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLT 231
IDLEPV G +++S KLA +AISRLQS +G+I +LCD +V +V +LT
Sbjct: 121 IDLEPVRTGSGGGGVGGLAAAGSVQSQKLAVRAISRLQS--AGDIGVLCDTVVEDVRELT 178
Query: 232 GYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCL 291
GYDRVMVYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC
Sbjct: 179 GYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCR 238
Query: 292 APPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ 351
A PVKVIQ ++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN EDE
Sbjct: 239 AAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEGGGSG 298
Query: 352 EQGR--KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQ 409
KLWGLVVCHHTSPR VPFPLRYACEFL+Q FG+Q+N E++++AQL EKHILRTQ
Sbjct: 299 SGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQVAAQLTEKHILRTQ 358
Query: 410 TVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLE 469
T+LCDMLLRD+P+GIVT +P++MDLVKCDGAALYY G W+LGVTPTE QIKDIA+WLLE
Sbjct: 359 TLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLE 418
Query: 470 YHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKH 529
YH STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFW RSHTAKE+KWGGAKH
Sbjct: 419 YHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWLRSHTAKEMKWGGAKH 478
Query: 530 DSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKM 589
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD ++K
Sbjct: 479 HPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSNTKT 538
Query: 590 IVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVD 649
+V+ D +++ IDEL + +EMVRLIETA PILAVD++G +NGWN+K AELTGL V
Sbjct: 539 MVHGRLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAELTGLPVG 598
Query: 650 QAIGTALV-DLVAGDSVDVVKNMLSSAF 676
+A+G +LV DL+ +S D V ML A
Sbjct: 599 EAMGKSLVHDLIFHESADTVDKMLCHAL 626
>gi|312231795|gb|ACE79199.2| phytochrome B-2 [Glycine max]
Length = 1149
Score = 856 bits (2212), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/663 (61%), Positives = 509/663 (76%), Gaps = 11/663 (1%)
Query: 22 NARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRL 76
++ AQ + DA+L F++S FDYS S+ ++S + VP ++AYL ++QRG
Sbjct: 50 TSKAIAQYTEDARLHAVFEQSGESGRSFDYSQSIRVTSES--VPEQQITAYLLKIQRGGF 107
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD--ALTLGIDVRTLFTSSG 134
IQPFG MIAVDE +F +L YS+NA +ML + P +VP+++ ++ A LG D+RTLFT S
Sbjct: 108 IQPFGSMIAVDEPSFRILAYSDNARDMLGITPQSVPSLDDKNDAAFALGTDIRTLFTHSS 167
Query: 135 AAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGA 194
A L+KA + E++L+NPI IH +TSGKPFY ILHRIDVG+VIDLEP +D ++ AGA
Sbjct: 168 AVLLEKAFSAREISLMNPIWIHSRTSGKPFYGILHRIDVGIVIDLEPARTEDPALSIAGA 227
Query: 195 LKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECR 254
++S KLA +AIS+LQSLP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE +
Sbjct: 228 VQSQKLAVRAISQLQSLPGGDVKLLCDTVVESVRELTGYDRVMVYRFHEDEHGEVVAETK 287
Query: 255 RPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTL 314
RPDLEPY+G HYPATDIPQASRFL +N+VRMI DC A V+V+QD+ L QPL L GSTL
Sbjct: 288 RPDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHASAVRVVQDEALVQPLCLVGSTL 347
Query: 315 RAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFP 374
RAPHGCHA+YM NMGS ASLVM+V IN DE +LWGLV+CHHTS R +PFP
Sbjct: 348 RAPHGCHAQYMANMGSTASLVMAVIIN-GNDEEGVGGRTSMRLWGLVICHHTSARCIPFP 406
Query: 375 LRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDL 434
LRYACEFL+Q FG+Q+N E++L+AQ EK +LRTQT+LCDMLLRDSP GIVTQ+P++MDL
Sbjct: 407 LRYACEFLMQAFGLQLNMELQLAAQSLEKRVLRTQTLLCDMLLRDSPTGIVTQSPSIMDL 466
Query: 435 VKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALG 494
VKCDGAALYY+G + LGVTPTE QI+DI EWLL +HR STGLSTDSL +AGYPGA +LG
Sbjct: 467 VKCDGAALYYQGNYYPLGVTPTEAQIRDIIEWLLAFHRDSTGLSTDSLADAGYPGAASLG 526
Query: 495 DAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVK 554
DAVCG+A IT KDFLFWFRSHTAKEIKWGGAKH KD G++MHPRSSFKAFLEVVK
Sbjct: 527 DAVCGMAVAYITEKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVK 586
Query: 555 QRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMV 614
RSLPWE+ EMDAIHSLQLILR S +D +SK +++ + ++ +DEL + EMV
Sbjct: 587 SRSLPWENAEMDAIHSLQLILRDSFKDAEHSNSKAVLDPRMSELELQGVDELSSVAREMV 646
Query: 615 RLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLS 673
RLIETA PI AVD G +NGWN+K +ELTGL V++A+G +LV DLV +S + V +LS
Sbjct: 647 RLIETATAPIFAVDVDGRINGWNAKVSELTGLPVEEAMGKSLVRDLVFKESEETVDKLLS 706
Query: 674 SAF 676
A
Sbjct: 707 RAL 709
>gi|339778351|gb|AEK06057.1| phytochrome B2 [Populus balsamifera]
gi|339778353|gb|AEK06058.1| phytochrome B2 [Populus balsamifera]
gi|339778355|gb|AEK06059.1| phytochrome B2 [Populus balsamifera]
Length = 1103
Score = 856 bits (2211), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/635 (64%), Positives = 495/635 (77%), Gaps = 8/635 (1%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDYS SV ++ +VP ++AYL ++QRG I
Sbjct: 5 SKAIAQYTVDAQLHAVFEQSGGTGRSFDYSKSVR--TTNQSVPEQQITAYLSKIQRGGHI 62
Query: 78 QPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAA 137
QPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+Q+ L +G DVR LF S A
Sbjct: 63 QPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEKQEILFVGADVRILFRPSSAVL 122
Query: 138 LQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKS 197
L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+VIDLEP +D ++ AGA++S
Sbjct: 123 LEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQS 182
Query: 198 YKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPD 257
KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRVMVYKFHEDEHGEVVAE +R D
Sbjct: 183 QKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVD 242
Query: 258 LEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAP 317
LEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV+VIQD+ L QPL L GSTLRAP
Sbjct: 243 LEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVRVIQDEALMQPLCLVGSTLRAP 302
Query: 318 HGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRY 377
HGCHA+YMENMGSIASL M+V I ++E + R LWGLVVCHHTS R +PFPLRY
Sbjct: 303 HGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR-LWGLVVCHHTSARCIPFPLRY 361
Query: 378 ACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKC 437
ACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDMLLR+SP GIVTQ+P++MDLVKC
Sbjct: 362 ACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDMLLRESPTGIVTQSPSIMDLVKC 421
Query: 438 DGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAV 497
DGAALYY+G+ + LGVTPTE QIKDI EWLL H TGLSTDSL +AGYPGA LGDAV
Sbjct: 422 DGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAV 481
Query: 498 CGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRS 557
CG+A I +DFLFWFRSHTAKE+KWGGAKH KD G++MHPRSSFKAFLEVVK RS
Sbjct: 482 CGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRS 541
Query: 558 LPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLI 617
LPWE+ EMDAIHSLQLILR S +D A +SK +V+ D ++ +DEL + EMVRLI
Sbjct: 542 LPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHTQLKDMELQGMDELSSVAREMVRLI 601
Query: 618 ETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
ETA PI AVD G +NGWN+K AELTGL+V++A+
Sbjct: 602 ETATAPIFAVDVDGRINGWNAKVAELTGLSVEEAM 636
>gi|406685485|gb|AFS51183.1| phytochrome P, partial [Wollemia nobilis]
Length = 677
Score = 856 bits (2211), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/635 (66%), Positives = 497/635 (78%), Gaps = 24/635 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE--QQDAL--- 120
AYL R+QRG IQPFGCM+AV+E F ++ YSENA EMLDL +VPN++ + DA+
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFRIIAYSENAVEMLDLMSQSVPNMDMDRDDAMGSH 60
Query: 121 ------TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
T+G DVR LFT + A AL+KAA E++L+NPI +H K + KPFYAI+HRIDVG
Sbjct: 61 GGGRVITIGTDVRALFTPASAWALEKAAMAQEISLMNPIWVHSKNTNKPFYAIVHRIDVG 120
Query: 175 LVIDLEPVNPDDVPVTAAGA-----LKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSD 229
+VIDLEPV AG ++S KLA +AISRLQSLP+G+I +LCD +V +V +
Sbjct: 121 MVIDLEPVRTGSGGGGDAGLSAAGAVQSQKLAVRAISRLQSLPAGDIGVLCDAVVEDVRE 180
Query: 230 LTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICD 289
LTGYDRVMVYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICD
Sbjct: 181 LTGYDRVMVYKFHEDEHGEVVAEMRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICD 240
Query: 290 CLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN 349
C A PVKVIQ ++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN EDE
Sbjct: 241 CRAAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEGGG 300
Query: 350 DQEQGR-------KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLRE 402
G KLWGLVVCHHTSPR VPFPLRYACEFL+Q FG+Q+N E++L+AQL E
Sbjct: 301 GSGSGSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLME 360
Query: 403 KHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKD 462
KHILRTQT+LCDMLLRD+P+GI+T +P+ MDLVKCDGAALYY G W+LGVTPTE QIKD
Sbjct: 361 KHILRTQTLLCDMLLRDAPIGILTHSPSTMDLVKCDGAALYYGGMCWMLGVTPTEAQIKD 420
Query: 463 IAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEI 522
IA+WLLEYH STGLSTDSL +A YPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+
Sbjct: 421 IADWLLEYHGDSTGLSTDSLADADYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEM 480
Query: 523 KWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDE 582
KWGGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD
Sbjct: 481 KWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDI 540
Query: 583 VAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAE 642
++K +V+ D +++ IDEL + +EMVRLIETA PILAVD++G +NGWN+K AE
Sbjct: 541 DDSNTKTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAE 600
Query: 643 LTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
LTGL V +A+G +LV DL+ +S D + ML A
Sbjct: 601 LTGLPVGEAMGKSLVHDLIFHESADTMDKMLYHAL 635
>gi|37926849|gb|AAP06787.1| phytochrome A1 apoprotein [Zea mays]
gi|414872502|tpg|DAA51059.1| TPA: phytochromeA1 [Zea mays]
Length = 1131
Score = 855 bits (2210), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/666 (62%), Positives = 503/666 (75%), Gaps = 12/666 (1%)
Query: 23 ARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSST---SNVPSSTVSAYLQRVQRGRLI 77
AR+ AQT++DA+L +++ES FDYS V ST S V AYLQ +QRG+LI
Sbjct: 22 ARILAQTTLDAELNAEYEESGDSFDYSKLVEAQRSTPPEQQGRSGKVIAYLQHIQRGKLI 81
Query: 78 QPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAA 137
QPFGC++A+DE++F V+ +SENAPEML HAVPN++ L +G +VR+LFT GA A
Sbjct: 82 QPFGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLGIGTNVRSLFTDPGATA 141
Query: 138 LQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKS 197
LQKA F +V+LLNPIL+ CKTSGKPFYAI+HR LV+D EPV P + P TAAGAL+S
Sbjct: 142 LQKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQS 201
Query: 198 YKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPD 257
YKLAAKAIS++QSLP G++ LC+ +V EV DLTGYDRVM YKFHEDEHGEV AE +P
Sbjct: 202 YKLAAKAISKIQSLPGGSMQALCNTVVKEVFDLTGYDRVMAYKFHEDEHGEVFAEITKPG 261
Query: 258 LEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAP 317
+EPYLG HYPATDIPQA+RFL MKNKVRMICDC A VK+I+D+ L +SLCGSTLRAP
Sbjct: 262 IEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRARSVKIIEDEALSIDISLCGSTLRAP 321
Query: 318 HGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ------GRKLWGLVVCHHTSPRFV 371
H CH +YMENM SIASLVM+V +NE ED+ + + EQ +KLWGL+VCHH SPR+V
Sbjct: 322 HSCHLQYMENMNSIASLVMAVVVNENEDDDEPESEQPPQQQKRKKLWGLIVCHHESPRYV 381
Query: 372 PFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD-SPVGIVTQTPN 430
PFPLRYACEFL QVF V VNKE EL Q+REK ILR QT+L DML ++ SP+ IV+ +PN
Sbjct: 382 PFPLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKESSPLSIVSGSPN 441
Query: 431 VMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGA 490
+MDLVKCDGAAL Y K+W L PTE QI+DIA WL E H STGLSTDSL +AGYPGA
Sbjct: 442 IMDLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDAGYPGA 501
Query: 491 LALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFL 550
+LGD +CG+A KITSKD LFWFRSHTA EIKWGGAKHD +D R+MHPR SFKAFL
Sbjct: 502 ASLGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDEDDSRRMHPRLSFKAFL 561
Query: 551 EVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIIT 610
EVVK +SLPW D EMDAIHSLQLILRG+L D + ++ D +++ + EL+ +T
Sbjct: 562 EVVKMKSLPWSDYEMDAIHSLQLILRGTLNDALKPAQSSGLDNQIGDLKLDGLAELQAVT 621
Query: 611 NEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKN 670
+EMVRL+ETA VPILAVD +G VNGWN K A+L+GL VD+AIG ++ LV SV +V+
Sbjct: 622 SEMVRLMETATVPILAVDGNGLVNGWNQKVADLSGLRVDEAIGRHILTLVEDSSVPIVQR 681
Query: 671 MLSSAF 676
ML A
Sbjct: 682 MLYLAL 687
>gi|363547550|gb|AEW26818.1| phytochrome P [Cycas hainanensis]
Length = 589
Score = 855 bits (2209), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/601 (68%), Positives = 488/601 (81%), Gaps = 16/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCMIAV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMIAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPIL+ ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPILMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 F 676
Sbjct: 587 L 587
>gi|339778377|gb|AEK06070.1| phytochrome B2 [Populus balsamifera]
Length = 1103
Score = 855 bits (2209), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/635 (64%), Positives = 494/635 (77%), Gaps = 8/635 (1%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDYS SV ++ +VP ++AYL ++QRG I
Sbjct: 5 SKAIAQYTVDAQLHAVFEQSGGTGRSFDYSKSVR--TTNQSVPZQQITAYLSKIQRGGHI 62
Query: 78 QPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAA 137
QPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+Q+ L +G DVR LF S A
Sbjct: 63 QPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEKQEILFVGADVRILFRPSSAVL 122
Query: 138 LQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKS 197
L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+VIDLEP +D ++ AGA++S
Sbjct: 123 LEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQS 182
Query: 198 YKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPD 257
KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRVMVYKFHEDEHGEVVAE +R D
Sbjct: 183 QKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVD 242
Query: 258 LEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAP 317
LEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV+VIQD+ L QPL L GSTLRAP
Sbjct: 243 LEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVRVIQDEALMQPLCLVGSTLRAP 302
Query: 318 HGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRY 377
HGCHA+YMENMGSIASL M+V I ++E + R LWGLVVCHHTS R +PFPLRY
Sbjct: 303 HGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR-LWGLVVCHHTSARCIPFPLRY 361
Query: 378 ACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKC 437
ACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDMLLR SP GIVTQ+P++MDLVKC
Sbjct: 362 ACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDMLLRXSPTGIVTQSPSIMDLVKC 421
Query: 438 DGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAV 497
DGAALYY+G+ + LGVTPTE QIKDI EWLL H TGLSTDSL +AGYPGA LGDAV
Sbjct: 422 DGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAV 481
Query: 498 CGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRS 557
CG+A I +DFLFWFRSHTAKE+KWGGAKH KD G++MHPRSSFKAFLEVVK RS
Sbjct: 482 CGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRS 541
Query: 558 LPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLI 617
LPWE+ EMDAIHSLQLILR S +D A +SK +V+ D ++ +DEL + EMVRLI
Sbjct: 542 LPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHTQLKDMELQGMDELSSVAREMVRLI 601
Query: 618 ETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
ETA PI AVD G +NGWN+K AELTGL+V++A+
Sbjct: 602 ETATAPIFAVDVDGRINGWNAKVAELTGLSVEEAM 636
>gi|78643944|emb|CAJ21335.1| phytochrome B2 [Populus tremula]
Length = 1146
Score = 855 bits (2208), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/680 (61%), Positives = 511/680 (75%), Gaps = 13/680 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVK--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA +EQ+F + YSENA ML L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAANEQSFRGIAYSENAKNMLGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR F S A L+K E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGGDVRIFFRPSSAVLLEKTFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHNQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSA 675
V DLV + ++V ++ A
Sbjct: 672 VHDLVYKEYEEIVDKLIHRA 691
>gi|339778371|gb|AEK06067.1| phytochrome B2 [Populus balsamifera]
gi|339778373|gb|AEK06068.1| phytochrome B2 [Populus balsamifera]
gi|339778375|gb|AEK06069.1| phytochrome B2 [Populus balsamifera]
gi|339778379|gb|AEK06071.1| phytochrome B2 [Populus balsamifera]
gi|339778381|gb|AEK06072.1| phytochrome B2 [Populus balsamifera]
Length = 1103
Score = 855 bits (2208), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/635 (64%), Positives = 494/635 (77%), Gaps = 8/635 (1%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDYS SV ++ +VP ++AYL ++QRG I
Sbjct: 5 SKAIAQYTVDAQLHAVFEQSGGTGRSFDYSKSVR--TTNQSVPEQQITAYLSKIQRGGHI 62
Query: 78 QPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAA 137
QPFGCMIA DEQ+F V+ YSENA +ML L P +VP++E+Q+ L +G DVR LF S A
Sbjct: 63 QPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEKQEILFVGADVRILFRPSSAVL 122
Query: 138 LQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKS 197
L+KA E+ LLNPI IH K SGKPFYAILHRIDVG+VIDLEP +D ++ AGA++S
Sbjct: 123 LEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQS 182
Query: 198 YKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPD 257
KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRVMVYKFHEDEHGEVVAE +R D
Sbjct: 183 QKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVD 242
Query: 258 LEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAP 317
LEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV+VIQD+ L QPL L GSTLRAP
Sbjct: 243 LEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVRVIQDEALMQPLCLVGSTLRAP 302
Query: 318 HGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRY 377
HGCHA+YMENMGSIASL M+V I ++E + R LWGLVVCHHTS R +PFPLRY
Sbjct: 303 HGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR-LWGLVVCHHTSARCIPFPLRY 361
Query: 378 ACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKC 437
ACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDMLLR SP GIVTQ+P++MDLVKC
Sbjct: 362 ACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDMLLRXSPTGIVTQSPSIMDLVKC 421
Query: 438 DGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAV 497
DGAALYY+G+ + LGVTPTE QIKDI EWLL H TGLSTDSL +AGYPGA LGDAV
Sbjct: 422 DGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAV 481
Query: 498 CGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRS 557
CG+A I +DFLFWFRSHTAKE+KWGGAKH KD G++MHPRSSFKAFLEVVK RS
Sbjct: 482 CGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRS 541
Query: 558 LPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLI 617
LPWE+ EMDAIHSLQLILR S +D A +SK +V+ D ++ +DEL + EMVRLI
Sbjct: 542 LPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHTQLKDMELQGMDELSSVAREMVRLI 601
Query: 618 ETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
ETA PI AVD G +NGWN+K AELTGL+V++A+
Sbjct: 602 ETATAPIFAVDVDGRINGWNAKVAELTGLSVEEAM 636
>gi|358248221|ref|NP_001240097.1| phytochrome B-like [Glycine max]
gi|312231793|gb|ACE79198.2| phytochrome B-1 [Glycine max]
Length = 1137
Score = 854 bits (2207), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/662 (62%), Positives = 510/662 (77%), Gaps = 11/662 (1%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ + DA+L F++S F+YS S+ I+S + VP ++AYL ++QRG I
Sbjct: 39 SKAIAQYTEDARLHAVFEQSGESGRSFNYSESIRIASES--VPEQQITAYLVKIQRGGFI 96
Query: 78 QPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD--ALTLGIDVRTLFTSSGA 135
QPFG MIAVDE +F +LGYS+NA +ML + P +VP+++ ++ A LG DVR LFT S A
Sbjct: 97 QPFGSMIAVDEPSFRILGYSDNARDMLGITPQSVPSLDDKNDAAFALGTDVRALFTHSSA 156
Query: 136 AALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGAL 195
L+KA + E++L+NPI IH +TSGKPFY ILHRIDVG+VIDLEP +D ++ AGA+
Sbjct: 157 LLLEKAFSAREISLMNPIWIHSRTSGKPFYGILHRIDVGIVIDLEPARTEDPALSIAGAV 216
Query: 196 KSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRR 255
+S KLA +AIS+LQSLP G++ LLCD +V V +LTGYDRVMVYKFHEDEHGEVV+E +R
Sbjct: 217 QSQKLAVRAISQLQSLPGGDVKLLCDTVVESVRELTGYDRVMVYKFHEDEHGEVVSESKR 276
Query: 256 PDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLR 315
PDLEPY+G HYPATDIPQASRFL +N+VRMI DC A V+V+QD+ L QPL L GSTLR
Sbjct: 277 PDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHASAVRVVQDEALVQPLCLVGSTLR 336
Query: 316 APHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPL 375
APHGCHA+YM NMGSIASLVM+V IN DE +LWGLVVCHHTS R +PFPL
Sbjct: 337 APHGCHAQYMANMGSIASLVMAVIIN-GNDEEGVGGRSSMRLWGLVVCHHTSARCIPFPL 395
Query: 376 RYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLV 435
RYACEFL+Q FG+Q+N E++L+AQ EK +LRTQT+LCDMLLRDSP GIVTQ+P++MDLV
Sbjct: 396 RYACEFLMQAFGLQLNMELQLAAQSLEKRVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLV 455
Query: 436 KCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGD 495
KCDGAALY++G + LGVTPTE QI+DI EWLL +H STGLSTDSL +AGYPGA +LGD
Sbjct: 456 KCDGAALYFQGNYYPLGVTPTEAQIRDIIEWLLAFHGDSTGLSTDSLGDAGYPGAASLGD 515
Query: 496 AVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQ 555
AVCG+A IT KDFLFWFRSHTAKEIKWGGAKH KD G++MHPRSSFKAFLEVVK
Sbjct: 516 AVCGMAVAYITEKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKS 575
Query: 556 RSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVR 615
RSLPWE+ EMDAIHSLQLILR S +D +SK +V+ + ++ +DEL + EMVR
Sbjct: 576 RSLPWENAEMDAIHSLQLILRDSFKDAEHRNSKAVVDPHVSEQELQGVDELSSVAREMVR 635
Query: 616 LIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSS 674
LIETA PI AVD G+VNGWN+K +ELTGL V++A+G +LV DLV +S + + +LS
Sbjct: 636 LIETATAPIFAVDVDGHVNGWNAKVSELTGLPVEEAMGKSLVHDLVFKESEETMNKLLSR 695
Query: 675 AF 676
A
Sbjct: 696 AL 697
>gi|363547546|gb|AEW26816.1| phytochrome P [Cycas fugax]
Length = 589
Score = 854 bits (2206), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/601 (68%), Positives = 489/601 (81%), Gaps = 16/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRAAPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V+IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVSIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G LWLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMLWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 F 676
Sbjct: 587 L 587
>gi|164598000|gb|ABY61307.1| phytochrome B [Arabidopsis thaliana]
gi|164598002|gb|ABY61308.1| phytochrome B [Arabidopsis thaliana]
gi|164598010|gb|ABY61312.1| phytochrome B [Arabidopsis thaliana]
Length = 1168
Score = 854 bits (2206), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/689 (60%), Positives = 515/689 (74%), Gaps = 16/689 (2%)
Query: 4 KSTNKTNYSRSSSARSKQN----ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISS 54
+ + S + S R + N ++ Q ++DA+L F++S FDYS S+ ++
Sbjct: 28 RGGEQAQSSGTKSLRPRSNTESMSKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLKTTT 87
Query: 55 STSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNI 114
S+VP ++AYL R+QRG IQPFGCMIAVDE +F ++GYSENA EML L P +VP +
Sbjct: 88 YGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGLMPQSVPTL 147
Query: 115 EQQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
E+ + L +G DVR+LFTSS + L++A E+ LLNP+ IH K +GKPFYAILHRIDVG
Sbjct: 148 EKPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGKPFYAILHRIDVG 207
Query: 175 LVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYD 234
+VIDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V V DLTGYD
Sbjct: 208 VVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRDLTGYD 267
Query: 235 RVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPP 294
RVMVYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A P
Sbjct: 268 RVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNATP 327
Query: 295 VKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN--DQE 352
V V+QD +L Q + L GSTLRAPHGCH++YM NMGSIASL M+V IN ED+ N
Sbjct: 328 VLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEDDGSNVASGR 387
Query: 353 QGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
+LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK +LRTQT+L
Sbjct: 388 SSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLL 447
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDMLLRDSP GIVTQ+P++MDLVKCDGAA Y GK + LGV P+E QIKD+ EWLL H
Sbjct: 448 CDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVVEWLLANHA 507
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AGYPGA ALGDAVCG+A IT +DFLFWFRSHTAKEIKWGGAKH
Sbjct: 508 DSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPE 567
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIV 591
KD G++MHPRSSF+AFLEVVK RS PWE EMDAIHSLQLILR S ++ E A +SK++
Sbjct: 568 DKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAAMNSKVVD 627
Query: 592 NV--PSVDDRIEK-IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTV 648
V P D E+ IDEL + EMVRLIETA VPI AVDA G +NGWN+K AELTGL+V
Sbjct: 628 GVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSV 687
Query: 649 DQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
++A+G +LV DL+ ++ V +LS A
Sbjct: 688 EEAMGKSLVSDLIYKENEATVNKLLSRAL 716
>gi|57791640|gb|AAW56588.1| phytochrome B [Arabidopsis thaliana]
Length = 1161
Score = 853 bits (2205), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/689 (60%), Positives = 515/689 (74%), Gaps = 16/689 (2%)
Query: 4 KSTNKTNYSRSSSARSKQN----ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISS 54
+ + S + S R + N ++ Q ++DA+L F++S FDYS S+ ++
Sbjct: 27 RGGEQAQSSGTKSLRPRSNTESMSKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLKTTT 86
Query: 55 STSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNI 114
S+VP ++AYL R+QRG IQPFGCMIAVDE +F ++GYSENA EML L P +VP +
Sbjct: 87 YGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGLMPQSVPTL 146
Query: 115 EQQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
E+ + L +G DVR+LFTSS + L++A E+ LLNP+ IH K +GKPFYAILHRIDVG
Sbjct: 147 EKPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGKPFYAILHRIDVG 206
Query: 175 LVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYD 234
+VIDLEP +D ++ AGA++S KLA +AIS+LQ+LP G+I LLCD +V V DLTGYD
Sbjct: 207 VVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVVESVRDLTGYD 266
Query: 235 RVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPP 294
RVMVYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A P
Sbjct: 267 RVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNATP 326
Query: 295 VKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN--DQE 352
V V+QD +L Q + L GSTLRAPHGCH++YM NMGSIASL M+V IN ED+ N
Sbjct: 327 VLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEDDGSNVASGR 386
Query: 353 QGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
+LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK +LRTQT+L
Sbjct: 387 SSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLL 446
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDMLLRDSP GIVTQ+P++MDLVKCDGAA Y GK + LGV P+E QIKD+ EWLL H
Sbjct: 447 CDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVVEWLLANHA 506
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AGYPGA ALGDAVCG+A IT +DFLFWFRSHTAKEIKWGGAKH
Sbjct: 507 DSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPE 566
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIV 591
KD G++MHPRSSF+AFLEVVK RS PWE EMDAIHSLQLILR S ++ E A +SK++
Sbjct: 567 DKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAAMNSKVVD 626
Query: 592 NV--PSVDDRIEK-IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTV 648
V P D E+ IDEL + EMVRLIETA VPI AVDA G +NGWN+K AELTGL+V
Sbjct: 627 GVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSV 686
Query: 649 DQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
++A+G +LV DL+ ++ V +LS A
Sbjct: 687 EEAMGKSLVSDLIYKENEATVNKLLSRAL 715
>gi|363547786|gb|AEW26934.1| phytochrome P [Macrozamia fraseri]
Length = 590
Score = 853 bits (2205), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/601 (68%), Positives = 489/601 (81%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ F ++ YSENA MLDLAP +VP +EQ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMEQV-FLTIGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H ++SGKPFYAI+HRIDVG+VID EPV D ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSRSSGKPFYAIVHRIDVGMVIDFEPVG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G+I LLCD +V +V +L+GYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELSGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVIN-----------GNMKLWGLVVCHHTSPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWVLGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D +++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLKVQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DL+ +S + V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESTETVERLLCHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|406685451|gb|AFS51166.1| phytochrome P, partial [Agathis silbae]
Length = 655
Score = 853 bits (2205), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/628 (66%), Positives = 494/628 (78%), Gaps = 19/628 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDAL----- 120
AYL R+QRG IQPFGCM+AV+E F ++ YSENA EMLDL P +VPN+++ +A+
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFRIIAYSENALEMLDLMPQSVPNMDRDEAMGSHGG 60
Query: 121 ----TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
T+G DVR LFT A AL+KAA E++L+NPI +H + + KPFYAI+HRIDVG+V
Sbjct: 61 RRVITIGTDVRALFTPESARALEKAAMAQEISLMNPIGVHSQKTNKPFYAIVHRIDVGMV 120
Query: 177 IDLEPVNPDDVPVTAAG-----ALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLT 231
IDLEPV G +++S KLA +AISRLQS +G+I +LCD +V +V +LT
Sbjct: 121 IDLEPVRTGSGGGGVGGLAAAGSVQSQKLAVRAISRLQS--AGDIGVLCDTVVEDVRELT 178
Query: 232 GYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCL 291
GYDRVMVYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC
Sbjct: 179 GYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCR 238
Query: 292 APPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ 351
A PVKVIQ ++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN EDE
Sbjct: 239 AAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEGGGSG 298
Query: 352 EQGR--KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQ 409
KLWGLVVCHHTSPR VPFPLRYACEFL+Q FG+Q+N E+ ++AQL EKHILRTQ
Sbjct: 299 SGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELRVAAQLTEKHILRTQ 358
Query: 410 TVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLE 469
T+LCDMLLRD+P+GIVT +P++MDLVKCDGAALYY G W+LGVTPTE QIKDIA+WLLE
Sbjct: 359 TLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLE 418
Query: 470 YHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKH 529
YH STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFW RSHTAKE+KWGGAKH
Sbjct: 419 YHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWLRSHTAKEMKWGGAKH 478
Query: 530 DSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKM 589
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD ++K
Sbjct: 479 HPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSNTKT 538
Query: 590 IVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVD 649
+V+ D +++ IDEL + +EMVRLIETA PILAVD++G +NGWN+K AELTGL V
Sbjct: 539 MVHGRLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAELTGLPVG 598
Query: 650 QAIGTALV-DLVAGDSVDVVKNMLSSAF 676
+A+G +LV DL+ +S D V ML A
Sbjct: 599 EAMGKSLVHDLIFHESADTVDKMLCHAL 626
>gi|363547778|gb|AEW26930.1| phytochrome P [Macrozamia douglasii]
gi|363547793|gb|AEW26937.1| phytochrome P [Macrozamia lucida]
gi|363547800|gb|AEW26940.1| phytochrome P [Macrozamia moorei]
Length = 590
Score = 853 bits (2205), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/601 (68%), Positives = 489/601 (81%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ F ++ YSENA MLDLAP +VP +EQ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMEQV-FLTIGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H ++SGKPFYAI+HRIDVG+VID EPV D ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSRSSGKPFYAIVHRIDVGMVIDFEPVG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVIN-----------GNMKLWGLVVCHHTSPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWVLGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D +++ +DEL + +EM RL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLKVQSMDELSSVASEMARL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLCHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|57791642|gb|AAW56589.1| phytochrome B [Arabidopsis thaliana]
Length = 1158
Score = 853 bits (2204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/689 (60%), Positives = 515/689 (74%), Gaps = 16/689 (2%)
Query: 4 KSTNKTNYSRSSSARSKQN----ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISS 54
+ + S + S R + N ++ Q ++DA+L F++S FDYS S+ ++
Sbjct: 25 RGGEQAQSSGTKSLRPRSNTESMSKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLKTTT 84
Query: 55 STSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNI 114
S+VP ++AYL R+QRG IQPFGCMIAVDE +F ++GYSENA EML L P +VP +
Sbjct: 85 YGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGLMPQSVPTL 144
Query: 115 EQQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
E+ + L +G DVR+LFTSS + L++A E+ LLNP+ IH K +GKPFYAILHRIDVG
Sbjct: 145 EKPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGKPFYAILHRIDVG 204
Query: 175 LVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYD 234
+VIDLEP +D ++ AGA++S KLA +AIS+LQ+LP G+I LLCD +V V DLTGYD
Sbjct: 205 VVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVVESVRDLTGYD 264
Query: 235 RVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPP 294
RVMVYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A P
Sbjct: 265 RVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNATP 324
Query: 295 VKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN--DQE 352
V V+QD +L Q + L GSTLRAPHGCH++YM NMGSIASL M+V IN ED+ N
Sbjct: 325 VLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEDDGSNVASGR 384
Query: 353 QGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
+LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK +LRTQT+L
Sbjct: 385 SSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLL 444
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDMLLRDSP GIVTQ+P++MDLVKCDGAA Y GK + LGV P+E QIKD+ EWLL H
Sbjct: 445 CDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVVEWLLANHA 504
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AGYPGA ALGDAVCG+A IT +DFLFWFRSHTAKEIKWGGAKH
Sbjct: 505 DSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPE 564
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIV 591
KD G++MHPRSSF+AFLEVVK RS PWE EMDAIHSLQLILR S ++ E A +SK++
Sbjct: 565 DKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAAMNSKVVD 624
Query: 592 NV--PSVDDRIEK-IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTV 648
V P D E+ IDEL + EMVRLIETA VPI AVDA G +NGWN+K AELTGL+V
Sbjct: 625 GVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSV 684
Query: 649 DQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
++A+G +LV DL+ ++ V +LS A
Sbjct: 685 EEAMGKSLVSDLIYKENEATVNKLLSRAL 713
>gi|363547519|gb|AEW26803.1| phytochrome P [Cycas chamaoensis]
Length = 589
Score = 853 bits (2204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/601 (68%), Positives = 488/601 (81%), Gaps = 16/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 PHGCHSQYMANMGSIASLVLAVIIN-----------GNVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 F 676
Sbjct: 587 L 587
>gi|363547581|gb|AEW26833.1| phytochrome P [Cycas pectinata]
Length = 589
Score = 853 bits (2204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/601 (68%), Positives = 487/601 (81%), Gaps = 16/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E+ L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEIGLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 PHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 F 676
Sbjct: 587 L 587
>gi|312282447|dbj|BAJ34089.1| unnamed protein product [Thellungiella halophila]
Length = 1172
Score = 853 bits (2204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/663 (62%), Positives = 501/663 (75%), Gaps = 9/663 (1%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ Q ++DA+L F++S FDYS S+ ++ S+VP ++AYL R+QRG I
Sbjct: 59 SKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLKTTTYGSSVPEQQITAYLSRIQRGGYI 118
Query: 78 QPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAA 137
QPFGCMIAVDE F ++GYSENA EML L P +VP++E+ + L +G DVR+LFT+S +
Sbjct: 119 QPFGCMIAVDESTFRIIGYSENAREMLGLTPQSVPSLEKPEILAMGTDVRSLFTASSSIL 178
Query: 138 LQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKS 197
L++A E+ LLNP+ IH K +GKPFYAILHRIDVG+VIDLEP +D ++ AGA++S
Sbjct: 179 LERAFVAREITLLNPVWIHSKNTGKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQS 238
Query: 198 YKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPD 257
KLA +AIS+LQSLP G+I LLCD +V V DLTGYDRVMVYKFHEDEHGEVVAE RR D
Sbjct: 239 QKLAVRAISQLQSLPGGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGEVVAESRRDD 298
Query: 258 LEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAP 317
LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV V+QD +L Q + L GSTLRAP
Sbjct: 299 LEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVLVVQDDRLTQSMCLVGSTLRAP 358
Query: 318 HGCHARYMENMGSIASLVMSVTINEAEDELDN--DQEQGRKLWGLVVCHHTSPRFVPFPL 375
HGCH++YM NMGSIASL M+V IN ED+ N +LWGLVVCHHTS R +PFPL
Sbjct: 359 HGCHSQYMANMGSIASLAMAVIINGNEDDGSNVAGGRNSMRLWGLVVCHHTSSRCIPFPL 418
Query: 376 RYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLV 435
RYACEFL+Q FG+Q+N E++L+ Q+ EK +LRTQT+LCDMLLRDSP GIVTQ+P++MDLV
Sbjct: 419 RYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLV 478
Query: 436 KCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGD 495
KCDGAA Y GK + LGV PTE QIKD+ EWLL H STGLSTDSL +AGYPGA ALGD
Sbjct: 479 KCDGAAFLYHGKYYPLGVAPTEAQIKDVVEWLLANHADSTGLSTDSLGDAGYPGAAALGD 538
Query: 496 AVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQ 555
AVCG+A IT +DFLFWFRSHTAKEIKWGGAK KD G++MHPRSSFKAFLEVVK
Sbjct: 539 AVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKRHPEDKDDGQRMHPRSSFKAFLEVVKS 598
Query: 556 RSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVNVPSVDDRIEKIDELRIITNEMV 614
RS PWE EMDAIHSLQLILR S ++ E A +SK + IDEL + EMV
Sbjct: 599 RSQPWETAEMDAIHSLQLILRDSFKESEAALNSKTADGAVQCMAGEQGIDELGAVAREMV 658
Query: 615 RLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLS 673
RLIETA VPI AVDA G +NGWN+K AELTGL+V++A+G +LV DL+ ++ + V +LS
Sbjct: 659 RLIETATVPIFAVDAGGCINGWNAKIAELTGLSVEEAMGKSLVSDLIYKENEETVDKLLS 718
Query: 674 SAF 676
A
Sbjct: 719 RAL 721
>gi|57791636|gb|AAW56586.1| phytochrome B [Arabidopsis thaliana]
Length = 1168
Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/689 (60%), Positives = 515/689 (74%), Gaps = 16/689 (2%)
Query: 4 KSTNKTNYSRSSSARSKQN----ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISS 54
+ + S + S R + N ++ Q ++DA+L F++S FDYS S+ ++
Sbjct: 28 RGGEQAQSSGTKSLRPRSNTESMSKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLKTTT 87
Query: 55 STSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNI 114
S+VP ++AYL R+QRG IQPFGCMIAVDE +F ++GYSENA EML L P +VP +
Sbjct: 88 YGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGLMPQSVPTL 147
Query: 115 EQQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
E+ + L +G DVR+LFTSS + L++A E+ LLNP+ IH K +GKPFYAILHRIDVG
Sbjct: 148 EKPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGKPFYAILHRIDVG 207
Query: 175 LVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYD 234
+VIDLEP +D ++ AGA++S KLA +AIS+LQ+LP G+I LLCD +V V DLTGYD
Sbjct: 208 VVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVVESVRDLTGYD 267
Query: 235 RVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPP 294
RVMVYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A P
Sbjct: 268 RVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNATP 327
Query: 295 VKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN--DQE 352
V V+QD +L Q + L GSTLRAPHGCH++YM NMGSIASL M+V IN ED+ N
Sbjct: 328 VLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEDDGSNVASGR 387
Query: 353 QGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
+LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK +LRTQT+L
Sbjct: 388 SSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLL 447
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDMLLRDSP GIVTQ+P++MDLVKCDGAA Y GK + LGV P+E QIKD+ EWLL H
Sbjct: 448 CDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVVEWLLANHA 507
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AGYPGA ALGDAVCG+A IT +DFLFWFRSHTAKEIKWGGAKH
Sbjct: 508 DSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPE 567
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIV 591
KD G++MHPRSSF+AFLEVVK RS PWE EMDAIHSLQLILR S ++ E A +SK++
Sbjct: 568 DKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAAMNSKVVD 627
Query: 592 NV--PSVDDRIEK-IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTV 648
V P D E+ IDEL + EMVRLIETA VPI AVDA G +NGWN+K AELTGL+V
Sbjct: 628 GVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSV 687
Query: 649 DQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
++A+G +LV DL+ ++ V +LS A
Sbjct: 688 EEAMGKSLVSDLIYKENEATVNKLLSRAL 716
>gi|406685443|gb|AFS51162.1| phytochrome P, partial [Agathis montana de Laub. 1969]
Length = 659
Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/632 (65%), Positives = 498/632 (78%), Gaps = 23/632 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDAL----- 120
AYL R+QRG IQPFGCM+AV+E F ++ YSENA EMLDL P +VPN+++ +A+
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFRIIAYSENALEMLDLMPQSVPNMDRDEAMGSHGG 60
Query: 121 ----TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
T+G+DVR LFT A AL+KAA E++L+NPI +H + + KPFYAI+HRIDVG+V
Sbjct: 61 RRVITIGMDVRALFTPESARALEKAAMAQEISLMNPIGVHSQNTNKPFYAIVHRIDVGMV 120
Query: 177 IDLEPVNPDDVPVTAAG-----ALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLT 231
IDLEPV AG +++S KLA +AISRLQS +G+I +LCD +V +V +LT
Sbjct: 121 IDLEPVRTGSGGGGVAGLAAAGSVQSQKLAVRAISRLQS--AGDIGVLCDTVVEDVRELT 178
Query: 232 GYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCL 291
GYDRVMVYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC
Sbjct: 179 GYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCR 238
Query: 292 APPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ 351
A PVKVIQ ++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ED+
Sbjct: 239 AAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDQGGGSG 298
Query: 352 EQGR------KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHI 405
+ KLWGLVVCHHTSPR VPFPLRYACEFL+Q FG+Q+N E++++AQL EKHI
Sbjct: 299 GRSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQVAAQLTEKHI 358
Query: 406 LRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAE 465
LRTQT+LCDMLLRD+P+GIVT +P++MDLVKCDGAALYY G W+LGVTPTE QIKDIA+
Sbjct: 359 LRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIAD 418
Query: 466 WLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWG 525
WLLEYH STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWG
Sbjct: 419 WLLEYHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWG 478
Query: 526 GAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAE 585
GAKH KD R+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD
Sbjct: 479 GAKHHPDDKDDARRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDS 538
Query: 586 DSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTG 645
++K +V+ D +++ IDEL + +EMVRLIETA PILAVD++G +NGWN+K AELTG
Sbjct: 539 NTKTMVHGRLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAELTG 598
Query: 646 LTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
L V +A+G +LV DL+ +S D V ML A
Sbjct: 599 LPVGEAMGKSLVHDLIFHESADTVDKMLCHAL 630
>gi|190586167|gb|ACE79200.1| phytochrome B-3 [Glycine max]
Length = 1100
Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/662 (62%), Positives = 509/662 (76%), Gaps = 11/662 (1%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ + DA+L F++S F+YS S+ I+S + VP ++AYL ++QRG I
Sbjct: 2 SKAIAQYTEDARLHAVFEQSGESGRSFNYSESIRIASES--VPEQQITAYLVKIQRGGFI 59
Query: 78 QPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD--ALTLGIDVRTLFTSSGA 135
QPFG MIAVDE +F +LGYS+NA +ML + P +VP+++ ++ A LG DVR LFT S A
Sbjct: 60 QPFGSMIAVDEPSFRILGYSDNARDMLGITPQSVPSLDDKNDAAFALGTDVRALFTHSSA 119
Query: 136 AALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGAL 195
L+KA + E++L+NPI IH +TSGKPFY ILHRIDVG+VIDLEP +D ++ AGA+
Sbjct: 120 LLLEKAFSAREISLMNPIWIHSRTSGKPFYGILHRIDVGIVIDLEPARTEDPALSIAGAV 179
Query: 196 KSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRR 255
+S KLA +AIS+LQSLP G++ LLCD +V V +LTGYDRVMVYKFHEDEHGEVV+E +R
Sbjct: 180 QSQKLAVRAISQLQSLPGGDVKLLCDTVVESVRELTGYDRVMVYKFHEDEHGEVVSESKR 239
Query: 256 PDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLR 315
PDLEPY+G HYPATDIPQASRFL +N+VRMI DC A V+V+QD+ L QPL L GSTLR
Sbjct: 240 PDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHASAVRVVQDEALVQPLCLVGSTLR 299
Query: 316 APHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPL 375
APHGCHA+YM NMGSIASLVM+V IN DE +LWGLVVCHHTS R +PFPL
Sbjct: 300 APHGCHAQYMANMGSIASLVMAVIIN-GNDEEGVGGRSSMRLWGLVVCHHTSARCIPFPL 358
Query: 376 RYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLV 435
RYACEFL+Q FG+Q+N E++L+AQ EK +LRTQT+LCDMLLRDSP GIVTQ+P++MDLV
Sbjct: 359 RYACEFLMQAFGLQLNMELQLAAQSLEKRVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLV 418
Query: 436 KCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGD 495
KCDGAALY++G + LGVTPTE QI+DI EWLL +H STGLSTDSL +AGYPGA +LGD
Sbjct: 419 KCDGAALYFQGNYYPLGVTPTEAQIRDIIEWLLAFHGDSTGLSTDSLGDAGYPGAASLGD 478
Query: 496 AVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQ 555
AVCG+A IT KDFLFWFRSHTAKEIKWGGAKH KD G++MHPRSSFKAFLEVVK
Sbjct: 479 AVCGMAVAYITEKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKS 538
Query: 556 RSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVR 615
RSLPWE+ EMDAIHSLQLILR S +D +SK + + + ++ +DEL + EMVR
Sbjct: 539 RSLPWENAEMDAIHSLQLILRDSFKDAEHRNSKAVADPRVSEQELQGVDELSSVAREMVR 598
Query: 616 LIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSS 674
LIETA PI AVD G+VNGWN+K +ELTGL V++A+G +LV DLV +S + + +LS
Sbjct: 599 LIETATAPIFAVDVDGHVNGWNAKVSELTGLPVEEAMGKSLVHDLVFKESEETMNKLLSR 658
Query: 675 AF 676
A
Sbjct: 659 AL 660
>gi|164598014|gb|ABY61314.1| phytochrome B [Arabidopsis thaliana]
Length = 1168
Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/689 (60%), Positives = 515/689 (74%), Gaps = 16/689 (2%)
Query: 4 KSTNKTNYSRSSSARSKQN----ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISS 54
+ + S + S R + N ++ Q ++DA+L F++S FDYS S+ ++
Sbjct: 28 RGGEQAQSSGTKSLRPRSNTESMSKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLKTTT 87
Query: 55 STSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNI 114
S+VP ++AYL R+QRG IQPFGCMIAVDE +F ++GYSENA EML L P +VP +
Sbjct: 88 YGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGLMPQSVPTL 147
Query: 115 EQQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
E+ + L +G DVR+LFTSS + L++A E+ LLNP+ IH K +GKPFYAILHRIDVG
Sbjct: 148 EKPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGKPFYAILHRIDVG 207
Query: 175 LVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYD 234
+VIDLEP +D ++ AGA++S KLA +AIS+LQ+LP G+I LLCD +V V DLTGYD
Sbjct: 208 VVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVVESVRDLTGYD 267
Query: 235 RVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPP 294
RVMVYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A P
Sbjct: 268 RVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNATP 327
Query: 295 VKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN--DQE 352
V V+QD +L Q + L GSTLRAPHGCH++YM NMGSIASL M+V IN ED+ N
Sbjct: 328 VLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEDDGSNVASGR 387
Query: 353 QGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
+LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK +LRTQT+L
Sbjct: 388 SSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLL 447
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDMLLRDSP GIVTQ+P++MDLVKCDGAA Y GK + LGV P+E QIKD+ EWLL H
Sbjct: 448 CDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVVEWLLANHA 507
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AGYPGA ALGDAVCG+A IT +DFLFWFRSHTAKEIKWGGAKH
Sbjct: 508 DSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPE 567
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIV 591
KD G++MHPRSSF+AFLEVVK RS PWE EMDAIHSLQLILR S ++ E A +SK++
Sbjct: 568 DKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAAMNSKVVD 627
Query: 592 NV--PSVDDRIEK-IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTV 648
V P D E+ IDEL + EMVRLIETA VPI AVDA G +NGWN+K AELTGL+V
Sbjct: 628 GVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSV 687
Query: 649 DQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
++A+G +LV DL+ ++ V +LS A
Sbjct: 688 EEAMGKSLVSDLIYKENEATVNKLLSRAL 716
>gi|78643950|emb|CAJ21338.1| phytochrome B2 [Populus tremula]
Length = 1144
Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/680 (61%), Positives = 511/680 (75%), Gaps = 13/680 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F + Y+ENA M L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRGIAYNENAKNMRGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+K E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGGDVRILFRPSSAVLLEKTFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHNQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVDGCINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSA 675
V DLV + ++V ++ A
Sbjct: 672 VHDLVYKEYEEIVDKLIHRA 691
>gi|449458123|ref|XP_004146797.1| PREDICTED: phytochrome A-like [Cucumis sativus]
gi|449527803|ref|XP_004170899.1| PREDICTED: phytochrome A-like [Cucumis sativus]
Length = 1148
Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/669 (62%), Positives = 514/669 (76%), Gaps = 17/669 (2%)
Query: 25 VAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSNVPSSTVSA-YLQRVQRGRLIQPFG 81
+ QTSIDAKL F++S FDYSTS++++++ + P +T + YLQ++Q LIQPFG
Sbjct: 30 ILTQTSIDAKLQSHFEQSGSSFDYSTSIHLTNNPTAAPPATTTTAYLQQIQISNLIQPFG 89
Query: 82 CMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKA 141
C++A+ ++ +S+NAPEML H VP+ + L +G D+R +FT+ A AL KA
Sbjct: 90 CLLALHPTTLKLIAFSQNAPEMLTTVAHTVPDGDNHPLLAIGTDLRGIFTAPTATALLKA 149
Query: 142 ANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLA 201
F +V LLNPIL+H K+SGKPFYAILHR+ L+ID EP+ PD VPVTAAGAL+SYKLA
Sbjct: 150 LAFPDVTLLNPILVHSKSSGKPFYAILHRVTGSLIIDFEPLKPDQVPVTAAGALQSYKLA 209
Query: 202 AKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPY 261
AKAI+RLQ+LPSG++ LCD +V EV +LTGYDRVM YKFH+D+HGEV +E +P LEPY
Sbjct: 210 AKAITRLQALPSGSLVRLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVFSEVTKPGLEPY 269
Query: 262 LGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCH 321
LG HYPATDIPQA+RFL MKNKVRMI DC A VKVIQD+ LD L+LCGSTLRAPH CH
Sbjct: 270 LGLHYPATDIPQAARFLFMKNKVRMIVDCRAKHVKVIQDQNLDFDLTLCGSTLRAPHCCH 329
Query: 322 ARYMENMGSIASLVMSVTINEAEDELDNDQEQG----------RKLWGLVVCHHTSPRFV 371
+YMENM SIASLVM++ +NE E+E + DQ ++LWGLVVCH+T+PRFV
Sbjct: 330 LQYMENMDSIASLVMAIVVNEEEEEENFDQSNNNDASLQKHKRKRLWGLVVCHNTTPRFV 389
Query: 372 PFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNV 431
PFPLRYACEFL QVF + VNKE+EL Q+ EK+ILRTQT+LCDML+RD+P+GIV++TPN+
Sbjct: 390 PFPLRYACEFLAQVFAIHVNKELELENQILEKNILRTQTLLCDMLMRDAPLGIVSRTPNI 449
Query: 432 MDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGAL 491
MDLVK DGAAL Y K+W LG+TPT+ ++DIA W+LEYH STGLSTDSL +AGYPGAL
Sbjct: 450 MDLVKSDGAALLYNNKVWRLGITPTDFHLQDIASWILEYHMDSTGLSTDSLYDAGYPGAL 509
Query: 492 ALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLE 551
ALGD VCG+AAV+I+S D +FWFRSHTA EI+WGGAKH+ G KD GRKMHPRSSFKAFLE
Sbjct: 510 ALGDVVCGMAAVRISSNDMIFWFRSHTASEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLE 569
Query: 552 VVKQRSLPWEDVEMDAIHSLQLILRGSLQ---DEVAEDSKMIVNVPSVDDRI-EKIDELR 607
VVK RSLPW+D EMDAIHSLQLILR + + D ++E + + D +I + EL
Sbjct: 570 VVKTRSLPWKDFEMDAIHSLQLILRNTFKDRDDHMSEIHRKSIQTTLSDLKILDGRQELE 629
Query: 608 IITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDV 667
+T+EMVRLIETA VPILAVD G VNGWNSK AELTGL+VD+AIG L+ LV SV++
Sbjct: 630 SVTSEMVRLIETATVPILAVDVDGLVNGWNSKIAELTGLSVDKAIGKNLLTLVKDSSVEI 689
Query: 668 VKNMLSSAF 676
VK ML A
Sbjct: 690 VKKMLVLAL 698
>gi|57791624|gb|AAW56580.1| phytochrome B [Arabidopsis thaliana]
gi|57791626|gb|AAW56581.1| phytochrome B [Arabidopsis thaliana]
gi|57791628|gb|AAW56582.1| phytochrome B [Arabidopsis thaliana]
gi|57791630|gb|AAW56583.1| phytochrome B [Arabidopsis thaliana]
gi|57791632|gb|AAW56584.1| phytochrome B [Arabidopsis thaliana]
gi|57791634|gb|AAW56585.1| phytochrome B [Arabidopsis thaliana]
gi|164597990|gb|ABY61302.1| phytochrome B [Arabidopsis thaliana]
gi|164597992|gb|ABY61303.1| phytochrome B [Arabidopsis thaliana]
gi|164597994|gb|ABY61304.1| phytochrome B [Arabidopsis thaliana]
gi|164598008|gb|ABY61311.1| phytochrome B [Arabidopsis thaliana]
gi|164598012|gb|ABY61313.1| phytochrome B [Arabidopsis thaliana]
gi|164598018|gb|ABY61316.1| phytochrome B [Arabidopsis thaliana]
gi|164598020|gb|ABY61317.1| phytochrome B [Arabidopsis thaliana]
Length = 1168
Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/689 (60%), Positives = 515/689 (74%), Gaps = 16/689 (2%)
Query: 4 KSTNKTNYSRSSSARSKQN----ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISS 54
+ + S + S R + N ++ Q ++DA+L F++S FDYS S+ ++
Sbjct: 28 RGGEQAQSSGTKSLRPRSNTESMSKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLKTTT 87
Query: 55 STSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNI 114
S+VP ++AYL R+QRG IQPFGCMIAVDE +F ++GYSENA EML L P +VP +
Sbjct: 88 YGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGLMPQSVPTL 147
Query: 115 EQQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
E+ + L +G DVR+LFTSS + L++A E+ LLNP+ IH K +GKPFYAILHRIDVG
Sbjct: 148 EKPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGKPFYAILHRIDVG 207
Query: 175 LVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYD 234
+VIDLEP +D ++ AGA++S KLA +AIS+LQ+LP G+I LLCD +V V DLTGYD
Sbjct: 208 VVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVVESVRDLTGYD 267
Query: 235 RVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPP 294
RVMVYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A P
Sbjct: 268 RVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNATP 327
Query: 295 VKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN--DQE 352
V V+QD +L Q + L GSTLRAPHGCH++YM NMGSIASL M+V IN ED+ N
Sbjct: 328 VLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEDDGSNVASGR 387
Query: 353 QGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
+LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK +LRTQT+L
Sbjct: 388 SSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLL 447
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDMLLRDSP GIVTQ+P++MDLVKCDGAA Y GK + LGV P+E QIKD+ EWLL H
Sbjct: 448 CDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVVEWLLANHA 507
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AGYPGA ALGDAVCG+A IT +DFLFWFRSHTAKEIKWGGAKH
Sbjct: 508 DSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPE 567
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIV 591
KD G++MHPRSSF+AFLEVVK RS PWE EMDAIHSLQLILR S ++ E A +SK++
Sbjct: 568 DKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAAMNSKVVD 627
Query: 592 NV--PSVDDRIEK-IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTV 648
V P D E+ IDEL + EMVRLIETA VPI AVDA G +NGWN+K AELTGL+V
Sbjct: 628 GVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSV 687
Query: 649 DQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
++A+G +LV DL+ ++ V +LS A
Sbjct: 688 EEAMGKSLVSDLIYKENEATVNKLLSRAL 716
>gi|39939388|gb|AAR32737.1| phytochrome B [Arabidopsis thaliana]
gi|164597996|gb|ABY61305.1| phytochrome B [Arabidopsis thaliana]
gi|164597998|gb|ABY61306.1| phytochrome B [Arabidopsis thaliana]
gi|164598004|gb|ABY61309.1| phytochrome B [Arabidopsis thaliana]
gi|164598006|gb|ABY61310.1| phytochrome B [Arabidopsis thaliana]
Length = 1168
Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/689 (60%), Positives = 515/689 (74%), Gaps = 16/689 (2%)
Query: 4 KSTNKTNYSRSSSARSKQN----ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISS 54
+ + S + S R + N ++ Q ++DA+L F++S FDYS S+ ++
Sbjct: 28 RGGEQAQSSGTKSLRPRSNTESMSKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLKTTT 87
Query: 55 STSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNI 114
S+VP ++AYL R+QRG IQPFGCMIAVDE +F ++GYSENA EML L P +VP +
Sbjct: 88 YGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGLMPQSVPTL 147
Query: 115 EQQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
E+ + L +G DVR+LFTSS + L++A E+ LLNP+ IH K +GKPFYAILHRIDVG
Sbjct: 148 EKPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGKPFYAILHRIDVG 207
Query: 175 LVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYD 234
+VIDLEP +D ++ AGA++S KLA +AIS+LQ+LP G+I LLCD +V V DLTGYD
Sbjct: 208 VVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVVESVRDLTGYD 267
Query: 235 RVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPP 294
RVMVYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A P
Sbjct: 268 RVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNATP 327
Query: 295 VKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN--DQE 352
V V+QD +L Q + L GSTLRAPHGCH++YM NMGSIASL M+V IN ED+ N
Sbjct: 328 VLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEDDGSNVASGR 387
Query: 353 QGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
+LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK +LRTQT+L
Sbjct: 388 SSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLL 447
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDMLLRDSP GIVTQ+P++MDLVKCDGAA Y GK + LGV P+E QIKD+ EWLL H
Sbjct: 448 CDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVVEWLLANHA 507
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AGYPGA ALGDAVCG+A IT +DFLFWFRSHTAKEIKWGGAKH
Sbjct: 508 DSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPE 567
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIV 591
KD G++MHPRSSF+AFLEVVK RS PWE EMDAIHSLQLILR S ++ E A +SK++
Sbjct: 568 DKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAAMNSKVVD 627
Query: 592 NV--PSVDDRIEK-IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTV 648
V P D E+ IDEL + EMVRLIETA VPI AVDA G +NGWN+K AELTGL+V
Sbjct: 628 GVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSV 687
Query: 649 DQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
++A+G +LV DL+ ++ V +LS A
Sbjct: 688 EEAMGKSLVSDLIYKENEATVNKLLSRAL 716
>gi|164597986|gb|ABY61300.1| phytochrome B [Arabidopsis thaliana]
Length = 1168
Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/689 (60%), Positives = 515/689 (74%), Gaps = 16/689 (2%)
Query: 4 KSTNKTNYSRSSSARSKQN----ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISS 54
+ + S + S R + N ++ Q ++DA+L F++S FDYS S+ ++
Sbjct: 28 RGGEQAQSSGTKSLRPRSNTESMSKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLKTTT 87
Query: 55 STSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNI 114
S+VP ++AYL R+QRG IQPFGCMIAVDE +F ++GYSENA EML L P +VP +
Sbjct: 88 YGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGLMPQSVPTL 147
Query: 115 EQQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
E+ + L +G DVR+LFTSS + L++A E+ LLNP+ IH K +GKPFYAILHRIDVG
Sbjct: 148 EKPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGKPFYAILHRIDVG 207
Query: 175 LVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYD 234
+VIDLEP +D ++ AGA++S KLA +AIS+LQ+LP G+I LLCD +V V DLTGYD
Sbjct: 208 VVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVVESVRDLTGYD 267
Query: 235 RVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPP 294
RVMVYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A P
Sbjct: 268 RVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNATP 327
Query: 295 VKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN--DQE 352
V V+QD +L Q + L GSTLRAPHGCH++YM NMGSIASL M+V IN ED+ N
Sbjct: 328 VLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEDDGSNVASGR 387
Query: 353 QGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
+LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK +LRTQT+L
Sbjct: 388 SSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLL 447
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDMLLRDSP GIVTQ+P++MDLVKCDGAA Y GK + LGV P+E QIKD+ EWLL H
Sbjct: 448 CDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVVEWLLANHA 507
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AGYPGA ALGDAVCG+A IT +DFLFWFRSHTAKEIKWGGAKH
Sbjct: 508 DSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPE 567
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIV 591
KD G++MHPRSSF+AFLEVVK RS PWE EMDAIHSLQLILR S ++ E A +SK++
Sbjct: 568 DKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAAMNSKVVD 627
Query: 592 NV--PSVDDRIEK-IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTV 648
V P D E+ IDEL + EMVRLIETA VPI AVDA G +NGWN+K AELTGL+V
Sbjct: 628 GVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSV 687
Query: 649 DQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
++A+G +LV DL+ ++ V +LS A
Sbjct: 688 EEAMGKSLVSDLIYKENKATVNKLLSRAL 716
>gi|363547798|gb|AEW26939.1| phytochrome P [Macrozamia montana]
Length = 590
Score = 852 bits (2202), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/601 (68%), Positives = 488/601 (81%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV E+ F ++ YSENA MLDLAP +VP +EQ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVGERTFRIIAYSENAVGMLDLAPQSVPTMEQV-FLTIGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H ++SGKPFYAI+HRIDVG+VID EPV D ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSRSSGKPFYAIVHRIDVGMVIDFEPVG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVIN-----------GNMKLWGLVVCHHTSPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWVLGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D +++ +DEL + +EM RL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLKVQSMDELSSVASEMARL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLCHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|57791618|gb|AAW56577.1| phytochrome B [Arabidopsis thaliana]
Length = 1162
Score = 852 bits (2202), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/689 (60%), Positives = 515/689 (74%), Gaps = 16/689 (2%)
Query: 4 KSTNKTNYSRSSSARSKQN----ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISS 54
+ + S + S R + N ++ Q ++DA+L F++S FDYS S+ ++
Sbjct: 29 RGGEQAQSSGTKSLRPRSNTESMSKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLKTTT 88
Query: 55 STSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNI 114
S+VP ++AYL R+QRG IQPFGCMIAVDE +F ++GYSENA EML + P +VP +
Sbjct: 89 YGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGIMPQSVPTL 148
Query: 115 EQQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
E+ + L +G DVR+LFTSS + L++A E+ LLNP+ IH K +GKPFYAILHRIDVG
Sbjct: 149 EKPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGKPFYAILHRIDVG 208
Query: 175 LVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYD 234
+VIDLEP +D ++ AGA++S KLA +AIS+LQ+LP G+I LLCD +V V DLTGYD
Sbjct: 209 VVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVVESVRDLTGYD 268
Query: 235 RVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPP 294
RVMVYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A P
Sbjct: 269 RVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNATP 328
Query: 295 VKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN--DQE 352
V V+QD +L Q + L GSTLRAPHGCH++YM NMGSIASL M+V IN ED+ N
Sbjct: 329 VLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEDDGSNVASGR 388
Query: 353 QGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
+LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK +LRTQT+L
Sbjct: 389 SSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLL 448
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDMLLRDSP GIVTQ+P++MDLVKCDGAA Y GK + LGV P+E QIKD+ EWLL H
Sbjct: 449 CDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVVEWLLANHA 508
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AGYPGA ALGDAVCG+A IT +DFLFWFRSHTAKEIKWGGAKH
Sbjct: 509 DSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPE 568
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIV 591
KD G++MHPRSSF+AFLEVVK RS PWE EMDAIHSLQLILR S ++ E A +SK++
Sbjct: 569 DKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAAMNSKVVD 628
Query: 592 NV--PSVDDRIEK-IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTV 648
V P D E+ IDEL + EMVRLIETA VPI AVDA G +NGWN+K AELTGL+V
Sbjct: 629 GVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSV 688
Query: 649 DQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
++A+G +LV DL+ ++ V +LS A
Sbjct: 689 EEAMGKSLVSDLIYKENEATVNKLLSRAL 717
>gi|57791644|gb|AAW56590.1| phytochrome B [Arabidopsis thaliana]
Length = 1168
Score = 852 bits (2202), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/689 (60%), Positives = 515/689 (74%), Gaps = 16/689 (2%)
Query: 4 KSTNKTNYSRSSSARSKQN----ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISS 54
+ + S + S R + N ++ Q ++DA+L F++S FDYS S+ ++
Sbjct: 28 RGGEQAQSSGTKSLRPRSNTESMSKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLKTTT 87
Query: 55 STSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNI 114
S+VP ++AYL R+QRG IQPFGCMIAVDE +F ++GYSENA EML L P +VP +
Sbjct: 88 YGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGLMPQSVPTL 147
Query: 115 EQQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
E+ + L +G DVR+LFTSS + L++A E+ LLNP+ IH K +GKPFYAILHRIDVG
Sbjct: 148 EKPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGKPFYAILHRIDVG 207
Query: 175 LVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYD 234
+VIDLEP +D ++ AGA++S KLA +AIS+LQ+LP G+I LLCD +V V DLTGYD
Sbjct: 208 VVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVVESVRDLTGYD 267
Query: 235 RVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPP 294
RVMVYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A P
Sbjct: 268 RVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNATP 327
Query: 295 VKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN--DQE 352
V V+QD +L Q + L GSTLRAPHGCH++YM NMGSIASL M+V IN ED+ N
Sbjct: 328 VLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEDDGSNVASGR 387
Query: 353 QGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
+LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK +LRTQT+L
Sbjct: 388 SSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLL 447
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDMLLRDSP GIVTQ+P++MDLVKCDGAA Y GK + LGV P+E QIKD+ EWLL H
Sbjct: 448 CDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVVEWLLANHA 507
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AGYPGA ALGDAVCG+A IT +DFLFWFRSHTAKEIKWGGAKH
Sbjct: 508 DSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPE 567
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIV 591
KD G++MHPRSSF+AFLEVVK RS PWE EMDAIHSLQLILR S ++ E A +SK++
Sbjct: 568 DKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAAMNSKVVD 627
Query: 592 NV--PSVDDRIEK-IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTV 648
V P D E+ IDEL + EMVRLIETA VPI AVDA G +NGWN+K AELTGL+V
Sbjct: 628 GVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSV 687
Query: 649 DQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
++A+G +LV DL+ ++ V +LS A
Sbjct: 688 EEAMGKSLVSDLIYKENEATVNKLLSRAL 716
>gi|363547776|gb|AEW26929.1| phytochrome P [Macrozamia diplomera]
gi|363547788|gb|AEW26935.1| phytochrome P [Macrozamia glaucophylla]
gi|363547804|gb|AEW26942.1| phytochrome P [Macrozamia pauli-guilielmi]
gi|363547806|gb|AEW26943.1| phytochrome P [Macrozamia platyrhachis]
Length = 590
Score = 852 bits (2202), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/601 (67%), Positives = 488/601 (81%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ F ++ YSENA MLDLAP +VP +EQ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMEQV-FLTIGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++ +NPI +H ++SGKPFYAI+HRIDVG+VID EPV D ++ AGA++
Sbjct: 61 SLEKAAAAQEISFMNPIWMHSRSSGKPFYAIVHRIDVGMVIDFEPVG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVIN-----------GNMKLWGLVVCHHTSPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWVLGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D +++ +DEL + +EM RL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLKVQSMDELSSVASEMARL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLCHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|164597988|gb|ABY61301.1| phytochrome B [Arabidopsis thaliana]
Length = 1168
Score = 852 bits (2202), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/689 (60%), Positives = 515/689 (74%), Gaps = 16/689 (2%)
Query: 4 KSTNKTNYSRSSSARSKQN----ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISS 54
+ + S + S R + N ++ Q ++DA+L F++S FDYS S+ ++
Sbjct: 28 RGGEQAQSSGTKSLRPRSNTESMSKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLKTTT 87
Query: 55 STSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNI 114
S+VP ++AYL R+QRG IQPFGCMIAVDE +F ++GYSENA EML L P +VP +
Sbjct: 88 YGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGLMPQSVPTL 147
Query: 115 EQQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
E+ + L +G DVR+LFTSS + L++A E+ LLNP+ IH K +GKPFYAILHRIDVG
Sbjct: 148 EKPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGKPFYAILHRIDVG 207
Query: 175 LVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYD 234
+VIDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V V DLTGYD
Sbjct: 208 VVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRDLTGYD 267
Query: 235 RVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPP 294
RVMVYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A P
Sbjct: 268 RVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNATP 327
Query: 295 VKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN--DQE 352
V V+QD +L Q + L GSTLRAPHGCH++YM NMGSIASL M+V IN ED+ N
Sbjct: 328 VLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEDDGSNVASGR 387
Query: 353 QGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
+LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK +LRTQT+L
Sbjct: 388 SSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLL 447
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDMLLRDSP GIVTQ+P++MDLVKCDGAA Y GK + LGV P+E QIKD+ EWLL H
Sbjct: 448 CDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVVEWLLANHA 507
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AGYPGA ALGDAVCG+A IT +DFLFWFRSHTAKEIKWGGAKH
Sbjct: 508 DSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPE 567
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAE-DSKMIV 591
KD G++MHPRSSF+AFLEVVK RS PWE EMDAIHSLQLILR S ++ A+ +SK++
Sbjct: 568 DKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEADMNSKVVD 627
Query: 592 NV--PSVDDRIEK-IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTV 648
V P D E+ IDEL + EMVRLIETA VPI AVDA G +NGWN+K AELTGL+V
Sbjct: 628 GVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSV 687
Query: 649 DQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
++A+G +LV DL+ ++ V +LS A
Sbjct: 688 EEAMGKSLVSDLIYKENEATVNKLLSRAL 716
>gi|57791638|gb|AAW56587.1| phytochrome B [Arabidopsis thaliana]
Length = 1158
Score = 852 bits (2202), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/689 (60%), Positives = 515/689 (74%), Gaps = 16/689 (2%)
Query: 4 KSTNKTNYSRSSSARSKQN----ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISS 54
+ + S + S R + N ++ Q ++DA+L F++S FDYS S+ ++
Sbjct: 25 RGGEQAQSSGTKSLRPRSNTESMSKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLKTTT 84
Query: 55 STSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNI 114
S+VP ++AYL R+QRG IQPFGCMIAVDE +F ++GYSENA EML L P +VP +
Sbjct: 85 YGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGLMPQSVPTL 144
Query: 115 EQQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
E+ + L +G DVR+LFTSS + L++A E+ LLNP+ IH K +GKPFYAILHRIDVG
Sbjct: 145 EKPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGKPFYAILHRIDVG 204
Query: 175 LVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYD 234
+VIDLEP +D ++ AGA++S KLA +AIS+LQ+LP G+I LLCD +V V DLTGYD
Sbjct: 205 VVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVVESVRDLTGYD 264
Query: 235 RVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPP 294
RVMVYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A P
Sbjct: 265 RVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNATP 324
Query: 295 VKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN--DQE 352
V V+QD +L Q + L GSTLRAPHGCH++YM NMGSIASL M+V IN ED+ N
Sbjct: 325 VLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEDDGSNVASGR 384
Query: 353 QGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
+LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK +LRTQT+L
Sbjct: 385 SSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLL 444
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDMLLRDSP GIVTQ+P++MDLVKCDGAA Y GK + LGV P+E QIKD+ EWLL H
Sbjct: 445 CDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVVEWLLANHA 504
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AGYPGA ALGDAVCG+A IT +DFLFWFRSHTAKEIKWGGAKH
Sbjct: 505 DSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPE 564
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIV 591
KD G++MHPRSSF+AFLEVVK RS PWE EMDAIHSLQLILR S ++ E A +SK++
Sbjct: 565 DKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAAMNSKVVD 624
Query: 592 NV--PSVDDRIEK-IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTV 648
V P D E+ IDEL + EMVRLIETA VPI AVDA G +NGWN+K AELTGL+V
Sbjct: 625 GVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSV 684
Query: 649 DQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
++A+G +LV DL+ ++ V +LS A
Sbjct: 685 EEAMGKSLVSDLIYKENEATVNKLLSRAL 713
>gi|363547784|gb|AEW26933.1| phytochrome P [Macrozamia flexuosa]
Length = 590
Score = 852 bits (2202), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/601 (67%), Positives = 490/601 (81%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ F ++ YSENA MLDLAP +VP +EQ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMEQV-FLTIGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H ++SGKPFYAI+HRIDVG+VID EPV D ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSRSSGKPFYAIVHRIDVGMVIDFEPVG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVKDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L +PL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRRPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVIN-----------GNMKLWGLVVCHHTSPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWVLGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQL+LRGS QD ++K +++ D +++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLVLRGSFQDIDDSETKTMIHSRLNDLKVQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLCHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|78643948|emb|CAJ21337.1| phytochrome B2 [Populus tremula]
Length = 1144
Score = 852 bits (2202), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/680 (61%), Positives = 511/680 (75%), Gaps = 13/680 (1%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
SS ++N + + + SK AQ ++DA+L F++S FDYS SV +
Sbjct: 19 SSGTSNMRQHHHPTESVSK----AIAQYTVDAQLHAVFEQSGGTGKSFDYSKSVR--TPN 72
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQ 116
+VP ++AYL ++QRG IQPFGCMIA DEQ+F + Y+ENA M L P +VP++E+
Sbjct: 73 QSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRGIAYNENAKNMRGLTPQSVPSLEK 132
Query: 117 QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
Q+ L +G DVR LF S A L+K E+ LLNPI IH K SGKPFYAILHRIDVG+V
Sbjct: 133 QEILFVGGDVRILFRPSSAVLLEKTFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIV 192
Query: 177 IDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRV 236
IDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V+ V +LTGYDRV
Sbjct: 193 IDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRV 252
Query: 237 MVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
MVYKFHEDEHGEVVAE +R DLEPY+G HYP+TDIPQASRFL +N+VRMI DC A PV
Sbjct: 253 MVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVS 312
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
VIQD+ L QPL L GSTLRAPHGCHA+YMENMGSIASL M+V I ++E + R
Sbjct: 313 VIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMR- 371
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L++QL EKH+LRTQT+LCDML
Sbjct: 372 LWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDML 431
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRDSP GIVTQ+P++MDLVKCDGAALYY+G+ + LGVTPTE QIKDI EWLL H TG
Sbjct: 432 LRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLTLHGDPTG 491
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AGYPGA LGDAVCG+A I +DFLFWFRSHTAKE+KWGGAKH KD
Sbjct: 492 LSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDD 551
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK +V+
Sbjct: 552 GQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHNQLK 611
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D ++ +DEL + EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +L
Sbjct: 612 DMELQGMDELSSVAREMVRLIETATAPIFAVDVDGCINGWNAKVAELTGLSVEEAMGKSL 671
Query: 657 V-DLVAGDSVDVVKNMLSSA 675
V DLV + ++V ++ A
Sbjct: 672 VHDLVYKEYEEIVDKLIHRA 691
>gi|363547808|gb|AEW26944.1| phytochrome P [Macrozamia plurinervia]
Length = 590
Score = 852 bits (2202), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/601 (68%), Positives = 490/601 (81%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ F ++ YSENA MLDLAP +VP +EQ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMEQV-FLTIGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H ++SGKPFYAI+HRIDVG+VID EPV D ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSRSSGKPFYAIVHRIDVGMVIDFEPVG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L +PL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRRPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVIN-----------GNMKLWGLVVCHHTSPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWVLGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D +++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLKVQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLCHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|363547769|gb|AEW26926.1| phytochrome P [Encephalartos woodii]
Length = 590
Score = 852 bits (2202), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/601 (68%), Positives = 488/601 (81%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D + AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAATSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM +MGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMASMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIGDSETKTMIHSRLNDLRVQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|57791614|gb|AAW56575.1| phytochrome B [Arabidopsis thaliana]
Length = 1162
Score = 852 bits (2201), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/689 (60%), Positives = 515/689 (74%), Gaps = 16/689 (2%)
Query: 4 KSTNKTNYSRSSSARSKQN----ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISS 54
+ + S + S R + N ++ Q ++DA+L F++S FDYS S+ ++
Sbjct: 29 RGGEQAQSSGTKSLRPRSNTESMSKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLKTTT 88
Query: 55 STSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNI 114
S+VP ++AYL R+QRG IQPFGCMIAVDE +F ++GYSENA EML + P +VP +
Sbjct: 89 YGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGIMPQSVPTL 148
Query: 115 EQQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
E+ + L +G DVR+LFTSS + L++A E+ LLNP+ IH K +GKPFYAILHRIDVG
Sbjct: 149 EKPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGKPFYAILHRIDVG 208
Query: 175 LVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYD 234
+VIDLEP +D ++ AGA++S KLA +AIS+LQ+LP G+I LLCD +V V DLTGYD
Sbjct: 209 VVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVVESVRDLTGYD 268
Query: 235 RVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPP 294
RVMVYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A P
Sbjct: 269 RVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNATP 328
Query: 295 VKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN--DQE 352
V V+QD +L Q + L GSTLRAPHGCH++YM NMGSIASL M+V IN ED+ N
Sbjct: 329 VLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEDDGSNVASGR 388
Query: 353 QGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
+LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK +LRTQT+L
Sbjct: 389 SSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLL 448
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDMLLRDSP GIVTQ+P++MDLVKCDGAA Y GK + LGV P+E QIKD+ EWLL H
Sbjct: 449 CDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVVEWLLANHA 508
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AGYPGA ALGDAVCG+A IT +DFLFWFRSHTAKEIKWGGAKH
Sbjct: 509 DSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPE 568
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIV 591
KD G++MHPRSSF+AFLEVVK RS PWE EMDAIHSLQLILR S ++ E A +SK++
Sbjct: 569 DKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAAMNSKVVD 628
Query: 592 NV--PSVDDRIEK-IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTV 648
V P D E+ IDEL + EMVRLIETA VPI AVDA G +NGWN+K AELTGL+V
Sbjct: 629 GVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSV 688
Query: 649 DQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
++A+G +LV DL+ ++ V +LS A
Sbjct: 689 EEAMGKSLVSDLIYKENEATVNKLLSRAL 717
>gi|363547603|gb|AEW26844.1| phytochrome P [Cycas siamensis]
Length = 589
Score = 852 bits (2201), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/601 (68%), Positives = 487/601 (81%), Gaps = 16/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 PHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDG ALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGTALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 F 676
Sbjct: 587 L 587
>gi|363547587|gb|AEW26836.1| phytochrome P [Cycas revoluta]
Length = 589
Score = 852 bits (2201), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/601 (68%), Positives = 487/601 (81%), Gaps = 16/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+QVN E++L+AQ+ EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQVNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 F 676
Sbjct: 587 L 587
>gi|363547717|gb|AEW26901.1| phytochrome P [Encephalartos lanatus]
Length = 590
Score = 852 bits (2200), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/601 (68%), Positives = 489/601 (81%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G++ LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSLPGGDVGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM +MGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMASMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|57791620|gb|AAW56578.1| phytochrome B [Arabidopsis thaliana]
gi|57791622|gb|AAW56579.1| phytochrome B [Arabidopsis thaliana]
gi|164598016|gb|ABY61315.1| phytochrome B [Arabidopsis thaliana]
gi|164598022|gb|ABY61318.1| phytochrome B [Arabidopsis thaliana]
Length = 1168
Score = 852 bits (2200), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/689 (60%), Positives = 515/689 (74%), Gaps = 16/689 (2%)
Query: 4 KSTNKTNYSRSSSARSKQN----ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISS 54
+ + S + S R + N ++ Q ++DA+L F++S FDYS S+ ++
Sbjct: 28 RGGEQAQSSGTKSLRPRSNTESMSKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLKTTT 87
Query: 55 STSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNI 114
S+VP ++AYL R+QRG IQPFGCMIAVDE +F ++GYSENA EML + P +VP +
Sbjct: 88 YGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGIMPQSVPTL 147
Query: 115 EQQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
E+ + L +G DVR+LFTSS + L++A E+ LLNP+ IH K +GKPFYAILHRIDVG
Sbjct: 148 EKPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGKPFYAILHRIDVG 207
Query: 175 LVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYD 234
+VIDLEP +D ++ AGA++S KLA +AIS+LQ+LP G+I LLCD +V V DLTGYD
Sbjct: 208 VVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVVESVRDLTGYD 267
Query: 235 RVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPP 294
RVMVYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A P
Sbjct: 268 RVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNATP 327
Query: 295 VKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN--DQE 352
V V+QD +L Q + L GSTLRAPHGCH++YM NMGSIASL M+V IN ED+ N
Sbjct: 328 VLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEDDGSNVASGR 387
Query: 353 QGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
+LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK +LRTQT+L
Sbjct: 388 SSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLL 447
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDMLLRDSP GIVTQ+P++MDLVKCDGAA Y GK + LGV P+E QIKD+ EWLL H
Sbjct: 448 CDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVVEWLLANHA 507
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AGYPGA ALGDAVCG+A IT +DFLFWFRSHTAKEIKWGGAKH
Sbjct: 508 DSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPE 567
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIV 591
KD G++MHPRSSF+AFLEVVK RS PWE EMDAIHSLQLILR S ++ E A +SK++
Sbjct: 568 DKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAAMNSKVVD 627
Query: 592 NV--PSVDDRIEK-IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTV 648
V P D E+ IDEL + EMVRLIETA VPI AVDA G +NGWN+K AELTGL+V
Sbjct: 628 GVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSV 687
Query: 649 DQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
++A+G +LV DL+ ++ V +LS A
Sbjct: 688 EEAMGKSLVSDLIYKENEATVNKLLSRAL 716
>gi|15224231|ref|NP_179469.1| phytochrome B [Arabidopsis thaliana]
gi|130189|sp|P14713.1|PHYB_ARATH RecName: Full=Phytochrome B
gi|16423|emb|CAA35222.1| unnamed protein product [Arabidopsis thaliana]
gi|4185145|gb|AAD08948.1| phytochrome B [Arabidopsis thaliana]
gi|330251714|gb|AEC06808.1| phytochrome B [Arabidopsis thaliana]
Length = 1172
Score = 852 bits (2200), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/689 (60%), Positives = 515/689 (74%), Gaps = 16/689 (2%)
Query: 4 KSTNKTNYSRSSSARSKQN----ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISS 54
+ + S + S R + N ++ Q ++DA+L F++S FDYS S+ ++
Sbjct: 32 RGGEQAQSSGTKSLRPRSNTESMSKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLKTTT 91
Query: 55 STSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNI 114
S+VP ++AYL R+QRG IQPFGCMIAVDE +F ++GYSENA EML + P +VP +
Sbjct: 92 YGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGIMPQSVPTL 151
Query: 115 EQQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
E+ + L +G DVR+LFTSS + L++A E+ LLNP+ IH K +GKPFYAILHRIDVG
Sbjct: 152 EKPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGKPFYAILHRIDVG 211
Query: 175 LVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYD 234
+VIDLEP +D ++ AGA++S KLA +AIS+LQ+LP G+I LLCD +V V DLTGYD
Sbjct: 212 VVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVVESVRDLTGYD 271
Query: 235 RVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPP 294
RVMVYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A P
Sbjct: 272 RVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNATP 331
Query: 295 VKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN--DQE 352
V V+QD +L Q + L GSTLRAPHGCH++YM NMGSIASL M+V IN ED+ N
Sbjct: 332 VLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEDDGSNVASGR 391
Query: 353 QGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
+LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK +LRTQT+L
Sbjct: 392 SSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLL 451
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDMLLRDSP GIVTQ+P++MDLVKCDGAA Y GK + LGV P+E QIKD+ EWLL H
Sbjct: 452 CDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVVEWLLANHA 511
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AGYPGA ALGDAVCG+A IT +DFLFWFRSHTAKEIKWGGAKH
Sbjct: 512 DSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPE 571
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIV 591
KD G++MHPRSSF+AFLEVVK RS PWE EMDAIHSLQLILR S ++ E A +SK++
Sbjct: 572 DKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAAMNSKVVD 631
Query: 592 NV--PSVDDRIEK-IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTV 648
V P D E+ IDEL + EMVRLIETA VPI AVDA G +NGWN+K AELTGL+V
Sbjct: 632 GVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSV 691
Query: 649 DQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
++A+G +LV DL+ ++ V +LS A
Sbjct: 692 EEAMGKSLVSDLIYKENEATVNKLLSRAL 720
>gi|363547615|gb|AEW26850.1| phytochrome P [Cycas tansachana]
Length = 589
Score = 852 bits (2200), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/601 (68%), Positives = 487/601 (81%), Gaps = 16/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 PHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV DL +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLAYEESVETVERLLYHA 586
Query: 676 F 676
Sbjct: 587 L 587
>gi|57791616|gb|AAW56576.1| phytochrome B [Arabidopsis thaliana]
Length = 1158
Score = 852 bits (2200), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/689 (60%), Positives = 515/689 (74%), Gaps = 16/689 (2%)
Query: 4 KSTNKTNYSRSSSARSKQN----ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISS 54
+ + S + S R + N ++ Q ++DA+L F++S FDYS S+ ++
Sbjct: 25 RGGEQAQSSGTKSLRPRSNTESMSKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLKTTT 84
Query: 55 STSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNI 114
S+VP ++AYL R+QRG IQPFGCMIAVDE +F ++GYSENA EML + P +VP +
Sbjct: 85 YGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGIMPQSVPTL 144
Query: 115 EQQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
E+ + L +G DVR+LFTSS + L++A E+ LLNP+ IH K +GKPFYAILHRIDVG
Sbjct: 145 EKPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGKPFYAILHRIDVG 204
Query: 175 LVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYD 234
+VIDLEP +D ++ AGA++S KLA +AIS+LQ+LP G+I LLCD +V V DLTGYD
Sbjct: 205 VVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVVESVRDLTGYD 264
Query: 235 RVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPP 294
RVMVYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A P
Sbjct: 265 RVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNATP 324
Query: 295 VKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN--DQE 352
V V+QD +L Q + L GSTLRAPHGCH++YM NMGSIASL M+V IN ED+ N
Sbjct: 325 VLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEDDGSNVASGR 384
Query: 353 QGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
+LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK +LRTQT+L
Sbjct: 385 SSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLL 444
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDMLLRDSP GIVTQ+P++MDLVKCDGAA Y GK + LGV P+E QIKD+ EWLL H
Sbjct: 445 CDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVVEWLLANHA 504
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AGYPGA ALGDAVCG+A IT +DFLFWFRSHTAKEIKWGGAKH
Sbjct: 505 DSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPE 564
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIV 591
KD G++MHPRSSF+AFLEVVK RS PWE EMDAIHSLQLILR S ++ E A +SK++
Sbjct: 565 DKDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAAMNSKVVD 624
Query: 592 NV--PSVDDRIEK-IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTV 648
V P D E+ IDEL + EMVRLIETA VPI AVDA G +NGWN+K AELTGL+V
Sbjct: 625 GVVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSV 684
Query: 649 DQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
++A+G +LV DL+ ++ V +LS A
Sbjct: 685 EEAMGKSLVSDLIYKENEATVNKLLSRAL 713
>gi|406685437|gb|AFS51159.1| phytochrome P, partial [Agathis dammara]
Length = 655
Score = 852 bits (2200), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/628 (66%), Positives = 495/628 (78%), Gaps = 19/628 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDAL----- 120
AYL R+QRG IQPFGCM+AV+E F ++ YSENA EMLDL P +VPN+++ +A+
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFRIIAYSENALEMLDLMPQSVPNMDRDEAMGSHGG 60
Query: 121 ----TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
T+G DVR LFT A AL+KAA E++L+NPI +H + + KPFYAI+HRIDVG+V
Sbjct: 61 RRVITIGTDVRALFTPESARALEKAAMAQEISLMNPIGVHSQNTNKPFYAIVHRIDVGMV 120
Query: 177 IDLEPVNPDDVPVTAAG-----ALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLT 231
IDLEPV AG +++S KLA +AISRLQS +G+I +LCD +V +V +LT
Sbjct: 121 IDLEPVRTGSGGGGVAGLAAAGSVQSQKLAVRAISRLQS--AGDIGVLCDTVVEDVRELT 178
Query: 232 GYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCL 291
GYDRVMVYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC
Sbjct: 179 GYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCR 238
Query: 292 APPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ 351
A PVKVIQ ++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN EDE
Sbjct: 239 AAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEGGGSG 298
Query: 352 EQGR--KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQ 409
KLWGLVVCHHTSPR VPFPLRYACEFL+Q FG+Q+N E++++AQL EKHILRTQ
Sbjct: 299 SGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQVAAQLTEKHILRTQ 358
Query: 410 TVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLE 469
T+LCDMLLRD+P+GIVT +P++MDLVKCDGAALYY G W+LGVTPT QIKDIA+WLLE
Sbjct: 359 TLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTGAQIKDIADWLLE 418
Query: 470 YHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKH 529
YH STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 419 YHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKH 478
Query: 530 DSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKM 589
KD R+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD ++K
Sbjct: 479 HPDDKDDSRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSNTKT 538
Query: 590 IVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVD 649
+V+ D +++ IDEL + +EMVRLIETA PILAVD++G +NGWN+K AELTGL V
Sbjct: 539 MVHGRLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAELTGLPVG 598
Query: 650 QAIGTALV-DLVAGDSVDVVKNMLSSAF 676
+A+G +LV DL+ +S D V ML A
Sbjct: 599 EAMGKSLVHDLIFHESADTVDKMLCHAL 626
>gi|363547554|gb|AEW26820.1| phytochrome P [Cycas lindstromii]
Length = 589
Score = 851 bits (2199), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/601 (68%), Positives = 488/601 (81%), Gaps = 16/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGKDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIIHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 PHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 F 676
Sbjct: 587 L 587
>gi|363547852|gb|AEW26966.1| phytochrome P [Zamia kickxii]
Length = 590
Score = 851 bits (2199), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/601 (67%), Positives = 490/601 (81%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQP GCM+AV+E+ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT + A
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERE-LLTIGTDVRTLFTPASAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NP+ +H K+SGKPFYAILHRIDVG+VID EPV V ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPVWMHSKSSGKPFYAILHRIDVGMVIDFEPVG--GVAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELTQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGS+ASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMN-----------VNMKLWGLVVCHHTSPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLVAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTPTE QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDTETKTMIHSRLTDLRLQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|240119405|dbj|BAH79251.1| phytochrome B [Cardamine resedifolia]
Length = 1184
Score = 851 bits (2199), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/686 (61%), Positives = 510/686 (74%), Gaps = 21/686 (3%)
Query: 12 SRSSSARSKQN---------ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTS 57
S + S R +QN ++ Q ++DA+L F++S FDYS S+ ++ S
Sbjct: 44 SGTKSLRPQQNQPQSHTVSMSKAIQQYTVDARLHAVFEQSGGSGKSFDYSQSLKTTTYGS 103
Query: 58 NVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQ 117
+VP ++AYL R+QRG IQPFGCMIAVDE F ++GYSENA EML L P +VP++E+
Sbjct: 104 SVPEQQITAYLSRIQRGGFIQPFGCMIAVDESTFRIIGYSENAREMLGLMPQSVPSLEKP 163
Query: 118 DALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVI 177
+ L +G DVR+LF S + L++A E+ LLNP+ IH K +GKPFYAILHRIDVG+VI
Sbjct: 164 EILAMGTDVRSLFAPSSSILLERAFVAREITLLNPVWIHSKNTGKPFYAILHRIDVGVVI 223
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEP +D ++ AGA++S KLA +AISRLQSLP G+I LLCD +V V DLTGYDRVM
Sbjct: 224 DLEPARTEDPALSIAGAVQSQKLAVRAISRLQSLPGGDIKLLCDTVVESVRDLTGYDRVM 283
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A PV +
Sbjct: 284 VYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVLL 343
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN--DQEQGR 355
+QD +L Q + L GSTLRAPHGCH++YM NMGSIASL M+V IN E++ N
Sbjct: 344 VQDDRLSQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEEDGRNAGGGRNSM 403
Query: 356 KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDM 415
KLWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK +LR QT+LCDM
Sbjct: 404 KLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRMQTLLCDM 463
Query: 416 LLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGST 475
LLRDSP GIVTQ+P++MDLVKCDGAA Y GK + LGV PTE QIKDI +WLL H ST
Sbjct: 464 LLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPTEAQIKDIVDWLLANHADST 523
Query: 476 GLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKD 535
GLSTDSL +AGYPGA ALGDAVCG+A IT +DFLFWFRSHTAKEIKWGGAKH KD
Sbjct: 524 GLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKD 583
Query: 536 GGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVNV- 593
G++MHPRSSFKAFLEVVK RS PWE EMDAIHSLQLILR S ++ E A +SK +
Sbjct: 584 DGQRMHPRSSFKAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAAMNSKAVDGAV 643
Query: 594 -PSVDDRIEK-IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
P D E+ IDEL + EMVRLIETA VPI AVDA G +NGWN+K AELTGL+V++A
Sbjct: 644 QPCRDMSGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSVEEA 703
Query: 652 IGTALV-DLVAGDSVDVVKNMLSSAF 676
+G +LV DL+ ++ + V +LS A
Sbjct: 704 MGKSLVSDLIYKENEETVNKLLSRAL 729
>gi|363547880|gb|AEW26980.1| phytochrome P [Zamia pumila]
Length = 590
Score = 851 bits (2199), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/601 (67%), Positives = 490/601 (81%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQP GCM+AV+E+ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT + A
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERE-LLTIGTDVRTLFTPANAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NP+ +H K+SGKPFYAILHRIDVG+VID EPV V ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPVWMHSKSSGKPFYAILHRIDVGMVIDFEPVG--GVAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELTQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGS+ASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMN-----------VNMKLWGLVVCHHTSPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLVAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTPTE QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDTETKTMIHSRLTDLRLQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|363547836|gb|AEW26958.1| phytochrome P [Zamia elegantissima]
Length = 590
Score = 851 bits (2198), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/601 (67%), Positives = 489/601 (81%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQP GCM+AV+E+ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT + A
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERE-LLTIGTDVRTLFTPASAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NP+ +H K+SGKPFYAILHRIDVG+VID EPV ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPVWMHSKSSGKPFYAILHRIDVGMVIDFEPVG--GAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGS+ASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMN-----------VNMKLWGLVVCHHTSPRAVPFPIR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTPTE QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWMLGVTPTEAQIKDIADWLLECHSDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD RKMHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDESRKMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLTDLRLQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGRSLVCDLIYEESMETVERLLHHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|363547738|gb|AEW26911.1| phytochrome P [Encephalartos ngoyanus]
Length = 590
Score = 851 bits (2198), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/601 (68%), Positives = 487/601 (81%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D + AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAATSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM +MGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMASMGSIASLVMAVVIN-----------VNPKLWGLVVCHHTSPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVAGEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|406685439|gb|AFS51160.1| phytochrome P, partial [Agathis lanceolata]
Length = 659
Score = 851 bits (2198), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/632 (65%), Positives = 497/632 (78%), Gaps = 23/632 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDAL----- 120
AYL R+QRG IQPFGCM+AV+E F ++ YSENA EMLDL P +VPN+++ +A+
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFRIIAYSENALEMLDLMPQSVPNMDRDEAMGSHGR 60
Query: 121 ----TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
T+G+DVR LFT A AL+KAA E++L+NPI +H + + KPFYAI+HRIDVG+V
Sbjct: 61 RRVITIGMDVRALFTPESARALEKAAMAQEISLMNPIGVHSQNTNKPFYAIVHRIDVGMV 120
Query: 177 IDLEPVNPDDVPVTAAG-----ALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLT 231
IDLEPV AG +++S KLA +AISRLQS +G+I +LCD +V +V +LT
Sbjct: 121 IDLEPVRTGSGGGGVAGLAAAGSVQSQKLAVRAISRLQS--AGDIGVLCDTVVEDVRELT 178
Query: 232 GYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCL 291
GYDRVMVYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC
Sbjct: 179 GYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCR 238
Query: 292 APPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ 351
A PVKVIQ ++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN EDE
Sbjct: 239 AAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEGGGSG 298
Query: 352 EQGR------KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHI 405
+ KLWGLVVCHHTSPR VPFPLRYACEFL+Q FG+Q+N E++++AQL EKHI
Sbjct: 299 GRSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQVAAQLTEKHI 358
Query: 406 LRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAE 465
LRTQT+LCDMLLRD+P+GIVT +P++MDLVKCDGAALYY G W+LGVTPTE QIKDIA+
Sbjct: 359 LRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIAD 418
Query: 466 WLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWG 525
WLLEYH STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFL WFRSHTAKE+KWG
Sbjct: 419 WLLEYHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLSWFRSHTAKEMKWG 478
Query: 526 GAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAE 585
GAKH KD R+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD
Sbjct: 479 GAKHHPDDKDDARRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDS 538
Query: 586 DSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTG 645
++K +V+ D +++ IDEL + +EMVRLIETA PILAVD++G +NGWN+K AELTG
Sbjct: 539 NTKTMVHGRLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAELTG 598
Query: 646 LTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
L V +A+G +LV DL+ +S D V ML A
Sbjct: 599 LPVGEAMGKSLVHDLIFHESADTVDKMLCHAL 630
>gi|363547552|gb|AEW26819.1| phytochrome P [Cycas hongheensis]
gi|363547611|gb|AEW26848.1| phytochrome P [Cycas taitungensis]
Length = 589
Score = 851 bits (2198), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/601 (68%), Positives = 487/601 (81%), Gaps = 16/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 F 676
Sbjct: 587 L 587
>gi|371941942|gb|ACE79196.2| phytochrome A-2 [Glycine max]
Length = 1130
Score = 850 bits (2197), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/671 (61%), Positives = 518/671 (77%), Gaps = 20/671 (2%)
Query: 27 AQTSIDAKLAEDFDESDFDYSTSVNISSSTS----NVPSS--TVSAYLQRVQRGRLIQPF 80
AQ ++DAK+ F+ES + S ++ S + N P S +AYL R+QRG++IQPF
Sbjct: 23 AQATVDAKIHATFEESGSSFDYSSSVRVSGTADGVNQPRSDKVTTAYLNRMQRGKMIQPF 82
Query: 81 GCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQK 140
GC++A+DE+ V+ YSENAPEML + HAVP++ AL +G D++TLFT+ + LQK
Sbjct: 83 GCLLAIDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHPALGIGTDIKTLFTAPSVSGLQK 142
Query: 141 AANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKL 200
A +V+LLNPIL+HCKTSGKPFYAI+HR+ L++D EPV P +VP+TAAGAL+SYKL
Sbjct: 143 ALGCADVSLLNPILVHCKTSGKPFYAIVHRVTGSLIVDFEPVKPYEVPMTAAGALQSYKL 202
Query: 201 AAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEP 260
AAKAI+RLQSLPSGN+ LCD +V EV +LTGYDRVM YKFHED+HGEV+AE +P LEP
Sbjct: 203 AAKAITRLQSLPSGNMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVIAEITKPGLEP 262
Query: 261 YLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGC 320
YLG HYPATDIPQASRFL KNKVRMI DC A V+V+QD+KL L LCGSTLRAPH C
Sbjct: 263 YLGLHYPATDIPQASRFLFRKNKVRMIVDCHAKHVRVLQDEKLQFDLILCGSTLRAPHSC 322
Query: 321 HARYMENMGSIASLVMSVTINEAEDELDND--QEQGR-KLWGLVVCHHTSPRFVPFPLRY 377
HA+YM NM SIASLV++V +N+ E++ D D Q Q R +LWGLVVCH+T+PRFVPFPLRY
Sbjct: 323 HAQYMANMDSIASLVLAVVVNDNEEDGDTDAVQPQKRERLWGLVVCHNTTPRFVPFPLRY 382
Query: 378 ACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKC 437
ACEFL QVF V V+KE+EL Q+ EK+ILRTQ +LC ML+RD+P+GIV+++PN+MDLVKC
Sbjct: 383 ACEFLAQVFAVHVHKEIELEYQIIEKNILRTQALLC-MLMRDAPLGIVSESPNIMDLVKC 441
Query: 438 DGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAV 497
DGAAL YR K+W LGVTP+E QI++IA WL EYH STG STDSL +AG+P AL+LGD V
Sbjct: 442 DGAALIYRNKVWRLGVTPSEPQIREIALWLSEYHMDSTGFSTDSLFDAGFPSALSLGDVV 501
Query: 498 CGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRS 557
CG+A+V++T+KD +FWFRSHTA EI+WGGAKH++G KD R+MHPRSSFKAFLEVVK RS
Sbjct: 502 CGMASVRVTAKDMVFWFRSHTAAEIRWGGAKHEAGEKDDSRRMHPRSSFKAFLEVVKARS 561
Query: 558 LPWEDVEMDAIHSLQLILRGSLQDEVAE---DSKMI------VNVPSVDD-RIEKIDELR 607
LPW++ EMDAIHSLQ+ILR + +++ ++K I + + ++D +IE++ EL
Sbjct: 562 LPWKEYEMDAIHSLQIILRNAFKEDTESLDLNAKAINTRLSDLKIEGINDLKIERMQELE 621
Query: 608 IITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDV 667
+T+E+VRLI+TA VPILAVD G VNGWN K AELTGL + +A G L+ LV S D
Sbjct: 622 AVTSEIVRLIDTATVPILAVDVDGLVNGWNIKIAELTGLPIGEATGKHLLTLVEDSSTDR 681
Query: 668 VKNMLSSAFLA 678
VK ML+ A L
Sbjct: 682 VKKMLNLALLG 692
>gi|363547903|gb|AEW26991.1| phytochrome P [Pseudotsuga menziesii]
Length = 590
Score = 850 bits (2197), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/601 (68%), Positives = 491/601 (81%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGC++AV+E F ++ YS NA EMLDLAP +VP++E + LT+G DVRTLFT++ A
Sbjct: 2 IQPFGCVLAVEETTFRIIAYSGNAVEMLDLAPQSVPSMEPE-VLTIGTDVRTLFTAASAN 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +HCK S KPFYA++HRIDVG+VID EP+ D ++AAGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWVHCKNSRKPFYAVVHRIDVGMVIDFEPLG--DAFMSAAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G+I LLCD +V V +LTGYDRVMVYKFHEDE GEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSLPCGDIGLLCDTVVENVRELTGYDRVMVYKFHEDERGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC+A PVK+IQ ++L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKLIQSEELMQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGS+ASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVIIN-----------GNMKLWGLVVCHHTSPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G W+LGVTPTE QIKDIA+WLLE+H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+A+ ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMASAIITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
S PW++VE+DAIHSLQLILRGS QD +K +V+ D R++ +DEL + +EMVRL
Sbjct: 468 SFPWDNVEIDAIHSLQLILRGSFQDIDDSGTKTMVHSRLNDLRLQGMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD++G VNGWN+K AELTGL V +A+ +LV DLV +SV V+ ML++A
Sbjct: 528 IETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMSMSLVQDLVFEESVQRVEKMLNNA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|363547655|gb|AEW26870.1| phytochrome P [Zamia restrepoi]
gi|363547862|gb|AEW26971.1| phytochrome P [Zamia manicata]
gi|363547864|gb|AEW26972.1| phytochrome P [Zamia muricata]
Length = 590
Score = 850 bits (2197), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/601 (67%), Positives = 489/601 (81%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQP GCM+AV+E+ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT + A
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERE-LLTIGTDVRTLFTPASAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NP+ +H K+SGKPFYAILHRIDVG+VID EPV ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPVWMHSKSSGKPFYAILHRIDVGMVIDFEPVG--GAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGS+ASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMN-----------VNMKLWGLVVCHHTSPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTPTE QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD +K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSKTKTMIHSRLTDLRLQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|363547868|gb|AEW26974.1| phytochrome P [Zamia obliqua]
Length = 590
Score = 850 bits (2197), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/601 (67%), Positives = 490/601 (81%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQP GCM+AV+E+ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT + A
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERE-LLTIGTDVRTLFTPASAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NP+ +H K+SGKPFYAILHRIDVG+VID EPV ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPVWMHSKSSGKPFYAILHRIDVGMVIDFEPVG--GAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGS++SLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSVSSLVMAVVMN-----------VNMKLWGLVVCHHTSPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTPTE QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLTDLRLQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|363547697|gb|AEW26891.1| phytochrome P [Encephalartos friderici-guilielmi]
Length = 589
Score = 850 bits (2197), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/601 (68%), Positives = 488/601 (81%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A
Sbjct: 1 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSAL 59
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D ++ AGA++
Sbjct: 60 SLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAAMSVAGAVQ 117
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 118 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 177
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 178 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 237
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM +MGSIASLVM+V IN KLWGLVVCHH SPR VPFPLR
Sbjct: 238 PHGCHAQYMASMGSIASLVMAVVIN-----------GNTKLWGLVVCHHASPRAVPFPLR 286
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 287 YACEFLMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 346
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 347 CDGAALYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 406
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 407 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 527 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHA 586
Query: 676 F 676
Sbjct: 587 L 587
>gi|363547730|gb|AEW26907.1| phytochrome P [Encephalartos middelburgensis]
Length = 590
Score = 850 bits (2196), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/601 (68%), Positives = 487/601 (81%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGC++AV+E+ + ++ YSENA MLDLAP +VP +EQ+ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCVLAVEERTYRIIAYSENAVGMLDLAPQSVPTMEQE-FLTIGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D + AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAATSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRAMPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYP A +LGDA
Sbjct: 348 CDGAALYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|363547816|gb|AEW26948.1| phytochrome P [Macrozamia serpentina]
Length = 590
Score = 850 bits (2196), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/601 (67%), Positives = 487/601 (81%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ F ++ YSENA MLDLAP +VP +EQ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMEQV-FLTIGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H ++SGKPFYAI+HRIDVG+VID EPV D ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSRSSGKPFYAIVHRIDVGMVIDFEPVG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+V IN KLWGLVVCHHT PR VPFPLR
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVIN-----------GNMKLWGLVVCHHTCPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTP E QIKDIA WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWVLGVTPAEAQIKDIAGWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D +++ +DEL + +EM RL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLKVQSMDELSSVASEMARL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLCHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|363547609|gb|AEW26847.1| phytochrome P [Cycas szechuanensis]
Length = 589
Score = 850 bits (2196), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/600 (68%), Positives = 487/600 (81%), Gaps = 16/600 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
>gi|37723871|gb|AAR02191.1| phytochrome A [Cyrtosia septentrionalis]
Length = 1118
Score = 850 bits (2196), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/664 (62%), Positives = 504/664 (75%), Gaps = 16/664 (2%)
Query: 25 VAAQTSIDAKLAEDFDE--SDFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLIQPFGC 82
+ AQT++DAKL +FD + FDYS S I + S V+AYLQ +QRG+LIQPFGC
Sbjct: 22 IIAQTTVDAKLDAEFDAMGTCFDYSQS--IRAPPDEQRSEKVTAYLQHIQRGKLIQPFGC 79
Query: 83 MIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAA 142
++A+DE+ F VL +SENAPEML + VP++ + +G DVR LFTS AALQKA
Sbjct: 80 LLALDEKTFKVLAFSENAPEMLTMVSFTVPSVGDHPTIVIGTDVRNLFTSPSTAALQKAL 139
Query: 143 NFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAA 202
F EV+LLNPIL+HCK+SG+PFYAI+HR+ L++D EPV P+DVP+TAAGAL+SYKLAA
Sbjct: 140 GFAEVSLLNPILVHCKSSGRPFYAIVHRVTGCLIVDFEPVKPNDVPMTAAGALQSYKLAA 199
Query: 203 KAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYL 262
KAIS+LQSLPSG++ LC+ ++ EV +LTGYDRVMVYKFHED+HGEV AE +P LE Y
Sbjct: 200 KAISKLQSLPSGSMEKLCNTVIEEVFELTGYDRVMVYKFHEDDHGEVFAEITKPGLESYF 259
Query: 263 GFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHA 322
G HYPATDIPQA+RFL MKNKVRMICDC A VKV QDKKL +S CGSTLRAPH CH
Sbjct: 260 GLHYPATDIPQAARFLFMKNKVRMICDCHAKHVKVYQDKKLPFDISFCGSTLRAPHSCHL 319
Query: 323 RYMENMGSIASLVMSVTINEAEDELDNDQEQG------RKLWGLVVCHHTSPRFVPFPLR 376
+YMENM SIASLVM+V +NE E++ N+ E+ ++LWGLVVCH+ SPRFVPFPLR
Sbjct: 320 QYMENMNSIASLVMAVVVNEGEEDGGNEAEENSPPHRRKRLWGLVVCHNESPRFVPFPLR 379
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD-SPVGIVTQTPNVMDLV 435
YACEFL+QVF + VNKE EL ++EK I+RTQT+LCDMLLR+ P+GI+TQTPN+MDLV
Sbjct: 380 YACEFLMQVFAIHVNKEFELENLVKEKKIMRTQTMLCDMLLREFVPLGIITQTPNIMDLV 439
Query: 436 KCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGD 495
KCDGAA Y+ K+W LGVTP+E QI DI WL H STGLSTD+L EAGYPG +LGD
Sbjct: 440 KCDGAAFLYQDKIWRLGVTPSEPQIYDIVHWLSACHMDSTGLSTDNLHEAGYPGISSLGD 499
Query: 496 AVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQ 555
VCG+A +ITSKD LFWFRS A I+WGGAKHD+ KD GR+MHPRSSFKAFLEV K
Sbjct: 500 VVCGMAVARITSKDMLFWFRSPAAASIRWGGAKHDAADKDDGRRMHPRSSFKAFLEVAKV 559
Query: 556 RSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVR 615
RSLPW D EM+AIHSLQLILR +L ++K I++ + ++E + E ++TNEMVR
Sbjct: 560 RSLPWGDHEMNAIHSLQLILRDTLN---GIENKAIIDPQLNELKLEGMVE--VVTNEMVR 614
Query: 616 LIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSA 675
LIETA VPILAVDA G +NGWN K A+LTGL+ D+A G L+ +V S+DVVK ML A
Sbjct: 615 LIETATVPILAVDADGLINGWNMKIAQLTGLSDDEARGKHLLTIVEDSSIDVVKRMLLLA 674
Query: 676 FLAI 679
I
Sbjct: 675 LQGI 678
>gi|57791679|gb|AAW56607.1| phytochrome B [Cleome hassleriana]
Length = 1045
Score = 850 bits (2196), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/638 (63%), Positives = 490/638 (76%), Gaps = 5/638 (0%)
Query: 44 FDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEM 103
FDYS S+ ++ S+VP ++AYL ++QRG IQPFGCMIAVDE F ++ YSENA EM
Sbjct: 7 FDYSRSLKTTTYGSSVPEKQITAYLSKIQRGGYIQPFGCMIAVDESTFKIISYSENAREM 66
Query: 104 LDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKP 163
L L P +VP+IE+ + L +G DVR+LFT S L++A E+ LLNP+ IH K +GKP
Sbjct: 67 LGLMPQSVPSIEKPEILAIGTDVRSLFTPSSTVLLERAFVAREITLLNPVWIHSKNTGKP 126
Query: 164 FYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVL 223
FYAILHRIDVG+VIDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +
Sbjct: 127 FYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTV 186
Query: 224 VNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNK 283
V V DLTGYDRVMVYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+
Sbjct: 187 VESVRDLTGYDRVMVYKFHEDEHGEVVAESKRADLEPYIGLHYPATDIPQASRFLFKQNR 246
Query: 284 VRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEA 343
VRMI DC A PV VIQD++L QPL L GSTLRAPHGCHA+YM NMGS+ASL M+V IN
Sbjct: 247 VRMIVDCHATPVCVIQDERLTQPLCLVGSTLRAPHGCHAQYMANMGSLASLAMAVIINGN 306
Query: 344 EDELDN--DQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLR 401
E+E + +LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+
Sbjct: 307 EEEAGSVAGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLALQMS 366
Query: 402 EKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIK 461
EK +LRTQT+LCDMLLRDSP GIVTQ P++MDLVKCDGAA Y+G+ + LGV P+E QIK
Sbjct: 367 EKRVLRTQTLLCDMLLRDSPTGIVTQKPSIMDLVKCDGAAFLYQGRYYPLGVAPSEAQIK 426
Query: 462 DIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKE 521
DI EWLL H STGLSTDSL +AGYPGA LGDAVCG+A IT KDFLFWFRSHTAKE
Sbjct: 427 DIVEWLLANHGDSTGLSTDSLADAGYPGAATLGDAVCGMAVAYITRKDFLFWFRSHTAKE 486
Query: 522 IKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD 581
IKWGGAKH KD ++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S ++
Sbjct: 487 IKWGGAKHHPEDKDDSQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFKE 546
Query: 582 EVAEDSKMIVNV--PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSK 639
++++ V P D ++ +DEL + EMVRLIETA VPILAVD G +NGWN K
Sbjct: 547 SETVNTRVAVRADQPGGDMAVQGLDELSAVAREMVRLIETATVPILAVDVEGRINGWNGK 606
Query: 640 AAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
AELTGL+V++A+G +LV DL+ + + V+ +LS A
Sbjct: 607 IAELTGLSVEEAMGKSLVRDLIYKEYEETVEKLLSHAL 644
>gi|363547780|gb|AEW26931.1| phytochrome P [Macrozamia dyeri]
Length = 590
Score = 850 bits (2196), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/601 (67%), Positives = 486/601 (80%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ F ++ YSENA MLDLAP +VP +EQ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMEQV-FLTIGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++ +NPI +H ++SGKPFYAI+HRIDVG+VID EPV D ++ AGA++
Sbjct: 61 SLEKAAAAQEISFMNPIWMHSRSSGKPFYAIVHRIDVGMVIDFEPVG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA AISRLQSLP G+I LLCD V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVGAISRLQSLPGGDIGLLCDTAVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVIN-----------GNMKLWGLVVCHHTSPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWVLGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D +++ +DEL + +EM RL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLKVQSMDELSSVASEMARL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLCHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|363547740|gb|AEW26912.1| phytochrome P [Encephalartos nubimontanus]
Length = 590
Score = 850 bits (2196), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/601 (68%), Positives = 486/601 (80%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D + AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAATSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM +MGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMASMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W LGVTP E QIKDIAEWLLE H TGLSTDSL +AGYP A +LGDA
Sbjct: 348 CDGAALYYGGMVWALGVTPAEAQIKDIAEWLLECHGDWTGLSTDSLADAGYPAAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 528 IETATAPILAVDCGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|363547820|gb|AEW26950.1| phytochrome P [Macrozamia stenomera]
Length = 590
Score = 850 bits (2196), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/601 (67%), Positives = 489/601 (81%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ F ++ YSENA MLDLAP +VP +EQ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMEQV-FLTIGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H ++SGKPFYAI+HRIDVG+VID EPV D ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSRSSGKPFYAIVHRIDVGMVIDFEPVG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L +PL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRRPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVIN-----------GNMKLWGLVVCHHTSPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTP E QIKDIA+WLLE H TGLSTDSL +AGY GA +LGDA
Sbjct: 348 CDGAALYYGGMVWVLGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYSGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D +++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLKVQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMEAVERLLCHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|363547889|gb|AEW26984.1| phytochrome P [Zamia standleyi]
Length = 590
Score = 850 bits (2196), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/601 (67%), Positives = 489/601 (81%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQP GCM+AV+E+ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT + A
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERE-LLTIGTDVRTLFTPASAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NP+ +H K+SGKPFYAILHRIDVG+VID EPV ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPVWMHSKSSGKPFYAILHRIDVGMVIDFEPVG--GAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGS+ASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMN-----------VNMKLWGLVVCHHTSPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTPTE QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDKGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLTDLRLQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAV + G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVSSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|363547685|gb|AEW26885.1| phytochrome P [Encephalartos cupidus]
Length = 590
Score = 850 bits (2196), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/601 (68%), Positives = 487/601 (81%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D + AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAATSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYP A +LGDA
Sbjct: 348 CDGAALYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSF+AFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFEAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|363547844|gb|AEW26962.1| phytochrome P [Zamia hymenophyllidia]
Length = 590
Score = 850 bits (2196), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/601 (67%), Positives = 490/601 (81%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQP GCM+AV+E+ F ++ YSENA +LDLAP +VP +E++ LT+G DVRTLFT + A
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGILDLAPQSVPTMERE-LLTIGTDVRTLFTPASAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NP+ +H K+SGKPFYAILHRIDVG+VID EPV +PV AGA++
Sbjct: 61 SLEKAAAAQEISLMNPVWMHSKSSGKPFYAILHRIDVGMVIDFEPVGGAAMPV--AGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGS+ASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMN-----------VNMKLWGLVVCHHTSPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTPTE QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ + EL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLTDLRVQSMGELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|363547671|gb|AEW26878.1| phytochrome P [Encephalartos aplanatus]
Length = 589
Score = 850 bits (2195), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/601 (68%), Positives = 486/601 (80%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A
Sbjct: 1 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSAL 59
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D + AGA++
Sbjct: 60 SLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAATSVAGAVQ 117
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S +LA +AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 118 SQRLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 177
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 178 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 237
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM +MGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 238 PHGCHAQYMASMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLR 286
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 287 YACEFLMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 346
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 347 CDGAALYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 406
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 407 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K ++ D R++ +DEL + EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTTIHSRLNDLRVQSMDELSSVAGEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 527 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHA 586
Query: 676 F 676
Sbjct: 587 L 587
>gi|363547544|gb|AEW26815.1| phytochrome P [Cycas ferruginea]
Length = 589
Score = 850 bits (2195), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/601 (68%), Positives = 486/601 (80%), Gaps = 16/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCHATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD +K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSKTKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 F 676
Sbjct: 587 L 587
>gi|363547687|gb|AEW26886.1| phytochrome P [Encephalartos cycadifolius]
Length = 590
Score = 850 bits (2195), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/601 (68%), Positives = 487/601 (81%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSLPGGVIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM +MGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMASMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+ EMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENAEMDAIHSLQLILRGSFQDIHDSETKTMIHSRLNDLRVQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|406685435|gb|AFS51158.1| phytochrome P, partial [Agathis corbassonii]
Length = 659
Score = 850 bits (2195), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/632 (65%), Positives = 497/632 (78%), Gaps = 23/632 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDAL----- 120
AYL R+QRG IQPFGCM+AV+E F ++ YSENA EMLDL P +VPN+++ +A+
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFRIIAYSENALEMLDLMPQSVPNMDRDEAMGSHGG 60
Query: 121 ----TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
T+G+DVR LFT A AL+KAA E++L+NPI +H + + KPFYAI+HRIDVG+V
Sbjct: 61 RRVITIGMDVRALFTPESARALEKAAMAQEISLMNPIGVHSQNTNKPFYAIVHRIDVGMV 120
Query: 177 IDLEPVNPDDVPVTAAG-----ALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLT 231
IDLEPV AG +++S KLA +AISRLQS +G+I +LCD +V +V +LT
Sbjct: 121 IDLEPVRTGSGGGGVAGLAAAGSVQSQKLAVRAISRLQS--AGDIGVLCDTVVEDVRELT 178
Query: 232 GYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCL 291
GYDRVMVYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC
Sbjct: 179 GYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCR 238
Query: 292 APPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ 351
A PVKVIQ ++L QPL L GSTLRAP GCHA+YM NMGSIASLVM+V IN ED+
Sbjct: 239 AAPVKVIQAEELKQPLCLVGSTLRAPRGCHAQYMANMGSIASLVMAVVINGNEDQGGGSG 298
Query: 352 EQGR------KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHI 405
+ KLWGLVVCHHTSPR VPFPLRYACEFL+Q FG+Q+N E++++AQL EKHI
Sbjct: 299 GRSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQVAAQLTEKHI 358
Query: 406 LRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAE 465
LRTQT+LCDMLLRD+P+GIVT +P++MDLVKCDGAALYY G W+LGVTPTE QIKDIA+
Sbjct: 359 LRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIAD 418
Query: 466 WLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWG 525
WLLEYH STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWG
Sbjct: 419 WLLEYHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWG 478
Query: 526 GAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAE 585
GAKH KD R+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD
Sbjct: 479 GAKHHPDDKDDARRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDS 538
Query: 586 DSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTG 645
++K +V+ D +++ IDEL + +EMVRLIETA PILAVD++G +NGWN+K AELTG
Sbjct: 539 NTKTMVHGRLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAELTG 598
Query: 646 LTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
L V +A+G +LV DL+ +S D V ML A
Sbjct: 599 LPVGEAMGKSLVHDLIFHESADTVDKMLCHAL 630
>gi|39777231|gb|AAR30885.1| phytochrome A [Sorghum bicolor]
gi|39777233|gb|AAR30886.1| phytochrome A [Sorghum bicolor]
Length = 1131
Score = 850 bits (2195), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/667 (62%), Positives = 503/667 (75%), Gaps = 12/667 (1%)
Query: 22 NARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSNVP---SSTVSAYLQRVQRGRL 76
AR+ AQT++DA+L +++ES FDYS V ST + S V AYLQ +QRG+L
Sbjct: 21 QARILAQTTLDAELNAEYEESGDSFDYSKLVEAQRSTPSEQQGRSGKVIAYLQHIQRGKL 80
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGC++A+DE++F V+ +SENAPEML HAVPN++ L +G +VR+LFT GA
Sbjct: 81 IQPFGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLGIGTNVRSLFTDPGAT 140
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
ALQKA F +V+LLNPIL+ CKTSGKPFYAI+HR LV+D EPV P + P TAAGAL+
Sbjct: 141 ALQKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQ 200
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
SYKLAAKAIS++QSLP G++ LC+ +V EV +LTGYDRVM YKFHEDEHGEV AE +P
Sbjct: 201 SYKLAAKAISKIQSLPGGSMEALCNTVVKEVFELTGYDRVMAYKFHEDEHGEVFAEITKP 260
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
+EPYLG HYPATDIPQA+RFL MKNKVRMICDC A VK+I+D+ L +SLCGSTLRA
Sbjct: 261 GIEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKSVKIIEDEALSIDISLCGSTLRA 320
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDE------LDNDQEQGRKLWGLVVCHHTSPRF 370
PH CH +YMENM SIASLVM+V +NE E++ Q++ ++LWGL+VCHH SPR+
Sbjct: 321 PHSCHLQYMENMNSIASLVMAVVVNENEEDDEPGPEQPPQQQKKKRLWGLIVCHHESPRY 380
Query: 371 VPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD-SPVGIVTQTP 429
VPFPLRYACEFL QVF V VNKE EL Q+REK ILR QT+L DML ++ SP+ IV+ +P
Sbjct: 381 VPFPLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKEASPLSIVSGSP 440
Query: 430 NVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPG 489
N+MDLVKCDGAAL Y K+W L PTE QI+DIA WL E H STGLSTDSL +AGYPG
Sbjct: 441 NIMDLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDAGYPG 500
Query: 490 ALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAF 549
A +LGD +CG+A KITSKD LFWFRSHTA EIKWGGAKHD KD R+MHPR SFKAF
Sbjct: 501 AASLGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLSFKAF 560
Query: 550 LEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRII 609
LEVVK +SLPW D EMDAIHSLQLILRG+L D + ++ D +++ + EL+ +
Sbjct: 561 LEVVKMKSLPWSDYEMDAIHSLQLILRGTLNDALKPVQASGLDNQIGDLKLDGLAELQAV 620
Query: 610 TNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVK 669
T+EMVRL+ETA VPILAVD +G VNGWN K AEL+GL VD+AIG ++ LV SV +V+
Sbjct: 621 TSEMVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHILTLVEDSSVSIVQ 680
Query: 670 NMLSSAF 676
ML A
Sbjct: 681 RMLYLAL 687
>gi|327242615|gb|AEA41043.1| phytochrome B [Amphicarpaea edgeworthii]
Length = 1105
Score = 850 bits (2195), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/675 (61%), Positives = 508/675 (75%), Gaps = 22/675 (3%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ + DA+L F++S FDYS S+ I+S T VP ++AYL ++QRG I
Sbjct: 2 SKAMAQYTEDARLHAVFEQSGESGKSFDYSQSIRITSET--VPEQQITAYLLKIQRGGFI 59
Query: 78 QPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD---ALTLGIDVRTLFTSSG 134
QPFG MIAVDE++F ++ YS+NA +ML + P +VP+++ D A LG DVRTLFT S
Sbjct: 60 QPFGSMIAVDERSFRIMAYSDNARDMLGIIPQSVPSMDDDDKLHAFGLGTDVRTLFTHSS 119
Query: 135 AAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGA 194
L+KA + E++L+NPI IH + SG+PFY I HR+DVG+VIDLEP +D ++ AGA
Sbjct: 120 GVLLEKAFSAREISLMNPIWIHSRISGRPFYGIFHRVDVGIVIDLEPARTEDPALSIAGA 179
Query: 195 LKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECR 254
++S KLA +AIS+LQSLP GN+ LLCD +V V +LTGYDRVMVYKFHEDEHGEVVAE +
Sbjct: 180 VQSQKLAVRAISKLQSLPGGNVKLLCDTVVESVRELTGYDRVMVYKFHEDEHGEVVAESK 239
Query: 255 RPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTL 314
RPDLEPY+G HYPATDIPQASRFL +N+VRMI DC A V+V+QD+ L QPL L GSTL
Sbjct: 240 RPDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHASSVRVMQDEALLQPLCLVGSTL 299
Query: 315 RAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFP 374
RAPHGCHA+YM NMGSIASLVM+V IN DE +LWGLVVCHHTS R +PFP
Sbjct: 300 RAPHGCHAQYMANMGSIASLVMAVIIN-GNDEDGIGSRSSMRLWGLVVCHHTSARCIPFP 358
Query: 375 LRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDL 434
LRYACEFL+Q FG+Q+N E++L+ Q EK +LRTQT+LCDMLLRDSP GIVTQ+P++M+L
Sbjct: 359 LRYACEFLMQAFGLQLNMELQLAVQSMEKRVLRTQTLLCDMLLRDSPTGIVTQSPSIMNL 418
Query: 435 VKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALG 494
VKCDGAALYYRG LGVTPTE QI+DI EWLL +H STGLSTDSL +AGYPGA LG
Sbjct: 419 VKCDGAALYYRGNYCPLGVTPTEAQIRDIIEWLLAFHGDSTGLSTDSLADAGYPGAALLG 478
Query: 495 DAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVK 554
DAVCG+A IT KDFLFWFRSHT KEIKWGGAKH KD G++MHPRSSFKAFLEVVK
Sbjct: 479 DAVCGMAVAYITEKDFLFWFRSHTGKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVK 538
Query: 555 QRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVN-VPSVDDRIEKIDELRIITNEM 613
RS+PWE+ EMDAIHSLQLILR S +D DSK++V VP ++ R +DEL + EM
Sbjct: 539 SRSMPWENAEMDAIHSLQLILRDSFKDAEHRDSKVVVPCVPKLELR--GVDELSSVAREM 596
Query: 614 VRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNML 672
VRLIETA PI AVD G++NGWN+K +ELTGL V++A+G +L+ DLV +S + V +L
Sbjct: 597 VRLIETATAPIFAVDVDGHINGWNAKVSELTGLAVEEAMGKSLIRDLVFKESEETVDRLL 656
Query: 673 SSAF-------LAIW 680
S A LA W
Sbjct: 657 SRALKGILSNTLAFW 671
>gi|39777229|gb|AAR30884.1| phytochrome A [Sorghum bicolor]
Length = 1131
Score = 850 bits (2195), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/667 (62%), Positives = 503/667 (75%), Gaps = 12/667 (1%)
Query: 22 NARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSNVP---SSTVSAYLQRVQRGRL 76
AR+ AQT++DA+L +++ES FDYS V ST + S V AYLQ +QRG+L
Sbjct: 21 QARILAQTTLDAELNAEYEESGDSFDYSKLVEAQRSTPSEQQGRSGKVIAYLQHIQRGKL 80
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGC++A+DE++F V+ +SENAPEML HAVPN++ L +G +VR+LFT GA
Sbjct: 81 IQPFGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLGIGTNVRSLFTDPGAT 140
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
ALQKA F +V+LLNPIL+ CKTSGKPFYAI+HR LV+D EPV P + P TAAGAL+
Sbjct: 141 ALQKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQ 200
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
SYKLAAKAIS++QSLP G++ LC+ +V EV +LTGYDRVM YKFHEDEHGEV AE +P
Sbjct: 201 SYKLAAKAISKIQSLPGGSMEALCNTVVKEVFELTGYDRVMAYKFHEDEHGEVFAEITKP 260
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
+EPYLG HYPATDIPQA+RFL MKNKVRMICDC A VK+I+D+ L +SLCGSTLRA
Sbjct: 261 GIEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKSVKIIEDEALSIDISLCGSTLRA 320
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDE------LDNDQEQGRKLWGLVVCHHTSPRF 370
PH CH +YMENM SIASLVM+V +NE E++ Q++ ++LWGL+VCHH SPR+
Sbjct: 321 PHSCHLQYMENMNSIASLVMAVVVNENEEDDEPGPEQPPQQQKKKRLWGLIVCHHESPRY 380
Query: 371 VPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD-SPVGIVTQTP 429
VPFPLRYACEFL QVF V VNKE EL Q+REK ILR QT+L DML ++ SP+ IV+ +P
Sbjct: 381 VPFPLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKEASPLSIVSGSP 440
Query: 430 NVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPG 489
N+MDLVKCDGAAL Y K+W L PTE QI+DIA WL E H STGLSTDSL +AGYPG
Sbjct: 441 NIMDLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDAGYPG 500
Query: 490 ALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAF 549
A +LGD +CG+A KITSKD LFWFRSHTA EIKWGGAKHD KD R+MHPR SFKAF
Sbjct: 501 AASLGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLSFKAF 560
Query: 550 LEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRII 609
LEVVK +SLPW D EMDAIHSLQLILRG+L D + ++ D +++ + EL+ +
Sbjct: 561 LEVVKMKSLPWSDYEMDAIHSLQLILRGTLNDALKPVQASGLDNQIGDLKLDGLAELQAV 620
Query: 610 TNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVK 669
T+EMVRL+ETA VPILAVD +G VNGWN K AEL+GL VD+AIG ++ LV SV +V+
Sbjct: 621 TSEMVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHILTLVEDSSVSIVQ 680
Query: 670 NMLSSAF 676
ML A
Sbjct: 681 RMLYLAL 687
>gi|11134026|sp|P93526.1|PHYA_SORBI RecName: Full=Phytochrome a
gi|1800215|gb|AAB41397.1| phytochrome A [Sorghum bicolor]
gi|39777227|gb|AAR30883.1| phytochrome A [Sorghum bicolor]
Length = 1131
Score = 850 bits (2195), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/667 (62%), Positives = 503/667 (75%), Gaps = 12/667 (1%)
Query: 22 NARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSNVP---SSTVSAYLQRVQRGRL 76
AR+ AQT++DA+L +++ES FDYS V ST + S V AYLQ +QRG+L
Sbjct: 21 QARILAQTTLDAELNAEYEESGDSFDYSKLVEAQRSTPSEQQGRSGKVIAYLQHIQRGKL 80
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGC++A+DE++F V+ +SENAPEML HAVPN++ L +G +VR+LFT GA
Sbjct: 81 IQPFGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLGIGTNVRSLFTDPGAT 140
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
ALQKA F +V+LLNPIL+ CKTSGKPFYAI+HR LV+D EPV P + P TAAGAL+
Sbjct: 141 ALQKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQ 200
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
SYKLAAKAIS++QSLP G++ LC+ +V EV +LTGYDRVM YKFHEDEHGEV AE +P
Sbjct: 201 SYKLAAKAISKIQSLPGGSMEALCNTVVKEVFELTGYDRVMAYKFHEDEHGEVFAEITKP 260
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
+EPYLG HYPATDIPQA+RFL MKNKVRMICDC A VK+I+D+ L +SLCGSTLRA
Sbjct: 261 GIEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKSVKIIEDEALSIDISLCGSTLRA 320
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDE------LDNDQEQGRKLWGLVVCHHTSPRF 370
PH CH +YMENM SIASLVM+V +NE E++ Q++ ++LWGL+VCHH SPR+
Sbjct: 321 PHSCHLQYMENMNSIASLVMAVVVNENEEDDEPGPEQPPQQQKKKRLWGLIVCHHESPRY 380
Query: 371 VPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD-SPVGIVTQTP 429
VPFPLRYACEFL QVF V VNKE EL Q+REK ILR QT+L DML ++ SP+ IV+ +P
Sbjct: 381 VPFPLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKEASPLSIVSGSP 440
Query: 430 NVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPG 489
N+MDLVKCDGAAL Y K+W L PTE QI+DIA WL E H STGLSTDSL +AGYPG
Sbjct: 441 NIMDLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDAGYPG 500
Query: 490 ALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAF 549
A +LGD +CG+A KITSKD LFWFRSHTA EIKWGGAKHD KD R+MHPR SFKAF
Sbjct: 501 AASLGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLSFKAF 560
Query: 550 LEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRII 609
LEVVK +SLPW D EMDAIHSLQLILRG+L D + ++ D +++ + EL+ +
Sbjct: 561 LEVVKMKSLPWSDYEMDAIHSLQLILRGTLNDALKPVQASGLDNQIGDLKLDGLAELQAV 620
Query: 610 TNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVK 669
T+EMVRL+ETA VPILAVD +G VNGWN K AEL+GL VD+AIG ++ LV SV +V+
Sbjct: 621 TSEMVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHILTLVEDSSVSIVQ 680
Query: 670 NMLSSAF 676
ML A
Sbjct: 681 RMLYLAL 687
>gi|39777239|gb|AAR30889.1| phytochrome A [Sorghum bicolor]
gi|39777245|gb|AAR30892.1| phytochrome A [Sorghum bicolor subsp. verticilliflorum]
Length = 1131
Score = 850 bits (2195), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/667 (62%), Positives = 503/667 (75%), Gaps = 12/667 (1%)
Query: 22 NARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSNVP---SSTVSAYLQRVQRGRL 76
AR+ AQT++DA+L +++ES FDYS V ST + S V AYLQ +QRG+L
Sbjct: 21 QARILAQTTLDAELNAEYEESGDSFDYSKLVEAQRSTPSEQQGRSGKVIAYLQHIQRGKL 80
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGC++A+DE++F V+ +SENAPEML HAVPN++ L +G +VR+LFT GA
Sbjct: 81 IQPFGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLGIGTNVRSLFTDPGAT 140
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
ALQKA F +V+LLNPIL+ CKTSGKPFYAI+HR LV+D EPV P + P TAAGAL+
Sbjct: 141 ALQKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQ 200
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
SYKLAAKAIS++QSLP G++ LC+ +V EV +LTGYDRVM YKFHEDEHGEV AE +P
Sbjct: 201 SYKLAAKAISKIQSLPGGSMEALCNTVVKEVFELTGYDRVMAYKFHEDEHGEVFAEITKP 260
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
+EPYLG HYPATDIPQA+RFL MKNKVRMICDC A VK+I+D+ L +SLCGSTLRA
Sbjct: 261 GIEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKSVKIIEDEALSIDISLCGSTLRA 320
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDE------LDNDQEQGRKLWGLVVCHHTSPRF 370
PH CH +YMENM SIASLVM+V +NE E++ Q++ ++LWGL+VCHH SPR+
Sbjct: 321 PHSCHLQYMENMNSIASLVMAVVVNENEEDDEPGPEQPPQQQKKKRLWGLIVCHHESPRY 380
Query: 371 VPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD-SPVGIVTQTP 429
VPFPLRYACEFL QVF V VNKE EL Q+REK ILR QT+L DML ++ SP+ IV+ +P
Sbjct: 381 VPFPLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKEASPLSIVSGSP 440
Query: 430 NVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPG 489
N+MDLVKCDGAAL Y K+W L PTE QI+DIA WL E H STGLSTDSL +AGYPG
Sbjct: 441 NIMDLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDAGYPG 500
Query: 490 ALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAF 549
A +LGD +CG+A KITSKD LFWFRSHTA EIKWGGAKHD KD R+MHPR SFKAF
Sbjct: 501 AASLGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLSFKAF 560
Query: 550 LEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRII 609
LEVVK +SLPW D EMDAIHSLQLILRG+L D + ++ D +++ + EL+ +
Sbjct: 561 LEVVKMKSLPWSDYEMDAIHSLQLILRGTLNDALKPVQASGLDNQIGDLKLDGLAELQAV 620
Query: 610 TNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVK 669
T+EMVRL+ETA VPILAVD +G VNGWN K AEL+GL VD+AIG ++ LV SV +V+
Sbjct: 621 TSEMVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHILTLVEDSSVSIVQ 680
Query: 670 NMLSSAF 676
ML A
Sbjct: 681 RMLYLAL 687
>gi|242033161|ref|XP_002463975.1| hypothetical protein SORBIDRAFT_01g009930 [Sorghum bicolor]
gi|241917829|gb|EER90973.1| hypothetical protein SORBIDRAFT_01g009930 [Sorghum bicolor]
Length = 1131
Score = 850 bits (2195), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/667 (62%), Positives = 503/667 (75%), Gaps = 12/667 (1%)
Query: 22 NARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSNVP---SSTVSAYLQRVQRGRL 76
AR+ AQT++DA+L +++ES FDYS V ST + S V AYLQ +QRG+L
Sbjct: 21 QARILAQTTLDAELNAEYEESGDSFDYSKLVEAQRSTPSEQQGRSGKVIAYLQHIQRGKL 80
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGC++A+DE++F V+ +SENAPEML HAVPN++ L +G +VR+LFT GA
Sbjct: 81 IQPFGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLGIGTNVRSLFTDPGAT 140
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
ALQKA F +V+LLNPIL+ CKTSGKPFYAI+HR LV+D EPV P + P TAAGAL+
Sbjct: 141 ALQKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQ 200
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
SYKLAAKAIS++QSLP G++ LC+ +V EV +LTGYDRVM YKFHEDEHGEV AE +P
Sbjct: 201 SYKLAAKAISKIQSLPGGSMEALCNTVVKEVFELTGYDRVMAYKFHEDEHGEVFAEITKP 260
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
+EPYLG HYPATDIPQA+RFL MKNKVRMICDC A VK+I+D+ L +SLCGSTLRA
Sbjct: 261 GIEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKSVKIIEDEALSIDISLCGSTLRA 320
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDE------LDNDQEQGRKLWGLVVCHHTSPRF 370
PH CH +YMENM SIASLVM+V +NE E++ Q++ ++LWGL+VCHH SPR+
Sbjct: 321 PHSCHLQYMENMNSIASLVMAVVVNENEEDDEPGPEQPPQQQKKKRLWGLIVCHHESPRY 380
Query: 371 VPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD-SPVGIVTQTP 429
VPFPLRYACEFL QVF V VNKE EL Q+REK ILR QT+L DML ++ SP+ IV+ +P
Sbjct: 381 VPFPLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKEASPLSIVSGSP 440
Query: 430 NVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPG 489
N+MDLVKCDGAAL Y K+W L PTE QI+DIA WL E H STGLSTDSL +AGYPG
Sbjct: 441 NIMDLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDAGYPG 500
Query: 490 ALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAF 549
A +LGD +CG+A KITSKD LFWFRSHTA EIKWGGAKHD KD R+MHPR SFKAF
Sbjct: 501 AASLGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLSFKAF 560
Query: 550 LEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRII 609
LEVVK +SLPW D EMDAIHSLQLILRG+L D + ++ D +++ + EL+ +
Sbjct: 561 LEVVKMKSLPWSDYEMDAIHSLQLILRGTLNDALKPVQASGLDNQIGDLKLDGLAELQAV 620
Query: 610 TNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVK 669
T+EMVRL+ETA VPILAVD +G VNGWN K AEL+GL VD+AIG ++ LV SV +V+
Sbjct: 621 TSEMVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHILTLVEDSSVSIVQ 680
Query: 670 NMLSSAF 676
ML A
Sbjct: 681 RMLYLAL 687
>gi|363547773|gb|AEW26928.1| phytochrome P [Lepidozamia peroffskyana]
Length = 590
Score = 849 bits (2194), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/601 (67%), Positives = 489/601 (81%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA MLDLAP +VP +EQ+ LT+G D+RTLFT S A
Sbjct: 2 IQPFGCMLAVEECTFRIIAYSENAVGMLDLAPQSVPTMEQE-FLTIGTDIRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H ++SGKPFYA++HRIDVG+VID EPV D ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSRSSGKPFYAVVHRIDVGMVIDFEPVG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSLPVGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYP+TDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPSTDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMVNMGSIASLVMAVVIN-----------GNMKLWGLVVCHHTSPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EK ILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKRILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTP E QI+DIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWVLGVTPAEAQIEDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|39777243|gb|AAR30891.1| phytochrome A [Sorghum bicolor subsp. verticilliflorum]
Length = 1131
Score = 849 bits (2194), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/667 (62%), Positives = 503/667 (75%), Gaps = 12/667 (1%)
Query: 22 NARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSNVP---SSTVSAYLQRVQRGRL 76
AR+ AQT++DA+L +++ES FDYS V ST + S V AYLQ +QRG+L
Sbjct: 21 QARILAQTTLDAELNAEYEESGDSFDYSKLVEAQRSTPSEQQGRSGKVIAYLQHIQRGKL 80
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGC++A+DE++F V+ +SENAPEML HAVPN++ L +G +VR+LFT GA
Sbjct: 81 IQPFGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLGIGTNVRSLFTDPGAT 140
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
ALQKA F +V+LLNPIL+ CKTSGKPFYAI+HR LV+D EPV P + P TAAGAL+
Sbjct: 141 ALQKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQ 200
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
SYKLAAKAIS++QSLP G++ LC+ +V EV +LTGYDRVM YKFHEDEHGEV AE +P
Sbjct: 201 SYKLAAKAISKIQSLPGGSMEALCNTVVKEVFELTGYDRVMAYKFHEDEHGEVFAEITKP 260
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
+EPYLG HYPATDIPQA+RFL MKNKVRMICDC A VK+I+D+ L +SLCGSTLRA
Sbjct: 261 GIEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKSVKIIEDEALSIDISLCGSTLRA 320
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDE------LDNDQEQGRKLWGLVVCHHTSPRF 370
PH CH +YMENM SIASLVM+V +NE E++ Q++ ++LWGL+VCHH SPR+
Sbjct: 321 PHSCHLQYMENMNSIASLVMAVVVNENEEDDEPGPEQPPQQQKKKRLWGLIVCHHESPRY 380
Query: 371 VPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD-SPVGIVTQTP 429
VPFPLRYACEFL QVF V VNKE EL Q+REK ILR QT+L DML ++ SP+ IV+ +P
Sbjct: 381 VPFPLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKEASPLSIVSGSP 440
Query: 430 NVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPG 489
N+MDLVKCDGAAL Y K+W L PTE QI+DIA WL E H STGLSTDSL +AGYPG
Sbjct: 441 NIMDLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDAGYPG 500
Query: 490 ALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAF 549
A +LGD +CG+A KITSKD LFWFRSHTA EIKWGGAKHD KD R+MHPR SFKAF
Sbjct: 501 AASLGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLSFKAF 560
Query: 550 LEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRII 609
LEVVK +SLPW D EMDAIHSLQLILRG+L D + ++ D +++ + EL+ +
Sbjct: 561 LEVVKMKSLPWSDYEMDAIHSLQLILRGTLNDALKPVQASGLDNQIGDLKLDGLAELQAV 620
Query: 610 TNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVK 669
T+EMVRL+ETA VPILAVD +G VNGWN K AEL+GL VD+AIG ++ LV SV +V+
Sbjct: 621 TSEMVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHILTLVEDSSVSIVQ 680
Query: 670 NMLSSAF 676
ML A
Sbjct: 681 RMLYLAL 687
>gi|363547579|gb|AEW26832.1| phytochrome P [Cycas pectinata]
Length = 589
Score = 849 bits (2194), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/601 (67%), Positives = 486/601 (80%), Gaps = 16/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA + ISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRTISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 PHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAK +KWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKGVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 F 676
Sbjct: 587 L 587
>gi|309256335|gb|ADO60995.1| phytochrome b [Helianthus annuus]
Length = 683
Score = 849 bits (2194), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/669 (61%), Positives = 505/669 (75%), Gaps = 10/669 (1%)
Query: 14 SSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYL 68
S+SAR ++ AQ ++DA+L +++S FDYS S I ++T ++ ++AYL
Sbjct: 4 STSARVDSMSKAIAQYALDARLHAVYEQSGESGKSFDYSQS--IKTTTDSIAEQQMTAYL 61
Query: 69 QRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRT 128
++QRG IQPFGCMIA+D F V+ +SENA E L LAP +VP++++ + LT+G DV+T
Sbjct: 62 SKIQRGGHIQPFGCMIAIDNTTFRVIAFSENARERLGLAPQSVPSLDKPEILTIGTDVKT 121
Query: 129 LFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVP 188
LFT S A L++A E+ LLNP+ +H K SGKPFYAILHRIDVG+VIDLEP +D
Sbjct: 122 LFTPSSALLLERAFRAREITLLNPVWVHSKNSGKPFYAILHRIDVGIVIDLEPARTEDPA 181
Query: 189 VTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGE 248
++ AGA++S KLA +AIS LQ+LP G+I LLCD +V V +LTGYDRVMVYKFHEDEHGE
Sbjct: 182 LSIAGAVQSQKLAVRAISNLQALPGGDIKLLCDTVVQNVRELTGYDRVMVYKFHEDEHGE 241
Query: 249 VVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLS 308
VVAE +RPDL+PY+G HYPATDIPQASRFL +N+VRMI DC A PV+V+QD L QPL
Sbjct: 242 VVAESKRPDLDPYIGLHYPATDIPQASRFLFRQNRVRMIVDCHANPVRVVQDDNLMQPLC 301
Query: 309 LCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSP 368
L GSTLRAPHGCHA+YM NMGSIASL ++V IN ED G LWGLVVCHHTS
Sbjct: 302 LVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNEDGASGRGTMG--LWGLVVCHHTSA 359
Query: 369 RFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQT 428
R +PFPLRYACEFL+Q FG+Q+N E++L++Q+ EK ILRTQT+LCDM+LRDSP GIVTQ+
Sbjct: 360 RCIPFPLRYACEFLMQAFGLQLNLELQLASQMLEKRILRTQTLLCDMILRDSPTGIVTQS 419
Query: 429 PNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYP 488
P++MDLVKCDGAALYY+ K + LG+TPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 420 PSIMDLVKCDGAALYYQEKYYPLGITPTESQIKDIVEWLSACHTDSTGLSTDSLADAGYX 479
Query: 489 GALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKA 548
GA +LGDAVCG+A ITSKDFLFWFRSHTAKEIKWGGAKH KD G++MHPRSSF A
Sbjct: 480 GAASLGDAVCGMAVAYITSKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFNA 539
Query: 549 FLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRI 608
FLEVVK RS WE+ EMDAIHSLQLILR S +D SK +V V + +E +DEL
Sbjct: 540 FLEVVKSRSSXWENAEMDAIHSLQLILRDSFKDPDENXSKAVVKVQMXEMGLEGVDELSS 599
Query: 609 ITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDV 667
+ EMVRLIETA PI AVD G +NGWN+K AELTGL+V++A+G +LV DL+ +S +
Sbjct: 600 VAREMVRLIETATAPIFAVDVEGRINGWNAKIAELTGLSVNEAMGKSLVRDLIYKESEET 659
Query: 668 VKNMLSSAF 676
V +L A
Sbjct: 660 VTKLLDHAL 668
>gi|363547796|gb|AEW26938.1| phytochrome P [Macrozamia miquelii]
Length = 590
Score = 849 bits (2194), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/601 (67%), Positives = 487/601 (81%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ F ++ YSENA MLDLAP +VP +EQ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMEQV-FLTIGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H ++SGKPFYAI+HRIDVG+VID EPV D ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSRSSGKPFYAIVHRIDVGMVIDFEPVG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+V IN KLWGLVVCHHT PR VPFPLR
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVIN-----------GNMKLWGLVVCHHTCPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWVLGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFW RSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWLRSHTAKEIKWGGAKHHPNDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D +++ +DEL + +EM RL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLKVQSMDELSSVASEMARL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLCHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|363547527|gb|AEW26807.1| phytochrome P [Cycas clivicola]
Length = 589
Score = 849 bits (2194), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/601 (68%), Positives = 487/601 (81%), Gaps = 16/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG H PATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHCPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 PHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 F 676
Sbjct: 587 L 587
>gi|363547826|gb|AEW26953.1| phytochrome P [Zamia acuminata]
Length = 590
Score = 849 bits (2194), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/601 (67%), Positives = 489/601 (81%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQP GCM+AV+E+ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT + A
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERE-LLTIGTDVRTLFTPASAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NP+ +H K+SGKPFYAILHRIDVG+VID EPV ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPVWMHSKSSGKPFYAILHRIDVGMVIDFEPVG--GAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGS+ASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMN-----------VNMKLWGLVVCHHTSPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLVAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTPTE QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDTETKTMIHSRLTDLRLQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|363547713|gb|AEW26899.1| phytochrome P [Encephalartos kisambo]
Length = 590
Score = 849 bits (2194), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/601 (68%), Positives = 486/601 (80%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
L+KAA E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D + AGA++
Sbjct: 61 PLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAATSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM +MGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMASMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRVVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYP A +LGDA
Sbjct: 348 CDGAALYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|363547709|gb|AEW26897.1| phytochrome P [Encephalartos inopinus]
Length = 590
Score = 849 bits (2194), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/601 (67%), Positives = 488/601 (81%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D + AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAATSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCHATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM +MGSIASLV++V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMASMGSIASLVVAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWALGVTPAEAQIKDIADWLLECHSDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D +++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLKVQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|363547895|gb|AEW26987.1| phytochrome P [Araucaria heterophylla]
Length = 558
Score = 849 bits (2193), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/570 (70%), Positives = 473/570 (82%), Gaps = 14/570 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VPN++ + +T+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEETTFLIIAYSENAVEMLDLMPQSVPNMDGR-VMTIGTDVRTLFTPSSAR 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
L+KAA E++L+NPI +H K + KPFYAI+HRIDVG+VIDLEPV D ++AAGA++
Sbjct: 61 LLEKAAMAHEISLMNPIWVHSKNTNKPFYAIVHRIDVGMVIDLEPVG--DAALSAAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP+G+I LLCD +V +V +LTGYDRVMVYKFHEDEHGEV+AE RR
Sbjct: 119 SQKLAVRAISRLQSLPAGDIGLLCDTVVEDVRELTGYDRVMVYKFHEDEHGEVLAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ ++L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRAAPVKVIQAEELKQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVIN-----------GNMKLWGLVVCHHTSPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+LCDMLLRD+P+GIVT +P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRDAPIGIVTHSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G W+LGVTPTE QIKDIA+WLLEYH STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMCWMLGVTPTEAQIKDIADWLLEYHVDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +V+ D +++ IDEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSNTKTMVHARLNDLKLQGIDELSCVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGL 646
IETA PILAVD++G +NGWN+K AELTGL
Sbjct: 528 IETATAPILAVDSNGLINGWNAKVAELTGL 557
>gi|363547541|gb|AEW26814.1| phytochrome P [Cycas edentata]
gi|363547567|gb|AEW26826.1| phytochrome P [Cycas micronesica]
gi|363547625|gb|AEW26855.1| phytochrome P [Cycas zeylanica]
Length = 589
Score = 849 bits (2193), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/601 (67%), Positives = 486/601 (80%), Gaps = 16/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFK FLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKVFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 F 676
Sbjct: 587 L 587
>gi|363547711|gb|AEW26898.1| phytochrome P [Encephalartos ituriensis]
Length = 590
Score = 849 bits (2193), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/601 (67%), Positives = 487/601 (81%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D + AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAATSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM +MGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMASMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N EV+L+AQL E+ IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMEVQLAAQLTERRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYP A +LGDA
Sbjct: 348 CDGAALYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|363547812|gb|AEW26946.1| phytochrome P [Macrozamia reducta]
Length = 590
Score = 849 bits (2193), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/601 (67%), Positives = 488/601 (81%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ F ++ YSENA MLDLAP +VP +EQ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMEQV-FLTIGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H ++SGKP YAI+HRIDVG+VID EPV D ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSRSSGKPSYAIVHRIDVGMVIDFEPVG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVIN-----------GNMKLWGLVVCHHTSPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL E+HIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTERHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWVLGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSF+AFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFRAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D +++ +DEL + +EM RL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLKVQSMDELSSVASEMARL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLCHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|363547878|gb|AEW26979.1| phytochrome P [Zamia pseudomonticola]
Length = 590
Score = 849 bits (2193), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/601 (67%), Positives = 490/601 (81%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQP GCM+AV+E+ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT + A
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERE-LLTIGTDVRTLFTPASAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NP+ +H K+SGKPFYAILHRIDVG+VID EPV ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPVWMHSKSSGKPFYAILHRIDVGMVIDFEPVG--GAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGS+ASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMN-----------VNMKLWGLVVCHHTSPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LG+TPTE QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWMLGMTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTA EIKWGGAKH + KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTANEIKWGGAKHHTDDKDEGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLTDLRLQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|363547744|gb|AEW26914.1| phytochrome P [Encephalartos princeps]
Length = 590
Score = 848 bits (2192), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/601 (68%), Positives = 485/601 (80%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTVGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D + AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAATSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQPNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYP A +LGDA
Sbjct: 348 CDGAALYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+ EMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENAEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|363547573|gb|AEW26829.1| phytochrome P [Cycas nongnoochiae]
Length = 589
Score = 848 bits (2192), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/601 (68%), Positives = 487/601 (81%), Gaps = 16/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 PHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNG N+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGRNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 F 676
Sbjct: 587 L 587
>gi|363547822|gb|AEW26951.1| phytochrome P [Microcycas calocoma]
Length = 590
Score = 848 bits (2192), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/601 (67%), Positives = 487/601 (81%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S
Sbjct: 2 IQPFGCMLAVEEGTFRIIAYSENAVGMLDLAPQSVPTMERE-LLTIGTDVRTLFTPSSGL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++LLNPI +H K+SGKPFY I+HRIDVG+VID+EPV D ++ AGA++
Sbjct: 61 SLEKAAAAQEISLLNPIWMHSKSSGKPFYVIVHRIDVGMVIDIEPVG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ++P G+I LLCD +V +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQAVPGGDIGLLCDTVVEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVSVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+V IN KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVIN-----------ANMKLWGLVVCHHTSPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L++QL EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLASQLTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTPTE QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWVLGVTPTESQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSH AKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHAAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS +D ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFRDIDDSETKTMIHSRLNDLRLQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A G +LV DLV +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEATGKSLVCDLVYEESMETVERLLRLA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|406685445|gb|AFS51163.1| phytochrome P, partial [Agathis moorei]
Length = 659
Score = 848 bits (2192), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/632 (65%), Positives = 497/632 (78%), Gaps = 23/632 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDAL----- 120
AYL R+QRG IQPFGCM+AV+E F ++ YS+NA EMLDL P +VPN+++ +A+
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFRIIAYSDNALEMLDLMPQSVPNMDRDEAMGSHGG 60
Query: 121 ----TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
T+G+DVR LFT A AL+KAA E++L+NPI +H + + KPFYAI+HRIDVG+V
Sbjct: 61 RRVITIGMDVRALFTPESARALEKAAMAQEISLMNPIGVHSQNTNKPFYAIVHRIDVGMV 120
Query: 177 IDLEPVNPDDVPVTAAG-----ALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLT 231
IDLEPV AG +++S KLA +AISRLQS +G++ +LCD +V +V +LT
Sbjct: 121 IDLEPVRTGSGGGGVAGLAAAGSVQSQKLAVRAISRLQS--AGDVGVLCDTVVEDVRELT 178
Query: 232 GYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCL 291
GYDRVMVYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC
Sbjct: 179 GYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCR 238
Query: 292 APPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ 351
A PVKVIQ ++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ED+
Sbjct: 239 AAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDQGGGSG 298
Query: 352 EQGR------KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHI 405
+ KLWGLVVCHHTSPR VPFPLRYACEFL+Q FG+Q+N E++++AQL EKHI
Sbjct: 299 GRSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQVAAQLTEKHI 358
Query: 406 LRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAE 465
LRTQT+LCDMLLRD+P+GIVT +P++MDLVKCDGAALYY G W+LGVTPTE QIKDIA+
Sbjct: 359 LRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIAD 418
Query: 466 WLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWG 525
WLLEYH STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWG
Sbjct: 419 WLLEYHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWG 478
Query: 526 GAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAE 585
GAKH KD R+MHPRSSFKAFLEV+K+RSLPWE+VEMDAIHSLQLILRGS QD
Sbjct: 479 GAKHHPDDKDDARRMHPRSSFKAFLEVIKRRSLPWENVEMDAIHSLQLILRGSFQDIDDS 538
Query: 586 DSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTG 645
++K +V+ D +++ IDEL + +EMVRLIETA PILAVD++ +NGWN+K AELTG
Sbjct: 539 NTKTMVHGRLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNALINGWNAKVAELTG 598
Query: 646 LTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
L V +A+G +LV DL+ +S D V ML A
Sbjct: 599 LPVGEAMGKSLVHDLIFHESADTVDKMLCHAL 630
>gi|363547621|gb|AEW26853.1| phytochrome P [Cycas xipholepis]
Length = 589
Score = 848 bits (2192), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/601 (68%), Positives = 485/601 (80%), Gaps = 16/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFPLR
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPFGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFK FLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKVFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 F 676
Sbjct: 587 L 587
>gi|363547707|gb|AEW26896.1| phytochrome P [Encephalartos humilis]
Length = 590
Score = 848 bits (2192), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/601 (67%), Positives = 487/601 (81%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEV AE RR
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVAAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM +MGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMASMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W LGVTP E QIKDIA+WLLE H TGLS DSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSMDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|363547876|gb|AEW26978.1| phytochrome P [Zamia portoricensis]
Length = 590
Score = 848 bits (2192), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/601 (67%), Positives = 488/601 (81%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQP GCM+AV+E+ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT + A
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERE-LLTIGTDVRTLFTPASAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NP+ +H K SGKPFYAILHRIDVG+VID EPV V ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPVWMHSKGSGKPFYAILHRIDVGMVIDFEPVG--GVAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELTQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGS+ASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMN-----------VNMKLWGLVVCHHTSPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLVAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTPTE QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
CG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 ACGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDTETKTMIHSRLTDLRLQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|363547810|gb|AEW26945.1| phytochrome P [Macrozamia polymorpha]
Length = 590
Score = 848 bits (2192), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/601 (67%), Positives = 487/601 (81%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ F ++ YSENA MLDLAP +VP +EQ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMEQV-FLTIGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++ +NPI +H ++SGKPFYAI+HRIDVG+VID EPV D ++ AGA++
Sbjct: 61 SLEKAAAAQEISFMNPIWMHSRSSGKPFYAIVHRIDVGMVIDFEPVG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDI QASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDISQASRFLFMQNRVRMICDCRATPVRVIQATELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVIN-----------GNMKLWGLVVCHHTSPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGV+P E QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWVLGVSPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D +++ +DEL + +EM RL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLKVQSMDELSSVASEMARL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLCHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|363547754|gb|AEW26919.1| phytochrome P [Encephalartos senticosus]
Length = 590
Score = 848 bits (2192), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/601 (68%), Positives = 486/601 (80%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D + AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAATSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N EV+L+AQL K IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMEVQLAAQLTGKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYP A +LGDA
Sbjct: 348 CDGAALYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|363547601|gb|AEW26843.1| phytochrome P [Cycas sexseminifera]
gi|363547613|gb|AEW26849.1| phytochrome P [Cycas tanqingii]
Length = 589
Score = 848 bits (2192), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/601 (67%), Positives = 487/601 (81%), Gaps = 16/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSVRAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV +LV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHNLVYEESVETVERLLYHA 586
Query: 676 F 676
Sbjct: 587 L 587
>gi|363547562|gb|AEW26824.1| phytochrome P [Cycas media subsp. media]
Length = 589
Score = 848 bits (2192), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/601 (67%), Positives = 485/601 (80%), Gaps = 16/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQSAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPFGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFK FLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKVFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 F 676
Sbjct: 587 L 587
>gi|363547689|gb|AEW26887.1| phytochrome P [Encephalartos dolomiticus]
Length = 590
Score = 848 bits (2192), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/601 (68%), Positives = 485/601 (80%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D + AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAATSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM +MGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMASMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W LGVTP E QIKDI EWLLE H TGLSTDSL +AGYP A +LGDA
Sbjct: 348 CDGAALYYGGMVWALGVTPAEAQIKDIVEWLLECHGDWTGLSTDSLADAGYPAAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 528 IETATAPILAVDCGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|363547866|gb|AEW26973.1| phytochrome P [Zamia neurophyllidia]
Length = 590
Score = 848 bits (2191), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/601 (67%), Positives = 487/601 (81%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQP GCM+AV+E+ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT + A
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERE-LLTIGTDVRTLFTPASAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NP+ +H K+SGKPFYAILHRIDVG+VID EPV ++ AGA +
Sbjct: 61 SLEKAAAAQEISLMNPVWMHSKSSGKPFYAILHRIDVGMVIDFEPVG--GAAMSVAGAAQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGS+ASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMN-----------VNMKLWGLVVCHHTSPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTPTE QIKDIA+WLLE H TGLSTDSL +AGYPG +LGDA
Sbjct: 348 CDGAALYYGGMVWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGTASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD +K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSKTKTMIHSRLTDLRLQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|363547619|gb|AEW26852.1| phytochrome P [Cycas tropophylla]
Length = 589
Score = 848 bits (2191), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/601 (67%), Positives = 487/601 (81%), Gaps = 16/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAREISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSVRAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDM LRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMFLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSLV+AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLVDAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV +LV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGLSLVHNLVYEESVETVERLLYHA 586
Query: 676 F 676
Sbjct: 587 L 587
>gi|207367148|dbj|BAG72094.1| phytochrome A [Glycine max]
gi|371940222|dbj|BAL45548.1| Phytochrome A1 [Glycine max]
gi|371940224|dbj|BAL45549.1| Phytochrome A1 [Glycine soja]
gi|371940226|dbj|BAL45550.1| Phytochrome A1 [Glycine soja]
gi|371940228|dbj|BAL45551.1| Phytochrome A1 [Glycine soja]
gi|371940230|dbj|BAL45552.1| Phytochrome A1 [Glycine soja]
gi|371940232|dbj|BAL45553.1| Phytochrome A1 [Glycine soja]
gi|371940234|dbj|BAL45554.1| Phytochrome A1 [Glycine soja]
gi|371940236|dbj|BAL45555.1| Phytochrome A1 [Glycine soja]
gi|371940238|dbj|BAL45556.1| Phytochrome A1 [Glycine max]
gi|371940240|dbj|BAL45557.1| Phytochrome A1 [Glycine max]
gi|371940242|dbj|BAL45558.1| Phytochrome A1 [Glycine max]
Length = 1130
Score = 848 bits (2191), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/671 (60%), Positives = 517/671 (77%), Gaps = 20/671 (2%)
Query: 27 AQTSIDAKLAEDFDESDFDYSTSVNISSSTS----NVPSS--TVSAYLQRVQRGRLIQPF 80
AQ ++DAK+ F+ES + S ++ S + N P S +AYL +QRG++IQPF
Sbjct: 23 AQATVDAKIHATFEESGSSFDYSSSVRVSGTADGVNQPRSDKVTTAYLNHMQRGKMIQPF 82
Query: 81 GCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQK 140
GC++A+DE+ V+ YSENAPEML + HAVP++ AL +G D++TLFT+ + LQK
Sbjct: 83 GCLLAIDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHPALGIGTDIKTLFTAPSVSGLQK 142
Query: 141 AANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKL 200
A +V+LLNPIL+HCKTSGKPFYAI+HR+ L++D EPV P +VP+TAAGAL+SYKL
Sbjct: 143 ALGCADVSLLNPILVHCKTSGKPFYAIVHRVTGSLIVDFEPVKPYEVPMTAAGALQSYKL 202
Query: 201 AAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEP 260
AAKAI+RLQSLPSGN+ LCD +V EV +LTGYDRVM YKFHED+HGEV+AE +P LEP
Sbjct: 203 AAKAITRLQSLPSGNMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVIAEITKPGLEP 262
Query: 261 YLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGC 320
YLG HYPATDIPQASRFL KNKVRMI DC A V+V+QD+KL L LCGSTLRAPH C
Sbjct: 263 YLGLHYPATDIPQASRFLFRKNKVRMIVDCHAKHVRVLQDEKLQFDLILCGSTLRAPHSC 322
Query: 321 HARYMENMGSIASLVMSVTINEAEDELDND--QEQGR-KLWGLVVCHHTSPRFVPFPLRY 377
HA+YM NM SIASLV++V +N+ E++ D D Q Q R +LWGLVVCH+T+PRFVPFPLRY
Sbjct: 323 HAQYMANMDSIASLVLAVVVNDNEEDGDTDAVQPQKRERLWGLVVCHNTTPRFVPFPLRY 382
Query: 378 ACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKC 437
ACEFL QVF V V+KE+EL Q+ EK+ILRTQ +LC ML+RD+P+GIV+++PN+MDLVKC
Sbjct: 383 ACEFLAQVFAVHVHKEIELEYQIIEKNILRTQALLC-MLMRDAPLGIVSESPNIMDLVKC 441
Query: 438 DGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAV 497
DGAAL YR K+W LGVTP+E QI++IA WL EYH STG STDSL +AG+P AL+LGD V
Sbjct: 442 DGAALIYRNKVWRLGVTPSEPQIREIALWLSEYHMDSTGFSTDSLFDAGFPSALSLGDVV 501
Query: 498 CGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRS 557
CG+A+V++T+KD +FWFRSHTA EI+WGGAKH++G KD R+MHPRSSFKAFLEVVK RS
Sbjct: 502 CGMASVRVTAKDMVFWFRSHTAAEIRWGGAKHEAGEKDDSRRMHPRSSFKAFLEVVKARS 561
Query: 558 LPWEDVEMDAIHSLQLILRGSLQDEVAE---DSKMI------VNVPSVDD-RIEKIDELR 607
LPW++ EMDAIHSLQ+ILR + +++ ++K I + + ++D +IE++ EL
Sbjct: 562 LPWKEYEMDAIHSLQIILRNAFKEDTESLDLNAKAINTRLSDLKIEGINDLKIERMQELE 621
Query: 608 IITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDV 667
+T+E+VRLI+TA VPILAVD G VNGWN K AELTGL + +A G L+ LV S D
Sbjct: 622 AVTSEIVRLIDTATVPILAVDVDGLVNGWNIKIAELTGLPIGEATGKHLLTLVEDSSTDR 681
Query: 668 VKNMLSSAFLA 678
VK ML+ A L
Sbjct: 682 VKKMLNLALLG 692
>gi|363547790|gb|AEW26936.1| phytochrome P [Macrozamia johnsonii]
Length = 590
Score = 848 bits (2191), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/601 (67%), Positives = 486/601 (80%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ F ++ YSENA MLDLAP +VP +EQ LT+G DVRTL T S A
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMEQV-FLTIGTDVRTLLTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H ++SGKPFYAI+HRIDVG+VID EPV D ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSRSSGKPFYAIVHRIDVGMVIDFEPVG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVGAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+V IN KLWGLVVCHHT PR VPFPLR
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVIN-----------GNMKLWGLVVCHHTCPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWVLGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D +++ +DEL + +EM RL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLKVQSMDELSSVASEMARL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLCHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|356572880|ref|XP_003554593.1| PREDICTED: phytochrome type A-like [Glycine max]
gi|227452663|dbj|BAH57342.1| phytochrome A [Glycine max]
gi|227452667|dbj|BAH57344.1| phytochrome A [Glycine max]
Length = 1130
Score = 848 bits (2191), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/675 (60%), Positives = 512/675 (75%), Gaps = 21/675 (3%)
Query: 19 SKQNARVAAQTSIDAKLAEDFDESDFDYSTSVNISSSTSNVPSS--------TVSAYLQR 70
S+ +AR AQT++DAKL F+ES + S ++ S + S S+YL +
Sbjct: 20 SRLSARRMAQTTLDAKLHATFEESGSSFDYSSSVRMSPAGTVSGDHQPRSDRATSSYLHQ 79
Query: 71 VQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLF 130
Q+ +LIQPFGC++A+DE+ V+ YSENAPEML + HAVP++ AL +G D+RT+F
Sbjct: 80 TQKIKLIQPFGCLLALDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHPALGIGTDIRTIF 139
Query: 131 TSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVT 190
T+ +AA+QKA FG+V+L NPIL+HCKTSGKPFYAI+HR+ ++ID EPV P +VP+T
Sbjct: 140 TAPSSAAIQKALRFGDVSLHNPILVHCKTSGKPFYAIIHRVTGSVIIDFEPVKPHEVPMT 199
Query: 191 AAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVV 250
A+GAL+SYKLAAKAI+RL+SL +GN+ LC+ +V EV +LTGYDRVM YKFHED+HGEV+
Sbjct: 200 ASGALQSYKLAAKAITRLESLTTGNMETLCNTMVREVFELTGYDRVMAYKFHEDDHGEVI 259
Query: 251 AECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLC 310
AE +RP LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V V+QDKK+ L+LC
Sbjct: 260 AEVKRPGLEPYLGLHYPATDIPQATRFLFMKNKVRMIVDCCAKHVNVLQDKKIPFDLTLC 319
Query: 311 GSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ----EQGRKLWGLVVCHHT 366
GSTLRA H CH +YMENM S ASLVM+V +N+ +++ D+ ++ ++LWGLVVCHHT
Sbjct: 320 GSTLRAAHSCHLQYMENMNSSASLVMAVVVNDNDEDGDSSDAVQPQKSKRLWGLVVCHHT 379
Query: 367 SPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVT 426
+PRFVPFPLRYAC+FL QVF V V+KE+E+ Q+ EK+IL+TQT+LCDML++ P+GIV+
Sbjct: 380 TPRFVPFPLRYACQFLAQVFAVHVSKELEIEYQIIEKNILQTQTLLCDMLVQGEPLGIVS 439
Query: 427 QTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAG 486
Q+PN+MDLVKCDGAAL Y+ K+W LGVTP+E QIK+IA WL E H STG TDSL +AG
Sbjct: 440 QSPNIMDLVKCDGAALLYKNKVWRLGVTPSESQIKEIALWLFECHEDSTGFCTDSLSDAG 499
Query: 487 YPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSF 546
+PGA ALGD CG+AA +I SKD LFWFRSHTA EI+WGGAKH+ G +D GR++HPRSSF
Sbjct: 500 FPGAAALGDIACGMAAARIASKDILFWFRSHTASEIRWGGAKHEPGERDDGRRVHPRSSF 559
Query: 547 KAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDR-----IE 601
KAFLEVVK RSLPW+ E DAIHSLQLILR D E M ++ ++D R IE
Sbjct: 560 KAFLEVVKTRSLPWKTYETDAIHSLQLILR----DAFKETQSMEISTYAIDTRLGDLKIE 615
Query: 602 KIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVA 661
+ EL +T+E+VRLIETA VPILAVD +G +NGWN+K AELTGL VD+AIG L+ LV
Sbjct: 616 GMQELDAVTSEVVRLIETATVPILAVDVNGMINGWNTKIAELTGLPVDEAIGKHLLTLVE 675
Query: 662 GDSVDVVKNMLSSAF 676
SVD VK ML A
Sbjct: 676 DFSVDRVKKMLDMAL 690
>gi|227452665|dbj|BAH57343.1| phytochrome A [Glycine max]
Length = 1130
Score = 848 bits (2191), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/675 (60%), Positives = 512/675 (75%), Gaps = 21/675 (3%)
Query: 19 SKQNARVAAQTSIDAKLAEDFDESDFDYSTSVNISSSTSNVPSS--------TVSAYLQR 70
S+ +AR AQT++DAKL F+ES + S ++ S + S S+YL +
Sbjct: 20 SRLSARRMAQTTLDAKLHATFEESGSSFDYSSSVRMSPAGTVSGDHQPRSDRATSSYLHQ 79
Query: 71 VQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLF 130
Q+ +LIQPFGC++A+DE+ V+ YSENAPEML + HAVP++ AL +G D+RT+F
Sbjct: 80 TQKIKLIQPFGCLLALDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHPALGIGTDIRTIF 139
Query: 131 TSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVT 190
T+ +AA+QKA FG+V+L NPIL+HCKTSGKPFYAI+HR+ ++ID EPV P +VP+T
Sbjct: 140 TAPSSAAIQKALRFGDVSLHNPILVHCKTSGKPFYAIIHRVTGSVIIDFEPVKPHEVPMT 199
Query: 191 AAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVV 250
A+GAL+SYKLAAKAI+RL+SL +GN+ LC+ +V EV +LTGYDRVM YKFHED+HGEV+
Sbjct: 200 ASGALQSYKLAAKAITRLESLTTGNMETLCNTMVREVFELTGYDRVMAYKFHEDDHGEVI 259
Query: 251 AECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLC 310
AE +RP LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V V+QDKK+ L+LC
Sbjct: 260 AEVKRPGLEPYLGLHYPATDIPQATRFLFMKNKVRMIVDCCAKHVNVLQDKKIPFDLTLC 319
Query: 311 GSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ----EQGRKLWGLVVCHHT 366
GSTLRA H CH +YMENM S ASLVM+V +N+ +++ D+ ++ ++LWGLVVCHHT
Sbjct: 320 GSTLRAAHSCHLQYMENMNSSASLVMAVVVNDNDEDGDSSDAVQPQKSKRLWGLVVCHHT 379
Query: 367 SPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVT 426
+PRFVPFPLRYAC+FL QVF V V+KE+E+ Q+ EK+IL+TQT+LCDML++ P+GIV+
Sbjct: 380 TPRFVPFPLRYACQFLAQVFAVHVSKELEIEYQIIEKNILQTQTLLCDMLVQGEPLGIVS 439
Query: 427 QTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAG 486
Q+PN+MDLVKCDGAAL Y+ K+W LGVTP+E QIK+IA WL E H STG TDSL +AG
Sbjct: 440 QSPNIMDLVKCDGAALLYKNKVWRLGVTPSESQIKEIALWLFECHEDSTGFCTDSLSDAG 499
Query: 487 YPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSF 546
+PGA ALGD CG+AA +I SKD LFWFRSHTA EI+WGGAKH+ G +D GR++HPRSSF
Sbjct: 500 FPGAAALGDIACGMAAARIASKDILFWFRSHTASEIRWGGAKHEPGERDDGRRVHPRSSF 559
Query: 547 KAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDR-----IE 601
KAFLEVVK RSLPW+ E DAIHSLQLILR D E M ++ ++D R IE
Sbjct: 560 KAFLEVVKTRSLPWKTYETDAIHSLQLILR----DAFKETQSMEISTYAIDTRLGDLKIE 615
Query: 602 KIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVA 661
+ EL +T+E+VRLIETA VPILAVD +G +NGWN+K AELTGL VD+AIG L+ LV
Sbjct: 616 GMQELDAVTSEVVRLIETATVPILAVDVNGMINGWNTKIAELTGLPVDEAIGKHLLTLVE 675
Query: 662 GDSVDVVKNMLSSAF 676
SVD VK ML A
Sbjct: 676 DFSVDRVKKMLDMAL 690
>gi|363547899|gb|AEW26989.1| phytochrome P [Abies firma]
Length = 590
Score = 848 bits (2191), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/601 (67%), Positives = 492/601 (81%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
+QPFGC++AV+E F ++ YSENA EMLDLAP +VP++EQ+ LT+G DVRTLFT++ A
Sbjct: 2 VQPFGCVLAVEETTFRIIAYSENALEMLDLAPQSVPSMEQE-VLTIGTDVRTLFTAASAN 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +HCK S KPFYAI+HRIDVG+VID EP+ D ++AAGA++
Sbjct: 61 SLEKAAVAHEISLMNPIWVHCKNSRKPFYAIVHRIDVGMVIDFEPLG--DAFMSAAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLPSG+I LLCD +V V +LTGYDRVMVYKFHEDEHG RR
Sbjct: 119 SQKLAVRAISRLQSLPSGDIGLLCDTVVENVRELTGYDRVMVYKFHEDEHGGSCRGIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
+LEPYLG HYPATDIPQASRFL M+N+VRMICDC+A PVKVIQ ++L QPL L GSTLRA
Sbjct: 179 NLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCMATPVKVIQSEELMQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMGNMGSIASLVMAVIIN-----------GNLKLWGLVVCHHTSPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAAL+Y G W+LGVTPTE QIKDIA+WLLE+H STGLSTDSL +AGYP A +LGDA
Sbjct: 348 CDGAALHYGGMCWMLGVTPTEAQIKDIADWLLEHHGDSTGLSTDSLADAGYPSAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+A+ +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMASARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPW++VE+DAIHSLQLILRGS QD +K +V+ D R++ IDEL + +EMVRL
Sbjct: 468 SLPWDNVEIDAIHSLQLILRGSFQDIDDSGTKTMVHSRLNDLRLQGIDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD++G VNGWN+K AELTGL V +A+G +LV DL+ +SV+ V+ ML +A
Sbjct: 528 IETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAMGMSLVQDLLFEESVERVEKMLYNA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|363547539|gb|AEW26813.1| phytochrome P [Cycas dolichophylla]
Length = 589
Score = 848 bits (2190), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/601 (67%), Positives = 487/601 (81%), Gaps = 16/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEMSLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSVRAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV +LV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHNLVYEESVETVERLLYHA 586
Query: 676 F 676
Sbjct: 587 L 587
>gi|363547529|gb|AEW26808.1| phytochrome P [Cycas collina]
Length = 589
Score = 848 bits (2190), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/601 (67%), Positives = 486/601 (80%), Gaps = 16/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + + SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRCSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSVRAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGATSLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV +LV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHNLVYEESVETVERLLYHA 586
Query: 676 F 676
Sbjct: 587 L 587
>gi|363547886|gb|AEW26983.1| phytochrome P [Zamia skinneri]
Length = 590
Score = 848 bits (2190), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/601 (67%), Positives = 489/601 (81%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQP GCM+AV+E+ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT + A
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERE-LLTIGTDVRTLFTPASAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NP+ +H K+SGKPFYAILHRIDVG+VID EPV ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPVWMHSKSSGKPFYAILHRIDVGMVIDFEPVG--GAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGS+ASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMN-----------VNMKLWGLVVCHHTSPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EK+IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKNILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTPTE QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD +K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSKTKTMIHSRLTDLRLQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|363547858|gb|AEW26969.1| phytochrome P [Zamia lecointei]
Length = 590
Score = 848 bits (2190), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/601 (67%), Positives = 487/601 (81%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQP GCM+AV+E F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT + A
Sbjct: 2 IQPLGCMLAVEEHTFRIIAYSENAVGMLDLAPQSVPTMERE-LLTIGTDVRTLFTPASAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NP+ +H ++SGKPFYAILHRIDVG+VID EPV ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPVWMHSESSGKPFYAILHRIDVGMVIDFEPVG--GAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGS+ASLVM+ +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSVASLVMAAVMN-----------VNMKLWGLVVCHHTSPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTPTE QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD +K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSKTKTMIHSRLTDLRLQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|363547569|gb|AEW26827.1| phytochrome P [Cycas revoluta]
Length = 589
Score = 848 bits (2190), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/601 (67%), Positives = 487/601 (81%), Gaps = 16/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSVRAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPR+SFKAFLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRTSFKAFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV +LV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHNLVYEESVETVERLLYHA 586
Query: 676 F 676
Sbjct: 587 L 587
>gi|363547556|gb|AEW26821.1| phytochrome P [Cycas litoralis]
Length = 589
Score = 848 bits (2190), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/601 (67%), Positives = 486/601 (80%), Gaps = 16/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q++ E++L+AQ+ EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLSMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFK FLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKVFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 F 676
Sbjct: 587 L 587
>gi|363547560|gb|AEW26823.1| phytochrome P [Cycas macrocarpa]
Length = 589
Score = 847 bits (2189), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/601 (67%), Positives = 486/601 (80%), Gaps = 16/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKF EDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFREDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 F 676
Sbjct: 587 L 587
>gi|363547679|gb|AEW26882.1| phytochrome P [Encephalartos caffer]
Length = 590
Score = 847 bits (2189), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/601 (68%), Positives = 485/601 (80%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D + AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAATSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE R
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIGRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLV +V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMANMGSIASLVTAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R+ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVRSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|363547830|gb|AEW26955.1| phytochrome P [Zamia angustifolia]
Length = 590
Score = 847 bits (2189), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/601 (67%), Positives = 489/601 (81%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQP GCM+AV+E+ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT + A
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERE-LLTIGTDVRTLFTPASAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NP+ +H K+SGKPFYAILHRIDVG+VID EPV V ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPVWMHSKSSGKPFYAILHRIDVGMVIDFEPVG--GVAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELTQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGS+ASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMN-----------VNMKLWGLVVCHHTSPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLVAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVT TE QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWMLGVTLTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDTETKTMIHSRLTDLRLQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|363547595|gb|AEW26840.1| phytochrome P [Cycas seemannii]
Length = 589
Score = 847 bits (2188), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/601 (67%), Positives = 485/601 (80%), Gaps = 16/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVK+IQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKIIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFK FLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKVFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G + V DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSFVHDLVYEESVETVERLLYHA 586
Query: 676 F 676
Sbjct: 587 L 587
>gi|363547517|gb|AEW26802.1| phytochrome P [Cycas calcicola]
Length = 589
Score = 847 bits (2188), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/601 (67%), Positives = 485/601 (80%), Gaps = 16/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPFGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFK FLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKVFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTLIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKMAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 F 676
Sbjct: 587 L 587
>gi|363547870|gb|AEW26975.1| phytochrome P [Zamia paucijuga]
Length = 590
Score = 847 bits (2188), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/601 (67%), Positives = 488/601 (81%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQP GCM+AV+E+ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT + A
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERE-LLTIGTDVRTLFTPASAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NP+ +H K+SGKPFYAILHRIDVG+VID EPV ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPVWMHSKSSGKPFYAILHRIDVGMVIDFEPVG--GAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYP TDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPTTDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGS+ASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMN-----------VNMKLWGLVVCHHTSPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTPTE QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLTDLRLQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAV++ G VNGWN+K AELTGL V +A+G LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVNSGGFVNGWNAKLAELTGLPVGEAMGKPLVCDLIYEESMETVERLLHHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|363547734|gb|AEW26909.1| phytochrome P [Encephalartos munchii]
Length = 590
Score = 847 bits (2188), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/601 (67%), Positives = 486/601 (80%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
+QPFGCM+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A
Sbjct: 2 VQPFGCMLAVEERTYRIISYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D + AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAATSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM +MGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMASMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYP A +LGDA
Sbjct: 348 CDGAALYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRS TAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSQTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|363547623|gb|AEW26854.1| phytochrome P [Cycas yorkiana]
Length = 589
Score = 847 bits (2188), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/601 (67%), Positives = 485/601 (80%), Gaps = 16/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 VHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPFGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFK FLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKVFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 F 676
Sbjct: 587 L 587
>gi|363547759|gb|AEW26921.1| phytochrome P [Encephalartos transvenosus]
Length = 590
Score = 847 bits (2188), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/601 (67%), Positives = 485/601 (80%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+A +E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAAEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D + AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAAASVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM +MGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMASMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N EV+L+AQL EK L+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMEVQLAAQLTEKRTLKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYP A +LGDA
Sbjct: 348 CDGAALYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|363547591|gb|AEW26838.1| phytochrome P [Cycas rumphii]
Length = 589
Score = 847 bits (2188), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/601 (67%), Positives = 486/601 (80%), Gaps = 16/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPRGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIP+ASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPRASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFK FLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKVFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 F 676
Sbjct: 587 L 587
>gi|227452669|dbj|BAH57345.1| phytochrome A [Glycine max]
Length = 1094
Score = 847 bits (2188), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/675 (60%), Positives = 512/675 (75%), Gaps = 21/675 (3%)
Query: 19 SKQNARVAAQTSIDAKLAEDFDESDFDYSTSVNISSSTSNVPSS--------TVSAYLQR 70
S+ +AR AQT++DAKL F+ES + S ++ S + S S+YL +
Sbjct: 20 SRLSARRMAQTTLDAKLHATFEESGSSFDYSSSVRMSPAGTVSGDHQPRSDRATSSYLHQ 79
Query: 71 VQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLF 130
Q+ +LIQPFGC++A+DE+ V+ YSENAPEML + HAVP++ AL +G D+RT+F
Sbjct: 80 TQKIKLIQPFGCLLALDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHPALGIGTDIRTIF 139
Query: 131 TSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVT 190
T+ +AA+QKA FG+V+L NPIL+HCKTSGKPFYAI+HR+ ++ID EPV P +VP+T
Sbjct: 140 TAPSSAAIQKALRFGDVSLHNPILVHCKTSGKPFYAIIHRVTGSVIIDFEPVKPHEVPMT 199
Query: 191 AAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVV 250
A+GAL+SYKLAAKAI+RL+SL +GN+ LC+ +V EV +LTGYDRVM YKFHED+HGEV+
Sbjct: 200 ASGALQSYKLAAKAITRLESLTTGNMETLCNTMVREVFELTGYDRVMAYKFHEDDHGEVI 259
Query: 251 AECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLC 310
AE +RP LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V V+QDKK+ L+LC
Sbjct: 260 AEVKRPGLEPYLGLHYPATDIPQATRFLFMKNKVRMIVDCCAKHVNVLQDKKIPFDLTLC 319
Query: 311 GSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ----EQGRKLWGLVVCHHT 366
GSTLRA H CH +YMENM S ASLVM+V +N+ +++ D+ ++ ++LWGLVVCHHT
Sbjct: 320 GSTLRAAHSCHLQYMENMNSSASLVMAVVVNDNDEDGDSSDAVQPQKSKRLWGLVVCHHT 379
Query: 367 SPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVT 426
+PRFVPFPLRYAC+FL QVF V V+KE+E+ Q+ EK+IL+TQT+LCDML++ P+GIV+
Sbjct: 380 TPRFVPFPLRYACQFLAQVFAVHVSKELEIEYQIIEKNILQTQTLLCDMLVQGEPLGIVS 439
Query: 427 QTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAG 486
Q+PN+MDLVKCDGAAL Y+ K+W LGVTP+E QIK+IA WL E H STG TDSL +AG
Sbjct: 440 QSPNIMDLVKCDGAALLYKNKVWRLGVTPSESQIKEIALWLFECHEDSTGFCTDSLSDAG 499
Query: 487 YPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSF 546
+PGA ALGD CG+AA +I SKD LFWFRSHTA EI+WGGAKH+ G +D GR++HPRSSF
Sbjct: 500 FPGAAALGDIACGMAAARIASKDILFWFRSHTASEIRWGGAKHEPGERDDGRRVHPRSSF 559
Query: 547 KAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDR-----IE 601
KAFLEVVK RSLPW+ E DAIHSLQLILR D E M ++ ++D R IE
Sbjct: 560 KAFLEVVKTRSLPWKTYETDAIHSLQLILR----DAFKETQSMEISTYAIDTRLGDLKIE 615
Query: 602 KIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVA 661
+ EL +T+E+VRLIETA VPILAVD +G +NGWN+K AELTGL VD+AIG L+ LV
Sbjct: 616 GMQELDAVTSEVVRLIETATVPILAVDVNGMINGWNTKIAELTGLPVDEAIGKHLLTLVE 675
Query: 662 GDSVDVVKNMLSSAF 676
SVD VK ML A
Sbjct: 676 DFSVDRVKKMLDMAL 690
>gi|363547752|gb|AEW26918.1| phytochrome P [Encephalartos sclavoi]
Length = 590
Score = 847 bits (2188), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/601 (68%), Positives = 486/601 (80%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D + AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAATSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM +MGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMASMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRVVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P+VMDLVK
Sbjct: 288 YACEFLMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSVMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAAL Y G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYP A +LGDA
Sbjct: 348 CDGAALCYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|363547537|gb|AEW26812.1| phytochrome P [Cycas diannanensis]
Length = 589
Score = 847 bits (2188), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/601 (67%), Positives = 486/601 (80%), Gaps = 16/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+V+D EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVVDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG YPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLRYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSVRAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVKQR
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKQR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV +LV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHNLVYEESVETVERLLYHA 586
Query: 676 F 676
Sbjct: 587 L 587
>gi|57791646|gb|AAW56591.1| phytochrome B [Arabidopsis lyrata]
Length = 1160
Score = 847 bits (2188), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/694 (60%), Positives = 517/694 (74%), Gaps = 19/694 (2%)
Query: 2 SSKSTN------KTNYSRSSSARSKQN-ARVAAQTSIDAKLAEDFDES-----DFDYSTS 49
SS +TN + S + S R +++ ++ Q ++DA+L F++S FDYS S
Sbjct: 15 SSHTTNNRRGGEQAQSSGTKSLRPRESMSKAIQQYTVDARLHAVFEQSGESGKSFDYSQS 74
Query: 50 VNISSSTSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPH 109
+ ++ S+VP ++AYL R+QRG IQPFGCMIAVDE +F ++GYSENA EML L P
Sbjct: 75 LKTTTYGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGLMPQ 134
Query: 110 AVPNIEQQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILH 169
+VP +E+ + L +G DVR+LFTSS + L++A E+ LLNP+ IH K +GKPFYAILH
Sbjct: 135 SVPTLEKPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGKPFYAILH 194
Query: 170 RIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSD 229
RIDVG+VIDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V V D
Sbjct: 195 RIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRD 254
Query: 230 LTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICD 289
LTGYDRVMVYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI D
Sbjct: 255 LTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVD 314
Query: 290 CLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN 349
C A PV V+QD +L Q + L GSTLRAPHGCH++YM NMGSIASL M+V IN E++ N
Sbjct: 315 CNAKPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEEDGSN 374
Query: 350 --DQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILR 407
+LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK +LR
Sbjct: 375 VASGRSSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLR 434
Query: 408 TQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWL 467
TQT+LCDMLLRDSP GIVTQ+P++MDLVKCDGAA Y GK + LGV P+E QIKD+ EWL
Sbjct: 435 TQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVVEWL 494
Query: 468 LEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGA 527
L H STGLSTDSL +AGYP A ALGDAVCG+A IT +DFLFWFRSHTAKEIKWGGA
Sbjct: 495 LANHADSTGLSTDSLGDAGYPDAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGA 554
Query: 528 KHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAED 586
KH KD G++MHPR SF+AFLEVVK RS PWE EMDAIHSLQLILR S ++ E A +
Sbjct: 555 KHHPEDKDDGQRMHPRLSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAAMN 614
Query: 587 SKMIVNV--PSVDDRIEK-IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAEL 643
SK + P D E+ IDEL + EMVRLIETA VPI AVDA G +NGWN+K AEL
Sbjct: 615 SKAVDGAVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAEL 674
Query: 644 TGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
TGL+V++A+G +LV DL+ ++ + V +LS A
Sbjct: 675 TGLSVEEAMGKSLVSDLIYKENEETVNKLLSRAL 708
>gi|297836762|ref|XP_002886263.1| phytochrome B [Arabidopsis lyrata subsp. lyrata]
gi|297332103|gb|EFH62522.1| phytochrome B [Arabidopsis lyrata subsp. lyrata]
Length = 1163
Score = 847 bits (2187), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/694 (60%), Positives = 517/694 (74%), Gaps = 19/694 (2%)
Query: 2 SSKSTN------KTNYSRSSSARSKQN-ARVAAQTSIDAKLAEDFDES-----DFDYSTS 49
SS +TN + S + S R +++ ++ Q ++DA+L F++S FDYS S
Sbjct: 18 SSHTTNNRRGGEQAQSSGTKSLRPRESMSKAIQQYTVDARLHAVFEQSGESGKSFDYSQS 77
Query: 50 VNISSSTSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPH 109
+ ++ S+VP ++AYL R+QRG IQPFGCMIAVDE +F ++GYSENA EML L P
Sbjct: 78 LKTTTYGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGLMPQ 137
Query: 110 AVPNIEQQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILH 169
+VP +E+ + L +G DVR+LFTSS + L++A E+ LLNP+ IH K +GKPFYAILH
Sbjct: 138 SVPTLEKPEILAMGTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGKPFYAILH 197
Query: 170 RIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSD 229
RIDVG+VIDLEP +D ++ AGA++S KLA +AIS+LQSLP G+I LLCD +V V D
Sbjct: 198 RIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRD 257
Query: 230 LTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICD 289
LTGYDRVMVYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI D
Sbjct: 258 LTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVD 317
Query: 290 CLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN 349
C A PV V+QD +L Q + L GSTLRAPHGCH++YM NMGSIASL M+V IN E++ N
Sbjct: 318 CNAKPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEEDGSN 377
Query: 350 --DQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILR 407
+LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK +LR
Sbjct: 378 VASGRSSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLR 437
Query: 408 TQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWL 467
TQT+LCDMLLRDSP GIVTQ+P++MDLVKCDGAA Y GK + LGV P+E QIKD+ EWL
Sbjct: 438 TQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVVEWL 497
Query: 468 LEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGA 527
L H STGLSTDSL +AGYP A ALGDAVCG+A IT +DFLFWFRSHTAKEIKWGGA
Sbjct: 498 LANHADSTGLSTDSLGDAGYPDAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGA 557
Query: 528 KHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAED 586
KH KD G++MHPR SF+AFLEVVK RS PWE EMDAIHSLQLILR S ++ E A +
Sbjct: 558 KHHPEDKDDGQRMHPRLSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAAMN 617
Query: 587 SKMIVNV--PSVDDRIEK-IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAEL 643
SK + P D E+ IDEL + EMVRLIETA VPI AVDA G +NGWN+K AEL
Sbjct: 618 SKAVDGAVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAEL 677
Query: 644 TGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
TGL+V++A+G +LV DL+ ++ + V +LS A
Sbjct: 678 TGLSVEEAMGKSLVSDLIYKENEETVNKLLSRAL 711
>gi|363547593|gb|AEW26839.1| phytochrome P [Cycas schumanniana]
Length = 589
Score = 847 bits (2187), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/601 (67%), Positives = 484/601 (80%), Gaps = 16/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F + YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKTIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPFGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFK FLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKVFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 F 676
Sbjct: 587 L 587
>gi|363547838|gb|AEW26959.1| phytochrome P [Zamia fairchildiana]
Length = 590
Score = 847 bits (2187), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/601 (66%), Positives = 489/601 (81%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQP GCM+AV+E+ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT + A
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERE-LLTIGTDVRTLFTPASAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NP+ +H K+SGKPFYAILHRIDVG+VID EPV ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPVWMHSKSSGKPFYAILHRIDVGMVIDFEPVG--GAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGS+ASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMN-----------VNMKLWGLVVCHHTSPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LG+TPTE QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWMLGMTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTA EIKWGGAKH + KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTANEIKWGGAKHHTDDKDEGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLTDLRLQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV D + +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDPIYEESMETVERLLHHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|255642594|gb|ACU21557.1| phytochrome B [Medicago sativa]
Length = 1141
Score = 847 bits (2187), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/683 (59%), Positives = 514/683 (75%), Gaps = 13/683 (1%)
Query: 5 STNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSNVPSS 62
+T K ++++ +K + AQ DA+L F++S FDYS S+ ++ T++VP
Sbjct: 26 TTTKETEQQNNNVNNKSMKKAIAQYIEDARLHAVFEQSGDSFDYSQSIRLT--TASVPEQ 83
Query: 63 TVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD---- 118
++AYL ++QRG IQPFG MIAVDE +F VL YSENA +ML + P +VP++E D
Sbjct: 84 QITAYLAKIQRGGFIQPFGSMIAVDEPSFRVLAYSENARDMLGITPQSVPSLEDDDESSS 143
Query: 119 -ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVI 177
+G DVR+LFT S L+KA + E++L+NPI IH +++GKPFY ILHRIDVG+VI
Sbjct: 144 SGFNIGTDVRSLFTHSSGVLLEKAFSAREISLMNPIWIHSRSTGKPFYGILHRIDVGVVI 203
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEP +D ++ AGA++S KLA +AIS+LQSLP G++ +LCD +V V +LTGYDRVM
Sbjct: 204 DLEPARSEDPALSIAGAVQSQKLAVRAISQLQSLPGGDVKVLCDAVVESVRELTGYDRVM 263
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+V
Sbjct: 264 VYKFHEDEHGEVVAESKRIDLEPYMGLHYPATDIPQASRFLFKQNRVRMIVDCNASPVRV 323
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-- 355
QD+ L QP+ L GSTLRAPHGCHA+YM NMGSIASL M+V IN +++ GR
Sbjct: 324 FQDEALVQPVCLVGSTLRAPHGCHAQYMANMGSIASLAMAVIINGNDEDGVGIGGTGRNS 383
Query: 356 -KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCD 414
+LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L+AQ EK +LRTQT+LCD
Sbjct: 384 MRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLAAQSLEKRVLRTQTLLCD 443
Query: 415 MLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGS 474
MLLRDSP GIVTQ+P++MDLVKCDGAAL+Y+G + LGVTPTE QI+DI EWLL +H S
Sbjct: 444 MLLRDSPTGIVTQSPSIMDLVKCDGAALFYQGNYYPLGVTPTESQIRDIIEWLLAFHGDS 503
Query: 475 TGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGK 534
TGLSTDSL +AGYPGA +LGDAVCG+A IT KDFLFWFRSHTAKEIKWGGAKH K
Sbjct: 504 TGLSTDSLADAGYPGAASLGDAVCGMAVAYITEKDFLFWFRSHTAKEIKWGGAKHHPEDK 563
Query: 535 DGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVP 594
D G++MHPRSSFKAFLEVVK RS+ W++ EMDAIHSLQLILR S ++ DSK +V+
Sbjct: 564 DDGQRMHPRSSFKAFLEVVKSRSMQWDNAEMDAIHSLQLILRDSFKEAENNDSKAVVHTH 623
Query: 595 SVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGT 654
+ ++ +DEL + EMVRLIETA PI AVD +G +NGWN+K +ELTGL V+ A+G
Sbjct: 624 MAELELQGVDELSSVAREMVRLIETATAPIFAVDVNGRINGWNAKVSELTGLLVEDAMGK 683
Query: 655 ALV-DLVAGDSVDVVKNMLSSAF 676
+L+ DLV +S + V +LS A
Sbjct: 684 SLLHDLVYKESQETVDKLLSHAL 706
>gi|38037178|gb|AAR08425.1| phytochrome A [Cuscuta pentagona]
Length = 1119
Score = 847 bits (2187), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/668 (61%), Positives = 519/668 (77%), Gaps = 16/668 (2%)
Query: 20 KQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISS--STSNVPSS--TVSAYLQRVQR 73
K +AR+ AQTSIDAKL +F+ES FDYS+S+ ++S + P S +AYL ++Q+
Sbjct: 17 KHSARIIAQTSIDAKLHAEFEESGDSFDYSSSIRVTSVNTGEQKPRSDKVTTAYLHQIQK 76
Query: 74 GRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSS 133
+ IQPFGC++A+DE+ F V+ +SENAP+ML + HAVP++ L +G D+RT+FT+
Sbjct: 77 AKFIQPFGCLLALDEKTFRVIAFSENAPDMLTMVSHAVPSVGDLPVLGIGTDIRTIFTAP 136
Query: 134 GAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAG 193
AALQKA FGEV+LLNPIL+HCKTSGKPFYAI+HR+ L++D EPV P + P+TAAG
Sbjct: 137 SGAALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIVDFEPVKPYEAPMTAAG 196
Query: 194 ALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAEC 253
AL+SYKLAAKAI+RLQSLPSG++ CD +V EV +LTGYDRVM YKFH+D+HGEVV+E
Sbjct: 197 ALQSYKLAAKAIARLQSLPSGSLERFCDTIVQEVFELTGYDRVMAYKFHDDDHGEVVSEI 256
Query: 254 RRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGST 313
+P LEPYLG HYPATDIPQA+RFL MKNKVRMICDC A VKV+QD+KL L+LCGST
Sbjct: 257 TKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCQAKHVKVVQDEKLLFDLTLCGST 316
Query: 314 LRAPHGCHARYMENMGSIASLVMSVTIN---EAEDELDNDQEQGRKLWGLVVCHHTSPRF 370
LRAPH CH +YMENM SIASLVM++ +N + E+E + + ++LWGLVVCH+T+PRF
Sbjct: 317 LRAPHTCHLQYMENMNSIASLVMAIVVNDGDDEEEEERSGSGKRKRLWGLVVCHNTTPRF 376
Query: 371 VPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIV--TQT 428
VPFPLRYACEFL QVF + VNKE+EL Q+ EK+ILRTQT+LCD+LLRD+ +GIV +Q+
Sbjct: 377 VPFPLRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLCDILLRDAVLGIVSQSQS 436
Query: 429 PNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYP 488
PN+MDLVKCDGA L Y+ K+ LG+TPT+ Q++DI L E+H STGLSTDSL +AG+P
Sbjct: 437 PNMMDLVKCDGAVLLYKSKIHRLGITPTDFQLQDIVYRLNEHHMDSTGLSTDSLYDAGFP 496
Query: 489 GALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKA 548
GAL+LG +CG+A+V+I+ KD+LFWFRSHTA E++WGG KH+ D GRKMHPRSSFKA
Sbjct: 497 GALSLG--LCGMASVRISEKDWLFWFRSHTASEVRWGGVKHEP---DDGRKMHPRSSFKA 551
Query: 549 FLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRI 608
FLEVV+ RSLPW+D EMD IHSLQLI+R + +E + +++ D RI+ + EL
Sbjct: 552 FLEVVETRSLPWKDYEMDGIHSLQLIMRNAFFNEADTVATNVIHAKLNDLRIDGLQELEA 611
Query: 609 ITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVV 668
+T+EMVRLIETA VPI+AV G VNGWN+K AELTGL+VD+AIG L+ LV SV V
Sbjct: 612 VTSEMVRLIETAMVPIIAVGVDGLVNGWNTKIAELTGLSVDEAIGNHLLTLVEDSSVHTV 671
Query: 669 KNMLSSAF 676
K ML+ A
Sbjct: 672 KKMLNLAL 679
>gi|363547860|gb|AEW26970.1| phytochrome P [Zamia loddigesii]
Length = 590
Score = 847 bits (2187), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/601 (66%), Positives = 488/601 (81%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQP GCM+AV+E+ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT + A
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERE-LLTIGTDVRTLFTPASAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NP+ + K+SGKPFYAILHRIDVG+VID EPV ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPVWMQSKSSGKPFYAILHRIDVGMVIDFEPVG--GAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ++P G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQAMPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYP TDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPTTDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGS+ASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMN-----------VNMKLWGLVVCHHTSPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTPTE QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD D+K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSDTKTMIHSRLTDLRLQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAV++ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVNSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|363547583|gb|AEW26834.1| phytochrome P [Cycas petraea]
Length = 589
Score = 846 bits (2186), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/601 (67%), Positives = 485/601 (80%), Gaps = 16/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVR LFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRALFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPW +VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWGNVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 F 676
Sbjct: 587 L 587
>gi|406685433|gb|AFS51157.1| phytochrome P, partial [Agathis borneensis]
Length = 655
Score = 846 bits (2186), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/628 (66%), Positives = 497/628 (79%), Gaps = 19/628 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDAL----- 120
AYL R+QRG IQPFGCM+AV+E F ++ YSENA EMLDL P +VPN+++ +A+
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFRIIAYSENALEMLDLMPQSVPNMDRDEAMGSHGG 60
Query: 121 ----TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
T+G DVR LFT A AL+KAA E++L+NPI +H + + KPFYAI+HRIDVG+V
Sbjct: 61 RRVITIGTDVRALFTPESARALEKAAMAQEISLMNPIGVHSQNTNKPFYAIVHRIDVGMV 120
Query: 177 IDLEPVNPDDVPVTAAG-----ALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLT 231
IDLEPV AG +++S KLA +AISRLQS +G+I +LCD +V +V +LT
Sbjct: 121 IDLEPVRTGSGGGGVAGLAAAGSVQSQKLAVRAISRLQS--AGDIGVLCDTVVEDVRELT 178
Query: 232 GYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCL 291
GYDRVMVYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC
Sbjct: 179 GYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCR 238
Query: 292 APPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ 351
A PVKVIQ ++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN EDE +
Sbjct: 239 AAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEGGGNG 298
Query: 352 EQGR--KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQ 409
KLWGLVVCHHTSPR VPFPLRYACEFL+Q FG+Q+N E++++AQL EKHILRTQ
Sbjct: 299 SGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQVAAQLTEKHILRTQ 358
Query: 410 TVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLE 469
T+LCDMLLRD+P+GIVT +P++MDLVKCDGAALYY G W+LGVTPTE QIKDIA+WLLE
Sbjct: 359 TLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLLE 418
Query: 470 YHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKH 529
YH STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 419 YHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKH 478
Query: 530 DSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKM 589
KD R+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD ++K
Sbjct: 479 HPDDKDDSRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSNTKT 538
Query: 590 IVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVD 649
+V+ D +++ IDEL + +EMVRLIETA PILAVD++G +NGWN+K AELTGL V
Sbjct: 539 MVHGRLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAELTGLPVG 598
Query: 650 QAIGTALV-DLVAGDSVDVVKNMLSSAF 676
+A+G +LV DL+ +S D V ML A
Sbjct: 599 EAMGKSLVQDLIFHESADTVDKMLCHAL 626
>gi|363547663|gb|AEW26874.1| phytochrome P [Dioon spinulosum]
Length = 590
Score = 846 bits (2186), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/601 (67%), Positives = 486/601 (80%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA MLDLAP +VP +EQ+ LT+G DVRTLFT + A
Sbjct: 2 IQPFGCMLAVEEGTFRIIAYSENAVGMLDLAPQSVPTMEQE-FLTIGTDVRTLFTPASAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H K+SGK FYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHGKSSGKAFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+V+Q +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVVQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NM SIASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMRSIASLVMAVVVN-----------GNMKLWGLVVCHHTSPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W LGVTP E QIKDIA+WLLE H TGLSTDSL EAGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWALGVTPPEAQIKDIADWLLECHADWTGLSTDSLAEAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA KIT+KDFLFWFRSHTAKEIKWGGAKH +D GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAAKITAKDFLFWFRSHTAKEIKWGGAKHHPDDRDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL I +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGMDELSSIASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLCHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|363547665|gb|AEW26875.1| phytochrome P [Dioon tomasellii]
Length = 590
Score = 846 bits (2186), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/601 (67%), Positives = 487/601 (81%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT + A
Sbjct: 2 IQPFGCMLAVEEGTFRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPASAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H K+SGK FYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHGKSSGKAFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+V+Q +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVVQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVVN-----------GNMKLWGLVVCHHTSPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N +++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMDLQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W LGVTP E QIKDIA+WLLE H TGLSTDSL EAGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWALGVTPPEAQIKDIADWLLECHADWTGLSTDSLAEAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA KIT+KDFLFWFRSHTAKEIKWGGAKH +D GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAAKITAKDFLFWFRSHTAKEIKWGGAKHHPDDRDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL I +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDTETKTMIHARLNDLRVQGMDELSSIASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLCHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|363547607|gb|AEW26846.1| phytochrome P [Cycas sphaerica]
Length = 589
Score = 846 bits (2186), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/601 (67%), Positives = 486/601 (80%), Gaps = 16/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 VHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKH+LRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHMLRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLGDAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFK FLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKVFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 F 676
Sbjct: 587 L 587
>gi|363547617|gb|AEW26851.1| phytochrome P [Cycas thouarsii]
Length = 589
Score = 846 bits (2186), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/601 (67%), Positives = 485/601 (80%), Gaps = 16/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPLSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFY I+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYVIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFK FLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKVFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 F 676
Sbjct: 587 L 587
>gi|240119393|dbj|BAH79245.1| phytochrome B [Cardamine nipponica]
gi|240119395|dbj|BAH79246.1| phytochrome B [Cardamine nipponica]
gi|240119397|dbj|BAH79247.1| phytochrome B [Cardamine nipponica]
Length = 1184
Score = 846 bits (2185), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/686 (60%), Positives = 509/686 (74%), Gaps = 21/686 (3%)
Query: 12 SRSSSARSKQN---------ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTS 57
S + S R +QN ++ Q ++DA+L F++S FDYS S+ ++ S
Sbjct: 44 SGTKSLRPQQNQPQSHTVSMSKAIQQYTVDARLHAVFEQSGGSGKSFDYSQSLKTTTYGS 103
Query: 58 NVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQ 117
+VP ++AYL R+QRG IQPFGCMIAVDE F ++GYSENA EML L P +VP++E+
Sbjct: 104 SVPEQQITAYLSRIQRGGFIQPFGCMIAVDESTFRIIGYSENAREMLGLMPQSVPSLEKP 163
Query: 118 DALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVI 177
+ L +G DVR+LF S + L++A ++ +LNP+ IH K +GKPFYAILHRIDVG+VI
Sbjct: 164 EILAMGTDVRSLFAPSSSILLERAFVARDITILNPVWIHSKNTGKPFYAILHRIDVGVVI 223
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEP +D ++ AGA++S KLA +AISRLQSLP G+I LLCD +V V DLTGYDRVM
Sbjct: 224 DLEPARTEDPALSIAGAVQSQKLAVRAISRLQSLPGGDIKLLCDTVVESVRDLTGYDRVM 283
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A PV +
Sbjct: 284 VYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVLL 343
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN--DQEQGR 355
+QD +L Q + L GSTLRAPHGCH++YM NMGSIASL M+V IN E++ N
Sbjct: 344 VQDDRLSQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEEDGSNAGGGRNSM 403
Query: 356 KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDM 415
KLWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK +LR QT+LCDM
Sbjct: 404 KLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRMQTLLCDM 463
Query: 416 LLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGST 475
LLRDSP GIVTQ+P++MDLVKCDGAA Y GK + LGV PTE QIKDI +WLL H ST
Sbjct: 464 LLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPTEAQIKDIVDWLLANHADST 523
Query: 476 GLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKD 535
GLSTDSL EAGYPGA ALGDAVCG+A IT +DFLFWFRSHTAKEIKWGGAKH KD
Sbjct: 524 GLSTDSLGEAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKD 583
Query: 536 GGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVNV- 593
G++MHPRSSF+AFLEVVK RS PWE EMDAIHSLQLILR S ++ E A +SK +
Sbjct: 584 DGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAAMNSKAVDGAV 643
Query: 594 -PSVDDRIEK-IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
P D E+ DEL + EMVRLIETA VPI AVDA G +NGWN+K AELTGL+V++A
Sbjct: 644 QPCRDMSGEQGNDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSVEEA 703
Query: 652 IGTALV-DLVAGDSVDVVKNMLSSAF 676
+G +LV DL+ ++ + V +LS A
Sbjct: 704 MGKSLVSDLIYKENEETVNKLLSRAL 729
>gi|363547657|gb|AEW26871.1| phytochrome P [Dioon edule]
Length = 590
Score = 846 bits (2185), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/601 (67%), Positives = 486/601 (80%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT + A
Sbjct: 2 IQPFGCMLAVEEGTFRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPASAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H K+SGK FYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHGKSSGKAFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+V+Q +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVVQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIA+LVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSIATLVMAVVVN-----------GNMKLWGLVVCHHTSPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W LGVTP E QIKDIA WLLE H TGLSTDSL EAGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWALGVTPPEAQIKDIAAWLLECHADWTGLSTDSLAEAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA KIT+KDFLFWFRSHTAKEIKWGGAKH +D GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAAKITAKDFLFWFRSHTAKEIKWGGAKHHPDDRDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL I +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDTETKTMIHARLNDLRVQGMDELSSIASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLCHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|363547691|gb|AEW26888.1| phytochrome P [Encephalartos dyerianus]
Length = 590
Score = 846 bits (2185), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/601 (67%), Positives = 486/601 (80%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSLPGGVIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM +MGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMASMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYP A +LGDA
Sbjct: 348 CDGAALYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGA+H KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAEHRPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 528 IETATAPILAVDCGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|363547850|gb|AEW26965.1| phytochrome P [Zamia katzeriana]
Length = 590
Score = 846 bits (2185), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/601 (66%), Positives = 488/601 (81%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQP GCM+AV+E+ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT + A
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERE-LLTIGTDVRTLFTPASAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NP+ + K+SGKPFYAILHRIDVG+VID EPV ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPVWMQSKSSGKPFYAILHRIDVGMVIDFEPVG--GAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYP TDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPTTDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGS+ASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMN-----------VNMKLWGLVVCHHTSPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTPTE QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLTDLRLQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAV++ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVNSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|406685447|gb|AFS51164.1| phytochrome P, partial [Agathis ovata]
Length = 659
Score = 846 bits (2185), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/632 (65%), Positives = 496/632 (78%), Gaps = 23/632 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDAL----- 120
AYL R+QRG IQPFGCM+AV+E F ++ YS+NA EMLDL P +VPN+++ +A+
Sbjct: 1 AYLSRMQRGGTIQPFGCMLAVEETTFRIIAYSKNALEMLDLMPQSVPNMDRDEAMGSHGG 60
Query: 121 ----TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLV 176
T+G+DVR LFT A AL+KAA E++L+NPI +H + + KPF AI+HRIDVG+V
Sbjct: 61 RRVITIGMDVRALFTPESARALEKAAMAQEISLMNPIGVHSQNTNKPFCAIVHRIDVGMV 120
Query: 177 IDLEPVNPDDVPVTAAG-----ALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLT 231
IDLEPV AG +++S KLA + ISRLQS +G+I +LCD +V +V +LT
Sbjct: 121 IDLEPVRTGSGGGGVAGLAAAGSVQSQKLAVRTISRLQS--AGDIGVLCDTVVEDVRELT 178
Query: 232 GYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCL 291
GYDRVMVYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC
Sbjct: 179 GYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCR 238
Query: 292 APPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ 351
A PVKVIQ ++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ED+
Sbjct: 239 AAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDQGGGSG 298
Query: 352 EQGR------KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHI 405
+ KLWGLVVCHHTSPR VPFPLRYACEFL+Q FG+Q+N E++++AQL EKHI
Sbjct: 299 GRSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQVAAQLTEKHI 358
Query: 406 LRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAE 465
LRTQT+LCDMLLRD+P+GIVT +P++MDLVKCDGAALYY G W+LGVTPTE QIKDIA+
Sbjct: 359 LRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIAD 418
Query: 466 WLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWG 525
WLLEYH STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWG
Sbjct: 419 WLLEYHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWG 478
Query: 526 GAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAE 585
GAKH KD R+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD
Sbjct: 479 GAKHHPDDKDDARRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDS 538
Query: 586 DSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTG 645
++K +V+ D +++ IDEL + +EMVRLIETA PILAVD++G +NGWN+K AELTG
Sbjct: 539 NTKTMVHGRLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAELTG 598
Query: 646 LTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
L V +A+G +LV DL+ +S D V ML A
Sbjct: 599 LPVGEAMGKSLVHDLIFHESADTVDKMLCHAL 630
>gi|39777247|gb|AAR30893.1| phytochrome A [Sorghum bicolor subsp. verticilliflorum]
gi|39777249|gb|AAR30894.1| phytochrome A [Sorghum bicolor subsp. verticilliflorum]
gi|39777257|gb|AAR30898.1| phytochrome A [Sorghum bicolor subsp. x drummondii]
Length = 1131
Score = 846 bits (2185), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/664 (62%), Positives = 501/664 (75%), Gaps = 12/664 (1%)
Query: 25 VAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSNVP---SSTVSAYLQRVQRGRLIQP 79
+ AQT++DA+L +++ES FDYS V ST + S V AYLQ +QRG+LIQP
Sbjct: 24 ILAQTTLDAELNAEYEESGDSFDYSKLVEAQRSTPSEQQGRSGKVIAYLQHIQRGKLIQP 83
Query: 80 FGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQ 139
FGC++A+DE++F V+ +SENAPEML HAVPN++ L +G +VR+LFT GA ALQ
Sbjct: 84 FGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLGIGTNVRSLFTDPGATALQ 143
Query: 140 KAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYK 199
KA F +V+LLNPIL+ CKTSGKPFYAI+HR LV+D EPV P + P TAAGAL+SYK
Sbjct: 144 KALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQSYK 203
Query: 200 LAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLE 259
LAAKAIS++QSLP G++ LC+ +V EV +LTGYDRVM YKFHEDEHGEV AE +P +E
Sbjct: 204 LAAKAISKIQSLPGGSMEALCNTVVKEVFELTGYDRVMAYKFHEDEHGEVFAEITKPGIE 263
Query: 260 PYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHG 319
PYLG HYPATDIPQA+RFL MKNKVRMICDC A VK+I+D+ L +SLCGSTLRAPH
Sbjct: 264 PYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKSVKIIEDEALSIDISLCGSTLRAPHS 323
Query: 320 CHARYMENMGSIASLVMSVTINEAEDE------LDNDQEQGRKLWGLVVCHHTSPRFVPF 373
CH +YMENM SIASLVM+V +NE E++ Q++ ++LWGL+VCHH SPR+VPF
Sbjct: 324 CHLQYMENMNSIASLVMAVVVNENEEDDEPGPEQPPQQQKKKRLWGLIVCHHESPRYVPF 383
Query: 374 PLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD-SPVGIVTQTPNVM 432
PLRYACEFL QVF V VNKE EL Q+REK ILR QT+L DML ++ SP+ IV+ +PN+M
Sbjct: 384 PLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKEASPLSIVSGSPNIM 443
Query: 433 DLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALA 492
DLVKCDGAAL Y K+W L PTE QI+DIA WL E H STGLSTDSL +AGYPGA +
Sbjct: 444 DLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDAGYPGAAS 503
Query: 493 LGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEV 552
LGD +CG+A KITSKD LFWFRSHTA EIKWGGAKHD KD R+MHPR SFKAFLEV
Sbjct: 504 LGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLSFKAFLEV 563
Query: 553 VKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNE 612
VK +SLPW D EMDAIHSLQLILRG+L D + ++ D +++ + EL+ +T+E
Sbjct: 564 VKMKSLPWSDYEMDAIHSLQLILRGTLNDALKPVQASGLDNQIGDLKLDGLAELQAVTSE 623
Query: 613 MVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNML 672
MVRL+ETA VPILAVD +G VNGWN K AEL+GL VD+AIG ++ LV SV +V+ ML
Sbjct: 624 MVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHILTLVEDSSVSIVQRML 683
Query: 673 SSAF 676
A
Sbjct: 684 YLAL 687
>gi|363547523|gb|AEW26805.1| phytochrome P [Cycas chevalieri]
Length = 589
Score = 846 bits (2185), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/601 (67%), Positives = 486/601 (80%), Gaps = 16/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S +LA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQRLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSVRAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGV PTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVAPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV +LV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHNLVYEESVETVERLLYHA 586
Query: 676 F 676
Sbjct: 587 L 587
>gi|363547503|gb|AEW26795.1| phytochrome P [Cycas apoa]
Length = 589
Score = 846 bits (2185), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/601 (67%), Positives = 485/601 (80%), Gaps = 16/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSE+A EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSEDAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPFGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFK FLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKVFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 F 676
Sbjct: 587 L 587
>gi|39777237|gb|AAR30888.1| phytochrome A [Sorghum bicolor]
gi|39777253|gb|AAR30896.1| phytochrome A [Sorghum bicolor subsp. verticilliflorum]
gi|39777255|gb|AAR30897.1| phytochrome A [Sorghum bicolor subsp. verticilliflorum]
Length = 1131
Score = 846 bits (2185), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/664 (62%), Positives = 501/664 (75%), Gaps = 12/664 (1%)
Query: 25 VAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSNVP---SSTVSAYLQRVQRGRLIQP 79
+ AQT++DA+L +++ES FDYS V ST + S V AYLQ +QRG+LIQP
Sbjct: 24 ILAQTTLDAELNAEYEESGDSFDYSKLVEAQRSTPSEQQGRSGKVIAYLQHIQRGKLIQP 83
Query: 80 FGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQ 139
FGC++A+DE++F V+ +SENAPEML HAVPN++ L +G +VR+LFT GA ALQ
Sbjct: 84 FGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLGIGTNVRSLFTDPGATALQ 143
Query: 140 KAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYK 199
KA F +V+LLNPIL+ CKTSGKPFYAI+HR LV+D EPV P + P TAAGAL+SYK
Sbjct: 144 KALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQSYK 203
Query: 200 LAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLE 259
LAAKAIS++QSLP G++ LC+ +V EV +LTGYDRVM YKFHEDEHGEV AE +P +E
Sbjct: 204 LAAKAISKIQSLPGGSMEALCNTVVKEVFELTGYDRVMAYKFHEDEHGEVFAEITKPGIE 263
Query: 260 PYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHG 319
PYLG HYPATDIPQA+RFL MKNKVRMICDC A VK+I+D+ L +SLCGSTLRAPH
Sbjct: 264 PYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKSVKIIEDEALSIDISLCGSTLRAPHS 323
Query: 320 CHARYMENMGSIASLVMSVTINEAEDE------LDNDQEQGRKLWGLVVCHHTSPRFVPF 373
CH +YMENM SIASLVM+V +NE E++ Q++ ++LWGL+VCHH SPR+VPF
Sbjct: 324 CHLQYMENMNSIASLVMAVVVNENEEDDEPGPEQPPQQQKKKRLWGLIVCHHESPRYVPF 383
Query: 374 PLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD-SPVGIVTQTPNVM 432
PLRYACEFL QVF V VNKE EL Q+REK ILR QT+L DML ++ SP+ IV+ +PN+M
Sbjct: 384 PLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKEASPLSIVSGSPNIM 443
Query: 433 DLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALA 492
DLVKCDGAAL Y K+W L PTE QI+DIA WL E H STGLSTDSL +AGYPGA +
Sbjct: 444 DLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDAGYPGAAS 503
Query: 493 LGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEV 552
LGD +CG+A KITSKD LFWFRSHTA EIKWGGAKHD KD R+MHPR SFKAFLEV
Sbjct: 504 LGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLSFKAFLEV 563
Query: 553 VKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNE 612
VK +SLPW D EMDAIHSLQLILRG+L D + ++ D +++ + EL+ +T+E
Sbjct: 564 VKMKSLPWSDYEMDAIHSLQLILRGTLNDALKPVQASGLDNQIGDLKLDGLAELQAVTSE 623
Query: 613 MVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNML 672
MVRL+ETA VPILAVD +G VNGWN K AEL+GL VD+AIG ++ LV SV +V+ ML
Sbjct: 624 MVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHILTLVEDSSVSIVQRML 683
Query: 673 SSAF 676
A
Sbjct: 684 YLAL 687
>gi|363547802|gb|AEW26941.1| phytochrome P [Macrozamia mountperriensis]
Length = 590
Score = 845 bits (2184), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/601 (67%), Positives = 485/601 (80%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ F ++ YSEN MLDLAP +VP +EQ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENPVGMLDLAPQSVPTMEQV-FLTIGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H ++SGKPFYAI+HRIDVG+VID EPV D ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSRSSGKPFYAIVHRIDVGMVIDFEPVG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G+I LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEGVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVGVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+V IN KLWGLVVCHHT PR VPFPLR
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVIN-----------GNMKLWGLVVCHHTCPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWVLGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D +++ +DEL + +EM RL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLKVQSMDELSSVASEMARL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLCHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|371940220|dbj|BAL45547.1| Phytochrome A1 [Glycine max]
Length = 1130
Score = 845 bits (2184), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/671 (60%), Positives = 516/671 (76%), Gaps = 20/671 (2%)
Query: 27 AQTSIDAKLAEDFDESDFDYSTSVNISSSTS----NVPSS--TVSAYLQRVQRGRLIQPF 80
AQ ++DAK+ F+ES + S ++ S + N P S +AYL +QRG++IQPF
Sbjct: 23 AQATVDAKIHATFEESGSSFDYSSSVRVSGTADGVNQPRSDKVTTAYLNHMQRGKMIQPF 82
Query: 81 GCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQK 140
GC++A+DE+ V+ YSENAPEML + HAVP++ AL +G D++TLFT+ + LQK
Sbjct: 83 GCLLAIDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHPALGIGTDIKTLFTAPSVSGLQK 142
Query: 141 AANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKL 200
A +V+LLNPIL+HCKTSGKPFYAI+HR+ L++D EPV P +VP+TAAGAL+SYKL
Sbjct: 143 ALGCADVSLLNPILVHCKTSGKPFYAIVHRVTGSLIVDFEPVKPYEVPMTAAGALQSYKL 202
Query: 201 AAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEP 260
AAKAI+RLQSLPSGN+ LCD +V EV +LTGYDRVM YKFHED+HGEV+AE +P LEP
Sbjct: 203 AAKAITRLQSLPSGNMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVIAEITKPGLEP 262
Query: 261 YLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGC 320
YLG HYPATDIPQASRFL KNKVRMI DC A V+V+QD+KL L LCGSTLRAPH C
Sbjct: 263 YLGLHYPATDIPQASRFLFRKNKVRMIVDCHAKHVRVLQDEKLQFDLILCGSTLRAPHSC 322
Query: 321 HARYMENMGSIASLVMSVTINEAEDELDND--QEQGR-KLWGLVVCHHTSPRFVPFPLRY 377
HA+YM NM SIASLV++V +N+ E++ D D Q Q R +LWGLVVCH+T+PRFVPFPLRY
Sbjct: 323 HAQYMANMDSIASLVLAVVVNDNEEDGDTDAVQPQKRERLWGLVVCHNTTPRFVPFPLRY 382
Query: 378 ACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKC 437
ACEFL QVF V V+KE+EL Q+ EK+ILRTQ +LC ML+RD+P+GIV+++PN+MDLVKC
Sbjct: 383 ACEFLAQVFAVHVHKEIELEYQIIEKNILRTQALLC-MLMRDAPLGIVSESPNIMDLVKC 441
Query: 438 DGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAV 497
DGAAL YR K+W LGVTP+E QI++IA WL EYH STG STDSL +AG+P AL+LGD V
Sbjct: 442 DGAALIYRNKVWRLGVTPSEPQIREIALWLSEYHMDSTGFSTDSLFDAGFPSALSLGDVV 501
Query: 498 CGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRS 557
CG+A+V++T+K +FWFRSHTA EI+WGGAKH++G KD R+MHPRSSFKAFLEVVK RS
Sbjct: 502 CGMASVRVTAKGMVFWFRSHTAAEIRWGGAKHEAGEKDDSRRMHPRSSFKAFLEVVKARS 561
Query: 558 LPWEDVEMDAIHSLQLILRGSLQDEVAE---DSKMI------VNVPSVDD-RIEKIDELR 607
LPW++ EMDAIHSLQ+ILR + +++ ++K I + + ++D +IE++ EL
Sbjct: 562 LPWKEYEMDAIHSLQIILRNAFKEDTESLDLNAKAINTRLSDLKIEGINDLKIERMQELE 621
Query: 608 IITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDV 667
+T+E+VRLI+TA VPILAVD G VNGWN K AELTGL + +A G L+ LV S D
Sbjct: 622 AVTSEIVRLIDTATVPILAVDVDGLVNGWNIKIAELTGLPIGEATGKHLLTLVEDSSTDR 681
Query: 668 VKNMLSSAFLA 678
VK ML+ A L
Sbjct: 682 VKKMLNLALLG 692
>gi|240119401|dbj|BAH79249.1| phytochrome B [Cardamine nipponica]
Length = 1184
Score = 845 bits (2184), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/686 (60%), Positives = 509/686 (74%), Gaps = 21/686 (3%)
Query: 12 SRSSSARSKQN---------ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTS 57
S + S R +QN ++ Q ++DA+L F++S FDYS S+ ++ S
Sbjct: 44 SGTKSLRPQQNQPQSHTVSMSKAIQQYTVDARLHAVFEQSGGSGKSFDYSQSLKTTTYGS 103
Query: 58 NVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQ 117
+VP ++AYL R+QRG IQPFGCMIAVDE F ++GYSENA EML L P +VP++E+
Sbjct: 104 SVPEQQITAYLSRIQRGGFIQPFGCMIAVDESTFRIIGYSENAREMLGLMPQSVPSLEKP 163
Query: 118 DALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVI 177
+ L +G DVR+LF S + L++A ++ +LNP+ IH K +GKPFYAILHRIDVG+VI
Sbjct: 164 EILAMGTDVRSLFAPSSSILLERAFVARDITILNPVWIHSKNTGKPFYAILHRIDVGVVI 223
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEP +D ++ AGA++S KLA +AISRLQSLP G+I LLCD +V V DLTGYDRVM
Sbjct: 224 DLEPARTEDPALSIAGAVQSQKLAVRAISRLQSLPGGDIKLLCDTVVESVRDLTGYDRVM 283
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A PV +
Sbjct: 284 VYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVLL 343
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN--DQEQGR 355
+QD +L Q + L GSTLRAPHGCH++YM NMGSIASL M+V IN E++ N
Sbjct: 344 VQDDRLSQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEEDGSNAGGGRNSM 403
Query: 356 KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDM 415
KLWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK +LR QT+LCDM
Sbjct: 404 KLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRMQTLLCDM 463
Query: 416 LLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGST 475
LLRDSP GIVTQ+P++MDLVKCDGAA Y GK + LGV PTE QIKDI +WLL H ST
Sbjct: 464 LLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPTEAQIKDIVDWLLANHADST 523
Query: 476 GLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKD 535
GLSTDSL EAGYPGA ALGDAVCG+A IT +DFLFWFRSHTAKEIKWGGAKH KD
Sbjct: 524 GLSTDSLGEAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKD 583
Query: 536 GGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVNV- 593
G++MHPRSSF+AFLEVVK RS PWE EMDAIHSLQLILR S ++ E A +SK +
Sbjct: 584 DGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAAMNSKAVDGAV 643
Query: 594 -PSVDDRIEK-IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
P D E+ DEL + EMVRLIETA VPI AVDA G +NGWN+K AELTGL+V++A
Sbjct: 644 QPCRDMSGEQGNDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSVEEA 703
Query: 652 IGTALV-DLVAGDSVDVVKNMLSSAF 676
+G +LV DL+ ++ + V +LS A
Sbjct: 704 MGKSLVSDLIYKENEETVNKLLSRAL 729
>gi|363547575|gb|AEW26830.1| phytochrome P [Cycas ophiolitica]
Length = 589
Score = 845 bits (2184), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/601 (67%), Positives = 484/601 (80%), Gaps = 16/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 VHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPFGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL + GYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADTGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFK FLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKVFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 F 676
Sbjct: 587 L 587
>gi|363547782|gb|AEW26932.1| phytochrome P [Macrozamia elegans]
Length = 590
Score = 845 bits (2184), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/601 (67%), Positives = 487/601 (81%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ F ++ YSENA MLDLAP +VP +EQ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMEQV-FLTIGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H ++SGKPFYAI+HRIDVG+VID EPV D ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSRSSGKPFYAIVHRIDVGMVIDFEPVG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NM SIASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMANMCSIASLVMAVVIN-----------GNMKLWGLVVCHHTSPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYPGA + GDA
Sbjct: 348 CDGAALYYGGMVWVLGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASPGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWF SHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFGSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D +++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLKVQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLCHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|39777235|gb|AAR30887.1| phytochrome A [Sorghum bicolor]
Length = 1131
Score = 845 bits (2184), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/664 (62%), Positives = 501/664 (75%), Gaps = 12/664 (1%)
Query: 25 VAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSNVP---SSTVSAYLQRVQRGRLIQP 79
+ AQT++DA+L +++ES FDYS V ST + S V AYLQ +QRG+LIQP
Sbjct: 24 ILAQTTLDAELNAEYEESGDSFDYSKLVEAQRSTPSEQQGRSGKVIAYLQHIQRGKLIQP 83
Query: 80 FGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQ 139
FGC++A+DE++F V+ +SENAPEML HAVPN++ L +G +VR+LFT GA ALQ
Sbjct: 84 FGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLGIGTNVRSLFTDPGATALQ 143
Query: 140 KAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYK 199
KA F +V+LLNPIL+ CKTSGKPFYAI+HR LV+D EPV P + P TAAGAL+SYK
Sbjct: 144 KALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQSYK 203
Query: 200 LAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLE 259
LAAKAIS++QSLP G++ LC+ +V EV +LTGYDRVM YKFHEDEHGEV AE +P +E
Sbjct: 204 LAAKAISKIQSLPGGSMEALCNTVVKEVFELTGYDRVMAYKFHEDEHGEVFAEITKPGIE 263
Query: 260 PYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHG 319
PYLG HYPATDIPQA+RFL MKNKVRMICDC A VK+I+D+ L +SLCGSTLRAPH
Sbjct: 264 PYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKSVKIIEDEALSIDISLCGSTLRAPHS 323
Query: 320 CHARYMENMGSIASLVMSVTINEAEDE------LDNDQEQGRKLWGLVVCHHTSPRFVPF 373
CH +YMENM SIASLVM+V +NE E++ Q++ ++LWGL+VCHH SPR+VPF
Sbjct: 324 CHLQYMENMNSIASLVMAVVVNENEEDDEPGPEQPPQQQKKKRLWGLIVCHHESPRYVPF 383
Query: 374 PLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD-SPVGIVTQTPNVM 432
PLRYACEFL QVF V VNKE EL Q+REK ILR QT+L DML ++ SP+ IV+ +PN+M
Sbjct: 384 PLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKEASPLSIVSGSPNIM 443
Query: 433 DLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALA 492
DLVKCDGAAL Y K+W L PTE QI+DIA WL E H STGLSTDSL +AGYPGA +
Sbjct: 444 DLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDAGYPGAAS 503
Query: 493 LGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEV 552
LGD +CG+A KITSKD LFWFRSHTA EIKWGGAKHD KD R+MHPR SFKAFLEV
Sbjct: 504 LGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLSFKAFLEV 563
Query: 553 VKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNE 612
VK +SLPW D EMDAIHSLQLILRG+L D + ++ D +++ + EL+ +T+E
Sbjct: 564 VKMKSLPWSDYEMDAIHSLQLILRGTLNDALKPVQASGLDNQIGDLKLDGLAELQAVTSE 623
Query: 613 MVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNML 672
MVRL+ETA VPILAVD +G VNGWN K AEL+GL VD+AIG ++ LV SV +V+ ML
Sbjct: 624 MVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHILTLVEDSSVSIVQRML 683
Query: 673 SSAF 676
A
Sbjct: 684 YLAL 687
>gi|363547715|gb|AEW26900.1| phytochrome P [Encephalartos laevifolius]
Length = 590
Score = 845 bits (2184), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/601 (67%), Positives = 486/601 (80%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEV AE RR
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVAAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM +MGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMASMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+ ++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSLSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W LGVTP E QIKDIA+WLLE H TGLS DSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSMDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|39777241|gb|AAR30890.1| phytochrome A [Sorghum bicolor subsp. verticilliflorum]
Length = 1131
Score = 845 bits (2184), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/664 (62%), Positives = 501/664 (75%), Gaps = 12/664 (1%)
Query: 25 VAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSNVP---SSTVSAYLQRVQRGRLIQP 79
+ AQT++DA+L +++ES FDYS V ST + S V AYLQ +QRG+LIQP
Sbjct: 24 ILAQTTLDAELNAEYEESGDSFDYSKLVEAQRSTPSEQQGRSGKVIAYLQHIQRGKLIQP 83
Query: 80 FGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQ 139
FGC++A+DE++F V+ +SENAPEML HAVPN++ L +G +VR+LFT GA ALQ
Sbjct: 84 FGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLGIGTNVRSLFTDPGATALQ 143
Query: 140 KAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYK 199
KA F +V+LLNPIL+ CKTSGKPFYAI+HR LV+D EPV P + P TAAGAL+SYK
Sbjct: 144 KALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQSYK 203
Query: 200 LAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLE 259
LAAKAIS++QSLP G++ LC+ +V EV +LTGYDRVM YKFHEDEHGEV AE +P +E
Sbjct: 204 LAAKAISKIQSLPGGSMEALCNTVVKEVFELTGYDRVMAYKFHEDEHGEVFAEITKPGIE 263
Query: 260 PYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHG 319
PYLG HYPATDIPQA+RFL MKNKVRMICDC A VK+I+D+ L +SLCGSTLRAPH
Sbjct: 264 PYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKSVKIIEDEALSIDISLCGSTLRAPHS 323
Query: 320 CHARYMENMGSIASLVMSVTINEAEDE------LDNDQEQGRKLWGLVVCHHTSPRFVPF 373
CH +YMENM SIASLVM+V +NE E++ Q++ ++LWGL+VCHH SPR+VPF
Sbjct: 324 CHLQYMENMNSIASLVMAVVVNENEEDDEPGPEQPPQQQKKKRLWGLIVCHHESPRYVPF 383
Query: 374 PLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD-SPVGIVTQTPNVM 432
PLRYACEFL QVF V VNKE EL Q+REK ILR QT+L DML ++ SP+ IV+ +PN+M
Sbjct: 384 PLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKEASPLSIVSGSPNIM 443
Query: 433 DLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALA 492
DLVKCDGAAL Y K+W L PTE QI+DIA WL E H STGLSTDSL +AGYPGA +
Sbjct: 444 DLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDAGYPGAAS 503
Query: 493 LGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEV 552
LGD +CG+A KITSKD LFWFRSHTA EIKWGGAKHD KD R+MHPR SFKAFLEV
Sbjct: 504 LGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLSFKAFLEV 563
Query: 553 VKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNE 612
VK +SLPW D EMDAIHSLQLILRG+L D + ++ D +++ + EL+ +T+E
Sbjct: 564 VKMKSLPWSDYEMDAIHSLQLILRGTLNDALKPVQASGLDNQIGDLKLDGLAELQAVTSE 623
Query: 613 MVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNML 672
MVRL+ETA VPILAVD +G VNGWN K AEL+GL VD+AIG ++ LV SV +V+ ML
Sbjct: 624 MVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHILTLVEDSSVSIVQRML 683
Query: 673 SSAF 676
A
Sbjct: 684 YLAL 687
>gi|363547746|gb|AEW26915.1| phytochrome P [Encephalartos pterogonus]
Length = 590
Score = 845 bits (2184), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/601 (67%), Positives = 485/601 (80%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D + AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAATSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM +MGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMASMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N EV+ +AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMEVQSAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYP A +LGDA
Sbjct: 348 CDGAALYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRS TAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSQTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLRVGEAMGKSLVCDLVYEESMETVERLLHHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|240119399|dbj|BAH79248.1| phytochrome B [Cardamine nipponica]
Length = 1184
Score = 845 bits (2184), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/686 (60%), Positives = 509/686 (74%), Gaps = 21/686 (3%)
Query: 12 SRSSSARSKQN---------ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTS 57
S + S R +QN ++ Q ++DA+L F++S FDYS S+ ++ S
Sbjct: 44 SGTKSLRPQQNQPQSHTVSMSKAIQQYTVDARLHAVFEQSGGSGKSFDYSQSLKTTTYGS 103
Query: 58 NVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQ 117
+VP ++AYL R+QRG IQPFGCMIAVDE F ++GYSENA EML L P +VP++E+
Sbjct: 104 SVPEQQITAYLSRIQRGGFIQPFGCMIAVDESTFRIIGYSENAREMLGLMPQSVPSLEKP 163
Query: 118 DALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVI 177
+ L +G DVR+LF S + L++A ++ +LNP+ IH K +GKPFYAILHRIDVG+VI
Sbjct: 164 EILAMGTDVRSLFAPSSSILLERAFVARDITILNPVWIHSKNTGKPFYAILHRIDVGVVI 223
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEP +D ++ AGA++S KLA +AISRLQSLP G+I LLCD +V V DLTGYDRVM
Sbjct: 224 DLEPARTEDPALSIAGAVQSQKLAVRAISRLQSLPGGDIKLLCDTVVESVRDLTGYDRVM 283
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A PV +
Sbjct: 284 VYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVLL 343
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN--DQEQGR 355
+QD +L Q + L GSTLRAPHGCH++YM NMGSIASL M+V IN E++ N
Sbjct: 344 VQDDRLSQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEEDGSNAGGGRNSM 403
Query: 356 KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDM 415
KLWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK +LR QT+LCDM
Sbjct: 404 KLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRMQTLLCDM 463
Query: 416 LLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGST 475
LLRDSP GIVTQ+P++MDLVKCDGAA Y GK + LGV PTE QIKDI +WLL H ST
Sbjct: 464 LLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPTEAQIKDIVDWLLANHADST 523
Query: 476 GLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKD 535
GLSTDSL EAGYPGA ALGDAVCG+A IT +DFLFWFRSHTAKEIKWGGAKH KD
Sbjct: 524 GLSTDSLGEAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKD 583
Query: 536 GGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVNV- 593
G++MHPRSSF+AFLEVVK RS PWE EMDAIHSLQLILR S ++ E A +SK +
Sbjct: 584 DGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAAMNSKAVDGAV 643
Query: 594 -PSVDDRIEK-IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
P D E+ DEL + EMVRLIETA VPI AVDA G +NGWN+K AELTGL+V++A
Sbjct: 644 QPCRDMSGEQGNDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSVEEA 703
Query: 652 IGTALV-DLVAGDSVDVVKNMLSSAF 676
+G +LV DL+ ++ + V +LS A
Sbjct: 704 MGKSLVSDLIYKENEETVNKLLSRAL 729
>gi|39777251|gb|AAR30895.1| phytochrome A [Sorghum bicolor subsp. verticilliflorum]
Length = 1131
Score = 845 bits (2183), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/664 (62%), Positives = 501/664 (75%), Gaps = 12/664 (1%)
Query: 25 VAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSNVP---SSTVSAYLQRVQRGRLIQP 79
+ AQT++DA+L +++ES FDYS V ST + S V AYLQ +QRG+LIQP
Sbjct: 24 ILAQTTLDAELNAEYEESGDSFDYSKLVEAQRSTPSEQQGRSGKVIAYLQHIQRGKLIQP 83
Query: 80 FGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQ 139
FGC++A+DE++F V+ +SENAPEML HAVPN++ L +G +VR+LFT GA ALQ
Sbjct: 84 FGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLGIGTNVRSLFTDPGATALQ 143
Query: 140 KAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYK 199
KA F +V+LLNPIL+ CKTSGKPFYAI+HR LV+D EPV P + P TAAGAL+SYK
Sbjct: 144 KALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQSYK 203
Query: 200 LAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLE 259
LAAKAIS++QSLP G++ LC+ +V EV +LTGYDRVM YKFHEDEHGEV AE +P +E
Sbjct: 204 LAAKAISKIQSLPGGSMEALCNTVVKEVFELTGYDRVMAYKFHEDEHGEVFAEITKPGIE 263
Query: 260 PYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHG 319
PYLG HYPATDIPQA+RFL MKNKVRMICDC A VK+I+D+ L +SLCGSTLRAPH
Sbjct: 264 PYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKSVKIIEDEALSIDISLCGSTLRAPHS 323
Query: 320 CHARYMENMGSIASLVMSVTINEAEDE------LDNDQEQGRKLWGLVVCHHTSPRFVPF 373
CH +YMENM SIASLVM+V +NE E++ Q++ ++LWGL+VCHH SPR+VPF
Sbjct: 324 CHLQYMENMNSIASLVMAVVVNENEEDDEPGPEQPPQQQKKKRLWGLIVCHHESPRYVPF 383
Query: 374 PLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD-SPVGIVTQTPNVM 432
PLRYACEFL QVF V VNKE EL Q+REK ILR QT+L DML ++ SP+ IV+ +PN+M
Sbjct: 384 PLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKEASPLSIVSGSPNIM 443
Query: 433 DLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALA 492
DLVKCDGAAL Y K+W L PTE QI+DIA WL E H STGLSTDSL +AGYPGA +
Sbjct: 444 DLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDAGYPGAAS 503
Query: 493 LGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEV 552
LGD +CG+A KITSKD LFWFRSHTA EIKWGGAKHD KD R+MHPR SFKAFLEV
Sbjct: 504 LGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLSFKAFLEV 563
Query: 553 VKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNE 612
VK +SLPW D EMDAIHSLQLILRG+L D + ++ D +++ + EL+ +T+E
Sbjct: 564 VKMKSLPWSDYEMDAIHSLQLILRGTLNDALKPVQASGLDNQIGDLKLDGLAELQAVTSE 623
Query: 613 MVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNML 672
MVRL+ETA VPILAVD +G VNGWN K AEL+GL VD+AIG ++ LV SV +V+ ML
Sbjct: 624 MVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHILTLVEDSSVSIVQRML 683
Query: 673 SSAF 676
A
Sbjct: 684 YLAL 687
>gi|363547513|gb|AEW26800.1| phytochrome P [Cycas brachycantha]
Length = 589
Score = 845 bits (2183), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/601 (67%), Positives = 486/601 (80%), Gaps = 16/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+V D EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVTDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S +LA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQELAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSVRAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV +LV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHNLVYEESVETVERLLYHA 586
Query: 676 F 676
Sbjct: 587 L 587
>gi|240119391|dbj|BAH79244.1| phytochrome B [Cardamine nipponica]
Length = 1184
Score = 845 bits (2183), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/686 (60%), Positives = 509/686 (74%), Gaps = 21/686 (3%)
Query: 12 SRSSSARSKQN---------ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTS 57
S + S R +QN ++ Q ++DA+L F++S FDYS S+ ++ S
Sbjct: 44 SGTKSLRPQQNQPQSHTVSMSKAIQQYTVDARLHAVFEQSGGSGKSFDYSQSLKTTTYGS 103
Query: 58 NVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQ 117
+VP ++AYL R+QRG IQPFGCMIAVDE F ++GYSENA EML L P +VP++E+
Sbjct: 104 SVPEQQITAYLSRIQRGGFIQPFGCMIAVDESTFRIIGYSENAREMLGLMPQSVPSLEKP 163
Query: 118 DALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVI 177
+ L +G DVR+LF S + L++A ++ +LNP+ IH K +GKPFYAILHRIDVG+VI
Sbjct: 164 EILAMGTDVRSLFAPSSSILLERAFVARDITILNPVWIHSKNTGKPFYAILHRIDVGVVI 223
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEP +D ++ AGA++S KLA +AISRLQSLP G+I LLCD +V V DLTGYDRVM
Sbjct: 224 DLEPARTEDPALSIAGAVQSQKLAVRAISRLQSLPGGDIKLLCDTVVESVRDLTGYDRVM 283
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A PV +
Sbjct: 284 VYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVLL 343
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN--DQEQGR 355
+QD +L Q + L GSTLRAPHGCH++YM NMGSIASL M+V IN E++ N
Sbjct: 344 VQDDRLSQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEEDGSNAGGGRNSM 403
Query: 356 KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDM 415
KLWGLVVCHHT+ R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK +LR QT+LCDM
Sbjct: 404 KLWGLVVCHHTTSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRMQTLLCDM 463
Query: 416 LLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGST 475
LLRDSP GIVTQ+P++MDLVKCDGAA Y GK + LGV PTE QIKDI +WLL H ST
Sbjct: 464 LLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPTEAQIKDIVDWLLANHADST 523
Query: 476 GLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKD 535
GLSTDSL EAGYPGA ALGDAVCG+A IT +DFLFWFRSHTAKEIKWGGAKH KD
Sbjct: 524 GLSTDSLGEAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKD 583
Query: 536 GGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVNV- 593
G++MHPRSSF+AFLEVVK RS PWE EMDAIHSLQLILR S ++ E A +SK +
Sbjct: 584 DGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAAMNSKAVDGAV 643
Query: 594 -PSVDDRIEK-IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
P D E+ DEL + EMVRLIETA VPI AVDA G +NGWN+K AELTGL+V++A
Sbjct: 644 QPCRDMSGEQGNDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSVEEA 703
Query: 652 IGTALV-DLVAGDSVDVVKNMLSSAF 676
+G +LV DL+ ++ + V +LS A
Sbjct: 704 MGKSLVSDLIYKENEETVNKLLSRAL 729
>gi|363547828|gb|AEW26954.1| phytochrome P [Zamia amblyphyllidia]
Length = 590
Score = 845 bits (2183), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/601 (66%), Positives = 488/601 (81%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQP GCM+AV+E+ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT + A
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERE-LLTIGTDVRTLFTPASAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NP+ +H K+SGKPFYAILHRIDVG+VID EPV ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPVWMHSKSSGKPFYAILHRIDVGMVIDFEPVG--GAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+ LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDTGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L G+TLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGATLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGS+ASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMN-----------VNMKLWGLVVCHHTSPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LG+TPTE QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWMLGMTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTA EIKWGGAKH + KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTANEIKWGGAKHHADDKDEGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDINDSETKTMIHSRLTDLRLQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G + V DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSFVCDLIYEESMETVERLLHHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|363547842|gb|AEW26961.1| phytochrome P [Zamia furfuracea]
Length = 590
Score = 845 bits (2183), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/601 (66%), Positives = 488/601 (81%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQP GCM+AV+E+ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT + A
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERE-LLTIGTDVRTLFTPASAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NP+ + K+SGKPFYAILHRIDVG+VID EPV ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPVWMQSKSSGKPFYAILHRIDVGMVIDFEPVG--GAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYP TDIPQASRFL M+N+VRMICDC A P++VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPTTDIPQASRFLFMQNRVRMICDCRATPIRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGS+ASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMN-----------VNMKLWGLVVCHHTSPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTPTE QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLTDLRLQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAV++ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVNSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|363547599|gb|AEW26842.1| phytochrome P [Cycas semota]
Length = 589
Score = 845 bits (2183), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/601 (67%), Positives = 483/601 (80%), Gaps = 16/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH +YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 AHGCHYQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P GIVTQ+P++MDL K
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPFGIVTQSPSIMDLAK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFK FLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKVFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 F 676
Sbjct: 587 L 587
>gi|363547571|gb|AEW26828.1| phytochrome P [Cycas multipinnata]
Length = 589
Score = 845 bits (2183), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/601 (67%), Positives = 486/601 (80%), Gaps = 16/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGPLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSVRAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV +LV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHNLVYEESVETVERLLYHA 586
Query: 676 F 676
Sbjct: 587 L 587
>gi|363547505|gb|AEW26796.1| phytochrome P [Cycas armstrongii]
Length = 589
Score = 845 bits (2182), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/601 (67%), Positives = 484/601 (80%), Gaps = 16/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTL T S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLLTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPFGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFK FLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKVFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 F 676
Sbjct: 587 L 587
>gi|363547856|gb|AEW26968.1| phytochrome P [Zamia lawsoniana]
Length = 590
Score = 845 bits (2182), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/601 (66%), Positives = 487/601 (81%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQP GCM+AV+E+ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT + A
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERE-LLTIGTDVRTLFTPASAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NP+ + K+SGKPFYAILHRIDVG+VID EPV ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPVWMQSKSSGKPFYAILHRIDVGMVIDFEPVG--GAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYP TDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPTTDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGS+ASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMN-----------VNMKLWGLVVCHHTSPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E +L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMESQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTPTE QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLTDLRLQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAV++ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVNSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|363547507|gb|AEW26797.1| phytochrome P [Cycas basaltica]
Length = 589
Score = 845 bits (2182), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/601 (67%), Positives = 484/601 (80%), Gaps = 16/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 VHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPFGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFK FLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKVFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMMHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IE A PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IEAATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 F 676
Sbjct: 587 L 587
>gi|363547872|gb|AEW26976.1| phytochrome P [Zamia picta]
Length = 590
Score = 845 bits (2182), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/601 (66%), Positives = 488/601 (81%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQP GCM+AV+E+ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT + A
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERE-LLTIGTDVRTLFTPASAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NP+ + K+SGKPFYAILHRIDVG+VID EPV ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPVWMQSKSSGKPFYAILHRIDVGMVIDFEPVG--GAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYP TDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPTTDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGS+ASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMN-----------VNMKLWGLVVCHHTSPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTPTE QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEMKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLTDLRLQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAV++ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVNSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|363547854|gb|AEW26967.1| phytochrome P [Zamia lacandona]
Length = 590
Score = 845 bits (2182), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/601 (66%), Positives = 487/601 (81%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQP GCM+AV+E+ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT + A
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERE-LLTIGTDVRTLFTPASAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NP+ + K+SGKPFYAILHRIDVG+VID EPV ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPVWMQSKSSGKPFYAILHRIDVGMVIDFEPVG--GAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCH +YM NMGS+ASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHGQYMANMGSVASLVMAVVMN-----------VNMKLWGLVVCHHTSPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTPTE QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEMKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLTDLRLQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKPLVCDLIYEESMETVERLLHHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|240119403|dbj|BAH79250.1| phytochrome B [Cardamine nipponica]
Length = 1184
Score = 844 bits (2181), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/686 (60%), Positives = 508/686 (74%), Gaps = 21/686 (3%)
Query: 12 SRSSSARSKQN---------ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTS 57
S + S R +QN ++ Q ++DA+L F++S FDYS S+ ++ S
Sbjct: 44 SGTKSLRPQQNQPQSHTVSMSKAIQQYTVDARLHAVFEQSGGSGKSFDYSQSLKTTTYGS 103
Query: 58 NVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQ 117
+VP ++AYL R+QRG IQPFGCMIAVDE F ++GYSENA EML L P +VP++E+
Sbjct: 104 SVPEQQITAYLSRIQRGGFIQPFGCMIAVDESTFRIIGYSENAREMLGLMPQSVPSLEKP 163
Query: 118 DALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVI 177
+ L +G DVR+LF S + L++A ++ +LNP+ IH K +GKPFYAILHRIDVG+VI
Sbjct: 164 EILAMGTDVRSLFAPSSSILLERAFVARDITILNPVWIHSKNTGKPFYAILHRIDVGVVI 223
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEP +D ++ AGA++S KLA +AISRLQSLP G+I LLCD +V V DLTGYDRVM
Sbjct: 224 DLEPARTEDPALSIAGAVQSQKLAVRAISRLQSLPGGDIKLLCDTVVESVRDLTGYDRVM 283
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A PV +
Sbjct: 284 VYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVLL 343
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN--DQEQGR 355
+QD +L Q + L GSTLRAPHGCH++YM NMGSIASL M+V IN E++ N
Sbjct: 344 VQDDRLSQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEEDGSNAGGGRNSM 403
Query: 356 KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDM 415
KLWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK +LR QT+LCDM
Sbjct: 404 KLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRMQTLLCDM 463
Query: 416 LLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGST 475
LLRDSP GIVTQ+P++MD VKCDGAA Y GK + LGV PTE QIKDI +WLL H ST
Sbjct: 464 LLRDSPAGIVTQSPSIMDFVKCDGAAFLYHGKYYPLGVAPTEAQIKDIVDWLLANHADST 523
Query: 476 GLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKD 535
GLSTDSL EAGYPGA ALGDAVCG+A IT +DFLFWFRSHTAKEIKWGGAKH KD
Sbjct: 524 GLSTDSLGEAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKD 583
Query: 536 GGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVNV- 593
G++MHPRSSF+AFLEVVK RS PWE EMDAIHSLQLILR S ++ E A +SK +
Sbjct: 584 DGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAAMNSKAVDGAV 643
Query: 594 -PSVDDRIEK-IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
P D E+ DEL + EMVRLIETA VPI AVDA G +NGWN+K AELTGL+V++A
Sbjct: 644 QPCRDMSGEQGNDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSVEEA 703
Query: 652 IGTALV-DLVAGDSVDVVKNMLSSAF 676
+G +LV DL+ ++ + V +LS A
Sbjct: 704 MGKSLVSDLIYKENEETVNKLLSRAL 729
>gi|363547525|gb|AEW26806.1| phytochrome P [Cycas circinalis]
Length = 589
Score = 844 bits (2181), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/601 (67%), Positives = 485/601 (80%), Gaps = 16/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 VHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKH+LRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHMLRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFK FLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKVFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGRLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 F 676
Sbjct: 587 L 587
>gi|363547577|gb|AEW26831.1| phytochrome P [Cycas panzhihuaensis]
Length = 589
Score = 844 bits (2181), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/601 (67%), Positives = 484/601 (80%), Gaps = 16/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQP GCM+AV+E F ++ YSENA EMLDL P +VP +E++ L LG DVRTLFT S AA
Sbjct: 2 IQPLGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMERE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
L KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 PLGKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGGIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 PHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAAL Y G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALCYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 F 676
Sbjct: 587 L 587
>gi|363547565|gb|AEW26825.1| phytochrome P [Cycas micholitzii]
Length = 589
Score = 844 bits (2180), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/601 (67%), Positives = 485/601 (80%), Gaps = 16/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+ RIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVPRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 PHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSVRAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGY GA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYTGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IET PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETVTAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 F 676
Sbjct: 587 L 587
>gi|363547848|gb|AEW26964.1| phytochrome P [Zamia ipetiensis]
Length = 590
Score = 844 bits (2180), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/601 (66%), Positives = 486/601 (80%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQP GCM+AV+E+ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT + A
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERE-LLTIGTDVRTLFTPASAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NP+ +H K+SGKPFYAILHRIDVG+VID EPV ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPVWMHSKSSGKPFYAILHRIDVGMVIDFEPVG--GAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A V+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATTVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGS+ASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMN-----------VNMKLWGLVVCHHTSPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GI TQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIATQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTPTE QI DIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWMLGVTPTEAQITDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD +K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSKTKTMIHSRLTDLRLQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|363547585|gb|AEW26835.1| phytochrome P [Cycas platyphylla]
Length = 589
Score = 844 bits (2180), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/601 (67%), Positives = 483/601 (80%), Gaps = 16/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH +YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 AHGCHYQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPFGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KDG R MHPRSSFK FLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKDGWR-MHPRSSFKVFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 F 676
Sbjct: 587 L 587
>gi|363547533|gb|AEW26810.1| phytochrome P [Cycas couttsiana]
Length = 589
Score = 844 bits (2180), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/601 (67%), Positives = 484/601 (80%), Gaps = 16/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH +YM NMGSIASL+++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 AHGCHYQYMANMGSIASLILAVIIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPFGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFK FLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKVFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGW++K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWDAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 F 676
Sbjct: 587 L 587
>gi|363547832|gb|AEW26956.1| phytochrome P [Zamia chigua]
Length = 590
Score = 843 bits (2179), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/601 (66%), Positives = 487/601 (81%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQP GCM+AV+E+ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT + A
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERE-LLTIGTDVRTLFTPASAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++ +NP+ +H K+SGKPFYAILHRIDVG+VID EPV ++ AGA++
Sbjct: 61 SLEKAAAAQEISFMNPVWMHSKSSGKPFYAILHRIDVGMVIDFEPVG--GAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGS+ASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMN-----------VNMKLWGLVVCHHTSPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTPTE QIKDIA+WLLE H TGLSTDSL +AGYPG +LGDA
Sbjct: 348 CDGAALYYGGMVWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGVASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SL WE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLLWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLTDLRLQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|363547521|gb|AEW26804.1| phytochrome P [Cycas chamberlainii]
gi|363547589|gb|AEW26837.1| phytochrome P [Cycas riuminiana]
Length = 589
Score = 843 bits (2178), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/601 (67%), Positives = 484/601 (80%), Gaps = 16/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLE YLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLERYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EK ILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKRILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFK FLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKVFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 F 676
Sbjct: 587 L 587
>gi|255557437|ref|XP_002519749.1| phytochrome B, putative [Ricinus communis]
gi|223541166|gb|EEF42722.1| phytochrome B, putative [Ricinus communis]
Length = 1131
Score = 843 bits (2178), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/666 (61%), Positives = 504/666 (75%), Gaps = 18/666 (2%)
Query: 17 ARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRV 71
A + +N AQ + DA L +F++S F+YS SV S+ NVP ++AYL R+
Sbjct: 26 ATNSENTATIAQYNADAGLLAEFEQSGVSGKSFNYSRSV--LSAPHNVPEEQITAYLSRI 83
Query: 72 QRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFT 131
QRG LIQPFGCM+A++E F ++ YSEN +L L+ +V Q L +GIDVR LFT
Sbjct: 84 QRGGLIQPFGCMVAIEEPTFRIISYSENCFHLLGLSASSVLESNQVKGL-IGIDVRALFT 142
Query: 132 SSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTA 191
A+L KAA E+++LNPI ++ +TS KPFYAILHRIDVG+VIDLEP D ++
Sbjct: 143 PQSGASLSKAAASREISMLNPIWVYSRTSQKPFYAILHRIDVGIVIDLEPARSGDPVLSL 202
Query: 192 AGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVA 251
AGA++S KLA +AISRLQSLP G+I +LCD +V +V LTGYDRVMVYKFH+D+HGEV++
Sbjct: 203 AGAVQSQKLAVRAISRLQSLPGGDIGMLCDTVVEDVQKLTGYDRVMVYKFHDDDHGEVLS 262
Query: 252 ECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCG 311
E RR DLEPYLG HYPATDIPQA+RFL +N+VRMICDC A PV+VIQ ++L PL L
Sbjct: 263 EIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCHANPVRVIQSEELKHPLCLVN 322
Query: 312 STLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFV 371
STLR+PHGCH +YM NMGSIASLVM+V IN ND KLWGLVVCHHTSPR+V
Sbjct: 323 STLRSPHGCHTQYMANMGSIASLVMAVVIN------GND---STKLWGLVVCHHTSPRYV 373
Query: 372 PFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNV 431
PFPLRYACEFL+Q FG+Q+ E++L+A+L EK IL+TQT+LCDMLLRD+P GIVTQ+P++
Sbjct: 374 PFPLRYACEFLMQAFGLQLYMELQLAAKLVEKKILQTQTLLCDMLLRDAPFGIVTQSPSI 433
Query: 432 MDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGAL 491
MDLVKCDGAALYYRGK WLLG+TPTE Q+KDIA+WLL H STGL+TDSL +AGYPGAL
Sbjct: 434 MDLVKCDGAALYYRGKCWLLGITPTESQVKDIADWLLNNHGDSTGLTTDSLADAGYPGAL 493
Query: 492 ALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLE 551
LGDAVCG+A +ITS+DFLFWFRSHTAKEIKWGGAKH KD G++MHPRSSF AFLE
Sbjct: 494 LLGDAVCGMATARITSRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFNAFLE 553
Query: 552 VVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITN 611
VVK RS+PWE E++AIHSLQLI+R S QD SK +VN D ++ IDEL +
Sbjct: 554 VVKSRSMPWEVSEINAIHSLQLIMRDSFQDMEDSASKAMVNAQQTDTDVQGIDELSSVAC 613
Query: 612 EMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKN 670
EMVRLIETA PI VD++G+VNGWN+K AELTGL +A+G +LV ++V DS + V++
Sbjct: 614 EMVRLIETATAPIFGVDSAGSVNGWNAKIAELTGLQASEAMGKSLVREVVHKDSYEFVES 673
Query: 671 MLSSAF 676
+L A
Sbjct: 674 LLCRAL 679
>gi|363547515|gb|AEW26801.1| phytochrome P [Cycas cairnsiana]
Length = 589
Score = 843 bits (2178), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/601 (67%), Positives = 483/601 (80%), Gaps = 16/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWTRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHED+HGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDKHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH +YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 AHGCHYQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPFGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKD+A+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDMADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFK FLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKVFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 F 676
Sbjct: 587 L 587
>gi|363547605|gb|AEW26845.1| phytochrome P [Cycas simplicipinna]
Length = 589
Score = 843 bits (2178), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/596 (67%), Positives = 484/596 (81%), Gaps = 16/596 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAA--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AI RLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAIPRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSVRAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGATSLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNM 671
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV +LV +SV+ V+ +
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHNLVYEESVETVERL 582
>gi|363547882|gb|AEW26981.1| phytochrome P [Zamia purpurea]
Length = 590
Score = 843 bits (2177), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/601 (66%), Positives = 487/601 (81%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQP GCM+AV+E+ F ++ YSENA ML+LAP +VP +E++ LT+G DVRTLFT + A
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLNLAPQSVPTMERE-LLTIGTDVRTLFTPASAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NP+ + K+SGKPFYAILHRIDVG+VID EPV ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPVWMQSKSSGKPFYAILHRIDVGMVIDFEPVG--GAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCH +YM NMGS+ASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHGQYMANMGSVASLVMAVVMN-----------VNMKLWGLVVCHHTSPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTPTE QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEMKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLTDLRLQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKPLVCDLIYEESMETVERLLHHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|363547548|gb|AEW26817.1| phytochrome P [Cycas guizhouensis]
Length = 589
Score = 843 bits (2177), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/601 (67%), Positives = 485/601 (80%), Gaps = 16/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLW LVVCHHTS R +PFP+R
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWDLVVCHHTSVRAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
Y CEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YVCEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGMDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV +LV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHNLVYEESVETVERLLYHA 586
Query: 676 F 676
Sbjct: 587 L 587
>gi|363547891|gb|AEW26985.1| phytochrome P [Zamia variegata]
Length = 590
Score = 843 bits (2177), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/601 (66%), Positives = 487/601 (81%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQP GCM+AV+E+ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT + A
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERE-LLTIGTDVRTLFTPASAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NP+ + K+SGKPFYAILHRIDVG+VID EPV ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPVWMQSKSSGKPFYAILHRIDVGMVIDFEPVG--GAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYP TDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPTTDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGS+ASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMN-----------VNMKLWGLVVCHHTSPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTPTE QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEMKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLTDLRLQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAV++ G VNGWN+K AEL GL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVNSGGFVNGWNAKLAELAGLPVGEAMGKSLVCDLIYEESMETVERLLHHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|363547511|gb|AEW26799.1| phytochrome P [Cycas bougainvilleana]
Length = 589
Score = 842 bits (2176), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/601 (67%), Positives = 484/601 (80%), Gaps = 16/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGIVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE R
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIGRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAK +KWGGAKH KD GR+MHPRSSFK FLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKGVKWGGAKHHPDDKD-GRRMHPRSSFKVFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 F 676
Sbjct: 587 L 587
>gi|39777259|gb|AAR30899.1| phytochrome A [Sorghum propinquum]
Length = 1131
Score = 842 bits (2175), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/664 (61%), Positives = 499/664 (75%), Gaps = 12/664 (1%)
Query: 25 VAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSNVP---SSTVSAYLQRVQRGRLIQP 79
+ AQT++DA+L +++ES FDYS V ST + S V AYLQ +QRG+LIQP
Sbjct: 24 ILAQTTLDAELNAEYEESGDSFDYSKLVEAQRSTPSEQQGRSGKVIAYLQHIQRGKLIQP 83
Query: 80 FGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQ 139
FGC++A DE++F V+ +SENAPEML HAVPN++ L +G +VR+LFT GA ALQ
Sbjct: 84 FGCLLAFDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLGIGTNVRSLFTDPGATALQ 143
Query: 140 KAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYK 199
KA F +V+LLNPIL+ CKTSGKPFYAI+HR LV+D EPV P + P TAAGAL+SYK
Sbjct: 144 KALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQSYK 203
Query: 200 LAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLE 259
LAAKAIS++QSLP G++ LC+ +V EV +LTGYDRVM YKFHEDEHGEV AE +P +E
Sbjct: 204 LAAKAISKIQSLPGGSMEALCNTVVKEVFELTGYDRVMAYKFHEDEHGEVFAEITKPGIE 263
Query: 260 PYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHG 319
PYLG HYPATDIPQA+RFL MKNKVRMICDC A VK+I+D+ L +SLCGSTLRAPH
Sbjct: 264 PYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKSVKIIEDEALSIDISLCGSTLRAPHS 323
Query: 320 CHARYMENMGSIASLVMSVTINEAEDE------LDNDQEQGRKLWGLVVCHHTSPRFVPF 373
CH +YMENM SIASLVM+V +NE E++ Q++ ++LWGL+VCHH SPR+VPF
Sbjct: 324 CHLQYMENMNSIASLVMAVVVNENEEDDEPGPEQPPQQQKKKRLWGLIVCHHESPRYVPF 383
Query: 374 PLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD-SPVGIVTQTPNVM 432
PLRYACEFL QVF V VNKE EL Q+REK ILR QT+L DML ++ SP+ IV+ +PN+M
Sbjct: 384 PLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTMLSDMLFKEASPLSIVSGSPNIM 443
Query: 433 DLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALA 492
DLVKCDGAAL Y K+W L PTE QI+DIA WL E H STGLSTDSL +A YPGA +
Sbjct: 444 DLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDARYPGAAS 503
Query: 493 LGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEV 552
LGD +CG+A KITSKD LFWFRSHTA EIKWGGAKHD KD R+MHPR SFKAFLEV
Sbjct: 504 LGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLSFKAFLEV 563
Query: 553 VKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNE 612
VK +SLPW D EMDAIHSLQLILRG+L D + ++ D +++ + EL+ +T+E
Sbjct: 564 VKMKSLPWSDYEMDAIHSLQLILRGTLNDALKPVQASGLDNQIGDLKLDGLAELQAVTSE 623
Query: 613 MVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNML 672
MVRL+ETA VPILAVD +G VNGWN K AEL+GL VD+AIG ++ LV SV +V+ ML
Sbjct: 624 MVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHILTLVEDSSVSIVQRML 683
Query: 673 SSAF 676
A
Sbjct: 684 YLAL 687
>gi|363547597|gb|AEW26841.1| phytochrome P [Cycas segmentifida]
Length = 589
Score = 842 bits (2175), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/601 (67%), Positives = 484/601 (80%), Gaps = 16/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+A +E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAAEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEMSLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSVRTIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWG AKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGEAKHHPDDKD-GRRMHPRSSFKAFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SL WE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLSWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLHHA 586
Query: 676 F 676
Sbjct: 587 L 587
>gi|20288|emb|CAA32375.1| phytochrome [Oryza sativa Indica Group]
Length = 1128
Score = 842 bits (2174), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/641 (63%), Positives = 489/641 (76%), Gaps = 12/641 (1%)
Query: 25 VAAQTSIDAKLAEDFDE--SDFDYSTSVNISSST---SNVPSSTVSAYLQRVQRGRLIQP 79
+ AQT++DA+L +++E FDYS V +T S V AYL +QR +LIQP
Sbjct: 24 ILAQTTLDAELNAEYEEYGDSFDYSKLVEAQRTTGPEQQARSEKVIAYLHHIQRAKLIQP 83
Query: 80 FGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQ 139
FGC++A+DE+ F V+ SENAPEML HAVP+++ L +G +VR+LFT G ALQ
Sbjct: 84 FGCLLALDEKTFNVIALSENAPEMLTTVSHAVPSVDDPPKLRIGTNVRSLFTDPGTTALQ 143
Query: 140 KAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYK 199
KA F +V+LLNPIL+ CKTSGKPFYAI+HR LV+D EPV P + P TAAGAL+SYK
Sbjct: 144 KALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQSYK 203
Query: 200 LAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLE 259
LAAKAIS++QSLP G++ +LC+ +V E+ DLTGYDRVM YKFHED+HGEV AE +P LE
Sbjct: 204 LAAKAISKIQSLPGGSMEVLCNTVVKELFDLTGYDRVMAYKFHEDDHGEVFAEITKPGLE 263
Query: 260 PYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHG 319
PYLG HYPATDIPQA+RFL MKNKVRMICDC A +K+I+D+ L +SLCGSTLRAPH
Sbjct: 264 PYLGLHYPATDIPQAARFLFMKNKVRMICDCRARSIKIIEDESLHLDISLCGSTLRAPHS 323
Query: 320 CHARYMENMGSIASLVMSVTINEAE--DELDND----QEQGRKLWGLVVCHHTSPRFVPF 373
CH +YMENM SIASLVM+V +NE E DE+ D Q++ +KLWGL+VCHH SPR+VPF
Sbjct: 324 CHLQYMENMNSIASLVMAVVVNENEDDDEVGADQPAQQQKRKKLWGLLVCHHESPRYVPF 383
Query: 374 PLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD-SPVGIVTQTPNVM 432
PLRYACEFL QVF V VNKE EL Q+REK ILR QT+L DMLLR+ SP+ IV+ TPN+M
Sbjct: 384 PLRYACEFLAQVFAVHVNKEFELERQVREKSILRMQTMLSDMLLRESSPLSIVSGTPNIM 443
Query: 433 DLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALA 492
DLVKCDGAAL Y GK+W L PTE QI+DIA WL + HR STGLSTDSL +AGYPGA A
Sbjct: 444 DLVKCDGAALLYGGKVWRLQNAPTESQIRDIAFWLSDVHRDSTGLSTDSLHDAGYPGAAA 503
Query: 493 LGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEV 552
LGD +CG+A KI SKD LFWFRSHTA EI+WGGAKHD KD R+MHPR SFKAFLEV
Sbjct: 504 LGDMICGMAVAKINSKDILFWFRSHTAAEIRWGGAKHDPSDKDDSRRMHPRLSFKAFLEV 563
Query: 553 VKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNE 612
VK +SLPW D EMDAIHSLQLILRG+L D++ ++ D +++ + EL+ +T+E
Sbjct: 564 VKMKSLPWNDYEMDAIHSLQLILRGTLNDDIKPTRAASLDNQVGDLKLDGLAELQAVTSE 623
Query: 613 MVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
MVRL+ETA VPILAVD++G VNGWN K AELTGL VD+AIG
Sbjct: 624 MVRLMETATVPILAVDSNGLVNGWNQKVAELTGLRVDEAIG 664
>gi|363547659|gb|AEW26872.1| phytochrome P [Dioon merolae]
Length = 590
Score = 842 bits (2174), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/601 (67%), Positives = 485/601 (80%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV++ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT + A
Sbjct: 2 IQPFGCMLAVEKGTFRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPASAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H K+SGK FYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHGKSSGKAFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEP LG HYPATDIPQASRFL M+N+VRMICDC A PV+V+Q +L QPL L GSTLRA
Sbjct: 179 DLEPCLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVVQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVVN-----------GNMKLWGLVVCHHTSPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W LGVTP E QIKDIA+WLLE H TGLSTDSL EAGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWALGVTPPEAQIKDIADWLLECHADWTGLSTDSLAEAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA KIT+KDFLFWFRSHTAKEIKWGGAKH +D GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAAKITAKDFLFWFRSHTAKEIKWGGAKHHPDDRDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL I +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDTETKTMIHARLNDLRVQGMDELSSIASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A G +LV DLV +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEATGKSLVCDLVYEESMETVERLLCHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|363547558|gb|AEW26822.1| phytochrome P [Cycas maconochiei]
Length = 589
Score = 842 bits (2174), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/601 (67%), Positives = 483/601 (80%), Gaps = 16/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S K A +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKPAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASR L M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRSLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFPLR
Sbjct: 239 AHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPFGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFK FLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKVFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 F 676
Sbjct: 587 L 587
>gi|363547509|gb|AEW26798.1| phytochrome P [Cycas beddomei]
Length = 589
Score = 842 bits (2174), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/601 (67%), Positives = 484/601 (80%), Gaps = 16/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
QPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 FQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HR+DVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAVAQEISLMNPIWMRSRSSGKPFYAIVHRVDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A VKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATLVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
HGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 VHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKH+LRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHMLRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFK FLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKVFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 F 676
Sbjct: 587 L 587
>gi|363547840|gb|AEW26960.1| phytochrome P [Zamia furfuracea]
Length = 590
Score = 841 bits (2173), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/601 (66%), Positives = 486/601 (80%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQP GCM+AV+E+ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT + A
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERE-LLTIGTDVRTLFTPASAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NP+ + K+SGKPFYAILHRIDVG+VID EPV ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPVWMQSKSSGKPFYAILHRIDVGMVIDFEPVG--GAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYP TDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPTTDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGS+ASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMN-----------VNMKLWGLVVCHHTSPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E +L+AQL EKHIL+TQT+LC+MLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMESQLAAQLTEKHILKTQTLLCNMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTPTE QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
CG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 ACGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLTDLRLQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAV++ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVNSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|363547874|gb|AEW26977.1| phytochrome P [Zamia poeppigiana]
Length = 590
Score = 840 bits (2171), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/601 (66%), Positives = 486/601 (80%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQP GCM+AV+E+ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT + A
Sbjct: 2 IQPLGCMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERE-LLTIGTDVRTLFTPASAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NP+ +H K+SGKPFYAILHRIDVG+VID EPV ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPVWMHSKSSGKPFYAILHRIDVGMVIDFEPVG--GAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L Q L L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQLLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGS+ASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMN-----------VNMKLWGLVVCHHTSPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLL D+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLLDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTPTE QIKDIA+WLLE H TGLSTDSL +A YPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADARYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD +K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSKTKTMIHSRLTDLRLQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|422898335|dbj|BAM67033.1| phytochrome b [Chrysanthemum seticuspe f. boreale]
Length = 1130
Score = 840 bits (2169), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/661 (60%), Positives = 502/661 (75%), Gaps = 9/661 (1%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSN-VPSSTVSAYLQRVQRGRL 76
++ AQ ++DA+L +++S FDYS S+ S++ + + ++AYL ++QRG
Sbjct: 36 SKAIAQYAVDARLHAVYEQSGGSGKSFDYSQSIKTSATNDDSIAEQQMTAYLSKIQRGGH 95
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCMIA+D F V+ +SENA E L LAP +VP++E+ + LT+G DV+TLF +S
Sbjct: 96 IQPFGCMIAIDNVTFKVIAFSENARERLGLAPQSVPSLEKPEILTIGTDVKTLFMNSSVL 155
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
L+ A E+ L NP L+ K SGKPFYAILHRIDVG+VIDLEPV +D ++ AG+++
Sbjct: 156 KLEHAFRAREITLSNPHLVQSKNSGKPFYAILHRIDVGIVIDLEPVRTEDPGISGAGSVQ 215
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AIS++Q+LP G+I LLCD +V V +LTGYDRVMVYKFHEDEHGEVVAE +R
Sbjct: 216 SQKLAVRAISKVQALPGGDIKLLCDTVVQNVRELTGYDRVMVYKFHEDEHGEVVAESKRA 275
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DL+PY+G HYPATDIPQASRFL +N+VRMI DC A PV+V+QD L QPL L GSTLRA
Sbjct: 276 DLDPYIGLHYPATDIPQASRFLFRQNRVRMIVDCYANPVRVVQDDALMQPLCLVGSTLRA 335
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGS ASL ++V IN ED G LWGLVVCHHTS R +PFPLR
Sbjct: 336 PHGCHAQYMANMGSRASLALAVIINGNEDGAGGRGTMG--LWGLVVCHHTSARCIPFPLR 393
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
+ACEFL+Q FG+Q+N E++L++Q+ EK ILRTQT+LCDMLLRDSP GIVTQ+P++MDLVK
Sbjct: 394 HACEFLMQAFGLQLNLELQLASQMSEKRILRTQTLLCDMLLRDSPTGIVTQSPSIMDLVK 453
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY+GK + +G+TPTE QIKDI +WLL H STGLSTDSL +AGYPGA LGDA
Sbjct: 454 CDGAALYYQGKYYPIGITPTESQIKDIVDWLLACHTDSTGLSTDSLADAGYPGAATLGDA 513
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+A ITSKDFLFWFRSHTAKEIKWGGAKH KD G++MHPRSSF AFLEVVK R
Sbjct: 514 VCGMAVAYITSKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFNAFLEVVKSR 573
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+ EMDAIHSLQLILR S +D +SK ++ V + ++ +DEL + EMVRL
Sbjct: 574 SLPWENSEMDAIHSLQLILRDSFKDSDESNSKAVIKVQIDEMGLQGMDELSSVAREMVRL 633
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PI AVD G +NGWN+K AELTGL+V++A+G +LV DL+ +S + V +L +A
Sbjct: 634 IETATAPIFAVDVEGRINGWNAKIAELTGLSVNEAMGKSLVQDLIYKESEETVVKLLQNA 693
Query: 676 F 676
Sbjct: 694 I 694
>gi|115454991|ref|NP_001051096.1| Os03g0719800 [Oryza sativa Japonica Group]
gi|122246800|sp|Q10DU0.1|PHYA_ORYSJ RecName: Full=Phytochrome A
gi|158513187|sp|A2XLG5.2|PHYA_ORYSI RecName: Full=Phytochrome A
gi|21321786|gb|AAM47309.1|AF377946_11 phytochrome A [Oryza sativa Japonica Group]
gi|30578176|dbj|BAC76431.1| phytochrome A [Oryza sativa Japonica Group]
gi|50540697|gb|AAT77854.1| phytochrome [Oryza sativa Japonica Group]
gi|108710785|gb|ABF98580.1| Phytochrome A, putative, expressed [Oryza sativa Japonica Group]
gi|113549567|dbj|BAF13010.1| Os03g0719800 [Oryza sativa Japonica Group]
gi|125587730|gb|EAZ28394.1| hypothetical protein OsJ_12374 [Oryza sativa Japonica Group]
gi|215704150|dbj|BAG92990.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 1128
Score = 839 bits (2168), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/641 (63%), Positives = 489/641 (76%), Gaps = 12/641 (1%)
Query: 25 VAAQTSIDAKLAEDFDE--SDFDYSTSVNISSST---SNVPSSTVSAYLQRVQRGRLIQP 79
+ AQT++DA+L +++E FDYS V +T S V AYL +QR +LIQP
Sbjct: 24 ILAQTTLDAELNAEYEEYGDSFDYSKLVEAQRTTGPEQQARSEKVIAYLHHIQRAKLIQP 83
Query: 80 FGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQ 139
FGC++A+DE+ F V+ SENAPEML HAVP+++ L +G +V +LFT GA ALQ
Sbjct: 84 FGCLLALDEKTFNVIALSENAPEMLTTVSHAVPSVDDPPKLRIGTNVWSLFTDPGATALQ 143
Query: 140 KAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYK 199
KA F +V+LLNPIL+ CKTSGKPFYAI+HR LV+D EPV P + P TAAGAL+SYK
Sbjct: 144 KALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQSYK 203
Query: 200 LAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLE 259
LAAKAIS++QSLP G++ +LC+ +V E+ DLTGYDRVM YKFHED+HGEV AE +P LE
Sbjct: 204 LAAKAISKIQSLPGGSMEVLCNTVVKELFDLTGYDRVMAYKFHEDDHGEVFAEITKPGLE 263
Query: 260 PYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHG 319
PYLG HYPATDIPQA+RFL MKNKVRMICDC A +K+I+D+ L +SLCGSTLRAPH
Sbjct: 264 PYLGLHYPATDIPQAARFLFMKNKVRMICDCRARSIKIIEDESLHLDISLCGSTLRAPHS 323
Query: 320 CHARYMENMGSIASLVMSVTINEAE--DELDND----QEQGRKLWGLVVCHHTSPRFVPF 373
CH +YMENM SIASLVM+V +NE E DE+ D Q++ +KLWGL+VCHH SPR+VPF
Sbjct: 324 CHLQYMENMNSIASLVMAVVVNENEDDDEVGADQPAQQQKRKKLWGLLVCHHESPRYVPF 383
Query: 374 PLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD-SPVGIVTQTPNVM 432
PLRYACEFL QVF V VNKE EL Q+REK ILR QT+L DMLLR+ SP+ IV+ TPN+M
Sbjct: 384 PLRYACEFLAQVFAVHVNKEFELERQVREKSILRMQTMLSDMLLRESSPLSIVSGTPNIM 443
Query: 433 DLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALA 492
DLVKCDGAAL Y GK+W L PTE QI+DIA WL + HR STGLSTDSL +AGYPGA A
Sbjct: 444 DLVKCDGAALLYGGKVWRLQNAPTESQIRDIAFWLSDVHRDSTGLSTDSLHDAGYPGAAA 503
Query: 493 LGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEV 552
LGD +CG+A KI SKD LFWFRSHTA EI+WGGAKHD KD R+MHPR SFKAFLEV
Sbjct: 504 LGDMICGMAVAKINSKDILFWFRSHTAAEIRWGGAKHDPSDKDDSRRMHPRLSFKAFLEV 563
Query: 553 VKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNE 612
VK +SLPW D EMDAIHSLQLILRG+L D++ ++ D +++ + EL+ +T+E
Sbjct: 564 VKMKSLPWNDYEMDAIHSLQLILRGTLNDDIKPTRAASLDNQVGDLKLDGLAELQAVTSE 623
Query: 613 MVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
MVRL+ETA VPILAVD++G VNGWN K AELTGL VD+AIG
Sbjct: 624 MVRLMETATVPILAVDSNGLVNGWNQKVAELTGLRVDEAIG 664
>gi|124359940|gb|ABN07956.1| GAF; Heavy metal sensor kinase [Medicago truncatula]
Length = 1152
Score = 839 bits (2168), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/670 (60%), Positives = 507/670 (75%), Gaps = 13/670 (1%)
Query: 20 KQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSS--TSNVPSSTVSAYLQRVQRGR 75
K + AQ + DA+L F++S FDYS S+ ++++ + +VP ++AYL ++QRG
Sbjct: 42 KSMKKAIAQYTEDARLHAVFEQSGDSFDYSQSIRLTTAAHSQSVPEQQITAYLAKIQRGG 101
Query: 76 LIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD-----ALTLGIDVRTLF 130
IQPFG MIAVDE +F VL YSENA +ML + P +VP++E D +G DVR+LF
Sbjct: 102 FIQPFGSMIAVDEPSFRVLAYSENARDMLGITPQSVPSLEDDDESSSSGFNIGTDVRSLF 161
Query: 131 TSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVT 190
T S L+KA E++L+NPI IH +++GKPFY ILHRIDVG+VIDLEP +D ++
Sbjct: 162 THSSGVLLEKAFAAREISLMNPIWIHSRSTGKPFYGILHRIDVGVVIDLEPARSEDPALS 221
Query: 191 AAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVV 250
AGA++S KLA +AIS+LQSLP G++ +LCD +V V +LTGYDRVMVYKFHEDEHGEVV
Sbjct: 222 IAGAVQSQKLAVRAISQLQSLPGGDVKVLCDAVVESVRELTGYDRVMVYKFHEDEHGEVV 281
Query: 251 AECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLC 310
AE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+V QD+ L QP+ L
Sbjct: 282 AESKRIDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNASPVRVFQDEALVQPVCLV 341
Query: 311 GSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR---KLWGLVVCHHTS 367
GSTLRAPHGCHA+YM NMGSIASL M+V IN +++ GR +LWGLVVCHHTS
Sbjct: 342 GSTLRAPHGCHAQYMANMGSIASLAMAVIINGNDEDGVGIGGTGRNSMRLWGLVVCHHTS 401
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
R +PFPLRYACEFL+Q FG+Q+N E++L+AQ EK +LRTQT+LCDMLLRDSP GIVTQ
Sbjct: 402 ARCIPFPLRYACEFLMQAFGLQLNMELQLAAQSLEKRVLRTQTLLCDMLLRDSPTGIVTQ 461
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKC+GAAL+Y+G + LGVTPTE QI+DI EWLL +H STGLSTDSL +AGY
Sbjct: 462 SPSIMDLVKCNGAALFYQGNYYPLGVTPTESQIRDIIEWLLAFHGDSTGLSTDSLADAGY 521
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGA +LGDAVCG+A IT KDFLFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 522 PGAASLGDAVCGMAVAYITEKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 581
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELR 607
AFLEVVK RS+ W++ EMDAIHSLQLILR S ++ DSK +V+ + ++ +DEL
Sbjct: 582 AFLEVVKSRSMQWDNAEMDAIHSLQLILRDSFKEAENNDSKAVVHTHMAELELQGVDELS 641
Query: 608 IITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVD 666
+ EMVRLIETA PI AVD +G +NGWN+K +ELTGL V+ A+G +L+ DLV +S +
Sbjct: 642 SVAREMVRLIETATAPIFAVDVNGRINGWNAKVSELTGLLVEDAMGKSLLHDLVYKESQE 701
Query: 667 VVKNMLSSAF 676
V +LS A
Sbjct: 702 TVDKLLSHAL 711
>gi|363547748|gb|AEW26916.1| phytochrome P [Encephalartos schaijesii]
gi|363547750|gb|AEW26917.1| phytochrome P [Encephalartos schmitzii]
Length = 590
Score = 839 bits (2168), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/601 (67%), Positives = 486/601 (80%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D + AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAATSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM +MGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMASMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYP A +LGDA
Sbjct: 348 CDGAALYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD R+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDDRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|130186|sp|P19862.1|PHYA1_MAIZE RecName: Full=Phytochrome A
gi|29293912|gb|AAO73469.1| phytochrome A2 [Zea mays]
gi|129560387|gb|ABO30572.1| phytochrome A2 [Zea mays]
gi|413933241|gb|AFW67792.1| phytochrome A [Zea mays]
Length = 1131
Score = 839 bits (2168), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/664 (62%), Positives = 499/664 (75%), Gaps = 12/664 (1%)
Query: 25 VAAQTSIDAKLAEDFDES--DFDYSTSVNISSST---SNVPSSTVSAYLQRVQRGRLIQP 79
+ AQT++DA+L +++ES FDYS V ST S V AYLQ +QRG+LIQP
Sbjct: 24 ILAQTTLDAELNAEYEESGDSFDYSKLVEAQRSTPPEQQGRSGKVIAYLQHIQRGKLIQP 83
Query: 80 FGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQ 139
FGC++A+DE++F V+ +SENAPEML HAVPN++ L +G +VR+LFT GA ALQ
Sbjct: 84 FGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLGIGTNVRSLFTDPGATALQ 143
Query: 140 KAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYK 199
KA F +V+LLNPIL+ CKTSGKPFYAI+HR LV+D EPV P + P TAAGAL+SYK
Sbjct: 144 KALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQSYK 203
Query: 200 LAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLE 259
LAAKAIS++QSLP G++ LC+ +V EV DLTGYDRVM YKFHEDEHGEV AE +P +E
Sbjct: 204 LAAKAISKIQSLPGGSMEALCNTVVKEVFDLTGYDRVMAYKFHEDEHGEVFAEITKPGIE 263
Query: 260 PYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHG 319
PY+G HYPATDIPQA+RFL MKNKVRMICDC A VK+I+D+ L +SLCGSTLRAPH
Sbjct: 264 PYIGLHYPATDIPQAARFLFMKNKVRMICDCRARSVKIIEDEALSIDISLCGSTLRAPHS 323
Query: 320 CHARYMENMGSIASLVMSVTI------NEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPF 373
CH +YMENM SIASLVM+V + +E E E Q++ ++LWGL+VCHH SPR+VPF
Sbjct: 324 CHLKYMENMNSIASLVMAVVVNENEEDDEPEPEQPPQQQKKKRLWGLIVCHHESPRYVPF 383
Query: 374 PLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD-SPVGIVTQTPNVM 432
PLRYACEFL QVF V VNKE EL Q+REK+ILR QT+L DML ++ SP+ IV+ +PN+M
Sbjct: 384 PLRYACEFLAQVFAVHVNKEFELEKQIREKNILRMQTMLSDMLFKESSPLSIVSGSPNIM 443
Query: 433 DLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALA 492
DLVKCDGAAL Y K+W L PTE QI+DIA WL E H STGLSTDSL +AGYPGA +
Sbjct: 444 DLVKCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEVHGDSTGLSTDSLQDAGYPGAAS 503
Query: 493 LGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEV 552
LGD +CG+A KITSKD LFWFRSHTA EIKWGGAKHD KD R+MHPR SFKAFLEV
Sbjct: 504 LGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHDPSDKDDNRRMHPRLSFKAFLEV 563
Query: 553 VKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNE 612
VK +SLPW D EMDAIHSLQLILRG+L D ++ D +++ + EL+ +T+E
Sbjct: 564 VKTKSLPWSDYEMDAIHSLQLILRGTLNDASKPAQASGLDNQIGDLKLDGLAELQAVTSE 623
Query: 613 MVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNML 672
MVRL+ETA VPILAVD +G VNGWN K AEL+GL VD+AIG ++ LV SV +V+ ML
Sbjct: 624 MVRLMETATVPILAVDGNGLVNGWNQKVAELSGLRVDEAIGRHILTLVEDSSVSLVQRML 683
Query: 673 SSAF 676
A
Sbjct: 684 YLAL 687
>gi|33333478|gb|AAQ11872.1| phytochrome B [Stellaria longipes]
Length = 1128
Score = 839 bits (2167), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/687 (60%), Positives = 513/687 (74%), Gaps = 14/687 (2%)
Query: 2 SSKSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSST 56
S ++TN + +S+ S +R AQ +IDA+L F++S FDYS SV +S
Sbjct: 3 SRNEGSRTNNNNNSNNPSDTMSRAIAQYTIDARLHAVFEQSGESGKSFDYSQSVKTYTSA 62
Query: 57 SNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDL----APHAVP 112
+VP ++AYL ++QRG LIQPFGCM+A+D+ + ++ YS+N+ E+L AVP
Sbjct: 63 ESVPEQQITAYLSKIQRGGLIQPFGCMLAIDDLTYRIIAYSQNSVELLGFITTTTTTAVP 122
Query: 113 NIE--QQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHR 170
++E QQ + +G D+R+LF SS L+KA + E+ LLNP+ IH K +GKPFYAILHR
Sbjct: 123 SLEAVQQRIIAVGTDIRSLFMSSSCVLLEKAFSAREITLLNPVWIHSKANGKPFYAILHR 182
Query: 171 IDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDL 230
IDVG+VIDLEP +D ++ AGA++S KLA +AIS+LQSLP G++ LLCD +V V L
Sbjct: 183 IDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDVKLLCDTVVESVRQL 242
Query: 231 TGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDC 290
YDRVMVYKFHEDEHGEVVAE +R DLEPYLG HYPATDIPQASRFL +N+VRMI DC
Sbjct: 243 AAYDRVMVYKFHEDEHGEVVAESKRADLEPYLGLHYPATDIPQASRFLFKQNRVRMIVDC 302
Query: 291 LAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDND 350
A V V+QD++L QPL L GSTLRAPHGCH++YM NMGSIASLVM+V IN +DE
Sbjct: 303 HADSVSVVQDERLRQPLCLVGSTLRAPHGCHSQYMANMGSIASLVMAVIINGNDDE--GS 360
Query: 351 QEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQT 410
+LWGLVVCHHTSPR +PFPLRYACEFL+Q FG+Q+N E++LSAQ+ EK +LRTQT
Sbjct: 361 TRNAMRLWGLVVCHHTSPRSIPFPLRYACEFLMQAFGLQLNMELQLSAQVLEKRVLRTQT 420
Query: 411 VLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEY 470
+LCDM+LR+SP GIVTQ+P++MDLVKCDGAAL + GK + LGVTPTE Q+KDI +WLL
Sbjct: 421 LLCDMILRESPTGIVTQSPSIMDLVKCDGAALLFCGKYYPLGVTPTELQLKDIVQWLLSN 480
Query: 471 HRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHD 530
H STGLSTDSL +AGYPGALAL DAVCG+A IT DFLFWFRSH AKEIKWGGAKH
Sbjct: 481 HGDSTGLSTDSLADAGYPGALALADAVCGMAVAFITRSDFLFWFRSHPAKEIKWGGAKHH 540
Query: 531 SGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMI 590
KD ++M+PRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +DE SK I
Sbjct: 541 PEDKDDVQRMNPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFKDEETTHSKAI 600
Query: 591 VNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQ 650
V+ + D ++ IDEL + EMVRLIETA PI AVDA G +NGWN+KA+EL GL+V++
Sbjct: 601 VHDQAGDVAMQGIDELSSVAKEMVRLIETAMAPIFAVDADGCINGWNAKASELIGLSVEE 660
Query: 651 AIGTALV-DLVAGDSVDVVKNMLSSAF 676
A+G +LV DLV DS +V + +L A
Sbjct: 661 AMGKSLVHDLVCEDSKNVTQELLLHAL 687
>gi|293335473|ref|NP_001169810.1| uncharacterized protein LOC100383702 [Zea mays]
gi|37926866|gb|AAP06788.1| phytochrome B1 apoprotein [Zea mays]
Length = 1161
Score = 839 bits (2167), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/689 (60%), Positives = 518/689 (75%), Gaps = 27/689 (3%)
Query: 9 TNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSST 63
T+ + +A ++ ++ AQ ++DA+L F++S FDYS S+ + S+
Sbjct: 37 TSRAGGGAAATESVSKAVAQYTLDARLHAVFEQSGASGRSFDYSQSLRAPPTPSS--EQQ 94
Query: 64 VSAYLQRVQRGRLIQPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA-- 119
++AYL R+QRG IQPFGC +AV D+ +F +L +SEN+P++LDL+PH +VP+++
Sbjct: 95 IAAYLSRIQRGGHIQPFGCTLAVADDSSFRLLAFSENSPDLLDLSPHHSVPSLDSSAPPH 154
Query: 120 LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDL 179
++LG D R LF+ S A L++A E++LLNPI IH + S KPFYAILHRIDVG+VIDL
Sbjct: 155 VSLGADARLLFSPSSAVLLERAFAAREISLLNPIWIHSRVSSKPFYAILHRIDVGVVIDL 214
Query: 180 EPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVY 239
EP +D ++ AGA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY
Sbjct: 215 EPARTEDPALSIAGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVY 274
Query: 240 KFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQ 299
+FHEDEHGEVVAE RR +LEPYLG HYPATDIPQASRFL +N+VRMI DC A PV+VIQ
Sbjct: 275 RFHEDEHGEVVAESRRDNLEPYLGLHYPATDIPQASRFLFRQNRVRMIADCHATPVRVIQ 334
Query: 300 DKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR---- 355
D L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V I+ D D++ GR
Sbjct: 335 DPGLSQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIISSGGD----DEQTGRGGIS 390
Query: 356 ---KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
KLWGLVVCHHTSPR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+L
Sbjct: 391 SAMKLWGLVVCHHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLL 450
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDMLLRDSP GIVTQ+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL +H
Sbjct: 451 CDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTESQIKDIIEWLTVFHG 510
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AGY GA ALG+AVCG+A IT D+LFWFRSHTAKEIKWGGAKH
Sbjct: 511 DSTGLSTDSLADAGYLGAAALGEAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPE 570
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMI 590
KD G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK I
Sbjct: 571 DKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAAEGTNNSKAI 630
Query: 591 VN--VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTV 648
VN V + + I+EL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V
Sbjct: 631 VNGQVQLRELELRGINELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKIAELTGLSV 690
Query: 649 DQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
++A+G +LV DL+ +S V+ +LS A
Sbjct: 691 EEAMGKSLVNDLIFKESEATVEKLLSRAL 719
>gi|414866482|tpg|DAA45039.1| TPA: phytochromeB1 [Zea mays]
Length = 1161
Score = 839 bits (2167), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/689 (60%), Positives = 518/689 (75%), Gaps = 27/689 (3%)
Query: 9 TNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSST 63
T+ + +A ++ ++ AQ ++DA+L F++S FDYS S+ + S+
Sbjct: 37 TSRAGGGAAATESVSKAVAQYTLDARLHAVFEQSGASGRSFDYSQSLRAPPTPSS--EQQ 94
Query: 64 VSAYLQRVQRGRLIQPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA-- 119
++AYL R+QRG IQPFGC +AV D+ +F +L +SEN+P++LDL+PH +VP+++
Sbjct: 95 IAAYLSRIQRGGHIQPFGCTLAVADDSSFRLLAFSENSPDLLDLSPHHSVPSLDSSAPPH 154
Query: 120 LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDL 179
++LG D R LF+ S A L++A E++LLNPI IH + S KPFYAILHRIDVG+VIDL
Sbjct: 155 VSLGADARLLFSPSSAVLLERAFAAREISLLNPIWIHSRVSSKPFYAILHRIDVGVVIDL 214
Query: 180 EPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVY 239
EP +D ++ AGA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY
Sbjct: 215 EPARTEDPALSIAGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVY 274
Query: 240 KFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQ 299
+FHEDEHGEVVAE RR +LEPYLG HYPATDIPQASRFL +N+VRMI DC A PV+VIQ
Sbjct: 275 RFHEDEHGEVVAESRRDNLEPYLGLHYPATDIPQASRFLFRQNRVRMIADCHATPVRVIQ 334
Query: 300 DKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR---- 355
D L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V I+ D D++ GR
Sbjct: 335 DPGLSQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIISSGGD----DEQTGRGGIS 390
Query: 356 ---KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
KLWGLVVCHHTSPR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+L
Sbjct: 391 SAMKLWGLVVCHHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLL 450
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDMLLRDSP GIVTQ+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL +H
Sbjct: 451 CDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTESQIKDIIEWLTVFHG 510
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AGY GA ALG+AVCG+A IT D+LFWFRSHTAKEIKWGGAKH
Sbjct: 511 DSTGLSTDSLADAGYLGAAALGEAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPE 570
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMI 590
KD G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK I
Sbjct: 571 DKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAAEGTNNSKAI 630
Query: 591 VN--VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTV 648
VN V + + I+EL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V
Sbjct: 631 VNGQVQLRELELRGINELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKIAELTGLSV 690
Query: 649 DQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
++A+G +LV DL+ +S V+ +LS A
Sbjct: 691 EEAMGKSLVNDLIFKESEATVEKLLSRAL 719
>gi|357448917|ref|XP_003594734.1| Phytochrome b1 [Medicago truncatula]
gi|355483782|gb|AES64985.1| Phytochrome b1 [Medicago truncatula]
Length = 1198
Score = 839 bits (2167), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/670 (60%), Positives = 507/670 (75%), Gaps = 13/670 (1%)
Query: 20 KQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSS--TSNVPSSTVSAYLQRVQRGR 75
K + AQ + DA+L F++S FDYS S+ ++++ + +VP ++AYL ++QRG
Sbjct: 42 KSMKKAIAQYTEDARLHAVFEQSGDSFDYSQSIRLTTAAHSQSVPEQQITAYLAKIQRGG 101
Query: 76 LIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD-----ALTLGIDVRTLF 130
IQPFG MIAVDE +F VL YSENA +ML + P +VP++E D +G DVR+LF
Sbjct: 102 FIQPFGSMIAVDEPSFRVLAYSENARDMLGITPQSVPSLEDDDESSSSGFNIGTDVRSLF 161
Query: 131 TSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVT 190
T S L+KA E++L+NPI IH +++GKPFY ILHRIDVG+VIDLEP +D ++
Sbjct: 162 THSSGVLLEKAFAAREISLMNPIWIHSRSTGKPFYGILHRIDVGVVIDLEPARSEDPALS 221
Query: 191 AAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVV 250
AGA++S KLA +AIS+LQSLP G++ +LCD +V V +LTGYDRVMVYKFHEDEHGEVV
Sbjct: 222 IAGAVQSQKLAVRAISQLQSLPGGDVKVLCDAVVESVRELTGYDRVMVYKFHEDEHGEVV 281
Query: 251 AECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLC 310
AE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+V QD+ L QP+ L
Sbjct: 282 AESKRIDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNASPVRVFQDEALVQPVCLV 341
Query: 311 GSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR---KLWGLVVCHHTS 367
GSTLRAPHGCHA+YM NMGSIASL M+V IN +++ GR +LWGLVVCHHTS
Sbjct: 342 GSTLRAPHGCHAQYMANMGSIASLAMAVIINGNDEDGVGIGGTGRNSMRLWGLVVCHHTS 401
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
R +PFPLRYACEFL+Q FG+Q+N E++L+AQ EK +LRTQT+LCDMLLRDSP GIVTQ
Sbjct: 402 ARCIPFPLRYACEFLMQAFGLQLNMELQLAAQSLEKRVLRTQTLLCDMLLRDSPTGIVTQ 461
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKC+GAAL+Y+G + LGVTPTE QI+DI EWLL +H STGLSTDSL +AGY
Sbjct: 462 SPSIMDLVKCNGAALFYQGNYYPLGVTPTESQIRDIIEWLLAFHGDSTGLSTDSLADAGY 521
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGA +LGDAVCG+A IT KDFLFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 522 PGAASLGDAVCGMAVAYITEKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 581
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELR 607
AFLEVVK RS+ W++ EMDAIHSLQLILR S ++ DSK +V+ + ++ +DEL
Sbjct: 582 AFLEVVKSRSMQWDNAEMDAIHSLQLILRDSFKEAENNDSKAVVHTHMAELELQGVDELS 641
Query: 608 IITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVD 666
+ EMVRLIETA PI AVD +G +NGWN+K +ELTGL V+ A+G +L+ DLV +S +
Sbjct: 642 SVAREMVRLIETATAPIFAVDVNGRINGWNAKVSELTGLLVEDAMGKSLLHDLVYKESQE 701
Query: 667 VVKNMLSSAF 676
V +LS A
Sbjct: 702 TVDKLLSHAL 711
>gi|363547675|gb|AEW26880.1| phytochrome P [Encephalartos barteri]
gi|363547727|gb|AEW26906.1| phytochrome P [Encephalartos macrostrobilus]
Length = 590
Score = 838 bits (2166), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/601 (67%), Positives = 485/601 (80%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D + AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAATSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM +MGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMASMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYP A +LGDA
Sbjct: 348 CDGAALYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD R+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDDRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A G +LV DLV +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEATGKSLVCDLVYEESMETVERLLHHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|83699543|gb|ABC40685.1| phytochrome B1 [Zea mays]
Length = 783
Score = 838 bits (2166), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/689 (60%), Positives = 518/689 (75%), Gaps = 27/689 (3%)
Query: 9 TNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSST 63
T+ + +A ++ ++ AQ ++DA+L F++S FDYS S+ + S+
Sbjct: 37 TSRAGGGAAATESVSKAVAQYTLDARLHAVFEQSGASGRSFDYSQSLRAPPTPSS--EQQ 94
Query: 64 VSAYLQRVQRGRLIQPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA-- 119
++AYL R+QRG IQPFGC +AV D+ +F +L +SEN+P++LDL+PH +VP+++
Sbjct: 95 IAAYLSRIQRGGHIQPFGCTLAVADDSSFRLLAFSENSPDLLDLSPHHSVPSLDSSAPPH 154
Query: 120 LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDL 179
++LG D R LF+ S A L++A E++LLNPI IH + S KPFYAILHRIDVG+VIDL
Sbjct: 155 VSLGADARLLFSPSSAVLLERAFAAREISLLNPIWIHSRVSSKPFYAILHRIDVGVVIDL 214
Query: 180 EPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVY 239
EP +D ++ AGA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY
Sbjct: 215 EPARTEDPALSIAGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVY 274
Query: 240 KFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQ 299
+FHEDEHGEVVAE RR +LEPYLG HYPATDIPQASRFL +N+VRMI DC A PV+VIQ
Sbjct: 275 RFHEDEHGEVVAESRRDNLEPYLGLHYPATDIPQASRFLFRQNRVRMIADCHATPVRVIQ 334
Query: 300 DKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR---- 355
D L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V I+ D D++ GR
Sbjct: 335 DPGLSQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIISSGGD----DEQTGRGGIS 390
Query: 356 ---KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
KLWGLVVCHHTSPR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+L
Sbjct: 391 SAMKLWGLVVCHHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLL 450
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDMLLRDSP GIVTQ+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL +H
Sbjct: 451 CDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYHGKYYPLGVTPTESQIKDIIEWLTVFHG 510
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AGY GA ALG+AVCG+A IT D+LFWFRSHTAKEIKWGGAKH
Sbjct: 511 DSTGLSTDSLADAGYLGAAALGEAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPE 570
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMI 590
KD G++MHPRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK I
Sbjct: 571 DKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAAEGTNNSKAI 630
Query: 591 VN--VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTV 648
VN V + + I+EL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V
Sbjct: 631 VNGQVQLRELELRGINELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKIAELTGLSV 690
Query: 649 DQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
++A+G +LV DL+ +S V+ +LS A
Sbjct: 691 EEAMGKSLVNDLIFKESEATVEKLLSRAL 719
>gi|363547627|gb|AEW26856.1| phytochrome P [Bowenia serrulata]
Length = 590
Score = 838 bits (2166), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/601 (66%), Positives = 481/601 (80%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGC++AV+E+ F ++ YSENA MLDLAP +VP +E++ L +G DVRTLFT+S A
Sbjct: 2 IQPFGCVLAVEERTFRIVAYSENAVGMLDLAPQSVPTMERE-LLAIGTDVRTLFTASSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E+ L+NP+ +H ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAAAQEIGLMNPVWMHSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+V IN KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+QVN E++L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P+ MDLVK
Sbjct: 288 YACEFLMQAFGLQVNMELQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSTMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY GK W+LGV P E QIKDIA WLLE H TGLSTDSL +AGYP A +LGDA
Sbjct: 348 CDGAALYYGGKAWVLGVAPAEAQIKDIAAWLLECHADWTGLSTDSLADAGYPAAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKE KWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKETKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+ EMDAIHSLQLILRG +D ++K I++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENAEMDAIHSLQLILRGPFEDINDSETKTIIHSRLNDLRLQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLRHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|363547531|gb|AEW26809.1| phytochrome P [Cycas condaoensis]
Length = 589
Score = 838 bits (2166), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/601 (68%), Positives = 488/601 (81%), Gaps = 16/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCH++YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+R
Sbjct: 239 PHGCHSQYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSARAIPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRR 466
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRL
Sbjct: 467 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRL 526
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V++A+G +LV DLV +SV+ V+ +L A
Sbjct: 527 IETATAPILAVDSGGIVNGWNAKVAELTGLPVEEAMGMSLVHDLVYEESVETVERLLYHA 586
Query: 676 F 676
Sbjct: 587 L 587
>gi|57281883|emb|CAC85512.1| phytochrome A [Triticum aestivum]
Length = 1130
Score = 837 bits (2163), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/672 (61%), Positives = 500/672 (74%), Gaps = 13/672 (1%)
Query: 18 RSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNISSSTSNV----PSSTVSAYLQRV 71
R RV AQT++DA+L +F+ES FDYS V T V S V AYLQ +
Sbjct: 15 RQSTQERVLAQTTLDAELNAEFEESSDSFDYSKLVEAQRDTPTVLQEGRSEKVIAYLQHI 74
Query: 72 QRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFT 131
QRG++IQ FGC++A+DE++F V+ +SENAPEML HAVP+++ L +G +VR+LFT
Sbjct: 75 QRGKMIQSFGCLLALDEKSFNVIAFSENAPEMLTTVSHAVPSVDDPPRLDIGTNVRSLFT 134
Query: 132 SSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTA 191
GAAAL KA F +V+LLNPIL+ CKTSGKPFYAI+HR LV+D EPVNP + P TA
Sbjct: 135 DQGAAALHKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVNPTEFPATA 194
Query: 192 AGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVA 251
AGAL+SYKLAAKAIS++Q+LP G++ LLC+ +V EV DLTGYDRVM YKFHED HGEV A
Sbjct: 195 AGALQSYKLAAKAISKIQALPGGSMELLCNTVVKEVFDLTGYDRVMAYKFHEDNHGEVFA 254
Query: 252 ECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCG 311
E +P LEPYLG HYPATDIPQA+RFL MKNKVR+ICD A P+KVI+D+ L +SLCG
Sbjct: 255 EITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRLICDVRARPIKVIEDEALPFDISLCG 314
Query: 312 STLRAPHGCHARYMENMGSIASLVMSVTINEAE--DELDND---QEQGRK-LWGLVVCHH 365
S LRA H CH +YMENM SIASLVM+V +NE E DE+ ++ Q+Q +K LWGL+VCHH
Sbjct: 315 SALRAAHSCHLQYMENMNSIASLVMAVVVNENEEDDEVGSEQPAQQQKKKILWGLIVCHH 374
Query: 366 TSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD-SPVGI 424
SPR+VPFPLRYACEFL QVF V VNKE E+ QLREK ILR QT+L DML ++ SP+ I
Sbjct: 375 ESPRYVPFPLRYACEFLAQVFAVHVNKEFEVQKQLREKSILRMQTILSDMLFKEASPLTI 434
Query: 425 VTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVE 484
V+ PN+MDL+KCDGAAL Y GK+W LG PTE QI+D+A WL E H STGLST+SL +
Sbjct: 435 VSGAPNIMDLIKCDGAALLYGGKVWRLGTAPTESQIRDLALWLSEVHMDSTGLSTESLHD 494
Query: 485 AGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRS 544
AGYPGA ALGD VCG+A KI S D LFWFRS TAKEI+WGGAK+D D R+MHPR
Sbjct: 495 AGYPGASALGDTVCGMAVAKINSSDILFWFRSPTAKEIRWGGAKNDPSDMDDSRRMHPRL 554
Query: 545 SFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKID 604
SFKAFLEVVK +SL W D EMDAIHSLQLILRG++ V K ++ D +++ +
Sbjct: 555 SFKAFLEVVKMKSLAWTDSEMDAIHSLQLILRGAVDGVVKPTGKASLDEQIGDLKLDGLA 614
Query: 605 ELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDS 664
EL+ +T+EMVRL+ETA VPILAVD +G VNGWN KAAELTGL VD AIG ++ LV S
Sbjct: 615 ELQAVTSEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHILTLVEESS 674
Query: 665 VDVVKNMLSSAF 676
V VV+ ML A
Sbjct: 675 VSVVQRMLYLAL 686
>gi|406685287|gb|AFS51084.1| phytochrome P, partial [Taxus cuspidata]
Length = 670
Score = 837 bits (2162), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/629 (66%), Positives = 492/629 (78%), Gaps = 19/629 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAP-----HAVPNI---EQQ 117
AYL R+QRG ++QPFGCM+AV+E +F ++ YSENA EML++ P +VPN+ E +
Sbjct: 1 AYLSRMQRGGILQPFGCMLAVEESSFKIIAYSENALEMLNITPAPSQSQSVPNMVGGESE 60
Query: 118 DALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVI 177
T+G D+R LFT S L++AA E++L NPI++ SGKPFYAI+HRIDVG+VI
Sbjct: 61 GIETIGSDIRRLFTPSSVRNLERAAMAQEISLTNPIVVD-SNSGKPFYAIVHRIDVGIVI 119
Query: 178 DLEPVNPDD----VPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGY 233
DLEPV D V G++ S +LA +A SRLQ++PSG+I LLCD +V EV +LTGY
Sbjct: 120 DLEPVRRGDAAALVSWGGGGSVPSQRLAVRATSRLQAVPSGDIGLLCDTVVEEVRELTGY 179
Query: 234 DRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAP 293
DRVMVYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A
Sbjct: 180 DRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRAT 239
Query: 294 PVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ-- 351
PVKVIQ +L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V +N + D D
Sbjct: 240 PVKVIQSGELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIVNGNGNGNDEDGGG 299
Query: 352 ---EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRT 408
KLWGLVVCHHTSPR VPFPLR ACEFL+Q FG+Q+N E++L+AQL E +ILRT
Sbjct: 300 GSGRSSMKLWGLVVCHHTSPRAVPFPLRSACEFLMQTFGLQINMELQLAAQLIENNILRT 359
Query: 409 QTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLL 468
QT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G WLLGVTP E QIKDIAEWLL
Sbjct: 360 QTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGMCWLLGVTPMEAQIKDIAEWLL 419
Query: 469 EYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAK 528
E H STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAK
Sbjct: 420 ECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAK 479
Query: 529 HDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSK 588
H KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD D+K
Sbjct: 480 HHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSDTK 539
Query: 589 MIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTV 648
+V+ D +++ IDEL + +EMVRLIETA PILAVD+SG VNGWN+K ELTGL V
Sbjct: 540 TMVHARLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSSGIVNGWNAKVGELTGLPV 599
Query: 649 DQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
+A+G +LV DLV +SV+ V+ ML A
Sbjct: 600 GEAMGKSLVHDLVFDESVETVEKMLYHAM 628
>gi|5757903|gb|AAD50631.1|AF122901_1 phytochrome B2 [Solanum lycopersicum]
Length = 1121
Score = 837 bits (2162), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/676 (61%), Positives = 511/676 (75%), Gaps = 13/676 (1%)
Query: 7 NKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPS 61
N++ +S +S+ + A AQ + DA+L F++S +FDYS SV +ST +V
Sbjct: 19 NQSQFSGTSNTNALSKA--VAQYTTDARLHAAFEQSGESGKNFDYSQSVR--NSTESVTE 74
Query: 62 STVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALT 121
++AYL ++QRG IQPFGC IAV+E +F V+ YSENA EMLD+ P +VP++E+ + L
Sbjct: 75 HQITAYLNKMQRGGHIQPFGCTIAVEEASFCVIAYSENACEMLDIMPQSVPSLEKNEILK 134
Query: 122 LGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEP 181
+G DVRTLF+SS + L+ A E+ LLNPI +H K SGKPFYAILHRIDVG+VIDLEP
Sbjct: 135 IGTDVRTLFSSSSSGLLEGAFGAREITLLNPIWVHSKNSGKPFYAILHRIDVGIVIDLEP 194
Query: 182 VNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKF 241
+D ++ AGA++S KLA +AIS LQSLP G+I LLCD +V V +LTGYDRVMVYKF
Sbjct: 195 ARTEDPALSIAGAVQSQKLAVRAISLLQSLPGGDIDLLCDTVVKSVRELTGYDRVMVYKF 254
Query: 242 HEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDK 301
H+DEHGEVVAE RR DLEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD+
Sbjct: 255 HDDEHGEVVAESRRSDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCTAIPVRVIQDE 314
Query: 302 KLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLV 361
L QPL L GSTLRAPHGCH +YM NMG++ASL ++V IN +DE+ + R LWGLV
Sbjct: 315 SLMQPLCLVGSTLRAPHGCHPQYMVNMGNVASLTLAVVINGNDDEVVGGRNAMR-LWGLV 373
Query: 362 VCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSP 421
V HH+S RF+PFPLRYACEFL+Q FG+Q+N E++L++QL EK +LRTQTVLCDMLLRDSP
Sbjct: 374 VGHHSSARFIPFPLRYACEFLMQAFGLQLNMELQLASQLAEKRVLRTQTVLCDMLLRDSP 433
Query: 422 VGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDS 481
GIVTQ P+++DLVKCDGAALYY+G+ + LG+TPT QIK I EWLL H STGLSTDS
Sbjct: 434 TGIVTQNPSIVDLVKCDGAALYYQGRYYPLGITPTAAQIKGIVEWLLTCHVDSTGLSTDS 493
Query: 482 LVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMH 541
L +AGYP A +LG AVCG+A +TSK FLFWFRSHTA EIKWGGAKH KD +KMH
Sbjct: 494 LADAGYPEAASLGAAVCGMAVAYVTSKYFLFWFRSHTASEIKWGGAKHHPEDKDDWQKMH 553
Query: 542 PRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIE 601
PRSSFKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D A +SK IV V ++ ++
Sbjct: 554 PRSSFKAFLEVVKNRSLPWENAEMDAIHSLQLILRDSFKD--ASNSKSIVRVQLREEGLQ 611
Query: 602 KIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLV 660
+DELR + EMVRL+ETA PI AVD G +N WN+K AELT L+V++AIG +LV DLV
Sbjct: 612 GMDELRSVAREMVRLVETATAPIFAVDVEGRINAWNAKVAELTELSVEEAIGKSLVHDLV 671
Query: 661 AGDSVDVVKNMLSSAF 676
+S +N+L A
Sbjct: 672 HEESQTTAQNLLRKAL 687
>gi|363547661|gb|AEW26873.1| phytochrome P [Dioon purpusii]
Length = 590
Score = 837 bits (2161), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/601 (67%), Positives = 483/601 (80%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT + A
Sbjct: 2 IQPFGCMLAVEEGTFRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPASAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++ +NPI +H K+SGK FYAI+HRIDVG+VID EP D ++ AGA++
Sbjct: 61 SLEKAAAAQEISPMNPIWMHGKSSGKAFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEP LG HYPATDIPQASRFL M+N+VRMICDC A PV+V+Q +L +PL L GSTLRA
Sbjct: 179 DLEPCLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVVQAAELRRPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVVN-----------GNMKLWGLVVCHHTSPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W LGVTP E QIKDIA+WLLE H TGLSTDSL EAGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWALGVTPPEAQIKDIADWLLECHADWTGLSTDSLAEAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA KIT+KDFLFWFRSHTAKEIKWGGAKH +D GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAAKITAKDFLFWFRSHTAKEIKWGGAKHHPDDRDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R+ +DEL I +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDTETKTMIHARLNDLRVRGMDELSSIASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A G +LV DLV +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEATGKSLVCDLVYEESMETVERLLCHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|363547681|gb|AEW26883.1| phytochrome P [Encephalartos cerinus]
Length = 582
Score = 836 bits (2160), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/594 (68%), Positives = 480/594 (80%), Gaps = 15/594 (2%)
Query: 84 IAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAAN 143
+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A +L+KAA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSALSLEKAAA 59
Query: 144 FGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAK 203
E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D + AGA++S KLA +
Sbjct: 60 AQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAATSVAGAVQSQKLAVR 117
Query: 204 AISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLG 263
AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR DLEPYLG
Sbjct: 118 AISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 264 FHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHAR 323
HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRAPHGCHA+
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHGCHAQ 237
Query: 324 YMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLI 383
YM NMGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLRYACEFL+
Sbjct: 238 YMANMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLRYACEFLM 286
Query: 384 QVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALY 443
Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALY
Sbjct: 287 QAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 346
Query: 444 YRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAV 503
Y G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYP A +LGDAVCG+AA
Sbjct: 347 YGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMAAA 406
Query: 504 KITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDV 563
+ITSKDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+V
Sbjct: 407 RITSKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENV 466
Query: 564 EMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVP 623
EMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRLIETA P
Sbjct: 467 EMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAP 526
Query: 624 ILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
ILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 527 ILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHAL 580
>gi|6502525|gb|AAF14344.1|AF069305_1 phytochrome B [Pisum sativum]
Length = 1121
Score = 836 bits (2160), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/663 (60%), Positives = 506/663 (76%), Gaps = 10/663 (1%)
Query: 24 RVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLIQPFG 81
+ AQ + DA L F++S FDY+ S+ ++++T +VP ++AYL ++QRG IQPFG
Sbjct: 18 KAIAQYTEDAXLHAVFEKSGDSFDYAQSIRVTAATESVPEQQITAYLAKIQRGGFIQPFG 77
Query: 82 CMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALT----LGIDVRTLFTSSGAAA 137
MIAVDE +F VL YSENA +ML +AP +VP++E + + LG+DVR+LF++S +
Sbjct: 78 SMIAVDETSFRVLAYSENARDMLGIAPQSVPSMEDDSSSSSFFSLGVDVRSLFSASSSVL 137
Query: 138 LQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKS 197
L+KA + E++L+NPI IH +++GKPFY ILHRID+G+VIDLEP +D ++ AGA++S
Sbjct: 138 LEKAFSAREISLMNPIWIHSRSTGKPFYGILHRIDIGVVIDLEPARSEDPALSIAGAVQS 197
Query: 198 YKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPD 257
KLA +AIS+LQ+LP G++ LLCD +V V +LTGYDRVMVYKFHEDEHGEVVAE +R D
Sbjct: 198 QKLAVRAISQLQALPGGDVKLLCDAVVESVRELTGYDRVMVYKFHEDEHGEVVAESKRVD 257
Query: 258 LEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAP 317
LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+V QD+ L QP+ L GSTLRAP
Sbjct: 258 LEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNASPVRVFQDEALVQPVCLVGSTLRAP 317
Query: 318 HGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ---GRKLWGLVVCHHTSPRFVPFP 374
HGCHA+YM NMGSIASL M+V IN +++ +LWGLVVCHHTS R +PFP
Sbjct: 318 HGCHAQYMANMGSIASLAMAVIINGNDEDGGGIGGAARGSMRLWGLVVCHHTSARCIPFP 377
Query: 375 LRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDL 434
LRYACEFL+Q FG+Q+N E++L+ Q EK +L+TQT+LCDMLLRDS GIVTQ+P++MDL
Sbjct: 378 LRYACEFLMQAFGLQLNMELQLAVQSLEKRVLKTQTLLCDMLLRDSHTGIVTQSPSIMDL 437
Query: 435 VKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALG 494
VKCDGAALYY+G LGVTPTE QI+DI +WLL +H STGLSTDSL +AGYPGA +LG
Sbjct: 438 VKCDGAALYYQGNYHPLGVTPTESQIRDIIDWLLAFHSDSTGLSTDSLADAGYPGAASLG 497
Query: 495 DAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVK 554
DAVCG+A IT KDFLFWFRSHTAKEIKWGGAKH KD G+KMHPRSSFKAFLEVVK
Sbjct: 498 DAVCGMAVAYITEKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQKMHPRSSFKAFLEVVK 557
Query: 555 QRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMV 614
RS+ W++ EMDAIHSLQLILR S ++ DSK +V+ + ++ +DEL + EMV
Sbjct: 558 IRSMQWDNAEMDAIHSLQLILRDSFKEAENNDSKAVVHTHMAELELQGVDELSSVAREMV 617
Query: 615 RLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLS 673
RLIETA PI AVD G +NGWN+K +ELTGL V++A+G +LV DLV +S + V +LS
Sbjct: 618 RLIETATAPIFAVDVDGRINGWNAKVSELTGLLVEEAMGKSLVHDLVYKESRETVDKLLS 677
Query: 674 SAF 676
A
Sbjct: 678 HAL 680
>gi|406685291|gb|AFS51086.1| phytochrome P, partial [Taxus globosa]
Length = 670
Score = 836 bits (2159), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/629 (66%), Positives = 492/629 (78%), Gaps = 19/629 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAP-----HAVPNI---EQQ 117
AYL R+QRG ++QPFGCM+AV+E +F ++ YSENA EML++ P +VPN+ E +
Sbjct: 1 AYLSRMQRGGILQPFGCMLAVEESSFKIIAYSENALEMLNITPPPSQSQSVPNMVGGESE 60
Query: 118 DALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVI 177
T+G D+R LFT S L++AA E++L NPI++ SGKPFYAI+HRIDVG+VI
Sbjct: 61 GIETIGSDIRRLFTPSSVRNLERAAMAQEISLTNPIVVD-SNSGKPFYAIVHRIDVGIVI 119
Query: 178 DLEPVNPDD----VPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGY 233
DLEPV D V G++ S +LA +A SRLQ++PSG+I LLCD +V EV +LTGY
Sbjct: 120 DLEPVRRGDAAALVSWGGGGSVPSQRLAVRATSRLQAVPSGDIGLLCDTVVEEVRELTGY 179
Query: 234 DRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAP 293
DRVMVYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A
Sbjct: 180 DRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRAT 239
Query: 294 PVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ-- 351
PVKVIQ +L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V +N + D D
Sbjct: 240 PVKVIQSGELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIVNGNGNGNDEDGGG 299
Query: 352 ---EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRT 408
KLWGLVVCHHTSPR VPFPLR ACEFL+Q FG+Q+N E++L+AQL E +ILRT
Sbjct: 300 GSGRSSMKLWGLVVCHHTSPRAVPFPLRSACEFLMQTFGLQINMELQLAAQLIENNILRT 359
Query: 409 QTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLL 468
QT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G WLLGVTP E QIKDIAEWLL
Sbjct: 360 QTLLCDMLLRDAPMGIVTQSPSIMDLVKCDGAALYYGGMCWLLGVTPMEAQIKDIAEWLL 419
Query: 469 EYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAK 528
E H STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAK
Sbjct: 420 ECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAK 479
Query: 529 HDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSK 588
H KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD D+K
Sbjct: 480 HHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSDTK 539
Query: 589 MIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTV 648
+V+ D +++ IDEL + +EMVRLIETA PILAVD+SG VNGWN+K ELTGL V
Sbjct: 540 TMVHARLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSSGIVNGWNAKVGELTGLPV 599
Query: 649 DQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
+A+G +LV DLV +SV+ V+ ML A
Sbjct: 600 GEAMGKSLVHDLVFDESVETVEKMLYHAM 628
>gi|363547725|gb|AEW26905.1| phytochrome P [Encephalartos longifolius]
Length = 582
Score = 835 bits (2158), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/594 (67%), Positives = 480/594 (80%), Gaps = 15/594 (2%)
Query: 84 IAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAAN 143
+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A +L+KAA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSALSLEKAAA 59
Query: 144 FGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAK 203
E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D + AGA++S KLA +
Sbjct: 60 AQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAATSVAGAVQSQKLAVR 117
Query: 204 AISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLG 263
AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR DLEPYLG
Sbjct: 118 AISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 264 FHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHAR 323
HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRAPHGCHA+
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHGCHAQ 237
Query: 324 YMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLI 383
YM NMGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLRYACEFL+
Sbjct: 238 YMANMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLRYACEFLM 286
Query: 384 QVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALY 443
Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALY
Sbjct: 287 QAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 346
Query: 444 YRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAV 503
Y G +W LGVTP E QIKDIA+WLLEYH TGLSTDSL +AGYPGA +LGDAVCG+AA
Sbjct: 347 YGGMVWALGVTPAEAQIKDIADWLLEYHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAA 406
Query: 504 KITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDV 563
+IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPR SFKAFLEVVK+R LPWE+V
Sbjct: 407 RITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRPSFKAFLEVVKRRCLPWENV 466
Query: 564 EMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVP 623
EMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRLIETA P
Sbjct: 467 EMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAP 526
Query: 624 ILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
ILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 527 ILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHAL 580
>gi|363547846|gb|AEW26963.1| phytochrome P [Zamia integrifolia]
Length = 582
Score = 835 bits (2158), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/594 (67%), Positives = 483/594 (81%), Gaps = 15/594 (2%)
Query: 84 IAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAAN 143
+AV+E+ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT + A +L+KAA
Sbjct: 1 LAVEERTFRIIAYSENAVGMLDLAPQSVPTMERE-LLTIGTDVRTLFTPASALSLEKAAV 59
Query: 144 FGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAK 203
E++L+NP+ +H K+SGKPFYAILHRIDVG+VID EPV ++ AGA++S KLA +
Sbjct: 60 AQEISLMNPVWMHSKSSGKPFYAILHRIDVGMVIDFEPVG--GAAMSVAGAVQSQKLAVR 117
Query: 204 AISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLG 263
AISRLQ+LP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR DLEPYLG
Sbjct: 118 AISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 264 FHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHAR 323
HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRAPHGCHA+
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRMICDCRAAPVRVIQAAELTQPLCLVGSTLRAPHGCHAQ 237
Query: 324 YMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLI 383
YM NMGS+ASLVM+V +N KLWGLVVCHHTSPR VPFP+RYACEFL+
Sbjct: 238 YMANMGSVASLVMAVVMN-----------VNMKLWGLVVCHHTSPRAVPFPVRYACEFLM 286
Query: 384 QVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALY 443
Q FG+Q+N E++L AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALY
Sbjct: 287 QAFGLQLNMELQLVAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 346
Query: 444 YRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAV 503
Y G +W+LGVTPTE QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDAVCG+AA
Sbjct: 347 YGGMVWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAA 406
Query: 504 KITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDV 563
+IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+V
Sbjct: 407 RITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRRSLPWENV 466
Query: 564 EMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVP 623
EMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRLIETA P
Sbjct: 467 EMDAIHSLQLILRGSFQDIDDTETKTMIHSRLTDLRLQSMDELSSVASEMVRLIETATAP 526
Query: 624 ILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
ILAVD+ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 527 ILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHAL 580
>gi|11134029|sp|P93527.2|PHYB_SORBI RecName: Full=Phytochrome B
gi|7110162|gb|AAB41398.2| phytochrome B [Sorghum bicolor]
Length = 1178
Score = 835 bits (2158), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/675 (61%), Positives = 511/675 (75%), Gaps = 27/675 (4%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDYS S+ + S+ ++AYL R+QRG I
Sbjct: 68 SKAVAQYTLDARLHAVFEQSGASGRSFDYSQSLRAPPTPSS--EQQIAAYLSRIQRGGHI 125
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ--DALTLGIDVRTLFTSS 133
QPFGC +AV D+ +F +L +SENA ++LDL+PH +VP+++ ++LG D R LF+ S
Sbjct: 126 QPFGCTLAVADDSSFRLLAFSENAADLLDLSPHHSVPSLDSAAPPPVSLGADARLLFSPS 185
Query: 134 GAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAG 193
A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ AG
Sbjct: 186 SAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAG 245
Query: 194 ALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAEC 253
A++S KLA +AISRLQ+LP G+I LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 246 AVQSQKLAVRAISRLQALPGGDIKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAES 305
Query: 254 RRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGST 313
RR +LEPYLG HYPATDIPQASRFL +N+VRMI DC A PV+VIQD + QPL L GST
Sbjct: 306 RRDNLEPYLGLHYPATDIPQASRFLFRQNRVRMIADCHATPVRVIQDPGMSQPLCLVGST 365
Query: 314 LRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-------KLWGLVVCHHT 366
LRAPHGCHA+YM NMGSIASLVM+V I+ D D++ GR KLWGLVVCHHT
Sbjct: 366 LRAPHGCHAQYMANMGSIASLVMAVIISSGGD----DEQTGRGGISSAMKLWGLVVCHHT 421
Query: 367 SPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVT 426
SPR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVT
Sbjct: 422 SPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVT 481
Query: 427 QTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAG 486
Q+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AG
Sbjct: 482 QSPSIMDLVKCDGAALYYHGKYYPLGVTPTESQIKDIIEWLTVCHGDSTGLSTDSLADAG 541
Query: 487 YPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSF 546
Y GA ALGDAVCG+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSF
Sbjct: 542 YLGAAALGDAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSF 601
Query: 547 KAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEK 602
KAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + +
Sbjct: 602 KAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAAEGTSNSKAIVNGQVQLGELELRG 661
Query: 603 IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVA 661
I+EL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 662 INELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKIAELTGLSVEEAMGKSLVNDLIF 721
Query: 662 GDSVDVVKNMLSSAF 676
+S ++V+ +LS A
Sbjct: 722 KESEEIVEKLLSRAL 736
>gi|39777267|gb|AAR30903.1| phytochrome B [Sorghum bicolor]
Length = 1178
Score = 835 bits (2158), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/675 (61%), Positives = 511/675 (75%), Gaps = 27/675 (4%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDYS S+ + S+ ++AYL R+QRG I
Sbjct: 68 SKAVAQYTLDARLHAVFEQSGASGRSFDYSQSLRAPPTPSS--EQQIAAYLSRIQRGGHI 125
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ--DALTLGIDVRTLFTSS 133
QPFGC +AV D+ +F +L +SENA ++LDL+PH +VP+++ ++LG D R LF+ S
Sbjct: 126 QPFGCTLAVADDSSFRLLAFSENAADLLDLSPHHSVPSLDSAAPPPVSLGADARLLFSPS 185
Query: 134 GAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAG 193
A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ AG
Sbjct: 186 SAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAG 245
Query: 194 ALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAEC 253
A++S KLA +AISRLQ+LP G+I LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 246 AVQSQKLAVRAISRLQALPGGDIKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAES 305
Query: 254 RRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGST 313
RR +LEPYLG HYPATDIPQASRFL +N+VRMI DC A PV+VIQD + QPL L GST
Sbjct: 306 RRDNLEPYLGLHYPATDIPQASRFLFRQNRVRMIADCHATPVRVIQDPGMSQPLCLVGST 365
Query: 314 LRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-------KLWGLVVCHHT 366
LRAPHGCHA+YM NMGSIASLVM+V I+ D D++ GR KLWGLVVCHHT
Sbjct: 366 LRAPHGCHAQYMANMGSIASLVMAVIISSGGD----DEQTGRGGISSAMKLWGLVVCHHT 421
Query: 367 SPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVT 426
SPR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVT
Sbjct: 422 SPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVT 481
Query: 427 QTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAG 486
Q+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AG
Sbjct: 482 QSPSIMDLVKCDGAALYYHGKYYPLGVTPTESQIKDIIEWLTVCHGDSTGLSTDSLADAG 541
Query: 487 YPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSF 546
Y GA ALGDAVCG+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSF
Sbjct: 542 YLGAAALGDAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSF 601
Query: 547 KAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEK 602
KAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + +
Sbjct: 602 KAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAAEGTSNSKAIVNGQVQLGELELRG 661
Query: 603 IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVA 661
I+EL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 662 INELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKIAELTGLSVEEAMGKSLVNDLIF 721
Query: 662 GDSVDVVKNMLSSAF 676
+S ++V+ +LS A
Sbjct: 722 KESEEIVEKLLSRAL 736
>gi|39777291|gb|AAR30915.1| phytochrome B [Sorghum bicolor subsp. x drummondii]
Length = 1177
Score = 835 bits (2157), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/675 (61%), Positives = 511/675 (75%), Gaps = 27/675 (4%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDYS S+ + S+ ++AYL R+QRG I
Sbjct: 67 SKAVAQYTLDARLHAVFEQSGASGRSFDYSQSLRAPPTPSS--EQQIAAYLSRIQRGGHI 124
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ--DALTLGIDVRTLFTSS 133
QPFGC +AV D+ +F +L +SENA ++LDL+PH +VP+++ ++LG D R LF+ S
Sbjct: 125 QPFGCTLAVADDSSFRLLAFSENAADLLDLSPHHSVPSLDSAAPPPVSLGADARLLFSPS 184
Query: 134 GAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAG 193
A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ AG
Sbjct: 185 SAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAG 244
Query: 194 ALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAEC 253
A++S KLA +AISRLQ+LP G+I LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 245 AVQSQKLAVRAISRLQALPGGDIKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAES 304
Query: 254 RRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGST 313
RR +LEPYLG HYPATDIPQASRFL +N+VRMI DC A PV+VIQD + QPL L GST
Sbjct: 305 RRDNLEPYLGLHYPATDIPQASRFLFRQNRVRMIADCHATPVRVIQDPGMSQPLCLVGST 364
Query: 314 LRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-------KLWGLVVCHHT 366
LRAPHGCHA+YM NMGSIASLVM+V I+ D D++ GR KLWGLVVCHHT
Sbjct: 365 LRAPHGCHAQYMANMGSIASLVMAVIISSGGD----DEQTGRGGISSAMKLWGLVVCHHT 420
Query: 367 SPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVT 426
SPR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVT
Sbjct: 421 SPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVT 480
Query: 427 QTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAG 486
Q+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AG
Sbjct: 481 QSPSIMDLVKCDGAALYYHGKYYPLGVTPTESQIKDIIEWLTVCHGDSTGLSTDSLADAG 540
Query: 487 YPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSF 546
Y GA ALGDAVCG+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSF
Sbjct: 541 YLGAAALGDAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSF 600
Query: 547 KAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEK 602
KAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + +
Sbjct: 601 KAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAAEGTSNSKAIVNGQVQLGELELRG 660
Query: 603 IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVA 661
I+EL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 661 INELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKIAELTGLSVEEAMGKSLVNDLIF 720
Query: 662 GDSVDVVKNMLSSAF 676
+S ++V+ +LS A
Sbjct: 721 KESEEIVEKLLSRAL 735
>gi|242041157|ref|XP_002467973.1| hypothetical protein SORBIDRAFT_01g037340 [Sorghum bicolor]
gi|39777261|gb|AAR30900.1| phytochrome B [Sorghum bicolor]
gi|39777263|gb|AAR30901.1| phytochrome B [Sorghum bicolor]
gi|39777265|gb|AAR30902.1| phytochrome B [Sorghum bicolor]
gi|39777269|gb|AAR30904.1| phytochrome B [Sorghum bicolor]
gi|39777275|gb|AAR30907.1| phytochrome B [Sorghum bicolor subsp. verticilliflorum]
gi|39777277|gb|AAR30908.1| phytochrome B [Sorghum bicolor subsp. verticilliflorum]
gi|39777279|gb|AAR30909.1| phytochrome B [Sorghum bicolor subsp. verticilliflorum]
gi|39777281|gb|AAR30910.1| phytochrome B [Sorghum bicolor subsp. verticilliflorum]
gi|39777283|gb|AAR30911.1| phytochrome B [Sorghum bicolor subsp. verticilliflorum]
gi|39777285|gb|AAR30912.1| phytochrome B [Sorghum bicolor subsp. verticilliflorum]
gi|39777287|gb|AAR30913.1| phytochrome B [Sorghum bicolor subsp. verticilliflorum]
gi|241921827|gb|EER94971.1| hypothetical protein SORBIDRAFT_01g037340 [Sorghum bicolor]
Length = 1178
Score = 835 bits (2157), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/675 (61%), Positives = 511/675 (75%), Gaps = 27/675 (4%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDYS S+ + S+ ++AYL R+QRG I
Sbjct: 68 SKAVAQYTLDARLHAVFEQSGASGRSFDYSQSLRAPPTPSS--EQQIAAYLSRIQRGGHI 125
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ--DALTLGIDVRTLFTSS 133
QPFGC +AV D+ +F +L +SENA ++LDL+PH +VP+++ ++LG D R LF+ S
Sbjct: 126 QPFGCTLAVADDSSFRLLAFSENAADLLDLSPHHSVPSLDSAAPPPVSLGADARLLFSPS 185
Query: 134 GAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAG 193
A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ AG
Sbjct: 186 SAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAG 245
Query: 194 ALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAEC 253
A++S KLA +AISRLQ+LP G+I LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 246 AVQSQKLAVRAISRLQALPGGDIKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAES 305
Query: 254 RRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGST 313
RR +LEPYLG HYPATDIPQASRFL +N+VRMI DC A PV+VIQD + QPL L GST
Sbjct: 306 RRDNLEPYLGLHYPATDIPQASRFLFRQNRVRMIADCHATPVRVIQDPGMSQPLCLVGST 365
Query: 314 LRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-------KLWGLVVCHHT 366
LRAPHGCHA+YM NMGSIASLVM+V I+ D D++ GR KLWGLVVCHHT
Sbjct: 366 LRAPHGCHAQYMANMGSIASLVMAVIISSGGD----DEQTGRGGISSAMKLWGLVVCHHT 421
Query: 367 SPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVT 426
SPR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVT
Sbjct: 422 SPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVT 481
Query: 427 QTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAG 486
Q+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AG
Sbjct: 482 QSPSIMDLVKCDGAALYYHGKYYPLGVTPTESQIKDIIEWLTVCHGDSTGLSTDSLADAG 541
Query: 487 YPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSF 546
Y GA ALGDAVCG+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSF
Sbjct: 542 YLGAAALGDAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSF 601
Query: 547 KAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEK 602
KAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + +
Sbjct: 602 KAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAAEGTSNSKAIVNGQVQLGELELRG 661
Query: 603 IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVA 661
I+EL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 662 INELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKIAELTGLSVEEAMGKSLVNDLIF 721
Query: 662 GDSVDVVKNMLSSAF 676
+S ++V+ +LS A
Sbjct: 722 KESEEIVEKLLSRAL 736
>gi|39777289|gb|AAR30914.1| phytochrome B [Sorghum bicolor subsp. verticilliflorum]
Length = 1178
Score = 835 bits (2157), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/675 (61%), Positives = 511/675 (75%), Gaps = 27/675 (4%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDYS S+ + S+ ++AYL R+QRG I
Sbjct: 68 SKAVAQYTLDARLHAVFEQSGASGRSFDYSQSLRAPPTPSS--EQQIAAYLSRIQRGGHI 125
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ--DALTLGIDVRTLFTSS 133
QPFGC +AV D+ +F +L +SENA ++LDL+PH +VP+++ ++LG D R LF+ S
Sbjct: 126 QPFGCTLAVADDSSFRLLAFSENAADLLDLSPHHSVPSLDSAAPPPVSLGADARLLFSPS 185
Query: 134 GAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAG 193
A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ AG
Sbjct: 186 SAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAG 245
Query: 194 ALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAEC 253
A++S KLA +AISRLQ+LP G+I LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 246 AVQSQKLAVRAISRLQALPGGDIKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAES 305
Query: 254 RRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGST 313
RR +LEPYLG HYPATDIPQASRFL +N+VRMI DC A PV+VIQD + QPL L GST
Sbjct: 306 RRDNLEPYLGLHYPATDIPQASRFLFRQNRVRMIADCHATPVRVIQDPGMSQPLCLVGST 365
Query: 314 LRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-------KLWGLVVCHHT 366
LRAPHGCHA+YM NMGSIASLVM+V I+ D D++ GR KLWGLVVCHHT
Sbjct: 366 LRAPHGCHAQYMANMGSIASLVMAVIISSGGD----DEQTGRGGISSAMKLWGLVVCHHT 421
Query: 367 SPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVT 426
SPR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVT
Sbjct: 422 SPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVT 481
Query: 427 QTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAG 486
Q+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AG
Sbjct: 482 QSPSIMDLVKCDGAALYYHGKYYPLGVTPTESQIKDIIEWLTVCHGDSTGLSTDSLADAG 541
Query: 487 YPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSF 546
Y GA ALGDAVCG+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSF
Sbjct: 542 YLGAAALGDAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSF 601
Query: 547 KAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEK 602
KAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + +
Sbjct: 602 KAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAAEGTSNSKAIVNGQVQLGELELRG 661
Query: 603 IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVA 661
I+EL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 662 INELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKIAELTGLSVEEAMGKSLVNDLIF 721
Query: 662 GDSVDVVKNMLSSAF 676
+S ++V+ +LS A
Sbjct: 722 KESEEIVEKLLSRAL 736
>gi|363547669|gb|AEW26877.1| phytochrome P [Encephalartos altensteinii]
gi|363547736|gb|AEW26910.1| phytochrome P [Encephalartos natalensis]
Length = 582
Score = 835 bits (2157), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/594 (67%), Positives = 481/594 (80%), Gaps = 15/594 (2%)
Query: 84 IAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAAN 143
+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A +L+KAA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSALSLEKAAA 59
Query: 144 FGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAK 203
E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D + AGA++S KLA +
Sbjct: 60 AQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAATSVAGAVQSQKLAVR 117
Query: 204 AISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLG 263
AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR DLEPYLG
Sbjct: 118 AISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 264 FHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHAR 323
HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRAPHGCHA+
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHGCHAQ 237
Query: 324 YMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLI 383
YM +MGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLRYACEFL+
Sbjct: 238 YMASMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLRYACEFLM 286
Query: 384 QVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALY 443
Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALY
Sbjct: 287 QAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 346
Query: 444 YRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAV 503
Y G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDAVCG+AA
Sbjct: 347 YGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAA 406
Query: 504 KITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDV 563
+IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+V
Sbjct: 407 RITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENV 466
Query: 564 EMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVP 623
EMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRLIETA P
Sbjct: 467 EMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAP 526
Query: 624 ILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
ILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 527 ILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHAL 580
>gi|363547756|gb|AEW26920.1| phytochrome P [Encephalartos septentrionalis]
Length = 590
Score = 835 bits (2157), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/601 (67%), Positives = 485/601 (80%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D + AGA++
Sbjct: 61 SLEKAAAAQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAATSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G+I LLCD +V +V +LTGYDRV+VY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVVVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM +MGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLR
Sbjct: 239 PHGCHAQYMASMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVT++P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTESPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYP A +LGDA
Sbjct: 348 CDGAALYYGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD R+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDDRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A G +LV DLV +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEATGKSLVCDLVYEESMETVERLLHHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|363547834|gb|AEW26957.1| phytochrome P [Zamia dressleri]
Length = 590
Score = 835 bits (2157), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/601 (66%), Positives = 484/601 (80%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQP G M+AV+E+ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT + A
Sbjct: 2 IQPLGYMLAVEERTFRIIAYSENAVGMLDLAPQSVPTMERE-LLTIGTDVRTLFTPASAL 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KA E++L+NP+ +H K+SGKPFYAILHRIDVG+VID EPV ++ AGA++
Sbjct: 61 SLEKAGAAQEISLMNPVWMHSKSSGKPFYAILHRIDVGMVIDFEPVG--GAAMSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRM+CDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMVCDCRATPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGS+ASLVM+V +N KLWGLVVCHHTSP VPFP R
Sbjct: 239 PHGCHAQYMANMGSVASLVMAVVMN-----------VNMKLWGLVVCHHTSPGAVPFPAR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
YACEFL+Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 288 YACEFLMQAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W+LGVTPTE QIKDIA+WLLE H TGLSTDS +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSSADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VC +AA +IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCRMAAARITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMIHSRLTDLRLQSMDELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|406685301|gb|AFS51091.1| phytochrome P, partial [Torreya grandis]
Length = 675
Score = 835 bits (2157), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/636 (65%), Positives = 491/636 (77%), Gaps = 28/636 (4%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPH--AVPNIEQQDA---- 119
AYL R+QRG IQPFGCM+AV+E +F ++ YSENA EMLD+ PH +VPN+E +
Sbjct: 1 AYLSRMQRGGSIQPFGCMLAVEETSFKIIAYSENALEMLDVMPHFQSVPNMEGRGGDCDG 60
Query: 120 -LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
LT+G DVR LFT S L++AA E++L NPI + SGKPFYAI+HRIDVG+VID
Sbjct: 61 FLTIGSDVRRLFTPSSGRNLERAAMAQEISLTNPIAME-SNSGKPFYAIVHRIDVGIVID 119
Query: 179 LEPVNPDDVPVTAAGA--------LKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDL 230
LEPV D + A + S +LA +A SRLQS+PSG+I LLCD +V EV +L
Sbjct: 120 LEPVRRGDAAALVSWAGGGGGGGTVPSQRLAVRATSRLQSVPSGDIGLLCDTVVEEVREL 179
Query: 231 TGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDC 290
TGYDRVMVYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC
Sbjct: 180 TGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDC 239
Query: 291 LAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDND 350
A PVKV Q ++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V +N + +D D
Sbjct: 240 RATPVKVKQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIVNG--NGIDED 297
Query: 351 QEQGR---------KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLR 401
G KLWGLVVCHHTSPR VPFPLR ACEFL+Q FG+Q+N E++L+AQL
Sbjct: 298 GVTGSGSGSGRSSIKLWGLVVCHHTSPRAVPFPLRSACEFLMQTFGLQINMELQLAAQLI 357
Query: 402 EKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIK 461
E ILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G WLLGVTPTE Q+K
Sbjct: 358 ENSILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGMFWLLGVTPTEAQLK 417
Query: 462 DIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKE 521
DIA+WLLE H STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE
Sbjct: 418 DIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKE 477
Query: 522 IKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD 581
+KWGGAKH KD GR+MHPRSSFKAFLEVVK+RS PWE+VEMDAIHSLQLILRGS QD
Sbjct: 478 MKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSFPWENVEMDAIHSLQLILRGSFQD 537
Query: 582 EVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAA 641
+K +V+ D +++ IDEL + +EMVRLIETA PILAVD+SG VNGWN+K
Sbjct: 538 IDDSGTKTMVHARLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSSGIVNGWNAKVG 597
Query: 642 ELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
ELTGL V +A+G +LV DLV +S++ V+ ML A
Sbjct: 598 ELTGLPVGEAMGKSLVHDLVFEESIETVEKMLYHAL 633
>gi|406685307|gb|AFS51094.1| phytochrome P, partial [Torreya taxifolia]
Length = 675
Score = 835 bits (2156), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/636 (65%), Positives = 491/636 (77%), Gaps = 28/636 (4%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPH--AVPNIEQQDA---- 119
AYL R+QRG IQPFGCM+AV+E +F ++ YSENA EMLD+ PH +VPN+E +D
Sbjct: 1 AYLSRMQRGGSIQPFGCMLAVEETSFKIIAYSENALEMLDVMPHFQSVPNMEGRDGDSDG 60
Query: 120 -LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
LT+G DVR LFT S L++AA E++L NPI + SGKPFYAI+HRIDVG+VID
Sbjct: 61 FLTIGSDVRRLFTPSSGRNLERAAMAQEISLTNPIAME-SNSGKPFYAIVHRIDVGIVID 119
Query: 179 LEPVNPDDVPVTAAGA--------LKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDL 230
LEPV D + A + S +LA +A SRLQS+PSG+I LLCD +V EV +L
Sbjct: 120 LEPVRRGDAAALVSWAGGGGGGGTVPSQRLAVRATSRLQSVPSGDIGLLCDTVVEEVREL 179
Query: 231 TGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDC 290
TGYDRVMVYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC
Sbjct: 180 TGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDC 239
Query: 291 LAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDND 350
A PVKV Q ++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V +N + +D D
Sbjct: 240 RATPVKVKQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIVNG--NGIDED 297
Query: 351 QEQGR---------KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLR 401
G KLWGLVVCHHTSPR V FPLR ACEFL+Q FG+Q+N E++L+AQL
Sbjct: 298 GVSGSGSGSGRSSIKLWGLVVCHHTSPRAVSFPLRSACEFLMQTFGLQINMELQLAAQLI 357
Query: 402 EKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIK 461
E ILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G WLLGVTPTE Q+K
Sbjct: 358 ENSILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGMFWLLGVTPTEAQLK 417
Query: 462 DIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKE 521
DIA+WLLE H STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE
Sbjct: 418 DIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKE 477
Query: 522 IKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD 581
+KWGGAKH KD GR+MHPRSSFKAFLEVVK+RS PWE+VEMDAIHSLQLILRGS QD
Sbjct: 478 MKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSFPWENVEMDAIHSLQLILRGSFQD 537
Query: 582 EVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAA 641
+K +V+ D +++ IDEL + +EMVRLIETA PILAVD+SG VNGWN+K
Sbjct: 538 IDDSGTKTMVHARLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSSGIVNGWNAKVG 597
Query: 642 ELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
ELTGL V +A+G +LV DLV +S++ V+ ML A
Sbjct: 598 ELTGLPVGEAMGKSLVHDLVFEESIETVEKMLYHAL 633
>gi|327241204|gb|AEA40446.1| phytochrome A type 3 [Triticum aestivum]
Length = 1130
Score = 835 bits (2156), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/672 (61%), Positives = 500/672 (74%), Gaps = 13/672 (1%)
Query: 18 RSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNISSSTSNV----PSSTVSAYLQRV 71
R RV AQT++DA+L +F+ES FDYS V T V S V AYLQ +
Sbjct: 15 RQSTQERVLAQTTLDAQLNAEFEESSDSFDYSKLVEAQRDTPTVLQEGRSEKVIAYLQHI 74
Query: 72 QRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFT 131
QRG++IQ FGC++A+DE++F V+ +SENAPEML HAVP+++ L +G +VR+LFT
Sbjct: 75 QRGKMIQSFGCLLALDEKSFNVIAFSENAPEMLTTVSHAVPSVDDPPRLDIGTNVRSLFT 134
Query: 132 SSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTA 191
GA AL KA F +V+LLNPIL+ CK+SGKPFYAI+HR LV+D EPVNP + P TA
Sbjct: 135 DQGATALHKALGFADVSLLNPILVQCKSSGKPFYAIVHRATGCLVVDFEPVNPTEFPATA 194
Query: 192 AGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVA 251
AGAL+SYKLAAKAIS++Q+LP G++ LLC+ +V EV +LTGYDRVM YKFHED HGEV A
Sbjct: 195 AGALQSYKLAAKAISKIQALPGGSMELLCNTVVKEVFELTGYDRVMAYKFHEDNHGEVFA 254
Query: 252 ECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCG 311
E +P LEPYLG HYPATDIPQA+RFL MKNKVRMICD A +KVI+D+ L +SLCG
Sbjct: 255 EITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDVRARSIKVIEDEALPFDISLCG 314
Query: 312 STLRAPHGCHARYMENMGSIASLVMSVTINEAE--DELDND---QEQGRK-LWGLVVCHH 365
S LRA H CH +YMENM SIASLVM+V +NE E DE+ ++ Q+Q +K LWGLVVCHH
Sbjct: 315 SALRAAHSCHLQYMENMNSIASLVMAVVVNENEEDDEVGSEQPAQQQKKKILWGLVVCHH 374
Query: 366 TSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD-SPVGI 424
SPR+VPFPLRYACEFL QVF V VNKE E+ QLREK ILR QT+L DML ++ SP+ I
Sbjct: 375 ESPRYVPFPLRYACEFLAQVFAVHVNKEFEVQKQLREKSILRMQTILSDMLFKEASPLTI 434
Query: 425 VTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVE 484
V+ PN+MDL+KCDGAAL Y GK+W LG PTE QI+D+A WL E H STGLST+SL +
Sbjct: 435 VSGAPNIMDLIKCDGAALLYGGKVWRLGNAPTESQIRDLALWLSEVHMDSTGLSTESLHD 494
Query: 485 AGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRS 544
AGYPGA ALGD VCG+A KI S D LFWFRSHTAKEI+WGGAK+D +D R+MHPR
Sbjct: 495 AGYPGASALGDMVCGMAVAKINSNDILFWFRSHTAKEIRWGGAKNDPSDQDDSRRMHPRL 554
Query: 545 SFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKID 604
SFKAFLEVVK +SL W D EMDAIHSLQLILRG++ V K ++ D +++ +
Sbjct: 555 SFKAFLEVVKMKSLAWTDSEMDAIHSLQLILRGTVDGVVKPTGKASLDEQIGDLKLDGLA 614
Query: 605 ELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDS 664
EL+ +T+EMVRL+ETA VPILAVD +G VNGWN KAAELTGL VD AIG ++ LV S
Sbjct: 615 ELQTVTSEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHILTLVEESS 674
Query: 665 VDVVKNMLSSAF 676
V VV+ ML A
Sbjct: 675 VSVVQRMLYLAL 686
>gi|363547824|gb|AEW26952.1| phytochrome P [Stangeria eriopus]
Length = 590
Score = 835 bits (2156), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/601 (68%), Positives = 485/601 (80%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ F ++ YSENAP MLDLAP +VP +EQ+ L +G DVRTLFT S AA
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAPAMLDLAPQSVPTMEQE-LLAVGADVRTLFTPSSAA 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L NPIL++ ++SGKPFYAILHRIDVG+VID EPV D + AGA++
Sbjct: 61 SLEKAAAAQEISLTNPILMYSRSSGKPFYAILHRIDVGMVIDFEPVG--DAATSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQSLP G++ LLCD +V EV ++ GYDRVMVY+FHEDEHGEVVAE RR
Sbjct: 119 SQKLAVRAISRLQSLPGGDLGLLCDAVVEEVREMAGYDRVMVYRFHEDEHGEVVAEIRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRAKPVRVIQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+V IN KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMVNMGSIASLVMAVVIN-----------VNMKLWGLVVCHHTSPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
ACEFL+Q FG+QVN E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQTP+VMDLVK
Sbjct: 288 CACEFLMQAFGLQVNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQTPSVMDLVK 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY G +W LGVTP E QIKDIA+WLL H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALYYGGMVWALGVTPAEPQIKDIADWLLACHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT DFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITENDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRL
Sbjct: 468 SLPWENVEMDAIHSLQLILRGSFQDIGDTETKTMIHSRLNDLRLQSMDELSCVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A G +LV DLV +S++ V+ +L +A
Sbjct: 528 IETATAPILAVDSGGFVNGWNAKLAELTGLPVGEATGKSLVCDLVYEESMEAVERLLCNA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|121309520|dbj|BAF44083.1| phytochrome b [Lotus japonicus]
Length = 1143
Score = 835 bits (2156), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/660 (61%), Positives = 505/660 (76%), Gaps = 9/660 (1%)
Query: 24 RVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLIQPFG 81
+ AQ + DA+L +++S FDYS S+ ++ +VP ++AYL R+QRG IQPFG
Sbjct: 45 KAIAQYTEDARLHAVYEQSGESFDYSHSLRVT--VESVPEQQITAYLARIQRGGYIQPFG 102
Query: 82 CMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDA---LTLGIDVRTLFTSSGAAAL 138
CMIAVD+ +F +L YS+NA +ML + P +VP+I+ + LG DVR+LF+ S A L
Sbjct: 103 CMIAVDDPSFRLLAYSDNARDMLGITPQSVPSIDDDSSSSSFALGTDVRSLFSPSSAVLL 162
Query: 139 QKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSY 198
KA E++L+NP+ IH +TSG+PFY ILHR+DVG+VIDLEP DD ++ AGA++S
Sbjct: 163 DKAFAAREISLMNPLWIHSRTSGRPFYGILHRVDVGVVIDLEPARSDDPALSIAGAVQSQ 222
Query: 199 KLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDL 258
KLA +AIS+LQSLP G++ LLCD +V V +LTGYDRVMVYKFHEDEHGEVVAE +R DL
Sbjct: 223 KLAVRAISQLQSLPGGDVKLLCDAVVQSVRELTGYDRVMVYKFHEDEHGEVVAESKRADL 282
Query: 259 EPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPH 318
EPY+G HYPATDIPQASRFL +N+VRMI DC A PV V+QD+ L QPL L GSTLRAPH
Sbjct: 283 EPYMGLHYPATDIPQASRFLFKQNRVRMIVDCHASPVGVVQDEALMQPLCLVGSTLRAPH 342
Query: 319 GCHARYMENMGSIASLVMSVTINEAEDE-LDNDQEQGRKLWGLVVCHHTSPRFVPFPLRY 377
GCHA+YM NMGSIASLVM+V IN +D+ + +LWGLVVCHHTS R +PFPLRY
Sbjct: 343 GCHAQYMANMGSIASLVMAVIINGNDDDAVGVGGRSSMRLWGLVVCHHTSARCIPFPLRY 402
Query: 378 ACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKC 437
ACEFL+Q FG+Q+N E++++AQ EK +LRTQT+LCDMLLRDSP GIVTQ+P++MDLVKC
Sbjct: 403 ACEFLMQAFGLQLNMELQMAAQSLEKRVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKC 462
Query: 438 DGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAV 497
DGAALY +G + LGVTP+E QI+DI +WLL +H STGLSTDSL +AGYPGA +LGDAV
Sbjct: 463 DGAALYCQGSYYPLGVTPSESQIRDIIDWLLAFHGDSTGLSTDSLADAGYPGASSLGDAV 522
Query: 498 CGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRS 557
CG+A IT KDFLFWFRSHTAKEIKWGGAKH KD G++MHPRSSFKAFLEVVK RS
Sbjct: 523 CGMAVAYITEKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRS 582
Query: 558 LPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLI 617
PW++ EMDAIHSLQLILR S +++ DSK +VN + ++ +DEL + EMVRLI
Sbjct: 583 SPWDNAEMDAIHSLQLILRDSFKEDEHSDSKAVVNTHLAELELQGVDELSSVAREMVRLI 642
Query: 618 ETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
ETA PI AVD G++NGWN+K +ELTGL V++A+G +LV DLV +S + V +LS A
Sbjct: 643 ETATAPIFAVDVEGHINGWNAKVSELTGLPVEEAMGKSLVRDLVYKESEETVDRLLSRAL 702
>gi|363547667|gb|AEW26876.1| phytochrome P [Encephalartos aemulans]
Length = 582
Score = 835 bits (2156), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/594 (67%), Positives = 480/594 (80%), Gaps = 15/594 (2%)
Query: 84 IAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAAN 143
+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A +L+KAA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSALSLEKAAA 59
Query: 144 FGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAK 203
E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D + AGA++S KLA +
Sbjct: 60 AQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAATSVAGAVQSQKLAVR 117
Query: 204 AISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLG 263
AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR DLEPYLG
Sbjct: 118 AISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 264 FHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHAR 323
HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRAPHGCHA+
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHGCHAQ 237
Query: 324 YMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLI 383
YM NMGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLRYACEFL+
Sbjct: 238 YMANMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLRYACEFLM 286
Query: 384 QVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALY 443
Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALY
Sbjct: 287 QAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 346
Query: 444 YRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAV 503
Y G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYP A +LGDAVCG+AA
Sbjct: 347 YGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMAAA 406
Query: 504 KITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDV 563
+IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+V
Sbjct: 407 RITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENV 466
Query: 564 EMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVP 623
EMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRLIETA P
Sbjct: 467 EMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAP 526
Query: 624 ILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
ILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 527 ILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHAL 580
>gi|363547884|gb|AEW26982.1| phytochrome P [Zamia pygmaea]
Length = 582
Score = 835 bits (2156), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/594 (67%), Positives = 483/594 (81%), Gaps = 15/594 (2%)
Query: 84 IAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAAN 143
+AV+E+ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT + A +L+KAA
Sbjct: 1 LAVEERTFRIIAYSENAVGMLDLAPQSVPTMERE-LLTIGTDVRTLFTPASALSLEKAAV 59
Query: 144 FGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAK 203
E++L+NP+ +H K+SGKPFYAILHRIDVG+VID EPV ++ AGA++S KLA +
Sbjct: 60 AQEISLMNPVWMHSKSSGKPFYAILHRIDVGMVIDFEPVG--GAAMSVAGAVQSQKLAVR 117
Query: 204 AISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLG 263
AISRLQ+LP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR DLEPYLG
Sbjct: 118 AISRLQALPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 264 FHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHAR 323
HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRAPHGCHA+
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHGCHAQ 237
Query: 324 YMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLI 383
YM NMGS+ASLVM+V +N KLWGLVVCHHTSPR VPFP+RYACEFL+
Sbjct: 238 YMANMGSVASLVMAVVMN-----------VNMKLWGLVVCHHTSPRAVPFPVRYACEFLM 286
Query: 384 QVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALY 443
Q FG+Q+N E++L AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALY
Sbjct: 287 QAFGLQLNMELQLVAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 346
Query: 444 YRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAV 503
Y G +W+LGVTPTE QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDAVCG+AA
Sbjct: 347 YGGMVWMLGVTPTEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAA 406
Query: 504 KITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDV 563
+IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+V
Sbjct: 407 RITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDEGRRMHPRSSFKAFLEVVKRRSLPWENV 466
Query: 564 EMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVP 623
EMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRLIETA P
Sbjct: 467 EMDAIHSLQLILRGSFQDIDDTETKTMIHSRLTDLRLQSMDELSSVASEMVRLIETATAP 526
Query: 624 ILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
ILAVD+ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 527 ILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLHHAL 580
>gi|39777271|gb|AAR30905.1| phytochrome B [Sorghum bicolor]
gi|39777273|gb|AAR30906.1| phytochrome B [Sorghum bicolor]
Length = 1178
Score = 835 bits (2156), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/675 (61%), Positives = 511/675 (75%), Gaps = 27/675 (4%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDYS S+ + S+ ++AYL R+QRG I
Sbjct: 68 SKAVAQYTLDARLHAVFEQSGASGRSFDYSQSLRAPPTPSS--EQQIAAYLSRIQRGGHI 125
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQ--DALTLGIDVRTLFTSS 133
QPFGC +AV D+ +F +L +SENA ++LDL+PH +VP+++ ++LG D R LF+ S
Sbjct: 126 QPFGCTLAVADDSSFRLLAFSENAADLLDLSPHHSVPSLDSAAPPPVSLGADARLLFSPS 185
Query: 134 GAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAG 193
A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ AG
Sbjct: 186 SAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAG 245
Query: 194 ALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAEC 253
A++S KLA +AISRLQ+LP G+I LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 246 AVQSQKLAVRAISRLQALPGGDIKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAES 305
Query: 254 RRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGST 313
RR +LEPYLG HYPATDIPQASRFL +N+VRMI DC A PV+VIQD + QPL L GST
Sbjct: 306 RRDNLEPYLGLHYPATDIPQASRFLFRQNRVRMIADCHATPVRVIQDPGMSQPLCLVGST 365
Query: 314 LRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-------KLWGLVVCHHT 366
LRAPHGCHA+YM NMGSIASLVM+V I+ D D++ GR KLWGLVVCHHT
Sbjct: 366 LRAPHGCHAQYMANMGSIASLVMAVIISSGGD----DEQTGRGGISSAMKLWGLVVCHHT 421
Query: 367 SPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVT 426
SPR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVT
Sbjct: 422 SPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVT 481
Query: 427 QTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAG 486
Q+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AG
Sbjct: 482 QSPSIMDLVKCDGAALYYHGKYYPLGVTPTESQIKDIIEWLTVCHGDSTGLSTDSLADAG 541
Query: 487 YPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSF 546
Y GA ALGDAVCG+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSF
Sbjct: 542 YLGAAALGDAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSF 601
Query: 547 KAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVNVPSVDDRIE--K 602
KAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN + +E
Sbjct: 602 KAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAAEGTSNSKAIVNGQAQLGELELRG 661
Query: 603 IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVA 661
I+EL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 662 INELSSVPREMVRLIETATVPIFAVDTDGCINGWNAKIAELTGLSVEEAMGKSLVNDLIF 721
Query: 662 GDSVDVVKNMLSSAF 676
+S ++V+ +LS A
Sbjct: 722 KESEEIVEKLLSRAL 736
>gi|406685669|gb|AFS51275.1| phytochrome P, partial [Taxus canadensis]
Length = 670
Score = 834 bits (2154), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/629 (65%), Positives = 491/629 (78%), Gaps = 19/629 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAP-----HAVPNI---EQQ 117
AYL R+QRG ++QPFGCM+AV+E +F ++ YSENA EML++ P +VPN+ E +
Sbjct: 1 AYLSRMQRGGILQPFGCMLAVEESSFKIIAYSENALEMLNITPPPSQSQSVPNMVGGESE 60
Query: 118 DALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVI 177
T+G D+R LFT S L++AA E++L NPI++ SGKPFYAI+HRIDVG+VI
Sbjct: 61 GIETIGSDIRRLFTPSSVRNLERAAMAQEISLTNPIVVD-SNSGKPFYAIVHRIDVGIVI 119
Query: 178 DLEPVNPDD----VPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGY 233
DLEPV D V G++ S +LA +A SRLQ++PSG+I LLCD +V EV +LTGY
Sbjct: 120 DLEPVRRGDAAALVSWGGGGSVPSQRLAVRATSRLQAVPSGDIGLLCDTVVEEVRELTGY 179
Query: 234 DRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAP 293
DRVMVYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A
Sbjct: 180 DRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRAT 239
Query: 294 PVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ-- 351
PVKVIQ +L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V +N + D D
Sbjct: 240 PVKVIQSGELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIVNGNGNGNDEDGGG 299
Query: 352 ---EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRT 408
KLWGLVVCHHTSPR VPFPLR ACEFL+Q FG+Q+N E++L+AQL E +ILRT
Sbjct: 300 GSGRSSMKLWGLVVCHHTSPRAVPFPLRSACEFLMQTFGLQINMELQLAAQLIENNILRT 359
Query: 409 QTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLL 468
QT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G WLLGVTP E QIKDIAEWLL
Sbjct: 360 QTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGMCWLLGVTPMEAQIKDIAEWLL 419
Query: 469 EYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAK 528
E H STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAK
Sbjct: 420 ECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAK 479
Query: 529 HDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSK 588
H KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD D+K
Sbjct: 480 HHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSDTK 539
Query: 589 MIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTV 648
+V+ D +++ IDEL + + MVRLIETA PILAVD+SG VNGWN+K ELTGL V
Sbjct: 540 TMVHARLNDLKLQGIDELSSVASGMVRLIETATAPILAVDSSGIVNGWNAKVGELTGLPV 599
Query: 649 DQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
+A+G +LV DLV +SV+ V+ ML A
Sbjct: 600 GEAMGKSLVHDLVFDESVETVEKMLYHAM 628
>gi|327241182|gb|AEA40435.1| phytochrome A [Aegilops speltoides]
Length = 1130
Score = 834 bits (2154), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/672 (61%), Positives = 500/672 (74%), Gaps = 13/672 (1%)
Query: 18 RSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNISSSTSNV----PSSTVSAYLQRV 71
R RV AQT++DA+L +F+ES FDYS V T V S V AYLQ +
Sbjct: 15 RQSTQERVLAQTTLDAQLNAEFEESSDSFDYSKLVEAQRDTPTVLQEGRSEKVIAYLQHI 74
Query: 72 QRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFT 131
QRG++IQPFGC++A+DE++F V+ +SENAPEML A HAVP+++ L +G +VR+LFT
Sbjct: 75 QRGKMIQPFGCLLALDEKSFNVIAFSENAPEMLTTASHAVPSVDDPPRLDIGTNVRSLFT 134
Query: 132 SSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTA 191
GA AL KA F +V+LLNPIL+ CKTSGKPFYAI+HR LV+D EPVNP + P +A
Sbjct: 135 DQGATALHKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVNPTEFPASA 194
Query: 192 AGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVA 251
AGAL+SYKLAAKAIS++Q+LP G+I LLC+ +V EV +LTGYDRVM YKFHED HGEV A
Sbjct: 195 AGALQSYKLAAKAISKIQALPGGSIELLCNTVVKEVFELTGYDRVMAYKFHEDNHGEVFA 254
Query: 252 ECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCG 311
E +P LEPYLG HYPATDIPQA+RFL MKNKVRMICD A +KVI+D+ L +SLCG
Sbjct: 255 EITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDVRARSIKVIEDEALPFDISLCG 314
Query: 312 STLRAPHGCHARYMENMGSIASLVMSVTINEAE--DELDND---QEQGRK-LWGLVVCHH 365
S LRA H CH +YMENM SIASLVM+V +NE E DE+ ++ Q+Q +K LWGLVVCHH
Sbjct: 315 SALRAAHSCHLQYMENMNSIASLVMAVVVNENEEDDEVGSEQPAQQQKKKILWGLVVCHH 374
Query: 366 TSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD-SPVGI 424
SPR+VPFPLRYACEFL QVF V VNKE E+ QLREK ILR QT+L DML ++ SP+ I
Sbjct: 375 ESPRYVPFPLRYACEFLAQVFAVHVNKEFEVQKQLREKSILRMQTILSDMLFKEASPLTI 434
Query: 425 VTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVE 484
V+ PN+MDL+KCDGAAL Y K+W LG PTE QI+D+A WL E H STGLST+SL +
Sbjct: 435 VSGAPNIMDLIKCDGAALLYGDKVWRLGNAPTEFQIRDLALWLSEVHMDSTGLSTESLHD 494
Query: 485 AGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRS 544
AGYPGA ALGD+VCG+A KI S D LFWFRSHTA EI+WGGAK+D D R+MHPR
Sbjct: 495 AGYPGASALGDSVCGMAVAKINSSDILFWFRSHTADEIRWGGAKNDPSDVDDSRRMHPRL 554
Query: 545 SFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKID 604
SFKAFLEVVK +SL W D EMDAIHSLQLILRG++ V K ++ D +++ +
Sbjct: 555 SFKAFLEVVKMKSLAWTDSEMDAIHSLQLILRGAVDGVVKPTGKASLDEQIGDLKLDGLA 614
Query: 605 ELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDS 664
EL+ +T+EMVRL+ETA VPILAVD +G VNGWN KAAELTGL VD AIG ++ LV S
Sbjct: 615 ELQAVTSEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHILTLVEESS 674
Query: 665 VDVVKNMLSSAF 676
V VV+ ML A
Sbjct: 675 VSVVQRMLYLAL 686
>gi|363547699|gb|AEW26892.1| phytochrome P [Encephalartos ghellinckii]
Length = 582
Score = 834 bits (2154), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/594 (67%), Positives = 482/594 (81%), Gaps = 15/594 (2%)
Query: 84 IAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAAN 143
+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT+S A +L+KAA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTASSALSLEKAAA 59
Query: 144 FGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAK 203
E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D ++ AGA++S KLA +
Sbjct: 60 AQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAAMSVAGAVQSQKLAVR 117
Query: 204 AISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLG 263
AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR DLEPYLG
Sbjct: 118 AISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 264 FHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHAR 323
HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRAPHGCHA+
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHGCHAQ 237
Query: 324 YMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLI 383
YM +MGSIASLVM+V IN KLWGLVVCHH SPR VPFPLRYACEFL+
Sbjct: 238 YMASMGSIASLVMAVVIN-----------GNTKLWGLVVCHHASPRAVPFPLRYACEFLM 286
Query: 384 QVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALY 443
Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALY
Sbjct: 287 QAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 346
Query: 444 YRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAV 503
Y G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDAVCG+AA
Sbjct: 347 YGGIVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAA 406
Query: 504 KITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDV 563
+IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+V
Sbjct: 407 RITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENV 466
Query: 564 EMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVP 623
EMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRLIETA P
Sbjct: 467 EMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAP 526
Query: 624 ILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
ILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 527 ILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHAL 580
>gi|363547693|gb|AEW26889.1| phytochrome P [Encephalartos eugene-maraisii]
Length = 582
Score = 834 bits (2154), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/594 (67%), Positives = 479/594 (80%), Gaps = 15/594 (2%)
Query: 84 IAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAAN 143
+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A +L+KAA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSALSLEKAAA 59
Query: 144 FGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAK 203
E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D + AGA++S KLA +
Sbjct: 60 AQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAATSVAGAVQSQKLAVR 117
Query: 204 AISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLG 263
AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR DLEPYLG
Sbjct: 118 AISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 264 FHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHAR 323
HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRAPHGCHA+
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHGCHAQ 237
Query: 324 YMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLI 383
YM +MGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLRYACEFL+
Sbjct: 238 YMASMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLRYACEFLM 286
Query: 384 QVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALY 443
Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALY
Sbjct: 287 QAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 346
Query: 444 YRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAV 503
Y G +W LGVTP E QIKDIAEWLLE H TGLSTDSL +AGYP A +LGDAVCG+AA
Sbjct: 347 YGGMVWALGVTPAEAQIKDIAEWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMAAA 406
Query: 504 KITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDV 563
+IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+V
Sbjct: 407 RITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENV 466
Query: 564 EMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVP 623
EMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRLIETA P
Sbjct: 467 EMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAP 526
Query: 624 ILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
ILAVD G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 527 ILAVDCGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHAL 580
>gi|363547818|gb|AEW26949.1| phytochrome P [Macrozamia spiralis]
Length = 582
Score = 834 bits (2154), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/594 (67%), Positives = 482/594 (81%), Gaps = 15/594 (2%)
Query: 84 IAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAAN 143
+AV+E+ F ++ YSENA MLDLAP +VP +EQ LT+G DVRTLFT S A +L+KAA
Sbjct: 1 LAVEERTFRIIAYSENAVGMLDLAPQSVPTMEQV-FLTIGTDVRTLFTPSSALSLEKAAA 59
Query: 144 FGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAK 203
E++L+NPI +H ++SGKPFYAI+HRIDVG+VID EPV D ++ AGA++S KLA +
Sbjct: 60 AQEISLMNPIWMHSRSSGKPFYAIVHRIDVGMVIDFEPVG--DAAMSVAGAVQSQKLAVR 117
Query: 204 AISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLG 263
AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR DLEPYLG
Sbjct: 118 AISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 264 FHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHAR 323
HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L +PL L GSTLRAPHGCHA+
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRRPLCLVGSTLRAPHGCHAQ 237
Query: 324 YMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLI 383
YM NMGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLRYACEFL+
Sbjct: 238 YMANMGSIASLVMAVVIN-----------GNMKLWGLVVCHHTSPRAVPFPLRYACEFLM 286
Query: 384 QVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALY 443
Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALY
Sbjct: 287 QAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 346
Query: 444 YRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAV 503
Y G +W+LGV P E QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDAVCG+AA
Sbjct: 347 YGGMVWVLGVAPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAA 406
Query: 504 KITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDV 563
+IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+V
Sbjct: 407 RITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENV 466
Query: 564 EMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVP 623
EMDAIHSLQLILRGS QD ++K +++ D +++ +DEL + +EMVRLIETA P
Sbjct: 467 EMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLKVQSMDELSSVASEMVRLIETATAP 526
Query: 624 ILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
ILAVD+ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 527 ILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLCHAL 580
>gi|406685289|gb|AFS51085.1| phytochrome P, partial [Taxus floridana]
Length = 670
Score = 833 bits (2153), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/629 (65%), Positives = 491/629 (78%), Gaps = 19/629 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAP-----HAVPNI---EQQ 117
AYL R+QRG ++QPFGCM+AV+E +F ++ YSENA EML++ P +VPN+ E +
Sbjct: 1 AYLSRMQRGGILQPFGCMLAVEESSFKIIAYSENALEMLNITPPPSQSQSVPNMVGGESE 60
Query: 118 DALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVI 177
T+G D+R LFT S L++AA E++L NPI++ SGKPFYAI+HRIDVG+ I
Sbjct: 61 GIETIGSDIRRLFTPSSVRNLERAAMAQEISLTNPIVVD-SNSGKPFYAIVHRIDVGIAI 119
Query: 178 DLEPVNPDD----VPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGY 233
DLEPV D V G++ S +LA +A SRLQ++PSG+I LLCD +V EV +LTGY
Sbjct: 120 DLEPVRRGDAAALVSWGGGGSVPSQRLAVRATSRLQAVPSGDIGLLCDTVVEEVRELTGY 179
Query: 234 DRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAP 293
DRVMVYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A
Sbjct: 180 DRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRAT 239
Query: 294 PVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ-- 351
PVKVIQ +L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V +N + D D
Sbjct: 240 PVKVIQPGELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIVNGNGNGNDEDGGG 299
Query: 352 ---EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRT 408
KLWGLVVCHHTSPR VPFPLR ACEFL+Q FG+Q+N E++L+AQL E +ILRT
Sbjct: 300 GSGRSSMKLWGLVVCHHTSPRAVPFPLRSACEFLMQTFGLQINMELQLAAQLIENNILRT 359
Query: 409 QTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLL 468
QT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G WLLGVTP E QIKDIAEWLL
Sbjct: 360 QTLLCDMLLRDAPMGIVTQSPSIMDLVKCDGAALYYGGMCWLLGVTPMEAQIKDIAEWLL 419
Query: 469 EYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAK 528
E H STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAK
Sbjct: 420 ECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAK 479
Query: 529 HDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSK 588
H KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD D+K
Sbjct: 480 HHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSDTK 539
Query: 589 MIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTV 648
+V+ D +++ IDEL + +EMVRLIETA PILAVD+SG VNGWN+K ELTGL V
Sbjct: 540 TMVHARLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSSGIVNGWNAKVGELTGLPV 599
Query: 649 DQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
+A+G +LV DLV +SV+ V+ ML A
Sbjct: 600 GEAMGKSLVHDLVFDESVETVEKMLYHAM 628
>gi|388458362|gb|AFK31047.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 833 bits (2153), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/674 (61%), Positives = 510/674 (75%), Gaps = 23/674 (3%)
Query: 23 ARVAAQTSIDAKLAEDFDESD-----FDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++SD FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSDASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA---LTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 PGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAF 676
+S + V +LS A
Sbjct: 716 ESEETVNKLLSRAL 729
>gi|363547814|gb|AEW26947.1| phytochrome P [Macrozamia riedlei]
Length = 582
Score = 833 bits (2153), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/594 (67%), Positives = 481/594 (80%), Gaps = 15/594 (2%)
Query: 84 IAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAAN 143
+AV+E+ F ++ YSENA MLDLAP +VP +EQ LT+G DVRTLFT S A +L+KAA
Sbjct: 1 LAVEERTFRIIAYSENAVGMLDLAPQSVPTMEQV-FLTIGTDVRTLFTPSSALSLEKAAA 59
Query: 144 FGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAK 203
E++L+NPI +H ++SGKPFYAI+HRIDVG+VID EPV D ++ AGA++S KLA +
Sbjct: 60 AQEISLMNPIWMHSRSSGKPFYAIVHRIDVGMVIDFEPVG--DAAMSVAGAVQSQKLAVR 117
Query: 204 AISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLG 263
AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR DLEPYLG
Sbjct: 118 AISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 264 FHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHAR 323
HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRAPHGCHA+
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHGCHAQ 237
Query: 324 YMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLI 383
YM NMGSIASLVM+V IN KLWGLVVCHHT PR VPFPLRYACEFL+
Sbjct: 238 YMANMGSIASLVMAVVIN-----------GNMKLWGLVVCHHTCPRAVPFPLRYACEFLM 286
Query: 384 QVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALY 443
Q FG+Q+N E++L+AQL EKHIL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALY
Sbjct: 287 QAFGLQLNMELQLAAQLTEKHILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 346
Query: 444 YRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAV 503
Y G +W+LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDAVCG+AA
Sbjct: 347 YGGMVWVLGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAA 406
Query: 504 KITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDV 563
+IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+V
Sbjct: 407 RITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENV 466
Query: 564 EMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVP 623
EMDAIHSLQLILRGS QD ++K +++ D +++ +DEL + +EM RLIETA P
Sbjct: 467 EMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLKVQSMDELSSVASEMARLIETATAP 526
Query: 624 ILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
ILAVD+ G VNGWN+K AELTGL V +A+G +LV DL+ +S++ V+ +L A
Sbjct: 527 ILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLIYEESMETVERLLCHAL 580
>gi|363547535|gb|AEW26811.1| phytochrome P [Cycas debaoensis]
Length = 582
Score = 833 bits (2153), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/595 (67%), Positives = 481/595 (80%), Gaps = 16/595 (2%)
Query: 83 MIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAA 142
M+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA+L+KAA
Sbjct: 1 MLAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAASLEKAA 59
Query: 143 NFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAA 202
E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++S KLA
Sbjct: 60 VAQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQSQKLAV 117
Query: 203 KAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYL 262
+AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR DLEPYL
Sbjct: 118 RAISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYL 177
Query: 263 GFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHA 322
G HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA HGCH+
Sbjct: 178 GLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRAAHGCHS 237
Query: 323 RYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFL 382
+YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+RYACEFL
Sbjct: 238 QYMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSVRAIPFPVRYACEFL 286
Query: 383 IQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAAL 442
+Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAAL
Sbjct: 287 MQAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAAL 346
Query: 443 YYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAA 502
YY G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPGA +LGDAVCG+AA
Sbjct: 347 YYGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAA 406
Query: 503 VKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWED 562
+ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+
Sbjct: 407 ARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRRSLPWEN 465
Query: 563 VEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAV 622
VEMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRLIETA
Sbjct: 466 VEMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATA 525
Query: 623 PILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
PILAVD+ G VNGWN+K AELTGL V++A+G +LV +LV +SV+ V+ +L A
Sbjct: 526 PILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHNLVYEESVETVERLLYHAL 580
>gi|363547771|gb|AEW26927.1| phytochrome P [Lepidozamia hopei]
Length = 582
Score = 833 bits (2153), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/594 (67%), Positives = 481/594 (80%), Gaps = 15/594 (2%)
Query: 84 IAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAAN 143
+AV+E F ++ YSENA MLDLAP +VP EQ+ LT+G D+RTLFT S A +L+KAA
Sbjct: 1 LAVEECTFRIIAYSENAVGMLDLAPQSVPTTEQE-FLTIGTDIRTLFTPSSALSLEKAAA 59
Query: 144 FGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAK 203
E++L+NPI +H ++SGKPFYA++HRIDVG+VID EPV D ++ AGA++S KLA +
Sbjct: 60 AQEISLMNPIWMHSRSSGKPFYAVVHRIDVGMVIDFEPVG--DAAMSVAGAVQSQKLAVR 117
Query: 204 AISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLG 263
AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR DLEPYLG
Sbjct: 118 AISRLQSLPVGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 264 FHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHAR 323
HYP+TDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRAPHGCHA+
Sbjct: 178 LHYPSTDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHGCHAQ 237
Query: 324 YMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLI 383
YM NMGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLRYACEFL+
Sbjct: 238 YMVNMGSIASLVMAVVIN-----------GNMKLWGLVVCHHTSPRAVPFPLRYACEFLM 286
Query: 384 QVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALY 443
Q FG+Q+N E++L+AQL EK ILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALY
Sbjct: 287 QAFGLQLNMELQLAAQLTEKRILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 346
Query: 444 YRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAV 503
Y G +W+LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDAVCG+AA
Sbjct: 347 YGGMVWVLGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAA 406
Query: 504 KITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDV 563
+IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+V
Sbjct: 407 RITAKDFLFWFRSHTAKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENV 466
Query: 564 EMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVP 623
EMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRLIETA P
Sbjct: 467 EMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSVDELSSVASEMVRLIETATAP 526
Query: 624 ILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
ILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 527 ILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHAL 580
>gi|39777293|gb|AAR30916.1| phytochrome B [Sorghum propinquum]
Length = 1177
Score = 833 bits (2152), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/675 (61%), Positives = 510/675 (75%), Gaps = 27/675 (4%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDYS S+ + S+ ++AYL R+QRG I
Sbjct: 67 SKAVAQYTLDARLHAVFEQSGASGRSFDYSQSLRAPPTPSS--EQQIAAYLSRIQRGGHI 124
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA--LTLGIDVRTLFTSS 133
QPFGC +AV D+ +F +L +SENA ++LDL+PH +VP+++ ++LG D R LF+ S
Sbjct: 125 QPFGCTLAVADDSSFRLLAFSENAADLLDLSPHHSVPSLDSAAPPHVSLGADARLLFSPS 184
Query: 134 GAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAG 193
A L++A E++LLNP+ IH + S PFYAILHRIDVG+VIDLEP +D ++ AG
Sbjct: 185 SAVLLERAFAAREISLLNPLWIHSRVSSNPFYAILHRIDVGVVIDLEPARTEDPALSIAG 244
Query: 194 ALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAEC 253
A++S KLA +AISRLQ+LP G+I LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 245 AVQSQKLAVRAISRLQALPGGDIKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAES 304
Query: 254 RRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGST 313
RR +LEPYLG HYPATDIPQASRFL +N+VRMI DC A PV+VIQD + QPL L GST
Sbjct: 305 RRDNLEPYLGLHYPATDIPQASRFLFRQNRVRMIADCHATPVRVIQDPGMSQPLCLVGST 364
Query: 314 LRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-------KLWGLVVCHHT 366
LRAPHGCHA+YM NMGSIASLVM+V I+ D D++ GR KLWGLVVCHHT
Sbjct: 365 LRAPHGCHAQYMANMGSIASLVMAVIISSGGD----DEQTGRGGISSAMKLWGLVVCHHT 420
Query: 367 SPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVT 426
SPR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVT
Sbjct: 421 SPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVT 480
Query: 427 QTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAG 486
Q+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AG
Sbjct: 481 QSPSIMDLVKCDGAALYYHGKYYPLGVTPTESQIKDIIEWLTVCHGDSTGLSTDSLADAG 540
Query: 487 YPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSF 546
Y GA ALGDAVCG+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSF
Sbjct: 541 YLGAAALGDAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSF 600
Query: 547 KAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEK 602
KAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + +
Sbjct: 601 KAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAAEGTSNSKAIVNGQVQLGELELRG 660
Query: 603 IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVA 661
I+EL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 661 INELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKIAELTGLSVEEAMGKSLVNDLIF 720
Query: 662 GDSVDVVKNMLSSAF 676
+S ++V+ +LS A
Sbjct: 721 KESEEIVEKLLSRAL 735
>gi|363547761|gb|AEW26922.1| phytochrome P [Encephalartos trispinosus]
Length = 582
Score = 833 bits (2152), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/594 (67%), Positives = 479/594 (80%), Gaps = 15/594 (2%)
Query: 84 IAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAAN 143
+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A +L+KAA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSALSLEKAAA 59
Query: 144 FGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAK 203
E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D + AGA++S KLA +
Sbjct: 60 AQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAATSVAGAVQSQKLAVR 117
Query: 204 AISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLG 263
AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR DLEPYLG
Sbjct: 118 AISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 264 FHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHAR 323
HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRAPHGCHA+
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHGCHAQ 237
Query: 324 YMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLI 383
YM NMGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLRYACEFL+
Sbjct: 238 YMANMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLRYACEFLM 286
Query: 384 QVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALY 443
Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALY
Sbjct: 287 QAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 346
Query: 444 YRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAV 503
Y G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYP A +LGDAVCG+AA
Sbjct: 347 YGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMAAA 406
Query: 504 KITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDV 563
+IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+
Sbjct: 407 RITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENA 466
Query: 564 EMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVP 623
EMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRLIETA P
Sbjct: 467 EMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAP 526
Query: 624 ILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
ILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 527 ILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHAL 580
>gi|406685283|gb|AFS51082.1| phytochrome P, partial [Taxus brevifolia]
Length = 672
Score = 832 bits (2150), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/631 (65%), Positives = 492/631 (77%), Gaps = 21/631 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHA-------VPNI---E 115
AYL R+QRG ++QPFGCM+AV+E +F ++ YSENA EML++ P VPN+ E
Sbjct: 1 AYLSRMQRGGILQPFGCMLAVEESSFKIIAYSENALEMLNITPPPSQSQSQSVPNMVGGE 60
Query: 116 QQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGL 175
+ T+G D+R LFT S L++AA E++L NPI++ +SGKPFYAI+HRIDVG+
Sbjct: 61 SEGIETIGSDIRRLFTPSSVRNLERAAMAQEISLTNPIVVD-SSSGKPFYAIVHRIDVGI 119
Query: 176 VIDLEPVNPDD----VPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLT 231
VIDLEPV D V G++ S +LA +A SRLQ++PSG+I LLCD +V EV +LT
Sbjct: 120 VIDLEPVRRGDAAALVSWGGGGSVPSQRLAVRATSRLQAVPSGDIGLLCDTVVEEVRELT 179
Query: 232 GYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCL 291
GYDRVMVYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC
Sbjct: 180 GYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCR 239
Query: 292 APPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ 351
A PVKVIQ +L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V +N + D D
Sbjct: 240 ATPVKVIQSGELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIVNGNGNGNDEDG 299
Query: 352 -----EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHIL 406
KLWGLVVCHHTSPR VPFPLR ACEFL+Q FG+Q+N E++L+AQL E +IL
Sbjct: 300 GGGSGRSSMKLWGLVVCHHTSPRAVPFPLRSACEFLMQTFGLQINMELQLAAQLIENNIL 359
Query: 407 RTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEW 466
RTQT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G WLLGVTP E QIKDIAEW
Sbjct: 360 RTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGMCWLLGVTPMEAQIKDIAEW 419
Query: 467 LLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGG 526
LLE H STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGG
Sbjct: 420 LLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGG 479
Query: 527 AKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAED 586
AKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD D
Sbjct: 480 AKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSD 539
Query: 587 SKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGL 646
+K +V+ D +++ IDEL + +EMVRLIETA PILAVD+SG VNGWN+K ELTGL
Sbjct: 540 TKTMVHARLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSSGIVNGWNAKVGELTGL 599
Query: 647 TVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
V +A+G +LV DLV +SV+ V+ ML A
Sbjct: 600 PVGEAMGKSLVHDLVFDESVETVEKMLYHAM 630
>gi|327241172|gb|AEA40430.1| phytochrome A type 1 [Triticum aestivum]
Length = 1130
Score = 832 bits (2150), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/672 (61%), Positives = 498/672 (74%), Gaps = 13/672 (1%)
Query: 18 RSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNISSSTSNV----PSSTVSAYLQRV 71
R RV AQT++DA+L F+ES FDYS V T V S V AYLQ +
Sbjct: 15 RQSTQERVLAQTTLDAELNAGFEESSDSFDYSKLVEAQRDTPTVLQEGRSEKVIAYLQHI 74
Query: 72 QRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFT 131
QRG++IQ FGC++A+DE++F V+ +S NAPEML HAVP+++ L +G +VR+LFT
Sbjct: 75 QRGKMIQSFGCLLALDEKSFNVIAFSGNAPEMLTTVSHAVPSVDDPPRLDIGTNVRSLFT 134
Query: 132 SSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTA 191
GAAAL KA F +V+LLNPIL+ CKTSGKPFYAI+HR LV+D EPVNP + P TA
Sbjct: 135 DQGAAALHKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVNPTEFPATA 194
Query: 192 AGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVA 251
AGAL+SYKLAAKAIS++Q+LP G++ LLC+ +V EV DLTGYDRVM YKFHED HGEV A
Sbjct: 195 AGALQSYKLAAKAISKIQALPGGSMELLCNTVVKEVFDLTGYDRVMAYKFHEDNHGEVFA 254
Query: 252 ECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCG 311
E +P LEPYLG HYPATDIPQA+RFL MKNKVR+ICD A P+KVI+D+ L +SLCG
Sbjct: 255 EITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRLICDVRARPIKVIEDEALPFDISLCG 314
Query: 312 STLRAPHGCHARYMENMGSIASLVMSVTINEAE--DELDND---QEQGRK-LWGLVVCHH 365
S LRA H CH +YMENM SIASLVM+V +NE E DE+ ++ Q+Q +K LWGL+VCHH
Sbjct: 315 SALRAAHSCHLQYMENMNSIASLVMAVVVNENEEDDEVGSEQPAQQQKKKILWGLIVCHH 374
Query: 366 TSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD-SPVGI 424
SPR+VPFPLRYACEFL QVF V VNKE E+ QLREK ILR QT+L DML ++ SP+ I
Sbjct: 375 ESPRYVPFPLRYACEFLAQVFAVHVNKEFEVQKQLREKSILRMQTILSDMLFKEASPLTI 434
Query: 425 VTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVE 484
V+ PN+MDL+KCDGAAL Y GK+W LG PTE QI+D+A WL E H STGLST+SL +
Sbjct: 435 VSGAPNIMDLIKCDGAALLYGGKVWRLGTAPTESQIRDLALWLSEVHMDSTGLSTESLHD 494
Query: 485 AGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRS 544
AGYPGA ALGD VCG+A KI S D LFWFRS TAKEI+WGGAK+D D R+MHPR
Sbjct: 495 AGYPGASALGDTVCGMAVAKINSSDILFWFRSPTAKEIRWGGAKNDPSDMDDSRRMHPRL 554
Query: 545 SFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKID 604
SFKAFLEVVK +SL W D EMDAIHSLQLILRG++ V K ++ D +++ +
Sbjct: 555 SFKAFLEVVKMKSLAWADSEMDAIHSLQLILRGAVDGVVKPTGKASLDEQIGDLKLDGLA 614
Query: 605 ELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDS 664
EL+ +T+EMVRL+ETA VPILAVD +G VNGWN KAAELTGL VD AIG ++ LV S
Sbjct: 615 ELQAVTSEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHILTLVEESS 674
Query: 665 VDVVKNMLSSAF 676
V VV+ ML A
Sbjct: 675 VSVVQRMLYLAL 686
>gi|363547721|gb|AEW26903.1| phytochrome P [Encephalartos lebomboensis]
Length = 582
Score = 832 bits (2150), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/594 (67%), Positives = 479/594 (80%), Gaps = 15/594 (2%)
Query: 84 IAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAAN 143
+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A +L+KAA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSALSLEKAAA 59
Query: 144 FGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAK 203
E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D + AGA++S KLA +
Sbjct: 60 AQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAATSVAGAVQSQKLAVR 117
Query: 204 AISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLG 263
AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR DLEPYLG
Sbjct: 118 AISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 264 FHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHAR 323
HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRAPHGCHA+
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHGCHAQ 237
Query: 324 YMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLI 383
YM NMGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLRYACEFL+
Sbjct: 238 YMANMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLRYACEFLM 286
Query: 384 QVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALY 443
Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALY
Sbjct: 287 QAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 346
Query: 444 YRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAV 503
Y G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYP A +LGDAVCG+AA
Sbjct: 347 YGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMAAA 406
Query: 504 KITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDV 563
+IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+V
Sbjct: 407 RITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENV 466
Query: 564 EMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVP 623
EMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRLIETA P
Sbjct: 467 EMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAP 526
Query: 624 ILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
ILAVD+ G VNGWN+K AELTGL V +A+G +LV LV +S++ V+ +L A
Sbjct: 527 ILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCGLVYEESMETVERLLHHAL 580
>gi|363547763|gb|AEW26923.1| phytochrome P [Encephalartos turneri]
Length = 582
Score = 832 bits (2149), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/594 (67%), Positives = 479/594 (80%), Gaps = 15/594 (2%)
Query: 84 IAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAAN 143
+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A +L+KAA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSALSLEKAAA 59
Query: 144 FGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAK 203
E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D + AGA++S KLA +
Sbjct: 60 AQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAATSVAGAVQSQKLAVR 117
Query: 204 AISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLG 263
AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR DLEPYLG
Sbjct: 118 AISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 264 FHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHAR 323
HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRAPHGCHA+
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHGCHAQ 237
Query: 324 YMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLI 383
YM +MGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLRYACEFL+
Sbjct: 238 YMASMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLRYACEFLM 286
Query: 384 QVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALY 443
Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALY
Sbjct: 287 QAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 346
Query: 444 YRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAV 503
Y G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYP A +LGDAVCG+AA
Sbjct: 347 YGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMAAA 406
Query: 504 KITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDV 563
+IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+V
Sbjct: 407 RITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENV 466
Query: 564 EMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVP 623
EMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRLIETA P
Sbjct: 467 EMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAP 526
Query: 624 ILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
ILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S + V+ +L A
Sbjct: 527 ILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESTETVERLLHHAL 580
>gi|327241176|gb|AEA40432.1| phytochrome A type 1 [Triticum dicoccoides]
Length = 1130
Score = 832 bits (2149), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/672 (61%), Positives = 499/672 (74%), Gaps = 13/672 (1%)
Query: 18 RSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNISSSTSNV----PSSTVSAYLQRV 71
R RV AQT++DA+L +F+ES FD S V T V S V AYLQ +
Sbjct: 15 RQSTQERVLAQTTLDAELNAEFEESSDSFDDSKLVEAQRDTPTVLQEGRSEKVIAYLQHI 74
Query: 72 QRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFT 131
QRG++IQ FGC++A+DE++F V+ +SENAPEML HAVP+++ L +G +VR+LFT
Sbjct: 75 QRGKMIQSFGCLLALDEKSFNVIAFSENAPEMLTTVSHAVPSVDDPPRLDIGTNVRSLFT 134
Query: 132 SSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTA 191
GAAAL KA F +V+LLNPIL+ CKTSGKPFYAI+HR LV+D EPVNP + P TA
Sbjct: 135 DQGAAALHKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVNPTEFPATA 194
Query: 192 AGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVA 251
AGAL+SYKLAAKAIS++Q+LP G++ LLC+ +V EV DLTGYDRVM YKFHED HGEV A
Sbjct: 195 AGALQSYKLAAKAISKIQALPGGSMELLCNTVVKEVFDLTGYDRVMAYKFHEDNHGEVFA 254
Query: 252 ECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCG 311
E +P LEPYLG HYPATDIPQA+RFL MKNKVR+ICD A P+KVI+D+ L +SLCG
Sbjct: 255 EITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRLICDVRARPIKVIEDEALPFDISLCG 314
Query: 312 STLRAPHGCHARYMENMGSIASLVMSVTINEAE--DELDND---QEQGRK-LWGLVVCHH 365
S LRA H CH +YMENM SIASLVM+V +NE E DE+ ++ Q+Q +K LWGL+VCHH
Sbjct: 315 SALRAAHSCHLQYMENMNSIASLVMAVVVNENEEDDEVGSEQPAQQQKKKILWGLIVCHH 374
Query: 366 TSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD-SPVGI 424
SPR+VPFPLRYACEFL QVF V VNKE E+ QLREK ILR QT+L DML ++ SP+ I
Sbjct: 375 ESPRYVPFPLRYACEFLAQVFAVHVNKEFEVQKQLREKSILRMQTILSDMLFKEASPLTI 434
Query: 425 VTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVE 484
V+ PN+MDL+KCDGAAL Y GK+W LG PTE QI+D+A WL E H STGLST+SL +
Sbjct: 435 VSGAPNIMDLIKCDGAALLYGGKVWRLGTAPTESQIRDLALWLSEVHMDSTGLSTESLHD 494
Query: 485 AGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRS 544
AGYPGA ALGD VCG+A KI S D LFWFRS TAKEI+WGGAK+D D R+MHPR
Sbjct: 495 AGYPGASALGDTVCGMAVAKINSSDILFWFRSPTAKEIRWGGAKNDPSDMDDSRRMHPRL 554
Query: 545 SFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKID 604
SFKAFLEVVK +SL W D EMDAIHSLQLILRG++ V K ++ D +++ +
Sbjct: 555 SFKAFLEVVKMKSLAWTDSEMDAIHSLQLILRGAVDGVVKPTGKASLDEQIGDLKLDGLA 614
Query: 605 ELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDS 664
EL+ +T+EMVRL+ETA VPILAVD +G VNGWN KAAELTGL VD AIG ++ LV S
Sbjct: 615 ELQAVTSEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHILTLVEESS 674
Query: 665 VDVVKNMLSSAF 676
V VV+ ML A
Sbjct: 675 VSVVQRMLYLAL 686
>gi|363547765|gb|AEW26924.1| phytochrome P [Encephalartos villosus]
Length = 582
Score = 832 bits (2149), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/594 (67%), Positives = 479/594 (80%), Gaps = 15/594 (2%)
Query: 84 IAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAAN 143
+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A +L+KAA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSALSLEKAAA 59
Query: 144 FGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAK 203
E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D + AGA++S +LA +
Sbjct: 60 AQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAATSVAGAVQSQRLAVR 117
Query: 204 AISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLG 263
AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR DLEPYLG
Sbjct: 118 AISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 264 FHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHAR 323
HYPATDIPQASRFL M+N+ RMICDC A PV+VIQ +L QPL L GSTLRAPHGCHA+
Sbjct: 178 LHYPATDIPQASRFLFMQNRARMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHGCHAQ 237
Query: 324 YMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLI 383
YM +MGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLRYACEFL+
Sbjct: 238 YMASMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLRYACEFLM 286
Query: 384 QVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALY 443
Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALY
Sbjct: 287 QAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 346
Query: 444 YRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAV 503
Y G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDAVCG+AA
Sbjct: 347 YGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAA 406
Query: 504 KITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDV 563
+IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+V
Sbjct: 407 RITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENV 466
Query: 564 EMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVP 623
EMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + EMVRLIETA P
Sbjct: 467 EMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVAGEMVRLIETATAP 526
Query: 624 ILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
ILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 527 ILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHAL 580
>gi|363547673|gb|AEW26879.1| phytochrome P [Encephalartos arenarius]
Length = 582
Score = 831 bits (2147), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/594 (67%), Positives = 478/594 (80%), Gaps = 15/594 (2%)
Query: 84 IAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAAN 143
+ V+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A +L+KAA
Sbjct: 1 LVVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSALSLEKAAA 59
Query: 144 FGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAK 203
E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D + AGA++S KLA +
Sbjct: 60 AQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAATSVAGAVQSQKLAVR 117
Query: 204 AISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLG 263
AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR DLEPYLG
Sbjct: 118 AISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 264 FHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHAR 323
HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRAPHGCHA+
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHGCHAQ 237
Query: 324 YMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLI 383
YM NMGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLRYACEFL+
Sbjct: 238 YMANMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLRYACEFLM 286
Query: 384 QVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALY 443
Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALY
Sbjct: 287 QAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 346
Query: 444 YRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAV 503
Y G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYP A +LGDAVCG+AA
Sbjct: 347 YGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMAAA 406
Query: 504 KITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDV 563
+IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+
Sbjct: 407 RITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENA 466
Query: 564 EMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVP 623
EMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRLIETA P
Sbjct: 467 EMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAP 526
Query: 624 ILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
ILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 527 ILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHAL 580
>gi|388458330|gb|AFK31031.1| phytochrome b, partial [Oryza rufipogon]
gi|388458368|gb|AFK31050.1| phytochrome b, partial [Oryza rufipogon]
gi|388458370|gb|AFK31051.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 831 bits (2147), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/674 (61%), Positives = 509/674 (75%), Gaps = 23/674 (3%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA---LTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 PGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAF 676
+S + V +LS A
Sbjct: 716 ESEETVNKLLSRAL 729
>gi|388458332|gb|AFK31032.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 831 bits (2147), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/674 (61%), Positives = 509/674 (75%), Gaps = 23/674 (3%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA---LTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 PGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAF 676
+S + V +LS A
Sbjct: 716 ESEETVNKLLSRAL 729
>gi|363547723|gb|AEW26904.1| phytochrome P [Encephalartos lehmannii]
Length = 582
Score = 831 bits (2146), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/594 (67%), Positives = 479/594 (80%), Gaps = 15/594 (2%)
Query: 84 IAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAAN 143
+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A +L+KAA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSALSLEKAAA 59
Query: 144 FGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAK 203
E++L+NPI +H K+ GKPFYAI+HRIDVG+VID EPV D ++ AGA++S KLA +
Sbjct: 60 AQEISLMNPIWMHSKSFGKPFYAIVHRIDVGMVIDFEPVG--DAAMSVAGAVQSQKLAVR 117
Query: 204 AISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLG 263
AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR DLEPYLG
Sbjct: 118 AISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 264 FHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHAR 323
HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRAPHGCHA+
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHGCHAQ 237
Query: 324 YMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLI 383
YM NMGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLRYACEFL+
Sbjct: 238 YMANMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLRYACEFLM 286
Query: 384 QVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALY 443
Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALY
Sbjct: 287 QAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 346
Query: 444 YRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAV 503
Y G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYP A +LGDAVCG+AA
Sbjct: 347 YGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMAAA 406
Query: 504 KITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDV 563
+IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+
Sbjct: 407 RITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENA 466
Query: 564 EMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVP 623
EMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRLIETA P
Sbjct: 467 EMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAP 526
Query: 624 ILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
ILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 527 ILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHAL 580
>gi|406685275|gb|AFS51078.1| phytochrome P, partial [Cephalotaxus mannii]
Length = 675
Score = 831 bits (2146), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/634 (65%), Positives = 493/634 (77%), Gaps = 24/634 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHA--------VPNIEQQ 117
AYL R+QRG IQPFGCM+AV+E +F ++ YSENA EMLD+ PH+ VP +E
Sbjct: 1 AYLSRMQRGGSIQPFGCMLAVEETSFKIIAYSENALEMLDVMPHSHSHSHSHSVPTMEGG 60
Query: 118 DA---LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
++ +T+G DVR LFT S L++AA E++L NPI + SGKPFYAI+HRIDVG
Sbjct: 61 ESEGIVTIGSDVRRLFTPSSGRNLERAAMSQEISLANPIAMD-SNSGKPFYAIVHRIDVG 119
Query: 175 LVIDLEPVNPDDVPVTAA--------GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNE 226
+VIDLE V D + G + S +LA +A SRLQ++PSG+I LLCD +V E
Sbjct: 120 IVIDLELVRRGDAAALVSWGGGGLGGGTVPSQRLAVRATSRLQAVPSGDIGLLCDTVVEE 179
Query: 227 VSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRM 286
V +LTGYDRVMVYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRM
Sbjct: 180 VRELTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRM 239
Query: 287 ICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDE 346
ICDC A PVKVIQ ++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V +N ++
Sbjct: 240 ICDCRATPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIVNGNGND 299
Query: 347 LDNDQEQGR---KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREK 403
D GR KLWGLVVCHHTSPR VPFPLR ACEFL+Q FG+Q+N E++L+AQL E
Sbjct: 300 EDGVSGSGRSSMKLWGLVVCHHTSPRAVPFPLRSACEFLMQTFGLQINMELQLAAQLTEN 359
Query: 404 HILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDI 463
+ILRTQT+LCDMLLRD+P+GIV+Q+P++MDLVKCDGAALYY G WLLGVTP E QIKDI
Sbjct: 360 NILRTQTLLCDMLLRDAPIGIVSQSPSIMDLVKCDGAALYYGGMFWLLGVTPVEAQIKDI 419
Query: 464 AEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIK 523
A+WLLE H STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+K
Sbjct: 420 ADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMK 479
Query: 524 WGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEV 583
WGGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS +D
Sbjct: 480 WGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFEDID 539
Query: 584 AEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAEL 643
D+K +V+ D +++ IDEL + +EMVRLIETA PILAVD++G VNGWN+K EL
Sbjct: 540 DSDTKTMVHARLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSTGIVNGWNAKVGEL 599
Query: 644 TGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
TGL V +A+G +LV DLV +S++ V+ ML A
Sbjct: 600 TGLPVGEAMGKSLVHDLVFEESIETVEKMLYHAL 633
>gi|388458328|gb|AFK31030.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 831 bits (2146), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/674 (61%), Positives = 509/674 (75%), Gaps = 23/674 (3%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA---LTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADVLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 PGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAF 676
+S + V +LS A
Sbjct: 716 ESEETVNKLLSRAL 729
>gi|363547767|gb|AEW26925.1| phytochrome P [Encephalartos whitelockii]
Length = 582
Score = 831 bits (2146), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/594 (67%), Positives = 480/594 (80%), Gaps = 15/594 (2%)
Query: 84 IAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAAN 143
+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A +L+KAA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSALSLEKAAA 59
Query: 144 FGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAK 203
E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D + AGA++S KLA +
Sbjct: 60 AQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAATSVAGAVQSQKLAVR 117
Query: 204 AISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLG 263
AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR DLEPYLG
Sbjct: 118 AISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 264 FHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHAR 323
HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRAPHGCHA+
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHGCHAQ 237
Query: 324 YMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLI 383
YM +MGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLRYACEFL+
Sbjct: 238 YMASMGSIASLVMAVVIN-----------GDTKLWGLVVCHHTSPRAVPFPLRYACEFLM 286
Query: 384 QVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALY 443
Q FG+Q+N EV+L+A+L EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALY
Sbjct: 287 QAFGLQLNMEVQLAARLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 346
Query: 444 YRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAV 503
Y G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYP A +LGDAVCG+AA
Sbjct: 347 YGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMAAA 406
Query: 504 KITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDV 563
+IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+V
Sbjct: 407 RITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENV 466
Query: 564 EMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVP 623
EMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRLIETA P
Sbjct: 467 EMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAP 526
Query: 624 ILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
ILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 527 ILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHAL 580
>gi|158513196|sp|A2XFW2.2|PHYB_ORYSI RecName: Full=Phytochrome B
Length = 1171
Score = 831 bits (2146), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/674 (61%), Positives = 509/674 (75%), Gaps = 23/674 (3%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA---LTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRNNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNISRGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 PGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAF 676
+S + V +LS A
Sbjct: 716 ESEETVNKLLSRAL 729
>gi|388458276|gb|AFK31004.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 831 bits (2146), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/674 (61%), Positives = 509/674 (75%), Gaps = 23/674 (3%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA---LTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRNNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 PGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAF 676
+S + V +LS A
Sbjct: 716 ESEETVNKLLSRAL 729
>gi|363547701|gb|AEW26893.1| phytochrome P [Encephalartos gratus]
Length = 582
Score = 830 bits (2145), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/594 (67%), Positives = 478/594 (80%), Gaps = 15/594 (2%)
Query: 84 IAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAAN 143
+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A +L+KAA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSALSLEKAAA 59
Query: 144 FGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAK 203
E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D + AGA++S KLA +
Sbjct: 60 AQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAATSVAGAVQSQKLAVR 117
Query: 204 AISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLG 263
AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR DLEPYLG
Sbjct: 118 AISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 264 FHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHAR 323
HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRAPHGCHA+
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHGCHAQ 237
Query: 324 YMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLI 383
YM +MGSIASLVM+V IN KLWGLVVCHHT PR VPFPLRYACEFL+
Sbjct: 238 YMASMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTPPRAVPFPLRYACEFLM 286
Query: 384 QVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALY 443
Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALY
Sbjct: 287 QAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 346
Query: 444 YRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAV 503
Y G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYP A +LGDAVCG+AA
Sbjct: 347 YGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMAAA 406
Query: 504 KITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDV 563
+IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+V
Sbjct: 407 RITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENV 466
Query: 564 EMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVP 623
EMDAIHSLQLILRGS QD ++K +++ D R+ +DEL + +EMVRLIETA P
Sbjct: 467 EMDAIHSLQLILRGSFQDIDDSETKTMIHSRLSDLRVRSMDELSSVASEMVRLIETATAP 526
Query: 624 ILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
ILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 527 ILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMEAVERLLHHAL 580
>gi|363547695|gb|AEW26890.1| phytochrome P [Encephalartos ferox]
Length = 582
Score = 830 bits (2145), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/589 (67%), Positives = 478/589 (81%), Gaps = 15/589 (2%)
Query: 84 IAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAAN 143
+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A +L+KAA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSALSLEKAAA 59
Query: 144 FGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAK 203
E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D + AGA++S KLA +
Sbjct: 60 AQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAATSVAGAVQSQKLAVR 117
Query: 204 AISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLG 263
AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR DLEPYLG
Sbjct: 118 AISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 264 FHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHAR 323
HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRAPHGCHA+
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHGCHAQ 237
Query: 324 YMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLI 383
YM +MGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLRYACEFL+
Sbjct: 238 YMASMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLRYACEFLM 286
Query: 384 QVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALY 443
Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALY
Sbjct: 287 QAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 346
Query: 444 YRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAV 503
Y G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYP A +LGDAVCG+AA
Sbjct: 347 YGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMAAA 406
Query: 504 KITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDV 563
+IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+V
Sbjct: 407 RITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENV 466
Query: 564 EMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVP 623
EMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRLIETA P
Sbjct: 467 EMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAP 526
Query: 624 ILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNM 671
ILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +
Sbjct: 527 ILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERL 575
>gi|388458248|gb|AFK30990.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458250|gb|AFK30991.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 830 bits (2144), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/674 (61%), Positives = 509/674 (75%), Gaps = 23/674 (3%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA---LTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEYVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRNNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNISRGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 PGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAF 676
+S + V +LS A
Sbjct: 716 ESEETVNKLLSRAL 729
>gi|122247122|sp|Q10MG9.1|PHYB_ORYSJ RecName: Full=Phytochrome B
gi|30578178|dbj|BAC76432.1| phytochrome B [Oryza sativa Japonica Group]
gi|57506674|dbj|BAD86669.1| phytochrome B [Oryza sativa Japonica Group]
gi|108707763|gb|ABF95558.1| Phytochrome B, putative, expressed [Oryza sativa Japonica Group]
gi|388458242|gb|AFK30987.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458278|gb|AFK31005.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458280|gb|AFK31006.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458284|gb|AFK31008.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 830 bits (2144), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/674 (61%), Positives = 509/674 (75%), Gaps = 23/674 (3%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA---LTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEYVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRNNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNISRGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 PGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAF 676
+S + V +LS A
Sbjct: 716 ESEETVNKLLSRAL 729
>gi|406685281|gb|AFS51081.1| phytochrome P, partial [Taxus baccata]
Length = 670
Score = 830 bits (2144), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/629 (65%), Positives = 491/629 (78%), Gaps = 19/629 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAP-----HAVPNI---EQQ 117
AYL R+QRG ++QPFGCM+AV+E +F ++ YSENA EML++ P +VPN+ E +
Sbjct: 1 AYLSRMQRGGILQPFGCMLAVEESSFKIIAYSENALEMLNITPPPSQSQSVPNMVGGESE 60
Query: 118 DALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVI 177
T+G D+R LFT S L++AA E++L NPI++ SGKPFYAI+HRIDVG+VI
Sbjct: 61 GIETIGSDIRRLFTPSSVRNLERAAMAQEISLTNPIVVD-SNSGKPFYAIVHRIDVGIVI 119
Query: 178 DLEPVNPDD----VPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGY 233
DLEPV D V G++ S +LA +A SRLQ++PSG+I LLCD +V EV +LTGY
Sbjct: 120 DLEPVRRGDAAALVSWGGGGSVPSQRLAVRATSRLQAVPSGDIGLLCDTVVEEVRELTGY 179
Query: 234 DRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAP 293
DRVMVYKFHEDEHGEVVAE RR DLEPYLG HYPATDIP+ASRFL M+N+VRMICDC A
Sbjct: 180 DRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPRASRFLFMQNRVRMICDCRAT 239
Query: 294 PVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ-- 351
PVKVIQ +L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V +N + D D
Sbjct: 240 PVKVIQSGELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIVNGNGNGNDEDGGG 299
Query: 352 ---EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRT 408
KLWGLVVCHHTSPR VPFPLR ACEFL+Q FG+Q+N E++L+AQL E +ILRT
Sbjct: 300 GSGRSSMKLWGLVVCHHTSPRAVPFPLRSACEFLMQTFGLQINMELQLAAQLIENNILRT 359
Query: 409 QTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLL 468
QT+LCDMLLRD+P+GI+TQ+P++MDLVKCDGAALYY G WLLGVTP E QIKDIAEWLL
Sbjct: 360 QTLLCDMLLRDAPIGILTQSPSIMDLVKCDGAALYYGGMCWLLGVTPMEAQIKDIAEWLL 419
Query: 469 EYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAK 528
E H STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLF FRSHTAKE+KWGGAK
Sbjct: 420 ECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFRFRSHTAKEMKWGGAK 479
Query: 529 HDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSK 588
H KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD D+K
Sbjct: 480 HHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSDTK 539
Query: 589 MIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTV 648
+V+ D +++ IDEL + +EMVRLIETA PILAVD+SG VNGWN+K ELTGL V
Sbjct: 540 TMVHAQLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSSGIVNGWNAKVGELTGLPV 599
Query: 649 DQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
+A+G +LV DLV +SV+ V+ ML A
Sbjct: 600 GEAMGKSLVHDLVFDESVETVEKMLYHAM 628
>gi|388458282|gb|AFK31007.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 830 bits (2144), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/674 (61%), Positives = 509/674 (75%), Gaps = 23/674 (3%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA---LTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEYVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRNNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNISRGSIPSAIKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 PGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAF 676
+S + V +LS A
Sbjct: 716 ESEETVNKLLSRAL 729
>gi|363547683|gb|AEW26884.1| phytochrome P [Encephalartos concinnus]
Length = 582
Score = 830 bits (2144), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/594 (67%), Positives = 479/594 (80%), Gaps = 15/594 (2%)
Query: 84 IAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAAN 143
+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A +L+KAA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSALSLEKAAA 59
Query: 144 FGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAK 203
E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D + AGA++S KLA +
Sbjct: 60 AQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAATSVAGAVQSQKLAVR 117
Query: 204 AISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLG 263
AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR DLEPYLG
Sbjct: 118 AISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 264 FHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHAR 323
HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRAPHGCHA+
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHGCHAQ 237
Query: 324 YMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLI 383
YM +MGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLRYACEFL+
Sbjct: 238 YMASMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLRYACEFLM 286
Query: 384 QVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALY 443
Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALY
Sbjct: 287 QAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 346
Query: 444 YRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAV 503
Y G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYP A +LGDAVCG+AA
Sbjct: 347 YGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMAAA 406
Query: 504 KITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDV 563
+IT+KDFLFWFRS TAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+V
Sbjct: 407 RITAKDFLFWFRSQTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENV 466
Query: 564 EMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVP 623
EMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRLIETA P
Sbjct: 467 EMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAP 526
Query: 624 ILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
ILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 527 ILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHAL 580
>gi|357112543|ref|XP_003558068.1| PREDICTED: phytochrome B-like [Brachypodium distachyon]
Length = 1181
Score = 830 bits (2143), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/673 (61%), Positives = 509/673 (75%), Gaps = 21/673 (3%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA L F++S FDYS S+ STS+ ++AYL R+QRG I
Sbjct: 69 SKAVAQYTLDAGLHAVFEQSGASGRSFDYSQSLLAPPSTSS--EQQIAAYLSRIQRGGHI 126
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA---LTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L +SENA ++LDL+PH +VP+++ A ++LG D R LF+
Sbjct: 127 QPFGCTLAVADDSSFRLLAFSENAADLLDLSPHHSVPSLDSSAAPPPVSLGADSRLLFSP 186
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 187 PSGVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 246
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVYKFH+DEHGEV+AE
Sbjct: 247 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYKFHDDEHGEVLAE 306
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR DLEPYLG HYPATDIPQASRFL +N+VRMI DC A PV+VIQD + QPL L GS
Sbjct: 307 SRRTDLEPYLGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPAMPQPLCLVGS 366
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEA-EDELDNDQ---EQGRKLWGLVVCHHTSP 368
TLR+PHGCHA+YM NMGSIASLVM+V I+ EDE + + KLWGLVVCHHTSP
Sbjct: 367 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGEDEHNMGRGAIPSAMKLWGLVVCHHTSP 426
Query: 369 RFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQT 428
R +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ+
Sbjct: 427 RCIPFPLRYACEFLMQAFGLQLNMELQLAYQLSEKHILRTQTLLCDMLLRDSPTGIVTQS 486
Query: 429 PNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYP 488
P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 487 PSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTVCHGDSTGLSTDSLADAGYS 546
Query: 489 GALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKA 548
GA ALGDAVCG+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFKA
Sbjct: 547 GATALGDAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKA 606
Query: 549 FLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKID 604
FLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IV+ V + + ID
Sbjct: 607 FLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAREGTSNSKAIVDGQVQLGELELRGID 666
Query: 605 ELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGD 663
EL + EMVRLIETA VPI AVD G +NGWN+K AELTGLTV++A+G +LV DL+ +
Sbjct: 667 ELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLTVEEAMGKSLVTDLIFKE 726
Query: 664 SVDVVKNMLSSAF 676
S ++V+ +LS A
Sbjct: 727 SEEIVEKLLSQAL 739
>gi|363547501|gb|AEW26794.1| phytochrome P [Cycas aculeata]
Length = 581
Score = 830 bits (2143), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/594 (67%), Positives = 479/594 (80%), Gaps = 16/594 (2%)
Query: 84 IAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAAN 143
+AV+E F ++ YSENA EMLDL P +VP +E + L LG DVRTLFT S AA+L+KAA
Sbjct: 1 LAVEEITFKIIAYSENAVEMLDLMPQSVPTMEHE-VLALGTDVRTLFTPSSAASLEKAAV 59
Query: 144 FGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAK 203
E++L+NPI + ++SGKPFYAI+HRIDVG+VID EP D ++ AGA++S KLA +
Sbjct: 60 AQEISLMNPIWMRSRSSGKPFYAIVHRIDVGMVIDFEPAG--DAAMSVAGAVQSQKLAVR 117
Query: 204 AISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLG 263
AISRLQ+LP G+I LLCD + +V +LTGYDRVMVYKFHEDEHGEVVAE RR DLEPYLG
Sbjct: 118 AISRLQALPGGDIGLLCDTVAEDVRELTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 264 FHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHAR 323
HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L+QPL L GSTLRA HGCH++
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQAAELNQPLCLVGSTLRAAHGCHSQ 237
Query: 324 YMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLI 383
YM NMGSIASLV++V IN KLWGLVVCHHTS R +PFP+RYACEFL+
Sbjct: 238 YMANMGSIASLVLAVIIN-----------ANVKLWGLVVCHHTSVRAIPFPVRYACEFLM 286
Query: 384 QVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALY 443
Q FG+Q+N E++L+AQ+ EKHILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALY
Sbjct: 287 QAFGLQLNMELQLAAQMTEKHILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 346
Query: 444 YRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAV 503
Y G WLLGVTPTE QIKDIA+WLLE H STGLSTDSL +AGYPG +LGDAVCG+AA
Sbjct: 347 YGGMFWLLGVTPTEAQIKDIADWLLECHGDSTGLSTDSLADAGYPGVASLGDAVCGMAAA 406
Query: 504 KITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDV 563
+ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+V
Sbjct: 407 RITSKDFLFWFRSHTAKEVKWGGAKHHPDDKD-GRRMHPRSSFKAFLEVVKRRSLPWENV 465
Query: 564 EMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVP 623
EMDAIHSLQLILRGS QD ++K +++ D R++ IDEL + +EMVRLIETA P
Sbjct: 466 EMDAIHSLQLILRGSFQDIDDSETKTMIHARLNDLRVQGIDELSSVASEMVRLIETATAP 525
Query: 624 ILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
ILAVD+ G VNGWN+K AELTGL V++A+G +LV +LV +SV+ V+ +L A
Sbjct: 526 ILAVDSGGLVNGWNAKVAELTGLPVEEAMGMSLVHNLVYEESVETVERLLYHAL 579
>gi|388458336|gb|AFK31034.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 830 bits (2143), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/674 (61%), Positives = 509/674 (75%), Gaps = 23/674 (3%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA---LTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ L+CD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLICDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 PGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAF 676
+S + V +LS A
Sbjct: 716 ESGETVNKLLSRAL 729
>gi|222624796|gb|EEE58928.1| hypothetical protein OsJ_10581 [Oryza sativa Japonica Group]
Length = 1128
Score = 829 bits (2142), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/674 (61%), Positives = 509/674 (75%), Gaps = 23/674 (3%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 16 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 73
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA---LTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 74 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 133
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 134 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 193
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 194 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEYVRELTGYDRVMVYRFHEDEHGEVVAE 253
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 254 SRRNNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 313
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 314 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNISRGSIPSAMKLWGLVVCHHTS 372
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 373 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 432
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 433 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 492
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 493 PGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 552
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 553 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 612
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 613 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 672
Query: 663 DSVDVVKNMLSSAF 676
+S + V +LS A
Sbjct: 673 ESEETVNKLLSRAL 686
>gi|388458324|gb|AFK31028.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 829 bits (2142), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/674 (61%), Positives = 508/674 (75%), Gaps = 23/674 (3%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA---LTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQ SRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQTSRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 PGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAF 676
+S + V +LS A
Sbjct: 716 ESEETVNKLLSRAL 729
>gi|156753023|gb|ABU94257.1| phytochrome P [Pinus sylvestris]
gi|156753027|gb|ABU94259.1| phytochrome P [Pinus sylvestris]
gi|156753029|gb|ABU94260.1| phytochrome P [Pinus sylvestris]
Length = 736
Score = 829 bits (2142), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/569 (70%), Positives = 470/569 (82%), Gaps = 3/569 (0%)
Query: 111 VPNIE--QQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAIL 168
VP++E QQD LT+G DVRTLFT++ A +L+KAA E++L+NPI +HCK S KPFYAI+
Sbjct: 1 VPSMEKPQQDVLTIGTDVRTLFTAASAHSLEKAAVAQEISLMNPIWVHCKNSRKPFYAIV 60
Query: 169 HRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVS 228
HRIDVG+VIDLEP+ D ++AAGA++S KLA +AISRLQSLP G++ LLCD +V V
Sbjct: 61 HRIDVGMVIDLEPLRTGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDVGLLCDTVVENVR 120
Query: 229 DLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMIC 288
+LTGYDRVMVYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMIC
Sbjct: 121 ELTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMIC 180
Query: 289 DCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD 348
DC+A PVKVIQ ++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN +DE
Sbjct: 181 DCMATPVKVIQSEELMQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIINGNDDEGG 240
Query: 349 NDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRT 408
KLWGLVVCHHTSPR VPFPLRYACEFL+Q G+Q+N E++L+AQL EKHILRT
Sbjct: 241 GSGRNSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQALGLQLNMELQLAAQLTEKHILRT 300
Query: 409 QTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLL 468
QT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G WLLGVTPTE QIKDIA+WLL
Sbjct: 301 QTLLCDMLLRDAPMGIVTQSPSIMDLVKCDGAALYYGGMCWLLGVTPTEAQIKDIADWLL 360
Query: 469 EYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAK 528
E+H STGLSTDSL +AGYPGA +LGDAVCG+A+ +ITSKDFLFWFRSHTAKE+KWGGAK
Sbjct: 361 EHHGDSTGLSTDSLADAGYPGAASLGDAVCGMASARITSKDFLFWFRSHTAKEMKWGGAK 420
Query: 529 HDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSK 588
H KD R+MHPRSSFKAFLEVVK+RSLPW++VE+DAIHSLQLILRGS QD +K
Sbjct: 421 HHPDDKDDARRMHPRSSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFQDIDDSGTK 480
Query: 589 MIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTV 648
+V+ D R++ IDEL + +EMVRLIETA PILAVD +G VNGWN+K AELTGL V
Sbjct: 481 TMVHSRLNDLRLQGIDELSSVASEMVRLIETATAPILAVDYNGLVNGWNAKVAELTGLPV 540
Query: 649 DQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
+A+G +LV DLV SV+ V+ ML +A
Sbjct: 541 GEAMGMSLVQDLVFEQSVERVEKMLHNAL 569
>gi|327241174|gb|AEA40431.1| phytochrome A [Triticum monococcum]
Length = 1130
Score = 829 bits (2142), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/672 (61%), Positives = 496/672 (73%), Gaps = 13/672 (1%)
Query: 18 RSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNISSSTSNV----PSSTVSAYLQRV 71
R RV AQT++DA+L +F+ES FDYS V T V S V AYLQ +
Sbjct: 15 RQSTQERVLAQTTLDAELNAEFEESSDSFDYSKLVEAQRDTPTVLQEGRSEKVIAYLQHI 74
Query: 72 QRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFT 131
QRG++IQ FGC++A+DE++F V+ +SENAPEML HAVP+++ L +G +VR+LFT
Sbjct: 75 QRGKMIQSFGCLLALDEKSFNVIAFSENAPEMLTTVSHAVPSVDDPPRLDIGTNVRSLFT 134
Query: 132 SSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTA 191
GA AL KA F +V+LLNPIL+ CKTSGKPFYAI+HR LV+D EPVNP + P TA
Sbjct: 135 DQGATALHKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVNPTEFPATA 194
Query: 192 AGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVA 251
AGAL+SYKLAAKAIS++Q+LP G++ LLC+ +V EV +LTGYDRVM YKFHED HGEV A
Sbjct: 195 AGALQSYKLAAKAISKIQALPGGSMELLCNTVVKEVFELTGYDRVMAYKFHEDNHGEVFA 254
Query: 252 ECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCG 311
E +P LEPYLG HYPATDIPQA+RFL MKNKVRMICD A +KVI+D+ L +SLCG
Sbjct: 255 EITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDVRARSLKVIEDEALPFDISLCG 314
Query: 312 STLRAPHGCHARYMENMGSIASLVMSVTINEAE--DELDND----QEQGRKLWGLVVCHH 365
S LRA H CH +YMENM SIASLVM+V +NE E DE+ ++ Q+Q + LWGL+VCHH
Sbjct: 315 SALRAAHSCHLQYMENMSSIASLVMAVVVNENEEDDEVGSEQPAQQQQKKILWGLIVCHH 374
Query: 366 TSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD-SPVGI 424
SPR+VPFPLRYACEFL QVF V VNKE E+ QLREK ILR QT+L DML ++ SP+ I
Sbjct: 375 ESPRYVPFPLRYACEFLAQVFAVHVNKEFEVQKQLREKSILRMQTILSDMLFKEASPLTI 434
Query: 425 VTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVE 484
V+ PN+MDL+KCDGAAL Y GK+W LG PT+ QI D+A WL E H STGLST+SL +
Sbjct: 435 VSGAPNIMDLIKCDGAALLYGGKVWRLGTAPTDSQIHDLALWLSEVHMDSTGLSTESLHD 494
Query: 485 AGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRS 544
AGYPGA ALGD VCG+A KI S D LFWFRS TAKEI+WGGAK+D D R+MHPR
Sbjct: 495 AGYPGASALGDTVCGMAVAKINSSDILFWFRSPTAKEIRWGGAKNDPSDMDDSRRMHPRL 554
Query: 545 SFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKID 604
SFKAFLEVVK +SL W D EMDAIHSLQLILRG++ V K ++ D +++ +
Sbjct: 555 SFKAFLEVVKMKSLAWTDSEMDAIHSLQLILRGAVDGVVKPTGKASLDEQIGDLKLDGLA 614
Query: 605 ELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDS 664
EL+ +T+EMVRL+ETA VPILAVD +G VNGWN KAAELTGL VD AIG ++ LV S
Sbjct: 615 ELQAVTSEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHILTLVEESS 674
Query: 665 VDVVKNMLSSAF 676
V VV+ ML A
Sbjct: 675 VSVVQRMLYLAL 686
>gi|388458346|gb|AFK31039.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 829 bits (2142), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/674 (61%), Positives = 508/674 (75%), Gaps = 23/674 (3%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA---LTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+V QD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVTQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 PGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAF 676
+S + V +LS A
Sbjct: 716 ESEETVNKLLSRAL 729
>gi|388458264|gb|AFK30998.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 829 bits (2142), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/674 (61%), Positives = 508/674 (75%), Gaps = 23/674 (3%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA---LTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEYVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRNNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRLPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNISRGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 PGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAF 676
+S + V +LS A
Sbjct: 716 ESEETVNKLLSRAL 729
>gi|388458262|gb|AFK30997.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 829 bits (2142), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/674 (61%), Positives = 508/674 (75%), Gaps = 23/674 (3%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA---LTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ +LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPASLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEYVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRNNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNISRGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 PGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAF 676
+S + V +LS A
Sbjct: 716 ESEETVNKLLSRAL 729
>gi|326516988|dbj|BAJ96486.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1168
Score = 829 bits (2142), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/673 (61%), Positives = 509/673 (75%), Gaps = 21/673 (3%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA L F++S FDYS S+ + S+ ++AYL R+QRG I
Sbjct: 56 SKAVAQYTLDAGLHAVFEQSGASGRSFDYSQSLLAPPTPSS--EQQIAAYLSRIQRGGHI 113
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA---LTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L +SENA ++LDL+PH +VP+++ A ++LG D R LF+
Sbjct: 114 QPFGCTLAVADDSSFRLLAFSENAADLLDLSPHHSVPSLDSSAAPPPVSLGADARLLFSP 173
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 174 SSGVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 233
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVYKFH+DEHGEV+AE
Sbjct: 234 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYKFHDDEHGEVLAE 293
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR DLEPYLG HYPATDIPQASRFL +N+VRMI DC A V+VIQD + QPL L GS
Sbjct: 294 SRRGDLEPYLGLHYPATDIPQASRFLFRQNRVRMIADCHAAAVRVIQDPAMPQPLCLVGS 353
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEA-EDELDNDQ---EQGRKLWGLVVCHHTSP 368
TLR+PHGCHA+YM NMGSIASLVM+V I+ EDE + + KLWGLVVCHHTSP
Sbjct: 354 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGEDEHNMTRGVIPSAMKLWGLVVCHHTSP 413
Query: 369 RFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQT 428
R +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ+
Sbjct: 414 RCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQS 473
Query: 429 PNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYP 488
P++MDLVKCDGAAL+Y GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGYP
Sbjct: 474 PSIMDLVKCDGAALFYHGKYYPLGVTPTEAQIKDIIEWLTVCHGDSTGLSTDSLADAGYP 533
Query: 489 GALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKA 548
GA ALGDAVCG+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFKA
Sbjct: 534 GATALGDAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKA 593
Query: 549 FLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKID 604
FLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + ID
Sbjct: 594 FLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAGEGTSNSKAIVNGQVQLGELELRGID 653
Query: 605 ELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGD 663
EL + EMVRLIETA VPI AVD G +NGWN+K AELTGLTV++A+G +L+ DL+ +
Sbjct: 654 ELSSVAREMVRLIETATVPIFAVDTYGCINGWNAKVAELTGLTVEEAMGKSLIKDLIFKE 713
Query: 664 SVDVVKNMLSSAF 676
S ++V+ +LS A
Sbjct: 714 SEEIVEKLLSQAL 726
>gi|62199070|gb|AAX76779.1| putative phytochrome B [Triticum aestivum]
Length = 1166
Score = 829 bits (2141), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/673 (61%), Positives = 509/673 (75%), Gaps = 21/673 (3%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA L F++S FDYS S+ + S+ ++AYL R+QRG I
Sbjct: 54 SKAVAQYTLDAGLHAVFEQSGASGRSFDYSQSLLAPPTPSS--EQQIAAYLSRIQRGGHI 111
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA---LTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L +SENA ++LDL+PH +VP+++ A ++LG D R LF+
Sbjct: 112 QPFGCTLAVADDSSFRLLAFSENAADLLDLSPHHSVPSLDSSAAPPPVSLGADARLLFSP 171
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 172 SSGVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 231
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVYKFH+DEHGEV+AE
Sbjct: 232 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYKFHDDEHGEVLAE 291
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR DLEPYLG HYPATDIPQASRFL +N+VRMI DC A V+VIQD + QPL L GS
Sbjct: 292 SRRGDLEPYLGLHYPATDIPQASRFLFRQNRVRMIADCHAAAVRVIQDPAMPQPLCLVGS 351
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEA-EDELDNDQ---EQGRKLWGLVVCHHTSP 368
TLR+PHGCHA+YM NMGSIASLVM+V I+ EDE + + KLWGLVVCHHTSP
Sbjct: 352 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGEDEHNMTRGVIPSAMKLWGLVVCHHTSP 411
Query: 369 RFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQT 428
R +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKH+LRTQT+LCDMLLRDSP GIVTQ+
Sbjct: 412 RCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHMLRTQTLLCDMLLRDSPTGIVTQS 471
Query: 429 PNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYP 488
P++MDLVKCDGAAL+Y GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGYP
Sbjct: 472 PSIMDLVKCDGAALFYHGKYYPLGVTPTEAQIKDIIEWLTVCHGDSTGLSTDSLADAGYP 531
Query: 489 GALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKA 548
GA ALGDAVCG+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFKA
Sbjct: 532 GATALGDAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKA 591
Query: 549 FLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKID 604
FLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + ID
Sbjct: 592 FLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAGEGTSNSKAIVNGQVQLGELELRGID 651
Query: 605 ELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGD 663
EL + EMVRLIETA VPI AVD G +NGWN+K AELTGLTV++A+G +LV DL+ +
Sbjct: 652 ELSSVAREMVRLIETATVPIFAVDTYGCINGWNAKVAELTGLTVEEAMGKSLVKDLIFKE 711
Query: 664 SVDVVKNMLSSAF 676
S ++V+ +LS A
Sbjct: 712 SEEIVEKLLSQAL 724
>gi|77963960|gb|ABB13322.1| phytochrome A [Hordeum vulgare subsp. vulgare]
Length = 1130
Score = 829 bits (2141), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/672 (61%), Positives = 498/672 (74%), Gaps = 13/672 (1%)
Query: 18 RSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSNV----PSSTVSAYLQRV 71
R RV AQT++DA+L +F+ES FDYS V T V S V AYLQ +
Sbjct: 15 RQSTQERVLAQTTLDAELNAEFEESSDSFDYSKLVEAQRDTPTVLQEGRSEKVIAYLQHI 74
Query: 72 QRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFT 131
QRG++IQ FGC++A+DE++F V+ +SENAPEML HAVP+++ L +G +VR+LFT
Sbjct: 75 QRGKMIQSFGCLLALDEKSFNVIAFSENAPEMLTTVSHAVPSVDDPPRLDIGTNVRSLFT 134
Query: 132 SSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTA 191
GA AL KA F +V+LLNPIL+ CKTSGKPFYAI+HR LV+D EPVNP + P TA
Sbjct: 135 EQGATALHKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVNPTEFPATA 194
Query: 192 AGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVA 251
AGAL+SYKLAAKAIS++Q+LP G++ LLC+ +V EV +LTGYDRVM YKFHED HGEV A
Sbjct: 195 AGALQSYKLAAKAISKIQALPGGSMELLCNTVVKEVFELTGYDRVMAYKFHEDNHGEVFA 254
Query: 252 ECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCG 311
E +P LEPYLG HYPATDIPQA+RFL MKNKVRMICD A +KVI+D+ L +SLCG
Sbjct: 255 EITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDVRARTLKVIEDEALPFDISLCG 314
Query: 312 STLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN------DQEQGRKLWGLVVCHH 365
S+LRA H CH +YMENM SIASLVM+V +NE+E++ + Q++ + LWGLVVCHH
Sbjct: 315 SSLRAAHSCHLQYMENMNSIASLVMAVVVNESEEDDEAESEQPAQQQKKKILWGLVVCHH 374
Query: 366 TSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD-SPVGI 424
SPR+VPFPLRYACEFL QVF V VNKE E+ QLREK ILR QT+L DML ++ SP+ I
Sbjct: 375 ESPRYVPFPLRYACEFLAQVFAVHVNKEFEVQKQLREKSILRMQTILSDMLFKEASPLTI 434
Query: 425 VTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVE 484
V+ TPN+MDL+KCDGAAL Y K+W LG PTE QI+ IA WL E H STGLST+SL +
Sbjct: 435 VSGTPNIMDLIKCDGAALLYGDKVWRLGNAPTESQIRHIALWLSEVHMDSTGLSTESLHD 494
Query: 485 AGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRS 544
AGYPGA ALGD VCGIA KI S D LFWFRSHTA+EI+WGGAK+D +D R+MHPR
Sbjct: 495 AGYPGASALGDMVCGIAVAKINSNDILFWFRSHTAEEIRWGGAKNDPSDQDDSRRMHPRL 554
Query: 545 SFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKID 604
SFKAFLEVVK +SL W D EMDAIHSLQLILRG+L D K ++ D +++ I
Sbjct: 555 SFKAFLEVVKMKSLAWSDYEMDAIHSLQLILRGALDDVAKPTGKASLDEQIGDLKLDGIA 614
Query: 605 ELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDS 664
EL+ +T+EMVRL+ETA VPILAVD +G VNGWN KAAELTGL VD AIG ++ LV S
Sbjct: 615 ELQAVTSEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHILTLVEESS 674
Query: 665 VDVVKNMLSSAF 676
V VV+ ML A
Sbjct: 675 VPVVQRMLYLAL 686
>gi|388458232|gb|AFK30982.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 829 bits (2141), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/674 (61%), Positives = 509/674 (75%), Gaps = 23/674 (3%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA---LTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LD++PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDVSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEYVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRNNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNISRGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 PGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAF 676
+S + V +LS A
Sbjct: 716 ESEETVNKLLSRAL 729
>gi|406685293|gb|AFS51087.1| phytochrome P, partial [Taxus fuana]
Length = 670
Score = 828 bits (2140), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/629 (65%), Positives = 489/629 (77%), Gaps = 19/629 (3%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAP-----HAVPNI---EQQ 117
AYL R+QRG ++QPFGCM+AV+E +F ++ YSENA EML++ P +VPN+ E +
Sbjct: 1 AYLSRMQRGGILQPFGCMLAVEESSFKIIAYSENALEMLNITPPPSQSQSVPNMVGGESE 60
Query: 118 DALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVI 177
T+G D+R LFT S L++AA E++L NPI++ SGKPFYAI+HRIDVG+VI
Sbjct: 61 GIETIGSDIRRLFTPSSVRNLERAAMAQEISLTNPIVVD-SNSGKPFYAIVHRIDVGIVI 119
Query: 178 DLEPVNPDD----VPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGY 233
DLEPV D V G++ S +LA +A SRLQ++PSG+I LLCD +V EV +LTGY
Sbjct: 120 DLEPVRRGDAAALVSWGGGGSVPSQRLAVRATSRLQAVPSGDIGLLCDTVVEEVRELTGY 179
Query: 234 DRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAP 293
DRVMVYKFHEDE GEVVAE RR DLEPYLG HYPATDIPQASRFL M+ +VRMICDC A
Sbjct: 180 DRVMVYKFHEDERGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQTRVRMICDCRAT 239
Query: 294 PVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ-- 351
PVKVIQ +L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V +N + D D
Sbjct: 240 PVKVIQSGELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIVNGNGNGNDEDGGG 299
Query: 352 ---EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRT 408
KLWGLVVCHHTSPR VPFPLR ACEFL+Q FG+Q+N E++L+AQL E +ILRT
Sbjct: 300 GSGRSSMKLWGLVVCHHTSPRAVPFPLRSACEFLMQTFGLQINMELQLAAQLIENNILRT 359
Query: 409 QTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLL 468
QT+LCDMLLRD+P+GI+TQ+P++MDLVKC+GAALYY G WLLGVTP E QIKDIAEWLL
Sbjct: 360 QTLLCDMLLRDAPIGILTQSPSIMDLVKCEGAALYYGGMCWLLGVTPMEAQIKDIAEWLL 419
Query: 469 EYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAK 528
E H STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAK
Sbjct: 420 ECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAK 479
Query: 529 HDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSK 588
H KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD D+K
Sbjct: 480 HHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSDTK 539
Query: 589 MIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTV 648
+V+ D +++ IDEL + +EMVRLIETA PILAVD+SG VNGWN+K ELTGL V
Sbjct: 540 TMVHARLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSSGIVNGWNAKVGELTGLPV 599
Query: 649 DQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
+A+G +LV DLV +SV V+ ML A
Sbjct: 600 GEAMGKSLVHDLVFDESVKTVEKMLYHAM 628
>gi|388458244|gb|AFK30988.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 828 bits (2139), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/674 (61%), Positives = 508/674 (75%), Gaps = 23/674 (3%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA---LTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRL +LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLHALPGGDVKLLCDTVVEYVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRNNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNISRGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 PGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAF 676
+S + V +LS A
Sbjct: 716 ESEETVNKLLSRAL 729
>gi|388458254|gb|AFK30993.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 828 bits (2139), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/674 (61%), Positives = 508/674 (75%), Gaps = 23/674 (3%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA---LTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRL +LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLHALPGGDVKLLCDTVVEYVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRNNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNISRGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 PGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAF 676
+S + V +LS A
Sbjct: 716 ESEETVNKLLSRAL 729
>gi|388458304|gb|AFK31018.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 828 bits (2138), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/674 (61%), Positives = 508/674 (75%), Gaps = 23/674 (3%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA---LTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAIQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
GA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 SGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAF 676
+S + V +LS A
Sbjct: 716 ESEETVNKLLSRAL 729
>gi|388458258|gb|AFK30995.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 828 bits (2138), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/674 (61%), Positives = 508/674 (75%), Gaps = 23/674 (3%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA---LTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSILSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
GA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 SGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAF 676
+S + V +LS A
Sbjct: 716 ESEETVNKLLSRAL 729
>gi|388458318|gb|AFK31025.1| phytochrome b, partial [Oryza nivara]
Length = 1171
Score = 828 bits (2138), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/674 (61%), Positives = 508/674 (75%), Gaps = 23/674 (3%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA---LTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRRIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
GA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 SGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAF 676
+S + V +LS A
Sbjct: 716 ESEETVNKLLSRAL 729
>gi|388458316|gb|AFK31024.1| phytochrome b, partial [Oryza nivara]
Length = 1171
Score = 828 bits (2138), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/674 (61%), Positives = 508/674 (75%), Gaps = 23/674 (3%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA---LTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
GA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 SGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAF 676
+S + V +LS A
Sbjct: 716 ESEETVNKLLSRAL 729
>gi|388458212|gb|AFK30972.1| phytochrome b, partial [Oryza sativa Indica Group]
Length = 1171
Score = 828 bits (2138), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/674 (61%), Positives = 508/674 (75%), Gaps = 23/674 (3%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA---LTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
GA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 SGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAF 676
+S + V +LS A
Sbjct: 716 ESEETVNKLLSRAL 729
>gi|388458230|gb|AFK30981.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458288|gb|AFK31010.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458292|gb|AFK31012.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458294|gb|AFK31013.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458296|gb|AFK31014.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458300|gb|AFK31016.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458306|gb|AFK31019.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458364|gb|AFK31048.1| phytochrome b, partial [Oryza rufipogon]
gi|388458372|gb|AFK31052.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 828 bits (2138), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/674 (61%), Positives = 508/674 (75%), Gaps = 23/674 (3%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA---LTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
GA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 SGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAF 676
+S + V +LS A
Sbjct: 716 ESEETVNKLLSRAL 729
>gi|13383432|gb|AAK20979.1| phytochrome C [Pleea tenuifolia]
Length = 554
Score = 827 bits (2137), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/507 (79%), Positives = 446/507 (87%), Gaps = 9/507 (1%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAIS+LQSLP+GNISLLCDVLV EVSDLTGYDRV+
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKAISKLQSLPTGNISLLCDVLVREVSDLTGYDRVV 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFHEDEHGEV+AECRR +LEPYLG HYPATDIP+ASRFL MKNKVRMICDC A PVKV
Sbjct: 61 AYKFHEDEHGEVIAECRRSELEPYLGLHYPATDIPRASRFLFMKNKVRMICDCSAAPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ-EQGRK 356
IQDK+L QPLSLCGS LRAPHGCHA+YM +MGS+ASLVMSVTI E ++E +DQ E+GRK
Sbjct: 121 IQDKRLAQPLSLCGSILRAPHGCHAQYMASMGSVASLVMSVTIIEDDNETGSDQQEKGRK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWG+VVCHHTSPRF+PFPLRYACEFLIQVF +Q+ KEVEL+ Q+REKHIL+TQTVLCDML
Sbjct: 181 LWGVVVCHHTSPRFIPFPLRYACEFLIQVFCMQLTKEVELADQMREKHILQTQTVLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PVGI TQ+PNVMDLVKCDGAALYYR + WLLG++P E QI+DIA WLLEYH G+TG
Sbjct: 241 LRDAPVGIFTQSPNVMDLVKCDGAALYYRNQFWLLGISPREAQIRDIAGWLLEYHDGTTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL++AGYPGA ALGD VCG+AA++IT KDFLFWFRSHTAKE WGGAKHD KD
Sbjct: 301 LSTDSLLDAGYPGASALGDEVCGMAAIRITDKDFLFWFRSHTAKEXTWGGAKHDLVEKDS 360
Query: 537 -GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAE-DSKMIVNVP 594
GRKMHPRSSFKAFLEVV+ RSLPWEDVEMDAIHSLQLILR SLQ E A DSK IVN P
Sbjct: 361 DGRKMHPRSSFKAFLEVVEGRSLPWEDVEMDAIHSLQLILRDSLQGERASIDSKAIVNAP 420
Query: 595 SVDD--RIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
+DD +I+ +DEL ++TNEM+RLIETAAVPILAVD GNVNGWN KAAELTGL V QAI
Sbjct: 421 -LDDAKKIQGMDELSLVTNEMIRLIETAAVPILAVDVLGNVNGWNIKAAELTGLVVQQAI 479
Query: 653 GTALVDLVAGDSVDVVKNMLSSAFLAI 679
G L+DLV GDS+DV KNML FLA+
Sbjct: 480 GMPLIDLVEGDSIDVAKNML---FLAL 503
>gi|388458216|gb|AFK30974.1| phytochrome b, partial [Oryza sativa Indica Group]
gi|388458218|gb|AFK30975.1| phytochrome b, partial [Oryza sativa Indica Group]
gi|388458220|gb|AFK30976.1| phytochrome b, partial [Oryza sativa Indica Group]
gi|388458260|gb|AFK30996.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458268|gb|AFK31000.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 827 bits (2137), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/674 (61%), Positives = 508/674 (75%), Gaps = 23/674 (3%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA---LTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
GA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 SGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAF 676
+S + V +LS A
Sbjct: 716 ESEETVNKLLSRAL 729
>gi|297600820|ref|NP_001049910.2| Os03g0309200 [Oryza sativa Japonica Group]
gi|255674454|dbj|BAF11824.2| Os03g0309200, partial [Oryza sativa Japonica Group]
Length = 1120
Score = 827 bits (2137), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/673 (61%), Positives = 507/673 (75%), Gaps = 23/673 (3%)
Query: 24 RVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLIQ 78
R Q ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG IQ
Sbjct: 9 RTHPQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHIQ 66
Query: 79 PFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA---LTLGIDVRTLFTSS 133
PFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF S
Sbjct: 67 PFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAPS 126
Query: 134 GAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAG 193
A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ AG
Sbjct: 127 SAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAG 186
Query: 194 ALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAEC 253
A++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 187 AVQSQKLAVRAISRLQALPGGDVKLLCDTVVEYVRELTGYDRVMVYRFHEDEHGEVVAES 246
Query: 254 RRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGST 313
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GST
Sbjct: 247 RRNNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGST 306
Query: 314 LRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTSP 368
LR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTSP
Sbjct: 307 LRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNISRGSIPSAMKLWGLVVCHHTSP 365
Query: 369 RFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQT 428
R +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ+
Sbjct: 366 RCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQS 425
Query: 429 PNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYP 488
P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGYP
Sbjct: 426 PSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGYP 485
Query: 489 GALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKA 548
GA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFKA
Sbjct: 486 GAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKA 545
Query: 549 FLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKID 604
FLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + ID
Sbjct: 546 FLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGID 605
Query: 605 ELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGD 663
EL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+ +
Sbjct: 606 ELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKE 665
Query: 664 SVDVVKNMLSSAF 676
S + V +LS A
Sbjct: 666 SEETVNKLLSRAL 678
>gi|406685263|gb|AFS51072.1| phytochrome P, partial [Amentotaxus formosana]
Length = 676
Score = 827 bits (2137), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/637 (64%), Positives = 489/637 (76%), Gaps = 29/637 (4%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHA--VPNIEQQDA---- 119
AYL R+QRG IQPFGCM+AV+E +F ++ YSENA EMLD+ PH+ V N+E +
Sbjct: 1 AYLSRMQRGGSIQPFGCMLAVEETSFKIIAYSENALEMLDVMPHSHSVSNMEGRGGDSDG 60
Query: 120 -LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
LT+G D+R LFT S L++AA E++L NPI + SGKPFYAI+HRIDVG+VID
Sbjct: 61 FLTIGSDMRRLFTPSSGRNLERAAMAQEISLTNPIAME-SNSGKPFYAIVHRIDVGMVID 119
Query: 179 LEPVNPDDVPVTAAGA-------LKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLT 231
LEPV D + A + S +LA +A SRLQS+PSG+I LLCD +V EV +LT
Sbjct: 120 LEPVRRGDAAALVSWAGGGGGGTVPSQRLAVRATSRLQSVPSGDIGLLCDTVVEEVRELT 179
Query: 232 GYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCL 291
GYDRVMVYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC
Sbjct: 180 GYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCC 239
Query: 292 APPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ 351
A PVKV Q ++L QPL L GSTLRAPHGCH++YM NMGSIASLVM+V +N + +D D
Sbjct: 240 ATPVKVKQAEELKQPLCLVGSTLRAPHGCHSQYMANMGSIASLVMAVIVNG--NGIDEDG 297
Query: 352 EQGR-----------KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQL 400
G KLWGLVVCHHTSPR VPFPLR ACEFL+Q FG+Q+N E++L+AQL
Sbjct: 298 VSGSESGSGSGRSSIKLWGLVVCHHTSPRAVPFPLRSACEFLMQTFGLQINMELQLAAQL 357
Query: 401 REKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQI 460
E ILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G WLLGVTPTE Q+
Sbjct: 358 IENSILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGMFWLLGVTPTEAQL 417
Query: 461 KDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAK 520
KDIA+WLLE H STGLSTDSL +AGYP A +LGDAVCG+AA +IT KDFLFWFRSHTAK
Sbjct: 418 KDIADWLLECHGDSTGLSTDSLADAGYPSAASLGDAVCGMAAARITLKDFLFWFRSHTAK 477
Query: 521 EIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQ 580
E+KWGGAKH KD GR+MHPRSSFKAFLEVVK+RS PWE+VEMDAIHSLQLILRGS Q
Sbjct: 478 EMKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSFPWENVEMDAIHSLQLILRGSFQ 537
Query: 581 DEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKA 640
D D+K +V+ D +++ IDEL + +EMVRLIETA PILAVD+SG VNGWN+K
Sbjct: 538 DIDDSDTKTMVHARLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSSGIVNGWNAKV 597
Query: 641 AELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
ELTGL V +A+G +LV DLV +S++ V+ ML A
Sbjct: 598 GELTGLPVGEAMGKSLVHDLVFEESIETVEKMLYHAL 634
>gi|388458374|gb|AFK31053.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 827 bits (2137), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/674 (61%), Positives = 508/674 (75%), Gaps = 23/674 (3%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA---LTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
GA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 SGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAF 676
+S + V +LS A
Sbjct: 716 ESEETVNKLLSRAL 729
>gi|388458312|gb|AFK31022.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 827 bits (2137), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/674 (61%), Positives = 509/674 (75%), Gaps = 23/674 (3%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA---LTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN +++DL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCPLAVADDSSFRLLAYSENTADLVDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSADLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEYVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRNNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNISRGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 PGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAF 676
+S + V +LS A
Sbjct: 716 ESEETVNKLLSRAL 729
>gi|363547703|gb|AEW26894.1| phytochrome P [Encephalartos hildebrandtii]
Length = 582
Score = 827 bits (2137), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/594 (67%), Positives = 478/594 (80%), Gaps = 15/594 (2%)
Query: 84 IAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAAN 143
+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A +L+KAA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSALSLEKAAA 59
Query: 144 FGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAK 203
E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D + AGA++S KLA +
Sbjct: 60 AQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAATSVAGAVQSQKLAVR 117
Query: 204 AISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLG 263
AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR DLEPYLG
Sbjct: 118 AISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 264 FHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHAR 323
HYPATDIPQASRFL M+N+VR ICDC A PV+VIQ +L QPL L GSTLRAPHGCHA+
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRTICDCRATPVRVIQAAELRQPLCLVGSTLRAPHGCHAQ 237
Query: 324 YMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLI 383
YM +MGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLRYACEFL+
Sbjct: 238 YMASMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLRYACEFLM 286
Query: 384 QVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALY 443
Q FG+Q+N EV+L+AQL EK IL+ QT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALY
Sbjct: 287 QAFGLQLNMEVQLAAQLTEKRILKIQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 346
Query: 444 YRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAV 503
Y G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYP A +LGDAVCG+AA
Sbjct: 347 YGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMAAA 406
Query: 504 KITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDV 563
+IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+V
Sbjct: 407 RITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENV 466
Query: 564 EMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVP 623
EMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRLIETA P
Sbjct: 467 EMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAP 526
Query: 624 ILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
ILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 527 ILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHAL 580
>gi|388458350|gb|AFK31041.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 827 bits (2137), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/674 (61%), Positives = 508/674 (75%), Gaps = 23/674 (3%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA---LTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM +MGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMADMGSIASLVMAVIISSGGDD-DHNIARGSVPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 PGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAF 676
+S + V +L A
Sbjct: 716 ESEETVNKLLPRAL 729
>gi|388458246|gb|AFK30989.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 827 bits (2137), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/674 (61%), Positives = 507/674 (75%), Gaps = 23/674 (3%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F +S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFGQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA---LTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHR+DVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRVDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA +S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAAQSQKLAVRAISRLQALPGGDVKLLCDTVVEYVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRNNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNISRGSILSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 PGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAF 676
+S + V +LS A
Sbjct: 716 ESEETVNKLLSRAL 729
>gi|388458236|gb|AFK30984.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458286|gb|AFK31009.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458310|gb|AFK31021.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 827 bits (2137), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/674 (61%), Positives = 508/674 (75%), Gaps = 23/674 (3%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA---LTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
GA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 SGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAF 676
+S + V +LS A
Sbjct: 716 ESEETVNKLLSRAL 729
>gi|57791666|gb|AAW56601.1| phytochrome D [Arabidopsis thaliana]
Length = 1164
Score = 827 bits (2136), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/663 (60%), Positives = 497/663 (74%), Gaps = 14/663 (2%)
Query: 28 QTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLIQPFGC 82
Q ++DA+L F++S FDYS S+ + S+VP ++AYL R+QRG QPFGC
Sbjct: 62 QYTVDARLHAVFEQSGESGKSFDYSQSLKTAPYDSSVPEQQITAYLSRIQRGGYTQPFGC 121
Query: 83 MIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-QQDALTLGIDVRTLFTSSGAAALQKA 141
+IAV+E FT++GYSENA EML L +VP+IE + + LT+G D+R+LF SS L++A
Sbjct: 122 LIAVEESTFTIIGYSENAREMLGLMSQSVPSIEDKSEVLTIGTDLRSLFKSSSYLLLERA 181
Query: 142 ANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLA 201
E+ LLNPI IH +GKPFYAILHR+DVG++IDLEP +D ++ AGA++S KLA
Sbjct: 182 FVAREITLLNPIWIHSNNTGKPFYAILHRVDVGILIDLEPARTEDPALSIAGAVQSQKLA 241
Query: 202 AKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPY 261
+AIS LQSLPSG+I LLCD +V V DLTGYDRVMVYKFHEDEHGEVVAE +R DLEPY
Sbjct: 242 VRAISHLQSLPSGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRNDLEPY 301
Query: 262 LGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCH 321
+G HYPATDIPQASRFL +N+VRMI DC A PV+V+QD +L Q + L GSTLRAPHGCH
Sbjct: 302 IGLHYPATDIPQASRFLFKQNRVRMIVDCYASPVRVVQDDRLTQSICLVGSTLRAPHGCH 361
Query: 322 ARYMENMGSIASLVMSVTINEAEDELDNDQEQGR---KLWGLVVCHHTSPRFVPFPLRYA 378
A+YM NMGSIASL M+V IN E++ + GR +LWGLVVCHHTS R +PFPLRYA
Sbjct: 362 AQYMTNMGSIASLAMAVIINGNEEDGNGVNTGGRNSMRLWGLVVCHHTSARCIPFPLRYA 421
Query: 379 CEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCD 438
CEFL+Q FG+Q+N E++L+ Q+ EK +LR QT+LCDMLLRDSP GIVTQ P++MDLVKC+
Sbjct: 422 CEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLCDMLLRDSPAGIVTQRPSIMDLVKCN 481
Query: 439 GAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVC 498
GAA Y+GK + LGVTPT+ QI DI EWLL H STGLSTDSL +AGYP A ALGDAVC
Sbjct: 482 GAAFLYQGKYYSLGVTPTDSQINDIVEWLLANHSDSTGLSTDSLGDAGYPRAAALGDAVC 541
Query: 499 GIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSL 558
G+A IT +DFLFWFRSHT KEIKWGGAKH KD G++M+PRSSF+AFLEVVK R
Sbjct: 542 GMAVACITKRDFLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMNPRSSFQAFLEVVKSRCQ 601
Query: 559 PWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVN---VPSVDDRIEK-IDELRIITNEMV 614
PWE EMDAIHSLQLILR S ++ A DSK P DD +++ + E+ + EMV
Sbjct: 602 PWETAEMDAIHSLQLILRDSFKESEAMDSKAAAAGAVQPHGDDMVQQGMQEIGAVAREMV 661
Query: 615 RLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLS 673
RLIETA VPI AVD G +NGWN+K AELTGL+V+ A+G +LV +L++ + + V +LS
Sbjct: 662 RLIETATVPIFAVDIDGCINGWNAKIAELTGLSVEDALGKSLVRELISKEYKETVDRLLS 721
Query: 674 SAF 676
SA
Sbjct: 722 SAL 724
>gi|388458270|gb|AFK31001.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 827 bits (2136), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/674 (61%), Positives = 508/674 (75%), Gaps = 23/674 (3%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA---LTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN +MLDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADMLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G +LWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMELWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNIELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
GA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 SGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAF 676
+S + V +LS A
Sbjct: 716 ESEETVNKLLSRAL 729
>gi|77963956|gb|ABB13320.1| phytochrome A [Hordeum vulgare subsp. vulgare]
gi|77963958|gb|ABB13321.1| phytochrome A [Hordeum vulgare subsp. vulgare]
Length = 1130
Score = 827 bits (2135), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/672 (61%), Positives = 498/672 (74%), Gaps = 13/672 (1%)
Query: 18 RSKQNARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSNV----PSSTVSAYLQRV 71
R R+ AQT++DA+L +F+ES FDYS V T V S V AYLQ +
Sbjct: 15 RQSTQERMLAQTTLDAELNAEFEESSDSFDYSKLVEAQRDTPTVLQEGRSEKVIAYLQHI 74
Query: 72 QRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFT 131
QRG++IQ FGC++A+DE++F ++ +SENAPEML HAVP+++ L +G +VR+LFT
Sbjct: 75 QRGKMIQSFGCLLALDEKSFNLIAFSENAPEMLTTVSHAVPSVDDPPRLDIGTNVRSLFT 134
Query: 132 SSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTA 191
GA AL KA F +V+LLNPIL+ CKTSGKPFYAI+HR LV+D EPVNP + P TA
Sbjct: 135 EQGATALHKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVNPTEFPATA 194
Query: 192 AGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVA 251
AGAL+SYKLAAKAIS++Q+LP G++ LLC+ +V EV +LTGYDRVM YKFHED HGEV A
Sbjct: 195 AGALQSYKLAAKAISKIQALPGGSMELLCNTVVKEVFELTGYDRVMAYKFHEDNHGEVFA 254
Query: 252 ECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCG 311
E +P LEPYLG HYPATDIPQA+RFL MKNKVRMICD A +KVI+D+ L +SLCG
Sbjct: 255 EITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDVRARTLKVIEDEALPFDISLCG 314
Query: 312 STLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN------DQEQGRKLWGLVVCHH 365
S+LRA H CH +YMENM SIASLVM+V +NE+E++ + Q++ + LWGLVVCHH
Sbjct: 315 SSLRAAHSCHLQYMENMNSIASLVMAVVVNESEEDDEAESEQPAQQQKKKILWGLVVCHH 374
Query: 366 TSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD-SPVGI 424
SPR+VPFPLRYACEFL QVF V VNKE E+ QLREK ILR QT+L DML ++ SP+ I
Sbjct: 375 ESPRYVPFPLRYACEFLAQVFAVHVNKEFEVQKQLREKSILRMQTILSDMLFKEASPLTI 434
Query: 425 VTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVE 484
V+ TPN+MDL+KCDGAAL Y K+W LG PTE QI+ IA WL E H STGLST+SL +
Sbjct: 435 VSGTPNIMDLIKCDGAALLYGDKVWRLGNAPTESQIRHIALWLSEVHMDSTGLSTESLHD 494
Query: 485 AGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRS 544
AGYPGA ALGD VCGIA KI S D LFWFRSHTA+EI+WGGAK+D +D R+MHPR
Sbjct: 495 AGYPGASALGDMVCGIAVAKINSNDILFWFRSHTAEEIRWGGAKNDPSDQDDSRRMHPRL 554
Query: 545 SFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKID 604
SFKAFLEVVK +SL W D EMDAIHSLQLILRG+L D K ++ D +++ I
Sbjct: 555 SFKAFLEVVKMKSLAWSDYEMDAIHSLQLILRGALDDVAKPTGKASLDEQIGDLKLDGIA 614
Query: 605 ELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDS 664
EL+ +T+EMVRL+ETA VPILAVD +G VNGWN KAAELTGL VD AIG ++ LV S
Sbjct: 615 ELQAVTSEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHILTLVEESS 674
Query: 665 VDVVKNMLSSAF 676
V VV+ ML A
Sbjct: 675 VPVVQRMLYLAL 686
>gi|388458210|gb|AFK30971.1| phytochrome b, partial [Oryza sativa Indica Group]
Length = 1171
Score = 827 bits (2135), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/674 (61%), Positives = 507/674 (75%), Gaps = 23/674 (3%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA---LTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVV E
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVTE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEAQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
GA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 SGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAF 676
+S + V +LS A
Sbjct: 716 ESEETVNKLLSRAL 729
>gi|388458366|gb|AFK31049.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 827 bits (2135), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/674 (61%), Positives = 507/674 (75%), Gaps = 23/674 (3%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA---LTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+V DLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVTDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FH DEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHGDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRRNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 PGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAF 676
+S + V +LS A
Sbjct: 716 ESEETVNKLLSRAL 729
>gi|327241180|gb|AEA40434.1| phytochrome A type 2 [Triticum aestivum]
Length = 889
Score = 827 bits (2135), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/666 (61%), Positives = 497/666 (74%), Gaps = 13/666 (1%)
Query: 24 RVAAQTSIDAKLAEDFDESD--FDYSTSVNISSSTSNV----PSSTVSAYLQRVQRGRLI 77
RV AQT++DA+L +F+ES FDYS V T V S V AYLQ +QRG++I
Sbjct: 21 RVLAQTTLDAQLNAEFEESSDSFDYSKLVEAQRDTPTVLQEGRSEKVIAYLQHIQRGKMI 80
Query: 78 QPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAA 137
Q FGC++A+DE++F V+ +SENAPEML HAVP++ L +G +VR+LFT GA A
Sbjct: 81 QSFGCLLALDEKSFNVIAFSENAPEMLTTVSHAVPSVNDPPRLDIGTNVRSLFTDQGATA 140
Query: 138 LQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKS 197
L KA F +V+LLNPIL+ CKTSGKPFYAI+HR L +D EPVNP + P +AAGAL+S
Sbjct: 141 LHKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLAVDFEPVNPTEFPASAAGALQS 200
Query: 198 YKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPD 257
YKLAAKAIS++Q+LP G+I LLC+ +V EV +LTGYDRVM YKFHED HGEV AE +P
Sbjct: 201 YKLAAKAISKIQALPGGSIELLCNTVVKEVFELTGYDRVMAYKFHEDNHGEVFAEITKPG 260
Query: 258 LEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAP 317
LEPYLG HYPATDIPQA+RFL MKNKVRMICD + +KVI+D+ L +SLCGS LRA
Sbjct: 261 LEPYLGLHYPATDIPQAARFLFMKNKVRMICDVRSRSIKVIEDEALPFDISLCGSALRAA 320
Query: 318 HGCHARYMENMGSIASLVMSVTINEAE--DELDND---QEQGRK-LWGLVVCHHTSPRFV 371
H CH +YMENM SIASLVM+V +NE E DE+ ++ Q+Q +K LWGLVVCHH SPR+
Sbjct: 321 HSCHLQYMENMNSIASLVMAVVVNENEEDDEVGSEQPAQQQKKKILWGLVVCHHESPRYA 380
Query: 372 PFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD-SPVGIVTQTPN 430
PFPLRYACEFL QVF V VNKE E+ QLREK ILRTQT+L DML ++ SP+ IV+ PN
Sbjct: 381 PFPLRYACEFLAQVFAVHVNKEFEVQKQLREKSILRTQTILSDMLFKEASPLTIVSGAPN 440
Query: 431 VMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGA 490
+MDL+KCDGAAL Y K+W LG PTE QI+D+A WL E H STGLST+SL +AGYPGA
Sbjct: 441 IMDLIKCDGAALLYGDKVWRLGNAPTESQIRDLALWLSEVHMDSTGLSTESLHDAGYPGA 500
Query: 491 LALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFL 550
ALGD+VCG+A KI S D LFWFRSHTA+EI+WGGAK+D +D R+MHPR SFKAFL
Sbjct: 501 SALGDSVCGMAVAKINSSDILFWFRSHTAQEIRWGGAKNDPSDQDDSRRMHPRLSFKAFL 560
Query: 551 EVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIIT 610
EVVK +SL W D EMDAIHSLQLILRG++ V K ++ D +++ + EL+ +T
Sbjct: 561 EVVKMKSLAWTDSEMDAIHSLQLILRGTVDGVVKPTGKASLDEQIGDLKLDGLAELQAVT 620
Query: 611 NEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKN 670
+EMVRL+ETA VPILAVD +G VNGWN KAAELTGL VD AIG ++ LV SV VV+
Sbjct: 621 SEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHILTLVEESSVSVVQR 680
Query: 671 MLSSAF 676
ML A
Sbjct: 681 MLYLAL 686
>gi|388458322|gb|AFK31027.1| phytochrome b, partial [Oryza officinalis]
Length = 1171
Score = 827 bits (2135), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/674 (61%), Positives = 507/674 (75%), Gaps = 23/674 (3%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQITAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA---LTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHED HGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDGHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
GA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 SGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWED EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWEDAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAF 676
+S + V +LS A
Sbjct: 716 ESEETVNKLLSRAL 729
>gi|388458272|gb|AFK31002.1| phytochrome b, partial [Oryza sativa Indica Group]
Length = 1171
Score = 827 bits (2135), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/674 (61%), Positives = 507/674 (75%), Gaps = 23/674 (3%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA---LTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E +LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAARETSLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
GA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 SGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAF 676
+S + V +LS A
Sbjct: 716 ESEETVNKLLSRAL 729
>gi|388458354|gb|AFK31043.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 826 bits (2134), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/676 (61%), Positives = 508/676 (75%), Gaps = 27/676 (3%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSS--TVSAYLQRVQRGR 75
++ AQ ++DA+L F++S FDY+ S+ S +PSS ++AYL R+QRG
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLR----ASPIPSSEQQIAAYLSRIQRGG 114
Query: 76 LIQPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA---LTLGIDVRTLF 130
IQPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 115 HIQPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLF 174
Query: 131 TSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVT 190
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+ IDLEP +D ++
Sbjct: 175 APSSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVAIDLEPARTEDPALS 234
Query: 191 AAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVV 250
AGA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVV
Sbjct: 235 IAGAVQSQKLAVRAISRLQALPGGDVKLLCDTIVEHVRELTGYDRVMVYRFHEDEHGEVV 294
Query: 251 AECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLC 310
AE RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L
Sbjct: 295 AESRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLV 354
Query: 311 GSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHH 365
GSTLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHH
Sbjct: 355 GSTLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHH 413
Query: 366 TSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIV 425
TSPR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIV
Sbjct: 414 TSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIV 473
Query: 426 TQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEA 485
TQ+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +A
Sbjct: 474 TQSPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADA 533
Query: 486 GYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSS 545
GY GA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSS
Sbjct: 534 GYSGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSS 593
Query: 546 FKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIE 601
FKAFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + +
Sbjct: 594 FKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELR 653
Query: 602 KIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLV 660
IDEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 654 GIDELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLI 713
Query: 661 AGDSVDVVKNMLSSAF 676
+S + V +LS A
Sbjct: 714 FKESEETVNKLLSRAL 729
>gi|388458356|gb|AFK31044.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 826 bits (2134), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/674 (61%), Positives = 506/674 (75%), Gaps = 23/674 (3%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA---LTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMECSLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
GA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 SGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAF 676
+S + V +LS A
Sbjct: 716 ESEETVNKLLSRAL 729
>gi|388458348|gb|AFK31040.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 826 bits (2134), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/674 (61%), Positives = 508/674 (75%), Gaps = 23/674 (3%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA---LTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+L DMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLRDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 PGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAF 676
+S + V +LS A
Sbjct: 716 ESEETVNKLLSRAL 729
>gi|388458298|gb|AFK31015.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 826 bits (2133), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/674 (61%), Positives = 508/674 (75%), Gaps = 23/674 (3%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA---LTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG + R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGANARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
GA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 SGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAF 676
+S + V +LS A
Sbjct: 716 ESEETVNKLLSRAL 729
>gi|388458340|gb|AFK31036.1| phytochrome b, partial [Oryza rufipogon]
gi|388458342|gb|AFK31037.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 826 bits (2133), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/674 (61%), Positives = 507/674 (75%), Gaps = 23/674 (3%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA---LTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HY ATDIPQASRFL +N VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYFATDIPQASRFLFRQNHVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 PGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAF 676
+S + V +LS A
Sbjct: 716 ESEETVNKLLSRAL 729
>gi|77963962|gb|ABB13323.1| phytochrome B [Hordeum vulgare subsp. vulgare]
gi|77963964|gb|ABB13324.1| phytochrome B [Hordeum vulgare subsp. vulgare]
gi|77963966|gb|ABB13325.1| phytochrome B [Hordeum vulgare subsp. vulgare]
Length = 814
Score = 826 bits (2133), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/669 (62%), Positives = 507/669 (75%), Gaps = 21/669 (3%)
Query: 27 AQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLIQPFG 81
AQ ++DA L F++S FDYS S+ + S+ ++AYL R+QRG IQPFG
Sbjct: 3 AQYTLDAGLHAVFEQSGASGRSFDYSQSLLAPPTPSS--EQQIAAYLSRIQRGGHIQPFG 60
Query: 82 CMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA---LTLGIDVRTLFTSSGAA 136
C +AV D+ +F +L +SENA ++LDL+PH +VP+++ A ++LG D R LF+ S
Sbjct: 61 CTLAVADDSSFRLLAFSENAADLLDLSPHHSVPSLDSSAAPPPVSLGADARLLFSPSSGV 120
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ AGA++
Sbjct: 121 LLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQ 180
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVYKFH+DEHGEV+AE RR
Sbjct: 181 SQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYKFHDDEHGEVLAESRRG 240
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL +N+VRMI DC A V+VIQD + QPL L GSTLR+
Sbjct: 241 DLEPYLGLHYPATDIPQASRFLFRQNRVRMIADCHAAAVRVIQDPAMPQPLCLVGSTLRS 300
Query: 317 PHGCHARYMENMGSIASLVMSVTINEA-EDELDNDQ---EQGRKLWGLVVCHHTSPRFVP 372
PHGCHA+YM NMGSIASLVM+V I+ EDE + + KLWGLVVCHHTSPR +P
Sbjct: 301 PHGCHAQYMANMGSIASLVMAVIISSGGEDEHNMTRGVIPSAMKLWGLVVCHHTSPRCIP 360
Query: 373 FPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVM 432
FPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ+P++M
Sbjct: 361 FPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSIM 420
Query: 433 DLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALA 492
DLVKCDGAAL+Y GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGYPGA A
Sbjct: 421 DLVKCDGAALFYHGKYYPLGVTPTEAQIKDIIEWLTVCHGDSTGLSTDSLADAGYPGATA 480
Query: 493 LGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEV 552
LGDAVCG+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFKAFLEV
Sbjct: 481 LGDAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEV 540
Query: 553 VKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKIDELRI 608
VK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + IDEL
Sbjct: 541 VKSRSLPWENAEMDAIHSLQLILRDSFRDAGEGTSNSKAIVNGQVQLGELELRGIDELSS 600
Query: 609 ITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDV 667
+ EMVRLIETA VPI AVD G +NGWN+K AELTGLTV++A+G +L+ DL+ +S ++
Sbjct: 601 VAREMVRLIETATVPIFAVDTYGCINGWNAKVAELTGLTVEEAMGKSLIKDLIFKESEEI 660
Query: 668 VKNMLSSAF 676
V+ +LS A
Sbjct: 661 VEKLLSQAL 669
>gi|388458334|gb|AFK31033.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 826 bits (2133), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/674 (61%), Positives = 507/674 (75%), Gaps = 23/674 (3%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTRSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPHA-VPNIEQQDA---LTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHFVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
GA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 FGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAF 676
+S + V +LS A
Sbjct: 716 ESEETVNKLLSRAL 729
>gi|388458344|gb|AFK31038.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 826 bits (2133), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/674 (61%), Positives = 507/674 (75%), Gaps = 23/674 (3%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA---LTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HY ATDIPQASRFL +N VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYFATDIPQASRFLFRQNHVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 PGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAF 676
+S + V +LS A
Sbjct: 716 ESEETVNKLLSRAL 729
>gi|388458338|gb|AFK31035.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 826 bits (2133), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/674 (61%), Positives = 507/674 (75%), Gaps = 23/674 (3%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA---LTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HY ATDIPQASRFL +N VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYFATDIPQASRFLFRQNHVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 PGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAF 676
+S + V +LS A
Sbjct: 716 ESEETVNKLLSRAL 729
>gi|293336623|ref|NP_001168077.1| phytochromeB2 [Zea mays]
gi|37926881|gb|AAP06789.1| phytochrome B2 apoprotein [Zea mays]
gi|413955930|gb|AFW88579.1| phytochromeB2 [Zea mays]
Length = 1166
Score = 826 bits (2133), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/675 (61%), Positives = 506/675 (74%), Gaps = 27/675 (4%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDYS S+ + S+ ++AYL R+QRG I
Sbjct: 53 SKAVAQYNLDARLHAVFEQSGASGRSFDYSQSLRAPPTPSS--EQQIAAYLSRIQRGGHI 110
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQ--QDALTLGIDVRTLFTSS 133
QP GC +AV D+ +F +L +SENA ++LDL+PH +VP+++ ++LG D R F+ S
Sbjct: 111 QPLGCTLAVADDSSFRLLAFSENAADLLDLSPHHSVPSLDSVALPPVSLGADARLYFSPS 170
Query: 134 GAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAG 193
A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ AG
Sbjct: 171 SAVLLERAFAAREISLLNPLWIHSRASSKPFYAILHRIDVGVVIDLEPARTEDPALSIAG 230
Query: 194 ALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAEC 253
A++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVYKFHEDEHGEVVAE
Sbjct: 231 AVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYKFHEDEHGEVVAES 290
Query: 254 RRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGST 313
RR +LEPYLG HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L Q L L GST
Sbjct: 291 RRDNLEPYLGLHYPATDIPQASRFLFQQNRVRMIADCHAIPVRVIQDPGLSQQLCLVGST 350
Query: 314 LRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-------KLWGLVVCHHT 366
LRAPHGCHA+YM NMGSIASLVM+V I+ D D+ GR KLWGLVVCHHT
Sbjct: 351 LRAPHGCHAQYMANMGSIASLVMAVIISSGGD----DERTGRGAISSSMKLWGLVVCHHT 406
Query: 367 SPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVT 426
SPR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GI+T
Sbjct: 407 SPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPAGIIT 466
Query: 427 QTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAG 486
Q+P+VMDLVKCDGAALYYRGK + LGVTPTE QIKDI EWL H STGLSTDSL +AG
Sbjct: 467 QSPSVMDLVKCDGAALYYRGKYYPLGVTPTESQIKDIIEWLTVCHGDSTGLSTDSLADAG 526
Query: 487 YPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSF 546
Y GA+ALGDAVCG+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSF
Sbjct: 527 YLGAVALGDAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSF 586
Query: 547 KAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVNVPSVDDRIE--K 602
KAFLEVVK RSL WE+ EMDAIHSLQLILR S +D E +SK IVN +E
Sbjct: 587 KAFLEVVKSRSLSWENAEMDAIHSLQLILRDSFRDAAEGTSNSKAIVNGQRQLGELELRG 646
Query: 603 IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVA 661
I+EL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 647 INELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKIAELTGLSVEEAMGKSLVNDLIF 706
Query: 662 GDSVDVVKNMLSSAF 676
+ D+V+ +LS A
Sbjct: 707 KECDDIVEKLLSRAL 721
>gi|388458234|gb|AFK30983.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 826 bits (2133), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/674 (61%), Positives = 507/674 (75%), Gaps = 23/674 (3%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA---LTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYGFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRRIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
GA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 SGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAF 676
+S + V +LS A
Sbjct: 716 ESEETVNKLLSRAL 729
>gi|363547705|gb|AEW26895.1| phytochrome P [Encephalartos horridus]
Length = 582
Score = 826 bits (2133), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/594 (67%), Positives = 476/594 (80%), Gaps = 15/594 (2%)
Query: 84 IAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAAN 143
+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A +L+KAA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSALSLEKAAA 59
Query: 144 FGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAK 203
E++L+NPI +H K+SGKPFYAI+HRIDVG+VID E V D + AGA++S KLA +
Sbjct: 60 AREISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFESVG--DAATSVAGAVQSQKLAVR 117
Query: 204 AISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLG 263
AISRLQSLP G+I LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE RR DLEPYLG
Sbjct: 118 AISRLQSLPGGDIGLLCDTVVEGVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 264 FHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHAR 323
HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRAPHGCHA+
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHGCHAQ 237
Query: 324 YMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLI 383
YM NMGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLRYACEFL+
Sbjct: 238 YMANMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLRYACEFLM 286
Query: 384 QVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALY 443
Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALY
Sbjct: 287 QAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 346
Query: 444 YRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAV 503
Y G +W L VTP E QIKDIA+WLLE H TGLSTDSL +AGYP A +LGDAVCG+AA
Sbjct: 347 YGGMVWALEVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMAAA 406
Query: 504 KITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDV 563
+IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+
Sbjct: 407 RITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENA 466
Query: 564 EMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVP 623
EMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRLIETA P
Sbjct: 467 EMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAP 526
Query: 624 ILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
ILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 527 ILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHAL 580
>gi|388458290|gb|AFK31011.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 825 bits (2132), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/674 (61%), Positives = 508/674 (75%), Gaps = 23/674 (3%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA---LTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VI+LEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVINLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
GA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 SGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAF 676
+S + V +LS A
Sbjct: 716 ESEETVNKLLSRAL 729
>gi|406685265|gb|AFS51073.1| phytochrome P, partial [Amentotaxus poilanei]
Length = 674
Score = 825 bits (2132), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/635 (64%), Positives = 488/635 (76%), Gaps = 27/635 (4%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHA--VPNIEQQDA---- 119
AYL R+QRG IQPFGCM+AV+E +F ++ YSENA EMLD+ PH+ V N+E +
Sbjct: 1 AYLSRMQRGGSIQPFGCMLAVEETSFKIIAYSENALEMLDVMPHSHSVSNMEGRGGDSDG 60
Query: 120 -LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
LT+G D+R LFT S L++AA E++L NPI + SGKPFYAI+HRIDVG+VI
Sbjct: 61 FLTIGSDMRRLFTPSSGRNLERAAMAQEISLTNPIAME-SNSGKPFYAIVHRIDVGIVIG 119
Query: 179 LEPVNPDDVPVTAAGA-------LKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLT 231
LEPV D + A + S +LA +A SRLQS+PSG+I LLCD +V EV +LT
Sbjct: 120 LEPVRRGDAAALVSWAGGGGGGTVPSQRLAVRATSRLQSVPSGDIGLLCDTVVEEVRELT 179
Query: 232 GYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCL 291
GYDRVMVYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC
Sbjct: 180 GYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCR 239
Query: 292 APPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ 351
A PVKV Q ++L QPL L GSTLRAPHGCH++YM NMGSIASLVM+V +N + +D D
Sbjct: 240 ATPVKVKQAEELKQPLCLVGSTLRAPHGCHSQYMANMGSIASLVMAVIVNG--NGIDEDG 297
Query: 352 EQGR---------KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLRE 402
G KLWGLVVCHHTSPR VPFPLR ACEFL+Q FG+Q+N E++L+AQL E
Sbjct: 298 VSGSGSGSGRSSIKLWGLVVCHHTSPRAVPFPLRSACEFLMQTFGLQINMELQLAAQLIE 357
Query: 403 KHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKD 462
ILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G WLLGVTPTE Q+KD
Sbjct: 358 NSILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGMFWLLGVTPTEAQLKD 417
Query: 463 IAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEI 522
IA+WLLE H STGLSTDSL +AGYP A +LGDAVCG+AA +IT KDFLFWFRSHTAKE+
Sbjct: 418 IADWLLECHGDSTGLSTDSLADAGYPSAASLGDAVCGMAAARITLKDFLFWFRSHTAKEM 477
Query: 523 KWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDE 582
KWGGAKH KD GR+MHPRSSFKAFLEVVK+RS PWE+VEMDAIHSLQLILRGS QD
Sbjct: 478 KWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSFPWENVEMDAIHSLQLILRGSFQDI 537
Query: 583 VAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAE 642
D+K +V+ D +++ IDEL + +EMVRLIETA PILAVD+SG VNGWN+K E
Sbjct: 538 DDSDTKTMVHARLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSSGIVNGWNAKVGE 597
Query: 643 LTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
LTGL V +A+G +LV DLV +S++ V+ ML A
Sbjct: 598 LTGLPVGEAMGKSLVHDLVFEESIETVEKMLYHAL 632
>gi|388458320|gb|AFK31026.1| phytochrome b, partial [Oryza nivara]
Length = 1171
Score = 825 bits (2132), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/674 (61%), Positives = 508/674 (75%), Gaps = 23/674 (3%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA---LTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+P+GCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPYGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
GA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 SGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAF 676
+S + V +LS A
Sbjct: 716 ESEETVNKLLSRAL 729
>gi|388458226|gb|AFK30979.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 825 bits (2132), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/674 (61%), Positives = 507/674 (75%), Gaps = 23/674 (3%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA---LTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
GA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 SGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHS QLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSSQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAF 676
+S + V +LS A
Sbjct: 716 ESEETVNKLLSRAL 729
>gi|388458252|gb|AFK30992.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 825 bits (2131), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/674 (61%), Positives = 507/674 (75%), Gaps = 23/674 (3%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA---LTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRL +LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLHALPGGDVKLLCDTVVEYVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRNNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PH CHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHDCHAQYMANMGSIASLVMAVIISSGGDD-DHNISRGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 PGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAF 676
+S + V +LS A
Sbjct: 716 ESEETVNKLLSRAL 729
>gi|57791652|gb|AAW56594.1| phytochrome D [Arabidopsis thaliana]
gi|57791654|gb|AAW56595.1| phytochrome D [Arabidopsis thaliana]
Length = 1164
Score = 825 bits (2131), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/663 (60%), Positives = 495/663 (74%), Gaps = 14/663 (2%)
Query: 28 QTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLIQPFGC 82
Q ++DA+L F++S FDYS S + S+VP ++AYL R+QRG QPFGC
Sbjct: 62 QYTVDARLHAVFEQSGESGKSFDYSQSRKTAPYDSSVPEQQITAYLSRIQRGGYTQPFGC 121
Query: 83 MIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-QQDALTLGIDVRTLFTSSGAAALQKA 141
+IAV+E FT++GYSENA EML L +VP+IE + + LT+G D+R+LF SS L++A
Sbjct: 122 LIAVEESTFTIIGYSENAREMLGLMSQSVPSIEDKSEVLTIGTDLRSLFKSSSYLLLERA 181
Query: 142 ANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLA 201
E+ LLNPI IH +GKPFYAILHR+DVG++IDLEP +D ++ AGA++S KLA
Sbjct: 182 FVAREITLLNPIWIHSNNTGKPFYAILHRVDVGILIDLEPARTEDPALSIAGAVQSQKLA 241
Query: 202 AKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPY 261
+AIS LQSLPSG+I LLCD +V V DLTGYDRVMVYKFHEDEHGEVVAE +R DLEPY
Sbjct: 242 VRAISHLQSLPSGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRNDLEPY 301
Query: 262 LGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCH 321
+G HYPATDIPQASRFL +N+VRMI DC A PV+V+QD +L Q + L GSTLRAPHGCH
Sbjct: 302 IGLHYPATDIPQASRFLFKQNRVRMIVDCYASPVRVVQDDRLTQSICLVGSTLRAPHGCH 361
Query: 322 ARYMENMGSIASLVMSVTINEAEDELDNDQEQGR---KLWGLVVCHHTSPRFVPFPLRYA 378
A+YM NMGSIASL M+V IN E++ + GR +LWGLVVCHHTS R +PFPLRYA
Sbjct: 362 AQYMTNMGSIASLAMAVIINGNEEDGNGVNTGGRNSMRLWGLVVCHHTSARCIPFPLRYA 421
Query: 379 CEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCD 438
CEFL+Q FG+Q+N E++L+ Q+ EK +LR QT+LCDMLLRDSP GIVTQ P++MDLVKC+
Sbjct: 422 CEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLCDMLLRDSPAGIVTQRPSIMDLVKCN 481
Query: 439 GAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVC 498
GAA Y+GK + LGVTPT+ QI DI EWLL H STGLSTDSL +AGYP A ALGDAVC
Sbjct: 482 GAAFLYQGKYYSLGVTPTDSQINDIVEWLLANHSDSTGLSTDSLGDAGYPRAAALGDAVC 541
Query: 499 GIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSL 558
G+A IT +DFLFWFRSHT KEIKWGGAKH KD G++M+PRSSF+AFLEVVK R
Sbjct: 542 GMAVACITKRDFLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMNPRSSFQAFLEVVKSRCQ 601
Query: 559 PWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVN---VPSVDDRIEK-IDELRIITNEMV 614
PWE EMDAIHSLQLILR S ++ A DSK P DD +++ + E+ + EMV
Sbjct: 602 PWETAEMDAIHSLQLILRDSFKESEAMDSKAAAAGAVQPHGDDMVQQGMQEIGAVAREMV 661
Query: 615 RLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLS 673
RLIETA VPI AVD G +NGWN+K AELTGL+V+ A+G +LV +L+ + + V +LS
Sbjct: 662 RLIETATVPIFAVDIDGCINGWNAKIAELTGLSVEDAMGKSLVRELIYKEYKETVDRLLS 721
Query: 674 SAF 676
SA
Sbjct: 722 SAL 724
>gi|388458238|gb|AFK30985.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458308|gb|AFK31020.1| phytochrome b, partial [Oryza sativa Japonica Group]
gi|388458376|gb|AFK31054.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 825 bits (2131), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/674 (61%), Positives = 507/674 (75%), Gaps = 23/674 (3%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA---LTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
GA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 SGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAF 676
+S + +LS A
Sbjct: 716 ESEETENKLLSRAL 729
>gi|388458256|gb|AFK30994.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 825 bits (2131), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/674 (61%), Positives = 507/674 (75%), Gaps = 23/674 (3%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + + ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPPS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA---LTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A ++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAARGISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEYVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRNNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNISRGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 PGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAF 676
+S + V +LS A
Sbjct: 716 ESEETVNKLLSRAL 729
>gi|357117591|ref|XP_003560548.1| PREDICTED: phytochrome A type 3-like [Brachypodium distachyon]
Length = 1131
Score = 825 bits (2131), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/666 (61%), Positives = 501/666 (75%), Gaps = 12/666 (1%)
Query: 23 ARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSST---SNVPSSTVSAYLQRVQRGRLI 77
AR+ AQT++DA+L +++E+ F+YS V +T S V AYLQ +Q+G++I
Sbjct: 22 ARILAQTTLDAELNAEYEETGDSFNYSKLVEAQRNTPPEQQGRSEKVIAYLQHIQKGKMI 81
Query: 78 QPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAA 137
Q FGC++A+DE++F V+ +S+NAPEML + HAVP+++ L +G +VR+LFT GA A
Sbjct: 82 QSFGCLLALDEKSFNVIAFSQNAPEMLTMVSHAVPSVDDPPRLGIGTNVRSLFTDQGATA 141
Query: 138 LQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKS 197
L KA F +V+LLNPIL+ CKTSGKPFYAI+HR LV+D EPV P + P TAAGAL+S
Sbjct: 142 LHKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQS 201
Query: 198 YKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPD 257
YKLAAKAIS++QSLP G++ +LC+ +V EV DLTGYDRVM YKFHED+HGEV AE +P
Sbjct: 202 YKLAAKAISKIQSLPGGSMEVLCNTVVKEVFDLTGYDRVMAYKFHEDDHGEVFAEITKPG 261
Query: 258 LEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAP 317
LEPYLG HYPATDIPQA+RFL MKNKVRMICDC A +K+++D+ L +SLCGS LRAP
Sbjct: 262 LEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRARSIKIVEDESLPFDISLCGSALRAP 321
Query: 318 HGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ------GRKLWGLVVCHHTSPRFV 371
H CH +YMENM SIASLVM+V +NE E++ + + EQ +KLWGL+VCHH SPR+V
Sbjct: 322 HSCHLQYMENMNSIASLVMAVVVNENEEDDEVEAEQPAQQQKKKKLWGLLVCHHESPRYV 381
Query: 372 PFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD-SPVGIVTQTPN 430
PFPLRYACEFL QVF V VNKE EL QLREK ILR QT+L DML R+ SP+ I++ TPN
Sbjct: 382 PFPLRYACEFLAQVFAVHVNKEFELENQLREKSILRMQTILSDMLFREASPLTIISGTPN 441
Query: 431 VMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGA 490
VMDLVKCDGAAL + K+W L PTE QI+DIA WL E HR STGLST+SL +AGYPGA
Sbjct: 442 VMDLVKCDGAALLHGDKVWRLRDAPTESQIRDIASWLSEVHRDSTGLSTESLHDAGYPGA 501
Query: 491 LALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFL 550
ALGD +CG+A KI S+D LFWFRSHTA EIKWGGAKHD D GR+MHPR SFKAFL
Sbjct: 502 SALGDMICGMAVAKINSRDILFWFRSHTAAEIKWGGAKHDPSDMDDGRRMHPRLSFKAFL 561
Query: 551 EVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIIT 610
EVVK +SL W D EMDAIHSLQLILRG+L D + ++ D +++ + EL+ +T
Sbjct: 562 EVVKMKSLSWSDYEMDAIHSLQLILRGALNDGIKATKGASLDNQIGDLKLDGLAELQAVT 621
Query: 611 NEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKN 670
+EMVRL+ETA VPILAVD +G +NGWN KAAELTGL VD AIG ++ LV SV VV+
Sbjct: 622 SEMVRLMETATVPILAVDGNGLINGWNQKAAELTGLRVDDAIGRHILTLVEESSVPVVQR 681
Query: 671 MLSSAF 676
ML A
Sbjct: 682 MLYLAL 687
>gi|388458224|gb|AFK30978.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 825 bits (2130), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/674 (61%), Positives = 507/674 (75%), Gaps = 23/674 (3%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA---LTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+V DLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVNDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSLKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
GA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 SGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAF 676
+S + V +LS A
Sbjct: 716 ESEETVNKLLSRAL 729
>gi|388458302|gb|AFK31017.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 825 bits (2130), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/674 (61%), Positives = 507/674 (75%), Gaps = 23/674 (3%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA---LTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
GA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 SGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAF 676
+S + +LS A
Sbjct: 716 ESEETENKLLSRAL 729
>gi|388458228|gb|AFK30980.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 825 bits (2130), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/674 (61%), Positives = 507/674 (75%), Gaps = 23/674 (3%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA---LTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRF +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFPFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
GA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 SGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAF 676
+S + V +LS A
Sbjct: 716 ESEETVNKLLSRAL 729
>gi|363547719|gb|AEW26902.1| phytochrome P [Encephalartos laurentianus]
Length = 582
Score = 824 bits (2129), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/594 (67%), Positives = 476/594 (80%), Gaps = 15/594 (2%)
Query: 84 IAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAAN 143
+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A +L+KAA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSALSLEKAAA 59
Query: 144 FGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAK 203
E++L NPI +H K+SGKPFYAI+H IDVG+VID EPV D + AGA++S KLA +
Sbjct: 60 AQEISLTNPIWMHSKSSGKPFYAIVHGIDVGMVIDFEPVG--DAATSVAGAVQSQKLAVR 117
Query: 204 AISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLG 263
AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR DLEPYLG
Sbjct: 118 AISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 264 FHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHAR 323
HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRAPHGCHA+
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHGCHAQ 237
Query: 324 YMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLI 383
YM +MGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLRYACEFL+
Sbjct: 238 YMASMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLRYACEFLM 286
Query: 384 QVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALY 443
Q FG+Q+N EV+L+AQL EK IL+ QT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALY
Sbjct: 287 QAFGLQLNMEVQLAAQLTEKRILKIQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 346
Query: 444 YRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAV 503
Y G +W LGVTP E QIKDIA WLLE H TGLSTDSL +AGYP A +LGDAVCG+AA
Sbjct: 347 YGGMVWALGVTPAEAQIKDIAGWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMAAA 406
Query: 504 KITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDV 563
+IT+KDFLFWFRSHTAKEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+V
Sbjct: 407 RITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENV 466
Query: 564 EMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVP 623
EMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRLIETA P
Sbjct: 467 EMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAP 526
Query: 624 ILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
ILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 527 ILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHAL 580
>gi|388458352|gb|AFK31042.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 824 bits (2129), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/674 (61%), Positives = 507/674 (75%), Gaps = 23/674 (3%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA---LTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLL DSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLWDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
GA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 SGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAF 676
+S + V +LS A
Sbjct: 716 ESEETVNKLLSRAL 729
>gi|57791668|gb|AAW56602.1| phytochrome D [Arabidopsis thaliana]
Length = 1164
Score = 824 bits (2128), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/663 (60%), Positives = 496/663 (74%), Gaps = 14/663 (2%)
Query: 28 QTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLIQPFGC 82
Q ++DA+L F++S FDYS S+ + S+VP ++AYL R+QRG QPFGC
Sbjct: 62 QYTVDARLHAVFEQSGESGKSFDYSQSLKTAPYDSSVPEQQITAYLSRIQRGGYTQPFGC 121
Query: 83 MIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-QQDALTLGIDVRTLFTSSGAAALQKA 141
+IAV+E FT++GYSENA EML L +VP+IE + + LT+G D+R+LF SS L++A
Sbjct: 122 LIAVEESTFTIIGYSENAREMLGLMSQSVPSIEDKSEVLTIGTDLRSLFKSSSYLLLERA 181
Query: 142 ANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLA 201
E+ LLNPI IH +GKPFYAILHR+DVG++IDLEP +D ++ AGA++S KLA
Sbjct: 182 FVAREITLLNPIWIHSNNTGKPFYAILHRVDVGILIDLEPARTEDPALSIAGAVQSQKLA 241
Query: 202 AKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPY 261
+AIS LQSLPSG+I LLCD +V V DLTGYDRVMVYKFHEDEHGEVVAE +R DLEPY
Sbjct: 242 VRAISHLQSLPSGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRNDLEPY 301
Query: 262 LGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCH 321
+G HYPATDIPQASRFL +N+VRMI DC A PV+V+QD +L Q + L GSTLRAPHGCH
Sbjct: 302 IGLHYPATDIPQASRFLFKQNRVRMIVDCYASPVRVVQDDRLTQSICLVGSTLRAPHGCH 361
Query: 322 ARYMENMGSIASLVMSVTINEAEDELDNDQEQGR---KLWGLVVCHHTSPRFVPFPLRYA 378
A+YM NMGSIASL M+V IN E++ + GR +LWGLVVCHHTS R +PFPLRYA
Sbjct: 362 AQYMTNMGSIASLAMAVIINGNEEDGNGVNTGGRNSMRLWGLVVCHHTSARCIPFPLRYA 421
Query: 379 CEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCD 438
CEFL+Q FG+Q+N E++L+ Q+ EK +LR QT+LCDMLLRDSP GIVTQ P++MDLVKC+
Sbjct: 422 CEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLCDMLLRDSPAGIVTQRPSIMDLVKCN 481
Query: 439 GAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVC 498
GAA Y+GK + LGVTPT+ QI DI EWLL H STGLSTDSL +AGYP A ALGDAVC
Sbjct: 482 GAAFLYQGKYYSLGVTPTDSQINDIVEWLLANHSDSTGLSTDSLGDAGYPRAAALGDAVC 541
Query: 499 GIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSL 558
G+A IT +DFLFWFRSHT KEIKWGGAKH KD G++M+PRSSF+AFLEVVK R
Sbjct: 542 GMAVACITKRDFLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMNPRSSFQAFLEVVKSRCQ 601
Query: 559 PWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVN---VPSVDDRIEK-IDELRIITNEMV 614
PWE EMDAIHSLQLILR S ++ A DSK P DD +++ + E+ + EMV
Sbjct: 602 PWETAEMDAIHSLQLILRDSFKESEAMDSKAAAAGAVQPHGDDMVQQGMQEIGAVAREMV 661
Query: 615 RLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLS 673
RLI+TA VPI AVD G +NGWN+K AELTGL+V+ A+G +LV +L+ + + V +LS
Sbjct: 662 RLIKTATVPIFAVDIDGCINGWNAKIAELTGLSVEDAMGKSLVRELIYKEYKETVDRLLS 721
Query: 674 SAF 676
SA
Sbjct: 722 SAL 724
>gi|406685267|gb|AFS51074.1| phytochrome P, partial [Amentotaxus yunnanensis]
Length = 674
Score = 824 bits (2128), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/635 (64%), Positives = 488/635 (76%), Gaps = 27/635 (4%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHA--VPNIEQQDA---- 119
AYL R+QRG IQPFGCM+AV+E +F ++ YSENA EMLD+ PH+ V N+E +
Sbjct: 1 AYLSRMQRGGSIQPFGCMLAVEETSFKIIAYSENALEMLDVMPHSHSVSNMEGRGGDSDG 60
Query: 120 -LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
LT+G D+R LFT S L++AA E++L NPI + SGKPFYAI+HRIDVG+VID
Sbjct: 61 FLTIGSDMRRLFTPSSGRNLERAAMAQEISLTNPIAME-SNSGKPFYAIVHRIDVGIVID 119
Query: 179 LEPVNPDDVPVTAAGA-------LKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLT 231
LEPV D + A + S +LA +A SRLQS+PSG+I LLCD +V EV +LT
Sbjct: 120 LEPVRRGDAAALVSWAGGGGGGTVPSQRLAVRATSRLQSVPSGDIGLLCDTVVEEVRELT 179
Query: 232 GYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCL 291
GYDRVMVYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC
Sbjct: 180 GYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCR 239
Query: 292 APPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ 351
A PVKV Q ++L QPL L GSTLRAPHGCH++YM NMGSIASLVM+V +N + +D D
Sbjct: 240 ATPVKVKQAEELKQPLCLVGSTLRAPHGCHSQYMANMGSIASLVMAVIVNG--NGIDEDG 297
Query: 352 EQGR---------KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLRE 402
G KLWGLVVCHHTSPR VPFPLR ACEFL+Q FG+Q+N E++L+AQL E
Sbjct: 298 VSGSGSGSGRSSIKLWGLVVCHHTSPRAVPFPLRSACEFLMQTFGLQINMELQLAAQLIE 357
Query: 403 KHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKD 462
ILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALY G WLLGVTPTE Q+KD
Sbjct: 358 NSILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYCGGMFWLLGVTPTEAQLKD 417
Query: 463 IAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEI 522
IA+WLLE H STGLSTDSL +AGYP A +LGDAVCG+AA +IT KDFLFWFRSHTAKE+
Sbjct: 418 IADWLLECHGDSTGLSTDSLADAGYPSAASLGDAVCGMAAARITLKDFLFWFRSHTAKEM 477
Query: 523 KWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDE 582
KWGGAKH KD GR+MHPRSSFKAFLEVVK+RS PWE+VEMDAIHSLQLILRGS QD
Sbjct: 478 KWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSFPWENVEMDAIHSLQLILRGSFQDI 537
Query: 583 VAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAE 642
D+K +V+ D +++ IDEL + +EMVRLIETA PILAVD+SG VNGWN+K E
Sbjct: 538 DDSDTKTMVHARLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSSGIVNGWNAKVGE 597
Query: 643 LTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
LTGL V +A+G +LV DLV +S++ V+ ML A
Sbjct: 598 LTGLPVGEAMGKSLVHDLVFEESIETVEKMLYHAL 632
>gi|363547742|gb|AEW26913.1| phytochrome P [Encephalartos paucidentatus]
Length = 582
Score = 824 bits (2128), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/594 (67%), Positives = 477/594 (80%), Gaps = 15/594 (2%)
Query: 84 IAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAAN 143
+ V+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A +L+KAA
Sbjct: 1 LGVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSAVSLEKAAA 59
Query: 144 FGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAK 203
E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D + AGA++S KLA +
Sbjct: 60 AQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAATSVAGAVQSQKLAVR 117
Query: 204 AISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLG 263
AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR DLEPYLG
Sbjct: 118 AISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 264 FHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHAR 323
HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRAPHGCHA+
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELGQPLCLVGSTLRAPHGCHAQ 237
Query: 324 YMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLI 383
YM +MGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLRYACEFL+
Sbjct: 238 YMASMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLRYACEFLM 286
Query: 384 QVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALY 443
Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALY
Sbjct: 287 QAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 346
Query: 444 YRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAV 503
Y G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYP A +LGDAVCG+AA
Sbjct: 347 YGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMAAA 406
Query: 504 KITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDV 563
+IT+KDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+RSLP E+
Sbjct: 407 RITAKDFLFWFRSHTAKEMKWGGAKHRPDDKDDGRRMHPRSSFKAFLEVVKRRSLPRENA 466
Query: 564 EMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVP 623
EMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRLIETA P
Sbjct: 467 EMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAP 526
Query: 624 ILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
ILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 527 ILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHAL 580
>gi|156752995|gb|ABU94243.1| phytochrome P [Pinus sylvestris]
Length = 736
Score = 824 bits (2128), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/569 (69%), Positives = 469/569 (82%), Gaps = 3/569 (0%)
Query: 111 VPNIE--QQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAIL 168
VP++E QQD LT+G DVRTLFT++ A +L+KAA E++L+NPI +HCK S KPFYAI+
Sbjct: 1 VPSMEKPQQDVLTIGTDVRTLFTAASAHSLEKAAVAQEISLMNPIWVHCKNSRKPFYAIV 60
Query: 169 HRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVS 228
HRIDVG+VIDLEP+ D ++AAGA++S KLA +AISRLQSLP G++ LLCD +V V
Sbjct: 61 HRIDVGMVIDLEPLRTGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDVGLLCDTVVENVR 120
Query: 229 DLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMIC 288
+LTGYDRVMVYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMIC
Sbjct: 121 ELTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMIC 180
Query: 289 DCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD 348
DC+A PVKVIQ ++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN +DE
Sbjct: 181 DCMATPVKVIQSEELMQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIINGNDDEGG 240
Query: 349 NDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRT 408
KLWGLVVCHHTSPR VPFPLRYACEFL+Q G+Q+N E++L+AQL EKHILRT
Sbjct: 241 GSGRNSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQALGLQLNMELQLAAQLTEKHILRT 300
Query: 409 QTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLL 468
QT+LCDMLLRD+P+GIVTQ+P++ DLVKCDGAALYY G W+LGVTPTE QIKDIA+WLL
Sbjct: 301 QTLLCDMLLRDAPMGIVTQSPSIKDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLL 360
Query: 469 EYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAK 528
E+H STGLSTDSL +AGYPGA +LGDAVCG+A+ +ITSKDFLFWFRSHTAKE+KWGGAK
Sbjct: 361 EHHGDSTGLSTDSLADAGYPGAASLGDAVCGMASARITSKDFLFWFRSHTAKEMKWGGAK 420
Query: 529 HDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSK 588
H KD R+MHPRSSFKAFLEVVK+RSLPW++VE+DAIHSLQLILRGS +D +K
Sbjct: 421 HHPDDKDDARRMHPRSSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFRDIDDSGTK 480
Query: 589 MIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTV 648
+V+ D R++ IDEL + +EMVRLIETA PILAVD +G VNGWN+K AELTGL V
Sbjct: 481 TMVHSRLNDLRLQGIDELSSVASEMVRLIETATAPILAVDYNGLVNGWNAKVAELTGLPV 540
Query: 649 DQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
+A+G +LV DLV SV+ V+ ML +A
Sbjct: 541 AEAMGMSLVQDLVFEQSVERVEKMLHNAL 569
>gi|156752953|gb|ABU94222.1| phytochrome P [Pinus sylvestris]
gi|156752955|gb|ABU94223.1| phytochrome P [Pinus sylvestris]
gi|156752957|gb|ABU94224.1| phytochrome P [Pinus sylvestris]
gi|156752959|gb|ABU94225.1| phytochrome P [Pinus sylvestris]
gi|156752961|gb|ABU94226.1| phytochrome P [Pinus sylvestris]
gi|156752963|gb|ABU94227.1| phytochrome P [Pinus sylvestris]
gi|156752965|gb|ABU94228.1| phytochrome P [Pinus sylvestris]
gi|156752967|gb|ABU94229.1| phytochrome P [Pinus sylvestris]
gi|156752969|gb|ABU94230.1| phytochrome P [Pinus sylvestris]
gi|156752971|gb|ABU94231.1| phytochrome P [Pinus sylvestris]
gi|156752973|gb|ABU94232.1| phytochrome P [Pinus sylvestris]
gi|156752975|gb|ABU94233.1| phytochrome P [Pinus sylvestris]
gi|156752977|gb|ABU94234.1| phytochrome P [Pinus sylvestris]
gi|156752979|gb|ABU94235.1| phytochrome P [Pinus sylvestris]
gi|156752981|gb|ABU94236.1| phytochrome P [Pinus sylvestris]
gi|156752983|gb|ABU94237.1| phytochrome P [Pinus sylvestris]
gi|156752985|gb|ABU94238.1| phytochrome P [Pinus sylvestris]
gi|156752987|gb|ABU94239.1| phytochrome P [Pinus sylvestris]
gi|156752989|gb|ABU94240.1| phytochrome P [Pinus sylvestris]
gi|156752991|gb|ABU94241.1| phytochrome P [Pinus sylvestris]
gi|156752993|gb|ABU94242.1| phytochrome P [Pinus sylvestris]
gi|156752997|gb|ABU94244.1| phytochrome P [Pinus sylvestris]
gi|156752999|gb|ABU94245.1| phytochrome P [Pinus sylvestris]
gi|156753001|gb|ABU94246.1| phytochrome P [Pinus sylvestris]
gi|156753003|gb|ABU94247.1| phytochrome P [Pinus sylvestris]
gi|156753005|gb|ABU94248.1| phytochrome P [Pinus sylvestris]
gi|156753007|gb|ABU94249.1| phytochrome P [Pinus sylvestris]
gi|156753009|gb|ABU94250.1| phytochrome P [Pinus sylvestris]
gi|156753011|gb|ABU94251.1| phytochrome P [Pinus sylvestris]
gi|156753013|gb|ABU94252.1| phytochrome P [Pinus sylvestris]
gi|156753015|gb|ABU94253.1| phytochrome P [Pinus sylvestris]
gi|156753017|gb|ABU94254.1| phytochrome P [Pinus sylvestris]
gi|156753019|gb|ABU94255.1| phytochrome P [Pinus sylvestris]
gi|156753021|gb|ABU94256.1| phytochrome P [Pinus sylvestris]
gi|156753025|gb|ABU94258.1| phytochrome P [Pinus sylvestris]
gi|156753031|gb|ABU94261.1| phytochrome P [Pinus sylvestris]
Length = 736
Score = 824 bits (2128), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/569 (69%), Positives = 469/569 (82%), Gaps = 3/569 (0%)
Query: 111 VPNIE--QQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAIL 168
VP++E QQD LT+G DVRTLFT++ A +L+KAA E++L+NPI +HCK S KPFYAI+
Sbjct: 1 VPSMEKPQQDVLTIGTDVRTLFTAASAHSLEKAAVAQEISLMNPIWVHCKNSRKPFYAIV 60
Query: 169 HRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVS 228
HRIDVG+VIDLEP+ D ++AAGA++S KLA +AISRLQSLP G++ LLCD +V V
Sbjct: 61 HRIDVGMVIDLEPLRTGDAFMSAAGAVQSQKLAVRAISRLQSLPCGDVGLLCDTVVENVR 120
Query: 229 DLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMIC 288
+LTGYDRVMVYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMIC
Sbjct: 121 ELTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMIC 180
Query: 289 DCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD 348
DC+A PVKVIQ ++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN +DE
Sbjct: 181 DCMATPVKVIQSEELMQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIINGNDDEGG 240
Query: 349 NDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRT 408
KLWGLVVCHHTSPR VPFPLRYACEFL+Q G+Q+N E++L+AQL EKHILRT
Sbjct: 241 GSGRNSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQALGLQLNMELQLAAQLTEKHILRT 300
Query: 409 QTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLL 468
QT+LCDMLLRD+P+GIVTQ+P++ DLVKCDGAALYY G W+LGVTPTE QIKDIA+WLL
Sbjct: 301 QTLLCDMLLRDAPMGIVTQSPSIKDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWLL 360
Query: 469 EYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAK 528
E+H STGLSTDSL +AGYPGA +LGDAVCG+A+ +ITSKDFLFWFRSHTAKE+KWGGAK
Sbjct: 361 EHHGDSTGLSTDSLADAGYPGAASLGDAVCGMASARITSKDFLFWFRSHTAKEMKWGGAK 420
Query: 529 HDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSK 588
H KD R+MHPRSSFKAFLEVVK+RSLPW++VE+DAIHSLQLILRGS +D +K
Sbjct: 421 HHPDDKDDARRMHPRSSFKAFLEVVKRRSLPWDNVEIDAIHSLQLILRGSFRDIDDSGTK 480
Query: 589 MIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTV 648
+V+ D R++ IDEL + +EMVRLIETA PILAVD +G VNGWN+K AELTGL V
Sbjct: 481 TMVHSRLNDLRLQGIDELSSVASEMVRLIETATAPILAVDYNGLVNGWNAKVAELTGLPV 540
Query: 649 DQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
+A+G +LV DLV SV+ V+ ML +A
Sbjct: 541 GEAMGMSLVQDLVFEQSVERVEKMLHNAL 569
>gi|388458274|gb|AFK31003.1| phytochrome b, partial [Oryza sativa Indica Group]
Length = 1171
Score = 823 bits (2127), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/674 (61%), Positives = 507/674 (75%), Gaps = 23/674 (3%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA---LTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEF +Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRD+P GIVTQ
Sbjct: 416 PRCIPFPLRYACEFFMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDTPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIK+I EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKNIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
GA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 SGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAF 676
+S + V +LS A
Sbjct: 716 ESEETVNKLLSRAL 729
>gi|388458360|gb|AFK31046.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 823 bits (2127), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/674 (61%), Positives = 507/674 (75%), Gaps = 23/674 (3%)
Query: 23 ARVAAQTSIDAKLAEDFDESD-----FDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++SD FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSDASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA---LTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
GA ALGDAV G+A IT D+L WFRSHTAKEIKWGGAKH KD G++M PRSSFK
Sbjct: 536 SGAAALGDAVSGMAVAYITPSDYLSWFRSHTAKEIKWGGAKHHPEDKDDGQRMRPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAF 676
+S + V +LS A
Sbjct: 716 ESEETVNKLLSRAL 729
>gi|388458266|gb|AFK30999.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 823 bits (2126), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/674 (61%), Positives = 507/674 (75%), Gaps = 23/674 (3%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S F Y+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFYYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA---LTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG + R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGANARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRNNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNISRGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 PGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAF 676
+S + +LS A
Sbjct: 716 ESEETENRLLSRAL 729
>gi|57791664|gb|AAW56600.1| phytochrome D [Arabidopsis thaliana]
Length = 1164
Score = 823 bits (2125), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/663 (60%), Positives = 495/663 (74%), Gaps = 14/663 (2%)
Query: 28 QTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLIQPFGC 82
Q ++DA+L F++S FDYS S+ + S+VP ++AYL R+QRG QPFGC
Sbjct: 62 QYTVDARLHAVFEQSGESGKSFDYSQSLKTAPYDSSVPEQQITAYLSRIQRGGYTQPFGC 121
Query: 83 MIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-QQDALTLGIDVRTLFTSSGAAALQKA 141
+IAV+E FT++GYSENA EML L +VP+IE + + LT+G D+R+LF SS L++A
Sbjct: 122 LIAVEESTFTIIGYSENAREMLGLMSQSVPSIEDKSEVLTIGTDLRSLFKSSSYLLLERA 181
Query: 142 ANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLA 201
E+ LLNPI IH +GKPFYAILHR+DVG++IDLEP +D ++ AGA++S KLA
Sbjct: 182 FVAREITLLNPIWIHSNNTGKPFYAILHRVDVGILIDLEPARTEDPALSIAGAVQSQKLA 241
Query: 202 AKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPY 261
+AIS LQSLPSG+I LLCD +V V DLTGYDRVMVYKFHEDEHGEVVAE +R DLEPY
Sbjct: 242 VRAISHLQSLPSGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRNDLEPY 301
Query: 262 LGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCH 321
+G HYPATDIPQASRFL +N+VRMI DC A PV+V+QD +L Q + L GSTLRAPHGCH
Sbjct: 302 IGLHYPATDIPQASRFLFKQNRVRMIVDCYASPVRVVQDDRLTQSICLVGSTLRAPHGCH 361
Query: 322 ARYMENMGSIASLVMSVTINEAEDELDNDQEQGR---KLWGLVVCHHTSPRFVPFPLRYA 378
A+YM NMGSIASL M+V IN E++ + GR +LWGLVVCHHTS R +PFPLRYA
Sbjct: 362 AQYMTNMGSIASLAMAVIINGNEEDGNGVNTGGRNSMRLWGLVVCHHTSARCIPFPLRYA 421
Query: 379 CEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCD 438
CEFL+Q FG+Q+N E++L+ Q+ EK +LR QT+LCDMLLRDSP GIVTQ P++MDLVKC+
Sbjct: 422 CEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLCDMLLRDSPAGIVTQRPSIMDLVKCN 481
Query: 439 GAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVC 498
GAA Y+GK + LGVTPT+ QI DI EWLL H STGLSTDSL +AGYP A ALGDAVC
Sbjct: 482 GAAFLYQGKYYSLGVTPTDSQINDIVEWLLANHSDSTGLSTDSLGDAGYPRAAALGDAVC 541
Query: 499 GIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSL 558
G+A IT +DFLFWFRSHT KEIKWGGAKH KD G++M+PRSSF+AFLEVVK R
Sbjct: 542 GMAVACITKRDFLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMNPRSSFQAFLEVVKSRCQ 601
Query: 559 PWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVN---VPSVDDRIEK-IDELRIITNEMV 614
PWE EMDAIHSLQLILR S ++ A DSK P DD +++ + E+ + EMV
Sbjct: 602 PWETAEMDAIHSLQLILRDSFKESEAMDSKAAAAGAVQPHGDDMVQQGMQEIGAVAREMV 661
Query: 615 RLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLS 673
RLI TA VPI AVD G +NGWN+K AELTGL+V+ A G +LV +L++ + + V +LS
Sbjct: 662 RLIXTATVPIFAVDIDGCINGWNAKIAELTGLSVEDAXGKSLVRELISKEYKETVDRLLS 721
Query: 674 SAF 676
SA
Sbjct: 722 SAL 724
>gi|166563|gb|AAA76820.1| phytochrome [Avena sativa]
Length = 1129
Score = 823 bits (2125), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/667 (61%), Positives = 499/667 (74%), Gaps = 12/667 (1%)
Query: 22 NARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSNVP---SSTVSAYLQRVQRGRL 76
ARV AQT++DA+L +++ES FDYS V V S V AYLQ +Q+G+L
Sbjct: 19 QARVLAQTTLDAELNAEYEESGDSFDYSKLVEAQRDGPPVQQGRSEKVIAYLQHIQKGKL 78
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQ FGC++A+DE++F V+ +SENAPEML HAVP+++ L +G +VR+LF+ GA
Sbjct: 79 IQTFGCLLALDEKSFNVIAFSENAPEMLTTVSHAVPSVDDPPRLGIGTNVRSLFSDQGAT 138
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
AL KA F +V+LLNPIL+ CKTSGKPFYAI+HR LV+D EPV P + P TAAGAL+
Sbjct: 139 ALHKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQ 198
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
SYKLAAKAIS++QSLP G++ +LC+ +V EV DLTGYDRVM YKFHED+HGEV +E +P
Sbjct: 199 SYKLAAKAISKIQSLPGGSMEVLCNTVVKEVFDLTGYDRVMAYKFHEDDHGEVFSEITKP 258
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
LEPYLG HYPATDIPQA+RFL MKNKVRMICDC A +KVI+ + L +SLCGS LRA
Sbjct: 259 GLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRARSIKVIEAEALPFDISLCGSALRA 318
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ------GRKLWGLVVCHHTSPRF 370
PH CH +YMENM SIASLVM+V +NE E++ + + EQ +KLWGL+VCHH SPR+
Sbjct: 319 PHSCHLQYMENMNSIASLVMAVVVNENEEDDEAESEQPAQQQKKKKLWGLLVCHHESPRY 378
Query: 371 VPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD-SPVGIVTQTP 429
VPFPLRYACEFL QVF V VN+E EL QLREK+IL+ QT+L DML R+ SP+ IV+ TP
Sbjct: 379 VPFPLRYACEFLAQVFAVHVNREFELEKQLREKNILKMQTMLSDMLFREASPLTIVSGTP 438
Query: 430 NVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPG 489
N+MDLVKCDGAAL Y GK+W L PTE QI DIA WL + HR STGLSTDSL +AGYPG
Sbjct: 439 NIMDLVKCDGAALLYGGKVWRLRNAPTESQIHDIAFWLSDVHRDSTGLSTDSLHDAGYPG 498
Query: 490 ALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAF 549
A ALGD +CG+A KI SKD LFWFRSHTA EI+WGGAK+D D R+MHPR SFKAF
Sbjct: 499 AAALGDMICGMAVAKINSKDILFWFRSHTAAEIRWGGAKNDPSDMDDSRRMHPRLSFKAF 558
Query: 550 LEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRII 609
LEVVK +SLPW D EMDAIHSLQLILRG+L D + ++ D +++ + EL+ +
Sbjct: 559 LEVVKMKSLPWSDYEMDAIHSLQLILRGTLNDASKPKREASLDNQIGDLKLDGLAELQAV 618
Query: 610 TNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVK 669
T+EMVRL+ETA VPILAVD +G VNGWN KAAELTGL VD AIG ++ LV SV VV+
Sbjct: 619 TSEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHILTLVEDSSVPVVQ 678
Query: 670 NMLSSAF 676
ML A
Sbjct: 679 RMLYLAL 685
>gi|57791650|gb|AAW56593.1| phytochrome D [Arabidopsis thaliana]
Length = 1164
Score = 823 bits (2125), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/663 (60%), Positives = 494/663 (74%), Gaps = 14/663 (2%)
Query: 28 QTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLIQPFGC 82
Q ++DA+L F++S FDYS S+ + S+VP ++AYL R+QRG QPFGC
Sbjct: 62 QYTVDARLHAVFEQSGESGKSFDYSQSLKTAPYDSSVPEQQITAYLSRIQRGGYTQPFGC 121
Query: 83 MIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-QQDALTLGIDVRTLFTSSGAAALQKA 141
+IAV+E FT++GYSENA EML L +VP+IE + + LT+G D+R+LF SS L++A
Sbjct: 122 LIAVEESTFTIIGYSENAREMLGLMSQSVPSIEDKSEVLTIGTDLRSLFKSSSYLLLERA 181
Query: 142 ANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLA 201
E+ LLNPI IH +GKPFYAILHR+DVG++IDLEP +D ++ AGA++S KLA
Sbjct: 182 FVAREITLLNPIWIHSNNTGKPFYAILHRVDVGILIDLEPARTEDPALSIAGAVQSQKLA 241
Query: 202 AKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPY 261
+AIS LQSLPSG+I LLCD +V V DLTGYDRVMVYKFHEDEHGEVVAE +R DLEPY
Sbjct: 242 VRAISHLQSLPSGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRNDLEPY 301
Query: 262 LGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCH 321
+G HYPATDIPQASRFL +N+VRMI DC A PV+V+QD +L Q + L GSTLRAPHGCH
Sbjct: 302 IGLHYPATDIPQASRFLFKQNRVRMIVDCYASPVRVVQDDRLTQSICLVGSTLRAPHGCH 361
Query: 322 ARYMENMGSIASLVMSVTINEAEDELDNDQEQGR---KLWGLVVCHHTSPRFVPFPLRYA 378
A+YM NMGSIASL M+V IN E++ + GR +LWGLVVCHHTS R +PFPLRYA
Sbjct: 362 AQYMTNMGSIASLAMAVIINGNEEDGNGVNTGGRNSMRLWGLVVCHHTSARCIPFPLRYA 421
Query: 379 CEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCD 438
CEFL+Q FG+Q+N E++L+ Q+ EK +LR QT+LCDMLLRDSP GIVTQ P++MDLVKC+
Sbjct: 422 CEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLCDMLLRDSPAGIVTQRPSIMDLVKCN 481
Query: 439 GAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVC 498
GAA Y+GK + LGVTPT+ QI DI EWLL H STGLSTDSL + GYP A ALGDAVC
Sbjct: 482 GAAFLYQGKYYSLGVTPTDSQINDIVEWLLANHSDSTGLSTDSLGDGGYPRAAALGDAVC 541
Query: 499 GIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSL 558
G+A IT +DFLFWFRSHT KEIKWGGAKH KD G++M+PRSSF+ FLEVVK R
Sbjct: 542 GMAVACITKRDFLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMNPRSSFQTFLEVVKSRCQ 601
Query: 559 PWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVN---VPSVDDRIEK-IDELRIITNEMV 614
PWE EMDAIHSLQLILR S ++ A DSK P DD +++ + E+ + EMV
Sbjct: 602 PWETAEMDAIHSLQLILRDSFKESEAMDSKAAAAGAVQPHGDDMVQQGMQEIGAVAREMV 661
Query: 615 RLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLS 673
RLIETA VPI AVD G +NGWN+K AELTGL+V+ A+G +LV +L+ + + V +LS
Sbjct: 662 RLIETATVPIFAVDIDGCINGWNAKIAELTGLSVEDAMGKSLVRELIYKEYKETVDRLLS 721
Query: 674 SAF 676
SA
Sbjct: 722 SAL 724
>gi|130182|sp|P06594.3|PHYA4_AVESA RecName: Full=Phytochrome A type 4; Short=AP4
gi|16113|emb|CAA27000.1| unnamed protein product [Avena sativa]
Length = 1129
Score = 823 bits (2125), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/664 (61%), Positives = 496/664 (74%), Gaps = 12/664 (1%)
Query: 25 VAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSNVP---SSTVSAYLQRVQRGRLIQP 79
V AQT++DA+L +++ES FDYS V V S V AYLQ +Q+G+LIQ
Sbjct: 22 VLAQTTLDAELNAEYEESGDSFDYSKLVEAQRDGPPVQQGRSEKVIAYLQHIQKGKLIQT 81
Query: 80 FGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQ 139
FGCM+A+DE++F V+ +SENAPEML HAVP+++ L +G +VR+LF+ GA AL
Sbjct: 82 FGCMLALDEKSFNVIAFSENAPEMLTTVSHAVPSVDDPPRLGIGTNVRSLFSDQGATALH 141
Query: 140 KAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYK 199
KA F +V+LLNPIL+ CKTSGKPFYAI+HR LV+D EPV P + P TAAGAL+SYK
Sbjct: 142 KALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQSYK 201
Query: 200 LAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLE 259
LAAKAIS++QSLP G++ +LC+ +V EV DLTGYDRVM YKFHED+HGEV AE +P LE
Sbjct: 202 LAAKAISKIQSLPGGSMEVLCNTVVKEVFDLTGYDRVMAYKFHEDDHGEVFAEITKPGLE 261
Query: 260 PYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHG 319
PYLG HYPATDIPQA+RFL MKNKVRMICDC A +KVI+ + L +SLCGS LRAPH
Sbjct: 262 PYLGLHYPATDIPQAARFLFMKNKVRMICDCRARSIKVIEAEALPFDISLCGSALRAPHS 321
Query: 320 CHARYMENMGSIASLVMSVTINEAEDELDNDQEQ------GRKLWGLVVCHHTSPRFVPF 373
CH +YMENM SIASLVM+V +NE E++ + + EQ +KLWGL+VCHH SPR+VPF
Sbjct: 322 CHLQYMENMNSIASLVMAVVVNENEEDDEAESEQPAQQQQKKKLWGLLVCHHESPRYVPF 381
Query: 374 PLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD-SPVGIVTQTPNVM 432
PLRYACEFL QVF V VN+E EL QLREK IL+ QT+L DML R+ SP+ IV+ PN+M
Sbjct: 382 PLRYACEFLAQVFAVHVNREFELEKQLREKSILKMQTMLSDMLFREASPLTIVSGAPNIM 441
Query: 433 DLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALA 492
DLVKCDGAAL Y GK+W L PTE QI DIA WL + HR STGLSTDSL +AGYPGA A
Sbjct: 442 DLVKCDGAALLYGGKVWRLRNAPTESQIHDIAFWLSDVHRDSTGLSTDSLHDAGYPGASA 501
Query: 493 LGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEV 552
LGD +CG+A KI SKD +FWFRSHTA EI+WGGAKHDS D R+MHPR SFKAFLEV
Sbjct: 502 LGDMICGMAVAKINSKDIIFWFRSHTAAEIRWGGAKHDSSDMDDSRRMHPRLSFKAFLEV 561
Query: 553 VKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNE 612
VK +SLPW D EMDAIHSLQLILRG+L D + ++ D +++ + EL+ +T+E
Sbjct: 562 VKMKSLPWTDYEMDAIHSLQLILRGTLNDASKPKREASLDNQIGDLKLDGLAELQAVTSE 621
Query: 613 MVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNML 672
MVRL+ETA VPILAVD +G VNGWN KAAELTGL VD AIG ++ LV SV VV+ ML
Sbjct: 622 MVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHILTLVEESSVPVVQRML 681
Query: 673 SSAF 676
A
Sbjct: 682 YLAL 685
>gi|388458240|gb|AFK30986.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 823 bits (2125), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/674 (61%), Positives = 506/674 (75%), Gaps = 23/674 (3%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA---LTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +L GYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVGHVRELIGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
GA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 SGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AV G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVGTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAF 676
+S + V +LS A
Sbjct: 716 ESEETVNKLLSRAL 729
>gi|388458326|gb|AFK31029.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 823 bits (2125), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/674 (61%), Positives = 506/674 (75%), Gaps = 23/674 (3%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA---LTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QP L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPQCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
PGA ALGDAV G+A IT D+LFW RSHTAKEIKWGGAKH KD G++MH RSSFK
Sbjct: 536 PGAAALGDAVSGMAVAYITPSDYLFWIRSHTAKEIKWGGAKHHPEDKDDGQRMHSRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAF 676
+S + V +LS A
Sbjct: 716 ESEETVNKLLSRAL 729
>gi|57791670|gb|AAW56603.1| phytochrome D [Arabidopsis thaliana]
gi|57791672|gb|AAW56604.1| phytochrome D [Arabidopsis thaliana]
Length = 1164
Score = 823 bits (2125), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/663 (60%), Positives = 496/663 (74%), Gaps = 14/663 (2%)
Query: 28 QTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLIQPFGC 82
Q ++DA+L F++S FDYS S+ + S+VP ++AYL R+QRG QPFGC
Sbjct: 62 QYTVDARLHAVFEQSGESGKSFDYSQSLKTAPYDSSVPEQQITAYLSRIQRGGYTQPFGC 121
Query: 83 MIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-QQDALTLGIDVRTLFTSSGAAALQKA 141
+IA++E FT++GYSENA EML L +VP+IE + + LT+G D+R+LF SS L++A
Sbjct: 122 LIAIEESTFTIIGYSENAREMLGLMSQSVPSIEDKSEVLTIGTDLRSLFKSSSYLLLERA 181
Query: 142 ANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLA 201
E+ LLNPI IH +GKPFYAILHR+DVG++IDLEP +D ++ AGA++S KLA
Sbjct: 182 FVAREITLLNPIWIHSNNTGKPFYAILHRVDVGILIDLEPARTEDPALSIAGAVQSQKLA 241
Query: 202 AKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPY 261
+AIS LQSLPSG+I LLCD +V V DLTGYDRVMVYKFHEDEHGEV+AE +R DLEPY
Sbjct: 242 VRAISHLQSLPSGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGEVLAESKRNDLEPY 301
Query: 262 LGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCH 321
+G HYPATDIPQASRFL +N+VRMI DC A PV+V+QD +L Q + L GSTLRAPHGCH
Sbjct: 302 IGLHYPATDIPQASRFLFKQNRVRMIVDCYASPVRVVQDDRLTQSICLVGSTLRAPHGCH 361
Query: 322 ARYMENMGSIASLVMSVTINEAEDELDNDQEQGR---KLWGLVVCHHTSPRFVPFPLRYA 378
A+YM NMGSIASL M+V IN E++ + GR +LWGLVVCHHTS R +PFPLRYA
Sbjct: 362 AQYMTNMGSIASLAMAVIINGNEEDGNGVNTGGRNSMRLWGLVVCHHTSARCIPFPLRYA 421
Query: 379 CEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCD 438
CEFL+Q FG+Q+N E++L+ Q+ EK +LR QT+LCDMLLRDSP GIVTQ P++MDLVKC+
Sbjct: 422 CEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLCDMLLRDSPAGIVTQRPSIMDLVKCN 481
Query: 439 GAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVC 498
GAA Y+GK + LGVTPT+ QI DI EWLL H STGLSTDSL +AGYP A ALGDAVC
Sbjct: 482 GAAFLYQGKYYSLGVTPTDSQINDIVEWLLANHSDSTGLSTDSLGDAGYPRAAALGDAVC 541
Query: 499 GIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSL 558
G+A IT +DFLFWFRSHT KEIKWGGAKH KD G++M+PRSSF+AFLEVVK R
Sbjct: 542 GMAVACITKRDFLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMNPRSSFQAFLEVVKSRCQ 601
Query: 559 PWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVN---VPSVDDRIEK-IDELRIITNEMV 614
PWE EMDAIHSLQLILR S ++ A DSK P DD +++ + E+ + EMV
Sbjct: 602 PWETAEMDAIHSLQLILRDSFKESEAMDSKAAAAGAVQPHGDDMVQQGMQEIGAVAREMV 661
Query: 615 RLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLS 673
RLI+TA VPI AVD G +NGWN+K AELTGL+V+ A+G +LV +L+ + + V +LS
Sbjct: 662 RLIKTATVPIFAVDIDGCINGWNAKIAELTGLSVEDAMGKSLVRELIYKEYKETVDRLLS 721
Query: 674 SAF 676
SA
Sbjct: 722 SAL 724
>gi|363547677|gb|AEW26881.1| phytochrome P [Encephalartos bubalinus]
Length = 582
Score = 822 bits (2124), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/594 (67%), Positives = 479/594 (80%), Gaps = 15/594 (2%)
Query: 84 IAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAAN 143
+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A +L+KAA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSALSLEKAAA 59
Query: 144 FGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAK 203
E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D + AGA++S KLA +
Sbjct: 60 AQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAATSVAGAVQSQKLAVR 117
Query: 204 AISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLG 263
AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR DLEPYLG
Sbjct: 118 AISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 264 FHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHAR 323
HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRAPHGCHA+
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHGCHAQ 237
Query: 324 YMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLI 383
YM +MGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLRYACEFL+
Sbjct: 238 YMASMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLRYACEFLM 286
Query: 384 QVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALY 443
Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALY
Sbjct: 287 QAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 346
Query: 444 YRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAV 503
Y G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYP A +LGDAVCG+AA
Sbjct: 347 YGGMVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMAAA 406
Query: 504 KITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDV 563
+IT+KDFLFWFRSHTAKEIKWGGAKH KD R+MHPRSSFKAFLEVVK+RSLPWE+V
Sbjct: 407 RITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDDRRMHPRSSFKAFLEVVKRRSLPWENV 466
Query: 564 EMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVP 623
EMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRLIETA P
Sbjct: 467 EMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAP 526
Query: 624 ILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
ILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 527 ILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHAL 580
>gi|388458314|gb|AFK31023.1| phytochrome b, partial [Oryza sativa Japonica Group]
Length = 1171
Score = 822 bits (2123), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/674 (61%), Positives = 506/674 (75%), Gaps = 23/674 (3%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA---LTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
R +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 ARCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
GA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 SGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAF 676
+S + +LS A
Sbjct: 716 ESEETENKLLSRAL 729
>gi|388458214|gb|AFK30973.1| phytochrome b, partial [Oryza sativa Indica Group]
gi|388458222|gb|AFK30977.1| phytochrome b, partial [Oryza sativa Indica Group]
Length = 1171
Score = 822 bits (2123), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/674 (61%), Positives = 506/674 (75%), Gaps = 23/674 (3%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA---LTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VI LEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIGLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ L CD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLPCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
GA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 SGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAF 676
+S + V +LS A
Sbjct: 716 ESEETVNKLLSRAL 729
>gi|255642598|gb|ACU21558.1| phytochrome B [Medicago sativa]
Length = 1061
Score = 822 bits (2122), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/626 (62%), Positives = 482/626 (76%), Gaps = 9/626 (1%)
Query: 60 PSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD- 118
P ++AYL ++QRG IQPFG MIAVDE +F VL Y+ENA +ML + P +VP++E D
Sbjct: 1 PEQQITAYLAKIQRGGFIQPFGSMIAVDEPSFRVLAYNENARDMLGITPQSVPSLEDDDE 60
Query: 119 ----ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
+G DVR+LFT S L+KA + E++L+NPI IH +++GKPFY ILHRIDVG
Sbjct: 61 SSSSGFNIGTDVRSLFTHSSGVLLEKAFSAREISLMNPIWIHSRSTGKPFYGILHRIDVG 120
Query: 175 LVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYD 234
+VIDLEP +D ++ AGA++S KLA +AIS+LQSLP G++ +LCD +V V +LTGYD
Sbjct: 121 VVIDLEPARSEDPALSIAGAVQSQKLAVRAISQLQSLPGGDVKVLCDAVVESVRELTGYD 180
Query: 235 RVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPP 294
RVMVYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A P
Sbjct: 181 RVMVYKFHEDEHGEVVAESKRIDLEPYMGLHYPATDIPQASRFLFKQNRVRMIVDCNASP 240
Query: 295 VKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG 354
V+V QD+ L QP+ L GSTLRAPHGCHA+YM NMGSIASL M+V IN +++ G
Sbjct: 241 VRVFQDEALVQPVCLVGSTLRAPHGCHAQYMANMGSIASLAMAVIINGNDEDGVGIGGTG 300
Query: 355 R---KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTV 411
R +LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L+AQ EK +LRTQT+
Sbjct: 301 RNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLAAQSSEKRVLRTQTL 360
Query: 412 LCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYH 471
LCDMLLRDSP GIVTQ+P++MDLVKCDGAAL+Y+G + LGVTPTE QI+DI EWLL +H
Sbjct: 361 LCDMLLRDSPTGIVTQSPSIMDLVKCDGAALFYQGNYYPLGVTPTESQIRDIIEWLLAFH 420
Query: 472 RGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDS 531
STGLSTDSL +AGYPGA +LGDAVCG+A IT KDFLFWFRSHTAKEIKWGGAKH
Sbjct: 421 GDSTGLSTDSLADAGYPGAASLGDAVCGMAVAYITEKDFLFWFRSHTAKEIKWGGAKHHP 480
Query: 532 GGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIV 591
KD G++MHPRSSFKAFLEVVK RS+ W++ EMDAIHSLQLILR S ++ DSK +V
Sbjct: 481 EDKDDGQRMHPRSSFKAFLEVVKSRSMQWDNAEMDAIHSLQLILRDSFKEAENNDSKAVV 540
Query: 592 NVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
+ + ++ +DEL + EMVRLIETA PI AVD +G +NGWN+K +ELTGL V+ A
Sbjct: 541 HTHMAELELQGVDELSSVAREMVRLIETATAPIFAVDVNGRINGWNAKVSELTGLLVEDA 600
Query: 652 IGTALV-DLVAGDSVDVVKNMLSSAF 676
+G +L+ DLV +S + V +LS A
Sbjct: 601 MGKSLLHDLVYKESQETVDKLLSHAL 626
>gi|406685313|gb|AFS51097.1| phytochrome P, partial [Athrotaxis selaginoides]
Length = 594
Score = 821 bits (2121), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/595 (67%), Positives = 471/595 (79%), Gaps = 15/595 (2%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLA----PHAVPNIEQQDALT 121
AYL R+QRG IQPFGCM+AV+E +F ++ YSENA EMLD A +VP++E + A+
Sbjct: 1 AYLSRMQRGGRIQPFGCMLAVEENSFRIIAYSENAAEMLDAAGKSESQSVPDMEIRVAVR 60
Query: 122 LGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEP 181
+G DVR LF A L++AA E+++ NPI K SGKPFYAI+HRIDVG+VIDLEP
Sbjct: 61 IGSDVRRLFKPWSARNLERAAMTQEISVSNPIAAESK-SGKPFYAIVHRIDVGIVIDLEP 119
Query: 182 VNPDDVPV---------TAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTG 232
V ++ A GA+ S +LA +AISRLQ++P+G+I LLCD +V EV +LTG
Sbjct: 120 VRREEAAALVAWGGAEGMAGGAMPSQRLAVRAISRLQAVPNGDIGLLCDAVVEEVRELTG 179
Query: 233 YDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLA 292
YDRVMVYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC
Sbjct: 180 YDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRV 239
Query: 293 PPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTIN-EAEDELDNDQ 351
PV VIQ ++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V +N DE
Sbjct: 240 SPVSVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIVNGNGNDEEGGSG 299
Query: 352 EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTV 411
KLWGLVVCHHTSPR VPFPLR AC FL+Q FG+Q+N E++L+AQL E +ILRTQT+
Sbjct: 300 RTSMKLWGLVVCHHTSPRAVPFPLRSACGFLMQTFGLQINMELQLAAQLTENNILRTQTL 359
Query: 412 LCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYH 471
LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALYY GK WLLGVTPTE QIKDIA+WLLEYH
Sbjct: 360 LCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGKFWLLGVTPTEAQIKDIADWLLEYH 419
Query: 472 RGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDS 531
STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 420 GDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHP 479
Query: 532 GGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIV 591
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD D+K +V
Sbjct: 480 DDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSDTKTMV 539
Query: 592 NVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGL 646
+ D +++ IDEL + +EMVRLIETA PILAVD+ G VNGWN+K AELTGL
Sbjct: 540 HAQLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSGGIVNGWNAKVAELTGL 594
>gi|297800528|ref|XP_002868148.1| phytochrome D [Arabidopsis lyrata subsp. lyrata]
gi|297313984|gb|EFH44407.1| phytochrome D [Arabidopsis lyrata subsp. lyrata]
Length = 1165
Score = 821 bits (2120), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/691 (58%), Positives = 504/691 (72%), Gaps = 16/691 (2%)
Query: 2 SSKSTNKTNYS-RSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSS 55
+SK+ N ++ A ++ ++ Q ++DA+L F++S FDYS S+ +
Sbjct: 36 ASKAQRSQNQQPQNHGAGTESTSKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLKTAPY 95
Query: 56 TSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE 115
+VP ++AYL R+QRG QPFGC+IAV+E FT++GYSENA EML L +VP+I+
Sbjct: 96 DPSVPEQQITAYLSRIQRGGYTQPFGCLIAVEESTFTIIGYSENAREMLGLMSQSVPSIK 155
Query: 116 Q-QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
+ + LT+G D+R+LF SS L++A E+ LLNPI IH K +GKPFYAILHR+DVG
Sbjct: 156 EISEVLTIGTDLRSLFKSSSIVLLERAFVAREITLLNPIWIHSKNTGKPFYAILHRVDVG 215
Query: 175 LVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYD 234
++IDLEP +D ++ AGA++S KLA +AIS LQSLP G+I LLCD +V+ V DLTGYD
Sbjct: 216 ILIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTVVDSVRDLTGYD 275
Query: 235 RVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPP 294
RVMVYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A P
Sbjct: 276 RVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCYASP 335
Query: 295 VKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG 354
V+V+QD +L Q + L GSTLRAPHGCHA+YM NMGSIASL M+V IN E++ + G
Sbjct: 336 VRVVQDDRLTQSICLVGSTLRAPHGCHAQYMTNMGSIASLAMAVIINGNEEDGNGGVNTG 395
Query: 355 ----RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQT 410
+LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK +LR QT
Sbjct: 396 GRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLALQVSEKRVLRMQT 455
Query: 411 VLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEY 470
+LCDMLLRDSP GIVTQ P++MDLVKC+GAA Y+GK + LGV PTE QI DI EWLL
Sbjct: 456 LLCDMLLRDSPTGIVTQRPSIMDLVKCNGAAFLYQGKYYSLGVAPTEAQINDIVEWLLAN 515
Query: 471 HRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHD 530
H STGLSTDSL +AGYP A ALGDAVCG+A IT +DFLFWFRSHT KEIKWGGAKH
Sbjct: 516 HSDSTGLSTDSLGDAGYPRAAALGDAVCGMAVACITKRDFLFWFRSHTEKEIKWGGAKHH 575
Query: 531 SGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMI 590
KD G++MHPRSSF+AFLEVVK + PWE EMDAIHSLQLILR S ++ A DSK
Sbjct: 576 PEDKDDGQRMHPRSSFQAFLEVVKSQCQPWETAEMDAIHSLQLILRDSFKESEAMDSKAS 635
Query: 591 VN---VPSVDDRIEK-IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGL 646
P DD E+ + E+ + EM+RLIETA VPI AVD G +NGWN+K AELTGL
Sbjct: 636 APGGVQPHGDDMAEQGMQEIGAVAREMIRLIETATVPIFAVDIDGCINGWNAKIAELTGL 695
Query: 647 TVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
+V++A+G +LV DL+ + + +LS A
Sbjct: 696 SVEEAMGKSLVRDLIYKEYKETADRLLSCAL 726
>gi|130181|sp|P06593.3|PHYA3_AVESA RecName: Full=Phytochrome A type 3; Short=AP3
gi|16111|emb|CAA26999.1| unnamed protein product [Avena sativa]
Length = 1129
Score = 820 bits (2119), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/667 (61%), Positives = 498/667 (74%), Gaps = 12/667 (1%)
Query: 22 NARVAAQTSIDAKLAEDFDES--DFDYSTSVNISSSTSNVP---SSTVSAYLQRVQRGRL 76
ARV AQT++DA+L +++ES FDYS V V S V AYLQ +Q+G+L
Sbjct: 19 QARVLAQTTLDAELNAEYEESGDSFDYSKLVEAQRDGPPVQQGRSEKVIAYLQHIQKGKL 78
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQ FGC++A+DE++F V+ +SENAPEML HAVP+++ L +G +VR+LF+ GA
Sbjct: 79 IQTFGCLLALDEKSFNVIAFSENAPEMLTTVSHAVPSVDDPPRLGIGTNVRSLFSDQGAT 138
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
AL KA F +V+LLNPIL+ CKTSGKPFYAI+HR LV+D EPV P + P TAAGAL+
Sbjct: 139 ALHKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQ 198
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
SYKLAAKAIS++QSLP G++ +LC+ +V EV DLTGYDRVM YKFHED+HGEV +E +P
Sbjct: 199 SYKLAAKAISKIQSLPGGSMEVLCNTVVKEVFDLTGYDRVMAYKFHEDDHGEVFSEITKP 258
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
LEPYLG HYPATDIPQA+R L MKNKVRMICDC A +KVI+ + L +SLCGS LRA
Sbjct: 259 GLEPYLGLHYPATDIPQAARLLFMKNKVRMICDCRARSIKVIEAEALPFDISLCGSALRA 318
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ------GRKLWGLVVCHHTSPRF 370
PH CH +YMENM SIASLVM+V +NE E++ + + EQ +KLWGL+VCHH SPR+
Sbjct: 319 PHSCHLQYMENMNSIASLVMAVVVNENEEDDEAESEQPAQQQKKKKLWGLLVCHHESPRY 378
Query: 371 VPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD-SPVGIVTQTP 429
VPFPLRYACEFL QVF V VN+E EL QLREK+IL+ QT+L DML R+ SP+ IV+ TP
Sbjct: 379 VPFPLRYACEFLAQVFAVHVNREFELEKQLREKNILKMQTMLSDMLFREASPLTIVSGTP 438
Query: 430 NVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPG 489
N+MDLVKCDGAAL Y GK+W L PTE QI DIA WL + HR STGLSTDSL +AGYPG
Sbjct: 439 NIMDLVKCDGAALLYGGKVWRLRNAPTESQIHDIAFWLSDVHRDSTGLSTDSLHDAGYPG 498
Query: 490 ALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAF 549
A ALGD +CG+A KI SKD LFWFRSHTA EI+WGGAK+D D R+MHPR SFKAF
Sbjct: 499 AAALGDMICGMAVAKINSKDILFWFRSHTAAEIRWGGAKNDPSDMDDSRRMHPRLSFKAF 558
Query: 550 LEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRII 609
LEVVK +SLPW D EMDAIHSLQLILRG+L D + ++ D +++ + EL+ +
Sbjct: 559 LEVVKMKSLPWSDYEMDAIHSLQLILRGTLNDASKPKREASLDNQIGDLKLDGLAELQAV 618
Query: 610 TNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVK 669
T+EMVRL+ETA VPILAVD +G VNGWN KAAELTGL VD AIG ++ LV SV VV+
Sbjct: 619 TSEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHILTLVEDSSVPVVQ 678
Query: 670 NMLSSAF 676
ML A
Sbjct: 679 RMLYLAL 685
>gi|363547653|gb|AEW26869.1| phytochrome P [Ceratozamia zaragozae]
Length = 590
Score = 820 bits (2118), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/600 (65%), Positives = 479/600 (79%), Gaps = 15/600 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAAGMLDLAPQSVPTMEKE-FLTIGTDVRTLFTPSSAM 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L NPI + ++SGK FYAI+HRIDVG+VID EP+ D ++ AGA++
Sbjct: 61 SLEKAAAAQEISLANPISMQSRSSGKAFYAIVHRIDVGMVIDFEPLG--DAALSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP+G+I +LCD +V +V +LTGYDRVMVY+FHEDEHGEV+AE RR
Sbjct: 119 SQKLAVRAISRLQALPAGDIGMLCDSVVQDVRELTGYDRVMVYRFHEDEHGEVMAEMRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC + PV+V+Q +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRSAPVRVLQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVVN-----------ANTKLWGLVVCHHTSPRTVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
ACEFL+Q FG+Q+N E++L+AQ EK IL+TQT+LCDMLLRD+P+GIVTQTP++MDLV+
Sbjct: 288 CACEFLMQAFGLQLNMELQLAAQATEKRILKTQTLLCDMLLRDAPIGIVTQTPSIMDLVR 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAAL Y G +W LGV P E QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALCYGGTVWALGVAPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRS TAKEIKWGGAKH +D GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSQTAKEIKWGGAKHHPDDRDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
S PWE+ EMDAIHSLQLILRGS +D ++K +V+ D R+ ++EL + +EMVRL
Sbjct: 468 SFPWENAEMDAIHSLQLILRGSFEDIDDTETKTMVHSRLNDLRVHSMEELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A G +LV DLV DS++ V+ +L +A
Sbjct: 528 IETATAPILAVDSRGLVNGWNAKIAELTGLPVGEATGKSLVGDLVYEDSMETVERLLRNA 587
>gi|57791648|gb|AAW56592.1| phytochrome D [Arabidopsis thaliana]
Length = 1164
Score = 820 bits (2118), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/687 (58%), Positives = 500/687 (72%), Gaps = 16/687 (2%)
Query: 4 KSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSN 58
+S N+ + S A Q ++DA+L F++S FDYS S+ + S+
Sbjct: 40 RSQNQQPQNHGGGTESTNKA--IQQYTVDARLHAVFEQSGESGKSFDYSQSLKTAPYDSS 97
Query: 59 VPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-QQ 117
VP ++AYL R+QRG QPFGC+IAV+E FT++GYSENA EML L +VP+IE +
Sbjct: 98 VPEQQITAYLSRIQRGGYTQPFGCLIAVEESTFTIIGYSENAREMLGLMSQSVPSIEDKS 157
Query: 118 DALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVI 177
+ LT+G D+R+LF SS L++A E+ LLNPI IH +GKPFYAILHR+DVG++I
Sbjct: 158 EVLTIGTDLRSLFKSSSYLLLERAFVAREITLLNPIWIHSNNTGKPFYAILHRVDVGILI 217
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEP +D ++ AGA++S KLA +AIS LQSLPSG+I LLCD +V V DLTGYDRVM
Sbjct: 218 DLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPSGDIKLLCDTVVESVRDLTGYDRVM 277
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+V
Sbjct: 278 VYKFHEDEHGEVVAESKRNDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCYASPVRV 337
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-- 355
+QD +L Q + L GSTLRAPHGCHA+YM NMGSIASL M+V IN E++ + GR
Sbjct: 338 VQDDRLTQSICLVGSTLRAPHGCHAQYMTNMGSIASLAMAVIINGNEEDGNGVNTGGRNS 397
Query: 356 -KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCD 414
+LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK +LR QT+LCD
Sbjct: 398 MRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLCD 457
Query: 415 MLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGS 474
MLLRDSP GIVTQ P++MDLVKC+GAA Y+GK + LGVTPT+ QI DI EWLL H S
Sbjct: 458 MLLRDSPAGIVTQRPSIMDLVKCNGAAFLYQGKYYSLGVTPTDSQINDIVEWLLANHSDS 517
Query: 475 TGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGK 534
TGLSTDSL + GYP A ALGDAVCG+A IT +DFLFWFRSHT KEIKWGGAKH K
Sbjct: 518 TGLSTDSLGDGGYPRAAALGDAVCGMAVACITKRDFLFWFRSHTEKEIKWGGAKHHPEDK 577
Query: 535 DGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVN-- 592
D G++M+PR SF+ FLEVVK R PWE EMDAIHSLQLILR S ++ A DSK
Sbjct: 578 DDGQRMNPRCSFQTFLEVVKSRCQPWETAEMDAIHSLQLILRDSFKESEAMDSKAAAAGA 637
Query: 593 -VPSVDDRIEK-IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQ 650
P DD +++ + E+ + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V+
Sbjct: 638 VQPHGDDMVQQGMQEIGAVAREMVRLIETATVPIFAVDIDGCINGWNAKIAELTGLSVED 697
Query: 651 AIGTALV-DLVAGDSVDVVKNMLSSAF 676
A+G +LV +L+ + + V +LSSA
Sbjct: 698 AMGKSLVRELIYKEYKETVDRLLSSAL 724
>gi|57791674|gb|AAW56605.1| phytochrome D [Arabidopsis thaliana]
Length = 1164
Score = 820 bits (2118), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/663 (60%), Positives = 494/663 (74%), Gaps = 14/663 (2%)
Query: 28 QTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLIQPFGC 82
Q ++DA+L F++S FDYS S+ + S+VP ++AYL R+QRG QPFGC
Sbjct: 62 QYTVDARLHAVFEQSGESGKSFDYSQSLKTAPYDSSVPEQQITAYLSRIQRGGYTQPFGC 121
Query: 83 MIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-QQDALTLGIDVRTLFTSSGAAALQKA 141
+IAV+E FT++GYSENA EML L +VP+IE + + LT+G D+R+LF SS L++A
Sbjct: 122 LIAVEESTFTIIGYSENAREMLGLMSQSVPSIEDKSEVLTIGTDLRSLFKSSSYLLLERA 181
Query: 142 ANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLA 201
E+ LLNPI IH +GKPFYAILHR+DV ++IDLEP +D ++ AGA++S KLA
Sbjct: 182 FVAREITLLNPIWIHSNNTGKPFYAILHRVDVEILIDLEPARTEDPALSIAGAVQSQKLA 241
Query: 202 AKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPY 261
+AIS LQSLPSG+I LLCD +V V DLTGYDRVMVYKFHEDEHGEVVAE +R DLEPY
Sbjct: 242 VRAISHLQSLPSGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRNDLEPY 301
Query: 262 LGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCH 321
+G HYPATDIPQASRFL +N+VRMI DC A PV+V+QD +L Q + L GSTLRAPHGCH
Sbjct: 302 IGLHYPATDIPQASRFLFKQNRVRMIVDCYASPVRVVQDDRLTQSICLVGSTLRAPHGCH 361
Query: 322 ARYMENMGSIASLVMSVTINEAEDELDNDQEQGR---KLWGLVVCHHTSPRFVPFPLRYA 378
A+YM NMGSIASL M+V IN E++ + GR +LWGLVVCHHTS R +PFPLRYA
Sbjct: 362 AQYMTNMGSIASLAMAVIINGNEEDGNGVNTGGRNSMRLWGLVVCHHTSARCIPFPLRYA 421
Query: 379 CEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCD 438
CEFL+Q FG+Q+N E++L+ Q+ EK +LR QT+LCDMLLRDSP GIVT P++MDLVKC+
Sbjct: 422 CEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLCDMLLRDSPAGIVTXRPSIMDLVKCN 481
Query: 439 GAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVC 498
GAA Y+GK + LGVTPT+ QI DI EWLL H STGLSTDSL +AGYP A ALGDAVC
Sbjct: 482 GAAFLYQGKYYSLGVTPTDSQINDIVEWLLANHSDSTGLSTDSLGDAGYPRAAALGDAVC 541
Query: 499 GIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSL 558
G+A IT +DFLFWFRSHT KEIKWGGAKH KD G++M+PRSSF+AFLEVVK R
Sbjct: 542 GMAVACITKRDFLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMNPRSSFQAFLEVVKSRCQ 601
Query: 559 PWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVN---VPSVDDRIEK-IDELRIITNEMV 614
PWE EMDAIHSLQLILR S ++ A DSK P DD +++ + E+ + EMV
Sbjct: 602 PWETAEMDAIHSLQLILRDSFKESEAMDSKAAAAGAVQPHGDDMVQQGMQEIGAVAREMV 661
Query: 615 RLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLS 673
RLIETA VPI AVD G +NGWN+K AELTGL+V+ A+G +LV +L+ + + V +LS
Sbjct: 662 RLIETATVPIFAVDIDGCINGWNAKIAELTGLSVEDAMGKSLVRELIYKEYKETVDRLLS 721
Query: 674 SAF 676
SA
Sbjct: 722 SAL 724
>gi|57791656|gb|AAW56596.1| phytochrome D [Arabidopsis thaliana]
gi|57791658|gb|AAW56597.1| phytochrome D [Arabidopsis thaliana]
Length = 1164
Score = 820 bits (2118), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/663 (60%), Positives = 494/663 (74%), Gaps = 14/663 (2%)
Query: 28 QTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLIQPFGC 82
Q ++DA+L F++S FDYS S+ + S+VP ++AYL R+QRG QPFGC
Sbjct: 62 QYTVDARLHAVFEQSGESGKSFDYSQSLKTAPYDSSVPEQQITAYLSRIQRGGYTQPFGC 121
Query: 83 MIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-QQDALTLGIDVRTLFTSSGAAALQKA 141
+IAV+E FT++GYSENA EML L +VP+IE + + LT+G D+R+LF SS L++A
Sbjct: 122 LIAVEESTFTIIGYSENAREMLGLMSQSVPSIEDKSEVLTIGTDLRSLFKSSSYLLLERA 181
Query: 142 ANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLA 201
E+ LLNPI IH +GKPFYAILHR+DVG++IDLEP +D ++ AGA++S KLA
Sbjct: 182 FVAREITLLNPIWIHSNNTGKPFYAILHRVDVGILIDLEPARTEDPALSIAGAVQSQKLA 241
Query: 202 AKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPY 261
+AIS LQSLPSG+I LLCD +V V DLTGYDRVMVYKF EDEHGEVVAE +R DLEPY
Sbjct: 242 VRAISHLQSLPSGDIKLLCDTVVESVRDLTGYDRVMVYKFREDEHGEVVAESKRNDLEPY 301
Query: 262 LGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCH 321
+G HYPATDIPQASRFL +N+VRMI DC A V+V+QD +L Q + L GSTLRAPHGCH
Sbjct: 302 IGLHYPATDIPQASRFLFKQNRVRMIVDCYASAVRVVQDDRLTQSICLVGSTLRAPHGCH 361
Query: 322 ARYMENMGSIASLVMSVTINEAEDELDNDQEQGR---KLWGLVVCHHTSPRFVPFPLRYA 378
A+YM NMGSIASL M+V IN E++ + GR +LWGLVVCHHTS R +PFPLRYA
Sbjct: 362 AQYMTNMGSIASLAMAVIINGNEEDGNGVNTGGRNSMRLWGLVVCHHTSARCIPFPLRYA 421
Query: 379 CEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCD 438
CEFL+Q FG+Q+N E++L+ Q+ EK +LR QT+LCDMLLRDSP GIVTQ P++MDLVKC+
Sbjct: 422 CEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLCDMLLRDSPAGIVTQRPSIMDLVKCN 481
Query: 439 GAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVC 498
GAA Y+GK + LGVTPT+ QI DI EWLL H STGLSTDSL +AGYP A ALGDAVC
Sbjct: 482 GAAFLYQGKYYSLGVTPTDSQINDIVEWLLANHSDSTGLSTDSLGDAGYPRAAALGDAVC 541
Query: 499 GIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSL 558
G+A IT +DFLFWFRSHT KEIKWGGAKH KD G++M+PRSSF+AFLEVVK R
Sbjct: 542 GMAIACITKRDFLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMNPRSSFQAFLEVVKSRCQ 601
Query: 559 PWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVN---VPSVDDRIEK-IDELRIITNEMV 614
PWE EMDAIHSLQLILR S ++ A DSK P DD +++ + E+ + EMV
Sbjct: 602 PWETAEMDAIHSLQLILRDSFKESEAMDSKAAAAGAVQPHGDDMVQQGMQEIGAVAREMV 661
Query: 615 RLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLS 673
RLIETA VPI AVD G +NGWN+K AELTGL+V+ AIG +LV +L+ + + V +LS
Sbjct: 662 RLIETATVPIFAVDIDGCINGWNAKIAELTGLSVEDAIGKSLVRELIYKEYKETVDRLLS 721
Query: 674 SAF 676
SA
Sbjct: 722 SAL 724
>gi|57791662|gb|AAW56599.1| phytochrome D [Arabidopsis thaliana]
Length = 1164
Score = 820 bits (2117), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/663 (60%), Positives = 494/663 (74%), Gaps = 14/663 (2%)
Query: 28 QTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLIQPFGC 82
Q ++DA+L F++S FDYS S+ + S+VP ++AYL R+QRG QPFGC
Sbjct: 62 QYTVDARLHAVFEQSGESGKSFDYSQSLKTAPYDSSVPEQQITAYLSRIQRGGYTQPFGC 121
Query: 83 MIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-QQDALTLGIDVRTLFTSSGAAALQKA 141
+IAV+E FT++GYSENA EML L +VP+IE + + LT+G D+R+LF SS L++A
Sbjct: 122 LIAVEESTFTIIGYSENAREMLGLMSQSVPSIEDKSEVLTIGTDLRSLFKSSSYLLLERA 181
Query: 142 ANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLA 201
E+ LLNPI IH +GKPFYAILHR+DVG++IDLEP +D ++ AGA++S KLA
Sbjct: 182 FVAREITLLNPIWIHSNNTGKPFYAILHRVDVGILIDLEPARTEDPALSIAGAVQSQKLA 241
Query: 202 AKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPY 261
+AIS LQSLPSG+I LLCD +V V DLTGYDRVMVYKFHEDEHGEVVAE +R DLEPY
Sbjct: 242 VRAISHLQSLPSGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRNDLEPY 301
Query: 262 LGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCH 321
+G HYPATDIPQASRFL +N+VRMI DC A PV+V+QD +L Q + L GSTLRAPHGCH
Sbjct: 302 IGLHYPATDIPQASRFLFKQNRVRMIVDCYASPVRVVQDDRLTQSICLVGSTLRAPHGCH 361
Query: 322 ARYMENMGSIASLVMSVTINEAEDELDNDQEQGR---KLWGLVVCHHTSPRFVPFPLRYA 378
A+YM NM SIASL M+V IN E++ + GR +LWGLVVCHHTS R +PFPLRYA
Sbjct: 362 AQYMTNMCSIASLAMAVIINGNEEDGNGVNTGGRNSMRLWGLVVCHHTSARCIPFPLRYA 421
Query: 379 CEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCD 438
CEFL+Q FG+Q+N E++L+ Q+ EK +LR QT+LCDMLLRDSP GIVTQ P++MDLVKC+
Sbjct: 422 CEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLCDMLLRDSPAGIVTQRPSIMDLVKCN 481
Query: 439 GAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVC 498
GAA Y+GK + LG+TPT+ QI DI EWLL H STGLSTDSL +AGYP A ALGDAVC
Sbjct: 482 GAAFLYQGKYYSLGMTPTDSQINDIVEWLLANHSDSTGLSTDSLGDAGYPRAAALGDAVC 541
Query: 499 GIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSL 558
G+A IT +DFLFWFRSHT KEIKWGGAKH KD G++M+PRSSF+AFLEVVK R
Sbjct: 542 GMAVACITKRDFLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMNPRSSFQAFLEVVKSRCQ 601
Query: 559 PWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVN---VPSVDDRI-EKIDELRIITNEMV 614
PWE EMDAIHSLQLILR S ++ A DSK P DD + + + E+ + EMV
Sbjct: 602 PWETAEMDAIHSLQLILRDSFKESEAMDSKAAAAGAVQPHGDDMVXQGMQEIGAVAREMV 661
Query: 615 RLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLS 673
RLIETA VPI AVD G +NGWN+K AELTGL+V+ A+G +LV +L+ + + V +LS
Sbjct: 662 RLIETATVPIFAVDIDGCINGWNAKIAELTGLSVEDAMGKSLVRELIYKEYKETVDRLLS 721
Query: 674 SAF 676
SA
Sbjct: 722 SAL 724
>gi|15234859|ref|NP_193360.1| phytochrome D [Arabidopsis thaliana]
gi|12644264|sp|P42497.2|PHYD_ARATH RecName: Full=Phytochrome D
gi|2244983|emb|CAB10404.1| phytochrome D [Arabidopsis thaliana]
gi|7268374|emb|CAB78667.1| phytochrome D [Arabidopsis thaliana]
gi|332658321|gb|AEE83721.1| phytochrome D [Arabidopsis thaliana]
Length = 1164
Score = 819 bits (2116), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/687 (58%), Positives = 501/687 (72%), Gaps = 16/687 (2%)
Query: 4 KSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSN 58
+S N+ + S A Q ++DA+L F++S FDYS S+ + S+
Sbjct: 40 RSQNQQPQNHGGGTESTNKA--IQQYTVDARLHAVFEQSGESGKSFDYSQSLKTAPYDSS 97
Query: 59 VPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-QQ 117
VP ++AYL R+QRG QPFGC+IAV+E FT++GYSENA EML L +VP+IE +
Sbjct: 98 VPEQQITAYLSRIQRGGYTQPFGCLIAVEESTFTIIGYSENAREMLGLMSQSVPSIEDKS 157
Query: 118 DALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVI 177
+ LT+G D+R+LF SS L++A E+ LLNPI IH +GKPFYAILHR+DVG++I
Sbjct: 158 EVLTIGTDLRSLFKSSSYLLLERAFVAREITLLNPIWIHSNNTGKPFYAILHRVDVGILI 217
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEP +D ++ AGA++S KLA +AIS LQSLPSG+I LLCD +V V DLTGYDRVM
Sbjct: 218 DLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPSGDIKLLCDTVVESVRDLTGYDRVM 277
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+V
Sbjct: 278 VYKFHEDEHGEVVAESKRNDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCYASPVRV 337
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-- 355
+QD +L Q + L GSTLRAPHGCHA+YM NMGSIASL M+V IN E++ + GR
Sbjct: 338 VQDDRLTQFICLVGSTLRAPHGCHAQYMTNMGSIASLAMAVIINGNEEDGNGVNTGGRNS 397
Query: 356 -KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCD 414
+LWGLVVCHHTS R +PFPLRYACEFL+Q FG+Q+N E++L+ Q+ EK +LR QT+LCD
Sbjct: 398 MRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLCD 457
Query: 415 MLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGS 474
MLLRDSP GIVTQ P++MDLVKC+GAA Y+GK + LGVTPT+ QI DI EWL+ H S
Sbjct: 458 MLLRDSPAGIVTQRPSIMDLVKCNGAAFLYQGKYYPLGVTPTDSQINDIVEWLVANHSDS 517
Query: 475 TGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGK 534
TGLSTDSL +AGYP A ALGDAVCG+A IT +DFLFWFRSHT KEIKWGGAKH K
Sbjct: 518 TGLSTDSLGDAGYPRAAALGDAVCGMAVACITKRDFLFWFRSHTEKEIKWGGAKHHPEDK 577
Query: 535 DGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVN-- 592
D G++M+PRSSF+ FLEVVK R PWE EMDAIHSLQLILR S ++ A DSK
Sbjct: 578 DDGQRMNPRSSFQTFLEVVKSRCQPWETAEMDAIHSLQLILRDSFKESEAMDSKAAAAGA 637
Query: 593 -VPSVDDRIEK-IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQ 650
P DD +++ + E+ + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V+
Sbjct: 638 VQPHGDDMVQQGMQEIGAVAREMVRLIETATVPIFAVDIDGCINGWNAKIAELTGLSVED 697
Query: 651 AIGTALV-DLVAGDSVDVVKNMLSSAF 676
A+G +LV +L+ + + V +LS A
Sbjct: 698 AMGKSLVRELIYKEYKETVDRLLSCAL 724
>gi|57791676|gb|AAW56606.1| phytochrome D [Arabidopsis halleri]
Length = 1165
Score = 819 bits (2116), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/690 (58%), Positives = 503/690 (72%), Gaps = 15/690 (2%)
Query: 2 SSKSTNKTNYS-RSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSS 55
+SK+ N ++ A ++ ++ Q ++DA+L F++S FDYS S+ +
Sbjct: 36 ASKAQRSQNQQPQNHGAGTESTSKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLKTAPY 95
Query: 56 TSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE 115
+VP ++AYL R+QRG QPFGC+IAV+E FT++GYSENA EML L +VP+IE
Sbjct: 96 DPSVPEQQITAYLSRIQRGGYTQPFGCLIAVEESTFTIIGYSENAREMLGLMSQSVPSIE 155
Query: 116 Q-QDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
+ + LT+G D+R+LF SS L++A E+ LLNPI IH K +GKPFYAILHR+DVG
Sbjct: 156 EISEVLTIGTDLRSLFKSSSIVLLERAFVAREITLLNPIWIHSKNTGKPFYAILHRVDVG 215
Query: 175 LVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYD 234
++IDLEP +D ++ AGA++S KLA +AIS LQSLP G+I LLCD +V+ V DLTGYD
Sbjct: 216 ILIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTVVDSVRDLTGYD 275
Query: 235 RVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPP 294
RVMVYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A P
Sbjct: 276 RVMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCYASP 335
Query: 295 VKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG 354
V+V+QD +L Q + L GSTLRAPHGCHA+YM NMGSIASL M++ IN E++ + G
Sbjct: 336 VRVVQDDRLTQSICLVGSTLRAPHGCHAQYMTNMGSIASLAMAIIINGNEEDGNGVNTGG 395
Query: 355 R---KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTV 411
R +LWGLVVCHHTS R +PFPLR ACEFL+Q FG+Q+N E++L+ Q+ EK +LR QT+
Sbjct: 396 RNSMRLWGLVVCHHTSARCIPFPLRCACEFLMQAFGLQLNMELQLALQVSEKRVLRMQTL 455
Query: 412 LCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYH 471
LCDMLLRDSP GIVTQ P++MDLVKC+GAA Y+GK + LGV PTE QI DI EWLL H
Sbjct: 456 LCDMLLRDSPTGIVTQRPSIMDLVKCNGAAFLYQGKYYSLGVAPTEAQINDIVEWLLANH 515
Query: 472 RGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDS 531
STGLSTDSL +AGYP A ALGDAVCG+A IT +DFLFWFRSHT KEIKWGGAKH
Sbjct: 516 SDSTGLSTDSLGDAGYPRAAALGDAVCGMAVACITKRDFLFWFRSHTEKEIKWGGAKHHP 575
Query: 532 GGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIV 591
KD G++M PR+SF+AFLEVVK R PWE EMDAIHSLQLILR S ++ A DSK
Sbjct: 576 EDKDDGQRMXPRASFQAFLEVVKSRCQPWETAEMDAIHSLQLILRDSFKESEAMDSKASA 635
Query: 592 N---VPSVDDRIEK-IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLT 647
P DD E+ + E+ + EM+RLIETA VPI AVD G +NGWN+K AELTGL+
Sbjct: 636 PGGVQPHGDDMAEQGLQEIGTVAREMIRLIETATVPIFAVDIDGCINGWNAKIAELTGLS 695
Query: 648 VDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
V++A+G +LV DL+ + + +LS A
Sbjct: 696 VEEAMGKSLVRDLIYKEYEETADRLLSCAL 725
>gi|388458358|gb|AFK31045.1| phytochrome b, partial [Oryza rufipogon]
Length = 1171
Score = 819 bits (2116), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/674 (61%), Positives = 507/674 (75%), Gaps = 23/674 (3%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA---LTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+P+GC+A+YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPNGCYAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQT+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLST SL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTVSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
GA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 SGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAF 676
+S + V +LS A
Sbjct: 716 ESEETVNKLLSRAL 729
>gi|363547643|gb|AEW26864.1| phytochrome P [Ceratozamia mirandae]
Length = 590
Score = 818 bits (2114), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/601 (65%), Positives = 479/601 (79%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAAGMLDLAPQSVPTMEKE-FLTIGTDVRTLFTPSSAM 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L NPI + ++SGK FYAI+HRIDVG+VID EP+ D ++ AGA++
Sbjct: 61 SLEKAAAAQEISLANPISMQSRSSGKAFYAIVHRIDVGMVIDFEPLG--DAALSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP+G+I +LCD +V +V +LTGYDRVMVY+FHEDEHGEV+AE RR
Sbjct: 119 SQKLAVRAISRLQALPAGDIGMLCDSVVQDVRELTGYDRVMVYRFHEDEHGEVMAEMRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC + PV+V+Q +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRSAPVRVLQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+V +N KLWGLVVCHH SPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVVN-----------ANTKLWGLVVCHHASPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
ACEFL+Q FG+Q+N E++L+AQ EK IL+TQT+LCDMLLRD+P+GIVTQTP++MDLV+
Sbjct: 288 CACEFLMQAFGLQLNMELQLAAQATEKRILKTQTLLCDMLLRDAPIGIVTQTPSIMDLVR 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAAL Y G +W LGV P E QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALCYGGTVWALGVAPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRS TAKEIKWGGAKH +D GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSQTAKEIKWGGAKHHPDDRDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
S PWE+ EMDAIHSLQLILRGS +D ++K +V+ D R++ ++EL + +EMVRL
Sbjct: 468 SFPWENAEMDAIHSLQLILRGSFEDIDDAETKTMVHSRLNDLRVQSMEELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A G +LV DLV DS++ V+ +L +A
Sbjct: 528 IETATAPILAVDSCGLVNGWNAKIAELTGLPVGEATGKSLVGDLVYEDSMETVERLLRNA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|406685461|gb|AFS51171.1| phytochrome P, partial [Araucaria biramulata]
Length = 629
Score = 818 bits (2114), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/593 (67%), Positives = 471/593 (79%), Gaps = 24/593 (4%)
Query: 108 PHAVPNIEQQD-----------ALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIH 156
P +VPN++ +T+G DVRTLFT+S A AL+KAA E++L+NPI +H
Sbjct: 2 PQSVPNMDMDRDEAMTSHGGGRVMTIGTDVRTLFTTSSARALEKAAMAHEISLMNPIWVH 61
Query: 157 CKTSGKPFYAILHRIDVGLVIDLEPVNPD-----DVPVTAAGALKSYKLAAKAISRLQSL 211
K + KPFYAI+HRIDVG+V+DLEPV D ++AAGA++S KLA +AISRLQSL
Sbjct: 62 SKNTNKPFYAIVHRIDVGMVMDLEPVRTGSGGGGDAALSAAGAVQSQKLAVRAISRLQSL 121
Query: 212 PSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDI 271
P+G+I LLCD +V +V +LTGYDRVMVYKFHEDEHGEV+AE RR DLEPYLG HYPATDI
Sbjct: 122 PAGDIGLLCDTVVEDVRELTGYDRVMVYKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDI 181
Query: 272 PQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSI 331
PQASRFL M+N+VRMICDC A PVKVIQ ++L QPL L GSTLRAPHGCHA+YM NMGSI
Sbjct: 182 PQASRFLFMQNRVRMICDCRAAPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSI 241
Query: 332 ASLVMSVTINEAEDELDNDQEQGR-------KLWGLVVCHHTSPRFVPFPLRYACEFLIQ 384
ASLVM+V IN EDE G KLWGLVVCHHTSPR VPFPLRYACEFL+Q
Sbjct: 242 ASLVMAVVINGNEDEGGGGGGSGSGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQ 301
Query: 385 VFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYY 444
FG+Q+N E++L+AQL EKHILRTQT+LCDMLLRD+P+GIVT +P++MDLVKCDGAALYY
Sbjct: 302 AFGLQLNMELQLAAQLTEKHILRTQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYY 361
Query: 445 RGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVK 504
G W+LGVTPTE QIKDIA+WLLEYH STGLSTDSL +AGYPGA +LGDAVCG+AA +
Sbjct: 362 GGMCWMLGVTPTEAQIKDIADWLLEYHVDSTGLSTDSLADAGYPGAASLGDAVCGMAAAR 421
Query: 505 ITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVE 564
ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+VE
Sbjct: 422 ITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVE 481
Query: 565 MDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPI 624
MDAIHSLQLILRGS QD ++K +V+ D +++ IDEL + +EMVRLIETA PI
Sbjct: 482 MDAIHSLQLILRGSFQDIDDSNTKTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPI 541
Query: 625 LAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
LAVD++G +NGWN+K AELTGL V +A+G +LV DL+ +S + V ML A
Sbjct: 542 LAVDSNGLINGWNAKVAELTGLPVGEAMGKSLVHDLIFEESANTVDKMLYHAL 594
>gi|363547647|gb|AEW26866.1| phytochrome P [Ceratozamia morettii]
Length = 590
Score = 818 bits (2113), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/601 (64%), Positives = 479/601 (79%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAAGMLDLAPQSVPTMEKE-FLTIGTDVRTLFTPSSAM 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L NPI + ++SGK FYAI+HRIDVG+VID EP+ D ++ AGA++
Sbjct: 61 SLEKAAAAQEISLANPISMQSRSSGKAFYAIVHRIDVGMVIDFEPLG--DAALSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP+G+I +LCD +V +V +LTGYDRVMVY+FHEDEHGEV+AE RR
Sbjct: 119 SQKLAVRAISRLQALPAGDIGMLCDSVVQDVRELTGYDRVMVYRFHEDEHGEVMAEMRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC + PV+V+Q +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRSAPVRVLQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVVN-----------ANTKLWGLVVCHHTSPRTVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
ACEFL+Q FG+Q+N E++L+AQ EK IL+TQT+LCDMLLRD+P+GIVTQTP++MDLV+
Sbjct: 288 CACEFLMQAFGLQLNMELQLAAQATEKRILKTQTLLCDMLLRDAPIGIVTQTPSIMDLVR 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAAL Y G +W LGV P E QI+DIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALCYGGTVWALGVAPAEAQIRDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRS TAKEIKWGG KH +D GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSQTAKEIKWGGEKHHPDDRDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
S PWE+ EMDAIHSLQLILRGS +D ++K +V+ D R++ ++EL + +EMVRL
Sbjct: 468 SFPWENAEMDAIHSLQLILRGSFEDIDDTETKTMVHSRLNDLRVQSMEELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A G +LV DLV DS++ V+ +L +A
Sbjct: 528 IETATAPILAVDSRGLVNGWNAKIAELTGLPVGEATGKSLVGDLVYEDSMETVERLLRNA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|363547639|gb|AEW26862.1| phytochrome P [Ceratozamia microstrobila]
Length = 590
Score = 818 bits (2113), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/600 (65%), Positives = 478/600 (79%), Gaps = 15/600 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAAGMLDLAPQSVPTMEKE-FLTIGTDVRTLFTPSSAM 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L NPI + ++SGK FYAI+HRIDVG+VID EP+ D ++ AGA++
Sbjct: 61 SLEKAAAAQEISLANPISMQSRSSGKAFYAIVHRIDVGMVIDFEPLG--DAALSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP+G+I +LCD +V +V +LTGYDRVMVY+FHEDEHGEV+AE RR
Sbjct: 119 SQKLAVRAISRLQALPAGDIGMLCDSVVQDVRELTGYDRVMVYRFHEDEHGEVMAEMRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC + PV+V+Q +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRSAPVRVLQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVVN-----------ANAKLWGLVVCHHTSPRTVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
ACEFL+Q FG+Q+N E++L+AQ EK IL+TQT+LCDMLLRD+P+GIVTQTP++MDLV+
Sbjct: 288 CACEFLMQAFGLQLNMELQLAAQAMEKRILKTQTLLCDMLLRDAPIGIVTQTPSIMDLVR 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAAL Y G +W LGV P E QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALCYGGTVWALGVAPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRS TAKEIKWGG KH +D GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSQTAKEIKWGGEKHHPDDRDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
S PWE+ EMDAIHSLQLILRGS +D ++K +V+ D R+ ++EL + +EMVRL
Sbjct: 468 SFPWENAEMDAIHSLQLILRGSFEDIDDTETKTMVHSRLNDLRVHSMEELSSVVSEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A G +LV DLV DS++ V+ +L +A
Sbjct: 528 IETATAPILAVDSRGLVNGWNAKIAELTGLPVGEATGKSLVGDLVCEDSMETVERLLRNA 587
>gi|57791660|gb|AAW56598.1| phytochrome D [Arabidopsis thaliana]
Length = 1126
Score = 818 bits (2113), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/663 (60%), Positives = 493/663 (74%), Gaps = 14/663 (2%)
Query: 28 QTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLIQPFGC 82
Q ++DA+L F++S FDYS S+ + S+VP ++AYL R+QRG QPFGC
Sbjct: 62 QYTVDARLHAVFEQSGESGKSFDYSQSLKTAPYDSSVPEQQITAYLSRIQRGGYTQPFGC 121
Query: 83 MIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-QQDALTLGIDVRTLFTSSGAAALQKA 141
+IAV+E FT++GYSENA EML L +VP+IE + + LT+G D+R+LF SS L++A
Sbjct: 122 LIAVEESTFTIIGYSENAREMLGLMSQSVPSIEDKSEVLTIGTDLRSLFKSSSYLLLERA 181
Query: 142 ANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLA 201
E+ LLNPI IH +GKPFYAILHR+DVG++IDLEP +D ++ AGA++S KLA
Sbjct: 182 FVAREITLLNPIWIHSNNTGKPFYAILHRVDVGILIDLEPARTEDPALSIAGAVQSQKLA 241
Query: 202 AKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPY 261
+AIS LQSLPSG+I LLCD +V V DLTGYDRVMVYKF EDEHGEVVAE +R DLEPY
Sbjct: 242 VRAISHLQSLPSGDIKLLCDTVVESVRDLTGYDRVMVYKFREDEHGEVVAESKRNDLEPY 301
Query: 262 LGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCH 321
+G HYPATDIPQASRFL +N+VRMI DC A V+V+QD +L Q + L GSTLRAPHGCH
Sbjct: 302 IGLHYPATDIPQASRFLFKQNRVRMIVDCYASAVRVVQDDRLTQSICLVGSTLRAPHGCH 361
Query: 322 ARYMENMGSIASLVMSVTINEAEDELDNDQEQGR---KLWGLVVCHHTSPRFVPFPLRYA 378
A+YM NMGSIASL M+V IN E++ + GR +LWGLVVCHHTS R +PFPLRYA
Sbjct: 362 AQYMTNMGSIASLAMAVIINGNEEDGNGVNTGGRNSMRLWGLVVCHHTSARCIPFPLRYA 421
Query: 379 CEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCD 438
CEFL+Q FG+Q+N E++L+ Q+ EK +LR QT+LCDMLLRDSP GIVTQ P++MDLVKC+
Sbjct: 422 CEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLCDMLLRDSPAGIVTQRPSIMDLVKCN 481
Query: 439 GAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVC 498
GAA Y+GK + LGVTPT+ QI DI EWLL H STGLSTDSL +AGYP A ALGDAVC
Sbjct: 482 GAAFLYQGKYYSLGVTPTDSQINDIVEWLLANHSDSTGLSTDSLGDAGYPRAAALGDAVC 541
Query: 499 GIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSL 558
G+A IT +DFLFWFRSHT KEIKWGGAKH KD G++M+PRSSF+AFLEVVK R
Sbjct: 542 GMAIACITKRDFLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMNPRSSFQAFLEVVKSRCQ 601
Query: 559 PWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVN---VPSVDDRIEK-IDELRIITNEMV 614
PWE EMDAIHSLQLILR S ++ A DSK P DD +++ + E+ + EMV
Sbjct: 602 PWETAEMDAIHSLQLILRDSFKESEAMDSKAAAAGAVQPHGDDMVQQGMQEIGAVAREMV 661
Query: 615 RLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLS 673
RLIETA VPI AVD G +NGWN+K AELTGL+V+ AIG +LV +L+ + + V +LS
Sbjct: 662 RLIETATVPIFAVDIDGCINGWNAKIAELTGLSVEDAIGKSLVRELIYKEYKETVDRLLS 721
Query: 674 SAF 676
A
Sbjct: 722 XAL 724
>gi|452814|emb|CAA54072.1| phytochrome D [Arabidopsis thaliana]
Length = 1164
Score = 818 bits (2113), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/687 (58%), Positives = 500/687 (72%), Gaps = 16/687 (2%)
Query: 4 KSTNKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSN 58
+S N+ + S A Q ++DA+L F++S FDYS S+ + S+
Sbjct: 40 RSQNQQPQNHGGGTESTNKA--IQQYTVDARLHAVFEQSGESGKSFDYSQSLKTAPYDSS 97
Query: 59 VPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIE-QQ 117
VP ++AYL R+QRG QPFGC+IAV+E FT++GYSENA EML L +VP+IE +
Sbjct: 98 VPEQQITAYLSRIQRGGYTQPFGCLIAVEESTFTIIGYSENAREMLGLMSQSVPSIEDKS 157
Query: 118 DALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVI 177
+ LT+G D+R+LF SS L++A E+ LLNPI IH +GKPFYAILHR+DVG++I
Sbjct: 158 EVLTIGTDLRSLFKSSSYLLLERAFVAREITLLNPIWIHSNNTGKPFYAILHRVDVGILI 217
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEP +D ++ AGA++S KLA +AIS LQSLPSG+I LLCD +V V DLTGYDRVM
Sbjct: 218 DLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPSGDIKLLCDTVVESVRDLTGYDRVM 277
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVVAE +R DLEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+V
Sbjct: 278 VYKFHEDEHGEVVAESKRNDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCYASPVRV 337
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-- 355
+QD +L Q + L GSTLRAPHGCHA+YM NMGSIASL M+V IN E++ + GR
Sbjct: 338 VQDDRLTQFICLVGSTLRAPHGCHAQYMTNMGSIASLAMAVIINGNEEDGNGVNTGGRNS 397
Query: 356 -KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCD 414
+LWGLVVCHHTS R +PFPLRYACEF +Q FG+Q+N E++L+ Q+ EK +LR QT+LCD
Sbjct: 398 MRLWGLVVCHHTSARCIPFPLRYACEFFMQAFGLQLNMELQLALQVSEKRVLRMQTLLCD 457
Query: 415 MLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGS 474
MLLRDSP GIVTQ P++MDLVKC+GAA Y+GK + LGVTPT+ QI DI EWL+ H S
Sbjct: 458 MLLRDSPAGIVTQRPSIMDLVKCNGAAFLYQGKYYPLGVTPTDSQINDIVEWLVANHSDS 517
Query: 475 TGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGK 534
TGLSTDSL +AGYP A ALGDAVCG+A IT +DFLFWFRSHT KEIKWGGAKH K
Sbjct: 518 TGLSTDSLGDAGYPRAAALGDAVCGMAVACITKRDFLFWFRSHTEKEIKWGGAKHHPEDK 577
Query: 535 DGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVN-- 592
D G++M+PRSSF+ FLEVVK R PWE EMDAIHSLQLILR S ++ A DSK
Sbjct: 578 DDGQRMNPRSSFQTFLEVVKSRCQPWETAEMDAIHSLQLILRDSFKESEAMDSKAAAAGA 637
Query: 593 -VPSVDDRIEK-IDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQ 650
P DD +++ + E+ + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V+
Sbjct: 638 VQPHGDDMVQQGMQEIGAVAREMVRLIETATVPIFAVDIDGCINGWNAKIAELTGLSVED 697
Query: 651 AIGTALV-DLVAGDSVDVVKNMLSSAF 676
A+G +LV +L+ + + V +LS A
Sbjct: 698 AMGKSLVRELIYKEYKETVDRLLSCAL 724
>gi|406685479|gb|AFS51180.1| phytochrome P, partial [Araucaria rulei]
Length = 617
Score = 818 bits (2112), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/570 (69%), Positives = 464/570 (81%), Gaps = 13/570 (2%)
Query: 120 LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDL 179
+T+G DVRTLFT+S A AL+KAA E++L+NPI +H K + KPFYAI+HRIDVG+V+DL
Sbjct: 19 MTIGTDVRTLFTTSSARALEKAAMAHEISLMNPIWVHSKNTNKPFYAIVHRIDVGMVMDL 78
Query: 180 EPVNPD-----DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYD 234
EPV D ++AAGA++S KLA +AISRLQSLP+G+I LLCD +V +V +LTGYD
Sbjct: 79 EPVRTGSGGGGDAALSAAGAVQSQKLAVRAISRLQSLPAGDIGLLCDTVVEDVRELTGYD 138
Query: 235 RVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPP 294
RVMVYKFHEDEHGEV+AE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A P
Sbjct: 139 RVMVYKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRAAP 198
Query: 295 VKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG 354
VKVIQ ++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN EDE G
Sbjct: 199 VKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGNEDEGGGGGGSG 258
Query: 355 R-------KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILR 407
KLWGLVVCHHTSPR VPFPLRYACEFL+Q FG+Q+N E++L+AQL EKHILR
Sbjct: 259 SGSGRGSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILR 318
Query: 408 TQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWL 467
TQT+LCDMLLRD+P+GIVT +P++MDLVKCDGAALYY G W+LGVTPTE QIKDIA+WL
Sbjct: 319 TQTLLCDMLLRDAPIGIVTHSPSIMDLVKCDGAALYYGGMCWMLGVTPTEAQIKDIADWL 378
Query: 468 LEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGA 527
LEYH STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGA
Sbjct: 379 LEYHVDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGA 438
Query: 528 KHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDS 587
KH KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD ++
Sbjct: 439 KHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSNT 498
Query: 588 KMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLT 647
K +V+ D +++ IDEL + +EMVRLIETA PILAVD++G +NGWN+K AELTGL
Sbjct: 499 KTMVHARLNDLKLQGIDELSCVASEMVRLIETATAPILAVDSNGLINGWNAKVAELTGLP 558
Query: 648 VDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
V +A+G +LV DL+ +S + V ML A
Sbjct: 559 VGEAMGKSLVHDLIFEESANTVDKMLYQAL 588
>gi|363547732|gb|AEW26908.1| phytochrome P [Encephalartos msinganus]
Length = 582
Score = 818 bits (2112), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/594 (67%), Positives = 477/594 (80%), Gaps = 15/594 (2%)
Query: 84 IAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAAN 143
+AV+E+ + ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A L+KAA
Sbjct: 1 LAVEERTYRIIAYSENAVGMLDLAPQSVPTMEEE-FLTIGTDVRTLFTPSSALPLEKAAA 59
Query: 144 FGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAK 203
E++L+NPI +H K+SGKPFYAI+HRIDVG+VID EPV D + AGA++S KLA +
Sbjct: 60 AQEISLMNPIWMHSKSSGKPFYAIVHRIDVGMVIDFEPVG--DAATSVAGAVQSQKLAVR 117
Query: 204 AISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLG 263
AISRLQSLP G+I LLCD +V +V +LTGYDRVMVY+FHEDEHGEVVAE RR DLEPYLG
Sbjct: 118 AISRLQSLPGGDIGLLCDTVVEDVRELTGYDRVMVYRFHEDEHGEVVAEIRRSDLEPYLG 177
Query: 264 FHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHAR 323
HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ +L QPL L GSTLRAPHGCHA+
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRMICDCRATPVRVIQAAELRQPLCLVGSTLRAPHGCHAQ 237
Query: 324 YMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLI 383
YM +MGSIASLVM+V IN KLWGLVVCHHTSPR VPFPLRYACE L+
Sbjct: 238 YMASMGSIASLVMAVVIN-----------GNTKLWGLVVCHHTSPRAVPFPLRYACEILM 286
Query: 384 QVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALY 443
Q FG+Q+N EV+L+AQL EK IL+TQT+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALY
Sbjct: 287 QAFGLQLNMEVQLAAQLTEKRILKTQTLLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALY 346
Query: 444 YRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAV 503
Y G +W LGVTP E QIKDIA+WLLE H TGLSTDSL +AGYP A +LGDAVCG+AA
Sbjct: 347 YGGLVWALGVTPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPAAASLGDAVCGMAAA 406
Query: 504 KITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDV 563
+IT+KDFLFWFRSHTAKEIKWGGAKH KD R+MHPRSSFKAFLEVVK+RSLPWE+V
Sbjct: 407 RITAKDFLFWFRSHTAKEIKWGGAKHRPDDKDDDRRMHPRSSFKAFLEVVKRRSLPWENV 466
Query: 564 EMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVP 623
EMDAIHSLQLILRGS QD ++K +++ D R++ +DEL + +EMVRLIETA P
Sbjct: 467 EMDAIHSLQLILRGSFQDIDDSETKTMIHSRLNDLRVQSMDELSSVASEMVRLIETATAP 526
Query: 624 ILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
ILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ +L A
Sbjct: 527 ILAVDSGGFVNGWNAKLAELTGLPVGEAMGKSLVCDLVYEESMETVERLLHHAL 580
>gi|6469491|emb|CAA40795.2| phytochrome B [Oryza sativa Indica Group]
Length = 1171
Score = 817 bits (2111), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/674 (60%), Positives = 503/674 (74%), Gaps = 23/674 (3%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA---LTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S PFYAILHRIDVG+VIDLEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSNPFYAILHRIDVGVVIDLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KL +AISRLQ+LP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLVVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCH +YM NMGSIASLVM+V I+ D+ D++ +G KLWGLVVCHHTS
Sbjct: 357 TLRSPHGCHGQYMANMGSIASLVMAVIISSGGDD-DHNIARGSIPSAMKLWGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRT T+LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTGTLLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
GA LGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 SGAADLGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAF 676
+S + V +LS A
Sbjct: 716 ESEETVNKLLSRAL 729
>gi|406685609|gb|AFS51245.1| phytochrome P, partial [Podocarpus totara]
Length = 600
Score = 817 bits (2110), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/567 (69%), Positives = 460/567 (81%), Gaps = 14/567 (2%)
Query: 118 DALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVI 177
+ LT+G DVRTLFT S A AL+KAA +++L+NPI +H + SGKPF AI+HRIDVG+VI
Sbjct: 11 EVLTIGTDVRTLFTPSSARALEKAATAPDISLMNPIWVHSQCSGKPFNAIVHRIDVGMVI 70
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEP D ++ AGA++S K A +AISRLQSLP+G+I LLCD +V +V +LTGYDRVM
Sbjct: 71 DLEPRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVM 130
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKV
Sbjct: 131 VYKFHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKV 190
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG--- 354
IQ ++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 191 IQSEELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGPS 244
Query: 355 ----RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQT 410
KLWGLVVCHHTSPR V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT
Sbjct: 245 GRSSMKLWGLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQT 304
Query: 411 VLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEY 470
+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIAEWLLEY
Sbjct: 305 LLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEY 364
Query: 471 HRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHD 530
H STGLSTDSL +AGYPGA LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 365 HGDSTGLSTDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHH 424
Query: 531 SGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMI 590
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +
Sbjct: 425 PDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTM 484
Query: 591 VNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQ 650
V+ D +++ IDEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +
Sbjct: 485 VHARLTDLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGE 544
Query: 651 AIGTALV-DLVAGDSVDVVKNMLSSAF 676
A+G +LV D+V +S + ++ ML A
Sbjct: 545 AMGKSLVHDVVLEESAECLEKMLYRAL 571
>gi|363547633|gb|AEW26859.1| phytochrome P [Ceratozamia huastecorum]
Length = 590
Score = 816 bits (2109), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/601 (65%), Positives = 477/601 (79%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ F ++ YSENA MLDLAP VP +E++ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAAGMLDLAPQLVPTMEKE-FLTIGTDVRTLFTPSSAM 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L NPI I ++SGK FYAI+HRIDVG+VID EP+ D ++ AGA++
Sbjct: 61 SLEKAAAAQEISLANPISIQSRSSGKAFYAIVHRIDVGMVIDFEPLG--DAALSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP+G+I +LCD +V +V +LTGYDRVMVY+FHEDEHGEV+AE RR
Sbjct: 119 SQKLAVRAISRLQALPAGDIGMLCDSVVQDVRELTGYDRVMVYRFHEDEHGEVMAEMRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL ++N+VRMICDC + PV+V+Q +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFIQNRVRMICDCRSAPVRVLQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVVN-----------ANTKLWGLVVCHHTSPRTVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
ACEFL+Q FG+Q+N E+ L+AQ EK IL+TQT+LCDMLLRD+P+GIVTQTP++MDLV+
Sbjct: 288 CACEFLMQAFGLQLNMELRLAAQATEKRILKTQTLLCDMLLRDAPIGIVTQTPSIMDLVR 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAAL Y G +W LGV P E QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALCYGGTVWALGVAPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRS TAKEIKWGGAKH +D R+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSQTAKEIKWGGAKHHPDDRDDARRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
S PWE+ EMDAIHSLQLILRGS +D ++K +V+ D R++ ++EL + +EMVRL
Sbjct: 468 SFPWENAEMDAIHSLQLILRGSFEDIDDTETKTMVHSRLNDLRVQSMEELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A G +LV DLV DS++ V+ +L +A
Sbjct: 528 IETATAPILAVDSRGLVNGWNAKIAELTGLPVGEATGKSLVGDLVYEDSMETVERLLRNA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|363547629|gb|AEW26857.1| phytochrome P [Ceratozamia decumbens]
Length = 590
Score = 816 bits (2108), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/601 (64%), Positives = 478/601 (79%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAAGMLDLAPQSVPTMEKE-FLTIGTDVRTLFTPSSAM 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L NPI + ++SGK FYAI+HRIDVG+VID EP+ D ++ AGA++
Sbjct: 61 SLEKAAAAQEISLANPISMQSRSSGKAFYAIVHRIDVGMVIDFEPLG--DAALSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP+G+I +LCD +V +V +LTGYDRVMVY+FHEDEHGEV+AE RR
Sbjct: 119 SQKLAVRAISRLQALPAGDIGMLCDSVVQDVRELTGYDRVMVYRFHEDEHGEVMAEMRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC + PV+V+Q +L QPL L STLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRSAPVRVLQAAELRQPLCLVSSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVVN-----------ANTKLWGLVVCHHTSPRTVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
ACEFL+Q FG+Q+N E++L+AQ EK IL+TQT+LCDMLLRD+P+GIVTQTP++MDLV+
Sbjct: 288 CACEFLMQAFGLQLNMELQLAAQATEKRILKTQTLLCDMLLRDAPIGIVTQTPSIMDLVR 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAAL Y G +W LGV P E QIKDIA+WLLE H TG STDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALCYGGTVWALGVAPAEAQIKDIADWLLECHGDWTGPSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRS TAKEIKWGGAKH +D GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSQTAKEIKWGGAKHHPDDRDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
S PWE+ EMDAIHSLQLILRGS +D ++K +V+ D R++ ++EL + +EMVRL
Sbjct: 468 SFPWENAEMDAIHSLQLILRGSFEDIDDTETKTMVHSRLNDLRVQSMEELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A G +LV DLV DS++ V+ +L +A
Sbjct: 528 IETATAPILAVDSRGLVNGWNAKIAELTGLPVGEATGKSLVGDLVYEDSMETVERLLRNA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|388458208|gb|AFK30970.1| phytochrome b, partial [Oryza sativa Indica Group]
Length = 1171
Score = 815 bits (2106), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/674 (60%), Positives = 504/674 (74%), Gaps = 23/674 (3%)
Query: 23 ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLI 77
++ AQ ++DA+L F++S FDY+ S+ S + S+ ++AYL R+QRG I
Sbjct: 59 SKAVAQYTLDARLHAVFEQSGASGRSFDYTQSLRASPTPSS--EQQIAAYLSRIQRGGHI 116
Query: 78 QPFGCMIAV-DEQNFTVLGYSENAPEMLDLAPH-AVPNIEQQDA---LTLGIDVRTLFTS 132
QPFGC +AV D+ +F +L YSEN ++LDL+PH +VP+++ ++LG D R LF
Sbjct: 117 QPFGCTLAVADDSSFRLLAYSENTADLLDLSPHHSVPSLDSSAVPPPVSLGADARLLFAP 176
Query: 133 SGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAA 192
S A L++A E++LLNP+ IH + S KPFYAILHRIDVG+VI LEP +D ++ A
Sbjct: 177 SSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIGLEPARTEDPALSIA 236
Query: 193 GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAE 252
GA++S KLA +AISRLQ+LP G++ L CD +V V +LTGYDRVMVY+FHEDEHGEVVAE
Sbjct: 237 GAVQSQKLAVRAISRLQALPGGDVKLPCDTVVEHVRELTGYDRVMVYRFHEDEHGEVVAE 296
Query: 253 CRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGS 312
RR +LEPY+G HYPATDIPQASRFL +N+VRMI DC A PV+VIQD L QPL L GS
Sbjct: 297 SRRSNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDPALTQPLCLVGS 356
Query: 313 TLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-----KLWGLVVCHHTS 367
TLR+PHGCHA+YM NMGSIASLVM+V I+ D+ D++ +G KL GLVVCHHTS
Sbjct: 357 TLRSPHGCHAQYMANMGSIASLVMAVIISSGGDD-DHNIARGSTPSAMKLRGLVVCHHTS 415
Query: 368 PRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQ 427
PR +PFPLRYACEFL+Q FG+Q+N E++L+ QL EKHILRTQ +LCDMLLRDSP GIVTQ
Sbjct: 416 PRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQALLCDMLLRDSPTGIVTQ 475
Query: 428 TPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGY 487
+P++MDLVKCDGAALYY GK + LGVTPTE QIKDI EWL H STGLSTDSL +AGY
Sbjct: 476 SPSIMDLVKCDGAALYYHGKYYPLGVTPTEVQIKDIIEWLTMCHGDSTGLSTDSLADAGY 535
Query: 488 PGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFK 547
GA ALGDAV G+A IT D+LFWFRSHTAKEIKWGGAKH KD G++MHPRSSFK
Sbjct: 536 SGAAALGDAVSGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFK 595
Query: 548 AFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD--EVAEDSKMIVN--VPSVDDRIEKI 603
AFLEVVK RSLPWE+ EMDAIHSLQLILR S +D E +SK IVN V + + I
Sbjct: 596 AFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDSAEGTSNSKAIVNGQVQLGELELRGI 655
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAG 662
DEL + EMVRLIETA VPI AVD G +NGWN+K AELTGL+V++A+G +LV DL+
Sbjct: 656 DELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFK 715
Query: 663 DSVDVVKNMLSSAF 676
+S + V +LS A
Sbjct: 716 ESEETVNKLLSRAL 729
>gi|363547651|gb|AEW26868.1| phytochrome P [Ceratozamia whitelockiana]
Length = 590
Score = 815 bits (2105), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/601 (64%), Positives = 478/601 (79%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTL T S A
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENATGMLDLAPQSVPTMEKE-FLTIGTDVRTLLTPSSAM 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L NPI + ++SGK FYAI+HRIDVG+VID EP+ D ++ AGA++
Sbjct: 61 SLEKAAAAQEISLANPISMQSRSSGKAFYAIVHRIDVGMVIDFEPLG--DAALSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP+G+I +LCD +V +V +LTGYDRVMVY+FHEDEHGEV+AE RR
Sbjct: 119 SQKLAVRAISRLQALPAGDIGMLCDSVVQDVRELTGYDRVMVYRFHEDEHGEVMAEMRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC + PV+V+Q +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRSAPVRVLQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVVNA-----------NTKLWGLVVCHHTSPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
ACEFL+Q FG+Q+N E++L+AQ EK IL+TQT+LCDMLLRD+P+GIVTQTP++MDLV+
Sbjct: 288 CACEFLMQAFGLQLNMELQLAAQATEKRILKTQTLLCDMLLRDAPIGIVTQTPSIMDLVR 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAAL Y G +W LGV E QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALCYGGTVWALGVALAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRS TAKEIKWGGAKH +D GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSQTAKEIKWGGAKHHPDDRDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
S PWE+ EMDAIHSLQLILRGS +D ++K +V+ D R++ ++EL + +EMVRL
Sbjct: 468 SFPWENAEMDAIHSLQLILRGSFEDIDDAETKTMVHSRLNDLRVQSMEELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A G +LV DLV DS++ V+ +L +A
Sbjct: 528 IETATAPILAVDSRGLVNGWNAKIAELTGLPVGEATGKSLVGDLVYEDSMETVERLLRNA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|363547635|gb|AEW26860.1| phytochrome P [Ceratozamia latifolia]
Length = 590
Score = 814 bits (2102), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/600 (64%), Positives = 477/600 (79%), Gaps = 15/600 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAAGMLDLAPQSVPTMEKE-FLTIGTDVRTLFTPSSAM 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L NPI + ++SGK FYAI+HRIDVG+VID EP+ D ++ AGA++
Sbjct: 61 SLEKAAAAQEISLTNPISMQSRSSGKAFYAIVHRIDVGMVIDFEPLG--DAALSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP+G+I +LCD +V +V +LTGYDRVMVY+FHEDEHGEV+AE RR
Sbjct: 119 SQKLAVRAISRLQALPAGDIGMLCDSVVQDVRELTGYDRVMVYRFHEDEHGEVMAEMRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL ++N+VRMICDC + PV+V+Q +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFIQNRVRMICDCCSAPVRVLQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVVN-----------ANTKLWGLVVCHHTSPRTVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
ACEFL+Q FG+Q+N E++L+AQ EK IL+TQT+LCDMLLRD+P+GIVTQTP++MDLV+
Sbjct: 288 CACEFLMQAFGLQLNMELQLAAQATEKRILKTQTLLCDMLLRDAPIGIVTQTPSIMDLVR 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAAL Y G +W LGV P E QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALCYGGTVWALGVAPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRS TAKEIKWGGAKH +D R+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSQTAKEIKWGGAKHHPDDRDDARRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
S PWE+ EMDAIHSLQLILRG +D ++K +V+ D R+ ++EL + +EMVRL
Sbjct: 468 SFPWENAEMDAIHSLQLILRGCFEDIDDTETKTMVHSRLNDLRVHSMEELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A G +LV DLV DS++ V+ +L +A
Sbjct: 528 IETATAPILAVDSRGLVNGWNAKIAELTGLPVGEATGKSLVGDLVYEDSMETVERLLRNA 587
>gi|73760088|dbj|BAE20162.1| phytochrome [Mougeotia scalaris]
gi|73760098|dbj|BAE20167.1| phytochrome [Mougeotia scalaris]
Length = 1124
Score = 813 bits (2101), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/658 (60%), Positives = 502/658 (76%), Gaps = 10/658 (1%)
Query: 28 QTSIDAKLAEDFD------ESDFDYSTSVNIS-SSTSNVPSSTVSAYLQRVQRGRLIQPF 80
Q S DAKL+ F+ FDY+ SV S + T + + +V+AYLQR+QRG +IQ F
Sbjct: 25 QASADAKLSTAFEVSSSSGGDSFDYTKSVTASLNPTEPLAAKSVTAYLQRMQRGSIIQSF 84
Query: 81 GCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQK 140
GCM+AV+ F ++ YSEN EML + P +VP +QQ+A+ +G DVR+L + S + ++K
Sbjct: 85 GCMMAVEPGTFRIIAYSENVSEMLGVTPQSVPTGDQQNAIGIGTDVRSLLSPSSVSVVEK 144
Query: 141 AANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDV-PVTAAGALKSYK 199
A +V+++NPI ++ + KPF+AILH DVGLVIDLEP++ + +AGA++S+K
Sbjct: 145 AVAANDVSMMNPITVYSLATQKPFFAILHMNDVGLVIDLEPISSSSDSAMFSAGAVQSHK 204
Query: 200 LAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLE 259
LAAKAISRLQSLP G+I LCDV+V EV +LTGYDRVM YKFH+DEHGEVVAE RR DLE
Sbjct: 205 LAAKAISRLQSLPGGDICGLCDVVVEEVRELTGYDRVMAYKFHDDEHGEVVAEIRRSDLE 264
Query: 260 PYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHG 319
PYLG HYPATDIPQASRFL +KN++RMICDC +P VKV+QD ++ Q +SL GST+R HG
Sbjct: 265 PYLGLHYPATDIPQASRFLFIKNRIRMICDCTSPQVKVVQDSRIPQEMSLAGSTMRGVHG 324
Query: 320 CHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYAC 379
CH +YM NMGS ASLVMSVTIN+ + +GRKLWGL+VCHH++PR +PFP+R AC
Sbjct: 325 CHTQYMMNMGSTASLVMSVTINDTNEIAGGPGMKGRKLWGLIVCHHSTPRHIPFPIRSAC 384
Query: 380 EFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDG 439
EFL+QVFG+Q+N EVEL+AQ REKHILRTQT+LCDMLLRD+P+GIV+Q+PNVMDLVKCDG
Sbjct: 385 EFLMQVFGLQLNMEVELAAQHREKHILRTQTLLCDMLLRDAPMGIVSQSPNVMDLVKCDG 444
Query: 440 AALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCG 499
AAL + G+ WLLG++PT+EQ+KDIA WL+ H +TGLSTDSLV+AGYP A LG VCG
Sbjct: 445 AALLFGGRCWLLGISPTQEQVKDIATWLISSHTDTTGLSTDSLVDAGYPKARELGVDVCG 504
Query: 500 IAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLP 559
+AA +IT DFLFWFR H KE+KW GAK D G ++ G +MHPRSSFKAFLEVVKQRSLP
Sbjct: 505 MAAARITENDFLFWFRGHAQKEVKWAGAK-DGGSEEDGSRMHPRSSFKAFLEVVKQRSLP 563
Query: 560 WEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIET 619
WEDVEMDAIHSLQLILRGS QD ++ + IV+ + ++ ++EL + +EMVRLIET
Sbjct: 564 WEDVEMDAIHSLQLILRGSFQDIEDKEDRKIVHARLKEMHLQGMEELSSVASEMVRLIET 623
Query: 620 AAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
A PILAVD +G VNGWN K +ELTGL++ + +G +LV DL S D V+ +L A
Sbjct: 624 ATAPILAVDTAGCVNGWNFKISELTGLSIPEVMGKSLVKDLTHPSSKDTVEKLLYMAL 681
>gi|13383444|gb|AAK20985.1| phytochrome C [Sarcandra glabra]
Length = 465
Score = 813 bits (2101), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/465 (83%), Positives = 418/465 (89%), Gaps = 5/465 (1%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HRIDVG VIDLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL
Sbjct: 1 SGKPFYAIMHRIDVGPVIDLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
CDVLV EVS+L GYDRVM YKFHEDEHGEV+AECRR DLEPYLG HYPATDIPQASRFL
Sbjct: 61 CDVLVREVSELMGYDRVMAYKFHEDEHGEVIAECRRSDLEPYLGLHYPATDIPQASRFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDC A PVKVIQDK+L QP+SLCGS LRAPHGCHA+YM NMGSIASLVMSVT
Sbjct: 121 MKNKVRMICDCSAAPVKVIQDKRLGQPMSLCGSALRAPHGCHAQYMANMGSIASLVMSVT 180
Query: 340 INEAEDELDND----QEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVE 395
INE +DE ++D QE+ RKLWGLVVCHHT PRFVPFPLRYACEFLIQVFG+Q+NKEVE
Sbjct: 181 INEDDDETESDPQQQQEKPRKLWGLVVCHHTGPRFVPFPLRYACEFLIQVFGIQLNKEVE 240
Query: 396 LSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTP 455
L+AQLREKH+L+TQTVLCDMLLRD+P+ IVTQ+PNVMDLVKCDGAALYYR + WLLG TP
Sbjct: 241 LAAQLREKHMLKTQTVLCDMLLRDAPMRIVTQSPNVMDLVKCDGAALYYRNQFWLLGTTP 300
Query: 456 TEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFR 515
TE QI+DIAEWLL+YH GSTGLSTDSL+EAGYPGA LGDAVCG+AAVKITSKDFLFWFR
Sbjct: 301 TEAQIRDIAEWLLDYHDGSTGLSTDSLMEAGYPGASVLGDAVCGMAAVKITSKDFLFWFR 360
Query: 516 SHTAKEIKWGGAKHDSGGK-DGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLI 574
SH+AKEIKWGGAKHD K D GRKMHPRSSFKAFLEV+KQRSL WEDVEMDAIHSLQLI
Sbjct: 361 SHSAKEIKWGGAKHDPINKDDDGRKMHPRSSFKAFLEVMKQRSLRWEDVEMDAIHSLQLI 420
Query: 575 LRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIET 619
LRGSLQ+E DSK IVN +I+ +DELR +TNEMVRLIET
Sbjct: 421 LRGSLQEESENDSKAIVNASLDVAKIQGMDELRFVTNEMVRLIET 465
>gi|363547645|gb|AEW26865.1| phytochrome P [Ceratozamia mixeorum]
Length = 590
Score = 813 bits (2100), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/601 (64%), Positives = 476/601 (79%), Gaps = 15/601 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAAGMLDLAPQSVPTMEEE-FLTVGTDVRTLFTPSSAT 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L NPI + ++SGK FYAI+HRIDVG+VID EP+ D ++ AGA++
Sbjct: 61 SLEKAAAAQEISLANPISMQSRSSGKAFYAIVHRIDVGMVIDFEPLG--DAALSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP+G+I +LCD +V +V +LTGYDRVMVY+FHEDEHGEV+AE RR
Sbjct: 119 SQKLAVRAISRLQALPAGDIGMLCDSVVQDVRELTGYDRVMVYRFHEDEHGEVMAEMRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC + PV+V+Q +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRSAPVRVLQAAELKQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVVN-----------ANTKLWGLVVCHHTSPRAVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
ACEFL+Q FG+Q+N E++L+ Q EK IL+TQT+LCDMLLRD+P+GIVTQTP++MDLV+
Sbjct: 288 CACEFLMQAFGLQLNMELQLATQATEKRILKTQTLLCDMLLRDAPIGIVTQTPSIMDLVR 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAAL Y G +W LGV P E QIK IA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALCYGGTVWALGVAPAEAQIKGIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRS TAKEIKWGGAKH +D GR+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSQTAKEIKWGGAKHHPDDRDDGRRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
S PWE+ EMDAIHSLQLIL GS D ++K +V+ D R++ ++EL + +EMVRL
Sbjct: 468 SFPWENAEMDAIHSLQLILHGSFGDIDDTETKTMVHSRLNDLRVQSMEELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A G +LV DLV DS++ V+ +L +A
Sbjct: 528 IETATAPILAVDSRGLVNGWNAKIAELTGLPVGEATGKSLVGDLVYEDSMETVERLLRNA 587
Query: 676 F 676
Sbjct: 588 L 588
>gi|363547637|gb|AEW26861.1| phytochrome P [Ceratozamia mexicana]
Length = 590
Score = 812 bits (2097), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/600 (64%), Positives = 477/600 (79%), Gaps = 15/600 (2%)
Query: 77 IQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
IQPFGCM+AV+E+ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A
Sbjct: 2 IQPFGCMLAVEERTFRIIAYSENAAGMLDLAPQSVPTMEKE-FLTIGTDVRTLFTPSSAM 60
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
+L+KAA E++L NPI + ++SGK FYAI+HRIDVG+VID EP+ D ++ AGA++
Sbjct: 61 SLEKAAAAQEISLANPISMQSRSSGKAFYAIVHRIDVGMVIDFEPLG--DAALSVAGAVQ 118
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S KLA +AISRLQ+LP+G+I +LCD +V +V +LTGYDRVMVY+FHEDEHGEV+AE RR
Sbjct: 119 SQKLAVRAISRLQALPAGDIGMLCDSVVQDVRELTGYDRVMVYRFHEDEHGEVMAEMRRS 178
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL ++N+VRMICDC + PV+V+Q +L QPL L GSTLRA
Sbjct: 179 DLEPYLGLHYPATDIPQASRFLFIQNRVRMICDCRSAPVRVLQAAELRQPLCLVGSTLRA 238
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+V +N KLWGLVVCHHTSPR VPFP+R
Sbjct: 239 PHGCHAQYMANMGSIASLVMAVVVN-----------ANTKLWGLVVCHHTSPRTVPFPVR 287
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
ACEFL+Q FG+Q+N E++L+AQ EK IL+T T+LCDMLLRD+P+GIVTQTP++MDLV+
Sbjct: 288 CACEFLMQAFGLQLNMELQLAAQATEKRILKTLTLLCDMLLRDAPIGIVTQTPSIMDLVR 347
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAAL Y G +W LGV P E QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDA
Sbjct: 348 CDGAALCYGGTVWALGVAPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDA 407
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +IT+KDFLFWFRS TAKEIKWGG KH +D R+MHPRSSFKAFLEVVK+R
Sbjct: 408 VCGMAAARITAKDFLFWFRSQTAKEIKWGGEKHHPDDRDDARRMHPRSSFKAFLEVVKRR 467
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
S PWE+ EMDAIHSLQLILRGS +D ++K +V+ D R++ ++EL + +EMVRL
Sbjct: 468 SFPWENAEMDAIHSLQLILRGSFEDIDDTETKTMVHSRLNDLRVQSMEELSSVASEMVRL 527
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD+ G VNGWN+K AELTGL V +A G +LV DLV DS++ V+ +L +A
Sbjct: 528 IETATAPILAVDSRGLVNGWNAKIAELTGLPVGEATGKSLVGDLVYEDSMETVERLLRNA 587
>gi|1730566|sp|P55004.1|PHYE_IPONI RecName: Full=Phytochrome E
gi|1145714|gb|AAA84970.1| phytochrome E [Ipomoea nil]
Length = 1115
Score = 811 bits (2096), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/680 (60%), Positives = 500/680 (73%), Gaps = 29/680 (4%)
Query: 10 NYSR----SSSARSKQN-ARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNV 59
NY + SSSA S N + AQ + DAKL +F++S FDYS SV + NV
Sbjct: 3 NYGKAVTFSSSATSNLNTGKAIAQYNADAKLMAEFEQSRESGKSFDYSRSV--IHAPQNV 60
Query: 60 PSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDA 119
++AYL R+QRG LIQPFGCM+A++E +F ++G+SEN ++L L +E +
Sbjct: 61 TEEEMTAYLSRIQRGGLIQPFGCMLAIEEPSFKIVGFSENCFDLLGLKS----GVEPPER 116
Query: 120 LTL-GIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVID 178
++L GID RTLFT S A+L KA E++LLNPI +H K + KPFYA+LHRIDVG+VID
Sbjct: 117 MSLIGIDARTLFTLSSRASLAKAVASREISLLNPIWVHSKINQKPFYAVLHRIDVGIVID 176
Query: 179 LEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMV 238
LEP N D + AGA++S KLA +AISRLQSLP G+I LCD +V +V LTGYDRVMV
Sbjct: 177 LEPANSADPALLLAGAVQSQKLAVRAISRLQSLPGGDIGTLCDTVVEDVQKLTGYDRVMV 236
Query: 239 YKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVI 298
YKFH+D HGEVV+E RR DLEPYLG HYPATDIPQA+RFL +N+VRMICDC A PVKV+
Sbjct: 237 YKFHDDSHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNAQPVKVL 296
Query: 299 QDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLW 358
Q ++L QPL L STLR+PHGCH +YM NMGSIASLVM+V IN +E KLW
Sbjct: 297 QCEELKQPLCLVNSTLRSPHGCHTKYMANMGSIASLVMAVVINSSE---------SMKLW 347
Query: 359 GLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLR 418
GLVVCHHTSPR+VPFPLRYACEFL+Q F +Q+ E++L++QL EK IL+TQT+LCDMLLR
Sbjct: 348 GLVVCHHTSPRYVPFPLRYACEFLMQAFSLQLYMELQLASQLAEKKILQTQTLLCDMLLR 407
Query: 419 DSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLS 478
D+P GIVTQTP++MDLV+CDGAALYY GK WLLGVTPTE Q+KDIAEWLL H STGLS
Sbjct: 408 DAPFGIVTQTPSIMDLVRCDGAALYYNGKCWLLGVTPTETQVKDIAEWLLHNHGDSTGLS 467
Query: 479 TDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGR 538
TD L +AGYPGA LGDAV G+A +ITSKDFLFWFRSHTAKE+KWGGAKH KD G
Sbjct: 468 TDCLSDAGYPGAPLLGDAVSGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPEDKDDGG 527
Query: 539 KMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDD 598
+MHPRSSF AFLEVVK RSLPWED E++AIHSLQLI+R SLQ + E+ V+ P +D
Sbjct: 528 RMHPRSSFIAFLEVVKSRSLPWEDSEINAIHSLQLIMRDSLQG-IGENYMKSVSSPQQND 586
Query: 599 RIE-KIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV 657
+ EL + E+VRL+ETA VPI VD+SG +NGWN+K AELTGL + AIG L+
Sbjct: 587 SDGVRFYELSSMALELVRLVETATVPIFGVDSSGLINGWNAKIAELTGLQANVAIGKYLI 646
Query: 658 DLVAG-DSVDVVKNMLSSAF 676
D V DS + K ++ A
Sbjct: 647 DDVTHEDSHETFKALMCRAL 666
>gi|406685277|gb|AFS51079.1| phytochrome P, partial [Cephalotaxus sinensis]
Length = 604
Score = 811 bits (2094), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/605 (66%), Positives = 474/605 (78%), Gaps = 25/605 (4%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHA----------VPNIE 115
AYL R+QRG IQPFGCM+AV+E +F ++ YSENA EMLD+ PH+ VP +E
Sbjct: 1 AYLSRMQRGGSIQPFGCMLAVEETSFKIIAYSENALEMLDVMPHSHSHSHSHSHSVPTME 60
Query: 116 QQDA---LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRID 172
++ +T+G DVR LFT S L++AA E++L NPI + +SGKPFYAI+HRID
Sbjct: 61 GGESEGIVTIGSDVRRLFTPSSGRNLERAAMSQEISLANPIAMD-SSSGKPFYAIVHRID 119
Query: 173 VGLVIDLEPVNPDDVPVTAA--------GALKSYKLAAKAISRLQSLPSGNISLLCDVLV 224
VG+VIDLE V D + G + S +LA +A SRLQ++PSG+I LLCD +V
Sbjct: 120 VGIVIDLELVRRGDAAALVSWGGGGLGGGTVPSQRLAVRATSRLQAVPSGDIGLLCDTVV 179
Query: 225 NEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKV 284
EV +LTGYDRVMVYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+V
Sbjct: 180 EEVRELTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRV 239
Query: 285 RMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE 344
RMICDC A PVKVIQ ++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V +N
Sbjct: 240 RMICDCRATPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIVNGNG 299
Query: 345 DELDNDQEQGR---KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLR 401
++ D GR KLWGLVVCHHTSPR VPFPLR ACEFL+Q FG+Q+N E++L+AQL
Sbjct: 300 NDEDGVSGSGRSSMKLWGLVVCHHTSPRAVPFPLRSACEFLMQTFGLQINMELQLAAQLT 359
Query: 402 EKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIK 461
E +ILRTQT+LCDMLLRD+P+GIV+Q+P++MDLVKCDGAALYY G LWLLGVTP E QIK
Sbjct: 360 ENNILRTQTLLCDMLLRDAPIGIVSQSPSIMDLVKCDGAALYYGGMLWLLGVTPVEAQIK 419
Query: 462 DIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKE 521
DIA+WLLE H STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE
Sbjct: 420 DIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKE 479
Query: 522 IKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD 581
+KWGGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS +
Sbjct: 480 MKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFEG 539
Query: 582 EVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAA 641
D+K +V+ D +++ IDEL + +EMVRLIETA PILAVD++G VNGWN+K
Sbjct: 540 IDDSDTKTMVHARLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSTGIVNGWNAKVG 599
Query: 642 ELTGL 646
ELTGL
Sbjct: 600 ELTGL 604
>gi|406685599|gb|AFS51240.1| phytochrome P, partial [Podocarpus salignus]
Length = 600
Score = 810 bits (2093), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/567 (69%), Positives = 457/567 (80%), Gaps = 14/567 (2%)
Query: 118 DALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVI 177
+ LT+G DVRTLFT S A AL+KAA +++L+NPI +H + SGKP AI+HRIDVG+VI
Sbjct: 11 EVLTIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSQYSGKPINAIVHRIDVGMVI 70
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEP D ++ AGA++S K A +AISRLQSLP+G+I LLCD +V +V +LTGYDRVM
Sbjct: 71 DLEPRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVM 130
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV V
Sbjct: 131 VYKFHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVNV 190
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG--- 354
IQ ++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 191 IQSEELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTS 244
Query: 355 ----RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQT 410
KLWGLVVCHHTSPR V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT
Sbjct: 245 GRSSMKLWGLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQT 304
Query: 411 VLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEY 470
+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIAEWLLEY
Sbjct: 305 LLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEY 364
Query: 471 HRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHD 530
H STGLSTDSL +AGYPGA LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 365 HGDSTGLSTDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHH 424
Query: 531 SGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMI 590
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +
Sbjct: 425 PDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTM 484
Query: 591 VNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQ 650
V+ D +++ IDEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +
Sbjct: 485 VHARLTDLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGE 544
Query: 651 AIGTALV-DLVAGDSVDVVKNMLSSAF 676
A+G +LV D+V + + V+ ML A
Sbjct: 545 AMGKSLVHDVVLEECAECVEKMLYRAL 571
>gi|406685597|gb|AFS51239.1| phytochrome P, partial [Podocarpus rumphii]
Length = 600
Score = 810 bits (2093), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/567 (68%), Positives = 457/567 (80%), Gaps = 14/567 (2%)
Query: 118 DALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVI 177
+ LT+G DVRTLFT S A AL+KAA +++L+NPI +H SGKPF AI+HRIDVG+VI
Sbjct: 11 EVLTIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSHYSGKPFNAIVHRIDVGMVI 70
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEP + ++ AGA++S K A +AISRLQSLP+G+I LLCD +V +V +LTGYDRVM
Sbjct: 71 DLEPRRTGEAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVM 130
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKV
Sbjct: 131 VYKFHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKV 190
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG--- 354
IQ ++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 191 IQSEELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTS 244
Query: 355 ----RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQT 410
KLWGLVVCHHTS R V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT
Sbjct: 245 GRSSMKLWGLVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQT 304
Query: 411 VLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEY 470
+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIAEWLLEY
Sbjct: 305 LLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEY 364
Query: 471 HRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHD 530
H STGLSTDSL +AGYPGA LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 365 HGDSTGLSTDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHH 424
Query: 531 SGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMI 590
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +
Sbjct: 425 PDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTM 484
Query: 591 VNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQ 650
+ D +++ IDEL + +EMVRLIETA PILA+D++G VNGWN+K AELTGL V +
Sbjct: 485 AHARLTDLKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGE 544
Query: 651 AIGTALV-DLVAGDSVDVVKNMLSSAF 676
A+G +LV D+V +S + V+ ML A
Sbjct: 545 AMGKSLVHDVVLEESAECVEKMLYRAL 571
>gi|356555999|ref|XP_003546315.1| PREDICTED: phytochrome B-like isoform 2 [Glycine max]
Length = 867
Score = 809 bits (2090), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/597 (64%), Positives = 469/597 (78%), Gaps = 4/597 (0%)
Query: 83 MIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD--ALTLGIDVRTLFTSSGAAALQK 140
MIAVDE +F +L YS+NA +ML + P +VP+++ ++ A LG D+RTLFT S A L+K
Sbjct: 1 MIAVDEPSFRILAYSDNARDMLGITPQSVPSLDDKNDAAFALGTDIRTLFTHSSAVLLEK 60
Query: 141 AANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKL 200
A + E++L+NPI IH +TSGKPFY ILHRIDVG+VIDLEP +D ++ AGA++S KL
Sbjct: 61 AFSAREISLMNPIWIHSRTSGKPFYGILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKL 120
Query: 201 AAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEP 260
A +AIS+LQSLP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE +RPDLEP
Sbjct: 121 AVRAISQLQSLPGGDVKLLCDTVVESVRELTGYDRVMVYRFHEDEHGEVVAETKRPDLEP 180
Query: 261 YLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGC 320
Y+G HYPATDIPQASRFL +N+VRMI DC A V+V+QD+ L QPL L GSTLRAPHGC
Sbjct: 181 YIGLHYPATDIPQASRFLFKQNRVRMIVDCHASAVRVVQDEALVQPLCLVGSTLRAPHGC 240
Query: 321 HARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACE 380
HA+YM NMGS ASLVM+V IN DE +LWGLVVCHHTS R +PFPLRYACE
Sbjct: 241 HAQYMANMGSTASLVMAVIIN-GNDEEGVGGRTSMRLWGLVVCHHTSARCIPFPLRYACE 299
Query: 381 FLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGA 440
FL+Q FG+Q+N E++L+AQ EK +LRTQT+LCDMLLRDSP GIVTQ+P++MDLVKCDGA
Sbjct: 300 FLMQAFGLQLNMELQLAAQSLEKRVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGA 359
Query: 441 ALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGI 500
ALYY+G + LGVTPTE QI+DI EWLL +HR STGLSTDSL +AGYPGA +LGDAVCG+
Sbjct: 360 ALYYQGNYYPLGVTPTEAQIRDIIEWLLAFHRDSTGLSTDSLADAGYPGAASLGDAVCGM 419
Query: 501 AAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPW 560
A IT KDFLFWFRSHTAKEIKWGGAKH KD G++MHPRSSFKAFLEVVK RSLPW
Sbjct: 420 AVAYITEKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW 479
Query: 561 EDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETA 620
E+ EMDAIHSLQLILR S +D +SK +++ + ++ +DEL + EMVRLIETA
Sbjct: 480 ENAEMDAIHSLQLILRDSFKDAEHSNSKAVLDPRMSELELQGVDELSSVAREMVRLIETA 539
Query: 621 AVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
PI AVD G +NGWN+K +ELTGL V++A+G +LV DLV +S + V +LS A
Sbjct: 540 TAPIFAVDVDGRINGWNAKVSELTGLPVEEAMGKSLVRDLVFKESEETVDKLLSRAL 596
>gi|190586169|gb|ACE79201.1| phytochrome B-4 [Glycine max]
Length = 867
Score = 808 bits (2087), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/597 (64%), Positives = 468/597 (78%), Gaps = 4/597 (0%)
Query: 83 MIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQD--ALTLGIDVRTLFTSSGAAALQK 140
MIAVDE +F +L YS+NA +ML + P +VP+++ ++ A LG D+RTLFT S A L+K
Sbjct: 1 MIAVDEPSFRILAYSDNARDMLGITPQSVPSLDDKNDAAFALGTDIRTLFTHSSAVLLEK 60
Query: 141 AANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKL 200
A + E++L+NPI IH +TSGKPFY ILHRIDVG+VIDLEP +D ++ AGA++S KL
Sbjct: 61 AFSAREISLMNPIWIHSRTSGKPFYGILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKL 120
Query: 201 AAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEP 260
A +AIS+LQSLP G++ LLCD +V V +LTGYDRVMVY+FHEDEHGEVVAE +RPDLEP
Sbjct: 121 AVRAISQLQSLPGGDVKLLCDTVVESVRELTGYDRVMVYRFHEDEHGEVVAETKRPDLEP 180
Query: 261 YLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGC 320
Y+G HYPATDIPQASRFL +N+VRMI DC A V+V+QD+ L QPL L GSTLRAPHGC
Sbjct: 181 YIGLHYPATDIPQASRFLFKQNRVRMIVDCHASAVRVVQDEALVQPLCLVGSTLRAPHGC 240
Query: 321 HARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACE 380
HA+YM NMGS ASLVM+V IN DE +LWGLV+CHHTS R +PFPLRYACE
Sbjct: 241 HAQYMANMGSTASLVMAVIIN-GNDEEGVGGRTSMRLWGLVICHHTSARCIPFPLRYACE 299
Query: 381 FLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGA 440
FL+Q FG+Q+N E++L+AQ EK +LRTQT+LCDMLLRDSP GIVTQ+P++MDLVKCDGA
Sbjct: 300 FLMQAFGLQLNMELQLAAQSLEKRVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGA 359
Query: 441 ALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGI 500
ALYY+G + LGVTPTE QI+DI EWLL +HR STGLSTDSL +AGYPGA +LGDAVCG+
Sbjct: 360 ALYYQGNYYPLGVTPTEAQIRDIIEWLLAFHRDSTGLSTDSLADAGYPGAASLGDAVCGM 419
Query: 501 AAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPW 560
A IT KDFLFWFRSHTAKEIKWGGAKH KD G++MHPRSSFKAFLEVVK RSLPW
Sbjct: 420 AVAYITEKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPW 479
Query: 561 EDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETA 620
E EMDAIHSLQLILR S +D +SK +++ + ++ +DEL + EMVRLIETA
Sbjct: 480 ESAEMDAIHSLQLILRDSFKDAEHSNSKAVLDPRMSELELQGVDELSSVAREMVRLIETA 539
Query: 621 AVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
PI AVD G +NGWN+K +ELTGL V++A+G +LV DLV +S + V +LS A
Sbjct: 540 TAPIFAVDVDGRINGWNAKVSELTGLPVEEAMGKSLVRDLVFKESEETVDKLLSRAL 596
>gi|406685271|gb|AFS51076.1| phytochrome P, partial [Cephalotaxus fortunei]
Length = 604
Score = 808 bits (2087), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/605 (65%), Positives = 472/605 (78%), Gaps = 25/605 (4%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHA----------VPNIE 115
AYL R+QRG IQPFGCM+AV+E +F ++ YSENA EMLD+ PH+ VP +E
Sbjct: 1 AYLSRMQRGGSIQPFGCMLAVEETSFKIIAYSENALEMLDVMPHSHSHSHSHSHSVPTME 60
Query: 116 QQDA---LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRID 172
++ +T+G DVR LFT S L++AA E++L NPI + SGKPFYAI+HRID
Sbjct: 61 GGESEGIVTIGSDVRRLFTPSSGRNLERAAMSQEISLANPIAMD-SNSGKPFYAIVHRID 119
Query: 173 VGLVIDLEPVNPDDVPVTAA--------GALKSYKLAAKAISRLQSLPSGNISLLCDVLV 224
VG+VIDLE V D + G + S +LA +A SRLQ++PSG+I LLCD +V
Sbjct: 120 VGIVIDLELVRRGDAAALVSWGGGGLGGGTVPSQRLAVRATSRLQAVPSGDIGLLCDTVV 179
Query: 225 NEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKV 284
EV +LTGYDRVMVYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+V
Sbjct: 180 EEVRELTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRV 239
Query: 285 RMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE 344
RMICDC A PVKVIQ ++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V +N
Sbjct: 240 RMICDCRATPVKVIQAEELKQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIVNGNG 299
Query: 345 DELDNDQEQGR---KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLR 401
++ D GR KLWGLVVCHHTSPR VPFPLR ACEFL+Q FG+Q+N E++L+AQL
Sbjct: 300 NDEDGVSGSGRSSMKLWGLVVCHHTSPRAVPFPLRSACEFLMQTFGLQINMELQLAAQLT 359
Query: 402 EKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIK 461
E +ILRTQT+LCDMLLRD+P+GIV+Q+P++MDLVKCDGAALYY G WLLGVTP E QIK
Sbjct: 360 ENNILRTQTLLCDMLLRDAPIGIVSQSPSIMDLVKCDGAALYYGGMFWLLGVTPVEAQIK 419
Query: 462 DIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKE 521
DIA+WLLE H STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE
Sbjct: 420 DIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKE 479
Query: 522 IKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD 581
+KWGGAKH KD GR+MHPRSSFKAFLEVVK+RSLPW +VEMDAIHSLQLILRGS +D
Sbjct: 480 MKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWGNVEMDAIHSLQLILRGSFED 539
Query: 582 EVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAA 641
D+K +V+ D +++ IDEL + +EMVRLIETA PILAVD++G VNGWN+K
Sbjct: 540 IDDSDTKTMVHARLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSTGIVNGWNAKVG 599
Query: 642 ELTGL 646
ELTGL
Sbjct: 600 ELTGL 604
>gi|406685581|gb|AFS51231.1| phytochrome P, partial [Podocarpus matudae]
Length = 600
Score = 808 bits (2086), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/567 (68%), Positives = 457/567 (80%), Gaps = 14/567 (2%)
Query: 118 DALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVI 177
+ LT+G DVRTLFT S A AL+KAA +++L+NPI +H + SGKPF AI+HRIDVG+V+
Sbjct: 11 ETLTIGTDVRTLFTPSSARALEKAAMAPDISLMNPIWVHSQYSGKPFNAIVHRIDVGMVV 70
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEP D ++ AGA++S K A +AISRLQSLP+G+I LLCD +V +V +LTGYDRVM
Sbjct: 71 DLEPRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVM 130
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV V
Sbjct: 131 VYKFHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVNV 190
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG--- 354
IQ ++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 191 IQSEELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTS 244
Query: 355 ----RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQT 410
KLWGLVVCHHTSPR V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT
Sbjct: 245 GRSSMKLWGLVVCHHTSPRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQT 304
Query: 411 VLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEY 470
+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G LGVTPTE QIKDIAEWLLEY
Sbjct: 305 LLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTGCLGVTPTEAQIKDIAEWLLEY 364
Query: 471 HRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHD 530
H STGLSTDSL +AGYPGA LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 365 HGDSTGLSTDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHH 424
Query: 531 SGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMI 590
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +
Sbjct: 425 PDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSRTKTM 484
Query: 591 VNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQ 650
V+ D +++ IDEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +
Sbjct: 485 VHARLTDLKLQGIDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGE 544
Query: 651 AIGTALV-DLVAGDSVDVVKNMLSSAF 676
A+G +LV D+V + + V+ ML A
Sbjct: 545 AMGKSLVHDVVLEECAECVEKMLYRAL 571
>gi|406685607|gb|AFS51244.1| phytochrome P, partial [Podocarpus sylvestris]
Length = 600
Score = 807 bits (2085), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/567 (68%), Positives = 457/567 (80%), Gaps = 14/567 (2%)
Query: 118 DALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVI 177
+ LT+G DVRTLFT S A AL+KAA +++L+NP+ +H SGKPF AI+HRIDVG+VI
Sbjct: 11 EVLTIGTDVRTLFTPSSARALEKAAMAPDISLMNPVWVHSHYSGKPFNAIVHRIDVGMVI 70
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEP D ++ AGA++S K A +AISRLQSLP+G+I LLCD +V +V +LTGYDRVM
Sbjct: 71 DLEPRRTGDAAMSTAGAVQSQKFAVRAISRLQSLPTGDIGLLCDTVVEDVRELTGYDRVM 130
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKV
Sbjct: 131 VYKFHEDEHGEVVAEIRRADLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCSATPVKV 190
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG--- 354
IQ ++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 191 IQSEELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTS 244
Query: 355 ----RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQT 410
KL GLVVCHHTS R V FPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT
Sbjct: 245 GRSSMKLRGLVVCHHTSSRAVSFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQT 304
Query: 411 VLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEY 470
+LCDMLLRD+P+GIVTQ+P++MDLVKCDGAALYY G W LGVTPTE QIKDIAEWLLEY
Sbjct: 305 LLCDMLLRDAPIGIVTQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEAQIKDIAEWLLEY 364
Query: 471 HRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHD 530
H STGLSTDSL +AGYPGA LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 365 HGDSTGLSTDSLADAGYPGAATLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHH 424
Query: 531 SGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMI 590
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD +K +
Sbjct: 425 PDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSGTKTM 484
Query: 591 VNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQ 650
V+ D +++ IDEL + +EMVRLIETA PILA+D++G VNGWN+K AELTGL V +
Sbjct: 485 VHARLTDLKLQGIDELSSVASEMVRLIETATAPILAIDSNGLVNGWNAKVAELTGLPVGE 544
Query: 651 AIGTALV-DLVAGDSVDVVKNMLSSAF 676
A+G +LV D+V +S + V+ ML A
Sbjct: 545 AMGKSLVHDVVLEESAECVEKMLYRAL 571
>gi|2507185|sp|P33529.2|PHY_MOUSC RecName: Full=Phytochrome
gi|1419681|emb|CAA64796.1| phytochrome [Mougeotia scalaris]
Length = 1124
Score = 807 bits (2085), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/658 (59%), Positives = 500/658 (75%), Gaps = 10/658 (1%)
Query: 28 QTSIDAKLAEDFD------ESDFDYSTSVNIS-SSTSNVPSSTVSAYLQRVQRGRLIQPF 80
Q S DAKL+ F+ FDY+ SV S + T + + +V+AYLQR+QRG +IQ F
Sbjct: 25 QASADAKLSTAFEVSSSSGGDSFDYTKSVTASLNPTEPLAAKSVTAYLQRMQRGSIIQSF 84
Query: 81 GCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQK 140
GCM+AV+ F ++ YSEN EML + P +VP + Q+A+ +G DVR+L + S + ++K
Sbjct: 85 GCMMAVEPGTFRIIAYSENVSEMLGVTPQSVPTGDHQNAIGIGTDVRSLLSPSSVSVVEK 144
Query: 141 AANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDV-PVTAAGALKSYK 199
A +V+++NPI ++ + K F+AILH DVGLVIDLEP++ + +AGA++S+K
Sbjct: 145 AVAANDVSMMNPIAVYSLATQKLFFAILHMNDVGLVIDLEPISSSSDSAMFSAGAVQSHK 204
Query: 200 LAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLE 259
LAAKAISRLQSLP G+I LCDV+V EV +LTGYDRVM YKFH+DEHGEVVAE RR DLE
Sbjct: 205 LAAKAISRLQSLPGGDICGLCDVVVEEVRELTGYDRVMAYKFHDDEHGEVVAEIRRSDLE 264
Query: 260 PYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHG 319
PYLG HYPATDIPQASRFL +KN++RMICDC +P VKV+QD ++ Q +SL GST+R HG
Sbjct: 265 PYLGLHYPATDIPQASRFLFIKNRIRMICDCTSPQVKVVQDSRIPQEMSLAGSTMRGVHG 324
Query: 320 CHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYAC 379
CH +YM NMGS ASLVMSVTIN+ + +GRKLWGL+VCHH++PR +PFP+R AC
Sbjct: 325 CHTQYMMNMGSTASLVMSVTINDTNEIAGGPGMKGRKLWGLIVCHHSTPRHIPFPIRSAC 384
Query: 380 EFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDG 439
EFL+QVFG+Q+N EVEL+AQ REKHILRTQT+LCDMLLRD+P+GIV+Q+PNVMDLVKCDG
Sbjct: 385 EFLMQVFGLQLNMEVELAAQHREKHILRTQTLLCDMLLRDAPMGIVSQSPNVMDLVKCDG 444
Query: 440 AALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCG 499
AAL + G+ WLLG++PT+EQ+KDIA WL+ H +TGLSTDSLV+AGYP A LG VCG
Sbjct: 445 AALLFGGRCWLLGISPTQEQVKDIATWLISSHTDTTGLSTDSLVDAGYPKARELGVDVCG 504
Query: 500 IAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLP 559
+AA +IT DFLFWFR H KE+KW GAK D G ++ G +MHPRSSFKAFLEVVKQRSLP
Sbjct: 505 MAAARITENDFLFWFRGHAQKEVKWAGAK-DGGSEEDGSRMHPRSSFKAFLEVVKQRSLP 563
Query: 560 WEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIET 619
WEDVEMDAIHSLQLILRGS QD ++ + IV+ + ++ ++EL + +EMVRLIET
Sbjct: 564 WEDVEMDAIHSLQLILRGSFQDIEDKEDRKIVHARLKEMHLQGMEELSSVASEMVRLIET 623
Query: 620 AAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
A PILAVD +G VNGWN K +ELTGL++ + +G +LV DL S D V+ +L A
Sbjct: 624 ATAPILAVDTAGCVNGWNFKISELTGLSIPEVMGKSLVKDLTHPSSKDTVEKLLYMAL 681
>gi|406685273|gb|AFS51077.1| phytochrome P, partial [Cephalotaxus harringtonia]
Length = 604
Score = 806 bits (2082), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/605 (65%), Positives = 470/605 (77%), Gaps = 25/605 (4%)
Query: 66 AYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHA----------VPNIE 115
AYL R+QRG IQPFGCM+AV+E +F ++ YSENA EMLD+ PH+ VP +E
Sbjct: 1 AYLSRMQRGGSIQPFGCMLAVEETSFKIIAYSENALEMLDVMPHSHSHSHSHSHSVPTME 60
Query: 116 QQDA---LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRID 172
++ +T+G DVR LFT S L++AA E++L NPI + SGKPFYAI+HRID
Sbjct: 61 GGESEGIVTIGSDVRRLFTPSSGRNLERAAMSQEISLANPIAMD-SNSGKPFYAIVHRID 119
Query: 173 VGLVIDLEPVNPDDVPVTAA--------GALKSYKLAAKAISRLQSLPSGNISLLCDVLV 224
VG+VIDLE V + + G + S +LA +A SRLQ++PSG+I LLCD +V
Sbjct: 120 VGIVIDLELVRRGNAAALVSWGGGGLGGGTVPSQRLAVRATSRLQAVPSGDIGLLCDTVV 179
Query: 225 NEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKV 284
EV +LTGYDRVMVYKFHEDEHGEVVAE RR DLEPYLG HYPATDIPQASRFL M+++V
Sbjct: 180 EEVRELTGYDRVMVYKFHEDEHGEVVAEIRRSDLEPYLGLHYPATDIPQASRFLFMQDRV 239
Query: 285 RMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTIN--- 341
RMICDC A PVKVIQ ++L QPL L GSTLRAPHGCHA YM NMGSIASLVM+V +N
Sbjct: 240 RMICDCRATPVKVIQAEELKQPLCLVGSTLRAPHGCHAXYMANMGSIASLVMAVIVNGNG 299
Query: 342 EAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLR 401
ED + KLWGLVVCHHTSPR VPFPLR ACEFL+Q FG+Q+N E++L+AQL
Sbjct: 300 NGEDGVSGSGRSSMKLWGLVVCHHTSPRAVPFPLRSACEFLMQTFGLQINMELQLAAQLT 359
Query: 402 EKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIK 461
E +ILRTQT+LCDMLLRD+P+GIV+Q+P++MDLVKCDGAALYY G WLLGVTP E QIK
Sbjct: 360 ENNILRTQTLLCDMLLRDAPIGIVSQSPSIMDLVKCDGAALYYGGMFWLLGVTPVEAQIK 419
Query: 462 DIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKE 521
DIA+WLLE H STGLSTDSL +AGYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE
Sbjct: 420 DIADWLLECHGDSTGLSTDSLADAGYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKE 479
Query: 522 IKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD 581
+KWGGAKH KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS +D
Sbjct: 480 MKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFED 539
Query: 582 EVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAA 641
D+K +V+ D +++ IDEL + +EMVRLIETA PILAVD++G VNGWN+K
Sbjct: 540 IDDSDTKTMVHARLNDLKLQGIDELSSVASEMVRLIETATAPILAVDSTGIVNGWNAKVG 599
Query: 642 ELTGL 646
ELTGL
Sbjct: 600 ELTGL 604
>gi|39598884|gb|AAR28986.1| phytochrome C [Euptelea polyandra]
Length = 460
Score = 806 bits (2082), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/459 (82%), Positives = 416/459 (90%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HRIDVGLVIDLEPV+P +VPV AAG LKSYKL+AKAISRLQSLPSGNISLL
Sbjct: 1 SGKPFYAIIHRIDVGLVIDLEPVSPAEVPVAAAGILKSYKLSAKAISRLQSLPSGNISLL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
CDVLV EVSDLTGYDRVMVYKFHEDEHGEVVAEC R +LEPYLGFHYPATDIPQASRFL
Sbjct: 61 CDVLVQEVSDLTGYDRVMVYKFHEDEHGEVVAECLRSNLEPYLGFHYPATDIPQASRFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
M+NKVRMICDC A PVKVIQDK L QPLSLCGSTLRAPHGCHA+YM NMGSIASLVMSVT
Sbjct: 121 MRNKVRMICDCSARPVKVIQDKSLAQPLSLCGSTLRAPHGCHAQYMANMGSIASLVMSVT 180
Query: 340 INEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQ 399
I+E +DE+ DQ++GR LWGLVVCHHTSPRFVP+PLR+ACEFLIQVFG+Q+NKEVEL+ Q
Sbjct: 181 IDENDDEIQTDQQKGRVLWGLVVCHHTSPRFVPYPLRHACEFLIQVFGIQLNKEVELATQ 240
Query: 400 LREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQ 459
LREKHIL+TQTVLCDMLLRD+PVGIVTQ+PNVMDLV+CDGAALYY+ + WLLG+TPTE Q
Sbjct: 241 LREKHILQTQTVLCDMLLRDAPVGIVTQSPNVMDLVRCDGAALYYKNQFWLLGLTPTEAQ 300
Query: 460 IKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTA 519
I+DIA W+LE+H GSTG+S DSL+EAGYPG+ LGD V G+AA+KITSKDFLFWFRSHTA
Sbjct: 301 IRDIAGWILEHHDGSTGVSIDSLMEAGYPGSSVLGDVVSGMAAIKITSKDFLFWFRSHTA 360
Query: 520 KEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSL 579
KEIKWGGAKHD KD GRKMHPRSSFKAFLEVVK+R LPWEDVEMDAIHSLQLILRGSL
Sbjct: 361 KEIKWGGAKHDHVDKDDGRKMHPRSSFKAFLEVVKRRCLPWEDVEMDAIHSLQLILRGSL 420
Query: 580 QDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIE 618
+DE DSK IVN VD RI+ +DEL +TNEMVRL+E
Sbjct: 421 KDETVNDSKTIVNALMVDARIQGVDELCNVTNEMVRLME 459
>gi|225463382|ref|XP_002271671.1| PREDICTED: phytochrome E [Vitis vinifera]
gi|183239020|gb|ACC60968.1| phytochrome E [Vitis vinifera]
Length = 1124
Score = 805 bits (2078), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/656 (60%), Positives = 492/656 (75%), Gaps = 20/656 (3%)
Query: 27 AQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLIQPFG 81
AQ + DA+L +F++S F+YS SV ++ +VP + AYL RVQRG L+QPFG
Sbjct: 38 AQYNADARLLAEFEQSGESGKSFNYSRSV--MNAPESVPEDQIIAYLSRVQRGGLVQPFG 95
Query: 82 CMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKA 141
CM+A++E F ++ YSEN+ + L L + + Q +L +G+DVRTLFT +A+L KA
Sbjct: 96 CMLAIEEPTFRIISYSENSMDFLGL--NTLSETTQLKSL-IGVDVRTLFTPPSSASLAKA 152
Query: 142 ANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLA 201
A E++LLNPI +H +++ K FYAILHRIDVG+VIDLEP D ++ AGA++S KLA
Sbjct: 153 AMSREISLLNPIWVHSRSAQKTFYAILHRIDVGIVIDLEPTRSGDSALSLAGAVQSQKLA 212
Query: 202 AKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPY 261
+AISRLQSLP G+I +LCD +V +V LTGYDRVMVYKFH+D+HGEVV+E RR DLEPY
Sbjct: 213 VRAISRLQSLPGGDIGVLCDTVVEDVQKLTGYDRVMVYKFHDDDHGEVVSEIRRSDLEPY 272
Query: 262 LGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCH 321
LG HYPATDIPQA+RFL +N+VR+ICDC A V+VIQ ++L QPL L STLR+PHGCH
Sbjct: 273 LGLHYPATDIPQAARFLFKQNRVRIICDCNAKAVRVIQSEELKQPLCLVNSTLRSPHGCH 332
Query: 322 ARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEF 381
+YM NMG IASL M+V IN ND KLWGLVVCHHTSPR+VPFPLRYACEF
Sbjct: 333 LQYMFNMGCIASLAMAVVIN------GND---ATKLWGLVVCHHTSPRYVPFPLRYACEF 383
Query: 382 LIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAA 441
L+Q FG+Q+ E++L++QL EK ILR QT+LCDMLLR++P+GIVT +P++MDL+KCDGAA
Sbjct: 384 LMQAFGLQLYMELQLASQLAEKKILRMQTLLCDMLLREAPLGIVTHSPSIMDLLKCDGAA 443
Query: 442 LYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIA 501
LYY G+ WLLGVTPTE Q+KDIAEWLL H STGLSTDSL +AGYPGA LGDAVCG+A
Sbjct: 444 LYYGGRCWLLGVTPTESQVKDIAEWLLTEHGDSTGLSTDSLADAGYPGAALLGDAVCGMA 503
Query: 502 AVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWE 561
+ITSKDFL WFRSHTAKE+KWGGAKH KD G +MHPRSSFKAFLEVVK RSLPWE
Sbjct: 504 TARITSKDFLLWFRSHTAKEVKWGGAKHHPEDKDDGGRMHPRSSFKAFLEVVKSRSLPWE 563
Query: 562 DVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAA 621
+++AIHSLQLI+R S QD K++V+ D ++ ++EL + EMV+LIETA
Sbjct: 564 VSDINAIHSLQLIMRDSFQDIEDSSGKVMVHTQKYDSEMQGLNELGSVACEMVKLIETAT 623
Query: 622 VPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVD-LVAGDSVDVVKNMLSSAF 676
PI VD+SG +NGWN+K AELTGL +A+G +LVD +V D V N+L A
Sbjct: 624 APIFGVDSSGCINGWNAKIAELTGLQAKEAMGKSLVDEIVHEDLRGAVDNLLCRAL 679
>gi|356532946|ref|XP_003535030.1| PREDICTED: phytochrome E-like [Glycine max]
Length = 1120
Score = 803 bits (2074), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/687 (58%), Positives = 496/687 (72%), Gaps = 26/687 (3%)
Query: 1 MSSKSTNK-TNYSRSSSARSKQNAR---VAAQTSIDAKLAEDFDES-----DFDYSTSVN 51
MS S K + S S+SA S N++ + AQ S DA++ +F++S FDYS V
Sbjct: 1 MSFGSRGKLKDTSLSTSAESNMNSKRDKILAQYSADAEILAEFEQSGVSGKSFDYSRMV- 59
Query: 52 ISSSTSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAV 111
V ++AYL ++QRG LIQPFGCM+A++E F ++G+S+N ++L L
Sbjct: 60 -LDPPRLVSEQKMTAYLSKIQRGGLIQPFGCMLAIEESTFRIIGFSDNCFQLLGLERQ-- 116
Query: 112 PNIEQQDALTL-GIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHR 170
I+ + + L G+D TLFT A+L KAA E++LLNPI ++ +T+ KPFYAILHR
Sbjct: 117 --IDSKQFMGLIGVDATTLFTPPSGASLAKAAASREISLLNPIWVYARTTQKPFYAILHR 174
Query: 171 IDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDL 230
IDVG+VIDLEP D ++ AGA++S KLA +AISRLQSLP +I LLCD +V EV L
Sbjct: 175 IDVGVVIDLEPARMSDPALSLAGAVQSQKLAVRAISRLQSLPGEDIGLLCDTVVEEVQKL 234
Query: 231 TGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDC 290
TGYDRVMVYKFHED+HGEVV+E RR DLEPYLG HYPATDIPQASRFL +N+VRMICDC
Sbjct: 235 TGYDRVMVYKFHEDDHGEVVSEIRRSDLEPYLGLHYPATDIPQASRFLFKQNRVRMICDC 294
Query: 291 LAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDND 350
A PVKVIQ ++L QPL L STLR PHGCH +YM NMGSIASLVM++ +N
Sbjct: 295 HAKPVKVIQSEELRQPLCLVNSTLRLPHGCHTQYMANMGSIASLVMAIVVN--------- 345
Query: 351 QEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQT 410
+ +LWGL+VCHHTSPR+V FP+RYACEFL+Q FG+Q+ E++L++Q+ EK IL+TQT
Sbjct: 346 GKHATRLWGLLVCHHTSPRYVSFPVRYACEFLMQAFGLQLYMEIQLASQMAEKRILKTQT 405
Query: 411 VLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEY 470
+LCDMLLRD+P+GIV Q+P++MDLVKCDGAALYY G WLLG TPTE Q+KDIAEWLL
Sbjct: 406 LLCDMLLRDAPLGIVNQSPSIMDLVKCDGAALYYEGNCWLLGTTPTEAQVKDIAEWLLSN 465
Query: 471 HRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHD 530
H STGL+TDSL +AGYPGA +LGDAVCG+A +I SK FLFWFRSHTAKE+KWGGAKH
Sbjct: 466 HGDSTGLTTDSLADAGYPGAASLGDAVCGMATARINSKHFLFWFRSHTAKEVKWGGAKHH 525
Query: 531 SGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMI 590
KD G KM+PRSSFKAFLEVVK +SLPWE E++AIHSLQLI+R S QD K +
Sbjct: 526 PEDKDDGGKMNPRSSFKAFLEVVKSKSLPWEVPEINAIHSLQLIIRDSFQDTENTGPKTL 585
Query: 591 VNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQ 650
V D +DEL + EMVRLIETA VPI VD G +NGWN+K AELTGL +
Sbjct: 586 TYVQKSDTATGGMDELSSVALEMVRLIETATVPIFGVDLGGVINGWNTKIAELTGLQASE 645
Query: 651 AIGTALV-DLVAGDSVDVVKNMLSSAF 676
A+G +LV +++ DS D K+ LS A
Sbjct: 646 AMGKSLVNEIIHADSCDTFKSTLSRAL 672
>gi|183239028|gb|ACC60972.1| phytochrome E [Vitis riparia]
Length = 1124
Score = 803 bits (2073), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/656 (59%), Positives = 492/656 (75%), Gaps = 20/656 (3%)
Query: 27 AQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLIQPFG 81
AQ + DA+L +F++S F+YS SV ++ +VP + AYL R+QRG L+QPFG
Sbjct: 38 AQYNADARLLAEFEQSGESGKSFNYSRSV--MNAPESVPEDQIIAYLSRIQRGGLVQPFG 95
Query: 82 CMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKA 141
CM+A++E F ++ YSEN+ + L L + + Q +L +G+DVRTLFT +A+L KA
Sbjct: 96 CMLAIEEPTFRIISYSENSMDFLGL--NTLSETTQLKSL-IGVDVRTLFTPPSSASLAKA 152
Query: 142 ANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLA 201
A E++LLNPI +H +++ K FYAILHRIDVG+VIDLEP D ++ AGA++S KLA
Sbjct: 153 AMSREISLLNPIWVHSRSAQKTFYAILHRIDVGIVIDLEPTRSGDPALSLAGAVQSQKLA 212
Query: 202 AKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPY 261
+AISRLQSLP G+I +LCD +V +V LTGYDRVMVYKFH+D+HGEVV+E RR DLEPY
Sbjct: 213 VRAISRLQSLPGGDIGVLCDTVVEDVQKLTGYDRVMVYKFHDDDHGEVVSEIRRSDLEPY 272
Query: 262 LGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCH 321
LG HYPATDIPQA+RFL +N+VR+ICDC A V+VIQ ++L QPL L STLR+PHGCH
Sbjct: 273 LGLHYPATDIPQAARFLFKQNRVRIICDCNAKAVRVIQSEELKQPLCLVNSTLRSPHGCH 332
Query: 322 ARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEF 381
+YM NMG IASL M+V IN ND KLWGLVVCHHTSPR+VPFPLRYACEF
Sbjct: 333 LQYMVNMGCIASLAMAVVIN------GND---ATKLWGLVVCHHTSPRYVPFPLRYACEF 383
Query: 382 LIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAA 441
L+Q FG+Q+ E++L++QL EK ILR QT+LCDMLLR++P+GIVT +P++MDL+KCDGAA
Sbjct: 384 LMQAFGLQLYMELQLASQLAEKKILRMQTLLCDMLLREAPLGIVTHSPSIMDLLKCDGAA 443
Query: 442 LYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIA 501
L+Y G+ WLLGVTPTE Q+KDIAEWLL H STGLSTDSL +AGYPGA LGDAVCG+A
Sbjct: 444 LHYGGRCWLLGVTPTESQVKDIAEWLLTEHGDSTGLSTDSLADAGYPGAALLGDAVCGMA 503
Query: 502 AVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWE 561
+ITSKDFLFWFRSHTAKE+KWGGAKH KD G +MHPRSSFKAFLEVVK RSLPWE
Sbjct: 504 TARITSKDFLFWFRSHTAKEVKWGGAKHHPEDKDDGGRMHPRSSFKAFLEVVKSRSLPWE 563
Query: 562 DVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAA 621
E++AIHSLQLI+R S QD K++V+ D ++ ++EL + EMV+LIETA
Sbjct: 564 VSEINAIHSLQLIMRDSFQDIEDSSGKVMVHAQKYDSEMQGLNELSSVACEMVKLIETAT 623
Query: 622 VPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVD-LVAGDSVDVVKNMLSSAF 676
PI VD+SG +NGWN+K AELT L +A+G +LVD +V D V N+L A
Sbjct: 624 APIFGVDSSGCINGWNAKIAELTELQAKEAMGKSLVDEIVHEDLRGAVDNLLCRAL 679
>gi|351722971|ref|NP_001238286.1| phytochrome A [Glycine max]
gi|1172495|sp|P42500.1|PHYA_SOYBN RecName: Full=Phytochrome A
gi|515749|gb|AAA33957.1| phytochrome A [Glycine max]
gi|515751|gb|AAA33999.1| phytochrome A [Glycine max]
Length = 1131
Score = 803 bits (2073), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/675 (58%), Positives = 502/675 (74%), Gaps = 27/675 (4%)
Query: 27 AQTSIDAKLAEDFDESDFDYSTSVNISSSTS----NVPSS--TVSAYLQRVQRGRLIQPF 80
AQ ++DAK+ F+ES + S ++ S + N P S +AYL RG++IQPF
Sbjct: 23 AQATVDAKIHATFEESGSSFDYSSSVRVSGTADGVNQPRSDKVTTAYL----RGKMIQPF 78
Query: 81 GCMIAVDEQNFT----VLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAA 136
GC++A+DE+N V+ YSEN PEML + HAVP++ AL +G D++TLFT+ +
Sbjct: 79 GCLLAIDEKNHMQTCKVIAYSENEPEMLTMVSHAVPSVGDHPALGIGTDIKTLFTAPSVS 138
Query: 137 ALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALK 196
LQKA +V+LLNPIL+HCKTSGKPFYAI+HR+ L++D EPV P +VP+TAAGAL+
Sbjct: 139 GLQKALGCADVSLLNPILVHCKTSGKPFYAIVHRVTGSLIVDFEPVKPYEVPMTAAGALQ 198
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
SYKLAAKAI+RLQSLPSGN+ LCD +V EV +LTGYDRVM YKFHED+HGEV+ E +P
Sbjct: 199 SYKLAAKAITRLQSLPSGNMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVIREITKP 258
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
LEPYLG HYPATDIPQASRFL KNKVRMI DC A V+V+QD+KL L LCGSTLRA
Sbjct: 259 CLEPYLGLHYPATDIPQASRFLFRKNKVRMIVDCHAKHVRVLQDEKLQFDLILCGSTLRA 318
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK---LWGLVVCHHTSPRFVPF 373
PH CHA+YM NM SIASLV++V +N+ E++ D D Q +K LWGLVVCH+T+PRFVPF
Sbjct: 319 PHSCHAQYMANMDSIASLVLAVVVNDNEEDGDTDAVQPQKTERLWGLVVCHNTTPRFVPF 378
Query: 374 PLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMD 433
PLRYA EFL QVF V+KE+EL Q+ EK+IL L ML+RD+P+GI +++PN+MD
Sbjct: 379 PLRYAREFLPQVFADHVHKEIELEYQIIEKNILHHPGHLLCMLMRDAPLGIASESPNIMD 438
Query: 434 LVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALAL 493
LVKCDGAAL YR K+W LGVTP+E QI++IA WL EYH ST STDSL +AG+P AL+L
Sbjct: 439 LVKCDGAALIYRNKVWRLGVTPSEPQIREIALWLSEYHMDSTSFSTDSLFDAGFPSALSL 498
Query: 494 GDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVV 553
GD VCG+A+V++T+KD +FWFRSHTA EI+WGGAKH++G KD R+MHPRSSFKAFLEVV
Sbjct: 499 GDVVCGMASVRVTAKDMVFWFRSHTAAEIRWGGAKHEAGEKDDSRRMHPRSSFKAFLEVV 558
Query: 554 KQRSLPWEDVEMDAIHSLQLILRGSLQDEVAE---DSKMI------VNVPSVDD-RIEKI 603
K RSLPW++ EMDAIHSLQ+ILR + +++ ++K I + + ++D +IE++
Sbjct: 559 KARSLPWKEYEMDAIHSLQIILRNAFKEDTESLDLNAKAINTRLRDLKIEGINDLKIERM 618
Query: 604 DELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGD 663
EL +T+E+VRL TA VPILAVD G VNGWN K AELTGL + +A G L+ LV
Sbjct: 619 QELEAVTSEIVRLDYTATVPILAVDVDGLVNGWNIKIAELTGLPIGEATGKHLLTLVEDS 678
Query: 664 SVDVVKNMLSSAFLA 678
S D VK ML+ A L
Sbjct: 679 STDRVKKMLNLALLG 693
>gi|363547641|gb|AEW26863.1| phytochrome P [Ceratozamia miqueliana]
Length = 582
Score = 801 bits (2068), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/594 (64%), Positives = 471/594 (79%), Gaps = 15/594 (2%)
Query: 84 IAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAAN 143
+AV+E+ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTL T S A L+KAA
Sbjct: 1 LAVEERTFRIIAYSENAAGMLDLAPQSVPTMEKE-FLTIGTDVRTLLTPSSAMPLEKAAA 59
Query: 144 FGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAK 203
E++L NPI + ++SGK FYAI+HRIDVG+VID EP+ D ++ AGA++S KLA +
Sbjct: 60 AQEISLANPISMQSRSSGKAFYAIVHRIDVGMVIDFEPLG--DAALSVAGAVQSQKLAVR 117
Query: 204 AISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLG 263
AISRLQ+LP+G+I +LCD +V +V +LTGYDRVMVY+FHEDEHGEV+AE RR DLEPYLG
Sbjct: 118 AISRLQALPAGDIGMLCDSVVQDVRELTGYDRVMVYRFHEDEHGEVMAEMRRSDLEPYLG 177
Query: 264 FHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHAR 323
HYPATDIPQASRFL M+N+VRMICDC + PV+V+Q +L QPL L GSTLRAPHGCHA+
Sbjct: 178 LHYPATDIPQASRFLFMQNRVRMICDCRSAPVRVLQAAELRQPLCLVGSTLRAPHGCHAQ 237
Query: 324 YMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLI 383
YM NMGSIASLVM+V +N KLWGLVVCHHTSPR VPFP+R ACEFL+
Sbjct: 238 YMANMGSIASLVMAVVVN-----------ANTKLWGLVVCHHTSPRAVPFPVRCACEFLM 286
Query: 384 QVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALY 443
Q FG+Q+N E++L+AQ EK IL+TQT+LCDMLLRD+P+GIVTQTP++MDLV+CDGAAL
Sbjct: 287 QAFGLQLNMELQLAAQATEKRILKTQTLLCDMLLRDAPIGIVTQTPSIMDLVRCDGAALC 346
Query: 444 YRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAV 503
Y G +W LGV P E QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDAVCG+AA
Sbjct: 347 YGGTVWALGVAPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAA 406
Query: 504 KITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDV 563
+IT+KDFLFWFRS TAKEIKWGGAKH +D GR+MHPRSSFKAFLEVVK+RS PWE+
Sbjct: 407 RITAKDFLFWFRSQTAKEIKWGGAKHHPDDRDDGRRMHPRSSFKAFLEVVKRRSFPWENA 466
Query: 564 EMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVP 623
EMDAIHSLQLILRGS +D ++K +V+ D R++ ++EL + +EMVRLIETA P
Sbjct: 467 EMDAIHSLQLILRGSFEDIDDAETKTMVHSRLNDLRVQSMEELSSVASEMVRLIETATAP 526
Query: 624 ILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
ILAVD+ G VNGWN+K AELTGL V +A G +LV DLV DS++ V+ +L +A
Sbjct: 527 ILAVDSRGLVNGWNAKIAELTGLPVGEATGKSLVGDLVYEDSMETVERLLRNAL 580
>gi|255642605|gb|ACU21560.1| phytochrome A [Medicago sativa]
Length = 1001
Score = 800 bits (2066), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/560 (66%), Positives = 457/560 (81%), Gaps = 5/560 (0%)
Query: 122 LGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEP 181
+G D+RT+FT+ A+ALQKA F EV+LLNPIL+HCKTSGKPFYAI+HR+ L+ID EP
Sbjct: 2 IGTDIRTIFTAPSASALQKALGFAEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIIDFEP 61
Query: 182 VNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKF 241
V P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM YKF
Sbjct: 62 VKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKF 121
Query: 242 HEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDK 301
HED+HGEV+AE + LEPYLG HYPATDIPQA+RFL+MKNKVRMI DC A VKV+QD+
Sbjct: 122 HEDDHGEVIAEVTKTGLEPYLGLHYPATDIPQAARFLVMKNKVRMIVDCHAKHVKVLQDE 181
Query: 302 KLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ----EQGRKL 357
KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +N+++++ D+ ++ ++L
Sbjct: 182 KLPFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNDSDEDGDSADAVLPQKKKRL 241
Query: 358 WGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLL 417
WGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKE+EL Q+ EK+ILRTQT+LCDML+
Sbjct: 242 WGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEIELEYQILEKNILRTQTLLCDMLM 301
Query: 418 RDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGL 477
RD+P+GIV+Q+PN+MDLVKCDGAAL YR KLW+LG TP+E QI++IA W+ EYH STGL
Sbjct: 302 RDAPLGIVSQSPNIMDLVKCDGAALLYRNKLWILGSTPSEPQIREIALWMSEYHTDSTGL 361
Query: 478 STDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGG 537
STDSL +AG+PGAL L D VCG+AAV+ITSKD +FWFRSHTA EI+WGGAKH+ G +D G
Sbjct: 362 STDSLSDAGFPGALKLNDTVCGMAAVRITSKDIVFWFRSHTAAEIRWGGAKHEPGEQDDG 421
Query: 538 RKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVNVPSV 596
RKMHPRSSFKAFLEVVK RS+PW+D EMDAIHSLQLILR + +D ++ + + +N
Sbjct: 422 RKMHPRSSFKAFLEVVKARSIPWKDFEMDAIHSLQLILRNASKDTDMIDLNSKAINTRLN 481
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
D +IE + EL +T+EMVRLIETA VPILAVD G VNGWN K +ELTGL V +AIG L
Sbjct: 482 DLKIEGMQELEAVTSEMVRLIETATVPILAVDVDGMVNGWNIKISELTGLPVGEAIGKHL 541
Query: 657 VDLVAGDSVDVVKNMLSSAF 676
+ LV S D+VK ML+ A
Sbjct: 542 LTLVEDSSTDIVKKMLNLAL 561
>gi|13383418|gb|AAK20972.1| phytochrome C [Illicium oligandrum]
Length = 459
Score = 800 bits (2065), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/460 (81%), Positives = 416/460 (90%), Gaps = 1/460 (0%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HRIDVGLVIDLEPVNP DVP+TAAGALKSYKLAAKAISRLQSLPSGNI +L
Sbjct: 1 SGKPFYAIMHRIDVGLVIDLEPVNPADVPITAAGALKSYKLAAKAISRLQSLPSGNIGIL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
CDVLV EVS+LTGYDRVM YKFHEDEHGEV+AE RR DLEPYLG HYPATDIPQASRFL
Sbjct: 61 CDVLVREVSELTGYDRVMAYKFHEDEHGEVIAEYRRTDLEPYLGLHYPATDIPQASRFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDC APPVKVIQDKKL QPLSL GSTLRAPHGCHA+YM NMGSIASLVMSVT
Sbjct: 121 MKNKVRMICDCYAPPVKVIQDKKLAQPLSLGGSTLRAPHGCHAQYMANMGSIASLVMSVT 180
Query: 340 INEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQ 399
INE DE ++Q++GRKLWGLVVCHHTSPRFVPFPLRYACEFL+QV G+Q+NKEVEL AQ
Sbjct: 181 INEDYDETSSNQQKGRKLWGLVVCHHTSPRFVPFPLRYACEFLLQVCGIQLNKEVELVAQ 240
Query: 400 LREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQ 459
++EKHIL+TQT+LCDMLLRD+P+GI+T++PNVMDLVKCDGAALYY +LWLLG+TPTE Q
Sbjct: 241 MKEKHILKTQTLLCDMLLRDAPIGIMTKSPNVMDLVKCDGAALYYGKQLWLLGITPTEAQ 300
Query: 460 IKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTA 519
I+DI EWLLE H +TGLSTDSL+EAGYPGA LGD VCG+AA+K+ SKDFLFWFRSHTA
Sbjct: 301 IRDITEWLLECHDSTTGLSTDSLMEAGYPGATTLGDTVCGMAAIKVASKDFLFWFRSHTA 360
Query: 520 KEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSL 579
KEIKWGG+KHD KD G+KMHPRSSFKAFLEVVK+RSLPWEDVEMDAIHSLQLILRGSL
Sbjct: 361 KEIKWGGSKHDPADKD-GKKMHPRSSFKAFLEVVKRRSLPWEDVEMDAIHSLQLILRGSL 419
Query: 580 QDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIET 619
Q + ++K IV+ D++I+ DELRI+TNEMVRLIET
Sbjct: 420 QQVLESETKAIVDARLDDEQIQGPDELRIVTNEMVRLIET 459
>gi|1172496|sp|P42499.1|PHYB_SOYBN RecName: Full=Phytochrome B
gi|516103|gb|AAA34000.1| phytochrome B [Glycine max]
Length = 1156
Score = 800 bits (2065), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/651 (60%), Positives = 482/651 (74%), Gaps = 24/651 (3%)
Query: 44 FDYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEM 103
F+YS S+ I+S + VP ++AYL ++QRG IQPFG MIAVDE +F +LGYS+NA +M
Sbjct: 64 FNYSESIRIASES--VPEQQITAYLVKIQRGGFIQPFGSMIAVDEPSFRILGYSDNARDM 121
Query: 104 LDLAPHAVPNIEQQD--------------------ALTLGIDVRTLFTSSGAAALQKAAN 143
L + P +VP+++ ++ A LG DVR LFT S A L+KA +
Sbjct: 122 LGITPQSVPSLDDKNDAAFALGPQSVPSLDDKNDAAFALGTDVRALFTHSSALLLEKAFS 181
Query: 144 FGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAK 203
E++L+NPI IH +TSGKPFY ILHRIDVG+VIDLEP +D ++ AGA++S + +
Sbjct: 182 AREISLMNPIWIHSRTSGKPFYGILHRIDVGIVIDLEPARTEDPALSIAGAVQSQEALVR 241
Query: 204 AISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLG 263
AIS+LQSLPS ++ LLCD +V V +LTGYDRVMVYKFHEDEHGEVV+E +RPDLEPY+G
Sbjct: 242 AISQLQSLPSADVKLLCDTVVESVRELTGYDRVMVYKFHEDEHGEVVSESKRPDLEPYIG 301
Query: 264 FHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHAR 323
HYPATDIPQASRFL +N+VRMI DC A V+V+QD+ L QPL L GSTL APHGCHA+
Sbjct: 302 LHYPATDIPQASRFLFKQNRVRMIVDCHASAVRVVQDEALVQPLCLVGSTLGAPHGCHAQ 361
Query: 324 YMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLI 383
YM NMGSIASLVM+V IN DE +LWGLVVCHHTS R +PFPLRYACEFL+
Sbjct: 362 YMANMGSIASLVMAVIIN-GNDEEGVGGRSSMRLWGLVVCHHTSARCIPFPLRYACEFLM 420
Query: 384 QVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALY 443
Q FG+Q+N E++L+AQ EK +LRTQT+LCDMLLRDSP GIVTQ+P++MDLVKCDGAALY
Sbjct: 421 QAFGLQLNMELQLAAQSLEKRVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALY 480
Query: 444 YRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAV 503
++G + LGVTPTE QI+DI EWLL +H STGLSTDSL +AGYPG LG G
Sbjct: 481 FQGNYYPLGVTPTEAQIRDIIEWLLAFHGDSTGLSTDSLGDAGYPGLPRLGMQFVGWQVA 540
Query: 504 KITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDV 563
IT KDFLFWFRSHTAKEIKWGGAK + G++MHP SSFKAFLEVVK RSLPWE+
Sbjct: 541 YITEKDFLFWFRSHTAKEIKWGGAKLILRTRMMGQRMHPLSSFKAFLEVVKSRSLPWENA 600
Query: 564 EMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVP 623
EMDAIHSLQLILR S +D +SK +V+ + ++ +DEL + EMVRLIETA P
Sbjct: 601 EMDAIHSLQLILRDSFKDAEHRNSKAVVDPHVSEQELQGVDELSSVAREMVRLIETATAP 660
Query: 624 ILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLS 673
I AVD G+VNGWN+K +ELTGL V++A+G +LV DLV +S + V +LS
Sbjct: 661 IFAVDVDGHVNGWNAKVSELTGLPVEEAMGKSLVHDLVFKESEETVNKLLS 711
>gi|147775698|emb|CAN62723.1| hypothetical protein VITISV_030984 [Vitis vinifera]
Length = 1162
Score = 798 bits (2062), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/683 (58%), Positives = 500/683 (73%), Gaps = 24/683 (3%)
Query: 4 KSTNKTNYSRSSSARSKQNAR----VAAQTSIDAKLAEDFDES-----DFDYSTSVNISS 54
++T++T SS+A + N AQ + DA+L +F++S F+YS SV +
Sbjct: 11 RATHRTPTFSSSAASNMNNPNSRNNTIAQYNADARLLAEFEQSGESGKSFNYSRSV--MN 68
Query: 55 STSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNI 114
+ +VP + AYL R QRG L+QPFGCM+A++E F ++ YSEN+ + L L + +
Sbjct: 69 APESVPEDQIIAYLSRXQRGGLVQPFGCMLAIEEPTFRIISYSENSMDFLGL--NTLSET 126
Query: 115 EQQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVG 174
Q +L +G+DVRTLFT +A+L KAA E++LLNPI +H +++ K FYAILHRIDVG
Sbjct: 127 TQLKSL-IGVDVRTLFTPPSSASLAKAAMSREISLLNPIWVHSRSAQKTFYAILHRIDVG 185
Query: 175 LVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYD 234
+VIDLEP D ++ AGA++S KLA +AISRLQSLP G+I +LCD +V +V LTGYD
Sbjct: 186 IVIDLEPTRSGDXALSLAGAVQSQKLAVRAISRLQSLPGGDIGVLCDTVVEDVQKLTGYD 245
Query: 235 RVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPP 294
RVMVYKFH+D+HGEVV+E RR DLEPYLG HYPATDIPQA+RFL +N VR+ICDC A
Sbjct: 246 RVMVYKFHDDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNXVRIICDCNAKA 305
Query: 295 VKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG 354
V+VIQ ++L QPL L STLR+PHGCH +YM NMG IASL M+V IN ND
Sbjct: 306 VRVIQSEELKQPLCLVNSTLRSPHGCHLQYMXNMGCIASLAMAVVIN------GND---A 356
Query: 355 RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCD 414
KLWGLVVCHHTSPR+VPFPLRYACEFL+Q FG+Q+ E++L++QL EK ILR QT+LCD
Sbjct: 357 TKLWGLVVCHHTSPRYVPFPLRYACEFLMQAFGLQLYMELQLASQLAEKKILRMQTLLCD 416
Query: 415 MLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGS 474
MLLR++P+GIVT +P++MDL+KCDGAALYY G+ WLLGVTPTE Q+KDIAEWLL H S
Sbjct: 417 MLLREAPLGIVTHSPSIMDLLKCDGAALYYGGRCWLLGVTPTESQVKDIAEWLLTEHGDS 476
Query: 475 TGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGK 534
TGLSTDSL +AGYPGA LGDAVCG+A +ITSKDFL WFRSHTAKE+KWGGAKH K
Sbjct: 477 TGLSTDSLADAGYPGAALLGDAVCGMATARITSKDFLXWFRSHTAKEVKWGGAKHHPEDK 536
Query: 535 DGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVP 594
D G +MHPRSSFKAFLEVVK RSLPWE ++AIHSLQLI+R S QD K++V+
Sbjct: 537 DDGGRMHPRSSFKAFLEVVKSRSLPWEVSXINAIHSLQLIMRDSFQDIEDSSGKVMVHXQ 596
Query: 595 SVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGT 654
D ++ ++EL + EMV+LIETA PI VD+SG +NGWN+K AELT L +A+G
Sbjct: 597 KYDSEMQGLNELXSVACEMVKLIETATAPIFGVDSSGCINGWNAKIAELTXLQAKEAMGK 656
Query: 655 ALVD-LVAGDSVDVVKNMLSSAF 676
+LVD +V D V N+L A
Sbjct: 657 SLVDEIVHEDLRGAVDNLLCRAL 679
>gi|6708129|gb|AAF25812.1|AF178571_1 phytochrome E [Solanum lycopersicum]
Length = 1137
Score = 798 bits (2062), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/675 (57%), Positives = 483/675 (71%), Gaps = 25/675 (3%)
Query: 12 SRSSSARSKQNARVAA--QTSIDAKLAEDFDESD-----FDYSTSVNISSSTSNVPSSTV 64
+ S+++ K NA AA Q + DAKL +F++S FDYS SV +N +
Sbjct: 33 TSSAASNMKNNASKAALAQYNADAKLMAEFEQSSVSGKSFDYSKSVLFPPHEAN--EEEI 90
Query: 65 SAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGI 124
++YL R+QRG L+QPFGCM+A++E F ++GYSEN +ML P + +G+
Sbjct: 91 TSYLSRIQRGGLVQPFGCMVAIEEPTFKIIGYSENCYDMLGFKP------TKMKLGLIGV 144
Query: 125 DVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNP 184
D R LFT S +L K E++LLNPI +H +T+ KPFYAILHRIDVG+VIDLEP N
Sbjct: 145 DARNLFTPSSGDSLAKVMASREISLLNPIWVHSRTTHKPFYAILHRIDVGIVIDLEPANS 204
Query: 185 DDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHED 244
D + AGA++S KLA ++ISRLQSLP G+I +LCD V +V LTGYDRVMVYKFH+D
Sbjct: 205 SDPALLLAGAVQSQKLAVRSISRLQSLPGGDIGVLCDTAVEDVQKLTGYDRVMVYKFHDD 264
Query: 245 EHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLD 304
HGE+V+E RR DLEPYLG HYPATDIPQA+RFL +N+VRMICDC A PVKV+Q ++L
Sbjct: 265 NHGEIVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNAQPVKVVQSEELK 324
Query: 305 QPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCH 364
QP+ L STLR+PH CH++YM NMGSI+SLVM++ IN + KLWGL+VCH
Sbjct: 325 QPICLVNSTLRSPHECHSKYMANMGSISSLVMAILINSGDS---------MKLWGLIVCH 375
Query: 365 HTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGI 424
HTSPR+VPFPLRYACEF Q FG+Q+N E++L++QL EK L+ QT+LCDMLLRD P G+
Sbjct: 376 HTSPRYVPFPLRYACEFFTQAFGLQLNMELQLASQLAEKKTLQMQTLLCDMLLRDVPFGV 435
Query: 425 VTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVE 484
VTQ+P++MDLVKCDGAALY GK WLLGVTPTE Q+KDIA+WLL H+ STGLSTD L +
Sbjct: 436 VTQSPSIMDLVKCDGAALYCGGKCWLLGVTPTEAQVKDIAQWLLVAHKDSTGLSTDCLAD 495
Query: 485 AGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRS 544
AGYPGA LGDAVCG+A +ITSKDFLFWFRSHTAKE+KWGGAKH KD G KMHPRS
Sbjct: 496 AGYPGAALLGDAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKDDGGKMHPRS 555
Query: 545 SFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKID 604
SF AFLEVVK RSLPWE E++AIHSLQ+I+R S+Q+ K + D +D
Sbjct: 556 SFNAFLEVVKSRSLPWEIPEINAIHSLQIIMRESIQENENSSLKTLTTSQQNDADGPSMD 615
Query: 605 ELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGD 663
EL + EMVRLIETA PI VD SG +NGWN K A+LTGL +A+G +L+ D+ D
Sbjct: 616 ELSSVAMEMVRLIETATAPIFGVDPSGLINGWNEKIADLTGLHASEAVGMSLINDITHED 675
Query: 664 SVDVVKNMLSSAFLA 678
S V+ +L A L
Sbjct: 676 SRGTVEKVLHRALLG 690
>gi|363547649|gb|AEW26867.1| phytochrome P [Ceratozamia sabatoi]
Length = 582
Score = 798 bits (2061), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/594 (64%), Positives = 471/594 (79%), Gaps = 15/594 (2%)
Query: 84 IAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAAN 143
+AV+E+ F ++ YSENA MLDLAP +VP +E++ LT+G DVRTLFT S A +L+KAA
Sbjct: 1 LAVEERTFRIIAYSENAAGMLDLAPQSVPTMEKE-FLTIGTDVRTLFTPSSAMSLEKAAA 59
Query: 144 FGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAK 203
E++L NPI + ++SGK FYAI+HRIDVG+VID EP+ D ++ AGA++S KLA +
Sbjct: 60 AQEISLANPISMQSRSSGKAFYAIVHRIDVGMVIDFEPLG--DAALSVAGAVQSQKLAVR 117
Query: 204 AISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLG 263
AISRLQ+LP+G+I +LCD +V +V +LTGYDRVMVY FHEDEHGEV+AE RR DLEPYLG
Sbjct: 118 AISRLQALPAGDIGMLCDSVVQDVRELTGYDRVMVYGFHEDEHGEVMAEMRRSDLEPYLG 177
Query: 264 FHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHAR 323
HYPATDIPQASRFL ++N+VRMICDC + PV+V+Q +L QPL L GSTLRAPHGCHA+
Sbjct: 178 LHYPATDIPQASRFLFIQNRVRMICDCRSAPVRVLQAAELRQPLCLVGSTLRAPHGCHAQ 237
Query: 324 YMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLI 383
YM NMGSIASLVM+V +N KLWGLVVCHHTSPR VPFP+R ACEFL+
Sbjct: 238 YMANMGSIASLVMAVVVN-----------ANAKLWGLVVCHHTSPRTVPFPVRCACEFLM 286
Query: 384 QVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALY 443
Q FG+Q+N E++L+AQ EK IL+TQT+LCDMLLRD+P+GIVTQTP++MDLV+CDGAAL
Sbjct: 287 QAFGLQLNMELQLAAQATEKRILKTQTLLCDMLLRDAPIGIVTQTPSIMDLVRCDGAALC 346
Query: 444 YRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAV 503
Y G +W LGV P E QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDAVCG+AA
Sbjct: 347 YGGTVWALGVAPAEAQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAA 406
Query: 504 KITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDV 563
+IT+KDFLFWFRS TAKEIKWGGAKH +D R+MHPRSSFKAFLEVVK+RS PWE+
Sbjct: 407 RITAKDFLFWFRSQTAKEIKWGGAKHHPDDRDDARRMHPRSSFKAFLEVVKRRSFPWENA 466
Query: 564 EMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVP 623
EMDAIHSLQLILRGS +D ++K +V+ D R++ ++EL + +EMVRLIETA P
Sbjct: 467 EMDAIHSLQLILRGSFEDIDDTETKTMVHSRLNDLRVQSMEELSSVASEMVRLIETATAP 526
Query: 624 ILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
ILAVD+ G VNGWN+K AELTGL V +A G +LV DLV DS++ V+ +L +A
Sbjct: 527 ILAVDSRGLVNGWNAKIAELTGLPVGEATGRSLVGDLVYEDSMETVERLLRNAL 580
>gi|283131697|dbj|BAI63255.1| phytochrome E [Pieris nana]
Length = 657
Score = 798 bits (2060), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/678 (58%), Positives = 499/678 (73%), Gaps = 30/678 (4%)
Query: 7 NKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPS 61
N N +R S A + NA DA L ++FD+S F+YS SV + T VP+
Sbjct: 1 NNPNNNRKSKAVALYNA--------DAGLLDEFDQSADSGKSFNYSRSVVNAPKT--VPA 50
Query: 62 STVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALT 121
++AYL R+QRG LIQPFGCM+A++E +F ++GYSEN +L L + V Q+ L
Sbjct: 51 EQITAYLSRIQRGGLIQPFGCMLAIEEPSFKIIGYSENCFILLGLNLNNVFESNQERGL- 109
Query: 122 LGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEP 181
+GID RTLF+ S +L A E++LLNPI +H + + KPFYAILHRIDVG+VIDLEP
Sbjct: 110 IGIDARTLFSPSSGVSLVNAVGSKEISLLNPIWVHSRNTQKPFYAILHRIDVGIVIDLEP 169
Query: 182 VNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKF 241
V D ++ AGA++S KL +AISRLQSLP G+I +LCD +V +V LTGYDRVMVYKF
Sbjct: 170 VRSGDPALSLAGAVQSQKLVVRAISRLQSLPGGDIGVLCDRVVEDVQKLTGYDRVMVYKF 229
Query: 242 HEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDK 301
H+D+HGEVV+E R DLEPYLG HYPATDIPQA+RFL +N+VRMICDC + V+VI
Sbjct: 230 HDDDHGEVVSEIRSTDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCHSSQVRVIGTD 289
Query: 302 KLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLV 361
+L QPL L STLRAPHGCH +YM NMGSIASLV++V +N +ND KLWGLV
Sbjct: 290 ELKQPLCLVNSTLRAPHGCHTQYMANMGSIASLVLAVVVN------NNDS---MKLWGLV 340
Query: 362 VCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSP 421
VCHHTSPR+VPFPLRYACEFL+Q FG+Q+ E++L++QL EK +LR QT+LCDM LRD+P
Sbjct: 341 VCHHTSPRYVPFPLRYACEFLMQAFGLQLYMELQLASQLVEKKVLRMQTLLCDMRLRDAP 400
Query: 422 VGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDS 481
GIVTQ+P++MDLVKCDGAAL+Y GK WLLGVTPT+ Q+KDIAEWLL+ H STGLSTDS
Sbjct: 401 FGIVTQSPSIMDLVKCDGAALFYCGKCWLLGVTPTKSQVKDIAEWLLKNHADSTGLSTDS 460
Query: 482 LVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMH 541
L +AGYP A LGDAVCG+ +ITSKDFLFWFRSHTAKE+KWGGA H KD G +M+
Sbjct: 461 LADAGYPSAALLGDAVCGMVTARITSKDFLFWFRSHTAKEVKWGGAMHHPEDKDDGGRMY 520
Query: 542 PRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDS--KMIVNVPSVDDR 599
PRSSF AFLEVVK RSLPWE E++AIHSLQLI+R S + + EDS K +V D +
Sbjct: 521 PRSSFNAFLEVVKSRSLPWEISEINAIHSLQLIMRDSYR--MIEDSGPKGLVYTQIHDSK 578
Query: 600 IEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-D 658
++ +DEL + EMVRLIETA+ PI VD++G +NGWN+K ELTGL +AIG +L+ D
Sbjct: 579 VQGLDELSSVACEMVRLIETASAPIFGVDSAGLINGWNAKIVELTGLQASEAIGKSLLND 638
Query: 659 LVAGDSVDVVKNMLSSAF 676
+V DS VV+N++ AF
Sbjct: 639 IVREDSRGVVENLMCRAF 656
>gi|283131679|dbj|BAI63246.1| phytochrome E [Pieris nana]
Length = 657
Score = 797 bits (2058), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/678 (59%), Positives = 500/678 (73%), Gaps = 30/678 (4%)
Query: 7 NKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPS 61
N N +R S A + NA DA L ++FD+S F+YS SV + T VP+
Sbjct: 1 NNPNNNRKSKAVALYNA--------DAGLLDEFDQSADSGKSFNYSRSVVNAPKT--VPA 50
Query: 62 STVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALT 121
++AYL R+QRG LIQPFGCM+A++E +F ++GYSEN +L L + V Q+ L
Sbjct: 51 EQITAYLSRIQRGGLIQPFGCMLAIEEPSFKIIGYSENCFNLLGLNLNNVFESNQERGL- 109
Query: 122 LGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEP 181
+GIDVRTLF+ S +L A E++LLNPI +H + + KPFYAILHRIDVG+VIDLEP
Sbjct: 110 IGIDVRTLFSPSSGVSLVNAVGSKEISLLNPIWVHSRNTQKPFYAILHRIDVGIVIDLEP 169
Query: 182 VNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKF 241
D ++ AGA++S KL +AISRLQSLP G+I +LCD +V +V LTGYDRVMVYKF
Sbjct: 170 ARSGDPALSLAGAVQSQKLVVRAISRLQSLPGGDIGVLCDRVVEDVQKLTGYDRVMVYKF 229
Query: 242 HEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDK 301
H+D+HGEVV+E R DLEPYLG HYPATDIPQA+RFL +N+VRMICDC + V+VI
Sbjct: 230 HDDDHGEVVSEIRSTDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCHSSQVRVIGTD 289
Query: 302 KLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLV 361
+L QPL L STLRAPHGCH +YM NMGSIASLV++V +N DND KLWGLV
Sbjct: 290 ELKQPLCLVNSTLRAPHGCHTQYMANMGSIASLVLAVVVN------DNDS---MKLWGLV 340
Query: 362 VCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSP 421
VCHHTSPR+VPFPLRYACEFL+Q FG+Q+ E++L++QL EK +LR QT+LCDM LRD+P
Sbjct: 341 VCHHTSPRYVPFPLRYACEFLMQAFGLQLYMELQLASQLVEKKVLRMQTLLCDMRLRDAP 400
Query: 422 VGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDS 481
GIVTQ+P++MDLVKCDGAAL+Y GK WLLGVTPT+ Q+KDIAEWLL+ H STGLSTDS
Sbjct: 401 FGIVTQSPSIMDLVKCDGAALFYCGKCWLLGVTPTKSQVKDIAEWLLKNHADSTGLSTDS 460
Query: 482 LVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMH 541
L +AGYP A LGDAVCG+A +ITSKDFLFWFRSHTAKE+KWGGA H KD G +M+
Sbjct: 461 LADAGYPSAALLGDAVCGMATARITSKDFLFWFRSHTAKEVKWGGAMHHPEDKDDGGRMY 520
Query: 542 PRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDS--KMIVNVPSVDDR 599
PRSSF AFLEVVK RSLPWE E++AIHSLQLI+R S + + EDS K +V D +
Sbjct: 521 PRSSFNAFLEVVKSRSLPWEISEINAIHSLQLIMRDSYR--MIEDSGPKGLVYTQIHDSK 578
Query: 600 IEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-D 658
++ +DEL + EMVRLIETA+ PI VD++G +NGWN+K ELTGL +AIG +L+ D
Sbjct: 579 VQGLDELSSVACEMVRLIETASAPIFGVDSAGLINGWNAKIVELTGLQASEAIGKSLLND 638
Query: 659 LVAGDSVDVVKNMLSSAF 676
+V DS VV+N++ AF
Sbjct: 639 IVREDSRGVVENLMCRAF 656
>gi|283131687|dbj|BAI63250.1| phytochrome E [Pieris nana]
Length = 657
Score = 797 bits (2058), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/678 (59%), Positives = 499/678 (73%), Gaps = 30/678 (4%)
Query: 7 NKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPS 61
N N +R S A + NA DA L E+FD+S F+YS SV + T VP+
Sbjct: 1 NNPNNNRKSKAVALYNA--------DAGLLEEFDQSADSGKSFNYSRSVVNAPKT--VPA 50
Query: 62 STVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALT 121
++AYL R+QRG LIQPFGCM+A++E +F ++GYSEN +L L + V Q+ L
Sbjct: 51 EQITAYLSRIQRGGLIQPFGCMLAIEEPSFKIIGYSENCFNLLGLNLNNVFESNQERGL- 109
Query: 122 LGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEP 181
+GID RTLF+ S +L A E++LLNPI +H + + KPFYAILHRIDVG+VIDLEP
Sbjct: 110 IGIDARTLFSPSSGVSLVNAVGSKEISLLNPIWVHSRNTQKPFYAILHRIDVGIVIDLEP 169
Query: 182 VNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKF 241
V D ++ AGA++S KL +AISRLQSLP G+I +LCD +V +V LTGYDRVMVYKF
Sbjct: 170 VRSGDPALSLAGAVQSQKLVVRAISRLQSLPGGDIGVLCDRVVEDVQKLTGYDRVMVYKF 229
Query: 242 HEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDK 301
H+D+HGEVV+E R DLEPYLG HYPATDIPQA+RFL +N+VRMICDC + V+VI
Sbjct: 230 HDDDHGEVVSEIRSTDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCHSSQVRVIGTD 289
Query: 302 KLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLV 361
+L QPL L STLRAPHGCH +YM NMGSIASLV++V +N DND KLWGLV
Sbjct: 290 ELKQPLCLVNSTLRAPHGCHTQYMANMGSIASLVLAVVVN------DNDS---MKLWGLV 340
Query: 362 VCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSP 421
VCHHTSPR+VPFPLRYACEFL+Q FG+Q+ E++L++QL EK +LR QT+LCDM LRD+P
Sbjct: 341 VCHHTSPRYVPFPLRYACEFLMQAFGLQLYMELQLASQLVEKKVLRMQTLLCDMRLRDAP 400
Query: 422 VGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDS 481
GIVTQ+P++MDLVKCDGAAL+Y GK WLLGVTPT+ Q+KDIAEWLL+ H STGLSTDS
Sbjct: 401 FGIVTQSPSIMDLVKCDGAALFYCGKCWLLGVTPTKSQVKDIAEWLLKNHADSTGLSTDS 460
Query: 482 LVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMH 541
L +AGYP A LGDAVCG+ +ITSKDFLFWFRSHTAKE+KWGGA H KD G +M+
Sbjct: 461 LADAGYPSAALLGDAVCGMVTARITSKDFLFWFRSHTAKEVKWGGAMHHPEDKDDGGRMY 520
Query: 542 PRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDS--KMIVNVPSVDDR 599
PRSSF AFLEVVK RSLPWE E++AIHSLQLI+R S + + EDS K +V D +
Sbjct: 521 PRSSFNAFLEVVKSRSLPWEISEINAIHSLQLIMRDSYR--MIEDSGPKGLVYTQIHDSK 578
Query: 600 IEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-D 658
++ +DEL + EMVRLIETA+ PI VD++G +NGWN+K ELTGL +AIG +L+ D
Sbjct: 579 VQGLDELSSVACEMVRLIETASAPIFGVDSAGLINGWNAKIVELTGLQASEAIGKSLLND 638
Query: 659 LVAGDSVDVVKNMLSSAF 676
+V DS VV+N++ AF
Sbjct: 639 IVREDSRGVVENLMCRAF 656
>gi|186478305|ref|NP_001117256.1| phytochrome A [Arabidopsis thaliana]
gi|332190342|gb|AEE28463.1| phytochrome A [Arabidopsis thaliana]
Length = 1014
Score = 796 bits (2055), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/577 (65%), Positives = 463/577 (80%), Gaps = 6/577 (1%)
Query: 106 LAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFY 165
+A HAVP++ + L +G D+R+LFT+ A+ALQKA FG+V+LLNPIL+HC+TS KPFY
Sbjct: 1 MASHAVPSVGEHPVLGIGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCRTSAKPFY 60
Query: 166 AILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVN 225
AI+HR+ ++ID EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V
Sbjct: 61 AIIHRVTGSIIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQ 120
Query: 226 EVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVR 285
EV +LTGYDRVM YKFHED+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVR
Sbjct: 121 EVFELTGYDRVMAYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVR 180
Query: 286 MICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAED 345
MI DC A +V+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE +
Sbjct: 181 MIVDCNAKHARVLQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDG 240
Query: 346 ELD----NDQEQGRK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQL 400
E D Q Q RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+
Sbjct: 241 EGDAPDATTQPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELDNQM 300
Query: 401 REKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQI 460
EK+ILRTQT+LCDML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG TP+E +
Sbjct: 301 VEKNILRTQTLLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHL 360
Query: 461 KDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAK 520
++IA WL EYH STGLSTDSL +AG+P AL+LGD+VCG+AAV+I+SKD +FWFRSHTA
Sbjct: 361 QEIASWLCEYHMDSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAG 420
Query: 521 EIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQ 580
E++WGGAKHD +D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +
Sbjct: 421 EVRWGGAKHDPDDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFK 480
Query: 581 DEVAEDSKMIVNVPSVDD-RIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSK 639
D D V ++D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K
Sbjct: 481 DSETTDVNTKVIYSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTK 540
Query: 640 AAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
AELTGL+VD+AIG + LV SV++VK ML +A
Sbjct: 541 IAELTGLSVDEAIGKHFLTLVEDSSVEIVKRMLENAL 577
>gi|283131671|dbj|BAI63242.1| phytochrome E [Pieris nana]
Length = 657
Score = 796 bits (2055), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/678 (59%), Positives = 499/678 (73%), Gaps = 30/678 (4%)
Query: 7 NKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPS 61
N N +R S A + NA DA L ++FD+S F+YS SV + T VP+
Sbjct: 1 NNPNNNRKSKAVALYNA--------DAGLLDEFDQSADSGKSFNYSRSVVNAPKT--VPA 50
Query: 62 STVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALT 121
++AYL R+QRG LIQPFGCM+A++E NF ++GYSEN +L L + V Q+ L
Sbjct: 51 EQITAYLSRIQRGGLIQPFGCMLAIEEPNFKIIGYSENCFNLLGLNLNNVFESNQERGL- 109
Query: 122 LGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEP 181
+GID RTLF+ S +L A E++LLNPI +H + + KPFYAILHRIDVG+VIDLEP
Sbjct: 110 IGIDARTLFSPSSGVSLVNAVGSKEISLLNPIWVHSRNTQKPFYAILHRIDVGIVIDLEP 169
Query: 182 VNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKF 241
V D ++ AGA++S KL +AISRLQSLP G+I +LCD +V +V LTGYDRVMVYKF
Sbjct: 170 VRSGDPALSLAGAVQSQKLVVRAISRLQSLPGGDIGVLCDRVVEDVQKLTGYDRVMVYKF 229
Query: 242 HEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDK 301
H+D+HGEVV+E R DLEPYLG HYPATDIPQA+RFL +N+VRMICDC + V+VI
Sbjct: 230 HDDDHGEVVSEIRSTDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCHSSQVRVIGTD 289
Query: 302 KLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLV 361
+L QPL L STLRAPHGCH +YM NMGSIASLV++V +N +ND KLWGLV
Sbjct: 290 ELKQPLCLVNSTLRAPHGCHTQYMANMGSIASLVLAVVVN------NNDS---MKLWGLV 340
Query: 362 VCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSP 421
VCHHTSPR+VPFPLRYACEFL+Q FG+Q+ E++L++QL EK +LR QT+LCDM LRD+P
Sbjct: 341 VCHHTSPRYVPFPLRYACEFLMQAFGLQLYMELQLASQLVEKKVLRMQTLLCDMRLRDAP 400
Query: 422 VGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDS 481
GIVTQ+P++MDLVKCDGAAL+Y GK WLLGVTPT+ Q+KDIAEWLL+ H STGLSTDS
Sbjct: 401 FGIVTQSPSIMDLVKCDGAALFYCGKCWLLGVTPTKSQVKDIAEWLLKNHADSTGLSTDS 460
Query: 482 LVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMH 541
L +AGYP A LGDAVCG+ +ITSKDFLFWFRSHTAKE+KWGGA H KD G +M+
Sbjct: 461 LADAGYPSAALLGDAVCGMVTARITSKDFLFWFRSHTAKEVKWGGAMHHPEDKDDGGRMY 520
Query: 542 PRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDS--KMIVNVPSVDDR 599
PRSSF AFLEVVK RSLPWE E++AIHSLQLI+R S + + EDS K +V D +
Sbjct: 521 PRSSFNAFLEVVKSRSLPWEISEINAIHSLQLIMRDSYR--MIEDSGPKGLVYTQIHDSK 578
Query: 600 IEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-D 658
++ +DEL + EMVRLIETA+ PI VD++G +NGWN+K ELTGL +AIG +L+ D
Sbjct: 579 VQGLDELSSVACEMVRLIETASAPIFGVDSAGLINGWNAKIVELTGLQASEAIGKSLLND 638
Query: 659 LVAGDSVDVVKNMLSSAF 676
+V DS VV+N++ AF
Sbjct: 639 IVREDSRGVVENLMCRAF 656
>gi|283131701|dbj|BAI63257.1| phytochrome E [Pieris nana]
Length = 657
Score = 796 bits (2055), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/678 (59%), Positives = 500/678 (73%), Gaps = 30/678 (4%)
Query: 7 NKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPS 61
N N +R S A + NA DA L ++FD+S F+YS SV + T VP+
Sbjct: 1 NNPNNNRKSKAVALYNA--------DAGLLDEFDQSADSGKSFNYSRSVVNAPKT--VPA 50
Query: 62 STVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALT 121
++AYL R+QRG LIQPFGCM+A++E +F ++GYSEN +L L + V Q+ L
Sbjct: 51 EQITAYLSRIQRGGLIQPFGCMLAIEEPSFKIIGYSENCFNLLGLNLNNVFESNQERGL- 109
Query: 122 LGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEP 181
+GID RTLF+ S +L A E++LLNPI +H + + KPFYAILHRIDVG+VIDLEP
Sbjct: 110 IGIDARTLFSPSSGVSLVNAVGSKEISLLNPIWVHSRNTQKPFYAILHRIDVGIVIDLEP 169
Query: 182 VNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKF 241
V D ++ AGA++S KL +AISRLQSLP G+I +LCD +V +V LTGYDRVMVYKF
Sbjct: 170 VRSGDPALSLAGAVQSQKLVVRAISRLQSLPGGDIGVLCDRVVEDVQKLTGYDRVMVYKF 229
Query: 242 HEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDK 301
H+D+HGEVV+E R DLEPYLG HYPATDIPQA+RFL +N+VRMICDC + V+VI
Sbjct: 230 HDDDHGEVVSEIRSTDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCHSSQVRVIGTD 289
Query: 302 KLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLV 361
+L QPL L STLRAPHGCH +YM NMGSIASLV++V +N +ND KLWGLV
Sbjct: 290 ELKQPLCLVNSTLRAPHGCHTQYMANMGSIASLVLAVVVN------NNDS---MKLWGLV 340
Query: 362 VCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSP 421
VCHHTSPR+VPFPLRYACEFL+Q FG+Q+ E++L++QL EK +LR QT+LCDM LRD+P
Sbjct: 341 VCHHTSPRYVPFPLRYACEFLMQAFGLQLYMELQLASQLVEKKVLRMQTLLCDMRLRDAP 400
Query: 422 VGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDS 481
GIVTQ+P++MDLVKCDGAAL+Y GK WLLGVTPT+ Q+KDIAEWLL+ H STGLSTDS
Sbjct: 401 FGIVTQSPSIMDLVKCDGAALFYCGKCWLLGVTPTKSQVKDIAEWLLKNHADSTGLSTDS 460
Query: 482 LVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMH 541
L +AGYP A LGDAVCG+A +ITSKDFLFWFRSHTAKE+KWGGA H KD G +M+
Sbjct: 461 LADAGYPSAALLGDAVCGMATARITSKDFLFWFRSHTAKEVKWGGAMHHPEDKDDGGRMY 520
Query: 542 PRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDS--KMIVNVPSVDDR 599
PRSSF AFLEVVK RSLPWE E++AIHSLQLI+R S + + EDS K +V D +
Sbjct: 521 PRSSFNAFLEVVKSRSLPWEISEINAIHSLQLIMRDSYR--MIEDSGPKGLVYTQIHDSK 578
Query: 600 IEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-D 658
++ +DEL + EMVRLIETA+ PI VD++G +NGWN+K ELTGL +AIG +L+ D
Sbjct: 579 VQGLDELSSVACEMVRLIETASAPIFGVDSAGLINGWNAKIVELTGLQASEAIGKSLLND 638
Query: 659 LVAGDSVDVVKNMLSSAF 676
+V DS VV+N++ AF
Sbjct: 639 IVREDSRGVVENLMCRAF 656
>gi|283131689|dbj|BAI63251.1| phytochrome E [Pieris nana]
gi|283131707|dbj|BAI63260.1| phytochrome E [Pieris japonica]
Length = 657
Score = 796 bits (2055), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/678 (59%), Positives = 500/678 (73%), Gaps = 30/678 (4%)
Query: 7 NKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPS 61
N N +R S A + NA DA L ++FD+S F+YS SV + T VP+
Sbjct: 1 NNPNNNRKSKAVALYNA--------DAGLLDEFDQSADSGKSFNYSRSVVNAPKT--VPA 50
Query: 62 STVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALT 121
++AYL R+QRG LIQPFGCM+A++E +F ++GYSEN +L L + V Q+ L
Sbjct: 51 EQITAYLSRIQRGGLIQPFGCMLAIEEPSFKIIGYSENCFNLLGLNLNNVFESNQERGL- 109
Query: 122 LGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEP 181
+GIDVRTLF+ S +L A E++LLNPI +H + + KPFYAILHRIDVG+VIDLEP
Sbjct: 110 IGIDVRTLFSPSSGVSLVNAVGSKEISLLNPIWVHSRNTQKPFYAILHRIDVGIVIDLEP 169
Query: 182 VNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKF 241
D ++ AGA++S KL +AISRLQSLP G+I +LCD +V +V LTGYDRVMVYKF
Sbjct: 170 ARSGDPALSLAGAVQSQKLVVRAISRLQSLPGGDIGVLCDRVVEDVQKLTGYDRVMVYKF 229
Query: 242 HEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDK 301
H+D+HGEVV+E R DLEPYLG HYPATDIPQA+RFL +N+VRMICDC + V+VI
Sbjct: 230 HDDDHGEVVSEIRSTDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCHSSQVRVIGTD 289
Query: 302 KLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLV 361
+L QPL L STLRAPHGCH +YM NMGSIASLV++V +N +ND KLWGLV
Sbjct: 290 ELKQPLCLVNSTLRAPHGCHTQYMANMGSIASLVLAVVVN------NNDS---MKLWGLV 340
Query: 362 VCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSP 421
VCHHTSPR+VPFPLRYACEFL+Q FG+Q+ E++L++QL EK +LR QT+LCDM LRD+P
Sbjct: 341 VCHHTSPRYVPFPLRYACEFLMQAFGLQLYMELQLASQLVEKKVLRMQTLLCDMRLRDAP 400
Query: 422 VGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDS 481
GIVTQ+P++MDLVKCDGAAL+Y GK WLLGVTPT+ Q+KDIAEWLL+ H STGLSTDS
Sbjct: 401 FGIVTQSPSIMDLVKCDGAALFYCGKCWLLGVTPTKSQVKDIAEWLLKNHADSTGLSTDS 460
Query: 482 LVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMH 541
L +AGYP A LGDAVCG+A +ITSKDFLFWFRSHTAKE+KWGGA H KD G +M+
Sbjct: 461 LADAGYPSAALLGDAVCGMATARITSKDFLFWFRSHTAKEVKWGGAMHHPEDKDDGGRMY 520
Query: 542 PRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDS--KMIVNVPSVDDR 599
PRSSF AFLEVVK RSLPWE E++AIHSLQLI+R S + + EDS K +V D +
Sbjct: 521 PRSSFNAFLEVVKSRSLPWEISEINAIHSLQLIMRDSYR--MIEDSGPKGLVYTQIHDSK 578
Query: 600 IEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-D 658
++ +DEL + EMVRLIETA+ PI VD++G +NGWN+K ELTGL +AIG +L+ D
Sbjct: 579 VQGLDELSSVACEMVRLIETASAPIFGVDSAGLINGWNAKIVELTGLQASEAIGKSLLND 638
Query: 659 LVAGDSVDVVKNMLSSAF 676
+V DS VV+N++ AF
Sbjct: 639 IVREDSRGVVENLMCRAF 656
>gi|283131691|dbj|BAI63252.1| phytochrome E [Pieris nana]
Length = 657
Score = 795 bits (2054), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/678 (59%), Positives = 498/678 (73%), Gaps = 30/678 (4%)
Query: 7 NKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPS 61
N N +R S A + NA DA L E+FD+S F+YS SV + T VP+
Sbjct: 1 NNPNNNRKSKAVALYNA--------DAGLLEEFDQSADSGKSFNYSRSVVNAPKT--VPA 50
Query: 62 STVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALT 121
++AYL R+QRG LIQPFGCM+A++E +F ++GYSEN +L L + V Q+ L
Sbjct: 51 EQITAYLSRIQRGGLIQPFGCMLAIEEPSFKIIGYSENCFNLLGLNLNNVFESNQERGL- 109
Query: 122 LGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEP 181
+GID RTLF+ S +L A E++LLNPI +H + + KPFYAILHRIDVG+VIDLEP
Sbjct: 110 IGIDARTLFSPSSGVSLVNAVGSKEISLLNPIWVHSRNTQKPFYAILHRIDVGIVIDLEP 169
Query: 182 VNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKF 241
D ++ AGA++S KL +AISRLQSLP G+I +LCD +V +V LTGYDRVMVYKF
Sbjct: 170 ARSGDPALSLAGAVQSQKLVVRAISRLQSLPGGDIGVLCDRVVEDVQKLTGYDRVMVYKF 229
Query: 242 HEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDK 301
H+D+HGEVV+E R DLEPYLG HYPATDIPQA+RFL +N+VRMICDC + V+VI
Sbjct: 230 HDDDHGEVVSEIRSTDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCHSSQVRVIGTD 289
Query: 302 KLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLV 361
+L QPL L STLRAPHGCH +YM NMGSIASLV++V +N DND KLWGLV
Sbjct: 290 ELKQPLCLVNSTLRAPHGCHTQYMANMGSIASLVLAVVVN------DNDS---MKLWGLV 340
Query: 362 VCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSP 421
VCHHTSPR+VPFPLRYACEFL+Q FG+Q+ E++L++QL EK +LR QT+LCDM LRD+P
Sbjct: 341 VCHHTSPRYVPFPLRYACEFLMQAFGLQLYMELQLASQLVEKKVLRMQTLLCDMRLRDAP 400
Query: 422 VGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDS 481
GIVTQ+P++MDLVKCDGAAL+Y GK WLLGVTPT+ Q+KDIAEWLL+ H STGLSTDS
Sbjct: 401 FGIVTQSPSIMDLVKCDGAALFYCGKCWLLGVTPTKSQVKDIAEWLLKNHADSTGLSTDS 460
Query: 482 LVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMH 541
L +AGYP A LGDAVCG+A +ITSKDFLFWFRSHTAKE+KWGGA H KD G +M+
Sbjct: 461 LADAGYPSAALLGDAVCGMATARITSKDFLFWFRSHTAKEVKWGGAMHHPEDKDDGGRMY 520
Query: 542 PRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDS--KMIVNVPSVDDR 599
PRSSF FLEVVK RSLPWE E++AIHSLQLI+R S + + EDS K +V D +
Sbjct: 521 PRSSFNTFLEVVKSRSLPWEISEINAIHSLQLIMRDSYR--MIEDSGPKGLVYTQIHDSK 578
Query: 600 IEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-D 658
++ +DEL + EMVRLIETA+ PI VD++G +NGWN+K ELTGL +AIG +L+ D
Sbjct: 579 VQGLDELSSVACEMVRLIETASAPIFGVDSAGLINGWNAKIVELTGLQASEAIGKSLLND 638
Query: 659 LVAGDSVDVVKNMLSSAF 676
+V DS VV+N++ AF
Sbjct: 639 IVREDSRGVVENLMCRAF 656
>gi|283131709|dbj|BAI63241.1| phytochrome E [Pieris nana]
Length = 657
Score = 795 bits (2052), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/678 (58%), Positives = 499/678 (73%), Gaps = 30/678 (4%)
Query: 7 NKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPS 61
N N +R S A + NA DA L ++FD+S F+YS SV + T VP+
Sbjct: 1 NNPNNNRKSKAVALYNA--------DAGLLDEFDQSADSGKSFNYSRSVVNAPKT--VPA 50
Query: 62 STVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALT 121
++AYL R+QRG LIQPFGCM+A++E +F ++GYSEN +L L + V Q+ L
Sbjct: 51 EQITAYLSRIQRGGLIQPFGCMLAIEEPSFKIIGYSENCFNLLGLNLNNVFESNQERGL- 109
Query: 122 LGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEP 181
+GID RTLF+ S +L A E++LLNPI +H + + KPFYAILHRIDVG+VIDLEP
Sbjct: 110 IGIDARTLFSPSSGVSLVNAVGSKEISLLNPIWVHSRNTQKPFYAILHRIDVGIVIDLEP 169
Query: 182 VNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKF 241
D ++ AGA++S KL +AISRLQSLP G+I +LCD +V +V LTGYDRVMVYKF
Sbjct: 170 ARSGDPALSLAGAVQSQKLVVRAISRLQSLPGGDIGVLCDRVVEDVQKLTGYDRVMVYKF 229
Query: 242 HEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDK 301
H+D+HGEVV+E R DLEPYLG HYPATDIPQA+RFL +N+VRMICDC + V+VI
Sbjct: 230 HDDDHGEVVSEIRSTDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCHSSQVRVIGTD 289
Query: 302 KLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLV 361
+L QPL L STLRAPHGCH +YM NMGSIASLV++V +N +ND KLWGLV
Sbjct: 290 ELKQPLCLVNSTLRAPHGCHTQYMANMGSIASLVLAVVVN------NNDS---MKLWGLV 340
Query: 362 VCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSP 421
VCHHTSPR+VPFPLRYACEFL+Q FG+Q+ E++L++QL EK +LR QT+LCDM LRD+P
Sbjct: 341 VCHHTSPRYVPFPLRYACEFLMQAFGLQLYMELQLASQLVEKKVLRMQTLLCDMRLRDAP 400
Query: 422 VGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDS 481
GIVTQ+P++MDLVKCDGAAL+Y GK WLLGVTPT+ Q+KDIAEWLL+ H STGLSTDS
Sbjct: 401 FGIVTQSPSIMDLVKCDGAALFYCGKCWLLGVTPTKSQVKDIAEWLLKNHADSTGLSTDS 460
Query: 482 LVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMH 541
L +AGYP A LGDAVCG+A +ITSKDFLFWFRSHTAKE+KWGGA H KD G +M+
Sbjct: 461 LADAGYPSAALLGDAVCGMATARITSKDFLFWFRSHTAKEVKWGGAMHHPEDKDDGGRMY 520
Query: 542 PRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDS--KMIVNVPSVDDR 599
PRSSF AFLEVVK RSLPWE E++AIHSLQLI+R S + + EDS K +V D +
Sbjct: 521 PRSSFNAFLEVVKSRSLPWEISEINAIHSLQLIMRDSYR--MIEDSGPKGLVYTQIHDSK 578
Query: 600 IEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-D 658
++ +DEL + EMVRLIETA+ PI VD++G +NGWN+K ELTGL +AIG +L+ D
Sbjct: 579 VQGLDELSSVACEMVRLIETASAPIFGVDSAGLINGWNAKIVELTGLQASEAIGKSLLND 638
Query: 659 LVAGDSVDVVKNMLSSAF 676
+V DS VV+N++ AF
Sbjct: 639 IVREDSCGVVENLMCRAF 656
>gi|283131755|dbj|BAI63239.1| phytochrome E [Pieris nana]
Length = 657
Score = 795 bits (2052), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/678 (58%), Positives = 499/678 (73%), Gaps = 30/678 (4%)
Query: 7 NKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPS 61
N N +R S A + NA DA L ++FD+S F+YS SV + T VP+
Sbjct: 1 NNPNNNRKSKAVALYNA--------DAGLLDEFDQSADSGKSFNYSRSVVNAPKT--VPA 50
Query: 62 STVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALT 121
++AYL R+QRG LIQPFGCM+A++E +F ++GYSEN +L L + V Q+ L
Sbjct: 51 EQITAYLSRIQRGGLIQPFGCMLAIEEPSFKIIGYSENCFNLLGLNLNNVFESNQERGL- 109
Query: 122 LGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEP 181
+GID RTLF+ S +L A E++LLNPI +H + + KPFYAILHRIDVG+VIDLEP
Sbjct: 110 IGIDARTLFSPSSGVSLVNAVGSKEISLLNPIWVHSRNTQKPFYAILHRIDVGIVIDLEP 169
Query: 182 VNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKF 241
D ++ AGA++S KL +AISRLQSLP G+I +LCD +V +V LTGYDRVMVYKF
Sbjct: 170 ARSGDPALSLAGAVQSQKLVVRAISRLQSLPRGDIGVLCDRVVEDVQKLTGYDRVMVYKF 229
Query: 242 HEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDK 301
H+D+HGEVV+E R DLEPYLG HYPATDIPQA+RFL +N+VRMICDC + V+VI
Sbjct: 230 HDDDHGEVVSEIRSTDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCHSSQVRVIGTD 289
Query: 302 KLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLV 361
+L QPL L STLRAPHGCH +YM NMGSIASLV++V +N +ND KLWGLV
Sbjct: 290 ELKQPLCLVNSTLRAPHGCHTQYMANMGSIASLVLAVVVN------NNDS---MKLWGLV 340
Query: 362 VCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSP 421
VCHHTSPR+VPFPLRYACEFL+Q FG+Q+ E++L++QL EK +LR QT+LCDM LRD+P
Sbjct: 341 VCHHTSPRYVPFPLRYACEFLMQAFGLQLYMELQLASQLVEKKVLRMQTLLCDMRLRDAP 400
Query: 422 VGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDS 481
GIVTQ+P++MDLVKCDGAAL+Y GK WLLGVTPT+ Q+KDIAEWLL+ H STGLSTDS
Sbjct: 401 FGIVTQSPSIMDLVKCDGAALFYCGKCWLLGVTPTKSQVKDIAEWLLKNHADSTGLSTDS 460
Query: 482 LVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMH 541
L +AGYP A LGDAVCG+A +ITSKDFLFWFRSHTAKE+KWGGA H KD G +M+
Sbjct: 461 LADAGYPSAALLGDAVCGMATARITSKDFLFWFRSHTAKEVKWGGAMHHPEDKDDGGRMY 520
Query: 542 PRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDS--KMIVNVPSVDDR 599
PRSSF AFLEVVK RSLPWE E++AIHSLQLI+R S + + EDS K +V D +
Sbjct: 521 PRSSFNAFLEVVKSRSLPWEISEINAIHSLQLIMRDSYR--MIEDSGPKGLVYTQIHDSK 578
Query: 600 IEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-D 658
++ +DEL + EMVRLIETA+ PI VD++G +NGWN+K ELTGL +AIG +L+ D
Sbjct: 579 VQGLDELSSVACEMVRLIETASAPIFGVDSAGLINGWNAKIVELTGLQASEAIGKSLLND 638
Query: 659 LVAGDSVDVVKNMLSSAF 676
+V DS VV+N++ AF
Sbjct: 639 IVREDSCGVVENLMCRAF 656
>gi|283131681|dbj|BAI63247.1| phytochrome E [Pieris nana]
gi|283131757|dbj|BAI63238.1| phytochrome E [Pieris nana]
Length = 657
Score = 795 bits (2052), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/678 (58%), Positives = 499/678 (73%), Gaps = 30/678 (4%)
Query: 7 NKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPS 61
N N +R S A + NA DA L ++FD+S F+YS SV + T VP+
Sbjct: 1 NNPNNNRKSKAVALYNA--------DAGLLDEFDQSADSGKSFNYSRSVVNAPKT--VPA 50
Query: 62 STVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALT 121
++AYL R+QRG LIQPFGCM+A++E +F ++GYSEN +L L + V Q+ L
Sbjct: 51 EQITAYLSRIQRGGLIQPFGCMLAIEEPSFKIIGYSENCFNLLGLNLNNVFESNQERGL- 109
Query: 122 LGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEP 181
+GID RTLF+ S +L A E++LLNPI +H + + KPFYAILHRIDVG+VIDLEP
Sbjct: 110 IGIDARTLFSPSSGVSLVNAVGSKEISLLNPIWVHSRNTQKPFYAILHRIDVGIVIDLEP 169
Query: 182 VNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKF 241
D ++ AGA++S KL +AISRLQSLP G+I +LCD +V +V LTGYDRVMVYKF
Sbjct: 170 ARSGDPALSLAGAVQSQKLVVRAISRLQSLPGGDIGVLCDRVVEDVQKLTGYDRVMVYKF 229
Query: 242 HEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDK 301
H+D+HGEVV+E R DLEPYLG HYPATDIPQA+RFL +N+VRMICDC + V+VI
Sbjct: 230 HDDDHGEVVSEIRSTDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCHSSQVRVIGTD 289
Query: 302 KLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLV 361
+L QPL L STLRAPHGCH +YM NMGSIASLV++V +N +ND KLWGLV
Sbjct: 290 ELKQPLCLVNSTLRAPHGCHTQYMANMGSIASLVLAVVVN------NNDS---MKLWGLV 340
Query: 362 VCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSP 421
VCHHTSPR+VPFPLRYACEFL+Q FG+Q+ E++L++QL EK +LR QT+LCDM LRD+P
Sbjct: 341 VCHHTSPRYVPFPLRYACEFLMQAFGLQLYMELQLASQLVEKKVLRMQTLLCDMRLRDAP 400
Query: 422 VGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDS 481
GIVTQ+P++MDLVKCDGAAL+Y GK WLLGVTPT+ Q+KDIAEWLL+ H STGLSTDS
Sbjct: 401 FGIVTQSPSIMDLVKCDGAALFYCGKCWLLGVTPTKSQVKDIAEWLLKNHADSTGLSTDS 460
Query: 482 LVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMH 541
L +AGYP A LGDAVCG+A +ITSKDFLFWFRSHTAKE+KWGGA H KD G +M+
Sbjct: 461 LADAGYPSAALLGDAVCGMATARITSKDFLFWFRSHTAKEVKWGGAMHHPEDKDDGGRMY 520
Query: 542 PRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDS--KMIVNVPSVDDR 599
PRSSF AFLEVVK RSLPWE E++AIHSLQLI+R S + + EDS K +V D +
Sbjct: 521 PRSSFNAFLEVVKSRSLPWEISEINAIHSLQLIMRDSYR--MIEDSGPKGLVYTQIHDSK 578
Query: 600 IEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-D 658
++ +DEL + EMVRLIETA+ PI VD++G +NGWN+K ELTGL +AIG +L+ D
Sbjct: 579 VQGLDELSSVACEMVRLIETASAPIFGVDSAGLINGWNAKIVELTGLQASEAIGKSLLND 638
Query: 659 LVAGDSVDVVKNMLSSAF 676
+V DS VV+N++ AF
Sbjct: 639 IVREDSRGVVENLMCRAF 656
>gi|283131761|dbj|BAI63236.1| phytochrome E [Pieris nana]
Length = 657
Score = 794 bits (2051), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/678 (58%), Positives = 499/678 (73%), Gaps = 30/678 (4%)
Query: 7 NKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPS 61
N N +R S A + NA DA L ++FD+S F+YS SV + T VP+
Sbjct: 1 NNPNNNRKSKAVALYNA--------DAGLLDEFDQSADSGKSFNYSRSVVNAPKT--VPA 50
Query: 62 STVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALT 121
++AYL R+QRG LIQPFGCM+A++E +F ++GYSEN +L L + V Q+ L
Sbjct: 51 EQITAYLSRIQRGGLIQPFGCMLAIEEPSFKIIGYSENCFNLLGLNLNNVFESNQERGL- 109
Query: 122 LGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEP 181
+GID RTLF+ S +L A E++LLNPI +H + + KPFYAILHRIDVG+VIDLEP
Sbjct: 110 IGIDARTLFSPSSGVSLVNAVGSKEISLLNPIWVHSRNTQKPFYAILHRIDVGIVIDLEP 169
Query: 182 VNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKF 241
D ++ AGA++S KL +AISRLQSLP G+I +LCD +V +V LTGYDRVMVYKF
Sbjct: 170 ARSGDPALSLAGAVQSQKLVVRAISRLQSLPRGDIGVLCDRVVEDVQKLTGYDRVMVYKF 229
Query: 242 HEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDK 301
H+D+HGEVV+E R DLEPYLG HYPATDIPQA+RFL +N+VRMICDC + V+VI
Sbjct: 230 HDDDHGEVVSEIRSTDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCHSSQVRVIGTD 289
Query: 302 KLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLV 361
+L QPL L STLRAPHGCH +YM NMGSIASLV++V +N +ND KLWGLV
Sbjct: 290 ELKQPLCLVNSTLRAPHGCHTQYMANMGSIASLVLAVVVN------NNDS---MKLWGLV 340
Query: 362 VCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSP 421
VCHHTSPR+VPFPLRYACEFL+Q FG+Q+ E++L++QL EK +LR QT+LCDM LRD+P
Sbjct: 341 VCHHTSPRYVPFPLRYACEFLMQAFGLQLYMELQLASQLVEKKVLRMQTLLCDMRLRDAP 400
Query: 422 VGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDS 481
GIVTQ+P++MDLVKCDGAAL+Y GK WLLGVTPT+ Q+KDIAEWLL+ H STGLSTDS
Sbjct: 401 FGIVTQSPSIMDLVKCDGAALFYCGKCWLLGVTPTKSQVKDIAEWLLKNHADSTGLSTDS 460
Query: 482 LVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMH 541
L +AGYP A LGDAVCG+A +ITSKDFLFWFRSHTAKE+KWGGA H KD G +M+
Sbjct: 461 LADAGYPSAALLGDAVCGMATARITSKDFLFWFRSHTAKEVKWGGAMHHPEDKDDGGRMY 520
Query: 542 PRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDS--KMIVNVPSVDDR 599
PRSSF AFLEVVK RSLPWE E++AIHSLQLI+R S + + EDS K +V D +
Sbjct: 521 PRSSFNAFLEVVKSRSLPWEISEINAIHSLQLIMRDSYR--MIEDSGPKGLVYTQIHDSK 578
Query: 600 IEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-D 658
++ +DEL + EMVRLIETA+ PI VD++G +NGWN+K ELTGL +AIG +L+ D
Sbjct: 579 VQGLDELSSVACEMVRLIETASAPIFGVDSAGLINGWNAKIVELTGLQASEAIGKSLLND 638
Query: 659 LVAGDSVDVVKNMLSSAF 676
+V DS VV+N++ AF
Sbjct: 639 IVREDSRGVVENLMCRAF 656
>gi|283131677|dbj|BAI63245.1| phytochrome E [Pieris nana]
gi|283131773|dbj|BAI63230.1| phytochrome E [Pieris nana]
Length = 657
Score = 794 bits (2050), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/678 (58%), Positives = 499/678 (73%), Gaps = 30/678 (4%)
Query: 7 NKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPS 61
N N +R S A + NA DA L ++FD+S F+YS SV + T VP+
Sbjct: 1 NNPNNNRKSKAVALYNA--------DAGLLDEFDQSADSGKSFNYSRSVVNAPKT--VPA 50
Query: 62 STVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALT 121
++AYL R+QRG LIQPFGCM+A++E +F ++GYSEN +L L + V Q+ L
Sbjct: 51 EQITAYLSRIQRGGLIQPFGCMLAIEEPSFKIIGYSENCFNLLGLNLNNVFESNQERGL- 109
Query: 122 LGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEP 181
+GID RTLF+ S +L A E++LLNPI +H + + KPFYAILHRIDVG+VIDLEP
Sbjct: 110 IGIDARTLFSLSSGVSLVNAVGSKEISLLNPIWVHSRNTQKPFYAILHRIDVGIVIDLEP 169
Query: 182 VNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKF 241
D ++ AGA++S KL +AISRLQSLP G+I +LCD +V +V LTGYDRVMVYKF
Sbjct: 170 ARSGDPALSLAGAVQSQKLVVRAISRLQSLPGGDIGVLCDRVVEDVQKLTGYDRVMVYKF 229
Query: 242 HEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDK 301
H+D+HGEVV+E R DLEPYLG HYPATDIPQA+RFL +N+VRMICDC + V+VI
Sbjct: 230 HDDDHGEVVSEIRSTDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCHSSQVRVIGTD 289
Query: 302 KLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLV 361
+L QPL L STLRAPHGCH +YM NMGSIASLV++V +N +ND KLWGLV
Sbjct: 290 ELKQPLCLVNSTLRAPHGCHTQYMANMGSIASLVLAVVVN------NNDS---MKLWGLV 340
Query: 362 VCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSP 421
VCHHTSPR+VPFPLRYACEFL+Q FG+Q+ E++L++QL EK +LR QT+LCDM LRD+P
Sbjct: 341 VCHHTSPRYVPFPLRYACEFLMQAFGLQLYMELQLASQLVEKKVLRMQTLLCDMRLRDAP 400
Query: 422 VGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDS 481
GIVTQ+P++MDLVKCDGAAL+Y GK WLLGVTPT+ Q+KDIAEWLL+ H STGLSTDS
Sbjct: 401 FGIVTQSPSIMDLVKCDGAALFYCGKCWLLGVTPTKSQVKDIAEWLLKNHADSTGLSTDS 460
Query: 482 LVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMH 541
L +AGYP A LGDAVCG+A +ITSKDFLFWFRSHTAKE+KWGGA H KD G +M+
Sbjct: 461 LADAGYPSAALLGDAVCGMATARITSKDFLFWFRSHTAKEVKWGGAMHHPEDKDDGGRMY 520
Query: 542 PRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDS--KMIVNVPSVDDR 599
PRSSF AFLEVVK RSLPWE E++AIHSLQLI+R S + + EDS K +V D +
Sbjct: 521 PRSSFNAFLEVVKSRSLPWEISEINAIHSLQLIMRDSYR--MIEDSGPKGLVYTQIHDSK 578
Query: 600 IEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-D 658
++ +DEL + EMVRLIETA+ PI VD++G +NGWN+K ELTGL +AIG +L+ D
Sbjct: 579 VQGLDELSSVACEMVRLIETASAPIFGVDSAGLINGWNAKIVELTGLQASEAIGKSLLND 638
Query: 659 LVAGDSVDVVKNMLSSAF 676
+V DS VV+N++ AF
Sbjct: 639 IVREDSRGVVENLMCRAF 656
>gi|283131673|dbj|BAI63243.1| phytochrome E [Pieris nana]
gi|283131695|dbj|BAI63254.1| phytochrome E [Pieris nana]
Length = 657
Score = 794 bits (2050), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/678 (58%), Positives = 499/678 (73%), Gaps = 30/678 (4%)
Query: 7 NKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPS 61
N N +R S A + NA DA L ++FD+S F+YS SV + T VP+
Sbjct: 1 NNPNNNRKSKAVALYNA--------DAGLLDEFDQSADSGKSFNYSRSVVNAPKT--VPA 50
Query: 62 STVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALT 121
++AYL R+QRG LIQPFGCM+A++E +F ++GYSEN +L L + V Q+ L
Sbjct: 51 EQITAYLSRIQRGGLIQPFGCMLAIEEPSFKIIGYSENCFNLLGLNLNNVFESNQERGL- 109
Query: 122 LGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEP 181
+GID RTLF+ S +L A E++LLNPI +H + + KPFYAILHRIDVG+VIDLEP
Sbjct: 110 IGIDARTLFSPSSGVSLVNAVGSKEISLLNPIWVHSRNTQKPFYAILHRIDVGIVIDLEP 169
Query: 182 VNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKF 241
V D ++ AGA++S KL +AISRLQSLP G+I +LCD +V +V LTGYDRVMVYKF
Sbjct: 170 VRSGDPALSLAGAVQSQKLVVRAISRLQSLPGGDIGVLCDRVVEDVQKLTGYDRVMVYKF 229
Query: 242 HEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDK 301
H+D+HGEVV+E R DLEPYLG HYPATDIPQA+RFL +N+VRMICDC + V+VI
Sbjct: 230 HDDDHGEVVSEIRSTDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCHSSQVRVIGTD 289
Query: 302 KLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLV 361
+L QPL L STLRAPHGCH +YM NMGSIASLV++V +N +ND KLWGLV
Sbjct: 290 ELKQPLCLVNSTLRAPHGCHTQYMANMGSIASLVLAVVVN------NNDS---MKLWGLV 340
Query: 362 VCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSP 421
VCHHTSPR+VPFPLRYACEFL+Q FG+Q+ E++L++QL EK +LR QT+LCDM LRD+P
Sbjct: 341 VCHHTSPRYVPFPLRYACEFLMQAFGLQLYMELQLASQLVEKKVLRMQTLLCDMRLRDAP 400
Query: 422 VGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDS 481
GIVTQ+P++MDLVKCDGAAL+Y GK WLLGVTPT+ Q+KDIAEWLL+ H STGLSTDS
Sbjct: 401 FGIVTQSPSIMDLVKCDGAALFYCGKCWLLGVTPTKSQVKDIAEWLLKNHADSTGLSTDS 460
Query: 482 LVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMH 541
L +AGYP A LGDAVCG+ +ITSKDFLFWFRSHTAKE+KWGGA H KD G +M+
Sbjct: 461 LADAGYPSAALLGDAVCGMVTARITSKDFLFWFRSHTAKEVKWGGAMHHPEDKDDGGRMY 520
Query: 542 PRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDS--KMIVNVPSVDDR 599
PRSSF AFLEVVK RSLPWE E++AIHSLQLI+R S + + EDS K +V D +
Sbjct: 521 PRSSFNAFLEVVKSRSLPWEISEINAIHSLQLIMRDSYR--MIEDSGPKGLVYTQIHDSK 578
Query: 600 IEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-D 658
++ +DEL + EMVRLIETA+ PI VD++G +NGWN+K ELTGL +AIG +L+ D
Sbjct: 579 VQGLDELSSVACEMVRLIETASAPIFGVDSAGLINGWNAKIVELTGLQASEAIGKSLLND 638
Query: 659 LVAGDSVDVVKNMLSSAF 676
+V DS VV+N++ AF
Sbjct: 639 IVREDSRGVVENLMCRAF 656
>gi|283131759|dbj|BAI63237.1| phytochrome E [Pieris nana]
Length = 657
Score = 794 bits (2050), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/678 (58%), Positives = 499/678 (73%), Gaps = 30/678 (4%)
Query: 7 NKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPS 61
N N +R S A + NA DA L ++FD+S F+YS SV + T VP+
Sbjct: 1 NNPNNNRKSKAVALYNA--------DAGLLDEFDQSADSGKSFNYSRSVVNAPKT--VPA 50
Query: 62 STVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALT 121
++AYL R+QRG LIQPFGCM+A++E +F ++GYSEN +L L + V Q+ L
Sbjct: 51 EQITAYLSRIQRGGLIQPFGCMLAIEEPSFKIIGYSENCFNLLGLNLNNVFESNQERGL- 109
Query: 122 LGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEP 181
+GID RTLF+ S +L A E++LLNPI +H + + KPFYAILHRIDVG+VIDLEP
Sbjct: 110 IGIDARTLFSLSSGVSLVNAVGSKEISLLNPIWVHSRNTQKPFYAILHRIDVGIVIDLEP 169
Query: 182 VNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKF 241
D ++ AGA++S KL +AISRLQSLP G+I +LCD +V +V LTGYDRVMVYKF
Sbjct: 170 ARSGDPALSLAGAVQSQKLVVRAISRLQSLPRGDIGVLCDRVVEDVQKLTGYDRVMVYKF 229
Query: 242 HEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDK 301
H+D+HGEVV+E R DLEPYLG HYPATDIPQA+RFL +N+VRMICDC + V+VI
Sbjct: 230 HDDDHGEVVSEIRSTDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCHSSQVRVIGTD 289
Query: 302 KLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLV 361
+L QPL L STLRAPHGCH +YM NMGSIASLV++V +N +ND KLWGLV
Sbjct: 290 ELKQPLCLVNSTLRAPHGCHTQYMANMGSIASLVLAVVVN------NNDS---MKLWGLV 340
Query: 362 VCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSP 421
VCHHTSPR+VPFPLRYACEFL+Q FG+Q+ E++L++QL EK +LR QT+LCDM LRD+P
Sbjct: 341 VCHHTSPRYVPFPLRYACEFLMQAFGLQLYMELQLASQLVEKKVLRMQTLLCDMRLRDAP 400
Query: 422 VGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDS 481
GIVTQ+P++MDLVKCDGAAL+Y GK WLLGVTPT+ Q+KDIAEWLL+ H STGLSTDS
Sbjct: 401 FGIVTQSPSIMDLVKCDGAALFYCGKCWLLGVTPTKSQVKDIAEWLLKNHADSTGLSTDS 460
Query: 482 LVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMH 541
L +AGYP A LGDAVCG+A +ITSKDFLFWFRSHTAKE+KWGGA H KD G +M+
Sbjct: 461 LADAGYPSAALLGDAVCGMATARITSKDFLFWFRSHTAKEVKWGGAMHHPEDKDDGGRMY 520
Query: 542 PRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDS--KMIVNVPSVDDR 599
PRSSF AFLEVVK RSLPWE E++AIHSLQLI+R S + + EDS K +V D +
Sbjct: 521 PRSSFNAFLEVVKSRSLPWEISEINAIHSLQLIMRDSYR--MIEDSGPKGLVYTQIHDSK 578
Query: 600 IEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-D 658
++ +DEL + EMVRLIETA+ PI VD++G +NGWN+K ELTGL +AIG +L+ D
Sbjct: 579 VQGLDELSSVACEMVRLIETASAPIFGVDSAGLINGWNAKIVELTGLQASEAIGKSLLND 638
Query: 659 LVAGDSVDVVKNMLSSAF 676
+V DS VV+N++ AF
Sbjct: 639 IVREDSRGVVENLMCRAF 656
>gi|356556523|ref|XP_003546574.1| PREDICTED: phytochrome E-like [Glycine max]
Length = 1121
Score = 793 bits (2049), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/688 (58%), Positives = 493/688 (71%), Gaps = 27/688 (3%)
Query: 1 MSSKSTNK-TNYSRSSSARSKQNAR---VAAQTSIDAKLAEDFDES-----DFDYSTSVN 51
MS S K + S S+SA S N + + AQ S DA++ +F+ S FDYS V
Sbjct: 1 MSFGSRGKLKDTSLSTSAESNTNTKRDKILAQYSADAEILAEFELSGVSGKSFDYSRMVL 60
Query: 52 ISSSTSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAV 111
S V ++AYL ++QRG LIQPFGCM+A++E F ++GYS+N ++L L
Sbjct: 61 DPSRL--VSEQKMTAYLSKIQRGGLIQPFGCMLAIEESTFRIIGYSDNCFQLLGLERQ-- 116
Query: 112 PNIEQQDALTL-GIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHR 170
I+ + + L G+D TLFT A+L KAA E++LLNPI ++ +T+ KPFYAILHR
Sbjct: 117 --IDSKQFMNLIGVDATTLFTPPSGASLAKAAASREISLLNPIWVYARTTQKPFYAILHR 174
Query: 171 IDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDL 230
IDVG+VIDLEP D ++ AGA++S KLA +AISRLQSLP +I LLCD +V EV L
Sbjct: 175 IDVGVVIDLEPARMSDPTLSLAGAVQSQKLAVRAISRLQSLPGEDIGLLCDTVVEEVQKL 234
Query: 231 TGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRM-ICD 289
TGYDRVMVYKFHED+HGEVV+E RR DLEPYLG HYPATDIPQASRFL +N+VRM ICD
Sbjct: 235 TGYDRVMVYKFHEDDHGEVVSEIRRSDLEPYLGLHYPATDIPQASRFLFKQNRVRMMICD 294
Query: 290 CLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN 349
C A PVKVIQ ++L QPL L STLR PHGCH +YM NMGSIASLVM++ +N +
Sbjct: 295 CHAKPVKVIQSEELRQPLCLVNSTLRLPHGCHTQYMANMGSIASLVMAIIVNGKD----- 349
Query: 350 DQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQ 409
+LWGL+VCHHTSPR V F +RYACEFL+Q FG+Q+ E++L++Q+ EK IL+TQ
Sbjct: 350 ----ATRLWGLLVCHHTSPRSVSFLVRYACEFLMQTFGLQLYMEIQLASQMAEKRILKTQ 405
Query: 410 TVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLE 469
T+LCDMLLRD+P GIV Q+P++MDLVKCDGAALYY G WLLG TPTE Q+KDIAEWLL
Sbjct: 406 TLLCDMLLRDAPFGIVNQSPSIMDLVKCDGAALYYEGNCWLLGTTPTEAQVKDIAEWLLS 465
Query: 470 YHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKH 529
H STGL+TDSL +AGYPGA +LGDAVCG+A +I SK FLFWFRSHTAKE+KWGGAKH
Sbjct: 466 NHGDSTGLTTDSLADAGYPGAASLGDAVCGMATARINSKHFLFWFRSHTAKEVKWGGAKH 525
Query: 530 DSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKM 589
KD G KM+PRSSFKAFLEVVK +SLPWE +E++AIHSLQLI+R S QD K
Sbjct: 526 HPEDKDDGGKMNPRSSFKAFLEVVKSKSLPWEVLEINAIHSLQLIIRDSFQDTENTGPKT 585
Query: 590 IVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVD 649
+ V D +DEL + +MVRLIETA VPI VD G +NGWN+K AELTGL
Sbjct: 586 LSYVQKSDTAAGGMDELSSVALQMVRLIETATVPIFGVDLGGVINGWNTKIAELTGLQAS 645
Query: 650 QAIGTALV-DLVAGDSVDVVKNMLSSAF 676
+A+G +LV +++ DS D KN LS A
Sbjct: 646 EAMGKSLVNEIIHADSGDTFKNTLSRAL 673
>gi|327241206|gb|AEA40447.1| phytochrome A [Amblyopyrum muticum]
Length = 1130
Score = 793 bits (2048), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/672 (58%), Positives = 481/672 (71%), Gaps = 13/672 (1%)
Query: 18 RSKQNARVAAQTSIDAKLAEDFDESD--FDYSTSVNISSSTSNV----PSSTVSAYLQRV 71
R RV AQT++DA+L +F+ES+ FDYS V T V S AYLQ +
Sbjct: 15 RQSTQERVLAQTTLDAELNTEFEESNDSFDYSKLVEAQRDTPTVLQEGRSENAIAYLQHI 74
Query: 72 QRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFT 131
QRG+ +Q FGC++A+DE++F V+ +SENAPEML HAVP + L +G +V +LFT
Sbjct: 75 QRGKRLQSFGCLLALDEKSFNVVAFSENAPEMLTAVSHAVPGVVDPPRLDMGTNVWSLFT 134
Query: 132 SSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTA 191
GA AL KA F +V+LLNPIL+ CKTSGKPFYAI+HR V+D EPVNP + P T
Sbjct: 135 DQGATALHKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCFVVDFEPVNPTEFPATG 194
Query: 192 AGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVA 251
AGAL+ YKLAAKAIS++Q+LP G++ LLC+ +V EV L GYDRVM YKFHED HGEVVA
Sbjct: 195 AGALQPYKLAAKAISKIQALPGGSMELLCNTMVKEVFKLIGYDRVMAYKFHEDNHGEVVA 254
Query: 252 ECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCG 311
E +P LEPYLG HYPATDIPQA+R + MK KVRMICD +KVI+D+ L +SLCG
Sbjct: 255 EITKPGLEPYLGLHYPATDIPQAARCVFMKTKVRMICDVHTRSIKVIEDEALPFDISLCG 314
Query: 312 STLRAPHGCHARYMENMGSIASLVMSVTINEAE--DELDND----QEQGRKLWGLVVCHH 365
S LRA H CH +YMENM SIASL M+V +NE E DE+ ++ Q+Q + LWGLVVCHH
Sbjct: 315 SALRAAHNCHLQYMENMSSIASLTMAVVVNENEEDDEVGSEQPAQQQQKKILWGLVVCHH 374
Query: 366 TSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD-SPVGI 424
SPR+VPFPLRYACEFL QVF V VNKE E+ QL EK ILR QT+L ML ++ SP+ I
Sbjct: 375 ESPRYVPFPLRYACEFLAQVFAVHVNKEFEVQKQLHEKSILRMQTILSGMLFKEASPLTI 434
Query: 425 VTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVE 484
V+ PN+MDL+KCDGAAL Y KLW LG PTE QI+D+A WL E H S GLST+SL +
Sbjct: 435 VSGAPNIMDLIKCDGAALLYGDKLWHLGNAPTESQIRDLALWLSEVHMDSIGLSTESLHD 494
Query: 485 AGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRS 544
AGY GA ALGD VCG+A KI+S LFWFRSH A+EI+WGGAK+D +D R+MHPR
Sbjct: 495 AGYLGASALGDMVCGMAVAKISSNHILFWFRSHIAEEIRWGGAKNDPSDQDDSRRMHPRL 554
Query: 545 SFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKID 604
SFKAFLEVVK +SL W D EMDAIHSLQLILRG++ V K ++ D +++ +
Sbjct: 555 SFKAFLEVVKMKSLAWTDSEMDAIHSLQLILRGTVDGVVKPTGKASLDEQIGDLKLDGLA 614
Query: 605 ELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDS 664
EL+ +T+EMVRL+ETA VPILAVD +G VNGWN KAAELTGL VD AIG ++ LV S
Sbjct: 615 ELQAVTSEMVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHILTLVEESS 674
Query: 665 VDVVKNMLSSAF 676
V VV+ ML A
Sbjct: 675 VSVVQRMLYLAL 686
>gi|283131705|dbj|BAI63259.1| phytochrome E [Pieris nana]
Length = 657
Score = 793 bits (2048), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/678 (58%), Positives = 499/678 (73%), Gaps = 30/678 (4%)
Query: 7 NKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPS 61
N N +R S A + NA DA L ++FD+S F+YS SV + T VP+
Sbjct: 1 NNPNNNRKSKAVALYNA--------DAGLLDEFDQSADSGKSFNYSRSVVNAPKT--VPA 50
Query: 62 STVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALT 121
++AYL R+QRG LIQPFGCM+A++E +F ++GYSEN +L L + V Q+ L
Sbjct: 51 EQITAYLSRIQRGGLIQPFGCMLAIEEPSFKIIGYSENCFNLLGLNLNNVFESNQERGL- 109
Query: 122 LGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEP 181
+GID RTLF+ S +L A E++LLNPI +H + + KPFYAILHRIDVG+VIDLEP
Sbjct: 110 IGIDARTLFSPSSGVSLVNAVGSKEISLLNPIWVHSRNTQKPFYAILHRIDVGIVIDLEP 169
Query: 182 VNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKF 241
V D ++ AGA++S KL +AISRLQSLP G+I +LCD +V +V LTGYDRVMVYKF
Sbjct: 170 VRSGDPALSLAGAVQSQKLVVRAISRLQSLPGGDIGVLCDRVVEDVQKLTGYDRVMVYKF 229
Query: 242 HEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDK 301
H+D+HGEVV+E R DLEPYLG HYPATDIPQA+RFL +N+VRMICDC + V+VI
Sbjct: 230 HDDDHGEVVSEIRSTDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCHSSQVRVIGTD 289
Query: 302 KLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLV 361
+L QPL L STLRAPHGCH +YM NMGSIASLV++V +N +ND KLWGLV
Sbjct: 290 ELKQPLCLVNSTLRAPHGCHTQYMANMGSIASLVLAVVVN------NNDS---MKLWGLV 340
Query: 362 VCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSP 421
VCHHTSPR+VPFPLRYACEFL+Q FG+Q+ E++L++QL EK +LR QT+LCDM LRD+P
Sbjct: 341 VCHHTSPRYVPFPLRYACEFLMQAFGLQLYMELQLASQLVEKKVLRMQTLLCDMRLRDAP 400
Query: 422 VGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDS 481
GIV Q+P++MDLVKCDGAAL+Y GK WLLGVTPT+ Q+KDIAEWLL+ H STGLSTDS
Sbjct: 401 FGIVMQSPSIMDLVKCDGAALFYCGKCWLLGVTPTKSQVKDIAEWLLKNHADSTGLSTDS 460
Query: 482 LVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMH 541
L +AGYP A LGDAVCG+A +ITSKDFLFWFRSHTAKE+KWGGA H KD G +M+
Sbjct: 461 LADAGYPSAALLGDAVCGMATARITSKDFLFWFRSHTAKEVKWGGAMHHPEDKDDGGRMY 520
Query: 542 PRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDS--KMIVNVPSVDDR 599
PRSSF AFLEVVK RSLPWE E++AIHSLQLI+R S + + EDS K +V D +
Sbjct: 521 PRSSFNAFLEVVKSRSLPWEISEINAIHSLQLIMRDSYR--MIEDSGPKGLVYTQIHDSK 578
Query: 600 IEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-D 658
++ +DEL + EMVRLIETA+ PI VD++G +NGWN+K ELTGL +AIG +L+ D
Sbjct: 579 VQGLDELSSVACEMVRLIETASAPIFGVDSAGLINGWNAKIVELTGLQASEAIGKSLLND 638
Query: 659 LVAGDSVDVVKNMLSSAF 676
+V DS VV+N++ AF
Sbjct: 639 IVREDSRGVVENLMCRAF 656
>gi|283131683|dbj|BAI63248.1| phytochrome E [Pieris nana]
Length = 657
Score = 793 bits (2048), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/678 (59%), Positives = 499/678 (73%), Gaps = 30/678 (4%)
Query: 7 NKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPS 61
N N +R S A + NA DA L ++FD+S F+YS SV + T VP+
Sbjct: 1 NNPNNNRKSKAVALYNA--------DAGLLDEFDQSADSGKSFNYSRSVVNAPKT--VPA 50
Query: 62 STVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALT 121
++AYL R+QRG LIQPFGCM+A++E +F ++GYSEN +L L + V Q+ L
Sbjct: 51 EQITAYLSRIQRGGLIQPFGCMLAIEEPSFKIIGYSENCFNLLGLNLNNVFESNQERGL- 109
Query: 122 LGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEP 181
+GIDVRTLF+ S +L A E++LLNPI +H + + KPFYAILHRIDVG+VIDLEP
Sbjct: 110 IGIDVRTLFSPSSGVSLVNAVGSKEISLLNPIWVHSRNTQKPFYAILHRIDVGIVIDLEP 169
Query: 182 VNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKF 241
D ++ AGA++S KL +AISRLQSLP G+I +LCD +V +V LTGYDRVMVYKF
Sbjct: 170 ARSGDPALSLAGAVQSQKLVVRAISRLQSLPGGDIGVLCDRVVEDVQKLTGYDRVMVYKF 229
Query: 242 HEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDK 301
H+D+HGEVV+E R DLEPYLG HYPATDI QA+RFL +N+VRMICDC + V+VI
Sbjct: 230 HDDDHGEVVSEIRSTDLEPYLGLHYPATDILQAARFLFKQNRVRMICDCHSSQVRVIGTD 289
Query: 302 KLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLV 361
+L QPL L STLRAPHGCH +YM NMGSIASLV++V +N DND KLWGLV
Sbjct: 290 ELKQPLCLVNSTLRAPHGCHTQYMANMGSIASLVLAVVVN------DNDS---MKLWGLV 340
Query: 362 VCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSP 421
VCHHTSPR+VPFPLRYACEFL+Q FG+Q+ E++L++QL EK +LR QT+LCDM LRD+P
Sbjct: 341 VCHHTSPRYVPFPLRYACEFLMQAFGLQLYMELQLASQLVEKKVLRMQTLLCDMRLRDAP 400
Query: 422 VGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDS 481
GIVTQ+P++MDLVKCDGAAL+Y GK WLLGVTPT+ Q+KDIAEWLL+ H STGLSTDS
Sbjct: 401 FGIVTQSPSIMDLVKCDGAALFYCGKCWLLGVTPTKSQVKDIAEWLLKNHADSTGLSTDS 460
Query: 482 LVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMH 541
L +AGYP A LGDAVCG+A +ITSKDFLFWFRSHTAKE+KWGGA H KD G +M+
Sbjct: 461 LADAGYPSAALLGDAVCGMATARITSKDFLFWFRSHTAKEVKWGGAMHHPEDKDDGGRMY 520
Query: 542 PRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDS--KMIVNVPSVDDR 599
PRSSF AFLEVVK RSLPWE E++AIHSLQLI+R S + + EDS K +V D +
Sbjct: 521 PRSSFNAFLEVVKSRSLPWEISEINAIHSLQLIMRDSYR--MIEDSGPKGLVYTQIHDSK 578
Query: 600 IEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-D 658
++ +DEL + EMVRLIETA+ PI VD++G +NGWN+K ELTGL +AIG +L+ D
Sbjct: 579 VQGLDELSSVACEMVRLIETASAPIFGVDSAGLINGWNAKIVELTGLQASEAIGKSLLND 638
Query: 659 LVAGDSVDVVKNMLSSAF 676
+V DS VV+N++ AF
Sbjct: 639 IVREDSRGVVENLMCRAF 656
>gi|283131711|dbj|BAI63240.1| phytochrome E [Pieris nana]
Length = 657
Score = 793 bits (2047), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/678 (58%), Positives = 498/678 (73%), Gaps = 30/678 (4%)
Query: 7 NKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPS 61
N N +R S A + NA DA L ++FD+S F+YS SV + T VP+
Sbjct: 1 NNPNNNRKSKAVALYNA--------DAGLLDEFDQSADSGKSFNYSRSVVNAPKT--VPA 50
Query: 62 STVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALT 121
++AYL R+QRG LIQPFGCM+A++E +F ++GYSEN +L L + V Q+ L
Sbjct: 51 EQITAYLSRIQRGGLIQPFGCMLAIEEPSFKIIGYSENCFNLLGLNLNNVFESNQERGL- 109
Query: 122 LGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEP 181
+GID RTLF+ S +L A E++LLNPI +H + + KPFYAILHRIDVG+VIDLEP
Sbjct: 110 IGIDARTLFSPSSGVSLVNAVGSKEISLLNPIWVHSRNTQKPFYAILHRIDVGIVIDLEP 169
Query: 182 VNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKF 241
D ++ AGA++S KL +AISRLQSLP G+I +LCD +V +V LTGYDRVMVYKF
Sbjct: 170 ARSGDPALSLAGAVQSQKLVVRAISRLQSLPRGDIGVLCDRVVEDVQKLTGYDRVMVYKF 229
Query: 242 HEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDK 301
H+D+HGEVV+E R DLEPYLG HYPATDIPQA+RFL +N+VRMICDC + V+VI
Sbjct: 230 HDDDHGEVVSEIRSTDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCHSSQVRVIGTD 289
Query: 302 KLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLV 361
+L QPL L STLRAPHGCH +YM NMGSIASLV++V +N +ND KLWGLV
Sbjct: 290 ELKQPLCLVNSTLRAPHGCHTQYMANMGSIASLVLAVVVN------NNDS---MKLWGLV 340
Query: 362 VCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSP 421
VCHHTSPR+VPFPLRYACEFL+Q FG+Q+ E++L++QL EK +LR QT+LCDM LRD+P
Sbjct: 341 VCHHTSPRYVPFPLRYACEFLMQAFGLQLYMELQLASQLVEKKVLRMQTLLCDMRLRDAP 400
Query: 422 VGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDS 481
GIVTQ+P++MDLVKCDGAAL+Y GK WLLGVTPT+ Q+KDIAEWLL+ H STGLSTDS
Sbjct: 401 FGIVTQSPSIMDLVKCDGAALFYCGKCWLLGVTPTKSQVKDIAEWLLKNHADSTGLSTDS 460
Query: 482 LVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMH 541
L +AGYP A LGDAVCG+A +ITSKDFLFWFRSHTAKE+KWGGA H KD G +M
Sbjct: 461 LADAGYPSAALLGDAVCGMATARITSKDFLFWFRSHTAKEVKWGGAMHHPEDKDDGGRMF 520
Query: 542 PRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDS--KMIVNVPSVDDR 599
PRSSF AFLEVVK RSLPWE E++AIHSLQLI+R S + + EDS K +V D +
Sbjct: 521 PRSSFNAFLEVVKSRSLPWEISEINAIHSLQLIMRDSYR--MIEDSGPKGLVYTQIHDSK 578
Query: 600 IEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-D 658
++ +DEL + EMVRLIETA+ PI VD++G +NGWN+K ELTGL +AIG +L+ D
Sbjct: 579 VQGLDELSSVACEMVRLIETASAPIFGVDSAGLINGWNAKIVELTGLQASEAIGKSLLND 638
Query: 659 LVAGDSVDVVKNMLSSAF 676
+V DS VV+N++ AF
Sbjct: 639 IVREDSRGVVENLMCRAF 656
>gi|283131767|dbj|BAI63233.1| phytochrome E [Pieris nana]
Length = 657
Score = 793 bits (2047), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/678 (58%), Positives = 498/678 (73%), Gaps = 30/678 (4%)
Query: 7 NKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPS 61
N N +R S A + NA DA L ++FD+S F+YS SV + T VP+
Sbjct: 1 NNPNNNRKSKAVALYNA--------DAGLLDEFDQSADSGKSFNYSRSVVNAPKT--VPA 50
Query: 62 STVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALT 121
++AYL R+QRG LIQPFGCM+A++E +F ++GYSEN +L L + V Q+ L
Sbjct: 51 EQITAYLSRIQRGGLIQPFGCMLAIEEPSFKIIGYSENCFNLLGLNLNNVFESNQERGL- 109
Query: 122 LGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEP 181
+GID RTLF+ S +L A E++LLNPI +H + + KPFYAILHRIDVG+VIDLEP
Sbjct: 110 IGIDARTLFSLSSGVSLVNAVGSKEISLLNPIWVHSRNTQKPFYAILHRIDVGIVIDLEP 169
Query: 182 VNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKF 241
D ++ AGA++S KL +AISRLQSLP G+I +LCD +V +V LTGYDRVMVYKF
Sbjct: 170 ARSGDPALSLAGAVQSQKLVVRAISRLQSLPGGDIGVLCDRVVEDVQKLTGYDRVMVYKF 229
Query: 242 HEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDK 301
H+D+HGEVV+E R DLEPYLG HYPATDIPQA+RFL +N+VRMICDC + V+VI
Sbjct: 230 HDDDHGEVVSEIRSTDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCHSSQVRVIGTD 289
Query: 302 KLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLV 361
+L QPL L STLRAPHGCH +YM NMGSIASLV++V +N +ND KLWGLV
Sbjct: 290 ELKQPLCLVNSTLRAPHGCHTQYMANMGSIASLVLAVVVN------NNDS---MKLWGLV 340
Query: 362 VCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSP 421
VCHHTSPR+VPFPLRYACEFL+Q FG+Q+ E++L++QL EK +LR QT+LCDM LRD+P
Sbjct: 341 VCHHTSPRYVPFPLRYACEFLMQAFGLQLYMELQLASQLMEKKVLRMQTLLCDMCLRDAP 400
Query: 422 VGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDS 481
GIVTQ+P++MDLVKCDGAAL+Y GK WLLGVTPT+ Q+KDIAEWLL+ H S GLSTDS
Sbjct: 401 FGIVTQSPSIMDLVKCDGAALFYCGKCWLLGVTPTKSQVKDIAEWLLKNHADSKGLSTDS 460
Query: 482 LVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMH 541
L +AGYP A LGDAVCG+A +ITSKDFLFWFRSHTAKE+KWGGA H KD G +M+
Sbjct: 461 LADAGYPSAALLGDAVCGMATARITSKDFLFWFRSHTAKEVKWGGAMHHPEDKDDGGRMY 520
Query: 542 PRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDS--KMIVNVPSVDDR 599
PRSSF AFLEVVK RSLPWE E++AIHSLQLI+R S + + EDS K +V D +
Sbjct: 521 PRSSFNAFLEVVKSRSLPWEISEINAIHSLQLIMRDSYR--MIEDSGPKGLVYTQIHDSK 578
Query: 600 IEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-D 658
++ +DEL + EMVRLIETA+ PI VD++G +NGWN+K ELTGL +AIG +L+ D
Sbjct: 579 VQGLDELSSVACEMVRLIETASAPIFGVDSAGLINGWNAKIVELTGLQASEAIGKSLLND 638
Query: 659 LVAGDSVDVVKNMLSSAF 676
+V DS VV+N++ AF
Sbjct: 639 IVREDSRGVVENLMCRAF 656
>gi|283131693|dbj|BAI63253.1| phytochrome E [Pieris nana]
Length = 657
Score = 793 bits (2047), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/678 (58%), Positives = 499/678 (73%), Gaps = 30/678 (4%)
Query: 7 NKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPS 61
N N +R S A + NA DA L ++FD+S F+YS SV + T VP+
Sbjct: 1 NNPNNNRKSKAVALYNA--------DAGLLDEFDQSADSGKSFNYSRSVVNAPKT--VPA 50
Query: 62 STVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALT 121
++AYL R+QRG LIQPFGCM+A++E +F ++GYSEN +L L + V Q+ L
Sbjct: 51 EQITAYLSRIQRGGLIQPFGCMLAIEEPSFKIIGYSENCFNLLGLNLNNVFESNQERGL- 109
Query: 122 LGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEP 181
+GID RTLF+ S +L A E++LLNPI +H + + KPFYAILHRIDVG+VIDLEP
Sbjct: 110 IGIDARTLFSPSSGVSLVNAVGSKEISLLNPIWVHSRNTQKPFYAILHRIDVGIVIDLEP 169
Query: 182 VNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKF 241
V D ++ AGA++S KL +AISRLQSLP G+I +LCD +V +V LTGYDRVMVYKF
Sbjct: 170 VRSGDPALSLAGAVQSQKLVVRAISRLQSLPGGDIGVLCDRVVEDVQKLTGYDRVMVYKF 229
Query: 242 HEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDK 301
H+D+HGEVV+E R DLEPYLG HYPATDIPQA+RFL +N+VRMICDC + V+VI
Sbjct: 230 HDDDHGEVVSEIRSTDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCHSSQVRVIGTD 289
Query: 302 KLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLV 361
+L QPL L STLRAPHGCH +YM NMGSIASLV++V +N +ND KLWGLV
Sbjct: 290 ELKQPLCLVNSTLRAPHGCHTQYMANMGSIASLVLAVVVN------NNDS---MKLWGLV 340
Query: 362 VCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSP 421
VCHHTSPR+VPFPLRYACEFL+Q FG+Q+ E++L++QL EK +LR QT+LCDM LRD+P
Sbjct: 341 VCHHTSPRYVPFPLRYACEFLMQAFGLQLYMELQLASQLVEKKVLRMQTLLCDMRLRDAP 400
Query: 422 VGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDS 481
GIVTQ+P++MDLVKCDGAAL+Y GK WLLGVTPT+ Q+KDIAEWLL+ H STGLSTDS
Sbjct: 401 FGIVTQSPSIMDLVKCDGAALFYCGKCWLLGVTPTKSQVKDIAEWLLKNHADSTGLSTDS 460
Query: 482 LVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMH 541
L +AGYP A LGDAVCG+ +ITS+DFLFWFRSHTAKE+KWGGA H KD G +M+
Sbjct: 461 LADAGYPSAALLGDAVCGMVTARITSRDFLFWFRSHTAKEVKWGGAMHHPEDKDDGGRMY 520
Query: 542 PRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDS--KMIVNVPSVDDR 599
PRSSF AFLEVVK RSLPWE E++AIHSLQLI+R S + + EDS K +V D +
Sbjct: 521 PRSSFNAFLEVVKSRSLPWEISEINAIHSLQLIMRDSYR--MIEDSGPKGLVYTQIHDSK 578
Query: 600 IEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-D 658
++ +DEL + EMVRLIETA+ PI VD++G +NGWN+K ELTGL +AIG +L+ D
Sbjct: 579 VQGLDELSSVACEMVRLIETASAPIFGVDSAGLINGWNAKIVELTGLQASEAIGKSLLND 638
Query: 659 LVAGDSVDVVKNMLSSAF 676
+V DS VV+N++ AF
Sbjct: 639 IVREDSRGVVENLMCRAF 656
>gi|283131699|dbj|BAI63256.1| phytochrome E [Pieris nana]
Length = 657
Score = 792 bits (2046), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/678 (58%), Positives = 498/678 (73%), Gaps = 30/678 (4%)
Query: 7 NKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPS 61
N N +R S A + NA DA L ++FD+S F+YS SV + T VP+
Sbjct: 1 NNPNNNRKSKAVALYNA--------DAGLLDEFDQSADSGKSFNYSRSVVNAPKT--VPA 50
Query: 62 STVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALT 121
++AYL R+QRG LIQPFGCM+A++E +F ++GYSEN +L L + V Q+ L
Sbjct: 51 EQITAYLSRIQRGGLIQPFGCMLAIEEPSFKIIGYSENCFNLLGLNLNNVFESNQERGL- 109
Query: 122 LGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEP 181
+GID RTLF+ S +L A E++LLNPI +H + + KPFYAILHRIDVG+VIDLEP
Sbjct: 110 IGIDARTLFSPSSGVSLVNAVGSKEISLLNPIWVHSRNTQKPFYAILHRIDVGIVIDLEP 169
Query: 182 VNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKF 241
D ++ AGA++S KL +AISRLQSLP G+I +LCD +V +V LTGYDRVMVYKF
Sbjct: 170 ARSGDPALSLAGAVQSQKLVVRAISRLQSLPGGDIGVLCDRVVEDVQKLTGYDRVMVYKF 229
Query: 242 HEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDK 301
H+D+HGEVV+E R DLEPYLG HYPATDIPQA+RFL +N+VRMICDC + V+VI
Sbjct: 230 HDDDHGEVVSEIRSTDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCHSSQVRVIGTD 289
Query: 302 KLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLV 361
+L QPL L STLRAPHGCH +YM NMGSIASLV++V +N +ND KLWGLV
Sbjct: 290 ELKQPLCLVNSTLRAPHGCHTQYMANMGSIASLVLAVVVN------NNDS---MKLWGLV 340
Query: 362 VCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSP 421
VCHHTSPR+VPFPLRYACEFL+Q FG+Q+ E++L++QL EK +LR QT+LCDM LRD+P
Sbjct: 341 VCHHTSPRYVPFPLRYACEFLMQAFGLQLYMELQLASQLVEKKVLRMQTLLCDMRLRDAP 400
Query: 422 VGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDS 481
GIVTQ+P++MDLVKCDGAAL+Y GK WLLGVTPT+ Q+KDIAEWLL+ H STGLSTDS
Sbjct: 401 FGIVTQSPSIMDLVKCDGAALFYCGKCWLLGVTPTKSQVKDIAEWLLKNHADSTGLSTDS 460
Query: 482 LVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMH 541
L +AGYP A LGDAVCG+ +ITSKDFLFWFRSHTAKE+KWGGA H KD G +M+
Sbjct: 461 LADAGYPSAALLGDAVCGMVTARITSKDFLFWFRSHTAKEVKWGGAMHHPEDKDDGGRMY 520
Query: 542 PRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDS--KMIVNVPSVDDR 599
PRSSF AFLEVVK RSLPWE E++AIHSLQLI+R S + + EDS K +V D +
Sbjct: 521 PRSSFNAFLEVVKSRSLPWEISEINAIHSLQLIMRDSYR--MIEDSGPKGLVYTQIHDSK 578
Query: 600 IEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-D 658
++ +DEL + EMVRLIETA+ PI VD++G +NGWN+K ELTGL +AIG +L+ D
Sbjct: 579 VQGLDELSSVACEMVRLIETASAPIFGVDSAGLINGWNAKIVELTGLQASEAIGKSLLND 638
Query: 659 LVAGDSVDVVKNMLSSAF 676
+V DS VV+N++ AF
Sbjct: 639 IVREDSRGVVENLMCRAF 656
>gi|283131685|dbj|BAI63249.1| phytochrome E [Pieris nana]
Length = 657
Score = 792 bits (2045), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/678 (58%), Positives = 498/678 (73%), Gaps = 30/678 (4%)
Query: 7 NKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPS 61
N N +R S A + NA DA L ++FD+S F+YS SV + T VP+
Sbjct: 1 NNPNNNRKSKAVALYNA--------DAGLLDEFDQSADSGKSFNYSRSVVNAPKT--VPA 50
Query: 62 STVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALT 121
++AYL R+QRG LIQPFGCM+A++E +F ++GYSEN +L L + V Q+ L
Sbjct: 51 EQITAYLSRIQRGGLIQPFGCMLAIEEPSFKIIGYSENCFNLLGLNLNNVFESNQERGL- 109
Query: 122 LGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEP 181
+GID RTLF+ S +L A E++LLNPI +H + + KPFYAILHRIDVG+VIDLEP
Sbjct: 110 IGIDARTLFSPSSGVSLVNAVGSKEISLLNPIWVHSRNTQKPFYAILHRIDVGIVIDLEP 169
Query: 182 VNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKF 241
V D ++ AGA++S KL +AISRLQSLP G+I +LCD +V +V LTGYDRVMVYKF
Sbjct: 170 VRSGDPALSLAGAVQSQKLVVRAISRLQSLPGGDIGVLCDRVVEDVQKLTGYDRVMVYKF 229
Query: 242 HEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDK 301
H+D+HGEVV+E R DLEPYLG HYPATDIPQA+RFL +N+VRMICDC + V VI
Sbjct: 230 HDDDHGEVVSEIRSTDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCHSSQVGVIGTD 289
Query: 302 KLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLV 361
+L QPL L STLRAPHGCH +YM NMGSIASLV++V +N +ND KLWGLV
Sbjct: 290 ELKQPLCLVNSTLRAPHGCHTQYMANMGSIASLVLAVVVN------NNDS---MKLWGLV 340
Query: 362 VCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSP 421
VCHHTSPR+VPFPLRYACEFL+Q FG+Q+ E++L++QL EK +LR QT+LCDM LRD+P
Sbjct: 341 VCHHTSPRYVPFPLRYACEFLMQAFGLQLYMELQLASQLVEKKVLRMQTLLCDMRLRDAP 400
Query: 422 VGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDS 481
GIVTQ+P++MDLVKCDGAAL+Y GK WLLGVTPT+ Q+KDIAEWLL+ H STGLSTDS
Sbjct: 401 FGIVTQSPSIMDLVKCDGAALFYCGKCWLLGVTPTKSQVKDIAEWLLKNHADSTGLSTDS 460
Query: 482 LVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMH 541
L +AGYP A LGDAVCG+ +ITSKDFLFWFRSHTAKE+KWGGA H KD G +M+
Sbjct: 461 LADAGYPSAALLGDAVCGMVTARITSKDFLFWFRSHTAKEVKWGGAMHHPEDKDDGGRMY 520
Query: 542 PRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDS--KMIVNVPSVDDR 599
PRSSF AFLEVVK RSLPWE E++AIHSLQLI+R S + + EDS K +V D +
Sbjct: 521 PRSSFNAFLEVVKSRSLPWEISEINAIHSLQLIMRDSYR--MIEDSGPKGLVYTQIHDSK 578
Query: 600 IEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-D 658
++ +DEL + EMVRLIETA+ PI VD++G +NGWN+K ELTGL +AIG +L+ D
Sbjct: 579 VQGLDELSSVACEMVRLIETASAPIFGVDSAGLINGWNAKIVELTGLQASEAIGKSLLND 638
Query: 659 LVAGDSVDVVKNMLSSAF 676
+V DS VV+N++ AF
Sbjct: 639 IVREDSRGVVENLMCRAF 656
>gi|13383410|gb|AAK20968.1| phytochrome C [Heuchera canadensis]
Length = 435
Score = 792 bits (2045), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/433 (85%), Positives = 399/433 (92%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HRIDVGLVIDLEPVNP DVP+TAAGALKSYKLAAKAISRLQSLP+GNI+LL
Sbjct: 1 SGKPFYAIIHRIDVGLVIDLEPVNPADVPITAAGALKSYKLAAKAISRLQSLPNGNITLL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
CDVLV EVSDLTGYDRVMVYKFHEDEHGEV+AE RPDLEPYLG HYPATDIPQASRFL
Sbjct: 61 CDVLVKEVSDLTGYDRVMVYKFHEDEHGEVIAESCRPDLEPYLGLHYPATDIPQASRFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDCLA VKVIQDK+L QPLSLCGSTLR+PHGCH +YM NMG+IASLVMSVT
Sbjct: 121 MKNKVRMICDCLASSVKVIQDKRLPQPLSLCGSTLRSPHGCHTQYMANMGTIASLVMSVT 180
Query: 340 INEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQ 399
INE +DE+ DQ +GRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGV +NKEVEL++Q
Sbjct: 181 INEEDDEMVTDQPKGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVCINKEVELASQ 240
Query: 400 LREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQ 459
REKHIL+TQTVLCDMLLR++PVGIVTQ+PNVMDLVKCDGAALYY+ K WLLG TPT+ Q
Sbjct: 241 TREKHILQTQTVLCDMLLRNAPVGIVTQSPNVMDLVKCDGAALYYKKKAWLLGSTPTDAQ 300
Query: 460 IKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTA 519
I+DI +WLLEYH GSTGLSTDSLVEAGYP AL LGDAVCG+AA+KITS DFLFWFRSHTA
Sbjct: 301 IRDITDWLLEYHGGSTGLSTDSLVEAGYPDALNLGDAVCGMAAIKITSNDFLFWFRSHTA 360
Query: 520 KEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSL 579
+EIKWGGAKHD KD GRKMHPRSSFKAFLEVVK+RSLPWEDVEMD IHSLQLILRGSL
Sbjct: 361 REIKWGGAKHDPDEKDDGRKMHPRSSFKAFLEVVKRRSLPWEDVEMDVIHSLQLILRGSL 420
Query: 580 QDEVAEDSKMIVN 592
QDE +DSK IVN
Sbjct: 421 QDETVDDSKTIVN 433
>gi|283131765|dbj|BAI63234.1| phytochrome E [Pieris nana]
gi|283131769|dbj|BAI63232.1| phytochrome E [Pieris nana]
gi|283131771|dbj|BAI63231.1| phytochrome E [Pieris nana]
Length = 657
Score = 791 bits (2044), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/678 (58%), Positives = 498/678 (73%), Gaps = 30/678 (4%)
Query: 7 NKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPS 61
N N +R S A + NA DA L ++FD+S F+YS SV + T VP+
Sbjct: 1 NNPNNNRKSKAVALYNA--------DAGLLDEFDQSADSGKSFNYSRSVVNAPKT--VPA 50
Query: 62 STVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALT 121
++AYL R+QRG LIQPFGCM+A++E +F ++GYSEN +L L + V Q+ L
Sbjct: 51 EQITAYLSRIQRGGLIQPFGCMLAIEEPSFKIIGYSENCFNLLGLNLNNVFESNQERGL- 109
Query: 122 LGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEP 181
+GID RTLF+ S +L A E++LLNPI +H + + KPFYAILHRIDVG+VIDLEP
Sbjct: 110 IGIDARTLFSLSSGVSLVNAVGSKEISLLNPIWVHSRNTQKPFYAILHRIDVGIVIDLEP 169
Query: 182 VNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKF 241
D ++ AGA++S KL +AISRLQSLP G+I +LCD +V +V LTGYDRVMVYKF
Sbjct: 170 ARSGDPALSLAGAVQSQKLVVRAISRLQSLPGGDIGVLCDRVVEDVQKLTGYDRVMVYKF 229
Query: 242 HEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDK 301
H+D+HGEVV+E R DLEPYLG HYPATDIPQA+RFL +N+VRMICDC + V+VI
Sbjct: 230 HDDDHGEVVSEIRSTDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCHSSQVRVIGTD 289
Query: 302 KLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLV 361
+L QPL L STLRAPHGCH +YM NMGSIASLV++V +N +ND KLWGLV
Sbjct: 290 ELKQPLCLVNSTLRAPHGCHTQYMANMGSIASLVLAVVVN------NNDS---MKLWGLV 340
Query: 362 VCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSP 421
VCHHTSPR+VPFPLRYACEFL+Q FG+Q+ E++L++QL EK +LR QT+LCDM LRD+P
Sbjct: 341 VCHHTSPRYVPFPLRYACEFLMQAFGLQLYMELQLASQLVEKKVLRMQTLLCDMRLRDAP 400
Query: 422 VGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDS 481
GIVTQ+P++MDLVKCDGAAL+Y GK WLLGVTPT+ Q+KDIAEWLL+ H S GLSTDS
Sbjct: 401 FGIVTQSPSIMDLVKCDGAALFYCGKCWLLGVTPTKSQVKDIAEWLLKNHADSKGLSTDS 460
Query: 482 LVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMH 541
L +AGYP A LGDAVCG+A +ITSKDFLFWFRSHTAKE+KWGGA H KD G +M+
Sbjct: 461 LADAGYPSAALLGDAVCGMATARITSKDFLFWFRSHTAKEVKWGGAMHHPEDKDDGGRMY 520
Query: 542 PRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDS--KMIVNVPSVDDR 599
PRSSF AFLEVVK RSLPWE E++AIHSLQLI+R S + + EDS K +V D +
Sbjct: 521 PRSSFNAFLEVVKSRSLPWEISEINAIHSLQLIMRDSYR--MIEDSGPKGLVYTQIHDSK 578
Query: 600 IEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-D 658
++ +DEL + EMVRLIETA+ PI VD++G +NGWN+K ELTGL +AIG +L+ D
Sbjct: 579 VQGLDELSSVACEMVRLIETASAPIFGVDSAGLINGWNAKIVELTGLQASEAIGKSLLND 638
Query: 659 LVAGDSVDVVKNMLSSAF 676
+V DS VV+N++ AF
Sbjct: 639 IVREDSRGVVENLMCRAF 656
>gi|283131703|dbj|BAI63258.1| phytochrome E [Pieris nana]
Length = 657
Score = 791 bits (2044), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/678 (58%), Positives = 498/678 (73%), Gaps = 30/678 (4%)
Query: 7 NKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPS 61
N N +R S A + NA DA L ++FD+S F+YS SV + T VP+
Sbjct: 1 NNPNNNRKSKAVALYNA--------DAGLLDEFDQSADSGKSFNYSRSVVNAPKT--VPA 50
Query: 62 STVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALT 121
++AYL R+QRG LIQPFGCM+A++E +F ++GYSEN +L L + V Q+ L
Sbjct: 51 EQITAYLSRIQRGGLIQPFGCMLAIEEPSFKIIGYSENCFNLLGLNLNNVFESNQERGL- 109
Query: 122 LGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEP 181
+GID RTLF+ S +L A E++LLNPI +H + + KPFYAILHRIDVG+VIDLEP
Sbjct: 110 IGIDARTLFSPSSGVSLVNAVGSKEISLLNPIWVHSRNTQKPFYAILHRIDVGIVIDLEP 169
Query: 182 VNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKF 241
V D ++ AGA++S KL +AISRLQSLP G+I +LCD +V +V LTGYDRVMVYKF
Sbjct: 170 VRSGDPALSLAGAVQSQKLVVRAISRLQSLPGGDIGVLCDRVVEDVQKLTGYDRVMVYKF 229
Query: 242 HEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDK 301
H+D+HGEVV+E R DLEPYLG HYPATDIPQA+RFL +N+VRMICDC + V+VI
Sbjct: 230 HDDDHGEVVSEIRSTDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCHSSQVRVIGTD 289
Query: 302 KLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLV 361
+L QPL L STLRAPHGCH +YM NMGSIASLV++V +N +ND KLWGLV
Sbjct: 290 ELKQPLCLVNSTLRAPHGCHTQYMANMGSIASLVLAVVVN------NNDS---MKLWGLV 340
Query: 362 VCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSP 421
VCHHTSP +VPFPLRYACEFL+Q FG+Q+ E++L++QL EK +LR QT+LCDM LRD+P
Sbjct: 341 VCHHTSPHYVPFPLRYACEFLMQAFGLQLYMELQLASQLVEKKVLRMQTLLCDMRLRDAP 400
Query: 422 VGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDS 481
GIVTQ+P++MDLVKCDGAAL+Y GK WLLGVTPT+ Q+KDIAEWLL+ H STGLSTDS
Sbjct: 401 FGIVTQSPSIMDLVKCDGAALFYCGKCWLLGVTPTKSQVKDIAEWLLKNHADSTGLSTDS 460
Query: 482 LVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMH 541
L +AGYP A LGDAVCG+ +ITSKDFLFWFRSHTAKE+KWGGA H KD G +M+
Sbjct: 461 LADAGYPSAALLGDAVCGMVTARITSKDFLFWFRSHTAKEVKWGGAMHHPEDKDDGGRMY 520
Query: 542 PRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDS--KMIVNVPSVDDR 599
PRSSF AFLEVVK RSLPWE E++AIHSLQLI+R S + + EDS K +V D +
Sbjct: 521 PRSSFNAFLEVVKSRSLPWEISEINAIHSLQLIMRDSYR--MIEDSGPKGLVYTQIHDSK 578
Query: 600 IEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-D 658
++ +DEL + EMVRLIETA+ PI VD++G +NGWN+K ELTGL +AIG +L+ D
Sbjct: 579 VQGLDELSSVACEMVRLIETASAPIFGVDSAGLINGWNAKIVELTGLQASEAIGKSLLND 638
Query: 659 LVAGDSVDVVKNMLSSAF 676
+V DS VV+N++ AF
Sbjct: 639 IVREDSRGVVENLMCRAF 656
>gi|283131763|dbj|BAI63235.1| phytochrome E [Pieris nana]
Length = 657
Score = 791 bits (2044), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/678 (58%), Positives = 498/678 (73%), Gaps = 30/678 (4%)
Query: 7 NKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPS 61
N N +R S A + NA DA L ++FD+S F+YS SV + T VP+
Sbjct: 1 NNPNNNRKSKAVALYNA--------DAGLLDEFDQSADSGKSFNYSRSVVNAPKT--VPA 50
Query: 62 STVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALT 121
++AYL R+QRG LIQPFGCM+A++E +F ++GYSEN +L L + V Q+ L
Sbjct: 51 EQITAYLSRIQRGGLIQPFGCMLAIEEPSFKIIGYSENCFNLLGLNLNNVFESNQERGL- 109
Query: 122 LGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEP 181
+GID RTLF+ S +L A E++LLNPI +H + + KPFYAILHRIDVG+VIDLEP
Sbjct: 110 IGIDARTLFSLSSGVSLVNAVGSKEISLLNPIWVHSRNTQKPFYAILHRIDVGIVIDLEP 169
Query: 182 VNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKF 241
D ++ AGA++S KL +AISRLQSLP G+I +LCD +V +V LTGYDRVMVYKF
Sbjct: 170 ARSGDPALSLAGAVQSQKLVVRAISRLQSLPRGDIGVLCDRVVEDVQKLTGYDRVMVYKF 229
Query: 242 HEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDK 301
H+D+HGEVV+E R DLEPYLG HYPATDIPQA+RFL +N+VRMICDC + V+VI
Sbjct: 230 HDDDHGEVVSEIRSTDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCHSSQVRVIGTD 289
Query: 302 KLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLV 361
+L QPL L STLRAPHGCH +YM NMGSIASLV++V +N +ND KLWGLV
Sbjct: 290 ELKQPLCLVNSTLRAPHGCHTQYMANMGSIASLVLAVVVN------NNDS---MKLWGLV 340
Query: 362 VCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSP 421
VCHHTSPR+VPFPLRYACEFL+Q FG+Q+ E++L++QL EK +LR QT+LCDM LRD+P
Sbjct: 341 VCHHTSPRYVPFPLRYACEFLMQAFGLQLYMELQLASQLVEKKVLRMQTLLCDMRLRDAP 400
Query: 422 VGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDS 481
GIVTQ+P++MDLVKCDGAAL+Y GK WLLGVTPT+ Q+KDIAEWLL+ H S GLSTDS
Sbjct: 401 FGIVTQSPSIMDLVKCDGAALFYCGKCWLLGVTPTKSQVKDIAEWLLKNHADSKGLSTDS 460
Query: 482 LVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMH 541
L +AGYP A LGDAVCG+A +ITSKDFLFWFRSHTAKE+KWGGA H KD G +M+
Sbjct: 461 LADAGYPSAALLGDAVCGMATARITSKDFLFWFRSHTAKEVKWGGAMHHPEDKDDGGRMY 520
Query: 542 PRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDS--KMIVNVPSVDDR 599
PRSSF AFLEVVK RSLPWE E++AIHSLQLI+R S + + EDS K +V D +
Sbjct: 521 PRSSFNAFLEVVKSRSLPWEISEINAIHSLQLIMRDSYR--MIEDSGPKGLVYTQIHDSK 578
Query: 600 IEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-D 658
++ +DEL + EMVRLIETA+ PI VD++G +NGWN+K ELTGL +AIG +L+ D
Sbjct: 579 VQGLDELSSVACEMVRLIETASAPIFGVDSAGLINGWNAKIVELTGLQASEAIGKSLLND 638
Query: 659 LVAGDSVDVVKNMLSSAF 676
+V DS VV+N++ AF
Sbjct: 639 IVREDSRGVVENLMCRAF 656
>gi|283131675|dbj|BAI63244.1| phytochrome E [Pieris nana]
Length = 657
Score = 790 bits (2041), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/678 (58%), Positives = 498/678 (73%), Gaps = 30/678 (4%)
Query: 7 NKTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPS 61
N N +R S A + NA DA L ++FD+S F+YS SV + T VP+
Sbjct: 1 NNPNNNRKSKAVALYNA--------DAGLLDEFDQSADSGKSFNYSRSVVNAPKT--VPA 50
Query: 62 STVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALT 121
++AYL R+QRG LIQPFGCM+A++E +F ++GYSEN +L L + V Q+ L
Sbjct: 51 EQITAYLSRIQRGGLIQPFGCMLAIEEPSFKIIGYSENCFNLLGLNLNNVFESNQERGL- 109
Query: 122 LGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEP 181
+GID RTLF+ S +L A E++LLNPI +H + + KPFYAILHRIDVG+VIDLEP
Sbjct: 110 IGIDARTLFSPSSGVSLVNAVGSKEISLLNPIWVHSRNTQKPFYAILHRIDVGIVIDLEP 169
Query: 182 VNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKF 241
D ++ AGA++S KL +AISRLQSLP G+I +LCD +V +V LTGYDRVMVYKF
Sbjct: 170 ARSGDPALSLAGAVQSQKLVVRAISRLQSLPGGDIGVLCDRVVEDVQKLTGYDRVMVYKF 229
Query: 242 HEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDK 301
H+D+HGEVV+E R DLEPYLG HYPATDIPQA+RFL +N+VRMICDC + V+VI
Sbjct: 230 HDDDHGEVVSEIRSTDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCHSSQVRVIGTD 289
Query: 302 KLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLV 361
+L QPL L STLRAPHGCH +YM NMGSIASLV++V +N +ND KLWGLV
Sbjct: 290 ELKQPLCLVNSTLRAPHGCHTQYMANMGSIASLVLAVVVN------NNDS---MKLWGLV 340
Query: 362 VCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSP 421
VCHHTSPR+VPFPLRYACEFL+Q FG+Q+ E++L++QL EK +L QT+LCDM LRD+P
Sbjct: 341 VCHHTSPRYVPFPLRYACEFLMQAFGLQLYMELQLASQLVEKKVLWMQTLLCDMRLRDAP 400
Query: 422 VGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDS 481
GIVTQ+P++MDLVKCDGAAL+Y GK WLLGVTPT+ Q+KDIAEWLL+ H STGLSTDS
Sbjct: 401 FGIVTQSPSIMDLVKCDGAALFYCGKCWLLGVTPTKSQVKDIAEWLLKNHADSTGLSTDS 460
Query: 482 LVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMH 541
L +AGYP A LGDAVCG+A +ITSKDFLFWFRSHTAKE+KWGGA H KD G +M+
Sbjct: 461 LADAGYPSAALLGDAVCGMATARITSKDFLFWFRSHTAKEVKWGGAMHHPEDKDDGGRMY 520
Query: 542 PRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDS--KMIVNVPSVDDR 599
PRSSF AFLEVVK RSLPWE E++AIHSLQLI+R S + + EDS K +V D +
Sbjct: 521 PRSSFNAFLEVVKSRSLPWEISEINAIHSLQLIMRDSYR--MIEDSGPKGLVYTQIHDSK 578
Query: 600 IEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-D 658
++ +DEL + EMVRLIETA+ PI VD++G +NGWN+K ELTGL +AIG +L+ D
Sbjct: 579 VQGLDELSSVACEMVRLIETASAPIFGVDSAGLINGWNAKIVELTGLQASEAIGKSLLND 638
Query: 659 LVAGDSVDVVKNMLSSAF 676
+V DS VV+N++ AF
Sbjct: 639 IVREDSRGVVENLMCRAF 656
>gi|13383452|gb|AAK20989.1| phytochrome C [Spathiphyllum wallisii]
Length = 465
Score = 790 bits (2039), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/465 (81%), Positives = 415/465 (89%), Gaps = 5/465 (1%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HRID+GL+IDLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL
Sbjct: 1 SGKPFYAIMHRIDMGLIIDLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
CDVLV EV +LTGY RVM YKFHEDEHGEVV+ECRRPDLEPYLG HYPATDIPQASRFL
Sbjct: 61 CDVLVREVRELTGYGRVMAYKFHEDEHGEVVSECRRPDLEPYLGLHYPATDIPQASRFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDC A P+KVIQDK+L QPLSLCGSTLRAPHGCHA+YM NMGSI SLVMSVT
Sbjct: 121 MKNKVRMICDCSAQPIKVIQDKRLAQPLSLCGSTLRAPHGCHAQYMANMGSIGSLVMSVT 180
Query: 340 INEAEDELDN--DQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELS 397
INE ED+ + Q++GRKLWGLVVCHHTSPRFVPFPLRYACEFL+QVF +Q+NKEVEL+
Sbjct: 181 INEDEDDDSSGEQQQKGRKLWGLVVCHHTSPRFVPFPLRYACEFLMQVFAIQLNKEVELA 240
Query: 398 AQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTE 457
AQ REKHILRTQT+LCDMLLRD+PVGI TQ+PNVMDLVKCDGAALYY+ + WLL VTPTE
Sbjct: 241 AQTREKHILRTQTLLCDMLLRDTPVGIFTQSPNVMDLVKCDGAALYYQNQFWLLRVTPTE 300
Query: 458 EQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSH 517
QI+DIA WL++ H +TGLSTDSL EAGYP A LGDAVCG+AA+KITS+D +FWFRSH
Sbjct: 301 AQIRDIAAWLIDCHNSTTGLSTDSLSEAGYPSASTLGDAVCGMAAIKITSRDLIFWFRSH 360
Query: 518 TAKEIKWGGAKHDSGGK-DGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILR 576
TAKEIKWGGAKHD + D GRKMHPRSSFKAFLEVVK+RSLPWEDVEMDAIHSLQLILR
Sbjct: 361 TAKEIKWGGAKHDPVDRDDDGRKMHPRSSFKAFLEVVKRRSLPWEDVEMDAIHSLQLILR 420
Query: 577 GSLQDE-VAEDSKMIVNVPSVD-DRIEKIDELRIITNEMVRLIET 619
SLQDE V ++SK IVNV S D +I+ +DELR + NEMVRL+ET
Sbjct: 421 SSLQDENVRDNSKGIVNVISDDAKKIQGVDELRTVANEMVRLMET 465
>gi|406685537|gb|AFS51209.1| phytochrome P, partial [Parasitaxus usta]
Length = 587
Score = 789 bits (2038), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/565 (68%), Positives = 451/565 (79%), Gaps = 23/565 (4%)
Query: 120 LTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDL 179
L +G DVR LF+ + A AL+KA G +NPI +H + +GKPFYAI+HRIDVG+VIDL
Sbjct: 9 LAIGTDVRRLFSPASARALEKA---GMAREMNPIWVHSQFTGKPFYAIVHRIDVGMVIDL 65
Query: 180 EPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVY 239
EPV T A++S KLA +AISRLQSLP+G+I LLCD +V +V +LTGYDRVMVY
Sbjct: 66 EPVR------TGMSAVQSQKLAVRAISRLQSLPAGDIGLLCDTVVEDVRELTGYDRVMVY 119
Query: 240 KFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQ 299
KFHEDEHGEVVAE RR DLEPY G HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ
Sbjct: 120 KFHEDEHGEVVAEIRRVDLEPYQGLHYPATDIPQASRFLFMQNRVRMICDCSATPVQVIQ 179
Query: 300 DKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG----- 354
++L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+V IN ND+E G
Sbjct: 180 SQELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVIN------GNDEEGGGTSGR 233
Query: 355 --RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
KLWGLVVCHHTSPR VPFPLRYACEFL+Q FG+Q+N E++L+AQL EKHILRTQT+L
Sbjct: 234 SSMKLWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQLAAQLTEKHILRTQTLL 293
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDMLLRD+P+GIV+Q+P++MDLVKCDGAALYY G W LGVTPTE QIKDIA+WLLEYH
Sbjct: 294 CDMLLRDAPIGIVSQSPSIMDLVKCDGAALYYGGTTWCLGVTPTEGQIKDIADWLLEYHG 353
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AGYPG +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH
Sbjct: 354 DSTGLSTDSLADAGYPGVASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPD 413
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVN 592
KD GR+MHPRSSFKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD ++K +V+
Sbjct: 414 DKDDGRRMHPRSSFKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSNTKTMVH 473
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +++ DEL + +EMVRLIETA PILAVD++G VNGWN+K AELTGL V +A+
Sbjct: 474 ARLNDLKLQGFDELSSVASEMVRLIETATAPILAVDSNGLVNGWNAKVAELTGLPVGEAM 533
Query: 653 GTALV-DLVAGDSVDVVKNMLSSAF 676
G +LV DLV +S + V ML A
Sbjct: 534 GKSLVHDLVFEESAESVDKMLYRAL 558
>gi|57281885|emb|CAC85513.1| phytochrome A [Triticum aestivum]
Length = 807
Score = 784 bits (2024), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/604 (63%), Positives = 461/604 (76%), Gaps = 7/604 (1%)
Query: 80 FGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQ 139
FGC++A+DE++F V+ +SENAPEML HAVP++ L +G +VR+LFT GA AL
Sbjct: 1 FGCLLALDEKSFNVIAFSENAPEMLTTVSHAVPSVNDPPRLDIGTNVRSLFTDQGATALH 60
Query: 140 KAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYK 199
KA F +V+LLNPIL+ CKTSGKPFYAI+HR LV+D EPVNP + P +AAGAL+SYK
Sbjct: 61 KALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVNPTEFPASAAGALQSYK 120
Query: 200 LAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLE 259
LAAKAIS++Q+LP G+I LLC+ +V EV +LTGYDRVM YKFHED HGEV AE +P LE
Sbjct: 121 LAAKAISKIQALPGGSIELLCNTVVKEVFELTGYDRVMAYKFHEDNHGEVFAEITKPGLE 180
Query: 260 PYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHG 319
PYLG HYPATDIPQA+RFL MKNKVRMICD + +KVI+D+ L +SLCGS LRA H
Sbjct: 181 PYLGLHYPATDIPQAARFLFMKNKVRMICDVRSRSIKVIEDEALPFDISLCGSALRAAHS 240
Query: 320 CHARYMENMGSIASLVMSVTINEAE--DELDND----QEQGRKLWGLVVCHHTSPRFVPF 373
CH +YMENM SIASLVM+V +NE E DE+ ++ Q+Q + LWGLVVCHH SPR+VPF
Sbjct: 241 CHLQYMENMNSIASLVMAVVVNENEEDDEVGSEQPAQQQQKKILWGLVVCHHESPRYVPF 300
Query: 374 PLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD-SPVGIVTQTPNVM 432
PLRYACEFL QVF V VNKE E+ QLREK ILRTQT+L DML ++ SP+ IV+ PN+M
Sbjct: 301 PLRYACEFLAQVFAVHVNKEFEVQKQLREKSILRTQTILSDMLFKEASPLTIVSGAPNIM 360
Query: 433 DLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALA 492
DL+KCDGAAL Y K+W LG PTE QI+D+A WL E H STGLST+SL +AGYPGA A
Sbjct: 361 DLIKCDGAALLYGDKVWRLGNAPTESQIRDLALWLSEVHMDSTGLSTESLHDAGYPGASA 420
Query: 493 LGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEV 552
LGD+VCG+A KI S D LFWFRSHTA+EI+WGGAK+D +D R+MHPR SFKAFLEV
Sbjct: 421 LGDSVCGMAVAKINSSDILFWFRSHTAQEIRWGGAKNDPSDQDDSRRMHPRLSFKAFLEV 480
Query: 553 VKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNE 612
VK +SL W D EMDAIHSLQLILRG++ V K ++ D +++ + EL+ +T+E
Sbjct: 481 VKMKSLAWTDSEMDAIHSLQLILRGTVDGVVKPTGKASLDEQIGDLKLDGLAELQAVTSE 540
Query: 613 MVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNML 672
MVRL+ETA VPILAVD +G VNGWN KAAELTGL VD AIG ++ LV SV VV+ ML
Sbjct: 541 MVRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHILTLVEESSVSVVQRML 600
Query: 673 SSAF 676
A
Sbjct: 601 YLAL 604
>gi|363547631|gb|AEW26858.1| phytochrome P [Ceratozamia fuscoviridis]
Length = 568
Score = 783 bits (2023), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/579 (65%), Positives = 461/579 (79%), Gaps = 15/579 (2%)
Query: 98 ENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHC 157
ENA MLDLAP +VP +E++ LT+G DVRTLFT S A +L+KAA E++L NPI +
Sbjct: 1 ENAAGMLDLAPQSVPTMEKE-FLTIGTDVRTLFTPSSAMSLEKAAAAQEISLANPISMQS 59
Query: 158 KTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNIS 217
++SGK FYAI+HRIDVG+VID EP+ D ++ AGA++S KLA +AISRLQ+LP+G+I
Sbjct: 60 RSSGKAFYAIVHRIDVGMVIDFEPLG--DAALSVAGAVQSQKLAVRAISRLQALPAGDIG 117
Query: 218 LLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRF 277
+LCD +V +V +LTGYDRVMVY+FHEDEHGEV+AE RR DLEPYLG HYPATDIPQASRF
Sbjct: 118 MLCDSVVQDVRELTGYDRVMVYRFHEDEHGEVMAEMRRSDLEPYLGLHYPATDIPQASRF 177
Query: 278 LIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMS 337
L ++N+VRMICDC + PV+V+Q +L QPL L GSTLRAPHGCHA+YM NMGSIASLVM+
Sbjct: 178 LFIQNRVRMICDCRSAPVRVLQAAELRQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMA 237
Query: 338 VTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELS 397
V +N KLWGLVVCHHTSPR VPFP+R ACEFL+Q FG+Q+N E++L+
Sbjct: 238 VVVN-----------ANTKLWGLVVCHHTSPRTVPFPVRCACEFLMQAFGLQLNMELQLA 286
Query: 398 AQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTE 457
AQ EK IL+TQT+LCDMLLRD+P+GIVTQTP++MDLV+CDGAAL Y G +W LGV P E
Sbjct: 287 AQATEKRILKTQTLLCDMLLRDAPIGIVTQTPSIMDLVRCDGAALCYGGTVWALGVAPAE 346
Query: 458 EQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSH 517
QIKDIA+WLLE H TGLSTDSL +AGYPGA +LGDAVCG+AA +IT+KDFLFWFRS
Sbjct: 347 AQIKDIADWLLECHGDWTGLSTDSLADAGYPGAASLGDAVCGMAAARITAKDFLFWFRSQ 406
Query: 518 TAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRG 577
TAKEIKWGG KH +D GR+MHPRSSFKAFLEVVK+RS PWE+ EMDAIHSLQLILRG
Sbjct: 407 TAKEIKWGGEKHHPDDRDDGRRMHPRSSFKAFLEVVKRRSFPWENAEMDAIHSLQLILRG 466
Query: 578 SLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWN 637
S +D ++K +V+ D R++ ++EL + +EMVRLIETA PILAVD+ G VNGWN
Sbjct: 467 SFEDIDDTETKTMVHSRLNDLRVQSMEELSSVASEMVRLIETATAPILAVDSRGLVNGWN 526
Query: 638 SKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
+K AELTGL V +A G +LV DLV DS++ V+ +L +A
Sbjct: 527 AKIAELTGLPVGEATGKSLVGDLVYEDSMETVERLLRNA 565
>gi|326489438|dbj|BAK01700.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1089
Score = 777 bits (2006), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/603 (63%), Positives = 458/603 (75%), Gaps = 7/603 (1%)
Query: 81 GCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQK 140
GC++A+DE++F V+ +SENAPEML HAVP+++ L +G +VR+LFT GA AL K
Sbjct: 43 GCLLALDEKSFNVIAFSENAPEMLTTVSHAVPSVDDPPRLDIGTNVRSLFTEQGATALHK 102
Query: 141 AANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKL 200
A F +V+LLNP L+ CKTSGKPFYAI+HR LV+D EPVNP + P TAAGAL+SYKL
Sbjct: 103 ALGFADVSLLNPFLVQCKTSGKPFYAIVHRATGCLVVDFEPVNPTEFPATAAGALQSYKL 162
Query: 201 AAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEP 260
AAKAIS++Q+LP G++ LLC+ +V EV +LTGYDRVM YKFHED HGEV AE +P LEP
Sbjct: 163 AAKAISKIQALPGGSMELLCNTVVKEVFELTGYDRVMAYKFHEDNHGEVFAEITKPGLEP 222
Query: 261 YLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGC 320
YLG HYPATDIPQA+RFL MKNKVRMICD A +KVI+D+ L +SLCGS+LRA H C
Sbjct: 223 YLGLHYPATDIPQAARFLFMKNKVRMICDVRARTLKVIEDEALPFDISLCGSSLRAAHSC 282
Query: 321 HARYMENMGSIASLVMSVTINEAEDELDN------DQEQGRKLWGLVVCHHTSPRFVPFP 374
H +YMENM SIASLVM+V +NE+E++ + Q++ + LWGLVVCHH SPR+VPFP
Sbjct: 283 HLQYMENMNSIASLVMAVVVNESEEDDEAESEQPAQQQKKKILWGLVVCHHESPRYVPFP 342
Query: 375 LRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRD-SPVGIVTQTPNVMD 433
LRYACEFL QVF V VNKE E+ QLREK ILR QT+L DML ++ SP+ IV+ TPN+MD
Sbjct: 343 LRYACEFLAQVFAVHVNKEFEVQKQLREKSILRMQTILSDMLFKEASPLTIVSGTPNIMD 402
Query: 434 LVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALAL 493
L+KCDGAAL Y K+W LG PTE QI+ IA WL E H STGLST+SL +AGYPGA AL
Sbjct: 403 LIKCDGAALLYGDKVWRLGNAPTESQIRHIALWLSEVHMDSTGLSTESLHDAGYPGASAL 462
Query: 494 GDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVV 553
GD VCGIA KI S D LFWFRSHTA+EI+WGGAK+D +D R+MHPR SFKAFLEVV
Sbjct: 463 GDMVCGIAVAKINSNDILFWFRSHTAEEIRWGGAKNDPSDQDDSRRMHPRLSFKAFLEVV 522
Query: 554 KQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEM 613
K +SL W D EMDAIHSLQLILRG+L D K ++ D +++ I EL+ +T+EM
Sbjct: 523 KMKSLAWSDYEMDAIHSLQLILRGALDDVAKPTGKASLDEQIGDLKLDGIAELQAVTSEM 582
Query: 614 VRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLS 673
VRL+ETA VPILAVD +G VNGWN KAAELTGL VD AIG ++ LV SV VV+ ML
Sbjct: 583 VRLMETATVPILAVDGNGLVNGWNQKAAELTGLRVDDAIGRHILTLVEESSVPVVQRMLY 642
Query: 674 SAF 676
A
Sbjct: 643 LAL 645
>gi|297800250|ref|XP_002868009.1| hypothetical protein ARALYDRAFT_914880 [Arabidopsis lyrata subsp.
lyrata]
gi|297313845|gb|EFH44268.1| hypothetical protein ARALYDRAFT_914880 [Arabidopsis lyrata subsp.
lyrata]
Length = 1116
Score = 774 bits (1998), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/669 (57%), Positives = 480/669 (71%), Gaps = 31/669 (4%)
Query: 19 SKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQR 73
SK AQ S+DA L DFD+S F+YS SV S + VP ++AYL +QR
Sbjct: 19 SKPQKSNTAQYSVDAALFADFDQSIYSGKSFNYSKSV--ISPPNYVPDEHITAYLSNIQR 76
Query: 74 GRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPN----IEQQDALTLGIDVRTL 129
G L+QPFGC+IAV+E +F +LG SEN+ E L L A + ++ L +GID RTL
Sbjct: 77 GGLVQPFGCLIAVEEPSFRILGVSENSSEFLGLLSLASTSHSGEFDKVKGL-IGIDARTL 135
Query: 130 FTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPV 189
FT S A+L KAA+F E++LLNP+L+H +T+ KPFYAILHRID G+V+DLEP D +
Sbjct: 136 FTPSSGASLAKAASFTEISLLNPVLVHSRTTQKPFYAILHRIDAGIVMDLEPAKSGDPAL 195
Query: 190 TAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEV 249
T AGA++S KLA +AISRLQSLP G+I CD +V +V LTGYDRVMVY+FHED+HGEV
Sbjct: 196 TLAGAVQSQKLAVRAISRLQSLPGGDIGAFCDTVVEDVQRLTGYDRVMVYQFHEDDHGEV 255
Query: 250 VAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSL 309
V+E RR DLEPYLG HYPATDIPQA+RFL +N+VRMICDC A PVKV+Q ++L +PL L
Sbjct: 256 VSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNATPVKVVQSEELKRPLCL 315
Query: 310 CGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPR 369
STLRAPHGCH +YM NMGS+ASL +++ I + KLWGLVV HH SPR
Sbjct: 316 VNSTLRAPHGCHTQYMANMGSVASLALAIVIKGKDSS---------KLWGLVVGHHCSPR 366
Query: 370 FVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTP 429
+VPFPLRYACEFL+Q FG+Q+ E++L++QL EK +RTQT+LCDMLLRD+ IVTQ+P
Sbjct: 367 YVPFPLRYACEFLMQAFGLQLQMELQLASQLAEKKAMRTQTLLCDMLLRDTVSAIVTQSP 426
Query: 430 NVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYH-RGSTGLSTDSLVEAGYP 488
+MDLVKCDGAALYY+GK WL+GVTP E Q+KD+ WL+E H STGL+TDSLV+AGYP
Sbjct: 427 GIMDLVKCDGAALYYKGKCWLVGVTPNESQVKDLVNWLVENHGDDSTGLTTDSLVDAGYP 486
Query: 489 GALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKA 548
GA++LGDAVCG+AA I+SKD+L WFRS+TA IKWGGAKH KD +MHPRSSFKA
Sbjct: 487 GAISLGDAVCGVAAAGISSKDYLLWFRSNTASAIKWGGAKHRPKDKDDAGRMHPRSSFKA 546
Query: 549 FLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRI 608
FLEV K RSLPWE E+DAIHSL+LI+R S V S +D +EL
Sbjct: 547 FLEVAKSRSLPWEISEIDAIHSLRLIMRESFTS--------CRPVLSGNDVARDANELTS 598
Query: 609 ITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDV 667
EMVR+IETA PI VD+SG +NGWN K AE+TGL +A+G +L ++V +S V
Sbjct: 599 FVCEMVRVIETATAPIFGVDSSGCINGWNKKTAEMTGLLASEAMGKSLANEIVQEESRAV 658
Query: 668 VKNMLSSAF 676
++++L A
Sbjct: 659 LESLLCKAL 667
>gi|449459392|ref|XP_004147430.1| PREDICTED: phytochrome E-like [Cucumis sativus]
Length = 1134
Score = 770 bits (1989), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/694 (54%), Positives = 501/694 (72%), Gaps = 32/694 (4%)
Query: 3 SKSTNKTNYSRSSSARSKQNA-----------RVAA--QTSIDAKLAEDFDESD-----F 44
++S+++ + SSSA S A R+AA Q + DA L F+ SD F
Sbjct: 5 NRSSDRGMAAFSSSADSNTRAPPPPTTTSTDNRLAALVQYNADAGLLNKFELSDASGESF 64
Query: 45 DYSTSVNISSSTSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEML 104
+YS SV + +VP ++AYL ++QRG L+QPFGC++A++E +F ++ +SEN E+L
Sbjct: 65 NYSRSV--LEAPVSVPEEQITAYLSKIQRGGLVQPFGCLLAIEESSFKIISFSENCFELL 122
Query: 105 DLAPHAVPNIEQQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPF 164
L + + + L +G+D+R LFT S A+L KAA+ E++LLNP+ ++ +T+ KPF
Sbjct: 123 GLNDDQFGSAQGKKGL-IGVDMRALFTPSSGASLAKAASSREISLLNPVWVYSRTTQKPF 181
Query: 165 YAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLV 224
YAILHRIDVG+VIDLEP D ++ AGA++S KLA +AISRLQ+LPSG+I +LCD +V
Sbjct: 182 YAILHRIDVGIVIDLEPARSVDPALSLAGAVQSQKLAVRAISRLQALPSGDIGILCDTVV 241
Query: 225 NEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKV 284
++ LTGYDRVMVYKFH+DEHGEVV+E RR DLEPYLG HYPA DIPQA+RFL +N++
Sbjct: 242 EDIQKLTGYDRVMVYKFHDDEHGEVVSEIRRSDLEPYLGLHYPAIDIPQAARFLFKQNRI 301
Query: 285 RMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE 344
RMICDC A PV VIQ L QPL L ST+RAPH CH +YM NM +++SL M++ +N
Sbjct: 302 RMICDCNAKPVPVIQSDDLKQPLCLVNSTIRAPHSCHLQYMANMSTLSSLAMAIVMNS-- 359
Query: 345 DELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKH 404
+ +LWGLVVCHHTSPR+VPFPLRYACEFL+Q FG+Q+ E++L++QL EK
Sbjct: 360 ------DDSPTRLWGLVVCHHTSPRYVPFPLRYACEFLMQAFGLQLYMELQLASQLTEKK 413
Query: 405 ILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIA 464
IL+TQT+LCDMLLR SP ++T++P++MDLVKCDGAALYY+G +LLG+TPTE Q+KD+A
Sbjct: 414 ILKTQTLLCDMLLRGSPCALLTRSPSIMDLVKCDGAALYYKGACYLLGITPTEAQVKDLA 473
Query: 465 EWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKW 524
EW+L H STGLSTDSL +AGYP A +LGDAVCG+A +ITSKDFLFWFRSH AKEI+W
Sbjct: 474 EWILNNHGDSTGLSTDSLADAGYPEAASLGDAVCGMATARITSKDFLFWFRSHVAKEIQW 533
Query: 525 GGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVA 584
GGAKH KD +MHPRSSFKAFLEV K RSL WE E++AIHSLQLI+R S +
Sbjct: 534 GGAKHHPDDKDDSGRMHPRSSFKAFLEVAKSRSLSWEVQEINAIHSLQLIMRESFPNSGD 593
Query: 585 EDSKMIVNVPSVDD-RIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAEL 643
+SK N P + D ++ I+EL + EMVRLIETA VPI VD++G +NGWN+K +EL
Sbjct: 594 SNSKA-ENSPQLSDAEMQDINELSSVACEMVRLIETATVPIFGVDSTGLINGWNAKISEL 652
Query: 644 TGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSAF 676
GL +A+G +LV ++V DS +++LS A
Sbjct: 653 VGLHTGEALGKSLVNEIVHEDSRGTAEDLLSCAL 686
>gi|13383402|gb|AAK20964.1| phytochrome C [Dioscorea elephantipes]
Length = 463
Score = 770 bits (1987), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/465 (80%), Positives = 409/465 (87%), Gaps = 7/465 (1%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HRIDVGLVIDLEPVNP DVPVTAA ALKSYKLAAKAISRLQSLPSGNI LL
Sbjct: 1 SGKPFYAIMHRIDVGLVIDLEPVNPADVPVTAAAALKSYKLAAKAISRLQSLPSGNIPLL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
CDVLV EVS+L GYDRVM YKFHEDEHGEV+AECRR DLEPYLG HYPATDIPQASRFL
Sbjct: 61 CDVLVKEVSELIGYDRVMAYKFHEDEHGEVIAECRRSDLEPYLGLHYPATDIPQASRFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDC APPVKVIQDK+L QPLSL GSTLRAPHGCHA+YM NMGSIASLVMSVT
Sbjct: 121 MKNKVRMICDCSAPPVKVIQDKRLPQPLSLGGSTLRAPHGCHAQYMANMGSIASLVMSVT 180
Query: 340 INEAEDEL-DNDQEQ-GRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELS 397
INE +DE DQ+Q G KLWGLV CHHTSPRFVPFPLRYACEFL+QVFG+Q+NKEVEL+
Sbjct: 181 INEDDDETGSGDQQQNGMKLWGLVGCHHTSPRFVPFPLRYACEFLLQVFGIQLNKEVELA 240
Query: 398 AQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTE 457
Q RE HILRTQ + CDMLLRD+P+G + +PNVMDLVKCDGAALYY+ + WLL +TPTE
Sbjct: 241 TQQRE-HILRTQ-LSCDMLLRDAPIGYLLNSPNVMDLVKCDGAALYYKNQFWLLEITPTE 298
Query: 458 EQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSH 517
QI+DI WLLEYH +TGLST+SL EAGYPGA+ LGDAVC +AA KITSKDF+FWFRSH
Sbjct: 299 AQIRDIFAWLLEYHNSTTGLSTNSLTEAGYPGAVELGDAVCSMAATKITSKDFIFWFRSH 358
Query: 518 TAKEIKWGGAKHDSGGK-DGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILR 576
T+KEIKWGGAKHD G + D GRKMHPRSSFKAFLEVVK+RSLPWEDV+MDAIHSLQLILR
Sbjct: 359 TSKEIKWGGAKHDPGDRTDEGRKMHPRSSFKAFLEVVKRRSLPWEDVDMDAIHSLQLILR 418
Query: 577 GSLQDE-VAEDSKMIVN-VPSVDDRIEKIDELRIITNEMVRLIET 619
GSLQDE V ++SK IVN P +I+ +DELRI+T EMVRL+ET
Sbjct: 419 GSLQDEPVTDNSKTIVNATPDDAKQIQHMDELRIVTTEMVRLMET 463
>gi|452817|emb|CAA54075.1| phytochrome E [Arabidopsis thaliana]
gi|5816999|emb|CAB53654.1| phytochrome E [Arabidopsis thaliana]
gi|7268606|emb|CAB78815.1| phytochrome E [Arabidopsis thaliana]
Length = 1112
Score = 766 bits (1978), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/681 (55%), Positives = 484/681 (71%), Gaps = 33/681 (4%)
Query: 8 KTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSS 62
+++ S +S+ + + AQ S+DA L DF +S F+YS SV S ++VP
Sbjct: 4 ESSSSAASNMKPQPQKSNTAQYSVDAALFADFAQSIYTGKSFNYSKSV--ISPPNHVPDE 61
Query: 63 TVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDAL-- 120
++AYL +QRG L+QPFGC+IAV+E +F +LG S+N+ + L L ++P+
Sbjct: 62 HITAYLSNIQRGGLVQPFGCLIAVEEPSFRILGLSDNSSDFLGLL--SLPSTSHSGEFDK 119
Query: 121 ---TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVI 177
+GID RTLFT S A+L KAA+F E++LLNP+L+H +T+ KPFYAILHRID G+V+
Sbjct: 120 VKGLIGIDARTLFTPSSGASLSKAASFTEISLLNPVLVHSRTTQKPFYAILHRIDAGIVM 179
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEP D +T AGA++S KLA +AISRLQSLP G+I LCD +V +V LTGYDRVM
Sbjct: 180 DLEPAKSGDPALTLAGAVQSQKLAVRAISRLQSLPGGDIGALCDTVVEDVQRLTGYDRVM 239
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VY+FHED+HGEVV+E RR DLEPYLG HYPATDIPQA+RFL +N+VRMICDC A PVKV
Sbjct: 240 VYQFHEDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNATPVKV 299
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKL 357
+Q ++L +PL L STLRAPHGCH +YM NMGS+ASL +++ + + KL
Sbjct: 300 VQSEELKRPLCLVNSTLRAPHGCHTQYMANMGSVASLALAIVVKGKDSS---------KL 350
Query: 358 WGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLL 417
WGLVV HH SPR+VPFPLRYACEFL+Q FG+Q+ E++L++QL EK +RTQT+LCDMLL
Sbjct: 351 WGLVVGHHCSPRYVPFPLRYACEFLMQAFGLQLQMELQLASQLAEKKAMRTQTLLCDMLL 410
Query: 418 RDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYH-RGSTG 476
RD+ IVTQ+P +MDLVKCDGAALYY+GK WL+GVTP E Q+KD+ WL+E H STG
Sbjct: 411 RDTVSAIVTQSPGIMDLVKCDGAALYYKGKCWLVGVTPNESQVKDLVNWLVENHGDDSTG 470
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
L+TDSLV+AGYPGA++LGDAVCG+AA + +SKD+L WFRS+TA IKWGGAKH KD
Sbjct: 471 LTTDSLVDAGYPGAISLGDAVCGVAAAEFSSKDYLLWFRSNTASAIKWGGAKHHPKDKDD 530
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
+MHPRSSF AFLEV K RSLPWE E+DAIHSL+LI+R S V S
Sbjct: 531 AGRMHPRSSFTAFLEVAKSRSLPWEISEIDAIHSLRLIMRESFTSSRP--------VLSG 582
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
+ +EL EMVR+IETA PI VD+SG +NGWN K AE+TGL +A+G +L
Sbjct: 583 NGVARDANELTSFVCEMVRVIETATAPIFGVDSSGCINGWNKKTAEMTGLLASEAMGKSL 642
Query: 657 VD-LVAGDSVDVVKNMLSSAF 676
D +V +S ++++L A
Sbjct: 643 ADEIVQEESRAALESLLCKAL 663
>gi|240255991|ref|NP_193547.4| phytochrome E [Arabidopsis thaliana]
gi|332278136|sp|P42498.2|PHYE_ARATH RecName: Full=Phytochrome E
gi|332658600|gb|AEE84000.1| phytochrome E [Arabidopsis thaliana]
Length = 1112
Score = 765 bits (1976), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/681 (55%), Positives = 483/681 (70%), Gaps = 33/681 (4%)
Query: 8 KTNYSRSSSARSKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSS 62
+++ S +S+ + + AQ S+DA L DF +S F+YS SV S ++VP
Sbjct: 4 ESSSSAASNMKPQPQKSNTAQYSVDAALFADFAQSIYTGKSFNYSKSV--ISPPNHVPDE 61
Query: 63 TVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHAVPNIEQQDAL-- 120
++AYL +QRG L+QPFGC+IAV+E +F +LG S+N+ + L L ++P+
Sbjct: 62 HITAYLSNIQRGGLVQPFGCLIAVEEPSFRILGLSDNSSDFLGLL--SLPSTSHSGEFDK 119
Query: 121 ---TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVI 177
+GID RTLFT S A+L KAA+F E++LLNP+L+H +T+ KPFYAILHRID G+V+
Sbjct: 120 VKGLIGIDARTLFTPSSGASLSKAASFTEISLLNPVLVHSRTTQKPFYAILHRIDAGIVM 179
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEP D +T AGA++S KLA +AISRLQSLP G+I LCD +V +V LTGYDRVM
Sbjct: 180 DLEPAKSGDPALTLAGAVQSQKLAVRAISRLQSLPGGDIGALCDTVVEDVQRLTGYDRVM 239
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VY+FHED+HGEVV+E RR DLEPYLG HYPATDIPQA+RFL +N+VRMICDC A PVKV
Sbjct: 240 VYQFHEDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNATPVKV 299
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKL 357
+Q ++L +PL L STLRAPHGCH +YM NMGS+ASL +++ + + KL
Sbjct: 300 VQSEELKRPLCLVNSTLRAPHGCHTQYMANMGSVASLALAIVVKGKDSS---------KL 350
Query: 358 WGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLL 417
WGLVV HH SPR+VPFPLRYACEFL+Q FG+Q+ E++L++QL EK +RTQT+LCDMLL
Sbjct: 351 WGLVVGHHCSPRYVPFPLRYACEFLMQAFGLQLQMELQLASQLAEKKAMRTQTLLCDMLL 410
Query: 418 RDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYH-RGSTG 476
RD+ IVTQ+P +MDLVKCDGAALYY+GK WL+GVTP E Q+KD+ WL+E H STG
Sbjct: 411 RDTVSAIVTQSPGIMDLVKCDGAALYYKGKCWLVGVTPNESQVKDLVNWLVENHGDDSTG 470
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
L+TDSLV+AGYPGA++LGDAVCG+AA +SKD+L WFRS+TA IKWGGAKH KD
Sbjct: 471 LTTDSLVDAGYPGAISLGDAVCGVAAAGFSSKDYLLWFRSNTASAIKWGGAKHHPKDKDD 530
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSV 596
+MHPRSSF AFLEV K RSLPWE E+DAIHSL+LI+R S V S
Sbjct: 531 AGRMHPRSSFTAFLEVAKSRSLPWEISEIDAIHSLRLIMRESFTSSRP--------VLSG 582
Query: 597 DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTAL 656
+ +EL EMVR+IETA PI VD+SG +NGWN K AE+TGL +A+G +L
Sbjct: 583 NGVARDANELTSFVCEMVRVIETATAPIFGVDSSGCINGWNKKTAEMTGLLASEAMGKSL 642
Query: 657 VD-LVAGDSVDVVKNMLSSAF 676
D +V +S ++++L A
Sbjct: 643 ADEIVQEESRAALESLLCKAL 663
>gi|13383430|gb|AAK20978.1| phytochrome C [Pachysandra americana]
Length = 412
Score = 760 bits (1963), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/412 (85%), Positives = 387/412 (93%), Gaps = 2/412 (0%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HRIDVGLVIDLEPVNP DVPVTAAGALKSYKLAAKAIS+LQSLPSGNISLL
Sbjct: 1 SGKPFYAIMHRIDVGLVIDLEPVNPADVPVTAAGALKSYKLAAKAISKLQSLPSGNISLL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
CDVLV EV++LTGYDRVMVYKFHEDEHGEVVAECRR DLEPYLG HYPATDIPQASRFL
Sbjct: 61 CDVLVKEVNELTGYDRVMVYKFHEDEHGEVVAECRRTDLEPYLGLHYPATDIPQASRFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
+KNKVRMICDCLAPP++VIQDK+L+QPLSLCGSTLRAPHGCHA+YMENMGSIASLVMSVT
Sbjct: 121 LKNKVRMICDCLAPPIRVIQDKRLEQPLSLCGSTLRAPHGCHAQYMENMGSIASLVMSVT 180
Query: 340 INEAEDE--LDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELS 397
INE +D+ +++DQ++GRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFG+Q+NKEVEL+
Sbjct: 181 INEDDDDDDVESDQQKGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGIQINKEVELA 240
Query: 398 AQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTE 457
AQ +EKHILR QT+LCDMLLR+SPVGIVT++PNV+DLVKCDGAALYY+ K WLLGVTPTE
Sbjct: 241 AQTKEKHILRNQTMLCDMLLRESPVGIVTKSPNVIDLVKCDGAALYYKNKFWLLGVTPTE 300
Query: 458 EQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSH 517
QI+DI+EWL+EYH GSTGLSTDSL+EAGYPGA LGDAVCG+AA+KITSK+FLFWFRS
Sbjct: 301 AQIRDISEWLIEYHNGSTGLSTDSLMEAGYPGASVLGDAVCGMAAIKITSKEFLFWFRSQ 360
Query: 518 TAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIH 569
TAKEIKWGGAKH+ KD RKMHPRSSFKAFLE VKQR LPWEDVEMDAI
Sbjct: 361 TAKEIKWGGAKHEPFNKDDARKMHPRSSFKAFLEAVKQRCLPWEDVEMDAIQ 412
>gi|226234969|dbj|BAH47474.1| phytochrome E [Cardamine nipponica]
Length = 1116
Score = 760 bits (1962), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/669 (56%), Positives = 477/669 (71%), Gaps = 31/669 (4%)
Query: 19 SKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQR 73
SK AQ S+DA L DFD+S F+YS SV S ++V ++AYL +QR
Sbjct: 19 SKPQKSNTAQYSVDAGLFADFDQSVYSGKSFNYSKSV--ISPHNHVSDEHITAYLSNIQR 76
Query: 74 GRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDL----APHAVPNIEQQDALTLGIDVRTL 129
G L+QPFGC+IAV+E +F +LG SEN E L L + L +GID RTL
Sbjct: 77 GGLVQPFGCLIAVEEPSFRILGVSENCIEFLGLLSLDSTSQCAEFNNVKGL-IGIDARTL 135
Query: 130 FTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPV 189
F+ S A+L KAA+F E++LLNP+L+H KT+ KPFYAILHRID G+VIDLE D +
Sbjct: 136 FSPSSGASLSKAASFTEISLLNPVLVHSKTTQKPFYAILHRIDAGIVIDLEAAKSGDPAL 195
Query: 190 TAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEV 249
T AGA++S KLA +AISRLQSLP G+I LCD +V +V LTGYDRVMVY+FHED+HGEV
Sbjct: 196 TLAGAVQSQKLAVRAISRLQSLPGGDIGALCDTVVEDVQRLTGYDRVMVYQFHEDDHGEV 255
Query: 250 VAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSL 309
V+E RR DLEPYLG HYPATDIPQA+RFL +N+VRMICDC A PVK++Q ++L +PL L
Sbjct: 256 VSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNATPVKIVQSEELKRPLCL 315
Query: 310 CGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPR 369
STLRAPH CH +YM NMGSIASL +++ + + KLWGLVV HH SPR
Sbjct: 316 VNSTLRAPHSCHTQYMANMGSIASLALAIVVKGKDSS---------KLWGLVVGHHCSPR 366
Query: 370 FVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTP 429
+VPFPLRYACEFLIQ FG+Q+ E++L++QL EK +RTQT+LCDMLLRD+ IVTQ+P
Sbjct: 367 YVPFPLRYACEFLIQAFGLQLQMELQLTSQLAEKKAMRTQTLLCDMLLRDTVSAIVTQSP 426
Query: 430 NVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYH-RGSTGLSTDSLVEAGYP 488
+MDLVKCDGAALYY+GK WL+GVTP+E Q+KD+ WL+E H STGL+TDSLV+ GYP
Sbjct: 427 GIMDLVKCDGAALYYKGKCWLVGVTPSELQVKDLVNWLVENHGDDSTGLTTDSLVDVGYP 486
Query: 489 GALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKA 548
GA++ GDA+CG+AA I+SKDFL WFRS+TA +KWGGAKH KD +MHPRSSFKA
Sbjct: 487 GAISFGDAICGVAAAGISSKDFLLWFRSNTASAMKWGGAKHHPKNKDDAGRMHPRSSFKA 546
Query: 549 FLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRI 608
FLEV K RSLPWE E+DAIHSL+LI+R S S+ +++ V+ +EL
Sbjct: 547 FLEVAKSRSLPWEISEIDAIHSLRLIMRESFT-----SSRPVLSANVVE---RDANELTS 598
Query: 609 ITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDV 667
EMVR+IETA PI VD+SG +NGWN+K AE+TGL +A+G +L ++V +S
Sbjct: 599 FVCEMVRVIETATAPIFGVDSSGCINGWNNKTAEMTGLQASEAMGKSLANEIVQEESRAA 658
Query: 668 VKNMLSSAF 676
+++++ A
Sbjct: 659 LESLMCKAL 667
>gi|226234973|dbj|BAH47476.1| phytochrome E [Cardamine nipponica]
Length = 1116
Score = 759 bits (1961), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/668 (56%), Positives = 481/668 (72%), Gaps = 29/668 (4%)
Query: 19 SKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQR 73
SK AQ S+DA L DFD+S F+YS SV S ++V ++AYL +QR
Sbjct: 19 SKPQKSNTAQYSVDAGLFADFDQSVYSGKSFNYSKSV--ISPHNHVSDEHITAYLSNIQR 76
Query: 74 GRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDL-APHAVPNIEQQDALT--LGIDVRTLF 130
G L+QPFGC+IAV+E +F +LG SEN E L L + + + D + +GID RTLF
Sbjct: 77 GGLVQPFGCLIAVEEPSFRILGVSENCIEFLGLLSLDSTSQCAEFDNVKGLIGIDARTLF 136
Query: 131 TSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPVT 190
+ S A+L KAA+F E++LLNP+L+H KT+ KPFYAILHRID G+VIDLE D +T
Sbjct: 137 SPSSGASLSKAASFTEISLLNPVLVHSKTTQKPFYAILHRIDAGIVIDLEAAKSGDPALT 196
Query: 191 AAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVV 250
AGA++S KLA +AISRLQSLP G+I LCD +V +V LTGYDRVMVY+FHED+HGEVV
Sbjct: 197 LAGAVQSQKLAVRAISRLQSLPGGDIGALCDTVVEDVQRLTGYDRVMVYQFHEDDHGEVV 256
Query: 251 AECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLC 310
+E RR DLEPYLG HYPATDIPQA+RFL +N+VRMICDC A PVKV+Q ++L +PL L
Sbjct: 257 SEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNATPVKVVQSEELKRPLCLV 316
Query: 311 GSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRF 370
STLRAPH CH +YM NMGSIASL +++ + + KLWGLVV HH SPR+
Sbjct: 317 NSTLRAPHSCHTQYMANMGSIASLALAIVVKGKDSS---------KLWGLVVGHHCSPRY 367
Query: 371 VPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPN 430
VPFPLRYACEFL+Q FG+Q+ E++L++QL EK +RTQT+LCDMLLRD+ IVTQ+P
Sbjct: 368 VPFPLRYACEFLMQAFGLQLQMELQLTSQLAEKKAMRTQTLLCDMLLRDTVSAIVTQSPG 427
Query: 431 VMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYH-RGSTGLSTDSLVEAGYPG 489
+MDLVKCDGAALYY+GK WL+GVTP+E Q+KD+ WL+E H STGL+TDSLV+AGYPG
Sbjct: 428 IMDLVKCDGAALYYKGKCWLVGVTPSELQVKDLVNWLVENHGDDSTGLTTDSLVDAGYPG 487
Query: 490 ALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAF 549
A++ GDA+CG+AA I+SKD+L WFRS+TA +KWGGAKH KD +MHPRSSFKAF
Sbjct: 488 AISFGDAICGVAAAGISSKDYLLWFRSNTASAMKWGGAKHHPKNKDDAGRMHPRSSFKAF 547
Query: 550 LEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRII 609
LE+ K RSLPWE E+DAIHSL+LI+R S S+ +++ V+ +EL
Sbjct: 548 LEIAKSRSLPWEISEIDAIHSLRLIMRESFT-----SSRPVLSANVVE---RDANELTSF 599
Query: 610 TNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVV 668
EMVR+IETA PI VD+SG +NGWN+K AE+TGL +A+G +L ++V +S +
Sbjct: 600 VCEMVRVIETATAPIFGVDSSGCINGWNNKTAEMTGLQASEAMGKSLANEIVQEESRAAL 659
Query: 669 KNMLSSAF 676
++++ A
Sbjct: 660 ESLMCKAL 667
>gi|226234965|dbj|BAH47472.1| phytochrome E [Cardamine nipponica]
Length = 1116
Score = 759 bits (1959), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/669 (56%), Positives = 477/669 (71%), Gaps = 31/669 (4%)
Query: 19 SKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQR 73
SK AQ S+DA L DFD+S F+YS SV S ++V ++AYL +QR
Sbjct: 19 SKPQKSNTAQYSVDAGLFADFDQSVYSGKSFNYSKSV--ISPHNHVSDEHITAYLSNIQR 76
Query: 74 GRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDL----APHAVPNIEQQDALTLGIDVRTL 129
G L+QPFGC+IAV+E +F +LG SEN E L L + L +GID RTL
Sbjct: 77 GGLVQPFGCLIAVEEPSFRILGVSENCIEFLGLLSLDSTSQCAEFNNVKGL-IGIDARTL 135
Query: 130 FTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPV 189
F+ S A+L KAA+F E++LLNP+L+H KT+ KPFYAILHRID G+VIDLE D +
Sbjct: 136 FSPSSGASLSKAASFTEISLLNPVLVHSKTTQKPFYAILHRIDAGIVIDLEAAKSGDPAL 195
Query: 190 TAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEV 249
T AGA++S KLA +AISRLQSLP G+I LCD +V +V LTGYDRVMVY+FHED+HGEV
Sbjct: 196 TLAGAVQSQKLAVRAISRLQSLPGGDIGALCDTVVEDVQRLTGYDRVMVYQFHEDDHGEV 255
Query: 250 VAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSL 309
V+E RR DLEPYLG HYPATDIPQA+RFL +N+VRMICDC A PVK++Q ++L +PL L
Sbjct: 256 VSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNATPVKIVQSEELKRPLCL 315
Query: 310 CGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPR 369
STLRAPH CH +YM NMGSIASL +++ + + KLWGLVV HH SPR
Sbjct: 316 VNSTLRAPHSCHTQYMANMGSIASLALAIVVKGKDSS---------KLWGLVVGHHCSPR 366
Query: 370 FVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTP 429
+VPFPLRYACEFL+Q FG+Q+ E++L++QL EK +RTQT+LCDMLLRD+ IVTQ+P
Sbjct: 367 YVPFPLRYACEFLMQAFGLQLQMELQLTSQLAEKKAMRTQTLLCDMLLRDTVSAIVTQSP 426
Query: 430 NVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYH-RGSTGLSTDSLVEAGYP 488
+MDLVKCDGAALYY+GK WL+GVTP+E Q+KD+ WL+E H STGL+TDSLV+ GYP
Sbjct: 427 GIMDLVKCDGAALYYKGKCWLVGVTPSELQVKDLVNWLVENHGDDSTGLTTDSLVDVGYP 486
Query: 489 GALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKA 548
GA++ GDA+CG+AA I+SKDFL WFRS+TA +KWGGAKH KD +MHPRSSFKA
Sbjct: 487 GAISFGDAICGVAAAGISSKDFLLWFRSNTASAMKWGGAKHHPKNKDDAGRMHPRSSFKA 546
Query: 549 FLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRI 608
FLEV K RSLPWE E+DAIHSL+LI+R S S+ +++ V+ +EL
Sbjct: 547 FLEVAKSRSLPWEISEIDAIHSLRLIMRESFT-----SSRPVLSANVVE---RDANELTS 598
Query: 609 ITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDV 667
EMVR+IETA PI VD+SG +NGWN+K AE+TGL +A+G +L ++V +S
Sbjct: 599 FVCEMVRVIETATAPIFGVDSSGCINGWNNKTAEMTGLQASEAMGKSLANEIVQEESRAA 658
Query: 668 VKNMLSSAF 676
+++++ A
Sbjct: 659 LESLMCKAL 667
>gi|226235029|dbj|BAH47480.1| phytochrome E [Cardamine nipponica]
Length = 1116
Score = 759 bits (1959), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/669 (56%), Positives = 478/669 (71%), Gaps = 31/669 (4%)
Query: 19 SKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQR 73
SK AQ S+DA L DFD+S F+YS SV S ++V ++AYL +QR
Sbjct: 19 SKPQKSNTAQYSVDAGLFADFDQSVYSGKSFNYSKSV--ISPHNHVSDEHITAYLSNIQR 76
Query: 74 GRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDL----APHAVPNIEQQDALTLGIDVRTL 129
G L+QPFGC+IAV+E +F +LG SEN E L L + L +GID RTL
Sbjct: 77 GGLVQPFGCLIAVEEPSFRILGVSENCIEFLGLLSLDSTSQCAEFNNVKGL-IGIDARTL 135
Query: 130 FTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPV 189
F+ S A+L KAA+F E++LLNP+L+H KT+ KPFYAILHRID G+VIDLE D +
Sbjct: 136 FSPSSGASLSKAASFTEISLLNPVLVHSKTTQKPFYAILHRIDAGIVIDLEAAKSGDPAL 195
Query: 190 TAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEV 249
T AGA++S KLA +AISRLQSLP G+I LCD +V +V LTGYDRVMVY+FHED+HGEV
Sbjct: 196 TLAGAVQSQKLAVRAISRLQSLPGGDIGALCDTVVEDVQRLTGYDRVMVYQFHEDDHGEV 255
Query: 250 VAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSL 309
V+E RR DLEPYLG HYPATDIPQA+RFL +N+VRMICDC A PVKV+Q ++L +PL L
Sbjct: 256 VSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNATPVKVVQSEELKRPLCL 315
Query: 310 CGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPR 369
STLRAPH CH +YM NMGSIASL +++ + + KLWGLVV HH SPR
Sbjct: 316 VNSTLRAPHSCHTQYMANMGSIASLALAIVVKGKDSS---------KLWGLVVGHHCSPR 366
Query: 370 FVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTP 429
+VPFPLRYACEFL+Q FG+Q+ E++L++QL EK +RTQT+LCDMLLRD+ IVTQ+P
Sbjct: 367 YVPFPLRYACEFLMQAFGLQLQMELQLTSQLAEKKAMRTQTLLCDMLLRDTVSAIVTQSP 426
Query: 430 NVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYH-RGSTGLSTDSLVEAGYP 488
+MDLVKCDGAALYY+GK WL+GVTP+E Q+KD+ WL+E H STGL+TDSLV+AGYP
Sbjct: 427 GIMDLVKCDGAALYYKGKCWLVGVTPSELQVKDLVNWLVENHGDDSTGLTTDSLVDAGYP 486
Query: 489 GALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKA 548
GA++ GDA+CG+AA I+SKD+L WFRS+TA +KWGGAKH KD +MHPRSSFKA
Sbjct: 487 GAISFGDAICGVAAAGISSKDYLLWFRSNTASAMKWGGAKHHPKNKDDAGRMHPRSSFKA 546
Query: 549 FLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRI 608
FLE+ K RSLPWE E+DAIHSL+LI+R S S+ +++ V+ +EL
Sbjct: 547 FLEIAKSRSLPWEISEIDAIHSLRLIMRESFT-----SSRPVLSANVVE---RDANELTS 598
Query: 609 ITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDV 667
EMVR+IETA PI VD+SG +NGWN+K AE+TGL +A+G +L ++V +S
Sbjct: 599 FVCEMVRVIETATAPIFGVDSSGCINGWNNKTAEMTGLQASEAMGKSLANEIVQEESRAA 658
Query: 668 VKNMLSSAF 676
+++++ A
Sbjct: 659 LESLMCKAL 667
>gi|226234967|dbj|BAH47473.1| phytochrome E [Cardamine nipponica]
Length = 1116
Score = 759 bits (1959), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/669 (56%), Positives = 477/669 (71%), Gaps = 31/669 (4%)
Query: 19 SKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQR 73
SK AQ S+DA L DFD+S F+YS SV S ++V ++AYL +QR
Sbjct: 19 SKPQKSNTAQYSVDAGLFADFDQSVYSGKSFNYSKSV--ISPHNHVSDEHITAYLSNIQR 76
Query: 74 GRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDL----APHAVPNIEQQDALTLGIDVRTL 129
G L+QPFGC+IAV+E +F +LG SEN E L L + L +GID RTL
Sbjct: 77 GGLVQPFGCLIAVEEPSFRILGVSENCIEFLGLLSLDSTSQCAEFNNVKGL-IGIDARTL 135
Query: 130 FTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPV 189
F+ S A+L KAA+F E++LLNP+L+H KT+ KPFYAILHRID G+VIDLE D +
Sbjct: 136 FSPSSGASLSKAASFTEISLLNPVLVHSKTTQKPFYAILHRIDAGIVIDLEAAKSGDPAL 195
Query: 190 TAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEV 249
T AGA++S KLA +AISRLQSLP G+I LCD +V +V LTGYDRVMVY+FHED+HGEV
Sbjct: 196 TLAGAVQSQKLAVRAISRLQSLPGGDIGALCDTVVEDVQRLTGYDRVMVYQFHEDDHGEV 255
Query: 250 VAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSL 309
V+E RR DLEPYLG HYPATDIPQA+RFL +N+VRMICDC A PVK++Q ++L +PL L
Sbjct: 256 VSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNATPVKIVQSEELKRPLCL 315
Query: 310 CGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPR 369
STLRAPH CH +YM NMGSIASL +++ + + KLWGLVV HH SPR
Sbjct: 316 VNSTLRAPHSCHTQYMANMGSIASLALAIVVKGKDSS---------KLWGLVVGHHCSPR 366
Query: 370 FVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTP 429
+VPFPLRYACEFL+Q FG+Q+ E++L++QL EK +RTQT+LCDMLLRD+ IVTQ+P
Sbjct: 367 YVPFPLRYACEFLMQAFGLQLQMELQLTSQLAEKKAMRTQTLLCDMLLRDTVSAIVTQSP 426
Query: 430 NVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYH-RGSTGLSTDSLVEAGYP 488
+MDLVKCDGAALYY+GK WL+GVTP+E Q+KD+ WL+E H STGL+TDSLV+ GYP
Sbjct: 427 GIMDLVKCDGAALYYKGKCWLVGVTPSELQVKDLVNWLVENHGDDSTGLTTDSLVDVGYP 486
Query: 489 GALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKA 548
GA++ GDA+CG+AA I+SKDFL WFRS+TA +KWGGAKH KD +MHPRSSFKA
Sbjct: 487 GAISFGDAICGVAAAGISSKDFLLWFRSNTASAMKWGGAKHHPKNKDDAGRMHPRSSFKA 546
Query: 549 FLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRI 608
FLEV K RSLPWE E+DAIHSL+LI+R S S+ +++ V+ +EL
Sbjct: 547 FLEVAKSRSLPWEISEIDAIHSLRLIMRESFT-----SSRPVLSANVVE---RDANELTS 598
Query: 609 ITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDV 667
EMVR+IETA PI VD+SG +NGWN+K AE+TGL +A+G +L ++V +S
Sbjct: 599 FVCEMVRVIETATAPIFGVDSSGCINGWNNKTAEMTGLQASEAMGKSLANEIVQEESRAA 658
Query: 668 VKNMLSSAF 676
+++++ A
Sbjct: 659 LESLMCKAL 667
>gi|226234981|dbj|BAH47471.1| phytochrome E [Cardamine nipponica]
Length = 1116
Score = 758 bits (1958), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/669 (56%), Positives = 477/669 (71%), Gaps = 31/669 (4%)
Query: 19 SKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQR 73
SK AQ S+DA L DFD+S F+YS SV S ++V ++AYL +QR
Sbjct: 19 SKPQKSNTAQYSVDAGLFADFDQSVYSGKSFNYSKSV--ISPHNHVSDEHITAYLSNIQR 76
Query: 74 GRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDL----APHAVPNIEQQDALTLGIDVRTL 129
G L+QPFGC+IAV+E +F +LG SEN E L L + L +GID RTL
Sbjct: 77 GGLVQPFGCLIAVEEPSFRILGVSENCIEFLGLLSLDSTSQCAEFNNVKGL-IGIDARTL 135
Query: 130 FTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPV 189
F+ S A+L KAA+F E++LLNP+L+H KT+ KPFYAILHRID G+VIDLE D +
Sbjct: 136 FSPSSGASLSKAASFTEISLLNPVLVHSKTTQKPFYAILHRIDAGIVIDLEAAKSGDPAL 195
Query: 190 TAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEV 249
T AGA++S KLA +AISRLQSLP G+I LCD +V +V LTGYDRVMVY+FHED+HGEV
Sbjct: 196 TLAGAVQSQKLAVRAISRLQSLPGGDIGALCDTVVEDVQRLTGYDRVMVYQFHEDDHGEV 255
Query: 250 VAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSL 309
V+E RR DLEPYLG HYPATDIPQA+RFL +N+VRMICDC A PVK++Q ++L +PL L
Sbjct: 256 VSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNATPVKIVQSEELKRPLCL 315
Query: 310 CGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPR 369
STLRAPH CH +YM NMGSIASL +++ + + KLWGLVV HH SPR
Sbjct: 316 VNSTLRAPHSCHTQYMANMGSIASLALAIVVKGKDSS---------KLWGLVVGHHCSPR 366
Query: 370 FVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTP 429
+VPFPLRYACEFL+Q FG+Q+ E++L++QL EK +RTQT+LCDMLLRD+ IVTQ+P
Sbjct: 367 YVPFPLRYACEFLMQAFGLQLQMELQLTSQLAEKKAMRTQTLLCDMLLRDTVSAIVTQSP 426
Query: 430 NVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYH-RGSTGLSTDSLVEAGYP 488
+MDLVKCDGAALYY+GK WL+GVTP+E Q+KD+ WL+E H STGL+TDSLV+ GYP
Sbjct: 427 GIMDLVKCDGAALYYKGKCWLVGVTPSELQVKDLVNWLVENHGDDSTGLTTDSLVDVGYP 486
Query: 489 GALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKA 548
GA++ GDA+CG+AA I+SKDFL WFRS+TA +KWGGAKH KD +MHPRSSFKA
Sbjct: 487 GAISFGDAICGVAAAGISSKDFLLWFRSNTASAMKWGGAKHHPKNKDDAGRMHPRSSFKA 546
Query: 549 FLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRI 608
FLEV K RSLPWE E+DAIHSL+LI+R S S+ +++ V+ +EL
Sbjct: 547 FLEVAKSRSLPWEISEIDAIHSLRLIMRESFT-----SSRPVLSANVVE---RDANELTS 598
Query: 609 ITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDV 667
EMVR+IETA PI VD+SG +NGWN+K AE+TGL +A+G +L ++V +S
Sbjct: 599 FVCEMVRVIETATAPIFGVDSSGCINGWNNKTAEMTGLQASEAMGKSLANEIVQEESRAA 658
Query: 668 VKNMLSSAF 676
+++++ A
Sbjct: 659 LESLMCKAL 667
>gi|226234971|dbj|BAH47475.1| phytochrome E [Cardamine nipponica]
Length = 1116
Score = 758 bits (1958), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/669 (56%), Positives = 478/669 (71%), Gaps = 31/669 (4%)
Query: 19 SKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQR 73
SK AQ S+DA L DFD+S F+YS SV S ++V ++AYL +QR
Sbjct: 19 SKPQKSNTAQYSVDAGLFADFDQSVYSGKSFNYSKSV--ISPHNHVSDEHITAYLSNIQR 76
Query: 74 GRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDL----APHAVPNIEQQDALTLGIDVRTL 129
G L+QPFGC+IAV+E +F +LG SEN E L L + L +GID RTL
Sbjct: 77 GGLVQPFGCLIAVEEPSFRILGVSENCIEFLGLLSLDSTSQCAEFNNVKGL-IGIDARTL 135
Query: 130 FTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPV 189
F+ S A+L KAA+F E++LLNP+L+H KT+ KPFYAILHRID G+VIDLE D +
Sbjct: 136 FSPSSGASLSKAASFTEISLLNPVLVHSKTTQKPFYAILHRIDAGIVIDLEAAKSGDPAL 195
Query: 190 TAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEV 249
T AGA++S KLA +AISRLQSLP G+I LCD +V +V LTGYDRVMVY+FHED+HGEV
Sbjct: 196 TLAGAVQSQKLAVRAISRLQSLPGGDIGALCDTVVEDVQRLTGYDRVMVYQFHEDDHGEV 255
Query: 250 VAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSL 309
V+E RR DLEPYLG HYPATDIPQA+RFL +N+VRMICDC A PVKV+Q ++L +PL L
Sbjct: 256 VSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNATPVKVVQSEELKRPLCL 315
Query: 310 CGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPR 369
STLRAPH CH +YM NMGSIASL +++ + + KLWGLVV HH SPR
Sbjct: 316 VNSTLRAPHSCHTQYMANMGSIASLALAIVVKGKDSS---------KLWGLVVGHHCSPR 366
Query: 370 FVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTP 429
+VPFPLRYACEFL+Q FG+Q+ E++L++QL EK +RTQT+LCDMLLRD+ IVTQ+P
Sbjct: 367 YVPFPLRYACEFLMQAFGLQLQMELQLTSQLAEKKAMRTQTLLCDMLLRDTVSAIVTQSP 426
Query: 430 NVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYH-RGSTGLSTDSLVEAGYP 488
+MDLVKCDGAALYY+GK WL+GVTP+E Q+KD+ WL+E H STGL+TDSLV+AGYP
Sbjct: 427 GIMDLVKCDGAALYYKGKCWLVGVTPSELQVKDLVNWLVENHGDDSTGLTTDSLVDAGYP 486
Query: 489 GALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKA 548
GA++ GDA+CG+AA I+SKD+L WFRS+TA +KWGGAKH KD +MHPRSSFKA
Sbjct: 487 GAISFGDAICGVAAAGISSKDYLLWFRSNTASAMKWGGAKHHPKNKDDAGRMHPRSSFKA 546
Query: 549 FLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRI 608
FLE+ K RSLPWE E+DAIHSL+LI+R S S+ +++ V+ +EL
Sbjct: 547 FLEIAKSRSLPWEISEIDAIHSLRLIMRESFT-----SSRPVLSANVVE---RDANELTS 598
Query: 609 ITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDV 667
EMVR+IETA PI VD+SG +NGWN+K AE+TGL +A+G +L ++V +S
Sbjct: 599 FVCEMVRVIETATAPIFGVDSSGCINGWNNKTAEMTGLQASEAMGKSLANEIVQEESRAA 658
Query: 668 VKNMLSSAF 676
+++++ A
Sbjct: 659 LESLMCKAL 667
>gi|226235033|dbj|BAH47482.1| phytochrome E [Cardamine resedifolia]
Length = 1116
Score = 757 bits (1955), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/650 (57%), Positives = 467/650 (71%), Gaps = 30/650 (4%)
Query: 19 SKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQR 73
SK AQ S+DA L DFD+S F+YS SV S ++V ++AYL +QR
Sbjct: 19 SKPQKSNTAQYSVDAGLFADFDQSVYSGKSFNYSKSV--ISPHNHVSDEHITAYLSNIQR 76
Query: 74 GRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDL----APHAVPNIEQQDALTLGIDVRTL 129
G L+QPFGC+IAV+E +F +LG SEN E L L + L +GID RTL
Sbjct: 77 GGLVQPFGCLIAVEEPSFRILGVSENCIEFLGLLSLDSTSQCAEFNNVKGL-IGIDARTL 135
Query: 130 FTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPV 189
F+ S A+L KAA+F E++LLNP+L+H KT+ KPFYAILHRID G VIDLE D +
Sbjct: 136 FSPSSGASLSKAASFTEISLLNPVLVHSKTTQKPFYAILHRIDAGTVIDLEAAKSGDPAL 195
Query: 190 TAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEV 249
T AGA++S KLA +AISRLQSLP G+I LCD +V +V LTGYDRVMVY+FHED+HGEV
Sbjct: 196 TLAGAVQSQKLAVRAISRLQSLPGGDIGALCDAVVEDVQRLTGYDRVMVYQFHEDDHGEV 255
Query: 250 VAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSL 309
V+E RR DLEPYLG HYPATDIPQA+RFL +N+VRMICDC A PVKV+Q ++L +PL L
Sbjct: 256 VSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNATPVKVVQSEELKRPLCL 315
Query: 310 CGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPR 369
STLRAPH CH +YM NMGSIASL +++ + + KLWGLVV HH SPR
Sbjct: 316 VNSTLRAPHSCHTQYMANMGSIASLALAIVVKGKDSS---------KLWGLVVGHHCSPR 366
Query: 370 FVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTP 429
+VPFPLRYACEFL+Q FG+Q+ E++L++QL EK +RTQT+LCDMLLRD+ IVTQ+P
Sbjct: 367 YVPFPLRYACEFLMQAFGLQLQMELQLTSQLAEKKAMRTQTLLCDMLLRDTVSAIVTQSP 426
Query: 430 NVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYH-RGSTGLSTDSLVEAGYP 488
+MDLVKCDGAALYY+GK WL+GVTP+E Q+KD+ WL+E H STGL+TDSLV+AGYP
Sbjct: 427 GIMDLVKCDGAALYYKGKCWLVGVTPSELQVKDLVNWLVENHGDDSTGLTTDSLVDAGYP 486
Query: 489 GALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKA 548
GA++ GDA+CG+AA I+SKD+L WFRS+TA +KWGGAKH KD +MHPRSSFKA
Sbjct: 487 GAISFGDAICGVAAAGISSKDYLLWFRSNTASAMKWGGAKHHPKNKDDAGRMHPRSSFKA 546
Query: 549 FLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRI 608
FLEV K RSLPWE E+DAIHSL+LI+R S S+ +++ V+ +EL
Sbjct: 547 FLEVAKSRSLPWEISEIDAIHSLRLIMRESFT-----SSRPVLSANVVE---RDANELTS 598
Query: 609 ITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVD 658
EMVR+IETA PI VD+SG +NGWN+K AE+TGL +A+G +L +
Sbjct: 599 FVCEMVRVIETATAPIFGVDSSGCINGWNNKTAEMTGLQASEAMGKSLAN 648
>gi|89331117|emb|CAJ80925.1| phytochrome A [Lamium purpureum]
Length = 608
Score = 757 bits (1955), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/521 (68%), Positives = 425/521 (81%), Gaps = 4/521 (0%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ L+ID EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG+I L
Sbjct: 1 SGKPFYAIIHRVTGSLIIDFEPVKPHEVPMTAAGALQSYKLAAKAINRLQSLPSGSIERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
CD +V EV +LTGYDRVMVYKFHED+HGEV E +P LEPY+G HYPATDIPQA+RFL
Sbjct: 61 CDTMVQEVFELTGYDRVMVYKFHEDDHGEVFTEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDC A VKVIQD L L+LCGSTLRAPH CH +YMENM SIASLVMSV
Sbjct: 121 MKNKVRMICDCRATHVKVIQDGNLPIDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 340 INEAEDE---LDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVEL 396
+NE ++E D+ E+ ++LWGLVVCHHT+PRFVPFPLRYACEFL QVF + VNKE EL
Sbjct: 181 VNEGDEEGSGSDSPPEKRKRLWGLVVCHHTTPRFVPFPLRYACEFLAQVFAIHVNKEFEL 240
Query: 397 SAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPT 456
+Q+ EK+ILRTQT+LCDMLLRD+P+GIV+Q+PNVMDLVKCDGAAL Y+GK + LG+TPT
Sbjct: 241 ESQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAALLYKGKKYRLGMTPT 300
Query: 457 EEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRS 516
+ QI+D+ WL EYHR STGLSTDSL +AG+PGALALGDA+CG+AAVKIT KD+LFWFRS
Sbjct: 301 DFQIRDVVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAICGMAAVKITDKDWLFWFRS 360
Query: 517 HTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILR 576
HTA E++WGGAKH+ G KD GRKMHPRSSFKAFLEVVK RS+PW+D EMDAIHSLQLILR
Sbjct: 361 HTASEVRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSIPWKDYEMDAIHSLQLILR 420
Query: 577 GSLQDEVAEDSKM-IVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNG 635
+ ++ D + +++ D +I+ I EL +T+EMVRLIETA+VPILAVD G VNG
Sbjct: 421 NAFKESGGTDVEARAIHMKLSDLQIDGIQELEAVTSEMVRLIETASVPILAVDVDGLVNG 480
Query: 636 WNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
WN+K A+LTGL+VD+AIG +DLV S V ML A
Sbjct: 481 WNTKIADLTGLSVDKAIGRHFLDLVEDSSAHTVNQMLKLAL 521
>gi|226235031|dbj|BAH47481.1| phytochrome E [Cardamine nipponica]
Length = 1116
Score = 756 bits (1953), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/669 (56%), Positives = 477/669 (71%), Gaps = 31/669 (4%)
Query: 19 SKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQR 73
SK AQ S+DA L DFD+S F+YS SV S ++V ++AYL +QR
Sbjct: 19 SKPQKSNTAQYSVDAGLFADFDQSVYSGKSFNYSKSV--ISPHNHVSDEHITAYLSNIQR 76
Query: 74 GRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDL----APHAVPNIEQQDALTLGIDVRTL 129
G L+QPFGC+IAV+E +F +LG SEN E L L + L +GID RTL
Sbjct: 77 GGLVQPFGCLIAVEEPSFRILGVSENCIEFLGLLSLDSTSQCAEFNNVKGL-IGIDARTL 135
Query: 130 FTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPV 189
F+ S A+L KAA+F E +LLNP+L+H KT+ KPFYAILHRID G+VIDLE D +
Sbjct: 136 FSPSSGASLSKAASFTENSLLNPVLVHSKTTQKPFYAILHRIDAGIVIDLEAAKSGDPAL 195
Query: 190 TAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEV 249
T AGA++S KLA +AISRLQSLP G+I LCD +V +V LTGYDRVMVY+FHED+HGEV
Sbjct: 196 TLAGAVQSQKLAVRAISRLQSLPGGDIGALCDTVVEDVQRLTGYDRVMVYQFHEDDHGEV 255
Query: 250 VAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSL 309
V+E RR DLEPYLG HYPATDIPQA+RFL +N+VRMICDC A PVKV+Q ++L +PL L
Sbjct: 256 VSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNATPVKVVQSEELKRPLCL 315
Query: 310 CGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPR 369
STLRAPH CH +YM NMGSIASL +++ + + KLWGLVV HH SPR
Sbjct: 316 VNSTLRAPHSCHTQYMANMGSIASLALAIVVKGKDSS---------KLWGLVVGHHCSPR 366
Query: 370 FVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTP 429
+VPFPLRYACEFL+Q FG+Q+ E++L++QL EK +RTQT+LCDMLLRD+ IVTQ+P
Sbjct: 367 YVPFPLRYACEFLMQAFGLQLQMELQLTSQLAEKKAMRTQTLLCDMLLRDTVSAIVTQSP 426
Query: 430 NVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYH-RGSTGLSTDSLVEAGYP 488
+MDLVKCDGAALYY+GK WL+GVTP+E Q+KD+ WL+E H STGL+TDSLV+AGYP
Sbjct: 427 GIMDLVKCDGAALYYKGKCWLVGVTPSELQVKDLVNWLVENHGDDSTGLTTDSLVDAGYP 486
Query: 489 GALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKA 548
GA++ GDA+CG+AA I+SKD+L WFRS+TA +KWGGAKH KD +MHPRSSFKA
Sbjct: 487 GAISFGDAICGVAAAGISSKDYLLWFRSNTASAMKWGGAKHHPKNKDDAGRMHPRSSFKA 546
Query: 549 FLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRI 608
FLE+ K RSLPWE E+DAIHSL+LI+R S S+ +++ V+ +EL
Sbjct: 547 FLEIAKSRSLPWEISEIDAIHSLRLIMRESFT-----SSRPVLSANVVE---RDANELTS 598
Query: 609 ITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDV 667
EMVR+IETA PI VD+SG +NGWN+K AE+TGL +A+G +L ++V +S
Sbjct: 599 FVCEMVRVIETATAPIFGVDSSGCINGWNNKTAEMTGLQASEAMGKSLANEIVQEESRAA 658
Query: 668 VKNMLSSAF 676
+++++ A
Sbjct: 659 LESLMCKAL 667
>gi|13383390|gb|AAK20958.1| phytochrome C [Asparagus falcatus]
Length = 444
Score = 756 bits (1951), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/446 (80%), Positives = 402/446 (90%), Gaps = 6/446 (1%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLV E+SDLTGYDR M
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVREISDLTGYDRXM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+DEHGEV+AECRR DLEPY+G HYPATDIPQASRFL MK+KVRMICDC A PVK+
Sbjct: 61 AYKFHDDEHGEVIAECRRSDLEPYIGLHYPATDIPQASRFLFMKSKVRMICDCSAHPVKI 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKL 357
IQDKKL QPLSLCGSTLRAPHGCHA+YM NMGS+ASLVMSVTINE +DE +DQ +GRKL
Sbjct: 121 IQDKKLAQPLSLCGSTLRAPHGCHAQYMSNMGSVASLVMSVTINEDDDESGSDQ-KGRKL 179
Query: 358 WGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLL 417
WGLVVCHHT+PRFVP PLRYACEFL+QVFG+Q+NKEVEL+AQ REKHILRTQTVLCDMLL
Sbjct: 180 WGLVVCHHTNPRFVPLPLRYACEFLLQVFGIQLNKEVELAAQAREKHILRTQTVLCDMLL 239
Query: 418 RDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGL 477
RD+P+GI TQTPNVMD+VKCDGAALYY+ ++W+LG TP E QI+DI+ WLLE H GSTGL
Sbjct: 240 RDAPIGIFTQTPNVMDIVKCDGAALYYKNQIWVLGTTPAEPQIRDISAWLLECHDGSTGL 299
Query: 478 STDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG- 536
STDSL+EAGYPGALALGDAVCG+AA+KIT KDF+FWFRSHTAKEIKWGGAKH+ +D
Sbjct: 300 STDSLMEAGYPGALALGDAVCGMAAIKITDKDFIFWFRSHTAKEIKWGGAKHEPANRDDE 359
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVA-EDSKMIVNVPS 595
GRK+ PRSSFKAFLEVVK RSLPWED+EMD++HSLQLILR SL +E+A +SK +VN +
Sbjct: 360 GRKLQPRSSFKAFLEVVKWRSLPWEDIEMDSVHSLQLILRESLHNEIAVGESKTLVN-ST 418
Query: 596 VDD--RIEKIDELRIITNEMVRLIET 619
+DD RI+ +DELR +TNEMVRLIET
Sbjct: 419 LDDMKRIQGMDELRAVTNEMVRLIET 444
>gi|226234977|dbj|BAH47478.1| phytochrome E [Cardamine nipponica]
gi|226235027|dbj|BAH47479.1| phytochrome E [Cardamine nipponica]
Length = 1116
Score = 755 bits (1950), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/669 (55%), Positives = 477/669 (71%), Gaps = 31/669 (4%)
Query: 19 SKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQR 73
SK AQ S+DA L DFD+S F+YS SV S ++V ++AYL +QR
Sbjct: 19 SKPQKSNTAQYSVDAGLFADFDQSVYSGKSFNYSKSV--ISPHNHVSDEHITAYLSNIQR 76
Query: 74 GRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDL----APHAVPNIEQQDALTLGIDVRTL 129
G L+QPFGC+IAV+E +F +LG SEN E L L + L +GID RTL
Sbjct: 77 GGLVQPFGCLIAVEEPSFRILGVSENCIEFLGLLSLDSTSQCAEFNNVKGL-IGIDARTL 135
Query: 130 FTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPV 189
F+ S A+L KAA+F E++LLNP+L+H KT+ KPFYAILHRID G+VIDLE D +
Sbjct: 136 FSPSSGASLSKAASFTEISLLNPVLVHSKTTQKPFYAILHRIDAGIVIDLEAAKSGDPAL 195
Query: 190 TAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEV 249
T AGA++S KLA +AISRLQSLP G+I LCD +V +V LTGYDRVMVY+FHED+HGEV
Sbjct: 196 TLAGAVQSQKLAVRAISRLQSLPGGDIGALCDTVVEDVQRLTGYDRVMVYQFHEDDHGEV 255
Query: 250 VAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSL 309
V+E RR DLEPYLG HYPATDIPQA+RFL +N+VRMICDC A VKV+Q ++L +PL L
Sbjct: 256 VSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNATSVKVVQSEELKRPLCL 315
Query: 310 CGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPR 369
STLRAPH CH +YM NMGSIASL +++ + + KLWGLVV HH SPR
Sbjct: 316 VNSTLRAPHSCHTQYMANMGSIASLALAIVVKGKDSS---------KLWGLVVGHHCSPR 366
Query: 370 FVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTP 429
+VPFPLRYACEFL+Q FG+Q+ E++L++QL EK +RTQT+LCDMLLRD+ IVTQ+P
Sbjct: 367 YVPFPLRYACEFLMQAFGLQLQMELQLTSQLAEKKAMRTQTLLCDMLLRDTVSAIVTQSP 426
Query: 430 NVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYH-RGSTGLSTDSLVEAGYP 488
+MDLVKCDGAALYY+GK WL+GVTP+E Q+KD+ WL+E H STGL+TDSLV+AGYP
Sbjct: 427 GIMDLVKCDGAALYYKGKCWLVGVTPSELQVKDLVNWLVENHGDDSTGLTTDSLVDAGYP 486
Query: 489 GALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKA 548
GA++ GDA+CG+AA I+SKD+L WFRS+TA +KWGGAKH KD +MHPRSSFKA
Sbjct: 487 GAISFGDAICGVAAAGISSKDYLLWFRSNTASAMKWGGAKHHPKNKDDAGRMHPRSSFKA 546
Query: 549 FLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRI 608
FLE+ K RSLPWE E+DAIHSL+LI+R S S+ +++ V+ +EL
Sbjct: 547 FLEIAKSRSLPWEISEIDAIHSLRLIMRESFT-----SSRPVLSANVVE---RDANELTS 598
Query: 609 ITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDV 667
EMVR+IETA PI VD+SG +NGWN+K AE+TGL +A+G +L ++V +S
Sbjct: 599 FVCEMVRVIETATAPIFGVDSSGCINGWNNKTAEMTGLQASEAMGKSLANEIVQEESRAA 658
Query: 668 VKNMLSSAF 676
+++++ A
Sbjct: 659 LESLMCKAL 667
>gi|89330108|emb|CAJ80966.1| phytochrome A [Penstemon cobaea]
Length = 607
Score = 755 bits (1949), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/520 (69%), Positives = 424/520 (81%), Gaps = 3/520 (0%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ L+ID EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ L
Sbjct: 1 SGKPFYAIIHRVTGSLIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
CD +V EV +LTGYDRVM+YKFH+D+HGEV +E +P EPY+G HYPATDIPQA+RFL
Sbjct: 61 CDTMVQEVFELTGYDRVMIYKFHDDDHGEVFSEVTKPGHEPYVGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDC A VKV+QD+KL L+LCGSTLRAPHGCH +YMENM SIASLVMSV
Sbjct: 121 MKNKVRMICDCRAKHVKVVQDEKLSFDLTLCGSTLRAPHGCHLQYMENMSSIASLVMSVV 180
Query: 340 INEA-EDELDNDQEQGRK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELS 397
+NE ED D+ Q RK LWGLVVCHHTSPRFVPFPLRYACEFL QVF + VNKE+EL
Sbjct: 181 VNEGDEDGPDSVIPQKRKRLWGLVVCHHTSPRFVPFPLRYACEFLAQVFAIHVNKELELE 240
Query: 398 AQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTE 457
Q+ EK+ILRTQT+LCDMLLRD+P+GIV+Q+PNVMDLVKCDGAAL Y+ K + +G+TPT+
Sbjct: 241 NQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAALMYKNKKYKMGLTPTD 300
Query: 458 EQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSH 517
QI+DI WL YHR STGLSTDSL +AGYPGALALGDAVCG+AAVKI+ +D+LFWFRSH
Sbjct: 301 FQIRDIVSWLDAYHRDSTGLSTDSLYDAGYPGALALGDAVCGMAAVKISDEDWLFWFRSH 360
Query: 518 TAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRG 577
TA EI+WGGAKH+ G KD GRKMHPRSSFKAFLEVVK RSLP++D EMDAIHSLQLILR
Sbjct: 361 TAAEIRWGGAKHEQGEKDDGRKMHPRSSFKAFLEVVKTRSLPFKDYEMDAIHSLQLILRN 420
Query: 578 SLQD-EVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGW 636
+ +D E AE ++ D RI+ + EL +T+EMVRLIETA+VPILAVD G VNGW
Sbjct: 421 AFKDGENAEADTKAIHTRLTDLRIDGMQELEAVTSEMVRLIETASVPILAVDVEGYVNGW 480
Query: 637 NSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
NSK A+LTGL VD+AIG ++LV S D V ML A
Sbjct: 481 NSKIADLTGLRVDEAIGKQFLELVEDSSTDSVSKMLKLAL 520
>gi|226234975|dbj|BAH47477.1| phytochrome E [Cardamine nipponica]
Length = 1116
Score = 755 bits (1949), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/669 (55%), Positives = 477/669 (71%), Gaps = 31/669 (4%)
Query: 19 SKQNARVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPSSTVSAYLQRVQR 73
SK AQ S+DA L DFD+S F+YS SV S ++V ++AYL +QR
Sbjct: 19 SKPQKSNTAQYSVDAGLFADFDQSVYSGKSFNYSKSV--ISPHNHVSDEHITAYLSNIQR 76
Query: 74 GRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDL----APHAVPNIEQQDALTLGIDVRTL 129
G L+QPFGC+IAV+E +F +LG SEN E L L + L +GID RTL
Sbjct: 77 GGLVQPFGCLIAVEEPSFRILGVSENCIEFLGLLSLDSTSQCAEFNNVKGL-IGIDARTL 135
Query: 130 FTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLEPVNPDDVPV 189
F+ S A+L KAA+F E++LLNP+L+H KT+ KPFYAILHRID G+VIDLE D +
Sbjct: 136 FSPSSGASLSKAASFTEISLLNPVLVHSKTTQKPFYAILHRIDAGIVIDLEAAKSGDPAL 195
Query: 190 TAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEV 249
T AGA++S KLA +AISRLQSLP G+I LCD +V +V LTGYDRVMVY+FHED+HGEV
Sbjct: 196 TLAGAVQSQKLAVRAISRLQSLPGGDIGALCDTVVEDVQRLTGYDRVMVYQFHEDDHGEV 255
Query: 250 VAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSL 309
V+E RR DLEPYLG HYPATDIPQA+RFL +N+VRMICDC A VKV+Q ++L +PL L
Sbjct: 256 VSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNATSVKVVQSEELKRPLCL 315
Query: 310 CGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPR 369
STLRAPH CH +YM NMGSIASL +++ + + KLWGLVV HH SPR
Sbjct: 316 VNSTLRAPHSCHTQYMANMGSIASLALAIVVKGKDSS---------KLWGLVVGHHCSPR 366
Query: 370 FVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTP 429
+VPFPLRYACEFL+Q FG+Q+ E++L++QL EK +RTQT+LCDMLLRD+ IVTQ+P
Sbjct: 367 YVPFPLRYACEFLMQAFGLQLQMELQLTSQLAEKKAMRTQTLLCDMLLRDTVSAIVTQSP 426
Query: 430 NVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYH-RGSTGLSTDSLVEAGYP 488
+MDLVKCDGAALYY+GK WL+GVTP+E Q+KD+ WL+E H STGL+TDSLV+AGYP
Sbjct: 427 GIMDLVKCDGAALYYKGKCWLVGVTPSELQVKDLVNWLVENHGDDSTGLTTDSLVDAGYP 486
Query: 489 GALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKA 548
GA++ GDA+CG+AA I+SKD+L WFRS+TA +KWGGAKH KD +MHPRSSFKA
Sbjct: 487 GAISFGDAICGVAAAGISSKDYLLWFRSNTASAMKWGGAKHHPKNKDDAGRMHPRSSFKA 546
Query: 549 FLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRI 608
FLE+ K RSLPWE E+DAIHSL+LI+R S S+ +++ V+ +EL
Sbjct: 547 FLEIAKSRSLPWEISEIDAIHSLRLIMRESFT-----SSRPVLSANVVE---RDANELTS 598
Query: 609 ITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDV 667
EMVR+IETA PI VD+SG +NGWN+K AE+TGL +A+G +L ++V +S
Sbjct: 599 FVCEMVRVIETATAPIFGVDSSGCINGWNNKTAEMTGLQASEAMGKSLANEIVQEESRAA 658
Query: 668 VKNMLSSAF 676
+++++ A
Sbjct: 659 LESLMCKAL 667
>gi|13383440|gb|AAK20983.1| phytochrome C [Pteridophyllum racemosum]
Length = 461
Score = 755 bits (1949), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/461 (77%), Positives = 402/461 (87%), Gaps = 1/461 (0%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAILHRIDVG VIDLEPVNP DVPVTAAGALK YKLAAKAISRLQSLPSGNISLL
Sbjct: 1 SGKPFYAILHRIDVGFVIDLEPVNPLDVPVTAAGALKPYKLAAKAISRLQSLPSGNISLL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
CDVL EVS+LTGYDRVMVYKFHEDEHGEVV+ECR+ DLE Y G HYPATDIPQASRFL
Sbjct: 61 CDVLAREVSELTGYDRVMVYKFHEDEHGEVVSECRKIDLESYRGLHYPATDIPQASRFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKN+ R+ICDC A PVKVIQD+KL QPLSLCGSTLRAPHGCHA+YM NMGSIASLVM VT
Sbjct: 121 MKNRARIICDCSATPVKVIQDEKLAQPLSLCGSTLRAPHGCHAQYMANMGSIASLVMFVT 180
Query: 340 INEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQ 399
IN+ +D++ + +GRKLWGLVVCHHTS RFVP+PLRYACEFLIQVFG+Q+NKEVEL+ Q
Sbjct: 181 INDDDDDIKIETHKGRKLWGLVVCHHTSSRFVPYPLRYACEFLIQVFGIQLNKEVELAVQ 240
Query: 400 LREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQ 459
REK ILRTQT+LCDMLLRDSPVGIVTQ+PNVMDLV+CDGAALY+R K WLLGV PTE+Q
Sbjct: 241 SREKRILRTQTLLCDMLLRDSPVGIVTQSPNVMDLVRCDGAALYFRNKFWLLGVPPTEKQ 300
Query: 460 IKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTA 519
I+DI WL+E++ G+TGLSTDSL+EAGYP + LGDAVCG+AA+ TSKDFLFWFRS TA
Sbjct: 301 IRDIVGWLMEHYVGTTGLSTDSLMEAGYPDSSVLGDAVCGMAAINFTSKDFLFWFRSQTA 360
Query: 520 KEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSL 579
KE+KWGGAKHD D RKM+PRSSF AFLEVVK RSLPWEDVEMDAIHSLQLILR S+
Sbjct: 361 KELKWGGAKHDPVDMDDVRKMNPRSSFNAFLEVVKWRSLPWEDVEMDAIHSLQLILRESM 420
Query: 580 QDEVAEDSKMIVN-VPSVDDRIEKIDELRIITNEMVRLIET 619
++E+ D K IVN P +D R+ +D+L ++T EMV L+ET
Sbjct: 421 KNEIVNDVKTIVNTTPVIDARLRGMDQLCVVTGEMVSLMET 461
>gi|89331077|emb|CAJ80905.1| phytochrome A [Chelone obliqua]
Length = 615
Score = 754 bits (1948), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/520 (68%), Positives = 425/520 (81%), Gaps = 3/520 (0%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ L+ID EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ L
Sbjct: 1 SGKPFYAIIHRVTGSLIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
CD +V E +LTGYDRVM+YKFH+D+HGEV +E +P LEPY+G HYPATDIPQA+RFL
Sbjct: 61 CDTMVQEAFELTGYDRVMIYKFHDDDHGEVFSEVTKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDC A VKV+QD+KL L+LCGSTLRAPH CH +YMENM SIASLVMSV
Sbjct: 121 MKNKVRMICDCRAKHVKVVQDEKLSFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 340 INEA-EDELDNDQEQGRK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELS 397
+NE ED ++ Q RK LWGLVVCH+TSPRF+PFPLRYACEFL QVF + VNKE+EL
Sbjct: 181 VNEGDEDGSESVHPQKRKRLWGLVVCHNTSPRFIPFPLRYACEFLAQVFAIHVNKELELE 240
Query: 398 AQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTE 457
Q+ EK+ILRTQT+LCDMLLRD+P+GIV+Q+PNVMDLVKCDGAAL Y+ K + +G+TPT+
Sbjct: 241 NQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAALMYKNKKYKMGLTPTD 300
Query: 458 EQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSH 517
QI+DI WL EYHR STGLSTDSL +AG+PGALALGDA+CG+AAVKI+ +D+LFWFRSH
Sbjct: 301 FQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAICGMAAVKISERDWLFWFRSH 360
Query: 518 TAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRG 577
TA EI+WGGAKH+ G KD GRKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR
Sbjct: 361 TAAEIRWGGAKHEQGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRN 420
Query: 578 SLQD-EVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGW 636
+ +D E A+ ++ D RI+ + EL +T+EMVRLIETA+VPILAVD G+VNGW
Sbjct: 421 AFKDGENADSDTKAIHTRLTDLRIDGMQELEAVTSEMVRLIETASVPILAVDVDGHVNGW 480
Query: 637 NSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
NSK A+LTGL VD+AIG ++LV S D V ML A
Sbjct: 481 NSKIADLTGLPVDEAIGKQFLELVEDSSTDTVSKMLKLAL 520
>gi|296091|emb|CAA34936.1| phytochrome [Ceratodon purpureus]
Length = 502
Score = 753 bits (1945), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/501 (70%), Positives = 416/501 (83%), Gaps = 1/501 (0%)
Query: 51 NISSSTSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHA 110
++ S +VP+ V+AYLQR+QR LIQ FGCM+AV+E NF V+ YSENA E LDL P A
Sbjct: 2 SVGQSAESVPAGAVTAYLQRMQREGLIQNFGCMVAVEEPNFCVIAYSENASEFLDLIPQA 61
Query: 111 VPNIEQQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHR 170
VP++ + D L +G D+RTLFT S +AAL+KAA +++LLNPI +HC+ SGKP YAI HR
Sbjct: 62 VPSMGEMDVLGIGTDIRTLFTPSSSAALEKAAATQDISLLNPITVHCRRSGKPLYAIAHR 121
Query: 171 IDVGLVIDLEPVNPDDVPVTAA-GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSD 229
ID+G+VID E V DVPV+AA GAL+S+KLAA+AI+RLQ+LP G+I LLCD +V EV +
Sbjct: 122 IDIGIVIDFEAVKMIDVPVSAAAGALQSHKLAARAITRLQALPGGDIELLCDTIVEEVRE 181
Query: 230 LTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICD 289
LTGYDRVM +KFHEDEHGEVVAE RR DLEPY+G HYPATDIPQASRFL+MKN+VR+I D
Sbjct: 182 LTGYDRVMAFKFHEDEHGEVVAEIRRMDLEPYMGLHYPATDIPQASRFLLMKNRVRLIAD 241
Query: 290 CLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN 349
C A PVK+IQD + QP+SL GSTLRAPHGCHA+YM NMGSIASLVM+V IN+ E+
Sbjct: 242 CYASPVKLIQDPDIRQPVSLAGSTLRAPHGCHAQYMGNMGSIASLVMAVIINDNEEYSRG 301
Query: 350 DQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQ 409
++GRKLWGLVVC HTSPR VPFPLR CEFL+QVFG+Q+N VEL+AQLREKHILRTQ
Sbjct: 302 AIQRGRKLWGLVVCQHTSPRTVPFPLRSVCEFLMQVFGMQLNLHVELAAQLREKHILRTQ 361
Query: 410 TVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLE 469
T+LCDMLLRD+P+GIV+QTPN+MDLVKCDGAALYY ++WLLG TPTE QIK+IA+WLLE
Sbjct: 362 TLLCDMLLRDAPIGIVSQTPNIMDLVKCDGAALYYGKRVWLLGTTPTENQIKEIADWLLE 421
Query: 470 YHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKH 529
+H STGLSTDSL +A YPGA LGDAVCG+AA KIT+KDFLF FRSHTA E+KWGGAKH
Sbjct: 422 HHNDSTGLSTDSLADANYPGAHLLGDAVCGMAAAKITAKDFLFLFRSHTATEVKWGGAKH 481
Query: 530 DSGGKDGGRKMHPRSSFKAFL 550
D KD GRKM PRSSFKAFL
Sbjct: 482 DPDEKDDGRKMXPRSSFKAFL 502
>gi|89330150|emb|CAJ80987.1| phytochrome A [Strobilanthes attenuata]
Length = 607
Score = 753 bits (1944), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/522 (68%), Positives = 424/522 (81%), Gaps = 7/522 (1%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ GL+ID EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ L
Sbjct: 1 SGKPFYAIIHRVTGGLIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
CD +V EV +LTGYDRVM+YKFH+D+HGEV +E +P LEPY G HYPATDIPQA+RFL
Sbjct: 61 CDTMVQEVFELTGYDRVMIYKFHDDDHGEVFSEVTKPGLEPYSGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDC A V V+QD+KL L+LCGSTLRAPH CH +YMENM SIASLVMSV
Sbjct: 121 MKNKVRMICDCRANHVNVVQDEKLTLDLTLCGSTLRAPHSCHLQYMENMISIASLVMSVV 180
Query: 340 INEAEDELDNDQ--EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELS 397
+NE ++E N E+ ++LWGLVVCHH+SPRFVPFPLRYACEFL QVF + VNKE+EL
Sbjct: 181 VNEGDEEASNSSQPEKRKRLWGLVVCHHSSPRFVPFPLRYACEFLAQVFAIHVNKELELE 240
Query: 398 AQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTE 457
Q+ EK+ILRTQT+LCDML+RD+P+GIV+Q+PNVMDLVKCDGA L Y+GK++ LG++P +
Sbjct: 241 NQMLEKNILRTQTLLCDMLMRDAPLGIVSQSPNVMDLVKCDGAVLLYKGKMYRLGLSPID 300
Query: 458 EQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSH 517
Q +DI WL EYHR STGLSTDSL +AG+PGAL+LGDAVCG+AAVKIT KD+LFWFRSH
Sbjct: 301 FQTRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALSLGDAVCGMAAVKITDKDWLFWFRSH 360
Query: 518 TAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRG 577
TA EI+WGGAKH+ KD GRKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR
Sbjct: 361 TAAEIRWGGAKHEPSEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRN 420
Query: 578 SLQDEVAEDSKMIVNVPSV---DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVN 634
+ ++ AE M NV D +I+ I EL +T+EMVRLIETA+VPILAVD G VN
Sbjct: 421 AFKE--AEGDNMEANVIHTRLSDLQIDGIQELEAVTSEMVRLIETASVPILAVDVDGLVN 478
Query: 635 GWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
GWN+K A+LTGLTVD+AIG + LV S D+V ML A
Sbjct: 479 GWNTKIADLTGLTVDKAIGRHFIGLVEESSADIVSKMLELAL 520
>gi|89331027|emb|CAJ80880.1| phytochrome A [Ajuga reptans]
Length = 608
Score = 751 bits (1940), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/522 (68%), Positives = 426/522 (81%), Gaps = 6/522 (1%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ L+ID EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ L
Sbjct: 1 SGKPFYAIIHRVTGSLIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
CD +V EV +LTGYDRVM+YKFH+D+HGEV AE +PDLEPY+G HYPATDIPQA+RFL
Sbjct: 61 CDTMVQEVFELTGYDRVMIYKFHDDDHGEVFAEVTKPDLEPYVGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDC A VKV+QD+ L L+LCGSTLRAPH CH +YMENM SIASLVMSV
Sbjct: 121 MKNKVRMICDCKANHVKVVQDENLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 340 INEAEDELDNDQ---EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVEL 396
+NE +E ++ E+ ++LWGLVVCH TSPRFVPFPLRYACEFL QVF + VNKE+EL
Sbjct: 181 VNEGNEEGGSESTHPEKRKRLWGLVVCHLTSPRFVPFPLRYACEFLAQVFAIHVNKELEL 240
Query: 397 SAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPT 456
Q+ EK+ILRTQT+LCDMLLRD+P+GIV+Q+PNVMDLVKCDGAAL Y+ K + LG+TPT
Sbjct: 241 ENQMMEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAALLYKNKKYKLGLTPT 300
Query: 457 EEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRS 516
+ QI+D+ WL EYHR STGLSTDSL +AG+PGALALG AVCG+AAVKI KD+LFWFRS
Sbjct: 301 DFQIRDVVSWLDEYHRDSTGLSTDSLYDAGFPGALALGHAVCGMAAVKINDKDWLFWFRS 360
Query: 517 HTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILR 576
HTA EI+WGGAKH+ G KD GRKMHPRSSF+AFLE VK RSLPW+D EMDAIHSLQLILR
Sbjct: 361 HTASEIRWGGAKHEPGEKDDGRKMHPRSSFRAFLEAVKTRSLPWKDYEMDAIHSLQLILR 420
Query: 577 GSLQ--DEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVN 634
+ + D+ D+KMI + D +I+ I EL +T+EMVRLIETA+VPILAVDA G VN
Sbjct: 421 NAFKEADDKDTDTKMI-HTKLNDLQIDGIQELEAVTSEMVRLIETASVPILAVDADGLVN 479
Query: 635 GWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
GWN+K A+LT L VD+AIG +DLV S D+V +ML A
Sbjct: 480 GWNTKIADLTSLPVDKAIGRHFLDLVEDTSADIVSHMLQLAL 521
>gi|89331107|emb|CAJ80920.1| phytochrome A [Glechoma hederacea]
Length = 607
Score = 748 bits (1932), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/520 (68%), Positives = 420/520 (80%), Gaps = 3/520 (0%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ L+ID EPV P +VP+TAAGAL+SYKLAAKAI+RLQ+LPSG+I L
Sbjct: 1 SGKPFYAIIHRVTGSLIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALPSGSIERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
CD + EV +LTGYDRVM+YKFHED+HGEV E R+P LEPY+G HYPATDIPQA+RFL
Sbjct: 61 CDTMSQEVFELTGYDRVMIYKFHEDDHGEVFTEIRKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDC A VKV+QD+ L L+LCGSTLRAPH CH +YMENM SIASLVMS+
Sbjct: 121 MKNKVRMICDCRANHVKVVQDENLPLELTLCGSTLRAPHSCHLQYMENMNSIASLVMSIV 180
Query: 340 INEAEDELDNDQ--EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELS 397
+NE E+E + ++ ++LWGLVVCHHTSPRFVPFPLRYACEFL QVF + VNKE+EL
Sbjct: 181 VNEGEEEGSDSTHPDKRKRLWGLVVCHHTSPRFVPFPLRYACEFLTQVFAIHVNKELELE 240
Query: 398 AQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTE 457
Q+ EK+ILRTQT+LCDMLLRD+P+GIV+Q+PNVMDLVKCDGAAL Y+ K + LG+TP +
Sbjct: 241 NQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAALLYKNKKYRLGMTPGD 300
Query: 458 EQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSH 517
QI+D+ WL EYHR STGLSTDSL +AG+PGALALGDAVCG+AAVKIT KD+LFWFRSH
Sbjct: 301 FQIRDVVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVKITDKDWLFWFRSH 360
Query: 518 TAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRG 577
TA E++WGGAKH+ KD GRKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR
Sbjct: 361 TAAEVRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRN 420
Query: 578 SL-QDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGW 636
S +DE + ++ D +IE I EL +T+EMVRLIETA+VPILAVD G VNGW
Sbjct: 421 SYKEDEDTDTYAKAIHTRLSDLQIEGIQELEAVTSEMVRLIETASVPILAVDVDGMVNGW 480
Query: 637 NSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
+K A+LTGL VD+AIG + LV S D V +ML A
Sbjct: 481 YTKIADLTGLPVDKAIGCHFLSLVEESSADAVSSMLELAL 520
>gi|39753833|gb|AAR30464.1| PHYC [Dissiliaria muelleri]
Length = 391
Score = 746 bits (1927), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/391 (87%), Positives = 371/391 (94%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLV EVSDLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVKEVSDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VY+FHEDEHGEVVAECR+PDLEPYLG HYPATDIPQ+SRFL MKNKVRMICDC+APPV+V
Sbjct: 61 VYRFHEDEHGEVVAECRQPDLEPYLGLHYPATDIPQSSRFLFMKNKVRMICDCMAPPVEV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKL 357
+QD++L QPLSLCGSTLR+PHGCHA+YM NMGS+ASLVMSVTINE +DE+D DQ+ GRKL
Sbjct: 121 VQDERLSQPLSLCGSTLRSPHGCHAQYMANMGSVASLVMSVTINEDDDEMDGDQQTGRKL 180
Query: 358 WGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLL 417
WGLVVCHHT PRFVPFPLRYACEFL+QVFGVQ+NKEVEL+AQ+REKHILRTQTVLCDMLL
Sbjct: 181 WGLVVCHHTCPRFVPFPLRYACEFLVQVFGVQINKEVELAAQMREKHILRTQTVLCDMLL 240
Query: 418 RDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGL 477
RD+PVGI+TQ+PNVMDLVKCDGAALYYR K WLLGVTPTE +I+DIAEWLLE H GSTGL
Sbjct: 241 RDAPVGIITQSPNVMDLVKCDGAALYYRKKFWLLGVTPTEAEIRDIAEWLLECHSGSTGL 300
Query: 478 STDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGG 537
STDSL+EAGYPGA LGDAVCG+AAV+ITSKDFLFWFRSHTAKEIKWGGAKHD G KD G
Sbjct: 301 STDSLMEAGYPGASILGDAVCGMAAVRITSKDFLFWFRSHTAKEIKWGGAKHDPGDKDDG 360
Query: 538 RKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
RKMHPRSSFKAFLEVVK+RSLPWEDVEMDAI
Sbjct: 361 RKMHPRSSFKAFLEVVKRRSLPWEDVEMDAI 391
>gi|89330092|emb|CAJ80958.1| phytochrome A [Paulownia tomentosa]
Length = 607
Score = 746 bits (1925), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/522 (68%), Positives = 424/522 (81%), Gaps = 7/522 (1%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ L++D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ L
Sbjct: 1 SGKPFYAIIHRVTGSLIVDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
CD +V EV +LTGYDRVM+YKFH+D+HGEV E +P LEPY G HYPATDIPQA+RFL
Sbjct: 61 CDTMVQEVFELTGYDRVMIYKFHDDDHGEVFTEITKPGLEPYAGLHYPATDIPQAARFLS 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDC A VKV+QD+ L L+LCGSTLRAPH CH +YMENM SIASLVMS
Sbjct: 121 MKNKVRMICDCRANHVKVVQDENLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSAV 180
Query: 340 INEAEDELDNDQ--EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELS 397
+NE ++E + E+ ++LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKE+EL
Sbjct: 181 VNEGDEEGSDSSHPEKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELE 240
Query: 398 AQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTE 457
Q+ EK+ILRTQT+LCDMLLRD+P+GIV+Q+PNVMDLVKCDGAAL Y+ K + LG+TP++
Sbjct: 241 NQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAALLYKNKKYRLGLTPSD 300
Query: 458 EQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSH 517
QI+DI WL EYHR STGLSTDSL +AG+PGALALGDAVCG+AAV+IT KD+LFWFRSH
Sbjct: 301 FQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITDKDWLFWFRSH 360
Query: 518 TAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRG 577
TA EI+WGGAKH+ GGKD GRKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR
Sbjct: 361 TAAEIRWGGAKHEPGGKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRN 420
Query: 578 SLQDEVAEDSKM---IVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVN 634
+ ++ AED+ + ++ D +IE I EL +T+EMVRLIETA+VPILAVD G VN
Sbjct: 421 AFKE--AEDTDLGSKAIHTRLNDLQIEGIQELEAVTSEMVRLIETASVPILAVDVDGLVN 478
Query: 635 GWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
GWN+K A+LTGL VD+AIG + LV S D V ML A
Sbjct: 479 GWNTKIADLTGLPVDKAIGRHFLALVEDSSADTVSKMLELAL 520
>gi|21069971|gb|AAM34144.1| phytochrome C [Androstachys johnsonii]
Length = 391
Score = 744 bits (1921), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/391 (87%), Positives = 370/391 (94%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLV EVSDLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVKEVSDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVVAECRRPDLEPYLG HYPATDIPQASRFL MKNKVRMICDCLAPPV+V
Sbjct: 61 VYKFHEDEHGEVVAECRRPDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCLAPPVEV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKL 357
+QD KL QPL LCGSTLR+PHGCH++YM NMG+IASLVMSVTINE +DE++ DQ++GRKL
Sbjct: 121 VQDGKLSQPLGLCGSTLRSPHGCHSQYMRNMGTIASLVMSVTINENDDEMEGDQQKGRKL 180
Query: 358 WGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLL 417
WGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQ+NKEVEL+AQ+REKHILRTQT+LCDMLL
Sbjct: 181 WGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQINKEVELAAQMREKHILRTQTLLCDMLL 240
Query: 418 RDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGL 477
R++PV I+TQ+PNVMDLVKCDGAALYYR K WLLG+TPTE QI+DIAEWLLEYH G+TGL
Sbjct: 241 RNAPVAIITQSPNVMDLVKCDGAALYYRKKFWLLGITPTEAQIRDIAEWLLEYHSGTTGL 300
Query: 478 STDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGG 537
STDSL+EAGYPGA LGDAVCG+AAV+ITSKDFLFWFRSHTAKEIKWGGAKHD K+ G
Sbjct: 301 STDSLMEAGYPGASILGDAVCGMAAVRITSKDFLFWFRSHTAKEIKWGGAKHDPNDKEDG 360
Query: 538 RKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
RKMHPRSSFKAFLEVVK+RSLPWED+EMDAI
Sbjct: 361 RKMHPRSSFKAFLEVVKRRSLPWEDMEMDAI 391
>gi|39753883|gb|AAR30489.1| PHYC [Peridiscus lucidus]
Length = 391
Score = 741 bits (1912), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/391 (88%), Positives = 368/391 (94%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLV EVSDLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVKEVSDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVVAEC RPDLEPYLG HYPATDIPQASRFL MKNKVRMICDCLA PVKV
Sbjct: 61 VYKFHEDEHGEVVAECCRPDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCLALPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKL 357
IQDK+L QPLSLCGSTLR+PHGCHA+YM NMGSIASLV+SVTINE ++E+++ Q++GRKL
Sbjct: 121 IQDKRLAQPLSLCGSTLRSPHGCHAQYMANMGSIASLVISVTINEEDEEMESSQQRGRKL 180
Query: 358 WGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLL 417
WGLVVCHH SPRFVPFPLRYACEFLIQVFGVQ+NKEVEL+AQL+EKHIL+TQTVLCDMLL
Sbjct: 181 WGLVVCHHASPRFVPFPLRYACEFLIQVFGVQINKEVELAAQLKEKHILQTQTVLCDMLL 240
Query: 418 RDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGL 477
RD+PVGI+TQ+PNVMDLVKCDGAALYYR K WLLGVTPTE QIK IAEWLLEYH GSTGL
Sbjct: 241 RDAPVGILTQSPNVMDLVKCDGAALYYREKFWLLGVTPTEVQIKTIAEWLLEYHSGSTGL 300
Query: 478 STDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGG 537
STDSL EAGYPGA LGDAVCG+AAVKITSKDFLFWFRSHTAKEIKWGGAKHD KD G
Sbjct: 301 STDSLTEAGYPGASILGDAVCGMAAVKITSKDFLFWFRSHTAKEIKWGGAKHDPSDKDDG 360
Query: 538 RKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
RKMHPRSSFKAFLEVVK+RSLPWED+EMDAI
Sbjct: 361 RKMHPRSSFKAFLEVVKRRSLPWEDMEMDAI 391
>gi|51320435|gb|AAU00368.1| phytochrome [Liquidambar styraciflua]
Length = 391
Score = 740 bits (1911), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/391 (88%), Positives = 368/391 (94%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLV EVSDLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVKEVSDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEV+AECRRPDLEP LG HYPATDIPQASRFL MKNKVRMICDCLAPPVKV
Sbjct: 61 VYKFHEDEHGEVLAECRRPDLEPCLGLHYPATDIPQASRFLFMKNKVRMICDCLAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKL 357
QDK+L +PLSLCGSTLR+PHGCHA+YM NMGSIASLVMSVTINE +DE+++DQ++GRKL
Sbjct: 121 NQDKRLTRPLSLCGSTLRSPHGCHAQYMANMGSIASLVMSVTINEDDDEMESDQQKGRKL 180
Query: 358 WGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLL 417
WGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQ+NKEVEL+ QLREKH+LRTQTVLCDMLL
Sbjct: 181 WGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQINKEVELATQLREKHMLRTQTVLCDMLL 240
Query: 418 RDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGL 477
RD+PVGIVTQ+PNVMDLVKCDGAALYYR K WLLGVTP E QI+DIA+WLLE H GSTGL
Sbjct: 241 RDAPVGIVTQSPNVMDLVKCDGAALYYRKKFWLLGVTPAEAQIRDIAQWLLEDHNGSTGL 300
Query: 478 STDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGG 537
STDSLVEAGYP AL LGDA CG+AA++ITSKDFLFWFRSHTAKEIKWGGAKHD KD G
Sbjct: 301 STDSLVEAGYPDALILGDAACGMAAIRITSKDFLFWFRSHTAKEIKWGGAKHDPDEKDDG 360
Query: 538 RKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
RKMHPRSSFKAFLEVVK+RSLPWEDVEMDAI
Sbjct: 361 RKMHPRSSFKAFLEVVKRRSLPWEDVEMDAI 391
>gi|39753885|gb|AAR30490.1| PHYC [Petalostigma pubescens]
Length = 391
Score = 738 bits (1905), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/391 (87%), Positives = 366/391 (93%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLV EVS+LTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVKEVSELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VY+FHEDEHGEVVAEC RPDLEPYLG HYPATDIPQASRFL MKNKVRMICDC+APPV+V
Sbjct: 61 VYRFHEDEHGEVVAECCRPDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCMAPPVEV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKL 357
+QD++L QPLSLCGSTLR+PHGCHA+YM NMG IASLVMSVTINE DE+D DQ+ GRKL
Sbjct: 121 VQDERLSQPLSLCGSTLRSPHGCHAQYMANMGLIASLVMSVTINEDNDEMDGDQQTGRKL 180
Query: 358 WGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLL 417
WGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQ+NKEVEL+ Q+REKHILRTQTVLCDMLL
Sbjct: 181 WGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQINKEVELAVQMREKHILRTQTVLCDMLL 240
Query: 418 RDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGL 477
RD+PV I+TQ+PNVMDLVKCDGAALYYR K WLLGVTPTE Q++DIAEWLLE H GSTGL
Sbjct: 241 RDAPVAIITQSPNVMDLVKCDGAALYYRKKFWLLGVTPTEAQVRDIAEWLLECHSGSTGL 300
Query: 478 STDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGG 537
STDSL+EAGYPGA LGDAVCG+AAV+ITSKDFLFWFRSHTAKEIKWGGAKHD G KD G
Sbjct: 301 STDSLMEAGYPGASILGDAVCGMAAVRITSKDFLFWFRSHTAKEIKWGGAKHDPGDKDDG 360
Query: 538 RKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
RK+HPRSSF AFLEVVK+RSLPWEDVEMDAI
Sbjct: 361 RKIHPRSSFNAFLEVVKRRSLPWEDVEMDAI 391
>gi|39753809|gb|AAR30452.1| PHYC [Atuna racemosa]
Length = 391
Score = 738 bits (1904), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/391 (87%), Positives = 364/391 (93%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLV EVSDLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVKEVSDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VY+FHEDEHGEVVAEC RPDLEPYLG HYPATDIPQASRFL MKNKVRMICDCLAPPVKV
Sbjct: 61 VYRFHEDEHGEVVAECCRPDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCLAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKL 357
IQDK+L QPLSLCGSTLRAPHGCH++YM NMG+IASLVMSVTIN+ E+E++ DQ + RKL
Sbjct: 121 IQDKRLAQPLSLCGSTLRAPHGCHSQYMANMGAIASLVMSVTINDDEEEMEADQRKARKL 180
Query: 358 WGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLL 417
WGLVVCHHTSPRFVPFPLRYACEFLIQVFG+Q+NKEVEL+AQ REKHILRTQTVLCDMLL
Sbjct: 181 WGLVVCHHTSPRFVPFPLRYACEFLIQVFGIQINKEVELAAQTREKHILRTQTVLCDMLL 240
Query: 418 RDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGL 477
RD+PV I+TQ+PNVMDLVKCDGAALYYR K WLLG+TPTE QIKDI EWLL YH STGL
Sbjct: 241 RDAPVAIITQSPNVMDLVKCDGAALYYRKKFWLLGITPTEAQIKDIVEWLLHYHGESTGL 300
Query: 478 STDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGG 537
STDSL+EAGYPGA LG AVCG+AAVKITSKDFLFWFRSHTAKEIKWGGAKHD KD G
Sbjct: 301 STDSLMEAGYPGASVLGGAVCGMAAVKITSKDFLFWFRSHTAKEIKWGGAKHDPNDKDDG 360
Query: 538 RKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
RKMHPRSSFKAFLEVVK+RSLPWEDVEMDAI
Sbjct: 361 RKMHPRSSFKAFLEVVKRRSLPWEDVEMDAI 391
>gi|227337|prf||1702221A phytochrome
Length = 491
Score = 736 bits (1901), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/490 (70%), Positives = 407/490 (83%), Gaps = 1/490 (0%)
Query: 51 NISSSTSNVPSSTVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEMLDLAPHA 110
++ S +VP+ V+AYLQR+QR LIQ FGCM+AV+E NF V+ YSENA E LDL P A
Sbjct: 2 SVGQSAESVPAGAVTAYLQRMQREGLIQNFGCMVAVEEPNFCVIAYSENASEFLDLIPQA 61
Query: 111 VPNIEQQDALTLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHR 170
VP++ + D L +G D+RTLFT S +AAL+KAA +++LLNPI +HC+ SGKP YAI HR
Sbjct: 62 VPSMGEMDVLGIGTDIRTLFTPSSSAALEKAAATQDISLLNPITVHCRRSGKPLYAIAHR 121
Query: 171 IDVGLVIDLEPVNPDDVPVTAA-GALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSD 229
ID+G+VID E V DVPV+AA GAL+S+KLAA+AI+RLQ+LP G+I LLCD +V EV +
Sbjct: 122 IDIGIVIDFEAVKMIDVPVSAAAGALQSHKLAARAITRLQALPGGDIELLCDTIVEEVRE 181
Query: 230 LTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICD 289
LTGYDRVM +KFHEDEHGEVVAE RR DLEPY+G HYPATDIPQASRFL+MKN+VR+I D
Sbjct: 182 LTGYDRVMAFKFHEDEHGEVVAEIRRMDLEPYMGLHYPATDIPQASRFLLMKNRVRLIAD 241
Query: 290 CLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN 349
C A PVK+IQD + QP+SL GSTLRAPHGCHA+YM NMGSIASLVM+V IN+ E+
Sbjct: 242 CYASPVKLIQDPDIRQPVSLAGSTLRAPHGCHAQYMGNMGSIASLVMAVIINDNEEYSRG 301
Query: 350 DQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQ 409
++GRKLWGLVVC HTSPR VPFPLR CEFL+QVFG+Q+N VEL+AQLREKHILRTQ
Sbjct: 302 AIQRGRKLWGLVVCQHTSPRTVPFPLRSVCEFLMQVFGMQLNLHVELAAQLREKHILRTQ 361
Query: 410 TVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLE 469
T+LCDMLLRD+P+GIV+QTPN+MDLVKCDGAALYY ++WLLG TPTE QIK+IA+WLLE
Sbjct: 362 TLLCDMLLRDAPIGIVSQTPNIMDLVKCDGAALYYGKRVWLLGTTPTENQIKEIADWLLE 421
Query: 470 YHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKH 529
+H STGLSTDSL +A YPGA LGDAVCG+AA KIT+KDFLFWFRSHTA E+KWGGAKH
Sbjct: 422 HHNDSTGLSTDSLADANYPGAHLLGDAVCGMAAAKITAKDFLFWFRSHTATEVKWGGAKH 481
Query: 530 DSGGKDGGRK 539
D KD GRK
Sbjct: 482 DPDEKDDGRK 491
>gi|39753813|gb|AAR30454.1| PHYC [Balanops vieillardii]
Length = 391
Score = 734 bits (1896), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/391 (86%), Positives = 366/391 (93%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLA KAISRLQSLPSGNIS+LCDVLV EVSDLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLATKAISRLQSLPSGNISVLCDVLVKEVSDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VY+FHEDEHGEVVAECRRPDLEPYLG HYPATDIPQASRFL MKNK+RMICDCLAPPVKV
Sbjct: 61 VYRFHEDEHGEVVAECRRPDLEPYLGLHYPATDIPQASRFLFMKNKIRMICDCLAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKL 357
IQDK+L QPLSLCGST+RAPH CH +YM NMGSIASLVMSVTINE +DE ++DQ+ GRKL
Sbjct: 121 IQDKRLAQPLSLCGSTMRAPHRCHVQYMANMGSIASLVMSVTINEDDDETESDQQNGRKL 180
Query: 358 WGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLL 417
WGLVVCHH+SPRFVPFPLRYACEFLIQVF +Q+NKEVEL+AQ+REKHIL+TQTVLCDMLL
Sbjct: 181 WGLVVCHHSSPRFVPFPLRYACEFLIQVFSIQINKEVELAAQMREKHILQTQTVLCDMLL 240
Query: 418 RDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGL 477
RD+P I+TQ+PNVMDLVKCDGAALYYR K+WL+GVTPTE QI+DIAEWLLEYHR STGL
Sbjct: 241 RDAPEAIITQSPNVMDLVKCDGAALYYRKKVWLIGVTPTEAQIRDIAEWLLEYHRESTGL 300
Query: 478 STDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGG 537
STD+LVEAGYPGA LG AVCG+AAV+ITSKDFLFWFRSHTAKEIKWGGAKHD KD G
Sbjct: 301 STDNLVEAGYPGASVLGVAVCGMAAVRITSKDFLFWFRSHTAKEIKWGGAKHDPDDKDDG 360
Query: 538 RKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
RKMHPRSSFKAFLE+VK+RSLPWEDVEMDAI
Sbjct: 361 RKMHPRSSFKAFLEMVKRRSLPWEDVEMDAI 391
>gi|21069983|gb|AAM34150.1| phytochrome C [Acmanthera latifolia]
Length = 392
Score = 734 bits (1895), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/392 (87%), Positives = 365/392 (93%), Gaps = 1/392 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAA+AISRLQSLPSGNISLLCDVLV EV DLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAARAISRLQSLPSGNISLLCDVLVKEVRDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVV+ECRRPDLE YLG HYPATDIPQASRFL MKNKVRMICDCLAPPVKV
Sbjct: 61 VYKFHEDEHGEVVSECRRPDLEAYLGLHYPATDIPQASRFLFMKNKVRMICDCLAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ-GRK 356
QDK+L QPL LCGSTLR+PHGCHA+YM NMG+IASLVMSVTINE +D +D DQ+Q RK
Sbjct: 121 FQDKRLAQPLGLCGSTLRSPHGCHAQYMANMGAIASLVMSVTINEGDDMIDGDQQQMARK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQ+NKEVEL+AQ+REKHILRTQT+LCDML
Sbjct: 181 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQINKEVELAAQVREKHILRTQTLLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PV IVTQ+PNVMDLVKCDGAALYYR K WLLGVTPTE QIK+IAEWL+EYH G+TG
Sbjct: 241 LRDAPVAIVTQSPNVMDLVKCDGAALYYRKKFWLLGVTPTEVQIKEIAEWLIEYHSGNTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGYPGA LGDAVCG+AAVKITSKDFLFWFRSHTAKEIKWGGAKHD KD
Sbjct: 301 LSTDSLMEAGYPGASVLGDAVCGMAAVKITSKDFLFWFRSHTAKEIKWGGAKHDPDDKDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
GRKMHPRSSFKAFLEVVK RSLPWED+EMDAI
Sbjct: 361 GRKMHPRSSFKAFLEVVKWRSLPWEDMEMDAI 392
>gi|21069981|gb|AAM34149.1| phytochrome C [Coleostachys genipifolia]
Length = 392
Score = 734 bits (1895), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/392 (87%), Positives = 365/392 (93%), Gaps = 1/392 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAA+AISRLQSLPSGNISLLCDVLV EV DLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAARAISRLQSLPSGNISLLCDVLVKEVRDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVV+ECRRPDLE YLG HYPATDIPQASRFL MKNKVRMICDCLAPPVKV
Sbjct: 61 VYKFHEDEHGEVVSECRRPDLEAYLGLHYPATDIPQASRFLFMKNKVRMICDCLAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ-GRK 356
IQDK+L QPLSLCGSTLR+PHGCHA+YM NMG+IASLVMSVTINE +D +D DQ+Q RK
Sbjct: 121 IQDKRLVQPLSLCGSTLRSPHGCHAQYMANMGAIASLVMSVTINEGDDTMDGDQQQMARK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQ+NKEVEL+AQ+REKHILRTQT+LCDML
Sbjct: 181 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQINKEVELAAQVREKHILRTQTLLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PV I+TQ+PNVMDLVKCDGAALYYR K WLLGVTPTE QIK+IA+WL+EYH G TG
Sbjct: 241 LRDAPVAIITQSPNVMDLVKCDGAALYYRKKFWLLGVTPTEAQIKEIAQWLIEYHSGDTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGYP A LGDAVCG+AAVKITS+DFLFWFRSHTAKEIKWGGAKHD KD
Sbjct: 301 LSTDSLMEAGYPSASVLGDAVCGMAAVKITSRDFLFWFRSHTAKEIKWGGAKHDPDDKDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
GRKMHPRSSFKAFLEVVK RSLPWEDVEMDAI
Sbjct: 361 GRKMHPRSSFKAFLEVVKWRSLPWEDVEMDAI 392
>gi|89330110|emb|CAJ80967.1| phytochrome A [Phtheirospermum japonicum]
Length = 610
Score = 733 bits (1891), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/524 (67%), Positives = 422/524 (80%), Gaps = 8/524 (1%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ GL+ID EPV P +VP+TAAGAL+SYKLAAKAI+RLQ+LPSG++ L
Sbjct: 1 SGKPFYAIIHRVTGGLIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALPSGSMERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
CD +V EV +LT YDRVM+YKFH+D+HGEV++E +P L+PY+G HYPATDIPQA+RFL
Sbjct: 61 CDTMVQEVFELTSYDRVMIYKFHDDDHGEVLSEITKPGLDPYVGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDC A VKVIQD L L+LCGSTLRAPH CH +YMENM SIASLVMSV
Sbjct: 121 MKNKVRMICDCRANHVKVIQDDNLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 340 INEA-EDELDNDQ---EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVE 395
+NE ED D+ ++ ++LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKE+E
Sbjct: 181 VNEGNEDGPDSSSSHPDKKKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEIE 240
Query: 396 LSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTP 455
L Q+ EK+ILRTQT+LCDMLLRD+P+GIV+Q+PNVMDLVKCDGA L Y+ K + LG+TP
Sbjct: 241 LENQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAVLIYKTKKYRLGMTP 300
Query: 456 TEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFR 515
++ QI+DI WL EYHR STGLSTDSL +AG+PGALALGDAVCG+AAV+IT KD+LFWFR
Sbjct: 301 SDFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITDKDWLFWFR 360
Query: 516 SHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLIL 575
SHTA EI+WGGAKH+ G KD GRKMHPRSSFKAFLEVVK RSLPW+D+EMDAIHSLQLIL
Sbjct: 361 SHTAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDIEMDAIHSLQLIL 420
Query: 576 RGSLQDEVAE---DSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGN 632
R + E E D K I + D +++ + EL +T+EMVRLIETA+VPI AVD G
Sbjct: 421 RNASNKEAEERDMDGKEI-HARLNDLQLDGMQELEAVTSEMVRLIETASVPIFAVDVDGL 479
Query: 633 VNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
VNGWN+K A+LTGL V++AIG + LV S + V ML A
Sbjct: 480 VNGWNTKIADLTGLPVEKAIGRHFLALVEDSSAEKVNKMLELAL 523
>gi|89331033|emb|CAJ80883.1| phytochrome A [Aureolaria pedicularia]
Length = 524
Score = 730 bits (1884), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/523 (67%), Positives = 420/523 (80%), Gaps = 7/523 (1%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ ++ID EPV P +VP+TAAGAL+SYKLAAKAI+RLQ+LPSG++ L
Sbjct: 1 SGKPFYAIIHRVTGSMIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALPSGSMERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
CD +V EV +LTGYDRVM+YKFH+D+HGEV++E +P LEPY+G HYPATDIPQA+RFL
Sbjct: 61 CDTMVQEVFELTGYDRVMIYKFHDDDHGEVLSEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
+KNKVRMICDC A VKVIQD KL L+LCGSTLRAPH CH +YMENM SIASLVMSV
Sbjct: 121 IKNKVRMICDCRANHVKVIQDDKLPIDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 340 INEA-EDELDNDQ--EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVEL 396
+NE ED D+ ++ ++LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKE+EL
Sbjct: 181 VNEGNEDGPDSSSHPDKQKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEIEL 240
Query: 397 SAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPT 456
Q+ EK+ILRTQT+LCDMLLRD+P+GIV+Q+PNVMDLVKCDGA L Y+ K + LG+TP+
Sbjct: 241 ENQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAVLIYKTKKYRLGMTPS 300
Query: 457 EEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRS 516
+ QI+DI WL EYHR STGLSTDSL +AG+PGALALGDAVCG+AAV+IT D+LFWFRS
Sbjct: 301 DFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITDTDWLFWFRS 360
Query: 517 HTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILR 576
HTA EI+WGGAKH+ G KD GRKMHPR SFKAFLEVVK RSLPW+D EMDAIHSLQLILR
Sbjct: 361 HTAAEIRWGGAKHEPGEKDDGRKMHPRLSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILR 420
Query: 577 GSLQDEVAE---DSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNV 633
+ E E D K I + D +++ I EL +T+EMVRLIETA+VPI AVD G V
Sbjct: 421 NASNKEAEERDVDGKEI-HARLNDLQLDGIQELEAVTSEMVRLIETASVPIFAVDVDGLV 479
Query: 634 NGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
NGWN+K A+LTGL VD+AIG + LV S + V ML A
Sbjct: 480 NGWNTKIADLTGLPVDKAIGRHFLALVEDSSAEAVNKMLELAL 522
>gi|39753835|gb|AAR30465.1| PHYC [Dovyalis rhamnoides]
Length = 391
Score = 729 bits (1881), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/391 (85%), Positives = 366/391 (93%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLV EVS LTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVKEVSALTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFHED+HGEVVAEC RPDLEPYLG HYPATDIPQASRFL MKNKVRMICDCLAPPVKV
Sbjct: 61 AYKFHEDQHGEVVAECCRPDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCLAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKL 357
++ K+L QPL+LCGSTLR+PHGCH +YMENMGSIASLVMSVTINE +DE+D+DQ++GRKL
Sbjct: 121 VEHKRLAQPLNLCGSTLRSPHGCHVQYMENMGSIASLVMSVTINEDDDEMDSDQQKGRKL 180
Query: 358 WGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLL 417
WGLVVCHHTSPRFVPFPLRYACEFL+QVFGVQ+NKEVEL+AQ+REKHIL TQTVLCDMLL
Sbjct: 181 WGLVVCHHTSPRFVPFPLRYACEFLLQVFGVQINKEVELAAQMREKHILETQTVLCDMLL 240
Query: 418 RDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGL 477
RD+P I+TQ+PNVMDLVKC GAALY+R K WLLGVTPTE QI+D++EWLL+YH STGL
Sbjct: 241 RDAPAAIITQSPNVMDLVKCGGAALYFRKKFWLLGVTPTEAQIRDLSEWLLQYHSESTGL 300
Query: 478 STDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGG 537
STDSL+EAGYPGA ALGDAVCG+AA+KI+SKDFLFWFRS+TAKEIKWGGAKHD KD G
Sbjct: 301 STDSLLEAGYPGASALGDAVCGMAAIKISSKDFLFWFRSYTAKEIKWGGAKHDPDDKDDG 360
Query: 538 RKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
RKMHPRSSFKAFLEVVK+RSLPWEDVEMDAI
Sbjct: 361 RKMHPRSSFKAFLEVVKRRSLPWEDVEMDAI 391
>gi|39753863|gb|AAR30479.1| PHYC [Leonia glycycarpa]
Length = 391
Score = 728 bits (1880), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/391 (86%), Positives = 366/391 (93%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLV EVS+LTGYDRVM
Sbjct: 1 DLEPVNPIDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVKEVSELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VY+FHEDEHGEV+AE +P LEPYLG HYPATDIPQASRFL MKNK+RMICDCLAPPVKV
Sbjct: 61 VYRFHEDEHGEVIAESCKPGLEPYLGLHYPATDIPQASRFLFMKNKIRMICDCLAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKL 357
+QDK+LDQPLSLCGS LR+PHGCH++YM NMGSIASLVMSVTINE +DE+D+DQ++GRKL
Sbjct: 121 VQDKRLDQPLSLCGSALRSPHGCHSQYMTNMGSIASLVMSVTINEDDDEMDSDQQKGRKL 180
Query: 358 WGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLL 417
WGLVVCHHTS RFVPFPLRYACEFLIQVFGVQ+NKEV+L+AQ++EKHIL+TQTVLCDMLL
Sbjct: 181 WGLVVCHHTSLRFVPFPLRYACEFLIQVFGVQINKEVKLAAQMKEKHILQTQTVLCDMLL 240
Query: 418 RDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGL 477
RD+PV I+TQ+PNVMDLVKCDGAALYY K WLLGVTPTE QI+DIAEWLLEYH GSTGL
Sbjct: 241 RDAPVAIITQSPNVMDLVKCDGAALYYGKKFWLLGVTPTEAQIRDIAEWLLEYHSGSTGL 300
Query: 478 STDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGG 537
STDSL+EAGYP A LGD VCG+AAV+ITSKDFLFWFRSHTAKE+KWGGAKHD KD G
Sbjct: 301 STDSLMEAGYPNASILGDPVCGMAAVRITSKDFLFWFRSHTAKEVKWGGAKHDPDDKDDG 360
Query: 538 RKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
RKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI
Sbjct: 361 RKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 391
>gi|21070021|gb|AAM34169.1| phytochrome C [Tristellateia madagascariensis]
Length = 392
Score = 728 bits (1880), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/392 (86%), Positives = 365/392 (93%), Gaps = 1/392 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLV EV DLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVKEVRDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVV+ECRR DLE YLG HYPATDIPQASRFL MKNKVRMICDCLAPPVKV
Sbjct: 61 VYKFHEDEHGEVVSECRRSDLESYLGLHYPATDIPQASRFLFMKNKVRMICDCLAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ-GRK 356
IQD++L QPLSLCGSTLR+PHGCHA+YM NMG+IASLVMSVTINE +D +D DQ+Q RK
Sbjct: 121 IQDERLPQPLSLCGSTLRSPHGCHAQYMANMGTIASLVMSVTINEDDDTMDGDQQQMARK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQ+NKE+EL+AQ+REKHILR QT+LCDML
Sbjct: 181 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQINKELELAAQVREKHILRIQTMLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PVGI+TQ+PNVMDLVKCDGAAL+Y+ K WLLG+TPTE QI+DIAEWLLEYH G+TG
Sbjct: 241 LRDAPVGIITQSPNVMDLVKCDGAALFYKNKFWLLGITPTEAQIRDIAEWLLEYHSGNTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGYPGA LGDAVCG+A+V ITS+DFLFWFRSHTAKEIKWGGAKHD KD
Sbjct: 301 LSTDSLMEAGYPGASVLGDAVCGMASVSITSRDFLFWFRSHTAKEIKWGGAKHDPDDKDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
GRKMHPRSSFKAFLEVVK RSLPWEDVEMDAI
Sbjct: 361 GRKMHPRSSFKAFLEVVKWRSLPWEDVEMDAI 392
>gi|39753811|gb|AAR30453.1| PHYC [Austrobuxus megacarpus]
Length = 391
Score = 728 bits (1879), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/391 (86%), Positives = 365/391 (93%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLV EVSDLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVKEVSDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VY+FHEDEHGEVVAEC RPDLEPYLG HYPATDIPQASRFL MKNKVRMICDC+A PV+V
Sbjct: 61 VYRFHEDEHGEVVAECCRPDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCMALPVEV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKL 357
+QD++L QPLSLCGSTLR+PHGCHA+YM NMGS+ASLVMSVTINE +DE+D+ Q+ GRKL
Sbjct: 121 VQDERLSQPLSLCGSTLRSPHGCHAQYMANMGSVASLVMSVTINEDDDEMDSGQQTGRKL 180
Query: 358 WGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLL 417
WGLVVCHHT RFVPFPLRYACEFLIQVFGVQ++KEVEL+AQ+REKHILRTQTVLCDMLL
Sbjct: 181 WGLVVCHHTCSRFVPFPLRYACEFLIQVFGVQISKEVELAAQMREKHILRTQTVLCDMLL 240
Query: 418 RDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGL 477
RD+PV I++Q+PNVMDLVKCDGAALYYR K W LGVTPTE +I+DIAEWLLE H GSTGL
Sbjct: 241 RDAPVAIISQSPNVMDLVKCDGAALYYRKKFWSLGVTPTEAEIRDIAEWLLECHNGSTGL 300
Query: 478 STDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGG 537
STDSL+EAGYPGA LGDAVCG+AAV+ITSKDFLFWFRSHTAKEIKWGGAKHD KD G
Sbjct: 301 STDSLMEAGYPGASILGDAVCGMAAVRITSKDFLFWFRSHTAKEIKWGGAKHDPDDKDDG 360
Query: 538 RKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
RKMHPRSSFKAFLEVVK+RSLPWEDVEMDAI
Sbjct: 361 RKMHPRSSFKAFLEVVKRRSLPWEDVEMDAI 391
>gi|40647509|gb|AAR88468.1| phytochrome C [Jubelina wilburii]
Length = 392
Score = 728 bits (1878), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/392 (86%), Positives = 365/392 (93%), Gaps = 1/392 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLV EV DLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVKEVRDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVV+ECRR DLEPYLG HYPATDIPQASRFL MKNKVRMICDCLAPPVKV
Sbjct: 61 VYKFHEDEHGEVVSECRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCLAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ-GRK 356
IQD++L QPLSLCGSTLR+PHGCHA+YM NMG+IASLVMSVTINE +D +D DQ+Q RK
Sbjct: 121 IQDERLPQPLSLCGSTLRSPHGCHAQYMTNMGTIASLVMSVTINEDDDTMDGDQQQMTRK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQ+NKEVEL+AQ+REKHIL+ QT+LCDML
Sbjct: 181 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQINKEVELAAQVREKHILQIQTMLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PV I+TQ+PNVMDLVKCDGAALY++ K WLLGVTPT EQI+DIAEWLLEYH G+TG
Sbjct: 241 LRDAPVAIITQSPNVMDLVKCDGAALYFKNKTWLLGVTPTVEQIRDIAEWLLEYHSGNTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGYPGA LGDAVCG+AAV ITS+DFLFWFRSHTAKEIKWGGAKHD KD
Sbjct: 301 LSTDSLMEAGYPGASVLGDAVCGVAAVSITSRDFLFWFRSHTAKEIKWGGAKHDPDDKDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
GRKMHPRSSFKAFLEVVK RS+PWED+EMDAI
Sbjct: 361 GRKMHPRSSFKAFLEVVKWRSMPWEDIEMDAI 392
>gi|357450589|ref|XP_003595571.1| Phytochrome E [Medicago truncatula]
gi|87241383|gb|ABD33241.1| Bacteriophytochrome [Medicago truncatula]
gi|355484619|gb|AES65822.1| Phytochrome E [Medicago truncatula]
Length = 1122
Score = 728 bits (1878), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/677 (53%), Positives = 470/677 (69%), Gaps = 30/677 (4%)
Query: 12 SRSSSARSKQNA-----RVAAQTSIDAKLAEDFDES-----DFDYSTSVNISSSTSNVPS 61
S SSSA SK N + AQ +DA+L +F++S F+YS + I V
Sbjct: 13 SLSSSAESKMNTNKETEKTLAQYGVDAELLAEFEQSRVYGKSFEYSKT--ILDPPRLVSE 70
Query: 62 STVSAYLQRVQRGRLIQPFGCMIAVDEQNFTVLGYSENAPEML-DLAPHAVPNIEQQDAL 120
+ YL R+QRG IQPFGC++ ++E F ++GYSEN ++L D+ +
Sbjct: 71 EKMITYLSRIQRGGFIQPFGCLVVIEESTFRIIGYSENCFQLLGDIGSEHFMGL------ 124
Query: 121 TLGIDVRTLFTSSGAAALQKAANFGEVNLLNPILIHCKTSGKPFYAILHRIDVGLVIDLE 180
+G+D TLFT ++L KA E++ LNPI + +T+ KPFYAILHRIDVG++IDLE
Sbjct: 125 -IGVDATTLFTPPSGSSLVKAVASREISRLNPIWVRARTTEKPFYAILHRIDVGVLIDLE 183
Query: 181 PVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYK 240
P ++ +G+ +S K+A AISRLQS +ISLLCD +V EV LTGY+RVM+YK
Sbjct: 184 PARSSGPALSLSGSFQSQKMAVSAISRLQSCRREDISLLCDTVVEEVQKLTGYERVMIYK 243
Query: 241 FHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQD 300
FHED+HGEVV+E RR DLE YLG HYP+ DIPQA+RFL +N+VR+I DC A PVKVIQ
Sbjct: 244 FHEDDHGEVVSETRRSDLESYLGLHYPSIDIPQAARFLFKQNRVRLIYDCHAKPVKVIQS 303
Query: 301 KKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGL 360
++L +PL L STLR+PH CH +YM NMGSIASLVM+V INE + +LWGL
Sbjct: 304 RELKKPLCLVNSTLRSPHDCHKQYMANMGSIASLVMAVVINEKDTT---------RLWGL 354
Query: 361 VVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDS 420
+VCHHTSP V FP+R+ACEF++ FG+Q+ E++L++Q+ EK IL+TQT+LCDMLLRD+
Sbjct: 355 LVCHHTSPHHVSFPVRHACEFVMHTFGMQLYMEIQLASQMEEKRILKTQTMLCDMLLRDA 414
Query: 421 PVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTD 480
P GIVTQ+P++MDLVKCDGAALYY WLLG+TPT+ Q+KDIAEWLL + STGL+T+
Sbjct: 415 PFGIVTQSPSIMDLVKCDGAALYYDENCWLLGITPTKLQVKDIAEWLLSNYSDSTGLTTE 474
Query: 481 SLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKM 540
SLV+AGYPGA LGDAVCG+A+ +I + LFWFRSHTAKEI+WGGAKH KD G KM
Sbjct: 475 SLVDAGYPGATLLGDAVCGMASARINQRHILFWFRSHTAKEIQWGGAKHHPTDKDDGGKM 534
Query: 541 HPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRI 600
+PR+SFKAFLEV+K +SLPWE E++AIHSLQLI++ QD K + + D I
Sbjct: 535 NPRTSFKAFLEVLKSKSLPWEISEINAIHSLQLIMQDLFQDTDNTCPKTLKDFEKSDALI 594
Query: 601 EKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DL 659
E+ I EMVRLIETAAVPI VD+ G +NGWN K AELTGL +A+G +L ++
Sbjct: 595 GGSHEISSIALEMVRLIETAAVPIFGVDSDGLINGWNVKIAELTGLPTSEAMGKSLENEV 654
Query: 660 VAGDSVDVVKNMLSSAF 676
V DS + + N+L A
Sbjct: 655 VHVDSRETLTNILRRAL 671
>gi|39753851|gb|AAR30473.1| PHYC [Hirtella bicornis]
Length = 391
Score = 727 bits (1877), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/391 (85%), Positives = 364/391 (93%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLV EVSDLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVKEVSDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VY+FHEDEHGEV+AEC PDLEPYLG HYPATDIPQASRFL MKNKVRMICDCLAPPVKV
Sbjct: 61 VYRFHEDEHGEVIAECCMPDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCLAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKL 357
IQDK+L QPLSLCGSTLRAPHGCH++YM NMG+IASLVMSVTINE ++E++ Q++ RKL
Sbjct: 121 IQDKRLAQPLSLCGSTLRAPHGCHSQYMANMGAIASLVMSVTINEDDEEMETGQQKARKL 180
Query: 358 WGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLL 417
WGLVVCHH+SPRF+PFPLRYACEFLIQVFG+Q+NKEVEL+AQ REKHILRTQTVLCDMLL
Sbjct: 181 WGLVVCHHSSPRFIPFPLRYACEFLIQVFGIQINKEVELAAQTREKHILRTQTVLCDMLL 240
Query: 418 RDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGL 477
RD+PV I+TQ+PN+M+LVKCDGAALYYR K WLLG+TPT+ QIKDI EWLL+YH STGL
Sbjct: 241 RDAPVAIITQSPNIMNLVKCDGAALYYRKKFWLLGITPTDTQIKDIVEWLLQYHGESTGL 300
Query: 478 STDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGG 537
STDSL+EAGYPGA LGDAVCG+AAVKITSKDFLFWFRSHTAKEIKWGGAKHD KD G
Sbjct: 301 STDSLMEAGYPGASVLGDAVCGMAAVKITSKDFLFWFRSHTAKEIKWGGAKHDPDDKDDG 360
Query: 538 RKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
RKMHPRSSFKAFLEVVK+RSL WEDVEMDAI
Sbjct: 361 RKMHPRSSFKAFLEVVKRRSLHWEDVEMDAI 391
>gi|40647517|gb|AAR88472.1| phytochrome C [Tristellateia sp. Davis 19-01]
Length = 392
Score = 727 bits (1877), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/392 (86%), Positives = 364/392 (92%), Gaps = 1/392 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLV EV DLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVKEVRDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVV+ECRR DLE YLG HYPATDIPQASRFL MKNKVRMICDCLAPPVKV
Sbjct: 61 VYKFHEDEHGEVVSECRRSDLESYLGLHYPATDIPQASRFLFMKNKVRMICDCLAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ-GRK 356
IQD +L QPLSLCGSTLR+PHGCHA+YM NMG+IASLVMSVTINE +D +D DQ+Q RK
Sbjct: 121 IQDGRLPQPLSLCGSTLRSPHGCHAQYMANMGTIASLVMSVTINEDDDTMDGDQQQMARK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQ+NKE+EL+AQ+REKHILR QT+LCDML
Sbjct: 181 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQINKEIELAAQVREKHILRIQTMLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PVGI+TQ+PNVMDLVKCDGAAL+Y+ K WLLG+TPTE QI+DIAEWLLEYH G+TG
Sbjct: 241 LRDAPVGIITQSPNVMDLVKCDGAALFYKNKFWLLGITPTEAQIRDIAEWLLEYHSGNTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGYPGA LGDAVCG+A+V ITS+DFLFWFRSHTAKEIKWGGAKHD KD
Sbjct: 301 LSTDSLMEAGYPGASVLGDAVCGMASVSITSRDFLFWFRSHTAKEIKWGGAKHDPDDKDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
GRKMHPRSSFKAFLEVVK RSLPWED+EMDAI
Sbjct: 361 GRKMHPRSSFKAFLEVVKWRSLPWEDMEMDAI 392
>gi|21069967|gb|AAM34142.1| phytochrome C [Tristellateia madagascariensis]
Length = 392
Score = 727 bits (1876), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/392 (85%), Positives = 365/392 (93%), Gaps = 1/392 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVP+TAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLV EV DLTGYDRVM
Sbjct: 1 DLEPVNPADVPLTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVKEVRDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVV+ECRR DLE YLG HYPATDIPQASRFL MKNKVRMICDCLAPPVKV
Sbjct: 61 VYKFHEDEHGEVVSECRRSDLESYLGLHYPATDIPQASRFLFMKNKVRMICDCLAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ-GRK 356
IQD++L QPLSLCGSTLR+PHGCHA+YM NMG+IASLVMSVTINE +D +D DQ+Q RK
Sbjct: 121 IQDERLPQPLSLCGSTLRSPHGCHAQYMANMGTIASLVMSVTINEDDDTMDGDQQQMARK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGL+VCHHTSPRFVPFPLRYACEFLIQVFGVQ+NKE+EL+AQ+REKHILR QT+LCDML
Sbjct: 181 LWGLIVCHHTSPRFVPFPLRYACEFLIQVFGVQINKELELAAQVREKHILRIQTMLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PVGI+TQ+PNVMDLVKCDGAAL+Y+ K WLLG+TPTE QI+DIAEWLLEYH G+TG
Sbjct: 241 LRDAPVGIITQSPNVMDLVKCDGAALFYKNKFWLLGITPTEAQIRDIAEWLLEYHSGNTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGYPGA LGDAVCG+A+V ITS+DFLFWFRSHTAKEIKWGGAKHD KD
Sbjct: 301 LSTDSLMEAGYPGASVLGDAVCGMASVSITSRDFLFWFRSHTAKEIKWGGAKHDPDDKDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
GRKMHPRSSFKAFLEVVK RSLPWEDVEMDAI
Sbjct: 361 GRKMHPRSSFKAFLEVVKWRSLPWEDVEMDAI 392
>gi|39753829|gb|AAR30462.1| PHYC [Dichapetalum macrocarpum]
Length = 391
Score = 726 bits (1873), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/391 (86%), Positives = 361/391 (92%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAIS+LQSLPSGNISLLCDVLV EV DLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKAISKLQSLPSGNISLLCDVLVKEVRDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFH+DEHGEVV+EC RP LEPYLG HYPATDIP+ASRFL MKNKVRMICDCLA PVKV
Sbjct: 61 VYKFHDDEHGEVVSECHRPHLEPYLGLHYPATDIPRASRFLFMKNKVRMICDCLAAPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKL 357
IQD +L QPLSLCGSTLRAPHGCHA+YMENMGSIASLVMSV INE +DE N Q++GRKL
Sbjct: 121 IQDNRLTQPLSLCGSTLRAPHGCHAQYMENMGSIASLVMSVMINEDDDEDRNCQQKGRKL 180
Query: 358 WGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLL 417
WGLVVCHHTSPRFVPFPLRYACEFLIQVFG+Q+NKEVELSAQ+REKH+LR QTVLCDMLL
Sbjct: 181 WGLVVCHHTSPRFVPFPLRYACEFLIQVFGIQINKEVELSAQMREKHVLRIQTVLCDMLL 240
Query: 418 RDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGL 477
RD+PV I+TQ+PNVMDLV+CDGAALYYR K WLLG+TPTE QI DIAEWLLEYHR STGL
Sbjct: 241 RDAPVAIITQSPNVMDLVRCDGAALYYRKKFWLLGITPTEGQISDIAEWLLEYHRESTGL 300
Query: 478 STDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGG 537
STDSL+EAGYPGA LGDAVCG+AAV+I SKDFLFWFRSHTAKEIKWGGAKHD KD G
Sbjct: 301 STDSLMEAGYPGASDLGDAVCGMAAVRIASKDFLFWFRSHTAKEIKWGGAKHDPDVKDDG 360
Query: 538 RKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
RKMHPRSSFKAFLEVVK RSLPWED+EMDAI
Sbjct: 361 RKMHPRSSFKAFLEVVKWRSLPWEDIEMDAI 391
>gi|51320429|gb|AAU00365.1| phytochrome [Ixonanthes chinensis]
Length = 391
Score = 726 bits (1873), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/391 (86%), Positives = 361/391 (92%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPS N+SLLCDVLV EVSDLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSRNLSLLCDVLVKEVSDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHED HGEVVAEC RPDLEPYLG HYPATDIPQASRFL MKNKVRMICDC VKV
Sbjct: 61 VYKFHEDGHGEVVAECCRPDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCRTSSVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKL 357
+QD+KL QP+SLCGSTLRAPHGCHA+YM NMGSIASLVMSVTINE +DE+++D ++ RKL
Sbjct: 121 VQDQKLTQPISLCGSTLRAPHGCHAQYMANMGSIASLVMSVTINEEDDEIESDHQKARKL 180
Query: 358 WGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLL 417
WGLVVCHHT PRF+PFPLRYACEFL+QVFGVQVNKEVEL+ Q+REKH LRTQTVLCDMLL
Sbjct: 181 WGLVVCHHTCPRFLPFPLRYACEFLMQVFGVQVNKEVELAVQMREKHTLRTQTVLCDMLL 240
Query: 418 RDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGL 477
RD+PV IVTQ+PNVMDLV+CDGAALYYR K WLLGVTPTE QI+DI EWLLEYH GSTGL
Sbjct: 241 RDAPVAIVTQSPNVMDLVRCDGAALYYRKKFWLLGVTPTEPQIRDIVEWLLEYHSGSTGL 300
Query: 478 STDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGG 537
STDSL+EAGYPGA LGDAVCG+AA++ITSKDFLFWFRSHTAKEIKWGGAKHD G KD G
Sbjct: 301 STDSLMEAGYPGASILGDAVCGMAAIRITSKDFLFWFRSHTAKEIKWGGAKHDPGDKDDG 360
Query: 538 RKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
RKMHPRSSFKAFLEVVK+RSLPWEDVEMDAI
Sbjct: 361 RKMHPRSSFKAFLEVVKRRSLPWEDVEMDAI 391
>gi|21070055|gb|AAM34186.1| phytochrome C [Hiraea fagifolia]
Length = 392
Score = 725 bits (1872), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/392 (86%), Positives = 365/392 (93%), Gaps = 1/392 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPV+P DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLV EV DLTGYDRVM
Sbjct: 1 DLEPVDPADVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVKEVRDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVV+ECRRPDLE YLG HYPATDIPQASRFL MKNKVRMICDCLAPPVKV
Sbjct: 61 VYKFHEDEHGEVVSECRRPDLESYLGLHYPATDIPQASRFLFMKNKVRMICDCLAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-K 356
IQDK+L QPLSLCGSTLR+PHGCHA+YM NM +IASLVMSVTINE +D +D DQ+Q K
Sbjct: 121 IQDKRLPQPLSLCGSTLRSPHGCHAQYMTNMRTIASLVMSVTINEDDDTMDGDQQQMTGK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQ+NKEVEL+AQ+REKHIL+ QT+LCDML
Sbjct: 181 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQINKEVELAAQVREKHILQIQTMLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PV I+TQ+PNVMDLVKCDGAALY++ K+WLLGVTP EEQI+DIAEWLLEYH G+TG
Sbjct: 241 LRDAPVAIITQSPNVMDLVKCDGAALYFKNKIWLLGVTPKEEQIRDIAEWLLEYHSGNTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGYPGA LGDAVCG+AAV ITS+DFLFWFRSHTAKEIKWGGAKHD G KD
Sbjct: 301 LSTDSLMEAGYPGASVLGDAVCGMAAVSITSRDFLFWFRSHTAKEIKWGGAKHDPGDKDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
GRKMHPRSSFKAFLEVVK RS+PWEDVEMDAI
Sbjct: 361 GRKMHPRSSFKAFLEVVKWRSMPWEDVEMDAI 392
>gi|21069965|gb|AAM34141.1| phytochrome C [Tristellateia madagascariensis]
Length = 392
Score = 725 bits (1872), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/392 (85%), Positives = 365/392 (93%), Gaps = 1/392 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLV EV DLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVKEVRDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVV+ECRR DLE YLG HYPATDIPQASRFL MKNKVRMICDCLAPPVKV
Sbjct: 61 VYKFHEDEHGEVVSECRRSDLESYLGLHYPATDIPQASRFLFMKNKVRMICDCLAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ-GRK 356
IQD++L QPLSLCGSTLR+PHGCHA+YM NMG+IASLVMSVTINE +D +D DQ+Q RK
Sbjct: 121 IQDERLPQPLSLCGSTLRSPHGCHAQYMANMGTIASLVMSVTINEDDDTMDGDQQQMARK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQ+NKE+EL+AQ+REKHILR QT+LCDML
Sbjct: 181 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQINKELELAAQVREKHILRIQTMLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PVGI+TQ+PNVMDLVKCDGAAL+Y+ K WLLG+TPTE QI+DIAEWLLEYH G+TG
Sbjct: 241 LRDAPVGIITQSPNVMDLVKCDGAALFYKNKFWLLGITPTEAQIRDIAEWLLEYHSGNTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGYPGA LGDAVCG+A+V ITS+DFLFWFRSHTAKEIKWGGAKHD KD
Sbjct: 301 LSTDSLMEAGYPGASVLGDAVCGMASVSITSRDFLFWFRSHTAKEIKWGGAKHDPDDKDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
GRKMHPRSSFKAFLEVVK RSLPW+D+EMDAI
Sbjct: 361 GRKMHPRSSFKAFLEVVKWRSLPWKDMEMDAI 392
>gi|40647519|gb|AAR88473.1| phytochrome C [Tristellateia sp. Davis 29-01]
Length = 392
Score = 725 bits (1872), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/391 (85%), Positives = 364/391 (93%), Gaps = 1/391 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLV EV DLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVKEVRDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVV+ECRR DLE YLG HYPATDIPQASRFL MKNKVRMICDCL+PPVKV
Sbjct: 61 VYKFHEDEHGEVVSECRRSDLESYLGLHYPATDIPQASRFLFMKNKVRMICDCLSPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ-GRK 356
IQD++L QPLSLCGSTLR+PHGCHA+YM NMG+IASLVMSVTINE +D +D DQ+Q RK
Sbjct: 121 IQDERLPQPLSLCGSTLRSPHGCHAQYMANMGTIASLVMSVTINEDDDTMDGDQQQMARK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTSPRF+PFPLRYACEFL+QVFGVQ+NKE+EL+AQ+REKHILR QT+LCDML
Sbjct: 181 LWGLVVCHHTSPRFIPFPLRYACEFLLQVFGVQINKEIELAAQVREKHILRIQTMLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PVGI+TQ+PNVMDLVKCDGAAL+Y+ K WLLG+TPTE QI+DIAEWLLEYH G+TG
Sbjct: 241 LRDAPVGIITQSPNVMDLVKCDGAALFYKNKFWLLGITPTEAQIRDIAEWLLEYHSGNTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGYPGA LGDAVCG+A+V ITS+DFLFWFRSHTAKEIKWGGAKHD KD
Sbjct: 301 LSTDSLMEAGYPGASVLGDAVCGMASVSITSRDFLFWFRSHTAKEIKWGGAKHDPDDKDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDA 567
GRKMHPRSSFKAFLEVVK RSLPWEDVEMDA
Sbjct: 361 GRKMHPRSSFKAFLEVVKWRSLPWEDVEMDA 391
>gi|21069985|gb|AAM34151.1| phytochrome C [Pterandra arborea]
Length = 392
Score = 725 bits (1872), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/392 (86%), Positives = 363/392 (92%), Gaps = 1/392 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAA+AISRLQSLPSG+ISLLCDVLV EV DLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAARAISRLQSLPSGDISLLCDVLVKEVRDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVV+ECRRPDLE Y G HYPATDIPQASRFL MKNKVRMICDCLAPPV+V
Sbjct: 61 VYKFHEDEHGEVVSECRRPDLEAYFGLHYPATDIPQASRFLFMKNKVRMICDCLAPPVQV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ-GRK 356
IQDK+L QPLSLCGSTLR+PHGCHA+YM NMG+IASLV+SVTINE +D +D DQ+Q RK
Sbjct: 121 IQDKRLAQPLSLCGSTLRSPHGCHAQYMANMGAIASLVISVTINEGDDMMDGDQQQMARK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQ+ KEVEL+AQ+REKHILRTQT+LCDML
Sbjct: 181 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQITKEVELAAQVREKHILRTQTLLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PV I+TQ+PNVMDLVKCDGAALYYR K WLLGVTPTE QIK+IAEWLLEYH G+ G
Sbjct: 241 LRDAPVAIITQSPNVMDLVKCDGAALYYRKKFWLLGVTPTEAQIKEIAEWLLEYHSGNMG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGYPGA LG+AVCG+AAVKITS+D LFWFRSHTAKEIKWGGAKHD KD
Sbjct: 301 LSTDSLMEAGYPGASVLGNAVCGMAAVKITSRDLLFWFRSHTAKEIKWGGAKHDPDDKDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
GRKMHPRSSFKAFLEVVK RSLPWEDVEMDAI
Sbjct: 361 GRKMHPRSSFKAFLEVVKWRSLPWEDVEMDAI 392
>gi|39753861|gb|AAR30478.1| PHYC [Lachnostylis bilocularis]
Length = 391
Score = 725 bits (1872), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/391 (86%), Positives = 365/391 (93%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVT AGALKSYKLAAKAISRLQSLPSGNISLLCDVLV E+SDLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTTAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVKEISDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VY+FH+DEHGEV+AECRRPDLEPYLG HYPA DIPQASRFL MKNKVRMICDCLAPPVKV
Sbjct: 61 VYRFHDDEHGEVIAECRRPDLEPYLGLHYPAIDIPQASRFLFMKNKVRMICDCLAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKL 357
IQDK+L Q LSL GSTLR+PHGCHA+YM NMGSIASLVMSVTINE +DE+D+D+E+G +L
Sbjct: 121 IQDKRLSQQLSLGGSTLRSPHGCHAQYMANMGSIASLVMSVTINEDDDEMDSDRERGIRL 180
Query: 358 WGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLL 417
WGLVVCHHTSPRFVP+PLRYACEFLIQVFGVQV+KEV+L+AQ+REKHIL+TQTVLCDMLL
Sbjct: 181 WGLVVCHHTSPRFVPYPLRYACEFLIQVFGVQVSKEVQLAAQMREKHILQTQTVLCDMLL 240
Query: 418 RDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGL 477
RD+PV I+TQ+PNVMDLVKCDGAALYYR K WLLGVTPTE QIKDIAEWLLE H GSTGL
Sbjct: 241 RDAPVAIITQSPNVMDLVKCDGAALYYRKKFWLLGVTPTEAQIKDIAEWLLECHGGSTGL 300
Query: 478 STDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGG 537
STDSL+EAGYPGA L DAVCG+AAV+ITSKDFLFWFRSHTAKEIKWGGAKHD KD G
Sbjct: 301 STDSLMEAGYPGAAVLDDAVCGMAAVRITSKDFLFWFRSHTAKEIKWGGAKHDPEDKDDG 360
Query: 538 RKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
RKMHP SSFKAFL+VVKQRSLPWED+EMDAI
Sbjct: 361 RKMHPVSSFKAFLDVVKQRSLPWEDIEMDAI 391
>gi|21069951|gb|AAM34134.1| phytochrome C [Hiraea fagifolia]
Length = 392
Score = 725 bits (1871), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/392 (86%), Positives = 363/392 (92%), Gaps = 1/392 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLA KAISRLQSLPSGNISLLCDVLV EV DLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAVKAISRLQSLPSGNISLLCDVLVKEVRDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVV+ECRRPDLE YLG HYPATDIPQASRFL MKNKVRMICDCLAPPVKV
Sbjct: 61 VYKFHEDEHGEVVSECRRPDLESYLGLHYPATDIPQASRFLFMKNKVRMICDCLAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ-GRK 356
IQDK+L QPLSLCGSTLR+PHGCHA+YM NM +IASLVMSV INE +D +D DQ+Q RK
Sbjct: 121 IQDKRLPQPLSLCGSTLRSPHGCHAQYMTNMRTIASLVMSVAINEDDDTMDGDQQQMTRK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHH SPRFVPFPLRYACEFLIQVFGVQ+NKEVEL+AQ+REKHIL+ QT+LCDML
Sbjct: 181 LWGLVVCHHASPRFVPFPLRYACEFLIQVFGVQINKEVELAAQVREKHILQIQTMLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PV I+TQ+PNVMDLVKCDGAALY++ K+WLLGVTP EEQI+DIAEWLLEYH G+TG
Sbjct: 241 LRDAPVAIITQSPNVMDLVKCDGAALYFKNKIWLLGVTPKEEQIRDIAEWLLEYHSGNTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGYPGA LGDAVCG+AAV ITS+DFLFWFRSHTAKEIKWGGAKHD G KD
Sbjct: 301 LSTDSLMEAGYPGASVLGDAVCGMAAVSITSRDFLFWFRSHTAKEIKWGGAKHDPGDKDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
GRKMHPRSSFKAFLEVVK RS+PWEDVEMDAI
Sbjct: 361 GRKMHPRSSFKAFLEVVKWRSMPWEDVEMDAI 392
>gi|6715243|gb|AAF26343.1|AF190097_1 phytochrome C, partial [Nelumbo nucifera]
Length = 391
Score = 725 bits (1871), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/391 (85%), Positives = 367/391 (93%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAK+ISRLQSLPSGNISLLCDVLV EVSDLTGYDR+M
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKSISRLQSLPSGNISLLCDVLVREVSDLTGYDRIM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHG VVAECRRPDLE YLG HYPATDIPQASRFL MKNKVRMICDCLAPPVKV
Sbjct: 61 VYKFHEDEHGGVVAECRRPDLESYLGLHYPATDIPQASRFLFMKNKVRMICDCLAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKL 357
I DKKL QPLSLC STLR PHGCHA+YM NMGSIASLVMSVTIN+ ++E+++DQ +GRKL
Sbjct: 121 IHDKKLAQPLSLCASTLRVPHGCHAQYMANMGSIASLVMSVTINDDDNEMESDQPKGRKL 180
Query: 358 WGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLL 417
WGLVVCHHTSPRFVPFPLRYACEFL+QVFG+Q++KEVEL+AQLREKHIL+TQT+LCDMLL
Sbjct: 181 WGLVVCHHTSPRFVPFPLRYACEFLVQVFGIQLDKEVELAAQLREKHILKTQTLLCDMLL 240
Query: 418 RDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGL 477
R++PVGI T++PNVMDLVKCDGA+LYY+ K WLLG+TPTE QI+DIA WLLE+H GSTGL
Sbjct: 241 RNAPVGIFTESPNVMDLVKCDGASLYYKNKFWLLGITPTEAQIRDIAGWLLEHHDGSTGL 300
Query: 478 STDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGG 537
STDSL+EAGYPGA LGDAVCG+AA+KITSKDFLFWFRSHTAK+IKWGGAKHD KDGG
Sbjct: 301 STDSLMEAGYPGASVLGDAVCGMAAIKITSKDFLFWFRSHTAKKIKWGGAKHDPVVKDGG 360
Query: 538 RKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
RK+HPRSSFKAFLEVVK+RSLPWEDVEMDAI
Sbjct: 361 RKVHPRSSFKAFLEVVKRRSLPWEDVEMDAI 391
>gi|21069949|gb|AAM34133.1| phytochrome C [Hiraea fagifolia]
Length = 392
Score = 725 bits (1871), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/392 (85%), Positives = 364/392 (92%), Gaps = 1/392 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTA GALKSYKLAAKAISRLQSLPSGNISLLCDVLV EV DLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAVGALKSYKLAAKAISRLQSLPSGNISLLCDVLVKEVRDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVV+ECRRPDLE YLG HYPATDIPQASRFL MKNKVRMICDCLAPPVKV
Sbjct: 61 VYKFHEDEHGEVVSECRRPDLESYLGLHYPATDIPQASRFLFMKNKVRMICDCLAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ-GRK 356
IQDK+L QPLSLCGSTLR+PHGCHA+YM NM +IASLVMSVTINE +D +D D++Q RK
Sbjct: 121 IQDKRLPQPLSLCGSTLRSPHGCHAQYMTNMRTIASLVMSVTINEDDDTMDGDRQQMTRK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHH SPRFVPFPLRYACEFLIQVFGVQ+NKEVEL+AQ+REKHIL+ QT+LCDML
Sbjct: 181 LWGLVVCHHASPRFVPFPLRYACEFLIQVFGVQINKEVELAAQVREKHILQIQTMLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PV I+TQ+PNVMDLVKCDGAALY++ K+WLLGVTP EEQI+DIAEWLLEYH G+TG
Sbjct: 241 LRDAPVAIITQSPNVMDLVKCDGAALYFKNKIWLLGVTPKEEQIRDIAEWLLEYHSGNTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGYPGA LGDAVCG+AAV ITS+DFLFWFRSHTAKEIKWGGAKHD G KD
Sbjct: 301 LSTDSLMEAGYPGASVLGDAVCGMAAVSITSRDFLFWFRSHTAKEIKWGGAKHDPGDKDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
GRKMHPRSSFKAFLEVVK RS+PWED+EMDAI
Sbjct: 361 GRKMHPRSSFKAFLEVVKWRSMPWEDIEMDAI 392
>gi|13383458|gb|AAK20992.1| phytochrome C [Tetracentron sinense]
Length = 390
Score = 724 bits (1870), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/391 (87%), Positives = 364/391 (93%), Gaps = 1/391 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGN+SLL DVLV EVSDLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNLSLLRDVLVQEVSDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVVAEC DLEPYLG HYPATDIPQASRFL MKNK+RMICDCLAPPVKV
Sbjct: 61 VYKFHEDEHGEVVAECLISDLEPYLGLHYPATDIPQASRFLFMKNKIRMICDCLAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKL 357
IQDK+L QPLSLCGSTLRAPHGCHA+YMENMGSIASLVMSVTIN+ +DE+++D+ +GRKL
Sbjct: 121 IQDKRLVQPLSLCGSTLRAPHGCHAQYMENMGSIASLVMSVTINDDDDEIESDK-RGRKL 179
Query: 358 WGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLL 417
WGLVVCHHTSPRFVPFPLRYACEFLIQVFG+Q+NKEVEL AQLREK LRTQTVLCDMLL
Sbjct: 180 WGLVVCHHTSPRFVPFPLRYACEFLIQVFGIQLNKEVELVAQLREKQTLRTQTVLCDMLL 239
Query: 418 RDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGL 477
RD+PVGIVTQ+PNVM+LVKCDGAALYYR WLLGVTPTE QI+DIAEWLLEYH GSTGL
Sbjct: 240 RDAPVGIVTQSPNVMELVKCDGAALYYRSTFWLLGVTPTEAQIRDIAEWLLEYHNGSTGL 299
Query: 478 STDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGG 537
STDS +EAGYPGA LGDAVCG++AVKITSKDFLFWFRSHTAKEIKWGGAKHD KD G
Sbjct: 300 STDSFMEAGYPGAAVLGDAVCGMSAVKITSKDFLFWFRSHTAKEIKWGGAKHDPFDKDDG 359
Query: 538 RKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
+KMHPRSSFKAFLEVVK RSLPWED+EMDAI
Sbjct: 360 KKMHPRSSFKAFLEVVKWRSLPWEDMEMDAI 390
>gi|21070085|gb|AAM34201.1| phytochrome C [Lophopterys floribunda]
Length = 392
Score = 724 bits (1870), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/392 (85%), Positives = 366/392 (93%), Gaps = 1/392 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLV EV DLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVKEVRDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVV+ECR+ DLE YLG HYPATDIPQASRFL +KNKVRMICDCLAPPVKV
Sbjct: 61 VYKFHEDEHGEVVSECRKSDLESYLGLHYPATDIPQASRFLFIKNKVRMICDCLAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG-RK 356
IQD++L QPLSLCGSTLR+PHGCHA+YM NMG+IASLVMSVTINE +D +D DQ+Q RK
Sbjct: 121 IQDERLPQPLSLCGSTLRSPHGCHAQYMTNMGTIASLVMSVTINEDDDTMDGDQQQTTRK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHT+PRFVPFPLRYACEFLIQVFGVQ+NKEVEL+AQ+REKHIL+ QT+LCDML
Sbjct: 181 LWGLVVCHHTNPRFVPFPLRYACEFLIQVFGVQINKEVELAAQVREKHILQIQTMLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PV I+TQ+PNVMDLVKCDGAALY++ K+WLLGVTPTEEQI+DIAEWLLEYH G+TG
Sbjct: 241 LRDAPVAIITQSPNVMDLVKCDGAALYFKNKIWLLGVTPTEEQIRDIAEWLLEYHSGNTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGYPGA LGDAVCG+AAV ITS+DFLFWFRSHTAKEIKWGGAKHD KD
Sbjct: 301 LSTDSLMEAGYPGASVLGDAVCGMAAVSITSRDFLFWFRSHTAKEIKWGGAKHDPDDKDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
GRKMHPRSSFKAFLEVVK RS+PWEDVEMDAI
Sbjct: 361 GRKMHPRSSFKAFLEVVKWRSMPWEDVEMDAI 392
>gi|89330090|emb|CAJ80957.1| phytochrome A [Parentucellia viscosa]
Length = 610
Score = 724 bits (1870), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/523 (65%), Positives = 416/523 (79%), Gaps = 6/523 (1%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ L++D EPV P +VP+TAAGAL+SYKLA+KAISRLQSLPSG++ L
Sbjct: 1 SGKPFYAIIHRVTASLIVDFEPVKPHEVPMTAAGALQSYKLASKAISRLQSLPSGSMERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
C+ +V EV +LTGYDRVM+YKFH+D+HGEV+ E +P LEPY+G HYPATDIPQA+RFL
Sbjct: 61 CETMVQEVFELTGYDRVMIYKFHDDDHGEVLTEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
M+NKVRMICDC A V+VIQD+ L L+LCGSTLRAPH CH +YMENM SIASLVMSV
Sbjct: 121 MRNKVRMICDCRANHVRVIQDQNLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 340 INEAEDELDND---QEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVEL 396
+NE +E D Q R+LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKE+EL
Sbjct: 181 VNEGNEEAGPDELSQHLKRRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKELEL 240
Query: 397 SAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPT 456
Q+ EK+ILRTQT+LCDMLLRD+P+GIV+Q+PNVMDLVKCDGA L ++ + LG+TP+
Sbjct: 241 ENQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAILLHKDQKHRLGITPS 300
Query: 457 EEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRS 516
+ QI+DI WL EYHR STGLSTDSL +AG+PGALALGD VCG+AAV+IT +D+LFWFRS
Sbjct: 301 DFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDIVCGMAAVRITDRDWLFWFRS 360
Query: 517 HTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILR 576
HTA EI+WGGAKH+ G +D GRKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR
Sbjct: 361 HTASEIRWGGAKHELGERDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILR 420
Query: 577 GSLQDEVAEDSKM---IVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNV 633
+ E+ E + + + +I+ + EL +T+EMVRLIETA+VPILAV G V
Sbjct: 421 NASSKEMEERKDLEGVEIQARLNELQIDGVQELEAVTSEMVRLIETASVPILAVGVDGLV 480
Query: 634 NGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
NGW++K A+LTGL VD+AIG + LV S + V ML A
Sbjct: 481 NGWDTKIADLTGLPVDKAIGVHFLSLVEESSTEAVGKMLELAL 523
>gi|39753831|gb|AAR30463.1| PHYC [Dillenia philippinensis]
Length = 391
Score = 724 bits (1870), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/391 (85%), Positives = 367/391 (93%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGN+SLLCD LV EVSDLTGYDRVM
Sbjct: 1 DLEPVNPTDVPVTAAGALKSYKLAAKAISRLQSLPSGNMSLLCDALVQEVSDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHED+HGEVVAECRRPDLEPYLG HYPATDIPQASRFL MKNK+RMICDCLAPPV+V
Sbjct: 61 VYKFHEDDHGEVVAECRRPDLEPYLGLHYPATDIPQASRFLFMKNKIRMICDCLAPPVQV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKL 357
IQDK L QPLSLCGSTLR+PHG HA+YM NMGSIASLVMSVTINE +DE+++D+++GRKL
Sbjct: 121 IQDKCLAQPLSLCGSTLRSPHGLHAQYMANMGSIASLVMSVTINEDDDEVESDKQKGRKL 180
Query: 358 WGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLL 417
WGLVVCHHTSP+ VPFPLRYACEFLIQVFGVQVNKEVEL+AQL+EKHIL+TQTVLCDMLL
Sbjct: 181 WGLVVCHHTSPKVVPFPLRYACEFLIQVFGVQVNKEVELAAQLKEKHILKTQTVLCDMLL 240
Query: 418 RDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGL 477
RD+PVGIVTQ+PNVMDLVKCDGAALYYR K WLLG+TPTE QI+++A WLL+ H GSTGL
Sbjct: 241 RDAPVGIVTQSPNVMDLVKCDGAALYYRNKFWLLGITPTEAQIRELAGWLLDCHNGSTGL 300
Query: 478 STDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGG 537
STDSL+EAGYPGA LGDA+CG+AA+KITSKDFLFWFRSHTAKEIKWGGAKHD KD G
Sbjct: 301 STDSLMEAGYPGASILGDALCGMAAIKITSKDFLFWFRSHTAKEIKWGGAKHDPVDKDDG 360
Query: 538 RKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
+KMHPRSSFKAFL+VVK+RS PWEDVEMDAI
Sbjct: 361 KKMHPRSSFKAFLDVVKRRSFPWEDVEMDAI 391
>gi|21069947|gb|AAM34132.1| phytochrome C [Hiraea fagifolia]
Length = 392
Score = 724 bits (1869), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/392 (86%), Positives = 363/392 (92%), Gaps = 1/392 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLV EV DLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVKEVRDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVV+ECRRPDLEPYLG HYPATDIPQASRFL MKNKVRMICDCLAPPVKV
Sbjct: 61 VYKFHEDEHGEVVSECRRPDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCLAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ-GRK 356
IQDK+L QPLSLCGSTLR+PHGCHA+YM NM +IASLVMSVTINE +D +D DQ+Q RK
Sbjct: 121 IQDKRLPQPLSLCGSTLRSPHGCHAQYMTNMRTIASLVMSVTINEDDDTMDGDQQQMTRK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGL CHHTSPRFVPFPLRYACEFLIQVFGVQ+NKEVEL+AQ+REKHIL+ QT+LCDML
Sbjct: 181 LWGLGCCHHTSPRFVPFPLRYACEFLIQVFGVQINKEVELAAQVREKHILQIQTMLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PV I+TQ+PNVMDLVKCDGAALY++ K+WLLGVTP EEQI+DIAEWLLEYH G+TG
Sbjct: 241 LRDAPVAIITQSPNVMDLVKCDGAALYFKNKIWLLGVTPKEEQIRDIAEWLLEYHSGNTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGYPGA LGDAVCG+AA ITS DFLFWFRSHTAKEIKWGGAKH+ G KD
Sbjct: 301 LSTDSLMEAGYPGASVLGDAVCGMAAASITSGDFLFWFRSHTAKEIKWGGAKHEPGDKDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
GRKMHPRSSFKAFLEVVK RS+PWEDVEMDAI
Sbjct: 361 GRKMHPRSSFKAFLEVVKWRSMPWEDVEMDAI 392
>gi|39598894|gb|AAR28991.1| phytochrome C [Platanus occidentalis]
Length = 389
Score = 724 bits (1868), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/391 (87%), Positives = 362/391 (92%), Gaps = 2/391 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNPDDVPVTAAGALKSYKLAAKAIS+LQSLPS NISLLCDV+V EVSDLTGYDR+M
Sbjct: 1 DLEPVNPDDVPVTAAGALKSYKLAAKAISKLQSLPSRNISLLCDVMVREVSDLTGYDRIM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYK HEDEHGEVVAECRRPDLEPYLG HYPATDIPQ SRF+ +KNKVRMICDC APPVKV
Sbjct: 61 VYKSHEDEHGEVVAECRRPDLEPYLGLHYPATDIPQLSRFIFLKNKVRMICDCSAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKL 357
+QDKKL QPLSL GSTLRAPHGCHA+YM NMGSIASLVMSVTINE +DE DQ+ GRKL
Sbjct: 121 VQDKKLAQPLSLGGSTLRAPHGCHAQYMANMGSIASLVMSVTINEDDDE--GDQQNGRKL 178
Query: 358 WGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLL 417
WGLVVCHHTSPRFVPFPLRYACEFLIQVFG+Q+NKEVEL+AQ REKHILR QT+LCDMLL
Sbjct: 179 WGLVVCHHTSPRFVPFPLRYACEFLIQVFGIQLNKEVELAAQSREKHILRIQTMLCDMLL 238
Query: 418 RDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGL 477
RD+PVGIVTQ+PNVMDLVKCDGAALYYR K WLLG+TPTE QIKDIA W LEYH STGL
Sbjct: 239 RDAPVGIVTQSPNVMDLVKCDGAALYYRNKFWLLGITPTEAQIKDIAGWFLEYHDQSTGL 298
Query: 478 STDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGG 537
STDSL+EAGYPGAL LGDAVCG+AA+KITSKDFLFWFRSHTAKEIKWGGAKHD KD G
Sbjct: 299 STDSLMEAGYPGALVLGDAVCGMAAIKITSKDFLFWFRSHTAKEIKWGGAKHDPVDKDDG 358
Query: 538 RKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
RKM+PRSSFKAFLEVVK+RSLPWEDVEMDAI
Sbjct: 359 RKMNPRSSFKAFLEVVKRRSLPWEDVEMDAI 389
>gi|21069945|gb|AAM34131.1| phytochrome C [Hiraea fagifolia]
Length = 392
Score = 724 bits (1868), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/392 (85%), Positives = 364/392 (92%), Gaps = 1/392 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLV EV DLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVKEVRDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVV+ECRRPDLE YLG HYPATDIPQASRFL MKNKVRMICDCLAPPVKV
Sbjct: 61 VYKFHEDEHGEVVSECRRPDLESYLGLHYPATDIPQASRFLFMKNKVRMICDCLAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ-GRK 356
IQDK+L QPLSLCGSTLR+PHGCHA+YM NM +IASLVMSVTINE +D +D DQ+Q RK
Sbjct: 121 IQDKRLPQPLSLCGSTLRSPHGCHAQYMTNMRTIASLVMSVTINEDDDTMDGDQQQMTRK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQ+NKEVEL+AQ+REKHIL+ QT+LCDML
Sbjct: 181 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQINKEVELAAQVREKHILQIQTMLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PV I+TQ+PNVMDLVKCDGAALY++ K+WLLGVTP EEQI+DIAEWLLEYH G+TG
Sbjct: 241 LRDAPVAIITQSPNVMDLVKCDGAALYFKNKIWLLGVTPKEEQIRDIAEWLLEYHSGNTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGYPGA LGDA+CG+AA ITS+DFLFWFRSHTAKEIKWGGAKH+ G KD
Sbjct: 301 LSTDSLMEAGYPGASVLGDAICGMAAASITSRDFLFWFRSHTAKEIKWGGAKHEPGDKDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
GRKMHPRSSFKAFLEVVK S+PWED+EMDAI
Sbjct: 361 GRKMHPRSSFKAFLEVVKWGSMPWEDIEMDAI 392
>gi|89331101|emb|CAJ80917.1| phytochrome A [Euphrasia regelii]
Length = 619
Score = 723 bits (1867), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/525 (65%), Positives = 414/525 (78%), Gaps = 8/525 (1%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ L+ID EPV P +VP+TAAGAL+SYKLA+KAISRLQSLPSG++ L
Sbjct: 1 SGKPFYAIIHRVTASLIIDFEPVKPHEVPMTAAGALQSYKLASKAISRLQSLPSGSMERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
C+ +V EV +LTGYDRVM+YKFHED+HGEV+ E +P LEPY+G HYPATDIPQA+RFL
Sbjct: 61 CETMVQEVFELTGYDRVMIYKFHEDDHGEVLTEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDC A V+VIQD L L+LCGSTLRAPH CH +YMENM SIASLVMSV
Sbjct: 121 MKNKVRMICDCRANHVRVIQDVNLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 340 INEAEDELDNDQ-----EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEV 394
+NE +E D ++ ++LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKE+
Sbjct: 181 VNEGNEEAGPDDSSQHLDKRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEL 240
Query: 395 ELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVT 454
EL Q+ EK+ILRTQT+LCDMLLRD+P+GIV+Q+PNVMDLVKCDGA L ++ + LG+T
Sbjct: 241 ELENQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAILLHKNQKHRLGIT 300
Query: 455 PTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWF 514
P++ QI+DI WL EYHR STGLSTD L +AG+PGALALGD VCG+AAV+IT +D+LFWF
Sbjct: 301 PSDFQIRDIVSWLDEYHRDSTGLSTDGLYDAGFPGALALGDVVCGMAAVRITDRDWLFWF 360
Query: 515 RSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLI 574
RSHTA EI+WGGAKH+ G +D GRKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLI
Sbjct: 361 RSHTASEIRWGGAKHEQGERDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLI 420
Query: 575 LRGSLQDEVAEDSKM---IVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASG 631
LR + E+ E + + + +I+ + EL +T+EMVRLIETA+VPI AV G
Sbjct: 421 LRNASSKEMEERKDLEGVEIQARLNELQIDGVQELEAVTSEMVRLIETASVPIFAVGVDG 480
Query: 632 NVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
VNGWN+K A+LTGL VD+AIG + LV S + V ML A
Sbjct: 481 LVNGWNTKIADLTGLPVDKAIGVHFLSLVEESSAEAVSKMLELAL 525
>gi|89331095|emb|CAJ80914.1| phytochrome A [Esterhazya campestris]
Length = 606
Score = 723 bits (1867), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/520 (66%), Positives = 418/520 (80%), Gaps = 7/520 (1%)
Query: 163 PFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDV 222
PFYAI+HR+ ++ID EPV P +VP+TAAGAL+SYKLAAKAI+RLQ+LPSG++ LCD
Sbjct: 1 PFYAIIHRVTGSMIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQALPSGSMERLCDT 60
Query: 223 LVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKN 282
+V EV +LTGYDRVM+YKFH+D+HGEV++E +P LEPY+G HYPATDIPQA+RFL +KN
Sbjct: 61 MVQEVFELTGYDRVMIYKFHDDDHGEVLSEITKPGLEPYVGLHYPATDIPQAARFLFIKN 120
Query: 283 KVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINE 342
KVRMICDC A VKVIQD L L+LCGSTLRAPH CH +YMENM SIASLVMSV +NE
Sbjct: 121 KVRMICDCRANHVKVIQDDNLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVVVNE 180
Query: 343 A-EDELDNDQ--EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQ 399
ED D+ ++ ++LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VN+E+EL Q
Sbjct: 181 GNEDGPDSSSHPDKKKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNREIELENQ 240
Query: 400 LREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQ 459
+ EK+ILRTQT+LCDML+RD+P+GIV+Q+PNVMDLVKCDGA L Y+ K + LG+TP++ Q
Sbjct: 241 MLEKNILRTQTLLCDMLMRDAPLGIVSQSPNVMDLVKCDGAVLIYKTKKYRLGMTPSDFQ 300
Query: 460 IKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTA 519
I+DI WL EYHR STGLSTDSL +AG+PGALALGDAVCG+AAV+IT+ D+LFWFRSHTA
Sbjct: 301 IRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITNTDWLFWFRSHTA 360
Query: 520 KEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSL 579
EI+WGGAKH+ G KD GRKMHPR SFKAFLEVVK RSLPW+D EMDAIHSLQLILR +
Sbjct: 361 AEIRWGGAKHEPGEKDDGRKMHPRLSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILRNAS 420
Query: 580 QDEVAE---DSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGW 636
E E + K I + D +++ I EL +T+EMVRLIETA+VPI AVD G VNGW
Sbjct: 421 NKEAEEGDVEGKEI-HARLNDLQLDGIQELEAVTSEMVRLIETASVPIFAVDVDGLVNGW 479
Query: 637 NSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
N+K A+LTGL VD+AIGT + LV S + V ML A
Sbjct: 480 NTKIADLTGLAVDKAIGTHFLALVEDSSAEAVNKMLELAL 519
>gi|21070061|gb|AAM34189.1| phytochrome C [Lasiocarpus sp. Anderson 13834]
Length = 392
Score = 723 bits (1866), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/392 (86%), Positives = 361/392 (92%), Gaps = 1/392 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLP GNISLLCDVLV EV DLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPGGNISLLCDVLVKEVRDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVV+ECRR DLE YLG HYPA DIPQASRFL MKNKVRMICDCLAPPVKV
Sbjct: 61 VYKFHEDEHGEVVSECRRSDLESYLGLHYPAIDIPQASRFLFMKNKVRMICDCLAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ-GRK 356
IQDK+L QPLSLCGSTLR+PHGCHA+YM NMG+IASLVMSVT+NE +D +D DQ+Q RK
Sbjct: 121 IQDKRLSQPLSLCGSTLRSPHGCHAQYMANMGTIASLVMSVTVNEDDDMIDGDQQQMARK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
L GLVVCHHTSPRFVPFPLRYACEFLIQVFGVQ+NKEVEL+AQ+REKHILR QT+LCDML
Sbjct: 181 LRGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQINKEVELAAQVREKHILRIQTMLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PV I+TQ+PNVMDLVKCDGAALYY+ K WLLGVTPTE QI+DIAEWLLEYH G+TG
Sbjct: 241 LRDAPVAIITQSPNVMDLVKCDGAALYYKNKFWLLGVTPTEAQIRDIAEWLLEYHSGNTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGYPGA LGDAVCG+AAV ITS+DFLFWFRSHTAKEIKWGGAKHD KD
Sbjct: 301 LSTDSLMEAGYPGASVLGDAVCGMAAVSITSRDFLFWFRSHTAKEIKWGGAKHDPEDKDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
GRKMHPRSSFKAFLEVVK RSLPWEDVEMDAI
Sbjct: 361 GRKMHPRSSFKAFLEVVKWRSLPWEDVEMDAI 392
>gi|89331083|emb|CAJ80908.1| phytochrome A [Cordylanthus ramosus]
Length = 609
Score = 723 bits (1866), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/522 (66%), Positives = 417/522 (79%), Gaps = 5/522 (0%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ ++ID EPV P +VP+TAAGAL+SYKLAAKAI+RLQ+LPSG++ L
Sbjct: 1 SGKPFYAIIHRVTGSMIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALPSGSMERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
CD +V EV +LTGYDRVM+YKFH+D+HGEV++E +P L+PY+G HYPATDIPQA+RFL
Sbjct: 61 CDTMVQEVFELTGYDRVMIYKFHDDDHGEVLSEITKPGLDPYVGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
+KNKVRMICDC A VKVIQD L L+LCGSTLRAPH CH +YME+M SIASLVMSV
Sbjct: 121 IKNKVRMICDCRANHVKVIQDNNLPFDLTLCGSTLRAPHSCHLQYMESMNSIASLVMSVV 180
Query: 340 INEA-EDELDNDQ--EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVEL 396
+NE ED D+ ++ ++LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKE+EL
Sbjct: 181 VNEGNEDGPDSSSHPDKKKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEIEL 240
Query: 397 SAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPT 456
Q+ EK+ILRTQT+LCDMLLRD+P+GIV+Q+PNVMDLVKCDGA L ++ K + LG+TP+
Sbjct: 241 ENQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAVLIHKSKKYRLGMTPS 300
Query: 457 EEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRS 516
+ QI+DI WL EYHR STGLSTDSL +AG+PGALALGDAVCG+AAV+IT D+LFWFRS
Sbjct: 301 DFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITDTDWLFWFRS 360
Query: 517 HTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILR 576
HTA EI+WGGAKH+ KD GRKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR
Sbjct: 361 HTASEIRWGGAKHEPSDKDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILR 420
Query: 577 GSLQDEVAED--SKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVN 634
S E E ++ D +++ EL +T+EMVRLIETA+VPI AVD G VN
Sbjct: 421 NSSNKEAEERDVGGKEIHARLNDLQLDGKQELEALTSEMVRLIETASVPIFAVDMDGLVN 480
Query: 635 GWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
GWN+K A+LTGL VD+AIG L+ LV S + V ML A
Sbjct: 481 GWNTKIADLTGLLVDKAIGMHLLALVEDSSAEAVNKMLELAL 522
>gi|89330122|emb|CAJ80973.1| phytochrome A [Rhynchocorys orientalis]
Length = 612
Score = 723 bits (1866), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/525 (65%), Positives = 413/525 (78%), Gaps = 8/525 (1%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ L+ID EPV P +VP+TAAGAL+SYKLA+KAI+RLQSLP+ ++ L
Sbjct: 1 SGKPFYAIIHRVTASLIIDFEPVRPHEVPMTAAGALQSYKLASKAIARLQSLPNRSVEQL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
C+ +V EV +LTGYDRVM YKFHED+HGEV+ E +P LEPY+G HYPATDIPQA+RFL
Sbjct: 61 CETMVQEVFELTGYDRVMTYKFHEDDHGEVLTEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDC A V+VIQD+ L L+LCGSTLRAPH CH +YMENM SIASLVMSV
Sbjct: 121 MKNKVRMICDCRANHVRVIQDENLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 340 INEAEDELDNDQ-----EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEV 394
+NE DE + D+ ++ ++LWGLVVCH+ SPRFVPFPLRYACEFL QVF + VNKE+
Sbjct: 181 VNEGNDEAEPDETSQHPDKRKRLWGLVVCHNASPRFVPFPLRYACEFLAQVFAIHVNKEL 240
Query: 395 ELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVT 454
E Q+ EK+ILRTQT+LCDMLLRD+P+GIV+Q PNVMDLVKCDGA L ++ + LG+T
Sbjct: 241 ESENQMLEKNILRTQTLLCDMLLRDAPLGIVSQNPNVMDLVKCDGAILLHKNQKHRLGIT 300
Query: 455 PTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWF 514
P++ QI+DI WL EYHR STGLSTDSL +AG+PGALALGD VCG+AAV+IT +D+LFWF
Sbjct: 301 PSDFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDVVCGMAAVRITDRDWLFWF 360
Query: 515 RSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLI 574
RSHTA EI+WGGAKH+ G KD GRKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLI
Sbjct: 361 RSHTASEIRWGGAKHELGQKDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLI 420
Query: 575 LRGSLQDEVAEDSKM---IVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASG 631
LR + E+ E + + + +I+ + EL +T+EMVRLIETA+VPI AV G
Sbjct: 421 LRNASSKEMEERKDLEGVEIQARLNELQIDGVQELEAVTSEMVRLIETASVPIFAVGVDG 480
Query: 632 NVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
VNGWN+K AELTGL VD+AIG + LV S + V ML A
Sbjct: 481 LVNGWNTKIAELTGLPVDKAIGMHFLSLVEESSAEAVSKMLELAL 525
>gi|406685413|gb|AFS51147.1| phytochrome P, partial [Taxodium distichum]
Length = 531
Score = 723 bits (1865), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/482 (71%), Positives = 403/482 (83%), Gaps = 2/482 (0%)
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S +LA +A SRLQ++P+G+I LLCD +V EV +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 21 SQRLAVRATSRLQAVPNGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 80
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ ++L QPL L GSTLRA
Sbjct: 81 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRANPVRVIQAEELKQPLCLVGSTLRA 140
Query: 317 PHGCHARYMENMGSIASLVMSVTIN-EAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPL 375
PHGCHA+YM NMGSIASLVM+V +N DE + KLWGLVVCHHTSPR VPFPL
Sbjct: 141 PHGCHAQYMANMGSIASLVMAVIVNGNGNDEEGSSGRSAVKLWGLVVCHHTSPRAVPFPL 200
Query: 376 RYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLV 435
R ACEFL+Q FG+Q+N E++L+AQL E +ILRTQT+LCDMLLRD+P+GIVTQ+P++MDLV
Sbjct: 201 RSACEFLMQTFGLQINMEMQLAAQLTENNILRTQTLLCDMLLRDAPIGIVTQSPSIMDLV 260
Query: 436 KCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGD 495
KCDGAALYY GK WLLGVTPT QIKDIA+WLLEYH STGLSTDSL +AGYPGA +LGD
Sbjct: 261 KCDGAALYYGGKFWLLGVTPTGAQIKDIADWLLEYHGDSTGLSTDSLADAGYPGAASLGD 320
Query: 496 AVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQ 555
AVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD R+MHPRSSFKAFLEVVK+
Sbjct: 321 AVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDARRMHPRSSFKAFLEVVKR 380
Query: 556 RSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVR 615
RSLPWE+VEMDAIHSLQLILRGS QD ++K +V+V D +++ IDEL + +EMVR
Sbjct: 381 RSLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMVHVQLHDLKLQGIDELSSVASEMVR 440
Query: 616 LIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSS 674
LIETA VPILAVD++G VNGWN+KAAELTGL V +A+G +LV DLV +S++ V+ ML
Sbjct: 441 LIETATVPILAVDSAGIVNGWNAKAAELTGLPVGEAMGKSLVHDLVFEESMETVEKMLYH 500
Query: 675 AF 676
A
Sbjct: 501 AL 502
>gi|89330126|emb|CAJ80975.1| phytochrome A [Scrophularia arguta]
Length = 607
Score = 723 bits (1865), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/520 (65%), Positives = 413/520 (79%), Gaps = 3/520 (0%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ LVID EPV P +VP+T AGAL+SYKLA KAI+R QSLPSG++ L
Sbjct: 1 SGKPFYAIIHRVTGSLVIDFEPVKPHEVPMTTAGALQSYKLAGKAINRSQSLPSGSVERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
CD +V EV +LTGYDRVM YKFH+D+HGEV E +P LEPY G HYPATDIPQA+RFL
Sbjct: 61 CDTMVQEVFELTGYDRVMTYKFHDDDHGEVFTEVTKPGLEPYAGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDC A VKV+QD+KL L+LCG TLRAPH CH +YMENM SIASLVMSV
Sbjct: 121 MKNKVRMICDCRAEHVKVVQDEKLPFDLTLCGPTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 340 INEAEDELD--NDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELS 397
INE +E+ + ++ ++LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKE+EL
Sbjct: 181 INEGAEEVSEPSSPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELE 240
Query: 398 AQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTE 457
Q+ E++ILRTQT+LCDMLL+D+P+ IV+Q+PNVMDLVKCDGAAL Y+ K + LG+TPT+
Sbjct: 241 NQMLEENILRTQTLLCDMLLKDAPLAIVSQSPNVMDLVKCDGAALLYKNKRYRLGLTPTD 300
Query: 458 EQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSH 517
QI+D+ WL YHR STG STDSL +AG+PG+LALGDAVCG+AAVKIT+KD+LFWFRSH
Sbjct: 301 FQIRDLLSWLDTYHRDSTGFSTDSLYDAGFPGSLALGDAVCGMAAVKITNKDWLFWFRSH 360
Query: 518 TAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRG 577
TA EI+W GAKH+ G KD GRKMHPRSSF+AFLEVVK SLPW+D EMDA+HSLQLILR
Sbjct: 361 TAAEIRWSGAKHEPGEKDDGRKMHPRSSFRAFLEVVKTGSLPWKDYEMDAMHSLQLILRN 420
Query: 578 SLQDEVAEDSKM-IVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGW 636
+ ++ A+D + ++ D R++ I EL +T+EMVRLIE A+VPILAVD G VNGW
Sbjct: 421 AFREADAKDYETEAIHTRLNDLRVDGIHELEAVTSEMVRLIEAASVPILAVDVDGVVNGW 480
Query: 637 NSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
N+K A LTGLT+DQAIG + LV D V ML A
Sbjct: 481 NTKIAALTGLTIDQAIGRDFLMLVEDSCADRVSKMLELAL 520
>gi|21069969|gb|AAM34143.1| phytochrome C [Tristellateia madagascariensis]
Length = 392
Score = 722 bits (1864), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/392 (85%), Positives = 363/392 (92%), Gaps = 1/392 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVP+TAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLV EV DLTGYDRVM
Sbjct: 1 DLEPVNPADVPLTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVKEVRDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVV+ECRR DLE YLG HYPATDIPQASRFL MKNKVRMICDCLAPPVKV
Sbjct: 61 VYKFHEDEHGEVVSECRRSDLESYLGLHYPATDIPQASRFLFMKNKVRMICDCLAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ-GRK 356
IQD++L QPLSLCGSTLR+PHGCHA+YM NMG+IASLVMSVTINE +D +D DQ+Q RK
Sbjct: 121 IQDERLPQPLSLCGSTLRSPHGCHAQYMANMGTIASLVMSVTINEDDDTMDGDQQQMARK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQ+ KE+EL+AQ+REKHILR QT+LCDML
Sbjct: 181 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQITKELELAAQVREKHILRIQTMLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PVGI+TQ+PNVMDLVKCDGAAL+Y+ K WLLG+TPTE QI+DIAEWLLEYH G+TG
Sbjct: 241 LRDAPVGIITQSPNVMDLVKCDGAALFYKNKFWLLGITPTEAQIRDIAEWLLEYHSGNTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGYPGA LGDAVCG+A+V ITS+DFLFWFRSHTAKEIKWGGAK D KD
Sbjct: 301 LSTDSLMEAGYPGASVLGDAVCGMASVSITSRDFLFWFRSHTAKEIKWGGAKRDPDDKDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
GRKMHPRSSFKAFLEVVK RSLPWEDVEMDAI
Sbjct: 361 GRKMHPRSSFKAFLEVVKWRSLPWEDVEMDAI 392
>gi|21070091|gb|AAM34204.1| phytochrome C [Diplopterys cabrerana]
Length = 392
Score = 722 bits (1864), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/392 (86%), Positives = 362/392 (92%), Gaps = 1/392 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLV EV DLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVKEVRDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVV+ECRR DLEPYLG HYPATDIPQASRFL MKNKVRMICDCLAPPVKV
Sbjct: 61 VYKFHEDEHGEVVSECRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCLAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ-GRK 356
IQD +L QPLSLCGSTLR+PHGCHA+YM NMG+IASLVMSVTINE +D +D DQ+Q RK
Sbjct: 121 IQDDRLPQPLSLCGSTLRSPHGCHAQYMTNMGTIASLVMSVTINEDDDTMDGDQQQMTRK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQ+NKEV+L+ Q+REKHIL+ QT+LCDML
Sbjct: 181 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQINKEVDLAVQMREKHILQIQTMLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PV I+TQ+PNVMDLVKCDGAALY+R K WLLGVTPTEEQI+DIAEWLL+YH G+TG
Sbjct: 241 LRDAPVAIITQSPNVMDLVKCDGAALYFRNKTWLLGVTPTEEQIRDIAEWLLKYHSGNTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGYPGA ALGDAVCG+AAV ITS DFLFWFRSHTAKEIKWGGAKHD KD
Sbjct: 301 LSTDSLMEAGYPGASALGDAVCGMAAVSITSGDFLFWFRSHTAKEIKWGGAKHDPDDKDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
RKMHPRS FKAFLEVVK RS+PWEDVEMDAI
Sbjct: 361 LRKMHPRSPFKAFLEVVKWRSMPWEDVEMDAI 392
>gi|315377406|gb|ADU05540.1| phytochrome A [Tovaria pendula]
Length = 598
Score = 722 bits (1863), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/504 (68%), Positives = 410/504 (81%), Gaps = 5/504 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A VKV
Sbjct: 61 TYKFHDDDHGEVVSEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCHAKHVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD---NDQEQG 354
+QD+KL L+LCGSTLRAPH CH +YMENM SIASLVM+V +NE ++E D + Q Q
Sbjct: 121 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMSSIASLVMAVVVNEGDEESDAPNSAQAQK 180
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKE+EL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELDNQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GI++Q+PN+MDLVKCDGAAL Y+ K+W LG+TPT+ Q+ DIA WL +YHR
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKNKIWRLGITPTDSQLHDIAAWLSDYHRD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P AL LGDAVCG+AAV++TSKD +FWFRSHTA EIKWGGAKH+ G
Sbjct: 301 STGLSTDSLYDAGFPQALTLGDAVCGMAAVRVTSKDMIFWFRSHTAGEIKWGGAKHEPGE 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
KD RKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E + + ++
Sbjct: 361 KDNARKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDFNTKFLH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ + EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLKIDGMKELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDKAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAF 676
G + LV SVD VK ML A
Sbjct: 481 GNHFLTLVEDSSVDRVKKMLDMAL 504
>gi|39753873|gb|AAR30484.1| PHYC [Microdesmis puberula]
Length = 391
Score = 722 bits (1863), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/391 (85%), Positives = 362/391 (92%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPS NISLLCDVLV EVSDLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSRNISLLCDVLVKEVSDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VY+FHEDEHGEVVAEC R +LEPYLG HYPATDIPQASRFL MKNKVRMICDC APPVKV
Sbjct: 61 VYRFHEDEHGEVVAECCRTELEPYLGLHYPATDIPQASRFLFMKNKVRMICDCQAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKL 357
+QD++L QPLSLCGSTLR+PHGCHA+YM NMGS+ASLVMSVTINE +DE+ +DQ++GRKL
Sbjct: 121 LQDRRLAQPLSLCGSTLRSPHGCHAQYMANMGSVASLVMSVTINEDDDEMHSDQQKGRKL 180
Query: 358 WGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLL 417
WGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQ+NKEVEL+AQ+REKHILR QT+LCDMLL
Sbjct: 181 WGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQINKEVELAAQMREKHILRIQTLLCDMLL 240
Query: 418 RDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGL 477
RDSPV I+TQ+PNVMDLVKCDGAALYY K WLLGVTPTE QI+DI+EWLLEYH GSTGL
Sbjct: 241 RDSPVAIITQSPNVMDLVKCDGAALYYNNKFWLLGVTPTEAQIRDISEWLLEYHSGSTGL 300
Query: 478 STDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGG 537
STDSL+EAGY A LGDAVCG+AAV+ITS DFLFWFRSHTAKE+KWGGAKHD KD G
Sbjct: 301 STDSLMEAGYHRASILGDAVCGVAAVRITSNDFLFWFRSHTAKEMKWGGAKHDPVDKDDG 360
Query: 538 RKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
+KMHPRSSFKAFLEVVK RSLPWEDVEMDAI
Sbjct: 361 KKMHPRSSFKAFLEVVKWRSLPWEDVEMDAI 391
>gi|21070045|gb|AAM34181.1| phytochrome C [Mascagnia bracteosa]
Length = 392
Score = 722 bits (1863), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/392 (85%), Positives = 363/392 (92%), Gaps = 1/392 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLV EV DLT YDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVKEVRDLTRYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVV+ECRR DLE Y G HYPATDIPQASRFL MKNKVRMICDCLAPPVKV
Sbjct: 61 VYKFHEDEHGEVVSECRRSDLESYHGLHYPATDIPQASRFLFMKNKVRMICDCLAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ-GRK 356
IQDK+L QPLSLCGSTLR+PHGCHA+YM NMG+IASLVMSVT+NE +D +D DQ+Q RK
Sbjct: 121 IQDKRLPQPLSLCGSTLRSPHGCHAQYMTNMGTIASLVMSVTVNEEDDMMDGDQQQMTRK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQ+NKEVEL+AQ+REKHIL+ QT+LCDML
Sbjct: 181 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQINKEVELAAQVREKHILQIQTMLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PV I+TQ+PNVMDLVKCDGAALY++ K WLLGVTPTEEQI+DIAEWLLEYH G+TG
Sbjct: 241 LRDAPVAIITQSPNVMDLVKCDGAALYFKNKTWLLGVTPTEEQIRDIAEWLLEYHSGNTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGYPGA LGDAVCG+AAV ITS+DFLFWFRSHTAKEIKWGGAKHD KD
Sbjct: 301 LSTDSLMEAGYPGASVLGDAVCGMAAVSITSRDFLFWFRSHTAKEIKWGGAKHDPDDKDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
GRKMHPRSSFKAFLEVVK RS+PW+DVEMDAI
Sbjct: 361 GRKMHPRSSFKAFLEVVKWRSMPWDDVEMDAI 392
>gi|89331135|emb|CAJ80934.1| phytochrome A [Lindenbergia muraria]
Length = 611
Score = 721 bits (1862), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/523 (65%), Positives = 418/523 (79%), Gaps = 7/523 (1%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ L++D EPV DVP+TAAGAL+SY+LAAKAI+RLQSLPSG++ L
Sbjct: 1 SGKPFYAIIHRVTGSLIVDFEPVKLHDVPMTAAGALQSYELAAKAITRLQSLPSGSMERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
CD + EV +LTGYDRVM+YKFH+D+HGEV+ E +P LEPY+G HYPATDIPQA+RFL
Sbjct: 61 CDTMAQEVFELTGYDRVMIYKFHDDDHGEVITEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDC + VKV+QD L L+LCGSTLRAPH CHA+YM NM SIASLVMSV
Sbjct: 121 MKNKVRMICDCRSNNVKVVQDGNLPFDLTLCGSTLRAPHSCHAQYMGNMTSIASLVMSVV 180
Query: 340 INEAEDE------LDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKE 393
+NE E+E + ++ ++LWGLVVCH+T+PRFVPFPLRYACEFL QVF + +NKE
Sbjct: 181 VNEGEEEASSPDSSSSHPDKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHINKE 240
Query: 394 VELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGV 453
VEL Q+ EK+ILRTQT+LCDMLLRD+P+G+V+Q+PN+MDLVKCDGA L Y+ + + G+
Sbjct: 241 VELENQMLEKNILRTQTLLCDMLLRDAPLGVVSQSPNIMDLVKCDGAMLLYKNEKYRFGL 300
Query: 454 TPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFW 513
TP++ QI+DI WL EYHR STGLSTDSL +AG+PGALALGDAVCG+AAV+IT D+LFW
Sbjct: 301 TPSDFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITGGDWLFW 360
Query: 514 FRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQL 573
FRSHTA EI+WGGAKH+ G KD G KMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQL
Sbjct: 361 FRSHTAAEIRWGGAKHELGEKDDGGKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQL 420
Query: 574 ILRGSLQDEVAEDSKMIVNVPSVDD-RIEKIDELRIITNEMVRLIETAAVPILAVDASGN 632
ILR + ++ +D + + ++D +I+ I EL +T+EMVRLIETA+VPI AVD G
Sbjct: 421 ILRNAAREAEKKDWEGVELQARLNDLQIDGIQELEAVTSEMVRLIETASVPIFAVDGDGL 480
Query: 633 VNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSA 675
VNGWN+K ++LTGL VD+AIGT + LV S D V ML A
Sbjct: 481 VNGWNTKISDLTGLPVDKAIGTHFLHLVEDSSADTVSKMLELA 523
>gi|89331053|emb|CAJ80893.1| phytochrome A [Bungea trifida]
Length = 609
Score = 721 bits (1862), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/522 (67%), Positives = 413/522 (79%), Gaps = 5/522 (0%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ L+ID EPV P +VP+TAAGAL+SYKLAAKAI+RLQ+LPSG++ L
Sbjct: 1 SGKPFYAIIHRVTGSLIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALPSGSLERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
CD LV EV +LTGYDRVMVY+FH+D+HGEV E +P LEPY G HYPATDIPQA+RFL
Sbjct: 61 CDTLVQEVFELTGYDRVMVYRFHDDDHGEVFTEITKPGLEPYAGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDC A VKV+QD L L+LCGSTLRAPH CH +YMENM SIASLVMSV
Sbjct: 121 MKNKVRMICDCRANQVKVVQDGNLSFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 340 I---NEAEDELDNDQEQGRK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVE 395
NE E D+ Q RK LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKE+E
Sbjct: 181 GYEGNEEESGSDSSQPDKRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKELE 240
Query: 396 LSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTP 455
L Q+ EK+ILRTQT+LCDMLLRD+P+GIV+Q+PNVMDLVKCDG+ L ++ K + LG+TP
Sbjct: 241 LENQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGSLLLHKDKKYRLGLTP 300
Query: 456 TEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFR 515
++ QI+DI WL EYHR STGLSTDSL +AG+ GALALGDA+CG+AAV+IT KD+L WFR
Sbjct: 301 SDFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFQGALALGDAICGMAAVRITDKDWLSWFR 360
Query: 516 SHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLIL 575
SHTA EI+WGGAKH+ G KD GRKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLIL
Sbjct: 361 SHTAAEIRWGGAKHEQGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLIL 420
Query: 576 RGSLQDEVAED-SKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVN 634
R S ++ +D ++ + +I + EL +T+EMVRLIETA+VPI AVDA G VN
Sbjct: 421 RNSSKETKGKDLDSRAIHEKLNELQIGGMQELEAVTSEMVRLIETASVPIFAVDADGLVN 480
Query: 635 GWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
GWN+K ++LTGL VD+ IGT + LV S D V ML A
Sbjct: 481 GWNTKISDLTGLPVDKVIGTHFLGLVEETSADTVSKMLEFAL 522
>gi|39753869|gb|AAR30482.1| PHYC [Mesua sp. Coode 7884]
Length = 391
Score = 721 bits (1861), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/391 (84%), Positives = 362/391 (92%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAIS+LQSLPSGNISLLCDVLV EV +LTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKAISKLQSLPSGNISLLCDVLVKEVCELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHED+HGEVVAECRRPDLEPYLG HYPATDIPQASRFL MK+KVRMICDCLAPP KV
Sbjct: 61 VYKFHEDDHGEVVAECRRPDLEPYLGLHYPATDIPQASRFLFMKDKVRMICDCLAPPAKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKL 357
IQD L Q LSLCGSTLRAPHGCHA+YMENMGSIASLVMSVTIN+ +DE+ +D+++GRKL
Sbjct: 121 IQDNGLTQALSLCGSTLRAPHGCHAQYMENMGSIASLVMSVTINDDDDEMASDRQKGRKL 180
Query: 358 WGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLL 417
WGLVVCHHT PRFVPFPLRYACEFLIQVFG+Q+ KE EL+AQ+REKHIL TQTVLCDMLL
Sbjct: 181 WGLVVCHHTGPRFVPFPLRYACEFLIQVFGIQITKEAELAAQIREKHILETQTVLCDMLL 240
Query: 418 RDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGL 477
RDSP+ IV Q+PNVMDLVKCDGAALY++ K WLLG+TPTE QI+DI+EWLL+YH GSTGL
Sbjct: 241 RDSPMAIVIQSPNVMDLVKCDGAALYFKEKFWLLGITPTEAQIRDISEWLLDYHNGSTGL 300
Query: 478 STDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGG 537
STDSL+EAGYPGA LGDAVCG+AA+++ SKDFLFWFRSHTAKEIKWGGAKHD G KD G
Sbjct: 301 STDSLMEAGYPGASILGDAVCGMAAIRVNSKDFLFWFRSHTAKEIKWGGAKHDPGDKDEG 360
Query: 538 RKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
RKMHPRSSFKAFLEVVK RSLPWED+EMDAI
Sbjct: 361 RKMHPRSSFKAFLEVVKWRSLPWEDMEMDAI 391
>gi|89330114|emb|CAJ80969.1| phytochrome A [Rhinanthus alectorolophus]
Length = 614
Score = 721 bits (1861), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/525 (64%), Positives = 415/525 (79%), Gaps = 8/525 (1%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ L+ID EPV P +VP+TAAGAL+SYKLA+KAI+RLQ+L G+I L
Sbjct: 1 SGKPFYAIIHRVTASLIIDFEPVKPHEVPMTAAGALQSYKLASKAIARLQALSGGSIERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
C+ +V EV +LTGYDRVM YKFHED+HGEV+ E +P LEPY+G HYPATDIPQA+RFL
Sbjct: 61 CETMVQEVFELTGYDRVMTYKFHEDDHGEVLTEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDC A V+VIQD+ L L+LCGSTLRAPH CH +YMENM SIASLVMSV
Sbjct: 121 MKNKVRMICDCRANHVRVIQDENLPMDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 340 INEAEDELDNDQ-----EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEV 394
+NE +E D+ ++ ++LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKE+
Sbjct: 181 VNEGNEEAAPDETPQQLDKRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEI 240
Query: 395 ELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVT 454
E+ Q+ EK+ILRTQT+LCDMLLRD+P+GIV+Q+PNVMDLVKCDG+ L ++ + + LG+T
Sbjct: 241 EMENQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGSILLHKNQKYRLGIT 300
Query: 455 PTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWF 514
P++ QI+DI WL EYHR STGLSTDSL +AG+PGALALGD VCG+AAV+IT +D+LFWF
Sbjct: 301 PSDFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDVVCGMAAVRITDRDWLFWF 360
Query: 515 RSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLI 574
RSHTA EI+WGGAKH+ G +D GRKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLI
Sbjct: 361 RSHTASEIRWGGAKHELGERDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLI 420
Query: 575 LRGSLQDEVAEDSKM---IVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASG 631
LR + E+ E + + + +I+ + EL +T+EMVRLIETA+VPI AV G
Sbjct: 421 LRNASSKEMEERKDLEGVEIQARLNELQIDGVQELEAVTSEMVRLIETASVPIFAVGVDG 480
Query: 632 NVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
VNGWN+K A+LTGL VD+AIG + LV S + V ML A
Sbjct: 481 LVNGWNTKIADLTGLPVDKAIGLHFLSLVEESSAEAVSKMLELAL 525
>gi|89331041|emb|CAJ80887.1| phytochrome A [Bartsia trixago]
Length = 612
Score = 721 bits (1861), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/525 (64%), Positives = 413/525 (78%), Gaps = 8/525 (1%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ L++D EPV P +VP+TAAGAL+SYKLA+KAISRLQSLPSG++ L
Sbjct: 1 SGKPFYAIIHRVTASLIVDFEPVKPHEVPMTAAGALQSYKLASKAISRLQSLPSGSMERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
C+ +V EV +LTGYDRVM+YKFH+D+HGEV+ E +P LEPY+G HYPATDIPQA+RFL
Sbjct: 61 CETMVQEVFELTGYDRVMIYKFHDDDHGEVLTEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
M+NKVRMICDC A V+VIQD+ L L+LCGSTLRAPH CH +YMENM SIASLVMSV
Sbjct: 121 MRNKVRMICDCRANHVRVIQDQNLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 340 INEAEDELDNDQ-----EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEV 394
+NE +E D ++ ++LWGLVVCH+TSPR VPFPLRYACEFL QVF + VNKE+
Sbjct: 181 VNEGNEEAGRDDSSLHLDKRKRLWGLVVCHNTSPRLVPFPLRYACEFLAQVFAIHVNKEL 240
Query: 395 ELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVT 454
EL Q+ EK+ILRTQT+LCDMLLRD+P+GIV+Q+PNVMDLVKC+GA L Y+ K LG+T
Sbjct: 241 ELENQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCEGAILLYKDKKHRLGIT 300
Query: 455 PTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWF 514
P++ QI+DI WL EYHR STGLSTDSL +AG+PGALALGD VCG+AAV+IT +D+LFWF
Sbjct: 301 PSDFQIRDIISWLDEYHRDSTGLSTDSLYDAGFPGALALGDIVCGMAAVRITDRDWLFWF 360
Query: 515 RSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLI 574
RSHTA EI+WGGAKH+ G +D GRKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLI
Sbjct: 361 RSHTASEIRWGGAKHELGERDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLI 420
Query: 575 LRGSLQDEVAEDSKM---IVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASG 631
LR E+ E + + + +I+ + EL +T+EMVRLIETA+VPI AV G
Sbjct: 421 LRNVSSKEMEERKDLEGVEIQARLNELQIDGVQELEAVTSEMVRLIETASVPIFAVGVDG 480
Query: 632 NVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
VNGWN+K A+LT L VD+AIG + LV S + V ML A
Sbjct: 481 LVNGWNTKIADLTALQVDKAIGVHFLSLVEDSSAEAVSKMLEQAL 525
>gi|89330120|emb|CAJ80972.1| phytochrome A [Rhinanthus minor]
Length = 612
Score = 721 bits (1861), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/525 (64%), Positives = 415/525 (79%), Gaps = 8/525 (1%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ L+ID EPV P +VP+TAAGAL+SYKLA+KAI+RLQ+L G+I L
Sbjct: 1 SGKPFYAIIHRVTASLIIDFEPVKPHEVPMTAAGALQSYKLASKAIARLQALSGGSIERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
C+ +V EV +LTGYDRVM YKFHED+HGEV+ E +P LEPY+G HYPATDIPQA+RFL
Sbjct: 61 CETMVQEVFELTGYDRVMTYKFHEDDHGEVLTEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDC A V+VIQD+ L L+LCGSTLRAPH CH +YMENM SIASLVMSV
Sbjct: 121 MKNKVRMICDCRANHVRVIQDENLPMDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 340 INEAEDELDNDQ-----EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEV 394
+NE +E D+ ++ ++LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKE+
Sbjct: 181 VNEGNEEAAPDETPQQLDKRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEI 240
Query: 395 ELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVT 454
E+ Q+ EK+ILRTQT+LCDMLLRD+P+G+V+Q+PNVMDLVKCDG+ L ++ + + LG+T
Sbjct: 241 EMENQMLEKNILRTQTLLCDMLLRDAPLGMVSQSPNVMDLVKCDGSILLHKNQKYRLGIT 300
Query: 455 PTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWF 514
P++ QI+DI WL EYHR STGLSTDSL +AG+PGALALGD VCG+AAV+IT +D+LFWF
Sbjct: 301 PSDFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDVVCGMAAVRITDRDWLFWF 360
Query: 515 RSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLI 574
RSHTA EI+WGGAKH+ G +D GRKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLI
Sbjct: 361 RSHTASEIRWGGAKHELGERDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLI 420
Query: 575 LRGSLQDEVAEDSKM---IVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASG 631
LR + E+ E + + + +I+ + EL +T+EMVRLIETA+VPI AV G
Sbjct: 421 LRNASSKEMEERKDLEGVEIQARLNELQIDGVQELEAVTSEMVRLIETASVPIFAVGVDG 480
Query: 632 NVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
VNGWN+K A+LTGL VD+AIG + LV S + V ML A
Sbjct: 481 LVNGWNTKIADLTGLPVDKAIGLHFLSLVEESSAEAVSKMLELAL 525
>gi|40647511|gb|AAR88469.1| phytochrome C [Amorimia rigida]
Length = 392
Score = 721 bits (1860), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/392 (85%), Positives = 363/392 (92%), Gaps = 1/392 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLV EV DLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVREVRDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVV+ECRR DLE YLG HYPATDIPQASRFL MKNKVRMICDCLAPPVKV
Sbjct: 61 VYKFHEDEHGEVVSECRRSDLESYLGLHYPATDIPQASRFLFMKNKVRMICDCLAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ-GRK 356
IQD++L QPLSLCGSTLR+PHGCHA+YM NMG+IASLVMSVTINE +D +D DQ Q RK
Sbjct: 121 IQDERLPQPLSLCGSTLRSPHGCHAQYMTNMGTIASLVMSVTINEDDDMMDGDQPQMARK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQ+NKEVEL+AQ+REKHIL+ QT+LCDML
Sbjct: 181 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQINKEVELAAQVREKHILQIQTMLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PV I+TQ+PNVMDLVKCDGAALY++ + WLLGVTPTEEQI+DIAEWLLEYH G+TG
Sbjct: 241 LRDAPVAIITQSPNVMDLVKCDGAALYFKNRTWLLGVTPTEEQIRDIAEWLLEYHSGNTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGYPGA ALGDAVCG+A+V ITS+DFL WFRSHTAKEIKWGGAKHD KD
Sbjct: 301 LSTDSLMEAGYPGASALGDAVCGMASVSITSRDFLLWFRSHTAKEIKWGGAKHDPEDKDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
GRKMHPRSSFKAFLEVVK RS PWED+EMDAI
Sbjct: 361 GRKMHPRSSFKAFLEVVKWRSKPWEDIEMDAI 392
>gi|315377402|gb|ADU05538.1| phytochrome A [Moringa oleifera]
Length = 596
Score = 721 bits (1860), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/504 (68%), Positives = 409/504 (81%), Gaps = 5/504 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG+I LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSIERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEV++E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A +KV
Sbjct: 61 AYKFHDDDHGEVISEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCHAKHIKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDND---QEQG 354
+QD+KL L+LCGSTLRAPH CH +YMENM SIASLVM+V +NE ++E D Q Q
Sbjct: 121 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNEGDEETDGANPVQPQK 180
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKE+EL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GIV+Q PN+MDLVKCDGAAL Y+ KLW LGVTPT+ Q+ +IA WL +YH
Sbjct: 241 DMLMRDAPLGIVSQIPNIMDLVKCDGAALLYKSKLWRLGVTPTDVQLHEIASWLSDYHMD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+PGALALGD V G+AAV+ITSKD LFWFRSHTA EI+WGGAKH+ G
Sbjct: 301 STGLSTDSLYDAGFPGALALGDVVSGMAAVRITSKDMLFWFRSHTAAEIRWGGAKHEPGE 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
KD GRKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D + E + ++
Sbjct: 361 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDTKTVEFNTKTIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D ++E + EL +T+EMVRLIETA VPILAVD +G +NGWN+K +ELTGL VD+AI
Sbjct: 421 SKLNDLKLEGMQELEAVTSEMVRLIETATVPILAVDVNGLLNGWNTKISELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAF 676
G L+ LV S+D VK ML A
Sbjct: 481 GKHLLTLVEDSSIDTVKKMLYMAL 504
>gi|21070059|gb|AAM34188.1| phytochrome C [Stigmaphyllon paralias]
Length = 392
Score = 721 bits (1860), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/392 (85%), Positives = 364/392 (92%), Gaps = 1/392 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLV EV DLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVKEVRDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVV+ECRR DLE YLG HYPATDIPQASRFL MKNKVRMICDCLAPPVKV
Sbjct: 61 VYKFHEDEHGEVVSECRRSDLESYLGLHYPATDIPQASRFLFMKNKVRMICDCLAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ-GRK 356
IQD++L QPLSLCGSTLR+PHGCHA+YM NMG+IASLVMSVTINE +D +D DQ+Q RK
Sbjct: 121 IQDERLPQPLSLCGSTLRSPHGCHAQYMTNMGTIASLVMSVTINEDDDTMDGDQQQMTRK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQ+NKEVEL+AQ+REKHIL+ QT+LCDML
Sbjct: 181 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQINKEVELAAQIREKHILQIQTMLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PV I+TQ+PNVMDLVKCDGAALY++ K WLLGVTPTEEQI+DIA+WLLEYH G+TG
Sbjct: 241 LRDAPVAIITQSPNVMDLVKCDGAALYFKNKTWLLGVTPTEEQIRDIAQWLLEYHSGNTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGYPGA AL DAVCG+AAV ITS+DFLFWFRSHTAKE+KWGGAKH+ KD
Sbjct: 301 LSTDSLMEAGYPGASALRDAVCGMAAVSITSRDFLFWFRSHTAKEVKWGGAKHEPDDKDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
RKMHPRSSFKAFLEVVK RS+PWEDVEMDAI
Sbjct: 361 LRKMHPRSSFKAFLEVVKWRSMPWEDVEMDAI 392
>gi|21069993|gb|AAM34155.1| phytochrome C [Triaspis hypericoides]
Length = 392
Score = 721 bits (1860), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/392 (86%), Positives = 361/392 (92%), Gaps = 1/392 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLV EV DLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVKEVRDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVV+ECRR DLE YLG HYPATDIPQASRFL MKNKVRMICDC+APPVKV
Sbjct: 61 VYKFHEDEHGEVVSECRRSDLESYLGLHYPATDIPQASRFLFMKNKVRMICDCVAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ-GRK 356
IQDK+L QPLSLCGSTLR+PHGCHA+YM NMG IASLVMSVT+NE +D +D DQ Q RK
Sbjct: 121 IQDKRLPQPLSLCGSTLRSPHGCHAQYMTNMGIIASLVMSVTVNEEDDMVDGDQLQMARK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS RFVPFPLRYACEFLIQVFGVQ+NKEVEL+AQ+REKHIL+ QT+LCDML
Sbjct: 181 LWGLVVCHHTSTRFVPFPLRYACEFLIQVFGVQINKEVELAAQVREKHILQIQTMLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PV I+TQ+PNVMDLVKCDGAALY++ K WLLGVTPTEEQI+DIAEWLLEYH G+TG
Sbjct: 241 LRDAPVAIITQSPNVMDLVKCDGAALYFKNKTWLLGVTPTEEQIRDIAEWLLEYHSGNTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGYPGA ALGDAVCG+AAV ITS DFL WFRSHTAKEIKWGGAKHD KD
Sbjct: 301 LSTDSLMEAGYPGASALGDAVCGMAAVSITSTDFLLWFRSHTAKEIKWGGAKHDPDDKDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
GRKMHPRSSFKAFLEVVK RS+PWEDVEMDAI
Sbjct: 361 GRKMHPRSSFKAFLEVVKWRSMPWEDVEMDAI 392
>gi|89330124|emb|CAJ80974.1| phytochrome A [Schwalbea americana]
Length = 612
Score = 721 bits (1860), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/526 (66%), Positives = 415/526 (78%), Gaps = 10/526 (1%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ L+ID EPV P +VP+TAAGAL+SYKLAAKAI+RLQ+LPSG++ L
Sbjct: 1 SGKPFYAIIHRVTGSLIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALPSGSLERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
CD + EV +LTGYDRVMVY+FH+D+HGEV E +P LEPY G HYPATDIPQA+RFL
Sbjct: 61 CDTMAQEVFELTGYDRVMVYRFHDDDHGEVFTEITKPGLEPYAGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDC VKV+QD L L+LCGSTLRAPH CH +YMENM SIASLVMSV
Sbjct: 121 MKNKVRMICDCRLNHVKVVQDGNLGFDLTLCGSTLRAPHSCHVQYMENMNSIASLVMSVV 180
Query: 340 INEAEDE-----LDNDQEQGRK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKE 393
+NE E+E LD Q RK LWGLVVCH+TSPRFVPFPLRYACEFL QVF + V+KE
Sbjct: 181 VNEGEEESSGPGLDTSQLDKRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVSKE 240
Query: 394 VELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGV 453
+EL Q+ EK+ILRTQT+LCDMLLRD+P+GIVTQ+PNVMDLVKCDGA L ++G + LG+
Sbjct: 241 LELENQMLEKNILRTQTLLCDMLLRDAPLGIVTQSPNVMDLVKCDGALLLHKGIKYRLGL 300
Query: 454 TPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFW 513
TPT+ Q++D+ WL EYHR STGLS+DSL + G+PGALALGDA+CG+AAV+IT K++LFW
Sbjct: 301 TPTDFQLRDLVSWLDEYHRDSTGLSSDSLYDGGFPGALALGDAICGMAAVRITDKEWLFW 360
Query: 514 FRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQL 573
FRSHTA EI+WGGAKH+S KD GRKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQL
Sbjct: 361 FRSHTAAEIRWGGAKHESAEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQL 420
Query: 574 ILRGSLQDEVAEDSKM---IVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDAS 630
ILR + E A+D + + + +I+ + EL +T+EMVRLIETA+VPI AV
Sbjct: 421 ILRNTSLKE-ADDKDLGGREIQEKLGELQIDGMHELEAVTSEMVRLIETASVPIFAVGVD 479
Query: 631 GNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
G VNGWN+K A+LTGL VD+AIG + LV S D V ML SA
Sbjct: 480 GLVNGWNTKIADLTGLHVDEAIGKHFLGLVEETSADAVSKMLESAL 525
>gi|89330106|emb|CAJ80965.1| phytochrome A [Pedicularis tuberosa]
Length = 612
Score = 720 bits (1859), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/525 (65%), Positives = 419/525 (79%), Gaps = 8/525 (1%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ L++D EPV P +VP+TAAGAL+SYKLAAKAI+RLQ+LPSG++ L
Sbjct: 1 SGKPFYAIIHRVTGSLIVDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALPSGSLERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
CD +V EV +LTGYDRVM+YKFH+D+HGEV++E +P LEPY+G HYPATDIPQA+RFL
Sbjct: 61 CDTMVQEVFELTGYDRVMIYKFHDDDHGEVLSEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDC A V+VIQD L L+LCGSTLRAPH CH +YMENM SIASLVMSV
Sbjct: 121 MKNKVRMICDCRANHVRVIQDDNLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 340 INEA-EDELDNDQ-----EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKE 393
+NE ED D+ ++ ++LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKE
Sbjct: 181 VNEGNEDGPDSSSSSSHPDKKKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKE 240
Query: 394 VELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGV 453
+EL Q EK+ILRTQT+LCDMLLRD+P+GIV+++PNVMDLVKC+GA L ++ K + LG+
Sbjct: 241 IELENQTLEKNILRTQTLLCDMLLRDAPLGIVSKSPNVMDLVKCNGAILIHKTKKYRLGM 300
Query: 454 TPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFW 513
TP++ QI+DI WL EYHR STGLSTDSL +AG+PGALALGDAVCG+AAV+IT +D+LFW
Sbjct: 301 TPSDFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITDEDWLFW 360
Query: 514 FRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQL 573
FRSHTA EI+WGGAKH+ G KD GRKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQL
Sbjct: 361 FRSHTAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQL 420
Query: 574 ILRGSLQDEVAE--DSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASG 631
ILR + E E + ++ D +++ I EL +T+EMVRLIETA+VPI AV G
Sbjct: 421 ILRNASNKEAEERDTNGKEIHARLNDLQLDGIQELEAVTSEMVRLIETASVPIFAVGVDG 480
Query: 632 NVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
VNGWN+K A+LTGL VD+A+G+ V LV S + V ML A
Sbjct: 481 LVNGWNTKIADLTGLPVDKAMGSHFVALVDDSSAEAVNKMLELAL 525
>gi|21070023|gb|AAM34170.1| phytochrome C [Tristellateia africana]
Length = 392
Score = 720 bits (1859), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/392 (85%), Positives = 362/392 (92%), Gaps = 1/392 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLV EV DLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVKEVRDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVV+ECRR DLE YLG HYPATDIPQASRFL MKNKVRMICDCLAP VKV
Sbjct: 61 VYKFHEDEHGEVVSECRRSDLESYLGLHYPATDIPQASRFLFMKNKVRMICDCLAPQVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ-GRK 356
IQD++L QPLSLCGSTLR+PHGCHA+YM NMG+IASLVMSVTINE +D +D DQ+Q RK
Sbjct: 121 IQDERLPQPLSLCGSTLRSPHGCHAQYMANMGTIASLVMSVTINEDDDTMDGDQQQMARK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTSP+FVPFPLRYACEFLIQVFGVQ+NKE+EL+AQ+REKHILR QT+LCDML
Sbjct: 181 LWGLVVCHHTSPQFVPFPLRYACEFLIQVFGVQINKEIELAAQVREKHILRIQTMLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PVGI+TQ+PNVMDLVKCDGAAL+Y+ K WLLG+TPTE QI+DIAEWLLEYH G+TG
Sbjct: 241 LRDAPVGIITQSPNVMDLVKCDGAALFYKNKFWLLGITPTEAQIRDIAEWLLEYHSGNTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGYPGA LGD VCG+A+V ITS+DFLFWFRSHTAKEIKWGGAKHD KD
Sbjct: 301 LSTDSLMEAGYPGASVLGDTVCGMASVSITSRDFLFWFRSHTAKEIKWGGAKHDPDDKDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
GRKMHPRSSFK FLEVVK RSLPWED+EMDAI
Sbjct: 361 GRKMHPRSSFKVFLEVVKWRSLPWEDMEMDAI 392
>gi|89331157|emb|CAJ80945.1| phytochrome A [Odontites himalayicus]
Length = 612
Score = 720 bits (1859), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/525 (64%), Positives = 414/525 (78%), Gaps = 8/525 (1%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ ++D EPV P +VP+TAAGAL+SYKLA+KAISRLQ+LPSG+I L
Sbjct: 1 SGKPFYAIIHRVTASFIVDFEPVKPHEVPMTAAGALQSYKLASKAISRLQALPSGSIERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
C+ +V EV +LTGYDRVM+YKFHED+HGEV+ E +P LEPY+G HYPATDIPQA+RFL
Sbjct: 61 CETMVQEVFELTGYDRVMIYKFHEDDHGEVLTEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
+KNKVRMICDC A V+VIQD+KL L+LCGSTLRAPH CH +YMENM SIASLVMSV
Sbjct: 121 IKNKVRMICDCRANHVRVIQDEKLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 340 INEAEDELDNDQ-----EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEV 394
+NE +E D ++ ++LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKE+
Sbjct: 181 VNEGNEEAGPDDSSQHPDKKKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEL 240
Query: 395 ELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVT 454
EL Q+ EK+ILRTQT+LCDMLLRD+P+GIV+Q+PNVMDLVKCDGA L ++ + LG+T
Sbjct: 241 ELENQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAILLHKNNKYRLGIT 300
Query: 455 PTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWF 514
P++ I+DI WL EYHR STGLSTDSL +AG+PGALALGD VCG+AAV+IT +D+LFWF
Sbjct: 301 PSDFPIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDVVCGMAAVRITDRDWLFWF 360
Query: 515 RSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLI 574
RSHTA EI+WGGAKH+ G +D GRKMHPRSSFKAFLEVVK RSLPW+D EMDAIHS QLI
Sbjct: 361 RSHTASEIRWGGAKHELGERDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSSQLI 420
Query: 575 LRGSLQDEVAEDSKM---IVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASG 631
LR + E+ E + + + +I+ + EL +T+EMVRLIETA+VPI AV G
Sbjct: 421 LRNASSKEMEERKDLEGVEIQARLNELQIDGVQELEAVTSEMVRLIETASVPIFAVGVDG 480
Query: 632 NVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
VNGWN+K A+LTGL VD+AIG + LV S + V ML A
Sbjct: 481 LVNGWNTKIADLTGLPVDKAIGVHFLSLVEESSAEAVSKMLELAL 525
>gi|89330088|emb|CAJ80956.1| phytochrome A [Parentucellia latifolia]
Length = 610
Score = 720 bits (1858), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/523 (65%), Positives = 414/523 (79%), Gaps = 6/523 (1%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ L+ID EPV P +VP+TAAGAL+SYKLA+KAISRLQSLPSG++ L
Sbjct: 1 SGKPFYAIIHRVTGSLIIDFEPVKPHEVPMTAAGALQSYKLASKAISRLQSLPSGSMERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
C+ +V EV +LTGYDRVM+YKFH+D+HGEV+AE +P LEPY+G HYPATDIPQA+RFL
Sbjct: 61 CETMVQEVFELTGYDRVMIYKFHDDDHGEVLAEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
M+NKVRMICDC A V+VIQD+ L L+LCGSTLRAPH CH +YMENM SIASLVMSV
Sbjct: 121 MRNKVRMICDCRANHVRVIQDQNLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 340 INEAEDELDND---QEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVEL 396
+NE +E+ D Q R+LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKE+EL
Sbjct: 181 VNEGNEEVGPDEISQHLKRRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKELEL 240
Query: 397 SAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPT 456
Q+ EK+ILRTQT+LCDMLLRD+P+GIV+Q+P+VMDLVKCDGA L ++ + LG+TP+
Sbjct: 241 ENQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPDVMDLVKCDGAILLHKDQKHRLGITPS 300
Query: 457 EEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRS 516
+ QI+DI WL EYHR STGLSTDSL +AGYPGALALGD VCG+AAV+IT +D+LFWFRS
Sbjct: 301 DFQIRDIVSWLDEYHRDSTGLSTDSLYDAGYPGALALGDIVCGMAAVRITDRDWLFWFRS 360
Query: 517 HTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILR 576
HTA EI+WGGAKH+ G +D GRKMHPRSSFKA LEVVK RSLPW+D EMDAIHSLQLILR
Sbjct: 361 HTASEIRWGGAKHELGERDDGRKMHPRSSFKASLEVVKTRSLPWKDFEMDAIHSLQLILR 420
Query: 577 GSLQDEVAEDSKM---IVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNV 633
+ E+ E + + + I+ + EL +T+EMVRLIETA+VPI AV G V
Sbjct: 421 NASSKEMEERKDLEGVEIQARLNELHIDGVQELEAVTSEMVRLIETASVPIFAVGVDGLV 480
Query: 634 NGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
NGWN+K A+LT L VD+AIG + LV S + V ML A
Sbjct: 481 NGWNTKIADLTELPVDKAIGVHFLSLVEDSSAEAVSKMLELAL 523
>gi|51320425|gb|AAU00363.1| phytochrome [Euonymus alatus]
Length = 391
Score = 720 bits (1858), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/391 (85%), Positives = 363/391 (92%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVP+TAAGALKSYKLAAKAISRLQSLPS N+SLLCDVL EVS+LTGYDRVM
Sbjct: 1 DLEPVNPADVPITAAGALKSYKLAAKAISRLQSLPSSNMSLLCDVLAKEVSELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFH+D+HGEVV+EC RPDLEPYLG HYPATDIPQASRFL MKNKVRMICDCLAPPVKV
Sbjct: 61 VYKFHDDDHGEVVSECCRPDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCLAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKL 357
+QDK+L QPLSL GSTLR+PHGCH +YM NMGSIASLVMSVTINE +DE ++DQ+ GRKL
Sbjct: 121 LQDKRLSQPLSLGGSTLRSPHGCHTQYMTNMGSIASLVMSVTINEDDDETNSDQKIGRKL 180
Query: 358 WGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLL 417
WGLVVCHHT+PRFVPFPLRYACEFLIQVFGVQ+NKEVEL+ QL+EKHILRTQT+LCDMLL
Sbjct: 181 WGLVVCHHTTPRFVPFPLRYACEFLIQVFGVQINKEVELAKQLKEKHILRTQTLLCDMLL 240
Query: 418 RDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGL 477
RD+PVGI+TQ+PNVMDLVKC GA LYYR K WLLGVTPTE QIKDIAEWLL+YH STGL
Sbjct: 241 RDAPVGILTQSPNVMDLVKCHGAVLYYRNKFWLLGVTPTETQIKDIAEWLLDYHSESTGL 300
Query: 478 STDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGG 537
STDSLVEAG+P A LG+AVCG+AAVKITSKDFLFWFRSHTAKE+KWGGAKHD G KD G
Sbjct: 301 STDSLVEAGFPDASILGEAVCGMAAVKITSKDFLFWFRSHTAKEMKWGGAKHDPGDKDDG 360
Query: 538 RKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
++MHPRSSFKAFLEVVKQRSLPWEDVEMDAI
Sbjct: 361 KRMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 391
>gi|21070077|gb|AAM34197.1| phytochrome C [Spachea correae]
Length = 392
Score = 720 bits (1858), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/392 (86%), Positives = 363/392 (92%), Gaps = 1/392 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPV+AAGALKSYKLAA+AISRLQSLPSGNISLLCDVLV EV DLTGYDRVM
Sbjct: 1 DLEPVNPADVPVSAAGALKSYKLAARAISRLQSLPSGNISLLCDVLVKEVRDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVV+ECRRPDLE YLG HYPATDIPQASRFL MKNKVRMICDCLAPPVKV
Sbjct: 61 VYKFHEDEHGEVVSECRRPDLEAYLGLHYPATDIPQASRFLFMKNKVRMICDCLAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ-GRK 356
IQD+KL Q LSLCGSTLR+PHGCHA+YM NMGSIASLVMSVT+NE +D +D DQ++ RK
Sbjct: 121 IQDEKLPQSLSLCGSTLRSPHGCHAQYMANMGSIASLVMSVTVNEDDDMVDGDQQRMARK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQ+NKEVEL+AQ REKHI++TQT+LCDML
Sbjct: 181 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQINKEVELAAQGREKHIMQTQTLLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PV IVTQ+PNVMDLVKCDGAALYYR K WLLGVTPTE QI+DIAEWLLEYH G+TG
Sbjct: 241 LRDAPVAIVTQSPNVMDLVKCDGAALYYRKKFWLLGVTPTEAQIRDIAEWLLEYHSGNTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGYPG LG+AVCG+AAVKITS+DFLFWFRSHTAKEIKWGGAKHD KD
Sbjct: 301 LSTDSLMEAGYPGTSVLGNAVCGMAAVKITSRDFLFWFRSHTAKEIKWGGAKHDPDDKDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
RKMHPRSSFKAFLEVVK RSLPWED+EMDAI
Sbjct: 361 IRKMHPRSSFKAFLEVVKWRSLPWEDMEMDAI 392
>gi|21070073|gb|AAM34195.1| phytochrome C [Glandonia macrocarpa]
Length = 392
Score = 720 bits (1858), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/392 (85%), Positives = 362/392 (92%), Gaps = 1/392 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLV EV DLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVKEVRDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVV+EC R DLE YLG HYPATDIPQASRFL MKNKVRMICDCLAPPVKV
Sbjct: 61 VYKFHEDEHGEVVSECHRSDLESYLGLHYPATDIPQASRFLFMKNKVRMICDCLAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ-GRK 356
IQD++L QPLSLCGSTLR+PHGCHA+YM NMG+IASLVMSVTINE +D +D D++Q RK
Sbjct: 121 IQDERLPQPLSLCGSTLRSPHGCHAQYMANMGAIASLVMSVTINEDDDMIDGDEQQMARK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQ+ KEVEL+AQ+REKHI R QT+LCDML
Sbjct: 181 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQITKEVELAAQVREKHIFRIQTLLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PV I+TQ+PNV+DLVKCDGAALYY+ K WLLG+TPTE QI+DIAEWLLEYH G+TG
Sbjct: 241 LRDAPVAIITQSPNVLDLVKCDGAALYYKKKFWLLGITPTEAQIRDIAEWLLEYHSGNTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGYPGA +LGDAVCG+AAV ITS+DFLFWFRSHTAKEI+WGGAKHD KD
Sbjct: 301 LSTDSLMEAGYPGASSLGDAVCGMAAVSITSRDFLFWFRSHTAKEIRWGGAKHDPDDKDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
GRKMHPRSSFKAFLEVVK RSLPWEDVEMDAI
Sbjct: 361 GRKMHPRSSFKAFLEVVKWRSLPWEDVEMDAI 392
>gi|39753847|gb|AAR30471.1| PHYC [Galearia filiformis]
Length = 391
Score = 720 bits (1858), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/391 (86%), Positives = 361/391 (92%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAG LKSYKLAAKAISRLQSLPSGNISL+CDVLV EVSDLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGQLKSYKLAAKAISRLQSLPSGNISLMCDVLVKEVSDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VY+FHEDEHGEVVAEC RPDLEPYLG HYPATDIPQASRFL MKNKVRMICDC AP VKV
Sbjct: 61 VYRFHEDEHGEVVAECCRPDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCQAPAVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKL 357
IQDK+L QPLSLCGSTLR+PHGCHA+YM NMGS+ASLVMSVTIN +DE+ +DQ++ RKL
Sbjct: 121 IQDKRLVQPLSLCGSTLRSPHGCHAQYMANMGSVASLVMSVTINGDDDEMHSDQQKRRKL 180
Query: 358 WGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLL 417
WGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQ+NKEVEL+AQ+REKHIL+ QT+LCDMLL
Sbjct: 181 WGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQINKEVELAAQMREKHILQIQTMLCDMLL 240
Query: 418 RDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGL 477
RDSP+ I+TQ+PNVMDLVKCDGAALYY+ K LLGVTPTE QIKDIA+WLLEYH GSTGL
Sbjct: 241 RDSPLAIITQSPNVMDLVKCDGAALYYKKKFQLLGVTPTEAQIKDIADWLLEYHSGSTGL 300
Query: 478 STDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGG 537
STDSL+EAGY GA LGDAVCG+AAV+ITS DFLFWFRSHTAKEIKWGGAKHD KD G
Sbjct: 301 STDSLMEAGYQGASILGDAVCGMAAVRITSNDFLFWFRSHTAKEIKWGGAKHDPNDKDDG 360
Query: 538 RKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
RKMHPRSSFKAFLEVVK RSLPWEDVEMDAI
Sbjct: 361 RKMHPRSSFKAFLEVVKWRSLPWEDVEMDAI 391
>gi|21069995|gb|AAM34156.1| phytochrome C [Triopterys rigida]
Length = 392
Score = 719 bits (1857), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/392 (85%), Positives = 364/392 (92%), Gaps = 1/392 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLV EV DLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVKEVRDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVV+E RR DLE YLG HYPATDIPQASRFL MKNKVRMICDCLAPPVKV
Sbjct: 61 VYKFHEDEHGEVVSESRRSDLESYLGLHYPATDIPQASRFLFMKNKVRMICDCLAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ-GRK 356
IQD++L QPLSLCGSTLR+PHGCHA++M NMG+IASLVMSVT+NE +D +D DQ Q RK
Sbjct: 121 IQDERLSQPLSLCGSTLRSPHGCHAQHMTNMGTIASLVMSVTVNEDDDMVDGDQPQMTRK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTSPRFVPFPLRYACEFLIQVFG+Q+NKEVEL+AQ+REKHIL+ QT+LCDML
Sbjct: 181 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGLQINKEVELAAQVREKHILQIQTMLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PV I+TQ+PNVMDLVKCDGAALY++ K WLLGVTPTEEQI+DIAEWLLEYH G+TG
Sbjct: 241 LRDAPVAIITQSPNVMDLVKCDGAALYFKNKTWLLGVTPTEEQIRDIAEWLLEYHSGNTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGYPGA A+GDAVCG+AAV ITS+DFLFWFRSHTAKEIKWGGAKHD KD
Sbjct: 301 LSTDSLMEAGYPGASAVGDAVCGMAAVSITSRDFLFWFRSHTAKEIKWGGAKHDPDDKDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
GRKMHPRSSFKAFLEVVK RS+PWEDVEMDAI
Sbjct: 361 GRKMHPRSSFKAFLEVVKWRSMPWEDVEMDAI 392
>gi|89330100|emb|CAJ80962.1| phytochrome A [Pedicularis julica]
Length = 612
Score = 719 bits (1857), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/525 (65%), Positives = 420/525 (80%), Gaps = 8/525 (1%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ L++D EPV P +VP+TAAGAL+SYKLAAKAI+RLQ+LPSG++ L
Sbjct: 1 SGKPFYAIIHRVTGSLIVDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALPSGSLERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
CD +V EV +LTGYDRVM+YKFH+D+HGEV++E +P LEPY+G HYPATDIPQA+RFL
Sbjct: 61 CDTMVQEVFELTGYDRVMIYKFHDDDHGEVLSEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDC A V+VIQD L L+LCGSTLRAPH CH +YMENM SIASLVMSV
Sbjct: 121 MKNKVRMICDCRANHVRVIQDDNLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 340 INEA-EDELDNDQ-----EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKE 393
+NE ED D+ ++ ++LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKE
Sbjct: 181 VNEGNEDGPDSSSSSSHPDKKKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKE 240
Query: 394 VELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGV 453
+EL Q EK+ILRTQT+LCDMLLRD+P+GIV+++PNVMDLVKC+GA L ++ K + LG+
Sbjct: 241 IELENQTLEKNILRTQTLLCDMLLRDAPLGIVSKSPNVMDLVKCNGAILIHKTKKYRLGM 300
Query: 454 TPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFW 513
TP++ QI+DI WL EYHR STGLSTDSL +AG+PGALALGDAVCG+AAV+IT +D+LFW
Sbjct: 301 TPSDFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITDEDWLFW 360
Query: 514 FRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQL 573
FRSHTA EI+WGGAKH+ G KD GRKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQL
Sbjct: 361 FRSHTAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQL 420
Query: 574 ILRGS--LQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASG 631
ILR + Q E + + ++ D +++ I EL +T+EMVRLIETA+VPI AV G
Sbjct: 421 ILRNASNKQAEERDTNGKEIHARLNDLQLDGIQELEAVTSEMVRLIETASVPIFAVGVDG 480
Query: 632 NVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
VNGWN+K A+LTGL VD+A+G+ V LV S + V ML A
Sbjct: 481 LVNGWNTKIADLTGLPVDKAMGSHFVALVDDSSAEAVNKMLELAL 525
>gi|89331035|emb|CAJ80884.1| phytochrome A [Bartsia crenata]
Length = 610
Score = 719 bits (1857), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/523 (65%), Positives = 412/523 (78%), Gaps = 6/523 (1%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ L++D EPV P +VP+TA GAL+SYKLA+KA SRLQSLPSG++ L
Sbjct: 1 SGKPFYAIIHRVTASLIVDFEPVKPHEVPMTATGALQSYKLASKATSRLQSLPSGSMERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
C+ +V EV +LTGYDRVM+YKFH+D+HGEV+ E +P LEPY+G HYPATDIPQA+RFL
Sbjct: 61 CETMVQEVFELTGYDRVMIYKFHDDDHGEVLTEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
M+NKVRMICDC A V+VIQD+ L L+LCGSTLRAPH CH +YMENM SIASLVMSV
Sbjct: 121 MRNKVRMICDCRANHVRVIQDQNLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 340 INEAEDELDND---QEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVEL 396
+NE +E+ D Q R+LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKE+EL
Sbjct: 181 VNEGNEEVGPDELSQHLKRRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKELEL 240
Query: 397 SAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPT 456
Q+ EK+ILRTQT++CDMLLRD+P+GIV+Q+PNVMDLVKCDGA L ++ + LGVTP+
Sbjct: 241 ENQMLEKNILRTQTLMCDMLLRDAPLGIVSQSPNVMDLVKCDGAILLHKDQKHRLGVTPS 300
Query: 457 EEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRS 516
+ QI+DI WL EYHR STGLSTDSL +AGYPGA ALGD VCG+AAV+IT +D+LFWFRS
Sbjct: 301 DFQIRDIVSWLDEYHRDSTGLSTDSLYDAGYPGAHALGDIVCGMAAVRITDRDWLFWFRS 360
Query: 517 HTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILR 576
HTA EI+WGGAKH+ G +DGG+KMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR
Sbjct: 361 HTASEIRWGGAKHELGERDGGQKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILR 420
Query: 577 GSLQDEVAEDSKM---IVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNV 633
+ E+ E + + + I+ + EL +T+EMVRLIETA+VPI AV G V
Sbjct: 421 NASSKEMEERKDLEGVEIQARLNELHIDGVQELEAVTSEMVRLIETASVPIFAVGVDGLV 480
Query: 634 NGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
NGWN+K A+LT L VD+AIG + LV S + V ML A
Sbjct: 481 NGWNTKIADLTELPVDKAIGVHFLSLVEESSAEAVSKMLELAL 523
>gi|89331043|emb|CAJ80888.1| phytochrome A [Boschniakia hookeri]
Length = 615
Score = 719 bits (1857), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/521 (66%), Positives = 414/521 (79%), Gaps = 4/521 (0%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ L+ID EPV P +VP+TAAGAL+SYKLAAKAI+RLQ+LP G++ L
Sbjct: 1 SGKPFYAIIHRVTGSLIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALPGGSMERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
CD +V EV +LTGYDRVM+YKFH+D+HGEV E +P LEPY+G HYPATDIPQA+RFL
Sbjct: 61 CDTMVQEVFELTGYDRVMIYKFHDDDHGEVSTEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDC A VKV+QD+ L L+LCGSTLRAPH CH +YMENM SIASLVMSV
Sbjct: 121 MKNKVRMICDCRANHVKVVQDENLSFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 340 INEA-EDELDNDQ--EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVEL 396
+NE ED D+ ++ + LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKE EL
Sbjct: 181 VNEGNEDGPDSSSVPDKRKTLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIYVNKEFEL 240
Query: 397 SAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPT 456
Q+ EK+ILRTQT+LCD+LLRD+P+GIV+Q+PNVMDLVKCDGA L Y+ + LG+TP+
Sbjct: 241 ENQMLEKNILRTQTLLCDLLLRDAPLGIVSQSPNVMDLVKCDGAVLLYKNTKYRLGLTPS 300
Query: 457 EEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRS 516
+ QI+DI WL EYHR STGLSTDSL +AG+PGAL+L DAVCG+ AV+IT +D+LFWFRS
Sbjct: 301 DFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALSLCDAVCGMVAVRITERDWLFWFRS 360
Query: 517 HTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILR 576
HTA EI+WGGAKH+ G D GRKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR
Sbjct: 361 HTAAEIQWGGAKHEPGETDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILR 420
Query: 577 GSLQDEVAEDSK-MIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNG 635
+ ++ DS+ ++ D +I+ + E+ +T+EMVRLIETA+VPI AVD G VNG
Sbjct: 421 NAFKESEGRDSESREIHARLHDLQIDGVREIEAVTSEMVRLIETASVPIFAVDVDGLVNG 480
Query: 636 WNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
WN+K A+LTGL VD+AIG + LV S D V ML A
Sbjct: 481 WNTKIADLTGLCVDKAIGWHFLALVEDSSADTVSKMLELAL 521
>gi|406685341|gb|AFS51111.1| phytochrome P, partial [Cryptomeria japonica]
Length = 529
Score = 719 bits (1857), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/482 (71%), Positives = 404/482 (83%), Gaps = 4/482 (0%)
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S +LA +A SRLQ++P+G+I LLCD +V EV +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 21 SQRLAVRATSRLQAVPNGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 80
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VR+ICDC A PV VIQ ++L QPL L GSTLRA
Sbjct: 81 DLEPYLGLHYPATDIPQASRFLFMQNRVRVICDCRANPVGVIQVEELKQPLCLVGSTLRA 140
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-KLWGLVVCHHTSPRFVPFPL 375
PHGCHA+YM NMGSIASLVM+V +N + D + GR KLWGLVVCHHTSPR VPFPL
Sbjct: 141 PHGCHAQYMANMGSIASLVMAVIVNGNGN--DEEGSSGRVKLWGLVVCHHTSPRAVPFPL 198
Query: 376 RYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLV 435
R ACEFL+Q FG+Q+N E++L+AQL E +ILRTQT+LCDMLLRD+P+GIVTQ+P++MDLV
Sbjct: 199 RSACEFLMQTFGLQINMEMQLAAQLTENNILRTQTLLCDMLLRDAPIGIVTQSPSIMDLV 258
Query: 436 KCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGD 495
KCDGAALYY GK WLLGVTPT QIKDIA+WLLEYH STGLSTDSL +AGYPGA +LGD
Sbjct: 259 KCDGAALYYGGKFWLLGVTPTGAQIKDIADWLLEYHGDSTGLSTDSLADAGYPGAASLGD 318
Query: 496 AVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQ 555
AVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+
Sbjct: 319 AVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKR 378
Query: 556 RSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVR 615
RSLPWE+VEMDAIHSLQLILRGS QD ++K +V+V D +++ IDEL + NEMVR
Sbjct: 379 RSLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMVHVQLHDLKLQGIDELSSVANEMVR 438
Query: 616 LIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSS 674
LIETA PILAVD++G VNGWN+KAAELTGL V +A+G +LV DLV +S++ V+ ML
Sbjct: 439 LIETATAPILAVDSAGIVNGWNAKAAELTGLPVGEAMGKSLVHDLVFEESMETVEKMLYH 498
Query: 675 AF 676
A
Sbjct: 499 AL 500
>gi|21069975|gb|AAM34146.1| phytochrome C [Lophanthera lactescens]
Length = 392
Score = 719 bits (1856), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/392 (86%), Positives = 362/392 (92%), Gaps = 1/392 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAA+AISRLQSLPSGNISL DVLV EV DLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAARAISRLQSLPSGNISLPSDVLVKEVRDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVV+EC RPDLE YLG HYPATDIPQASRFL MKNKVRMICDCLAPPVKV
Sbjct: 61 VYKFHEDEHGEVVSECCRPDLEAYLGLHYPATDIPQASRFLFMKNKVRMICDCLAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ-GRK 356
IQD++L QPLSLCGSTLR+PHGCHA+YM NMGSIASLVMSVT+NE +D +D DQ+Q RK
Sbjct: 121 IQDERLPQPLSLCGSTLRSPHGCHAQYMANMGSIASLVMSVTVNEDDDMVDGDQQQMARK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQ+NK+VEL+AQ+REKHILRTQT+LCDML
Sbjct: 181 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQINKKVELAAQVREKHILRTQTLLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PV IV Q+PNVMDLVKCDGAALYYR K WLLGVTPTE QI+DIAEWLLEYH G+TG
Sbjct: 241 LRDAPVAIVIQSPNVMDLVKCDGAALYYRKKFWLLGVTPTEAQIRDIAEWLLEYHSGNTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGYPG LG+AVCG+AAVKITS+DFLFWFRSHTAKEIKWGGAKHD G KD
Sbjct: 301 LSTDSLMEAGYPGTSVLGNAVCGMAAVKITSRDFLFWFRSHTAKEIKWGGAKHDPGDKDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
RKMHPRSSFKAFLEVVK RSLPWED+EMDAI
Sbjct: 361 IRKMHPRSSFKAFLEVVKWRSLPWEDIEMDAI 392
>gi|406685407|gb|AFS51144.1| phytochrome P, partial [Sequoia sempervirens]
Length = 531
Score = 719 bits (1856), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/485 (70%), Positives = 400/485 (82%), Gaps = 2/485 (0%)
Query: 194 ALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAEC 253
A+ S +LA +A SRLQ++P+G+I LLCD +V EV +LTGYDRVMVYKFHEDEHGEVVAE
Sbjct: 18 AMPSQRLAVRATSRLQAVPNGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDEHGEVVAEI 77
Query: 254 RRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGST 313
RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ ++L QPL L GST
Sbjct: 78 RRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRASPVRVIQAEELKQPLCLVGST 137
Query: 314 LRAPHGCHARYMENMGSIASLVMSVTIN-EAEDELDNDQEQGRKLWGLVVCHHTSPRFVP 372
LRAPHGCH++YM NMGSIASLVM+V +N DE KLWGLVVCHHTSPR V
Sbjct: 138 LRAPHGCHSQYMANMGSIASLVMAVIVNGNGNDEEGASGRSSVKLWGLVVCHHTSPRAVS 197
Query: 373 FPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVM 432
FPLR ACEFL+Q FG+Q+N E++L+AQL E +ILRTQT+LCDMLLRD+P+GIVTQ+P++M
Sbjct: 198 FPLRSACEFLMQTFGLQINMEMQLAAQLTENNILRTQTLLCDMLLRDAPIGIVTQSPSIM 257
Query: 433 DLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALA 492
DLVKCDGAALYY GK WLLGVTPTE QIKDIA+WLLEYH STGLSTDSL +AGYPGA +
Sbjct: 258 DLVKCDGAALYYGGKFWLLGVTPTEAQIKDIADWLLEYHGDSTGLSTDSLADAGYPGAAS 317
Query: 493 LGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEV 552
LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEV
Sbjct: 318 LGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPRSSFKAFLEV 377
Query: 553 VKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNE 612
VK+RSLPWE+VEMDAIHSLQLILRGS QD +K +V+ D +++ IDEL + +E
Sbjct: 378 VKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSHTKTMVHARLNDLKLQGIDELSSVASE 437
Query: 613 MVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNM 671
MVRLIETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ M
Sbjct: 438 MVRLIETATAPILAVDSGGIVNGWNAKVAELTGLPVSEAMGKSLVHDLVFEESMETVEKM 497
Query: 672 LSSAF 676
L A
Sbjct: 498 LYHAL 502
>gi|89330154|emb|CAJ80989.1| phytochrome A [Triphysaria pusilla]
Length = 609
Score = 719 bits (1856), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/523 (65%), Positives = 416/523 (79%), Gaps = 7/523 (1%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ ++ID EPV P +VP+TAAGAL+SYKLAAKAI+RLQ+LPSG++ L
Sbjct: 1 SGKPFYAIIHRVTGSMIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALPSGSMERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
CD +V EV +LTGYDRVM+YKFH+D+HGEV++E +P L+ Y G HYPATDIPQA+RFL
Sbjct: 61 CDTMVQEVFELTGYDRVMIYKFHDDDHGEVLSEITKPGLDSYAGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
+KNKVRMICDC A VKVIQD L L+LCGSTLRAPH CH +YMENM SIASLVMSV
Sbjct: 121 IKNKVRMICDCRANHVKVIQDDNLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 340 INEAEDELDNDQ---EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVEL 396
+NE +++ N ++ ++LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKE+EL
Sbjct: 181 VNEGDEDGPNSSSHPDKKKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEIEL 240
Query: 397 SAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPT 456
Q+ EK+ILRTQT+LCDMLLRD+P+GIV+Q+PNVMDLVKCDGA L ++ K + LG+TP+
Sbjct: 241 ENQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAVLIHKTKKYRLGMTPS 300
Query: 457 EEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRS 516
+ QI+DI WL EYHR STGLSTDSL +AG+PGALALGDAVCG+AAV+IT D+LFWFRS
Sbjct: 301 DFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITDTDWLFWFRS 360
Query: 517 HTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILR 576
HTA EI+WGGAKH+ KD GRKMHPRSSFKAFL+VVK RSLPW+D EMDAIHSLQLILR
Sbjct: 361 HTASEIRWGGAKHEPDDKDDGRKMHPRSSFKAFLDVVKTRSLPWKDFEMDAIHSLQLILR 420
Query: 577 GSLQDEVAE---DSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNV 633
S E + D K I + D +++ EL +T+EMVRLIETA+VPI AVD G V
Sbjct: 421 NSSNKEAEKRDVDGKEI-HARLNDLQLDGKRELEAVTSEMVRLIETASVPIFAVDVDGLV 479
Query: 634 NGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
NGWN+K A+LTGL VD+AIG + LV + V ML SA
Sbjct: 480 NGWNTKIADLTGLPVDKAIGKHFLALVEDSFAEAVNKMLGSAL 522
>gi|21069961|gb|AAM34139.1| phytochrome C [Peixotoa glabra]
Length = 392
Score = 719 bits (1856), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/392 (85%), Positives = 363/392 (92%), Gaps = 1/392 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLV EV DLTGYDRVM
Sbjct: 1 DLEPVNPSDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVKEVRDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVV+ECRR DLE YLG HYPATDIPQASRFL MKNKVRMICDCLAPPV+V
Sbjct: 61 VYKFHEDEHGEVVSECRRSDLESYLGLHYPATDIPQASRFLFMKNKVRMICDCLAPPVQV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ-GRK 356
IQD++L QPLSLCGSTLR+PHGCHA+YM NMG+IASLV SVT+NE +D +D DQ+Q RK
Sbjct: 121 IQDERLPQPLSLCGSTLRSPHGCHAQYMTNMGTIASLVKSVTVNEDDDTMDGDQQQMTRK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQ+NKEVEL+AQ+REKHIL+ QT+LCDML
Sbjct: 181 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQINKEVELAAQVREKHILQIQTMLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PV I+TQ+PNVMDLVKCDGAALY++ K WLLGVTPTEEQI+DIAEWLL+YH G+TG
Sbjct: 241 LRDAPVAIITQSPNVMDLVKCDGAALYFKNKTWLLGVTPTEEQIRDIAEWLLKYHSGNTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGYPGA LGDAVCG+AAV ITS+DFLFWFRSHTAKEIKWGGAKHD KD
Sbjct: 301 LSTDSLMEAGYPGASTLGDAVCGMAAVSITSRDFLFWFRSHTAKEIKWGGAKHDPDDKDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
RKMHPRSSFKAFLEVVK RS+PWEDVEMDAI
Sbjct: 361 LRKMHPRSSFKAFLEVVKWRSMPWEDVEMDAI 392
>gi|6715255|gb|AAF26355.1|AF190109_1 phytochrome C, partial [Trochodendron aralioides]
Length = 390
Score = 719 bits (1856), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/391 (87%), Positives = 363/391 (92%), Gaps = 1/391 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSY LAAKAISRLQSLPSGN+SLLCDVLV EVS+LTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYTLAAKAISRLQSLPSGNLSLLCDVLVREVSELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHE +HGEVVAECR DLEPYLG HYPATDIPQASRFL MKNK+R ICDCLAPPVKV
Sbjct: 61 VYKFHEHKHGEVVAECRISDLEPYLGLHYPATDIPQASRFLFMKNKIRTICDCLAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKL 357
IQDK+L QPLSLCGSTLRAPHGCHA+YMENMGSIASLVMSV +E EDE+++D+ +GRKL
Sbjct: 121 IQDKRLVQPLSLCGSTLRAPHGCHAQYMENMGSIASLVMSVMNHEDEDEIESDR-KGRKL 179
Query: 358 WGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLL 417
WGLVVCHHTSPRFVPF LRYACEFLIQVFG+Q+NKEVEL+AQLREKHILRTQTVLCDMLL
Sbjct: 180 WGLVVCHHTSPRFVPFLLRYACEFLIQVFGIQLNKEVELAAQLREKHILRTQTVLCDMLL 239
Query: 418 RDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGL 477
RD+PVGIVTQ+PNVMDLVKCDGAALYYR +WLLGVTPTE QI+DIA WLLEYH GSTGL
Sbjct: 240 RDAPVGIVTQSPNVMDLVKCDGAALYYRNTIWLLGVTPTEAQIRDIAGWLLEYHNGSTGL 299
Query: 478 STDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGG 537
STDSL+EAGY AL LGDAVCG+AAVKITSKDFLFWFRSHTAKEIKWGG KHD KD G
Sbjct: 300 STDSLMEAGYSDALLLGDAVCGMAAVKITSKDFLFWFRSHTAKEIKWGGVKHDPVDKDDG 359
Query: 538 RKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
RKMHPRSSFKAFLEVVK+RSLPWEDVEMDAI
Sbjct: 360 RKMHPRSSFKAFLEVVKRRSLPWEDVEMDAI 390
>gi|89330118|emb|CAJ80971.1| phytochrome A [Rhinanthus glacialis]
Length = 614
Score = 719 bits (1855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/525 (64%), Positives = 413/525 (78%), Gaps = 8/525 (1%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ L+ID EPV P +VP+TAAGAL+SYKLA+KAI+RLQ+L G+I L
Sbjct: 1 SGKPFYAIIHRVTASLIIDFEPVKPHEVPMTAAGALQSYKLASKAIARLQALSGGSIERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
C+ +V EV +LTGYDRVM YKFHED+HGEV+ E +P LEPY+G HYPATDIPQA+RFL
Sbjct: 61 CETMVQEVFELTGYDRVMTYKFHEDDHGEVLTEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDC A V+VIQD+ L L+LCGSTLRAPH CH +YMENM SIASLVMSV
Sbjct: 121 MKNKVRMICDCRANHVRVIQDENLPMDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 340 INEAEDELDNDQ-----EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEV 394
+NE +E D+ ++ ++LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKE
Sbjct: 181 VNEGNEEAAPDETPQQLDKRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKET 240
Query: 395 ELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVT 454
E+ Q+ EK+ILRTQT+LCDMLLRD+P+GIV+Q+PNVMDLVKCDG+ L ++ + + LG+T
Sbjct: 241 EMENQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGSILLHKNQKYRLGIT 300
Query: 455 PTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWF 514
P++ QI+DI WL EYHR STGLSTDSL +AG+PGALALGD VCG+AAV+IT +D+LFWF
Sbjct: 301 PSDFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDVVCGMAAVRITDRDWLFWF 360
Query: 515 RSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLI 574
RSHTA EI+WGGAKH+ G +D GRKMHPRSSFKAFLEVVK RSLPW+D EMDA HSLQLI
Sbjct: 361 RSHTASEIRWGGAKHELGERDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDATHSLQLI 420
Query: 575 LRGSLQDEVAEDSKM---IVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASG 631
LR + E+ E + + + +I+ + EL +T+EMVRLIETA+VPI AV G
Sbjct: 421 LRNASSKEMEERKDLEGVEIQARLNELQIDGVQELEAVTSEMVRLIETASVPIFAVGVDG 480
Query: 632 NVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
VNGWN+K A+LTGL VD+AIG + LV S + V ML A
Sbjct: 481 LVNGWNTKIADLTGLPVDKAIGLHFLSLVEESSAEAVSKMLELAL 525
>gi|89330104|emb|CAJ80964.1| phytochrome A [Pedicularis kerneri]
Length = 612
Score = 719 bits (1855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/525 (65%), Positives = 419/525 (79%), Gaps = 8/525 (1%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ L++D EPV P +VP+TAAGAL+SYKLAAKAI+RLQ+LPSG++ L
Sbjct: 1 SGKPFYAIIHRVTGSLIVDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALPSGSLERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
CD +V EV +LTGYDRVM+YKFH+D+HGEV++E +P LEPY+G HYPATDIPQA+RFL
Sbjct: 61 CDTMVQEVFELTGYDRVMIYKFHDDDHGEVLSEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDC A V+VIQD L L+LCGSTLRAPH CH +YMENM SIASLVMSV
Sbjct: 121 MKNKVRMICDCRANHVRVIQDDNLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 340 INEA-EDELDNDQ-----EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKE 393
+NE ED D+ ++ ++LWGLVVCH+TSPRF+PFPLRYACEFL QVF + VNKE
Sbjct: 181 VNEGNEDGPDSSSSSSHPDKKKRLWGLVVCHNTSPRFIPFPLRYACEFLAQVFAIHVNKE 240
Query: 394 VELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGV 453
+EL Q EK+ILRTQT+LCDMLLRD+P+GIV+++PNVMDLVKC+GA L ++ K + LG+
Sbjct: 241 IELENQTLEKNILRTQTLLCDMLLRDAPLGIVSKSPNVMDLVKCNGAILIHKTKKYRLGM 300
Query: 454 TPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFW 513
TP++ QI+DI WL EYHR STGLSTDSL +AG+PGALALGDAVCG+AAV+IT +D+LFW
Sbjct: 301 TPSDFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITDEDWLFW 360
Query: 514 FRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQL 573
FRSHTA EI+WGGAKH+ G KD GRKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQL
Sbjct: 361 FRSHTAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQL 420
Query: 574 ILRGSLQDEVAE--DSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASG 631
ILR + E E + ++ D +++ I EL +T+EMVRLIETA+VPI AV G
Sbjct: 421 ILRIASNKEAEERDTNGKEIHARLNDLQLDGIQELEAVTSEMVRLIETASVPIFAVGVDG 480
Query: 632 NVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
VNGWN+K A+LTGL VD+A+G+ V LV S + V ML A
Sbjct: 481 LVNGWNTKIADLTGLPVDKAMGSHFVALVDDSSAEAVNKMLELAL 525
>gi|91064674|emb|CAJ87070.1| phytochrome A [Alonsoa sp. Wood 18362]
Length = 606
Score = 719 bits (1855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/520 (66%), Positives = 412/520 (79%), Gaps = 3/520 (0%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ L+ID EPV + P+TAAGAL+SYKLA KAI+RLQ+LPSG++ L
Sbjct: 1 SGKPFYAIIHRVTGSLIIDFEPVRSHESPMTAAGALQSYKLAGKAINRLQALPSGSMERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
CD +V EV +LTGYDRVM YKFH+D+HGEV E +P LEPY G HYPATDIPQA+RFL
Sbjct: 61 CDTMVQEVFELTGYDRVMTYKFHDDDHGEVFTEVTKPGLEPYAGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDC A VKVIQD+KL L+LCGSTLRA H CH +YMENM S+ASLVMSV
Sbjct: 121 MKNKVRMICDCRANHVKVIQDEKLPFNLTLCGSTLRAAHSCHLQYMENMNSVASLVMSVV 180
Query: 340 INEAEDE-LDNDQEQGRK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELS 397
INE +E D Q Q RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF VNKE+EL
Sbjct: 181 INEGGEEGPDPSQPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLTQVFATHVNKELELE 240
Query: 398 AQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTE 457
Q+ EK+IL TQT+LCDMLLRD+P+G+V+Q+P+VM+LVKCDGAAL Y+ K + LG+TPT+
Sbjct: 241 NQILEKNILWTQTLLCDMLLRDAPLGVVSQSPSVMNLVKCDGAALLYKNKKYRLGLTPTD 300
Query: 458 EQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSH 517
QI+DI WL EYHR STG STDSL +AG+PGALALGDAVCG+A V+IT KD+LFWFRSH
Sbjct: 301 YQIRDIISWLDEYHRDSTGFSTDSLYDAGFPGALALGDAVCGMAGVQITDKDWLFWFRSH 360
Query: 518 TAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRG 577
TA EI+WGGAKH+ GKD GRKMHPRSSF AFLEVVK RSLPW+D EMDA+HS+QLILR
Sbjct: 361 TAAEIRWGGAKHEQDGKDDGRKMHPRSSFNAFLEVVKTRSLPWKDYEMDAMHSMQLILRN 420
Query: 578 SLQDEVAEDSKMIVNVPSVDD-RIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGW 636
+ + A++S+ ++D R++ + E+ +T+EMVRLIETA VPILAVD G VNGW
Sbjct: 421 AFIEAKAKESETEAVRARLNDLRVDGVQEIEAVTSEMVRLIETATVPILAVDVDGVVNGW 480
Query: 637 NSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
N+K A+LT L +D+AIG + LV S D V+ ML A
Sbjct: 481 NTKIADLTCLPIDEAIGQHFLTLVEDSSADTVRKMLELAL 520
>gi|39753865|gb|AAR30480.1| PHYC [Gymnosporia arbutifolia]
Length = 391
Score = 719 bits (1855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/391 (84%), Positives = 364/391 (93%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVP+TAAGALKSYKLAAKAISRLQSLPSGN+SLLCDVLV EVS+LTGYDRVM
Sbjct: 1 DLEPVNPADVPITAAGALKSYKLAAKAISRLQSLPSGNMSLLCDVLVKEVSELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VY+FH+D+HGEVV EC RPDLEPYLG HYPATDIPQASRFL MKNKVRMICDCLAPPVKV
Sbjct: 61 VYRFHDDDHGEVVGECCRPDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCLAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKL 357
+QDK+L QPLSL GSTLR+PHGCHA+YM NMGSIASLVMSVTINE +DE +DQ++GRKL
Sbjct: 121 LQDKRLAQPLSLGGSTLRSPHGCHAQYMSNMGSIASLVMSVTINEDDDETTSDQQKGRKL 180
Query: 358 WGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLL 417
WGLVVCHH++PRFVPFPLRYACEFLIQVFGVQ+NKEVEL+ QL+EKHILRTQTVLCDMLL
Sbjct: 181 WGLVVCHHSTPRFVPFPLRYACEFLIQVFGVQINKEVELATQLKEKHILRTQTVLCDMLL 240
Query: 418 RDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGL 477
RD+PVGI+TQ+PNVMDLVKCDGAALYYR K WLLGVTPTE QI DIAEWLLEYH STGL
Sbjct: 241 RDAPVGILTQSPNVMDLVKCDGAALYYRNKFWLLGVTPTETQITDIAEWLLEYHSESTGL 300
Query: 478 STDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGG 537
STDSL+EAGYP A LG+AVCG+AA+KITSKDFLFWFRSHTAKE+KWGGAKH+ KD G
Sbjct: 301 STDSLMEAGYPDASILGEAVCGMAAIKITSKDFLFWFRSHTAKEMKWGGAKHNPDDKDDG 360
Query: 538 RKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
++MHPRSSFKAFL VVK+RSLPWED+EMDAI
Sbjct: 361 KRMHPRSSFKAFLVVVKRRSLPWEDIEMDAI 391
>gi|21070033|gb|AAM34175.1| phytochrome C [Dicella nucifera]
Length = 392
Score = 719 bits (1855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/392 (84%), Positives = 363/392 (92%), Gaps = 1/392 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSY LA+KAISRLQSLPSGNISLLCDVLV EV DLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYNLASKAISRLQSLPSGNISLLCDVLVKEVRDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHG+VV+ECRR DLE YLG HYPATDIPQASRFL MKNKVRMICDCLAPPVKV
Sbjct: 61 VYKFHEDEHGDVVSECRRSDLESYLGLHYPATDIPQASRFLFMKNKVRMICDCLAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ-GRK 356
IQD++L QPLSLCGSTLR+PHGCHA+YM NMG+IASLVMSVTINE ++ +D DQ+Q RK
Sbjct: 121 IQDERLPQPLSLCGSTLRSPHGCHAQYMTNMGTIASLVMSVTINEEDETMDGDQQQMTRK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQ+NKEVEL+AQ+RE HIL+ QT+LCDML
Sbjct: 181 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQINKEVELAAQVRENHILQIQTMLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PV I+TQ+PNVMDLVKCDGAALY++ K WLLGVTPTE+QI+DIAEWLLEYH G+TG
Sbjct: 241 LRDAPVAIITQSPNVMDLVKCDGAALYFKNKTWLLGVTPTEKQIRDIAEWLLEYHSGNTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGYPGA LGDAVCG+AAV ITS+DFLFWFRSHTAKEIKWGGAKHD KD
Sbjct: 301 LSTDSLMEAGYPGASVLGDAVCGMAAVSITSRDFLFWFRSHTAKEIKWGGAKHDPDDKDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
GRKMHPRSSFKAFLEVVK RS+PWED+EMDAI
Sbjct: 361 GRKMHPRSSFKAFLEVVKWRSIPWEDIEMDAI 392
>gi|21070069|gb|AAM34193.1| phytochrome C [Mcvaughia bahiana]
Length = 392
Score = 718 bits (1854), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/392 (85%), Positives = 358/392 (91%), Gaps = 1/392 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALK YKLAAKAISRLQSLPSGNISLLCDVLV EV DLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKPYKLAAKAISRLQSLPSGNISLLCDVLVKEVRDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVV ECRR DLE YL HYPATDIPQASRFL MKNKVRMICDCLAPPVKV
Sbjct: 61 VYKFHEDEHGEVVTECRRSDLESYLDLHYPATDIPQASRFLFMKNKVRMICDCLAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ-GRK 356
IQDK+L QPLSLCGSTLR+PHGCHA+YM NMG++ASLVMSVTINE +D +D DQ+Q RK
Sbjct: 121 IQDKRLSQPLSLCGSTLRSPHGCHAQYMANMGAVASLVMSVTINEDDDTVDGDQQQMARK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQ+ KEVEL+AQ+REKHILR QT+LCDML
Sbjct: 181 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQITKEVELAAQVREKHILRIQTLLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PV I+TQ+PNVMDLVKCDGAALYYR K WLLGVTPTE QI+DIAEWLLEYH G+TG
Sbjct: 241 LRDAPVAIITQSPNVMDLVKCDGAALYYRKKFWLLGVTPTEAQIRDIAEWLLEYHSGNTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+E GYPGA ALG+ VCG+AAV ITS+DFLFWFRSHTAKEIKWGGAKHD KD
Sbjct: 301 LSTDSLLEVGYPGASALGEVVCGMAAVSITSRDFLFWFRSHTAKEIKWGGAKHDPDDKDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
RKMHPRSSFKAFLEVV+ RSLPWEDVEMDAI
Sbjct: 361 SRKMHPRSSFKAFLEVVEWRSLPWEDVEMDAI 392
>gi|40647467|gb|AAR88447.1| phytochrome C [Acridocarpus smeathmannii]
Length = 392
Score = 718 bits (1854), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/392 (85%), Positives = 360/392 (91%), Gaps = 1/392 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLV EV DLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVKEVRDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVV+ECRR DLE YLG HYPATDIPQASRFL MKNKVRMICDCLAPP+KV
Sbjct: 61 VYKFHEDEHGEVVSECRRSDLEAYLGLHYPATDIPQASRFLFMKNKVRMICDCLAPPIKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ-GRK 356
IQDK+L QPLSLCGSTLR+PHGCHA+YM NMG+IASLVMSVTINE + +D DQ+Q RK
Sbjct: 121 IQDKRLPQPLSLCGSTLRSPHGCHAQYMANMGTIASLVMSVTINEDDVMMDGDQQQMARK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQ+NKEVEL+AQ+REKHIL+ QT+LCDML
Sbjct: 181 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQINKEVELAAQVREKHILQIQTLLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PV I+TQ+PNVMDLVKCDGAALYY+ K WLLG+TPTE QI+DI EWLLEYH G+TG
Sbjct: 241 LRDAPVAIITQSPNVMDLVKCDGAALYYKKKFWLLGITPTEAQIRDIVEWLLEYHSGNTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+ AGYPGA LGDAVCG+AAV ITSKDFLFWFRSHTAKEIKWGGAKH+ KD
Sbjct: 301 LSTDSLMGAGYPGASVLGDAVCGMAAVSITSKDFLFWFRSHTAKEIKWGGAKHNPDDKDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
GRKMHPRSSF AFLEVVK RSLPWEDVEMDAI
Sbjct: 361 GRKMHPRSSFNAFLEVVKWRSLPWEDVEMDAI 392
>gi|20530195|gb|AAM27029.1| phytochrome C [Malpighia stevensii]
gi|20530197|gb|AAM27030.1| phytochrome C [Malpighia emarginata]
Length = 392
Score = 718 bits (1854), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/392 (85%), Positives = 361/392 (92%), Gaps = 1/392 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLV EV DLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVKEVRDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVV+ECRR DLE YLG HYPATDIPQASRFL MKNKVRMICDC+APPVKV
Sbjct: 61 VYKFHEDEHGEVVSECRRSDLESYLGLHYPATDIPQASRFLFMKNKVRMICDCVAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ-GRK 356
IQD +L QPLSLCGSTLR+PHGCHA+YM NMG IASLVMSVT+NE +D +D DQ Q RK
Sbjct: 121 IQDDRLPQPLSLCGSTLRSPHGCHAQYMTNMGIIASLVMSVTVNEDDDMVDGDQPQMARK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS RFVPFPLRYACEFLIQVFGVQ+NKEVEL+AQ+REKHIL+ QT+LCDML
Sbjct: 181 LWGLVVCHHTSTRFVPFPLRYACEFLIQVFGVQINKEVELAAQVREKHILQIQTMLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PV I+TQ+PNVMDLVKCDGAALY++ K WLLGVTPTEEQI+DIAEWLLEYH G+TG
Sbjct: 241 LRDAPVAIITQSPNVMDLVKCDGAALYFKNKTWLLGVTPTEEQIRDIAEWLLEYHSGNTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGYPGA ALGD VCG+AAV ITS+DFLFWFRSHTAKEIKWGGAKHD KD
Sbjct: 301 LSTDSLMEAGYPGASALGDVVCGMAAVSITSRDFLFWFRSHTAKEIKWGGAKHDPDDKDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
GRKMHPRSSFKAFLEVVK RS+PWEDVEMDAI
Sbjct: 361 GRKMHPRSSFKAFLEVVKWRSMPWEDVEMDAI 392
>gi|406685345|gb|AFS51113.1| phytochrome P, partial [Cunninghamia lanceolata]
Length = 531
Score = 718 bits (1854), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/484 (70%), Positives = 398/484 (82%), Gaps = 2/484 (0%)
Query: 195 LKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECR 254
+ S +LA +A SRLQ++P+G+I LLCD +V EV +LTGYDRVMVYK HEDEHGEVVAE R
Sbjct: 19 MPSQRLAVRATSRLQAVPNGDIGLLCDTVVEEVRELTGYDRVMVYKLHEDEHGEVVAEIR 78
Query: 255 RPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTL 314
R DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV VIQ +L QPL L GSTL
Sbjct: 79 RSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVSVIQSVELKQPLCLVGSTL 138
Query: 315 RAPHGCHARYMENMGSIASLVMSVTIN-EAEDELDNDQEQGRKLWGLVVCHHTSPRFVPF 373
RAPHGCHA+YM NMGSIASLVM+V +N DE KLWGLVVCHHTSPR VPF
Sbjct: 139 RAPHGCHAQYMANMGSIASLVMAVIVNGNGNDEEGGSGRSSVKLWGLVVCHHTSPRAVPF 198
Query: 374 PLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMD 433
PLR ACEFL+Q FG+Q+N E++L+AQL E +ILRTQT+LCDMLLRD+P+GIVTQ+P++MD
Sbjct: 199 PLRSACEFLMQTFGLQINMELQLAAQLTENNILRTQTLLCDMLLRDAPIGIVTQSPSIMD 258
Query: 434 LVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALAL 493
LVKCDGAALYY G+ WLLGVTPTE QIKDIA+WLLEYH STGLSTDSL +AGYPGA +L
Sbjct: 259 LVKCDGAALYYGGRFWLLGVTPTEAQIKDIADWLLEYHVDSTGLSTDSLADAGYPGAASL 318
Query: 494 GDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVV 553
GDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD R+MHPRSSFKAFLEVV
Sbjct: 319 GDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDARRMHPRSSFKAFLEVV 378
Query: 554 KQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEM 613
K+RSLPWE+VEMDAIHSLQLILRGS QD D+K +V+ D +++ IDEL + +EM
Sbjct: 379 KRRSLPWENVEMDAIHSLQLILRGSFQDIDDSDTKTMVHSRLNDLKLQGIDELSSVASEM 438
Query: 614 VRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNML 672
VRLIETA PILAVD+SG VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ ML
Sbjct: 439 VRLIETATAPILAVDSSGTVNGWNAKVAELTGLPVGEAMGKSLVHDLVFEESMETVEKML 498
Query: 673 SSAF 676
A
Sbjct: 499 YHAL 502
>gi|224576416|gb|ACN56901.1| phytochrome A [Malcolmia africana]
Length = 577
Score = 718 bits (1854), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/505 (68%), Positives = 410/505 (81%), Gaps = 6/505 (1%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFHED+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD----NDQEQ 353
QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D Q Q
Sbjct: 121 FQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAQPQ 180
Query: 354 GRK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
RK LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+L
Sbjct: 181 KRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDML+RD+P+GIVTQ+PNVMDLVKCDGAAL Y+ K+W LG+TP++ Q+++IA WL EYH
Sbjct: 241 CDMLMRDAPLGIVTQSPNVMDLVKCDGAALLYKDKVWKLGITPSDYQLQEIASWLCEYHT 300
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AGYP AL+LGD+VCG+AAVKI++KD +FWFRSHTA E++WGGAKHD
Sbjct: 301 DSTGLSTDSLHDAGYPRALSLGDSVCGMAAVKISTKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIV 591
KD R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E + S I+
Sbjct: 361 DKDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGEPTDVSTKII 420
Query: 592 NVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
+ D +I+ + EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+A
Sbjct: 421 HSKLNDLKIDGMQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 652 IGTALVDLVAGDSVDVVKNMLSSAF 676
IG L+ LV SV++VK ML +A
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLENAL 505
>gi|315377400|gb|ADU05537.1| phytochrome A [Koeberlinia spinosa]
Length = 598
Score = 718 bits (1853), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/504 (68%), Positives = 408/504 (80%), Gaps = 5/504 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TA GAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTATGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A VKV
Sbjct: 61 TYKFHDDDHGEVVSEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCHAKHVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD---NDQEQG 354
+QD+KL L+LCGSTLRAPH CH +YMENM SIASLVM+V +NE ++E D + Q Q
Sbjct: 121 LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMSSIASLVMAVVVNEGDEESDAPNSAQAQK 180
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKE+EL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELDNQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GI++Q+PN+MDLVKCDGAAL Y+ K+W LG+TPT+ Q+ DIA WL +YHR
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKNKIWRLGITPTDSQLHDIAAWLSDYHRD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P AL LGDAVCG+AAV++TSKD +FWFRSHTA EIKWGGAKH+ G
Sbjct: 301 STGLSTDSLYDAGFPQALTLGDAVCGMAAVRVTSKDMIFWFRSHTAGEIKWGGAKHEPGE 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
KD RK HPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E + + ++
Sbjct: 361 KDNARKTHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDFNTKFLH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ + EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLKIDGMKELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDKAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAF 676
G + LV SVD VK ML A
Sbjct: 481 GNHFLTLVEDSSVDRVKKMLDMAL 504
>gi|89331097|emb|CAJ80915.1| phytochrome A [Euphrasia alsa]
Length = 620
Score = 718 bits (1853), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/525 (64%), Positives = 411/525 (78%), Gaps = 8/525 (1%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ L+ID EP+ P +VP+TAAGAL+SYKLA+KAISR QSLPSG++ L
Sbjct: 1 SGKPFYAIIHRVTASLIIDFEPIKPHEVPMTAAGALQSYKLASKAISRFQSLPSGSMERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
C+ +V EV +LTGYDRVM+YKFHED+HGEV+ E +P LEPY+G HYPATDIPQA+RFL
Sbjct: 61 CETMVQEVFELTGYDRVMIYKFHEDDHGEVLTEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDC A V+VIQD L L+LCGSTLRAPH CH +YMENM SIASLVMSV
Sbjct: 121 MKNKVRMICDCRANHVRVIQDVNLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 340 INEAEDELDNDQ-----EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEV 394
+NE +E D ++ ++LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKE+
Sbjct: 181 VNEGNEEAGPDDSSQHLDKRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEL 240
Query: 395 ELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVT 454
EL Q+ EK+ILRTQT+LCDMLLRD+P+GIV+Q+PNVMDLVKCDGA L ++ + LG+T
Sbjct: 241 ELENQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAILLHKNQKHRLGIT 300
Query: 455 PTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWF 514
P++ QI+DI WL EYH STGLSTDSL +AG+PGALALGD VCG+A+VKIT +D+LFWF
Sbjct: 301 PSDFQIRDIVSWLDEYHHDSTGLSTDSLYDAGFPGALALGDIVCGMASVKITDRDWLFWF 360
Query: 515 RSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLI 574
RSHTA EI+WGG+KH+ G +D RKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLI
Sbjct: 361 RSHTASEIRWGGSKHEQGERDDSRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLI 420
Query: 575 LRGSLQDEVAEDSKM---IVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASG 631
LR + E+ E + + + +I+ + EL +T+EMVRLIETA+VPI AV G
Sbjct: 421 LRNASSKEMGERKDLEGVEIQARLNELQIDGVQELEAVTSEMVRLIETASVPIFAVGVDG 480
Query: 632 NVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
VNGWN+K A LTGL VD+AIG + LV S + V ML A
Sbjct: 481 LVNGWNTKIANLTGLPVDKAIGVHFLSLVEESSAEAVSKMLELAL 525
>gi|345424280|gb|AEN85244.1| phytochrome A, partial [Coincya longirostra]
Length = 595
Score = 718 bits (1853), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/501 (67%), Positives = 409/501 (81%), Gaps = 2/501 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFHED+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A VKV
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE-DELDNDQEQGRK 356
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE E D+ + ++ ++
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHTCHLQYMANMDSIASLVMAVVVNEEEADDSTTETQKRKR 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LCDML
Sbjct: 181 LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG+TP+E Q+ +IA WL EYH STG
Sbjct: 241 MRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSEFQLHEIASWLCEYHTDSTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL +AG+P ALALGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD KD
Sbjct: 301 LSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDDKDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVNVPS 595
R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E + + I++
Sbjct: 361 ARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFRDGETTDVNTKIIHSKL 420
Query: 596 VDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTA 655
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AIG
Sbjct: 421 NDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAIGKH 480
Query: 656 LVDLVAGDSVDVVKNMLSSAF 676
+ LV SV++VK ML A
Sbjct: 481 FLTLVEDSSVEIVKRMLEKAL 501
>gi|406685395|gb|AFS51138.1| phytochrome P, partial [Metasequoia glyptostroboides]
Length = 531
Score = 717 bits (1852), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/484 (71%), Positives = 401/484 (82%), Gaps = 2/484 (0%)
Query: 195 LKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECR 254
+ S +LA +A SRLQ++PSG+I LLCD +V EV +LTGYDRVMVYKFHEDEHGEVVAE R
Sbjct: 19 MPSQRLAVRATSRLQAVPSGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDEHGEVVAEIR 78
Query: 255 RPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTL 314
R DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ ++L QPL L GSTL
Sbjct: 79 RSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRASPVRVIQAEELKQPLCLVGSTL 138
Query: 315 RAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGR-KLWGLVVCHHTSPRFVPF 373
RAPHGCHA+YM NMGSIASLVM+V +N + + + KLWGLVVCHHTSPR VPF
Sbjct: 139 RAPHGCHAQYMANMGSIASLVMAVIVNGNGNGEEGGSGRSSVKLWGLVVCHHTSPRAVPF 198
Query: 374 PLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMD 433
PLR ACEFL+Q FG+Q+N E++L+AQL E +ILRTQT+LCDMLLRD+P+GIVTQ+P++MD
Sbjct: 199 PLRSACEFLMQTFGLQINMELQLAAQLTENNILRTQTLLCDMLLRDAPIGIVTQSPSIMD 258
Query: 434 LVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALAL 493
LVKCDGAALYY GK WLLGVTPTE QIKDIA+WLLEYH STGLSTDSL +AGYPGA +L
Sbjct: 259 LVKCDGAALYYGGKFWLLGVTPTEAQIKDIADWLLEYHGDSTGLSTDSLADAGYPGAASL 318
Query: 494 GDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVV 553
GDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD R+MHPRSSFKAFLEVV
Sbjct: 319 GDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDARRMHPRSSFKAFLEVV 378
Query: 554 KQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEM 613
K+RSLPWE+VEMDAIHSLQLILRGS QD D+K +V+ D R++ IDEL + +EM
Sbjct: 379 KRRSLPWENVEMDAIHSLQLILRGSFQDIDDSDTKTMVHARLNDLRLQGIDELSSVASEM 438
Query: 614 VRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNML 672
VRLIETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ ML
Sbjct: 439 VRLIETATAPILAVDSGGIVNGWNAKVAELTGLPVAEAMGKSLVHDLVFEESMETVEKML 498
Query: 673 SSAF 676
A
Sbjct: 499 YHAL 502
>gi|51320417|gb|AAU00359.1| phytochrome [Celastrus scandens]
Length = 391
Score = 717 bits (1852), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/391 (85%), Positives = 363/391 (92%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVP+TAAGALKSYKLAAKAISRLQSLPS N+SLLCDVLV EVS+LTGYDRVM
Sbjct: 1 DLEPVNPADVPITAAGALKSYKLAAKAISRLQSLPSSNMSLLCDVLVKEVSELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFH+D+HGEVVAEC PDLEPYLG HYPATDIPQASRFL MKNKVRMICDCLAPPVKV
Sbjct: 61 VYKFHDDDHGEVVAECCIPDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCLAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKL 357
+QDK+L QPLSLCGSTLR+PHGCHA+YM NMGSIASLVMS+TINE +DE ++DQ++ RKL
Sbjct: 121 LQDKRLAQPLSLCGSTLRSPHGCHAQYMANMGSIASLVMSLTINEDDDETNSDQQKRRKL 180
Query: 358 WGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLL 417
WGLVVCHHT+PRFVPFPLRYACEFLIQVFG Q+NKEVEL+ QL+EKHILRTQT+LCDMLL
Sbjct: 181 WGLVVCHHTTPRFVPFPLRYACEFLIQVFGGQINKEVELATQLKEKHILRTQTLLCDMLL 240
Query: 418 RDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGL 477
RDSPVGI+TQ+PNVMDLVKCDGAALYYR K WLLGVTPTE QIKDIAEWLL+YH STGL
Sbjct: 241 RDSPVGILTQSPNVMDLVKCDGAALYYRNKFWLLGVTPTEIQIKDIAEWLLDYHSESTGL 300
Query: 478 STDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGG 537
ST SL+EAGYP A LG+AVCG+AAVKITSKDFLFWFRSHTAKE+KWGGAKHD KD G
Sbjct: 301 STXSLMEAGYPDASILGEAVCGMAAVKITSKDFLFWFRSHTAKEMKWGGAKHDPADKDDG 360
Query: 538 RKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
R+MHPRSSFKAFLEVVK+RSLPWEDVEM AI
Sbjct: 361 RRMHPRSSFKAFLEVVKRRSLPWEDVEMXAI 391
>gi|89331045|emb|CAJ80889.1| phytochrome A [Boschniakia rossica]
Length = 592
Score = 717 bits (1851), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/513 (66%), Positives = 409/513 (79%), Gaps = 5/513 (0%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ GL+ID EPV P DVP+TAAGAL+SYKLAAKAI+RLQ+LPSG++ L
Sbjct: 1 SGKPFYAIIHRVTGGLIIDFEPVKPHDVPMTAAGALQSYKLAAKAITRLQALPSGSMERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
CD +V EV +LTGYDRVM+YKFH+D+HGEV E +P LEPY+G HYPATDIPQA+RFL
Sbjct: 61 CDTMVQEVFELTGYDRVMIYKFHDDDHGEVFTEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDC A VKV+QD+ L L+LCGSTLRAPH CH +YMENM SIASLVMSV
Sbjct: 121 MKNKVRMICDCRANHVKVVQDENLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 340 INEAEDELDNDQEQG----RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVE 395
+NE +E D G ++LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKE+E
Sbjct: 181 VNEGNEEDGPDSSSGPDKRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKELE 240
Query: 396 LSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTP 455
L Q+ EK+ILRTQT+LCD+LLRD+P+GIV+Q+PNVMDLVKCDGA L Y+ + LG+TP
Sbjct: 241 LKNQMLEKNILRTQTLLCDLLLRDAPLGIVSQSPNVMDLVKCDGAVLLYKNTKYRLGLTP 300
Query: 456 TEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFR 515
++ Q++DI WL EYHR STGLSTDSL +A +PGA ALGDAVCG+AAV+IT D+LFWFR
Sbjct: 301 SDFQVRDIVSWLDEYHRDSTGLSTDSLYDADFPGARALGDAVCGMAAVRITDSDWLFWFR 360
Query: 516 SHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLIL 575
SHTA EI+WGG KH+ G KD GRKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLIL
Sbjct: 361 SHTAAEIRWGGVKHEPGEKDDGRKMHPRSSFKAFLEVVKARSLPWKDYEMDAIHSLQLIL 420
Query: 576 RGSLQDEVAED-SKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVN 634
R + ++ D ++ + +I+ E+ + +EMVRLIETA+VPI AVD G VN
Sbjct: 421 RNAFKESEGRDLESREIHARLNELQIDGAREIEAVASEMVRLIETASVPIFAVDVDGLVN 480
Query: 635 GWNSKAAELTGLTVDQAIGTALVDLVAGDSVDV 667
GWN+K A+LTGL VD+AIG+ + LV + +V
Sbjct: 481 GWNTKIADLTGLCVDKAIGSHFLALVEKEEQNV 513
>gi|39753867|gb|AAR30481.1| PHYC [Gymnosporia senegalensis]
Length = 392
Score = 717 bits (1851), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/392 (85%), Positives = 366/392 (93%), Gaps = 1/392 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVP+TAAGALKSYKLAAKAISRLQSLPSGN+SLLCDVLV EVS+LTGYDRVM
Sbjct: 1 DLEPVNPADVPITAAGALKSYKLAAKAISRLQSLPSGNMSLLCDVLVKEVSELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECR-RPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVK 296
VY+FH+D+HGEVVAEC RPDLEPYLG HYPATDIPQASRFL MKNKVRMICDCLAPPVK
Sbjct: 61 VYRFHDDDHGEVVAECCCRPDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCLAPPVK 120
Query: 297 VIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRK 356
V+QDK+L QPLSL GSTLR+PHGCHA+YM NMGSIASLVMSVTINE EDE ++DQ++GRK
Sbjct: 121 VLQDKRLAQPLSLGGSTLRSPHGCHAQYMTNMGSIASLVMSVTINEDEDETNSDQQKGRK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHH++PRFVPFPLRYACEFLIQVFGVQ+NKEVEL+ QL+EKHILRTQTVLCDML
Sbjct: 181 LWGLVVCHHSTPRFVPFPLRYACEFLIQVFGVQINKEVELATQLKEKHILRTQTVLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PVGI+TQ+PNVMDLVKCDGAALYYR K WLLGVTPTE Q+KDIAEWLLEYH STG
Sbjct: 241 LRDAPVGILTQSPNVMDLVKCDGAALYYRNKFWLLGVTPTETQVKDIAEWLLEYHSESTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGY A LG+AVCG+AA+KITSKDFLFWFRSHTAKE+KWGGAKHD KD
Sbjct: 301 LSTDSLMEAGYLDASILGEAVCGMAAIKITSKDFLFWFRSHTAKEMKWGGAKHDPDDKDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
G++MHPRSSFKAFL VVK+RSLPWEDVEMDAI
Sbjct: 361 GKRMHPRSSFKAFLVVVKRRSLPWEDVEMDAI 392
>gi|40647515|gb|AAR88471.1| phytochrome C [Sphedamnocarpus sp. Davis 39-01]
Length = 392
Score = 717 bits (1851), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/392 (84%), Positives = 363/392 (92%), Gaps = 1/392 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGNIS+LCDVLV EV DLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNISVLCDVLVKEVRDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVV+ECRR DLE YLG HYPATDIPQASRFL MKNKVRMICDCLAPPVKV
Sbjct: 61 VYKFHEDEHGEVVSECRRSDLESYLGLHYPATDIPQASRFLFMKNKVRMICDCLAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ-GRK 356
IQD++L QPLSLCGSTLR+PHGCH++YM NMG+IASLVMSVTINE +D +D DQ+Q RK
Sbjct: 121 IQDERLPQPLSLCGSTLRSPHGCHSQYMTNMGTIASLVMSVTINEDDDTMDGDQQQMARK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQ+NKEVEL+AQ+REKHIL+ QT+LCDML
Sbjct: 181 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQINKEVELAAQVREKHILQIQTMLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PV I+TQ+PNVMDLVK DG ALY++ K WLLGVTPTEEQI+DIAEWLL+YH G+TG
Sbjct: 241 LRDAPVAIITQSPNVMDLVKSDGTALYFKNKTWLLGVTPTEEQIRDIAEWLLQYHSGNTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGYPGA ALGD+VCG+AAV ITS+DFLFWFRSHTAKEIKWGGAKHD KD
Sbjct: 301 LSTDSLMEAGYPGASALGDSVCGMAAVSITSRDFLFWFRSHTAKEIKWGGAKHDPDDKDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
RKMHPRSSFKAFLEVVK RS+PWED+EMDAI
Sbjct: 361 LRKMHPRSSFKAFLEVVKWRSMPWEDIEMDAI 392
>gi|89331047|emb|CAJ80890.1| phytochrome A [Boschniakia strobilacea]
Length = 608
Score = 717 bits (1851), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/521 (65%), Positives = 413/521 (79%), Gaps = 4/521 (0%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ L+ID EPV P +VP+TAAGAL+SYKLAAKAI+RLQ+LP G++ L
Sbjct: 1 SGKPFYAIIHRVTGSLIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALPGGSMERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
CD +V EV +LTGYDRVM+YKFH+D+HGEV E +P LEPY+G HYPATDIPQA+RFL
Sbjct: 61 CDTMVQEVFELTGYDRVMIYKFHDDDHGEVSTEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDC A VKV+QD+ L L+LCGSTLRAPH CH +YMENM SIASLVMSV
Sbjct: 121 MKNKVRMICDCRANHVKVVQDENLSFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 340 INEA-EDELDNDQ--EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVEL 396
+NE ED D+ ++ + LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKE EL
Sbjct: 181 VNEGNEDGPDSSSVPDKRKTLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIYVNKEFEL 240
Query: 397 SAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPT 456
Q+ EK+ILRTQT+LCD+LLRD+P+GIV+Q+PNVMD VKCDGA L Y+ + LG+TP+
Sbjct: 241 ENQMLEKNILRTQTLLCDLLLRDAPLGIVSQSPNVMDPVKCDGAVLLYKNTKYRLGLTPS 300
Query: 457 EEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRS 516
+ QI+DI WL EYHR STGLSTDSL +AG+PGAL+L DAVCG+ AV+IT +D+LFWFRS
Sbjct: 301 DFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALSLCDAVCGMVAVRITERDWLFWFRS 360
Query: 517 HTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILR 576
HTA EI+WGGAKH+ G D GRKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR
Sbjct: 361 HTAAEIQWGGAKHEPGETDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILR 420
Query: 577 GSLQDEVAEDSK-MIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNG 635
+ ++ DS+ ++ D +I+ + E+ +T+EMVRLIETA+VPI AVD G VNG
Sbjct: 421 NAFKESEGRDSESREIHARLHDLQIDGVREIEAVTSEMVRLIETASVPIFAVDVDGLVNG 480
Query: 636 WNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
WN+K A+LTGL VD+AIG + LV S D V ML A
Sbjct: 481 WNTKIADLTGLCVDKAIGWHFLALVEDSSADTVSKMLELAL 521
>gi|89330094|emb|CAJ80959.1| phytochrome A [Pedicularis densispica]
Length = 612
Score = 717 bits (1851), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/525 (66%), Positives = 420/525 (80%), Gaps = 8/525 (1%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ L++D EPV P DVP+TAAGAL+SYKLAAKAI+RLQ+L SG++ L
Sbjct: 1 SGKPFYAIVHRVTGSLIVDFEPVKPHDVPMTAAGALQSYKLAAKAITRLQALSSGSLERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
CD + EV +LTGYDRVM+YKFHED+HGEV++E +P LEPYLG HYPATDIPQA+RFL
Sbjct: 61 CDTMSQEVFELTGYDRVMIYKFHEDDHGEVLSEITKPGLEPYLGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDC A V+VIQD L L+LCGSTLRAPH CH +YMENM SIASLVMSV
Sbjct: 121 MKNKVRMICDCRANHVRVIQDDNLHFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 340 INEA-EDELDNDQ-----EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKE 393
INE EDE ++ ++ ++LWGLVVCH+T+PRFVPFPLRYACEFL+QVF + V+KE
Sbjct: 181 INEGNEDEPESSSSSSHPDKRKRLWGLVVCHNTTPRFVPFPLRYACEFLVQVFAIHVSKE 240
Query: 394 VELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGV 453
+EL Q EK+ILRTQT+LCD+LLRD+P+GIV+++PNVMDLVKC+GA L ++ K + LG+
Sbjct: 241 IELENQTLEKNILRTQTLLCDLLLRDAPLGIVSKSPNVMDLVKCNGAILIHKTKKYRLGM 300
Query: 454 TPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFW 513
TP++ QI+DI WL EYHR STGLSTDSL +AG+PGALALGDAVCG+AAV+IT KD+LFW
Sbjct: 301 TPSDFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITDKDWLFW 360
Query: 514 FRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQL 573
FRSHTA EI+WGGAKH+ KD GRKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQL
Sbjct: 361 FRSHTASEIRWGGAKHEPDDKDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQL 420
Query: 574 ILRGSLQDEV-AEDSK-MIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASG 631
ILR + E A D K ++ +++ + EL +T+EMVRLIETA+VPI AV A G
Sbjct: 421 ILRNASNKEAEASDVKGKEIHARLNGLQLDGMQELDAVTSEMVRLIETASVPIFAVGADG 480
Query: 632 NVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
VNGWN+K A+LTGL VD+A G+ V LV SV+ VK ML A
Sbjct: 481 LVNGWNTKIADLTGLPVDRATGSHFVSLVDDSSVEAVKKMLELAL 525
>gi|21070083|gb|AAM34200.1| phytochrome C [Stigmaphyllon sagraeanum]
Length = 392
Score = 717 bits (1850), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/392 (84%), Positives = 363/392 (92%), Gaps = 1/392 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLV EV DLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVKEVRDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVV+ECRR DLE YL HYPATDIPQASRFL MKNK+RMICDC+APPVKV
Sbjct: 61 VYKFHEDEHGEVVSECRRSDLESYLDLHYPATDIPQASRFLFMKNKIRMICDCMAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ-GRK 356
IQD+ L QPLSLCGSTLR+PHGCHA+YM NMG+IASLVMSVTINE +D +D DQ+Q RK
Sbjct: 121 IQDETLPQPLSLCGSTLRSPHGCHAQYMTNMGTIASLVMSVTINEDDDTMDGDQQQMTRK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQ+NKEVEL+AQ+REKHIL+ QT+LCDML
Sbjct: 181 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQINKEVELAAQVREKHILQIQTMLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PV I+TQ+PNVMDLVKCDGAALY++ K WLLGVTPTEEQI+D+A+WLLE+H G+TG
Sbjct: 241 LRDAPVAIITQSPNVMDLVKCDGAALYFKNKTWLLGVTPTEEQIRDMAQWLLEHHSGNTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGYPGA ALGDAVCG+AAV ITS+DFLFWFRSHTAKE+KWGGAKHD KD
Sbjct: 301 LSTDSLMEAGYPGASALGDAVCGMAAVSITSRDFLFWFRSHTAKEVKWGGAKHDPDDKDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
RKMHPRSSFKAFLEVVK RS+PWED+EMDAI
Sbjct: 361 LRKMHPRSSFKAFLEVVKWRSMPWEDIEMDAI 392
>gi|21070025|gb|AAM34171.1| phytochrome C [Heladena multiflora]
Length = 392
Score = 717 bits (1850), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/392 (85%), Positives = 360/392 (91%), Gaps = 1/392 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLV EV DLTGYDRVM
Sbjct: 1 DLEPVNPFDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVKEVRDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVV+ECRR DLE YLG HYPATDIPQASRFL MKNKVRMICDCLAPPVKV
Sbjct: 61 VYKFHEDEHGEVVSECRRSDLESYLGLHYPATDIPQASRFLFMKNKVRMICDCLAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ-GRK 356
IQD++L QPLSLCGSTLR+PHGCHA+YM NMG+IASLVMSVTINE +D +D DQ+Q RK
Sbjct: 121 IQDERLPQPLSLCGSTLRSPHGCHAQYMANMGTIASLVMSVTINEDDDTMDGDQQQMARK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS +FVPFPLRYACEFLIQVFGVQ+NKEVEL+AQ REKHIL+ QT LCDML
Sbjct: 181 LWGLVVCHHTSTQFVPFPLRYACEFLIQVFGVQINKEVELAAQAREKHILQIQTTLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PV I+TQ+PNVMDLVKCDGAALYY+ K LLGVTPTE QI+DIAEWLLEYH G+TG
Sbjct: 241 LRDAPVAIITQSPNVMDLVKCDGAALYYKNKFRLLGVTPTEAQIRDIAEWLLEYHSGNTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGYPGA LGDAVCG+AAV ITS+DFLFWFRSHTAKEIKWGGAKHD KD
Sbjct: 301 LSTDSLMEAGYPGASVLGDAVCGMAAVSITSRDFLFWFRSHTAKEIKWGGAKHDPDDKDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
GRKMHPRSSFKAFLEVVK RSLPWED+EMDAI
Sbjct: 361 GRKMHPRSSFKAFLEVVKWRSLPWEDMEMDAI 392
>gi|224576262|gb|ACN56824.1| phytochrome A [Cremolobus subscandens]
Length = 577
Score = 716 bits (1849), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/505 (67%), Positives = 411/505 (81%), Gaps = 6/505 (1%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKA++RLQSLPSG++ LCD +V EV +LTG+DRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAVTRLQSLPSGSMERLCDTMVQEVFELTGFDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFHED+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN----DQEQ 353
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D Q Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDTPESTTQPQ 180
Query: 354 GRK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+L
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W+LG TP+E +++IA WL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWILGTTPSEFHLQEIASWLCEYHT 300
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD G
Sbjct: 301 DSTGLSTDSLHDAGFPKALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPG 360
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIV 591
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E+ + + I+
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGEITDVNTKII 420
Query: 592 NVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
+ D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 652 IGTALVDLVAGDSVDVVKNMLSSAF 676
IG L+ LV SV+ VK ML +A
Sbjct: 481 IGKRLLSLVEDCSVEAVKRMLQNAL 505
>gi|406685367|gb|AFS51124.1| phytochrome P, partial [Glyptostrobus pensilis]
Length = 531
Score = 716 bits (1849), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/482 (70%), Positives = 400/482 (82%), Gaps = 2/482 (0%)
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S +LA +A SRLQ++P+G+I LLCD +V EV +LTGYDRVMVYKFHEDEHG VVAE RR
Sbjct: 21 SQRLAVRATSRLQAVPNGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDEHGGVVAEIRRS 80
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ ++L QPL L GSTLRA
Sbjct: 81 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRANPVRVIQAEELKQPLCLVGSTLRA 140
Query: 317 PHGCHARYMENMGSIASLVMSVTIN-EAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPL 375
PHGCHA+YM NMGSIASLVM+V +N DE + KLWGLVVCHHTSPR VPFPL
Sbjct: 141 PHGCHAQYMANMGSIASLVMAVIVNGNGNDEEGSSGRSAVKLWGLVVCHHTSPRAVPFPL 200
Query: 376 RYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLV 435
R ACEFL+Q FG+Q+N E++L+AQL E +ILRTQT+LCDMLLRD+P+GIVTQ+P++MDLV
Sbjct: 201 RSACEFLMQTFGLQINMEMQLAAQLTENNILRTQTLLCDMLLRDAPIGIVTQSPSIMDLV 260
Query: 436 KCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGD 495
KCDGAALYY GK WLLGVTPT QIKDIA+WLLEYH STGLSTDSL +AGYPGA +LGD
Sbjct: 261 KCDGAALYYGGKFWLLGVTPTGAQIKDIADWLLEYHGDSTGLSTDSLADAGYPGAASLGD 320
Query: 496 AVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQ 555
AVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD R+MHPRSSFKAFLEVVK+
Sbjct: 321 AVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDARRMHPRSSFKAFLEVVKR 380
Query: 556 RSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVR 615
RSLPWE+VEMD IHSLQLILRGS QD ++K +V+V D +++ IDEL + +EMVR
Sbjct: 381 RSLPWENVEMDTIHSLQLILRGSFQDIDDSETKTMVHVQLHDLKLQGIDELSSVASEMVR 440
Query: 616 LIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSS 674
LIETA VPILAVD++G VNGWN+KAAELTGL +A+G +LV DLV +S++ V+ ML
Sbjct: 441 LIETATVPILAVDSAGIVNGWNAKAAELTGLPAGEAMGKSLVHDLVFEESMETVEKMLYH 500
Query: 675 AF 676
A
Sbjct: 501 AL 502
>gi|406685409|gb|AFS51145.1| phytochrome P, partial [Sequoiadendron giganteum]
Length = 531
Score = 716 bits (1849), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/484 (70%), Positives = 398/484 (82%), Gaps = 2/484 (0%)
Query: 195 LKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECR 254
+ S +LA +A SRLQ++P+G+I LLCD +V EV +LTGYDRVMVYKFHEDEHGEVVAE R
Sbjct: 19 MPSQRLAVRATSRLQAVPNGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDEHGEVVAEIR 78
Query: 255 RPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTL 314
R DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ ++L QPL L GSTL
Sbjct: 79 RSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRASPVRVIQAEELKQPLCLVGSTL 138
Query: 315 RAPHGCHARYMENMGSIASLVMSVTIN-EAEDELDNDQEQGRKLWGLVVCHHTSPRFVPF 373
RAPHGCHA+YM NMGSIASL M+V +N DE KLWGLVVCHHTSPR VPF
Sbjct: 139 RAPHGCHAQYMANMGSIASLAMAVIVNGNGNDEEGASGRSSVKLWGLVVCHHTSPRAVPF 198
Query: 374 PLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMD 433
PLR ACEFL+Q FG+Q+N E++L+AQL E +ILRTQT+LCDMLLRD+P+GIV+Q+P++MD
Sbjct: 199 PLRSACEFLMQTFGLQINMELQLAAQLTENNILRTQTLLCDMLLRDAPIGIVSQSPSIMD 258
Query: 434 LVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALAL 493
LVKCDGAALYY GK WLLGVTPTE QIKDIA+WLLEYH STGLSTDSL +AGYPGA +L
Sbjct: 259 LVKCDGAALYYGGKFWLLGVTPTEAQIKDIADWLLEYHGDSTGLSTDSLADAGYPGATSL 318
Query: 494 GDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVV 553
GDAVCG+AA +ITSKDFLFWFRSHT KE+KWGGAKH KD R+MHPRSSFKAFLEVV
Sbjct: 319 GDAVCGMAAARITSKDFLFWFRSHTVKEMKWGGAKHHPDDKDDSRRMHPRSSFKAFLEVV 378
Query: 554 KQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEM 613
K+RSLPWE+VEMDAIHSLQLILRGS QD D+K +V+ D +++ IDEL + +EM
Sbjct: 379 KRRSLPWENVEMDAIHSLQLILRGSFQDIDDSDTKTMVHARLNDLKLQGIDELSSVASEM 438
Query: 614 VRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNML 672
VRLIETA PILAVD+ G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ ML
Sbjct: 439 VRLIETATAPILAVDSGGIVNGWNAKVAELTGLPVAEAMGKSLVHDLVFEESMETVEKML 498
Query: 673 SSAF 676
A
Sbjct: 499 HHAL 502
>gi|20530201|gb|AAM27032.1| phytochrome C [Rhynchophora phillipsonii]
Length = 392
Score = 716 bits (1849), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/392 (84%), Positives = 362/392 (92%), Gaps = 1/392 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLV EV DLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVKEVRDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVV+ECRR DLE YLG HYPATDIPQASRFL MKNKVRMICDC+APPVKV
Sbjct: 61 VYKFHEDEHGEVVSECRRSDLESYLGLHYPATDIPQASRFLFMKNKVRMICDCVAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ-GRK 356
IQD++L QPLSLC STLR+PHGCHA+YM NMG +ASLVMSVT+NE +D +D+DQ Q RK
Sbjct: 121 IQDERLPQPLSLCASTLRSPHGCHAQYMTNMGIVASLVMSVTVNEEDDMVDSDQPQMARK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS RFVPFPLRYACEFLIQVFGVQ+NKEVEL+AQ+REKHIL+ QT+LCDML
Sbjct: 181 LWGLVVCHHTSTRFVPFPLRYACEFLIQVFGVQINKEVELAAQVREKHILQIQTMLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PV I+TQ+PNVMDLVKCDGAALY++ K WLLGV+PTEEQI+DIAEWLLEYH G+TG
Sbjct: 241 LRDAPVAIITQSPNVMDLVKCDGAALYFKNKTWLLGVSPTEEQIRDIAEWLLEYHSGNTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGYPGA ALGDAVCG+AAV ITS+DFL WFRSHTAKEIKWGGAKHD KD
Sbjct: 301 LSTDSLMEAGYPGAAALGDAVCGMAAVSITSRDFLLWFRSHTAKEIKWGGAKHDPDDKDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
GRKMHPRSSFKAFLEVVK RS+PWED+EMDAI
Sbjct: 361 GRKMHPRSSFKAFLEVVKWRSMPWEDMEMDAI 392
>gi|89330096|emb|CAJ80960.1| phytochrome A [Pedicularis foliosa]
Length = 611
Score = 716 bits (1849), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/524 (65%), Positives = 417/524 (79%), Gaps = 7/524 (1%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ L++D EPV P +VP+TAAGAL+SYKLAAKAI+RLQ+LPSG++ L
Sbjct: 1 SGKPFYAIIHRVTGSLIVDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALPSGSLERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
CD +V EV +LTGYDRVM+YKFH+D+HGEV++E +P LEPY+G HYPATDIPQA+RFL
Sbjct: 61 CDTMVQEVFELTGYDRVMIYKFHDDDHGEVLSEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDC A V+VIQD L L+LCGSTLRAPH CH +YMENM SIASLVMSV
Sbjct: 121 MKNKVRMICDCRANHVRVIQDDNLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 340 INEA-EDELDNDQ----EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEV 394
+NE ED D+ ++ ++LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKE
Sbjct: 181 VNEGNEDGPDSSSSSHPDKKKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEF 240
Query: 395 ELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVT 454
EL Q EK+ILRTQT+LCDMLLRD+P+GIV+++PNVMDLVKC+GA L ++ K + LG+T
Sbjct: 241 ELENQTLEKNILRTQTLLCDMLLRDAPLGIVSKSPNVMDLVKCNGAILIHKTKKYRLGMT 300
Query: 455 PTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWF 514
P++ QI+DI WL EYHR STGLSTDSL +AG PGALALGDAVCG+AAV+IT +D+LFWF
Sbjct: 301 PSDFQIRDIVSWLDEYHRDSTGLSTDSLYDAGLPGALALGDAVCGMAAVRITDEDWLFWF 360
Query: 515 RSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLI 574
RSHTA EI+WGGAKH+ G KD GRKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQL+
Sbjct: 361 RSHTAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLV 420
Query: 575 LRGSLQDEVAE--DSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGN 632
LR + E E + ++ D +++ I EL +T+EMVRLIETA+VPI AV G
Sbjct: 421 LRNASNKEAEERDTNGKEIHAGLNDLQLDGIQELEAVTSEMVRLIETASVPIFAVGVDGL 480
Query: 633 VNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
VNGWN+K A+LTGL VD+A+G+ V LV S + V ML A
Sbjct: 481 VNGWNTKIADLTGLPVDKAMGSHFVALVDDSSAEAVNRMLELAL 524
>gi|21069955|gb|AAM34136.1| phytochrome C [Janusia californica]
Length = 392
Score = 716 bits (1848), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/392 (85%), Positives = 363/392 (92%), Gaps = 1/392 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLA+KAISRLQSLPSGNISLLCDVLV EV DLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLASKAISRLQSLPSGNISLLCDVLVKEVRDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVV+ECRR DLE YLG HYPATDIPQASRFL MKNKVRMICDCLAPPVKV
Sbjct: 61 VYKFHEDEHGEVVSECRRSDLESYLGLHYPATDIPQASRFLFMKNKVRMICDCLAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ-GRK 356
IQD++L QPLSLCGSTLR+PHGCHA+YM NMG+IASLVMSVT+NE +D +D DQ+Q RK
Sbjct: 121 IQDERLPQPLSLCGSTLRSPHGCHAQYMTNMGTIASLVMSVTVNEDDDTMDGDQQQMTRK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTSP+FVPFPLRYACEFLIQVFGVQ+NKEVEL+AQ+REKHIL+ QT+LCDML
Sbjct: 181 LWGLVVCHHTSPQFVPFPLRYACEFLIQVFGVQINKEVELAAQVREKHILQIQTMLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PV I+TQ+PNVMDLVKCDGAALY++ K WLLGVTPTEEQI+ IAEWLL+YH G+TG
Sbjct: 241 LRDAPVAIITQSPNVMDLVKCDGAALYFKNKTWLLGVTPTEEQIRGIAEWLLKYHSGNTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGYPGA LGDAVCG+AAV ITS+DFLFWFRSHTAKEIKWGGAKHD KD
Sbjct: 301 LSTDSLMEAGYPGASGLGDAVCGMAAVSITSRDFLFWFRSHTAKEIKWGGAKHDPDDKDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
RKMHPRSSFKAFLEVVK RS+PWEDVEMDAI
Sbjct: 361 LRKMHPRSSFKAFLEVVKWRSMPWEDVEMDAI 392
>gi|21070057|gb|AAM34187.1| phytochrome C [Ectopopterys soejartoi]
Length = 392
Score = 716 bits (1848), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/392 (85%), Positives = 363/392 (92%), Gaps = 1/392 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLV EV DLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVKEVRDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVV+ECRR DLE YLG HYPATDIPQASRFL MKNKVRMICDC+APPV+V
Sbjct: 61 VYKFHEDEHGEVVSECRRSDLESYLGLHYPATDIPQASRFLFMKNKVRMICDCMAPPVEV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ-GRK 356
IQD++L QPLSLCGSTLR+PHGCHA+YM NMG+ ASLVMSVTINE + +D DQ+Q +K
Sbjct: 121 IQDERLPQPLSLCGSTLRSPHGCHAQYMTNMGTTASLVMSVTINEDDHMMDGDQQQMTKK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHT+PRFVPFPLR ACEFLIQVFGVQ+NKEVEL+AQ+REKHIL+ QT+LCDML
Sbjct: 181 LWGLVVCHHTNPRFVPFPLRDACEFLIQVFGVQINKEVELAAQVREKHILQIQTMLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PV I+TQ+PNVMDLVKCDGAALY++ K WLLGVTPTEEQI+DIAEWLLEYH G+TG
Sbjct: 241 LRDAPVAIITQSPNVMDLVKCDGAALYFKNKTWLLGVTPTEEQIRDIAEWLLEYHSGNTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGYPGA ALGDAVCG+AAV ITS+DFLFWFRSHTAKEIKWGGAKHD KD
Sbjct: 301 LSTDSLMEAGYPGASALGDAVCGMAAVSITSRDFLFWFRSHTAKEIKWGGAKHDPDDKDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
GRKMHPRSSFKAFLEVVK RS+PWEDVEMDAI
Sbjct: 361 GRKMHPRSSFKAFLEVVKWRSMPWEDVEMDAI 392
>gi|39753817|gb|AAR30456.1| PHYC [Bergia texana]
Length = 390
Score = 716 bits (1848), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/391 (85%), Positives = 360/391 (92%), Gaps = 1/391 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGNISL CDVLV EVSDLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNISL-CDVLVKEVSDLTGYDRVM 59
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEV+AEC RPDLEPYLG HYPATDIPQASRFL MKNKVRMICDC+APPVKV
Sbjct: 60 VYKFHEDEHGEVIAECHRPDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCMAPPVKV 119
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKL 357
IQDK+L QPLSLCGSTLR+PHGCHA YM NMGSIASLV+SVTIN+ +D+++ DQ GRKL
Sbjct: 120 IQDKRLTQPLSLCGSTLRSPHGCHAEYMANMGSIASLVLSVTINDEDDKIEGDQLLGRKL 179
Query: 358 WGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLL 417
WGLVVCHH SPRF+PFPLRYACEFLIQVFGVQ++KEV L+AQ REKHILRTQ+VLCDMLL
Sbjct: 180 WGLVVCHHASPRFIPFPLRYACEFLIQVFGVQISKEVALAAQTREKHILRTQSVLCDMLL 239
Query: 418 RDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGL 477
RD+PV I+TQ+PNVMDLVKCDGAALYYR K WLLGVTP+E QI+ IA+WLLE H GSTGL
Sbjct: 240 RDAPVAIITQSPNVMDLVKCDGAALYYRKKFWLLGVTPSEAQIRGIADWLLECHSGSTGL 299
Query: 478 STDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGG 537
STDSL+EAG+PGA LGDAVCG+AAVKITSKDFLFWFRSHTAKEIKWGGAKHD KD G
Sbjct: 300 STDSLMEAGFPGASVLGDAVCGMAAVKITSKDFLFWFRSHTAKEIKWGGAKHDPDDKDDG 359
Query: 538 RKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
RKMHPRSS +AFLEVVK RSLPWEDVEMDAI
Sbjct: 360 RKMHPRSSLRAFLEVVKWRSLPWEDVEMDAI 390
>gi|406685365|gb|AFS51123.1| phytochrome P, partial [Fokienia hodginsii]
Length = 530
Score = 716 bits (1848), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/482 (70%), Positives = 399/482 (82%), Gaps = 2/482 (0%)
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S +LA +A SRLQ++P+G+I LLCD +V EV +LTGYDRVMVYKFHED+HGEVVAE RR
Sbjct: 21 SQRLAVRATSRLQAVPNGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDDHGEVVAEIRRS 80
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL MKN+VRMICDC A PVK+IQ ++LDQPL L GSTLRA
Sbjct: 81 DLEPYLGLHYPATDIPQASRFLFMKNRVRMICDCRATPVKIIQAEELDQPLCLVGSTLRA 140
Query: 317 PHGCHARYMENMGSIASLVMSVTINE-AEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPL 375
PHGCHA+YM NMGSIASL M+V +N DE + KLWGLVVCHHTSPR VPFPL
Sbjct: 141 PHGCHAQYMANMGSIASLAMAVIVNGIGNDEGGSSGRSAGKLWGLVVCHHTSPRAVPFPL 200
Query: 376 RYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLV 435
R ACEFL+Q F +Q+N E++L+AQL E +ILRTQT+LCDMLLRD+P+GIVT++P++MDLV
Sbjct: 201 RSACEFLMQTFSLQINMEMQLAAQLTENNILRTQTLLCDMLLRDAPIGIVTRSPSIMDLV 260
Query: 436 KCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGD 495
KCDGAALYY GK WLL VTPTE QIKDIA+WLLEYH STGLSTDSL +AGYPGA +LGD
Sbjct: 261 KCDGAALYYGGKFWLLEVTPTEAQIKDIADWLLEYHGDSTGLSTDSLADAGYPGAASLGD 320
Query: 496 AVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQ 555
AVCG+AA +ITSKDFLFWFRSHTA EIKWGGAKH KD GR+MHPRSSFKAFLEVVK+
Sbjct: 321 AVCGMAAARITSKDFLFWFRSHTANEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKR 380
Query: 556 RSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVR 615
RSLPWE+VEMDAIHSLQLILRGS QD ++K +V+ D R++ +DEL + EMVR
Sbjct: 381 RSLPWENVEMDAIHSLQLILRGSFQDIDDSENKTMVHARMSDLRLQGMDELSSVACEMVR 440
Query: 616 LIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSS 674
LIETA PILAVDA+G VNGWNS AAELTGL ++A+G +LV DLV +S++ V+ ML +
Sbjct: 441 LIETAHAPILAVDAAGIVNGWNSYAAELTGLPAEEAMGKSLVHDLVFDESIETVEKMLYN 500
Query: 675 AF 676
A
Sbjct: 501 AL 502
>gi|89331137|emb|CAJ80935.1| phytochrome A [Lindenbergia philippensis]
Length = 609
Score = 716 bits (1848), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/526 (65%), Positives = 414/526 (78%), Gaps = 7/526 (1%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ LVID EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ L
Sbjct: 1 SGKPFYAIIHRVTGSLVIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
CD +V EV +LTGYDRVM+YKFH+D+ GEV+ E +P LEPY+G HYPATDIPQA+RFL
Sbjct: 61 CDTMVQEVFELTGYDRVMIYKFHDDDRGEVLTEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDC A VKV+QD L L+LCGSTLRAPH CH +YMENM SIASLVMSV
Sbjct: 121 MKNKVRMICDCRAINVKVVQDGNLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 340 INEAEDELDNDQ-----EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEV 394
+NE ++E ++ ++LWGLVVCH+T+PRFVPFPLRYACEFL QVF + +NKEV
Sbjct: 181 VNEGDEEASTPDSSLHPDKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHINKEV 240
Query: 395 ELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVT 454
EL Q+ EK+IL+TQT+LCDMLLRD+P+GIV Q+PN+MDLVKCDGA + Y+ + + G+
Sbjct: 241 ELENQMLEKNILKTQTLLCDMLLRDAPLGIVNQSPNIMDLVKCDGAMMLYKNQKYRFGLA 300
Query: 455 PTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWF 514
P + QI+D+ WL YH STGLSTDSL +AG+PGALALGDAVCG+AAV+IT KD+LFWF
Sbjct: 301 PNDFQIRDLVSWLDAYHGDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITDKDWLFWF 360
Query: 515 RSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLI 574
RSHTA EI+WGGAKH+ G KD GRKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLI
Sbjct: 361 RSHTAAEIRWGGAKHERGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLI 420
Query: 575 LRGSLQDEVAED-SKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNV 633
LR + ++ +D M ++ D +I+ I EL +T+EMVRLIETA+VPI AVD G V
Sbjct: 421 LRNASREADKKDLEGMEIHARLNDLQIDGIQELE-VTSEMVRLIETASVPIFAVDGDGLV 479
Query: 634 NGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAFLAI 679
NGWN+K A+L GL V++AIG +DLV S D V ML A +
Sbjct: 480 NGWNTKIADLAGLPVEKAIGMHFLDLVEDSSADTVGKMLKLAIQGV 525
>gi|21069933|gb|AAM34125.1| phytochrome C [Caucanthus auriculatus]
Length = 392
Score = 716 bits (1848), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/392 (85%), Positives = 361/392 (92%), Gaps = 1/392 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLV EV DLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVKEVRDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVV+EC R DLE YLG HYPATDIPQASRFL MKNKVRMICDC+APPVKV
Sbjct: 61 VYKFHEDEHGEVVSECHRSDLESYLGLHYPATDIPQASRFLFMKNKVRMICDCVAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ-GRK 356
IQ+++L QPLSLCGSTLR+PHGCHA+YM NMG IASLVMSVT+NE +D +D DQ Q RK
Sbjct: 121 IQEERLPQPLSLCGSTLRSPHGCHAQYMTNMGIIASLVMSVTVNEEDDMVDGDQPQMARK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS RFVPFPLRYACEFLIQVFGVQ+NKEVEL+AQ+REKHIL+ QT+LCDML
Sbjct: 181 LWGLVVCHHTSTRFVPFPLRYACEFLIQVFGVQINKEVELAAQVREKHILQIQTMLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PV I+TQ+PNVMDLVKCDGAALY++ K WLLGVTPTEEQI+DIAEWLLEYH G+TG
Sbjct: 241 LRDAPVAIITQSPNVMDLVKCDGAALYFKNKTWLLGVTPTEEQIRDIAEWLLEYHSGNTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGYPGA ALGDAVCG+AAV ITS+DFL WFRSHTAKEIKWGGAKHD KD
Sbjct: 301 LSTDSLMEAGYPGASALGDAVCGMAAVSITSRDFLLWFRSHTAKEIKWGGAKHDPDDKDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
GRKMHPRSSFKAFLEVVK RS+PWEDVEMDAI
Sbjct: 361 GRKMHPRSSFKAFLEVVKWRSMPWEDVEMDAI 392
>gi|89330102|emb|CAJ80963.1| phytochrome A [Pedicularis kansuensis]
Length = 611
Score = 716 bits (1848), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/525 (66%), Positives = 417/525 (79%), Gaps = 9/525 (1%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ L++D EPV P DVP+TAAGAL+SYKLAAKAI+RLQ+L SG++ L
Sbjct: 1 SGKPFYAIIHRVTGSLIVDFEPVKPQDVPMTAAGALQSYKLAAKAITRLQALSSGSLERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
CD +V EV +LTGYDRVM+YKFH+D+HGEV++E +P LEPY+G HYPATDIPQA+RFL
Sbjct: 61 CDTMVQEVFELTGYDRVMIYKFHDDDHGEVLSEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDC A V+VIQD L L+LCGSTLRAPH CH +YMEN SIASLVMSV
Sbjct: 121 MKNKVRMICDCRANHVRVIQDDNLPFDLTLCGSTLRAPHSCHLQYMENTNSIASLVMSVV 180
Query: 340 INEA-EDELDNDQ----EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEV 394
INE ED D+ ++ ++LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKE+
Sbjct: 181 INEGNEDGPDSSSSSHPDKKKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEI 240
Query: 395 ELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVT 454
EL Q EK+ILRTQT+LCD+LLRD+P+GIV+++PNVMDLVKC+GA L ++ K + LG T
Sbjct: 241 ELENQTLEKNILRTQTLLCDLLLRDAPLGIVSRSPNVMDLVKCNGAILIHKTKKYRLGTT 300
Query: 455 PTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWF 514
P++ QI+DI WL EYHR STGLSTDSL +AG+PGAL+LGDAVCG+AAV+IT KD+LFWF
Sbjct: 301 PSDFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALSLGDAVCGMAAVRITDKDWLFWF 360
Query: 515 RSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLI 574
RSHTA EI+WGGAKH+ KD GRKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLI
Sbjct: 361 RSHTAAEIRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLI 420
Query: 575 LRGSLQDEVAEDSKMI---VNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASG 631
LR + E AE S M ++ D +++ + EL +T+EMVRLIETA+VPI AV A G
Sbjct: 421 LRNASNKE-AEASDMNGKEIHARLNDLQLDGMQELDAVTSEMVRLIETASVPIFAVGADG 479
Query: 632 NVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
VNGWN+K A+LTGL VD A G+ V LV S + VK ML A
Sbjct: 480 LVNGWNTKIADLTGLPVDTATGSHFVSLVDDSSAEAVKKMLELAL 524
>gi|89330084|emb|CAJ80954.1| phytochrome A [Orthocarpus bracteosus]
Length = 609
Score = 716 bits (1847), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/523 (66%), Positives = 418/523 (79%), Gaps = 7/523 (1%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ ++ID EPV P +VP+TAAGAL+SYKLAAKAI+RLQ+L SG++ L
Sbjct: 1 SGKPFYAIIHRVTGSMIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALSSGSMEQL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
C ++V EV +LTGYDRVM+YKFH+D+HGEV++E +P L+PY+G HYPATDIPQA+RFL
Sbjct: 61 CGMMVQEVFELTGYDRVMIYKFHDDDHGEVLSEITKPGLDPYVGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
+KNKVRMICDC A VKVIQD L L+LCGSTLRAPH CH +YMENM SIASLVMSV
Sbjct: 121 IKNKVRMICDCRANHVKVIQDDNLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 340 INEA-EDELDNDQ--EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVEL 396
+NE ED D+ ++ ++LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKE+EL
Sbjct: 181 VNEGNEDGPDSSSHPDEKKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEIEL 240
Query: 397 SAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPT 456
Q+ EK+ILRTQT+LCDMLLRD+P+GIV+Q+PNVMDLVKCDGA L Y+ K + LG TP+
Sbjct: 241 KNQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAVLIYKTKKYRLGKTPS 300
Query: 457 EEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRS 516
+ QI+DI WL EYHR STGLSTDSL +AG+PGALALGDAVCG+AAV+IT+ D+LFWFRS
Sbjct: 301 DFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITNTDWLFWFRS 360
Query: 517 HTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILR 576
HTA EI+WGGAKH+ G KD GRKMHPR SFKAFLEVVK RSLPW+D EMDAIHSLQLILR
Sbjct: 361 HTAAEIRWGGAKHELGEKDDGRKMHPRLSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILR 420
Query: 577 GSLQDEVAE---DSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNV 633
+ + E + K I + D +++ + EL +T+EMVRLIETA+V I AVD G V
Sbjct: 421 NASNKKAEERDVEGKEI-HARLNDLQLDGVQELEAVTSEMVRLIETASVSIFAVDVDGLV 479
Query: 634 NGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
NGWN+K A+LTGL VD+AIG + LV S +VV ML A
Sbjct: 480 NGWNTKIADLTGLPVDKAIGKHFLALVEDSSAEVVNKMLELAL 522
>gi|39753889|gb|AAR30492.1| PHYC [Pimelodendron zoanthogyne]
Length = 391
Score = 716 bits (1847), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/391 (85%), Positives = 359/391 (91%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAIS+ QSLPSGNISLLCDVLV EVSDLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKAISKSQSLPSGNISLLCDVLVKEVSDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEV+AE RPDLEPYLG HYPATDIPQASRFL MKNKVRMICDCLAPPVKV
Sbjct: 61 VYKFHEDEHGEVIAEYHRPDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCLAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKL 357
IQD+ L Q LSLCGSTLR+PHGCHA YM NMGSIASLVMSV INE E+D+DQ++GRKL
Sbjct: 121 IQDRSLAQSLSLCGSTLRSPHGCHAMYMTNMGSIASLVMSVAINEDGSEMDDDQQKGRKL 180
Query: 358 WGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLL 417
WGLVVCHHTSPRF+PFPL YACEFLIQVFGVQ+NKEVE++AQ+REKHIL+TQTVLCDMLL
Sbjct: 181 WGLVVCHHTSPRFIPFPLGYACEFLIQVFGVQINKEVEMAAQMREKHILQTQTVLCDMLL 240
Query: 418 RDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGL 477
RDSP+ I+T++PNVMDLVKCDGAALYYR K WLLGVTPTE QIKDIAEWLLE HR STGL
Sbjct: 241 RDSPMAIITRSPNVMDLVKCDGAALYYRKKFWLLGVTPTETQIKDIAEWLLECHRESTGL 300
Query: 478 STDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGG 537
STDSL+EAGYPGA +G A+CG+AAV+I SKDFLFWFRSHTAKEIKWGGAKHD KD G
Sbjct: 301 STDSLIEAGYPGASIIGKAICGMAAVRINSKDFLFWFRSHTAKEIKWGGAKHDPDDKDDG 360
Query: 538 RKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
R+MHPRSSF+AFL+VVK RSLPWEDVEMDAI
Sbjct: 361 RRMHPRSSFEAFLDVVKWRSLPWEDVEMDAI 391
>gi|406685339|gb|AFS51110.1| phytochrome P, partial [Chamaecyparis obtusa]
Length = 530
Score = 716 bits (1847), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/482 (70%), Positives = 399/482 (82%), Gaps = 2/482 (0%)
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S +LA +A SRLQ++P+G+I LLCD +V EV +LTGYDRVMVYKF ED+HGEVVAE RR
Sbjct: 21 SQRLAVRATSRLQAVPNGDIGLLCDAVVEEVRELTGYDRVMVYKFREDDHGEVVAEIRRS 80
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL MKN+VRMICDC APPV++IQ ++LDQPL L GSTLRA
Sbjct: 81 DLEPYLGLHYPATDIPQASRFLFMKNRVRMICDCRAPPVRIIQAEELDQPLCLVGSTLRA 140
Query: 317 PHGCHARYMENMGSIASLVMSVTINE-AEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPL 375
PHGCHA+YM NMGSIASL M+V +N DE + KLWGLVVCHHTSPR VPFPL
Sbjct: 141 PHGCHAQYMANMGSIASLAMAVIVNGIGNDEGGSSGRSAGKLWGLVVCHHTSPRAVPFPL 200
Query: 376 RYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLV 435
R ACEFL+Q F +Q+N E++L+AQL E +ILRTQT+LCDMLLRD+P+GIVT++P++MDLV
Sbjct: 201 RSACEFLMQTFSLQINMEMQLAAQLTENNILRTQTLLCDMLLRDAPIGIVTRSPSIMDLV 260
Query: 436 KCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGD 495
KCDGAALYY GK WLL VTPTE QIKDIA+WLLEYH STGLSTDSL +AGYPGA +LGD
Sbjct: 261 KCDGAALYYGGKFWLLEVTPTEAQIKDIADWLLEYHGDSTGLSTDSLADAGYPGAASLGD 320
Query: 496 AVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQ 555
AVCG+AA +ITSKDFLFWFRSHT KEIKWGGAKH KD GR+MHPRSSFKAFLEVVK+
Sbjct: 321 AVCGMAAARITSKDFLFWFRSHTGKEIKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKR 380
Query: 556 RSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVR 615
RSLPWE+VEMDAIHSLQLILRGS QD ++K +V+ D R++ +DEL + EMVR
Sbjct: 381 RSLPWENVEMDAIHSLQLILRGSFQDIDDSENKTMVHARMSDLRLQGMDELSSVACEMVR 440
Query: 616 LIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSS 674
LIETA PILAVDA+G VNGWNS AAELTGL ++A+G +LV DLV +S++ V+ ML +
Sbjct: 441 LIETAHAPILAVDAAGIVNGWNSYAAELTGLPAEEAMGKSLVHDLVFDESIETVEKMLYN 500
Query: 675 AF 676
A
Sbjct: 501 AL 502
>gi|20530191|gb|AAM27027.1| phytochrome C [Aspidopterys elliptica]
Length = 392
Score = 716 bits (1847), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/392 (85%), Positives = 361/392 (92%), Gaps = 1/392 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLV EV DLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVKEVRDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVV+EC R DLE YLG HYPATDIPQASRFL MKNKVRMICDC+APPVKV
Sbjct: 61 VYKFHEDEHGEVVSECLRSDLESYLGLHYPATDIPQASRFLFMKNKVRMICDCVAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ-GRK 356
IQD++L QPLSLCGSTLR+PHGCHA+YM NMG IASLVMSVT+NE +D +D DQ Q RK
Sbjct: 121 IQDERLPQPLSLCGSTLRSPHGCHAQYMTNMGIIASLVMSVTVNEDDDMVDGDQPQMARK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS RFVPFPLRYACEFLIQVFGVQ+NKEVEL+AQ+REKHIL+ QT+LCDML
Sbjct: 181 LWGLVVCHHTSTRFVPFPLRYACEFLIQVFGVQINKEVELAAQVREKHILQIQTMLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PV I+TQ+PNVMDLVKCDGAALY++ K WLLGVTPTEEQI+DIAEWLLEYH G+TG
Sbjct: 241 LRDAPVAIITQSPNVMDLVKCDGAALYFKNKTWLLGVTPTEEQIRDIAEWLLEYHSGNTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGYPGA ALGDAVCG+AAV ITS+DFL WFRSHTAKEIKWGGAKHD KD
Sbjct: 301 LSTDSLMEAGYPGASALGDAVCGMAAVSITSRDFLLWFRSHTAKEIKWGGAKHDPDDKDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
GRKMHPRSSFKAFLEVVK RS+PWED+EMDAI
Sbjct: 361 GRKMHPRSSFKAFLEVVKWRSMPWEDIEMDAI 392
>gi|21069953|gb|AAM34135.1| phytochrome C [Janusia californica]
Length = 392
Score = 716 bits (1847), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/392 (84%), Positives = 363/392 (92%), Gaps = 1/392 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLA+KAISRLQSLPSGNISLLCDVLV EV DLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLASKAISRLQSLPSGNISLLCDVLVKEVRDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVV+ECRR DLE YLG HYPATDIPQASRFL MKNKVRMICDCLAPPVKV
Sbjct: 61 VYKFHEDEHGEVVSECRRSDLESYLGLHYPATDIPQASRFLFMKNKVRMICDCLAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ-GRK 356
IQD++L QPLSLCGSTLR+PHGCHA+YM NMG+IASLVMSVT+NE +D +D DQ++ RK
Sbjct: 121 IQDERLPQPLSLCGSTLRSPHGCHAQYMTNMGTIASLVMSVTVNEGDDTMDGDQQRMTRK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTSP+FVPFPLRYACEFLIQVFGVQ+NKEVEL+AQ+REKHIL+ QT+LCDML
Sbjct: 181 LWGLVVCHHTSPQFVPFPLRYACEFLIQVFGVQINKEVELAAQVREKHILQIQTMLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PV I+TQ+PNVMDLVKCDGAALY++ K WLLGVTPTEEQI+ IAEWLL+YH G+TG
Sbjct: 241 LRDAPVAIITQSPNVMDLVKCDGAALYFKNKTWLLGVTPTEEQIRGIAEWLLKYHSGNTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGYPGA LGDAVCG+AAV ITS+DFLFWFRSHTAKEIKWGGAKHD KD
Sbjct: 301 LSTDSLMEAGYPGASGLGDAVCGMAAVSITSRDFLFWFRSHTAKEIKWGGAKHDPDDKDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
RKMHPRSSFKAFLEVVK RS+PWEDVEMDAI
Sbjct: 361 LRKMHPRSSFKAFLEVVKWRSMPWEDVEMDAI 392
>gi|21069979|gb|AAM34148.1| phytochrome C [Byrsonima crassifolia]
Length = 392
Score = 715 bits (1846), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/392 (86%), Positives = 364/392 (92%), Gaps = 1/392 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAA+AISRLQSLPSGNISLLCDVLV EV DLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAARAISRLQSLPSGNISLLCDVLVKEVRDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEV++ECRRPDLE YLG HYPATDIPQASRFL MKNKVRMICDCLAPPVKV
Sbjct: 61 VYKFHEDEHGEVISECRRPDLEAYLGLHYPATDIPQASRFLFMKNKVRMICDCLAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ-GRK 356
IQD++L QPLSLCGSTLR+PHGCHA+YM NMG+IASLVMSVTINE +D +D DQ+ K
Sbjct: 121 IQDERLLQPLSLCGSTLRSPHGCHAQYMANMGTIASLVMSVTINEDDDMMDMDQQHMAGK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQ+NKEVEL+AQ+REKHILRTQT+LCDML
Sbjct: 181 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQINKEVELAAQVREKHILRTQTLLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PV I+TQ+PNVMDLVKC+GAALYYR K WLLGVTPTE QI+DIAEWLLEYH G+TG
Sbjct: 241 LRDAPVAIITQSPNVMDLVKCNGAALYYRKKFWLLGVTPTEAQIRDIAEWLLEYHSGNTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGYPGA LG AVCG+AAVKITS+DFLFWFRSHTAKEIKWGGAKHD KD
Sbjct: 301 LSTDSLMEAGYPGASDLGHAVCGMAAVKITSRDFLFWFRSHTAKEIKWGGAKHDPDDKDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
GRKMHPRSSFKAFLEVVK RSLPWED+EMDAI
Sbjct: 361 GRKMHPRSSFKAFLEVVKWRSLPWEDMEMDAI 392
>gi|89330116|emb|CAJ80970.1| phytochrome A [Rhinanthus freynii]
Length = 614
Score = 715 bits (1846), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/525 (64%), Positives = 412/525 (78%), Gaps = 8/525 (1%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ +ID EPV P +VP+TAAGAL+SYKLA+KAI+R Q+L G+ L
Sbjct: 1 SGKPFYAIIHRVTASFIIDFEPVKPHEVPMTAAGALQSYKLASKAIARSQALSGGSTQRL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
C+ +V EV +LTGYDRVM YKFHED+HGEV+ E +P LEPY+G HYPATDIPQA+RFL
Sbjct: 61 CETMVQEVFELTGYDRVMTYKFHEDDHGEVLTEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDC A V+VIQD+ L L+LCGSTLRAPH CH +YMENM SIASLVMSV
Sbjct: 121 MKNKVRMICDCRANHVRVIQDENLPMDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 340 INEAEDELDNDQ-----EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEV 394
+NE +E D+ ++ ++LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKE+
Sbjct: 181 VNEGNEEAAPDETPQQLDKRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEI 240
Query: 395 ELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVT 454
E+ Q+ EK+ILRTQT+LCDMLLRD+P+GIV+Q+PNVMDLVKCDG+ L ++ + + LG+T
Sbjct: 241 EMENQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGSILLHKNQKYRLGIT 300
Query: 455 PTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWF 514
P++ QI+DI WL EYHR STGLSTDSL +AG+PGALALGD VCG+AAV+IT +D+LFWF
Sbjct: 301 PSDFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDVVCGMAAVRITDRDWLFWF 360
Query: 515 RSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLI 574
RSHTA EI+WGGAKH+ G +D GRKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLI
Sbjct: 361 RSHTASEIRWGGAKHELGERDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLI 420
Query: 575 LRGSLQDEVAEDSKM---IVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASG 631
LR + E+ E + + + +I+ + EL +T+EMVRLIETA+VPI AV G
Sbjct: 421 LRNASSKEMEERKDLEGVEIQARLNELQIDGVQELEAVTSEMVRLIETASVPIFAVGVDG 480
Query: 632 NVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
VNGWN+K A+LTGL VD+AIG + LV S + V ML A
Sbjct: 481 LVNGWNTKIADLTGLPVDKAIGLHFLSLVEESSAEAVSKMLELAL 525
>gi|20530207|gb|AAM27035.1| phytochrome C [Mascagnia sepium]
Length = 392
Score = 715 bits (1846), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/392 (85%), Positives = 361/392 (92%), Gaps = 1/392 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLV EV DLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVKEVRDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVV+ECR DLE YLG HYPATDIPQASRFL MKNKVRMICDCLAPPVKV
Sbjct: 61 VYKFHEDEHGEVVSECRGSDLESYLGLHYPATDIPQASRFLFMKNKVRMICDCLAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ-GRK 356
IQD++L QPLSLCGSTLR+PHGCHA+YM NMG+IASLVMSVT+NE +D +D DQ Q RK
Sbjct: 121 IQDERLPQPLSLCGSTLRSPHGCHAQYMTNMGTIASLVMSVTVNEDDDMVDGDQPQMTRK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQ+NKEVEL+AQ+ EKHIL+ QT+LCDML
Sbjct: 181 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQINKEVELAAQVGEKHILQIQTMLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PV I+TQ+PNVMDLVKCDGAALY++ K WLLGVTPTEEQI+DIAEWLLEYH G+TG
Sbjct: 241 LRDAPVAIITQSPNVMDLVKCDGAALYFKNKTWLLGVTPTEEQIRDIAEWLLEYHSGNTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGYPGA ALGDAVCG+AAV ITS DFLFWFRSHTAKEIKWGGAKHD KD
Sbjct: 301 LSTDSLMEAGYPGASALGDAVCGMAAVSITSGDFLFWFRSHTAKEIKWGGAKHDPDDKDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
GRKMHPRSSFKAFLEVVK RS+ WED+EMDAI
Sbjct: 361 GRKMHPRSSFKAFLEVVKWRSMSWEDIEMDAI 392
>gi|89331099|emb|CAJ80916.1| phytochrome A [Euphrasia collina]
Length = 621
Score = 715 bits (1846), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/525 (64%), Positives = 410/525 (78%), Gaps = 8/525 (1%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ L+ID EPV P +VP+TAAGAL+SYKLA+KAISR QSLPSG++ L
Sbjct: 1 SGKPFYAIIHRVTASLIIDFEPVKPHEVPMTAAGALQSYKLASKAISRFQSLPSGSMERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
C+ +V EV +LTGYDRVM+YKFHED+HGEV+ E +P LEPY+G HYPATD+PQA+RFL
Sbjct: 61 CETMVQEVFELTGYDRVMIYKFHEDDHGEVLTEITKPGLEPYVGLHYPATDVPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDC A V+VIQD L L+LCGSTLRAPH CH +YMENM SIASLVMSV
Sbjct: 121 MKNKVRMICDCRANHVRVIQDVNLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 340 INEAEDELDNDQ-----EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEV 394
+NE +E D ++ ++LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKE+
Sbjct: 181 VNEGNEEAGPDNSSQHLDKRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEL 240
Query: 395 ELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVT 454
EL Q+ EK+ILRTQT+LCDMLLRD+P+GIV+Q+PNVMDLVKCDGA L ++ + LG+T
Sbjct: 241 ELENQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAILLHKNQKHRLGIT 300
Query: 455 PTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWF 514
P++ QI+DI WL EY STGLSTDSL +AG+PGAL+LGD VCG+AAVKIT +D+LFWF
Sbjct: 301 PSDFQIRDIVSWLDEYRHDSTGLSTDSLYDAGFPGALSLGDNVCGMAAVKITDRDWLFWF 360
Query: 515 RSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLI 574
RSHTA EI+WGG+KH+ G +D RKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLI
Sbjct: 361 RSHTASEIRWGGSKHEQGERDDSRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLI 420
Query: 575 LRGSLQDEVAEDSKM---IVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASG 631
LR + E+ E + + + +I+ + EL +T+EMVRLIETA+VPI AV G
Sbjct: 421 LRNASSKEMGERKDLESVEIQARLNELQIDGVQELEAVTSEMVRLIETASVPIFAVGVDG 480
Query: 632 NVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
VNGWN+K A LTGL VD+AIG + LV S + V ML A
Sbjct: 481 LVNGWNTKIANLTGLPVDKAIGVHFLSLVEESSAEAVSKMLELAL 525
>gi|89331055|emb|CAJ80894.1| phytochrome A [Castilleja crista-galli]
Length = 609
Score = 715 bits (1846), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/525 (65%), Positives = 414/525 (78%), Gaps = 11/525 (2%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ ++ID EPV P +VP+TAAGAL+SYKLAAKAI+RLQ+LP+G++ L
Sbjct: 1 SGKPFYAIIHRVTGSMIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALPNGSMERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
CD +V EV +LTGYDRVM+YKFH+D+HGEV++E +P L+PY+G HYPATDIPQA+RFL
Sbjct: 61 CDTMVQEVFELTGYDRVMIYKFHDDDHGEVLSEITKPGLDPYVGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
+KNKVRMICDC A VKVIQD L L+LCGS LRAPH CH +YMENM SIASLVMSV
Sbjct: 121 IKNKVRMICDCRANHVKVIQDDNLPFDLTLCGSNLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 340 INEA-EDELDNDQ--EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVEL 396
+NE ED D+ ++ ++LWGLVVCH+TSPRF+PFPLRYACEFL QVF + VNKE+EL
Sbjct: 181 VNEGNEDGPDSSSHPDKKKQLWGLVVCHNTSPRFIPFPLRYACEFLAQVFAIHVNKEIEL 240
Query: 397 SAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPT 456
Q+ EK+ILRTQT+LCDMLLRD+P+GIV+Q+PNVMDLVKCDGA L ++ K + LG+TP+
Sbjct: 241 ENQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAILIHKTKKYRLGMTPS 300
Query: 457 EEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRS 516
+ QI+DI WL EYHR STGLSTDSL +AG+PGALALGDAVCG+AAV+IT D+LFWFRS
Sbjct: 301 DFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITDTDWLFWFRS 360
Query: 517 HTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILR 576
HTA I+WGGAKH+ KD GRKMHPRSSFKAFL+VVK RSLPW+D EMDAIHSLQLILR
Sbjct: 361 HTASAIRWGGAKHEPDDKDDGRKMHPRSSFKAFLDVVKTRSLPWKDFEMDAIHSLQLILR 420
Query: 577 GSLQDEVAEDSKMIVNVPSVDDRIEKID-----ELRIITNEMVRLIETAAVPILAVDASG 631
S E K V + R+ + EL +T+EMVRLIETA+VPI AVD G
Sbjct: 421 NSSNKEA---EKRDVEGKEIHARLNDLQLDGKKELEAVTSEMVRLIETASVPIFAVDVDG 477
Query: 632 NVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
+VNGWN+K A+LTGL VD+AIG + LV S + V ML A
Sbjct: 478 HVNGWNTKIADLTGLPVDKAIGRHFLALVEDSSAEAVNKMLELAL 522
>gi|40647513|gb|AAR88470.1| phytochrome C [Philgamia glabrifolia]
Length = 392
Score = 715 bits (1846), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/392 (84%), Positives = 363/392 (92%), Gaps = 1/392 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGNIS+LCDVLV EV DLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNISVLCDVLVKEVRDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVV+ECRR DLE YLG HYPATDIPQASRFL MKNKVRMICDCLAPPVKV
Sbjct: 61 VYKFHEDEHGEVVSECRRSDLESYLGLHYPATDIPQASRFLFMKNKVRMICDCLAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ-GRK 356
IQD++L QPLSLCGSTLR+PHGCH++YM NMG+IASLVMSVTINE +D +D DQ+Q RK
Sbjct: 121 IQDERLPQPLSLCGSTLRSPHGCHSQYMTNMGTIASLVMSVTINEDDDTMDGDQQQMTRK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQ+NKEVEL+AQ+REKHIL+ QT+LCDML
Sbjct: 181 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQINKEVELAAQVREKHILQIQTMLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PV I+TQ+PNVMDLV+ DG ALY++ K WLLGVTPTEEQI+DIAEWLL+YH G+TG
Sbjct: 241 LRDAPVAIITQSPNVMDLVESDGTALYFKNKTWLLGVTPTEEQIRDIAEWLLQYHSGNTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGYPGA ALGD+VCG+AAV ITS+DFLFWFRSHTAKEIKWGGAKHD KD
Sbjct: 301 LSTDSLMEAGYPGASALGDSVCGMAAVSITSRDFLFWFRSHTAKEIKWGGAKHDPDDKDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
RKMHPRSSFKAFLEVVK RS+PWED+EMDAI
Sbjct: 361 LRKMHPRSSFKAFLEVVKWRSMPWEDIEMDAI 392
>gi|406685411|gb|AFS51146.1| phytochrome P, partial [Taiwania cryptomerioides]
Length = 509
Score = 715 bits (1846), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/482 (70%), Positives = 398/482 (82%), Gaps = 2/482 (0%)
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S +LA +A SRLQ++P+G+I LLCD +V EV +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 21 SQRLAVRATSRLQAVPNGDIGLLCDTVVEEVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 80
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PV+VIQ ++L QPL L GSTLRA
Sbjct: 81 DLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRASPVRVIQAEELKQPLCLVGSTLRA 140
Query: 317 PHGCHARYMENMGSIASLVMSVTIN-EAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPL 375
PHGCHA+YM NMGSIASLVM+V +N DE KLWGLVVCHHTSPR V FPL
Sbjct: 141 PHGCHAQYMANMGSIASLVMAVIVNGNGNDEEGGSGRSSVKLWGLVVCHHTSPRAVSFPL 200
Query: 376 RYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLV 435
R ACEFL+Q FG Q+N E++L+AQL E +ILRTQT+LCDMLLRD+P+GI TQ+P++MDLV
Sbjct: 201 RSACEFLMQTFGPQINMELQLAAQLTENNILRTQTLLCDMLLRDAPIGIATQSPSIMDLV 260
Query: 436 KCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGD 495
KCDGAALYY GK WLLGVTPTE QIKDIA+WLLEYH STGLSTDSL +AGYPGA +LGD
Sbjct: 261 KCDGAALYYGGKFWLLGVTPTEAQIKDIADWLLEYHVDSTGLSTDSLADAGYPGAASLGD 320
Query: 496 AVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQ 555
AVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+
Sbjct: 321 AVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKR 380
Query: 556 RSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVR 615
RSLPWE+VEMDAIHSLQLILRGS QD D+K +V+ D +++ IDEL + +EMVR
Sbjct: 381 RSLPWENVEMDAIHSLQLILRGSFQDIDDSDTKTMVHSRLNDLKLQGIDELSSVASEMVR 440
Query: 616 LIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSS 674
LIETA PILA+D++G VNGWN+K AELTGL V +A+G +LV DLV +S++ V+ ML
Sbjct: 441 LIETATAPILAIDSAGIVNGWNAKVAELTGLPVGEAMGKSLVHDLVFEESMETVEKMLYH 500
Query: 675 AF 676
A
Sbjct: 501 AL 502
>gi|21069999|gb|AAM34158.1| phytochrome C [Janusia anisandra]
Length = 392
Score = 715 bits (1846), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/392 (84%), Positives = 362/392 (92%), Gaps = 1/392 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLV EV DLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVKEVRDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVV+ECRR DLE YLG HYPATDIPQASRFL MKNKVRMICDCLAPPVKV
Sbjct: 61 VYKFHEDEHGEVVSECRRSDLESYLGLHYPATDIPQASRFLFMKNKVRMICDCLAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ-GRK 356
IQD++L QPLSLCGSTLR+PHGCHA+YM NMG+IASLVMSVT+NE +D +D DQ+Q RK
Sbjct: 121 IQDERLPQPLSLCGSTLRSPHGCHAQYMTNMGTIASLVMSVTVNEDDDTMDGDQQQMARK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHH+SP+FVPFPLRYACEFLIQVFGVQ+NKEVEL+AQ+REKHIL+ QT+LCDML
Sbjct: 181 LWGLVVCHHSSPQFVPFPLRYACEFLIQVFGVQINKEVELAAQVREKHILQIQTMLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PV I+TQ+PNVMDLVKCDGAALY++ K W LGVTPTEEQI+ IAEWLL+YH G+TG
Sbjct: 241 LRDAPVAIITQSPNVMDLVKCDGAALYFKNKTWFLGVTPTEEQIRGIAEWLLKYHSGNTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGYPGA LGDAVCG+AAV ITS+DFLFWFRSHTAKEIKWGGAKHD KD
Sbjct: 301 LSTDSLMEAGYPGASGLGDAVCGMAAVSITSRDFLFWFRSHTAKEIKWGGAKHDPDDKDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
RKMHPRSSFKAFLEVVK RS+PWEDVEMDAI
Sbjct: 361 LRKMHPRSSFKAFLEVVKWRSVPWEDVEMDAI 392
>gi|21070071|gb|AAM34194.1| phytochrome C [Burdachia sphaerocarpa]
Length = 392
Score = 715 bits (1845), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/392 (84%), Positives = 362/392 (92%), Gaps = 1/392 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLV EV DLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVKEVRDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFH+DEHGEVV+ECRR D+E YLG HYPATDIPQASRFL MKNKVRMICDCLAPPVKV
Sbjct: 61 VYKFHDDEHGEVVSECRRSDMESYLGLHYPATDIPQASRFLFMKNKVRMICDCLAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ-GRK 356
IQD++L QPLSLCGSTLR+PHGCHA+YM NMG+IASL+MSVTINE +D +D D++Q RK
Sbjct: 121 IQDERLPQPLSLCGSTLRSPHGCHAQYMVNMGAIASLIMSVTINEDDDTIDGDEQQMARK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQ+ KEVEL+AQ+REKHILR QT+LCDML
Sbjct: 181 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQITKEVELAAQVREKHILRIQTLLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PV I+TQ+PNVMDLVKCDGAALYY+ K WLLGVTPTE QI+DIAEW +EYH G+TG
Sbjct: 241 LRDAPVAIITQSPNVMDLVKCDGAALYYKKKFWLLGVTPTEAQIRDIAEWPVEYHSGNTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGY GA +LGDAVCG+AAV ITS+DFLFWFRSHTAKEIKWGGAKHD KD
Sbjct: 301 LSTDSLMEAGYSGASSLGDAVCGMAAVSITSRDFLFWFRSHTAKEIKWGGAKHDPADKDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
GRK+HPRSSFKAFLEVVK RSLPWED+EMDAI
Sbjct: 361 GRKLHPRSSFKAFLEVVKWRSLPWEDMEMDAI 392
>gi|89330098|emb|CAJ80961.1| phytochrome A [Pedicularis gyrorhyncha]
Length = 612
Score = 715 bits (1845), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/528 (65%), Positives = 415/528 (78%), Gaps = 14/528 (2%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ L++D EPV P DVP+TAAGAL+SYKLAAKAI+RLQ+L SG++ L
Sbjct: 1 SGKPFYAIVHRVTGSLIVDFEPVKPHDVPMTAAGALQSYKLAAKAITRLQALSSGSLERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
CD + EV +LTGYDRVM+YKFHED+HGEV++E +P LEPY+G HYPATDIPQA+RFL
Sbjct: 61 CDTMAQEVFELTGYDRVMIYKFHEDDHGEVLSEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDC A V+VIQD L L+LCGSTLRAPH CH +YMEN SIASLVMSV
Sbjct: 121 MKNKVRMICDCRANHVRVIQDDNLHFDLTLCGSTLRAPHSCHLQYMENTNSIASLVMSVV 180
Query: 340 INEAEDE------LDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKE 393
INE ++ + ++ ++LWGLVVCH+TSPRFVPFPLRYACEFL+QVF + VNKE
Sbjct: 181 INEGNEDGPESSSSSSHPDKKKRLWGLVVCHNTSPRFVPFPLRYACEFLVQVFAIHVNKE 240
Query: 394 VELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGV 453
+EL Q EK+ILRTQT+LCD+LLRD+P+GIV+++PNVMDLVKC+GA L ++ K + LG
Sbjct: 241 IELENQTLEKNILRTQTLLCDLLLRDAPLGIVSRSPNVMDLVKCNGAILIHKTKKYRLGT 300
Query: 454 TPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFW 513
TP++ QI+DI WL EYHR STGLSTDSL +AG+PGALALGDAVCG+AAV+IT KD+LFW
Sbjct: 301 TPSDFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITDKDWLFW 360
Query: 514 FRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQL 573
FRSHTA EI+WGGAKH+ KD GRKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQL
Sbjct: 361 FRSHTASEIRWGGAKHEPDEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQL 420
Query: 574 ILRGSLQDEVAEDSKMIVNVPSVDDR-----IEKIDELRIITNEMVRLIETAAVPILAVD 628
ILR + E AE S VN + R ++ + EL +T+EMVRLIETA+VPI AV
Sbjct: 421 ILRNASNKE-AEASD--VNGKEIHARLNVLQLDGMQELDAVTSEMVRLIETASVPIFAVG 477
Query: 629 ASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
A G VNGWN+K A+LTGL VD A G+ V LV S + VK ML A
Sbjct: 478 ADGLVNGWNTKIADLTGLPVDTATGSHFVSLVDDSSAEAVKKMLELAL 525
>gi|89331031|emb|CAJ80882.1| phytochrome A [Aptosimum pumilum]
Length = 580
Score = 715 bits (1845), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/495 (69%), Positives = 405/495 (81%), Gaps = 4/495 (0%)
Query: 184 PDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHE 243
P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM+YKFH+
Sbjct: 1 PYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMIYKFHD 60
Query: 244 DEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKL 303
D+HGEV E +P L+PY+G HYPATDIPQA+RFL+MKNKVRMICDC A VKVIQD+KL
Sbjct: 61 DDHGEVFTEITKPGLDPYVGLHYPATDIPQAARFLLMKNKVRMICDCRANHVKVIQDEKL 120
Query: 304 DQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVC 363
L+LCGSTLRAPH CH +YMENM SIASLVMSV +NE DE +D Q ++LWGLVVC
Sbjct: 121 PFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVVVNEG-DEEGSDSSQRKRLWGLVVC 179
Query: 364 HHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVG 423
HHT+PRFVPFPLRYACEFL+QVF + VNKE+EL Q+ EK+ILRTQT+LCD+LLRD+P+G
Sbjct: 180 HHTTPRFVPFPLRYACEFLVQVFTIHVNKELELEKQMLEKNILRTQTLLCDLLLRDAPLG 239
Query: 424 IVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLV 483
IV+Q+PNVMDLVKCDGAAL Y+ K LG+TPT+ QI+DI WL EYHR STGLSTDSL
Sbjct: 240 IVSQSPNVMDLVKCDGAALLYKNKKHKLGLTPTDFQIRDIVSWLDEYHRDSTGLSTDSLY 299
Query: 484 EAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPR 543
+AG+PGALALGDAVCG+AAV+IT KD+L WFRSHTA EI+WGGAKH+ G KD GRKMHPR
Sbjct: 300 DAGFPGALALGDAVCGMAAVRITDKDWLLWFRSHTAAEIRWGGAKHEPGEKDDGRKMHPR 359
Query: 544 SSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQ--DEVAEDSKMIVNVPSVDDRIE 601
SSF AFLEVVK RSLPW+ EMDAIHSLQLILR + + D D+K I N + D R++
Sbjct: 360 SSFNAFLEVVKTRSLPWKGYEMDAIHSLQLILRNAFKEADATESDTKAIHNRLN-DLRMD 418
Query: 602 KIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVA 661
+ EL +T+EMVRLIETA+VPILAVD G VNGWN+K A+LTGL V++AIG +DLV
Sbjct: 419 SMQELEAVTSEMVRLIETASVPILAVDVDGLVNGWNTKIADLTGLGVEEAIGRHFLDLVE 478
Query: 662 GDSVDVVKNMLSSAF 676
S D VK ML A
Sbjct: 479 DSSADAVKKMLELAI 493
>gi|89331159|emb|CAJ80946.1| phytochrome A [Orobanche californica]
Length = 608
Score = 714 bits (1844), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/526 (65%), Positives = 413/526 (78%), Gaps = 14/526 (2%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ L+ID EPVNP +VP+TAAGAL+SYKLAAKAI+RLQ+LPSG++ L
Sbjct: 1 SGKPFYAIIHRVTGSLIIDFEPVNPHEVPMTAAGALQSYKLAAKAITRLQALPSGSVKRL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
CD +V EV +LTGYDRVMVYKFH+D+HGEV +E +P LEPY+G HYPATDIPQA+RFL
Sbjct: 61 CDTMVQEVFELTGYDRVMVYKFHDDDHGEVFSEITKPFLEPYVGLHYPATDIPQATRFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDC A VKV+QD L L+LCGSTLRAPH CH +YMENM SIASLVMSV
Sbjct: 121 MKNKVRMICDCQANHVKVVQDDNLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 340 INEAEDELDNDQEQG----RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVE 395
+NE DE D G +LWGLVVCH+TSPRFVPFPLRYACEFL QVF V V KE+E
Sbjct: 181 VNEG-DEDGPDSSSGPNKRERLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAVHVTKELE 239
Query: 396 LSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTP 455
QL EK+ILRTQT+LCD+LLR++P+GIV+ +PNVMDLV+CDGA L ++ + LG+TP
Sbjct: 240 WENQLLEKNILRTQTLLCDLLLRNTPLGIVSGSPNVMDLVRCDGAVLLHKNTKYRLGLTP 299
Query: 456 TEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFR 515
T+ QI+DI WL EYHR STGLSTDSL +AG+PGALALG+AVCG+ A ++T KD+LFWFR
Sbjct: 300 TDFQIQDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGNAVCGMTAARVTDKDWLFWFR 359
Query: 516 SHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLIL 575
SHTA E++W GAKH+ G KD GRKMHPRSSFKAFLEVVK RSLPW D EMDAIHSLQLIL
Sbjct: 360 SHTAGEVRWSGAKHEPGEKDDGRKMHPRSSFKAFLEVVKTRSLPWRDYEMDAIHSLQLIL 419
Query: 576 RGSLQ--DEVAEDSKMI---VNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDAS 630
R + + DE A + + I +NV +D + E+ +T+EMVRLIETA+VPI AVD
Sbjct: 420 RNASRENDEKALEGREIQARLNVLQID----GVKEIEAVTSEMVRLIETASVPIFAVDLD 475
Query: 631 GNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
G VNGWN+K A+LTGL VD+AIG+ + LV S D V ML A
Sbjct: 476 GLVNGWNTKIADLTGLGVDEAIGSHFLALVEDSSADTVSKMLELAL 521
>gi|89331103|emb|CAJ80918.1| phytochrome A [Euphrasia stricta]
Length = 618
Score = 714 bits (1844), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/525 (65%), Positives = 411/525 (78%), Gaps = 9/525 (1%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ L+ID EPV P +VP+TAAGAL+SYKLA+KAISRLQSLPSG++ L
Sbjct: 1 SGKPFYAIIHRVTASLIIDFEPVKPHEVPMTAAGALQSYKLASKAISRLQSLPSGSMERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
C+ +V EV +LTGYDRVM+YKFHED+HGEV+ E +P LEPY+G HYPATDIPQA+RFL
Sbjct: 61 CETMVQEVFELTGYDRVMIYKFHEDDHGEVLTEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDC A V+VIQD L L+LCGSTLRAPH CH +YMENM SIASLVMSV
Sbjct: 121 MKNKVRMICDCRANHVRVIQDVNLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 340 INEAEDELDNDQ-----EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEV 394
+NE +E D ++ ++LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKE+
Sbjct: 181 VNEGNEEAGPDDSSQHLDKRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEL 240
Query: 395 ELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVT 454
E Q+ EK+ILRTQT+LCDMLLRD+P+GIV+Q+PNVMDLVKCDGA L ++ + LG+T
Sbjct: 241 E-ENQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAILLHKNQKHRLGIT 299
Query: 455 PTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWF 514
P + QI+DI WL EYHR S GLSTDSL +AG+PGALA GD VCG+AAV+IT +D+LFWF
Sbjct: 300 PRDFQIRDIVSWLDEYHRDSRGLSTDSLYDAGFPGALAFGDVVCGMAAVRITDRDWLFWF 359
Query: 515 RSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLI 574
RSHTA EI+WGGAKH+ G +D GRKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLI
Sbjct: 360 RSHTASEIRWGGAKHEQGERDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLI 419
Query: 575 LRGSLQDEVAEDSKM---IVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASG 631
LR + E+ E + + + +I+ + EL +T+EMVRLIETA+VPI AV G
Sbjct: 420 LRNASSKEMEERKDLEGVEIQARLNELQIDGVQELEAVTSEMVRLIETASVPIFAVGVDG 479
Query: 632 NVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
VNGWN+K A+LTGL VD+AIG + LV S + V ML A
Sbjct: 480 LVNGWNTKIADLTGLPVDKAIGVHFLSLVEESSAEAVSKMLELAL 524
>gi|21070003|gb|AAM34160.1| phytochrome C [Janusia linearis]
Length = 392
Score = 714 bits (1843), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/392 (84%), Positives = 363/392 (92%), Gaps = 1/392 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLV EV DLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVKEVRDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVV+ECRR DLE +LG HYPATDIPQASRFL MKNKVRMICDCLAPPVKV
Sbjct: 61 VYKFHEDEHGEVVSECRRSDLESHLGLHYPATDIPQASRFLFMKNKVRMICDCLAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ-GRK 356
IQD++L QPLSLCGSTLR+PHGCHA+YM NMG+IASLVMSVT+NE +D +D DQ+Q RK
Sbjct: 121 IQDERLPQPLSLCGSTLRSPHGCHAQYMTNMGTIASLVMSVTVNEDDDTMDGDQQQMTRK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTSP+FVPFPLRYACEFLIQVFGVQ+NKEVEL+AQ+REKHIL+ QT+LCDML
Sbjct: 181 LWGLVVCHHTSPQFVPFPLRYACEFLIQVFGVQINKEVELAAQVREKHILQIQTMLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PV I+TQ+PNVMDLVKCDGAALY++ K WLLGVTPTEEQI+ IAEWLL+YH G+TG
Sbjct: 241 LRDAPVAIITQSPNVMDLVKCDGAALYFKNKTWLLGVTPTEEQIRGIAEWLLKYHSGNTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGYPGA LGDAVCG+AAV ITS+DFLFWFRSHTAKEIKWGGAKHD KD
Sbjct: 301 LSTDSLMEAGYPGASGLGDAVCGMAAVSITSRDFLFWFRSHTAKEIKWGGAKHDPDDKDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
RKMHPRSSFKAFLEVVK RS+PWED+EMDAI
Sbjct: 361 LRKMHPRSSFKAFLEVVKWRSMPWEDMEMDAI 392
>gi|39753815|gb|AAR30455.1| PHYC [Bergia texana]
Length = 390
Score = 714 bits (1843), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/391 (85%), Positives = 359/391 (91%), Gaps = 1/391 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGNISL CDVLV EVSDLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNISL-CDVLVKEVSDLTGYDRVM 59
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEV+AEC RPDLEPYLG HYPATDIPQASRFL MKNKVRMICDC+APPVKV
Sbjct: 60 VYKFHEDEHGEVIAECHRPDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCMAPPVKV 119
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKL 357
IQDK+L QPLSLC STLR+PHGCHA YM NMGSIASLV+SVTIN+ D+++ D+ GRKL
Sbjct: 120 IQDKRLTQPLSLCRSTLRSPHGCHAEYMANMGSIASLVLSVTINDEVDKIEGDKLLGRKL 179
Query: 358 WGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLL 417
WGLVVCHH SPRF+PFPLRYACEFLIQVFGVQ+NKEV L+AQ REKHILRTQ+VLCDMLL
Sbjct: 180 WGLVVCHHASPRFIPFPLRYACEFLIQVFGVQINKEVALAAQTREKHILRTQSVLCDMLL 239
Query: 418 RDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGL 477
RD+PV I+TQ+PNVMDLVKCDGAALYYR K WLLGVTP+E QI+DIA+WLLE H GSTGL
Sbjct: 240 RDAPVAIITQSPNVMDLVKCDGAALYYRKKFWLLGVTPSEAQIRDIADWLLECHSGSTGL 299
Query: 478 STDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGG 537
STDSL+EAG+PGA LGDAVCG+AAVKITSKDFLFWFRSHTAKEIKWGGAKHD KD G
Sbjct: 300 STDSLMEAGFPGASVLGDAVCGMAAVKITSKDFLFWFRSHTAKEIKWGGAKHDPDDKDDG 359
Query: 538 RKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
RKMHPRSS +AFLEVV+ RSLPWEDVEMDAI
Sbjct: 360 RKMHPRSSLRAFLEVVRWRSLPWEDVEMDAI 390
>gi|51320413|gb|AAU00357.1| phytochrome [Berberidopsis corallina]
Length = 371
Score = 714 bits (1843), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/371 (89%), Positives = 352/371 (94%)
Query: 191 AAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVV 250
AAGALKSYKLAAKAISRLQSLPSG ISLLCDVLV EVSDLTGYDRVMVYKFH+DEHGEVV
Sbjct: 1 AAGALKSYKLAAKAISRLQSLPSGTISLLCDVLVQEVSDLTGYDRVMVYKFHDDEHGEVV 60
Query: 251 AECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLC 310
AECRRP+LEPYLG HYPATDIPQASRFL MKNKVRMICDCLAPPVKVIQDK+L QPLSLC
Sbjct: 61 AECRRPELEPYLGLHYPATDIPQASRFLFMKNKVRMICDCLAPPVKVIQDKRLAQPLSLC 120
Query: 311 GSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRF 370
GSTLR+PH CHA+YM NMGSIASLVMSVTINE +DE+++DQ++GRKLWGLVVCHHTSPRF
Sbjct: 121 GSTLRSPHACHAQYMANMGSIASLVMSVTINEEDDEMESDQQKGRKLWGLVVCHHTSPRF 180
Query: 371 VPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPN 430
VPFPLRYACEFLIQVFGVQVNKEVEL+AQLREKHILRTQTVLCDMLLRD+PVGIVTQ+PN
Sbjct: 181 VPFPLRYACEFLIQVFGVQVNKEVELAAQLREKHILRTQTVLCDMLLRDAPVGIVTQSPN 240
Query: 431 VMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGA 490
VMDLVKCDGAALYYR K WLLGV PTE QI+DIAEWLLEYH GS GLSTDSL+EAGYPGA
Sbjct: 241 VMDLVKCDGAALYYRNKFWLLGVIPTEAQIRDIAEWLLEYHGGSRGLSTDSLMEAGYPGA 300
Query: 491 LALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFL 550
L LGDAVCG+AA++ITSKDFLFWFRSHTAKEIKWGGAKHD KD GRKMHPRSSFKAFL
Sbjct: 301 LVLGDAVCGMAAIRITSKDFLFWFRSHTAKEIKWGGAKHDPDDKDDGRKMHPRSSFKAFL 360
Query: 551 EVVKQRSLPWE 561
EVVK+RSLPWE
Sbjct: 361 EVVKRRSLPWE 371
>gi|21070015|gb|AAM34166.1| phytochrome C [Peixotoa glabra]
Length = 392
Score = 714 bits (1843), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/392 (84%), Positives = 361/392 (92%), Gaps = 1/392 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLV EV DLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVKEVRDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVV+ECRR DLE YLG HYPATDIPQASRFL MKNKVRMICDCLAPPV+V
Sbjct: 61 VYKFHEDEHGEVVSECRRSDLESYLGLHYPATDIPQASRFLFMKNKVRMICDCLAPPVQV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ-GRK 356
IQD++L QPLSLCGSTLR+PHGCHA+YM NMG+IASLVMSVT+NE +D +D DQ+Q RK
Sbjct: 121 IQDERLPQPLSLCGSTLRSPHGCHAQYMTNMGTIASLVMSVTVNEDDDTMDGDQQQMTRK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQ+ KEVEL+AQ+R+ H L+ QT+LCDML
Sbjct: 181 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQITKEVELAAQVRKNHTLQIQTMLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PV I+TQ+PNVMDLVKCDGAALY++ K WLLGVTPTEEQI+DIAEWLL+YH G+TG
Sbjct: 241 LRDAPVAIITQSPNVMDLVKCDGAALYFKNKTWLLGVTPTEEQIRDIAEWLLKYHSGNTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGYPGA LGDAVCG+AAV ITS+DFLFWFRSHTAKEIKWGGAKHD KD
Sbjct: 301 LSTDSLMEAGYPGASTLGDAVCGMAAVSITSRDFLFWFRSHTAKEIKWGGAKHDPDDKDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
RKMHPRSSFKAFLEVVK RS+PWEDVEMDAI
Sbjct: 361 LRKMHPRSSFKAFLEVVKWRSMPWEDVEMDAI 392
>gi|20530199|gb|AAM27031.1| phytochrome C [Madagasikaria andersonii]
Length = 392
Score = 714 bits (1842), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/392 (84%), Positives = 360/392 (91%), Gaps = 1/392 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLV EV DLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVKEVRDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVV+ECRR DLE YLG HYPATDIPQASRFL MKNKVRMICDC+APPVKV
Sbjct: 61 VYKFHEDEHGEVVSECRRSDLESYLGLHYPATDIPQASRFLFMKNKVRMICDCVAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ-GRK 356
IQD++L QPLSLC STLR+PHGCHA+YM NMG +ASLVMSVT+NE +D +D DQ Q RK
Sbjct: 121 IQDERLPQPLSLCASTLRSPHGCHAQYMTNMGIVASLVMSVTVNEEDDMVDGDQPQMARK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS RFVPFPLRYACEFLIQVFGVQ+NKEVEL+AQ+REKHIL+ QT+LCDML
Sbjct: 181 LWGLVVCHHTSTRFVPFPLRYACEFLIQVFGVQINKEVELAAQVREKHILQIQTMLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PV I+TQ+PNVMDLVKCDGAALY++ K WLLGVTPTEEQI+ IAEWLLEYH G+TG
Sbjct: 241 LRDAPVAIITQSPNVMDLVKCDGAALYFKNKTWLLGVTPTEEQIRGIAEWLLEYHSGNTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGYPGA ALGDAVCG+AAV I S+DFL WFRSHTAKEIKWGGAKHD G KD
Sbjct: 301 LSTDSLMEAGYPGASALGDAVCGMAAVSINSRDFLLWFRSHTAKEIKWGGAKHDPGDKDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
GRKMHPRSSFKAFLEVVK RS+PWED+EMDAI
Sbjct: 361 GRKMHPRSSFKAFLEVVKWRSMPWEDMEMDAI 392
>gi|363547897|gb|AEW26988.1| phytochrome P [Cryptomeria japonica]
Length = 484
Score = 714 bits (1842), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/481 (71%), Positives = 399/481 (82%), Gaps = 12/481 (2%)
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S +LA +A SRLQ++P+G+I LLCD +V EV +LTGYDRVMVYKFHEDEHGEVVAE RR
Sbjct: 13 SQRLAVRATSRLQAVPNGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDEHGEVVAEIRRS 72
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL M+N+VR+ICDC A PV VIQ ++L QPL L GSTLRA
Sbjct: 73 DLEPYLGLHYPATDIPQASRFLFMQNRVRVICDCRANPVGVIQVEELKQPLCLVGSTLRA 132
Query: 317 PHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLR 376
PHGCHA+YM NMGSIASLVM+V +N KLWGLVVCHHTSPR VPFPLR
Sbjct: 133 PHGCHAQYMANMGSIASLVMAVIVN-----------GNVKLWGLVVCHHTSPRAVPFPLR 181
Query: 377 YACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVK 436
ACEFL+Q FG+Q+N E++L+AQL E +ILRTQT+LCDMLLRD+P+GIVTQ+P++MDLVK
Sbjct: 182 SACEFLMQTFGLQINMEMQLAAQLTENNILRTQTLLCDMLLRDAPIGIVTQSPSIMDLVK 241
Query: 437 CDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDA 496
CDGAALYY GK WLLGVTPT QIKDIA+WLLEYH STGLSTDSL +AGYPGA +LGDA
Sbjct: 242 CDGAALYYGGKFWLLGVTPTGAQIKDIADWLLEYHGDSTGLSTDSLADAGYPGAASLGDA 301
Query: 497 VCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQR 556
VCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSSFKAFLEVVK+R
Sbjct: 302 VCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPRSSFKAFLEVVKRR 361
Query: 557 SLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRL 616
SLPWE+VEMDAIHSLQLILRGS QD ++K +V+V D +++ IDEL + NEMVRL
Sbjct: 362 SLPWENVEMDAIHSLQLILRGSFQDIDDSETKTMVHVQLHDLKLQGIDELSSVANEMVRL 421
Query: 617 IETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSSA 675
IETA PILAVD++G VNGWN+KAAELTGL V +A+G +LV DLV +S++ V+ ML A
Sbjct: 422 IETATAPILAVDSAGIVNGWNAKAAELTGLPVGEAMGKSLVHDLVFEESMETVEKMLYHA 481
Query: 676 F 676
Sbjct: 482 L 482
>gi|224576254|gb|ACN56820.1| phytochrome A [Chorispora tenella]
Length = 578
Score = 714 bits (1842), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/506 (67%), Positives = 409/506 (80%), Gaps = 7/506 (1%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFHED+HGEVV++ + LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHEDDHGEVVSKVTKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD----NDQEQ 353
QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D Q Q
Sbjct: 121 FQDEKLSFDLTLCGSTLRAPHSCHLQYMANMESIASLVMAVVVNEEDGEGDAPDSTAQPQ 180
Query: 354 GRK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
RK LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+L
Sbjct: 181 KRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG+TP+E Q+++IA WL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGITPSEYQLQEIASWLCEYHT 300
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AG+P ALALGD+VCG+AAVKITSKD +FWFRSHTA E++WGGAKHD
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDSVCGMAAVKITSKDMIFWFRSHTAGEVRWGGAKHDPE 360
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAED--SKMI 590
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D + D + +
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESTDVNNTNV 420
Query: 591 VNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQ 650
+ D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+
Sbjct: 421 IYSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDE 480
Query: 651 AIGTALVDLVAGDSVDVVKNMLSSAF 676
AIG L+ LV SV++VK+ML +A
Sbjct: 481 AIGKHLLTLVEESSVEIVKSMLQNAL 506
>gi|21069997|gb|AAM34157.1| phytochrome C [Janusia linearifolia]
Length = 392
Score = 714 bits (1842), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/392 (84%), Positives = 361/392 (92%), Gaps = 1/392 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLV EV DLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVREVRDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVV+ECRR DLE YLG HYPATDIPQASRFL MKNKVRMICDCLAPPVKV
Sbjct: 61 VYKFHEDEHGEVVSECRRSDLESYLGLHYPATDIPQASRFLFMKNKVRMICDCLAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ-GRK 356
IQ ++L QPLSLCGSTLR+PHGCHA+YM NM +IASLVMSVT+NE ++ +D DQ+Q RK
Sbjct: 121 IQHERLPQPLSLCGSTLRSPHGCHAQYMTNMATIASLVMSVTVNEDDETMDGDQQQMTRK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQ+NKEVEL+AQ+REKHIL+ QT+LCDML
Sbjct: 181 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQINKEVELAAQVREKHILQIQTMLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PV I+TQ+PNVMDLVKCDGAALY++ K WLLGVTPTEEQI+ IAEWLLEYH G+TG
Sbjct: 241 LRDAPVAIITQSPNVMDLVKCDGAALYFKNKTWLLGVTPTEEQIRGIAEWLLEYHSGNTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGYPGA LGDAVCG+AAV ITS+DFLFWFRSHTAKEIKWGGAKHD KD
Sbjct: 301 LSTDSLMEAGYPGASGLGDAVCGMAAVSITSRDFLFWFRSHTAKEIKWGGAKHDPDDKDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
RKMHPRSSFKAFLEVVK RS+PWED+EMDAI
Sbjct: 361 LRKMHPRSSFKAFLEVVKWRSMPWEDMEMDAI 392
>gi|40647521|gb|AAR88474.1| phytochrome C [Verrucularia glaucophylla]
Length = 392
Score = 714 bits (1842), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/392 (85%), Positives = 362/392 (92%), Gaps = 1/392 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAA+AISRLQSLPSGNISLLCDVLV EV DLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAARAISRLQSLPSGNISLLCDVLVKEVRDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVV+EC RPDL+ YLG HYPATDIPQASRFL MKNKVRMICDCLAPPVKV
Sbjct: 61 VYKFHEDEHGEVVSECCRPDLDAYLGLHYPATDIPQASRFLFMKNKVRMICDCLAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ-EQGRK 356
IQD++L QPLSLCGSTLR+PHGCHA+YM NMG+IASLVMSVTINE ++ +D++Q RK
Sbjct: 121 IQDQRLPQPLSLCGSTLRSPHGCHAQYMANMGTIASLVMSVTINEDDNIVDDNQLRMERK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHT PRFVPFPLRYACEFLIQVFGVQ+NKEVEL+AQ+ EKHILRTQT+LCDML
Sbjct: 181 LWGLVVCHHTGPRFVPFPLRYACEFLIQVFGVQINKEVELAAQVTEKHILRTQTLLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PV I+TQ+PNVMDLVKCDGAALYYR K WLLGVTPTE QI+DIAEWLLEYH G+TG
Sbjct: 241 LRDAPVAIITQSPNVMDLVKCDGAALYYRKKFWLLGVTPTEAQIRDIAEWLLEYHSGNTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGYPGA LGDAVCG+A+VKI+S+DFLFWFRSHTAKEIKW GAKHD G KD
Sbjct: 301 LSTDSLMEAGYPGASVLGDAVCGMASVKISSRDFLFWFRSHTAKEIKWSGAKHDPGDKDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
RKMHPRSSFKAFLEVVK RSLPWED+EMDAI
Sbjct: 361 IRKMHPRSSFKAFLEVVKWRSLPWEDMEMDAI 392
>gi|6715225|gb|AAF26325.1|AF190079_1 phytochrome C, partial [Degeneria vitiensis]
Length = 393
Score = 713 bits (1841), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/393 (85%), Positives = 359/393 (91%), Gaps = 2/393 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLV EVS+LTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVREVSELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFHEDEHGEV+AE RR DLEPYLG HYPATDIPQASRFL MKNKVRMICDC APPVKV
Sbjct: 61 AYKFHEDEHGEVIAESRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCSAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ-GRK 356
IQDK+L QPLSLCGSTLRAPHGCH +YM NMGSI+SLVMSVTINE +D++ ++Q+Q GRK
Sbjct: 121 IQDKRLAQPLSLCGSTLRAPHGCHTQYMANMGSISSLVMSVTINEDDDDMLSEQQQKGRK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTSPRF+PFPLRYACEFLIQVFG+Q+NKEVEL+AQ+REKHILR QTVLCDML
Sbjct: 181 LWGLVVCHHTSPRFIPFPLRYACEFLIQVFGIQLNKEVELAAQMREKHILRMQTVLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PVGI+TQ+PNVMDLV CDGAALYYR + WLLG TPTE QI+DIA WL+EYH G+TG
Sbjct: 241 LRDTPVGIITQSPNVMDLVNCDGAALYYRNQFWLLGTTPTEAQIRDIAGWLVEYHDGTTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGK-D 535
LSTDSL EAGYP A LGD VCG+A VKITSKDFLFWFRSHT KEIKWGGAKHD K D
Sbjct: 301 LSTDSLTEAGYPSAADLGDDVCGMATVKITSKDFLFWFRSHTGKEIKWGGAKHDPVDKDD 360
Query: 536 GGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI
Sbjct: 361 DGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 393
>gi|51320415|gb|AAU00358.1| phytochrome [Carallia brachiata]
Length = 391
Score = 713 bits (1841), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/391 (85%), Positives = 359/391 (91%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPS N+SLLC+VLV EV DLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSRNMSLLCEVLVKEVRDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VY+FH+DEHGEVVAE R DLEPYLG H+PATDIPQASRFL MKNKVRMICDCLAPPVKV
Sbjct: 61 VYRFHDDEHGEVVAESCRTDLEPYLGLHFPATDIPQASRFLFMKNKVRMICDCLAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKL 357
+QD++L QPLSLCGSTLRAPHGCHA+YM NMGSIASLVMSVTINE + E+D+ Q+ GRKL
Sbjct: 121 VQDRRLAQPLSLCGSTLRAPHGCHAQYMANMGSIASLVMSVTINEDDAEMDSGQQNGRKL 180
Query: 358 WGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLL 417
WGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQ+NKEVEL+ Q+REKHIL+TQTVLCDMLL
Sbjct: 181 WGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQINKEVELATQMREKHILQTQTVLCDMLL 240
Query: 418 RDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGL 477
RD+PV IVTQ+PNVMDLVKCDGA LYYR K WLLG+TPTE QI DIAEWLLE H G+TGL
Sbjct: 241 RDAPVAIVTQSPNVMDLVKCDGAVLYYRKKTWLLGITPTEAQISDIAEWLLECHSGTTGL 300
Query: 478 STDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGG 537
STDSL+EAGYPGA LGDAVCG+AAVKIT+KDFLFWFRSHTAKEIKWGGAKHD KD G
Sbjct: 301 STDSLMEAGYPGASDLGDAVCGMAAVKITAKDFLFWFRSHTAKEIKWGGAKHDPHNKDDG 360
Query: 538 RKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
+ MHPRSSFKAFLEVVK RSLPWED+EMDAI
Sbjct: 361 KMMHPRSSFKAFLEVVKWRSLPWEDMEMDAI 391
>gi|21070087|gb|AAM34202.1| phytochrome C [Mionandra camareoides]
Length = 392
Score = 713 bits (1841), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/392 (85%), Positives = 362/392 (92%), Gaps = 1/392 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLV EV DLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVKEVRDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFHEDEHGEVV+ECRR DLE YLG HYPATDIPQASRFL MKNKVRMICDCLAPPVKV
Sbjct: 61 AYKFHEDEHGEVVSECRRSDLESYLGLHYPATDIPQASRFLFMKNKVRMICDCLAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ-GRK 356
IQD++L QPLSLCGSTLR+PHGCHA+YM NMG+IASL MSVT+NE +D +D DQ+Q RK
Sbjct: 121 IQDERLPQPLSLCGSTLRSPHGCHAQYMTNMGTIASLGMSVTVNEDDDTMDGDQQQMTRK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQ+NKEVEL+AQ+REKHIL+ QT+LCDML
Sbjct: 181 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQINKEVELAAQVREKHILQIQTMLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PV I+TQ+PNVMDLVKCDGAALY++ K WLLGVTPTEEQI+DIAEWLL+YH G+TG
Sbjct: 241 LRDAPVAIITQSPNVMDLVKCDGAALYFKNKTWLLGVTPTEEQIRDIAEWLLKYHCGNTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGYPGA ALGDAVCG+AAV ITS+DFLFWFRSHTAKEIKWGGAKHD KD
Sbjct: 301 LSTDSLMEAGYPGASALGDAVCGMAAVSITSRDFLFWFRSHTAKEIKWGGAKHDPDDKDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
RKMHP SSFKAFLEVVK RS+PW+DVEMDAI
Sbjct: 361 LRKMHPGSSFKAFLEVVKWRSMPWKDVEMDAI 392
>gi|21069935|gb|AAM34126.1| phytochrome C [Diacidia ferruginea]
Length = 392
Score = 713 bits (1841), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/392 (84%), Positives = 361/392 (92%), Gaps = 1/392 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAA+AISRLQSLPSGNISLLCDVLV EV DLT YDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAARAISRLQSLPSGNISLLCDVLVKEVRDLTDYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEV++EC RPD+E YLG HYPATDIPQASRFL MKNKVRMICDCLA PVKV
Sbjct: 61 VYKFHEDEHGEVISECCRPDMEAYLGLHYPATDIPQASRFLFMKNKVRMICDCLATPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDND-QEQGRK 356
IQD++L QPLSLCGSTLR+PHGCHA+YM NMG+IASLVMSVTINE +D +D D Q + RK
Sbjct: 121 IQDERLPQPLSLCGSTLRSPHGCHAQYMANMGAIASLVMSVTINEDDDMMDGDRQHRARK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTSPRF+PFPLRYACEFLIQVFGVQ+NKEVEL+AQ+REKHILRTQT+LCDML
Sbjct: 181 LWGLVVCHHTSPRFLPFPLRYACEFLIQVFGVQINKEVELAAQVREKHILRTQTLLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PV I+TQ+PNVMDLVKC+GAALYY+ K WL+G+TPTE QI+DIAEWLLEYH G+TG
Sbjct: 241 LRDAPVAIITQSPNVMDLVKCNGAALYYKKKFWLVGLTPTEAQIRDIAEWLLEYHNGNTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGYPGA LGD VCG+A VKITS+DFLFWFRSHTAKEIKWGGAKHD KD
Sbjct: 301 LSTDSLMEAGYPGASELGDTVCGMAVVKITSRDFLFWFRSHTAKEIKWGGAKHDPDDKDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
GRKMHPRSSFKAFLEVVK RSLPWED+EMDAI
Sbjct: 361 GRKMHPRSSFKAFLEVVKWRSLPWEDIEMDAI 392
>gi|20530205|gb|AAM27034.1| phytochrome C [Microsteira sp. Davis et al. 38-01]
Length = 392
Score = 713 bits (1841), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/392 (84%), Positives = 359/392 (91%), Gaps = 1/392 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLV EV DLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVKEVRDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVV+ECRR DLE YLG HYPATDIPQASRFL MKNKVRMICDC+APPVKV
Sbjct: 61 VYKFHEDEHGEVVSECRRSDLESYLGLHYPATDIPQASRFLFMKNKVRMICDCVAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ-GRK 356
IQD++L QPLSLC STLR+PHGCHA+YM NMG IASLVMSVT+NE +D +D DQ Q RK
Sbjct: 121 IQDERLPQPLSLCASTLRSPHGCHAQYMTNMGIIASLVMSVTVNEEDDMVDGDQLQMARK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS RFVPFPLRYACEFLIQVFGVQ+NKEVEL+AQ+REKHIL+ QT+LCDML
Sbjct: 181 LWGLVVCHHTSTRFVPFPLRYACEFLIQVFGVQINKEVELAAQVREKHILQIQTMLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PV I+TQ+PN MDLVKCDGAALY++ K WLLGVTPTEEQI+DIAEWLLEYH G+TG
Sbjct: 241 LRDAPVAIITQSPNAMDLVKCDGAALYFKNKTWLLGVTPTEEQIRDIAEWLLEYHSGNTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGYPGA ALGD VCG+AAV ITS+DFL WFR+HTAKEIKWGGAKHD KD
Sbjct: 301 LSTDSLMEAGYPGASALGDTVCGMAAVSITSRDFLLWFRAHTAKEIKWGGAKHDPDDKDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
GRKMHPRSSFKAFLEVVK RS+PWEDVEMDAI
Sbjct: 361 GRKMHPRSSFKAFLEVVKWRSMPWEDVEMDAI 392
>gi|21070001|gb|AAM34159.1| phytochrome C [Janusia mediterranea]
Length = 392
Score = 713 bits (1840), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/392 (84%), Positives = 361/392 (92%), Gaps = 1/392 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLV EV DLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVKEVRDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVV+ECRR DLE YLG HYPATDIPQASRFL MKNKVRMICDCLAP VKV
Sbjct: 61 VYKFHEDEHGEVVSECRRSDLESYLGLHYPATDIPQASRFLFMKNKVRMICDCLAPSVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ-GRK 356
IQD++L QPLSLCGSTLR+PHGCHA+YM NMG+IASLVMSVT+NE +D +D DQ+Q RK
Sbjct: 121 IQDERLPQPLSLCGSTLRSPHGCHAQYMTNMGTIASLVMSVTVNEDDDTMDGDQQQMARK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTSP+FVPFPLRYACEFLIQVFGVQ+ K+VEL+AQ+REKHIL+ QT+LCDML
Sbjct: 181 LWGLVVCHHTSPQFVPFPLRYACEFLIQVFGVQITKKVELAAQVREKHILQIQTMLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PV I+TQ+PNVMDLVKCDGAALY++ K W LGVTPTEEQI+DIAEWLL+YH G+TG
Sbjct: 241 LRDAPVAIITQSPNVMDLVKCDGAALYFKSKTWFLGVTPTEEQIRDIAEWLLKYHSGNTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGYPGA LGDAVCG+AAV ITS+DFLFWFRSHTAKEIKWGGAKHD KD
Sbjct: 301 LSTDSLMEAGYPGASGLGDAVCGMAAVSITSRDFLFWFRSHTAKEIKWGGAKHDPDDKDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
RKMHPRSSFKAFLEVVK RS+PWED+EMDAI
Sbjct: 361 LRKMHPRSSFKAFLEVVKWRSMPWEDMEMDAI 392
>gi|345424394|gb|AEN85301.1| phytochrome A, partial [Erucaria erucarioides]
gi|345424398|gb|AEN85303.1| phytochrome A, partial [Erucaria erucarioides]
Length = 598
Score = 713 bits (1840), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/504 (67%), Positives = 410/504 (81%), Gaps = 5/504 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG--- 354
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D G
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEEDGPDSTGPQK 180
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
++LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GI++Q+PN+MDLVKCDGAAL Y+ K+W LGVTP++ +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGVTPSDYHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P AL+LGD+VCG+AAV+I+SKD +FWFRSHTA E+KWGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAAEVKWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
KD R+MHPRSSFKAFLEVVK+RSLPW+D EMDAIHSLQLILR + +D E + + I++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKRRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTTIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAF 676
G L+ LV SV++VK ML +A
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENAL 504
>gi|6715245|gb|AAF26345.1|AF190099_1 phytochrome C, partial [Nymphaea alba]
Length = 407
Score = 713 bits (1840), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/407 (82%), Positives = 362/407 (88%), Gaps = 1/407 (0%)
Query: 163 PFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDV 222
PFY ILHRIDVGLVIDLEPVNP DVPVTAAGALKSYKLAAKAISRLQ+LPSGNI LLCDV
Sbjct: 1 PFYGILHRIDVGLVIDLEPVNPTDVPVTAAGALKSYKLAAKAISRLQALPSGNIGLLCDV 60
Query: 223 LVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKN 282
LV EVS+LTGYDRVM YKFHED HGEV+AEC++PDLEPYLG HYPATDIPQASRFL MKN
Sbjct: 61 LVREVSELTGYDRVMAYKFHEDHHGEVIAECKKPDLEPYLGLHYPATDIPQASRFLFMKN 120
Query: 283 KVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINE 342
KVRMICDC AP VKVIQDK+L+ + LCGSTLR+PHGCHA+YM NMGSIASLVMSV I
Sbjct: 121 KVRMICDCTAPSVKVIQDKQLEAAVELCGSTLRSPHGCHAQYMVNMGSIASLVMSVVIMN 180
Query: 343 AEDELDNDQEQ-GRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLR 401
++E ND Q G KLWGLVVCHHTSPRF+PFPLRYACEFLIQVF VQ+NKEVEL+AQLR
Sbjct: 181 HDEEPANDNPQKGSKLWGLVVCHHTSPRFIPFPLRYACEFLIQVFAVQLNKEVELAAQLR 240
Query: 402 EKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIK 461
EKHILRTQTVLCDMLLRD+PVGIVT +PNVMDLVKCDGAALYY + WLLG TPTE Q++
Sbjct: 241 EKHILRTQTVLCDMLLRDAPVGIVTPSPNVMDLVKCDGAALYYGKQFWLLGTTPTETQVR 300
Query: 462 DIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKE 521
DIA WL E H GSTGLSTDSL+EAGY GA+ALGDA CG+AAVKIT +DFLFWFRSHTAKE
Sbjct: 301 DIAGWLYECHGGSTGLSTDSLMEAGYSGAVALGDAACGMAAVKITYRDFLFWFRSHTAKE 360
Query: 522 IKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
IKWGGAKHD+ KD G++MHPRSSFK FLEVVK RS PWE+ EMDAI
Sbjct: 361 IKWGGAKHDTVDKDAGKRMHPRSSFKTFLEVVKHRSHPWENAEMDAI 407
>gi|6715227|gb|AAF26327.1|AF190081_1 phytochrome C, partial [Drimys winteri]
Length = 394
Score = 713 bits (1840), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/394 (85%), Positives = 361/394 (91%), Gaps = 3/394 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAIS+LQ LPSGNISLLCDVLV EVS+LTGYDRVM
Sbjct: 1 DLEPVNPVDVPVTAAGALKSYKLAAKAISKLQYLPSGNISLLCDVLVREVSELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH DEHGEV+AECRR D+EPYLG HYPATDIPQASRFL MKNKVRMICDC A PVKV
Sbjct: 61 AYKFHGDEHGEVIAECRRSDIEPYLGLHYPATDIPQASRFLFMKNKVRMICDCTARPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQE--QGR 355
IQDKKL QPLSLCGS LRAPHGCHA+YM NMGSIASLVMSVTI+E +DE +++ +GR
Sbjct: 121 IQDKKLAQPLSLCGSALRAPHGCHAQYMANMGSIASLVMSVTISEDDDEASTEEQRQKGR 180
Query: 356 KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDM 415
KLWGLVVCHH +PRFVPFPLRYACEFLIQVFG+Q+NKEVEL AQLREK++LRTQT+LCDM
Sbjct: 181 KLWGLVVCHHVTPRFVPFPLRYACEFLIQVFGIQLNKEVELEAQLREKNMLRTQTMLCDM 240
Query: 416 LLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGST 475
LLRD+PVGIVTQ+PNVMDLVKCDGAALYYR + WLLG+TPTE QI+DIAEWLLEYH +T
Sbjct: 241 LLRDAPVGIVTQSPNVMDLVKCDGAALYYRNQFWLLGITPTEAQIRDIAEWLLEYHNSTT 300
Query: 476 GLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKD 535
GLSTDSL+EA YPGA LGDAVCG+AAVKIT KDFLFWFRSHTAKEIKWGGAKHD G KD
Sbjct: 301 GLSTDSLMEAAYPGASILGDAVCGMAAVKITCKDFLFWFRSHTAKEIKWGGAKHDPGDKD 360
Query: 536 G-GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
G GRKMHPRSSFKAFL+VVKQRSLPWEDVEMDAI
Sbjct: 361 GDGRKMHPRSSFKAFLDVVKQRSLPWEDVEMDAI 394
>gi|21069923|gb|AAM34120.1| phytochrome C [Blepharandra heteropetala]
Length = 392
Score = 713 bits (1840), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/392 (85%), Positives = 359/392 (91%), Gaps = 1/392 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAA+AISRLQSLPSGNISLLCDVLV EV DLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAARAISRLQSLPSGNISLLCDVLVKEVRDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEV++ECRRPDLE YLG HYPATDIPQASRFL MKNKVRMICDCLAP VKV
Sbjct: 61 VYKFHEDEHGEVISECRRPDLEAYLGLHYPATDIPQASRFLFMKNKVRMICDCLAPAVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ-GRK 356
IQD++L Q LSLCGSTLR+PHGCHA+YM NMG+IASLVMSV INE D +D DQ+ RK
Sbjct: 121 IQDERLPQALSLCGSTLRSPHGCHAQYMANMGTIASLVMSVIINEDNDMMDGDQQHIARK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQ+NKEVEL+AQ+REKHILRTQT+LCDML
Sbjct: 181 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQINKEVELAAQVREKHILRTQTLLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PV I+TQ+PNVMDLVKCDGAALYYR K WLLGVTPTE QI+DIAEWLLEYH G+ G
Sbjct: 241 LRDAPVAIITQSPNVMDLVKCDGAALYYRKKFWLLGVTPTEVQIRDIAEWLLEYHGGNAG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGYPGA LG+AVCG+AAV+ITS+DFLFWFRSHTAKEIKWGGAKH KD
Sbjct: 301 LSTDSLMEAGYPGASDLGNAVCGMAAVRITSRDFLFWFRSHTAKEIKWGGAKHHPNDKDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
RKMHPRSSFKAFLEVVK RSLPWED+EMDAI
Sbjct: 361 VRKMHPRSSFKAFLEVVKWRSLPWEDIEMDAI 392
>gi|13383412|gb|AAK20969.1| phytochrome A [Houttuynia cordata]
Length = 578
Score = 713 bits (1840), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/527 (64%), Positives = 415/527 (78%), Gaps = 10/527 (1%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ L+ID EPV P +VP+TAAGAL+SYKLAAKAISRLQSLPSG++ L
Sbjct: 1 SGKPFYAIVHRVTGSLIIDFEPVKPFEVPMTAAGALQSYKLAAKAISRLQSLPSGSMERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
D +V EV +LTGYDRVM YKFHED+HGEV++E P L+PYLG HYPATDIPQA+RFL
Sbjct: 61 IDTMVQEVFELTGYDRVMAYKFHEDDHGEVISEVTIPHLDPYLGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDC A PVKV QD KL L+LCGSTLRAPH CH +YMENMGSIASLVM+V
Sbjct: 121 MKNKVRMICDCRAKPVKVYQDDKLSFDLTLCGSTLRAPHSCHLQYMENMGSIASLVMAVV 180
Query: 340 INEAEDE-----LDNDQEQ-GR----KLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQ 389
+NE +E D+ Q+Q GR KLWGLVVCH+T PRFVPFPLRYACEFL QVF +
Sbjct: 181 VNEGGEEDRGGPADSSQQQLGRYRRKKLWGLVVCHNTRPRFVPFPLRYACEFLTQVFAIH 240
Query: 390 VNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLW 449
V+KE+EL K ILRTQT+LCDMLLRD+P+GIV QTPN+MDL+KCDGAAL+Y+ K++
Sbjct: 241 VSKELELEETNSRKEILRTQTLLCDMLLRDAPMGIVNQTPNIMDLIKCDGAALFYKDKVF 300
Query: 450 LLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKD 509
LG+ P+E I++IA+WL YH STGLSTDSL +AGYP A LGD VCG+AAVKIT D
Sbjct: 301 RLGIAPSETDIREIAQWLSAYHMDSTGLSTDSLHDAGYPKAAFLGDLVCGMAAVKITCSD 360
Query: 510 FLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIH 569
LFWFR+HTA EI+WGGAKHD +D G++MHPRSSF+AFL+VVK RSLPW+D EMD IH
Sbjct: 361 MLFWFRTHTAAEIRWGGAKHDHSDRDDGKRMHPRSSFRAFLDVVKTRSLPWKDYEMDGIH 420
Query: 570 SLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDA 629
SLQLILR S+++ DS +++ D ++++++EL +T E+VRLIETA VPILAVD
Sbjct: 421 SLQLILRTSVKEPEQVDSNKVIHAQLGDLKLDEMNELHAVTTEVVRLIETATVPILAVDV 480
Query: 630 SGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
G +NGWN+K +ELTG++++Q + L+ LV S++VV+ ML A
Sbjct: 481 XGLINGWNAKISELTGMSLEQVMXKHLLTLVEDCSINVVRRMLCLAL 527
>gi|21069931|gb|AAM34124.1| phytochrome C [Caucanthus auriculatus]
Length = 392
Score = 713 bits (1840), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/392 (84%), Positives = 360/392 (91%), Gaps = 1/392 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLV EV DLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVKEVRDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVV+EC R DLE YLG HYPATDIPQASRFL MKNKVRMICDC+APPVKV
Sbjct: 61 VYKFHEDEHGEVVSECHRSDLESYLGLHYPATDIPQASRFLFMKNKVRMICDCVAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ-GRK 356
IQ+++L QPLSLCGSTLR+PHGCHA+YM NMG IASLVMSVT+NE +D +D DQ Q RK
Sbjct: 121 IQEERLPQPLSLCGSTLRSPHGCHAQYMTNMGIIASLVMSVTVNEEDDMVDGDQPQMARK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS RFVPFPLRYACEFLIQVFGVQ+NKEVEL+AQ+REKHIL+ QT+LCDML
Sbjct: 181 LWGLVVCHHTSTRFVPFPLRYACEFLIQVFGVQINKEVELAAQVREKHILQIQTMLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PV I+TQ+PNVMDLVKCDGAALY++ K WLLGVTPTEEQI+DI EWLLEYH G+TG
Sbjct: 241 LRDAPVAIITQSPNVMDLVKCDGAALYFKNKTWLLGVTPTEEQIRDITEWLLEYHSGNTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGYPGA ALGDAVCG+AAV ITS+DFL WFRSHTAKEIKWGGAKHD KD
Sbjct: 301 LSTDSLMEAGYPGASALGDAVCGMAAVSITSRDFLLWFRSHTAKEIKWGGAKHDPDDKDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
GRKMHPRSSFKAFLEVVK RS+PWED+EMDAI
Sbjct: 361 GRKMHPRSSFKAFLEVVKWRSMPWEDMEMDAI 392
>gi|224576330|gb|ACN56858.1| phytochrome A [Matthiola farinosa]
Length = 577
Score = 712 bits (1839), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/505 (67%), Positives = 408/505 (80%), Gaps = 6/505 (1%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFHED+HGEVV+E +P +EPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 DYKFHEDDHGEVVSEVIKPGMEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD----NDQEQ 353
QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D Q Q
Sbjct: 121 FQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQ 180
Query: 354 GRK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
RK LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+L
Sbjct: 181 KRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDML+RD+P+GIVTQ+PN+MDLVKCDGAAL Y+ K+W LG TP+E Q++DIA WL EYH
Sbjct: 241 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKDKVWKLGTTPSEYQLQDIATWLCEYHT 300
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AG+P AL+LGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 301 DSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPE 360
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIV 591
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E + + I+
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKII 420
Query: 592 NVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
+ D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+A
Sbjct: 421 HSKLNDLKIDGIRELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 652 IGTALVDLVAGDSVDVVKNMLSSAF 676
I L+ LV SV++VK ML +A
Sbjct: 481 IEKHLLTLVEDSSVEIVKRMLENAL 505
>gi|224576392|gb|ACN56889.1| phytochrome A [Sisymbriopsis mollipila]
Length = 578
Score = 712 bits (1839), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/506 (67%), Positives = 409/506 (80%), Gaps = 7/506 (1%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALRSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFHED+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDND-----QE 352
QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E + Q
Sbjct: 121 FQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGGDAPDSTAQP 180
Query: 353 QGRK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTV 411
Q RK LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+
Sbjct: 181 QKRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTL 240
Query: 412 LCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYH 471
LCDML+RD+P+GIVTQ+PNVMDLVKCDGAAL Y+ K+W LG+TP++ Q+++IA WL EYH
Sbjct: 241 LCDMLMRDAPLGIVTQSPNVMDLVKCDGAALLYKDKIWKLGITPSDYQLQEIASWLCEYH 300
Query: 472 RGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDS 531
STGLSTDSL +AG+P AL+LGD+VCG+AAV+I++KD +FWFRSHTA E++WGGAKHD
Sbjct: 301 TDSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISTKDMIFWFRSHTAGEVRWGGAKHDP 360
Query: 532 GGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMI 590
KD R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E + + I
Sbjct: 361 DDKDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKI 420
Query: 591 VNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQ 650
++ D +I+ + EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+
Sbjct: 421 IHSKLNDLKIDGMQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDE 480
Query: 651 AIGTALVDLVAGDSVDVVKNMLSSAF 676
AIG + LV SV++VK ML +A
Sbjct: 481 AIGKHFLTLVEDSSVEIVKKMLENAL 506
>gi|13383398|gb|AAK20962.1| phytochrome C [Coptis trifolia]
Length = 391
Score = 712 bits (1839), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/391 (83%), Positives = 362/391 (92%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGA+KSYKLAAKAISRLQSLPSGNI++LCDVLV EVSDLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGAMKSYKLAAKAISRLQSLPSGNIAVLCDVLVQEVSDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHED+HGEV+AECR P+LEPYLG HYPATDIPQASRFL M+NKVRMICDC A PVKV
Sbjct: 61 VYKFHEDDHGEVIAECRVPELEPYLGLHYPATDIPQASRFLFMRNKVRMICDCSAAPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKL 357
IQD KL+QPLSL GS LRAPHGCHA+YM NMGS+ASLVMSVTINE +D+++ DQ++GRKL
Sbjct: 121 IQDNKLEQPLSLGGSALRAPHGCHAQYMANMGSVASLVMSVTINENDDQMETDQQKGRKL 180
Query: 358 WGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLL 417
WGL+VCHHTSPRFVP+PLRYACEFLIQVFG+Q+NKEVEL+ Q+RE+HIL+TQTVLCDMLL
Sbjct: 181 WGLLVCHHTSPRFVPYPLRYACEFLIQVFGMQINKEVELATQVRERHILQTQTVLCDMLL 240
Query: 418 RDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGL 477
RD+P+GIVTQ+PN+MDLVKC+GAALYYR + WLLGVTPTE QI+DIAEWLL+YH STGL
Sbjct: 241 RDAPIGIVTQSPNIMDLVKCNGAALYYRSRFWLLGVTPTEAQIRDIAEWLLQYHNASTGL 300
Query: 478 STDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGG 537
STDSL+EAG+PGA LG AVCG+AA+KIT KDFLFWFRSHTAKEIKWGGAKH+ KD G
Sbjct: 301 STDSLMEAGFPGASVLGTAVCGMAAIKITLKDFLFWFRSHTAKEIKWGGAKHNPTEKDDG 360
Query: 538 RKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
KMHPRSSFKAFLEVVK RSLPWEDVEMDAI
Sbjct: 361 WKMHPRSSFKAFLEVVKHRSLPWEDVEMDAI 391
>gi|224576278|gb|ACN56832.1| phytochrome A [Euclidium syriacum]
Length = 577
Score = 712 bits (1839), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/505 (67%), Positives = 409/505 (80%), Gaps = 6/505 (1%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP++AAGAL+SYKLAAKAI+RLQ LPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMSAAGALQSYKLAAKAITRLQLLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFHED+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD----NDQEQ 353
QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + + D Q Q
Sbjct: 121 FQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGDGDAPDSTAQPQ 180
Query: 354 GRK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
RK LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+L
Sbjct: 181 KRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDML+RD+P+GIVTQ+PNVMDLVKCDGAAL Y+ K+W LG+TP++ Q+++IA WL EYH
Sbjct: 241 CDMLMRDAPLGIVTQSPNVMDLVKCDGAALLYKDKVWKLGITPSDYQLQEIATWLCEYHT 300
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AGYP AL+LGD+VCG+AAV+I++KD +FWFRSHTA E++WGGAKHD
Sbjct: 301 DSTGLSTDSLHDAGYPRALSLGDSVCGMAAVRISTKDMIFWFRSHTAGEVRWGGAKHDPE 360
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIV 591
KD R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E + + I+
Sbjct: 361 DKDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKII 420
Query: 592 NVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
+ D +I+ + EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+A
Sbjct: 421 HSKLNDLKIDGMQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 652 IGTALVDLVAGDSVDVVKNMLSSAF 676
IG L+ LV SVD+VK ML +A
Sbjct: 481 IGKHLLTLVEDSSVDIVKRMLENAL 505
>gi|345424392|gb|AEN85300.1| phytochrome A, partial [Erucaria erucarioides]
Length = 598
Score = 712 bits (1839), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/504 (67%), Positives = 409/504 (81%), Gaps = 5/504 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG--- 354
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D G
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEEDGPDSTGPQK 180
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
++LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GI++Q+PN+MDLVKCDGAAL Y+ K+W LGVTP++ +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGVTPSDYHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P AL+LGD+VCG+A V+ITSKD +FWFRSHTA E+KWGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALSLGDSVCGMATVRITSKDMIFWFRSHTAAEVKWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
KD R+MHPRSSFKAFLEVVK+RSLPW+D EMDAIHSLQLILR + +D E + + I++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKRRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTTIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAF 676
G L+ LV SV++VK ML +A
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENAL 504
>gi|257852895|gb|ACV71459.1| phytochrome C [Dapania racemosa]
Length = 382
Score = 712 bits (1839), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/382 (86%), Positives = 359/382 (93%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGN+SLLCDVLV EVSDLTGY+RVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNMSLLCDVLVKEVSDLTGYNRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVVAECRRPDLEPY+G HYPATDIPQASRFL MKNKVRMICDCLA PVKV
Sbjct: 61 VYKFHEDEHGEVVAECRRPDLEPYIGLHYPATDIPQASRFLFMKNKVRMICDCLALPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKL 357
IQ+KKL QPLSLCGSTLR+PHGCHA+YM NMGS+ASLVMSVTI+E ++E+D+DQ++GRKL
Sbjct: 121 IQNKKLAQPLSLCGSTLRSPHGCHAQYMANMGSVASLVMSVTISEDDEEMDSDQQKGRKL 180
Query: 358 WGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLL 417
WGLVVCHHTSPRFVPFPLRYACEFLIQVF VQ+NKEVE++AQLREKHIL+ QTVLCDMLL
Sbjct: 181 WGLVVCHHTSPRFVPFPLRYACEFLIQVFAVQINKEVEMAAQLREKHILQIQTVLCDMLL 240
Query: 418 RDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGL 477
RDSPVGIVT++PNVMDLVKCDGAALYYR K+WLLGVTP E QIKD+AEWLLEYH STGL
Sbjct: 241 RDSPVGIVTRSPNVMDLVKCDGAALYYRKKVWLLGVTPLEAQIKDLAEWLLEYHGASTGL 300
Query: 478 STDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGG 537
+TDSL+EA YPGA LG+AVCG+AAV+I++KDFLFWFRSHTAKEIKWGGAKHD KD G
Sbjct: 301 TTDSLMEAAYPGASVLGEAVCGMAAVRISAKDFLFWFRSHTAKEIKWGGAKHDPNNKDDG 360
Query: 538 RKMHPRSSFKAFLEVVKQRSLP 559
RKMHPRSSFKAFLEVVK RSLP
Sbjct: 361 RKMHPRSSFKAFLEVVKWRSLP 382
>gi|89331143|emb|CAJ80938.1| phytochrome A [Melampyrum pratense]
Length = 605
Score = 712 bits (1839), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/522 (64%), Positives = 413/522 (79%), Gaps = 5/522 (0%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ L+ID EPV P +VP+TAAGAL+SYKLA+K+I+RLQSLP G++ L
Sbjct: 1 SGKPFYAIIHRLTASLIIDFEPVKPHEVPMTAAGALQSYKLASKSIARLQSLPGGSMERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
C+ + EV +LTGYDRVMVYKFHED+HGEV+ E +P LEPY+G HYPATDIPQASRFL
Sbjct: 61 CETMAQEVFELTGYDRVMVYKFHEDDHGEVLTEITKPGLEPYVGLHYPATDIPQASRFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVR ICDC A V+VIQD+ L L+LCGSTLRAPH CH +YMENM SIASLVMSV
Sbjct: 121 MKNKVRTICDCRANHVRVIQDENLPVDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 340 INEAEDEL---DNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVEL 396
+NE ++ D+ ++ ++LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKE+EL
Sbjct: 181 VNEGNEDAGPDDSSLDKRQRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAINVNKELEL 240
Query: 397 SAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPT 456
Q+ EK+ILRTQT+LCDMLLRD+P+GIV+ +PNVMDLVKCDGA L ++ + LG+TP
Sbjct: 241 ENQMFEKNILRTQTLLCDMLLRDAPLGIVSHSPNVMDLVKCDGAILLHKNQKHRLGMTPN 300
Query: 457 EEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRS 516
+ Q +DI WL EYHR STGLSTDSL +AG+PGAL LGD VCG+AAV+I+ +D+LFWFRS
Sbjct: 301 DSQFRDIVSWLEEYHRDSTGLSTDSLYDAGFPGALDLGDVVCGMAAVRISDEDWLFWFRS 360
Query: 517 HTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILR 576
HTA EI+WGGA+H+S +D G+KMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQ+ILR
Sbjct: 361 HTASEIRWGGARHESCERDDGQKMHPRSSFKAFLEVVKSRSLPWKDFEMDAIHSLQIILR 420
Query: 577 GSLQDEVAEDSKMIVNVPSV--DDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVN 634
+ E E ++ V + + + +I+ + EL +T+EMVRLIETA+VPI AVD G VN
Sbjct: 421 NASSKETEERKEVGVQIQARLNELQIDGVQELEAVTSEMVRLIETASVPIFAVDVDGLVN 480
Query: 635 GWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
GWN+K A+LTGL D+AIG + LV S++ V ML A
Sbjct: 481 GWNTKIADLTGLPADKAIGMHFLSLVEESSIEAVSKMLELAL 522
>gi|89330152|emb|CAJ80988.1| phytochrome A [Tozzia alpina]
Length = 612
Score = 712 bits (1839), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/525 (65%), Positives = 417/525 (79%), Gaps = 8/525 (1%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ L++D EPV P +VP+TAAGAL+SYKLA+KAISRLQSLPSG++ L
Sbjct: 1 SGKPFYAIIHRVTASLIVDFEPVKPHEVPMTAAGALQSYKLASKAISRLQSLPSGSMGRL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
C+ + EV +LTGYDRVM+YKFHED+HGEV+ E +P LEPY+G HYPATDIPQA+RFL
Sbjct: 61 CETMAQEVFELTGYDRVMIYKFHEDDHGEVLTEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDC A V+VIQD+ L L+LCGSTLRAPH CH +YMENM SIASLVMSV
Sbjct: 121 MKNKVRMICDCRANHVRVIQDESLPLELTLCGSTLRAPHNCHLQYMENMNSIASLVMSVV 180
Query: 340 INEAEDEL---DNDQ--EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEV 394
+NE +E D+ Q ++ ++LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKE+
Sbjct: 181 VNEGNEEAGPGDSSQHPDKRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEL 240
Query: 395 ELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVT 454
EL Q +K+ILRTQT+LCDMLLRD+P+GIV+Q+PNVMDLVKCDGA L ++ + LG+T
Sbjct: 241 ELENQTLKKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAILLHKNQKHRLGIT 300
Query: 455 PTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWF 514
P++ I+DI WL EYHR STGLSTDSL +AG+PGALALGD VCG+AAV+IT +D+LFWF
Sbjct: 301 PSDFHIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDVVCGMAAVRITDRDWLFWF 360
Query: 515 RSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLI 574
RSHTA EI+WGGAK++ G K GRKMHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLI
Sbjct: 361 RSHTASEIRWGGAKNELGEKADGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLI 420
Query: 575 LRGSLQDEVA--EDSKMIVNVPSVDD-RIEKIDELRIITNEMVRLIETAAVPILAVDASG 631
LR + EV +D + + +++ +I+ + EL +T+EMVRLIETA+VPI AV G
Sbjct: 421 LRNASSKEVEGRKDLEGVEIQARLNELQIDGVQELEAVTSEMVRLIETASVPIFAVGVDG 480
Query: 632 NVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
VNGWN+K A+LTGL VD+AIG + LV S + V ML A
Sbjct: 481 LVNGWNTKIADLTGLPVDKAIGVHFLSLVEESSAEAVSKMLELAL 525
>gi|89331063|emb|CAJ80898.1| phytochrome A [Castilleja miniata]
Length = 609
Score = 712 bits (1839), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/523 (65%), Positives = 415/523 (79%), Gaps = 7/523 (1%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ ++ID EPV P +VP+TAAGAL+SYKLAAKAI+RLQ+LP+G++ L
Sbjct: 1 SGKPFYAIIHRVTGSMIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALPNGSMERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
CD +V EV +LTGYDRVM+YKFH+D+HGEV++E +P L+PY+G HYPATDIPQA+RFL
Sbjct: 61 CDTMVQEVFELTGYDRVMIYKFHDDDHGEVLSEITKPGLDPYVGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
+KNKVRMICDC A VKVIQD L L+LCGS LRAPH CH +YMENM SIASLVMSV
Sbjct: 121 IKNKVRMICDCRANHVKVIQDDNLPFDLTLCGSNLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 340 INEAEDELDNDQ---EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVEL 396
+NE ++ N ++ ++LWGLVVCH+TSPRF+PFPLRYACEFL QVF + VNKE+EL
Sbjct: 181 VNEGNEDGPNSSSHPDKKKQLWGLVVCHNTSPRFIPFPLRYACEFLAQVFAIHVNKEIEL 240
Query: 397 SAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPT 456
Q+ EK+ILRTQT+LCDMLLRD+P+GIV+Q+PNVMDLVKCDGA L ++ K + LG+TP+
Sbjct: 241 ENQMLEKNILRTQTLLCDMLLRDAPLGIVSQSPNVMDLVKCDGAILIHKTKKYRLGMTPS 300
Query: 457 EEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRS 516
+ QI+DI WL EYHR STGLSTDSL +AG+PGALALGDAVCG+AAV+IT D+LFWFRS
Sbjct: 301 DFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITDTDWLFWFRS 360
Query: 517 HTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILR 576
HTA I+WGGAKH+ KD GRKMHPRSSFKAFL+VVK RSL W+D EMDAIHSLQLILR
Sbjct: 361 HTASTIRWGGAKHEPDDKDDGRKMHPRSSFKAFLDVVKTRSLSWKDFEMDAIHSLQLILR 420
Query: 577 GSLQDEVAE---DSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNV 633
S E + + K I + D +++ EL +T+EMVRLIETA+VPI AVD G+V
Sbjct: 421 NSSSKEAEKGDVEGKEI-HARLNDLQLDGKKELEAVTSEMVRLIETASVPIFAVDVDGHV 479
Query: 634 NGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
NGWN+K A+LTGL VD+AIG + LV S + V ML A
Sbjct: 480 NGWNTKIADLTGLPVDKAIGRHFLALVEDSSAEAVNKMLELAL 522
>gi|20530193|gb|AAM27028.1| phytochrome C [Caucanthus auriculatus]
Length = 392
Score = 712 bits (1839), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/392 (84%), Positives = 360/392 (91%), Gaps = 1/392 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLV EV DLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVKEVRDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVV+EC R DLE YLG HYPATDIPQASRFL MKNKVRMICDC+APPVKV
Sbjct: 61 VYKFHEDEHGEVVSECHRSDLESYLGLHYPATDIPQASRFLFMKNKVRMICDCVAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ-GRK 356
IQ+++L QPLSLCGSTLR+PHGCHA+YM NM IASLVMSVT+NE +D +D DQ Q RK
Sbjct: 121 IQEERLPQPLSLCGSTLRSPHGCHAQYMTNMRIIASLVMSVTVNEEDDMVDGDQPQMARK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS RFVPFPLRYACEFLIQVFGVQ+NKEVEL+AQ+REKHIL+ QT+LCDML
Sbjct: 181 LWGLVVCHHTSTRFVPFPLRYACEFLIQVFGVQINKEVELAAQVREKHILQIQTMLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PV I+TQ+PNVMDLVKCDGAALY++ K WLLGVTPTEEQI+DIAEWLLEYH G+TG
Sbjct: 241 LRDAPVAIITQSPNVMDLVKCDGAALYFKNKTWLLGVTPTEEQIRDIAEWLLEYHSGNTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGYPGA ALGDAVCG+AAV ITS+DFL WFRSHTAKEIKWGGAKHD KD
Sbjct: 301 LSTDSLMEAGYPGASALGDAVCGMAAVSITSRDFLLWFRSHTAKEIKWGGAKHDPDDKDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
GRKMHPRSSFKAFLEVVK RS+PWED+EMDAI
Sbjct: 361 GRKMHPRSSFKAFLEVVKWRSMPWEDIEMDAI 392
>gi|40647461|gb|AAR88444.1| phytochrome C [Acridocarpus chevalieri]
Length = 392
Score = 712 bits (1838), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/392 (84%), Positives = 359/392 (91%), Gaps = 1/392 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGNI LLCDVLV EV DLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNIFLLCDVLVKEVRDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVV+ECRR DLE YLG HYPATDIPQASRFL MKNKVRMICDCLAPP+KV
Sbjct: 61 VYKFHEDEHGEVVSECRRSDLEAYLGLHYPATDIPQASRFLFMKNKVRMICDCLAPPIKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ-GRK 356
IQD++L QPLSL STLR+PHGCHA+YM NMG+IASLVMSVTINE +D +D +Q+Q RK
Sbjct: 121 IQDERLPQPLSLGASTLRSPHGCHAQYMANMGTIASLVMSVTINEDDDMMDGEQQQMARK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQ+NKEVEL+AQ+REKHIL+ QT+LCDML
Sbjct: 181 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQINKEVELAAQVREKHILQIQTLLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PV I+TQ+PNVMDLVKCDGAALYY+ K WLLG+TPTE QI+DI EWLLE+H G+TG
Sbjct: 241 LRDAPVAIITQSPNVMDLVKCDGAALYYKKKFWLLGITPTEAQIRDIVEWLLEFHSGNTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGYPGA LGDAVCG+AAV ITSKDFLFWFRSHTAKEIKWGGAKHD KD
Sbjct: 301 LSTDSLMEAGYPGASVLGDAVCGMAAVSITSKDFLFWFRSHTAKEIKWGGAKHDPDDKDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
GRKMHPRSSF AFLEVVK RSLPWED+EMDAI
Sbjct: 361 GRKMHPRSSFNAFLEVVKWRSLPWEDIEMDAI 392
>gi|27652111|gb|AAO11732.1| phytochrome C [Brachylophon curtisii]
Length = 384
Score = 712 bits (1838), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/384 (86%), Positives = 355/384 (92%), Gaps = 1/384 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGNIS+LCDVLV EV DLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNISMLCDVLVKEVRDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVV+ECRRPDLE YLG HYPATDIPQASRFL MKNKVRMICDCLAPPVKV
Sbjct: 61 VYKFHEDEHGEVVSECRRPDLEAYLGLHYPATDIPQASRFLFMKNKVRMICDCLAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ-GRK 356
IQD++L QPLSLCGSTLR+PHGCHA+YM NMG+IASLVMSVTINE +D +D DQ Q RK
Sbjct: 121 IQDERLPQPLSLCGSTLRSPHGCHAQYMANMGTIASLVMSVTINEDDDMMDGDQRQMARK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS RFVPFPLRYACEFLIQVFGVQ+NKEVEL+AQ+REKHILR QT+LCDML
Sbjct: 181 LWGLVVCHHTSARFVPFPLRYACEFLIQVFGVQINKEVELAAQVREKHILRIQTLLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PV I+TQ+PNVMDLVKCDGAALYY+ K WLLG+TPTE QI+DIAEWLLEYH G+TG
Sbjct: 241 LRDAPVAIITQSPNVMDLVKCDGAALYYKKKFWLLGITPTEAQIRDIAEWLLEYHNGNTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGYPGA LGDAVCG+AAV ITS+DFLFWFRSHTAKEIKWGGAKHD KD
Sbjct: 301 LSTDSLMEAGYPGASVLGDAVCGMAAVSITSRDFLFWFRSHTAKEIKWGGAKHDPDDKDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPW 560
GRKMHPRSSFKAFLEVVK RSLPW
Sbjct: 361 GRKMHPRSSFKAFLEVVKWRSLPW 384
>gi|345424414|gb|AEN85311.1| phytochrome A, partial [Erucaria microcarpa]
Length = 598
Score = 712 bits (1838), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/504 (67%), Positives = 411/504 (81%), Gaps = 5/504 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD----NDQEQ 353
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D ++
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTSPQK 180
Query: 354 GRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
++LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GI++Q+PN+MDLVKCDGAAL Y+ K+W LG+TPT+ +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPTDFHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+S+D +FWFRSHTA E++WGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
KD R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E A+ + I++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESADMNTKIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G +NGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAF 676
G L+ LV SV++VK ML SA
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLESAL 504
>gi|315377373|gb|ADU05524.1| phytochrome A [Pachycladon stellatum]
Length = 599
Score = 712 bits (1838), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/505 (66%), Positives = 413/505 (81%), Gaps = 6/505 (1%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSVERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFHED+HGEVV+E +P L+PYLG HYPATDIPQA+RFL MKNKVRMI DC A +V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLDPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD----NDQEQ 353
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D + Q Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSSTQPQ 180
Query: 354 GRK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
RK LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+L
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDML+RD+P+GIV+Q+PN+MDLVKCDGAAL+Y+ K+W LG+TP+E +++IA WL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALFYKDKIWKLGITPSEFHLQEIASWLCEYHT 300
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AG+P AL++GD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHDS
Sbjct: 301 DSTGLSTDSLHDAGFPKALSIGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDSN 360
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIV 591
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E + + ++
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDCETTDVNTKLI 420
Query: 592 NVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
+ D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL+VD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEA 480
Query: 652 IGTALVDLVAGDSVDVVKNMLSSAF 676
IG L+ LV SV++V+ ML +A
Sbjct: 481 IGKHLLILVEDSSVEIVERMLENAL 505
>gi|6715209|gb|AAF26309.1|AF190063_1 phytochrome C, partial [Amborella trichopoda]
Length = 394
Score = 712 bits (1838), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/394 (85%), Positives = 363/394 (92%), Gaps = 3/394 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAIS+LQSLPSGNI LLCDVLV EV +LTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKAISKLQSLPSGNIELLCDVLVREVRELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFHEDEHGEVVAE RR DL+PYLG HYPATDIPQASRFL +KNKVRMICDC A PVKV
Sbjct: 61 AYKFHEDEHGEVVAEYRRADLDPYLGLHYPATDIPQASRFLFLKNKVRMICDCTASPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ---EQG 354
IQDKKLD+PLSLCGSTLRAPHGCHA+YM NMGSIASLVMSVTINE +++ ++ +G
Sbjct: 121 IQDKKLDKPLSLCGSTLRAPHGCHAQYMANMGSIASLVMSVTINENDEDSSPNEPSFHKG 180
Query: 355 RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCD 414
RKLWGLVVCHHT+PRFVPFPLRYACEFL+QVFG+Q+NKEVEL+AQLREKHILRTQTVLCD
Sbjct: 181 RKLWGLVVCHHTTPRFVPFPLRYACEFLLQVFGIQLNKEVELAAQLREKHILRTQTVLCD 240
Query: 415 MLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGS 474
MLLRD+PVGIVTQ+PN+MDLVKCDGAALYY+ ++WLLG TP E QI+DI+ WLLEYH GS
Sbjct: 241 MLLRDAPVGIVTQSPNIMDLVKCDGAALYYQKQVWLLGTTPLEAQIRDISGWLLEYHCGS 300
Query: 475 TGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGK 534
TGLSTDSL+EAGYPGALALGDAVCG+AAVKITSKDFLFWFRSHTAK IKWGGAKHD +
Sbjct: 301 TGLSTDSLMEAGYPGALALGDAVCGMAAVKITSKDFLFWFRSHTAKVIKWGGAKHDPVDR 360
Query: 535 DGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
D GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI
Sbjct: 361 DDGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 394
>gi|21070005|gb|AAM34161.1| phytochrome C [Janusia californica]
Length = 392
Score = 712 bits (1838), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/392 (84%), Positives = 362/392 (92%), Gaps = 1/392 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLA+KAISRLQSLPSGNISLLCDVLV EV DLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLASKAISRLQSLPSGNISLLCDVLVKEVRDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVV+ECRR DLE YLG HYPATDIPQASRFL MKNKVRMICDCLAPPVKV
Sbjct: 61 VYKFHEDEHGEVVSECRRSDLESYLGLHYPATDIPQASRFLFMKNKVRMICDCLAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ-GRK 356
IQD++L QPLSLCGSTLR+PHGCHA+YM NMG+IASLVMSVT+NE +D +D DQ+Q RK
Sbjct: 121 IQDERLPQPLSLCGSTLRSPHGCHAQYMTNMGTIASLVMSVTVNEDDDTMDGDQQQMTRK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTSP+ VPFPLRYACEFLIQVFGVQ+NKEVEL+AQ+REKHIL+ QT+LCDML
Sbjct: 181 LWGLVVCHHTSPQSVPFPLRYACEFLIQVFGVQINKEVELAAQVREKHILQIQTMLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PV I+TQ+PNVMDLVKCDGAALY++ K WLLGVTPTEEQI+ IAEWLL+YH G+TG
Sbjct: 241 LRDAPVAIITQSPNVMDLVKCDGAALYFKNKTWLLGVTPTEEQIRGIAEWLLKYHSGNTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGYPGA LGDAVCG+AAV ITS+DFLFWFRSHTAKEIKWGGAKHD KD
Sbjct: 301 LSTDSLMEAGYPGASGLGDAVCGMAAVSITSRDFLFWFRSHTAKEIKWGGAKHDPDDKDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
RKMHPRSSFKAFLEVVK RS+PWED+EMDAI
Sbjct: 361 LRKMHPRSSFKAFLEVVKWRSMPWEDIEMDAI 392
>gi|406685337|gb|AFS51109.1| phytochrome P, partial [Chamaecyparis lawsoniana]
Length = 530
Score = 712 bits (1838), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/482 (70%), Positives = 398/482 (82%), Gaps = 2/482 (0%)
Query: 197 SYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRP 256
S +LA +A SRLQ++P+G+I LLCD +V EV +LTGYDRVMVYKFHED+HGEVVAE RR
Sbjct: 21 SQRLAVRATSRLQAVPNGDIGLLCDAVVEEVRELTGYDRVMVYKFHEDDHGEVVAEIRRS 80
Query: 257 DLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRA 316
DLEPYLG HYPATDIPQASRFL MKN+VRMICDC APPV++IQ ++LDQPL L GSTLRA
Sbjct: 81 DLEPYLGLHYPATDIPQASRFLFMKNRVRMICDCRAPPVRIIQAEELDQPLCLVGSTLRA 140
Query: 317 PHGCHARYMENMGSIASLVMSVTINE-AEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPL 375
PHG HA+YM NMGSIASL M+V +N DE + KLWGLVVCHHTSPR VPFPL
Sbjct: 141 PHGYHAQYMANMGSIASLAMAVIVNGIGNDEGGSSGRSAGKLWGLVVCHHTSPRAVPFPL 200
Query: 376 RYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLV 435
R ACEFL+Q F +Q+N E++L+AQL E +ILRTQT+LCDMLLRD+P+GIVT++P++MDLV
Sbjct: 201 RSACEFLMQTFSLQINMEMQLAAQLTENNILRTQTLLCDMLLRDAPIGIVTRSPSIMDLV 260
Query: 436 KCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGD 495
KCDGAALYY GK WLL VTPTE QIKDIA+WLLEYH STGLSTDSL +AGYPGA +LGD
Sbjct: 261 KCDGAALYYGGKFWLLEVTPTEAQIKDIADWLLEYHGDSTGLSTDSLADAGYPGAASLGD 320
Query: 496 AVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQ 555
AVCG+AA +ITSKDFLFWFRSHTA EIKWGGAKH KD GR+MHPRSSF AFLEVVK+
Sbjct: 321 AVCGMAAARITSKDFLFWFRSHTANEIKWGGAKHHPDDKDDGRRMHPRSSFXAFLEVVKR 380
Query: 556 RSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDELRIITNEMVR 615
RSLPWE+VEMDAIHSLQLILRGS QD ++K +V+ D R++ +DEL + EMVR
Sbjct: 381 RSLPWENVEMDAIHSLQLILRGSFQDIDDSENKTMVHARMSDLRLQGMDELSSVACEMVR 440
Query: 616 LIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDSVDVVKNMLSS 674
LIETA PILAVDA+G VNGWNS AAELTGL ++A+G +LV DLV +S++ V+ ML +
Sbjct: 441 LIETAHAPILAVDAAGIVNGWNSYAAELTGLPAEEAMGKSLVHDLVFDESIETVEKMLYN 500
Query: 675 AF 676
A
Sbjct: 501 AL 502
>gi|224576286|gb|ACN56836.1| phytochrome A [Farsetia aegyptia]
Length = 577
Score = 712 bits (1838), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/508 (67%), Positives = 409/508 (80%), Gaps = 6/508 (1%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDN----DQEQ 353
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE E E D Q Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEEGEGDAPDSATQPQ 180
Query: 354 GRK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
RK LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+L
Sbjct: 181 KRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDML+RD+P+GIV+Q+P++MDLVKCDGAAL Y+ K+W LG+TP+E +++IA WL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPSIMDLVKCDGAALLYKDKIWRLGITPSEFHLQEIASWLCEYHT 300
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPE 360
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIV 591
D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E + + I+
Sbjct: 361 DIDDARRMHPRSSFKAFLEVVKMRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKII 420
Query: 592 NVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
+ D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 652 IGTALVDLVAGDSVDVVKNMLSSAFLAI 679
IG L+ LV SV++VK ML A I
Sbjct: 481 IGKHLLSLVEDSSVEIVKGMLEKALEGI 508
>gi|406685285|gb|AFS51083.1| phytochrome P, partial [Taxus wallichiana var. chinensis]
Length = 543
Score = 712 bits (1838), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/492 (70%), Positives = 400/492 (81%), Gaps = 6/492 (1%)
Query: 191 AAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVV 250
G++ S +LA +A SRLQ++PSG+I LLCD +V EV +LTGYDRVMVYKFHEDEHGEVV
Sbjct: 10 GGGSVPSQRLAVRATSRLQAVPSGDIGLLCDTVVEEVRELTGYDRVMVYKFHEDEHGEVV 69
Query: 251 AECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLC 310
AE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L QPL L
Sbjct: 70 AEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQSGELKQPLCLV 129
Query: 311 GSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ-----EQGRKLWGLVVCHH 365
GSTLRAPHGCHA+YM NMGSIASLVM+V +N + D D KLWGLVVCHH
Sbjct: 130 GSTLRAPHGCHAQYMANMGSIASLVMAVIVNGNGNGNDEDGGGGSGRSSMKLWGLVVCHH 189
Query: 366 TSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIV 425
TSPR VPFPLR ACEFL+Q FG+Q+N E++L+AQL E +ILRTQT+LCDMLLRD+P+GIV
Sbjct: 190 TSPRAVPFPLRSACEFLMQTFGLQINMELQLAAQLIENNILRTQTLLCDMLLRDAPIGIV 249
Query: 426 TQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEA 485
TQ+P++MDLVKCDGAALYY G WLLGVTP E QIKDIAEWLLE H STGLSTDSL +A
Sbjct: 250 TQSPSIMDLVKCDGAALYYGGMCWLLGVTPMEAQIKDIAEWLLECHGDSTGLSTDSLADA 309
Query: 486 GYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSS 545
GYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSS
Sbjct: 310 GYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPRSS 369
Query: 546 FKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDE 605
FKAFLEVVK+RSLPWE+VEMDAIHSLQLILRGS QD D+K +V+ D +++ IDE
Sbjct: 370 FKAFLEVVKRRSLPWENVEMDAIHSLQLILRGSFQDIDDSDTKTMVHARLNDLKLQGIDE 429
Query: 606 LRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDS 664
L + +EMVRLIETA PILAVD+SG VNGWN+K ELTGL V +A+G +LV DLV +S
Sbjct: 430 LSSVASEMVRLIETATAPILAVDSSGIVNGWNAKVGELTGLPVGEAMGKSLVHDLVFDES 489
Query: 665 VDVVKNMLSSAF 676
V+ V+ ML A
Sbjct: 490 VETVEKMLYHAM 501
>gi|224576420|gb|ACN56903.1| phytochrome A [Tetracme pamirica]
Length = 577
Score = 712 bits (1838), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/505 (67%), Positives = 408/505 (80%), Gaps = 6/505 (1%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFHED+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD----NDQEQ 353
QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + D Q Q
Sbjct: 121 FQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEAGDGDAPDSTAQPQ 180
Query: 354 GRK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
RK LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+L
Sbjct: 181 KRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDML+RD+P+GIVTQ+PNVMDLVKCDGAAL Y+ K+W LG+TP++ Q+++IA WL EYH
Sbjct: 241 CDMLMRDAPLGIVTQSPNVMDLVKCDGAALLYKDKIWKLGITPSDYQLQEIASWLCEYHT 300
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AG+P AL+LGD+VCG+AAVKI++KD +FWFRSHTA E++WGGAKHD
Sbjct: 301 DSTGLSTDSLHDAGFPRALSLGDSVCGMAAVKISTKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIV 591
KD R+MHPRSSFKAFLEVV RSLPW+D EMDAIHSLQLILR + +D E + + I+
Sbjct: 361 DKDDARRMHPRSSFKAFLEVVXTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKII 420
Query: 592 NVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
+ D +I+ + EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+A
Sbjct: 421 HSKLNDLKIDGMQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 652 IGTALVDLVAGDSVDVVKNMLSSAF 676
IG L+ LV SV++VK ML +A
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLENAL 505
>gi|224576274|gb|ACN56830.1| phytochrome A [Dontostemon senilis]
Length = 578
Score = 712 bits (1838), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/506 (67%), Positives = 407/506 (80%), Gaps = 7/506 (1%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
Y+FH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYRFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD----NDQEQ 353
QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D Q Q
Sbjct: 121 FQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQ 180
Query: 354 GRK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
RK LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+L
Sbjct: 181 KRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDML+RD+P+GIV Q+PN+MDLVKCDGAAL Y+ K+W LG+TP+E Q+++IA WL EYH
Sbjct: 241 CDMLMRDAPLGIVAQSPNIMDLVKCDGAALLYKDKVWKLGITPSEYQLQEIATWLSEYHT 300
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AG+P ALALGD+VCG+AAVKITSKD +FWFRSHTA E++WGGAKHD
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDSVCGMAAVKITSKDMIFWFRSHTAGEVRWGGAKHDPE 360
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAED--SKMI 590
+D R+MHPRSSFKAFLEVVK RS+PW++ EMDAIHSLQLILR + +D D + I
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKSRSMPWKEYEMDAIHSLQLILRNAFKDGETTDVNNTNI 420
Query: 591 VNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQ 650
+ D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+
Sbjct: 421 IYSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDE 480
Query: 651 AIGTALVDLVAGDSVDVVKNMLSSAF 676
AIG L+ LV SV++VK ML +A
Sbjct: 481 AIGKHLLTLVEDSSVEIVKRMLENAL 506
>gi|21069937|gb|AAM34127.1| phytochrome C [Dinemandra ericoides]
Length = 392
Score = 712 bits (1837), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/392 (85%), Positives = 365/392 (93%), Gaps = 1/392 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGNI LLCDVLV EV DLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNIPLLCDVLVKEVRDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVV+ECRR D+E YLG HYPATDIPQASRFL MKNKVRMICDCL+PPV+V
Sbjct: 61 VYKFHEDEHGEVVSECRRSDMESYLGLHYPATDIPQASRFLFMKNKVRMICDCLSPPVEV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ-GRK 356
IQD++L QPLSLCGSTLR+PHGCHA+YM NMG+IASLVMSVT+NE +D +D DQ++ RK
Sbjct: 121 IQDERLPQPLSLCGSTLRSPHGCHAQYMANMGTIASLVMSVTVNEDDDMMDGDQQRMARK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQ+NKEV+L+AQ+REKHILR QT+LCDML
Sbjct: 181 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQINKEVDLAAQVREKHILRIQTMLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PV I+TQ+PNVMDLVKCDGAALYY+ K WLLGVTPTE QI+DIAEWLLEYHRG+TG
Sbjct: 241 LRDAPVAIITQSPNVMDLVKCDGAALYYKNKFWLLGVTPTEAQIRDIAEWLLEYHRGNTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGYPGA LGDAVCG+AAV ITS+DFLFWFRSHTAKEIKWGGAKHD G KD
Sbjct: 301 LSTDSLMEAGYPGASVLGDAVCGMAAVSITSRDFLFWFRSHTAKEIKWGGAKHDPGDKDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
GRKMHPRSSFKAFLEVVK RSLPW+DVEMDAI
Sbjct: 361 GRKMHPRSSFKAFLEVVKWRSLPWKDVEMDAI 392
>gi|39753849|gb|AAR30472.1| PHYC [Goupia glabra]
Length = 391
Score = 712 bits (1837), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/391 (84%), Positives = 360/391 (92%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLV EVSDLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVKEVSDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
Y+FH+DEHGEVVAE RRPDLEPYLG HYPATDIPQASRFL MKNKVR+ICDCLAPPVKV
Sbjct: 61 AYRFHDDEHGEVVAERRRPDLEPYLGLHYPATDIPQASRFLFMKNKVRLICDCLAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKL 357
IQDK+L QPLS CGSTLR+PHGCHA+YM NMGSIASLVMSVTIN+ +DE+++DQ++GRKL
Sbjct: 121 IQDKRLAQPLSPCGSTLRSPHGCHAQYMANMGSIASLVMSVTINDDDDEMNSDQQKGRKL 180
Query: 358 WGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLL 417
WGLVVCHHTSPRFVPFPLRYACEFLIQVFGV ++KEVEL+AQ+R+ + VLCDMLL
Sbjct: 181 WGLVVCHHTSPRFVPFPLRYACEFLIQVFGVHISKEVELAAQMRKSIFCEFKLVLCDMLL 240
Query: 418 RDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGL 477
RD+PV I+TQ+PNVMDLVKCDGAALYY+ K WLLGVTPTE QI+DIAEWLLEYH STGL
Sbjct: 241 RDAPVAIITQSPNVMDLVKCDGAALYYKKKFWLLGVTPTEAQIRDIAEWLLEYHNESTGL 300
Query: 478 STDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGG 537
STDSL+EAGYPGA LGDA+CG+AA +ITSKDFLFWFRSHTAKEIKWGGA+HD G +D G
Sbjct: 301 STDSLMEAGYPGASILGDAICGMAAARITSKDFLFWFRSHTAKEIKWGGAEHDPGDQDDG 360
Query: 538 RKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
R MHPRSSFKAFLEVVKQRSLPWEDVEMDAI
Sbjct: 361 RNMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 391
>gi|224576402|gb|ACN56894.1| phytochrome A [Smelowskia annua]
Length = 577
Score = 712 bits (1837), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/505 (66%), Positives = 407/505 (80%), Gaps = 6/505 (1%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFHED+HGEVV+E +P L+PYLG HYPA DIPQA+RFL MKNKVRMI DC A +V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLDPYLGLHYPAADIPQAARFLFMKNKVRMIVDCNAKHARV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD-----NDQE 352
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D +
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQ 180
Query: 353 QGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
+G++LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+L
Sbjct: 181 KGKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDML+RD+P+GIVTQ+PNVMDLVKCDGAAL Y+ K+W LG TP E +++IA WL EYH
Sbjct: 241 CDMLMRDAPLGIVTQSPNVMDLVKCDGAALLYKDKIWKLGTTPCEFHLQEIASWLCEYHM 300
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AG+P AL+LGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 301 DSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIV 591
KD R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E + + ++
Sbjct: 361 DKDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDMNTKVI 420
Query: 592 NVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
+ D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL+VD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEA 480
Query: 652 IGTALVDLVAGDSVDVVKNMLSSAF 676
IG + LV SV+VVK ML +A
Sbjct: 481 IGRHFLTLVEDSSVEVVKRMLEAAL 505
>gi|224576380|gb|ACN56883.1| phytochrome A [Rhammatophyllum erysimoides]
Length = 578
Score = 712 bits (1837), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/506 (67%), Positives = 409/506 (80%), Gaps = 7/506 (1%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFHED+HGEVV+E +P +EPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHEDDHGEVVSEVIKPGMEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDND-----QE 352
QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E + Q
Sbjct: 121 FQDEKLSFDLTLCGSTLRAPHSCHLQYMANMESIASLVMAVVVNEEDGEGGDAPDSTAQP 180
Query: 353 QGRK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTV 411
Q RK LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+
Sbjct: 181 QKRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTL 240
Query: 412 LCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYH 471
LCDML+RD+P+GIVTQ+PNVMDLVKCDGAAL Y+ K+W LG+TP++ Q++DIA WL EYH
Sbjct: 241 LCDMLMRDAPLGIVTQSPNVMDLVKCDGAALLYKDKIWKLGITPSDYQLQDIASWLCEYH 300
Query: 472 RGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDS 531
STGLSTDSL +AG+P AL+LGD+VCG+AAV+I++KD +FWFRSHTA E++WGGAKHD
Sbjct: 301 TDSTGLSTDSLQDAGFPRALSLGDSVCGMAAVRISAKDMIFWFRSHTAGEVRWGGAKHDP 360
Query: 532 GGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMI 590
KD R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E + + I
Sbjct: 361 DDKDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKI 420
Query: 591 VNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQ 650
++ D +I+ + EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+
Sbjct: 421 IHSKLNDLKIDGMQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDE 480
Query: 651 AIGTALVDLVAGDSVDVVKNMLSSAF 676
AIG + LV SV++VK ML +A
Sbjct: 481 AIGKHFLTLVEDSSVEIVKRMLENAL 506
>gi|257852893|gb|ACV71458.1| phytochrome C [Averrhoa carambola]
Length = 382
Score = 711 bits (1836), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/382 (86%), Positives = 359/382 (93%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGN+SLLCDVLV EVSDLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNMSLLCDVLVKEVSDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVVAECRRPDLEPY+G HYPATDIPQASRFL MKNKVRMICDCLA PVKV
Sbjct: 61 VYKFHEDEHGEVVAECRRPDLEPYIGLHYPATDIPQASRFLFMKNKVRMICDCLALPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKL 357
IQDKKL QPLSLCGSTLR+PHGCHA+YM NMGSIASLVMSVTI+E ++E+D+D+++GRKL
Sbjct: 121 IQDKKLAQPLSLCGSTLRSPHGCHAQYMANMGSIASLVMSVTISEDDEEMDSDRQKGRKL 180
Query: 358 WGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLL 417
WGLVVCHHTSPRFVPFPLRYACEFLIQVF VQ+NKEVE++AQ+REKHIL+ QTVLCDMLL
Sbjct: 181 WGLVVCHHTSPRFVPFPLRYACEFLIQVFAVQINKEVEMAAQVREKHILQIQTVLCDMLL 240
Query: 418 RDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGL 477
RDSP GIVT++PNVMDLVKCDGAALYY+ K+WLLGVTP+E QIK++AEWLLEYH STGL
Sbjct: 241 RDSPRGIVTRSPNVMDLVKCDGAALYYKNKVWLLGVTPSEAQIKELAEWLLEYHGASTGL 300
Query: 478 STDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGG 537
STDSL+EAGYPGA LG+AVCG+AAV+I+SKD LFWFRSHTAKEIKWGGAKHD KD G
Sbjct: 301 STDSLMEAGYPGASVLGEAVCGMAAVRISSKDLLFWFRSHTAKEIKWGGAKHDPNNKDDG 360
Query: 538 RKMHPRSSFKAFLEVVKQRSLP 559
RKMHPRSSFKAFLEVVK RSLP
Sbjct: 361 RKMHPRSSFKAFLEVVKWRSLP 382
>gi|21069921|gb|AAM34119.1| phytochrome C [Barnebya dispar]
Length = 392
Score = 711 bits (1836), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/392 (85%), Positives = 358/392 (91%), Gaps = 1/392 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYK AAKAISRLQSLPSGNI LLCDVLV EV DLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKFAAKAISRLQSLPSGNIFLLCDVLVKEVRDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVV+ECRR DLE YLG HYPATDIPQASRFL MKNK+RMICDCLAPPVKV
Sbjct: 61 VYKFHEDEHGEVVSECRRSDLESYLGLHYPATDIPQASRFLFMKNKLRMICDCLAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ-GRK 356
IQD+ L QPLSLCGSTLR+PHGCHA+YM NMG+IASLVMSVTINE +D D +Q Q RK
Sbjct: 121 IQDENLPQPLSLCGSTLRSPHGCHAQYMTNMGTIASLVMSVTINEDDDMKDCEQPQMPRK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTSPRF+PFPLRYACEFLIQVFGVQ+NKEVEL+AQ+REKHILR QT+LCDML
Sbjct: 181 LWGLVVCHHTSPRFIPFPLRYACEFLIQVFGVQINKEVELAAQVREKHILRIQTLLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PV I+TQ+PNVMDLV+CDGAALYY+ K WLLGVTPTE QI+DIAEWLLE H G+TG
Sbjct: 241 LRDAPVAIITQSPNVMDLVRCDGAALYYKNKFWLLGVTPTEAQIRDIAEWLLECHSGNTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGYPGA LGDAVCG+AA+ ITS+DFLFWFRSHTAKEIKWGGAKHD KD
Sbjct: 301 LSTDSLMEAGYPGASVLGDAVCGMAAISITSRDFLFWFRSHTAKEIKWGGAKHDPDDKDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
GRKMHPRSSFKAFLEVVK RSLPWEDVEMDAI
Sbjct: 361 GRKMHPRSSFKAFLEVVKWRSLPWEDVEMDAI 392
>gi|39598896|gb|AAR28992.1| phytochrome C [Sabia swinhoei]
Length = 393
Score = 711 bits (1836), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/393 (85%), Positives = 361/393 (91%), Gaps = 1/393 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLV EVSDLTGYDRVM
Sbjct: 1 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVREVSDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEV+AECRR DLEPYLG HYPATDIPQASRFL MKNKVRMICDC A PVKV
Sbjct: 61 VYKFHEDEHGEVIAECRRSDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCSARPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDND-QEQGRK 356
+QDK+L +PLSLCGSTLRAPHGCHA+YM NMGSIASLVMSVTINE +D+ Q++GRK
Sbjct: 121 VQDKRLARPLSLCGSTLRAPHGCHAQYMANMGSIASLVMSVTINEDDDDEMESDQKKGRK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWG VVCHHTSPRFVPFPLRYACEFLIQVFG+QVNKE EL+AQLREKHIL+TQT+LCDML
Sbjct: 181 LWGFVVCHHTSPRFVPFPLRYACEFLIQVFGIQVNKESELAAQLREKHILQTQTMLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PVGIV+Q+PNVMDLVKC GAALYY+ K WLLGVTPTEEQI+DI W +E H STG
Sbjct: 241 LRDAPVGIVSQSPNVMDLVKCSGAALYYKNKFWLLGVTPTEEQIRDIIGWFVENHGQSTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGYPGA LGDAVCG+AA+KITSKDFLFWFRSHTAKEIKWGGAKHD KD
Sbjct: 301 LSTDSLMEAGYPGASVLGDAVCGMAAIKITSKDFLFWFRSHTAKEIKWGGAKHDPVDKDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIH 569
GRKMHPRSSFKAFLEVVK+RSLPWED+EMDAI
Sbjct: 361 GRKMHPRSSFKAFLEVVKRRSLPWEDIEMDAIQ 393
>gi|224576340|gb|ACN56863.1| phytochrome A [Myagrum perfoliatum]
Length = 551
Score = 711 bits (1836), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/504 (67%), Positives = 408/504 (80%), Gaps = 5/504 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD----NDQEQ 353
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D ++
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTSPQK 180
Query: 354 GRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
++LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LGVTP+E +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGVTPSEFHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+S+D +FWFRSHTA E++WGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
KD R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E + + I++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL T+EMVRLIETA VPILAVDA G VNGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAXTSEMVRLIETATVPILAVDADGLVNGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAF 676
G L LV SV++VK ML +A
Sbjct: 481 GKHLPTLVEDSSVEIVKRMLENAL 504
>gi|345424396|gb|AEN85302.1| phytochrome A, partial [Erucaria erucarioides]
Length = 598
Score = 711 bits (1836), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/504 (66%), Positives = 410/504 (81%), Gaps = 5/504 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTVVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG--- 354
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D G
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEEDGPDSTGPQK 180
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
++LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GI++Q+PN+MDLVKCDGAAL Y+ K+W LGVTP++ ++++A WL EYH
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGVTPSDYHLQEVASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P AL+LGD+VCG+AAV+I+SKD +FWFRSHTA E+KWGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAAEVKWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
KD R+MHPRSSFKAFLEVVK+RSLPW+D EMDAIHSLQLILR + +D E + + I++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKRRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTTIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAF 676
G L+ LV SV++VK ML +A
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENAL 504
>gi|39598880|gb|AAR28984.1| phytochrome C [Buxus sempervirens]
Length = 392
Score = 711 bits (1836), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/392 (83%), Positives = 361/392 (92%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP D PVTA GALKSYKLAAKAISRLQSLP+GNISLLCDVLV EVS+LTGYDRVM
Sbjct: 1 DLEPVNPLDPPVTATGALKSYKLAAKAISRLQSLPNGNISLLCDVLVREVSELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVVAE R +LEPYLG H+PATDIPQASRFL MKNKVRMICDCLAPPV+V
Sbjct: 61 VYKFHEDEHGEVVAETHRTNLEPYLGLHFPATDIPQASRFLFMKNKVRMICDCLAPPVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKL 357
+QDK+L++PLSLC STLRAPHGCHA+YM+NMGSIASLVMSVTINE +DE+D+DQ++GRKL
Sbjct: 121 VQDKRLERPLSLCSSTLRAPHGCHAQYMKNMGSIASLVMSVTINEDDDEMDSDQQKGRKL 180
Query: 358 WGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLL 417
WGLVVCHHTSPRFVPFPLRYACEFLIQVF +Q+NKEVEL+AQ+REKHILR Q++LC MLL
Sbjct: 181 WGLVVCHHTSPRFVPFPLRYACEFLIQVFSIQLNKEVELAAQVREKHILRNQSMLCGMLL 240
Query: 418 RDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGL 477
R+SPVGI+TQ+PNVMDLVKCDGAALYY+ K WLLGVTPTE QI DIA WLLEYH GSTGL
Sbjct: 241 RESPVGIITQSPNVMDLVKCDGAALYYKDKFWLLGVTPTEAQISDIAGWLLEYHNGSTGL 300
Query: 478 STDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGG 537
S DSL+EAGYPGA LGDAVCG+AA+K+TSKDFLFWFRS T KEIKWGGAKH+ KD G
Sbjct: 301 SADSLLEAGYPGASVLGDAVCGMAAIKLTSKDFLFWFRSRTGKEIKWGGAKHEPFDKDEG 360
Query: 538 RKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIH 569
RKMHPRSSFKAFLEVVK RSLPWED+EMDAI
Sbjct: 361 RKMHPRSSFKAFLEVVKWRSLPWEDIEMDAIQ 392
>gi|345424400|gb|AEN85304.1| phytochrome A, partial [Erucaria erucarioides]
Length = 598
Score = 711 bits (1835), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/504 (66%), Positives = 408/504 (80%), Gaps = 5/504 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG--- 354
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D G
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEEDGPDSTGPQK 180
Query: 355 -RKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
++LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GI +Q+PN+MDLVKCDGAAL Y+ K+W LGVTP++ +++IA WL EYH
Sbjct: 241 DMLMRDAPLGITSQSPNIMDLVKCDGAALLYKDKVWKLGVTPSDYHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P AL+LGD+VCG+AAV+I+SKD +FWFRSHTA E+KWGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAAEVKWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
KD R+MHPRSSFKAFLEVVK+RSLPW+D EMDAIHSLQ ILR + +D E + + I++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKRRSLPWKDYEMDAIHSLQFILRNAFKDGETTDVNTTIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAF 676
G L+ LV SV++VK ML +A
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENAL 504
>gi|89331127|emb|CAJ80930.1| phytochrome A [Lathraea squamaria]
Length = 612
Score = 711 bits (1835), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/525 (64%), Positives = 408/525 (77%), Gaps = 8/525 (1%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ L+ID EPV P +VP+TAAGAL+SYKLA+KAISRLQSL SG+I L
Sbjct: 1 SGKPFYAIIHRVTASLIIDFEPVKPHEVPMTAAGALQSYKLASKAISRLQSLSSGSIKRL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
C+ +V EV +LTGYDRVM YKFHED+HGEV E +P LEPY+G HYPATDIPQA+RFL
Sbjct: 61 CETMVQEVFELTGYDRVMTYKFHEDDHGEVFTEITKPGLEPYVGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDC A V+VIQD+ L L+LCGSTLRAPH CH +YMENM SIASLVMS+
Sbjct: 121 MKNKVRMICDCRANHVRVIQDENLPMDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSIV 180
Query: 340 INE-----AEDELDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEV 394
+NE A DE ++ ++LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKE+
Sbjct: 181 VNEGTEESAPDETSQQLDKRKRLWGLVVCHNTSPRFVPFPLRYACEFLSQVFAIHVNKEL 240
Query: 395 ELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVT 454
E Q+ EK+ILRTQT+LCDMLLRD+ +GIV+Q+PNVMDLV CDG+ L ++ + + +G+T
Sbjct: 241 ESENQMLEKNILRTQTLLCDMLLRDALLGIVSQSPNVMDLVTCDGSVLLHKNQKYRIGIT 300
Query: 455 PTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWF 514
P + QI+DI WL EYHR STGLSTDSL +AG+PGALALGD +CG+AAV+IT +D+LFWF
Sbjct: 301 PRDFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDVICGMAAVRITDRDWLFWF 360
Query: 515 RSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLI 574
RSHTA EI WGGAKH+ G +D GRKMHPRSSFKAFLE VK RSLPW+D E+DAIHSLQLI
Sbjct: 361 RSHTASEIHWGGAKHELGERDDGRKMHPRSSFKAFLEYVKTRSLPWKDFELDAIHSLQLI 420
Query: 575 LRGSLQDEVAEDSKM---IVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASG 631
LR + E+ E + + + +I+ + EL +T+EMVRLIETA+VPI AV G
Sbjct: 421 LRNASSKEMEERKDLEGVEIQARLNELQIDGVQELEAVTSEMVRLIETASVPIFAVGVDG 480
Query: 632 NVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
VNGWN+K A+LTGL VD+AIG + LV S + V ML A
Sbjct: 481 LVNGWNTKIADLTGLPVDKAIGEHFLSLVEESSAEAVSKMLELAL 525
>gi|224576396|gb|ACN56891.1| phytochrome A [Sisymbriopsis yechengnica]
Length = 575
Score = 711 bits (1834), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/503 (67%), Positives = 408/503 (81%), Gaps = 6/503 (1%)
Query: 180 EPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVY 239
EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM Y
Sbjct: 1 EPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAY 60
Query: 240 KFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQ 299
KFHED+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V Q
Sbjct: 61 KFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRVFQ 120
Query: 300 DKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDND----QEQGR 355
D+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D+ Q Q R
Sbjct: 121 DEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDDPDSPAQPQKR 180
Query: 356 K-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCD 414
K LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VN+EVEL Q+ EK+ILRTQT+LCD
Sbjct: 181 KRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNREVELENQIVEKNILRTQTLLCD 240
Query: 415 MLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGS 474
ML+RD+P+GIVTQ+PN+MDL KCDGAAL Y+ K+W LG+TP+E Q+++IA WL EYH S
Sbjct: 241 MLMRDAPLGIVTQSPNIMDLAKCDGAALLYKDKIWKLGITPSEYQLQEIASWLCEYHTDS 300
Query: 475 TGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGK 534
TGLSTDSL +AG+P AL+LGD+VCG+AAV+I++KD +FWFRSHTA E++WGGAKHD K
Sbjct: 301 TGLSTDSLHDAGFPRALSLGDSVCGMAAVRISTKDMIFWFRSHTAGEVRWGGAKHDPDDK 360
Query: 535 DGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVNV 593
D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E + + I++
Sbjct: 361 DDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKIIHS 420
Query: 594 PSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIG 653
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AIG
Sbjct: 421 KLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAIG 480
Query: 654 TALVDLVAGDSVDVVKNMLSSAF 676
L+ LV S+++ K ML +A
Sbjct: 481 KHLLTLVEDSSMEIAKRMLENAL 503
>gi|224576364|gb|ACN56875.1| phytochrome A [Sterigmostemum violaceum]
Length = 577
Score = 711 bits (1834), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/505 (67%), Positives = 409/505 (80%), Gaps = 6/505 (1%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTVVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFHED+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNARHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD----NDQEQ 353
QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D Q Q
Sbjct: 121 FQDEKLSSDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTQPQ 180
Query: 354 GRK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
RK LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKEVEL +Q+ EK+ILRTQT+L
Sbjct: 181 KRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELESQIVEKNILRTQTLL 240
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDML+RD+ +GIVTQ+PN+MDLVKCDGAAL Y+ K+W LG+TP+E Q++DIA WL EYH
Sbjct: 241 CDMLMRDASLGIVTQSPNIMDLVKCDGAALLYKDKVWKLGITPSEYQLQDIASWLCEYHT 300
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AG+P AL+ GD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 301 DSTGLSTDSLHDAGFPRALSPGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPE 360
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIV 591
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E + + I+
Sbjct: 361 DRDDPRRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFRDGEPTDVNTKII 420
Query: 592 NVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
+ D +I+ + EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+A
Sbjct: 421 HSKLNDLKIDGLQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 652 IGTALVDLVAGDSVDVVKNMLSSAF 676
IG L+ LV SV++VK ML +A
Sbjct: 481 IGKHLLTLVEDSSVEIVKRMLENAL 505
>gi|20530203|gb|AAM27033.1| phytochrome C [Rhynchophora phillipsonii]
Length = 392
Score = 711 bits (1834), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/392 (84%), Positives = 361/392 (92%), Gaps = 1/392 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLV EV DLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVKEVRDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
V KFHEDEHGEVV+ECRR DLE YLG HYPATDIPQASRFL MKNKVRMICDC+APPVKV
Sbjct: 61 VCKFHEDEHGEVVSECRRSDLESYLGLHYPATDIPQASRFLFMKNKVRMICDCVAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ-GRK 356
+QD++L QPLSLC STLR+PHGCHA+YM NMG +ASLVMSVT+NE +D +D+DQ Q RK
Sbjct: 121 VQDERLPQPLSLCASTLRSPHGCHAQYMTNMGIVASLVMSVTVNEEDDMVDSDQPQMARK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS RFVPFPLRYACEFLIQVFGVQ+NKEVEL+AQ+REKHIL+ QT+LCDML
Sbjct: 181 LWGLVVCHHTSTRFVPFPLRYACEFLIQVFGVQINKEVELAAQVREKHILQIQTMLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PV I+TQ+PNVMDLVKCDGAALY++ K WLLGV+PTEEQI+DIAEWLLEYH G+TG
Sbjct: 241 LRDAPVAIITQSPNVMDLVKCDGAALYFKNKTWLLGVSPTEEQIRDIAEWLLEYHSGNTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL++AGYPGA ALGDAVCG+AAV ITS+DFL WFRSHTAKEIKWGGAKHD KD
Sbjct: 301 LSTDSLMDAGYPGASALGDAVCGMAAVSITSRDFLLWFRSHTAKEIKWGGAKHDPDDKDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
GRKMHPRSSFKAFLEVVK RS+PWEDVEMDAI
Sbjct: 361 GRKMHPRSSFKAFLEVVKWRSMPWEDVEMDAI 392
>gi|21070053|gb|AAM34185.1| phytochrome C [Mascagnia hippocrateoides]
Length = 392
Score = 711 bits (1834), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/392 (85%), Positives = 365/392 (93%), Gaps = 1/392 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLV EV DLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVKEVRDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVV+ECRR DLE YLG HYPATDIPQASRFL MKNKVRMICDCLAPPVKV
Sbjct: 61 VYKFHEDEHGEVVSECRRSDLESYLGLHYPATDIPQASRFLFMKNKVRMICDCLAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQG-RK 356
IQD++L QPLSLCGSTLR+PHGCHA+YM NMG+IASLVMSVTINE +D +D DQ+Q RK
Sbjct: 121 IQDERLPQPLSLCGSTLRSPHGCHAQYMTNMGTIASLVMSVTINEDDDMMDGDQQQMTRK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHH SPRFVPFPLRYACEFLIQVFGVQ+NKEVEL+AQ+REKHIL+ QT+LCDML
Sbjct: 181 LWGLVVCHHASPRFVPFPLRYACEFLIQVFGVQINKEVELAAQVREKHILQIQTMLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PV I+TQ+PNVMDLVKCDGAALY++ K+WLLGVTPTEEQI+DIAEWLLEYH G+TG
Sbjct: 241 LRDAPVAIITQSPNVMDLVKCDGAALYFKNKIWLLGVTPTEEQIRDIAEWLLEYHSGNTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGYPGA LGDAVCG+AAV ITS+DFLFWFRSHTAKE+KWGGAKHD KD
Sbjct: 301 LSTDSLMEAGYPGASVLGDAVCGMAAVSITSRDFLFWFRSHTAKEVKWGGAKHDPHDKDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
GRKMHPRSSFKAFLEVVK RS+PWED+EMDAI
Sbjct: 361 GRKMHPRSSFKAFLEVVKWRSMPWEDIEMDAI 392
>gi|21069941|gb|AAM34129.1| phytochrome C [Dinemandra ericoides]
Length = 392
Score = 711 bits (1834), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/392 (85%), Positives = 365/392 (93%), Gaps = 1/392 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGNI LLCDVLV EV DLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNIPLLCDVLVKEVRDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVV+ECRR D+E YLG HYPATDIPQASRFL MKNKVRMICDCL+PPV+V
Sbjct: 61 VYKFHEDEHGEVVSECRRSDMESYLGLHYPATDIPQASRFLFMKNKVRMICDCLSPPVEV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ-GRK 356
IQD++L QPLSLCGSTLR+PHGCHA+YM NMG+IASLVMSVT+NE +D +D DQ++ RK
Sbjct: 121 IQDERLPQPLSLCGSTLRSPHGCHAQYMANMGTIASLVMSVTVNEDDDMMDGDQQRMARK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQ+NKEV+L+AQ+REKHILR QT+LCDML
Sbjct: 181 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQINKEVDLAAQVREKHILRIQTMLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PV I+TQ+PNVMDLVKCDGAALYY+ K WLLGVTPTE QI+DIAEWLLEYHRG+TG
Sbjct: 241 LRDAPVAIITQSPNVMDLVKCDGAALYYKNKFWLLGVTPTEAQIRDIAEWLLEYHRGNTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGYPGA LGDAVCG+AAV ITS+DFLFWFRSHTAKEIKWGGAKHD G KD
Sbjct: 301 LSTDSLMEAGYPGASVLGDAVCGMAAVSITSRDFLFWFRSHTAKEIKWGGAKHDPGDKDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
GRKMHPRSSFKAFLEVVK RSLPW+D+EMDAI
Sbjct: 361 GRKMHPRSSFKAFLEVVKWRSLPWKDMEMDAI 392
>gi|89331069|emb|CAJ80901.1| phytochrome A [Castilleja fissifolia]
Length = 609
Score = 711 bits (1834), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/525 (64%), Positives = 414/525 (78%), Gaps = 11/525 (2%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ ++ID EPV P +VP+TAAGAL+SYKLAAKAI+RLQ+LP+G++ L
Sbjct: 1 SGKPFYAIIHRVTGSMIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALPNGSMERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
CD +V EV +LTGYDRVM+YKFH+D+HGEV++E +P L+PY+G HYPATDIPQA+RFL
Sbjct: 61 CDTMVQEVFELTGYDRVMIYKFHDDDHGEVLSEITKPGLDPYVGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
+KNKVRMICDC A VKVIQD L L+LCGS RAPH CH +YMENM SIASLVMSV
Sbjct: 121 IKNKVRMICDCRANHVKVIQDDNLPFDLTLCGSNPRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 340 INEA-EDELDNDQ--EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVEL 396
+NE ED D+ ++ ++LWGLVVCH+TSPRF+PFPLRYACEFL QVF + VNKE+EL
Sbjct: 181 VNEGNEDGPDSSSHPDKKKQLWGLVVCHNTSPRFIPFPLRYACEFLAQVFTIHVNKEIEL 240
Query: 397 SAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPT 456
Q+ EK+ILRTQT+LCDMLLRD+P+GIV+++PNVMDLVKCDGA L ++ K + LG+TP+
Sbjct: 241 ENQMLEKNILRTQTLLCDMLLRDAPLGIVSRSPNVMDLVKCDGAVLIHKTKKYRLGMTPS 300
Query: 457 EEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRS 516
+ QI+DI WL EYHR STGLSTDSL +AG+PGALALGDAVCG+AAV+IT D+LFWFRS
Sbjct: 301 DFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITDTDWLFWFRS 360
Query: 517 HTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILR 576
HTA EI+WGGAKH+ KD GRKMHPRSSFKAFL+VVK RSLPW+D EMDAIHSL+LILR
Sbjct: 361 HTASEIRWGGAKHEPDDKDDGRKMHPRSSFKAFLDVVKTRSLPWKDFEMDAIHSLRLILR 420
Query: 577 GSLQDEVAEDSKMIVNVPSVDDRIEKID-----ELRIITNEMVRLIETAAVPILAVDASG 631
S E K V + R+ + EL +T+EMVRLIETA+VPI AVD G
Sbjct: 421 NSSNKEA---EKRDVEGKEIHARLNDLQLDGKKELETVTSEMVRLIETASVPIFAVDVDG 477
Query: 632 NVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
+VNGWN+K A+LTGL VD+AIG + LV S + V ML A
Sbjct: 478 HVNGWNTKIADLTGLPVDKAIGRHFLALVEDSSAEAVNKMLELAL 522
>gi|40647471|gb|AAR88449.1| phytochrome C [Camarea axillaris]
Length = 392
Score = 711 bits (1834), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/392 (84%), Positives = 359/392 (91%), Gaps = 1/392 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKL AKAISRLQSLPSGNISLLCDVLV EV DLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLVAKAISRLQSLPSGNISLLCDVLVKEVRDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVV+ECRR DLE YLG HYPATDIPQASRFL MKNKVRMICDCLAPPVKV
Sbjct: 61 VYKFHEDEHGEVVSECRRSDLESYLGLHYPATDIPQASRFLFMKNKVRMICDCLAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ-GRK 356
IQD++L QPLSLCGSTLR+PHGCHA+YM NMG+IASLVMSVT+NE +D +D DQ+ +K
Sbjct: 121 IQDERLPQPLSLCGSTLRSPHGCHAQYMTNMGTIASLVMSVTVNEDDDTMDGDQQHMTKK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHH SPRFVPFPLRYACEFLIQVFGVQ+NKEVEL+AQ+REKHIL+ QT+LCDML
Sbjct: 181 LWGLVVCHHASPRFVPFPLRYACEFLIQVFGVQINKEVELAAQVREKHILQIQTMLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PV I+TQ+PNVMDLVKCDGAALY++ K WLLGVTPTEEQI+ IAEWLLEYH G+TG
Sbjct: 241 LRDAPVAIITQSPNVMDLVKCDGAALYFKNKTWLLGVTPTEEQIRGIAEWLLEYHSGNTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGYPGA GDAVCG+AAV ITS+DFLFWFRSHTA+EIKWGGAKHD KD
Sbjct: 301 LSTDSLMEAGYPGASGFGDAVCGMAAVSITSRDFLFWFRSHTAEEIKWGGAKHDPDDKDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
RKMHPRSSFKAFLEVVK RS+PWEDVEMDAI
Sbjct: 361 LRKMHPRSSFKAFLEVVKWRSMPWEDVEMDAI 392
>gi|345424424|gb|AEN85316.1| phytochrome A, partial [Erucaria pinnata]
Length = 598
Score = 711 bits (1834), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/504 (67%), Positives = 411/504 (81%), Gaps = 5/504 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE---DELDNDQEQG 354
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + D D+ Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GI++Q+PNVMDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIISQSPNVMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+S+D +FWFRSHTA E++WGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
KD R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E A+ + I++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G +NGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAF 676
G L+ LV SV++VK ML +A
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENAL 504
>gi|345424278|gb|AEN85243.1| phytochrome A, partial [Coincya longirostra]
Length = 599
Score = 711 bits (1834), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/505 (66%), Positives = 408/505 (80%), Gaps = 6/505 (1%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD-----NDQE 352
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D +
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAAPDSTAPQ 180
Query: 353 QGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
+ ++LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+L
Sbjct: 181 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDML+RD+P+GIV+Q+PN+MDLVKCDGAAL Y+ K+W LG+TP+E Q+ +IA WL EYH
Sbjct: 241 CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGITPSEFQLHEIASWLCEYHT 300
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 301 DSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD 360
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIV 591
KD R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E + + I+
Sbjct: 361 DKDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFRDGETTDVNTKII 420
Query: 592 NVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
+ D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+A
Sbjct: 421 HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 652 IGTALVDLVAGDSVDVVKNMLSSAF 676
IG + LV SV++VK ML A
Sbjct: 481 IGKHFLTLVEDSSVEIVKRMLEKAL 505
>gi|345424326|gb|AEN85267.1| phytochrome A, partial [Crambella teretifolia]
Length = 598
Score = 710 bits (1833), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/504 (66%), Positives = 411/504 (81%), Gaps = 5/504 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD----NDQEQ 353
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D ++
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDGPDSTSPQK 180
Query: 354 GRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
++LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GI++Q+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P AL+LGD+VCG+AAV+I+SKD +FWFRSHTA E+KWGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAAEVKWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
KD R+MHPRSSFKAFLEVVK+RSLPW+D EMDAIHSLQLILR + +D E + + I++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKRRSLPWKDYEMDAIHSLQLILRNAFKDGETTDMNTKIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAF 676
G L+ LV SV++VK ML +A
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENAL 504
>gi|21070011|gb|AAM34164.1| phytochrome C [Gaudichaudia albida]
Length = 392
Score = 710 bits (1833), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/392 (84%), Positives = 360/392 (91%), Gaps = 1/392 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLV EV DLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVKEVRDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVV+ECRR DLE YLG HYPATDIPQASRFL MKNKVRMI DCLAPPVKV
Sbjct: 61 VYKFHEDEHGEVVSECRRSDLESYLGLHYPATDIPQASRFLFMKNKVRMIYDCLAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ-GRK 356
IQDK+L QPLSLCGSTLR+PHGCHA+YM NMG+IASLVMSVT+NE +D +D DQ+ +K
Sbjct: 121 IQDKRLPQPLSLCGSTLRSPHGCHAQYMTNMGTIASLVMSVTVNEDDDTMDGDQQHMTKK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQ+NKEVEL+AQ+REKHIL+ QT+LCDML
Sbjct: 181 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQINKEVELAAQVREKHILQIQTMLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PV I+TQ+PNVMDLV CDGAALY++ K WLLGVTPTEEQI+ IAEWLL+YH G+TG
Sbjct: 241 LRDAPVTIITQSPNVMDLVNCDGAALYFKNKTWLLGVTPTEEQIRGIAEWLLKYHSGNTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGYPGA LGDAVCG+AAV ITS+DFLFWFRSHTAKEIKWGGAKHD KD
Sbjct: 301 LSTDSLMEAGYPGASGLGDAVCGMAAVSITSRDFLFWFRSHTAKEIKWGGAKHDPDDKDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
RKMHPRSSFKAFLEVVK RS+PWED+EMDAI
Sbjct: 361 LRKMHPRSSFKAFLEVVKWRSMPWEDIEMDAI 392
>gi|345424428|gb|AEN85318.1| phytochrome A, partial [Erucaria pinnata]
Length = 598
Score = 710 bits (1833), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/504 (67%), Positives = 410/504 (81%), Gaps = 5/504 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHHDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE---DELDNDQEQG 354
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + D D+ Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GI++Q+PNVMDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIISQSPNVMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+S+D +FWFRSHTA E++WGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
KD R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E A+ + I++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETADMNTRIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G +NGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAF 676
G L+ LV SV++VK ML +A
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENAL 504
>gi|345424330|gb|AEN85269.1| phytochrome A, partial [Crambella teretifolia]
Length = 598
Score = 710 bits (1833), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/504 (66%), Positives = 411/504 (81%), Gaps = 5/504 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD----NDQEQ 353
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D ++
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDGPDSTSPQK 180
Query: 354 GRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
++LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GI++Q+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P AL+LGD+VCG+AAV+I+SKD +FWFRSHTA E+KWGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAAEVKWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
KD R+MHPRSSFKAFLEVVK+RSLPW+D EMDAIHSLQLILR + +D E + + I++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKRRSLPWKDYEMDAIHSLQLILRNAFKDGETTDMNTKIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAF 676
G L+ LV SV++VK ML +A
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENAL 504
>gi|39598890|gb|AAR28989.1| phytochrome C [Liriodendron tulipifera]
Length = 394
Score = 710 bits (1833), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/394 (84%), Positives = 361/394 (91%), Gaps = 2/394 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLV EVS+LTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVREVSELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFHE EHGEV+AECRR +LEPYLG HYPATDIPQASRFL MKNKVRMICDCLA PV+V
Sbjct: 61 AYKFHEVEHGEVIAECRRSELEPYLGLHYPATDIPQASRFLFMKNKVRMICDCLALPVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ-GRK 356
IQDKKL QPLSLCGSTLRAPHGCH++YM +MGSIASLVMSVTINE +D+ ++Q+Q GRK
Sbjct: 121 IQDKKLAQPLSLCGSTLRAPHGCHSQYMASMGSIASLVMSVTINEDDDDTSSEQQQKGRK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTSPRFVPFPLRYACEFL+QVFG+Q+NKEVEL+AQ+RE+HILR QTVLCDML
Sbjct: 181 LWGLVVCHHTSPRFVPFPLRYACEFLVQVFGIQLNKEVELAAQMRERHILRMQTVLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PVGI+TQ+PNVMDLVKCDGAALYYR + WLLG TP E QI+DIA WLLEYH +TG
Sbjct: 241 LRDAPVGIITQSPNVMDLVKCDGAALYYRNQFWLLGTTPMEAQIRDIAGWLLEYHDSTTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGK-D 535
LSTDSL EAGYPGA LGD VCG+AA+KITSKDFLFWFRSHTAKEIKWGGAKHD K D
Sbjct: 301 LSTDSLTEAGYPGAADLGDDVCGMAAIKITSKDFLFWFRSHTAKEIKWGGAKHDPVDKDD 360
Query: 536 GGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIH 569
GRKMHPR+SFKAFLEVVK+RSLPWEDVEMDAI
Sbjct: 361 DGRKMHPRASFKAFLEVVKRRSLPWEDVEMDAIQ 394
>gi|21070051|gb|AAM34184.1| phytochrome C [Callaeum septentrionale]
Length = 392
Score = 710 bits (1833), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/392 (86%), Positives = 364/392 (92%), Gaps = 1/392 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLV EV DLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVKEVRDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVV+ECRR DLE YLG HYPATDIPQASRFL MKNKVRMICDCLAPPVKV
Sbjct: 61 VYKFHEDEHGEVVSECRRSDLESYLGLHYPATDIPQASRFLFMKNKVRMICDCLAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ-GRK 356
IQD++L QPLSLCGSTLR+PHGCHA+YM NMG+IASLVMSVTINE +D +D DQ+Q RK
Sbjct: 121 IQDERLPQPLSLCGSTLRSPHGCHAQYMTNMGTIASLVMSVTINEDDDMMDGDQQQMTRK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQ+NKEVEL+AQ+REKHIL+ QT+LCDML
Sbjct: 181 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQINKEVELAAQVREKHILQIQTMLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PV I+TQ+PNVMDLVKCDG ALY++ K WLLGVTPTEEQI+DIAEWLLEYH G+TG
Sbjct: 241 LRDAPVAIITQSPNVMDLVKCDGTALYFKNKTWLLGVTPTEEQIRDIAEWLLEYHSGNTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGYPGA LGDAVCG+AAV ITS+DFLFWFRSHTAKEIKWGGAKHD KD
Sbjct: 301 LSTDSLMEAGYPGASVLGDAVCGMAAVSITSRDFLFWFRSHTAKEIKWGGAKHDPDEKDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
GRKMHPRSSFKAFLEVVK RS+PWED+EMDAI
Sbjct: 361 GRKMHPRSSFKAFLEVVKWRSMPWEDIEMDAI 392
>gi|345424422|gb|AEN85315.1| phytochrome A, partial [Erucaria pinnata]
gi|345424426|gb|AEN85317.1| phytochrome A, partial [Erucaria pinnata]
Length = 598
Score = 710 bits (1833), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/504 (67%), Positives = 410/504 (81%), Gaps = 5/504 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHHDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE---DELDNDQEQG 354
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + D D+ Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSSAPQK 180
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GI++Q+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+S+D +FWFRSHTA E++WGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
KD R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E A+ + I++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G +NGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAF 676
G L+ LV SV++VK ML +A
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENAL 504
>gi|21069929|gb|AAM34123.1| phytochrome C [Caucanthus auriculatus]
Length = 392
Score = 710 bits (1833), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/392 (84%), Positives = 359/392 (91%), Gaps = 1/392 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLV EV DLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVKEVRDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVV+EC R DLE YLG HYPATDIPQASRFL MKNKVRMICDC+APPVKV
Sbjct: 61 VYKFHEDEHGEVVSECHRSDLESYLGLHYPATDIPQASRFLFMKNKVRMICDCVAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ-GRK 356
IQ+++L QPLS CGSTLR+PHGCHA+YM NMG IASLVMSVT+NE +D +D DQ Q RK
Sbjct: 121 IQEERLPQPLSPCGSTLRSPHGCHAQYMTNMGIIASLVMSVTVNEEDDMVDGDQPQMARK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTS RFVPFPLRYACEFLIQVFGVQ+NKEVEL+AQ+REKHIL+ QT+LCDML
Sbjct: 181 LWGLVVCHHTSTRFVPFPLRYACEFLIQVFGVQINKEVELAAQVREKHILQIQTMLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PV I+TQ+PNVMDLVKCDGAALY++ K WLLGVTPTEEQI+DIAEWL EYH G+TG
Sbjct: 241 LRDAPVAIITQSPNVMDLVKCDGAALYFKNKTWLLGVTPTEEQIRDIAEWLPEYHSGNTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGYPGA ALGDAVCG+AAV ITS+DFL WFRSHTAKEIKWGGAKHD KD
Sbjct: 301 LSTDSLMEAGYPGASALGDAVCGMAAVSITSRDFLLWFRSHTAKEIKWGGAKHDPDDKDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
GRKMHPRSSFKAFLEVVK RS+PWEDVEMDAI
Sbjct: 361 GRKMHPRSSFKAFLEVVKWRSMPWEDVEMDAI 392
>gi|89331059|emb|CAJ80896.1| phytochrome A [Castilleja exserta]
Length = 609
Score = 710 bits (1832), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/525 (64%), Positives = 413/525 (78%), Gaps = 11/525 (2%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ ++ID EPV P +VP+TAAGAL+SYKLAAKAI+RLQ+LP+G++ L
Sbjct: 1 SGKPFYAIIHRVTGSMIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALPNGSMERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
CD +V EV +LTGYDRVM+YKFH+D+HGEV++E +P L+PY+G HYPATDIPQA+RFL
Sbjct: 61 CDTMVQEVFELTGYDRVMIYKFHDDDHGEVLSEITKPGLDPYVGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
+KNKVRMICDC A VKVIQD L L+LCGS LRAPH CH +YMENM SIASLVMSV
Sbjct: 121 IKNKVRMICDCRANHVKVIQDANLPFDLTLCGSNLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 340 INEA-EDELDNDQ--EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVEL 396
+NE ED D+ ++ ++LWGLVVCH+TSPRFVPFPLRYACE L QVF + VNKE+EL
Sbjct: 181 VNEGNEDGPDSSSHPDKKKRLWGLVVCHNTSPRFVPFPLRYACELLAQVFAIHVNKEIEL 240
Query: 397 SAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPT 456
Q+ EK+ILRTQT+LCDML+RD+P+GIV+Q+PNVMDLVKCDGA L ++ K + LG+TP+
Sbjct: 241 ENQMLEKNILRTQTLLCDMLMRDAPLGIVSQSPNVMDLVKCDGAILIHKAKKYRLGMTPS 300
Query: 457 EEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRS 516
+ QI+DI WL EYHR STGLSTDSL +AG+PGALALGDAVCG+AAV+IT D+LFWFRS
Sbjct: 301 DFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITDTDWLFWFRS 360
Query: 517 HTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILR 576
HTA EI+WGGA+++ G KD GRKMHPRSSFKAFL+VVK RSLPW+D EMDAIHSLQLILR
Sbjct: 361 HTASEIRWGGARNEPGDKDDGRKMHPRSSFKAFLDVVKTRSLPWKDFEMDAIHSLQLILR 420
Query: 577 GSLQDEVAEDSKMIVNVPSVDDRIEKID-----ELRIITNEMVRLIETAAVPILAVDASG 631
S E K V + R+ + EL +T+EMVRLIETA+VPI AVD G
Sbjct: 421 NSSNKEA---EKRDVEGKEIHARLNDLQLDGKKELEAVTSEMVRLIETASVPIFAVDVDG 477
Query: 632 NVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
VNGWN+K A+LTGL VD+AIG + LV + V ML A
Sbjct: 478 LVNGWNTKIADLTGLPVDKAIGRHFLALVEDSFAEAVNKMLELAL 522
>gi|345424198|gb|AEN85203.1| phytochrome A, partial [Cakile arabica]
gi|345424416|gb|AEN85312.1| phytochrome A, partial [Erucaria ollivieri]
Length = 598
Score = 710 bits (1832), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/504 (67%), Positives = 411/504 (81%), Gaps = 5/504 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAE---DELDNDQEQG 354
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + D D+ Q
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAPQK 180
Query: 355 RK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
RK LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GI++Q+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+S+D +FWFRSHTA E++WGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
KD R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E A+ + I++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETADMNTKIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G +NGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAF 676
G L+ LV SV++VK ML +A
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENAL 504
>gi|345424410|gb|AEN85309.1| phytochrome A, partial [Erucaria microcarpa]
Length = 598
Score = 710 bits (1832), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/504 (66%), Positives = 410/504 (81%), Gaps = 5/504 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYP TDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPTTDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD----NDQEQ 353
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D ++
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTSPQK 180
Query: 354 GRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
++LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GI++Q+PN+MDLVKCDGAAL Y+ K+W LG+TPT+ +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPTDFHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P AL+LGD+VCG+AAV+I+S+D +FWFRSHTA E++WGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
KD R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E A+ + I++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESADMNTKIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAF 676
G L+ LV SV++VK ML SA
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLESAL 504
>gi|39753887|gb|AAR30491.1| PHYC [Phyllanthus epiphyllanthus]
Length = 391
Score = 710 bits (1832), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/391 (84%), Positives = 360/391 (92%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNPDDVPVTAAGALKSYKLAAKAIS+LQSLPSGNISLLCDVLV EVS+LTGYDRVM
Sbjct: 1 DLEPVNPDDVPVTAAGALKSYKLAAKAISKLQSLPSGNISLLCDVLVKEVSELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFH+DEHGEVVAE RPDLEPYLG HYPATDIPQASRFL MKNKVRMICDC APPVKV
Sbjct: 61 VYKFHQDEHGEVVAESCRPDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCQAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKL 357
+QDK++ Q LSLCGSTLR+PHGCHA+YM NMG+IASLVMSVTINE ++E DNDQ+ GRKL
Sbjct: 121 VQDKQIAQLLSLCGSTLRSPHGCHAQYMANMGTIASLVMSVTINEDDEETDNDQQIGRKL 180
Query: 358 WGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLL 417
WGLVVCHHT+P+FVPFPLRYACEFLIQV GVQV++EVEL+AQ EKHIL+TQTVLCDMLL
Sbjct: 181 WGLVVCHHTNPKFVPFPLRYACEFLIQVLGVQVHREVELAAQTTEKHILQTQTVLCDMLL 240
Query: 418 RDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGL 477
RD+PV IVTQ+PNVMDLVKC+GAAL+YR K W+LGVTPTE QIKDI EWLLEYH STGL
Sbjct: 241 RDAPVAIVTQSPNVMDLVKCNGAALFYRKKFWMLGVTPTEAQIKDITEWLLEYHGESTGL 300
Query: 478 STDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGG 537
STDSL+EAGYPGA L AVCG+AA+KITSKDFLFWFRSH+AKEIKWGGAKHD G KD G
Sbjct: 301 STDSLMEAGYPGAAILRYAVCGMAAIKITSKDFLFWFRSHSAKEIKWGGAKHDPGDKDDG 360
Query: 538 RKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
RKMHPRSSFKAFLEVVK RS+ WEDVEMDAI
Sbjct: 361 RKMHPRSSFKAFLEVVKWRSIAWEDVEMDAI 391
>gi|39753843|gb|AAR30469.1| PHYC [Elatine triandra]
Length = 391
Score = 710 bits (1832), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/391 (83%), Positives = 360/391 (92%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGNI LLCD+LV EV DLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNIPLLCDILVKEVRDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEV+AECR+ DLEPYLG HYPATDIPQASRFL MKNKVRMICDC+A PVKV
Sbjct: 61 VYKFHEDEHGEVIAECRKHDLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCMATPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKL 357
IQDK+L QPLSL GSTLR+PHGCHA+YM NMGSIASLV+SVTINE +D++D DQ GRKL
Sbjct: 121 IQDKRLPQPLSLSGSTLRSPHGCHAQYMANMGSIASLVLSVTINEEDDKIDGDQLLGRKL 180
Query: 358 WGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLL 417
WGLVVCHHT+PRFVPFPLRYACEFLIQVFGVQ+NKEVEL+ Q++EKHILRTQ+VLCDMLL
Sbjct: 181 WGLVVCHHTNPRFVPFPLRYACEFLIQVFGVQINKEVELATQVKEKHILRTQSVLCDMLL 240
Query: 418 RDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGL 477
RD+PV I+TQ+PNVMDLV CDGAALYY+ K WLLGVTP+E QI+DI++WLLE H G+TGL
Sbjct: 241 RDAPVAIITQSPNVMDLVNCDGAALYYKKKFWLLGVTPSEAQIRDISDWLLECHSGNTGL 300
Query: 478 STDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGG 537
STDSL+EAG+PGA LG+AVCG+AA+KITSKDFLFWFRSHTAKEIKWGGAKHD D G
Sbjct: 301 STDSLMEAGFPGASVLGEAVCGMAAIKITSKDFLFWFRSHTAKEIKWGGAKHDPDDNDDG 360
Query: 538 RKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
RKMHPRSSF+AFLEVVK RSLPWEDVEMDAI
Sbjct: 361 RKMHPRSSFRAFLEVVKWRSLPWEDVEMDAI 391
>gi|20530187|gb|AAM27025.1| phytochrome C [Stigmaphyllon puberum]
Length = 392
Score = 710 bits (1832), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/392 (84%), Positives = 362/392 (92%), Gaps = 1/392 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLV EV DLTGYDRV+
Sbjct: 1 DLEPVNPVDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVKEVRDLTGYDRVV 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVV+ECR DLE YLG HYPATDIPQASRFL MKNKVRMICDCLAPPVKV
Sbjct: 61 VYKFHEDEHGEVVSECRISDLESYLGLHYPATDIPQASRFLFMKNKVRMICDCLAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ-GRK 356
IQD++L QPLS CGSTLR+PHGCHA+YM NMG+IASLVMSVTINE +D +D DQ+Q RK
Sbjct: 121 IQDERLPQPLSFCGSTLRSPHGCHAQYMTNMGTIASLVMSVTINEDDDTMDGDQQQMTRK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHH SP+FVPFPLRYACEFLIQVFGVQ+NKEVEL+AQ+REKHIL+ QT+LCDML
Sbjct: 181 LWGLVVCHHNSPQFVPFPLRYACEFLIQVFGVQINKEVELAAQVREKHILQIQTMLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PV I+TQ+PNVMDLVKCDGAALY++ K+WLLGVTP++EQI+DIA+WLLEYH G+TG
Sbjct: 241 LRDAPVAIITQSPNVMDLVKCDGAALYFKNKIWLLGVTPSKEQIRDIAQWLLEYHSGNTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGYPGA ALGDAVCG+AAV ITS+DFLFWFRSHTAK +KWGGAKHD KD
Sbjct: 301 LSTDSLMEAGYPGASALGDAVCGMAAVSITSRDFLFWFRSHTAKAVKWGGAKHDPDDKDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
RKMHPRSSFKAFLEVVK RS+PWEDVEMDAI
Sbjct: 361 LRKMHPRSSFKAFLEVVKWRSMPWEDVEMDAI 392
>gi|224576302|gb|ACN56844.1| phytochrome A [Hesperis sp. MAB-2008]
Length = 577
Score = 710 bits (1832), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/505 (67%), Positives = 407/505 (80%), Gaps = 6/505 (1%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD----NDQEQ 353
QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D Q Q
Sbjct: 121 FQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAQPQ 180
Query: 354 GRK-LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVL 412
RK LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+L
Sbjct: 181 KRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL 240
Query: 413 CDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHR 472
CDML+RD+P+GIVTQ+PN+MDLVKCDGAAL Y+ K+W LG TP+E Q+++IA WL EYH
Sbjct: 241 CDMLMRDAPLGIVTQSPNIMDLVKCDGAALLYKDKVWKLGTTPSEFQLQEIASWLCEYHT 300
Query: 473 GSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSG 532
STGLSTDSL +AG+P AL+LGD+VCG+AAV+I+SKD +FWFRSHTA E++WGGAKHD
Sbjct: 301 DSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPE 360
Query: 533 GKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIV 591
+D R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E + + I+
Sbjct: 361 DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKII 420
Query: 592 NVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQA 651
D +I+ + EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+A
Sbjct: 421 YSKLNDLKIDGMQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEA 480
Query: 652 IGTALVDLVAGDSVDVVKNMLSSAF 676
IG + L+ S+++VK ML +A
Sbjct: 481 IGKHFLALIEDSSLEIVKRMLENAL 505
>gi|89330144|emb|CAJ80984.1| phytochrome A [Striga bilabiata subsp. linearifolia]
Length = 618
Score = 710 bits (1832), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/531 (65%), Positives = 411/531 (77%), Gaps = 14/531 (2%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ LVID EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ L
Sbjct: 1 SGKPFYAIIHRVTGSLVIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSLERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
C+ + EV +LTGYDRVMVYKFHED+HGEV AE RP LEPYLG HYPATDIPQA+RFL
Sbjct: 61 CETMAQEVFELTGYDRVMVYKFHEDDHGEVFAEVTRPGLEPYLGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
MKNKVRMICDC A VKV+QD+ ++LCGSTLRAPH CH RYMENM SIASLVMSV
Sbjct: 121 MKNKVRMICDCHAAHVKVVQDECFSSNVTLCGSTLRAPHSCHLRYMENMNSIASLVMSVV 180
Query: 340 INEAEDE-------LDNDQEQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNK 392
INE DE + ++ ++LWGLVVCHHTSPRFVPFPLRYACEFL QVF + V K
Sbjct: 181 INEGTDEESSASSSSSSHPDKQKRLWGLVVCHHTSPRFVPFPLRYACEFLSQVFSIHVGK 240
Query: 393 EVELSAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLG 452
E+EL Q EK+IL+TQT+LCDMLLR +P+ +VTQ+P VMDLVKCDGA L Y+GK LG
Sbjct: 241 ELELLNQTLEKNILKTQTLLCDMLLRGNPLAVVTQSPTVMDLVKCDGAVLLYKGKNHRLG 300
Query: 453 VTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLF 512
+ P++ Q+ DI WL EYHR STG++TDSL+ AG+PGA ALGDA CG+AAV+IT +D+LF
Sbjct: 301 LAPSDLQVLDIVSWLDEYHRDSTGMTTDSLLGAGFPGAAALGDAFCGMAAVRITGRDWLF 360
Query: 513 WFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQ 572
WFRSHTA E++WGGAK + G +D GRKMHPRSSFKAFLEVVK RS+PW D EMDAIHSLQ
Sbjct: 361 WFRSHTAAEVQWGGAKQEKGVEDDGRKMHPRSSFKAFLEVVKARSVPWRDFEMDAIHSLQ 420
Query: 573 LILRGSLQDEVAEDS--KMIVNVPSVDDRIEKI-----DELRIITNEMVRLIETAAVPIL 625
LILR + E E++ K +V + R+ ++ E+ ++T+EMVRLIETA+VPIL
Sbjct: 421 LILRNACDKEEEEEARRKDMVVAGEIQSRLNELHIDGAKEMEMVTSEMVRLIETASVPIL 480
Query: 626 AVDASGNVNGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
AV G VNGWN+K AELTGL VD AIG + LV SVDVV+ ML A
Sbjct: 481 AVGVDGLVNGWNTKIAELTGLPVDGAIGQKFLALVEESSVDVVRRMLELAL 531
>gi|89331065|emb|CAJ80899.1| phytochrome A [Castilleja rubicundula]
Length = 609
Score = 709 bits (1831), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/523 (65%), Positives = 414/523 (79%), Gaps = 7/523 (1%)
Query: 160 SGKPFYAILHRIDVGLVIDLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLL 219
SGKPFYAI+HR+ G++ID EPV P +VP+TAAGAL+SYKLAAKAI+RLQ+LPSG++ L
Sbjct: 1 SGKPFYAIIHRVTGGMIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQALPSGSMERL 60
Query: 220 CDVLVNEVSDLTGYDRVMVYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLI 279
CD +V EV +LTGYDRVM+YKFH+D+HGEV++E +P L+ Y G HYPATDIPQA+RFL
Sbjct: 61 CDTMVQEVFELTGYDRVMIYKFHDDDHGEVLSEITKPGLDSYAGLHYPATDIPQAARFLF 120
Query: 280 MKNKVRMICDCLAPPVKVIQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVT 339
+KNKVRMICDC A VKVIQD + L+LCGSTLRAPH CH +YMENM SIASLVMSV
Sbjct: 121 IKNKVRMICDCRANHVKVIQDDNIPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVV 180
Query: 340 INEA-EDELDNDQ--EQGRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVEL 396
+NE ED D+ ++ ++LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKE+EL
Sbjct: 181 VNEGNEDGPDSSSHPDKKKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEIEL 240
Query: 397 SAQLREKHILRTQTVLCDMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPT 456
Q+ EK+ILRTQT+LCDMLLRD+P+GI +Q+PNVMDLVKCDGA L ++ K + LG+TP+
Sbjct: 241 ENQMLEKNILRTQTLLCDMLLRDAPLGIESQSPNVMDLVKCDGAVLIHKTKKYRLGMTPS 300
Query: 457 EEQIKDIAEWLLEYHRGSTGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRS 516
+ QI+DI WL EYHR STGLSTDSL +AG+PGALALGDAVCG+AAV+IT D+LFWFRS
Sbjct: 301 DFQIRDIVSWLDEYHRDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITDTDWLFWFRS 360
Query: 517 HTAKEIKWGGAKHDSGGKDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILR 576
HTA EI+WGGAK + KD GRKMHPRSSFKAFL+VVK RS+PW+D EMDAIHSLQLILR
Sbjct: 361 HTASEIRWGGAKREPDDKDDGRKMHPRSSFKAFLDVVKTRSMPWKDFEMDAIHSLQLILR 420
Query: 577 GSLQDEVAE---DSKMIVNVPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNV 633
S E + D K I + D +++ EL +T+EMVRLIETA+VPI AVD G V
Sbjct: 421 NSSNKEAGKRDVDGKEI-HARLNDLQLDGKRELEAVTSEMVRLIETASVPIFAVDVDGLV 479
Query: 634 NGWNSKAAELTGLTVDQAIGTALVDLVAGDSVDVVKNMLSSAF 676
NGWN+K A+LTGL VD+AIG + LV + V ML A
Sbjct: 480 NGWNTKIADLTGLPVDKAIGRHFLALVEDSFAEAVNKMLELAL 522
>gi|13383462|gb|AAK20994.1| phytochrome C [Xanthorhiza simplicissima]
Length = 391
Score = 709 bits (1831), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/391 (83%), Positives = 358/391 (91%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGA+KSYKLAAKAISRLQSLPSGNI++LCDVLV EVSDLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGAMKSYKLAAKAISRLQSLPSGNITVLCDVLVQEVSDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHED+HGEVVAECR P+LEPYLG HYPATDIPQASRFL MKNKVRMICDC A PVKV
Sbjct: 61 VYKFHEDDHGEVVAECRVPELEPYLGLHYPATDIPQASRFLFMKNKVRMICDCSAAPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQGRKL 357
IQD KL QPLSL GS LRAPHGCHA YM NMGS+ASLVMSVTINE +D+++ DQ++GRKL
Sbjct: 121 IQDNKLAQPLSLGGSALRAPHGCHALYMANMGSVASLVMSVTINEDDDQMETDQQKGRKL 180
Query: 358 WGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLL 417
WGL+VCHHT PRFVP+PLRYACEFLIQVFG+Q+NKEVEL+ Q REKHIL+TQTVLCDMLL
Sbjct: 181 WGLLVCHHTRPRFVPYPLRYACEFLIQVFGMQINKEVELATQFREKHILQTQTVLCDMLL 240
Query: 418 RDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGL 477
RD+P+GIVTQ+PN+MDLVKC+G ALYYR + WLLGVTPTE QIKDIAEWLL+YH STGL
Sbjct: 241 RDAPIGIVTQSPNIMDLVKCNGGALYYRSRFWLLGVTPTEAQIKDIAEWLLQYHNASTGL 300
Query: 478 STDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGG 537
STDSL+EAG+PGA LG+ VCG+AA+KIT+KDFLFWFRSHTAKE+KWGGAKH+ KD G
Sbjct: 301 STDSLMEAGFPGASVLGNEVCGMAAIKITTKDFLFWFRSHTAKEVKWGGAKHNPTEKDDG 360
Query: 538 RKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
KMHPRSSFKAFLEVVK RSLPWEDVEMDAI
Sbjct: 361 WKMHPRSSFKAFLEVVKHRSLPWEDVEMDAI 391
>gi|406685297|gb|AFS51089.1| phytochrome P, partial [Taxus wallichiana]
Length = 543
Score = 709 bits (1831), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/492 (70%), Positives = 400/492 (81%), Gaps = 6/492 (1%)
Query: 191 AAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVMVYKFHEDEHGEVV 250
G++ S +LA +A SRLQ++PSG+I LLCD +V EV +LTGYDRVMVYKFHEDEHGEVV
Sbjct: 10 GGGSVPSQRLAVRATSRLQAVPSGDIGLLCDTVVEEVRELTGYDRVMVYKFHEDEHGEVV 69
Query: 251 AECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKVIQDKKLDQPLSLC 310
AE RR DLEPYLG HYPATDIPQASRFL M+N+VRMICDC A PVKVIQ +L QPL L
Sbjct: 70 AEIRRSDLEPYLGLHYPATDIPQASRFLFMQNRVRMICDCRATPVKVIQSGELKQPLCLV 129
Query: 311 GSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ-----EQGRKLWGLVVCHH 365
GSTLRAPHGCHA+YM NMGSIASLVM+V +N + D D KLWGLVVCHH
Sbjct: 130 GSTLRAPHGCHAQYMANMGSIASLVMAVIVNGNGNGNDEDGGGGSGRSSMKLWGLVVCHH 189
Query: 366 TSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDMLLRDSPVGIV 425
TSPR VPFPLR ACEFL+Q FG+Q+N E++L+AQL E +ILRTQT+LCDMLLRD+P+GIV
Sbjct: 190 TSPRAVPFPLRSACEFLMQTFGLQINMELQLAAQLIENNILRTQTLLCDMLLRDAPIGIV 249
Query: 426 TQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTGLSTDSLVEA 485
TQ+P++MDLVKCDGAALYY G WLLGVTP E QIKDIAEWLLE H STGLSTDSL +A
Sbjct: 250 TQSPSIMDLVKCDGAALYYGGMCWLLGVTPMEAQIKDIAEWLLECHGDSTGLSTDSLADA 309
Query: 486 GYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDGGRKMHPRSS 545
GYPGA +LGDAVCG+AA +ITSKDFLFWFRSHTAKE+KWGGAKH KD GR+MHPRSS
Sbjct: 310 GYPGAASLGDAVCGMAAARITSKDFLFWFRSHTAKEMKWGGAKHHPDDKDDGRRMHPRSS 369
Query: 546 FKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQDEVAEDSKMIVNVPSVDDRIEKIDE 605
FKAFLEVVK+RSLPWE+VEMDAIHSL+LILRGS QD D+K +V+ D +++ IDE
Sbjct: 370 FKAFLEVVKRRSLPWENVEMDAIHSLRLILRGSFQDIDDSDTKTMVHARLNDLKLQGIDE 429
Query: 606 LRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAIGTALV-DLVAGDS 664
L + +EMVRLIETA PILAVD+SG VNGWN+K ELTGL V +A+G +LV DLV +S
Sbjct: 430 LSSVASEMVRLIETATAPILAVDSSGIVNGWNAKVGELTGLPVGEAMGKSLVHDLVFDES 489
Query: 665 VDVVKNMLSSAF 676
V+ V+ ML A
Sbjct: 490 VETVEKMLYHAM 501
>gi|345424402|gb|AEN85305.1| phytochrome A, partial [Erucaria hispanica]
Length = 598
Score = 709 bits (1831), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/504 (66%), Positives = 411/504 (81%), Gaps = 5/504 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELD----NDQEQ 353
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D ++
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTTPQK 180
Query: 354 GRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
++LWGLVVCH+TSPRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GI++Q+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P ALALGD+VCG+AAV+I+S+D +FWFRSHTA E++WGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALALGDSVCGMAAVRISSRDMIFWFRSHTAGEVRWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
KD R+MHPRSSFKAFLEVVK RSLPW+D EMDAIHSLQLILR + +D E A+ + I++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGESADMNTKIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G +NGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLINGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAF 676
G L+ LV SV++VK ML +A
Sbjct: 481 GKHLLTLVEDSSVEIVKRMLENAL 504
>gi|345424324|gb|AEN85266.1| phytochrome A, partial [Crambella teretifolia]
Length = 598
Score = 709 bits (1831), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/504 (66%), Positives = 411/504 (81%), Gaps = 5/504 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
D EPV P +VP+TAAGAL+SYKLAAKAI+RLQSLPSG++ LCD +V EV +LTGYDRVM
Sbjct: 1 DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
YKFH+D+HGEVV+E +P LEPYLG HYPATDIPQA+RFL MKNKVRMI DC A V+V
Sbjct: 61 AYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVRV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQ----EQ 353
+QD+KL L+LCGSTLRAPH CH +YM NM SIASLVM+V +NE + E D ++
Sbjct: 121 LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDGPDSTTPQK 180
Query: 354 GRKLWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLC 413
++LWGLVVCH+T+PRFVPFPLRYACEFL QVF + VNKEVEL Q+ EK+ILRTQT+LC
Sbjct: 181 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLC 240
Query: 414 DMLLRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRG 473
DML+RD+P+GI++Q+PN+MDLVKCDGAAL Y+ K+W LG+TP++ +++IA WL EYH
Sbjct: 241 DMLMRDAPLGIISQSPNIMDLVKCDGAALLYKDKVWKLGITPSDFHLQEIASWLCEYHTD 300
Query: 474 STGLSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGG 533
STGLSTDSL +AG+P AL+LGD+VCG+AAV+I+SKD +FWFRSHTA E+KWGGAKHD
Sbjct: 301 STGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAAEVKWGGAKHDPDD 360
Query: 534 KDGGRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAIHSLQLILRGSLQD-EVAEDSKMIVN 592
KD R+MHPRSSFKAFLEVVK+RSLPW+D EMDAIHSLQLILR + +D E + + I++
Sbjct: 361 KDDARRMHPRSSFKAFLEVVKRRSLPWKDYEMDAIHSLQLILRNAFKDGETTDMNTKIIH 420
Query: 593 VPSVDDRIEKIDELRIITNEMVRLIETAAVPILAVDASGNVNGWNSKAAELTGLTVDQAI 652
D +I+ I EL +T+EMVRLIETA VPILAVD+ G VNGWN+K AELTGL VD+AI
Sbjct: 421 SKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLPVDEAI 480
Query: 653 GTALVDLVAGDSVDVVKNMLSSAF 676
G L+ LV SV++VK ML +A
Sbjct: 481 GKHLLALVEDSSVEIVKRMLENAL 504
>gi|21070013|gb|AAM34165.1| phytochrome C [Gallardoa fischeri]
Length = 392
Score = 709 bits (1831), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/392 (84%), Positives = 361/392 (92%), Gaps = 1/392 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLV EV DLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVKEVRDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVV+ECRR DLE YLG HYPATDIPQASRFL MKNKVRMICDCLAPPVKV
Sbjct: 61 VYKFHEDEHGEVVSECRRSDLESYLGLHYPATDIPQASRFLFMKNKVRMICDCLAPPVKV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ-GRK 356
IQD++L QPLSLCGSTLR+PHGCHA+YM NMG+IASL MSVT+NE +D +D DQ Q RK
Sbjct: 121 IQDEQLPQPLSLCGSTLRSPHGCHAQYMTNMGTIASLGMSVTVNEDDDMMDGDQHQMTRK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTSPRFVPFPLRYACEFLIQV GVQ+NKEVEL+AQ+R+KHIL+ QT+LCDML
Sbjct: 181 LWGLVVCHHTSPRFVPFPLRYACEFLIQVCGVQINKEVELAAQVRKKHILQIQTMLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PV I+TQ+PNVMDLVKCDGAALY++ K+WLLGVTPTEEQI+DIAEWLL+YH G+TG
Sbjct: 241 LRDAPVAIITQSPNVMDLVKCDGAALYFKNKIWLLGVTPTEEQIRDIAEWLLKYHSGNTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGYPGA ALGDAVCG+AAV ITS+D LFWFRSHTAKEIKWGGAKHD KD
Sbjct: 301 LSTDSLMEAGYPGASALGDAVCGMAAVSITSRDLLFWFRSHTAKEIKWGGAKHDPDDKDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
RKMHPRSSFKAFLEVVK RS PW+DVEMDAI
Sbjct: 361 LRKMHPRSSFKAFLEVVKWRSKPWKDVEMDAI 392
>gi|21070067|gb|AAM34192.1| phytochrome C [Dinemandra ericoides]
Length = 392
Score = 709 bits (1831), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/392 (85%), Positives = 364/392 (92%), Gaps = 1/392 (0%)
Query: 178 DLEPVNPDDVPVTAAGALKSYKLAAKAISRLQSLPSGNISLLCDVLVNEVSDLTGYDRVM 237
DLEPVNP DVPVTAAGALKSYKLAAKAISRLQSLPSGNI LLCDVLV EV DLTGYDRVM
Sbjct: 1 DLEPVNPADVPVTAAGALKSYKLAAKAISRLQSLPSGNIPLLCDVLVKEVRDLTGYDRVM 60
Query: 238 VYKFHEDEHGEVVAECRRPDLEPYLGFHYPATDIPQASRFLIMKNKVRMICDCLAPPVKV 297
VYKFHEDEHGEVV+ECRR D+E YLG HYPATDIPQASRFL MKNKVRMICDCL+PPV+V
Sbjct: 61 VYKFHEDEHGEVVSECRRSDMESYLGLHYPATDIPQASRFLFMKNKVRMICDCLSPPVEV 120
Query: 298 IQDKKLDQPLSLCGSTLRAPHGCHARYMENMGSIASLVMSVTINEAEDELDNDQEQ-GRK 356
IQD++L QPLSLCGSTLR+PHGCHA+YM NMG+IASLVMSVT+NE +D +D DQ++ RK
Sbjct: 121 IQDERLPQPLSLCGSTLRSPHGCHAQYMANMGTIASLVMSVTVNEDDDMMDGDQQRMARK 180
Query: 357 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQVNKEVELSAQLREKHILRTQTVLCDML 416
LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQ+NKEV+L+AQ+REKHILR QT+LCDML
Sbjct: 181 LWGLVVCHHTSPRFVPFPLRYACEFLIQVFGVQINKEVDLAAQVREKHILRIQTMLCDML 240
Query: 417 LRDSPVGIVTQTPNVMDLVKCDGAALYYRGKLWLLGVTPTEEQIKDIAEWLLEYHRGSTG 476
LRD+PV I+TQ+PNVMDLVKCDGAALYY+ K WLLGVTPTE QI+DIAEWLLEYHRG+TG
Sbjct: 241 LRDAPVAIITQSPNVMDLVKCDGAALYYKNKFWLLGVTPTEAQIRDIAEWLLEYHRGNTG 300
Query: 477 LSTDSLVEAGYPGALALGDAVCGIAAVKITSKDFLFWFRSHTAKEIKWGGAKHDSGGKDG 536
LSTDSL+EAGYPGA LGDAVC +AAV ITS+DFLFWFRSHTAKEIKWGGAKHD G KD
Sbjct: 301 LSTDSLMEAGYPGASVLGDAVCRMAAVSITSRDFLFWFRSHTAKEIKWGGAKHDPGDKDD 360
Query: 537 GRKMHPRSSFKAFLEVVKQRSLPWEDVEMDAI 568
GRKMHPRSSFKAFLEVVK RSLPWED+EMDAI
Sbjct: 361 GRKMHPRSSFKAFLEVVKWRSLPWEDMEMDAI 392
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.134 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,349,502,801
Number of Sequences: 23463169
Number of extensions: 436034097
Number of successful extensions: 1187708
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 4958
Number of HSP's successfully gapped in prelim test: 291
Number of HSP's that attempted gapping in prelim test: 1171614
Number of HSP's gapped (non-prelim): 6472
length of query: 681
length of database: 8,064,228,071
effective HSP length: 150
effective length of query: 531
effective length of database: 8,839,720,017
effective search space: 4693891329027
effective search space used: 4693891329027
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 81 (35.8 bits)