BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005729
(680 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8L844|PP413_ARATH Pentatricopeptide repeat-containing protein At5g42310,
mitochondrial OS=Arabidopsis thaliana GN=At5g42310 PE=2
SV=1
Length = 709
Score = 965 bits (2495), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 494/709 (69%), Positives = 573/709 (80%), Gaps = 32/709 (4%)
Query: 1 MILLPPQPL-SVRFPAIHSACPITRHHV-IFQPAFSVSTITGITTATASGESSFSSSSFT 58
M+LL PL S RF +++ HH FQP +S + T+A+ S SSSS+
Sbjct: 1 MLLLQQPPLVSTRFHSLYFLTHHHHHHHRFFQPP--ISAFSATTSASLPSPSPSSSSSYF 58
Query: 59 SKQNDTEEEEEDDDDVLSLQKQRYDFTPLLNFLSENSNSESA----SALASSPSSLNRVE 114
S N + EE+D++ S +RYDF+PLL FLS E A S +SP SLN VE
Sbjct: 59 SSWNGLDTNEEEDNEFSSEVHRRYDFSPLLKFLSRFGPVELALDSESESEASPESLNPVE 118
Query: 115 FKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALG 174
F L ESYRAVPAP WHSL+K+L SS SS+ LAYAVVSWLQKHNLC+SYELLYSILIHALG
Sbjct: 119 FDLVESYRAVPAPYWHSLIKSLTSSTSSLGLAYAVVSWLQKHNLCFSYELLYSILIHALG 178
Query: 175 RSEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLV 234
RSEKLYEAFLLSQ+Q LTPLTYNALI ACARN+D+EKALNL++KMRQDGY DF+NYSLV
Sbjct: 179 RSEKLYEAFLLSQKQTLTPLTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLV 238
Query: 235 IQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGV 294
IQSLTR+NKIDS +L +LYKEIE DK+ELD QL+ND+I+GFAK+GD SKA++ LGMAQ
Sbjct: 239 IQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQAT 298
Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
GLS KTAT ++I+AL++SGRT+EAEA+FEEL++SG+KPRT+AYNALLKGYVK G LKDA
Sbjct: 299 GLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDA 358
Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
E +VSEME+ GV PDEHTYSLLIDAY NAGRWESARIVLKEME +PNSF++SR+LAG
Sbjct: 359 ESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAG 418
Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
+RDRGEWQ+TFQVLKEMKS GV+PD FYNV+IDTFGK+NCL HAM FDRMLSEGIEPD
Sbjct: 419 FRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPD 478
Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
+TWNTLIDCH K GR+ AEE+FE M+ RG PC TTYNIMIN G+QERW+D+KRLLG
Sbjct: 479 RVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLG 538
Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE------------------------G 570
M++QG+LPNVVT+TTLVD+YG+SGRF+DAIECLE G
Sbjct: 539 KMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRG 598
Query: 571 LSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYT 630
LS+QAVNAFRVM +DGLKPS LALNSLINAFGED+RDAEAFAVLQYMKENG+KPDVVTYT
Sbjct: 599 LSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYT 658
Query: 631 TLMKALIRVDKFHKVPAVYEEMILSGCTPDRKARAMLRSALRYMKQTLK 679
TLMKALIRVDKF KVP VYEEMI+SGC PDRKAR+MLRSALRYMKQTL+
Sbjct: 659 TLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSMLRSALRYMKQTLR 707
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 214 bits (544), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 149/543 (27%), Positives = 249/543 (45%), Gaps = 45/543 (8%)
Query: 151 SWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRLTPLTYNALISACARNDDLE 210
S + + L Y L I+ + + L+E+ ++ R TP+ +N L SA AR +
Sbjct: 29 SSITEAKLSYKERLRNGIVDIKVNDAIDLFES-MIQSRPLPTPIDFNRLCSAVARTKQYD 87
Query: 211 KALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKI--DSSLLQKLYK-EIECDKIE----- 262
L M +G D +++I R K+ S+L + +K E D I
Sbjct: 88 LVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLV 147
Query: 263 ----LDGQL---------------------LNDVIVGFAKAGDASKAMRFLGMAQGVGLS 297
L+G++ ++ +I G G S+A+ + G
Sbjct: 148 NGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQ 207
Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
P TY V+ L SG + A +F +++E +K Y+ ++ K G DA +
Sbjct: 208 PDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSL 267
Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
+EME G+ D TYS LI N G+W+ +L+EM + P+ +S ++ +
Sbjct: 268 FNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVK 327
Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTIT 477
G+ ++ EM + G+ PDT YN +ID F K NCLH A FD M+S+G EPD +T
Sbjct: 328 EGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVT 387
Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
++ LI+ + K R D LF E+ +G P T TYN ++ + + K L M
Sbjct: 388 YSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMV 447
Query: 538 AQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSL 597
++G+ P+VVTY L+D +G + A+E E + + T G+ N+ ++ +
Sbjct: 448 SRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRM-------TLGIGIYNIIIHGM 500
Query: 598 INAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVPAVYEEMILSGC 657
NA D +A+++ + + G+KPDVVTY ++ L + + ++ +M GC
Sbjct: 501 CNASKVD----DAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGC 556
Query: 658 TPD 660
TPD
Sbjct: 557 TPD 559
Score = 159 bits (402), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 105/399 (26%), Positives = 183/399 (45%), Gaps = 8/399 (2%)
Query: 167 SILIHALGRSEKLYEAFLLSQRQ-----RLTPLTYNALISACARNDDLEKALNLMSKMRQ 221
S LI+ L ++ EA +L R + +TY +++ ++ + AL+L KM +
Sbjct: 179 STLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEE 238
Query: 222 DGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDA 281
+ YS+VI SL + D +L L+ E+E I+ D + +I G G
Sbjct: 239 RNIKASVVQYSIVIDSLCKDGSFDDAL--SLFNEMEMKGIKADVVTYSSLIGGLCNDGKW 296
Query: 282 SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNAL 341
+ L G + P T++A+I G+ +EA+ ++ E+ G+ P T YN+L
Sbjct: 297 DDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSL 356
Query: 342 LKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA 401
+ G+ K L +A + M G PD TYS+LI++Y A R + + +E+
Sbjct: 357 IDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGL 416
Query: 402 KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA 461
PN+ Y+ ++ G+ G+ ++ +EM S GV P Y +++D L+ A+
Sbjct: 417 IPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALE 476
Query: 462 AFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLG 521
F++M + +N +I + D A LF + ++G P TYN+MI L
Sbjct: 477 IFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLC 536
Query: 522 EQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY-GQSG 559
++ + L M+ G P+ TY L+ + G SG
Sbjct: 537 KKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSG 575
Score = 139 bits (350), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 103/400 (25%), Positives = 179/400 (44%), Gaps = 9/400 (2%)
Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
+ +L LC S +S LA + +++ N+ S + YSI+I +L + +A L
Sbjct: 213 YGPVLNRLCKSGNSA-LALDLFRKMEERNIKASV-VQYSIVIDSLCKDGSFDDALSLFNE 270
Query: 189 QRLTPL-----TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
+ + TY++LI + + ++ +M D + +S +I + K
Sbjct: 271 MEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGK 330
Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
+ + ++LY E+ I D N +I GF K +A + + G P TY
Sbjct: 331 LLEA--KELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTY 388
Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
+ +I + + R + +F E+ GL P T YN L+ G+ + G L A+ + EM
Sbjct: 389 SILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVS 448
Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
GV P TY +L+D + G A + ++M+ S IY+ I+ G + +
Sbjct: 449 RGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDD 508
Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
+ + + GV+PD YNVMI K L A F +M +G PD T+N LI
Sbjct: 509 AWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIR 568
Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQ 523
H + EL EEM+ G+ ++T ++I++L ++
Sbjct: 569 AHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDR 608
>sp|Q9LYZ9|PP362_ARATH Pentatricopeptide repeat-containing protein At5g02860
OS=Arabidopsis thaliana GN=At5g02860 PE=2 SV=1
Length = 819
Score = 213 bits (542), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 159/588 (27%), Positives = 257/588 (43%), Gaps = 42/588 (7%)
Query: 110 LNRVEFKLAESYRAVPAPLWHSLLKNL--CSSNSSIDLAYAVVSWLQKHNLCYSY--ELL 165
L+ V +L E ++ P LL L + DLA W K S +
Sbjct: 116 LDSVLSELFEPFKDKPESTSSELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSV 175
Query: 166 YSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
+I+I LG+ ++ A L L +Y +LISA A + +A+N+ KM
Sbjct: 176 VAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKME 235
Query: 221 QDGYHCDFINYSLVIQSL----TRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFA 276
+DG I Y++++ T NKI +SL++K+ + D I D N +I
Sbjct: 236 EDGCKPTLITYNVILNVFGKMGTPWNKI-TSLVEKM----KSDGIAPDAYTYNTLITCCK 290
Query: 277 KAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTK 336
+ +A + + G S TY A++ S R EA V E+ +G P
Sbjct: 291 RGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIV 350
Query: 337 AYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM 396
YN+L+ Y + G L +A + ++M G PD TY+ L+ + AG+ ESA + +EM
Sbjct: 351 TYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEM 410
Query: 397 EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
+ KPN ++ + Y +RG++ ++ E+ G+ PD +N ++ FG+
Sbjct: 411 RNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMD 470
Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
F M G P+ T+NTLI + +CG +++A ++ M + G P +TYN +
Sbjct: 471 SEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTV 530
Query: 517 INLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ---------------SGRF 561
+ L WE +++L M PN +TY +L+ Y SG
Sbjct: 531 LAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVI 590
Query: 562 DDAIECLEGLS---------DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFA 612
+ L+ L +A AF ++ G P LNS+++ +G Q A+A
Sbjct: 591 EPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANG 650
Query: 613 VLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVPAVYEEMILSGCTPD 660
VL YMKE G P + TY +LM R F K + E++ G PD
Sbjct: 651 VLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPD 698
Score = 208 bits (529), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 127/488 (26%), Positives = 234/488 (47%), Gaps = 19/488 (3%)
Query: 160 YSYE-LLYSILIHALGRSEKLYEAFLLSQRQRL---TP--LTYNALISACARNDDLEKAL 213
+SY+ + Y+ L+ G+S + EA + L +P +TYN+LISA AR+ L++A+
Sbjct: 310 FSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAM 369
Query: 214 NLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIV 273
L ++M + G D Y+ ++ R K++S++ +++E+ + + N I
Sbjct: 370 ELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAM--SIFEEMRNAGCKPNICTFNAFIK 427
Query: 274 GFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKP 333
+ G ++ M+ GLSP T+ ++ +G E VF+E+K +G P
Sbjct: 428 MYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVP 487
Query: 334 RTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVL 393
+ +N L+ Y + G + A V M +GV PD TY+ ++ A A G WE + VL
Sbjct: 488 ERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVL 547
Query: 394 KEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKY 453
EME KPN Y +L Y + E + +E+ S +EP ++ K
Sbjct: 548 AEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKC 607
Query: 454 NCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTY 513
+ L A AF + G PD T N+++ + + +A + + M+ERG+ P TY
Sbjct: 608 DLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATY 667
Query: 514 NIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSD 573
N ++ + + + +L + A+G+ P++++Y T++ Y ++ R DA
Sbjct: 668 NSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRI------ 721
Query: 574 QAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
F MR G+ P + N+ I ++ D EA V++YM ++G +P+ TY +++
Sbjct: 722 -----FSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIV 776
Query: 634 KALIRVDK 641
++++
Sbjct: 777 DGYCKLNR 784
Score = 205 bits (521), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 126/470 (26%), Positives = 230/470 (48%), Gaps = 17/470 (3%)
Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
+TYNAL+ ++ ++A+ ++++M +G+ + Y+ +I + R +D ++ +L
Sbjct: 315 VTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAM--ELK 372
Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
++ + D ++ GF +AG AM + G P T+ A I N
Sbjct: 373 NQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNR 432
Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
G+ E +F+E+ GL P +N LL + + G + V EM+R+G +P+ T+
Sbjct: 433 GKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETF 492
Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
+ LI AY+ G +E A V + M + P+ Y+ +LA G W+++ +VL EM+
Sbjct: 493 NTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMED 552
Query: 434 SGVEPDTHFYNVMIDTF--GKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
+P+ Y ++ + GK L H++A + + S IEP + TL+ KC
Sbjct: 553 GRCKPNELTYCSLLHAYANGKEIGLMHSLA--EEVYSGVIEPRAVLLKTLVLVCSKCDLL 610
Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
AE F E++ERG+ P TT N M+++ G ++ +L M+ +G P++ TY +L
Sbjct: 611 PEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSL 670
Query: 552 VDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAF 611
+ ++ +S F + E L R + G+KP ++ N++I A+ + R +A
Sbjct: 671 MYMHSRSADFGKSEEIL-----------REILAKGIKPDIISYNTVIYAYCRNTRMRDAS 719
Query: 612 AVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVPAVYEEMILSGCTPDR 661
+ M+ +G+ PDV+TY T + + F + V MI GC P++
Sbjct: 720 RIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQ 769
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/412 (21%), Positives = 172/412 (41%), Gaps = 42/412 (10%)
Query: 166 YSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISACARNDDLEKALNLMSKMR 220
Y+ L+ R+ K+ A + + R P T+NA I + + + ++
Sbjct: 387 YTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEIN 446
Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
G D + ++ ++ + N +DS + ++KE++ + + N +I +++ G
Sbjct: 447 VCGLSPDIVTWNTLLAVFGQ-NGMDSEV-SGVFKEMKRAGFVPERETFNTLISAYSRCGS 504
Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
+AM G++P +TY V+ AL+ G ++E V E+++ KP Y +
Sbjct: 505 FEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCS 564
Query: 341 LLKGYV-----------------------------------KMGYLKDAEFVVSEMERSG 365
LL Y K L +AE SE++ G
Sbjct: 565 LLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERG 624
Query: 366 VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF 425
PD T + ++ Y A VL M+ P+ Y+ ++ + ++ ++
Sbjct: 625 FSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSE 684
Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
++L+E+ + G++PD YN +I + + + A F M + GI PD IT+NT I +
Sbjct: 685 EILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSY 744
Query: 486 FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
++ A + M + G P TYN +++ + R ++ K + ++R
Sbjct: 745 AADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLR 796
>sp|O64624|PP163_ARATH Pentatricopeptide repeat-containing protein At2g18940
OS=Arabidopsis thaliana GN=At2g18940 PE=2 SV=1
Length = 822
Score = 213 bits (542), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 137/523 (26%), Positives = 247/523 (47%), Gaps = 32/523 (6%)
Query: 168 ILIHALGR------SEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQ 221
I + LGR + KL + L Q L Y ++ A +R EKA++L +M++
Sbjct: 180 IFVRILGRESQYSVAAKLLDKIPL-QEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKE 238
Query: 222 DGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDA 281
G + Y++++ + + +L L E+ ++ D + V+ A+ G
Sbjct: 239 MGPSPTLVTYNVILDVFGKMGRSWRKILGVL-DEMRSKGLKFDEFTCSTVLSACAREGLL 297
Query: 282 SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNAL 341
+A F + G P T TY A++ +G EA +V +E++E+ + YN L
Sbjct: 298 REAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNEL 357
Query: 342 LKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA 401
+ YV+ G+ K+A V+ M + GV+P+ TY+ +IDAY AG+ + A + M+ +
Sbjct: 358 VAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGC 417
Query: 402 KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA 461
PN+ Y+ +L+ + ++L +MKS+G P+ +N M+ G
Sbjct: 418 VPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNR 477
Query: 462 AFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLG 521
F M S G EPD T+NTLI + +CG A +++ EM G+ C TTYN ++N L
Sbjct: 478 VFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALA 537
Query: 522 EQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSG------RFDDAIE--------- 566
+ W + ++ +M+++G P +Y+ ++ Y + G R ++ I+
Sbjct: 538 RKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWM 597
Query: 567 -----CLEGLSDQAV----NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM 617
L +A+ AF + + G KP + NS+++ F + +A +L+ +
Sbjct: 598 LLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESI 657
Query: 618 KENGLKPDVVTYTTLMKALIRVDKFHKVPAVYEEMILSGCTPD 660
+E+GL PD+VTY +LM +R + K + + + S PD
Sbjct: 658 REDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPD 700
Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 131/537 (24%), Positives = 233/537 (43%), Gaps = 56/537 (10%)
Query: 166 YSILIHALGRSEKLYEAFL------LSQRQRLTPLTYNALISACARNDDLEKALNLMSKM 219
Y++++ G+ + + L S+ + T + ++SACAR L +A +++
Sbjct: 248 YNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAEL 307
Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
+ GY + Y+ ++Q + +L + KE+E + D N+++ + +AG
Sbjct: 308 KSCGYEPGTVTYNALLQVFGKAGVYTEAL--SVLKEMEENSCPADSVTYNELVAAYVRAG 365
Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
+ +A + M G+ P TY VI A +G+ EA +F +KE+G P T YN
Sbjct: 366 FSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYN 425
Query: 340 ALL---------KGYVKM--------------------------GYLKDAEFVVSEMERS 364
A+L +KM G K V EM+
Sbjct: 426 AVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSC 485
Query: 365 GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRT 424
G PD T++ LI AY G A + EM + Y+ +L +G+W+
Sbjct: 486 GFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSG 545
Query: 425 FQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG-IEPDTITWNTLID 483
V+ +MKS G +P Y++M+ + K + + + + EG I P + TL+
Sbjct: 546 ENVISDMKSKGFKPTETSYSLMLQCYAKGGN-YLGIERIENRIKEGQIFPSWMLLRTLLL 604
Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
+FKC +E F ++ GY P +N M+++ ++ + +L ++R GL P
Sbjct: 605 ANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSP 664
Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
++VTY +L+D+Y + G EC +A + + LKP ++ N++I F
Sbjct: 665 DLVTYNSLMDMYVRRG------ECW-----KAEEILKTLEKSQLKPDLVSYNTVIKGFCR 713
Query: 604 DQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVPAVYEEMILSGCTPD 660
EA +L M E G++P + TY T + + F ++ V E M + C P+
Sbjct: 714 RGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPN 770
Score = 166 bits (420), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 105/367 (28%), Positives = 178/367 (48%), Gaps = 14/367 (3%)
Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGY-LKDAEFVVSEM 361
Y ++ A S +G+ +A +FE +KE G P YN +L + KMG + V+ EM
Sbjct: 213 YTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEM 272
Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
G+ DE T S ++ A A G A+ E++ +P + Y+ +L + G +
Sbjct: 273 RSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVY 332
Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
VLKEM+ + D+ YN ++ + + A + M +G+ P+ IT+ T+
Sbjct: 333 TEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTV 392
Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
ID + K G+ D A +LF M+E G P T TYN +++LLG++ R ++ ++L +M++ G
Sbjct: 393 IDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGC 452
Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN-AFRVMRTDGLKPSNLALNSLINA 600
PN T+ T++ + G G D+ VN FR M++ G +P N+LI+A
Sbjct: 453 SPNRATWNTMLALCGNKGM------------DKFVNRVFREMKSCGFEPDRDTFNTLISA 500
Query: 601 FGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVPAVYEEMILSGCTPD 660
+G + +A + M G V TY L+ AL R + V +M G P
Sbjct: 501 YGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPT 560
Query: 661 RKARAML 667
+ +++
Sbjct: 561 ETSYSLM 567
Score = 154 bits (390), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 114/482 (23%), Positives = 210/482 (43%), Gaps = 18/482 (3%)
Query: 166 YSILIHALGRSEKLYEAF--LLSQRQRLTP---LTYNALISACARNDDLEKALNLMSKMR 220
Y+ L+ G++ EA L + P +TYN L++A R ++A ++ M
Sbjct: 319 YNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMT 378
Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
+ G + I Y+ VI + + K D +L KL+ ++ + N V+ K
Sbjct: 379 KKGVMPNAITYTTVIDAYGKAGKEDEAL--KLFYSMKEAGCVPNTCTYNAVLSLLGKKSR 436
Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
+++ ++ L + G SP AT+ ++ N G VF E+K G +P +N
Sbjct: 437 SNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNT 496
Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
L+ Y + G DA + EM R+G TY+ L++A A G W S V+ +M+
Sbjct: 497 LISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKG 556
Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
KP YS +L Y G + ++ +K + P ++ K L +
Sbjct: 557 FKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSE 616
Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
AF G +PD + +N+++ + YD+AE + E ++E G P TYN ++++
Sbjct: 617 RAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMY 676
Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
+ + +L + L P++V+Y T++ + C GL +AV
Sbjct: 677 VRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGF-----------CRRGLMQEAVRMLS 725
Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVD 640
M G++P N+ ++ + AE V++ M +N +P+ +T+ ++ R
Sbjct: 726 EMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAG 785
Query: 641 KF 642
K+
Sbjct: 786 KY 787
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 151/327 (46%), Gaps = 16/327 (4%)
Query: 340 ALLKGYVKMGYLKDAEFVVSEM---ERSGVLP-DEHTYSLLIDAYANAGRWESARIVLKE 395
+L+KG G+ + A F+ + SG L D + + ++ A +L +
Sbjct: 141 SLVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQVIEIFVRILGRESQYSVAAKLLDK 200
Query: 396 MEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYN- 454
+ + + Y+ IL Y G++++ + + MK G P YNV++D FGK
Sbjct: 201 IPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGR 260
Query: 455 CLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYN 514
+ D M S+G++ D T +T++ + G A+E F E++ GY P T TYN
Sbjct: 261 SWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYN 320
Query: 515 IMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQ 574
++ + G+ + + +L M + VTY LV Y ++G S +
Sbjct: 321 ALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAG-----------FSKE 369
Query: 575 AVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMK 634
A +M G+ P+ + ++I+A+G+ ++ EA + MKE G P+ TY ++
Sbjct: 370 AAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLS 429
Query: 635 ALIRVDKFHKVPAVYEEMILSGCTPDR 661
L + + +++ + +M +GC+P+R
Sbjct: 430 LLGKKSRSNEMIKMLCDMKSNGCSPNR 456
Score = 96.7 bits (239), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 130/315 (41%), Gaps = 39/315 (12%)
Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
TYNAL++A AR D N++S M+ G+ +YSL++Q + ++++
Sbjct: 528 TYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLG--IERIEN 585
Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
I+ +I LL +++ K AL+ S
Sbjct: 586 RIKEGQIFPSWMLLRTLLLANFKC-----------------------------RALAGS- 615
Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
E F K+ G KP +N++L + + AE ++ + G+ PD TY+
Sbjct: 616 -----ERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYN 670
Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
L+D Y G A +LK +E S KP+ Y+ ++ G+ RG Q ++L EM
Sbjct: 671 SLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTER 730
Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
G+ P YN + + + M P+ +T+ ++D + + G+Y A
Sbjct: 731 GIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEA 790
Query: 495 EELFEEMQERGYFPC 509
+ +++ + PC
Sbjct: 791 MDFVSKIKT--FDPC 803
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 207 bits (526), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 142/525 (27%), Positives = 244/525 (46%), Gaps = 26/525 (4%)
Query: 124 VPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF 183
V A + LLK LC+ + D V+ + + C Y+IL+ L + EA
Sbjct: 120 VDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELG-CIPNVFSYNILLKGLCDENRSQEAL 178
Query: 184 LL-----SQRQRLTP---LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVI 235
L R +P ++Y +I+ + D +KA + +M G D + Y+ +I
Sbjct: 179 ELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSII 238
Query: 236 QSLTRTNKIDSSL--LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQG 293
+L + +D ++ L + K + + D N ++ G+ +G +A+ FL +
Sbjct: 239 AALCKAQAMDKAMEVLNTMVK----NGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRS 294
Query: 294 VGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKD 353
G+ P TY+ ++ L +GR +EA +F+ + + GLKP Y LL+GY G L +
Sbjct: 295 DGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVE 354
Query: 354 AEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA 413
++ M R+G+ PD + +S+LI AYA G+ + A +V +M PN+ Y ++
Sbjct: 355 MHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIG 414
Query: 414 GYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
G + ++M G+ P YN +I N A ML GI
Sbjct: 415 ILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICL 474
Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
+TI +N++ID H K GR +E+LFE M G P TYN +IN + ++ +LL
Sbjct: 475 NTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLL 534
Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLA 593
M + GL PN VTY+TL++ Y + R +DA+ F+ M + G+ P +
Sbjct: 535 SGMVSVGLKPNTVTYSTLINGYCKISRMEDALV-----------LFKEMESSGVSPDIIT 583
Query: 594 LNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
N ++ + +R A A + + E+G + ++ TY ++ L +
Sbjct: 584 YNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCK 628
Score = 202 bits (514), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 138/510 (27%), Positives = 231/510 (45%), Gaps = 52/510 (10%)
Query: 191 LTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT---RTNKID 245
+TP TY LI C R L+ + + + G+ D I ++ +++ L RT+
Sbjct: 83 VTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 142
Query: 246 SSLLQKLYKEIEC---------------------DKIELDGQLLND-------------- 270
+L+++ E+ C + +EL + +D
Sbjct: 143 DIVLRRM-TELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTT 201
Query: 271 VIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESG 330
VI GF K GD+ KA G+ P TY ++I AL + +A V + ++G
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNG 261
Query: 331 LKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESAR 390
+ P YN++L GY G K+A + +M GV PD TYSLL+D GR AR
Sbjct: 262 VMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEAR 321
Query: 391 IVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTF 450
+ M KP Y +L GY +G +L M +G+ PD + ++++I +
Sbjct: 322 KIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAY 381
Query: 451 GKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCT 510
K + AM F +M +G+ P+ +T+ +I K GR + A FE+M + G P
Sbjct: 382 AKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGN 441
Query: 511 TTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEG 570
YN +I+ L +WE + L+ M +G+ N + + +++D + C EG
Sbjct: 442 IVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSH-----------CKEG 490
Query: 571 LSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYT 630
++ F +M G+KP+ + N+LIN + + EA +L M GLKP+ VTY+
Sbjct: 491 RVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYS 550
Query: 631 TLMKALIRVDKFHKVPAVYEEMILSGCTPD 660
TL+ ++ + +++EM SG +PD
Sbjct: 551 TLINGYCKISRMEDALVLFKEMESSGVSPD 580
Score = 156 bits (395), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 117/463 (25%), Positives = 210/463 (45%), Gaps = 49/463 (10%)
Query: 166 YSILIHALGRSE---KLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
Y+ +I AL +++ K E + + P +TYN+++ + ++A+ + KMR
Sbjct: 234 YNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMR 293
Query: 221 QDGYHCDFINYSLVIQSLTRTNK-------IDSSLLQKLYKEIEC--------------- 258
DG D + YSL++ L + + DS + L EI
Sbjct: 294 SDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALV 353
Query: 259 -----------DKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVI 307
+ I D + + +I +AK G +AM + GL+P TY AVI
Sbjct: 354 EMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVI 413
Query: 308 TALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVL 367
L SGR +A FE++ + GL P YN+L+ G + AE ++ EM G+
Sbjct: 414 GILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGIC 473
Query: 368 PDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQV 427
+ ++ +ID++ GR + + + M KPN Y+ ++ GY G+ ++
Sbjct: 474 LNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKL 533
Query: 428 LKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFK 487
L M S G++P+T Y+ +I+ + K + + A+ F M S G+ PD IT+N ++ F+
Sbjct: 534 LSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQ 593
Query: 488 CGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVT 547
R A+EL+ + E G +TYNI+++ L + + +D ++ N+ L T
Sbjct: 594 TRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEART 653
Query: 548 YTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPS 590
+ ++D + GR +D+A + F ++GL P+
Sbjct: 654 FNIMIDALLKVGR-----------NDEAKDLFVAFSSNGLVPN 685
Score = 146 bits (369), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 97/398 (24%), Positives = 181/398 (45%), Gaps = 17/398 (4%)
Query: 268 LNDVIVGFAKAGDASKAMRFLGMAQGVG--LSPKTATYAAVITALSNSGRTIEAEAVFEE 325
LN + A+ A+ R+ MA+ ++P TY +I +GR A
Sbjct: 53 LNRALADVARDSPAAAVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGN 112
Query: 326 LKESGLKPRTKAYNALLKGYVKMGYLKDA-EFVVSEMERSGVLPDEHTYSLLIDAYANAG 384
+ + G + A+ LLKG DA + V+ M G +P+ +Y++L+ +
Sbjct: 113 VIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDEN 172
Query: 385 RWESARIVLKEM---EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTH 441
R + A +L M + P+ Y+ ++ G+ G+ + + EM G+ PD
Sbjct: 173 RSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVV 232
Query: 442 FYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM 501
YN +I K + AM + M+ G+ PD +T+N+++ + G+ A ++M
Sbjct: 233 TYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKM 292
Query: 502 QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
+ G P TY+++++ L + R + +++ +M +GL P + TY TL+ Y G
Sbjct: 293 RSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKG-- 350
Query: 562 DDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENG 621
A+ + GL D +M +G+ P + + LI A+ + + +A V M++ G
Sbjct: 351 --ALVEMHGLLD-------LMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQG 401
Query: 622 LKPDVVTYTTLMKALIRVDKFHKVPAVYEEMILSGCTP 659
L P+ VTY ++ L + + +E+MI G +P
Sbjct: 402 LNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSP 439
Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 166/348 (47%), Gaps = 6/348 (1%)
Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
++ LI A A+ +++A+ + SKMRQ G + + + Y VI L ++ +++ ++L Y
Sbjct: 373 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAML---YF 429
Query: 255 EIECDKIELDGQLL-NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
E D+ G ++ N +I G +A + G+ T + ++I +
Sbjct: 430 EQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKE 489
Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
GR IE+E +FE + G+KP YN L+ GY G + +A ++S M G+ P+ TY
Sbjct: 490 GRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTY 549
Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
S LI+ Y R E A ++ KEME S P+ Y+ IL G ++ +
Sbjct: 550 STLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITE 609
Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
SG + + YN+++ K A+ F + ++ + T+N +ID K GR D
Sbjct: 610 SGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDE 669
Query: 494 AEELFEEMQERGYFPCTTTYNIMI-NLLGEQERWEDVKRLLGNMRAQG 540
A++LF G P TY +M N++G Q E++ +L +M G
Sbjct: 670 AKDLFVAFSSNGLVPNYWTYRLMAENIIG-QGLLEELDQLFLSMEDNG 716
Score = 120 bits (302), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 149/325 (45%), Gaps = 20/325 (6%)
Query: 359 SEMERSG---VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGY 415
+ M R+G V PD TY +LI AGR + L + + ++ ++ +L G
Sbjct: 73 NRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGL 132
Query: 416 -RDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSE---GI 471
D+ VL+ M G P+ YN+++ N A+ M + G
Sbjct: 133 CADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGS 192
Query: 472 EPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKR 531
PD +++ T+I+ FK G D+A + EM +RG P TYN +I L + + +
Sbjct: 193 PPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAME 252
Query: 532 LLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSN 591
+L M G++P+ +TY +++ Y C G +A+ + MR+DG++P
Sbjct: 253 VLNTMVKNGVMPDCMTYNSILHGY-----------CSSGQPKEAIGFLKKMRSDGVEPDV 301
Query: 592 LALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVPAVYEE 651
+ + L++ ++ R EA + M + GLKP++ TY TL++ ++ + +
Sbjct: 302 VTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDL 361
Query: 652 MILSGCTPDRKARAMLRSALRYMKQ 676
M+ +G PD ++L A Y KQ
Sbjct: 362 MVRNGIHPDHYVFSILICA--YAKQ 384
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 151/335 (45%), Gaps = 15/335 (4%)
Query: 128 LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL--GR---SEKLYEA 182
+++SL+ LC+ N + A ++ + +C + SI+ GR SEKL+E
Sbjct: 443 VYNSLIHGLCTCNKW-ERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFE- 500
Query: 183 FLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTR 240
L R + P +TYN LI+ +++A+ L+S M G + + YS +I +
Sbjct: 501 --LMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCK 558
Query: 241 TNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKT 300
++++ +L+ L+KE+E + D N ++ G + + A G +
Sbjct: 559 ISRMEDALV--LFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIEL 616
Query: 301 ATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSE 360
+TY ++ L + T +A +F+ L LK + +N ++ +K+G +A+ +
Sbjct: 617 STYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVA 676
Query: 361 MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
+G++P+ TY L+ + G E + ME + +S + + I+ RGE
Sbjct: 677 FSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGE 736
Query: 421 WQR--TFQVLKEMKSSGVEPDTHFYNVMIDTFGKY 453
R T+ + + K +E T + + + GKY
Sbjct: 737 ITRAGTYLSMIDEKHFSLEASTASLFIDLLSGGKY 771
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 201 bits (511), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 130/432 (30%), Positives = 200/432 (46%), Gaps = 25/432 (5%)
Query: 271 VIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIE-AEAVFEELKES 329
V+ +++ KA+ + +AQ G P +Y AV+ A S R I AE VF+E+ ES
Sbjct: 140 VVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLES 199
Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
+ P YN L++G+ G + A + +ME G LP+ TY+ LID Y + +
Sbjct: 200 QVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDG 259
Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
+L+ M + +PN Y+ ++ G G + VL EM G D YN +I
Sbjct: 260 FKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKG 319
Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
+ K H A+ ML G+ P IT+ +LI K G +RA E ++M+ RG P
Sbjct: 320 YCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPN 379
Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
TY +++ ++ + R+L M G P+VVTY L++ + +G+ +DAI LE
Sbjct: 380 ERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLE 439
Query: 570 -----GLS-------------------DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQ 605
GLS D+A+ R M G+KP + +SLI F E +
Sbjct: 440 DMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQR 499
Query: 606 RDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVPAVYEEMILSGCTPDRKARA 665
R EA + + M GL PD TYT L+ A K ++ EM+ G PD +
Sbjct: 500 RTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYS 559
Query: 666 MLRSALRYMKQT 677
+L + L +T
Sbjct: 560 VLINGLNKQSRT 571
Score = 192 bits (488), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 126/460 (27%), Positives = 223/460 (48%), Gaps = 8/460 (1%)
Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
+TYN LI + ++ L+ M G + I+Y++VI L R ++ + +
Sbjct: 241 VTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKE--VSFVL 298
Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
E+ LD N +I G+ K G+ +A+ GL+P TY ++I ++ +
Sbjct: 299 TEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKA 358
Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
G A ++++ GL P + Y L+ G+ + GY+ +A V+ EM +G P TY
Sbjct: 359 GNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTY 418
Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
+ LI+ + G+ E A VL++M+ P+ YS +L+G+ + +V +EM
Sbjct: 419 NALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVE 478
Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
G++PDT Y+ +I F + A ++ ML G+ PD T+ LI+ + G ++
Sbjct: 479 KGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEK 538
Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
A +L EM E+G P TY+++IN L +Q R + KRLL + + +P+ VTY TL++
Sbjct: 539 ALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIE 598
Query: 554 IYGQSGRFDDAIE-----CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDA 608
+ F + C++G+ +A F M KP A N +I+
Sbjct: 599 -NCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIR 657
Query: 609 EAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVPAV 648
+A+ + + M ++G VT L+KAL + K +++ +V
Sbjct: 658 KAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSV 697
Score = 172 bits (437), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 106/445 (23%), Positives = 208/445 (46%), Gaps = 12/445 (2%)
Query: 192 TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQK 251
T ++ ++ + +R ++KAL+++ + G+ ++Y+ V+ + R+ + + S +
Sbjct: 133 TSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKR-NISFAEN 191
Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
++KE+ ++ + N +I GF AG+ A+ + G P TY +I
Sbjct: 192 VFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYC 251
Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
+ + + + GL+P +YN ++ G + G +K+ FV++EM R G DE
Sbjct: 252 KLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEV 311
Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
TY+ LI Y G + A ++ EM P+ Y+ ++ G R + L +M
Sbjct: 312 TYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQM 371
Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
+ G+ P+ Y ++D F + ++ A M G P +T+N LI+ H G+
Sbjct: 372 RVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKM 431
Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
+ A + E+M+E+G P +Y+ +++ ++ R+ M +G+ P+ +TY++L
Sbjct: 432 EDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSL 491
Query: 552 VDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAF 611
+ + + R + +A + + M GL P +LINA+ + +A
Sbjct: 492 IQGFCEQRR-----------TKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKAL 540
Query: 612 AVLQYMKENGLKPDVVTYTTLMKAL 636
+ M E G+ PDVVTY+ L+ L
Sbjct: 541 QLHNEMVEKGVLPDVVTYSVLINGL 565
Score = 139 bits (349), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 107/458 (23%), Positives = 201/458 (43%), Gaps = 57/458 (12%)
Query: 166 YSILIHALGRSEKLYE-AFLLSQRQR----LTPLTYNALISACARNDDLEKALNLMSKMR 220
Y+++I+ L R ++ E +F+L++ R L +TYN LI + + +AL + ++M
Sbjct: 278 YNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEML 337
Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
+ G I Y+ +I S+ + ++ ++ + ++ + + + ++ GF++ G
Sbjct: 338 RHGLTPSVITYTSLIHSMCKAGNMNRAM--EFLDQMRVRGLCPNERTYTTLVDGFSQKGY 395
Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
++A R L G SP TY A+I +G+ +A AV E++KE GL P +Y+
Sbjct: 396 MNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYST 455
Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
+L G+ + + +A V EM G+ PD TYS LI + R + A + +EM
Sbjct: 456 VLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVG 515
Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKY------- 453
P+ F Y+ ++ Y G+ ++ Q+ EM GV PD Y+V+I+ K
Sbjct: 516 LPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAK 575
Query: 454 -----------------------NC--------------------LHHAMAAFDRMLSEG 470
NC + A F+ ML +
Sbjct: 576 RLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKN 635
Query: 471 IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVK 530
+PD +N +I H + G +A L++EM + G+ T T ++ L ++ + ++
Sbjct: 636 HKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELN 695
Query: 531 RLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
++ ++ L LV+I + G D ++ L
Sbjct: 696 SVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVL 733
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 197 bits (502), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 134/524 (25%), Positives = 252/524 (48%), Gaps = 27/524 (5%)
Query: 122 RAVPAPLW--HSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKL 179
R +P L+ ++K C+ N ID A +++ + KH C ++Y LIH+L + ++
Sbjct: 211 RKIPPTLFTFGVVMKAFCAVNE-IDSALSLLRDMTKHG-CVPNSVIYQTLIHSLSKCNRV 268
Query: 180 YEAFLLSQRQRLTPL-----TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLV 234
EA L + L T+N +I + D + +A ++++M G+ D I Y +
Sbjct: 269 NEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYL 328
Query: 235 IQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLG-MAQG 293
+ L + ++D++ + L+ I +I + N +I GF G A L M
Sbjct: 329 MNGLCKIGRVDAA--KDLFYRIPKPEI----VIFNTLIHGFVTHGRLDDAKAVLSDMVTS 382
Query: 294 VGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKD 353
G+ P TY ++I G A V +++ G KP +Y L+ G+ K+G + +
Sbjct: 383 YGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDE 442
Query: 354 AEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA 413
A V++EM G+ P+ ++ LI A+ R A + +EM KP+ + ++ +++
Sbjct: 443 AYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLIS 502
Query: 414 GYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
G + E + +L++M S GV +T YN +I+ F + + A + M+ +G
Sbjct: 503 GLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPL 562
Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
D IT+N+LI + G D+A LFE+M G+ P + NI+IN L E+
Sbjct: 563 DEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQ 622
Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLA 593
M +G P++VT+ +L++ ++GR +D + FR ++ +G+ P +
Sbjct: 623 KEMVLRGSTPDIVTFNSLINGLCRAGRIEDGL-----------TMFRKLQAEGIPPDTVT 671
Query: 594 LNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
N+L++ + +A +L E+G P+ T++ L++++I
Sbjct: 672 FNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSII 715
Score = 195 bits (496), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 142/539 (26%), Positives = 250/539 (46%), Gaps = 36/539 (6%)
Query: 161 SYELLYSILIHALGRSEKLYEAF---LLSQRQRLTPLTYNALISACARNDDLEKALNLMS 217
SY ++ IL+ G K+ +LS++ T T+ ++ A ++++ AL+L+
Sbjct: 184 SYNVVLEILVS--GNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLR 241
Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
M + G + + Y +I SL++ N+++ +L +L +E+ D + NDVI+G K
Sbjct: 242 DMTKHGCVPNSVIYQTLIHSLSKCNRVNEAL--QLLEEMFLMGCVPDAETFNDVILGLCK 299
Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
++A + + G +P TY ++ L GR A+ +F + KP
Sbjct: 300 FDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP----KPEIVI 355
Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERS-GVLPDEHTYSLLIDAYANAGRWESARIVLKEM 396
+N L+ G+V G L DA+ V+S+M S G++PD TY+ LI Y G A VL +M
Sbjct: 356 FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDM 415
Query: 397 EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
KPN + Y+ ++ G+ G+ + VL EM + G++P+T +N +I F K + +
Sbjct: 416 RNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRI 475
Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
A+ F M +G +PD T+N+LI + A L +M G T TYN +
Sbjct: 476 PEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTL 535
Query: 517 INLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE---------- 566
IN + ++ ++L+ M QG + +TY +L+ ++G D A
Sbjct: 536 INAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGH 595
Query: 567 --------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFA 612
C G+ ++AV + M G P + NSLIN R +
Sbjct: 596 APSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLT 655
Query: 613 VLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVPAVYEEMILSGCTPDRKARAMLRSAL 671
+ + ++ G+ PD VT+ TLM L + + + +E I G P+ + ++L ++
Sbjct: 656 MFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSI 714
Score = 150 bits (378), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 110/413 (26%), Positives = 186/413 (45%), Gaps = 31/413 (7%)
Query: 271 VIVGFAKAGDASKAM-RFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES 329
V++G A K + R L + G+ K + + +++ +G + + E++
Sbjct: 116 VLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNV 175
Query: 330 -GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
+P K+YN +L+ V K A V +M + P T+ +++ A+ +S
Sbjct: 176 YSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDS 235
Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
A +L++M PNS IY ++ Q+L+EM G PD +N +I
Sbjct: 236 ALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVIL 295
Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
K++ ++ A +RML G PD IT+ L++ K GR D A++LF + + P
Sbjct: 296 GLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----P 351
Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNM-RAQGLLPNVVTYTTLVDIYGQSGRFDDAIE- 566
+N +I+ R +D K +L +M + G++P+V TY +L+ Y + G A+E
Sbjct: 352 EIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEV 411
Query: 567 -----------------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
C G D+A N M DGLKP+ + N LI+AF +
Sbjct: 412 LHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCK 471
Query: 604 DQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVPAVYEEMILSG 656
+ R EA + + M G KPDV T+ +L+ L VD+ + +MI G
Sbjct: 472 EHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEG 524
Score = 120 bits (302), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 152/330 (46%), Gaps = 2/330 (0%)
Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
TYN+LI + + AL ++ MR G + +Y++++ + KID + +
Sbjct: 391 TYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEA--YNVLN 448
Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
E+ D ++ + N +I F K +A+ G P T+ ++I+ L
Sbjct: 449 EMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVD 508
Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
A + ++ G+ T YN L+ +++ G +K+A +V+EM G DE TY+
Sbjct: 509 EIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYN 568
Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
LI AG + AR + ++M P++ + ++ G G + + KEM
Sbjct: 569 SLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLR 628
Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
G PD +N +I+ + + + F ++ +EGI PDT+T+NTL+ K G A
Sbjct: 629 GSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDA 688
Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQE 524
L +E E G+ P T++I++ + QE
Sbjct: 689 CLLLDEGIEDGFVPNHRTWSILLQSIIPQE 718
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 79/183 (43%), Gaps = 25/183 (13%)
Query: 503 ERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY------G 556
+ GY Y ++I LG ++ + RLL M+ +G++ + +++ Y G
Sbjct: 104 QNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPG 163
Query: 557 QSGR-----------------FDDAIECL--EGLSDQAVNAFRVMRTDGLKPSNLALNSL 597
Q+ R ++ +E L A N F M + + P+ +
Sbjct: 164 QTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVV 223
Query: 598 INAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVPAVYEEMILSGC 657
+ AF A ++L+ M ++G P+ V Y TL+ +L + ++ ++ + EEM L GC
Sbjct: 224 MKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGC 283
Query: 658 TPD 660
PD
Sbjct: 284 VPD 286
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 196 bits (497), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 138/505 (27%), Positives = 229/505 (45%), Gaps = 34/505 (6%)
Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
T + +I+ R L A + M K+ + GY D + ++ ++ L ++ +L
Sbjct: 125 TLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEAL------ 178
Query: 255 EIECDKIELDGQ----LLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITAL 310
E+ +E+ + LN ++ G G S A+ + G P TY V+ +
Sbjct: 179 ELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVM 238
Query: 311 SNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDE 370
SG+T A + +++E +K Y+ ++ G K G L +A + +EME G D
Sbjct: 239 CKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADI 298
Query: 371 HTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKE 430
TY+ LI + NAGRW+ +L++M PN +S ++ + G+ + Q+LKE
Sbjct: 299 ITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKE 358
Query: 431 MKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGR 490
M G+ P+T YN +ID F K N L A+ D M+S+G +PD +T+N LI+ + K R
Sbjct: 359 MMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANR 418
Query: 491 YDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT 550
D ELF EM RG T TYN ++ + + E K+L M ++ + P++V+Y
Sbjct: 419 IDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKI 478
Query: 551 LVDIYGQSGRFDDAIE------------------------CLEGLSDQAVNAFRVMRTDG 586
L+D +G + A+E C D A + F + G
Sbjct: 479 LLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKG 538
Query: 587 LKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVP 646
+K A N +I+ ++A + + M E G PD +TY L++A + D
Sbjct: 539 VKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAA 598
Query: 647 AVYEEMILSGCTPDRKARAMLRSAL 671
+ EEM SG D M+ + L
Sbjct: 599 ELIEEMKSSGFPADVSTVKMVINML 623
Score = 165 bits (417), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 110/440 (25%), Positives = 203/440 (46%), Gaps = 13/440 (2%)
Query: 210 EKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLN 269
+ A++L M Q I+++ + ++ +T + + L+ L K++E I L+
Sbjct: 70 DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYE--LVLALCKQMESKGIAHSIYTLS 127
Query: 270 DVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES 329
+I F + S A +G +G P T + ++ L R EA + + + E
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
G KP N L+ G G + DA ++ M +G P+E TY +++ +G+ A
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247
Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
+L++ME + K ++ YS I+ G G F + EM+ G + D YN +I
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307
Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
F M+ I P+ +T++ LID K G+ A++L +EM +RG P
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPN 367
Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
T TYN +I+ ++ R E+ +++ M ++G P+++T+ L++ Y ++ R DD +E
Sbjct: 368 TITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLE--- 424
Query: 570 GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
FR M G+ + + N+L+ F + + A + Q M ++PD+V+Y
Sbjct: 425 --------LFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSY 476
Query: 630 TTLMKALIRVDKFHKVPAVY 649
L+ L + K ++
Sbjct: 477 KILLDGLCDNGELEKALEIF 496
Score = 142 bits (357), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 170/366 (46%), Gaps = 11/366 (3%)
Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
G++ T + +I + A + ++ + G +P T +N LL G + +A
Sbjct: 118 GIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEA 177
Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
+V M G P T + L++ G+ A +++ M + +PN Y +L
Sbjct: 178 LELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNV 237
Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
G+ ++L++M+ ++ D Y+++ID K L +A F+ M +G + D
Sbjct: 238 MCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKAD 297
Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
IT+NTLI GR+D +L +M +R P T++++I+ ++ + + +LL
Sbjct: 298 IITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLK 357
Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLAL 594
M +G+ PN +TY +L+D + + R ++AI+ ++ +M + G P +
Sbjct: 358 EMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVD-----------LMISKGCDPDIMTF 406
Query: 595 NSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVPAVYEEMIL 654
N LIN + + R + + + M G+ + VTY TL++ + K +++EM+
Sbjct: 407 NILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVS 466
Query: 655 SGCTPD 660
PD
Sbjct: 467 RRVRPD 472
Score = 139 bits (351), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 114/489 (23%), Positives = 203/489 (41%), Gaps = 85/489 (17%)
Query: 128 LWHSLLKNLC---SSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFL 184
++++LL LC + +++L +V K L + + L++ L + K+ +A +
Sbjct: 160 IFNTLLNGLCLECRVSEALELVDRMVEMGHKPTL-----ITLNTLVNGLCLNGKVSDAVV 214
Query: 185 LSQRQRLT-----PLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT 239
L R T +TY +++ ++ A+ L+ KM + D + YS++I L
Sbjct: 215 LIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 274
Query: 240 RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPK 299
+ +D++ L+ E+E + D N +I GF AG + L +SP
Sbjct: 275 KDGSLDNAF--NLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPN 332
Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
T++ +I + G+ EA+ + +E+ + G+ P T YN+L+ G+ K L++A +V
Sbjct: 333 VVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVD 392
Query: 360 EMERSGVLPDEHTYSLLIDAYANA-----------------------------------G 384
M G PD T+++LI+ Y A G
Sbjct: 393 LMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSG 452
Query: 385 RWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS---------- 434
+ E A+ + +EM +P+ Y +L G D GE ++ ++ +++ S
Sbjct: 453 KLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYM 512
Query: 435 -------------------------GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSE 469
GV+ D YN+MI + + L A F +M E
Sbjct: 513 IIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEE 572
Query: 470 GIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDV 529
G PD +T+N LI H A EL EEM+ G+ +T ++IN+L E +
Sbjct: 573 GHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSSGELDKSF 632
Query: 530 KRLLGNMRA 538
+L RA
Sbjct: 633 LDMLSTTRA 641
Score = 120 bits (301), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/390 (23%), Positives = 179/390 (45%), Gaps = 17/390 (4%)
Query: 268 LNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELK 327
L+ +VG KA DA R M Q L P + + +A++ + + A+ ++++
Sbjct: 60 LSSGLVGI-KADDAVDLFR--DMIQSRPL-PTVIDFNRLFSAIAKTKQYELVLALCKQME 115
Query: 328 ESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRW- 386
G+ + ++ + + L A + ++ + G PD ++ L++ R
Sbjct: 116 SKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVS 175
Query: 387 ESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVM 446
E+ +V + +E+ H KP + ++ G G+ ++ M +G +P+ Y +
Sbjct: 176 EALELVDRMVEMGH-KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPV 234
Query: 447 IDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGY 506
++ K AM +M I+ D + ++ +ID K G D A LF EM+ +G+
Sbjct: 235 LNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGF 294
Query: 507 FPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE 566
TYN +I RW+D +LL +M + + PNVVT++ L+D + + G+ +A
Sbjct: 295 KADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREA-- 352
Query: 567 CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDV 626
DQ + + M G+ P+ + NSLI+ F ++ R EA ++ M G PD+
Sbjct: 353 ------DQLL---KEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDI 403
Query: 627 VTYTTLMKALIRVDKFHKVPAVYEEMILSG 656
+T+ L+ + ++ ++ EM L G
Sbjct: 404 MTFNILINGYCKANRIDDGLELFREMSLRG 433
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 194 bits (492), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 127/468 (27%), Positives = 216/468 (46%), Gaps = 26/468 (5%)
Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
TY+ LI+ R L AL ++ KM + GY + + S ++ + +I ++ L
Sbjct: 118 TYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAV--ALVD 175
Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
++ + + N +I G AS+AM + G P TY V+ L G
Sbjct: 176 QMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRG 235
Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
T A + ++++ L+P YN ++ G K ++ DA + EME G+ P+ TYS
Sbjct: 236 DTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYS 295
Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
LI N GRW A +L +M P+ F +S ++ + G+ ++ EM
Sbjct: 296 SLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR 355
Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
++P Y+ +I+ F ++ L A F+ M+S+ PD +T+NTLI K R +
Sbjct: 356 SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEG 415
Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
E+F EM +RG T TYNI+I L + + + + M + G+ PN++TY TL+D
Sbjct: 416 MEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDG 475
Query: 555 YGQSGRFDDAI------------------------ECLEGLSDQAVNAFRVMRTDGLKPS 590
++G+ + A+ C G + + F + G+KP
Sbjct: 476 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPD 535
Query: 591 NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
+A N++I+ F EA A+ + MKE+G P+ Y TL++A +R
Sbjct: 536 VVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLR 583
Score = 149 bits (376), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 111/439 (25%), Positives = 195/439 (44%), Gaps = 43/439 (9%)
Query: 166 YSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
++ LIH L K EA L R + P +TY +++ + D + A NL++KM
Sbjct: 189 FNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKME 248
Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
Q + Y+ +I L + +D +L L+KE+E I + + +I G
Sbjct: 249 QGKLEPGVLIYNTIIDGLCKYKHMDDAL--NLFKEMETKGIRPNVVTYSSLISCLCNYGR 306
Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
S A R L ++P T++A+I A G+ +EAE +++E+ + + P Y++
Sbjct: 307 WSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSS 366
Query: 341 LLKGYVKMGYLKDA----EFVVS-------------------------------EMERSG 365
L+ G+ L +A EF+VS EM + G
Sbjct: 367 LINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRG 426
Query: 366 VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF 425
++ + TY++LI AG + A+ + KEM PN Y+ +L G G+ ++
Sbjct: 427 LVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAM 486
Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
V + ++ S +EP + YN+MI+ K + F + +G++PD + +NT+I
Sbjct: 487 VVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGF 546
Query: 486 FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNV 545
+ G + A+ LF+EM+E G P + YN +I E L+ MR+ G +
Sbjct: 547 CRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDA 606
Query: 546 VTYTTLVDIYGQSGRFDDA 564
T + ++ GR D +
Sbjct: 607 STIGLVTNML-HDGRLDKS 624
Score = 145 bits (367), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 164/343 (47%), Gaps = 11/343 (3%)
Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
+A A+F E+ +S P ++ LL KM + +M+ G+ + +TYS+LI
Sbjct: 64 DAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILI 123
Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
+ + + A VL +M +PN S +L GY ++ +M +G +
Sbjct: 124 NCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQ 183
Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
P+T +N +I +N AMA DRM+++G +PD +T+ +++ K G D A L
Sbjct: 184 PNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNL 243
Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
+M++ P YN +I+ L + + +D L M +G+ PNVVTY++L+
Sbjct: 244 LNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCN 303
Query: 558 SGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM 617
GR+ DA L + ++ +N P ++LI+AF ++ + EA + M
Sbjct: 304 YGRWSDASRLLSDMIERKIN-----------PDVFTFSALIDAFVKEGKLVEAEKLYDEM 352
Query: 618 KENGLKPDVVTYTTLMKALIRVDKFHKVPAVYEEMILSGCTPD 660
+ + P +VTY++L+ D+ + ++E M+ C PD
Sbjct: 353 VKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 395
Score = 143 bits (360), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 171/355 (48%), Gaps = 11/355 (3%)
Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
P ++ +++A++ + ++ E+++ G+ Y+ L+ + + L A V
Sbjct: 79 PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAV 138
Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
+ +M + G P+ T S L++ Y ++ R A ++ +M V+ +PN+ ++ ++ G
Sbjct: 139 LGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFL 198
Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTIT 477
+ ++ M + G +PD Y V+++ K A ++M +EP +
Sbjct: 199 HNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLI 258
Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
+NT+ID K D A LF+EM+ +G P TY+ +I+ L RW D RLL +M
Sbjct: 259 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI 318
Query: 538 AQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSL 597
+ + P+V T++ L+D + + G+ +A E L D+ V + PS + +SL
Sbjct: 319 ERKINPDVFTFSALIDAFVKEGKLVEA----EKLYDEMVKR-------SIDPSIVTYSSL 367
Query: 598 INAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVPAVYEEM 652
IN F R EA + ++M PDVVTY TL+K + + + V+ EM
Sbjct: 368 INGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREM 422
Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 145/309 (46%), Gaps = 11/309 (3%)
Query: 351 LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSR 410
L DA + EM +S P +S L+ A A +++ + ++M+ N + YS
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 411 ILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG 470
++ + R + VL +M G EP+ + +++ + + A+A D+M G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 471 IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVK 530
+P+T+T+NTLI F + A L + M +G P TY +++N L ++ +
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 531 RLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPS 590
LL M L P V+ Y T++D + DDA+ N F+ M T G++P+
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDAL-----------NLFKEMETKGIRPN 290
Query: 591 NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVPAVYE 650
+ +SLI+ R ++A +L M E + PDV T++ L+ A ++ K + +Y+
Sbjct: 291 VVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYD 350
Query: 651 EMILSGCTP 659
EM+ P
Sbjct: 351 EMVKRSIDP 359
Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 87/171 (50%), Gaps = 11/171 (6%)
Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
+ D A LF EM + FP ++ +++ + + +++ V L M+ G+ N TY+
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 550 TLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
L++ + + + A+ L ++M+ G +P+ + L+SL+N + +R +E
Sbjct: 121 ILINCFCRRSQLPLALAVLG----------KMMKL-GYEPNIVTLSSLLNGYCHSKRISE 169
Query: 610 AFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVPAVYEEMILSGCTPD 660
A A++ M G +P+ VT+ TL+ L +K + A+ + M+ GC PD
Sbjct: 170 AVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPD 220
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 193 bits (490), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 137/513 (26%), Positives = 244/513 (47%), Gaps = 21/513 (4%)
Query: 130 HSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELL-YSILIHALGRSEKLYEAFLLSQR 188
+++L N S + LA AV+ + K L Y +++ S L++ +++ EA L +
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMK--LGYEPDIVTLSSLLNGYCHGKRISEAVALVDQ 175
Query: 189 QRL-----TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
+ +T+N LI ++ +A+ L+ +M G D Y V+ L +
Sbjct: 176 MFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGD 235
Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
ID +L L K++E KIE D + +I + + A+ G+ P TY
Sbjct: 236 IDLAL--SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 293
Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
++I L N GR +A + ++ E + P ++AL+ +VK G L +AE + EM +
Sbjct: 294 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 353
Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
+ PD TYS LI+ + R + A+ + + M PN Y+ ++ G+ +
Sbjct: 354 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEE 413
Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
++ +EM G+ +T YN +I + A F +M+S+G+ PD IT++ L+D
Sbjct: 414 GMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLD 473
Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
K G+ ++A +FE +Q+ P TYNIMI + + + ED L ++ +G+ P
Sbjct: 474 GLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 533
Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
NV+ YTT++ + C +GL ++A FR M+ DG P++ N+LI A
Sbjct: 534 NVIIYTTMISGF-----------CRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLR 582
Query: 604 DQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
D A + +++ M+ G D T + ++ L
Sbjct: 583 DGDKAASAELIKEMRSCGFVGDASTISMVINML 615
Score = 173 bits (438), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 116/468 (24%), Positives = 212/468 (45%), Gaps = 26/468 (5%)
Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
+YN LI+ R L AL ++ KM + GY D + S ++ +I ++ L
Sbjct: 117 SYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAV--ALVD 174
Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
++ + + + N +I G AS+A+ + G P TY V+ L G
Sbjct: 175 QMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRG 234
Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
A ++ +++++ ++ Y ++ + DA + +EM+ G+ P+ TY+
Sbjct: 235 DIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 294
Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
LI N GRW A +L +M PN +S ++ + G+ ++ EM
Sbjct: 295 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 354
Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
++PD Y+ +I+ F ++ L A F+ M+S+ P+ +T+NTLI K R +
Sbjct: 355 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEG 414
Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
ELF EM +RG T TYN +I L + + +++ M + G+ P+++TY+ L+D
Sbjct: 415 MELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDG 474
Query: 555 YGQSGRFDDAI------------------------ECLEGLSDQAVNAFRVMRTDGLKPS 590
+ G+ + A+ C G + + F + G+KP+
Sbjct: 475 LCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN 534
Query: 591 NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
+ ++I+ F EA A+ + MKE+G P+ TY TL++A +R
Sbjct: 535 VIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLR 582
Score = 169 bits (427), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 115/467 (24%), Positives = 219/467 (46%), Gaps = 17/467 (3%)
Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL--LQKLY 253
+N L+SA A+ + + ++L +M+ D +Y+++I R +++ +L L K+
Sbjct: 83 FNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMM 142
Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
K E D L+ ++ G+ S+A+ + + P T T+ +I L
Sbjct: 143 KL----GYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLH 198
Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
+ EA A+ + + G +P Y ++ G K G + A ++ +ME+ + D Y
Sbjct: 199 NKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIY 258
Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
+ +IDA N A + EM+ +PN Y+ ++ + G W ++L +M
Sbjct: 259 TTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE 318
Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
+ P+ ++ +ID F K L A +D M+ I+PD T+++LI+ R D
Sbjct: 319 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 378
Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
A+ +FE M + FP TYN +I + +R E+ L M +GL+ N VTY TL+
Sbjct: 379 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQ 438
Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
Q+G +C D A F+ M +DG+ P + + L++ + + +A V
Sbjct: 439 GLFQAG------DC-----DMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVV 487
Query: 614 LQYMKENGLKPDVVTYTTLMKALIRVDKFHKVPAVYEEMILSGCTPD 660
+Y++++ ++PD+ TY +++ + + K ++ + L G P+
Sbjct: 488 FEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN 534
Score = 162 bits (411), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 112/452 (24%), Positives = 204/452 (45%), Gaps = 13/452 (2%)
Query: 209 LEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLL 268
L+ A++L +M Q + ++ ++ ++ + NK D L+ L + ++ +I D
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFD--LVISLGERMQNLRISYDLYSY 118
Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
N +I F + A+ LG +G P T ++++ + R EA A+ +++
Sbjct: 119 NILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFV 178
Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
+P T +N L+ G +A ++ M G PD TY +++ G +
Sbjct: 179 MEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL 238
Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
A +LK+ME + + IY+ I+ + + EM + G+ P+ YN +I
Sbjct: 239 ALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 298
Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
Y A M+ I P+ +T++ LID K G+ AE+L++EM +R P
Sbjct: 299 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 358
Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
TY+ +IN +R ++ K + M ++ PNVVTY TL+ + ++ R ++ +E
Sbjct: 359 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGME-- 416
Query: 569 EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
FR M GL + + N+LI + A + + M +G+ PD++T
Sbjct: 417 ---------LFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIIT 467
Query: 629 YTTLMKALIRVDKFHKVPAVYEEMILSGCTPD 660
Y+ L+ L + K K V+E + S PD
Sbjct: 468 YSILLDGLCKYGKLEKALVVFEYLQKSKMEPD 499
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 191 bits (484), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 142/535 (26%), Positives = 243/535 (45%), Gaps = 31/535 (5%)
Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLTPLTYN-----ALISACARNDDLEKALNLMSKMR 220
+S L A+ ++++ L ++ L + +N +I+ R L A + M K+
Sbjct: 91 FSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKII 150
Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
+ GY + I +S +I L ++ S L+ + + +E + D +N ++ G +G
Sbjct: 151 KLGYEPNTITFSTLINGLCLEGRV-SEALELVDRMVEMGH-KPDLITINTLVNGLCLSGK 208
Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
++AM + G P TY V+ + SG+T A + +++E +K Y+
Sbjct: 209 EAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSI 268
Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
++ G K G L +A + +EME G+ + TY++LI + NAGRW+ +L++M
Sbjct: 269 IIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRK 328
Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
PN +S ++ + G+ + ++ KEM G+ PDT Y +ID F K N L A
Sbjct: 329 INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKAN 388
Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
D M+S+G +P+ T+N LI+ + K R D ELF +M RG T TYN +I
Sbjct: 389 QMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGF 448
Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS-------- 572
E + K L M ++ + PN+VTY L+D +G + A+E E +
Sbjct: 449 CELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDI 508
Query: 573 ----------------DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQY 616
D A + F + G+KP N +I + +EA + +
Sbjct: 509 GIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRK 568
Query: 617 MKENGLKPDVVTYTTLMKALIRVDKFHKVPAVYEEMILSGCTPDRKARAMLRSAL 671
M+E+G PD TY L++A + K + EE+ G + D M+ L
Sbjct: 569 MEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML 623
Score = 126 bits (317), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 97/407 (23%), Positives = 182/407 (44%), Gaps = 8/407 (1%)
Query: 121 YRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLY 180
Y P + + + N+ + LA ++ +++ N+ + YSI+I L + L
Sbjct: 222 YGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLD-AVKYSIIIDGLCKHGSLD 280
Query: 181 EAFLLSQRQRLTPLT-----YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVI 235
AF L + +T YN LI + L+ M + + + + +S++I
Sbjct: 281 NAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLI 340
Query: 236 QSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVG 295
S + K+ + ++L+KE+ I D +I GF K KA + + + G
Sbjct: 341 DSFVKEGKLREA--EELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKG 398
Query: 296 LSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAE 355
P T+ +I + R + +F ++ G+ T YN L++G+ ++G L A+
Sbjct: 399 CDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAK 458
Query: 356 FVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGY 415
+ EM V P+ TY +L+D + G E A + +++E S + + IY+ I+ G
Sbjct: 459 ELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGM 518
Query: 416 RDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDT 475
+ + + + + GV+P YN+MI K L A F +M +G PD
Sbjct: 519 CNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDG 578
Query: 476 ITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGE 522
T+N LI H G ++ +L EE++ G+ +T ++I++L +
Sbjct: 579 WTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSD 625
Score = 119 bits (299), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 88/388 (22%), Positives = 172/388 (44%), Gaps = 26/388 (6%)
Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
P ++ + +A++ + + A+ ++++ G+ + ++ + + L A
Sbjct: 86 PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSA 145
Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRW-ESARIVLKEMEVSHAKPNSFIYSRILAGYR 416
+ ++ + G P+ T+S LI+ GR E+ +V + +E+ H KP+ + ++ G
Sbjct: 146 MGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH-KPDLITINTLVNGLC 204
Query: 417 DRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTI 476
G+ ++ +M G +P+ Y +++ K AM +M I+ D +
Sbjct: 205 LSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAV 264
Query: 477 TWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM 536
++ +ID K G D A LF EM+ +G TYNI+I RW+D +LL +M
Sbjct: 265 KYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDM 324
Query: 537 RAQGLLPNVVTYTTLVDIYGQSGRFDDAIE------------------------CLEGLS 572
+ + PNVVT++ L+D + + G+ +A E C E
Sbjct: 325 IKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHL 384
Query: 573 DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
D+A +M + G P+ N LIN + + R + + + M G+ D VTY TL
Sbjct: 385 DKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTL 444
Query: 633 MKALIRVDKFHKVPAVYEEMILSGCTPD 660
++ + K + +++EM+ P+
Sbjct: 445 IQGFCELGKLNVAKELFQEMVSRKVPPN 472
Score = 110 bits (276), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 142/315 (45%), Gaps = 29/315 (9%)
Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
E S L+D A + A + ++M S P +SR+ + ++ + K
Sbjct: 58 ERLRSGLVDIKA-----DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCK 112
Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
+M+ G+ + + ++MI+ F + L A +A +++ G EP+TIT++TLI+ G
Sbjct: 113 QMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEG 172
Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
R A EL + M E G+ P T N ++N L + + L+ M G PN VTY
Sbjct: 173 RVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYG 232
Query: 550 TLVDIYGQSGRFDDAIE------------------------CLEGLSDQAVNAFRVMRTD 585
++++ +SG+ A+E C G D A N F M
Sbjct: 233 PVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMK 292
Query: 586 GLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
G+ + + N LI F R + +L+ M + + P+VVT++ L+ + ++ K +
Sbjct: 293 GITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREA 352
Query: 646 PAVYEEMILSGCTPD 660
+++EMI G PD
Sbjct: 353 EELHKEMIHRGIAPD 367
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 191 bits (484), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 144/552 (26%), Positives = 257/552 (46%), Gaps = 28/552 (5%)
Query: 103 LASSPSSLNRVEFKLAESYRAVPAPLWH-----SLLKNLCSSNSSIDLAYAVVSWLQKHN 157
L S+ + +N+ E ++ + + H S+ N S + LA AV++ + K
Sbjct: 89 LLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMK-- 146
Query: 158 LCYSYELL-YSILIHALGRSEKLYEAFLLSQRQ-----RLTPLTYNALISACARNDDLEK 211
L Y +++ S L++ S+++ +A L + + T+ LI ++ +
Sbjct: 147 LGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASE 206
Query: 212 ALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDV 271
A+ L+ +M Q G D + Y V+ L + ID +L L K++E KIE D + N +
Sbjct: 207 AVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL--SLLKKMEKGKIEADVVIYNTI 264
Query: 272 IVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGL 331
I G K A+ G+ P TY+++I+ L N GR +A + ++ E +
Sbjct: 265 IDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKI 324
Query: 332 KPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARI 391
P ++AL+ +VK G L +AE + EM + + PD TYS LI+ + R + A+
Sbjct: 325 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 384
Query: 392 VLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFG 451
+ + M PN YS ++ G+ + ++ +EM G+ +T Y +I F
Sbjct: 385 MFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFF 444
Query: 452 KYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTT 511
+ +A F +M+S G+ P+ +T+N L+D K G+ +A +FE +Q P
Sbjct: 445 QARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIY 504
Query: 512 TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGL 571
TYNIMI + + + ED L N+ +G+ PNV+ Y T++ + C +G
Sbjct: 505 TYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGF-----------CRKGS 553
Query: 572 SDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTT 631
++A + + M+ DG P++ N+LI A D + +++ M+ G D T
Sbjct: 554 KEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGL 613
Query: 632 LMKALI--RVDK 641
+ L R+DK
Sbjct: 614 VTNMLHDGRLDK 625
Score = 183 bits (464), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 122/467 (26%), Positives = 226/467 (48%), Gaps = 17/467 (3%)
Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL--LQKLY 253
+N L+SA A+ + E ++L +M+ G D YS+ I R +++ +L L K+
Sbjct: 86 FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMM 145
Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
K E D L+ ++ G+ + S A+ + +G P T T+ +I L
Sbjct: 146 KL----GYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLH 201
Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
+ EA A+ +++ + G +P Y ++ G K G + A ++ +ME+ + D Y
Sbjct: 202 NKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIY 261
Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
+ +ID + A + EM+ +P+ F YS +++ + G W ++L +M
Sbjct: 262 NTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIE 321
Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
+ P+ ++ +ID F K L A +D M+ I+PD T+++LI+ R D
Sbjct: 322 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 381
Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
A+ +FE M + FP TY+ +I + +R E+ L M +GL+ N VTYTTL
Sbjct: 382 AKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTL-- 439
Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
I+G F A +C D A F+ M + G+ P+ L N L++ ++ + A+A V
Sbjct: 440 IHG----FFQARDC-----DNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVV 490
Query: 614 LQYMKENGLKPDVVTYTTLMKALIRVDKFHKVPAVYEEMILSGCTPD 660
+Y++ + ++PD+ TY +++ + + K ++ + L G +P+
Sbjct: 491 FEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPN 537
Score = 134 bits (336), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 103/413 (24%), Positives = 176/413 (42%), Gaps = 65/413 (15%)
Query: 310 LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS---EMERSGV 366
LS+ + +A +F ++ +S P +N LL KM E V+S +M+ G+
Sbjct: 58 LSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKF---ELVISLGEQMQTLGI 114
Query: 367 LPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQ 426
D +TYS+ I+ + + A VL +M +P+ S +L GY
Sbjct: 115 SHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVA 174
Query: 427 VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTIT--------- 477
++ +M G +PDT + +I +N A+A D+M+ G +PD +T
Sbjct: 175 LVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLC 234
Query: 478 --------------------------WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTT 511
+NT+ID K D A LF EM +G P
Sbjct: 235 KRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVF 294
Query: 512 TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGR-------FDDA 564
TY+ +I+ L RW D RLL +M + + PNVVT++ L+D + + G+ +D+
Sbjct: 295 TYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 354
Query: 565 IE-----------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRD 607
I+ C+ D+A + F +M + P+ + ++LI F + +R
Sbjct: 355 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRV 414
Query: 608 AEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVPAVYEEMILSGCTPD 660
E + + M + GL + VTYTTL+ + V+++M+ G P+
Sbjct: 415 EEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPN 467
Score = 63.2 bits (152), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 85/184 (46%), Gaps = 27/184 (14%)
Query: 503 ERGYFPCTTTYN-IMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
ER + + Y I+ N L + + +D L G+M P++V + L+ + +F
Sbjct: 40 ERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKF 99
Query: 562 DDAIECLE-----GLSDQA------VNAF--------------RVMRTDGLKPSNLALNS 596
+ I E G+S +N F ++M+ G +P + L+S
Sbjct: 100 ELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKL-GYEPDIVTLSS 158
Query: 597 LINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVPAVYEEMILSG 656
L+N + +R ++A A++ M E G KPD T+TTL+ L +K + A+ ++M+ G
Sbjct: 159 LLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG 218
Query: 657 CTPD 660
C PD
Sbjct: 219 CQPD 222
>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
Length = 871
Score = 190 bits (483), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 147/549 (26%), Positives = 255/549 (46%), Gaps = 24/549 (4%)
Query: 132 LLKNLCSSN----SSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA---FL 184
+L N+C + +D+A+ ++ + L E+ Y+ +I L ++ +L EA F
Sbjct: 239 VLYNVCIDSFGKVGKVDMAWKFFHEIEANGL-KPDEVTYTSMIGVLCKANRLDEAVEMFE 297
Query: 185 LSQRQRLTPLTY--NALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN 242
++ R P TY N +I ++A +L+ + R G I Y+ ++ L +
Sbjct: 298 HLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMG 357
Query: 243 KIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
K+D +L K+++E++ D + N +I +AG A Q GL P T
Sbjct: 358 KVDEAL--KVFEEMKKDAAP-NLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRT 414
Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
++ L S + EA A+FEE+ P + +L+ G K+G + DA V +M
Sbjct: 415 VNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKML 474
Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
S + Y+ LI + N GR E + K+M + P+ + + + GE +
Sbjct: 475 DSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPE 534
Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
+ + +E+K+ PD Y+++I K + F M +G DT +N +I
Sbjct: 535 KGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVI 594
Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
D KCG+ ++A +L EEM+ +G+ P TY +I+ L + +R ++ L +++ +
Sbjct: 595 DGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIE 654
Query: 543 PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
NVV Y++L+D +G+ GR D+A LE L + GL P+ NSL++A
Sbjct: 655 LNVVIYSSLIDGFGKVGRIDEAYLILEELMQK-----------GLTPNLYTWNSLLDALV 703
Query: 603 EDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVPAVYEEMILSGCTPDRK 662
+ + EA Q MKE P+ VTY L+ L +V KF+K ++EM G P
Sbjct: 704 KAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTI 763
Query: 663 ARAMLRSAL 671
+ + S L
Sbjct: 764 SYTTMISGL 772
Score = 169 bits (427), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 126/552 (22%), Positives = 253/552 (45%), Gaps = 34/552 (6%)
Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
+ S++ LC +N +D A + L+K N Y+ +I G + K EA+ L +R
Sbjct: 276 YTSMIGVLCKANR-LDEAVEMFEHLEK-NRRVPCTYAYNTMIMGYGSAGKFDEAYSLLER 333
Query: 189 QRL-----TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
QR + + YN +++ + +++AL + +M++D + Y+++I L R K
Sbjct: 334 QRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAP-NLSTYNILIDMLCRAGK 392
Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
+D++ +L ++ + + + +N ++ K+ +A +P T+
Sbjct: 393 LDTAF--ELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITF 450
Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
++I L GR +A V+E++ +S + + Y +L+K + G +D + +M
Sbjct: 451 CSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMIN 510
Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
PD + +D AG E R + +E++ P++ YS ++ G G
Sbjct: 511 QNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANE 570
Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
T+++ MK G DT YN++ID F K ++ A + M ++G EP +T+ ++ID
Sbjct: 571 TYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVID 630
Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
K R D A LFEE + + Y+ +I+ G+ R ++ +L + +GL P
Sbjct: 631 GLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTP 690
Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSD------------------------QAVNAF 579
N+ T+ +L+D ++ ++A+ C + + + +A +
Sbjct: 691 NLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFW 750
Query: 580 RVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRV 639
+ M+ G+KPS ++ ++I+ + AEA A+ K NG PD Y +++ L
Sbjct: 751 QEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNG 810
Query: 640 DKFHKVPAVYEE 651
++ +++EE
Sbjct: 811 NRAMDAFSLFEE 822
Score = 152 bits (383), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/391 (24%), Positives = 183/391 (46%), Gaps = 12/391 (3%)
Query: 270 DVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES 329
++++G KA + + M + P + Y +I A S + +F++++E
Sbjct: 138 EMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQEL 197
Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
G +P + L++G+ K G + A ++ EM+ S + D Y++ ID++ G+ + A
Sbjct: 198 GYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMA 257
Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
E+E + KP+ Y+ ++ ++ + ++ + P T+ YN MI
Sbjct: 258 WKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMG 317
Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
+G A + +R ++G P I +N ++ C K G+ D A ++FEEM++ P
Sbjct: 318 YGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAA-PN 376
Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
+TYNI+I++L + + L +M+ GL PNV T +VD +S + D+A E
Sbjct: 377 LSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFE 436
Query: 570 GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
+ + P + SLI+ G+ R +A+ V + M ++ + + + Y
Sbjct: 437 EMDYKVCT-----------PDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVY 485
Query: 630 TTLMKALIRVDKFHKVPAVYEEMILSGCTPD 660
T+L+K + +Y++MI C+PD
Sbjct: 486 TSLIKNFFNHGRKEDGHKIYKDMINQNCSPD 516
Score = 152 bits (383), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 161/341 (47%), Gaps = 12/341 (3%)
Query: 320 EAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDA 379
+ + E+ +G P ++ G VK L++ VV M + P Y+ LI A
Sbjct: 118 DQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGA 177
Query: 380 YANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPD 439
++ + + ++M+ +P +++ ++ G+ G +L EMKSS ++ D
Sbjct: 178 FSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDAD 237
Query: 440 THFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFE 499
YNV ID+FGK + A F + + G++PD +T+ ++I K R D A E+FE
Sbjct: 238 IVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFE 297
Query: 500 EMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSG 559
+++ PCT YN MI G ++++ LL RA+G +P+V+ Y ++ + G
Sbjct: 298 HLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMG 357
Query: 560 RFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKE 619
+ D+A++ E + A P+ N LI+ + AF + M++
Sbjct: 358 KVDEALKVFEEMKKDAA------------PNLSTYNILIDMLCRAGKLDTAFELRDSMQK 405
Query: 620 NGLKPDVVTYTTLMKALIRVDKFHKVPAVYEEMILSGCTPD 660
GL P+V T ++ L + K + A++EEM CTPD
Sbjct: 406 AGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPD 446
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/463 (24%), Positives = 211/463 (45%), Gaps = 12/463 (2%)
Query: 115 FKLAESYRAVPAP---LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIH 171
K+ E + AP ++ L+ LC + +D A+ + +QK L + +I++
Sbjct: 363 LKVFEEMKKDAAPNLSTYNILIDMLCRA-GKLDTAFELRDSMQKAGL-FPNVRTVNIMVD 420
Query: 172 ALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHC 226
L +S+KL EA + + + TP +T+ +LI + ++ A + KM
Sbjct: 421 RLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRT 480
Query: 227 DFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMR 286
+ I Y+ +I++ + + K+YK++ D QLLN + KAG+ K
Sbjct: 481 NSIVYTSLIKNFFNHGRKEDG--HKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRA 538
Query: 287 FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYV 346
+ P +Y+ +I L +G E +F +KE G T+AYN ++ G+
Sbjct: 539 MFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFC 598
Query: 347 KMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSF 406
K G + A ++ EM+ G P TY +ID A R + A ++ +E + + N
Sbjct: 599 KCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVV 658
Query: 407 IYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
IYS ++ G+ G + +L+E+ G+ P+ + +N ++D K ++ A+ F M
Sbjct: 659 IYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSM 718
Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERW 526
P+ +T+ LI+ K ++++A ++EMQ++G P T +Y MI+ L +
Sbjct: 719 KELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNI 778
Query: 527 EDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
+ L +A G +P+ Y +++ R DA E
Sbjct: 779 AEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFE 821
Score = 133 bits (334), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 101/403 (25%), Positives = 183/403 (45%), Gaps = 8/403 (1%)
Query: 143 IDLAYAVVSWLQKHNLCYSYELLYSILIHAL---GRSEKLYEAFLLSQRQRLTP--LTYN 197
+D AY V + + C + ++Y+ LI GR E ++ + Q +P N
Sbjct: 463 VDDAYKVYEKMLDSD-CRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLN 521
Query: 198 ALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIE 257
+ + + EK + +++ + D +YS++I L + + + +L+ ++
Sbjct: 522 TYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETY--ELFYSMK 579
Query: 258 CDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTI 317
LD + N VI GF K G +KA + L + G P TY +VI L+ R
Sbjct: 580 EQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLD 639
Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
EA +FEE K ++ Y++L+ G+ K+G + +A ++ E+ + G+ P+ +T++ L+
Sbjct: 640 EAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLL 699
Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
DA A A + + M+ PN Y ++ G ++ + F +EM+ G++
Sbjct: 700 DALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMK 759
Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
P T Y MI K + A A FDR + G PD+ +N +I+ R A L
Sbjct: 760 PSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSL 819
Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
FEE + RG T ++++ L + + E + +R G
Sbjct: 820 FEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAAIVGAVLRETG 862
Score = 79.3 bits (194), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 99/252 (39%), Gaps = 11/252 (4%)
Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
Q+L EM +G P + M+ K N L M P + TLI
Sbjct: 119 QILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAF 178
Query: 486 FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNV 545
D LF++MQE GY P + +I ++ R + LL M++ L ++
Sbjct: 179 SAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADI 238
Query: 546 VTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQ 605
V Y +D +G+ G+ D A F + +GLKP + S+I +
Sbjct: 239 VLYNVCIDSFGKVGKVD-----------MAWKFFHEIEANGLKPDEVTYTSMIGVLCKAN 287
Query: 606 RDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVPAVYEEMILSGCTPDRKARA 665
R EA + +++++N P Y T++ KF + ++ E G P A
Sbjct: 288 RLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYN 347
Query: 666 MLRSALRYMKQT 677
+ + LR M +
Sbjct: 348 CILTCLRKMGKV 359
>sp|Q940A6|PP325_ARATH Pentatricopeptide repeat-containing protein At4g19440,
chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2
SV=2
Length = 838
Score = 189 bits (481), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 128/478 (26%), Positives = 223/478 (46%), Gaps = 18/478 (3%)
Query: 166 YSILIHALGRSEKLYEAFLLSQ---RQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
YSIL+ L R++++ +A+ + + ++ P + YN LI + L KA+ + M
Sbjct: 346 YSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMV 405
Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
G Y+ +I+ + + D++ ++L KE+ ++ VI
Sbjct: 406 SKGLSLTSSTYNTLIKGYCKNGQADNA--ERLLKEMLSIGFNVNQGSFTSVICLLCSHLM 463
Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
A+RF+G +SP +I+ L G+ +A ++ + G T+ NA
Sbjct: 464 FDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNA 523
Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
LL G + G L +A + E+ G + D +Y+ LI + + A + L EM
Sbjct: 524 LLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRG 583
Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
KP+++ YS ++ G + + + Q + K +G+ PD + Y+VMID K
Sbjct: 584 LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQ 643
Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
FD M+S+ ++P+T+ +N LI + + GR A EL E+M+ +G P + TY +I +
Sbjct: 644 EFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGM 703
Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
R E+ K L MR +GL PNV YT L+D YG+ G+ +ECL R
Sbjct: 704 SIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVK-VECL----------LR 752
Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
M + + P+ + +I + D EA +L M+E G+ PD +TY + ++
Sbjct: 753 EMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLK 810
Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 121/482 (25%), Positives = 212/482 (43%), Gaps = 43/482 (8%)
Query: 125 PAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA-- 182
P + +S+L + I AY V+ + K + ++Y+ LI + + L +A
Sbjct: 341 PTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNV-IVYNNLIDSFIEAGSLNKAIE 399
Query: 183 ---FLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT 239
++S+ LT TYN LI +N + A L+ +M G++ + +++ VI L
Sbjct: 400 IKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLC 459
Query: 240 RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAM----RFL------- 288
DS+L + E+ + G LL +I G K G SKA+ +FL
Sbjct: 460 SHLMFDSAL--RFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVD 517
Query: 289 ---------GMAQ---------------GVGLSPKTATYAAVITALSNSGRTIEAEAVFE 324
G+ + G G +Y +I+ + EA +
Sbjct: 518 TRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLD 577
Query: 325 ELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAG 384
E+ + GLKP Y+ L+ G M +++A + +R+G+LPD +TYS++ID A
Sbjct: 578 EMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAE 637
Query: 385 RWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYN 444
R E + EM + +PN+ +Y+ ++ Y G ++ ++MK G+ P++ Y
Sbjct: 638 RTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYT 697
Query: 445 VMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQER 504
+I + + A F+ M EG+EP+ + LID + K G+ + E L EM +
Sbjct: 698 SLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSK 757
Query: 505 GYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA 564
P TY +MI + RLL MR +G++P+ +TY + Y + G +A
Sbjct: 758 NVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 817
Query: 565 IE 566
+
Sbjct: 818 FK 819
Score = 148 bits (373), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 119/466 (25%), Positives = 205/466 (43%), Gaps = 34/466 (7%)
Query: 205 RNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK--EIECDKIE 262
+ D AL++ + G ++++ SL R N+ QK + ++ C +
Sbjct: 216 KRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANE-----FQKCCEAFDVVCKGVS 270
Query: 263 LDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAV 322
D L I F K G +A++ + G++P T+ VI L GR EA
Sbjct: 271 PDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMF 330
Query: 323 FEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYAN 382
E++ E G++P Y+ L+KG + + DA FV+ EM + G P+ Y+ LID++
Sbjct: 331 KEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIE 390
Query: 383 AGRWESARIVLKEMEVSHA-KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTH 441
AG A I +K++ VS S Y+ ++ GY G+ ++LKEM S G
Sbjct: 391 AGSLNKA-IEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIG------ 443
Query: 442 FYNVMIDTFGKYNCLHHAMAAFD-------RMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
+NV +F CL + FD ML + P TLI K G++ +A
Sbjct: 444 -FNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKA 502
Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
EL+ + +G+ T T N +++ L E + ++ R+ + +G + + V+Y TL+
Sbjct: 503 LELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISG 562
Query: 555 YGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
+ D+A L+ + + GLKP N + LI + EA
Sbjct: 563 CCGKKKLDEAFMFLDEMVKR-----------GLKPDNYTYSILICGLFNMNKVEEAIQFW 611
Query: 615 QYMKENGLKPDVVTYTTLMKALIRVDKFHKVPAVYEEMILSGCTPD 660
K NG+ PDV TY+ ++ + ++ + ++EM+ P+
Sbjct: 612 DDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPN 657
Score = 146 bits (368), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 124/510 (24%), Positives = 218/510 (42%), Gaps = 34/510 (6%)
Query: 165 LYSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISA---CARNDDLEKALNLM 216
L++ I+A + K+ EA L + + P +T+N +I C R D+ A
Sbjct: 275 LFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE---AFMFK 331
Query: 217 SKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFA 276
KM + G I YS++++ LTR +I + + KE+ + + N++I F
Sbjct: 332 EKMVERGMEPTLITYSILVKGLTRAKRIGDAYF--VLKEMTKKGFPPNVIVYNNLIDSFI 389
Query: 277 KAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTK 336
+AG +KA+ + GLS ++TY +I +G+ AE + +E+ G
Sbjct: 390 EAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQG 449
Query: 337 AYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA-----RI 391
++ +++ A V EM + P + LI G+ A +
Sbjct: 450 SFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQF 509
Query: 392 VLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFG 451
+ K V N+ +L G + G+ F++ KE+ G D YN +I
Sbjct: 510 LNKGFVVDTRTSNA-----LLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCC 564
Query: 452 KYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTT 511
L A D M+ G++PD T++ LI F + + A + +++ + G P
Sbjct: 565 GKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVY 624
Query: 512 TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGL 571
TY++MI+ + ER E+ + M ++ + PN V Y L+ Y +SGR A+E E
Sbjct: 625 TYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRED- 683
Query: 572 SDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTT 631
M+ G+ P++ SLI R EA + + M+ GL+P+V YT
Sbjct: 684 ----------MKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTA 733
Query: 632 LMKALIRVDKFHKVPAVYEEMILSGCTPDR 661
L+ ++ + KV + EM P++
Sbjct: 734 LIDGYGKLGQMVKVECLLREMHSKNVHPNK 763
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 113/500 (22%), Positives = 211/500 (42%), Gaps = 18/500 (3%)
Query: 166 YSILIHALGRSEKLYEAFLLSQRQ-----RLTPLTYNALISACARNDDLEKALNLMSKMR 220
++ +I LG + EAF+ ++ T +TY+ L+ R + A ++ +M
Sbjct: 311 FNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMT 370
Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
+ G+ + I Y+ +I S ++ ++ ++ + + L N +I G+ K G
Sbjct: 371 KKGFPPNVIVYNNLIDSFIEAGSLNKAI--EIKDLMVSKGLSLTSSTYNTLIKGYCKNGQ 428
Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
A A R L +G + ++ +VI L + A E+ + P
Sbjct: 429 ADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTT 488
Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
L+ G K G A + + G + D T + L+ AG+ + A + KE+
Sbjct: 489 LISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRG 548
Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
+ Y+ +++G + + F L EM G++PD + Y+++I N + A+
Sbjct: 549 CVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAI 608
Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
+D G+ PD T++ +ID K R + +E F+EM + P T YN +I
Sbjct: 609 QFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAY 668
Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
R L +M+ +G+ PN TYT+L+ R + +A F
Sbjct: 669 CRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVE-----------EAKLLFE 717
Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVD 640
MR +GL+P+ +LI+ +G+ + + +L+ M + P+ +TYT ++ R
Sbjct: 718 EMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDG 777
Query: 641 KFHKVPAVYEEMILSGCTPD 660
+ + EM G PD
Sbjct: 778 NVTEASRLLNEMREKGIVPD 797
Score = 129 bits (324), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 102/383 (26%), Positives = 176/383 (45%), Gaps = 12/383 (3%)
Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
G+ P T ++T+L + + F+ + + G+ P + + + K G +++A
Sbjct: 234 GMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAINAFCKGGKVEEA 292
Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
+ S+ME +GV P+ T++ +ID GR++ A + ++M +P YS ++ G
Sbjct: 293 VKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKG 352
Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
+ VLKEM G P+ YN +ID+F + L+ A+ D M+S+G+
Sbjct: 353 LTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLT 412
Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
+ T+NTLI + K G+ D AE L +EM G+ ++ +I LL ++ R +G
Sbjct: 413 SSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVG 472
Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLAL 594
M + + P TTL+ + G+ A+E L Q +N V+ T + SN L
Sbjct: 473 EMLLRNMSPGGGLLTTLISGLCKHGKHSKALE----LWFQFLNKGFVVDT---RTSNALL 525
Query: 595 NSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVPAVYEEMIL 654
+ L A D EAF + + + G D V+Y TL+ K + +EM+
Sbjct: 526 HGLCEAGKLD----EAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 581
Query: 655 SGCTPDRKARAMLRSALRYMKQT 677
G PD ++L L M +
Sbjct: 582 RGLKPDNYTYSILICGLFNMNKV 604
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 64/149 (42%), Gaps = 15/149 (10%)
Query: 528 DVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGL 587
DV +L N +G+ P+ T L+ ++ F E AF V+ G+
Sbjct: 225 DVFPVLAN---KGMFPSKTTCNILLTSLVRANEFQKCCE-----------AFDVV-CKGV 269
Query: 588 KPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVPA 647
P + INAF + + EA + M+E G+ P+VVT+ T++ L ++ +
Sbjct: 270 SPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFM 329
Query: 648 VYEEMILSGCTPDRKARAMLRSALRYMKQ 676
E+M+ G P ++L L K+
Sbjct: 330 FKEKMVERGMEPTLITYSILVKGLTRAKR 358
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 187 bits (475), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 121/479 (25%), Positives = 222/479 (46%), Gaps = 14/479 (2%)
Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
TY+ LI+ R L AL +++KM + GY D + + ++ N+I ++ L
Sbjct: 118 TYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAV--SLVG 175
Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
++ + D N +I G + AS+A+ + G P TY V+ L G
Sbjct: 176 QMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRG 235
Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
A ++ +++++ ++P YN ++ + DA + +EM+ G+ P+ TY+
Sbjct: 236 DIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 295
Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
LI N GRW A +L +M PN +S ++ + G+ ++ EM
Sbjct: 296 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 355
Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
++PD Y+ +I+ F ++ L A F+ M+S+ P+ +T+NTLI K R D
Sbjct: 356 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEG 415
Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
ELF EM +RG T TY +I+ + ++ + + M + G+LP+++TY+ L+D
Sbjct: 416 MELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDG 475
Query: 555 YGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
+G+ + A+ F ++ ++P N +I + + + + +
Sbjct: 476 LCNNGKVETALV-----------VFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLF 524
Query: 615 QYMKENGLKPDVVTYTTLMKALIRVDKFHKVPAVYEEMILSGCTPDRKA-RAMLRSALR 672
+ G+KP+VVTYTT+M R + A++ EM G PD ++R+ LR
Sbjct: 525 CSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLR 583
Score = 184 bits (468), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 133/495 (26%), Positives = 237/495 (47%), Gaps = 21/495 (4%)
Query: 130 HSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELL-YSILIHALGRSEKLYEAF-LLSQ 187
+S+L N S + LA AV++ + K L Y +++ + L++ ++ +A L+ Q
Sbjct: 119 YSILINCFCRRSQLSLALAVLAKMMK--LGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQ 176
Query: 188 RQRLT----PLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
+ T+N LI R++ +A+ L+ +M G D + Y +V+ L +
Sbjct: 177 MVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGD 236
Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
ID +L L K++E KIE + N +I + + A+ G+ P TY
Sbjct: 237 IDLAL--SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 294
Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
++I L N GR +A + ++ E + P ++AL+ +VK G L +AE + EM +
Sbjct: 295 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 354
Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
+ PD TYS LI+ + R + A+ + + M PN Y+ ++ G+
Sbjct: 355 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDE 414
Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
++ +EM G+ +T Y +I F + +A F +M+S+G+ PD +T++ L+D
Sbjct: 415 GMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLD 474
Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
G+ + A +FE +Q P TYNIMI + + + ED L ++ +G+ P
Sbjct: 475 GLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 534
Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
NVVTYTT++ + C +GL ++A FR M+ +G P + N+LI A
Sbjct: 535 NVVTYTTMMSGF-----------CRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLR 583
Query: 604 DQRDAEAFAVLQYMK 618
D A + +++ M+
Sbjct: 584 DGDKAASAELIREMR 598
Score = 169 bits (428), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 180/380 (47%), Gaps = 11/380 (2%)
Query: 292 QGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYL 351
Q +G+S TY+ +I + A AV ++ + G +P N+LL G+ +
Sbjct: 108 QNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRI 167
Query: 352 KDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRI 411
DA +V +M G PD T++ LI R A ++ M V +P+ Y +
Sbjct: 168 SDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIV 227
Query: 412 LAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGI 471
+ G RG+ +LK+M+ +EP YN +ID Y ++ A+ F M ++GI
Sbjct: 228 VNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGI 287
Query: 472 EPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKR 531
P+ +T+N+LI C GR+ A L +M ER P T++ +I+ ++ + + ++
Sbjct: 288 RPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 347
Query: 532 LLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSN 591
L M + + P++ TY++L++ + C+ D+A + F +M + P+
Sbjct: 348 LYDEMIKRSIDPDIFTYSSLINGF-----------CMHDRLDEAKHMFELMISKDCFPNV 396
Query: 592 LALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVPAVYEE 651
+ N+LI F + +R E + + M + GL + VTYTTL+ + + V+++
Sbjct: 397 VTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQ 456
Query: 652 MILSGCTPDRKARAMLRSAL 671
M+ G PD ++L L
Sbjct: 457 MVSDGVLPDIMTYSILLDGL 476
Score = 165 bits (418), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 113/452 (25%), Positives = 205/452 (45%), Gaps = 13/452 (2%)
Query: 209 LEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLL 268
L+ A+NL M + + +S ++ ++ + NK D L+ L ++++ I +
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFD--LVISLGEQMQNLGISHNLYTY 119
Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
+ +I F + S A+ L +G P T +++ + R +A ++ ++ E
Sbjct: 120 SILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVE 179
Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
G +P + +N L+ G + +A +V M G PD TY ++++ G +
Sbjct: 180 MGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDL 239
Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
A +LK+ME +P IY+ I+ + + EM + G+ P+ YN +I
Sbjct: 240 ALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 299
Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
Y A M+ I P+ +T++ LID K G+ AE+L++EM +R P
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 359
Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
TY+ +IN +R ++ K + M ++ PNVVTY TL+ + ++ R D+ +E
Sbjct: 360 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGME-- 417
Query: 569 EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
FR M GL + + +LI+ F + + A V + M +G+ PD++T
Sbjct: 418 ---------LFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMT 468
Query: 629 YTTLMKALIRVDKFHKVPAVYEEMILSGCTPD 660
Y+ L+ L K V+E + S PD
Sbjct: 469 YSILLDGLCNNGKVETALVVFEYLQRSKMEPD 500
Score = 140 bits (352), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 109/451 (24%), Positives = 204/451 (45%), Gaps = 19/451 (4%)
Query: 75 LSLQKQRYDFTPLLNFLSENSNSESASALASSPSSLNRVEFKLAESYRAVPAPLWHSLLK 134
+ Q + F L++ L ++ + A AL ++R+ K + P + + ++
Sbjct: 180 MGYQPDSFTFNTLIHGLFRHNRASEAVAL------VDRMVVKGCQ-----PDLVTYGIVV 228
Query: 135 NLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLL-----SQRQ 189
N IDLA +++ +++ + ++Y+ +I AL + + +A L ++
Sbjct: 229 NGLCKRGDIDLALSLLKKMEQGKI-EPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGI 287
Query: 190 RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLL 249
R +TYN+LI A L+S M + + + + +S +I + + K+ +
Sbjct: 288 RPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA-- 345
Query: 250 QKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITA 309
+KLY E+ I+ D + +I GF +A + P TY +I
Sbjct: 346 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKG 405
Query: 310 LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPD 369
+ R E +F E+ + GL T Y L+ G+ + +A+ V +M GVLPD
Sbjct: 406 FCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPD 465
Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
TYS+L+D N G+ E+A +V + ++ S +P+ + Y+ ++ G G+ + + +
Sbjct: 466 IMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFC 525
Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
+ GV+P+ Y M+ F + A A F M EG PD+ T+NTLI H + G
Sbjct: 526 SLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDG 585
Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
+ EL EM+ + +T ++ N+L
Sbjct: 586 DKAASAELIREMRSCRFVGDASTIGLVTNML 616
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 88/171 (51%), Gaps = 11/171 (6%)
Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
+ D A LF +M + FP ++ +++ + + +++ V L M+ G+ N+ TY+
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 550 TLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
L++ + + + A+ L ++M+ G +P + LNSL+N F R ++
Sbjct: 121 ILINCFCRRSQLSLALAVLA----------KMMKL-GYEPDIVTLNSLLNGFCHGNRISD 169
Query: 610 AFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVPAVYEEMILSGCTPD 660
A +++ M E G +PD T+ TL+ L R ++ + A+ + M++ GC PD
Sbjct: 170 AVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPD 220
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 187 bits (475), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 116/395 (29%), Positives = 185/395 (46%), Gaps = 11/395 (2%)
Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
N VI + G +A L + + G +P +Y+ V+ G + + E +K
Sbjct: 250 NIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKR 309
Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
GLKP + Y +++ ++ L +AE SEM R G+LPD Y+ LID + G +
Sbjct: 310 KGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRA 369
Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
A EM P+ Y+ I++G+ G+ ++ EM G+EPD+ + +I+
Sbjct: 370 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 429
Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
+ K + A + M+ G P+ +T+ TLID K G D A EL EM + G P
Sbjct: 430 GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 489
Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
TYN ++N L + E+ +L+G A GL + VTYTTL+D Y +SG D A E L
Sbjct: 490 NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 549
Query: 569 EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
+ M GL+P+ + N L+N F + +L +M G+ P+ T
Sbjct: 550 -----------KEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATT 598
Query: 629 YTTLMKALIRVDKFHKVPAVYEEMILSGCTPDRKA 663
+ +L+K + A+Y++M G PD K
Sbjct: 599 FNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKT 633
Score = 162 bits (410), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 107/407 (26%), Positives = 188/407 (46%), Gaps = 7/407 (1%)
Query: 165 LYSILIHALGRSEKLYEA---FLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKM 219
+Y +I L R KL EA F RQ + P + Y LI + D+ A +M
Sbjct: 318 IYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEM 377
Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
D + Y+ +I + + + KL+ E+ C +E D ++I G+ KAG
Sbjct: 378 HSRDITPDVLTYTAIISGFCQIGDMVEA--GKLFHEMFCKGLEPDSVTFTELINGYCKAG 435
Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
A R G SP TY +I L G A + E+ + GL+P YN
Sbjct: 436 HMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYN 495
Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
+++ G K G +++A +V E E +G+ D TY+ L+DAY +G + A+ +LKEM
Sbjct: 496 SIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK 555
Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
+P ++ ++ G+ G + ++L M + G+ P+ +N ++ + N L A
Sbjct: 556 GLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAA 615
Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
A + M S G+ PD T+ L+ H K A LF+EM+ +G+ +TY+++I
Sbjct: 616 TAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKG 675
Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE 566
+++++ + + + MR +GL + + D + R D ++
Sbjct: 676 FLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVD 722
Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 126/503 (25%), Positives = 217/503 (43%), Gaps = 70/503 (13%)
Query: 166 YSILIH---ALGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
Y+I+IH LGR ++ + LL + + TP ++Y+ +++ R +L+K L+ M+
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 308
Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
+ G + Y +I L R K+ + ++ + E+ I D + +I GF K GD
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEA--EEAFSEMIRQGILPDTVVYTTLIDGFCKRGD 366
Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
A +F ++P TY A+I+ G +EA +F E+ GL+P + +
Sbjct: 367 IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTE 426
Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
L+ GY K G++KDA V + M ++G P+ TY+ LID G +SA +L EM
Sbjct: 427 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 486
Query: 401 AKPNSFIYSRILAG-----------------------------------YRDRGEWQRTF 425
+PN F Y+ I+ G Y GE +
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 546
Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
++LKEM G++P +NV+++ F + L + ML++GI P+ T+N+L+ +
Sbjct: 547 EILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQY 606
Query: 486 FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNV 545
A ++++M RG P TY ++ + ++ L M+ +G +V
Sbjct: 607 CIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSV 666
Query: 546 VTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQ 605
TY+ L+ + + +F +A E F MR +GL
Sbjct: 667 STYSVLIKGFLKRKKFLEARE-----------VFDQMRREGLAA---------------- 699
Query: 606 RDAEAFAVLQYMKENGLKPDVVT 628
D E F K G +PD +
Sbjct: 700 -DKEIFDFFSDTKYKGKRPDTIV 721
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 119/464 (25%), Positives = 203/464 (43%), Gaps = 44/464 (9%)
Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS-------- 246
+YN +I + +++A +L+ M GY D I+YS V+ R ++D
Sbjct: 248 SYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 307
Query: 247 ----------------SLLQKLYKEIECDK---------IELDGQLLNDVIVGFAKAGDA 281
LL ++ K E ++ I D + +I GF K GD
Sbjct: 308 KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDI 367
Query: 282 SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNAL 341
A +F ++P TY A+I+ G +EA +F E+ GL+P + + L
Sbjct: 368 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTEL 427
Query: 342 LKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA 401
+ GY K G++KDA V + M ++G P+ TY+ LID G +SA +L EM
Sbjct: 428 INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 487
Query: 402 KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA 461
+PN F Y+ I+ G G + +++ E +++G+ DT Y ++D + K + A
Sbjct: 488 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQE 547
Query: 462 AFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLG 521
ML +G++P +T+N L++ G + E+L M +G P TT+N ++
Sbjct: 548 ILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYC 607
Query: 522 EQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRV 581
+ + + +M ++G+ P+ TY LV + C +A F+
Sbjct: 608 IRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGH-----------CKARNMKEAWFLFQE 656
Query: 582 MRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPD 625
M+ G S + LI F + ++ EA V M+ GL D
Sbjct: 657 MKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 700
Score = 147 bits (371), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 109/390 (27%), Positives = 169/390 (43%), Gaps = 27/390 (6%)
Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGY-LKD 353
G P+ + L + G EA VFE++ GL + N L K Y
Sbjct: 172 GSDPRV--FDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTAT 229
Query: 354 AEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA 413
A V E GV + +Y+++I GR + A +L ME+ P+ YS ++
Sbjct: 230 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 289
Query: 414 GYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
GY GE + +++++ MK G++P+++ Y +I + L A AF M+ +GI P
Sbjct: 290 GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 349
Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
DT+ + TLID K G A + F EM R P TY +I+ + + +L
Sbjct: 350 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 409
Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE------------------------CLE 569
M +GL P+ VT+T L++ Y ++G DA C E
Sbjct: 410 HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE 469
Query: 570 GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
G D A M GL+P+ NS++N + EA ++ + GL D VTY
Sbjct: 470 GDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTY 529
Query: 630 TTLMKALIRVDKFHKVPAVYEEMILSGCTP 659
TTLM A + + K + +EM+ G P
Sbjct: 530 TTLMDAYCKSGEMDKAQEILKEMLGKGLQP 559
Score = 120 bits (302), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 148/314 (47%), Gaps = 10/314 (3%)
Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSS--LLQK 251
+T+ LI+ + ++ A + + M Q G + + Y+ +I L + +DS+ LL +
Sbjct: 422 VTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHE 481
Query: 252 LYKEIECDKIELDGQLL--NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITA 309
++K I L + N ++ G K+G+ +A++ +G + GL+ T TY ++ A
Sbjct: 482 MWK------IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDA 535
Query: 310 LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPD 369
SG +A+ + +E+ GL+P +N L+ G+ G L+D E +++ M G+ P+
Sbjct: 536 YCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPN 595
Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
T++ L+ Y ++A + K+M P+ Y ++ G+ + + + +
Sbjct: 596 ATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQ 655
Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
EMK G Y+V+I F K A FD+M EG+ D ++ D +K
Sbjct: 656 EMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGK 715
Query: 490 RYDRAEELFEEMQE 503
R D + +E+ E
Sbjct: 716 RPDTIVDPIDEIIE 729
Score = 37.0 bits (84), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 41/86 (47%)
Query: 575 AVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMK 634
A+ FR G+ + + N +I+ + R EA +L M+ G PDV++Y+T++
Sbjct: 230 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 289
Query: 635 ALIRVDKFHKVPAVYEEMILSGCTPD 660
R + KV + E M G P+
Sbjct: 290 GYCRFGELDKVWKLIEVMKRKGLKPN 315
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 186 bits (472), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 129/486 (26%), Positives = 232/486 (47%), Gaps = 19/486 (3%)
Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL--LQKLY 253
++ L+SA A+ + ++ KM G + Y+++I L R +++ +L L K+
Sbjct: 68 FSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMM 127
Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
K I LLN GF S+A+ + +G P T T+ ++ L
Sbjct: 128 KLGYGPSIVTLNSLLN----GFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQH 183
Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
+ EA A+ E + G +P Y A++ G K G A ++++ME+ + D Y
Sbjct: 184 NKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIY 243
Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
S +ID+ + A + EM+ +P+ F YS +++ + G W ++L +M
Sbjct: 244 STVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLE 303
Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
+ P+ +N +ID F K L A FD M+ I+P+ +T+N+LI+ R D
Sbjct: 304 RKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDE 363
Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
A+++F M + P TYN +IN + ++ D L +M +GL+ N VTYTTL
Sbjct: 364 AQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTL-- 421
Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
I+G F A +C D A F+ M +DG+ P+ + N+L++ ++ + +A V
Sbjct: 422 IHG----FFQASDC-----DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVV 472
Query: 614 LQYMKENGLKPDVVTYTTLMKALIRVDKFHKVPAVYEEMILSGCTPDRKARAMLRSALRY 673
+Y++++ ++PD+ TY + + + + K ++ + L G PD A + S +
Sbjct: 473 FEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISG--F 530
Query: 674 MKQTLK 679
K+ LK
Sbjct: 531 CKKGLK 536
Score = 181 bits (459), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 123/502 (24%), Positives = 225/502 (44%), Gaps = 31/502 (6%)
Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLTPL-----TYNALISACARNDDLEKALNLMSKMR 220
+S L+ A+ + +K ++ + + TYN +I+ R L AL ++ KM
Sbjct: 68 FSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMM 127
Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
+ GY + + ++ N+I ++ L ++ + D ++ G +
Sbjct: 128 KLGYGPSIVTLNSLLNGFCHGNRISEAV--ALVDQMVEMGYQPDTVTFTTLVHGLFQHNK 185
Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
AS+A+ + G P TY AVI L G A + ++++ ++ Y+
Sbjct: 186 ASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYST 245
Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
++ K ++ DA + +EM+ G+ PD TYS LI N GRW A +L +M
Sbjct: 246 VIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERK 305
Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
PN ++ ++ + G+ ++ EM ++P+ YN +I+ F ++ L A
Sbjct: 306 INPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQ 365
Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
F M+S+ PD +T+NTLI+ K + ELF +M RG T TY +I+
Sbjct: 366 QIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGF 425
Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAI--------------- 565
+ ++ + + M + G+ PN++TY TL+D ++G+ + A+
Sbjct: 426 FQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDI 485
Query: 566 ---------ECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQY 616
C G + + F + G+KP +A N++I+ F + EA+ +
Sbjct: 486 YTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIK 545
Query: 617 MKENGLKPDVVTYTTLMKALIR 638
MKE+G PD TY TL++A +R
Sbjct: 546 MKEDGPLPDSGTYNTLIRAHLR 567
Score = 170 bits (430), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 140/520 (26%), Positives = 240/520 (46%), Gaps = 59/520 (11%)
Query: 130 HSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELL-YSILIHALGRSEKLYEAFLLSQR 188
+SLL C N I A A+V Q + Y + + ++ L+H L + K EA L +R
Sbjct: 139 NSLLNGFCHGNR-ISEAVALVD--QMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVER 195
Query: 189 QRLTP-----LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
+ +TY A+I+ + + + ALNL++KM + D + YS VI SL +
Sbjct: 196 MVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRH 255
Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
+D +L L+ E++ I D + +I G S A R L ++P T+
Sbjct: 256 VDDAL--NLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTF 313
Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
++I A + G+ IEAE +F+E+ + + P YN+L+ G+ L +A+ + + M
Sbjct: 314 NSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVS 373
Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
LPD TY+ LI+ + A + V+ ME+ +RD
Sbjct: 374 KDCLPDVVTYNTLINGFCKAKK------VVDGMEL----------------FRD------ 405
Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
M G+ +T Y +I F + + +A F +M+S+G+ P+ +T+NTL+D
Sbjct: 406 -------MSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLD 458
Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
K G+ ++A +FE +Q+ P TYNIM + + + ED L ++ +G+ P
Sbjct: 459 GLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKP 518
Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
+V+ Y T++ + C +GL ++A F M+ DG P + N+LI A
Sbjct: 519 DVIAYNTMISGF-----------CKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLR 567
Query: 604 DQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI--RVDK 641
D A + +++ M+ D TY + L R+DK
Sbjct: 568 DGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDGRLDK 607
Score = 127 bits (318), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 93/397 (23%), Positives = 183/397 (46%), Gaps = 9/397 (2%)
Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLL--- 185
+ +++ LC DLA +++ ++K + + ++YS +I +L + + +A L
Sbjct: 208 YGAVINGLCKRGEP-DLALNLLNKMEKGKI-EADVVIYSTVIDSLCKYRHVDDALNLFTE 265
Query: 186 --SQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
++ R TY++LIS A L+S M + + + + ++ +I + + K
Sbjct: 266 MDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGK 325
Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
+ + +KL+ E+ I+ + N +I GF +A + + P TY
Sbjct: 326 LIEA--EKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTY 383
Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
+I + + ++ +F ++ GL T Y L+ G+ + +A+ V +M
Sbjct: 384 NTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVS 443
Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
GV P+ TY+ L+D G+ E A +V + ++ S +P+ + Y+ + G G+ +
Sbjct: 444 DGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVED 503
Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
+ + + GV+PD YN MI F K A F +M +G PD+ T+NTLI
Sbjct: 504 GWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIR 563
Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
H + G + EL +EM+ + +TY ++ ++L
Sbjct: 564 AHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML 600
Score = 109 bits (272), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 147/345 (42%), Gaps = 46/345 (13%)
Query: 351 LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSR 410
L +A + EM +S P +S L+ A A +++ ++ME+ N + Y+
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 411 ILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG 470
++ R + +L +M G P N +++ F N + A+A D+M+ G
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 471 IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI------------- 517
+PDT+T+ TL+ F+ + A L E M +G P TY +I
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 518 NLLGEQERW----------------------EDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
NLL + E+ +D L M +G+ P+V TY++L+
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCL 285
Query: 556 GQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ 615
GR+ DA L + ++ +N P+ + NSLI+AF ++ + EA +
Sbjct: 286 CNYGRWSDASRLLSDMLERKIN-----------PNVVTFNSLIDAFAKEGKLIEAEKLFD 334
Query: 616 YMKENGLKPDVVTYTTLMKALIRVDKFHKVPAVYEEMILSGCTPD 660
M + + P++VTY +L+ D+ + ++ M+ C PD
Sbjct: 335 EMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPD 379
Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 88/171 (51%), Gaps = 11/171 (6%)
Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
+ D A +LF EM + FP ++ +++ + + ++++ V M G+ N+ TY
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 550 TLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
+++ + + A+ L ++M+ G PS + LNSL+N F R +E
Sbjct: 105 IMINCLCRRSQLSFALAILG----------KMMKL-GYGPSIVTLNSLLNGFCHGNRISE 153
Query: 610 AFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVPAVYEEMILSGCTPD 660
A A++ M E G +PD VT+TTL+ L + +K + A+ E M++ GC PD
Sbjct: 154 AVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPD 204
Score = 67.0 bits (162), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 101/242 (41%), Gaps = 11/242 (4%)
Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
EM S P ++ ++ K ++ ++M G+ + T+N +I+C +
Sbjct: 55 EMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRS 114
Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
+ A + +M + GY P T N ++N R + L+ M G P+ VT+T
Sbjct: 115 QLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFT 174
Query: 550 TLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
TLV Q + +A+ +E M G +P + ++IN +
Sbjct: 175 TLVHGLFQHNKASEAVALVER-----------MVVKGCQPDLVTYGAVINGLCKRGEPDL 223
Query: 610 AFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVPAVYEEMILSGCTPDRKARAMLRS 669
A +L M++ ++ DVV Y+T++ +L + ++ EM G PD + L S
Sbjct: 224 ALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLIS 283
Query: 670 AL 671
L
Sbjct: 284 CL 285
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 186 bits (472), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 138/527 (26%), Positives = 229/527 (43%), Gaps = 50/527 (9%)
Query: 191 LTPL--TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL 248
L PL TY+ LI + LE A +L+ +M G D YSL+I L + D++
Sbjct: 273 LVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA- 331
Query: 249 LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTA------- 301
+ L E+ I + + + I +K G KA GL P+
Sbjct: 332 -KGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIE 390
Query: 302 ----------------------------TYAAVITALSNSGRTIEAEAVFEELKESGLKP 333
TY V+ + +SG A + +E+ SG +P
Sbjct: 391 GYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRP 450
Query: 334 RTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVL 393
Y L+K +++ DA V+ EM+ G+ PD Y+ LI + A R + AR L
Sbjct: 451 NVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFL 510
Query: 394 KEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKY 453
EM + KPN+F Y ++GY + E+ + +KEM+ GV P+ +I+ + K
Sbjct: 511 VEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKK 570
Query: 454 NCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTY 513
+ A +A+ M+ +GI D T+ L++ FK + D AEE+F EM+ +G P +Y
Sbjct: 571 GKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSY 630
Query: 514 NIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSD 573
++IN + + + M +GL PNV+ Y L+ + +SG + A E L+ +S
Sbjct: 631 GVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMS- 689
Query: 574 QAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
GL P+ + ++I+ + + AEAF + MK GL PD YTTL+
Sbjct: 690 ----------VKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLV 739
Query: 634 KALIRVDKFHKVPAVYEEMILSGCTPDRKARAMLRSALRYMKQTLKT 680
R++ + ++ + A++ ++ K LKT
Sbjct: 740 DGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKT 786
Score = 177 bits (450), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 135/539 (25%), Positives = 237/539 (43%), Gaps = 58/539 (10%)
Query: 166 YSILIHALGRSEKLYEAF--LLSQRQR---LTPLTYNALISACARNDDLEKALNLMSKMR 220
Y+ LI R + + + + L+ ++R ++P TY ++ + DL+ A N++ +M
Sbjct: 385 YASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMI 444
Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
G + + Y+ +I++ + ++ ++ ++ KE++ I D N +I+G +KA
Sbjct: 445 ASGCRPNVVIYTTLIKTFLQNSRFGDAM--RVLKEMKEQGIAPDIFCYNSLIIGLSKAKR 502
Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVI-------------------------------TA 309
+A FL GL P TY A I T
Sbjct: 503 MDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTG 562
Query: 310 LSN----SGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG 365
L N G+ IEA + + + + G+ K Y L+ G K + DAE + EM G
Sbjct: 563 LINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG 622
Query: 366 VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF 425
+ PD +Y +LI+ ++ G + A + EM PN IY+ +L G+ GE ++
Sbjct: 623 IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAK 682
Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
++L EM G+ P+ Y +ID + K L A FD M +G+ PD+ + TL+D
Sbjct: 683 ELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGC 742
Query: 486 FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL---GEQE-RWEDVKRLLGNMRAQGL 541
+ +RA +F ++G T +N +IN + G+ E + E + RL+ +
Sbjct: 743 CRLNDVERAITIFGT-NKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFG 801
Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
PN VTY ++D C EG + A F M+ L P+ + SL+N +
Sbjct: 802 KPNDVTYNIMIDYL-----------CKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGY 850
Query: 602 GEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVPAVYEEMILSGCTPD 660
+ R AE F V G++PD + Y+ ++ A ++ K + ++M D
Sbjct: 851 DKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDD 909
Score = 149 bits (376), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 127/551 (23%), Positives = 238/551 (43%), Gaps = 59/551 (10%)
Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLL--- 185
+ +++K +CSS +D AY +V + C ++Y+ LI ++ + +A +
Sbjct: 420 YGTVVKGMCSS-GDLDGAYNIVKEMIASG-CRPNVVIYTTLIKTFLQNSRFGDAMRVLKE 477
Query: 186 SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
+ Q + P YN+LI ++ +++A + + +M ++G + Y I ++
Sbjct: 478 MKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASE 537
Query: 244 IDSSLLQKLYKEI-ECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
S+ K KE+ EC + + L +I + K G +A G+ T
Sbjct: 538 FASA--DKYVKEMRECGVLP-NKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKT 594
Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
Y ++ L + + +AE +F E++ G+ P +Y L+ G+ K+G ++ A + EM
Sbjct: 595 YTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMV 654
Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
G+ P+ Y++L+ + +G E A+ +L EM V PN+ Y I+ GY G+
Sbjct: 655 EEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLA 714
Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAF------------------- 463
F++ EMK G+ PD+ Y ++D + N + A+ F
Sbjct: 715 EAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALIN 774
Query: 464 ---------------DRMLSEGIE----PDTITWNTLIDCHFKCGRYDRAEELFEEMQER 504
+R++ + P+ +T+N +ID K G + A+ELF +MQ
Sbjct: 775 WVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNA 834
Query: 505 GYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA 564
P TY ++N + R ++ + A G+ P+ + Y+ +++ + + G A
Sbjct: 835 NLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKA 894
Query: 565 IECLEGLSDQ--AVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGL 622
+ L DQ A NA DG K S +L++ F + A V++ M
Sbjct: 895 LV----LVDQMFAKNAV----DDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQY 946
Query: 623 KPDVVTYTTLM 633
PD T L+
Sbjct: 947 IPDSATVIELI 957
Score = 133 bits (335), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 159/366 (43%), Gaps = 11/366 (3%)
Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
GL P TY +I L R +A+++ E+ G+ Y+ L+ G +K A
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA 331
Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
+ +V EM G+ + Y I + G E A+ + M S P + Y+ ++ G
Sbjct: 332 KGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEG 391
Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
Y ++ +++L EMK + + Y ++ L A M++ G P+
Sbjct: 392 YCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPN 451
Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
+ + TLI + R+ A + +EM+E+G P YN +I L + +R ++ + L
Sbjct: 452 VVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLV 511
Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLAL 594
M GL PN TY + Y ++ F A D+ V + MR G+ P+ +
Sbjct: 512 EMVENGLKPNAFTYGAFISGYIEASEFASA--------DKYV---KEMRECGVLPNKVLC 560
Query: 595 NSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVPAVYEEMIL 654
LIN + + + EA + + M + G+ D TYT LM L + DK ++ EM
Sbjct: 561 TGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRG 620
Query: 655 SGCTPD 660
G PD
Sbjct: 621 KGIAPD 626
Score = 116 bits (290), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 88/368 (23%), Positives = 175/368 (47%), Gaps = 19/368 (5%)
Query: 166 YSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISACARNDDLEKALNLMSKMR 220
Y++L++ L +++K+ +A + + R + P +Y LI+ ++ +++KA ++ +M
Sbjct: 595 YTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMV 654
Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
++G + I Y++++ R+ +I+ + ++L E+ + + +I G+ K+GD
Sbjct: 655 EEGLTPNVIIYNMLLGGFCRSGEIEKA--KELLDEMSVKGLHPNAVTYCTIIDGYCKSGD 712
Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
++A R + GL P + Y ++ A +F K+ G T +NA
Sbjct: 713 LAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKK-GCASSTAPFNA 771
Query: 341 LLKGYVKMGYLKDAEFVVSEM-----ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKE 395
L+ K G + V++ + +R G P++ TY+++ID G E+A+ + +
Sbjct: 772 LINWVFKFGKTELKTEVLNRLMDGSFDRFGK-PNDVTYNIMIDYLCKEGNLEAAKELFHQ 830
Query: 396 MEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNC 455
M+ ++ P Y+ +L GY G F V E ++G+EPD Y+V+I+ F K
Sbjct: 831 MQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGM 890
Query: 456 LHHAMAAFDRMLS-----EGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCT 510
A+ D+M + +G + T L+ K G + AE++ E M Y P +
Sbjct: 891 TTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDS 950
Query: 511 TTYNIMIN 518
T +IN
Sbjct: 951 ATVIELIN 958
Score = 100 bits (249), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 98/393 (24%), Positives = 149/393 (37%), Gaps = 42/393 (10%)
Query: 294 VGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKD 353
VG S + + G EA VF L PR LL ++ L
Sbjct: 145 VGKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDL 204
Query: 354 AEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVL--KEMEVSHAKPNSFIYSRI 411
V M V+ D TY +LI A+ AG + + VL E E A N
Sbjct: 205 FWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNV------ 258
Query: 412 LAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGI 471
++ + M G+ P + Y+V+ID K L A + M S G+
Sbjct: 259 ----------DGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGV 308
Query: 472 EPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKR 531
D T++ LID K D A+ L EM G Y+ I ++ ++ E K
Sbjct: 309 SLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKA 368
Query: 532 LLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE------------------------C 567
L M A GL+P Y +L++ Y + E C
Sbjct: 369 LFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMC 428
Query: 568 LEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVV 627
G D A N + M G +P+ + +LI F ++ R +A VL+ MKE G+ PD+
Sbjct: 429 SSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIF 488
Query: 628 TYTTLMKALIRVDKFHKVPAVYEEMILSGCTPD 660
Y +L+ L + + + + EM+ +G P+
Sbjct: 489 CYNSLIIGLSKAKRMDEARSFLVEMVENGLKPN 521
>sp|Q9SIC9|PP178_ARATH Pentatricopeptide repeat-containing protein At2g31400,
chloroplastic OS=Arabidopsis thaliana GN=At2g31400 PE=2
SV=1
Length = 918
Score = 186 bits (472), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 118/415 (28%), Positives = 208/415 (50%), Gaps = 14/415 (3%)
Query: 226 CDFINYSLVIQSLTRTNKIDSSL-LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKA 284
C + + +I+ L N+ D ++ + + E K E G+L + +I + G + A
Sbjct: 194 CGSDDCTYIIRELGNRNECDKAVGFYEFAVKRERRKNE-QGKLASAMISTLGRYGKVTIA 252
Query: 285 MRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKG 344
R A G ++A+I+A SG EA +VF +KE GL+P YNA++
Sbjct: 253 KRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDA 312
Query: 345 YVKMGY-LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKP 403
K G K EM+R+GV PD T++ L+ + G WE+AR + EM +
Sbjct: 313 CGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQ 372
Query: 404 NSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAF 463
+ F Y+ +L G+ F++L +M + P+ Y+ +ID F K A+ F
Sbjct: 373 DVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLF 432
Query: 464 DRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQ 523
M GI D +++NTL+ + K GR + A ++ EM G TYN ++ G+Q
Sbjct: 433 GEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQ 492
Query: 524 ERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMR 583
++++VK++ M+ + +LPN++TY+TL+D Y + G + +A+E FR +
Sbjct: 493 GKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEI-----------FREFK 541
Query: 584 TDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
+ GL+ + ++LI+A ++ A +++ M + G+ P+VVTY +++ A R
Sbjct: 542 SAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGR 596
Score = 161 bits (408), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 116/437 (26%), Positives = 203/437 (46%), Gaps = 37/437 (8%)
Query: 166 YSILIHALGRS---EKLYEAFLLSQRQRLTP--LTYNALISACARND-DLEKALNLMSKM 219
+S LI A GRS E+ F + L P +TYNA+I AC + + ++ +M
Sbjct: 271 FSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEM 330
Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
+++G D I ++ ++ +R +++ + L+ E+ +IE D N ++ K G
Sbjct: 331 QRNGVQPDRITFNSLLAVCSRGGLWEAA--RNLFDEMTNRRIEQDVFSYNTLLDAICKGG 388
Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
A L + P +Y+ VI + +GR EA +F E++ G+ +YN
Sbjct: 389 QMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYN 448
Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
LL Y K+G ++A ++ EM G+ D TY+ L+ Y G+++ + V EM+
Sbjct: 449 TLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKRE 508
Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
H PN YS ++ GY G ++ ++ +E KS+G+ D Y+ +ID K + A
Sbjct: 509 HVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSA 568
Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCT--------- 510
++ D M EGI P+ +T+N++ID + DR+ + G P +
Sbjct: 569 VSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADY----SNGGSLPFSSSALSALTE 624
Query: 511 TTYNIMINLLGE-------------QERWEDVKRLLGNMRAQGLL---PNVVTYTTLVDI 554
T N +I L G+ +E +++ +L R L PNVVT++ +++
Sbjct: 625 TEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNA 684
Query: 555 YGQSGRFDDAIECLEGL 571
+ F+DA LE L
Sbjct: 685 CSRCNSFEDASMLLEEL 701
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 125/516 (24%), Positives = 227/516 (43%), Gaps = 73/516 (14%)
Query: 165 LYSILIHALGR------SEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSK 218
L S +I LGR +++++E T ++ALISA R+ E+A+++ +
Sbjct: 235 LASAMISTLGRYGKVTIAKRIFETAFAGGYGN-TVYAFSALISAYGRSGLHEEAISVFNS 293
Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
M++ G + + Y+ VI + C K ++ +
Sbjct: 294 MKEYGLRPNLVTYNAVIDA--------------------CGKGGMEFK------------ 321
Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
+ +F Q G+ P T+ +++ S G A +F+E+ ++ +Y
Sbjct: 322 ----QVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSY 377
Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
N LL K G + A ++++M ++P+ +YS +ID +A AGR++ A + EM
Sbjct: 378 NTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRY 437
Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
+ Y+ +L+ Y G + +L+EM S G++ D YN ++ +GK
Sbjct: 438 LGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDE 497
Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
F M E + P+ +T++TLID + K G Y A E+F E + G Y+ +I+
Sbjct: 498 VKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALID 557
Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEG----LSDQ 574
L + L+ M +G+ PNVVTY +++D +G+S D + + G S
Sbjct: 558 ALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSS 617
Query: 575 AVNAFRVMRTDGLKPSNLALNSLINAFGE--------DQRDAEA--------FAVLQYMK 618
A++A + T+G N +I FG+ +D E V + M
Sbjct: 618 ALSA--LTETEG--------NRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMH 667
Query: 619 ENGLKPDVVTYTTLMKALIRVDKFHKVPAVYEEMIL 654
+ +KP+VVT++ ++ A R + F + EE+ L
Sbjct: 668 QLEIKPNVVTFSAILNACSRCNSFEDASMLLEELRL 703
Score = 146 bits (368), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 175/358 (48%), Gaps = 12/358 (3%)
Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
+A+I+ L G+ A+ +FE G A++AL+ Y + G ++A V + M+
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 364 SGVLPDEHTYSLLIDAYANAG-RWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
G+ P+ TY+ +IDA G ++ EM+ + +P+ ++ +LA G W+
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWE 356
Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
+ EM + +E D YN ++D K + A +M + I P+ ++++T+I
Sbjct: 357 AARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVI 416
Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
D K GR+D A LF EM+ G +YN ++++ + R E+ +L M + G+
Sbjct: 417 DGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIK 476
Query: 543 PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
+VVTY L+ YG+ G++D+ + F M+ + + P+ L ++LI+ +
Sbjct: 477 KDVVTYNALLGGYGKQGKYDEVKKV-----------FTEMKREHVLPNLLTYSTLIDGYS 525
Query: 603 EDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVPAVYEEMILSGCTPD 660
+ EA + + K GL+ DVV Y+ L+ AL + ++ +EM G +P+
Sbjct: 526 KGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPN 583
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 185 bits (470), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 137/527 (25%), Positives = 233/527 (44%), Gaps = 23/527 (4%)
Query: 142 SIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQ-----RLTPLTY 196
+++L VV + NL +Y+ LI +L + K +EA LL R R +TY
Sbjct: 351 ALNLVKRVVDFGVSPNL-----FVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTY 405
Query: 197 NALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEI 256
+ LI R L+ AL+ + +M G Y+ +I + I ++ + E+
Sbjct: 406 SILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAA--EGFMAEM 463
Query: 257 ECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRT 316
K+E ++ G+ G +KA+R G G++P T+ +++ L +G
Sbjct: 464 INKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLI 523
Query: 317 IEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLL 376
+A +F E+ E +KP YN +++GY + G + A + EM G++PD ++Y L
Sbjct: 524 RDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPL 583
Query: 377 IDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGV 436
I G+ A++ + + + + N Y+ +L G+ G+ + V +EM GV
Sbjct: 584 IHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGV 643
Query: 437 EPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEE 496
+ D Y V+ID K+ M G++PD + + ++ID K G + A
Sbjct: 644 DLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFG 703
Query: 497 LFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYG 556
+++ M G P TY +IN L + + + L M+ +PN VTY +DI
Sbjct: 704 IWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILT 763
Query: 557 QSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQY 616
+ G D +AV + GL + N LI F R EA ++
Sbjct: 764 K-GEVD---------MQKAVELHNAI-LKGLLANTATYNMLIRGFCRQGRIEEASELITR 812
Query: 617 MKENGLKPDVVTYTTLMKALIRVDKFHKVPAVYEEMILSGCTPDRKA 663
M +G+ PD +TYTT++ L R + K ++ M G PDR A
Sbjct: 813 MIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVA 859
Score = 159 bits (401), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 103/465 (22%), Positives = 210/465 (45%), Gaps = 13/465 (2%)
Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE 255
YN LI + + +A+ + + D + Y ++ L + + + L ++ E
Sbjct: 265 YNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGL--EMMDE 322
Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
+ C + ++ ++ G K G +A+ + G+SP Y A+I +L +
Sbjct: 323 MLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRK 382
Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
EAE +F+ + + GL+P Y+ L+ + + G L A + EM +G+ + Y+
Sbjct: 383 FHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNS 442
Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
LI+ + G +A + EM +P Y+ ++ GY +G+ + ++ EM G
Sbjct: 443 LINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKG 502
Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
+ P + + ++ + + A+ F+ M ++P+ +T+N +I+ + + G +A
Sbjct: 503 IAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAF 562
Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
E +EM E+G P T +Y +I+ L + + K + + N + YT L+ +
Sbjct: 563 EFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGF 622
Query: 556 GQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ 615
C EG ++A++ + M G+ + LI+ + + F +L+
Sbjct: 623 -----------CREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLK 671
Query: 616 YMKENGLKPDVVTYTTLMKALIRVDKFHKVPAVYEEMILSGCTPD 660
M + GLKPD V YT+++ A + F + +++ MI GC P+
Sbjct: 672 EMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPN 716
Score = 140 bits (352), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 111/447 (24%), Positives = 192/447 (42%), Gaps = 23/447 (5%)
Query: 197 NALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEI 256
++L+ + +E+ALNL+ ++ G + Y+ +I SL + K + E+
Sbjct: 336 SSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEA-------EL 388
Query: 257 ECDKIELDGQLLNDV-----IVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
D++ G NDV I F + G A+ FLG GL Y ++I
Sbjct: 389 LFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHC 448
Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
G AE E+ L+P Y +L+ GY G + A + EM G+ P +
Sbjct: 449 KFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIY 508
Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
T++ L+ AG A + EM + KPN Y+ ++ GY + G+ + F+ LKEM
Sbjct: 509 TFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEM 568
Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
G+ PDT+ Y +I A D + E + I + L+ + G+
Sbjct: 569 TEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKL 628
Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
+ A + +EM +RG Y ++I+ + + + LL M +GL P+ V YT++
Sbjct: 629 EEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSM 688
Query: 552 VDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAF 611
+D ++G F +A G+ D +N +G P+ + ++IN + EA
Sbjct: 689 IDAKSKTGDFKEAF----GIWDLMIN-------EGCVPNEVTYTAVINGLCKAGFVNEAE 737
Query: 612 AVLQYMKENGLKPDVVTYTTLMKALIR 638
+ M+ P+ VTY + L +
Sbjct: 738 VLCSKMQPVSSVPNQVTYGCFLDILTK 764
Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 116/474 (24%), Positives = 191/474 (40%), Gaps = 63/474 (13%)
Query: 231 YSLVIQSLTRTNKI-DSSLLQKLYKEIECDKIEL--DGQLLNDVIVGFAKAGDASKAMRF 287
+ L+IQ R+ ++ D L+ K+ K+ L + + L+ ++ G K AM
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMM----ITKVSLLPEVRTLSALLHGLVKFRHFGLAMEL 214
Query: 288 LGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVK 347
VG+ P Y VI +L A+ + ++ +G YN L+ G K
Sbjct: 215 FNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCK 274
Query: 348 MGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFI 407
+ +A + ++ + PD TY L+ +E ++ EM P+
Sbjct: 275 KQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAA 334
Query: 408 YSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRML 467
S ++ G R RG+ + ++K + GV P+ YN +ID+ K H A FDRM
Sbjct: 335 VSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMG 394
Query: 468 SEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN--------- 518
G+ P+ +T++ LID + G+ D A EM + G YN +IN
Sbjct: 395 KIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDIS 454
Query: 519 -----------------------LLG---EQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
L+G + + RL M +G+ P++ T+TTL+
Sbjct: 455 AAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLL 514
Query: 553 DIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFA 612
SG F GL AV F M +KP+ + N +I + E+ ++AF
Sbjct: 515 -----SGLFR------AGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFE 563
Query: 613 VLQYMKENGLKPDVVTYTTLMKAL----------IRVDKFHKVPAVYEEMILSG 656
L+ M E G+ PD +Y L+ L + VD HK E+ +G
Sbjct: 564 FLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTG 617
Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 158/363 (43%), Gaps = 18/363 (4%)
Query: 313 SGRTIEAEAVFEEL-KESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
S R ++ VF+ + + L P + +ALL G VK + A + ++M G+ PD +
Sbjct: 169 SRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVY 228
Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
Y+ +I + A+ ++ ME + N Y+ ++ G + + + K++
Sbjct: 229 IYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDL 288
Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
++PD Y ++ K + D ML P ++L++ K G+
Sbjct: 289 AGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKI 348
Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
+ A L + + + G P YN +I+ L + ++ + + L M GL PN VTY+ L
Sbjct: 349 EEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSIL 408
Query: 552 VDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINA---FGEDQRDA 608
+D++ + G+ D A+ L + D GLK S NSLIN FG D A
Sbjct: 409 IDMFCRRGKLDTALSFLGEMVDT-----------GLKLSVYPYNSLINGHCKFG-DISAA 456
Query: 609 EAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVPAVYEEMILSGCTPDRKARAMLR 668
E F + M L+P VVTYT+LM K +K +Y EM G P L
Sbjct: 457 EGF--MAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLL 514
Query: 669 SAL 671
S L
Sbjct: 515 SGL 517
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 110/450 (24%), Positives = 180/450 (40%), Gaps = 54/450 (12%)
Query: 180 YEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT 239
+ A +++++ T +TY +L+ + KAL L +M G ++ ++ L
Sbjct: 459 FMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLF 518
Query: 240 RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPK 299
R I ++ KL+ E+ ++ + N +I G+ + GD SKA FL G+ P
Sbjct: 519 RAGLIRDAV--KLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPD 576
Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
T +Y +I L +G+ EA+ + L + + Y LL G+ + G L++A V
Sbjct: 577 TYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQ 636
Query: 360 EMERSGV-----------------------------------LPDEHTYSLLIDAYANAG 384
EM + GV PD+ Y+ +IDA + G
Sbjct: 637 EMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTG 696
Query: 385 RWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYN 444
++ A + M PN Y+ ++ G G + +M+ P+ Y
Sbjct: 697 DFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYG 756
Query: 445 VMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQER 504
+D K + +G+ +T T+N LI + GR + A EL M
Sbjct: 757 CFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGD 816
Query: 505 GYFPCTTTYNIMINLLGEQERWEDVKR---LLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
G P TY MIN E R DVK+ L +M +G+ P+ V Y TL I+G
Sbjct: 817 GVSPDCITYTTMIN---ELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTL--IHGC---- 867
Query: 562 DDAIECLEGLSDQAVNAFRVMRTDGLKPSN 591
C+ G +A M GL P+N
Sbjct: 868 -----CVAGEMGKATELRNEMLRQGLIPNN 892
Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 143/350 (40%), Gaps = 38/350 (10%)
Query: 160 YSYE-LLYSILIHALGRSEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSK 218
YSY L++ + + K++ L L + Y L+ R LE+AL++ +
Sbjct: 578 YSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQE 637
Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
M Q G D + Y ++I + D L L KE+ D+
Sbjct: 638 MVQRGVDLDLVCYGVLIDGSLKHK--DRKLFFGLLKEMH-DR------------------ 676
Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
GL P Y ++I A S +G EA +++ + G P Y
Sbjct: 677 ----------------GLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTY 720
Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
A++ G K G++ +AE + S+M+ +P++ TY +D + L +
Sbjct: 721 TAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAIL 780
Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
N+ Y+ ++ G+ +G + +++ M GV PD Y MI+ + N +
Sbjct: 781 KGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKK 840
Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
A+ ++ M +GI PD + +NTLI G +A EL EM +G P
Sbjct: 841 AIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIP 890
Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 88/231 (38%), Gaps = 47/231 (20%)
Query: 443 YNVMIDTFGKYNCLHHAMAAFDRMLSE-GIEPDTITWNTLIDCHFKCGRYDRAEELFEEM 501
++++I + + + + F M+++ + P+ T + L+ K + A ELF +M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 502 QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
G P Y +I L E + K ++ +M A G N+V Y
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPY------------- 265
Query: 562 DDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENG 621
N LI+ + Q+ EA + + +
Sbjct: 266 ---------------------------------NVLIDGLCKKQKVWEAVGIKKDLAGKD 292
Query: 622 LKPDVVTYTTLMKALIRVDKFHKVPAVYEEMILSGCTPDRKARAMLRSALR 672
LKPDVVTY TL+ L +V +F + +EM+ +P A + L LR
Sbjct: 293 LKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLR 343
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 184 bits (466), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 118/470 (25%), Positives = 213/470 (45%), Gaps = 16/470 (3%)
Query: 204 ARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIEL 263
R +LE+ + M G D I + +I+ R K + K+ + +E
Sbjct: 113 VRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKA--AKILEILEGSGAVP 170
Query: 264 DGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVF 323
D N +I G+ KAG+ + A+ L + +SP TY ++ +L +SG+ +A V
Sbjct: 171 DVITYNVMISGYCKAGEINNALSVL---DRMSVSPDVVTYNTILRSLCDSGKLKQAMEVL 227
Query: 324 EELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANA 383
+ + + P Y L++ + + A ++ EM G PD TY++L++
Sbjct: 228 DRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKE 287
Query: 384 GRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFY 443
GR + A L +M S +PN ++ IL G W ++L +M G P +
Sbjct: 288 GRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTF 347
Query: 444 NVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQE 503
N++I+ + L A+ ++M G +P+++++N L+ K + DRA E E M
Sbjct: 348 NILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVS 407
Query: 504 RGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDD 563
RG +P TYN M+ L + + ED +L + ++G P ++TY T++D ++G+
Sbjct: 408 RGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGK 467
Query: 564 AIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLK 623
AI+ L+ MR LKP + +SL+ + + EA + G++
Sbjct: 468 AIKLLD-----------EMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIR 516
Query: 624 PDVVTYTTLMKALIRVDKFHKVPAVYEEMILSGCTPDRKARAMLRSALRY 673
P+ VT+ ++M L + + + MI GC P+ + +L L Y
Sbjct: 517 PNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAY 566
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 111/396 (28%), Positives = 188/396 (47%), Gaps = 28/396 (7%)
Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITA-----------LSNSGRTIEAEAVF--- 323
+G +A +F ++ G S Y++V ++ L RT E E F
Sbjct: 66 SGLNGRAQKFETLSSGYSNSNGNGHYSSVNSSFALEDVESNNHLRQMVRTGELEEGFKFL 125
Query: 324 EELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANA 383
E + G P L++G+ ++G + A ++ +E SG +PD TY+++I Y A
Sbjct: 126 ENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKA 185
Query: 384 GRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFY 443
G +A VL M VS P+ Y+ IL D G+ ++ +VL M PD Y
Sbjct: 186 GEINNALSVLDRMSVS---PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITY 242
Query: 444 NVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQE 503
++I+ + + + HAM D M G PD +T+N L++ K GR D A + +M
Sbjct: 243 TILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPS 302
Query: 504 RGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDD 563
G P T+NI++ + RW D ++LL +M +G P+VVT+ L++
Sbjct: 303 SGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFL-------- 354
Query: 564 AIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLK 623
C +GL +A++ M G +P++L+ N L++ F ++++ A L+ M G
Sbjct: 355 ---CRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCY 411
Query: 624 PDVVTYTTLMKALIRVDKFHKVPAVYEEMILSGCTP 659
PD+VTY T++ AL + K + ++ GC+P
Sbjct: 412 PDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSP 447
Score = 169 bits (428), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 111/448 (24%), Positives = 207/448 (46%), Gaps = 22/448 (4%)
Query: 191 LTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL-- 248
+ P T LI R KA ++ + G D I Y+++I + +I+++L
Sbjct: 137 IIPCT--TLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSV 194
Query: 249 LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVIT 308
L ++ + D N ++ +G +AM L P TY +I
Sbjct: 195 LDRM-------SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIE 247
Query: 309 ALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLP 368
A A + +E+++ G P YN L+ G K G L +A +++M SG P
Sbjct: 248 ATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQP 307
Query: 369 DEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVL 428
+ T+++++ + + GRW A +L +M P+ ++ ++ +G R +L
Sbjct: 308 NVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDIL 367
Query: 429 KEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKC 488
++M G +P++ YN ++ F K + A+ +RM+S G PD +T+NT++ K
Sbjct: 368 EKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKD 427
Query: 489 GRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTY 548
G+ + A E+ ++ +G P TYN +I+ L + + +LL MRA+ L P+ +TY
Sbjct: 428 GKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITY 487
Query: 549 TTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDA 608
++LV + G+ D+AI+ F G++P+ + NS++ + ++
Sbjct: 488 SSLVGGLSREGKVDEAIK-----------FFHEFERMGIRPNAVTFNSIMLGLCKSRQTD 536
Query: 609 EAFAVLQYMKENGLKPDVVTYTTLMKAL 636
A L +M G KP+ +YT L++ L
Sbjct: 537 RAIDFLVFMINRGCKPNETSYTILIEGL 564
Score = 150 bits (379), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 95/415 (22%), Positives = 198/415 (47%), Gaps = 4/415 (0%)
Query: 164 LLYSILIHALGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQ 221
+ Y+++I ++ ++ A + R ++P +TYN ++ + + L++A+ ++ +M Q
Sbjct: 173 ITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQ 232
Query: 222 DGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDA 281
+ D I Y+++I++ R + + ++ KL E+ D N ++ G K G
Sbjct: 233 RDCYPDVITYTILIEATCRDSGVGHAM--KLLDEMRDRGCTPDVVTYNVLVNGICKEGRL 290
Query: 282 SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNAL 341
+A++FL G P T+ ++ ++ ++GR ++AE + ++ G P +N L
Sbjct: 291 DEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNIL 350
Query: 342 LKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA 401
+ + G L A ++ +M + G P+ +Y+ L+ + + + A L+ M
Sbjct: 351 INFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGC 410
Query: 402 KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA 461
P+ Y+ +L G+ + ++L ++ S G P YN +ID K A+
Sbjct: 411 YPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIK 470
Query: 462 AFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLG 521
D M ++ ++PDTIT+++L+ + G+ D A + F E + G P T+N ++ L
Sbjct: 471 LLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLC 530
Query: 522 EQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
+ + + L M +G PN +YT L++ G +A+E L L ++ +
Sbjct: 531 KSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/419 (23%), Positives = 184/419 (43%), Gaps = 44/419 (10%)
Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
++++L++LC S + LQ+ CY + Y+ILI A R + A L
Sbjct: 207 YNTILRSLCDSGKLKQAMEVLDRMLQRD--CYPDVITYTILIEATCRDSGVGHAMKLLDE 264
Query: 189 QR---LTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
R TP +TYN L++ + L++A+ ++ M G + I ++++++S+ T +
Sbjct: 265 MRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGR 324
Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
+ + E +LL D++ G SP T+
Sbjct: 325 ---------WMDAE--------KLLADMLRK--------------------GFSPSVVTF 347
Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
+I L G A + E++ + G +P + +YN LL G+ K + A + M
Sbjct: 348 NILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVS 407
Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
G PD TY+ ++ A G+ E A +L ++ P Y+ ++ G G+ +
Sbjct: 408 RGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGK 467
Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
++L EM++ ++PDT Y+ ++ + + A+ F GI P+ +T+N+++
Sbjct: 468 AIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIML 527
Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
K + DRA + M RG P T+Y I+I L + ++ LL + +GL+
Sbjct: 528 GLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLM 586
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 182 bits (463), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 125/467 (26%), Positives = 219/467 (46%), Gaps = 17/467 (3%)
Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL--LQKLY 253
+N L+SA A+ + ++L KM++ G + Y+++I R ++I +L L K+
Sbjct: 13 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 72
Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
K I LLN G+ S A+ + +G P T T+ +I L
Sbjct: 73 KLGYEPSIVTLSSLLN----GYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 128
Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
+ EA A+ + + + G +P Y ++ G K G + A ++++ME + + D +
Sbjct: 129 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIF 188
Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
+ +ID+ + A + KEME +PN YS +++ G W Q+L +M
Sbjct: 189 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 248
Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
+ P+ +N +ID F K A D M+ I+PD T+N+LI+ R D+
Sbjct: 249 KKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDK 308
Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
A+++FE M + FP TYN +I + +R ED L M +GL+ + VTYTTL+
Sbjct: 309 AKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI- 367
Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
G F D G D A F+ M +DG+ P + + L++ + + +A V
Sbjct: 368 ----QGLFHD------GDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEV 417
Query: 614 LQYMKENGLKPDVVTYTTLMKALIRVDKFHKVPAVYEEMILSGCTPD 660
YM+++ +K D+ YTT+++ + + K ++ + L G P+
Sbjct: 418 FDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPN 464
Score = 177 bits (449), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 128/502 (25%), Positives = 225/502 (44%), Gaps = 31/502 (6%)
Query: 166 YSILIHALGRSEKLYEAFLLSQR-QRL----TPLTYNALISACARNDDLEKALNLMSKMR 220
++ L+ A+ + +K L ++ QRL TYN LI+ R + AL L+ KM
Sbjct: 13 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 72
Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
+ GY + S ++ +I ++ L ++ D +I G
Sbjct: 73 KLGYEPSIVTLSSLLNGYCHGKRISDAV--ALVDQMVEMGYRPDTITFTTLIHGLFLHNK 130
Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
AS+A+ + G P TY V+ L G A + +++ + ++ +N
Sbjct: 131 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNT 190
Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
++ K ++ DA + EME G+ P+ TYS LI + GRW A +L +M
Sbjct: 191 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 250
Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
PN ++ ++ + G++ ++ +M ++PD YN +I+ F ++ L A
Sbjct: 251 INPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAK 310
Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
F+ M+S+ PD T+NTLI K R + ELF EM RG T TY +I L
Sbjct: 311 QMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 370
Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE-------------- 566
++ +++ M + G+ P+++TY+ L+D +G+ + A+E
Sbjct: 371 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 430
Query: 567 ----------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQY 616
C G D + F + G+KP+ + N++I+ + EA+A+L+
Sbjct: 431 YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKK 490
Query: 617 MKENGLKPDVVTYTTLMKALIR 638
MKE+G PD TY TL++A +R
Sbjct: 491 MKEDGPLPDSGTYNTLIRAHLR 512
Score = 160 bits (404), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 124/496 (25%), Positives = 233/496 (46%), Gaps = 23/496 (4%)
Query: 130 HSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELL-YSILIHALGRSEKLYEAFLLSQR 188
+++L N S I LA A++ + K L Y ++ S L++ +++ +A L +
Sbjct: 48 YNILINCFCRRSQISLALALLGKMMK--LGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 105
Query: 189 Q-----RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
R +T+ LI ++ +A+ L+ +M Q G + + Y +V+ L +
Sbjct: 106 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 165
Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
ID + L ++E KIE D + N +I K A+ + G+ P TY
Sbjct: 166 IDLAF--NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 223
Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
+++I+ L + GR +A + ++ E + P +NAL+ +VK G +AE + +M +
Sbjct: 224 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIK 283
Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
+ PD TY+ LI+ + R + A+ + + M P+ Y+ ++ G+ +
Sbjct: 284 RSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVED 343
Query: 424 TFQVLKEMKSSGVEPDTHFYNVMID-TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
++ +EM G+ DT Y +I F +C +A F +M+S+G+ PD +T++ L+
Sbjct: 344 GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDC-DNAQKVFKQMVSDGVPPDIMTYSILL 402
Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
D G+ ++A E+F+ MQ+ Y MI + + + +D L ++ +G+
Sbjct: 403 DGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVK 462
Query: 543 PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
PNVVTY T++ SG C + L +A + M+ DG P + N+LI A
Sbjct: 463 PNVVTYNTMI-----SGL------CSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHL 511
Query: 603 EDQRDAEAFAVLQYMK 618
D A + +++ M+
Sbjct: 512 RDGDKAASAELIREMR 527
Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 94/398 (23%), Positives = 177/398 (44%), Gaps = 24/398 (6%)
Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
P + +++A++ + ++ E+++ G+ YN L+ + + + A +
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
+ +M + G P T S L++ Y + R A ++ +M +P++ ++ ++ G
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTIT 477
+ ++ M G +P+ Y V+++ K + A ++M + IE D +
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
+NT+ID K D A LF+EM+ +G P TY+ +I+ L RW D +LL +M
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 538 AQGLLPNVVTYTTLVDIYGQSGRF-------DDAIE-----------------CLEGLSD 573
+ + PN+VT+ L+D + + G+F DD I+ C+ D
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307
Query: 574 QAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
+A F M + P N+LI F + +R + + + M GL D VTYTTL+
Sbjct: 308 KAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 367
Query: 634 KALIRVDKFHKVPAVYEEMILSGCTPDRKARAMLRSAL 671
+ L V+++M+ G PD ++L L
Sbjct: 368 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 405
Score = 128 bits (321), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/401 (24%), Positives = 178/401 (44%), Gaps = 8/401 (1%)
Query: 125 PAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFL 184
P + + ++ N IDLA+ +++ ++ + + ++++ +I +L + + +A
Sbjct: 148 PNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKI-EADVVIFNTIIDSLCKYRHVDDALN 206
Query: 185 LSQRQ-----RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT 239
L + R +TY++LIS A L+S M + + + + ++ +I +
Sbjct: 207 LFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFV 266
Query: 240 RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPK 299
+ K + +KL+ ++ I+ D N +I GF KA + P
Sbjct: 267 KEGKFVEA--EKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPD 324
Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
TY +I S R + +F E+ GL T Y L++G G +A+ V
Sbjct: 325 LDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFK 384
Query: 360 EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG 419
+M GV PD TYS+L+D N G+ E A V M+ S K + +IY+ ++ G G
Sbjct: 385 QMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAG 444
Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWN 479
+ + + + GV+P+ YN MI L A A +M +G PD+ T+N
Sbjct: 445 KVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYN 504
Query: 480 TLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
TLI H + G + EL EM+ + +T ++ N+L
Sbjct: 505 TLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML 545
Score = 109 bits (272), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 143/300 (47%), Gaps = 11/300 (3%)
Query: 361 MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
M +S LP ++ L+ A A +++ + ++M+ N + Y+ ++ + R +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 421 WQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNT 480
+L +M G EP + +++ + + A+A D+M+ G PDTIT+ T
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 481 LIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
LI F + A L + M +RG P TY +++N L ++ + LL M A
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 541 LLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINA 600
+ +VV + T++D + DDA+ N F+ M T G++P+ + +SLI+
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDAL-----------NLFKEMETKGIRPNVVTYSSLISC 229
Query: 601 FGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVPAVYEEMILSGCTPD 660
R ++A +L M E + P++VT+ L+ A ++ KF + ++++MI PD
Sbjct: 230 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPD 289
>sp|Q9SZ52|PP344_ARATH Pentatricopeptide repeat-containing protein At4g31850,
chloroplastic OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1
Length = 1112
Score = 181 bits (460), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 127/489 (25%), Positives = 224/489 (45%), Gaps = 15/489 (3%)
Query: 174 GRSEKLYEAFLLSQRQ--RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINY 231
G+ E++ F L Q++ + TY + + + L++A + KMR+ G+ + +Y
Sbjct: 132 GKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSY 191
Query: 232 SLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMA 291
+ +I L ++ ++ ++Y+ + + Q + ++VG K D M L
Sbjct: 192 NGLIHLLLKSRFCTEAM--EVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEM 249
Query: 292 QGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYL 351
+ +GL P T+ I L +G+ EA + + + + G P Y L+ L
Sbjct: 250 ETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKL 309
Query: 352 KDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRI 411
A+ V +M+ PD TY L+D +++ +S + EME P+ ++ +
Sbjct: 310 DCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTIL 369
Query: 412 LAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGI 471
+ G + F L M+ G+ P+ H YN +I + + L A+ F M S G+
Sbjct: 370 VDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGV 429
Query: 472 EPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKR 531
+P T+ ID + K G A E FE+M+ +G P N + L + R + K+
Sbjct: 430 KPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQ 489
Query: 532 LLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSN 591
+ ++ GL+P+ VTY ++ Y + G D+AI+ L M +G +P
Sbjct: 490 IFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSE-----------MMENGCEPDV 538
Query: 592 LALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVPAVYEE 651
+ +NSLIN + R EA+ + MKE LKP VVTY TL+ L + K + ++E
Sbjct: 539 IVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEG 598
Query: 652 MILSGCTPD 660
M+ GC P+
Sbjct: 599 MVQKGCPPN 607
Score = 176 bits (447), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 123/470 (26%), Positives = 216/470 (45%), Gaps = 13/470 (2%)
Query: 191 LTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQ 250
L +YN LI ++ +A+ + +M +G+ YS ++ L + IDS +
Sbjct: 186 LNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDS--VM 243
Query: 251 KLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITAL 310
L KE+E ++ + I +AG ++A L G P TY +I AL
Sbjct: 244 GLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDAL 303
Query: 311 SNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDE 370
+ + A+ VFE++K KP Y LL + L + SEME+ G +PD
Sbjct: 304 CTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDV 363
Query: 371 HTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKE 430
T+++L+DA AG + A L M PN Y+ ++ G ++
Sbjct: 364 VTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGN 423
Query: 431 MKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGR 490
M+S GV+P + Y V ID +GK A+ F++M ++GI P+ + N + K GR
Sbjct: 424 MESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGR 483
Query: 491 YDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT 550
A+++F +++ G P + TYN+M+ + ++ +LL M G P+V+ +
Sbjct: 484 DREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNS 543
Query: 551 LVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEA 610
L++ ++ R D+A + F M+ LKP+ + N+L+ G++ + EA
Sbjct: 544 LINTLYKADRVDEAWK-----------MFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEA 592
Query: 611 FAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVPAVYEEMILSGCTPD 660
+ + M + G P+ +T+ TL L + D+ + +M+ GC PD
Sbjct: 593 IELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPD 642
Score = 166 bits (420), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 132/544 (24%), Positives = 232/544 (42%), Gaps = 88/544 (16%)
Query: 166 YSILIHALGRSEKLYEAFLL--SQRQRLTP---LTYNALISACARNDDLEKALNLMSKMR 220
Y+ L+ LG++ K+ EA L Q+ P +T+N L +ND++ AL ++ KM
Sbjct: 576 YNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMM 635
Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSL--LQKLYKEIECDKIEL--------DGQLLND 270
G D Y+ +I L + ++ ++ ++ K + D + L L+ D
Sbjct: 636 DMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIED 695
Query: 271 ---VIVGFAKAGDASKAMRF-----------LGMAQGVGLSPK----------TATYAAV 306
+I F A F G+ V S + + +
Sbjct: 696 AYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPI 755
Query: 307 ITALSNSGRTIEAEAVFEEL-KESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG 365
I A +FE+ K+ G++P+ YN L+ G ++ ++ A+ V +++ +G
Sbjct: 756 IRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTG 815
Query: 366 VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG----------- 414
+PD TY+ L+DAY +G+ + + KEM + N+ ++ +++G
Sbjct: 816 CIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDAL 875
Query: 415 --YRD-----------------------RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
Y D G Q+ + M G P+ YN++I+
Sbjct: 876 DLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILING 935
Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
FGK A A F RM+ EG+ PD T++ L+DC GR D F+E++E G P
Sbjct: 936 FGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPD 995
Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMR-AQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
YN++IN LG+ R E+ L M+ ++G+ P++ TY +L+ G +
Sbjct: 996 VVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLG-----------I 1044
Query: 569 EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
G+ ++A + ++ GL+P+ N+LI + + A+AV Q M G P+ T
Sbjct: 1045 AGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGT 1104
Query: 629 YTTL 632
Y L
Sbjct: 1105 YEQL 1108
Score = 165 bits (417), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 125/483 (25%), Positives = 225/483 (46%), Gaps = 29/483 (6%)
Query: 166 YSILIHALGRSEKLYEAF-LLSQRQRL----TPLTYNALISACARNDDLEKALNLMSKMR 220
YS L+ LG+ + LL + + L T+ I R + +A ++ +M
Sbjct: 226 YSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMD 285
Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
+G D + Y+++I +L K+D + ++++++++ + + D ++ F+ D
Sbjct: 286 DEGCGPDVVTYTVLIDALCTARKLDCA--KEVFEKMKTGRHKPDRVTYITLLDRFSDNRD 343
Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
+F + G P T+ ++ AL +G EA + +++ G+ P YN
Sbjct: 344 LDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNT 403
Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
L+ G +++ L DA + ME GV P +TY + ID Y +G SA ++M+
Sbjct: 404 LICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKG 463
Query: 401 AKPN-----SFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNC 455
PN + +YS AG RDR E ++ F LK++ G+ PD+ YN+M+ + K
Sbjct: 464 IAPNIVACNASLYSLAKAG-RDR-EAKQIFYGLKDI---GLVPDSVTYNMMMKCYSKVGE 518
Query: 456 LHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNI 515
+ A+ M+ G EPD I N+LI+ +K R D A ++F M+E P TYN
Sbjct: 519 IDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNT 578
Query: 516 MINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQA 575
++ LG+ + ++ L M +G PN +T+ TL D ++ A++ L
Sbjct: 579 LLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKML------- 631
Query: 576 VNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
F++M G P N++I ++ + EA MK+ + PD VT TL+
Sbjct: 632 ---FKMMDM-GCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPG 686
Query: 636 LIR 638
+++
Sbjct: 687 VVK 689
Score = 155 bits (393), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 113/403 (28%), Positives = 187/403 (46%), Gaps = 12/403 (2%)
Query: 125 PAPL-WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYE------LLYSILIHALGRSE 177
PA L W L+ ++ + + ID A + L + +C + + YS + + +
Sbjct: 711 PANLFWEDLIGSILAE-AGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGAR 769
Query: 178 KLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQS 237
L+E F + TYN LI D +E A ++ +++ G D Y+ ++ +
Sbjct: 770 TLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDA 829
Query: 238 LTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMR-FLGMAQGVGL 296
++ KID L +LYKE+ + E + N VI G KAG+ A+ + +
Sbjct: 830 YGKSGKIDE--LFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDF 887
Query: 297 SPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEF 356
SP TY +I LS SGR EA+ +FE + + G +P YN L+ G+ K G A
Sbjct: 888 SPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACA 947
Query: 357 VVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYR 416
+ M + GV PD TYS+L+D GR + KE++ S P+ Y+ I+ G
Sbjct: 948 LFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLG 1007
Query: 417 DRGEWQRTFQVLKEMKSS-GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDT 475
+ + EMK+S G+ PD + YN +I G + A ++ + G+EP+
Sbjct: 1008 KSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNV 1067
Query: 476 ITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
T+N LI + G+ + A +++ M G+ P T TY + N
Sbjct: 1068 FTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1110
Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 107/433 (24%), Positives = 187/433 (43%), Gaps = 59/433 (13%)
Query: 287 FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYV 346
F +A + L T T ++ AL G+ E VF+ +++ +K T Y + K
Sbjct: 105 FKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLS 164
Query: 347 KMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSF 406
G LK A + + +M G + + ++Y+ LI + A V + M + +P+
Sbjct: 165 VKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQ 224
Query: 407 IYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
YS ++ G R + +LKEM++ G++P+ + + + I G+ ++ A RM
Sbjct: 225 TYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRM 284
Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERW 526
EG PD +T+ LID + D A+E+FE+M+ + P TY +++ +
Sbjct: 285 DDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDL 344
Query: 527 EDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV---------- 576
+ VK+ M G +P+VVT+T LVD ++G F +A + L+ + DQ +
Sbjct: 345 DSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTL 404
Query: 577 --NAFRVMRTD-----------------------------------------------GL 587
RV R D G+
Sbjct: 405 ICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGI 464
Query: 588 KPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVPA 647
P+ +A N+ + + + RD EA + +K+ GL PD VTY +MK +V + +
Sbjct: 465 APNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIK 524
Query: 648 VYEEMILSGCTPD 660
+ EM+ +GC PD
Sbjct: 525 LLSEMMENGCEPD 537
Score = 139 bits (351), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 124/547 (22%), Positives = 243/547 (44%), Gaps = 25/547 (4%)
Query: 124 VPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA- 182
VP + ++++ S ID A ++S + + N C ++ + LI+ L +++++ EA
Sbjct: 500 VPDSVTYNMMMKCYSKVGEIDEAIKLLSEMME-NGCEPDVIVVNSLINTLYKADRVDEAW 558
Query: 183 --FLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSL 238
F+ + +L P +TYN L++ +N +++A+ L M Q G + I ++ + L
Sbjct: 559 KMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCL 618
Query: 239 TRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSP 298
+ +++ +L + L+K ++ + D N +I G K G +AM F + + + P
Sbjct: 619 CKNDEVTLAL-KMLFKMMDMGCVP-DVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYP 675
Query: 299 KTATYAAVITALSNSGRTIEAEAVFEE-LKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
T ++ + + +A + L +P + L+ + + +A
Sbjct: 676 DFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSF 735
Query: 358 VSEMERSGVLPDEHTYSLLIDAYA-NAGRWESARIVLKEMEVS-HAKPNSFIYSRILAGY 415
+ +G+ D + + I Y+ AR + ++ +P Y+ ++ G
Sbjct: 736 SERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGL 795
Query: 416 RDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDT 475
+ + V ++KS+G PD YN ++D +GK + + M + E +T
Sbjct: 796 LEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANT 855
Query: 476 ITWNTLIDCHFKCGRYDRAEELFEE-MQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
IT N +I K G D A +L+ + M +R + P TY +I+ L + R + K+L
Sbjct: 856 ITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFE 915
Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLAL 594
M G PN Y L++ +G++G +D A F+ M +G++P
Sbjct: 916 GMLDYGCRPNCAIYNILINGFGKAGE-----------ADAACALFKRMVKEGVRPDLKTY 964
Query: 595 NSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVPAVYEEMIL 654
+ L++ R E + +KE+GL PDVV Y ++ L + + + ++ EM
Sbjct: 965 SVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKT 1024
Query: 655 S-GCTPD 660
S G TPD
Sbjct: 1025 SRGITPD 1031
Score = 115 bits (289), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 97/368 (26%), Positives = 174/368 (47%), Gaps = 22/368 (5%)
Query: 84 FTPLLNFLSENSNSESASALASSPSSLNRVEFKLAESYRAVPAPLWHSLLKNLCSSNSSI 143
P++ + +++N A L + V+ KL P ++ L+ L ++ I
Sbjct: 752 LVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKL---------PTYNLLIGGLLEADM-I 801
Query: 144 DLAYAVVSWLQ-KHNLCYSYELLYSILIHALGRSEKLYEAFLL-----SQRQRLTPLTYN 197
++A V +LQ K C Y+ L+ A G+S K+ E F L + +T+N
Sbjct: 802 EIAQDV--FLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHN 859
Query: 198 ALISACARNDDLEKALNLMSKMRQD-GYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEI 256
+IS + +++ AL+L + D + Y +I L+++ ++ + ++L++ +
Sbjct: 860 IVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEA--KQLFEGM 917
Query: 257 ECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRT 316
+ + N +I GF KAG+A A G+ P TY+ ++ L GR
Sbjct: 918 LDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRV 977
Query: 317 IEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERS-GVLPDEHTYSL 375
E F+ELKESGL P YN ++ G K L++A + +EM+ S G+ PD +TY+
Sbjct: 978 DEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNS 1037
Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
LI AG E A + E++ + +PN F ++ ++ GY G+ + + V + M + G
Sbjct: 1038 LILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGG 1097
Query: 436 VEPDTHFY 443
P+T Y
Sbjct: 1098 FSPNTGTY 1105
Score = 84.0 bits (206), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 110/261 (42%), Gaps = 11/261 (4%)
Query: 411 ILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG 470
+L R G+ + V M+ ++ DT+ Y + + L A A +M G
Sbjct: 124 MLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFG 183
Query: 471 IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVK 530
+ ++N LI K A E++ M G+ P TY+ ++ LG++ + V
Sbjct: 184 FVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVM 243
Query: 531 RLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPS 590
LL M GL PNV T+T + + G++G+ ++A E L+ + D+ G P
Sbjct: 244 GLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDE-----------GCGPD 292
Query: 591 NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVPAVYE 650
+ LI+A ++ A V + MK KPD VTY TL+ V +
Sbjct: 293 VVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWS 352
Query: 651 EMILSGCTPDRKARAMLRSAL 671
EM G PD +L AL
Sbjct: 353 EMEKDGHVPDVVTFTILVDAL 373
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 94/222 (42%), Gaps = 11/222 (4%)
Query: 440 THFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFE 499
T N M++ L FD M I+ DT T+ T+ G +A
Sbjct: 118 TETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALR 177
Query: 500 EMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSG 559
+M+E G+ +YN +I+LL + + + M +G P++ TY++L + G
Sbjct: 178 KMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSL--MVGLGK 235
Query: 560 RFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKE 619
R D D + + M T GLKP+ I G + EA+ +L+ M +
Sbjct: 236 RRD---------IDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDD 286
Query: 620 NGLKPDVVTYTTLMKALIRVDKFHKVPAVYEEMILSGCTPDR 661
G PDVVTYT L+ AL K V+E+M PDR
Sbjct: 287 EGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDR 328
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 89/197 (45%), Gaps = 11/197 (5%)
Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
T T N +++ G+ + +F+ MQ+R T TY + L + + L
Sbjct: 118 TETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALR 177
Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLAL 594
MR G + N +Y L+ + +S RF C E A+ +R M +G +PS
Sbjct: 178 KMREFGFVLNAYSYNGLIHLLLKS-RF-----CTE-----AMEVYRRMILEGFRPSLQTY 226
Query: 595 NSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVPAVYEEMIL 654
+SL+ G+ + +L+ M+ GLKP+V T+T ++ L R K ++ + + M
Sbjct: 227 SSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDD 286
Query: 655 SGCTPDRKARAMLRSAL 671
GC PD +L AL
Sbjct: 287 EGCGPDVVTYTVLIDAL 303
>sp|Q9SFV9|PP218_ARATH Pentatricopeptide repeat-containing protein At3g07290,
mitochondrial OS=Arabidopsis thaliana GN=At3g07290 PE=2
SV=1
Length = 880
Score = 181 bits (460), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 129/474 (27%), Positives = 225/474 (47%), Gaps = 18/474 (3%)
Query: 190 RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSS-- 247
RL Y++L+ + A+ D A +M DG+ I+Y ++ +L + +++
Sbjct: 157 RLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEM 216
Query: 248 LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMR-FLGMAQGVGLSPKTATYAAV 306
+ K+ K LD + +++GF + + A++ F M++ V +P + +Y+ +
Sbjct: 217 FMSKILK----IGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSIL 272
Query: 307 ITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV 366
I L GR EA + +++ E G +P T+ Y L+K G + A + EM G
Sbjct: 273 IHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGC 332
Query: 367 LPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQ 426
P+ HTY++LID G+ E A V ++M P+ Y+ ++ GY G F+
Sbjct: 333 KPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFE 392
Query: 427 VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
+L M+ +P+ +N +++ + + A+ RML G+ PD +++N LID
Sbjct: 393 LLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLC 452
Query: 487 KCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVV 546
+ G + A +L M P T+ +IN +Q + + LG M +G+ + V
Sbjct: 453 REGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEV 512
Query: 547 TYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQR 606
T TTL+D + G+ DA+ LE L R++ T P +LN +++ + +
Sbjct: 513 TGTTLIDGVCKVGKTRDALFILETLV-----KMRILTT----PH--SLNVILDMLSKGCK 561
Query: 607 DAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVPAVYEEMILSGCTPD 660
E A+L + + GL P VVTYTTL+ LIR + E M LSGC P+
Sbjct: 562 VKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPN 615
Score = 164 bits (414), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 139/533 (26%), Positives = 232/533 (43%), Gaps = 56/533 (10%)
Query: 166 YSILIHALGRSEKLYEAFLLSQRQR-----LTPLTYNALISACARNDDLEKALNLMSKMR 220
YS L+ +L + + + A++ +R + + Y +++A +N E A MSK+
Sbjct: 163 YSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKIL 222
Query: 221 QDGYHCD-FINYSLVIQSLTRTNKIDS-SLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
+ G+ D I SL++ N D+ + + KE+ C + +L I G +
Sbjct: 223 KIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSIL---IHGLCEV 279
Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
G +A G P T TY +I AL + G +A +F+E+ G KP Y
Sbjct: 280 GRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTY 339
Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
L+ G + G +++A V +M + + P TY+ LI+ Y GR A +L ME
Sbjct: 340 TVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEK 399
Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTF---GKYNC 455
KPN ++ ++ G G+ + +LK M +G+ PD YNV+ID G N
Sbjct: 400 RACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNT 459
Query: 456 ---LHHAMAAFD-----------------------------RMLSEGIEPDTITWNTLID 483
L +M FD ML +GI D +T TLID
Sbjct: 460 AYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLID 519
Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
K G+ A + E + + + N+++++L + + ++ +LG + GL+P
Sbjct: 520 GVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVP 579
Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
+VVTYTTLVD +SG + LE +M+ G P+ +IN +
Sbjct: 580 SVVTYTTLVDGLIRSGDITGSFRILE-----------LMKLSGCLPNVYPYTIIINGLCQ 628
Query: 604 DQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVPAVYEEMILSG 656
R EA +L M+++G+ P+ VTYT ++K + K + M+ G
Sbjct: 629 FGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERG 681
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 125/500 (25%), Positives = 224/500 (44%), Gaps = 22/500 (4%)
Query: 83 DFTPLLNFLSENSNSESASALASSPSSLNRVEFKLAESYRAVPAPLWHSLLKNLCSSNSS 142
D+ ++N L +N +E+A S K+ + + + + SLL C +
Sbjct: 197 DYRTIVNALCKNGYTEAAEMFMS----------KILKIGFVLDSHIGTSLLLGFCRGLNL 246
Query: 143 IDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQ-----RLTPLTYN 197
D A V + K C + YSILIH L +L EAF L + + + TY
Sbjct: 247 RD-ALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYT 305
Query: 198 ALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKID--SSLLQKLYKE 255
LI A ++KA NL +M G + Y+++I L R KI+ + + +K+ K
Sbjct: 306 VLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVK- 364
Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
D+I N +I G+ K G A L + + P T+ ++ L G+
Sbjct: 365 ---DRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGK 421
Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
+A + + + ++GL P +YN L+ G + G++ A ++S M + PD T++
Sbjct: 422 PYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTA 481
Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
+I+A+ G+ + A L M + + ++ G G+ + +L+ +
Sbjct: 482 IINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMR 541
Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
+ H NV++D K + +A ++ G+ P +T+ TL+D + G +
Sbjct: 542 ILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSF 601
Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
+ E M+ G P Y I+IN L + R E+ ++LL M+ G+ PN VTYT +V Y
Sbjct: 602 RILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGY 661
Query: 556 GQSGRFDDAIECLEGLSDQA 575
+G+ D A+E + + ++
Sbjct: 662 VNNGKLDRALETVRAMVERG 681
Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/389 (23%), Positives = 171/389 (43%), Gaps = 21/389 (5%)
Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
+ L+K LC ID A+ + + C Y++LI L R K+ EA + ++
Sbjct: 304 YTVLIKALCD-RGLIDKAFNLFDEMIPRG-CKPNVHTYTVLIDGLCRDGKIEEANGVCRK 361
Query: 189 Q---RLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
R+ P +TYNALI+ ++ + A L++ M + + ++ +++ L R K
Sbjct: 362 MVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGK 421
Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDV------IVGFAKAGDASKAMRFLGMAQGVGLS 297
YK + K LD L D+ I G + G + A + L +
Sbjct: 422 P--------YKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIE 473
Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
P T+ A+I A G+ A A + G+ L+ G K+G +DA F+
Sbjct: 474 PDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFI 533
Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
+ + + +L H+ ++++D + + + +L ++ P+ Y+ ++ G
Sbjct: 534 LETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIR 593
Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTIT 477
G+ +F++L+ MK SG P+ + Y ++I+ ++ + A M G+ P+ +T
Sbjct: 594 SGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVT 653
Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQERGY 506
+ ++ + G+ DRA E M ERGY
Sbjct: 654 YTVMVKGYVNNGKLDRALETVRAMVERGY 682
Score = 112 bits (279), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 165/359 (45%), Gaps = 9/359 (2%)
Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL---GRSEKLYEAFLL 185
+ L+ LC + I+ A V + K + + + Y+ LI+ GR +E +
Sbjct: 339 YTVLIDGLCR-DGKIEEANGVCRKMVKDRI-FPSVITYNALINGYCKDGRVVPAFELLTV 396
Query: 186 SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
+++ P T+N L+ R KA++L+ +M +G D ++Y+++I L R
Sbjct: 397 MEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGH 456
Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
++++ KL + C IE D +I F K G A A FLG+ G+S T
Sbjct: 457 MNTA--YKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTG 514
Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
+I + G+T +A + E L + + + N +L K +K+ ++ ++ +
Sbjct: 515 TTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINK 574
Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
G++P TY+ L+D +G + +L+ M++S PN + Y+ I+ G G +
Sbjct: 575 LGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEE 634
Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
++L M+ SGV P+ Y VM+ + L A+ M+ G E + +++L+
Sbjct: 635 AEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLL 693
Score = 93.2 bits (230), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 143/332 (43%), Gaps = 39/332 (11%)
Query: 122 RAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYE 181
R P+ + ++ L N + + A+ +++ ++K C ++ L+ L R K Y+
Sbjct: 366 RIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRA-CKPNVRTFNELMEGLCRVGKPYK 424
Query: 182 AFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQ 236
A L +R L+P ++YN LI R + A L+S M D + ++ +I
Sbjct: 425 AVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIIN 484
Query: 237 SLTRTNKIDSS---LLQKLYKEIECDKIE----LDGQL---------------------- 267
+ + K D + L L K I D++ +DG
Sbjct: 485 AFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILT 544
Query: 268 ----LNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVF 323
LN ++ +K + + LG +GL P TY ++ L SG + +
Sbjct: 545 TPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRIL 604
Query: 324 EELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANA 383
E +K SG P Y ++ G + G +++AE ++S M+ SGV P+ TY++++ Y N
Sbjct: 605 ELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNN 664
Query: 384 GRWESARIVLKEMEVSHAKPNSFIYSRILAGY 415
G+ + A ++ M + N IYS +L G+
Sbjct: 665 GKLDRALETVRAMVERGYELNDRIYSSLLQGF 696
Score = 56.2 bits (134), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 101/232 (43%), Gaps = 18/232 (7%)
Query: 125 PAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF- 183
P L + + N D+A A + + + + E+ + LI + + K +A
Sbjct: 474 PDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLD-EVTGTTLIDGVCKVGKTRDALF 532
Query: 184 ----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT 239
L+ R TP + N ++ ++ +++ L ++ K+ + G + Y+ ++ L
Sbjct: 533 ILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLI 592
Query: 240 RTNKIDSSLLQKLYKEIECDKIELDGQLLN-----DVIVGFAKAGDASKAMRFLGMAQGV 294
R+ I S ++ +E ++L G L N +I G + G +A + L Q
Sbjct: 593 RSGDITGS-----FRILE--LMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDS 645
Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYV 346
G+SP TY ++ N+G+ A + E G + + Y++LL+G+V
Sbjct: 646 GVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFV 697
Score = 35.8 bits (81), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 65/139 (46%), Gaps = 16/139 (11%)
Query: 536 MRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALN 595
M A G + ++ Y T+V+ ++G + +A E ++++ + S++
Sbjct: 186 MEADGFVVGMIDYRTIVNALCKNG-YTEAAEMFMS---------KILKIGFVLDSHIG-T 234
Query: 596 SLINAF--GEDQRDA-EAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVPAVYEEM 652
SL+ F G + RDA + F V+ KE P+ V+Y+ L+ L V + + + ++M
Sbjct: 235 SLLLGFCRGLNLRDALKVFDVMS--KEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQM 292
Query: 653 ILSGCTPDRKARAMLRSAL 671
GC P + +L AL
Sbjct: 293 GEKGCQPSTRTYTVLIKAL 311
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 181 bits (459), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 127/502 (25%), Positives = 228/502 (45%), Gaps = 31/502 (6%)
Query: 166 YSILIHALGRSEKLYEAFLLSQR-QRLTPL----TYNALISACARNDDLEKALNLMSKMR 220
++ L+ A+ + +K L ++ QRL + TYN LI+ R + AL L+ KM
Sbjct: 88 FNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMM 147
Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
+ GY + S ++ +I ++ L ++ D +I G
Sbjct: 148 KLGYEPSIVTLSSLLNGYCHGKRISDAV--ALVDQMVEMGYRPDTITFTTLIHGLFLHNK 205
Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
AS+A+ + G P TY V+ L G T A + +++ + ++ +N
Sbjct: 206 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNT 265
Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
++ K ++ DA + EME G+ P+ TYS LI + GRW A +L +M
Sbjct: 266 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 325
Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
PN ++ ++ + G++ ++ +M ++PD YN +++ F ++ L A
Sbjct: 326 INPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAK 385
Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
F+ M+S+ PD +T+NTLI K R + ELF EM RG T TY +I L
Sbjct: 386 QMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 445
Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE-------------- 566
++ +++ M + G+ P+++TY+ L+D +G+ + A+E
Sbjct: 446 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 505
Query: 567 ----------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQY 616
C G D + F + G+KP+ + N++I+ + EA+A+L+
Sbjct: 506 YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKK 565
Query: 617 MKENGLKPDVVTYTTLMKALIR 638
MKE+G P+ TY TL++A +R
Sbjct: 566 MKEDGPLPNSGTYNTLIRAHLR 587
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 124/479 (25%), Positives = 222/479 (46%), Gaps = 17/479 (3%)
Query: 184 LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
++ R + + +N L+SA A+ + ++L KM++ Y+++I R ++
Sbjct: 76 MVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQ 135
Query: 244 IDSSL--LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTA 301
I +L L K+ K I LLN G+ S A+ + +G P T
Sbjct: 136 ISLALALLGKMMKLGYEPSIVTLSSLLN----GYCHGKRISDAVALVDQMVEMGYRPDTI 191
Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
T+ +I L + EA A+ + + + G +P Y ++ G K G A ++++M
Sbjct: 192 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKM 251
Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
E + + D ++ +ID+ + A + KEME +PN YS +++ G W
Sbjct: 252 EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRW 311
Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
Q+L +M + P+ +N +ID F K A +D M+ I+PD T+N+L
Sbjct: 312 SDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSL 371
Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
++ R D+A+++FE M + FP TYN +I + +R ED L M +GL
Sbjct: 372 VNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGL 431
Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
+ + VTYTTL+ G F D G D A F+ M +DG+ P + + L++
Sbjct: 432 VGDTVTYTTLI-----QGLFHD------GDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 480
Query: 602 GEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVPAVYEEMILSGCTPD 660
+ + +A V YM+++ +K D+ YTT+++ + + K ++ + L G P+
Sbjct: 481 CNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPN 539
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 121/495 (24%), Positives = 231/495 (46%), Gaps = 21/495 (4%)
Query: 130 HSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELL-YSILIHALGRSEKLYEAFLLSQR 188
+++L N S I LA A++ + K L Y ++ S L++ +++ +A L +
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMK--LGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 180
Query: 189 Q-----RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
R +T+ LI ++ +A+ L+ +M Q G + + Y +V+ L +
Sbjct: 181 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG- 239
Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
D+ L L ++E KIE D + N +I K A+ + G+ P TY
Sbjct: 240 -DTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 298
Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
+++I+ L + GR +A + ++ E + P +NAL+ +VK G +AE + +M +
Sbjct: 299 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIK 358
Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
+ PD TY+ L++ + R + A+ + + M P+ Y+ ++ G+ +
Sbjct: 359 RSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVED 418
Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
++ +EM G+ DT Y +I +A F +M+S+G+ PD +T++ L+D
Sbjct: 419 GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLD 478
Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
G+ ++A E+F+ MQ+ Y MI + + + +D L ++ +G+ P
Sbjct: 479 GLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKP 538
Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
NVVTY T++ SG C + L +A + M+ DG P++ N+LI A
Sbjct: 539 NVVTYNTMI-----SGL------CSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLR 587
Query: 604 DQRDAEAFAVLQYMK 618
D A + +++ M+
Sbjct: 588 DGDKAASAELIREMR 602
Score = 139 bits (350), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 97/409 (23%), Positives = 182/409 (44%), Gaps = 25/409 (6%)
Query: 287 FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYV 346
F GM + L P + +++A++ + ++ E+++ + YN L+ +
Sbjct: 73 FGGMVKSRPL-PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFC 131
Query: 347 KMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSF 406
+ + A ++ +M + G P T S L++ Y + R A ++ +M +P++
Sbjct: 132 RRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTI 191
Query: 407 IYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
++ ++ G + ++ M G +P+ Y V+++ K A+ ++M
Sbjct: 192 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKM 251
Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERW 526
+ IE D + +NT+ID K D A LF+EM+ +G P TY+ +I+ L RW
Sbjct: 252 EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRW 311
Query: 527 EDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF-------DDAIE------------- 566
D +LL +M + + PN+VT+ L+D + + G+F DD I+
Sbjct: 312 SDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSL 371
Query: 567 ----CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGL 622
C+ D+A F M + P + N+LI F + +R + + + M GL
Sbjct: 372 VNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGL 431
Query: 623 KPDVVTYTTLMKALIRVDKFHKVPAVYEEMILSGCTPDRKARAMLRSAL 671
D VTYTTL++ L V+++M+ G PD ++L L
Sbjct: 432 VGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 480
Score = 130 bits (326), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 173/384 (45%), Gaps = 18/384 (4%)
Query: 281 ASKAMRFLGMAQ-GVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
A ++ GM G S + Y ++ + + +A +F + +S P +N
Sbjct: 30 APSSIDLCGMCYWGRAFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFN 89
Query: 340 ALLKGYVKMGYLKDAEFVVS---EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM 396
LL KM K + V+S +M+R ++ +TY++LI+ + + A +L +M
Sbjct: 90 KLLSAIAKM---KKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKM 146
Query: 397 EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
+P+ S +L GY ++ +M G PDT + +I +N
Sbjct: 147 MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKA 206
Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
A+A DRM+ G +P+ +T+ +++ K G D A L +M+ +N +
Sbjct: 207 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTI 266
Query: 517 INLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
I+ L + +D L M +G+ PNVVTY++L+ GR+ DA + L + ++ +
Sbjct: 267 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 326
Query: 577 NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
N P+ + N+LI+AF ++ + EA + M + + PD+ TY +L+
Sbjct: 327 N-----------PNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGF 375
Query: 637 IRVDKFHKVPAVYEEMILSGCTPD 660
D+ K ++E M+ C PD
Sbjct: 376 CMHDRLDKAKQMFEFMVSKDCFPD 399
Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 161/362 (44%), Gaps = 7/362 (1%)
Query: 164 LLYSILIHALGRSEKLYEAFLL-----SQRQRLTPLTYNALISACARNDDLEKALNLMSK 218
++++ +I +L + + +A L ++ R +TY++LIS A L+S
Sbjct: 261 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 320
Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
M + + + + ++ +I + + K + +KLY ++ I+ D N ++ GF
Sbjct: 321 MIEKKINPNLVTFNALIDAFVKEGKFVEA--EKLYDDMIKRSIDPDIFTYNSLVNGFCMH 378
Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
KA + P TY +I S R + +F E+ GL T Y
Sbjct: 379 DRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 438
Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
L++G G +A+ V +M GV PD TYS+L+D N G+ E A V M+
Sbjct: 439 TTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 498
Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
S K + +IY+ ++ G G+ + + + GV+P+ YN MI L
Sbjct: 499 SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQE 558
Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
A A +M +G P++ T+NTLI H + G + EL EM+ + +T ++ N
Sbjct: 559 AYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVAN 618
Query: 519 LL 520
+L
Sbjct: 619 ML 620
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 181 bits (458), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 124/511 (24%), Positives = 230/511 (45%), Gaps = 41/511 (8%)
Query: 187 QRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS 246
+R L ++N LI L +L+ K+ + G+ D + ++ ++ L ++I
Sbjct: 135 RRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISE 194
Query: 247 SL--LQKLYKEIECDKIELDGQLL-----------NDVIVGFAKAGDASKAMRFLGMAQG 293
+L + + + + L Q++ N +I G G +A + G
Sbjct: 195 ALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVG 254
Query: 294 VGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKD 353
GL TY ++ + G T A + +++E+ +KP Y+A++ K G+ D
Sbjct: 255 KGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSD 314
Query: 354 AEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA 413
A+++ SEM G+ P+ TY+ +ID + + GRW A+ +L++M P+ ++ +++
Sbjct: 315 AQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALIS 374
Query: 414 GYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
G+ ++ EM + PDT YN MI F K+N A FD M S P
Sbjct: 375 ASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----P 430
Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
D +T+NT+ID + + R D +L E+ RG TTTYN +I+ E + + L
Sbjct: 431 DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLF 490
Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS--------------------- 572
M + G+ P+ +T L+ + ++ + ++A+E E +
Sbjct: 491 QEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKG 550
Query: 573 ---DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
D+A + F + G++P N +I+ F ++A + MK+NG +PD TY
Sbjct: 551 SKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTY 610
Query: 630 TTLMKALIRVDKFHKVPAVYEEMILSGCTPD 660
TL++ ++ + K + EM +G + D
Sbjct: 611 NTLIRGCLKAGEIDKSIELISEMRSNGFSGD 641
Score = 177 bits (448), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 122/482 (25%), Positives = 216/482 (44%), Gaps = 45/482 (9%)
Query: 229 INYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFL 288
++ + VI R N+ D ++ LY+++E +I L+ N +I F S ++
Sbjct: 107 VDCNKVIGVFVRMNRPDVAI--SLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTF 164
Query: 289 GMAQGVGLSPKTATYAAVITALSNSGRT---------------IEAEAVFEELKESGLKP 333
G +G P T+ ++ L R +EA A+F+++ E GL P
Sbjct: 165 GKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTP 224
Query: 334 RTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVL 393
+N L+ G G + +A +V++M G+ D TY +++ G +SA +L
Sbjct: 225 VVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLL 284
Query: 394 KEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKY 453
+ME +H KP+ IYS I+ G + EM G+ P+ YN MID F +
Sbjct: 285 SKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSF 344
Query: 454 NCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTY 513
A M+ I PD +T+N LI K G+ AE+L +EM R FP T TY
Sbjct: 345 GRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTY 404
Query: 514 NIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSD 573
N MI + R++D K + M + P+VVT+ T++D+Y ++ R D+ ++ L +S
Sbjct: 405 NSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISR 460
Query: 574 QAVNA------------------------FRVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
+ + A F+ M + G+ P + N L+ F E+++ E
Sbjct: 461 RGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEE 520
Query: 610 AFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVPAVYEEMILSGCTPDRKARAMLRS 669
A + + ++ + + D V Y ++ + + K + ++ + + G PD + ++ S
Sbjct: 521 ALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMIS 580
Query: 670 AL 671
Sbjct: 581 GF 582
Score = 155 bits (393), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 134/545 (24%), Positives = 245/545 (44%), Gaps = 45/545 (8%)
Query: 122 RAVPAPLW--HSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELL-YSILIHALGRSEK 178
R +P ++ + L+K C + L++++ ++ + L + +++ ++ L+H L ++
Sbjct: 135 RRIPLNIYSFNILIKCFCDCHK---LSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDR 191
Query: 179 LYEAF----------------LLSQRQR--LTP--LTYNALISACARNDDLEKALNLMSK 218
+ EA L Q LTP +T+N LI+ + +A L++K
Sbjct: 192 ISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNK 251
Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
M G H D + Y ++ + + S+L L ++E I+ D + + +I K
Sbjct: 252 MVGKGLHIDVVTYGTIVNGMCKMGDTKSAL--NLLSKMEETHIKPDVVIYSAIIDRLCKD 309
Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
G S A G++P TY +I + GR +A+ + ++ E + P +
Sbjct: 310 GHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTF 369
Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
NAL+ VK G L +AE + EM + PD TY+ +I + R++ A+ + M
Sbjct: 370 NALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM-- 427
Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
A P+ ++ I+ Y Q+L+E+ G+ +T YN +I F + + L+
Sbjct: 428 --ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNA 485
Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
A F M+S G+ PDTIT N L+ + + + A ELFE +Q T YNI+I+
Sbjct: 486 AQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIH 545
Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
+ + + ++ L ++ G+ P+V TY + I G G+ +SD V
Sbjct: 546 GMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVM--ISGFCGK--------SAISDANV-L 594
Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI- 637
F M+ +G +P N N+LI + ++ ++ M+ NG D T + +
Sbjct: 595 FHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVADLITD 654
Query: 638 -RVDK 641
R+DK
Sbjct: 655 GRLDK 659
Score = 36.2 bits (82), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 61/128 (47%), Gaps = 9/128 (7%)
Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
++ ++ +C S +D A+ + L H + + Y+++I + +A +L +
Sbjct: 540 YNIIIHGMCKG-SKVDEAWDLFCSLPIHGVEPDVQT-YNVMISGFCGKSAISDANVLFHK 597
Query: 189 QRLTPL-----TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT--RT 241
+ TYN LI C + +++K++ L+S+MR +G+ D +V +T R
Sbjct: 598 MKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVADLITDGRL 657
Query: 242 NKIDSSLL 249
+K S +L
Sbjct: 658 DKSFSDML 665
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 181 bits (458), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 117/452 (25%), Positives = 211/452 (46%), Gaps = 16/452 (3%)
Query: 208 DLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQL 267
+LE+ ++L KM Q +++S V+ + ++ D L+ L+ +E I D
Sbjct: 49 NLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYD--LVISLFHHMEVCGIGHDLYS 106
Query: 268 LNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELK 327
N VI + A+ +G G P T +++I R +A + +++
Sbjct: 107 YNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKME 166
Query: 328 ESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWE 387
E G +P YN ++ G K+G + DA + MER GV D TY+ L+ +GRW
Sbjct: 167 EMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWS 226
Query: 388 SARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMI 447
A ++++M + PN ++ ++ + G++ ++ +EM V+PD YN +I
Sbjct: 227 DAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLI 286
Query: 448 DTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYF 507
+ + + A D M+++G PD +T+NTLI+ K R D +LF EM +RG
Sbjct: 287 NGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLV 346
Query: 508 PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIEC 567
T TYN +I + R + + + M ++ PN+ TY+ L +YG C
Sbjct: 347 GDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSIL--LYGL---------C 392
Query: 568 LEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVV 627
+ ++A+ F M+ ++ N +I+ + +A+ + + + GLKPDVV
Sbjct: 393 MNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVV 452
Query: 628 TYTTLMKALIRVDKFHKVPAVYEEMILSGCTP 659
+YTT++ R ++ K +Y +M G P
Sbjct: 453 SYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 146 bits (368), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 105/430 (24%), Positives = 184/430 (42%), Gaps = 51/430 (11%)
Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
+YN +I+ R AL+++ KM + GY D + S +I
Sbjct: 106 SYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLIN------------------ 147
Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
GF + A+ + + +G P Y +I G
Sbjct: 148 -------------------GFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIG 188
Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
+A +F+ ++ G++ YN+L+ G G DA ++ +M ++P+ T++
Sbjct: 189 LVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFT 248
Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
+ID + G++ A + +EM P+ F Y+ ++ G G Q+L M +
Sbjct: 249 AVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTK 308
Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
G PD YN +I+ F K + F M G+ DTIT+NT+I +F+ GR D A
Sbjct: 309 GCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAA 368
Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
+E+F M R P TY+I++ L R E L NM+ + ++ TY + I
Sbjct: 369 QEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIV--I 423
Query: 555 YGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
+G C G + A + FR + GLKP ++ ++I+ F ++ ++ +
Sbjct: 424 HGM---------CKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLY 474
Query: 615 QYMKENGLKP 624
+ M+E+GL P
Sbjct: 475 RKMQEDGLLP 484
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 177/390 (45%), Gaps = 14/390 (3%)
Query: 271 VIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESG 330
V+ AK+ + + + G+ +Y VI L R + A +V ++ + G
Sbjct: 75 VLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFG 134
Query: 331 LKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESAR 390
+P ++L+ G+ + + DA +VS+ME G PD Y+ +ID G A
Sbjct: 135 YEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAV 194
Query: 391 IVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTF 450
+ ME + ++ Y+ ++AG G W +++++M + P+ + +ID F
Sbjct: 195 ELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVF 254
Query: 451 GKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCT 510
K AM ++ M ++PD T+N+LI+ GR D A+++ + M +G P
Sbjct: 255 VKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDV 314
Query: 511 TTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEG 570
TYN +IN + +R ++ +L M +GL+ + +TY T++ Y Q+GR D A E
Sbjct: 315 VTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFS- 373
Query: 571 LSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYT 630
R D +P+ + L+ + R +A + + M+++ ++ D+ TY
Sbjct: 374 ------------RMDS-RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYN 420
Query: 631 TLMKALIRVDKFHKVPAVYEEMILSGCTPD 660
++ + ++ ++ + G PD
Sbjct: 421 IVIHGMCKIGNVEDAWDLFRSLSCKGLKPD 450
Score = 127 bits (318), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 140/301 (46%), Gaps = 11/301 (3%)
Query: 360 EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG 419
+M +S LP +S ++ A + ++ + MEV + + Y+ ++
Sbjct: 59 KMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCS 118
Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWN 479
+ V+ +M G EPD + +I+ F + N + A+ +M G PD + +N
Sbjct: 119 RFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYN 178
Query: 480 TLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
T+ID K G + A ELF+ M+ G TYN ++ L RW D RL+ +M +
Sbjct: 179 TIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMR 238
Query: 540 GLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLIN 599
++PNV+T+T ++D++ + G+F +A++ E ++ + V+ P NSLIN
Sbjct: 239 DIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVD-----------PDVFTYNSLIN 287
Query: 600 AFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVPAVYEEMILSGCTP 659
R EA +L M G PDVVTY TL+ + + + ++ EM G
Sbjct: 288 GLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVG 347
Query: 660 D 660
D
Sbjct: 348 D 348
Score = 99.4 bits (246), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 148/348 (42%), Gaps = 12/348 (3%)
Query: 131 SLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHA---LGRSEKLYEAFLLSQ 187
SL+ C N D A +VS +++ ++Y+ +I +G E F +
Sbjct: 144 SLINGFCQGNRVFD-AIDLVSKMEEMGF-RPDVVIYNTIIDGSCKIGLVNDAVELFDRME 201
Query: 188 RQ--RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKID 245
R R +TYN+L++ + A LM M + I ++ VI + K
Sbjct: 202 RDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFS 261
Query: 246 SSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAA 305
++ KLY+E+ ++ D N +I G G +A + L + G P TY
Sbjct: 262 EAM--KLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNT 319
Query: 306 VITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG 365
+I S R E +F E+ + GL T YN +++GY + G A+ + S M+
Sbjct: 320 LINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR- 378
Query: 366 VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF 425
P+ TYS+L+ R E A ++ + M+ S + + Y+ ++ G G + +
Sbjct: 379 --PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAW 436
Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
+ + + G++PD Y MI F + + + +M +G+ P
Sbjct: 437 DLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 180 bits (456), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 124/468 (26%), Positives = 215/468 (45%), Gaps = 19/468 (4%)
Query: 166 YSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
Y++ I L + +L A L+ Q + +TYN LI +N ++A + KM
Sbjct: 254 YNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMV 313
Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
+G D Y+ +I + + L +++ + + D +I G G+
Sbjct: 314 NEGLEPDSYTYNTLIAGYCKGGMV--QLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGE 371
Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
++A+ A G G+ P Y +I LSN G +EA + E+ E GL P + +N
Sbjct: 372 TNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNI 431
Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
L+ G KMG + DA+ +V M G PD T+++LI Y+ + E+A +L M +
Sbjct: 432 LVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNG 491
Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
P+ + Y+ +L G +++ + K M G P+ +N+++++ +Y L A+
Sbjct: 492 VDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEAL 551
Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTT-TYNIMINL 519
+ M ++ + PD +T+ TLID K G D A LF +M+E +T TYNI+I+
Sbjct: 552 GLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHA 611
Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAF 579
E+ ++L M + L P+ TY +VD + ++G + + L
Sbjct: 612 FTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFL----------- 660
Query: 580 RVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVV 627
M +G PS L +IN + R EA ++ M + GL P+ V
Sbjct: 661 LEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708
Score = 176 bits (447), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 123/492 (25%), Positives = 227/492 (46%), Gaps = 18/492 (3%)
Query: 174 GRSEKLYEAFLLSQRQRL-----TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDF 228
GR K+ EA + +R T +YNA++S + ++A + +MR G D
Sbjct: 87 GRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDV 146
Query: 229 INYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFL 288
++++ ++S +T++ ++L +L + E++ V+ GF + ++
Sbjct: 147 YSFTIRMKSFCKTSRPHAAL--RLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELF 204
Query: 289 GMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKM 348
G G+S +T+ ++ L G E E + +++ + G+ P YN ++G +
Sbjct: 205 GKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQR 264
Query: 349 GYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIY 408
G L A +V + G PD TY+ LI +++ A + L +M +P+S+ Y
Sbjct: 265 GELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTY 324
Query: 409 SRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLS 468
+ ++AGY G Q +++ + +G PD Y +ID + A+A F+ L
Sbjct: 325 NTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALG 384
Query: 469 EGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWED 528
+GI+P+ I +NTLI G A +L EM E+G P T+NI++N L + D
Sbjct: 385 KGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSD 444
Query: 529 VKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLK 588
L+ M ++G P++ T+ L+ Y + ++A+E L+ VM +G+
Sbjct: 445 ADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILD-----------VMLDNGVD 493
Query: 589 PSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVPAV 648
P NSL+N + + + + M E G P++ T+ L+++L R K + +
Sbjct: 494 PDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGL 553
Query: 649 YEEMILSGCTPD 660
EEM PD
Sbjct: 554 LEEMKNKSVNPD 565
Score = 167 bits (422), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 121/484 (25%), Positives = 212/484 (43%), Gaps = 51/484 (10%)
Query: 180 YEAF--LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQS 237
YE F +L+ L T+N L+ + D+++ L+ K+ + G + Y+L IQ
Sbjct: 201 YELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQG 260
Query: 238 LTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLS 297
L C + ELDG A+R +G G
Sbjct: 261 L-------------------CQRGELDG------------------AVRMVGCLIEQGPK 283
Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
P TY +I L + + EAE ++ GL+P + YN L+ GY K G ++ AE +
Sbjct: 284 PDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERI 343
Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
V + +G +PD+ TY LID + G A + E KPN +Y+ ++ G +
Sbjct: 344 VGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSN 403
Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTIT 477
+G Q+ EM G+ P+ +N++++ K C+ A M+S+G PD T
Sbjct: 404 QGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFT 463
Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
+N LI + + + A E+ + M + G P TYN ++N L + ++EDV M
Sbjct: 464 FNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMV 523
Query: 538 AQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSL 597
+G PN+ T+ L++ + + D+A+ LE + +++VN P + +L
Sbjct: 524 EKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVN-----------PDAVTFGTL 572
Query: 598 INAFGEDQRDAEAFAVLQYMKEN-GLKPDVVTYTTLMKALIRVDKFHKVPAVYEEMILSG 656
I+ F ++ A+ + + M+E + TY ++ A +++EM+
Sbjct: 573 IDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRC 632
Query: 657 CTPD 660
PD
Sbjct: 633 LGPD 636
Score = 129 bits (323), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/395 (23%), Positives = 165/395 (41%), Gaps = 24/395 (6%)
Query: 290 MAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMG 349
M + VG Y + G+ EA VFE + +P +YNA++ V G
Sbjct: 66 MRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSG 125
Query: 350 YLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYS 409
Y A V M G+ PD +++++ + ++ R +A +L M + N Y
Sbjct: 126 YFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYC 185
Query: 410 RILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSE 469
++ G+ + +++ +M +SGV +N ++ K + D+++
Sbjct: 186 TVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKR 245
Query: 470 GIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDV 529
G+ P+ T+N I + G D A + + E+G P TYN +I L + ++++
Sbjct: 246 GVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEA 305
Query: 530 KRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFD-------DAI----------------- 565
+ LG M +GL P+ TY TL+ Y + G DA+
Sbjct: 306 EVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDG 365
Query: 566 ECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPD 625
C EG +++A+ F G+KP+ + N+LI EA + M E GL P+
Sbjct: 366 LCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPE 425
Query: 626 VVTYTTLMKALIRVDKFHKVPAVYEEMILSGCTPD 660
V T+ L+ L ++ + + MI G PD
Sbjct: 426 VQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPD 460
Score = 120 bits (302), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 167/371 (45%), Gaps = 18/371 (4%)
Query: 293 GVGLSPKTATYAAVITALSNSGRTIEAEAVFEEL-KESGLKPRTKAYNALLKGYVKMGYL 351
G L PK T AVI + + +E +F + KE G K Y ++++ G
Sbjct: 2 GPPLLPKHVT--AVIKCQKDPMKALE---MFNSMRKEVGFKHTLSTYRSVIEKLGYYGKF 56
Query: 352 KDAEFVVSEM-ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSR 410
+ E V+ +M E G E Y + Y G+ + A V + M+ +P F Y+
Sbjct: 57 EAMEEVLVDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNA 116
Query: 411 ILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG 470
I++ D G + + +V M+ G+ PD + + + + +F K + H A+ + M S+G
Sbjct: 117 IMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQG 176
Query: 471 IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVK 530
E + + + T++ ++ ELF +M G C +T+N ++ +L ++ ++ +
Sbjct: 177 CEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECE 236
Query: 531 RLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPS 590
+LL + +G+LPN+ TY + Q G D A+ + L +Q G KP
Sbjct: 237 KLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQ-----------GPKPD 285
Query: 591 NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVPAVYE 650
+ N+LI ++ + EA L M GL+PD TY TL+ + +
Sbjct: 286 VITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVG 345
Query: 651 EMILSGCTPDR 661
+ + +G PD+
Sbjct: 346 DAVFNGFVPDQ 356
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 180 bits (456), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 118/448 (26%), Positives = 209/448 (46%), Gaps = 13/448 (2%)
Query: 205 RNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELD 264
R+ L A++L S M + ++++ ++ ++ + K D ++ L K++E I D
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYD--VVISLGKKMEVLGIRND 119
Query: 265 GQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFE 324
N VI F S A+ LG +G P T +++ R +A ++ +
Sbjct: 120 LYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVD 179
Query: 325 ELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAG 384
++ E G KP AYNA++ K + DA E+ER G+ P+ TY+ L++ N+
Sbjct: 180 KMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSS 239
Query: 385 RWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYN 444
RW A +L +M PN YS +L + G+ ++ +EM ++PD Y+
Sbjct: 240 RWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYS 299
Query: 445 VMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQER 504
+I+ ++ + A FD M+S+G D +++NTLI+ K R + +LF EM +R
Sbjct: 300 SLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQR 359
Query: 505 GYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA 564
G T TYN +I + + + M G+ P++ TY L+ +G + A
Sbjct: 360 GLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKA 419
Query: 565 IECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKP 624
+ E + + ++ V T ++I + + EA+++ + GLKP
Sbjct: 420 LVIFEDMQKREMDLDIVTYT-----------TVIRGMCKTGKVEEAWSLFCSLSLKGLKP 468
Query: 625 DVVTYTTLMKALIRVDKFHKVPAVYEEM 652
D+VTYTT+M L H+V A+Y +M
Sbjct: 469 DIVTYTTMMSGLCTKGLLHEVEALYTKM 496
Score = 155 bits (392), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 115/438 (26%), Positives = 199/438 (45%), Gaps = 19/438 (4%)
Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS--SLLQKLY 253
+N L+SA + + ++L KM G D +++VI ++ S+L K+
Sbjct: 88 FNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKML 147
Query: 254 K-EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSN 312
K E D++ + G L+N GF + S A+ + +G P Y A+I +L
Sbjct: 148 KLGYEPDRVTI-GSLVN----GFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 202
Query: 313 SGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHT 372
+ R +A F+E++ G++P Y AL+ G DA ++S+M + + P+ T
Sbjct: 203 TKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVIT 262
Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
YS L+DA+ G+ A+ + +EM P+ YS ++ G Q+ M
Sbjct: 263 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMV 322
Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
S G D YN +I+ F K + M F M G+ +T+T+NTLI F+ G D
Sbjct: 323 SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVD 382
Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
+A+E F +M G P TYNI++ L + E + +M+ + + ++VTYTT++
Sbjct: 383 KAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVI 442
Query: 553 DIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFA 612
++G+ ++A LS GLKP + ++++ E A
Sbjct: 443 RGMCKTGKVEEAWSLFCSLS-----------LKGLKPDIVTYTTMMSGLCTKGLLHEVEA 491
Query: 613 VLQYMKENGLKPDVVTYT 630
+ MK+ GL + T +
Sbjct: 492 LYTKMKQEGLMKNDCTLS 509
Score = 149 bits (376), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 173/378 (45%), Gaps = 11/378 (2%)
Query: 294 VGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKD 353
+G+ T+ VI + A ++ ++ + G +P +L+ G+ + + D
Sbjct: 114 LGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSD 173
Query: 354 AEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA 413
A +V +M G PD Y+ +ID+ R A KE+E +PN Y+ ++
Sbjct: 174 AVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVN 233
Query: 414 GYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
G + W ++L +M + P+ Y+ ++D F K + A F+ M+ I+P
Sbjct: 234 GLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDP 293
Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
D +T+++LI+ R D A ++F+ M +G +YN +IN + +R ED +L
Sbjct: 294 DIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLF 353
Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLA 593
M +GL+ N VTY TL+ + Q+G D A E F M G+ P
Sbjct: 354 REMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQE-----------FFSQMDFFGISPDIWT 402
Query: 594 LNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVPAVYEEMI 653
N L+ ++ +A + + M++ + D+VTYTT+++ + + K + +++ +
Sbjct: 403 YNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLS 462
Query: 654 LSGCTPDRKARAMLRSAL 671
L G PD + S L
Sbjct: 463 LKGLKPDIVTYTTMMSGL 480
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/392 (24%), Positives = 181/392 (46%), Gaps = 12/392 (3%)
Query: 159 CYSYELLYSILIHALGRSEKL-YEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMS 217
C+ S+ + LG+ KL YE +T +L++ R + + A++L+
Sbjct: 129 CFCCCFQVSLALSILGKMLKLGYEP---------DRVTIGSLVNGFCRRNRVSDAVSLVD 179
Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
KM + GY D + Y+ +I SL +T +++ + +KEIE I + ++ G
Sbjct: 180 KMVEIGYKPDIVAYNAIIDSLCKTKRVNDAF--DFFKEIERKGIRPNVVTYTALVNGLCN 237
Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
+ S A R L ++P TY+A++ A +G+ +EA+ +FEE+ + P
Sbjct: 238 SSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVT 297
Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
Y++L+ G + +A + M G L D +Y+ LI+ + A R E + +EM
Sbjct: 298 YSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMS 357
Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
N+ Y+ ++ G+ G+ + + +M G+ PD YN+++ L
Sbjct: 358 QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELE 417
Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
A+ F+ M ++ D +T+ T+I K G+ + A LF + +G P TY M+
Sbjct: 418 KALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMM 477
Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
+ L + +V+ L M+ +GL+ N T +
Sbjct: 478 SGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS 509
Score = 138 bits (347), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 157/334 (47%), Gaps = 24/334 (7%)
Query: 351 LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSR 410
L DA + S+M +S P ++ L+ A +++ + K+MEV + + + ++
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125
Query: 411 ILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG 470
++ + + +L +M G EPD +++ F + N + A++ D+M+ G
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185
Query: 471 IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVK 530
+PD + +N +ID K R + A + F+E++ +G P TY ++N L RW D
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245
Query: 531 RLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE------------------------ 566
RLL +M + + PNV+TY+ L+D + ++G+ +A E
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 305
Query: 567 CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDV 626
CL D+A F +M + G ++ N+LIN F + +R + + + M + GL +
Sbjct: 306 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 365
Query: 627 VTYTTLMKALIRVDKFHKVPAVYEEMILSGCTPD 660
VTY TL++ + K + +M G +PD
Sbjct: 366 VTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPD 399
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 179 bits (453), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 123/467 (26%), Positives = 223/467 (47%), Gaps = 17/467 (3%)
Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL--LQKLY 253
+N L+SA A+ + ++L KM++ G + Y+++I R ++I +L L K+
Sbjct: 88 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 147
Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
K I LLN G+ S A+ + +G P T T+ +I L
Sbjct: 148 KLGYEPSIVTLSSLLN----GYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 203
Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
+ EA A+ + + + G +P Y ++ G K G + A ++++ME + + + Y
Sbjct: 204 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIY 263
Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
S +ID+ + A + EME +PN YS +++ + W ++L +M
Sbjct: 264 STVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIE 323
Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
+ P+ +N +ID F K L A +D M+ I+PD T+++LI+ R D
Sbjct: 324 RKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 383
Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
A+ +FE M + FP TYN +IN + +R ++ L M +GL+ N VTYTTL
Sbjct: 384 AKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTL-- 441
Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
I+G F A +C D A F+ M +DG+ P+ + N+L++ ++ + +A V
Sbjct: 442 IHG----FFQARDC-----DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVV 492
Query: 614 LQYMKENGLKPDVVTYTTLMKALIRVDKFHKVPAVYEEMILSGCTPD 660
+Y++ + ++P + TY +++ + + K ++ + L G PD
Sbjct: 493 FEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPD 539
Score = 176 bits (445), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 124/466 (26%), Positives = 222/466 (47%), Gaps = 21/466 (4%)
Query: 130 HSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELL-YSILIHALGRSEKLYEAFLLSQR 188
+++L N S I LA A++ + K L Y ++ S L++ +++ +A L +
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMK--LGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 180
Query: 189 Q-----RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
R +T+ LI ++ +A+ L+ +M Q G + + Y +V+ L +
Sbjct: 181 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 240
Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
ID L L ++E KIE + + + VI K A+ + G+ P TY
Sbjct: 241 ID--LAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITY 298
Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
+++I+ L N R +A + ++ E + P +NAL+ +VK G L +AE + EM +
Sbjct: 299 SSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIK 358
Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
+ PD TYS LI+ + R + A+ + + M PN Y+ ++ G+
Sbjct: 359 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDE 418
Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
++ +EM G+ +T Y +I F + +A F +M+S+G+ P+ +T+NTL+D
Sbjct: 419 GVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLD 478
Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
K G+ ++A +FE +Q P TYNIMI + + + ED L ++ +G+ P
Sbjct: 479 GLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 538
Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKP 589
+V+ Y T++ + C +GL ++A FR MR DG P
Sbjct: 539 DVIIYNTMISGF-----------CRKGLKEEADALFRKMREDGPLP 573
Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 170/389 (43%), Gaps = 42/389 (10%)
Query: 164 LLYSILIHALGRSEKLYEAFLLSQR--QR-LTP--LTYNALISACARNDDLEKALNLMSK 218
+ ++ LIH L K EA L R QR P +TY +++ + D++ A NL++K
Sbjct: 191 ITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNK 250
Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIE------------------CD- 259
M + + YS VI SL + D +L L+ E+E C+
Sbjct: 251 MEAAKIEANVVIYSTVIDSLCKYRHEDDAL--NLFTEMENKGVRPNVITYSSLISCLCNY 308
Query: 260 ----------------KIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
KI + N +I F K G +A + + P TY
Sbjct: 309 ERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 368
Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
+++I R EA+ +FE + P YN L+ G+ K + + + EM +
Sbjct: 369 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQ 428
Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
G++ + TY+ LI + A ++A++V K+M PN Y+ +L G G+ ++
Sbjct: 429 RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEK 488
Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
V + ++ S +EP + YN+MI+ K + F + +G++PD I +NT+I
Sbjct: 489 AMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMIS 548
Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTT 512
+ G + A+ LF +M+E G P + T
Sbjct: 549 GFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 113 bits (283), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 150/323 (46%), Gaps = 11/323 (3%)
Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
Y +L+ + L DA + M +S LP ++ L+ A A +++ + ++M+
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112
Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
N + Y+ ++ + R + +L +M G EP + +++ + +
Sbjct: 113 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
A+A D+M+ G PDTIT+ TLI F + A L + M +RG P TY +++
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
N L ++ + LL M A + NVV Y+T++D C D A+N
Sbjct: 233 NGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSL-----------CKYRHEDDALN 281
Query: 578 AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
F M G++P+ + +SLI+ +R ++A +L M E + P+VVT+ L+ A +
Sbjct: 282 LFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFV 341
Query: 638 RVDKFHKVPAVYEEMILSGCTPD 660
+ K + +Y+EMI PD
Sbjct: 342 KEGKLVEAEKLYDEMIKRSIDPD 364
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 177 bits (450), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 138/539 (25%), Positives = 235/539 (43%), Gaps = 39/539 (7%)
Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLTPLTYN-----ALISACARNDDLEKALNLMSKMR 220
+S L + R+++ L ++ L + +N +I+ C R L A + M K+
Sbjct: 75 FSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKII 134
Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQ----LLNDVIVGFA 276
+ GY D + +S +I L ++ +L E+ +E+ + LN ++ G
Sbjct: 135 KLGYEPDTVTFSTLINGLCLEGRVSEAL------ELVDRMVEMGHKPTLITLNALVNGLC 188
Query: 277 KAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTK 336
G S A+ + G P TY V+ + SG+T A + +++E +K
Sbjct: 189 LNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAV 248
Query: 337 AYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM 396
Y+ ++ G K G L +A + +EME G D Y+ LI + AGRW+ +L++M
Sbjct: 249 KYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDM 308
Query: 397 EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
P+ +S ++ + G+ + ++ KEM G+ PDT Y +ID F K N L
Sbjct: 309 IKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQL 368
Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
A D M+S+G P+ T+N LI+ + K D ELF +M RG T TYN +
Sbjct: 369 DKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTL 428
Query: 517 INLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS---- 572
I E + E K L M ++ + P++V+Y L+D +G + A+E E +
Sbjct: 429 IQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKM 488
Query: 573 --------------------DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFA 612
D A + F + G+KP N +I + +EA
Sbjct: 489 ELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADL 548
Query: 613 VLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVPAVYEEMILSGCTPDRKARAMLRSAL 671
+ + M+E+G P+ TY L++A + K + EE+ G + D M+ L
Sbjct: 549 LFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDML 607
Score = 169 bits (427), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 118/443 (26%), Positives = 201/443 (45%), Gaps = 13/443 (2%)
Query: 210 EKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLN 269
+ A++L +M + I++S + + RT + D L+ L K++E I + L+
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYD--LVLDLCKQMELKGIAHNLYTLS 111
Query: 270 DVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES 329
+I + S A +G +G P T T++ +I L GR EA + + + E
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM 171
Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
G KP NAL+ G G + DA ++ M +G P+E TY ++ +G+ A
Sbjct: 172 GHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALA 231
Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
+L++ME K ++ YS I+ G G F + EM+ G + D Y +I
Sbjct: 232 MELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRG 291
Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
F M+ I PD + ++ LIDC K G+ AEEL +EM +RG P
Sbjct: 292 FCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPD 351
Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
T TY +I+ ++ + + +L M ++G PN+ T+ L++ Y ++ DD +E
Sbjct: 352 TVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLE--- 408
Query: 570 GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
FR M G+ + N+LI F E + A + Q M ++PD+V+Y
Sbjct: 409 --------LFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSY 460
Query: 630 TTLMKALIRVDKFHKVPAVYEEM 652
L+ L + K ++E++
Sbjct: 461 KILLDGLCDNGEPEKALEIFEKI 483
Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 161/371 (43%), Gaps = 37/371 (9%)
Query: 187 QRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS 246
++ +L + Y+ +I ++ L+ A NL ++M G+ D I Y+ +I+ + D
Sbjct: 241 RKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDD 300
Query: 247 SLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAV 306
KL +++ KI D + +I F K G +A G+SP T TY ++
Sbjct: 301 G--AKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSL 358
Query: 307 ITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV 366
I + +A + + + G P + +N L+ GY K + D + +M GV
Sbjct: 359 IDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGV 418
Query: 367 LPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQ 426
+ D TY+ LI + G+ E A+ + +EM +P+ Y +L G D GE ++ +
Sbjct: 419 VADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALE 478
Query: 427 VLKEMKSS-----------------------------------GVEPDTHFYNVMIDTFG 451
+ ++++ S GV+PD YN+MI
Sbjct: 479 IFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLC 538
Query: 452 KYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTT 511
K L A F +M +G P+ T+N LI H G ++ +L EE++ G+ +
Sbjct: 539 KKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDAS 598
Query: 512 TYNIMINLLGE 522
T +++++L +
Sbjct: 599 TVKMVVDMLSD 609
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 177 bits (448), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 117/441 (26%), Positives = 203/441 (46%), Gaps = 48/441 (10%)
Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE 255
YNALI+ + + ++ A ++ +MR + D + Y+++I SL K+D +L
Sbjct: 161 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL------- 213
Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
++ QLL+D P TY +I A G
Sbjct: 214 ------KVLNQLLSD------------------------NCQPTVITYTILIEATMLEGG 243
Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
EA + +E+ GLKP YN +++G K G + A +V +E G PD +Y++
Sbjct: 244 VDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNI 303
Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
L+ A N G+WE ++ +M PN YS ++ G+ + +LK MK G
Sbjct: 304 LLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKG 363
Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
+ PD + Y+ +I F + L A+ + M+S+G PD + +NT++ K G+ D+A
Sbjct: 364 LTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQAL 423
Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
E+F ++ E G P +++YN M + L ++ M + G+ P+ +TY +++
Sbjct: 424 EIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCL 483
Query: 556 GQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ 615
C EG+ D+A MR+ PS + N ++ F + R +A VL+
Sbjct: 484 -----------CREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLE 532
Query: 616 YMKENGLKPDVVTYTTLMKAL 636
M NG +P+ TYT L++ +
Sbjct: 533 SMVGNGCRPNETTYTVLIEGI 553
Score = 165 bits (417), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 174/359 (48%), Gaps = 12/359 (3%)
Query: 313 SGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHT 372
SG IE+ + E + G P L+KG+ + + A V+ +E+ G PD
Sbjct: 102 SGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQ-PDVFA 160
Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
Y+ LI+ + R + A VL M P++ Y+ ++ RG+ +VL ++
Sbjct: 161 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLL 220
Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
S +P Y ++I+ + A+ D MLS G++PD T+NT+I K G D
Sbjct: 221 SDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVD 280
Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
RA E+ ++ +G P +YNI++ L Q +WE+ ++L+ M ++ PNVVTY+ L+
Sbjct: 281 RAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILI 340
Query: 553 DIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFA 612
C +G ++A+N ++M+ GL P + + LI AF + R A
Sbjct: 341 TTL-----------CRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIE 389
Query: 613 VLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVPAVYEEMILSGCTPDRKARAMLRSAL 671
L+ M +G PD+V Y T++ L + K + ++ ++ GC+P+ + + SAL
Sbjct: 390 FLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSAL 448
Score = 159 bits (401), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 106/406 (26%), Positives = 190/406 (46%), Gaps = 7/406 (1%)
Query: 166 YSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISACARNDDLEKALNLMSKMR 220
Y+ LI+ + ++ +A + R R +P +TYN +I + L+ AL +++++
Sbjct: 161 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLL 220
Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
D I Y+++I++ +D +L KL E+ ++ D N +I G K G
Sbjct: 221 SDNCQPTVITYTILIEATMLEGGVDEAL--KLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
+A + + G P +Y ++ AL N G+ E E + ++ P Y+
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338
Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
L+ + G +++A ++ M+ G+ PD ++Y LI A+ GR + A L+ M
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398
Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
P+ Y+ +LA G+ + ++ ++ G P++ YN M A+
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL 458
Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
M+S GI+PD IT+N++I C + G D A EL +M+ + P TYNI++
Sbjct: 459 HMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGF 518
Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE 566
+ R ED +L +M G PN TYT L++ G +G +A+E
Sbjct: 519 CKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAME 564
Score = 156 bits (395), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 113/472 (23%), Positives = 209/472 (44%), Gaps = 18/472 (3%)
Query: 204 ARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL--LQKLYKEIECDKI 261
R+ + ++L+L+ M + GY+ D I + +I+ I ++ ++ L K + D
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVF 159
Query: 262 ELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEA 321
N +I GF K A R L + SP T TY +I +L + G+ A
Sbjct: 160 AY-----NALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 214
Query: 322 VFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYA 381
V +L +P Y L++ + G + +A ++ EM G+ PD TY+ +I
Sbjct: 215 VLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274
Query: 382 NAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTH 441
G + A +++ +E+ +P+ Y+ +L ++G+W+ +++ +M S +P+
Sbjct: 275 KEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334
Query: 442 FYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM 501
Y+++I T + + AM M +G+ PD +++ LI + GR D A E E M
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 394
Query: 502 QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
G P YN ++ L + + + + G + G PN +Y T+ SG
Sbjct: 395 ISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG-- 452
Query: 562 DDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENG 621
D I +A++ M ++G+ P + NS+I+ + EAF +L M+
Sbjct: 453 -DKI--------RALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCE 503
Query: 622 LKPDVVTYTTLMKALIRVDKFHKVPAVYEEMILSGCTPDRKARAMLRSALRY 673
P VVTY ++ + + V E M+ +GC P+ +L + +
Sbjct: 504 FHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGF 555
>sp|Q9C6S6|PPR67_ARATH Putative pentatricopeptide repeat-containing protein At1g31840
OS=Arabidopsis thaliana GN=At1g31840 PE=2 SV=2
Length = 840
Score = 176 bits (447), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 117/498 (23%), Positives = 220/498 (44%), Gaps = 26/498 (5%)
Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
+T+ LI+ + ++++A +L M Q G D I YS +I + + + KL+
Sbjct: 287 VTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGML--GMGHKLF 344
Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
+ ++LD + + I + K+GD + A G+SP TY +I L
Sbjct: 345 SQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQD 404
Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
GR EA ++ ++ + G++P Y++L+ G+ K G L+ + +M + G PD Y
Sbjct: 405 GRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIY 464
Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
+L+D + G A +M + N +++ ++ G+ + +V + M
Sbjct: 465 GVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGI 524
Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
G++PD + ++ L A+ F RM G+EPD + + TLID K +
Sbjct: 525 YGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTI 584
Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
+LF+ MQ N++I+LL + R ED + N+ + P++VTY T++
Sbjct: 585 GLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMIC 644
Query: 554 IYGQSGRFDDA------------------------IECLEGLSDQAVNAFRVMRTDGLKP 589
Y R D+A + C D A+ F +M G KP
Sbjct: 645 GYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKP 704
Query: 590 SNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVPAVY 649
+ + L++ F + +F + + M+E G+ P +V+Y+ ++ L + + + ++
Sbjct: 705 NAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIF 764
Query: 650 EEMILSGCTPDRKARAML 667
+ I + PD A A+L
Sbjct: 765 HQAIDAKLLPDVVAYAIL 782
Score = 143 bits (360), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 112/453 (24%), Positives = 198/453 (43%), Gaps = 23/453 (5%)
Query: 199 LISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKID--SSLLQKLYKE- 255
L+ C R ++KAL + Q G + ++ SL ++++D + KL +
Sbjct: 152 LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGG 211
Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
IE + G +L+ + F K G+ +KA+ F + G + V+ LS
Sbjct: 212 IEPSGVSAHGFVLDAL---FCK-GEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQI 267
Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
+ A + + + G P + L+ G+ K G + A + ME+ G+ PD YS
Sbjct: 268 EV-ASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYST 326
Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
LID Y AG + + K + ++S + Y G+ V K M G
Sbjct: 327 LIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQG 386
Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
+ P+ Y ++I + ++ A + ++L G+EP +T+++LID KCG
Sbjct: 387 ISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGF 446
Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
L+E+M + GY P Y ++++ L +Q R M Q + NVV + +L+D +
Sbjct: 447 ALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGW 506
Query: 556 GQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ 615
+ RFD+A++ FR+M G+KP +++ + R EA +
Sbjct: 507 CRLNRFDEALK-----------VFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFF 555
Query: 616 YMKENGLKPDVVTYTTLMKALIRVDKFHKVPAV 648
M + GL+PD + Y TL+ A + H P +
Sbjct: 556 RMFKMGLEPDALAYCTLIDAFCK----HMKPTI 584
Score = 138 bits (347), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 116/465 (24%), Positives = 210/465 (45%), Gaps = 29/465 (6%)
Query: 144 DLAYAVVSWLQKHNLCYSYE---LLYSILIHALGRSEKLYEAF-----LLSQRQRLTPLT 195
DLA A V + K LC + Y+ILI L + ++YEAF +L + + +T
Sbjct: 371 DLATASVVY--KRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVT 428
Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE 255
Y++LI + +L L M + GY D + Y +++ L++ + ++ + +
Sbjct: 429 YSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAM--RFSVK 486
Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
+ I L+ + N +I G+ + +A++ + G+ P AT+ V+ GR
Sbjct: 487 MLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGR 546
Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
EA +F + + GL+P AY L+ + K + M+R+ + D ++
Sbjct: 547 LEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNV 606
Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGY---RDRGEWQRTFQVLKEMK 432
+I R E A + +P+ Y+ ++ GY R E +R F++LK
Sbjct: 607 VIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLK--- 663
Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
+ P+T ++I K N + A+ F M +G +P+ +T+ L+D K +
Sbjct: 664 VTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIE 723
Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
+ +LFEEMQE+G P +Y+I+I+ L ++ R ++ + LLP+VV Y L+
Sbjct: 724 GSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILI 783
Query: 553 DIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSL 597
Y + GR +A E M +G+KP +L +L
Sbjct: 784 RGYCKVGRLVEAALLYEH-----------MLRNGVKPDDLLQRAL 817
Score = 129 bits (325), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 112/444 (25%), Positives = 198/444 (44%), Gaps = 57/444 (12%)
Query: 276 AKAGDASKAMRFLGMAQGVGLS-PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPR 334
+ G KA+ + +G+ P+ + Y ++ +L S R F++L G++P
Sbjct: 157 CRYGMVDKALEIFVYSTQLGVVIPQDSVYR-MLNSLIGSDRVDLIADHFDKLCRGGIEP- 214
Query: 335 TKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLK 394
G G++ DA F E+ ++ D H L+++ G S VLK
Sbjct: 215 --------SGVSAHGFVLDALFCKGEVTKA---LDFH--RLVMERGFRVG-IVSCNKVLK 260
Query: 395 EMEVSHAK---------------PNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPD 439
+ V + PN + ++ G+ RGE R F + K M+ G+EPD
Sbjct: 261 GLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPD 320
Query: 440 THFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFE 499
Y+ +ID + K L F + L +G++ D + +++ ID + K G A +++
Sbjct: 321 LIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYK 380
Query: 500 EMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSG 559
M +G P TY I+I L + R + + G + +G+ P++VTY++L+D + + G
Sbjct: 381 RMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCG 440
Query: 560 R-------FDDAIE------------CLEGLSDQAV--NAFRV---MRTDGLKPSNLALN 595
++D I+ ++GLS Q + +A R M ++ + + N
Sbjct: 441 NLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFN 500
Query: 596 SLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVPAVYEEMILS 655
SLI+ + R EA V + M G+KPDV T+TT+M+ I + + ++ M
Sbjct: 501 SLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKM 560
Query: 656 GCTPDRKARAMLRSAL-RYMKQTL 678
G PD A L A ++MK T+
Sbjct: 561 GLEPDALAYCTLIDAFCKHMKPTI 584
>sp|Q9ZQF1|PP152_ARATH Pentatricopeptide repeat-containing protein At2g15630,
mitochondrial OS=Arabidopsis thaliana GN=At2g15630 PE=3
SV=1
Length = 627
Score = 176 bits (446), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 132/534 (24%), Positives = 248/534 (46%), Gaps = 57/534 (10%)
Query: 145 LAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRLTPLT--YNALISA 202
LA AV+S L +LL ++ L++ +L+ + T T ++ L+
Sbjct: 107 LAIAVISKLSSPKPVT--QLLKEVVTSRKNSIRNLFDELVLAHDRLETKSTILFDLLVRC 164
Query: 203 CARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIE 262
C + +++A+ M++ G++ + ++ L+R N+I+++ + Y ++ +I+
Sbjct: 165 CCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWV--FYADMYRMEIK 222
Query: 263 LDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIE---- 318
+ N +I K G KA FLG+ + G+ P TY ++ S GR IE
Sbjct: 223 SNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGR-IEGARL 281
Query: 319 -----------------------------AEAVFEELKESGLKPRTKAYNALLKGYVKMG 349
A V E+KE GL P + +YN L++G G
Sbjct: 282 IISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEIGLVPDSVSYNILIRGCSNNG 341
Query: 350 YLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYS 409
L+ A EM + G++P +TY+ LI + E+A I+++E+ +S Y+
Sbjct: 342 DLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYN 401
Query: 410 RILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSE 469
++ GY G+ ++ F + EM + G++P Y +I + N A F++++ +
Sbjct: 402 ILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGK 461
Query: 470 GIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDV 529
G++PD + NTL+D H G DRA L +EM P TYN ++ L + ++E+
Sbjct: 462 GMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEA 521
Query: 530 KRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRV---MRTDG 586
+ L+G M+ +G+ P+ ++Y TL+ Y + G +AF V M + G
Sbjct: 522 RELMGEMKRRGIKPDHISYNTLISGYSKKG--------------DTKHAFMVRDEMLSLG 567
Query: 587 LKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVD 640
P+ L N+L+ ++Q A +L+ MK G+ P+ ++ ++++A+ +D
Sbjct: 568 FNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSNLD 621
Score = 110 bits (276), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 139/294 (47%), Gaps = 8/294 (2%)
Query: 124 VPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF 183
VP + +++L CS+N +++A+A + K + ++ Y+ LIH L K+ A
Sbjct: 324 VPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTF-YTYNTLIHGLFMENKIEAAE 382
Query: 184 LLSQRQR-----LTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSL 238
+L + R L +TYN LI+ ++ D +KA L +M DG Y+ +I L
Sbjct: 383 ILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVL 442
Query: 239 TRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSP 298
R NK + +L++++ ++ D ++N ++ G G+ +A L + ++P
Sbjct: 443 CRKNKTREA--DELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINP 500
Query: 299 KTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVV 358
TY ++ L G+ EA + E+K G+KP +YN L+ GY K G K A V
Sbjct: 501 DDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVR 560
Query: 359 SEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRIL 412
EM G P TY+ L+ + E A +L+EM+ PN + ++
Sbjct: 561 DEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVI 614
Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 97/220 (44%), Gaps = 14/220 (6%)
Query: 440 THFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFE 499
T +++++ + + A+ F M +G P T T N ++ + R + A +
Sbjct: 155 TILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYA 214
Query: 500 EMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSG 559
+M T+NIMIN+L ++ + + K LG M G+ P +VTY TLV + G
Sbjct: 215 DMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRG 274
Query: 560 RFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKE 619
R + A + M++ G +P N +++ + R +E VL+ MKE
Sbjct: 275 RIEGARLIISE-----------MKSKGFQPDMQTYNPILSWMCNEGRASE---VLREMKE 320
Query: 620 NGLKPDVVTYTTLMKALIRVDKFHKVPAVYEEMILSGCTP 659
GL PD V+Y L++ A +EM+ G P
Sbjct: 321 IGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVP 360
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 176 bits (445), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 146/581 (25%), Positives = 247/581 (42%), Gaps = 91/581 (15%)
Query: 167 SILIHALGRSEKLYEA----FLLSQRQRLTPL----TYNALISACARNDD---------- 208
S +IH L RS +L +A + +R ++ L + ++ S C ND
Sbjct: 117 SAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYV 176
Query: 209 ----LEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELD 264
L +A + +R G+ + +I SL R ++ L +Y+EI + ++
Sbjct: 177 QARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVE--LAWGVYQEISRSGVGIN 234
Query: 265 GQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFE 324
LN ++ K G K FL Q G+ P TY +I+A S+ G EA +
Sbjct: 235 VYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMN 294
Query: 325 ELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY-SLLIDAYANA 383
+ G P YN ++ G K G + A+ V +EM RSG+ PD TY SLL++A
Sbjct: 295 AMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKG 354
Query: 384 GRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFY 443
E+ + V +M P+ +S +++ + G + +K +G+ PD Y
Sbjct: 355 DVVETEK-VFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIY 413
Query: 444 NVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGR--YDRAEELFEEM 501
++I + + + AM + ML +G D +T+NT++ H C R A++LF EM
Sbjct: 414 TILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTIL--HGLCKRKMLGEADKLFNEM 471
Query: 502 QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
ER FP + T I+I+ + ++ L M+ + + +VVTY TL+D +G+ G
Sbjct: 472 TERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDI 531
Query: 562 DDAIECLEGLSDQAV---------------------NAFRV------------------- 581
D A E + + + AFRV
Sbjct: 532 DTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSM 591
Query: 582 -------------------MRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKE--N 620
M ++G P ++ N+LI F ++ ++AF +++ M+E
Sbjct: 592 IKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQG 651
Query: 621 GLKPDVVTYTTLMKALIRVDKFHKVPAVYEEMILSGCTPDR 661
GL PDV TY +++ R ++ + V +MI G PDR
Sbjct: 652 GLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDR 692
Score = 174 bits (442), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 116/494 (23%), Positives = 219/494 (44%), Gaps = 28/494 (5%)
Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
T N +++A ++ +EK +S++++ G + D + Y+ +I + + ++ + +L
Sbjct: 237 TLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAF--ELMN 294
Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
+ N VI G K G +A GLSP + TY +++ G
Sbjct: 295 AMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKG 354
Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
+E E VF +++ + P +++++ + + G L A + ++ +G++PD Y+
Sbjct: 355 DVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYT 414
Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
+LI Y G A + EM + Y+ IL G R ++ EM
Sbjct: 415 ILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTER 474
Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
+ PD++ ++ID K L +AM F +M + I D +T+NTL+D K G D A
Sbjct: 475 ALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTA 534
Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
+E++ +M + P +Y+I++N L + + R+ M ++ + P V+ +++
Sbjct: 535 KEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKG 594
Query: 555 YGQSGRFDDAIECLEGLSDQAV---------------------NAFRVMRT-----DGLK 588
Y +SG D LE + + AF +++ GL
Sbjct: 595 YCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLV 654
Query: 589 PSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVPAV 648
P NS+++ F + EA VL+ M E G+ PD TYT ++ + D + +
Sbjct: 655 PDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRI 714
Query: 649 YEEMILSGCTPDRK 662
++EM+ G +PD K
Sbjct: 715 HDEMLQRGFSPDDK 728
Score = 135 bits (340), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 97/395 (24%), Positives = 182/395 (46%), Gaps = 9/395 (2%)
Query: 166 YSILIHAL---GRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
Y+ +I+ L G+ E+ E F R L+P TY +L+ + D+ + + S MR
Sbjct: 308 YNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMR 367
Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
D + +S ++ TR+ +D +L+ + ++ + D + +I G+ + G
Sbjct: 368 SRDVVPDLVCFSSMMSLFTRSGNLDKALM--YFNSVKEAGLIPDNVIYTILIQGYCRKGM 425
Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
S AM G + TY ++ L EA+ +F E+ E L P +
Sbjct: 426 ISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTI 485
Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
L+ G+ K+G L++A + +M+ + D TY+ L+D + G ++A+ + +M
Sbjct: 486 LIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKE 545
Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
P YS ++ +G F+V EM S ++P N MI + +
Sbjct: 546 ILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGE 605
Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQER--GYFPCTTTYNIMIN 518
+ ++M+SEG PD I++NTLI + +A L ++M+E G P TYN +++
Sbjct: 606 SFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILH 665
Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
Q + ++ + +L M +G+ P+ TYT +++
Sbjct: 666 GFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMIN 700
Score = 133 bits (335), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 90/378 (23%), Positives = 163/378 (43%), Gaps = 24/378 (6%)
Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
EA F L+ G A NAL+ V++G+++ A V E+ RSGV + +T ++++
Sbjct: 183 EAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMV 242
Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
+A G+ E L +++ P+ Y+ +++ Y +G + F+++ M G
Sbjct: 243 NALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFS 302
Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
P + YN +I+ K+ A F ML G+ PD+ T+ +L+ K G E++
Sbjct: 303 PGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKV 362
Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
F +M+ R P ++ M++L + +++ GL+P+ V YT L+ Y +
Sbjct: 363 FSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCR 422
Query: 558 SGRFDDAIE------------------------CLEGLSDQAVNAFRVMRTDGLKPSNLA 593
G A+ C + +A F M L P +
Sbjct: 423 KGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYT 482
Query: 594 LNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVPAVYEEMI 653
L LI+ + A + Q MKE ++ DVVTY TL+ +V ++ +M+
Sbjct: 483 LTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMV 542
Query: 654 LSGCTPDRKARAMLRSAL 671
P + ++L +AL
Sbjct: 543 SKEILPTPISYSILVNAL 560
Score = 93.2 bits (230), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/370 (20%), Positives = 154/370 (41%), Gaps = 45/370 (12%)
Query: 115 FKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALG 174
F S VP + S + +L + + ++D A + +++ L ++Y+ILI
Sbjct: 363 FSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPD-NVIYTILIQGYC 421
Query: 175 RSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFI 229
R + A +L Q + +TYN ++ + L +A L ++M + D
Sbjct: 422 RKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSY 481
Query: 230 NYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLG 289
+++I + + +++ +L+++++ +I LD N ++ GF K GD A
Sbjct: 482 TLTILIDGHCKLGNLQNAM--ELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWA 539
Query: 290 MAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMG 349
+ P +Y+ ++ AL + G EA V++E+ +KP N+++KGY + G
Sbjct: 540 DMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSG 599
Query: 350 YLKDAEFVVSEM-------------------------------------ERSGVLPDEHT 372
D E + +M E+ G++PD T
Sbjct: 600 NASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFT 659
Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
Y+ ++ + + + A +VL++M P+ Y+ ++ G+ + F++ EM
Sbjct: 660 YNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEML 719
Query: 433 SSGVEPDTHF 442
G PD F
Sbjct: 720 QRGFSPDDKF 729
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 90/231 (38%), Gaps = 47/231 (20%)
Query: 443 YNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQ 502
++++I T+ + L A AF + S+G N LI + G + A +++E+
Sbjct: 168 FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEIS 227
Query: 503 ERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFD 562
G T NIM+N L + + E V L ++ +
Sbjct: 228 RSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEK----------------------- 264
Query: 563 DAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGL 622
G+ P + N+LI+A+ EAF ++ M G
Sbjct: 265 -----------------------GVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGF 301
Query: 623 KPDVVTYTTLMKALIRVDKFHKVPAVYEEMILSGCTPDRKA-RAMLRSALR 672
P V TY T++ L + K+ + V+ EM+ SG +PD R++L A +
Sbjct: 302 SPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACK 352
>sp|Q9FMQ1|PP376_ARATH Pentatricopeptide repeat-containing protein At5g12100,
mitochondrial OS=Arabidopsis thaliana GN=At5g12100 PE=2
SV=1
Length = 816
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 138/550 (25%), Positives = 246/550 (44%), Gaps = 31/550 (5%)
Query: 146 AYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRLTPLT--YNALISAC 203
A+++ S KH+ Y LL S+L++ + + F + + + P + L+
Sbjct: 98 AFSLSSPSLKHDFSY---LLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHL 154
Query: 204 ARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIEL 263
+ +N+ + + + Y IQ+ + + + L +L+ ++ D+I
Sbjct: 155 VKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGL--ELFNRMKHDRIYP 212
Query: 264 DGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVF 323
+ N +I G K + A + L P TY +I +G ++ V
Sbjct: 213 SVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVR 272
Query: 324 EELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANA 383
E +K ++P +N LLKG K G ++DAE V+ EM+ G +PD T+S+L D Y++
Sbjct: 273 ERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSN 332
Query: 384 GRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFY 443
+ E+A V + S K N++ S +L G+ ++ ++L + G+ P+ Y
Sbjct: 333 EKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIY 392
Query: 444 NVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQE 503
N MID + + L A + M +G++PD + +N LI + G + AE+ +M+
Sbjct: 393 NTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKL 452
Query: 504 RGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDD 563
+G P TYNI+I G + ++ +L M G +PNVV+Y TL++ + + +
Sbjct: 453 KGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLE 512
Query: 564 AIECLEGLSDQAV---------------------NAFRV---MRTDGLKPSNLALNSLIN 599
A + D+ V +AFR M G++ + + N+LI+
Sbjct: 513 AQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLID 572
Query: 600 AFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVPAVYEEMILSGCTP 659
+ +EA +L + GLKPDV TY +L+ + A+YEEM SG P
Sbjct: 573 GLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKP 632
Query: 660 DRKARAMLRS 669
K +L S
Sbjct: 633 TLKTYHLLIS 642
Score = 153 bits (386), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 123/529 (23%), Positives = 231/529 (43%), Gaps = 57/529 (10%)
Query: 164 LLYSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISACARNDDLEKALNLMSK 218
+ Y+ LI ++ ++F + +R + + P +T+N L+ + +E A N++ +
Sbjct: 250 ITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKE 309
Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
M+ G+ D +S++ + K +++L +Y+ ++++ + ++ K
Sbjct: 310 MKDLGFVPDAFTFSILFDGYSSNEKAEAAL--GVYETAVDSGVKMNAYTCSILLNALCKE 367
Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
G KA LG GL P Y +I G + A E +++ G+KP AY
Sbjct: 368 GKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAY 427
Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
N L++ + ++G +++AE V++M+ GV P TY++LI Y ++ +LKEME
Sbjct: 428 NCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMED 487
Query: 399 SHAKPNSF-----------------------------------IYSRILAGYRDRGEWQR 423
+ PN IY+ ++ G +G+ +
Sbjct: 488 NGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIED 547
Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
F+ KEM G+E + YN +ID L A + +G++PD T+N+LI
Sbjct: 548 AFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLIS 607
Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
+ G R L+EEM+ G P TY+++I+L +E E +RL G M L P
Sbjct: 608 GYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLC-TKEGIELTERLFGEM---SLKP 663
Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
+++ Y ++ Y G + A + + ++++ GL + NSLI +
Sbjct: 664 DLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSI---------GLDKT--TYNSLILGQLK 712
Query: 604 DQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVPAVYEEM 652
+ E +++ M ++P+ TY ++K V + Y EM
Sbjct: 713 VGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREM 761
Score = 132 bits (332), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 164/347 (47%), Gaps = 6/347 (1%)
Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
TYN LI R + +K +++ +M +G + ++Y +I L + +K+ + Q + +
Sbjct: 461 TYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEA--QIVKR 518
Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
++E + ++ N +I G G A RF G+ TY +I LS +G
Sbjct: 519 DMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTG 578
Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
+ EAE + E+ GLKP YN+L+ GY G ++ + EM+RSG+ P TY
Sbjct: 579 KLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYH 638
Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
LLI G + R+ EM + KP+ +Y+ +L Y G+ ++ F + K+M
Sbjct: 639 LLISLCTKEGIELTERL-FGEMSL---KPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEK 694
Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
+ D YN +I K L + D M + +EP+ T+N ++ H + Y A
Sbjct: 695 SIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSA 754
Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
+ EMQE+G+ N +++ L E+ R ++ + ++ M + L
Sbjct: 755 YVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEMNGRML 801
Score = 89.4 bits (220), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 106/241 (43%), Gaps = 11/241 (4%)
Query: 431 MKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGR 490
+++ G+ P + +++D K + F +L P + I K
Sbjct: 135 LRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSD 194
Query: 491 YDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT 550
+ ELF M+ +P YN++I+ L + +R D ++L M A+ LLP+++TY T
Sbjct: 195 VGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNT 254
Query: 551 LVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEA 610
L+D Y C G +++ M+ D ++PS + N+L+ + +A
Sbjct: 255 LIDGY-----------CKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDA 303
Query: 611 FAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVPAVYEEMILSGCTPDRKARAMLRSA 670
VL+ MK+ G PD T++ L +K VYE + SG + ++L +A
Sbjct: 304 ENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNA 363
Query: 671 L 671
L
Sbjct: 364 L 364
>sp|Q0WPZ6|PP158_ARATH Pentatricopeptide repeat-containing protein At2g17140
OS=Arabidopsis thaliana GN=At2g17140 PE=2 SV=1
Length = 874
Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 149/585 (25%), Positives = 266/585 (45%), Gaps = 56/585 (9%)
Query: 132 LLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL---GRSEKLYEAFLLSQR 188
L++ LC S S +D A + + + C E + IL+ G ++K E +
Sbjct: 153 LIRALCDS-SCVDAARELFDEMPEKG-CKPNEFTFGILVRGYCKAGLTDKGLELLNAMES 210
Query: 189 QRLTP--LTYNALISA-C--ARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
+ P + YN ++S+ C RNDD EK ++ KMR++G D + ++ I +L + K
Sbjct: 211 FGVLPNKVIYNTIVSSFCREGRNDDSEK---MVEKMREEGLVPDIVTFNSRISALCKEGK 267
Query: 244 I-DSSLLQKLYKEIECDKI----ELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSP 298
+ D+S +++ ++E D+ + N ++ GF K G A +
Sbjct: 268 VLDAS---RIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLA 324
Query: 299 KTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVV 358
+Y + L G+ IEAE V +++ + G+ P +YN L+ G K+G L DA+ +V
Sbjct: 325 SLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIV 384
Query: 359 SEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDR 418
M+R+GV PD TY L+ Y + G+ ++A+ +L+EM ++ PN++ + +L
Sbjct: 385 GLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKM 444
Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH-----------HAMAAF---- 463
G ++L++M G DT N+++D L H AA
Sbjct: 445 GRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLG 504
Query: 464 --------DRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNI 515
D ++ PD IT++TL++ K GR+ A+ LF EM P + YNI
Sbjct: 505 NSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNI 564
Query: 516 MINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQA 575
I+ +Q + R+L +M +G ++ TY +L+ G + I + GL D+
Sbjct: 565 FIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLG----IKNQIFEIHGLMDE- 619
Query: 576 VNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
M+ G+ P+ N+ I E ++ +A +L M + + P+V ++ L++A
Sbjct: 620 ------MKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEA 673
Query: 636 LIRVDKFHKVPAVYEEMILSGCTPDRKARAMLRSALRYMKQTLKT 680
+V F V+E + S C +++ + L Q LK
Sbjct: 674 FCKVPDFDMAQEVFETAV-SICGQKEGLYSLMFNELLAAGQLLKA 717
Score = 167 bits (424), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 124/502 (24%), Positives = 228/502 (45%), Gaps = 47/502 (9%)
Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFI----NYSLVIQSLTRTNKIDSSLLQK 251
YN L+ +C + E+ + +S + +D C ++L+I++L ++ +D++ ++
Sbjct: 115 YNLLLESCIK----ERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAA--RE 168
Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
L+ E+ + + ++ G+ KAG K + L + G+ P Y ++++
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFC 228
Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVL---- 367
GR ++E + E+++E GL P +N+ + K G + DA + S+ME L
Sbjct: 229 REGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPR 288
Query: 368 PDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQV 427
P+ TY+L++ + G E A+ + + + + + Y+ L G G++ V
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETV 348
Query: 428 LKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFK 487
LK+M G+ P + YN+++D K L A M G+ PD +T+ L+ +
Sbjct: 349 LKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCS 408
Query: 488 CGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVT 547
G+ D A+ L +EM P T NI+++ L + R + + LL M +G + VT
Sbjct: 409 VGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVT 468
Query: 548 YTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRD 607
+VD SG D AIE ++G MR G + AL +L N++ D
Sbjct: 469 CNIIVDGLCGSGELDKAIEIVKG-----------MRVHG----SAALGNLGNSYIGLVDD 513
Query: 608 AEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVPAVYEEMILSGCTPDRKA---- 663
+ + EN PD++TY+TL+ L + +F + ++ EM+ PD A
Sbjct: 514 S--------LIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIF 565
Query: 664 ------RAMLRSALRYMKQTLK 679
+ + SA R +K K
Sbjct: 566 IHHFCKQGKISSAFRVLKDMEK 587
Score = 136 bits (342), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 166/347 (47%), Gaps = 15/347 (4%)
Query: 332 KPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARI 391
KP YN LL+ +K ++ ++ +M G+ P +T++LLI A ++ ++AR
Sbjct: 109 KPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARE 168
Query: 392 VLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFG 451
+ EM KPN F + ++ GY G + ++L M+S GV P+ YN ++ +F
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFC 228
Query: 452 KYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYF---- 507
+ + ++M EG+ PD +T+N+ I K G+ A +F +M+ Y
Sbjct: 229 REGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPR 288
Query: 508 PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIEC 567
P + TYN+M+ + ED K L ++R L ++ +Y + + G+F +A
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETV 348
Query: 568 LEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVV 627
L+ ++D+ G+ PS + N L++ + ++A ++ MK NG+ PD V
Sbjct: 349 LKQMTDK-----------GIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAV 397
Query: 628 TYTTLMKALIRVDKFHKVPAVYEEMILSGCTPDRKARAMLRSALRYM 674
TY L+ V K ++ +EM+ + C P+ +L +L M
Sbjct: 398 TYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKM 444
Score = 97.1 bits (240), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 109/484 (22%), Positives = 197/484 (40%), Gaps = 58/484 (11%)
Query: 166 YSILIHALGRSEKLYEA-FLLSQR--QRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
Y+I + L R K EA +L Q + + P +YN L+ + L A ++ M+
Sbjct: 329 YNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMK 388
Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDS--SLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
++G D + Y ++ K+D+ SLLQ++ + + + N ++ K
Sbjct: 389 RNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMR----NNCLPNAYTCNILLHSLWKM 444
Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELK----------- 327
G S+A L G T T ++ L SG +A + + ++
Sbjct: 445 GRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLG 504
Query: 328 ------------ESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
E+ P Y+ LL G K G +A+ + +EM + PD Y++
Sbjct: 505 NSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNI 564
Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
I + G+ SA VLK+ME + Y+ ++ G + + ++ EMK G
Sbjct: 565 FIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKG 624
Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
+ P+ YN I + + A D M+ + I P+ ++ LI+ K +D A+
Sbjct: 625 ISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQ 684
Query: 496 ELFEEM-----QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT 550
E+FE Q+ G Y++M N L + LL + +G Y
Sbjct: 685 EVFETAVSICGQKEGL------YSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKD 738
Query: 551 LVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE--DQRDA 608
LV+ + D +E G+ + ++ R G P+ AL +I+ G+ ++++A
Sbjct: 739 LVESLCKK----DELEVASGILHKMID-----RGYGFDPA--ALMPVIDGLGKMGNKKEA 787
Query: 609 EAFA 612
+FA
Sbjct: 788 NSFA 791
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/404 (20%), Positives = 158/404 (39%), Gaps = 66/404 (16%)
Query: 126 APLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLL 185
A + LL CS +D A +++ + ++N C +IL+H+L + ++ EA L
Sbjct: 396 AVTYGCLLHGYCSV-GKVDAAKSLLQEMMRNN-CLPNAYTCNILLHSLWKMGRISEAEEL 453
Query: 186 SQRQR-----LTPLTYNALISACARNDDLEKALNLMSKMRQDGY---------------- 224
++ L +T N ++ + +L+KA+ ++ MR G
Sbjct: 454 LRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDD 513
Query: 225 -----HC--DFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
+C D I YS ++ L + + + + L+ E+ +K++ D N I F K
Sbjct: 514 SLIENNCLPDLITYSTLLNGLCKAGRFAEA--KNLFAEMMGEKLQPDSVAYNIFIHHFCK 571
Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
G S A R L + G TY ++I L + E + +E+KE G+ P
Sbjct: 572 QGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICT 631
Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPD---------------------------- 369
YN ++ + ++DA ++ EM + + P+
Sbjct: 632 YNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAV 691
Query: 370 ------EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
E YSL+ + AG+ A +L+ + + +F+Y ++ + E +
Sbjct: 692 SICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEV 751
Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRML 467
+L +M G D +ID GK A + D+M+
Sbjct: 752 ASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKMM 795
Score = 33.1 bits (74), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 593 ALNSLINAFGEDQRDAEAFAVLQYMK----ENGLKPDVVTYTTLMKALIRVDKFHKVPAV 648
+L S+++ F + +AF Q ++ EN KP V Y L+++ I+ + V +
Sbjct: 77 SLLSVVSIFAKSNHIDKAFPQFQLVRSRFPEN--KPSVYLYNLLLESCIKERRVEFVSWL 134
Query: 649 YEEMILSGCTPDRKARAMLRSAL 671
Y++M+L G P +L AL
Sbjct: 135 YKDMVLCGIAPQTYTFNLLIRAL 157
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 174 bits (440), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 122/453 (26%), Positives = 210/453 (46%), Gaps = 14/453 (3%)
Query: 209 LEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLL 268
L+ A+ L M + + +S ++ ++ + NK D L+ L ++++ I +
Sbjct: 56 LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFD--LVISLGEQMQNLGISHNLYTY 113
Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
+ I F + S A+ LG +G P T +++ + R EA A+ +++ E
Sbjct: 114 SIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVE 173
Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
G +P T + L+ G + +A +V M G PD TY +I+ G +
Sbjct: 174 MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDL 233
Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
A +L +ME + + IY+ I+ G F + +M++ G++PD YN +I
Sbjct: 234 ALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLIS 293
Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM-QERGYF 507
Y A ML + I PD + +N LID K G+ AE+L++EM + + F
Sbjct: 294 CLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCF 353
Query: 508 PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIEC 567
P YN +I + +R E+ + M +GL+ N VTYTTL I+G F A +C
Sbjct: 354 PDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTL--IHG----FFQARDC 407
Query: 568 LEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVV 627
D A F+ M +DG+ P + N L++ + A V +YM++ +K D+V
Sbjct: 408 -----DNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIV 462
Query: 628 TYTTLMKALIRVDKFHKVPAVYEEMILSGCTPD 660
TYTT+++AL + K ++ + L G P+
Sbjct: 463 TYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPN 495
Score = 171 bits (434), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 138/529 (26%), Positives = 244/529 (46%), Gaps = 24/529 (4%)
Query: 122 RAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELL-YSILIHALGRSEKLY 180
R P+ + S L + + + DL ++ +Q NL S+ L YSI I+ R +L
Sbjct: 70 RPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQ--NLGISHNLYTYSIFINYFCRRSQLS 127
Query: 181 EAF-LLSQRQRL----TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVI 235
A +L + +L + +T N+L++ + + +A+ L+ +M + GY D + ++ ++
Sbjct: 128 LALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLV 187
Query: 236 QSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVG 295
L + NK ++ L + + + D VI G K G+ A+ L +
Sbjct: 188 HGLFQHNKASEAV--ALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGK 245
Query: 296 LSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAE 355
+ Y +I L +A +F +++ G+KP YN L+ G DA
Sbjct: 246 IEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDAS 305
Query: 356 FVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS-HAKPNSFIYSRILAG 414
++S+M + PD ++ LIDA+ G+ A + EM S H P+ Y+ ++ G
Sbjct: 306 RLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKG 365
Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
+ + +V +EM G+ +T Y +I F + +A F +M+S+G+ PD
Sbjct: 366 FCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPD 425
Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
+T+N L+D G + A +FE MQ+R TY MI L + + ED L
Sbjct: 426 IMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFC 485
Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLAL 594
++ +G+ PNVVTYTT++ + C +GL ++A F M+ DG P++
Sbjct: 486 SLSLKGVKPNVVTYTTMMSGF-----------CRKGLKEEADALFVEMKEDGPLPNSGTY 534
Query: 595 NSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI--RVDK 641
N+LI A D +A + +++ M+ G D T+ + L R+DK
Sbjct: 535 NTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNMLHDGRLDK 583
Score = 168 bits (426), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 122/481 (25%), Positives = 219/481 (45%), Gaps = 19/481 (3%)
Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL--LQKLY 253
++ L+SA A+ + + ++L +M+ G + YS+ I R +++ +L L K+
Sbjct: 78 FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMM 137
Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
K I LLN GF S+A+ + +G P T T+ ++ L
Sbjct: 138 KLGYGPSIVTLNSLLN----GFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQH 193
Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
+ EA A+ E + G +P Y A++ G K G A ++++ME+ + D Y
Sbjct: 194 NKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIY 253
Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
+ +ID + A + +ME KP+ F Y+ +++ + G W ++L +M
Sbjct: 254 NTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLE 313
Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRML-SEGIEPDTITWNTLIDCHFKCGRYD 492
+ PD F+N +ID F K L A +D M+ S+ PD + +NTLI K R +
Sbjct: 314 KNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVE 373
Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
E+F EM +RG T TY +I+ + ++ + + M + G+ P+++TY L+
Sbjct: 374 EGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILL 433
Query: 553 DIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFA 612
D C G + A+ F M+ +K + ++I A + + + +
Sbjct: 434 DGL-----------CNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWD 482
Query: 613 VLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVPAVYEEMILSGCTPDRKA-RAMLRSAL 671
+ + G+KP+VVTYTT+M R + A++ EM G P+ ++R+ L
Sbjct: 483 LFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARL 542
Query: 672 R 672
R
Sbjct: 543 R 543
Score = 80.5 bits (197), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 89/171 (52%), Gaps = 11/171 (6%)
Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
+ D A LF +M + FP ++ +++ + + +++ V L M+ G+ N+ TY+
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 550 TLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
++ + + + A+ L ++M+ G PS + LNSL+N F R +E
Sbjct: 115 IFINYFCRRSQLSLALAILG----------KMMKL-GYGPSIVTLNSLLNGFCHGNRISE 163
Query: 610 AFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVPAVYEEMILSGCTPD 660
A A++ M E G +PD VT+TTL+ L + +K + A+ E M++ GC PD
Sbjct: 164 AVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPD 214
>sp|Q9S7Q2|PP124_ARATH Pentatricopeptide repeat-containing protein At1g74850,
chloroplastic OS=Arabidopsis thaliana GN=PTAC2 PE=2 SV=1
Length = 862
Score = 174 bits (440), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 131/516 (25%), Positives = 226/516 (43%), Gaps = 87/516 (16%)
Query: 152 WLQKHNLCYSYELLYSILIHALGRS---EKLYEAF--LLSQRQRLTPLTYNALISACARN 206
++Q+ C E +Y+I+I LGR +K E F + SQ + +Y ALI+A RN
Sbjct: 130 YMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRN 189
Query: 207 DDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQ 266
E +L L+ +M+ + + Y+ VI + R +D L L+ E+ +
Sbjct: 190 GRYETSLELLDRMKNEKISPSILTYNTVINACAR-GGLDWEGLLGLFAEMRHE------- 241
Query: 267 LLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEEL 326
G+ P TY +++A + G EAE VF +
Sbjct: 242 ----------------------------GIQPDIVTYNTLLSACAIRGLGDEAEMVFRTM 273
Query: 327 KESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRW 386
+ G+ P Y+ L++ + K+ L+ ++ EM G LPD +Y++L++AYA +G
Sbjct: 274 NDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSI 333
Query: 387 ESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVM 446
+ A V +M+ + PN+ YS +L + G + Q+ EMKSS +PD YN++
Sbjct: 334 KEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNIL 393
Query: 447 IDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGY 506
I+ FG+ + F M+ E IEPD T+ +I F CG+ E
Sbjct: 394 IEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGII---FACGKGGLHE----------- 439
Query: 507 FPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE 566
D +++L M A ++P+ YT +++ +GQ+
Sbjct: 440 ---------------------DARKILQYMTANDIVPSSKAYTGVIEAFGQA-------- 470
Query: 567 CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDV 626
L ++A+ AF M G PS +SL+ +F E+ A+L + ++G+ +
Sbjct: 471 ---ALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNR 527
Query: 627 VTYTTLMKALIRVDKFHKVPAVYEEMILSGCTPDRK 662
T+ ++A + KF + Y +M S C PD +
Sbjct: 528 DTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDER 563
Score = 151 bits (382), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 121/536 (22%), Positives = 234/536 (43%), Gaps = 53/536 (9%)
Query: 166 YSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARND-DLEKALNLMSKM 219
Y+ LI+A GR+ + + L R ++++P LTYN +I+ACAR D E L L ++M
Sbjct: 179 YTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEM 238
Query: 220 RQDGYHCDFINYSLVIQSLTRTNKID---------------------SSLLQKLYKEIEC 258
R +G D + Y+ ++ + D S L++ K
Sbjct: 239 RHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRL 298
Query: 259 DKI-ELDGQL-----------LNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAV 306
+K+ +L G++ N ++ +AK+G +AM Q G +P TY+ +
Sbjct: 299 EKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVL 358
Query: 307 ITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV 366
+ SGR + +F E+K S P YN L++ + + GY K+ + +M +
Sbjct: 359 LNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENI 418
Query: 367 LPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQ 426
PD TY +I A G E AR +L+ M + P+S Y+ ++ + ++
Sbjct: 419 EPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALV 478
Query: 427 VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
M G P ++ ++ +F + + + A R++ GI + T+N I+ +
Sbjct: 479 AFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYK 538
Query: 487 KCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVV 546
+ G+++ A + + +M++ P T ++++ ++ + M+A +LP+++
Sbjct: 539 QGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIM 598
Query: 547 TYTTLVDIYGQSGRFDDAIECLEG-LSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQ 605
Y ++ +YG++ R+DD E LE LS++ N +V + +I +D
Sbjct: 599 CYCMMLAVYGKTERWDDVNELLEEMLSNRVSNIHQV------------IGQMIKGDYDDD 646
Query: 606 RDAEAFA-VLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVPAVYEEMILSGCTPD 660
+ + VL + G + Y L+ AL + + + V E G P+
Sbjct: 647 SNWQIVEYVLDKLNSEGCGLGIRFYNALLDALWWLGQKERAARVLNEATKRGLFPE 702
Score = 136 bits (343), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 126/262 (48%), Gaps = 13/262 (4%)
Query: 408 YSRILAGYRDRGEWQRTFQVLKEMKSS-GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
++ + + RG+WQR+ ++ K M+ +P+ H Y +MI G+ L + FD M
Sbjct: 108 FALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEM 167
Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQE-R 525
S+G+ ++ LI+ + + GRY+ + EL + M+ P TYN +IN
Sbjct: 168 PSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLD 227
Query: 526 WEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTD 585
WE + L MR +G+ P++VTY TL+ + GL D+A FR M
Sbjct: 228 WEGLLGLFAEMRHEGIQPDIVTYNTLLSAC-----------AIRGLGDEAEMVFRTMNDG 276
Query: 586 GLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
G+ P + L+ FG+ +R + +L M G PD+ +Y L++A + +
Sbjct: 277 GIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEA 336
Query: 646 PAVYEEMILSGCTPDRKARAML 667
V+ +M +GCTP+ ++L
Sbjct: 337 MGVFHQMQAAGCTPNANTYSVL 358
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/407 (20%), Positives = 156/407 (38%), Gaps = 47/407 (11%)
Query: 123 AVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRS---EKL 179
++P +++L + + SI A V +Q C YS+L++ G+S + +
Sbjct: 313 SLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAG-CTPNANTYSVLLNLFGQSGRYDDV 371
Query: 180 YEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQS 237
+ FL + P TYN LI ++ + L M ++ D Y +I +
Sbjct: 372 RQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFA 431
Query: 238 LTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLS 297
+ + + +K+ + + + I + VI F +A +A+ VG +
Sbjct: 432 CGKGGLHEDA--RKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSN 489
Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
P T+ +++ + + G E+EA+ L +SG+ +NA ++ Y + G ++A
Sbjct: 490 PSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKT 549
Query: 358 VSEMERSGVLPDEHT-----------------------------------YSLLIDAYAN 382
+ME+S PDE T Y +++ Y
Sbjct: 550 YVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGK 609
Query: 383 AGRWESARIVLKEMEVSHAKPNSFIYSRILAG-YRDRGEWQRTFQVLKEMKSSGVEPDTH 441
RW+ +L+EM + + +++ G Y D WQ VL ++ S G
Sbjct: 610 TERWDDVNELLEEMLSNRVSNIHQVIGQMIKGDYDDDSNWQIVEYVLDKLNSEGCGLGIR 669
Query: 442 FYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL---IDCH 485
FYN ++D A + G+ P+ N L +D H
Sbjct: 670 FYNALLDALWWLGQKERAARVLNEATKRGLFPELFRKNKLVWSVDVH 716
>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
Length = 704
Score = 173 bits (439), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 133/524 (25%), Positives = 240/524 (45%), Gaps = 23/524 (4%)
Query: 145 LAYAVVSWLQKHNLCYS-YELLYSILIHALGRSEKLYEAFLL---SQRQRLTP--LTYNA 198
A+ V++ + K ++ Y ++IL+ L R+ + +A L +R L P +YN
Sbjct: 125 FAFGVLALMLKRGFAFNVYN--HNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNT 182
Query: 199 LISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIEC 258
+I +LEKAL L ++M+ G + + ++I + + K+D ++ KE++
Sbjct: 183 VIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAM--GFLKEMKF 240
Query: 259 DKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIE 318
+E D + +I GF G+ + G SP TY +I G+ E
Sbjct: 241 MGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKE 300
Query: 319 AEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLID 378
A +FE + E G++P Y L+ G +G K+A +++ M P+ TY+++I+
Sbjct: 301 ASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIIN 360
Query: 379 AYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM--KSSGV 436
G A +++ M+ +P++ Y+ +L G +G+ ++L M SS
Sbjct: 361 KLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYT 420
Query: 437 EPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEE 496
+PD YN +I K N LH A+ +D ++ + D +T N L++ K G ++A E
Sbjct: 421 DPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAME 480
Query: 497 LFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYG 556
L++++ + + TY MI+ + K LL MR L P+V Y L+
Sbjct: 481 LWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSL- 539
Query: 557 QSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQY 616
C EG DQA F M+ D P ++ N +I+ + A ++L
Sbjct: 540 ----------CKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVG 589
Query: 617 MKENGLKPDVVTYTTLMKALIRVDKFHKVPAVYEEMILSGCTPD 660
M GL PD+ TY+ L+ +++ + + +++M+ SG PD
Sbjct: 590 MSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPD 633
Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 170/377 (45%), Gaps = 20/377 (5%)
Query: 285 MRFLGMAQGV-------GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
MR G A GV G + + ++ L + +A ++ E++ + L P +
Sbjct: 120 MRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFS 179
Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
YN +++G+ + L+ A + +EM+ SG T+ +LIDA+ AG+ + A LKEM+
Sbjct: 180 YNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMK 239
Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
+ + +Y+ ++ G+ D GE R + E+ G P YN +I F K L
Sbjct: 240 FMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLK 299
Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
A F+ M+ G+ P+ T+ LID G+ A +L M E+ P TYNI+I
Sbjct: 300 EASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIII 359
Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
N L + D ++ M+ + P+ +TY L+ C +G D+A
Sbjct: 360 NKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGL-----------CAKGDLDEASK 408
Query: 578 AFRVMRTDG--LKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
+M D P ++ N+LI+ ++ R +A + + E D VT L+ +
Sbjct: 409 LLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNS 468
Query: 636 LIRVDKFHKVPAVYEEM 652
++ +K +++++
Sbjct: 469 TLKAGDVNKAMELWKQI 485
Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 142/302 (47%), Gaps = 16/302 (5%)
Query: 166 YSILIHALGRSEKLYEA-----FLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
Y+I+I+ L + + +A + +R R +TYN L+ DL++A L+ M
Sbjct: 355 YNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLML 414
Query: 221 QDGYHCD--FINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFA-K 277
+D + D I+Y+ +I L + N++ +L +Y ++ +K+ ++ ++++ K
Sbjct: 415 KDSSYTDPDVISYNALIHGLCKENRLHQAL--DIY-DLLVEKLGAGDRVTTNILLNSTLK 471
Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
AGD +KAM + + TY A+I +G A+ + +++ S L+P
Sbjct: 472 AGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFD 531
Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
YN LL K G L A + EM+R PD +++++ID AG +SA +L M
Sbjct: 532 YNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMS 591
Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
+ P+ F YS+++ + G +M SG EPD H + D+ KY C+
Sbjct: 592 RAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAH----ICDSVLKY-CIS 646
Query: 458 HA 459
Sbjct: 647 QG 648
Score = 92.8 bits (229), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 97/406 (23%), Positives = 169/406 (41%), Gaps = 5/406 (1%)
Query: 173 LGRSEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYS 232
L R + L++ +L + +TYN LI + L++A + M + G + Y+
Sbjct: 263 LDRGKALFDE-VLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYT 321
Query: 233 LVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQ 292
+I L K +L Q L IE D+ E + N +I K G + A+ + + +
Sbjct: 322 GLIDGLCGVGKTKEAL-QLLNLMIEKDE-EPNAVTYNIIINKLCKDGLVADAVEIVELMK 379
Query: 293 GVGLSPKTATYAAVITALSNSGRTIEA-EAVFEELKESG-LKPRTKAYNALLKGYVKMGY 350
P TY ++ L G EA + ++ LK+S P +YNAL+ G K
Sbjct: 380 KRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENR 439
Query: 351 LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSR 410
L A + + D T ++L+++ AG A + K++ S NS Y+
Sbjct: 440 LHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTA 499
Query: 411 ILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG 470
++ G+ G +L +M+ S ++P YN ++ + K L A F+ M +
Sbjct: 500 MIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDN 559
Query: 471 IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVK 530
PD +++N +ID K G AE L M G P TY+ +IN + ++
Sbjct: 560 NFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAI 619
Query: 531 RLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
M G P+ +++ G D E ++ L D+ +
Sbjct: 620 SFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDI 665
Score = 89.4 bits (220), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 150/330 (45%), Gaps = 11/330 (3%)
Query: 126 APLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA--- 182
A ++ ++ LC D A +V ++K + Y+IL+ L L EA
Sbjct: 352 AVTYNIIINKLCKDGLVAD-AVEIVELMKKRRT-RPDNITYNILLGGLCAKGDLDEASKL 409
Query: 183 --FLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSL 238
+L P ++YNALI + + L +AL++ + + D + ++++ S
Sbjct: 410 LYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNST 469
Query: 239 TRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSP 298
+ ++ ++ +L+K+I KI + +I GF K G + A L + L P
Sbjct: 470 LKAGDVNKAM--ELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQP 527
Query: 299 KTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVV 358
Y ++++L G +A +FEE++ P ++N ++ G +K G +K AE ++
Sbjct: 528 SVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLL 587
Query: 359 SEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDR 418
M R+G+ PD TYS LI+ + G + A +M S +P++ I +L +
Sbjct: 588 VGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQ 647
Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
GE + +++K++ + D ++D
Sbjct: 648 GETDKLTELVKKLVDKDIVLDKELTCTVMD 677
>sp|Q8S8P6|PP180_ARATH Pentatricopeptide repeat-containing protein At2g32630
OS=Arabidopsis thaliana GN=At2g32630 PE=3 SV=1
Length = 624
Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 109/439 (24%), Positives = 200/439 (45%), Gaps = 13/439 (2%)
Query: 198 ALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIE 257
+ A + ++ L + +M G + ++V++ L R +++ S +KL KE
Sbjct: 194 VFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKS--KKLIKEFS 251
Query: 258 CDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTI 317
I+ + N +I + K D S L + + G+ TY ++ +G+
Sbjct: 252 VKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMS 311
Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
+AE +F+E++E G++ Y +L+ + G +K A + E+ G+ P +TY LI
Sbjct: 312 DAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALI 371
Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
D G +A I++ EM+ +++ ++ GY +G + M+ G +
Sbjct: 372 DGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQ 431
Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
D N + F + A RM+ G++ T+++ LID + K G + A+ L
Sbjct: 432 ADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRL 491
Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
F EM +G P TYN+MI +Q + ++ ++L NM A G+ P+ TYT+L I+G
Sbjct: 492 FVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSL--IHG- 548
Query: 558 SGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM 617
EC+ D+A+ F M GL +++ +I+ + + EAF + M
Sbjct: 549 --------ECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEM 600
Query: 618 KENGLKPDVVTYTTLMKAL 636
K G D YT L+ ++
Sbjct: 601 KRKGYTIDNKVYTALIGSM 619
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/358 (25%), Positives = 165/358 (46%), Gaps = 2/358 (0%)
Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
TYN +I+A + D ++ M++DG + + Y+L+++ + K+ + +KL+
Sbjct: 261 TYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDA--EKLFD 318
Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
E+ IE D + +I + G+ +A GLSP + TY A+I + G
Sbjct: 319 EMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVG 378
Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
AE + E++ G+ +N L+ GY + G + +A + ME+ G D T +
Sbjct: 379 EMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCN 438
Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
+ + R++ A+ L M K ++ Y+ ++ Y G + ++ EM S
Sbjct: 439 TIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSK 498
Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
GV+P+ YNVMI + K + A M + G++PD+ T+ +LI D A
Sbjct: 499 GVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEA 558
Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
LF EM +G + TY +MI+ L + + ++ L M+ +G + YT L+
Sbjct: 559 MRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
Score = 129 bits (325), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 91/401 (22%), Positives = 170/401 (42%), Gaps = 24/401 (5%)
Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
GLS + + A R +F + +SG+K + +++G + G ++ +
Sbjct: 184 GLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKS 243
Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
+ ++ E G+ P+ +TY+ +I+AY + VLK M+ N Y+ ++
Sbjct: 244 KKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMEL 303
Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
G+ ++ EM+ G+E D H Y +I + + A FD + +G+ P
Sbjct: 304 SVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPS 363
Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
+ T+ LID K G AE L EMQ +G +N +I+ + ++ +
Sbjct: 364 SYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYD 423
Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDA------------------------IECLEG 570
M +G +V T T+ + + R+D+A + C EG
Sbjct: 424 VMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEG 483
Query: 571 LSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYT 630
++A F M + G++P+ + N +I A+ + + EA + M+ NG+ PD TYT
Sbjct: 484 NVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYT 543
Query: 631 TLMKALIRVDKFHKVPAVYEEMILSGCTPDRKARAMLRSAL 671
+L+ D + ++ EM L G + ++ S L
Sbjct: 544 SLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGL 584
>sp|Q0WMY5|PP365_ARATH Pentatricopeptide repeat-containing protein At5g04810,
chloroplastic OS=Arabidopsis thaliana GN=PPR4 PE=1 SV=1
Length = 952
Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 126/544 (23%), Positives = 237/544 (43%), Gaps = 49/544 (9%)
Query: 166 YSILIHALGRSEKLYEAFLLSQRQR---LTPLT--YNALISACARNDDLEKALNLMSKMR 220
+ +++ GR ++ A +R R +TP + Y +LI A A D+++AL+ + KM+
Sbjct: 312 FGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMK 371
Query: 221 QDGYHCDFINYSLVIQSLTRTN-------------KIDSSLLQKLY-------------- 253
++G + YS+++ ++ +I +L +Y
Sbjct: 372 EEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNME 431
Query: 254 ------KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVI 307
+E+E + I+ + + ++ G+ D K + + G +P TY +I
Sbjct: 432 RAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLI 491
Query: 308 TALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVL 367
+ G+ +A V +KE G+K K Y+ ++ G+VK+ +A V +M + G+
Sbjct: 492 NLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMK 551
Query: 368 PDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQV 427
PD Y+ +I A+ G + A +KEM+ +P + + I+ GY G+ +R+ +V
Sbjct: 552 PDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEV 611
Query: 428 LKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFK 487
M+ G P H +N +I+ + + A+ D M G+ + T+ ++ +
Sbjct: 612 FDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYAS 671
Query: 488 CGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVT 547
G +A E F +Q G TY ++ + R + + M A+ + N
Sbjct: 672 VGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFV 731
Query: 548 YTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRD 607
Y L+D + + G D E A + + M+ +G+KP S I+A +
Sbjct: 732 YNILIDGWARRG---DVWE--------AADLIQQMKKEGVKPDIHTYTSFISACSKAGDM 780
Query: 608 AEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVPAVYEEMILSGCTPDRKARAML 667
A ++ M+ G+KP++ TYTTL+K R K + YEEM G PD+ L
Sbjct: 781 NRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCL 840
Query: 668 RSAL 671
++L
Sbjct: 841 LTSL 844
Score = 144 bits (362), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 103/452 (22%), Positives = 203/452 (44%), Gaps = 21/452 (4%)
Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL-LQKLYK 254
Y+ ++ D +K L + ++++ G+ + Y +I T+ KI +L + ++ K
Sbjct: 452 YHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMK 511
Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
E + ++ + + + +I GF K D + A G+ P Y +I+A G
Sbjct: 512 E---EGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMG 568
Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
A +E+++ +P T+ + ++ GY K G ++ + V M R G +P HT++
Sbjct: 569 NMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFN 628
Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
LI+ + E A +L EM ++ N Y++I+ GY G+ + F+ +++
Sbjct: 629 GLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNE 688
Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
G++ D Y ++ K + A+A M + I ++ +N LID + G A
Sbjct: 689 GLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEA 748
Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
+L ++M++ G P TY I+ + + + M A G+ PN+ TYTTL+
Sbjct: 749 ADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKG 808
Query: 555 YGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAF--- 611
+ ++ L ++A++ + M+ G+KP + L+ + AEA+
Sbjct: 809 WARA-----------SLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYS 857
Query: 612 ---AVLQYMKENGLKPDVVTYTTLMKALIRVD 640
+ + M E GL D+ T K L +++
Sbjct: 858 GVMTICKEMVEAGLIVDMGTAVHWSKCLCKIE 889
Score = 130 bits (328), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/363 (22%), Positives = 160/363 (44%), Gaps = 11/363 (3%)
Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
P + ++ G A FE ++ G+ P ++ Y +L+ Y + +A
Sbjct: 307 PSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSC 366
Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
V +M+ G+ TYS+++ ++ AG E+A E + H N+ IY +I+ +
Sbjct: 367 VRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQ 426
Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTIT 477
+R +++EM+ G++ Y+ M+D + + F R+ G P +T
Sbjct: 427 TCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVT 486
Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
+ LI+ + K G+ +A E+ M+E G TY++MIN + + W + + +M
Sbjct: 487 YGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMV 546
Query: 538 AQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSL 597
+G+ P+V+ Y ++ + G D AI Q V + +R +P+ +
Sbjct: 547 KEGMKPDVILYNNIISAFCGMGNMDRAI--------QTVKEMQKLRH---RPTTRTFMPI 595
Query: 598 INAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVPAVYEEMILSGC 657
I+ + + + V M+ G P V T+ L+ L+ + K + +EM L+G
Sbjct: 596 IHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGV 655
Query: 658 TPD 660
+ +
Sbjct: 656 SAN 658
Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 130/310 (41%), Gaps = 58/310 (18%)
Query: 382 NAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTH 441
N W++ +++ +KP+ + ++ Y RG+ R + + M++ G+ P +
Sbjct: 290 NGDNWQAVISAFEKI----SKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSR 345
Query: 442 FYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGR----------- 490
Y +I + + A++ +M EGIE +T++ ++ K G
Sbjct: 346 IYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEA 405
Query: 491 ------------------------YDRAEELFEEMQERGYFPCTTTYNIMIN----LLGE 522
+RAE L EM+E G Y+ M++ + E
Sbjct: 406 KRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADE 465
Query: 523 QERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVM 582
++ KRL + G P VVTY L+++Y + G+ A+E RVM
Sbjct: 466 KKGLVVFKRL----KECGFTPTVVTYGCLINLYTKVGKISKALE-----------VSRVM 510
Query: 583 RTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
+ +G+K + + +IN F + + A AFAV + M + G+KPDV+ Y ++ A +
Sbjct: 511 KEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNM 570
Query: 643 HKVPAVYEEM 652
+ +EM
Sbjct: 571 DRAIQTVKEM 580
>sp|Q9FFZ2|PP402_ARATH Putative pentatricopeptide repeat-containing protein At5g36300
OS=Arabidopsis thaliana GN=At5g36300 PE=3 SV=3
Length = 330
Score = 170 bits (431), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 111/387 (28%), Positives = 179/387 (46%), Gaps = 77/387 (19%)
Query: 267 LLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEEL 326
+ N I F + G+ ++AM L +G P +Y + I L++ RT+EA+A+F E+
Sbjct: 13 MYNSWIRYFCRTGETNEAMSLLAEIHSLGSRPDPLSYVSFIETLASLRRTLEADALFHEV 72
Query: 327 KESGL--KPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAG 384
+ + YNAL+ Y+
Sbjct: 73 VRFMIYGSYSVRLYNALVSRYL-------------------------------------- 94
Query: 385 RWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYN 444
R E + V+ EM+ + NSF+Y +I+ YRD G W++ +++E++ G+ D YN
Sbjct: 95 RKEVSWRVVNEMKKRKFRLNSFVYGKIIRIYRDNGMWKKALGIVEEIREIGLPMDVEIYN 154
Query: 445 VMIDTFGKYNCLHHAMAAFDRM-LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQE 503
+IDTFGKY L + +++ S P+ TWN+LI H G D A ELF +
Sbjct: 155 SVIDTFGKYGELDEELQVLEKLQRSSDSRPNIRTWNSLIRWHCHHGAVDMALELFTMI-- 212
Query: 504 RGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDD 563
+ED+ L+G +++QG+ P+ + TL + Y Q
Sbjct: 213 ----------------------FEDIGELVGKLKSQGVAPSANLFCTLANAYAQ------ 244
Query: 564 AIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKEN-GL 622
+GL Q V ++M +G++P+ + LN LINAFG + EA ++ ++KE +
Sbjct: 245 -----QGLCKQTVKVLKMMENEGIEPNLIMLNVLINAFGTAGKHMEALSIYHHIKETVWI 299
Query: 623 KPDVVTYTTLMKALIRVDKFHKVPAVY 649
PDVVTY+TLMKA R K+ V + Y
Sbjct: 300 HPDVVTYSTLMKAFTRAKKYEMVCSFY 326
Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/348 (20%), Positives = 135/348 (38%), Gaps = 80/348 (22%)
Query: 190 RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQ---SLTRT----- 241
R++ YN+ I R + +A++L++++ G D ++Y I+ SL RT
Sbjct: 8 RISLSMYNSWIRYFCRTGETNEAMSLLAEIHSLGSRPDPLSYVSFIETLASLRRTLEADA 67
Query: 242 -------------------NKIDSSLLQK-----LYKEIECDKIELDGQLLNDVIVGFAK 277
N + S L+K + E++ K L+ + +I +
Sbjct: 68 LFHEVVRFMIYGSYSVRLYNALVSRYLRKEVSWRVVNEMKKRKFRLNSFVYGKIIRIYRD 127
Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESG-LKPRTK 336
G KA+ + + +GL Y +VI G E V E+L+ S +P +
Sbjct: 128 NGMWKKALGIVEEIREIGLPMDVEIYNSVIDTFGKYGELDEELQVLEKLQRSSDSRPNIR 187
Query: 337 AYNALLKGYVKMG-----------YLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGR 385
+N+L++ + G +D +V +++ GV P + + L +AYA G
Sbjct: 188 TWNSLIRWHCHHGAVDMALELFTMIFEDIGELVGKLKSQGVAPSANLFCTLANAYAQQGL 247
Query: 386 WESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNV 445
+ VLK ME + G+EP+ NV
Sbjct: 248 CKQTVKVLKMME-----------------------------------NEGIEPNLIMLNV 272
Query: 446 MIDTFGKYNCLHHAMAAFDRML-SEGIEPDTITWNTLIDCHFKCGRYD 492
+I+ FG A++ + + + I PD +T++TL+ + +Y+
Sbjct: 273 LINAFGTAGKHMEALSIYHHIKETVWIHPDVVTYSTLMKAFTRAKKYE 320
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 170 bits (430), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 190/411 (46%), Gaps = 11/411 (2%)
Query: 260 KIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEA 319
K+ LD +I G +AG+ K+ L G SP Y +I G +A
Sbjct: 158 KVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKA 217
Query: 320 EAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDA 379
+ +F E+ + GL + Y L+ G K G K + +M+ GV P+ +TY+ +++
Sbjct: 218 KDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQ 277
Query: 380 YANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPD 439
GR + A V EM N Y+ ++ G + +V+ +MKS G+ P+
Sbjct: 278 LCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPN 337
Query: 440 THFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFE 499
YN +ID F L A++ + S G+ P +T+N L+ + G A ++ +
Sbjct: 338 LITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVK 397
Query: 500 EMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSG 559
EM+ERG P TY I+I+ + E +L +M GL+P+V TY+ L+ +
Sbjct: 398 EMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGF---- 453
Query: 560 RFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKE 619
C++G ++A F+ M +P+ + N++I + ++ A +L+ M+E
Sbjct: 454 -------CIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEE 506
Query: 620 NGLKPDVVTYTTLMKALIRVDKFHKVPAVYEEMILSGCTPDRKARAMLRSA 670
L P+V +Y +++ L + K + + E+MI SG P +++ A
Sbjct: 507 KELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLISRA 557
Score = 86.7 bits (213), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 135/288 (46%), Gaps = 9/288 (3%)
Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
++ ++ LC + D A+ V +++ + + + Y+ LI L R KL EA + +
Sbjct: 271 YNCVMNQLCKDGRTKD-AFQVFDEMRERGVSCNI-VTYNTLIGGLCREMKLNEANKVVDQ 328
Query: 189 QR---LTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
+ + P +TYN LI L KAL+L ++ G + Y++++ R K
Sbjct: 329 MKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCR--K 386
Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
D+S K+ KE+E I+ +I FA++ + KA++ + +GL P TY
Sbjct: 387 GDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTY 446
Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
+ +I G+ EA +F+ + E +P YN ++ GY K G A ++ EME
Sbjct: 447 SVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEE 506
Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRI 411
+ P+ +Y +I+ + + A ++++M S P++ I S I
Sbjct: 507 KELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLI 554
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 169 bits (427), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 124/499 (24%), Positives = 219/499 (43%), Gaps = 61/499 (12%)
Query: 228 FINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRF 287
+++S ++ RT + + L+ K++E + I + LN +I F + A
Sbjct: 88 LVDFSRFFSAIARTKQFN--LVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSV 145
Query: 288 LGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVK 347
LG +G P T T+ +I L G+ EA + + + E+G +P YN+++ G +
Sbjct: 146 LGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICR 205
Query: 348 MGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFI 407
G A ++ +ME V D TYS +ID+ G ++A + KEME K +
Sbjct: 206 SGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVT 265
Query: 408 YSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRML 467
Y+ ++ G G+W +LK+M S + P+ +NV++D F K L A + M+
Sbjct: 266 YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI 325
Query: 468 SEGIEPDTITWNTLIDCHF------------------KCG-----------------RYD 492
+ GI P+ IT+NTL+D + KC R D
Sbjct: 326 TRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVD 385
Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
++F + +RG TY+I++ + + + + L M + G+LP+V+TY L+
Sbjct: 386 DGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILL 445
Query: 553 DIYGQSGRFDDAIE------------------------CLEGLSDQAVNAFRVMRTDGLK 588
D +G+ + A+E C G + A N F + G+K
Sbjct: 446 DGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVK 505
Query: 589 PSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVPAV 648
P+ + +I+ + +EA +L+ M+E+G P+ TY TL++A +R +
Sbjct: 506 PNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKL 565
Query: 649 YEEMILSGCTPDRKARAML 667
EEM G + D + M+
Sbjct: 566 IEEMKSCGFSADASSIKMV 584
Score = 157 bits (396), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 111/423 (26%), Positives = 191/423 (45%), Gaps = 14/423 (3%)
Query: 145 LAYAVVSWLQKHNLCYSYE---LLYSILIHALGRSEKLYEAFLLSQRQ-----RLTPLTY 196
AY+V+ + K YE ++ LI L K+ EA +L R + +TY
Sbjct: 141 FAYSVLGKVMK----LGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTY 196
Query: 197 NALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEI 256
N++++ R+ D AL+L+ KM + D YS +I SL R ID+++ L+KE+
Sbjct: 197 NSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI--SLFKEM 254
Query: 257 ECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRT 316
E I+ N ++ G KAG + L + P T+ ++ G+
Sbjct: 255 ETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKL 314
Query: 317 IEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLL 376
EA +++E+ G+ P YN L+ GY L +A ++ M R+ PD T++ L
Sbjct: 315 QEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSL 374
Query: 377 IDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGV 436
I Y R + V + + N+ YS ++ G+ G+ + ++ +EM S GV
Sbjct: 375 IKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGV 434
Query: 437 EPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEE 496
PD Y +++D L A+ F+ + ++ + + T+I+ K G+ + A
Sbjct: 435 LPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWN 494
Query: 497 LFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYG 556
LF + +G P TY +MI+ L ++ + LL M G PN TY TL+ +
Sbjct: 495 LFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHL 554
Query: 557 QSG 559
+ G
Sbjct: 555 RDG 557
Score = 147 bits (371), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 113/487 (23%), Positives = 221/487 (45%), Gaps = 23/487 (4%)
Query: 156 HNLCYSYELLYSILIHALGRSEKLYEAF-LLSQRQRL----TPLTYNALISACARNDDLE 210
HN+ Y L +I+I+ R K A+ +L + +L T+N LI +
Sbjct: 121 HNI---YTL--NIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVS 175
Query: 211 KALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLND 270
+A+ L+ +M ++G D + Y+ ++ + R+ D+SL L +++E ++ D +
Sbjct: 176 EAVVLVDRMVENGCQPDVVTYNSIVNGICRSG--DTSLALDLLRKMEERNVKADVFTYST 233
Query: 271 VIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESG 330
+I + G A+ + G+ TY +++ L +G+ + + +++
Sbjct: 234 IIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSRE 293
Query: 331 LKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESAR 390
+ P +N LL +VK G L++A + EM G+ P+ TY+ L+D Y R A
Sbjct: 294 IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEAN 353
Query: 391 IVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTF 450
+L M + P+ ++ ++ GY +V + + G+ + Y++++ F
Sbjct: 354 NMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGF 413
Query: 451 GKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCT 510
+ + A F M+S G+ PD +T+ L+D G+ ++A E+FE++Q+
Sbjct: 414 CQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGI 473
Query: 511 TTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEG 570
Y +I + + + ED L ++ +G+ PNV+TYT ++ SG C +G
Sbjct: 474 VMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMI-----SGL------CKKG 522
Query: 571 LSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYT 630
+A R M DG P++ N+LI A D + +++ MK G D +
Sbjct: 523 SLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIK 582
Query: 631 TLMKALI 637
++ L+
Sbjct: 583 MVIDMLL 589
Score = 126 bits (316), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 95/404 (23%), Positives = 186/404 (46%), Gaps = 11/404 (2%)
Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLL--- 185
++S++ +C S + LA ++ +++ N+ + YS +I +L R + A L
Sbjct: 196 YNSIVNGICRSGDT-SLALDLLRKMEERNV-KADVFTYSTIIDSLCRDGCIDAAISLFKE 253
Query: 186 --SQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
++ + + +TYN+L+ + L+ M + I +++++ + K
Sbjct: 254 METKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGK 313
Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
+ + +LYKE+ I + N ++ G+ S+A L + SP T+
Sbjct: 314 LQEA--NELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTF 371
Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
++I R + VF + + GL Y+ L++G+ + G +K AE + EM
Sbjct: 372 TSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVS 431
Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
GVLPD TY +L+D + G+ E A + ++++ S +Y+ I+ G G+ +
Sbjct: 432 HGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVED 491
Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
+ + + GV+P+ Y VMI K L A +M +G P+ T+NTLI
Sbjct: 492 AWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIR 551
Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL--GEQER 525
H + G + +L EEM+ G+ ++ ++I++L GE ++
Sbjct: 552 AHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSGELDK 595
>sp|O04504|PPR27_ARATH Pentatricopeptide repeat-containing protein At1g09820
OS=Arabidopsis thaliana GN=At1g09820 PE=2 SV=1
Length = 606
Score = 168 bits (426), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 142/559 (25%), Positives = 239/559 (42%), Gaps = 77/559 (13%)
Query: 130 HSLLKNLCSSNSSIDLAYAVVSWLQKH-NLCYSYELLYSILIHALGRSEK---------- 178
+ L + L SS DL SWL K+ ++ S EL + +L H+L +++
Sbjct: 68 NELFRQLISSELDPDLCLRYYSWLVKNSDISVSLELTFKLL-HSLANAKRYSKIRSFLDG 126
Query: 179 ------------LYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHC 226
++ A + + + + L+ A A N E + GY
Sbjct: 127 FVRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKL 186
Query: 227 DFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMR 286
++ ++ +L + N+ S+ ++ +YKE+ KI+
Sbjct: 187 SALSCKPLMIALLKENR--SADVEYVYKEMIRRKIQ------------------------ 220
Query: 287 FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYV 346
P T+ VI AL +G+ +A V E++K G P +YN L+ GY
Sbjct: 221 -----------PNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYC 269
Query: 347 KMG---YLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKP 403
K+G + A+ V+ EM + V P+ T+++LID + + V KEM KP
Sbjct: 270 KLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKP 329
Query: 404 NSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAF 463
N Y+ ++ G + G+ + +M S+GV+P+ YN +I+ F K + L A+ F
Sbjct: 330 NVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMF 389
Query: 464 DRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQ 523
+ +G P T +N LID + K G+ D L EEM+ G P TYN +I L
Sbjct: 390 GSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRN 449
Query: 524 ERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMR 583
E K+L + ++G LP++VT+ L++ Y C +G S +A + M
Sbjct: 450 GNIEAAKKLFDQLTSKG-LPDLVTFHILMEGY-----------CRKGESRKAAMLLKEMS 497
Query: 584 TDGLKPSNLALNSLINAF-GEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
GLKP +L N ++ + E A Q KE L+ +V +Y L++ + K
Sbjct: 498 KMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKL 557
Query: 643 HKVPAVYEEMILSGCTPDR 661
+ EM+ G P+R
Sbjct: 558 EDANMLLNEMLEKGLVPNR 576
Score = 134 bits (336), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 104/422 (24%), Positives = 200/422 (47%), Gaps = 18/422 (4%)
Query: 127 PLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLS 186
PL +LLK N S D+ Y +++ ++++I+AL ++ K+ +A +
Sbjct: 193 PLMIALLK----ENRSADVEYVYKEMIRRK--IQPNVFTFNVVINALCKTGKMNKARDVM 246
Query: 187 QRQRL---TP--LTYNALISACAR---NDDLEKALNLMSKMRQDGYHCDFINYSLVIQSL 238
+ ++ +P ++YN LI + N + KA ++ +M ++ + ++++I
Sbjct: 247 EDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGF 306
Query: 239 TRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSP 298
+ + + S+ K++KE+ ++ + N +I G G S+A+ G+ P
Sbjct: 307 WKDDNLPGSM--KVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQP 364
Query: 299 KTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVV 358
TY A+I + EA +F +K G P T+ YN L+ Y K+G + D +
Sbjct: 365 NLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALK 424
Query: 359 SEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDR 418
EMER G++PD TY+ LI G E+A+ + ++ S P+ + ++ GY +
Sbjct: 425 EEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQL-TSKGLPDLVTFHILMEGYCRK 483
Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG-IEPDTIT 477
GE ++ +LKEM G++P YN+++ + K L A +M E + + +
Sbjct: 484 GESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVAS 543
Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
+N L+ + + G+ + A L EM E+G P TY I+ + +Q D++ L N+
Sbjct: 544 YNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFVPDIEGHLFNVS 603
Query: 538 AQ 539
+
Sbjct: 604 TK 605
Score = 132 bits (332), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 179/370 (48%), Gaps = 15/370 (4%)
Query: 188 RQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN--- 242
R+++ P T+N +I+A + + KA ++M M+ G + ++Y+ +I +
Sbjct: 216 RRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNG 275
Query: 243 ---KIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPK 299
K D+ L KE+ + + + N +I GF K + +M+ + P
Sbjct: 276 KMYKADAVL-----KEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPN 330
Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
+Y ++I L N G+ EA ++ +++ +G++P YNAL+ G+ K LK+A +
Sbjct: 331 VISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFG 390
Query: 360 EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG 419
++ G +P Y++LIDAY G+ + + +EME P+ Y+ ++AG G
Sbjct: 391 SVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNG 450
Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWN 479
+ ++ ++ S G+ PD ++++++ + + A M G++P +T+N
Sbjct: 451 NIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYN 509
Query: 480 TLIDCHFKCGRYDRAEELFEEMQ-ERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRA 538
++ + K G A + +M+ ER +YN+++ ++ + ED LL M
Sbjct: 510 IVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLE 569
Query: 539 QGLLPNVVTY 548
+GL+PN +TY
Sbjct: 570 KGLVPNRITY 579
Score = 82.8 bits (203), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 116/270 (42%), Gaps = 14/270 (5%)
Query: 404 NSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAF 463
NS I ++ Y + ++ F+ K G + ++ K N +
Sbjct: 152 NSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVY 211
Query: 464 DRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN---LL 520
M+ I+P+ T+N +I+ K G+ ++A ++ E+M+ G P +YN +I+ L
Sbjct: 212 KEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKL 271
Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
G + +L M + PN+ T+ L+D + + +++ + + DQ V
Sbjct: 272 GGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDV---- 327
Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVD 640
KP+ ++ NSLIN + +EA ++ M G++P+++TY L+ + D
Sbjct: 328 -------KPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKND 380
Query: 641 KFHKVPAVYEEMILSGCTPDRKARAMLRSA 670
+ ++ + G P + ML A
Sbjct: 381 MLKEALDMFGSVKGQGAVPTTRMYNMLIDA 410
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 168 bits (426), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 114/436 (26%), Positives = 196/436 (44%), Gaps = 16/436 (3%)
Query: 203 CARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIE 262
C + DD A +L +M Q ++++ V+ + + NK D ++ LY ++E I
Sbjct: 57 CIKFDD---AFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFD--IVIYLYHKMENLGIS 111
Query: 263 LDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAV 322
D +I F + S A+ LG +G P T +++ R EA ++
Sbjct: 112 HDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSL 171
Query: 323 FEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYAN 382
+ + G P YN ++ G K L +A V ME+ G+ D TY+ LI +N
Sbjct: 172 VDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSN 231
Query: 383 AGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHF 442
+GRW A +L++M PN ++ ++ + G + KEM V P+
Sbjct: 232 SGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFT 291
Query: 443 YNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQ 502
YN +I+ F + CL A FD M+S+G PD +T+NTLI K R + +LF EM
Sbjct: 292 YNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMT 351
Query: 503 ERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFD 562
+G TYN +I+ + + +++ M G+ P++VTY L+D +G+ +
Sbjct: 352 YQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIE 411
Query: 563 DAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGL 622
A+ +E L ++ + N +I + EA+ + + + G+
Sbjct: 412 KALVMVEDLQKSEMDV-----------DIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGV 460
Query: 623 KPDVVTYTTLMKALIR 638
KPD + Y T++ L R
Sbjct: 461 KPDAIAYITMISGLCR 476
Score = 135 bits (341), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 102/418 (24%), Positives = 189/418 (45%), Gaps = 11/418 (2%)
Query: 147 YAVVSWL--QKHNLCYSYELL-YSILIHALGRSEKLYEAFLLSQRQ-----RLTPLTYNA 198
+ +V +L + NL S++L ++ILIH R +L A L + R + +T +
Sbjct: 95 FDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGS 154
Query: 199 LISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIEC 258
L++ + + ++A++L+ M G+ + + Y+ VI L + ++++L +++ +E
Sbjct: 155 LLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNAL--EVFYCMEK 212
Query: 259 DKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIE 318
I D N +I G + +G + A R L + P + A+I G +E
Sbjct: 213 KGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLE 272
Query: 319 AEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLID 378
A +++E+ + P YN+L+ G+ G L DA+++ M G PD TY+ LI
Sbjct: 273 ARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLIT 332
Query: 379 AYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEP 438
+ + R E + EM ++F Y+ ++ GY G+ +V M GV P
Sbjct: 333 GFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSP 392
Query: 439 DTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELF 498
D YN+++D + A+ + + ++ D IT+N +I + + A LF
Sbjct: 393 DIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLF 452
Query: 499 EEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT-TLVDIY 555
+ +G P Y MI+ L + + +L M+ G +P+ Y TL D Y
Sbjct: 453 RSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDHY 510
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 168 bits (425), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 126/504 (25%), Positives = 227/504 (45%), Gaps = 34/504 (6%)
Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL--LQKLY 253
+N L+SA A+ + E ++L +M+ G D YS+ I R +++ +L L K+
Sbjct: 86 FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMM 145
Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
K E D L+ ++ G+ + S A+ + +G P T T+ +I L
Sbjct: 146 KL----GYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLH 201
Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
+ EA A+ +++ + G +P Y ++ G K G + A ++++ME + + + +
Sbjct: 202 NKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIF 261
Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
+ +ID+ E A + EME +PN Y+ ++ + G W ++L M
Sbjct: 262 NTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLE 321
Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
+ P+ +N +ID F K L A + M+ I+PDTIT+N LI+ R D
Sbjct: 322 KKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDE 381
Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
A+++F+ M + P TYN +IN + +R ED L M +GL+ N VTYTT++
Sbjct: 382 AKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQ 441
Query: 554 IYGQSGRFDDAIE------------------------CLEGLSDQAVNAFRVMRTDGLKP 589
+ Q+G D A C G D A+ F+ ++ ++
Sbjct: 442 GFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMEL 501
Query: 590 SNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVPAVY 649
+ N++I + + EA+ + + +KPDVVTY T++ L + ++
Sbjct: 502 NIFIYNTMIEGMCKAGKVGEAWDLFCSLS---IKPDVVTYNTMISGLCSKRLLQEADDLF 558
Query: 650 EEMILSGCTPDRKA-RAMLRSALR 672
+M G P+ ++R+ LR
Sbjct: 559 RKMKEDGTLPNSGTYNTLIRANLR 582
Score = 152 bits (383), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 134/552 (24%), Positives = 248/552 (44%), Gaps = 31/552 (5%)
Query: 103 LASSPSSLNRVEFKLAESYRAVPAPLWH-----SLLKNLCSSNSSIDLAYAVVSWLQKHN 157
L S+ + +N+ E ++ + + H S+ N S + LA AV++ + K
Sbjct: 89 LLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMK-- 146
Query: 158 LCYSYELL-YSILIHALGRSEKLYEAFLLSQRQ-----RLTPLTYNALISACARNDDLEK 211
L Y +++ S L++ S+++ +A L + + T+ LI ++ +
Sbjct: 147 LGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASE 206
Query: 212 ALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDV 271
A+ L+ +M Q G D + Y V+ L + ID +L L ++E +I+ + + N +
Sbjct: 207 AVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL--NLLNKMEAARIKANVVIFNTI 264
Query: 272 IVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGL 331
I K A+ + G+ P TY ++I L N GR +A + + E +
Sbjct: 265 IDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKI 324
Query: 332 KPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARI 391
P +NAL+ + K G L +AE + EM + + PD TY+LLI+ + R + A+
Sbjct: 325 NPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQ 384
Query: 392 VLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFG 451
+ K M PN Y+ ++ G+ + ++ +EM G+ +T Y +I F
Sbjct: 385 MFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFF 444
Query: 452 KYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTT 511
+ A F +M+S + D +T++ L+ G+ D A +F+ +Q+
Sbjct: 445 QAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIF 504
Query: 512 TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGL 571
YN MI + + + + L ++ + P+VVTY T++ SG C + L
Sbjct: 505 IYNTMIEGMCKAGKVGEAWDLFCSLSIK---PDVVTYNTMI-----SGL------CSKRL 550
Query: 572 SDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTT 631
+A + FR M+ DG P++ N+LI A D A + +++ M+ +G D T +
Sbjct: 551 LQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISL 610
Query: 632 LMKALI--RVDK 641
+ L R+DK
Sbjct: 611 VTNMLHDGRLDK 622
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/380 (23%), Positives = 176/380 (46%), Gaps = 24/380 (6%)
Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
P + +++A++ + ++ E+++ G+ Y+ + + + L A V
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
+++M + G PD T S L++ Y ++ R A ++ +M KP++F ++ ++ G
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTIT 477
+ ++ +M G +PD Y +++ K + A+ ++M + I+ + +
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVI 260
Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
+NT+ID K + A +LF EM+ +G P TYN +IN L RW D RLL NM
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNML 320
Query: 538 AQGLLPNVVTYTTLVDIYGQSGRFDDAIE------------------------CLEGLSD 573
+ + PNVVT+ L+D + + G+ +A + C+ D
Sbjct: 321 EKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLD 380
Query: 574 QAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
+A F+ M + P+ N+LIN F + +R + + + M + GL + VTYTT++
Sbjct: 381 EAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTII 440
Query: 634 KALIRVDKFHKVPAVYEEMI 653
+ + V+++M+
Sbjct: 441 QGFFQAGDCDSAQMVFKQMV 460
Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 163/354 (46%), Gaps = 17/354 (4%)
Query: 310 LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS---EMERSGV 366
LS+ + +A +F ++ +S P +N LL KM E V+S +M+ G+
Sbjct: 58 LSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKF---ELVISLGEQMQTLGI 114
Query: 367 LPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQ 426
D +TYS+ I+ + + A VL +M +P+ S +L GY
Sbjct: 115 SHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVA 174
Query: 427 VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
++ +M G +PDT + +I +N A+A D+M+ G +PD +T+ T+++
Sbjct: 175 LVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLC 234
Query: 487 KCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVV 546
K G D A L +M+ +N +I+ L + E L M +G+ PNVV
Sbjct: 235 KRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVV 294
Query: 547 TYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQR 606
TY +L++ GR+ DA L + ++ +N P+ + N+LI+AF ++ +
Sbjct: 295 TYNSLINCLCNYGRWSDASRLLSNMLEKKIN-----------PNVVTFNALIDAFFKEGK 343
Query: 607 DAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVPAVYEEMILSGCTPD 660
EA + + M + + PD +TY L+ ++ + +++ M+ C P+
Sbjct: 344 LVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPN 397
Score = 63.2 bits (152), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 85/184 (46%), Gaps = 27/184 (14%)
Query: 503 ERGYFPCTTTYN-IMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
ER + + Y I+ N L + + +D L G+M P++V + L+ + +F
Sbjct: 40 ERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKF 99
Query: 562 DDAIECLE-----GLSDQA------VNAF--------------RVMRTDGLKPSNLALNS 596
+ I E G+S +N F ++M+ G +P + L+S
Sbjct: 100 ELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKL-GYEPDIVTLSS 158
Query: 597 LINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVPAVYEEMILSG 656
L+N + +R ++A A++ M E G KPD T+TTL+ L +K + A+ ++M+ G
Sbjct: 159 LLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG 218
Query: 657 CTPD 660
C PD
Sbjct: 219 CQPD 222
>sp|Q9SV46|PP282_ARATH Pentatricopeptide repeat-containing protein At3g54980,
mitochondrial OS=Arabidopsis thaliana GN=At3g54980 PE=2
SV=1
Length = 851
Score = 167 bits (424), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 129/544 (23%), Positives = 254/544 (46%), Gaps = 20/544 (3%)
Query: 123 AVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA 182
A P L +SL C + +A +++ +++ LC + Y+ +I A + + +A
Sbjct: 264 AEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDA 323
Query: 183 F-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQS 237
+LS + + +LI+ +N+DL AL L KM ++G + + +S++I+
Sbjct: 324 IRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEW 383
Query: 238 LTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLS 297
+ +++ +L + YK++E + ++ +I G+ K +A++ + GL+
Sbjct: 384 FRKNGEMEKAL--EFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLA 441
Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
+++ L G+T EA + +++ G+ P +YN ++ G+ + + A V
Sbjct: 442 -NVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIV 500
Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
S + G+ P+ +TYS+LID ++A V+ M S+ + N +Y I+ G
Sbjct: 501 FSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCK 560
Query: 418 RGEWQRTFQVLKEM-KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTI 476
G+ + ++L M + + YN +ID F K + A+AA++ M GI P+ I
Sbjct: 561 VGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVI 620
Query: 477 TWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM 536
T+ +L++ K R D+A E+ +EM+ +G Y +I+ ++ E L +
Sbjct: 621 TYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSEL 680
Query: 537 RAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNS 596
+GL P+ Y +L+ + G A++ ++ M DGL+ +
Sbjct: 681 LEEGLNPSQPIYNSLISGFRNLGNMVAALDL-----------YKKMLKDGLRCDLGTYTT 729
Query: 597 LINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVPAVYEEMILSG 656
LI+ +D A + M+ GL PD + YT ++ L + +F KV ++EEM +
Sbjct: 730 LIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNN 789
Query: 657 CTPD 660
TP+
Sbjct: 790 VTPN 793
Score = 155 bits (393), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 137/530 (25%), Positives = 236/530 (44%), Gaps = 33/530 (6%)
Query: 164 LLYSILIHALGRSEKLYEAFLLSQRQRLTPL------TYNALISACARNDDLEKALNLMS 217
LLYS+ + A ++ L A L + + L TY ++I A + +++ A+ L
Sbjct: 269 LLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKD 328
Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDV-----I 272
+M DG + + + +I + N + S+L+ L+ DK+E +G N V I
Sbjct: 329 EMLSDGISMNVVAATSLITGHCKNNDLVSALV--LF-----DKMEKEGPSPNSVTFSVLI 381
Query: 273 VGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLK 332
F K G+ KA+ F + +GL+P +I + EA +F+E E+GL
Sbjct: 382 EWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGL- 440
Query: 333 PRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIV 392
N +L K G +A ++S+ME G+ P+ +Y+ ++ + + ARIV
Sbjct: 441 ANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIV 500
Query: 393 LKEMEVSHAKPNSFIYSRILAG-YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFG 451
+ KPN++ YS ++ G +R+ E Q +V+ M SS +E + Y +I+
Sbjct: 501 FSNILEKGLKPNNYTYSILIDGCFRNHDE-QNALEVVNHMTSSNIEVNGVVYQTIINGLC 559
Query: 452 KYNCLHHAMAAFDRMLSEG-IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCT 510
K A M+ E + +++N++ID FK G D A +EEM G P
Sbjct: 560 KVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNV 619
Query: 511 TTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEG 570
TY ++N L + R + + M+ +G+ ++ Y L+D + C
Sbjct: 620 ITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGF-----------CKRS 668
Query: 571 LSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYT 630
+ A F + +GL PS NSLI+ F A + + M ++GL+ D+ TYT
Sbjct: 669 NMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYT 728
Query: 631 TLMKALIRVDKFHKVPAVYEEMILSGCTPDRKARAMLRSALRYMKQTLKT 680
TL+ L++ +Y EM G PD ++ + L Q +K
Sbjct: 729 TLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKV 778
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 153/323 (47%), Gaps = 1/323 (0%)
Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
TY+ LI C RN D + AL +++ M + + Y +I L + + S + L
Sbjct: 515 TYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQT-SKARELLAN 573
Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
IE ++ + N +I GF K G+ A+ G G+SP TY +++ L +
Sbjct: 574 MIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNN 633
Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
R +A + +E+K G+K AY AL+ G+ K ++ A + SE+ G+ P + Y+
Sbjct: 634 RMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYN 693
Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
LI + N G +A + K+M + + Y+ ++ G G ++ EM++
Sbjct: 694 SLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAV 753
Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
G+ PD Y V+++ K + F+ M + P+ + +N +I H++ G D A
Sbjct: 754 GLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEA 813
Query: 495 EELFEEMQERGYFPCTTTYNIMI 517
L +EM ++G P T++I++
Sbjct: 814 FRLHDEMLDKGILPDGATFDILV 836
Score = 133 bits (335), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 97/391 (24%), Positives = 176/391 (45%), Gaps = 7/391 (1%)
Query: 174 GRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINY 231
G++++ E + + + P ++YN ++ R +++ A + S + + G + Y
Sbjct: 457 GKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTY 516
Query: 232 SLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLG-M 290
S++I R + ++L ++ + IE++G + +I G K G SKA L M
Sbjct: 517 SILIDGCFRNHDEQNAL--EVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANM 574
Query: 291 AQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGY 350
+ L +Y ++I G A A +EE+ +G+ P Y +L+ G K
Sbjct: 575 IEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNR 634
Query: 351 LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSR 410
+ A + EM+ GV D Y LID + ESA + E+ P+ IY+
Sbjct: 635 MDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNS 694
Query: 411 ILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG 470
+++G+R+ G + K+M G+ D Y +ID K L A + M + G
Sbjct: 695 LISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVG 754
Query: 471 IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVK 530
+ PD I + +++ K G++ + ++FEEM++ P YN +I + ++
Sbjct: 755 LVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAF 814
Query: 531 RLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
RL M +G+LP+ T+ LV GQ G
Sbjct: 815 RLHDEMLDKGILPDGATFDILVS--GQVGNL 843
Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 132/577 (22%), Positives = 244/577 (42%), Gaps = 37/577 (6%)
Query: 132 LLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYEL---LYSILIHALGRSEKLYEAF-LLSQ 187
LL S+++ +A +VS L + +E+ ++ L++A + + A +++Q
Sbjct: 129 LLIRYVSTSNPTPMASVLVSKLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQ 188
Query: 188 RQRLTPLTY----NALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
L + + N +SA + + L +A L S+M G D + L++++ R K
Sbjct: 189 MLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEK 248
Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFL-GMAQGVGLSPKTAT 302
+ L+ L + IE E D L + + K D + A L M + P T
Sbjct: 249 -PAEALEVLSRAIE-RGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQET 306
Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
Y +VI A G +A + +E+ G+ A +L+ G+ K L A + +ME
Sbjct: 307 YTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKME 366
Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
+ G P+ T+S+LI+ + G E A K+MEV P+ F I+ G+ + +
Sbjct: 367 KEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHE 426
Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
++ E +G+ + N ++ K A +M S GI P+ +++N ++
Sbjct: 427 EALKLFDESFETGL-ANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVM 485
Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
H + D A +F + E+G P TY+I+I+ ++ ++ +M + +
Sbjct: 486 LGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIE 545
Query: 543 PNVVTYTTLVDIYGQSGRFDDAIECL-------------------------EGLSDQAVN 577
N V Y T+++ + G+ A E L EG D AV
Sbjct: 546 VNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVA 605
Query: 578 AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
A+ M +G+ P+ + SL+N ++ R +A + MK G+K D+ Y L+
Sbjct: 606 AYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFC 665
Query: 638 RVDKFHKVPAVYEEMILSGCTPDRKARAMLRSALRYM 674
+ A++ E++ G P + L S R +
Sbjct: 666 KRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNL 702
Score = 125 bits (315), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 88/381 (23%), Positives = 171/381 (44%), Gaps = 3/381 (0%)
Query: 197 NALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEI 256
N ++S + ++A L+SKM G + ++Y+ V+ R +D L + ++ I
Sbjct: 447 NTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMD--LARIVFSNI 504
Query: 257 ECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRT 316
++ + + +I G + D A+ + + Y +I L G+T
Sbjct: 505 LEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQT 564
Query: 317 IEA-EAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
+A E + ++E L +YN+++ G+ K G + A EM +G+ P+ TY+
Sbjct: 565 SKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTS 624
Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
L++ R + A + EM+ K + Y ++ G+ R + + E+ G
Sbjct: 625 LMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEG 684
Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
+ P YN +I F + A+ + +ML +G+ D T+ TLID K G A
Sbjct: 685 LNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILAS 744
Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
EL+ EMQ G P Y +++N L ++ ++ V ++ M+ + PNV+ Y ++ +
Sbjct: 745 ELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGH 804
Query: 556 GQSGRFDDAIECLEGLSDQAV 576
+ G D+A + + D+ +
Sbjct: 805 YREGNLDEAFRLHDEMLDKGI 825
>sp|Q9LMY5|PPR41_ARATH Putative pentatricopeptide repeat-containing protein At1g13630
OS=Arabidopsis thaliana GN=At1g13630 PE=2 SV=3
Length = 826
Score = 167 bits (423), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 121/469 (25%), Positives = 227/469 (48%), Gaps = 21/469 (4%)
Query: 192 TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQK 251
T L ++ L+ +R ++ +L ++ KM+ + +Y+ V+ T+K +
Sbjct: 165 TGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDK-----MWD 219
Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
+YKEI+ DK E + V+ G + A+ FL ++ + P ++ ++++
Sbjct: 220 VYKEIK-DKNE---HTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYC 275
Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
G A++ F + + GL P ++N L+ G +G + +A + S+M + GV PD
Sbjct: 276 KLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSV 335
Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
TY++L + G A V+++M P+ Y+ +L G G +LK+M
Sbjct: 336 TYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDM 395
Query: 432 KSSGVEPDTHF-YNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGR 490
S G E ++ +VM+ K + A++ F++M ++G+ PD + ++ +I K G+
Sbjct: 396 LSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGK 455
Query: 491 YDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT 550
+D A L++EM ++ P + T+ ++ L ++ + + LL ++ + G ++V Y
Sbjct: 456 FDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNI 515
Query: 551 LVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEA 610
++D Y +SG C+E +A+ F+V+ G+ PS NSLI + + Q AEA
Sbjct: 516 VIDGYAKSG-------CIE----EALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEA 564
Query: 611 FAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVPAVYEEMILSGCTP 659
+L +K GL P VV+YTTLM A + + EM G P
Sbjct: 565 RKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPP 613
Score = 143 bits (361), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/458 (24%), Positives = 195/458 (42%), Gaps = 63/458 (13%)
Query: 231 YSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGM 290
YS V+ L R K++ ++L + E I N ++ G+ K G A F
Sbjct: 232 YSTVVDGLCRQQKLEDAVL--FLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCT 289
Query: 291 AQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGY 350
GL P ++ +I L G EA + ++ + G++P + YN L KG+ +G
Sbjct: 290 VLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGM 349
Query: 351 LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFI-YS 409
+ A V+ +M G+ PD TY++L+ G + ++LK+M + NS I S
Sbjct: 350 ISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCS 409
Query: 410 RILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSE 469
+L+G G + +MK+ G+ PD Y+++I K A+ +D M +
Sbjct: 410 VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK 469
Query: 470 GIEP-----------------------------------DTITWNTLIDCHFKCGRYDRA 494
I P D + +N +ID + K G + A
Sbjct: 470 RILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEA 529
Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
ELF+ + E G P T+N +I + + + +++L ++ GL P+VV+YTTL+D
Sbjct: 530 LELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDA 589
Query: 555 YGQSGRFDDAIECLEGLSDQAVNAFRV-MRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
Y G + ++++ R M+ +G+ P+N+ + + + V
Sbjct: 590 YANCG------------NTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHV 637
Query: 614 LQY------------MKENGLKPDVVTYTTLMKALIRV 639
L+ M+ G+ PD +TY T+++ L RV
Sbjct: 638 LRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRV 675
Score = 127 bits (319), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 116/523 (22%), Positives = 220/523 (42%), Gaps = 66/523 (12%)
Query: 166 YSILIHALGRSEKLYEAFLL---SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
YS ++ L R +KL +A L S+ + + P +++N+++S + ++ A + +
Sbjct: 232 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVL 291
Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
+ G +++++I L I +L +L ++ +E D N + GF G
Sbjct: 292 KCGLVPSVYSHNILINGLCLVGSIAEAL--ELASDMNKHGVEPDSVTYNILAKGFHLLGM 349
Query: 281 ASKAMRFLGMAQGVGLSPKTATY------------------------------------A 304
S A + GLSP TY +
Sbjct: 350 ISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCS 409
Query: 305 AVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERS 364
+++ L +GR EA ++F ++K GL P AY+ ++ G K+G A ++ EM
Sbjct: 410 VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK 469
Query: 365 GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRT 424
+LP+ T+ L+ G AR +L + S + +Y+ ++ GY G +
Sbjct: 470 RILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEA 529
Query: 425 FQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDC 484
++ K + +G+ P +N +I + K + A D + G+ P +++ TL+D
Sbjct: 530 LELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDA 589
Query: 485 HFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGE-----------QER-WEDVKRL 532
+ CG +EL EM+ G P TY+++ L +ER +E K+
Sbjct: 590 YANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQG 649
Query: 533 LGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNL 592
L +M ++G+ P+ +TY T++ + A LE +M++ L S+
Sbjct: 650 LRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLE-----------IMKSRNLDASSA 698
Query: 593 ALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
N LI++ +A + + ++E + YTTL+KA
Sbjct: 699 TYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKA 741
Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/397 (24%), Positives = 167/397 (42%), Gaps = 51/397 (12%)
Query: 197 NALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEI 256
+ ++S + +++AL+L ++M+ DG D + YS+VI L + K D +L LY E+
Sbjct: 409 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALW--LYDEM 466
Query: 257 ECDK----------------------IE--------------LDGQLLNDVIVGFAKAGD 280
CDK +E LD L N VI G+AK+G
Sbjct: 467 -CDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGC 525
Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
+A+ + G++P AT+ ++I + EA + + +K GL P +Y
Sbjct: 526 IEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTT 585
Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKE----- 395
L+ Y G K + + EM+ G+ P TYS++ + E+ VL+E
Sbjct: 586 LMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEK 645
Query: 396 -------MEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
ME P+ Y+ I+ F L+ MKS ++ + YN++ID
Sbjct: 646 CKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILID 705
Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
+ Y + A + + + + + TLI H G + A +LF ++ RG+
Sbjct: 706 SLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNV 765
Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNV 545
Y+ +IN L + + K M +QG+ P++
Sbjct: 766 SIRDYSAVINRLCRRHLVNESKFFFCLMLSQGISPDL 802
Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 151/354 (42%), Gaps = 60/354 (16%)
Query: 322 VFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYA 381
+ +++K+ L T++YN++L + + + D V E++ +EHTYS ++D
Sbjct: 188 ILKKMKDQNLNVSTQSYNSVLYHFRETDKMWD---VYKEIKD----KNEHTYSTVVDGLC 240
Query: 382 NAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTH 441
+ E A + L+ E P+ ++ I++GY G
Sbjct: 241 RQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLG---------------------- 278
Query: 442 FYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM 501
+D A + F +L G+ P + N LI+ G A EL +M
Sbjct: 279 ----FVDM---------AKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDM 325
Query: 502 QERGYFPCTTTYNIM---INLLGE-QERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
+ G P + TYNI+ +LLG WE ++ +M +GL P+V+TYT L+ Q
Sbjct: 326 NKHGVEPDSVTYNILAKGFHLLGMISGAWEVIR----DMLDKGLSPDVITYTILLCGQCQ 381
Query: 558 SGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM 617
G D + L+ D F + + + P ++ L+ L R EA ++ M
Sbjct: 382 LGNIDMGLVLLK---DMLSRGFEL---NSIIPCSVMLSGLCKT----GRIDEALSLFNQM 431
Query: 618 KENGLKPDVVTYTTLMKALIRVDKFHKVPAVYEEMILSGCTPDRKARAMLRSAL 671
K +GL PD+V Y+ ++ L ++ KF +Y+EM P+ + L L
Sbjct: 432 KADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGL 485
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/396 (22%), Positives = 170/396 (42%), Gaps = 58/396 (14%)
Query: 132 LLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELL-YSILIHALGRSEKLYEAFLLSQR-- 188
+L LC + ID A ++ + ++ L S +L+ YSI+IH L + K A L
Sbjct: 411 MLSGLCKTGR-IDEALSLFNQMKADGL--SPDLVAYSIVIHGLCKLGKFDMALWLYDEMC 467
Query: 189 -QRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKID 245
+R+ P T+ AL+ + L +A +L+ + G D + Y++VI ++ I+
Sbjct: 468 DKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIE 527
Query: 246 SSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAA 305
+L +L+K + I N +I G+ K + ++A + L + + GL+P +Y
Sbjct: 528 EAL--ELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTT 585
Query: 306 VITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSE----- 360
++ A +N G T + + E+K G+ P Y+ + KG + ++ V+ E
Sbjct: 586 LMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEK 645
Query: 361 -------MERSGVLPDEHTYSLLIDAYANAGRWESARIVL-----KEMEVSHA------- 401
ME G+ PD+ TY+ +I A + L + ++ S A
Sbjct: 646 CKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILID 705
Query: 402 ---------KPNSFIYS--------------RILAGYRDRGEWQRTFQVLKEMKSSGVEP 438
K +SFIYS ++ + +G+ + ++ ++ G
Sbjct: 706 SLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNV 765
Query: 439 DTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
Y+ +I+ + + ++ + F MLS+GI PD
Sbjct: 766 SIRDYSAVINRLCRRHLVNESKFFFCLMLSQGISPD 801
Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 121/271 (44%), Gaps = 28/271 (10%)
Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQ-------VLKEMKSSGV---EPDTHFYNVMIDT 449
H+ ++ + S +LAG R E Q + L E+ S+ E +++++
Sbjct: 116 HSSFSTLLVSHVLAGQRRFKELQVILEQLLQEEGTLCELLSNSFRKWESTGLVWDMLLFL 175
Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
+ + ++ +M + + T ++N+++ HF+ D+ ++++E++++
Sbjct: 176 SSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLY-HFR--ETDKMWDVYKEIKDKN---- 228
Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
TY+ +++ L Q++ ED L + + P+VV++ +++ Y C
Sbjct: 229 EHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGY-----------CKL 277
Query: 570 GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
G D A + F + GL PS + N LIN AEA + M ++G++PD VTY
Sbjct: 278 GFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTY 337
Query: 630 TTLMKALIRVDKFHKVPAVYEEMILSGCTPD 660
L K + V +M+ G +PD
Sbjct: 338 NILAKGFHLLGMISGAWEVIRDMLDKGLSPD 368
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.132 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 241,518,692
Number of Sequences: 539616
Number of extensions: 10020373
Number of successful extensions: 54748
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 449
Number of HSP's successfully gapped in prelim test: 118
Number of HSP's that attempted gapping in prelim test: 41109
Number of HSP's gapped (non-prelim): 3556
length of query: 680
length of database: 191,569,459
effective HSP length: 124
effective length of query: 556
effective length of database: 124,657,075
effective search space: 69309333700
effective search space used: 69309333700
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)