Query 005724
Match_columns 681
No_of_seqs 257 out of 855
Neff 8.9
Searched_HMMs 46136
Date Thu Mar 28 12:48:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005724.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/005724hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2001 Gamma-tubulin complex, 100.0 3.5E-99 8E-104 790.8 60.1 636 10-659 71-715 (734)
2 KOG2065 Gamma-tubulin ring com 100.0 4.8E-76 1E-80 589.2 43.9 591 35-681 1-665 (679)
3 PF04130 Spc97_Spc98: Spc97 / 100.0 8.5E-68 1.8E-72 599.4 46.8 505 38-564 1-542 (542)
4 KOG2000 Gamma-tubulin complex, 100.0 6.7E-53 1.4E-57 468.5 38.1 519 29-591 201-762 (879)
5 KOG4344 Uncharacterized conser 100.0 9.1E-27 2E-31 242.0 36.0 609 30-677 290-1113(1121)
6 PF14609 GCP5-Mod21: gamma-Tub 52.2 1.5E+02 0.0032 32.4 10.8 64 28-105 178-245 (653)
7 PF13060 DUF3921: Protein of u 22.1 1.5E+02 0.0032 21.2 3.4 46 520-565 5-51 (58)
8 PF09164 VitD-bind_III: Vitami 21.7 1.2E+02 0.0026 23.3 3.1 40 529-571 8-57 (68)
9 KOG2000 Gamma-tubulin complex, 21.6 1.4E+02 0.003 35.7 5.2 121 437-566 589-711 (879)
10 PLN00032 DNA-directed RNA poly 20.5 1.1E+02 0.0024 24.0 2.8 46 524-570 10-55 (71)
No 1
>KOG2001 consensus Gamma-tubulin complex, DGRIP84/SPC97 component [Cytoskeleton]
Probab=100.00 E-value=3.5e-99 Score=790.81 Aligned_cols=636 Identities=44% Similarity=0.707 Sum_probs=546.1
Q ss_pred hhhc-ccCCcccccCCCCCccchHHHHHHHHHHHhcCCCCCceeeecccccCCCCCCCCCccceEecCCCCHHHHHHHHH
Q 005724 10 FADS-FSNNGAEMAIGCYDAGVQELLVIDDLLSALVGIEGRYISIKRRVNHVHGNDTYDSTVTFQVDASMDLALQEMAKR 88 (681)
Q Consensus 10 ~~~~-~~~~~~~~~~~~~~~~~~E~~lv~dlL~~L~G~~g~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~sl~~l~~~ 88 (681)
|-+. +.+.....+++.+|...||..+++|+++++.|++|.|+++..-.-+..+... .....|.|.|+.+-+++.++++
T Consensus 71 ~~~~~~~~~~~~~~is~~~lp~QE~~li~dLl~af~Gv~~ryV~~Q~~~~s~~~~~~-~~~~~F~v~~~fd~~ir~la~e 149 (734)
T KOG2001|consen 71 ILEGVGIDYFTDYEISDMPLPSQESKLIDDLLYAFVGVEGRYVSPQYMIISEAYEKW-IDSIFFMVLPRFDLAIRELAEE 149 (734)
T ss_pred hhhccccccccccCcccCCchhHHHHHHHHHHHHHcCCCcceeecchhhhhhhhhhh-ccCcceeeccchhHHHHHHHHH
Confidence 3344 3566777888899999999999999999999999999998551110000000 1357899999999999999999
Q ss_pred HHHHHhHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcHHHHHHhhhhHHHHHHHHHHHH
Q 005724 89 IFPLCESFVLTGQFVESRSQFKNGLVNHAFAASLRALLLDYEAMVAQLEHQFRLGRLSIQGLWFYCQPMLGSMQAVSAVI 168 (681)
Q Consensus 89 ll~~g~~~~~l~~fv~~~~~~~~g~~~~Al~~~l~~~L~~y~~~i~~lE~~~~~~~lsL~~L~~~~~~~~~~l~~L~~iv 168 (681)
++|+|.+|..+++||+.++.+..|.|.+|+|+|+++.+.+|+..|.++|++.+.+.+|+++||++++|+...|+.++..+
T Consensus 150 ilpl~~yy~~v~~fie~~s~f~~G~vn~alaaAlr~ll~dyy~li~qlE~e~R~~~lslq~L~~y~qP~m~~m~~l~~~~ 229 (734)
T KOG2001|consen 150 ILPLASYYLLVQDFIEETSFFEYGQVNHALAAALRELLYDYYELISQLEQELRTNRLSLQDLWFYMQPMMRSMRRLAVAA 229 (734)
T ss_pred HHHHHHHHHHHHHHHhccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHhhhHHHHHHHHHHH
Confidence 99999999999999999988899999999999999999999999999999999999999999999999999999998888
Q ss_pred HHhhcCCCchhhHHHHHHHHHHHccCChHHHHHHHHHHHHHhHHHHHHHHHHHhhceecCCCCcceeeeCcccccccccc
Q 005724 169 HKASANNFTGSAVLNLLQSQAKAMAGDNTVRSLLEKMTQCASNAYLGILERWVYEGVIDDPYGEFFIAEDKSLLKESLTQ 248 (681)
Q Consensus 169 ~~~~~~~~~g~~lL~~L~~~~~~~~g~~~~~~~l~~ll~~~~~p~~~~l~~Wl~~G~l~D~~~EFfI~~~~~~~~~~l~~ 248 (681)
+.+..+.++||.+|+.|++++..+.||+..+.++.++++.+++||++|+++|+..|.++|||+||||..+ ...++.+++
T Consensus 230 ~~~~~~~~~gg~vls~l~~~~~~~~Gd~~a~~ll~~l~r~as~~Y~~mLe~Wi~~Gii~Dpy~EFmi~d~-~~~k~~l~e 308 (734)
T KOG2001|consen 230 TTTVKKVCKGGAVLSLLQSSIKENLGDRSARMLLKKLLRNASQPYCTMLEEWIYQGIINDPYQEFMIYDN-LITKEDLPE 308 (734)
T ss_pred hhhhccccCchHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhcchHHHHHHHHHhcccccCchHhHhhhhc-chhhhcCch
Confidence 8888789999999999999998899999999999999999999999999999999999999999999999 667778889
Q ss_pred ccchhhhhccccc-ccCCCcchHHHHHHHHHhhhHHHHHHHhcCCCCCCCccccccc-ccCCccchHHHHHHHHHHHHHH
Q 005724 249 DYDAKYWRQRYSL-KDGIPSFLANIAGKILTTGKYLNVMRECGHSAQVPTSENSKLL-SFGSNHHYLECVKVAYEFASGE 326 (681)
Q Consensus 249 ~~~~~~W~~~y~l-~~~vP~Fl~~~a~~Il~~GK~l~~Lr~~~~~~~~p~~e~~~~~-~f~~~~~~~~~I~~~~~~~s~~ 326 (681)
|+.++||+++|+| +|.+|+|+.+.|+|||.||||+|++|+|++.++.|...+.... ....+..+.+.|+++|..+|..
T Consensus 309 d~~d~YW~~RY~ir~dqiP~fL~~~adkIL~tGKYLNVvReC~~~v~~p~~~n~~~~~~~~~e~~~~e~I~~ay~~A~~~ 388 (734)
T KOG2001|consen 309 DYTDKYWDQRYTIRKDQIPGFLLSEADKILRTGKYLNVVRECGKIVTIPQSSNEINDPADLMESNHEEYIKKAYEFANEI 388 (734)
T ss_pred hhhHHHHHHhheechhhcchHHHHHHHHHHHhhhHHHHHHHhCccCCCCcchhhhccccccchhhHHHHHHHHHHHHHHH
Confidence 9999999999999 7899999999999999999999999999999887765432111 1223478899999999999999
Q ss_pred HHHHHHhhccHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCcccCHHHHHHHHHHHHH-hhhcccCCCCCccceee
Q 005724 327 LLNLIKERYDLMGKLRSIKRYLLLDQGDFLVHFMDIAREELMKQLDEITVEKLQSLLDIALR-STAAAADPCHEDLTCSV 405 (681)
Q Consensus 327 l~~ll~~~~~L~~hL~~l~~~fLL~~Gdf~~~f~~~l~~~L~~~~~~~~~~~L~~~l~~al~-~s~~~~d~~~~~l~~~~ 405 (681)
++++++++++|..||+.+|+||||.+|||+.+|+|.+.++|.|+.+.+++.+|+++|+.|++ .+.+.+||++++++|.+
T Consensus 389 lL~ll~~e~dL~~hLrslK~YfLldQgdF~~~Fld~~~eEL~K~v~~i~p~kLqsLL~laLr~~s~a~~Dp~k~~L~i~~ 468 (734)
T KOG2001|consen 389 LLKLLFEEYDLVGHLRSLKHYFLLDQGDFFVTFLDKAEEELTKNVENISPEKLQSLLDLALREQSEAANDPMKEDLKICV 468 (734)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhcchhhcCHHHHHHHHHHHHHhhhcccCCchhhheeeee
Confidence 99999999999999999999999999999999999999999999999999999999999999 77778999999999999
Q ss_pred ccccHHHHHHhhhccccccCCCCCCCCCC---CCCcccceEEeeeecCCCcceeechHHHHHHHHHHHHHHHHHHHHHHH
Q 005724 406 ERSSLLKRMATLKGVEIKTSSDSVDLEQP---VSITGLETFSLSYKVQWPLSIVISRKALTKYQMVFRLLFHCKHVERQL 482 (681)
Q Consensus 406 ~~~~l~~~l~~~~~l~~~~~~~~~~~~~~---~~~~~~d~l~L~Y~v~wPL~liit~~~l~~Y~~iFr~Ll~lk~~~~~L 482 (681)
.+.+++.++..+-.++...- +++...+| .++.|++.+.++|+|||||++||++++|.|||.|||+++.||++++.|
T Consensus 469 ~~~~L~~ql~~~l~ie~~e~-~ans~~dP~~~l~lsGlE~faf~Y~vkwPLSlIIsrkal~kYQmLfR~lf~lkhVerqL 547 (734)
T KOG2001|consen 469 DPTDLITQLSHILAIEPEEE-SANSQADPLEHLDLSGLEAFAFDYEVKWPLSLIISRKALIKYQMLFRYLFYLKHVERQL 547 (734)
T ss_pred cHhhHHHHHHHHHhcCcccc-ccccccCcchhccccchhhheeeeccCCceeeeEcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999887644432111 11112233 578999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhccccCCch-hhHHhHHHHHHHHHHHHHHHHHHHhhhcccccHHHHHHHhccCCCHHHHHHHHHHHHHHHHH
Q 005724 483 CGAWQVHQGARAFNASG-TAISRSSLLCRSMLKFINSLLHYLTFEVLEPNWHVMHNRLQTAKSIDEVIQHHDFFLDKCLR 561 (681)
Q Consensus 483 ~~~w~~~~~~r~~~~~~-~~~~~~~~lr~~m~~Fv~~l~~Y~~~~VIe~~~~~~~~~l~~a~~ld~l~~~H~~fL~~i~~ 561 (681)
+.+|..++..|..+..+ ++.+.++.+|++|++||+++.+|++.+||||+|..|++.+++++++|+++..|+.|||.|++
T Consensus 548 ~~~W~~~~~~r~~~~~~~q~~r~s~~LR~RMl~fiqsi~~Y~~~eViEp~W~~l~~~l~~a~~vD~Vl~~he~fld~CLk 627 (734)
T KOG2001|consen 548 CETWQSHSKARSSNTKGAQIVRASFLLRQRMLNFIQSIEYYMTQEVIEPNWHSLEKCLKNARNVDEVLNEHEGFLDTCLK 627 (734)
T ss_pred HHHHHhhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHhhchhhHHHHHHHHHHHHHHHHH
Confidence 99999998877666543 45678899999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCh-HHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCChhHHHHHHhhhhhhhhhhhhhhhhHHHHHH
Q 005724 562 ECLLHLP-DLLKKVERLKSLCLQYAAATQWLISSSIDLPKLEEPSDGFSGSEKFKRLKLRSLSQVQKVMIRDATVTESIL 640 (681)
Q Consensus 562 ~cfL~~~-~l~~~l~~il~~~~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 640 (681)
.|+|+.+ .+++.+.++..+|+.||..++.+++.. .-++.....+. | .+..+ +.+.+.+ --+.+.+.+.
T Consensus 628 ~ClL~~~~~llk~~~kL~~vCl~f~~~~q~~~~~~---~~~~~~~~~~~-~-~~d~~--~k~~~t~----li~~leei~~ 696 (734)
T KOG2001|consen 628 RCLLTLSPLLLKSFSKLYKVCLMFCSFTQKLTQSD---PTDEEKNSVGH-P-QFDEG--RKEDDTL----LISKLEEIIS 696 (734)
T ss_pred hhccCChHHHHHHHHHHHHHHHHHHHHHHHHhccc---chhhhhccccc-c-chhhh--hhhhhHH----HHHHHHHHHH
Confidence 9999986 789999999999999999999887421 00111010110 0 11111 1111111 0223455677
Q ss_pred HHHHHHHHHHHhHHHHhcc
Q 005724 641 KFEREFNNELQSLGPILSS 659 (681)
Q Consensus 641 ~~~~~F~~~~~~l~~~l~~ 659 (681)
.++..|++++..|+..|++
T Consensus 697 ~~~~~f~~~l~~L~~rlsk 715 (734)
T KOG2001|consen 697 NADKNFRDCLKNLLQRLSK 715 (734)
T ss_pred HhHHHHHHHHHHHHHHccc
Confidence 7999999999999999994
No 2
>KOG2065 consensus Gamma-tubulin ring complex protein [Cytoskeleton]
Probab=100.00 E-value=4.8e-76 Score=589.25 Aligned_cols=591 Identities=22% Similarity=0.344 Sum_probs=463.0
Q ss_pred HHHHHHHHhcCCCCCceeeecccccCCCCCCCCCccceEecCCCCHHHHHHHHHHHHHHhHHHHHHHHh---hhcc----
Q 005724 35 VIDDLLSALVGIEGRYISIKRRVNHVHGNDTYDSTVTFQVDASMDLALQEMAKRIFPLCESFVLTGQFV---ESRS---- 107 (681)
Q Consensus 35 lv~dlL~~L~G~~g~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~sl~~l~~~ll~~g~~~~~l~~fv---~~~~---- 107 (681)
|++|||.||.|++|..|.++.+.+ |-... .. ++.-++|++++++++++++|..|+.+.+|. ++..
T Consensus 1 MiHeLLLAl~g~~g~~~~~~~R~~---GLa~~---~d--~p~FihPsEr~i~~rliklg~~Y~e~~rFtswIrsvTsH~~ 72 (679)
T KOG2065|consen 1 MIHELLLALRGHNGEQLGIKARFN---GLAET---TD--IPQFIHPSEREIFMRLIKLGKVYQEVERFTSWIRSVTSHSS 72 (679)
T ss_pred CHHHHHHHHhCCChhheeehhhcc---ccccc---cC--CccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcc
Confidence 689999999999999999887432 22111 11 122467899999999999999998888876 2221
Q ss_pred -----------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CCCcHHHHHHhhhhHHHHHHHHHHHHHHhhcCC
Q 005724 108 -----------QFKNGLVNHAFAASLRALLLDYEAMVAQLEHQFRL-GRLSIQGLWFYCQPMLGSMQAVSAVIHKASANN 175 (681)
Q Consensus 108 -----------~~~~g~~~~Al~~~l~~~L~~y~~~i~~lE~~~~~-~~lsL~~L~~~~~~~~~~l~~L~~iv~~~~~~~ 175 (681)
..-+|.|..|+|.+|..+|++|+..|..+|+.+.. .+.||+.++..+......+..+..++.++...+
T Consensus 73 ~r~~~~s~q~~~~lhg~Ylra~a~Gi~~~L~~Yr~ail~lEq~~Lg~~~~sls~V~~~L~~ff~Lfp~~~~vi~eI~~~~ 152 (679)
T KOG2065|consen 73 GRKSDTSGQLPDSLHGYYLRALAKGIEMALEEYRAAILRLEQYCLGNERNSLSYVYNALYAFFPLFPFMRNVITEIHVLN 152 (679)
T ss_pred cccccccccCCCccchHHHHHHHhhHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHhhhhhHHHHHHHHHHHhcc
Confidence 12378999999999999999999999999999765 468999998888888889999999999998889
Q ss_pred CchhhHHHHHHHHHHHccCChHHHHHHHHHHHHHhHHHHHHHHHHHhhceecCCCCcceeeeCcc--ccccccccccchh
Q 005724 176 FTGSAVLNLLQSQAKAMAGDNTVRSLLEKMTQCASNAYLGILERWVYEGVIDDPYGEFFIAEDKS--LLKESLTQDYDAK 253 (681)
Q Consensus 176 ~~g~~lL~~L~~~~~~~~g~~~~~~~l~~ll~~~~~p~~~~l~~Wl~~G~l~D~~~EFfI~~~~~--~~~~~l~~~~~~~ 253 (681)
.+||+||+.||++ ++|.|.+|..+.+++..|..+++.++..||.+|.+.|+++||||+..+. ++.++.++...++
T Consensus 153 irGcqlL~~l~k~---HCg~p~ir~~l~~~l~~~h~vmy~qLaaWml~Gvl~D~H~EFFIK~q~~~~~d~ss~~ee~~e~ 229 (679)
T KOG2065|consen 153 IRGCQLLHNLHKQ---HCGHPDIRLELAIKLKPVHNVMYSQLAAWMLFGVLDDVHSEFFIKFQPTDAVDGSSFSEEATES 229 (679)
T ss_pred cchhHHHHHHHHh---ccCCCcHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccchheEEeccCCCCCCcccCchhhhhh
Confidence 9999999999986 5899999999999999999999999999999999999999999995442 1111110000000
Q ss_pred hh-----------hccccc-----ccCCCcchHH-HHHHHHHhhhHHHHHHHhcCCC-------CCCCccc---c-----
Q 005724 254 YW-----------RQRYSL-----KDGIPSFLAN-IAGKILTTGKYLNVMRECGHSA-------QVPTSEN---S----- 301 (681)
Q Consensus 254 ~W-----------~~~y~l-----~~~vP~Fl~~-~a~~Il~~GK~l~~Lr~~~~~~-------~~p~~e~---~----- 301 (681)
.- -..|.+ -...|.|.+- .+.++|.+|+...+.+.-.... ..|..+. .
T Consensus 230 L~vhsLTgi~l~~l~D~rl~~E~nm~a~~~~~sl~~~s~~l~v~~~~s~~~~~R~~~~i~F~~~~~~~~e~eld~dlt~G 309 (679)
T KOG2065|consen 230 LLVHSLTGIALKNLEDYRLQYEVNMSALPGFFSLVLASKVLFVGQTVSVFKMGRNVKVINFKTDPLAAKEAELDSDLTYG 309 (679)
T ss_pred hhhcccchhhhhchhhhhHHHHHhhhccccceeeeccccceeeccchHHHhhccceeeeeccCCchhhHHhhccccchhh
Confidence 00 012333 1246778777 8899999999888877432111 1111111 0
Q ss_pred cccccCC-----------------ccchHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhcCCcchHHHHHHHHH
Q 005724 302 KLLSFGS-----------------NHHYLECVKVAYEFASGELLNLIKERYDLMGKLRSIKRYLLLDQGDFLVHFMDIAR 364 (681)
Q Consensus 302 ~~~~f~~-----------------~~~~~~~I~~~~~~~s~~l~~ll~~~~~L~~hL~~l~~~fLL~~Gdf~~~f~~~l~ 364 (681)
.+.+=.+ ...|...|+..++.|+.+||++.+++.+|.+||+++|+|||||+|||+..|++.+.
T Consensus 310 ~ll~~~Ed~f~aml~dLk~~~~f~~~~fE~vVd~ir~~va~hLw~l~V~e~DL~gqlk~iKDffLLgrGeffq~F~~~~~ 389 (679)
T KOG2065|consen 310 QLLSGREDEFFAMLVDLKNEDTFNVFRFEKVVDDIRNYVAAHLWELAVNEVDLEGQLKLIKDFFLLGRGEFFQEFCSQMV 389 (679)
T ss_pred hhcCCChHHHHHHHHhhhcCCceeeeeHHHHHHHHHHHHHHHHHHHHHhHHhHHhHHHHHHHHHHhcccHHHHHHHHHHH
Confidence 0110000 03567789999999999999999999999999999999999999999999999999
Q ss_pred HHHhccCcccCHHHHHHHHHHHHHhhhcccCCCCCccceeeccccHHHHHHhhhccccccCCCCCCCCCCCCCcccceEE
Q 005724 365 EELMKQLDEITVEKLQSLLDIALRSTAAAADPCHEDLTCSVERSSLLKRMATLKGVEIKTSSDSVDLEQPVSITGLETFS 444 (681)
Q Consensus 365 ~~L~~~~~~~~~~~L~~~l~~al~~s~~~~d~~~~~l~~~~~~~~l~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~d~l~ 444 (681)
..|+.|++....++++..++.|...+....|.+-+.++..+....=.... +..+.+ ++........+..|||++.
T Consensus 390 ~~m~tpp~~~tE~dv~v~FqlaAtkt~~~dDkyl~~~sL~~~~~grs~~a---D~~~~~--tGka~ltsdtsvdGWdAl~ 464 (679)
T KOG2065|consen 390 GTMETPPEERTEKDVTVSFQLAATKTGITDDKYLDKFSLICQRSGRSEPA---DTSDFN--TGKAFLTSDTSVDGWDALS 464 (679)
T ss_pred HHhhCCchhhcccccchhhhhhhhhccccccccccceEEEecccCCCCcc---chhhhc--cCcccccCCCCccchhhhc
Confidence 99999998888788888899888776666776666666555433200000 000001 1111122345679999999
Q ss_pred eeeecCCCcceeechHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc----ccCCchhhHHhHHHHHHHHHHHHHHHH
Q 005724 445 LSYKVQWPLSIVISRKALTKYQMVFRLLFHCKHVERQLCGAWQVHQGAR----AFNASGTAISRSSLLCRSMLKFINSLL 520 (681)
Q Consensus 445 L~Y~v~wPL~liit~~~l~~Y~~iFr~Ll~lk~~~~~L~~~w~~~~~~r----~~~~~~~~~~~~~~lr~~m~~Fv~~l~ 520 (681)
|.|+|.|||+++|||.++++||.||+||+++||+++.|+++|...+... .-.+.++.++ |++|+.|.+|++|+|
T Consensus 465 L~Y~v~WPl~llFtp~~~e~yn~VF~yLl~irr~Q~Elq~~WA~qm~r~h~~s~q~~d~~~I~--WRlRnhmaFl~~NlQ 542 (679)
T KOG2065|consen 465 LKYEVEWPLNLLFTPTTIERYNNVFRYLLIIRRYQYELQRVWAKQMWRAHSASDQPPDNKIIT--WRLRNHMAFLLNNLQ 542 (679)
T ss_pred eeeEeccchheeechhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCccch--HHHHHHHHHHHhhhh
Confidence 9999999999999999999999999999999999999999998765321 1111122232 899999999999999
Q ss_pred HHHhhhcccccHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCC
Q 005724 521 HYLTFEVLEPNWHVMHNRLQTAKSIDEVIQHHDFFLDKCLRECLLHLPDLLKKVERLKSLCLQYAAATQWLISSSIDLPK 600 (681)
Q Consensus 521 ~Y~~~~VIe~~~~~~~~~l~~a~~ld~l~~~H~~fL~~i~~~cfL~~~~l~~~l~~il~~~~~F~~~~~~~~~~~~~~~~ 600 (681)
+|+++||||++|..++..|+...||+.|+.+|+.||.+++.+|||...++..++.+|+++|.+||+++..-. .
T Consensus 543 yYiQVDVlESQf~~L~~~I~s~~DFe~i~~aH~~fLsnllsqsFll~~pV~~~L~~i~~lC~~Fcn~~~Q~~------~- 615 (679)
T KOG2065|consen 543 YYIQVDVLESQFGILMNVIKSRSDFEVIQRAHTVFLSNLLSQSFLLNEPVYGTLLKIFGLCEKFCNHMTQTK------D- 615 (679)
T ss_pred eeeeehhHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhccC------C-
Confidence 999999999999999999999999999999999999999999999999999999999999999998764211 0
Q ss_pred CCCCCCCCCChhHHHHHHhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHHHhcccccccchHHHHHHHHhccCCC
Q 005724 601 LEEPSDGFSGSEKFKRLKLRSLSQVQKVMIRDATVTESILKFEREFNNELQSLGPILSSSSQAEPYLTHLAQLVLGVGFD 680 (681)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~F~~~~~~l~~~l~~~~~~~~~~~~L~~ll~rld~n 680 (681)
+ .+...++++.+.+.|.++...|+++|++. ++....+.|+|||+|||||
T Consensus 616 P------------------------------~d~~~~el~~l~e~F~~qs~sL~~iL~sv-k~~q~~~~L~qlLLRLdfN 664 (679)
T KOG2065|consen 616 P------------------------------SDDLEDELDQLNESFGVQSASLIQILVSV-KSAQCLGPLSQLLLRLDFN 664 (679)
T ss_pred C------------------------------cccchHHHHHHHHHhhhhHHHHHHHHHHc-cccccccHHHHHHHHhchh
Confidence 0 11124678999999999999999999996 7889999999999999999
Q ss_pred C
Q 005724 681 K 681 (681)
Q Consensus 681 ~ 681 (681)
+
T Consensus 665 ~ 665 (679)
T KOG2065|consen 665 C 665 (679)
T ss_pred H
Confidence 6
No 3
>PF04130 Spc97_Spc98: Spc97 / Spc98 family; InterPro: IPR007259 Members of this family are spindle pole body (SBP) components such as Spc97, Spc98 and gamma-tubulin. The SPB functions as the microtubule-organising centre in yeast, with the microtubule cytoskeleton playing an essential role in chromosome segregation, cellular organisation and vesicle trafficking in eukaryotic cells. In most cells, the centrosome is the primary microtubule-organising centre that nucleates and organises microtubules. Gamma-tubulin localises to centrosomes and is required for microtubule nucleation. In Saccharomyces cerevisiae, gamma-tubulin forms a stable complex with Spc97 and Spc98 [].; GO: 0000226 microtubule cytoskeleton organization, 0000922 spindle pole, 0005815 microtubule organizing center; PDB: 3RIP_A.
Probab=100.00 E-value=8.5e-68 Score=599.41 Aligned_cols=505 Identities=29% Similarity=0.562 Sum_probs=354.0
Q ss_pred HHHHHhcCCCCCceeeecccccCCCCCCCCCccceEecCC-----CCHHHHHHHHHHHHHHhHHHHHHHHhhhccCC--C
Q 005724 38 DLLSALVGIEGRYISIKRRVNHVHGNDTYDSTVTFQVDAS-----MDLALQEMAKRIFPLCESFVLTGQFVESRSQF--K 110 (681)
Q Consensus 38 dlL~~L~G~~g~~~~~~~~~~~~~~~~~~~~~~~f~i~~~-----~~~sl~~l~~~ll~~g~~~~~l~~fv~~~~~~--~ 110 (681)
|+|++|+|++|.+|++++. ...|.+.+. +++++++++++++++|+.|++|++|++..... .
T Consensus 1 dll~~L~G~~s~~f~~~~~------------~~~~~~~~~~~~~~~~~~~~~~l~~i~~~g~~~~~l~~~i~~~~~~~~~ 68 (542)
T PF04130_consen 1 DLLYALQGVESTFFIWDKD------------SDRFELRPNISSHLSPPSLRSILNEILEIGTLYRRLRSFIERVSSSSSE 68 (542)
T ss_dssp HHHHHHTT---SSSEEETT-------------TEEE--S----TTS-HHHHHHHHHHHHHHHHHHHHHHHHHHTS----S
T ss_pred CHHHHccCCCCceEEEeCC------------CCeEEECCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCC
Confidence 7999999999999999982 245666554 68999999999999999999999999976433 3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CCCcHHHHHHhhhhHHHHHHHHHHHHHHh----hcCCCchhhHHHHH
Q 005724 111 NGLVNHAFAASLRALLLDYEAMVAQLEHQFRL-GRLSIQGLWFYCQPMLGSMQAVSAVIHKA----SANNFTGSAVLNLL 185 (681)
Q Consensus 111 ~g~~~~Al~~~l~~~L~~y~~~i~~lE~~~~~-~~lsL~~L~~~~~~~~~~l~~L~~iv~~~----~~~~~~g~~lL~~L 185 (681)
.|++.+|||++++++|.+|+..|..+|.++.. +.+||..+...++|+...++.|++++.++ ..+..+|+.||+.|
T Consensus 69 ~~~~~~a~~~~l~~~L~~y~~~l~~le~~~~~~~~~sL~~l~~~l~~~~~~l~~L~~l~~~~~~~~~~~~~~g~~lL~~L 148 (542)
T PF04130_consen 69 RGPTLQAFASALSSILQEYREFLSELEESILSNGSLSLLQLLAQLRPWFRRLEALADLIQEIIQLSLSQNLRGGQLLSIL 148 (542)
T ss_dssp -SHHHHHHHHHHHHHTHHHHHHHHHHHHHHHH-TT--HHHHHHHTHHHHHHHHHHHHHHHHH----HHHT--THHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCcHHHHHHHH
Confidence 89999999999999999999999999999866 68999999999999999999999999986 33478999999999
Q ss_pred HHHH-HHccCChHHHHHHHHHHHHHhHHHHHHHHHHHhhceecCCCCcceeeeCccccccccccccchhhhhccccc-cc
Q 005724 186 QSQA-KAMAGDNTVRSLLEKMTQCASNAYLGILERWVYEGVIDDPYGEFFIAEDKSLLKESLTQDYDAKYWRQRYSL-KD 263 (681)
Q Consensus 186 ~~~~-~~~~g~~~~~~~l~~ll~~~~~p~~~~l~~Wl~~G~l~D~~~EFfI~~~~~~~~~~l~~~~~~~~W~~~y~l-~~ 263 (681)
|+.+ ...+|++..++++..|+..+++||++++..||.+|.+.||++||||..+++. .....+++|.++|.+ .+
T Consensus 149 ~~~~~~~~~g~~~~~~~l~~ll~~~~~p~l~~l~~Wl~~G~l~D~~~EFfI~~~~~~-----~~~~~~~~w~~~f~l~~~ 223 (542)
T PF04130_consen 149 YERIYHQQSGDPELRKILQRLLNRCLQPYLRMLDSWLYRGELDDPYDEFFIQRNKES-----NSESSEDFWDDRFVLRES 223 (542)
T ss_dssp HHHH---HS--HHHHHHHHHHHHHHHHHHHHHHHHHHHH-----TTS-SSEEE---------------------EEE-GG
T ss_pred HHHHhhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCCCccceeEeecccc-----cCcccchhhccCEEECcc
Confidence 9987 3358999999999999999999999999999999999999999999998321 123467899999999 68
Q ss_pred CCCcchHH-HHHHHHHhhhHHHHHHHhcCCCCCCCccccc---------------cccc--CCccchHHHHHHHHHHHHH
Q 005724 264 GIPSFLAN-IAGKILTTGKYLNVMRECGHSAQVPTSENSK---------------LLSF--GSNHHYLECVKVAYEFASG 325 (681)
Q Consensus 264 ~vP~Fl~~-~a~~Il~~GK~l~~Lr~~~~~~~~p~~e~~~---------------~~~f--~~~~~~~~~I~~~~~~~s~ 325 (681)
.+|.|++. +|++|+.+||++++|+.|++........... ...+ .....+.+.|++++..+++
T Consensus 224 ~~P~fl~~~~a~~Il~~Gk~~~lL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~ 303 (542)
T PF04130_consen 224 RVPSFLSKDLAEKILEIGKSLRLLRSCNPEHEWCSDQELSSDLCLSDKESSESSSLQPFEPLDQDKLESKIESQYKLVNK 303 (542)
T ss_dssp GS-TTS-HHHHHHHHHHHHHHHT------S------TT-SHHH----HHHHHHHHHHT-SS--HHHHHHHHHHHHHHHHH
T ss_pred cCChhcCHHHHHHHHHHHHHHHHHHHhccccccchhccchhhhhhhhhhhhhHHHhcccccccHHHHHHHHHHHHHHHHH
Confidence 89999955 9999999999999999998764321111000 0011 1125677899999999999
Q ss_pred HHHHHHHhhccHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCcccCHHHHHHHHHHHHHhhhcccCCCCCccceee
Q 005724 326 ELLNLIKERYDLMGKLRSIKRYLLLDQGDFLVHFMDIAREELMKQLDEITVEKLQSLLDIALRSTAAAADPCHEDLTCSV 405 (681)
Q Consensus 326 ~l~~ll~~~~~L~~hL~~l~~~fLL~~Gdf~~~f~~~l~~~L~~~~~~~~~~~L~~~l~~al~~s~~~~d~~~~~l~~~~ 405 (681)
.++++++++++|.+||+++|+||||++|||+..|++.+++.+.++..+.+...++..++.++........+...... .
T Consensus 304 ~l~~~l~~~~~l~~~l~~l~~~~Ll~~gdf~~~f~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~- 381 (542)
T PF04130_consen 304 SLLDLLFEDYNLLEHLKALRDFFLLGDGDFADSFLESLFEKLESPSSRSSDSNLNSILQEALRASSADWSDESSNLR-S- 381 (542)
T ss_dssp HHHHHHHHHS-HHHHHHHHHHHTT---HHHHHHHHHHHHHHHSS---TTHHHHHHHHHHHHHHHTT---TTSGGGEE-E-
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHhcCCccccchhhHHHHHHHHHHhCccccccchhhhh-h-
Confidence 99999999999999999999999999999999999999999999888888888888888888765433221100000 0
Q ss_pred ccccHHHHHHhhhccccccCCCCCCCCCCCCCcccceEEeeeecCCCcceeechHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 005724 406 ERSSLLKRMATLKGVEIKTSSDSVDLEQPVSITGLETFSLSYKVQWPLSIVISRKALTKYQMVFRLLFHCKHVERQLCGA 485 (681)
Q Consensus 406 ~~~~l~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~d~l~L~Y~v~wPL~liit~~~l~~Y~~iFr~Ll~lk~~~~~L~~~ 485 (681)
........... ...... ........+.+..+|+.+.|+|++||||++|||+++|.+|++||+|||++|++++.|+++
T Consensus 382 ~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~l~L~y~~~~PL~lilt~~~~~~Y~~IF~~Ll~lk~~~~~L~~~ 458 (542)
T PF04130_consen 382 GEISSSTSLSS--NLSSND-SSSRNSNNSSSLEGWDALTLSYKVPWPLNLILTPSVMEKYNRIFRFLLQLKRAEWALQSV 458 (542)
T ss_dssp ---------------------------------TTTTEEEEE---TTGGGTS-HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccchh--hhhhhh-hhcccccccccccccceeEEEecCCccHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000000000 000000 001122345678999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhcc-ccC----CchhhHHhHHHHHHHHHHHHHHHHHHHhhhcccccHHHHHHHhccCCCHHHHHHHHHHHHHHHH
Q 005724 486 WQVHQGAR-AFN----ASGTAISRSSLLCRSMLKFINSLLHYLTFEVLEPNWHVMHNRLQTAKSIDEVIQHHDFFLDKCL 560 (681)
Q Consensus 486 w~~~~~~r-~~~----~~~~~~~~~~~lr~~m~~Fv~~l~~Y~~~~VIe~~~~~~~~~l~~a~~ld~l~~~H~~fL~~i~ 560 (681)
|...+..+ ... ......++++.+|++|.|||+++++|++++||++.|.+|.++++++.|+|+|+++|++||++|+
T Consensus 459 w~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~m~~fv~~l~~y~~~~vI~~~~~~f~~~l~~~~~~d~l~~~H~~yL~~i~ 538 (542)
T PF04130_consen 459 WRQLRRLSRKFGKPDRQSRPQLRRLQILRHRMQHFVNSLQSYLQFDVIEPSWSEFMEKLEKAKSLDELIEAHDDYLDRIL 538 (542)
T ss_dssp HHHHTSGGG--------S-SHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHT---HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHH
Confidence 99876421 111 1224577889999999999999999999999999999999999999999999999999999999
Q ss_pred HHhc
Q 005724 561 RECL 564 (681)
Q Consensus 561 ~~cf 564 (681)
++||
T Consensus 539 ~~~f 542 (542)
T PF04130_consen 539 RRCF 542 (542)
T ss_dssp HHHH
T ss_pred HhhC
Confidence 9997
No 4
>KOG2000 consensus Gamma-tubulin complex, DGRIP91/SPC98 component [Cytoskeleton]
Probab=100.00 E-value=6.7e-53 Score=468.53 Aligned_cols=519 Identities=26% Similarity=0.421 Sum_probs=436.8
Q ss_pred cchHHHHHHHHHHHhcCCCCCceeeecccccCCCCCCCCCccceEecC--CCCHHHHHHHHHHHHHHhHHHHHHHHhhhc
Q 005724 29 GVQELLVIDDLLSALVGIEGRYISIKRRVNHVHGNDTYDSTVTFQVDA--SMDLALQEMAKRIFPLCESFVLTGQFVESR 106 (681)
Q Consensus 29 ~~~E~~lv~dlL~~L~G~~g~~~~~~~~~~~~~~~~~~~~~~~f~i~~--~~~~sl~~l~~~ll~~g~~~~~l~~fv~~~ 106 (681)
.+.|..+|++++|+++|+.|.++.++... ..|.+.. +++.+...++..+.++|.+|.++..|+...
T Consensus 201 ~i~e~~lvk~v~yvl~gv~~~~~~~~~~~------------~~~~~k~~~~~~~~~~~l~~~lSelg~l~~~~~~~~~~~ 268 (879)
T KOG2000|consen 201 LIKEEDLVKDVLYVLQGVDGALFSFDSEL------------ECFVVKGPVHLPRGISGLLYLLSELGVLYQRVSTFSDQL 268 (879)
T ss_pred cchHHHHHHHHHHHHhhhhhceeecccHH------------hhhhhhccccchhhHHHHHHHHHHHhHHHHhhhhhcchh
Confidence 48999999999999999999999988732 2232222 255677888899999999999999999875
Q ss_pred cCC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-----------CCcHHHHHHhhhhHHHHHHHHHHHHHHhh
Q 005724 107 SQF---KNGLVNHAFAASLRALLLDYEAMVAQLEHQFRLG-----------RLSIQGLWFYCQPMLGSMQAVSAVIHKAS 172 (681)
Q Consensus 107 ~~~---~~g~~~~Al~~~l~~~L~~y~~~i~~lE~~~~~~-----------~lsL~~L~~~~~~~~~~l~~L~~iv~~~~ 172 (681)
... ..|.+.|||+.++++.+++|+..+..+..++... .+++..++.++.....+|+.++.++..+.
T Consensus 269 ~l~~~~~~g~v~qaf~~~l~~elq~y~~~v~~~~s~~~~~~~~~~~~~~~~~~~l~r~la~~~~~~~rl~i~~~l~e~~~ 348 (879)
T KOG2000|consen 269 VLDNPYCIGLVGQAFTAELSDELQYYYALVRSLLTSLSRNKIGIVNLKLVSEVTLLRLLAWIYEPGIRLQILCKLVEHCQ 348 (879)
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhccccceecccccchhhhhhhhhHHHHHHHHhhcchhhhHHHHHHHHhc
Confidence 332 3799999999999999999999999988776331 13677777888888889999999999987
Q ss_pred cCCCchhhHHHHHHHHHHHccCChHHHHHHHHHHHHHhHHHHHHHHHHHhhceecCCCCcceeeeCccccccccccccch
Q 005724 173 ANNFTGSAVLNLLQSQAKAMAGDNTVRSLLEKMTQCASNAYLGILERWVYEGVIDDPYGEFFIAEDKSLLKESLTQDYDA 252 (681)
Q Consensus 173 ~~~~~g~~lL~~L~~~~~~~~g~~~~~~~l~~ll~~~~~p~~~~l~~Wl~~G~l~D~~~EFfI~~~~~~~~~~l~~~~~~ 252 (681)
..+|+.++..++... .+|++.++.+...++...+.||.+++..|+..|.+.|+|+||||..++.... -..+
T Consensus 349 --~~~g~~l~~~~~~f~--~~g~~~i~~i~~~lL~~~~~p~~~~i~~wi~~G~l~D~y~EFfV~~~~~~~~-----~~~d 419 (879)
T KOG2000|consen 349 --VPKGGKLLSAVHEFL--THGDLYVHPIVFSLLHSSCSPYYRMLRNWLLEGELRDTYGEFFVAENPDPGS-----VKDD 419 (879)
T ss_pred --ccCCCcchHHHHHHH--HhCCCcccHHHHHHhhhcchHHHHHHHHHHHcCcccccccceEEeccCCCCc-----cccc
Confidence 778888999998875 5999999999999999999999999999999999999999999999886421 1257
Q ss_pred hhhhccccc-ccCCCcchHH-HHHHHHHhhhHHHHHHHhcCCCCCCCcccc---------cccccCCccchHHHHHHHHH
Q 005724 253 KYWRQRYSL-KDGIPSFLAN-IAGKILTTGKYLNVMRECGHSAQVPTSENS---------KLLSFGSNHHYLECVKVAYE 321 (681)
Q Consensus 253 ~~W~~~y~l-~~~vP~Fl~~-~a~~Il~~GK~l~~Lr~~~~~~~~p~~e~~---------~~~~f~~~~~~~~~I~~~~~ 321 (681)
.+|++.|.+ .+++|.|++. +|.||+.|||++++|+.|+++..|...-+. .-..++.+..+...|+++|.
T Consensus 420 ~lw~~~~~l~~~~lP~Fi~~~~a~kI~l~GKsinfL~~~c~e~~w~~e~~~~~~~~~s~~~~l~~~~~~~l~~~v~~ay~ 499 (879)
T KOG2000|consen 420 RLWHDGYKLRYEMLPSFIPMELAQKILLIGKSINFLRDCCNEQTWSDEIDAKASVEESSTRDLEYASDVGLLGSVSEAYS 499 (879)
T ss_pred cccccccccchhhcccccCHHHHHHHHHhhhHHHHHHHhccccccccchhHHHHHhhhhhhhhccCCChhHHHHHhhhhc
Confidence 899999999 5899999999 999999999999999999887654221110 12234455678889999999
Q ss_pred HHHHHHHHHHHhhccHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCcccCHHHHHHHHHHHHHhh-hcccCCCCCc
Q 005724 322 FASGELLNLIKERYDLMGKLRSIKRYLLLDQGDFLVHFMDIAREELMKQLDEITVEKLQSLLDIALRST-AAAADPCHED 400 (681)
Q Consensus 322 ~~s~~l~~ll~~~~~L~~hL~~l~~~fLL~~Gdf~~~f~~~l~~~L~~~~~~~~~~~L~~~l~~al~~s-~~~~d~~~~~ 400 (681)
...+++.+++.+.+++.+|+.++|+|.|+|+|||+..+++.+.+.+..|...+..+.|+..++.|+|.+ +++.||-
T Consensus 500 e~inhl~~ll~~~~~l~dh~~a~k~ylllGqgDfid~lme~~~n~l~~p~~tl~~~~lt~~ldsaiR~s~na~yd~~--- 576 (879)
T KOG2000|consen 500 EIVNHLNDILEEVISLLDHNQALKRYLLLGQSDFIDVLMEEKKNILARPRDTLPEHKLTGVLDSAVRSSLNAQYDDR--- 576 (879)
T ss_pred cchHHHHHHHHHHhhHHHHHHHHHHHHHhccchHHHHHHHhhcchhcCcchhhhHhHHHHHHHHHHhhhhccccCCh---
Confidence 999999999999999999999999999999999999999999999999999999999999999999998 7766542
Q ss_pred cceeeccccHHHHHHhhhccccccCCCCCCCCCCCCCcccceEEeeeecCCCcceeechHHHHHHHHHHHHHHHHHHHHH
Q 005724 401 LTCSVERSSLLKRMATLKGVEIKTSSDSVDLEQPVSITGLETFSLSYKVQWPLSIVISRKALTKYQMVFRLLFHCKHVER 480 (681)
Q Consensus 401 l~~~~~~~~l~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~d~l~L~Y~v~wPL~liit~~~l~~Y~~iFr~Ll~lk~~~~ 480 (681)
+...++ +.+.. .-..+..|||.+.++|.+.-|+++++|++++.+|-+||+|||++||+++
T Consensus 577 --------~vL~Rl------d~~~~------~~~~gd~gwdvfsl~y~v~~p~s~v~t~~~~~~ylrif~flwrlkR~e~ 636 (879)
T KOG2000|consen 577 --------DVLNRL------DVRVL------KLSHGDDGWDVFSLDYAVDGPLSLVLTRELMLKYLRVFNFLWKLKRVEF 636 (879)
T ss_pred --------hhhhhh------hhHhh------hccCCcccceeeeecceecccHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 122222 22211 1234678999999999999999999999999999999999999999999
Q ss_pred HH-HHHHHHhhh-cc--cc----C--CchhhHHhHHHHHHHHHHHHHHHHHHHhhhcccccHHHHHHHhccCCC-HHHHH
Q 005724 481 QL-CGAWQVHQG-AR--AF----N--ASGTAISRSSLLCRSMLKFINSLLHYLTFEVLEPNWHVMHNRLQTAKS-IDEVI 549 (681)
Q Consensus 481 ~L-~~~w~~~~~-~r--~~----~--~~~~~~~~~~~lr~~m~~Fv~~l~~Y~~~~VIe~~~~~~~~~l~~a~~-ld~l~ 549 (681)
.| .+.|+..+. .+ .. . ......++++.+..+|.||+.++|+|+..+|||.+|+.|..+++++.+ +|..+
T Consensus 637 ~L~~~i~k~~m~~~~~~~~~~~~~i~~~~~~~~r~h~~~~E~~~f~sq~q~y~~f~vie~~wk~l~~~~~~a~~~ld~~~ 716 (879)
T KOG2000|consen 637 LLELHIWKMLMKDCNVAKRDRLLKIPEISCALHRCHILTNEMNHFISQMQYYILFEVIECSWKELSKKMEPARNPLDFQL 716 (879)
T ss_pred HHHHHHHHhhhhhhcccccchhcchHHHHhhhhhhhhHHHHHHHHHHhhhhccccchhhcChHHHHHHHhhccCchHHHH
Confidence 99 789998873 11 11 0 112345677888899999999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHHHHHhcCCC-h---HHHHHHHHHHHHHHHHHHHHHHH
Q 005724 550 QHHDFFLDKCLRECLLHL-P---DLLKKVERLKSLCLQYAAATQWL 591 (681)
Q Consensus 550 ~~H~~fL~~i~~~cfL~~-~---~l~~~l~~il~~~~~F~~~~~~~ 591 (681)
++|+-|++.|.-.|++.+ + .+.+.+..+++.++.+......+
T Consensus 717 eah~~~~~ti~i~~~l~~~~~~~s~~~~l~~l~e~Il~~~~~~~~~ 762 (879)
T KOG2000|consen 717 EAHRPFLDTISIRGILQEKASVESIEHSLSALLELILNLAELQSSF 762 (879)
T ss_pred hhccccccceeecccccCcccchhhHHhHHHHHHHHhhhhcccccc
Confidence 999999999999999996 3 37788888999999888765443
No 5
>KOG4344 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.96 E-value=9.1e-27 Score=241.99 Aligned_cols=609 Identities=18% Similarity=0.184 Sum_probs=386.1
Q ss_pred chHHHHHHHHHHHhcCCCCCceeeecccccCCCCCCCCCccceEecCCCCHHHHHHHHHHHHHHhHHHHHHHHhhhccCC
Q 005724 30 VQELLVIDDLLSALVGIEGRYISIKRRVNHVHGNDTYDSTVTFQVDASMDLALQEMAKRIFPLCESFVLTGQFVESRSQF 109 (681)
Q Consensus 30 ~~E~~lv~dlL~~L~G~~g~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~sl~~l~~~ll~~g~~~~~l~~fv~~~~~~ 109 (681)
++|-..+.+-++.+-|...-|+ +.. +.|+.. ...-..++...++-.+..++.+.-+|.....|..|+......
T Consensus 290 vtepprifeqlWllggtdkLFi-fih----idgkcq--drhlialphlahpcdnfaleqiaalghnafgLlafidekmgh 362 (1121)
T KOG4344|consen 290 VTEPPRIFEQLWLLGGTDKLFI-FIH----IDGKCQ--DRHLIALPHLAHPCDNFALEQIAALGHNAFGLLAFIDEKMGH 362 (1121)
T ss_pred cCCCCcHHHHHHHhcCCceEEE-EEe----ecceee--eeeeeeccccccchHHHHHHHHHHhhhhHHHHHhccchhccC
Confidence 5566667778888888766554 333 223321 111222233345667888999999999999999998664211
Q ss_pred C------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc--CCCcHHHHHHhhhhHHHH--HHHHHHH
Q 005724 110 K------------------NGLVNHAFAASLRALLLDYEAMVAQLEHQFRL--GRLSIQGLWFYCQPMLGS--MQAVSAV 167 (681)
Q Consensus 110 ~------------------~g~~~~Al~~~l~~~L~~y~~~i~~lE~~~~~--~~lsL~~L~~~~~~~~~~--l~~L~~i 167 (681)
+ +=.+-+||.-++-+.--.|.+.++.+++-+.. ++++|..+.-.+.+.+.. +..+..+
T Consensus 363 epcllleglfmfpkkascafFefdkAfmralvkdfisfkeelaeIckcianndqnflLadVVdaLadmlelrhiidlHkl 442 (1121)
T KOG4344|consen 363 EPCLLLEGLFMFPKKASCAFFEFDKAFMRALVKDFISFKEELAEICKCIANNDQNFLLADVVDALADMLELRHIIDLHKL 442 (1121)
T ss_pred CchHhhhhcccccCccccchhhHHHHHHHHHHHHHhhhHHHHHhHHhhhhcCCceeeHHHHHHHHHHHHhhHHHHHHHHH
Confidence 0 11345566666655555677788888865533 356666666555555433 2223333
Q ss_pred HHH-h-h-c----CCCchhhHHHHHHHHHHHc--cCC--hHH-HHHHHHHHHHHhHHHHHHHHHHHhhceecCCCCccee
Q 005724 168 IHK-A-S-A----NNFTGSAVLNLLQSQAKAM--AGD--NTV-RSLLEKMTQCASNAYLGILERWVYEGVIDDPYGEFFI 235 (681)
Q Consensus 168 v~~-~-~-~----~~~~g~~lL~~L~~~~~~~--~g~--~~~-~~~l~~ll~~~~~p~~~~l~~Wl~~G~l~D~~~EFfI 235 (681)
.-. + + + .......+++-+++.+..+ .|+ +.. ..++-.|......|+++.+.+|+..|.++|...||.|
T Consensus 443 ffhGVaetppdeffavgardLlnpickaiiaYddrgeadeakntlilFsiefeehfpqLqlldElaedghLddGaaefii 522 (1121)
T KOG4344|consen 443 FFHGVAETPPDEFFAVGARDLLNPICKAIIAYDDRGEADEAKNTLILFSIEFEEHFPQLQLLDELAEDGHLDDGAAEFII 522 (1121)
T ss_pred hhcccccCCCchhhhhhHHHHHHHHHHHHHHhccccccCcccceEEEEEEehhhhhHHHHHHHHHHHhccccccHHHHHH
Confidence 211 0 0 0 1223357899999876532 343 222 2233446677889999999999999999999999999
Q ss_pred eeCccccccccccccchhhhh---------------ccccc-------ccC--------CCcchHHHHHHHHHhhhHHHH
Q 005724 236 AEDKSLLKESLTQDYDAKYWR---------------QRYSL-------KDG--------IPSFLANIAGKILTTGKYLNV 285 (681)
Q Consensus 236 ~~~~~~~~~~l~~~~~~~~W~---------------~~y~l-------~~~--------vP~Fl~~~a~~Il~~GK~l~~ 285 (681)
....+.-- ....+|- ++|.+ ++. +-.|..+.-..|..+||..+.
T Consensus 523 arlknrlv------kHrdfqyaphqklataekfeneekmcdiadassgraagedhlqefiVeFckeedaniimagkrkql 596 (1121)
T KOG4344|consen 523 ARLKNRLV------KHRDFQYAPHQKLATAEKFENEEKMCDIADASSGRAAGEDHLQEFIVEFCKEEDANIIMAGKRKQL 596 (1121)
T ss_pred HHHhcccc------ccchhhhccHHHHHHHHHhhhHHHHhhhhccccccccChHHHHHHHHHHHHHHHHHHHHhhhHHHh
Confidence 88764210 0112220 11211 112 334555544568889999999
Q ss_pred HHH--hcCCC----------C-CC----------------------C---------ccc----------------cc---
Q 005724 286 MRE--CGHSA----------Q-VP----------------------T---------SEN----------------SK--- 302 (681)
Q Consensus 286 Lr~--~~~~~----------~-~p----------------------~---------~e~----------------~~--- 302 (681)
+.. |..+. + .| . .|. .+
T Consensus 597 lgnlqcaEddKOGaeafdaeqscpLYqLfLEhalergehgddlcspntLsEmlqankEiqLmklhdeaeshffalddVhc 676 (1121)
T KOG4344|consen 597 LGNLQCAEDDLCLAEAFDAEQSCPLYQLFLEHALERGEHGDDLCSPNTLSEMLQANKEIQLMKLHDEAESHFFALDDVHC 676 (1121)
T ss_pred hccccccchhhHHHHhhhhhhcCcHHHHHHHHHHHhccccccccCHHHHHHHHhhccccchhhHHHHHHHhHHHHhhccC
Confidence 884 32221 0 00 0 000 00
Q ss_pred ---ccccCC--------------------------c---------cchHHHHHHH--HHHHHHHHHHHHHhhccHHHHHH
Q 005724 303 ---LLSFGS--------------------------N---------HHYLECVKVA--YEFASGELLNLIKERYDLMGKLR 342 (681)
Q Consensus 303 ---~~~f~~--------------------------~---------~~~~~~I~~~--~~~~s~~l~~ll~~~~~L~~hL~ 342 (681)
-..|.+ + .-+.+.|+++ +...+..||.-+.+++.+.+.|+
T Consensus 677 gadaidfadepeedkDfedkfacgdvcvdrsqeirncelFaiflqpclephidkQrerLdccgnLManikKdlelsecLQ 756 (1121)
T KOG4344|consen 677 GADAIDFADEPEEDKDFEDKFACGDVCVDRSQEIRNCELFAIFLQPCLEPHIDKQRERLDCCGNLMANIKKDLELSECLQ 756 (1121)
T ss_pred cccccchhhCCCccccHHHhhccccccccccccceehhhHHHHhhhhhhHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 000100 0 1123568888 55678899999999999999999
Q ss_pred HHHHHHhcCCcchHHHHHHHHHHHHhccCcccCHHHHHHHHHHHHHhhhcccC--CCCCccceeeccccHH-HHHHhh--
Q 005724 343 SIKRYLLLDQGDFLVHFMDIAREELMKQLDEITVEKLQSLLDIALRSTAAAAD--PCHEDLTCSVERSSLL-KRMATL-- 417 (681)
Q Consensus 343 ~l~~~fLL~~Gdf~~~f~~~l~~~L~~~~~~~~~~~L~~~l~~al~~s~~~~d--~~~~~l~~~~~~~~l~-~~l~~~-- 417 (681)
+.+.||++.+||.+..|.-..+........+.+....+..|+.|..-.. .+- |+...+.+.++.-+-. ..|+++
T Consensus 757 akreffeaegedlmrdfwlaiedaIRakckeqnVaekmrfLqeamglek-rYlfvedsnaLfirfEnvdnakkaLgsvlt 835 (1121)
T KOG4344|consen 757 AKREFFEAEGEDLMRDFWLAIEDAIRAKCKEQNVAEKMRFLQEAMGLEK-RYLFVEDSNALFIRFENVDNAKKALGSVLT 835 (1121)
T ss_pred HHHHHHHHhchHHHHHHHHHHHHHHHHHhhHHhHHHHHHHHHHHhhhhh-cccccccccceeEEeecccchhhhcchhhh
Confidence 9999999999999999999998877665666666666667777654210 111 2334444444421100 001100
Q ss_pred ---hc------------cccccCCCCCCCCCCCCCcccceEEeeee--cCCCcceeechHHHHHHHHHHHHHHHHHHHHH
Q 005724 418 ---KG------------VEIKTSSDSVDLEQPVSITGLETFSLSYK--VQWPLSIVISRKALTKYQMVFRLLFHCKHVER 480 (681)
Q Consensus 418 ---~~------------l~~~~~~~~~~~~~~~~~~~~d~l~L~Y~--v~wPL~liit~~~l~~Y~~iFr~Ll~lk~~~~ 480 (681)
.. +.+...+.- ....-....++|++.|+|+ +|||..+|||+.+|..||.+|+.|+++|++.|
T Consensus 836 sklcavllphypqlahylhvklisqi-nsnsikvveaLdaieLdferpmamhqdiiislacmkdYNqVflLlLkiKWAkw 914 (1121)
T KOG4344|consen 836 SKLCAVLLPHYPQLAHYLHVKLISQI-NSNSIKVVEALDAIELDFERPMAMHQDIIISLACMKDYNQVFLLLLKIKWAKW 914 (1121)
T ss_pred hhhhhhhcccchhhhhHHHHHHHhhh-cccchhhhhhhhheeecccCCcccchheEecHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 000000000 0011123578999999999 89999999999999999999999999999999
Q ss_pred HHHHHHHH-h--hh----cc---------------ccCCchhhHHhHHHHHHHHHHHHHHHHHHHhhhcccccHHHHHHH
Q 005724 481 QLCGAWQV-H--QG----AR---------------AFNASGTAISRSSLLCRSMLKFINSLLHYLTFEVLEPNWHVMHNR 538 (681)
Q Consensus 481 ~L~~~w~~-~--~~----~r---------------~~~~~~~~~~~~~~lr~~m~~Fv~~l~~Y~~~~VIe~~~~~~~~~ 538 (681)
.|..+-.. . +. .| +....+..++|...+|.+++|||++|+.|++..|+++...+|+.+
T Consensus 915 kLdnllfgelvsmaekpRakegliheqdtvaqfcapkdliglqIhRleilRfkLiffiNnLHahIMeailhStgleFehq 994 (1121)
T KOG4344|consen 915 KLDNLLFGELVSMAEKPRAKEGLIHEQDTVAQFCAPKDLIGLQIHRLEILRFKLIFFINNLHAHIMEAILHSTGLEFEHQ 994 (1121)
T ss_pred hhhhhhhhhhhhhhhhhhhhccccccccccccCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHH
Confidence 99985431 1 10 01 111235678899999999999999999999999999999999999
Q ss_pred hccCCCHHHHHHHHHHHHHHHHHHhcCCC--hHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCChhHHHH
Q 005724 539 LQTAKSIDEVIQHHDFFLDKCLRECLLHL--PDLLKKVERLKSLCLQYAAATQWLISSSIDLPKLEEPSDGFSGSEKFKR 616 (681)
Q Consensus 539 l~~a~~ld~l~~~H~~fL~~i~~~cfL~~--~~l~~~l~~il~~~~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 616 (681)
+..|+|+|+++..|.+||..|...|+|++ +.+..+|.+|+.+++.|+.-|+..++- + +....
T Consensus 995 ieEaKdldeLiiiHdehLatihdhClLrdefkafkeAidkifhLalmfadeWqtcasc-m--hagda------------- 1058 (1121)
T KOG4344|consen 995 IEEAKDLDELIIIHDEHLATIHDHCLLRDEFKAFKEAIDKIFHLALMFADEWQTCASC-M--HAGDA------------- 1058 (1121)
T ss_pred HhhhcCHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchhhhh-h--ccccc-------------
Confidence 99999999999999999999999999997 578899999999999999999876531 1 21110
Q ss_pred HHhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHHHhccc--ccccchHHHHHHHHhcc
Q 005724 617 LKLRSLSQVQKVMIRDATVTESILKFEREFNNELQSLGPILSSS--SQAEPYLTHLAQLVLGV 677 (681)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~F~~~~~~l~~~l~~~--~~~~~~~~~L~~ll~rl 677 (681)
-+....+.+. . .+.-+.-.+.|.++..+++..++.. ....++...|+-+|..=
T Consensus 1059 ---KOGdesIedd----e-iDdsetqrrsfencalflVaeiekavcRchfmhadiLalllhag 1113 (1121)
T KOG4344|consen 1059 ---LCLDESIEDD----E-IDDSETQRRSFENCALFLVAEIEKAVCRCHFMHADILALLLHAG 1113 (1121)
T ss_pred ---hhhhhhhhcc----c-ccchHHHHhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHhcC
Confidence 0000000000 0 0011122355888888888887763 24566777777766543
No 6
>PF14609 GCP5-Mod21: gamma-Tubulin ring complex non-core subunit mod21
Probab=52.20 E-value=1.5e+02 Score=32.35 Aligned_cols=64 Identities=9% Similarity=0.115 Sum_probs=45.3
Q ss_pred ccchHHHHHHHHHHHhcCCCCCceeeecccccCCCCCCCCCccceEecCCC---CH-HHHHHHHHHHHHHhHHHHHHHHh
Q 005724 28 AGVQELLVIDDLLSALVGIEGRYISIKRRVNHVHGNDTYDSTVTFQVDASM---DL-ALQEMAKRIFPLCESFVLTGQFV 103 (681)
Q Consensus 28 ~~~~E~~lv~dlL~~L~G~~g~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~---~~-sl~~l~~~ll~~g~~~~~l~~fv 103 (681)
..+.|+-+++|.+++|+|++|-+|...+ ..++..|.. .. -++.++..+...|.-+..+++-.
T Consensus 178 ~riseqs~~~e~IymL~Gy~~~~f~~ve--------------~~l~~~P~~~~ls~~i~~~il~~~~~~G~~l~~~nqva 243 (653)
T PF14609_consen 178 YRISEQSWKYEIIYMLMGYQGHIFTCVE--------------EILRHAPQNQHLSYWIQQHILSNFCNWGRELHIMNQVA 243 (653)
T ss_pred eeecccchHHHHHHHHhcCcchhhhhhH--------------hhhcccccccchHHHHHHHHHHHhhccccchHHHHHHh
Confidence 3688999999999999999999996544 223333332 22 34667788888888888787644
Q ss_pred hh
Q 005724 104 ES 105 (681)
Q Consensus 104 ~~ 105 (681)
.+
T Consensus 244 ~~ 245 (653)
T PF14609_consen 244 NE 245 (653)
T ss_pred CC
Confidence 43
No 7
>PF13060 DUF3921: Protein of unknown function (DUF3921)
Probab=22.15 E-value=1.5e+02 Score=21.20 Aligned_cols=46 Identities=11% Similarity=0.203 Sum_probs=32.5
Q ss_pred HHHHhhhcccccHHHHHHHhccC-CCHHHHHHHHHHHHHHHHHHhcC
Q 005724 520 LHYLTFEVLEPNWHVMHNRLQTA-KSIDEVIQHHDFFLDKCLRECLL 565 (681)
Q Consensus 520 ~~Y~~~~VIe~~~~~~~~~l~~a-~~ld~l~~~H~~fL~~i~~~cfL 565 (681)
|--+....|+..+.++-+.++.- .-.|++.++.++||..+....++
T Consensus 5 qlsmiqkaih~tydelgkei~~~g~~~d~i~kaqeeylsals~et~i 51 (58)
T PF13060_consen 5 QLSMIQKAIHRTYDELGKEIDLQGVIADEIQKAQEEYLSALSHETLI 51 (58)
T ss_pred HHHHHHHHHHHhHHHHhHHhhhcchHHHHHHHHHHHHHHHhhHHHHH
Confidence 33344566777788887777642 35799999999999887655443
No 8
>PF09164 VitD-bind_III: Vitamin D binding protein, domain III; InterPro: IPR015247 This domain is predominantly found in Vitamin D binding proteins, and adopts a multihelical structure. It is required for formation of an actin 'clamp', allowing the protein to bind to actin []. ; PDB: 1MA9_A 1KW2_A 1KXP_D 1J7E_A 1J78_A 1LOT_A.
Probab=21.66 E-value=1.2e+02 Score=23.34 Aligned_cols=40 Identities=25% Similarity=0.574 Sum_probs=26.6
Q ss_pred cccHHHHHHHhc--------c--CCCHHHHHHHHHHHHHHHHHHhcCCChHHH
Q 005724 529 EPNWHVMHNRLQ--------T--AKSIDEVIQHHDFFLDKCLRECLLHLPDLL 571 (681)
Q Consensus 529 e~~~~~~~~~l~--------~--a~~ld~l~~~H~~fL~~i~~~cfL~~~~l~ 571 (681)
+-.|.+|.++|. + ...+.++++.|.+|-..| |++++|+++
T Consensus 8 e~tFtEyKKrL~e~l~~k~P~at~~~l~~lve~RsdFAS~C---C~~NsPPlY 57 (68)
T PF09164_consen 8 ENTFTEYKKRLAERLRAKLPDATPTELKELVEKRSDFASKC---CSINSPPLY 57 (68)
T ss_dssp TS-HHHHHHHHHHHHHHH-TTS-HHHHHHHHHHHHHHHHHH---SSTT--HHH
T ss_pred hccHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHhhHHHHh---hccCCCchh
Confidence 344555555554 2 347899999999998875 888888863
No 9
>KOG2000 consensus Gamma-tubulin complex, DGRIP91/SPC98 component [Cytoskeleton]
Probab=21.62 E-value=1.4e+02 Score=35.67 Aligned_cols=121 Identities=10% Similarity=-0.068 Sum_probs=87.1
Q ss_pred CcccceEEeeeecCCCcceeechHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-h-ccccCCchhhHHhHHHHHHHHHH
Q 005724 437 ITGLETFSLSYKVQWPLSIVISRKALTKYQMVFRLLFHCKHVERQLCGAWQVHQ-G-ARAFNASGTAISRSSLLCRSMLK 514 (681)
Q Consensus 437 ~~~~d~l~L~Y~v~wPL~liit~~~l~~Y~~iFr~Ll~lk~~~~~L~~~w~~~~-~-~r~~~~~~~~~~~~~~lr~~m~~ 514 (681)
..++|.-...|++..++.-.++.-.- ..+|..+|++.+-.|.+.+.|.... . ++...... ...-..|..|.|
T Consensus 589 ~~~gd~gwdvfsl~y~v~~p~s~v~t---~~~~~~ylrif~flwrlkR~e~~L~~~i~k~~m~~~---~~~~~~~~~~i~ 662 (879)
T KOG2000|consen 589 LSHGDDGWDVFSLDYAVDGPLSLVLT---RELMLKYLRVFNFLWKLKRVEFLLELHIWKMLMKDC---NVAKRDRLLKIP 662 (879)
T ss_pred ccCCcccceeeeecceecccHHHHhh---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh---cccccchhcchH
Confidence 46677788899999999998874333 9999999999999999999999773 2 22111000 002356678899
Q ss_pred HHHHHHHHHhhhcccccHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhcCC
Q 005724 515 FINSLLHYLTFEVLEPNWHVMHNRLQTAKSIDEVIQHHDFFLDKCLRECLLH 566 (681)
Q Consensus 515 Fv~~l~~Y~~~~VIe~~~~~~~~~l~~a~~ld~l~~~H~~fL~~i~~~cfL~ 566 (681)
++.+...++...+.|-+| |..+++--..++ ++++|-.++...+..-...
T Consensus 663 ~~~~~~~r~h~~~~E~~~--f~sq~q~y~~f~-vie~~wk~l~~~~~~a~~~ 711 (879)
T KOG2000|consen 663 EISCALHRCHILTNEMNH--FISQMQYYILFE-VIECSWKELSKKMEPARNP 711 (879)
T ss_pred HHHhhhhhhhhHHHHHHH--HHHhhhhccccc-hhhcChHHHHHHHhhccCc
Confidence 999999999887666444 444444444454 8999999999888766663
No 10
>PLN00032 DNA-directed RNA polymerase; Provisional
Probab=20.49 E-value=1.1e+02 Score=24.05 Aligned_cols=46 Identities=22% Similarity=0.355 Sum_probs=33.5
Q ss_pred hhhcccccHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhcCCChHH
Q 005724 524 TFEVLEPNWHVMHNRLQTAKSIDEVIQHHDFFLDKCLRECLLHLPDL 570 (681)
Q Consensus 524 ~~~VIe~~~~~~~~~l~~a~~ld~l~~~H~~fL~~i~~~cfL~~~~l 570 (681)
...||...|.+|.+.+++-.|..++.+.-. .=..|.+..||+..++
T Consensus 10 CGkvig~~we~y~~~~~~g~~~~~~LD~LG-~~RYCCRRMllsHvdl 55 (71)
T PLN00032 10 CGKVIGNKWDTYLDLLQADYSEGDALDALG-LVRYCCRRMLMTHVDL 55 (71)
T ss_pred CCCCcHHHHHHHHHHHhcCCCHHHHHHHhC-chhhhhhhHHHHHHHH
Confidence 456899999999999988778877665533 2245677788876544
Done!